locus-tag	class	description
DA787_00005	COG0593	it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids
DA787_00010	COG0592	DNA-directed DNA polymerase activity
DA787_00015	COG2501	S4 domain
DA787_00020	COG1195	it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
DA787_00030	COG0187	DNA topoisomerase II activity
DA787_00035	COG0188	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
DA787_00070	COG0516	GMP reductase activity
DA787_00070	COG0517	IMP dehydrogenase activity
DA787_00075	COG1686	Belongs to the peptidase S11 family
DA787_00080	COG0214	Catalyzes the formation of pyridoxal 5'-phosphate from ribose 5-phosphate (RBP), glyceraldehyde 3-phosphate (G3P) and ammonia. The ammonia is provided by the PdxT subunit. Can also use ribulose 5-phosphate and dihydroxyacetone phosphate as substrates, resulting from enzyme-catalyzed isomerization of RBP and G3P, respectively
DA787_00085	COG0311	Catalyzes the hydrolysis of glutamine to glutamate and ammonia as part of the biosynthesis of pyridoxal 5'-phosphate. The resulting ammonia molecule is channeled to the active site of PdxS
DA787_00090	COG0172	Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec)
DA787_00100	COG1428	Deoxynucleoside kinase
DA787_00105	COG1428	Deoxynucleoside kinase
DA787_00110	COG3858	chitin binding
DA787_00110	COG1388	LysM domain
DA787_00115	COG1335	isochorismatase
DA787_00120	COG0590	tRNA wobble adenosine to inosine editing
DA787_00130	COG2812	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
DA787_00135	COG0718	Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection
DA787_00140	COG0353	May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO
DA787_00185	COG4915	5-bromo-4-chloroindolyl phosphate hydrolysis protein
DA787_00190	COG3853	Toxic anion resistance protein (TelA)
DA787_00195	COG1982	Orn Lys Arg decarboxylase major
DA787_00200	COG0125	Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
DA787_00205	COG3870	Protein conserved in bacteria
DA787_00210	COG1728	Protein conserved in bacteria
DA787_00215	COG0470	DNA polymerase III
DA787_00220	COG1774	PSP1 C-terminal conserved region
DA787_00225	COG4467	Involved in initiation control of chromosome replication
DA787_00230	COG4123	Specifically methylates the adenine in position 37 of tRNA(1)(Val) (anticodon cmo5UAC)
DA787_00235	COG2827	Endonuclease containing a URI domain
DA787_00240	COG0313	Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
DA787_00245	COG2002	toxin-antitoxin pair type II binding
DA787_00250	COG0143	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
DA787_00250	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
DA787_00255	COG0084	hydrolase, TatD family'
DA787_00260	COG3584	3D domain protein
DA787_00260	COG3583	domain protein
DA787_00265	COG1658	Required for correct processing of both the 5' and 3' ends of 5S rRNA precursor. Cleaves both sides of a double-stranded region yielding mature 5S rRNA in one step
DA787_00270	COG0030	16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase activity
DA787_00280	COG4466	Protein conserved in bacteria
DA787_00290	COG1947	Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol
DA787_00295	COG0503	Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
DA787_00300	COG0251	oxidation-reduction process
DA787_00305	COG2088	sporulation resulting in formation of a cellular spore
DA787_00310	COG1207	Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain
DA787_00315	COG0462	Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
DA787_00320	COG1825	This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance
DA787_00325	COG0193	aminoacyl-tRNA hydrolase activity
DA787_00335	COG1197	Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
DA787_00340	COG2002	toxin-antitoxin pair type II binding
DA787_00345	COG2244	polysaccharide biosynthetic process
DA787_00350	COG3956	TIGRFAM MazG family protein
DA787_00355	COG1188	Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit, (S4 paralog))
DA787_00370	COG2919	Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic
DA787_00375	COG1098	S1 RNA binding domain
DA787_00390	COG2208	phosphoserine phosphatase activity
DA787_00395	COG2304	oxidoreductase activity
DA787_00400	COG0515	serine threonine protein kinase
DA787_00405	COG0037	tRNA processing
DA787_00415	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
DA787_00420	COG1521	Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis
DA787_00425	COG1281	Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress
DA787_00430	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
DA787_00435	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
DA787_00440	COG0147	Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
DA787_00445	COG0512	Glutamine amidotransferase of anthranilate synthase
DA787_00450	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
DA787_00455	COG0294	Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives
DA787_00460	COG1539	Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin
DA787_00465	COG0801	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
DA787_00470	COG1396	sequence-specific DNA binding
DA787_00475	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
DA787_00480	COG1190	Belongs to the class-II aminoacyl-tRNA synthetase family
DA787_00560	COG4463	regulation of RNA biosynthetic process
DA787_00565	COG3880	PFAM UvrB UvrC protein
DA787_00570	COG3869	Catalyzes the specific phosphorylation of arginine residues in
DA787_00575	COG0542	response to heat
DA787_00580	COG1066	DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function
DA787_00585	COG1623	Has also diadenylate cyclase activity, catalyzing the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP). c- di-AMP acts as a signaling molecule that couples DNA integrity with progression of sporulation. The rise in c-di-AMP level generated by DisA while scanning the chromosome, operates as a positive signal that advances sporulation
DA787_00590	COG4956	integral membrane protein (PIN domain superfamily)
DA787_00595	COG1211	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity
DA787_00600	COG0245	2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase activity
DA787_00605	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
DA787_00615	COG1045	serine acetyltransferase
DA787_00620	COG0215	cysteine-tRNA ligase activity
DA787_00625	COG1939	Involved in correct processing of both the 5' and 3' ends of 23S rRNA precursor. Processes 30S rRNA precursor transcript even in absence of ribonuclease 3 (Rnc)
DA787_00630	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
DA787_00635	COG3688	RNA-binding protein containing a PIN domain
DA787_00640	COG1595	DNA-templated transcription, initiation
DA787_00645	COG0267	Belongs to the bacterial ribosomal protein bL33 family
DA787_00650	COG0690	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
DA787_00655	COG0250	Participates in transcription elongation, termination and antitermination
DA787_00660	COG0080	Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors
DA787_00665	COG0081	regulation of translation
DA787_00670	COG0244	Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors
DA787_00675	COG0222	ribosome binding
DA787_00680	COG2813	Specifically methylates the guanine in position
DA787_00685	COG0085	RNA polymerase activity
DA787_00690	COG0086	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
DA787_00695	COG1358	cellular component organization or biogenesis
DA787_00700	COG0048	Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit
DA787_00705	COG0049	tRNA binding
DA787_00710	COG0480	Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
DA787_00715	COG0050	This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
DA787_00720	COG0596	Alpha beta hydrolase
DA787_00725	COG0051	transcription antitermination factor activity, RNA binding
DA787_00730	COG0087	One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit
DA787_00735	COG0088	Forms part of the polypeptide exit tunnel
DA787_00740	COG0089	rRNA binding
DA787_00745	COG0090	One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity
DA787_00750	COG0185	Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA
DA787_00755	COG0091	The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome
DA787_00760	COG0092	Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation
DA787_00765	COG0197	Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs
DA787_00770	COG0255	Belongs to the universal ribosomal protein uL29 family
DA787_00775	COG0186	One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA
DA787_00780	COG0093	Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome
DA787_00790	COG0094	This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits
DA787_00800	COG0096	One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit
DA787_00805	COG0097	This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center
DA787_00810	COG0256	This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance
DA787_00815	COG0098	Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body
DA787_00820	COG1841	ribosomal large subunit assembly
DA787_00825	COG0200	Binds to the 23S rRNA
DA787_00830	COG0201	protein transport
DA787_00835	COG0563	adenylate kinase activity
DA787_00840	COG0024	Methionine aminopeptidase
DA787_00845	COG2163	COG2163 Ribosomal protein L14E L6E L27E
DA787_00850	COG0361	One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex
DA787_00855	COG0257	Belongs to the bacterial ribosomal protein bL36 family
DA787_00860	COG0099	Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits
DA787_00865	COG0100	Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome
DA787_00870	COG0202	RNA polymerase activity
DA787_00875	COG0203	ribosomal protein L17
DA787_00880	COG1122	ATPase activity
DA787_00885	COG1122	ATPase activity
DA787_00890	COG0619	Transmembrane (T) component of an energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
DA787_00895	COG0101	tRNA pseudouridine synthase activity
DA787_00900	COG0102	This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly
DA787_00905	COG0103	maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
DA787_00910	COG2226	methyltransferase
DA787_00920	COG0860	N-Acetylmuramoyl-L-alanine amidase
DA787_00925	COG0489	protein tyrosine kinase activity
DA787_00935	COG2194	sulfuric ester hydrolase activity
DA787_00940	COG0726	polysaccharide deacetylase
DA787_01025	COG0659	secondary active sulfate transmembrane transporter activity
DA787_01030	COG0385	Bile acid
DA787_01035	COG2819	hydrolase of the alpha beta superfamily
DA787_01040	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
DA787_01045	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
DA787_01050	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
DA787_01055	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
DA787_01055	COG2207	Transcriptional regulator
DA787_01060	COG3876	Protein conserved in bacteria
DA787_01065	COG1472	Belongs to the glycosyl hydrolase 3 family
DA787_01070	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
DA787_01075	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
DA787_01075	COG1263	PTS System
DA787_01080	COG1737	Transcriptional regulator
DA787_01085	COG2103	Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6- phosphate and D-lactate
DA787_01090	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
DA787_01095	COG1683	Conserved Protein
DA787_01125	COG1595	DNA-templated transcription, initiation
DA787_01130	COG5662	AntiSigma factor
DA787_01135	COG1624	Catalyzes the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria
DA787_01140	COG4856	YbbR-like protein
DA787_01145	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
DA787_01150	COG0449	glutamine-fructose-6-phosphate transaminase (isomerizing) activity
DA787_01160	COG0122	3-methyladenine DNA glycosylase 8-oxoguanine DNA glycosylase
DA787_01165	COG2169	Transcriptional regulator
DA787_01170	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
DA787_01175	COG1009	NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit
DA787_01180	COG3002	Belongs to the UPF0753 family
DA787_01185	COG0288	reversible hydration of carbon dioxide
DA787_01195	COG5609	conserved protein (DUF2294)
DA787_01200	COG0640	Transcriptional regulator
DA787_01205	COG2814	Major facilitator Superfamily
DA787_01210	COG0449	glutamine-fructose-6-phosphate transaminase (isomerizing) activity
DA787_01220	COG0535	radical SAM domain protein
DA787_01225	COG1266	CAAX protease self-immunity
DA787_01230	COG1131	(ABC) transporter
DA787_01240	COG1413	lyase activity
DA787_01245	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
DA787_01250	COG0596	Alpha beta hydrolase
DA787_01255	COG0745	RESPONSE REGULATOR receiver
DA787_01260	COG0642	Histidine kinase
DA787_01270	COG0515	serine threonine protein kinase
DA787_01285	COG1113	amino acid transport
DA787_01300	COG2602	Beta-lactamase
DA787_01305	COG2124	cytochrome p450
DA787_01315	COG0531	amino acid
DA787_01320	COG0584	glycerophosphoryl diester phosphodiesterase
DA787_01325	COG2271	Major facilitator Superfamily
DA787_01340	COG0456	acetyltransferase
DA787_01340	COG1846	Transcriptional regulator
DA787_01345	COG2271	Major facilitator Superfamily
DA787_01355	COG3409	Peptidoglycan-binding domain 1 protein
DA787_01360	COG0697	spore germination
DA787_01365	COG1917	Cupin 2, conserved barrel domain protein
DA787_01365	COG2207	Transcriptional regulator
DA787_01370	COG0027	Involved in the de novo purine biosynthesis. Catalyzes the transfer of formate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR). Formate is provided by PurU via hydrolysis of 10-formyl-tetrahydrofolate
DA787_01375	COG3591	Belongs to the peptidase S1B family
DA787_01385	COG0596	Alpha beta hydrolase
DA787_01390	COG1183	phosphatidylcholine synthase activity
DA787_01395	COG0586	Pfam SNARE associated Golgi protein
DA787_01400	COG0688	phosphatidylethanolamine metabolic process
DA787_01410	COG2312	Erythromycin esterase
DA787_01415	COG2207	Transcriptional regulator
DA787_01425	COG1301	dicarboxylic acid transport
DA787_01430	COG2190	(PTS) system
DA787_01430	COG1263	PTS System
DA787_01430	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
DA787_01435	COG0363	glucosamine-6-phosphate deaminase activity
DA787_01450	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
DA787_01455	COG0833	amino acid
DA787_01460	COG2040	homocysteine
DA787_01470	COG1115	amino acid carrier protein
DA787_01475	COG2066	Belongs to the glutaminase family
DA787_01480	COG4191	Histidine kinase
DA787_01485	COG0784	Response regulator, receiver
DA787_01495	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
DA787_01500	COG1012	belongs to the aldehyde dehydrogenase family
DA787_01505	COG2271	Major facilitator Superfamily
DA787_01510	COG4948	Mandelate Racemase Muconate Lactonizing
DA787_01515	COG2186	Transcriptional regulator
DA787_01520	COG2721	sulfolactate sulfo-lyase activity
DA787_01525	COG3173	Aminoglycoside phosphotransferase
DA787_01535	COG0697	spore germination
DA787_01540	COG0745	RESPONSE REGULATOR receiver
DA787_01545	COG2205	protein histidine kinase activity
DA787_01550	COG1131	(ABC) transporter
DA787_01570	COG3773	Cell wall hydrolase
DA787_01575	COG2304	oxidoreductase activity
DA787_01585	COG3540	Alkaline phosphatase
DA787_01590	COG1826	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
DA787_01595	COG0805	protein transport
DA787_01600	COG2039	Removes 5-oxoproline from various penultimate amino acid residues except L-proline
DA787_01605	COG0520	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
DA787_01610	COG0477	Major facilitator Superfamily
DA787_01615	COG1309	transcriptional regulator
DA787_01620	COG0252	asparaginase activity
DA787_01625	COG1075	acetyltransferases and hydrolases with the alpha beta hydrolase fold
DA787_01630	COG1714	RDD family
DA787_01635	COG1405	negative regulation of cell septum assembly
DA787_01635	COG3012	SEC-C Motif Domain Protein
DA787_01640	COG3290	protein histidine kinase activity
DA787_01645	COG3279	Response regulator of the LytR AlgR family
DA787_01650	COG4555	ABC transporter
DA787_01655	COG1668	transmembrane transport
DA787_01660	COG0667	Aldo Keto reductase
DA787_01675	COG1595	DNA-templated transcription, initiation
DA787_01680	COG1595	DNA-templated transcription, initiation
DA787_01685	COG1876	peptidase activity
DA787_01690	COG0457	Tetratricopeptide repeat
DA787_01695	COG1028	Short-chain dehydrogenase reductase Sdr
DA787_01700	COG0366	Alpha amylase catalytic
DA787_01705	COG0803	Belongs to the bacterial solute-binding protein 9 family
DA787_01710	COG1121	(ABC) transporter
DA787_01715	COG1108	ABC-type Mn2 Zn2 transport systems permease components
DA787_01720	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
DA787_01725	COG2310	stress, protein
DA787_01730	COG2310	stress, protein
DA787_01735	COG2310	stress, protein
DA787_01740	COG0861	Integral membrane protein TerC family
DA787_01750	COG3853	Toxic anion resistance protein (TelA)
DA787_01755	COG0477	Major facilitator Superfamily
DA787_01765	COG2814	Major facilitator Superfamily
DA787_01770	COG0640	Transcriptional regulator
DA787_01775	COG0517	IMP dehydrogenase activity
DA787_01775	COG4175	Glycine betaine
DA787_01780	COG4176	ABC-type proline glycine betaine transport system permease component
DA787_01785	COG2113	Glycine betaine
DA787_01790	COG1473	amidohydrolase
DA787_01795	COG1288	antiporter activity
DA787_01805	COG0366	Alpha amylase catalytic
DA787_01810	COG0039	L-malate dehydrogenase activity
DA787_01815	COG1620	l-lactate permease
DA787_01820	COG2814	Major facilitator Superfamily
DA787_01825	COG1846	Transcriptional regulator
DA787_01830	COG1280	lysine exporter protein (LysE YggA)
DA787_01835	COG3403	YqcI/YcgG family
DA787_01840	COG1113	amino acid transport
DA787_01845	COG3665	Urea carboxylase-associated protein
DA787_01850	COG0171	NAD+ synthase (glutamine-hydrolyzing) activity
DA787_01855	COG1660	Displays ATPase and GTPase activities
DA787_01865	COG0703	Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate
DA787_01870	COG2226	methyltransferase
DA787_01875	COG0583	DNA-binding transcription factor activity
DA787_01880	COG3458	cephalosporin-C deacetylase activity
DA787_01885	COG3541	Predicted nucleotidyltransferase
DA787_01890	COG0506	proline dehydrogenase activity
DA787_01895	COG1012	belongs to the aldehyde dehydrogenase family
DA787_01900	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
DA787_01905	COG2508	Transcriptional regulator
DA787_01910	COG3689	TIGRFAM TIGR03943 family protein
DA787_01915	COG0701	Predicted permease
DA787_01920	COG2267	carboxylic ester hydrolase activity
DA787_01925	COG0492	ferredoxin-NADP+ reductase activity
DA787_01930	COG1587	Uroporphyrinogen-III synthase
DA787_01930	COG0007	Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme
DA787_01935	COG2146	nitrite reductase [NAD(P)H] activity
DA787_01940	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
DA787_01945	COG0243	molybdopterin cofactor binding
DA787_01950	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
DA787_01955	COG2223	nitrite transmembrane transporter activity
DA787_01960	COG1469	GTP cyclohydrolase I activity
DA787_01965	COG1376	ErfK ybiS ycfS ynhG family protein
DA787_01975	COG0523	cobalamin synthesis protein
DA787_01980	COG0765	amino acid transport
DA787_01985	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
DA787_01995	COG1714	RDD family
DA787_02005	COG2723	6-phospho-beta-galactosidase activity
DA787_02015	COG3209	COG3209 Rhs family protein
DA787_02020	COG0840	transmembrane signaling receptor activity
DA787_02020	COG3290	protein histidine kinase activity
DA787_02025	COG0794	Belongs to the SIS family. GutQ KpsF subfamily
DA787_02030	COG0269	3-dehydro-L-gulonate-6-phosphate decarboxylase activity
DA787_02035	COG1733	regulation of RNA biosynthetic process
DA787_02040	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
DA787_02045	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
DA787_02050	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
DA787_02055	COG3208	Thioesterase involved in non-ribosomal peptide biosynthesis
DA787_02060	COG2814	Major facilitator Superfamily
DA787_02070	COG0697	spore germination
DA787_02075	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
DA787_02085	COG2364	Membrane
DA787_02090	COG1126	abc transporter atp-binding protein
DA787_02095	COG0765	amino acid transport
DA787_02100	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
DA787_02105	COG0583	DNA-binding transcription factor activity
DA787_02110	COG0163	prenyltransferase activity
DA787_02115	COG0043	3-octaprenyl-4-hydroxybenzoate carboxy-lyase activity
DA787_02130	COG0596	Alpha beta hydrolase
DA787_02135	COG3104	oligopeptide transport
DA787_02140	COG5434	Belongs to the glycosyl hydrolase 28 family
DA787_02150	COG0697	spore germination
DA787_02160	COG1457	Belongs to the purine-cytosine permease (2.A.39) family
DA787_02165	COG1136	(ABC) transporter
DA787_02170	COG0577	efflux transmembrane transporter activity
DA787_02175	COG0745	RESPONSE REGULATOR receiver
DA787_02180	COG3850	Histidine kinase
DA787_02180	COG5002	protein histidine kinase activity
DA787_02185	COG0457	Tetratricopeptide repeat
DA787_02205	COG0527	aspartate kinase activity
DA787_02210	COG4606	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
DA787_02215	COG4605	iron ion homeostasis
DA787_02220	COG4604	ABC transporter, ATP-binding protein
DA787_02225	COG4607	ABC-type enterochelin transport system periplasmic component
DA787_02230	COG2814	Major facilitator Superfamily
DA787_02235	COG1309	transcriptional regulator
DA787_02240	COG0778	Nitroreductase
DA787_02245	COG1359	(4S)-4-hydroxy-5-phosphonooxypentane-2,3-dione isomerase activity
DA787_02250	COG0640	Transcriptional regulator
DA787_02255	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
DA787_02260	COG0160	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
DA787_02265	COG1012	belongs to the aldehyde dehydrogenase family
DA787_02270	COG4975	Glucose uptake
DA787_02275	COG1028	Short-chain dehydrogenase reductase Sdr
DA787_02280	COG4549	nuclear export factor GLE1
DA787_02285	COG1276	copper resistance
DA787_02285	COG2372	response to copper ion
DA787_02290	COG1349	DNA-binding transcription factor activity
DA787_02300	COG2213	PTS system mannitol-specific
DA787_02305	COG4668	phosphoenolpyruvate-dependent sugar phosphotransferase system
DA787_02310	COG0246	Mannitol dehydrogenase
DA787_02315	COG0473	3-isopropylmalate dehydrogenase activity
DA787_02320	COG0681	Belongs to the peptidase S26 family
DA787_02325	COG0412	Dienelactone hydrolase
DA787_02330	COG0764	3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity
DA787_02340	COG0561	phosphatase activity
DA787_02345	COG1540	5-oxoprolinase (ATP-hydrolyzing) activity
DA787_02350	COG1914	H( )-stimulated, divalent metal cation uptake system
DA787_02355	COG4336	lyase activity
DA787_02360	COG2049	5-oxoprolinase (ATP-hydrolyzing) activity
DA787_02365	COG1984	allophanate hydrolase subunit 2
DA787_02370	COG1414	Transcriptional regulator
DA787_02375	COG2755	lipolytic protein G-D-S-L family
DA787_02385	COG2329	Antibiotic biosynthesis monooxygenase
DA787_02390	COG0768	penicillin binding
DA787_02395	COG4989	oxidoreductase activity
DA787_02400	COG3711	transcriptional antiterminator
DA787_02405	COG0318	PFAM AMP-dependent synthetase and ligase
DA787_02410	COG2226	methyltransferase
DA787_02415	COG1028	Short-chain dehydrogenase reductase Sdr
DA787_02420	COG1917	Cupin 2, conserved barrel domain protein
DA787_02425	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
DA787_02430	COG3871	stress protein (general stress protein 26)
DA787_02440	COG2814	Major facilitator Superfamily
DA787_02445	COG1522	sequence-specific DNA binding
DA787_02450	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
DA787_02450	COG0551	DNA topoisomerase type I activity
DA787_02455	COG3405	Belongs to the glycosyl hydrolase 8 (cellulase D) family
DA787_02460	COG3706	GGDEF domain
DA787_02465	COG5298	Protein conserved in bacteria
DA787_02470	COG1215	transferase activity, transferring glycosyl groups
DA787_02480	COG0531	amino acid
DA787_02485	COG0494	nUDIX hydrolase
DA787_02490	COG0028	Belongs to the TPP enzyme family
DA787_02505	COG1914	H( )-stimulated, divalent metal cation uptake system
DA787_02510	COG2261	transglycosylase associated protein
DA787_02515	COG4876	unkown
DA787_02520	COG2217	Heavy metal translocating P-type atpase
DA787_02525	COG3729	General stress protein
DA787_02530	COG0662	Cupin 2, conserved barrel domain protein
DA787_02535	COG2329	Antibiotic biosynthesis monooxygenase
DA787_02540	COG3546	catalase activity
DA787_02545	COG1638	TRAP-type C4-dicarboxylate transport system periplasmic component
DA787_02550	COG3290	protein histidine kinase activity
DA787_02555	COG4565	transcriptional regulatory protein
DA787_02560	COG1301	dicarboxylic acid transport
DA787_02565	COG0628	permease
DA787_02570	COG1131	(ABC) transporter
DA787_02575	COG1277	ABC-type transport system involved in multi-copper enzyme maturation permease component
DA787_02585	COG1960	acyl-CoA dehydrogenase activity
DA787_02600	COG0053	Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family
DA787_02605	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
DA787_02610	COG1181	Belongs to the D-alanine--D-alanine ligase family
DA787_02615	COG0770	UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity
DA787_02625	COG0513	Belongs to the DEAD box helicase family
DA787_02630	COG3402	PFAM membrane-flanked domain
DA787_02635	COG3428	Bacterial PH domain
DA787_02645	COG0705	Rhomboid family
DA787_02650	COG0736	holo-[acyl-carrier-protein] synthase activity
DA787_02655	COG2834	Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane)
DA787_02660	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
DA787_02665	COG0864	Transcriptional regulator
DA787_02670	COG2337	Toxic component of a toxin-antitoxin (TA) module
DA787_02675	COG1366	Belongs to the anti-sigma-factor antagonist family
DA787_02680	COG1366	Belongs to the anti-sigma-factor antagonist family
DA787_02685	COG2172	sigma factor antagonist activity
DA787_02690	COG2208	phosphoserine phosphatase activity
DA787_02695	COG1366	Belongs to the anti-sigma-factor antagonist family
DA787_02700	COG2172	sigma factor antagonist activity
DA787_02705	COG1191	sigma factor activity
DA787_02710	COG2208	phosphoserine phosphatase activity
DA787_02725	COG1673	EVE domain
DA787_02730	COG1846	Transcriptional regulator
DA787_02735	COG2183	response to ionizing radiation
DA787_02745	COG3091	SprT-like family
DA787_02785	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
DA787_02790	COG1522	sequence-specific DNA binding
DA787_02795	COG1522	sequence-specific DNA binding
DA787_02800	COG1335	isochorismatase
DA787_02805	COG2220	Zn-dependent hydrolases of the beta-lactamase fold
DA787_02810	COG2814	Major facilitator Superfamily
DA787_02830	COG0693	protein deglycase activity
DA787_02835	COG1278	Cold shock
DA787_02840	COG1329	Transcriptional regulator
DA787_02855	COG2207	Transcriptional regulator
DA787_02855	COG1917	Cupin 2, conserved barrel domain protein
DA787_02860	COG0697	spore germination
DA787_02865	COG2207	Transcriptional regulator
DA787_02865	COG3708	Transcriptional regulator
DA787_02870	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
DA787_02875	COG0477	Major facilitator Superfamily
DA787_02885	COG4430	Bacteriocin-protection, YdeI or OmpD-Associated
DA787_02895	COG0697	spore germination
DA787_02900	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
DA787_02905	COG2030	dehydratase
DA787_02910	COG3545	Serine hydrolase
DA787_02915	COG1733	regulation of RNA biosynthetic process
DA787_02920	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
DA787_02925	COG1733	regulation of RNA biosynthetic process
DA787_02930	COG2249	NAD(P)H dehydrogenase (quinone) activity
DA787_02935	COG2814	Major facilitator Superfamily
DA787_02940	COG1309	transcriptional regulator
DA787_02950	COG0640	Transcriptional regulator
DA787_02955	COG1055	Involved in arsenical resistance. Thought to form the channel of an arsenite pump
DA787_02965	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
DA787_02970	COG0697	spore germination
DA787_02975	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
DA787_02980	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
DA787_02985	COG0640	Transcriptional regulator
DA787_02990	COG2128	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
DA787_03005	COG4585	Histidine kinase
DA787_03010	COG2197	response regulator
DA787_03015	COG2409	Drug exporters of the RND superfamily
DA787_03020	COG0596	Alpha beta hydrolase
DA787_03025	COG1811	Na channel or pump
DA787_03030	COG0789	Transcriptional regulator
DA787_03030	COG4978	Transcriptional regulator
DA787_03035	COG0053	Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family
DA787_03040	COG0778	Nitroreductase
DA787_03045	COG0346	lactoylglutathione lyase activity
DA787_03050	COG2259	Doxx family
DA787_03055	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
DA787_03070	COG2323	membrane
DA787_03075	COG2323	membrane
DA787_03080	COG0071	Belongs to the small heat shock protein (HSP20) family
DA787_03095	COG1309	transcriptional regulator
DA787_03105	COG0456	acetyltransferase
DA787_03115	COG1113	amino acid transport
DA787_03120	COG2318	DinB family
DA787_03125	COG1846	Transcriptional regulator
DA787_03130	COG1033	growth of symbiont in host cell
DA787_03130	COG2409	Drug exporters of the RND superfamily
DA787_03135	COG0778	Nitroreductase
DA787_03140	COG1846	Transcriptional regulator
DA787_03145	COG2814	Major facilitator Superfamily
DA787_03150	COG0730	response to heat
DA787_03155	COG1802	Transcriptional regulator
DA787_03160	COG3858	chitin binding
DA787_03160	COG1388	LysM domain
DA787_03165	COG1819	glycosyl
DA787_03175	COG1785	Belongs to the alkaline phosphatase family
DA787_03180	COG5646	InterPro IPR014922
DA787_03190	COG0454	-acetyltransferase
DA787_03195	COG1078	dGTPase activity
DA787_03200	COG1388	LysM domain
DA787_03205	COG2814	Major facilitator Superfamily
DA787_03210	COG1440	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
DA787_03215	COG1447	Phosphotransferase system cellobiose-specific component IIA
DA787_03220	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
DA787_03225	COG2723	6-phospho-beta-galactosidase activity
DA787_03230	COG2188	Transcriptional regulator
DA787_03235	COG1940	carbohydrate kinase activity
DA787_03240	COG1482	cell wall glycoprotein biosynthetic process
DA787_03245	COG4124	Belongs to the glycosyl hydrolase 26 family
DA787_03290	COG0611	Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1
DA787_03295	COG0802	atpase or kinase
DA787_03300	COG1214	PFAM Peptidase M22, glycoprotease
DA787_03305	COG0456	acetyltransferase
DA787_03310	COG0533	Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction
DA787_03315	COG0488	(ABC) transporter
DA787_03320	COG0315	cyclic pyranopterin monophosphate synthase activity
DA787_03325	COG2344	Modulates transcription in response to changes in cellular NADH NAD( ) redox state
DA787_03330	COG1826	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
DA787_03335	COG0805	protein transport
DA787_03345	COG1266	CAAX protease self-immunity
DA787_03350	COG0234	Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter
DA787_03355	COG0459	protein refolding
DA787_03370	COG3378	Phage plasmid primase P4 family
DA787_03385	COG0270	DNA (cytosine-5-)-methyltransferase activity
DA787_03390	COG0270	DNA (cytosine-5-)-methyltransferase activity
DA787_03410	COG1401	restriction endodeoxyribonuclease activity
DA787_03435	COG1073	alpha beta
DA787_03440	COG0457	Tetratricopeptide repeat
DA787_03445	COG1063	alcohol dehydrogenase
DA787_03450	COG2211	Major facilitator Superfamily
DA787_03455	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
DA787_03460	COG1842	Phage shock protein A
DA787_03465	COG1198	Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
DA787_03470	COG1512	COG1512 Beta-propeller domains of methanol dehydrogenase type
DA787_03475	COG4260	virion core protein, lumpy skin disease virus
DA787_03485	COG2814	Major facilitator Superfamily
DA787_03490	COG1063	alcohol dehydrogenase
DA787_03495	COG0797	Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides
DA787_03500	COG0823	Involved in the tonB-independent uptake of proteins
DA787_03515	COG2267	carboxylic ester hydrolase activity
DA787_03525	COG2132	Multicopper oxidase
DA787_03530	COG1113	amino acid transport
DA787_03540	COG0053	Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family
DA787_03545	COG0714	Associated with various cellular activities
DA787_03550	COG1721	protein (some members contain a von Willebrand factor type A (vWA) domain
DA787_03555	COG1305	Transglutaminase-like
DA787_03560	COG0518	GMP synthase (glutamine-hydrolyzing) activity
DA787_03560	COG0519	Catalyzes the synthesis of GMP from XMP
DA787_03565	COG2252	PERMEase
DA787_03570	COG3064	Membrane
DA787_03580	COG4843	Uncharacterized protein conserved in bacteria (DUF2179)
DA787_03590	COG0041	Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR)
DA787_03595	COG0026	Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR)
DA787_03600	COG0015	Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
DA787_03605	COG0152	phosphoribosylaminoimidazolesuccinocarboxamide synthase activity
DA787_03610	COG1828	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
DA787_03615	COG0047	phosphoribosylformylglycinamidine synthase activity
DA787_03620	COG0046	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
DA787_03625	COG0034	Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine
DA787_03630	COG0150	phosphoribosylformylglycinamidine cyclo-ligase activity
DA787_03635	COG0299	Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate
DA787_03640	COG0138	bifunctional purine biosynthesis protein purh
DA787_03645	COG0151	Belongs to the GarS family
DA787_03650	COG1522	sequence-specific DNA binding
DA787_03655	COG0531	amino acid
DA787_03665	COG1001	Belongs to the metallo-dependent hydrolases superfamily. Adenine deaminase family
DA787_03670	COG1470	cell adhesion involved in biofilm formation
DA787_03675	COG4496	protein, YerC YecD
DA787_03680	COG0069	glutamate synthase activity
DA787_03685	COG1646	35 carbon atoms) to the C3 hydroxyl of sn-glycerol-1-phosphate (G1P), producing heptaprenylglyceryl phosphate (HepGP). This reaction is an ether-bond-formation step in the biosynthesis of archaea-type G1P-based membrane lipids found in Bacillales
DA787_03690	COG0210	DNA helicase
DA787_03695	COG0272	DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
DA787_03700	COG4851	CamS sex pheromone cAM373 precursor
DA787_03705	COG2334	A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response
DA787_03710	COG1285	pathogenesis
DA787_03715	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
DA787_03720	COG0721	Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
DA787_03725	COG0154	amidase activity
DA787_03730	COG0064	Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
DA787_03735	COG1309	transcriptional regulator
DA787_03740	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
DA787_03745	COG1597	lipid kinase activity
DA787_03750	COG2265	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
DA787_03755	COG1961	COG1961 Site-specific recombinases, DNA invertase Pin homologs
DA787_03760	COG1961	COG1961 Site-specific recombinases, DNA invertase Pin homologs
DA787_03765	COG1002	Type II restriction enzyme, methylase subunits
DA787_03770	COG1061	Type III restriction enzyme res subunit
DA787_03775	COG0226	Part of the ABC transporter complex PstSACB involved in phosphate import
DA787_03795	COG5444	nuclease activity
DA787_03800	COG3391	amine dehydrogenase activity
DA787_03805	COG0457	Tetratricopeptide repeat
DA787_03815	COG0217	transcriptional regulatory protein
DA787_03825	COG1309	transcriptional regulator
DA787_03830	COG3631	Ketosteroid isomerase-related protein
DA787_03835	COG0702	epimerase
DA787_03850	COG3546	catalase activity
DA787_03855	COG0454	-acetyltransferase
DA787_03865	COG5578	integral membrane protein
DA787_03870	COG2972	Histidine kinase
DA787_03875	COG2207	Transcriptional regulator
DA787_03875	COG4753	response regulator
DA787_03880	COG1653	transport
DA787_03885	COG1175	transmembrane transport
DA787_03890	COG0395	ABC-type sugar transport system, permease component
DA787_03895	COG4225	unsaturated rhamnogalacturonyl hydrolase activity
DA787_03900	COG2207	Transcriptional regulator
DA787_03905	COG2755	lipolytic protein G-D-S-L family
DA787_03915	COG5578	integral membrane protein
DA787_03920	COG3401	FG-GAP repeat protein
DA787_03925	COG3401	FG-GAP repeat protein
DA787_03935	COG1874	Beta-galactosidase
DA787_03945	COG1653	transport
DA787_03950	COG4209	transmembrane transport
DA787_03955	COG0395	ABC-type sugar transport system, permease component
DA787_03960	COG1486	melibiose metabolic process
DA787_03965	COG2323	membrane
DA787_03970	COG2329	Antibiotic biosynthesis monooxygenase
DA787_03975	COG0346	lactoylglutathione lyase activity
DA787_03990	COG5583	Uncharacterized small protein (DUF2292)
DA787_03995	COG0670	Belongs to the BI1 family
DA787_04000	COG0697	spore germination
DA787_04005	COG1846	Transcriptional regulator
DA787_04010	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
DA787_04020	COG2124	cytochrome p450
DA787_04020	COG0369	Component of the sulfite reductase complex that catalyzes the 6-electron reduction of sulfite to sulfide. This is one of several activities required for the biosynthesis of L- cysteine from sulfate. The flavoprotein component catalyzes the electron flow from NADPH - FAD - FMN to the hemoprotein component
DA787_04025	COG1368	sulfuric ester hydrolase activity
DA787_04030	COG1208	COG1208 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis translation initiation factor 2B, gamma epsilon subunits eIF-2Bgamma eIF-2Bepsilon
DA787_04035	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
DA787_04040	COG1442	glycosyl transferase family 8
DA787_04045	COG1216	Glycosyl transferase, family 2
DA787_04050	COG1442	glycosyl transferase family 8
DA787_04055	COG2223	nitrite transmembrane transporter activity
DA787_04060	COG1011	Hydrolase
DA787_04065	COG0531	amino acid
DA787_04070	COG1012	belongs to the aldehyde dehydrogenase family
DA787_04075	COG0840	transmembrane signaling receptor activity
DA787_04080	COG0488	(ABC) transporter
DA787_04090	COG0789	Transcriptional regulator
DA787_04095	COG2814	Major facilitator Superfamily
DA787_04110	COG0488	(ABC) transporter
DA787_04115	COG0513	Belongs to the DEAD box helicase family
DA787_04120	COG0456	acetyltransferase
DA787_04125	COG2130	NADP-dependent
DA787_04135	COG2211	Major facilitator Superfamily
DA787_04140	COG1262	PFAM Formylglycine-generating sulfatase enzyme
DA787_04145	COG1120	ATPase activity
DA787_04150	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
DA787_04155	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
DA787_04160	COG4594	ABC-type Fe3 -citrate transport system, periplasmic component
DA787_04175	COG3866	Pectate lyase
DA787_04180	COG0471	metal ion transport
DA787_04185	COG3290	protein histidine kinase activity
DA787_04190	COG4565	transcriptional regulatory protein
DA787_04195	COG3181	Tripartite tricarboxylate transporter family receptor
DA787_04200	COG2851	Citrate transporter
DA787_04205	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
DA787_04210	COG4362	Belongs to the NOS family. Bacterial NOS oxygenase subfamily
DA787_04215	COG1254	Belongs to the acylphosphatase family
DA787_04220	COG2258	MOSC domain
DA787_04240	COG0024	Methionine aminopeptidase
DA787_04245	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
DA787_04245	COG1263	PTS System
DA787_04250	COG1368	sulfuric ester hydrolase activity
DA787_04265	COG1115	amino acid carrier protein
DA787_04270	COG0531	amino acid
DA787_04285	COG0697	spore germination
DA787_04290	COG1263	PTS System
DA787_04290	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
DA787_04295	COG0366	Alpha amylase catalytic
DA787_04300	COG2188	Transcriptional regulator
DA787_04305	COG0778	Nitroreductase
DA787_04310	COG0737	Belongs to the 5'-nucleotidase family
DA787_04315	COG0693	protein deglycase activity
DA787_04320	COG2814	Major facilitator Superfamily
DA787_04325	COG4840	Belongs to the UPF0435 family
DA787_04330	COG0394	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
DA787_04335	COG4980	gas vesicle protein
DA787_04340	COG1295	ribonuclease BN
DA787_04345	COG0477	Major facilitator Superfamily
DA787_04350	COG0387	Pfam Sodium calcium exchanger
DA787_04360	COG0668	transmembrane transport
DA787_04365	COG0535	radical SAM domain protein
DA787_04375	COG0726	polysaccharide deacetylase
DA787_04380	COG2084	Dehydrogenase
DA787_04385	COG0598	Magnesium transport protein CorA
DA787_04390	COG0122	3-methyladenine DNA glycosylase 8-oxoguanine DNA glycosylase
DA787_04395	COG2265	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
DA787_04405	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
DA787_04410	COG4637	Psort location Cytoplasmic, score
DA787_04420	COG1071	oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor
DA787_04425	COG0022	dehydrogenase e1 component
DA787_04430	COG0508	dehydrogenase complex catalyzes the overall conversion of
DA787_04435	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
DA787_04440	COG3284	Transcriptional regulator
DA787_04450	COG1742	UPF0060 membrane protein
DA787_04475	COG4842	Belongs to the WXG100 family
DA787_04480	COG1486	melibiose metabolic process
DA787_04485	COG1737	Transcriptional regulator
DA787_04490	COG1263	PTS System
DA787_04490	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
DA787_04495	COG1132	(ABC) transporter
DA787_04500	COG1132	(ABC) transporter
DA787_04505	COG2259	Doxx family
DA787_04510	COG2514	catechol 2,3-dioxygenase activity
DA787_04515	COG1917	Cupin 2, conserved barrel domain protein
DA787_04515	COG4977	sequence-specific DNA binding
DA787_04520	COG2814	Major facilitator Superfamily
DA787_04525	COG1082	Xylose isomerase domain protein TIM barrel
DA787_04530	COG0673	inositol 2-dehydrogenase activity
DA787_04535	COG4585	Histidine kinase
DA787_04540	COG2197	response regulator
DA787_04545	COG1131	(ABC) transporter
DA787_04550	COG0842	Transport permease protein
DA787_04550	COG1511	domain protein
DA787_04555	COG0842	Transport permease protein
DA787_04560	COG1695	Transcriptional regulator
DA787_04565	COG1075	acetyltransferases and hydrolases with the alpha beta hydrolase fold
DA787_04570	COG3936	Protein involved in polysaccharide intercellular adhesin (PIA) synthesis biofilm formation
DA787_04575	COG1309	transcriptional regulator
DA787_04580	COG2814	Major facilitator Superfamily
DA787_04585	COG2318	DinB family
DA787_04590	COG2814	Major facilitator Superfamily
DA787_04595	COG1846	Transcriptional regulator
DA787_04600	COG2898	Catalyzes the transfer of a lysyl group from L-lysyl- tRNA(Lys) to membrane-bound phosphatidylglycerol (PG), which produces lysylphosphatidylglycerol (LPG), a major component of the bacterial membrane with a positive net charge. LPG synthesis contributes to bacterial virulence as it is involved in the resistance mechanism against cationic antimicrobial peptides (CAMP) produces by the host's immune system (defensins, cathelicidins) and by the competing microorganisms
DA787_04600	COG0392	lysyltransferase activity
DA787_04605	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
DA787_04610	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
DA787_04615	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
DA787_04620	COG0384	phenazine biosynthesis protein PhzF
DA787_04625	COG0778	Nitroreductase
DA787_04640	COG1090	epimerase
DA787_04645	COG2137	regulation of response to DNA damage stimulus
DA787_04655	COG2814	Major facilitator Superfamily
DA787_04670	COG3103	Sh3 type 3 domain protein
DA787_04675	COG5658	integral membrane protein
DA787_04680	COG0596	Alpha beta hydrolase
DA787_04685	COG0463	Glycosyl transferase, family 2
DA787_04690	COG4485	Bacterial membrane protein, YfhO
DA787_04695	COG1988	membrane-bound metal-dependent
DA787_04700	COG1194	a g-specific adenine glycosylase
DA787_04710	COG1028	Short-chain dehydrogenase reductase Sdr
DA787_04725	COG3557	Belongs to the UPF0374 family
DA787_04730	COG1132	(ABC) transporter
DA787_04735	COG4129	membrane
DA787_04740	COG0001	glutamate-1-semialdehyde 2,1-aminomutase activity
DA787_04745	COG1225	Alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen
DA787_04750	COG0735	belongs to the Fur family
DA787_04860	COG4326	sporulation control protein
DA787_04870	COG5577	PFAM Coat F domain
DA787_04875	COG3340	Belongs to the peptidase S51 family
DA787_04880	COG0422	Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction
DA787_04885	COG0277	FAD linked oxidase domain protein
DA787_04895	COG0753	catalase activity
DA787_04900	COG1116	anion transmembrane transporter activity
DA787_04905	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
DA787_04910	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
DA787_04915	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
DA787_04925	COG0199	Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
DA787_04935	COG1476	TRANSCRIPTIONal
DA787_04945	COG3382	B3 4 domain protein
DA787_04950	COG1600	Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr)
DA787_04960	COG0219	Methylates the ribose at the nucleotide 34 wobble position in the two leucyl isoacceptors tRNA(Leu)(CmAA) and tRNA(Leu)(cmnm5UmAA). Catalyzes the methyl transfer from S- adenosyl-L-methionine to the 2'-OH of the wobble nucleotide
DA787_04965	COG0789	Transcriptional regulator
DA787_04970	COG1664	Polymer-forming cytoskeletal
DA787_04975	COG1664	Polymer-forming cytoskeletal
DA787_04980	COG2766	serine protein kinase
DA787_04985	COG2718	Belongs to the UPF0229 family
DA787_04990	COG1846	Transcriptional regulator
DA787_04995	COG1566	PFAM secretion protein HlyD family protein
DA787_05000	COG2814	Major facilitator Superfamily
DA787_05005	COG0655	NAD(P)H dehydrogenase (quinone) activity
DA787_05025	COG1725	Transcriptional regulator
DA787_05030	COG1131	(ABC) transporter
DA787_05035	COG1131	(ABC) transporter
DA787_05040	COG1277	ABC-type transport system involved in multi-copper enzyme maturation permease component
DA787_05045	COG1278	Cold shock
DA787_05055	COG1464	Belongs to the NlpA lipoprotein family
DA787_05060	COG3706	GGDEF domain
DA787_05065	COG1823	symporter activity
DA787_05085	COG5577	PFAM Coat F domain
DA787_05090	COG0737	Belongs to the 5'-nucleotidase family
DA787_05090	COG1525	nuclease
DA787_05090	COG4085	toxin activity
DA787_05095	COG3764	Sortase (surface protein transpeptidase)
DA787_05100	COG0564	pseudouridine synthase activity
DA787_05110	COG0517	IMP dehydrogenase activity
DA787_05115	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
DA787_05120	COG3153	acetyltransferase
DA787_05120	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
DA787_05125	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
DA787_05130	COG1954	Regulates expression of the glpD operon. In the presence of glycerol 3-phosphate (G3P) causes antitermination of transcription of glpD at the inverted repeat of the leader region to enhance its transcription. Binds and stabilizes glpD leader mRNA
DA787_05135	COG0580	Belongs to the MIP aquaporin (TC 1.A.8) family
DA787_05140	COG0554	Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
DA787_05145	COG0578	Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family
DA787_05150	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
DA787_05155	COG4585	Histidine kinase
DA787_05155	COG2203	Gaf domain
DA787_05160	COG2197	response regulator
DA787_05165	COG0431	NADPH-dependent FMN reductase
DA787_05180	COG1388	LysM domain
DA787_05180	COG0791	NLP P60 protein
DA787_05185	COG1959	2 iron, 2 sulfur cluster binding
DA787_05190	COG0668	transmembrane transport
DA787_05195	COG2719	SpoVR family
DA787_05200	COG1785	Belongs to the alkaline phosphatase family
DA787_05205	COG1388	LysM domain
DA787_05205	COG0791	NLP P60 protein
DA787_05210	COG0583	DNA-binding transcription factor activity
DA787_05215	COG0372	Belongs to the citrate synthase family
DA787_05220	COG1028	Short-chain dehydrogenase reductase Sdr
DA787_05225	COG0531	amino acid
DA787_05230	COG0733	neurotransmitter:sodium symporter activity
DA787_05235	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
DA787_05240	COG0456	acetyltransferase
DA787_05255	COG1595	DNA-templated transcription, initiation
DA787_05260	COG0667	Aldo Keto reductase
DA787_05265	COG0204	Acyl-transferase
DA787_05270	COG1253	flavin adenine dinucleotide binding
DA787_05275	COG0789	Transcriptional regulator
DA787_05280	COG0436	Aminotransferase
DA787_05285	COG1253	flavin adenine dinucleotide binding
DA787_05290	COG0239	Important for reducing fluoride concentration in the cell, thus reducing its toxicity
DA787_05295	COG0239	Important for reducing fluoride concentration in the cell, thus reducing its toxicity
DA787_05300	COG0584	glycerophosphoryl diester phosphodiesterase
DA787_05310	COG0668	transmembrane transport
DA787_05315	COG0846	NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form
DA787_05320	COG0726	polysaccharide deacetylase
DA787_05325	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
DA787_05330	COG1757	Na H antiporter
DA787_05335	COG0589	response to stress
DA787_05345	COG1132	(ABC) transporter
DA787_05350	COG1132	(ABC) transporter
DA787_05355	COG0702	epimerase
DA787_05375	COG0189	ligase activity
DA787_05380	COG0189	ligase activity
DA787_05385	COG4399	Belongs to the UPF0754 family
DA787_05390	COG3679	Belongs to the UPF0342 family
DA787_05395	COG4335	DNA alkylation repair
DA787_05400	COG0561	phosphatase activity
DA787_05405	COG0635	Involved in the biosynthesis of porphyrin-containing compound
DA787_05410	COG0475	glutathione-regulated potassium exporter activity
DA787_05415	COG0490	domain, Protein
DA787_05425	COG1024	Enoyl-CoA hydratase
DA787_05435	COG4152	abc transporter atp-binding protein
DA787_05440	COG1668	transmembrane transport
DA787_05445	COG0420	3'-5' exonuclease activity
DA787_05450	COG4717	serine-type aminopeptidase activity
DA787_05455	COG3481	metal-dependent phosphohydrolase, HD sub domain
DA787_05465	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
DA787_05495	COG1846	Transcriptional regulator
DA787_05500	COG4980	gas vesicle protein
DA787_05515	COG1932	Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine
DA787_05520	COG0537	adenosine 5'-monophosphoramidase activity
DA787_05525	COG1131	(ABC) transporter
DA787_05530	COG4473	ABC transporter
DA787_05540	COG1473	amidohydrolase
DA787_05545	COG3069	C4-dicarboxylate transmembrane transporter activity
DA787_05555	COG2329	Antibiotic biosynthesis monooxygenase
DA787_05560	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
DA787_05565	COG0407	Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III
DA787_05580	COG1309	transcriptional regulator
DA787_05585	COG1511	domain protein
DA787_05590	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
DA787_05595	COG4377	Putative membrane peptidase family (DUF2324)
DA787_05605	COG1363	Peptidase, m42
DA787_05610	COG4405	Protein conserved in bacteria
DA787_05615	COG1301	dicarboxylic acid transport
DA787_05625	COG1234	tRNA 3'-trailer cleavage
DA787_05630	COG0095	Lipoate-protein ligase
DA787_05635	COG0702	epimerase
DA787_05640	COG0318	PFAM AMP-dependent synthetase and ligase
DA787_05650	COG0501	Belongs to the peptidase M48B family
DA787_05655	COG1404	Belongs to the peptidase S8 family
DA787_05660	COG0456	acetyltransferase
DA787_05665	COG0604	alcohol dehydrogenase
DA787_05670	COG4594	ABC-type Fe3 -citrate transport system, periplasmic component
DA787_05675	COG0406	alpha-ribazole phosphatase activity
DA787_05680	COG0183	Belongs to the thiolase family
DA787_05685	COG0318	PFAM AMP-dependent synthetase and ligase
DA787_05690	COG1268	BioY protein
DA787_05695	COG0840	transmembrane signaling receptor activity
DA787_05700	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
DA787_05700	COG0723	plastoquinol--plastocyanin reductase activity
DA787_05705	COG1028	Short-chain dehydrogenase reductase Sdr
DA787_05715	COG4903	ComK protein
DA787_05720	COG1028	Short-chain dehydrogenase reductase Sdr
DA787_05730	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
DA787_05745	COG0398	Pfam SNARE associated Golgi protein
DA787_05750	COG0681	Belongs to the peptidase S26 family
DA787_05755	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
DA787_05760	COG1846	Transcriptional regulator
DA787_05765	COG0738	Major facilitator superfamily
DA787_05770	COG0673	inositol 2-dehydrogenase activity
DA787_05775	COG0561	phosphatase activity
DA787_05780	COG0399	UDP-4-amino-4-deoxy-L-arabinose aminotransferase
DA787_05785	COG1609	Transcriptional regulator
DA787_05790	COG3180	Ammonia monooxygenase
DA787_05795	COG2814	Major facilitator Superfamily
DA787_05795	COG0477	Major facilitator Superfamily
DA787_05800	COG4533	DNA binding
DA787_05810	COG1633	Catalyzes the formation of the isocyclic ring in chlorophyll biosynthesis. Mediates the cyclase reaction, which results in the formation of divinylprotochlorophyllide (Pchlide) characteristic of all chlorophylls from magnesium-protoporphyrin IX 13-monomethyl ester (MgPMME)
DA787_05815	COG3857	The heterodimer acts as both an ATP-dependent DNA helicase and an ATP-dependent, dual-direction single-stranded exonuclease. Recognizes the chi site generating a DNA molecule suitable for the initiation of homologous recombination
DA787_05820	COG1074	ATP-dependent DNA helicase activity
DA787_05825	COG0420	3'-5' exonuclease activity
DA787_05830	COG0419	ATPase involved in DNA repair
DA787_05835	COG1403	HNH endonuclease
DA787_05875	COG5337	Spore coat protein CotH
DA787_05880	COG0179	Fumarylacetoacetate (FAA) hydrolase
DA787_05890	COG1404	Belongs to the peptidase S8 family
DA787_05900	COG0367	asparagine synthase
DA787_05905	COG2318	DinB family
DA787_05910	COG1562	ergosterol biosynthetic process
DA787_05915	COG0534	Mate efflux family protein
DA787_05920	COG2207	Transcriptional regulator
DA787_05920	COG1917	Cupin 2, conserved barrel domain protein
DA787_05925	COG1609	Transcriptional regulator
DA787_05930	COG0673	inositol 2-dehydrogenase activity
DA787_05935	COG2318	DinB family
DA787_05940	COG1279	arginine transmembrane transporter activity
DA787_05945	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
DA787_05950	COG1357	PFAM Pentapeptide repeats (8 copies)
DA787_05955	COG2267	carboxylic ester hydrolase activity
DA787_05960	COG0529	Catalyzes the synthesis of activated sulfate
DA787_05965	COG2046	Belongs to the sulfate adenylyltransferase family
DA787_05970	COG0175	sulfate reduction
DA787_05975	COG2045	Belongs to the ComB family
DA787_05980	COG1809	phosphosulfolactate synthase activity
DA787_05985	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
DA787_05990	COG4948	Mandelate Racemase Muconate Lactonizing
DA787_05995	COG2814	Major facilitator Superfamily
DA787_06000	COG0454	-acetyltransferase
DA787_06005	COG2153	protein acetylation
DA787_06010	COG0685	methylenetetrahydrofolate reductase (NAD(P)H) activity
DA787_06010	COG0646	methionine synthase
DA787_06015	COG1666	GTP binding
DA787_06020	COG2996	Protein conserved in bacteria
DA787_06040	COG1695	Transcriptional regulator
DA787_06055	COG3227	Zinc metalloprotease (Elastase)
DA787_06060	COG1307	EDD domain protein, DegV family
DA787_06065	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
DA787_06080	COG0561	phosphatase activity
DA787_06085	COG1073	alpha beta
DA787_06090	COG2151	metal-sulfur cluster biosynthetic enzyme
DA787_06100	COG0277	FAD linked oxidase domain protein
DA787_06105	COG2271	Major facilitator Superfamily
DA787_06110	COG0002	Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde
DA787_06125	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
DA787_06130	COG0505	Belongs to the CarA family
DA787_06135	COG0458	carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity
DA787_06140	COG0078	Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
DA787_06155	COG2267	carboxylic ester hydrolase activity
DA787_06165	COG1744	ABC transporter substrate-binding protein PnrA-like
DA787_06180	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
DA787_06185	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
DA787_06190	COG5504	Zn-dependent protease
DA787_06195	COG0444	Belongs to the ABC transporter superfamily
DA787_06200	COG4608	Belongs to the ABC transporter superfamily
DA787_06210	COG0601	transmembrane transport
DA787_06215	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
DA787_06225	COG0180	Tryptophanyl-tRNA synthetase
DA787_06230	COG4166	transmembrane transport
DA787_06235	COG0601	transmembrane transport
DA787_06240	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
DA787_06245	COG0444	Belongs to the ABC transporter superfamily
DA787_06250	COG4608	Belongs to the ABC transporter superfamily
DA787_06255	COG2814	Major facilitator Superfamily
DA787_06260	COG0456	acetyltransferase
DA787_06265	COG1393	Belongs to the ArsC family
DA787_06270	COG0861	Integral membrane protein TerC family
DA787_06280	COG4862	establishment of competence for transformation
DA787_06290	COG4469	Competence protein
DA787_06295	COG1164	Oligoendopeptidase f
DA787_06315	COG2346	COG2346, Truncated hemoglobins
DA787_06320	COG0741	lytic transglycosylase activity
DA787_06325	COG4116	CYTH
DA787_06335	COG2357	RelA SpoT domain protein
DA787_06340	COG0061	Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
DA787_06345	COG0564	pseudouridine synthase activity
DA787_06350	COG0639	Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP
DA787_06355	COG0569	domain protein
DA787_06355	COG0475	glutathione-regulated potassium exporter activity
DA787_06360	COG0819	Catalyzes an amino-pyrimidine hydrolysis reaction at the C5' of the pyrimidine moiety of thiamine compounds, a reaction that is part of a thiamine salvage pathway
DA787_06365	COG0352	thiamine-phosphate diphosphorylase activity
DA787_06370	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
DA787_06375	COG2104	thiamine diphosphate biosynthetic process
DA787_06380	COG2022	thiamine diphosphate biosynthetic process
DA787_06385	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
DA787_06390	COG0351	phosphomethylpyrimidine kinase
DA787_06395	COG0623	enoyl-[acyl-carrier-protein] reductase (NADH) activity
DA787_06450	COG0210	DNA helicase
DA787_06460	COG2153	protein acetylation
DA787_06465	COG1514	Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'- phosphomonoester
DA787_06470	COG2382	esterase
DA787_06475	COG0626	cystathionine gamma-synthase activity
DA787_06480	COG0626	cystathionine gamma-synthase activity
DA787_06485	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
DA787_06490	COG5505	Protein of unknown function (DUF819)
DA787_06520	COG3677	Transposase
DA787_06535	COG5484	DNA packaging
DA787_06540	COG1359	(4S)-4-hydroxy-5-phosphonooxypentane-2,3-dione isomerase activity
DA787_06545	COG1028	Short-chain dehydrogenase reductase Sdr
DA787_06555	COG3711	transcriptional antiterminator
DA787_06555	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
DA787_06560	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
DA787_06560	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
DA787_06560	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
DA787_06565	COG1482	cell wall glycoprotein biosynthetic process
DA787_06575	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
DA787_06585	COG2606	Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
DA787_06605	COG0109	protoheme IX farnesyltransferase activity
DA787_06615	COG0726	polysaccharide deacetylase
DA787_06630	COG5504	Zn-dependent protease
DA787_06635	COG2205	protein histidine kinase activity
DA787_06645	COG3383	formate dehydrogenase (NAD+) activity
DA787_06650	COG2427	Protein of unknown function (DUF1641)
DA787_06660	COG1051	belongs to the nudix hydrolase family
DA787_06670	COG2124	cytochrome p450
DA787_06675	COG1819	glycosyl
DA787_06685	COG1587	Uroporphyrinogen-III synthase
DA787_06690	COG0390	transport system, permease component
DA787_06695	COG1117	ATPase-coupled phosphate ion transmembrane transporter activity
DA787_06700	COG0697	spore germination
DA787_06705	COG4297	protein containing double-stranded beta helix domain
DA787_06715	COG1252	NADH dehydrogenase
DA787_06720	COG1904	glucuronate isomerase
DA787_06725	COG2211	Major facilitator Superfamily
DA787_06730	COG2055	Belongs to the LDH2 MDH2 oxidoreductase family
DA787_06735	COG1063	alcohol dehydrogenase
DA787_06740	COG1312	Catalyzes the dehydration of D-mannonate
DA787_06745	COG1028	Short-chain dehydrogenase reductase Sdr
DA787_06750	COG2271	Major facilitator Superfamily
DA787_06755	COG1609	Transcriptional regulator
DA787_06760	COG0246	Mannitol dehydrogenase
DA787_06765	COG2721	sulfolactate sulfo-lyase activity
DA787_06770	COG0730	response to heat
DA787_06775	COG2318	DinB family
DA787_06780	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
DA787_06785	COG0457	Tetratricopeptide repeat
DA787_06795	COG2350	Protein conserved in bacteria
DA787_06800	COG1388	LysM domain
DA787_06800	COG5632	N-Acetylmuramoyl-L-alanine amidase
DA787_06800	COG3409	Peptidoglycan-binding domain 1 protein
DA787_06810	COG4195	phage-related replication protein
DA787_06815	COG3546	catalase activity
DA787_06820	COG2856	Zn peptidase
DA787_06825	COG1396	sequence-specific DNA binding
DA787_06835	COG1522	sequence-specific DNA binding
DA787_06840	COG1484	DNA-dependent DNA replication
DA787_06860	COG1595	DNA-templated transcription, initiation
DA787_06865	COG5484	DNA packaging
DA787_06865	COG3728	DNA packaging
DA787_06870	COG1783	phage Terminase large subunit
DA787_06875	COG5518	Phage portal protein
DA787_06880	COG0338	D12 class N6 adenine-specific DNA methyltransferase
DA787_06885	COG4653	Phage capsid family
DA787_06935	COG3953	SLT domain
DA787_06935	COG5412	phage tail tape measure protein
DA787_06940	COG1652	LysM domain
DA787_06945	COG4193	domain, Protein
DA787_06955	COG3628	GPW Gp25 family protein
DA787_06960	COG3299	homolog of phage Mu protein gp47
DA787_06965	COG3778	Protein conserved in bacteria
DA787_07005	COG3409	Peptidoglycan-binding domain 1 protein
DA787_07005	COG5632	N-Acetylmuramoyl-L-alanine amidase
DA787_07025	COG0306	phosphate transporter
DA787_07030	COG1392	Phosphate transport regulator
DA787_07035	COG0531	amino acid
DA787_07040	COG0346	lactoylglutathione lyase activity
DA787_07050	COG1807	4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family
DA787_07055	COG0463	Glycosyl transferase, family 2
DA787_07060	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
DA787_07065	COG0345	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
DA787_07070	COG2362	D-Aminopeptidase
DA787_07075	COG0601	transmembrane transport
DA787_07080	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
DA787_07085	COG0444	Belongs to the ABC transporter superfamily
DA787_07090	COG4166	transmembrane transport
DA787_07095	COG1619	proteins homologs of microcin C7 resistance protein MccF
DA787_07100	COG4948	Mandelate Racemase Muconate Lactonizing
DA787_07105	COG0791	NLP P60 protein
DA787_07110	COG4608	Belongs to the ABC transporter superfamily
DA787_07115	COG2706	6-phosphogluconolactonase activity
DA787_07120	COG1834	amidinotransferase
DA787_07125	COG1607	acyl-coa hydrolase
DA787_07130	COG1017	nitric oxide dioxygenase activity
DA787_07130	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
DA787_07140	COG2323	membrane
DA787_07145	COG2318	DinB family
DA787_07150	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
DA787_07155	COG2076	Multidrug Resistance protein
DA787_07160	COG2076	Multidrug Resistance protein
DA787_07165	COG0788	formyltetrahydrofolate deformylase activity
DA787_07170	COG0263	Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate
DA787_07175	COG0014	Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5- carboxylate
DA787_07180	COG1764	response to oxidative stress
DA787_07185	COG1846	Transcriptional regulator
DA787_07190	COG1764	response to oxidative stress
DA787_07200	COG0590	tRNA wobble adenosine to inosine editing
DA787_07205	COG0620	Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation
DA787_07210	COG1404	Belongs to the peptidase S8 family
DA787_07215	COG1366	Belongs to the anti-sigma-factor antagonist family
DA787_07220	COG0619	Transmembrane (T) component of an energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
DA787_07225	COG1122	ATPase activity
DA787_07230	COG4721	ABC-type cobalt transport system, permease component
DA787_07240	COG0745	RESPONSE REGULATOR receiver
DA787_07245	COG3850	Histidine kinase
DA787_07245	COG5002	protein histidine kinase activity
DA787_07250	COG3212	peptidase
DA787_07255	COG3212	peptidase
DA787_07270	COG2239	Acts as a magnesium transporter
DA787_07275	COG0789	Transcriptional regulator
DA787_07290	COG1846	Transcriptional regulator
DA787_07295	COG0707	Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
DA787_07300	COG0726	polysaccharide deacetylase
DA787_07305	COG1408	metallophosphoesterase
DA787_07315	COG0463	Glycosyl transferase, family 2
DA787_07320	COG1793	dna ligase
DA787_07320	COG3285	dna ligase
DA787_07325	COG1273	With LigD forms a non-homologous end joining (NHEJ) DNA repair enzyme, which repairs dsDNA breaks with reduced fidelity. Binds linear dsDNA with 5'- and 3'- overhangs but not closed circular dsDNA nor ssDNA. Recruits and stimulates the ligase activity of LigD
DA787_07330	COG3300	MHYT domain
DA787_07330	COG5001	Diguanylate cyclase
DA787_07335	COG0586	Pfam SNARE associated Golgi protein
DA787_07340	COG0861	Integral membrane protein TerC family
DA787_07345	COG1191	sigma factor activity
DA787_07365	COG0501	Belongs to the peptidase M48B family
DA787_07370	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
DA787_07385	COG3594	Acyltransferase
DA787_07390	COG5002	protein histidine kinase activity
DA787_07395	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
DA787_07405	COG0182	Catalyzes the interconversion of methylthioribose-1- phosphate (MTR-1-P) into methylthioribulose-1-phosphate (MTRu-1- P)
DA787_07410	COG4857	Catalyzes the phosphorylation of methylthioribose into methylthioribose-1-phosphate
DA787_07415	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
DA787_07420	COG0436	Aminotransferase
DA787_07425	COG1850	ribulose-bisphosphate carboxylase activity
DA787_07430	COG4359	Dephosphorylates 2-hydroxy-3-keto-5-methylthiopentenyl- 1-phosphate (HK-MTPenyl-1-P) yielding 1,2-dihydroxy-3-keto-5- methylthiopentene (DHK-MTPene)
DA787_07435	COG0235	Class ii aldolase
DA787_07440	COG1791	Catalyzes 2 different reactions between oxygene and the acireductone 1,2-dihydroxy-3-keto-5-methylthiopentene (DHK-MTPene) depending upon the metal bound in the active site. Fe-containing acireductone dioxygenase (Fe-ARD) produces formate and 2-keto-4- methylthiobutyrate (KMTB), the alpha-ketoacid precursor of methionine in the methionine recycle pathway. Ni-containing acireductone dioxygenase (Ni-ARD) produces methylthiopropionate, carbon monoxide and formate, and does not lie on the methionine recycle pathway
DA787_07445	COG3339	Conserved Protein
DA787_07460	COG3852	Histidine kinase
DA787_07465	COG1846	Transcriptional regulator
DA787_07470	COG1360	Flagellar Motor Protein
DA787_07475	COG1291	archaeal or bacterial-type flagellum-dependent cell motility
DA787_07480	COG0542	response to heat
DA787_07485	COG3949	Membrane
DA787_07490	COG0603	Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0))
DA787_07495	COG0720	synthase
DA787_07500	COG0602	queuosine metabolic process
DA787_07505	COG0780	Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1)
DA787_07510	COG1733	regulation of RNA biosynthetic process
DA787_07515	COG1028	Short-chain dehydrogenase reductase Sdr
DA787_07520	COG1388	LysM domain
DA787_07520	COG4641	Protein conserved in bacteria
DA787_07525	COG1388	LysM domain
DA787_07540	COG4873	Protein conserved in bacteria
DA787_07550	COG3773	Cell wall hydrolase
DA787_07555	COG2244	polysaccharide biosynthetic process
DA787_07560	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
DA787_07565	COG2217	Heavy metal translocating P-type atpase
DA787_07575	COG0006	proline dipeptidase activity
DA787_07580	COG1609	Transcriptional regulator
DA787_07585	COG3711	transcriptional antiterminator
DA787_07590	COG2190	(PTS) system
DA787_07590	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
DA787_07590	COG1263	PTS System
DA787_07595	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
DA787_07600	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
DA787_07610	COG1533	DNA photolyase activity
DA787_07615	COG0456	acetyltransferase
DA787_07620	COG0840	transmembrane signaling receptor activity
DA787_07625	COG2084	Dehydrogenase
DA787_07630	COG2340	Cysteine-rich secretory protein family
DA787_07635	COG0768	penicillin binding
DA787_07640	COG4191	Histidine kinase
DA787_07645	COG0436	Aminotransferase
DA787_07655	COG0835	chemotaxis
DA787_07655	COG0784	Response regulator, receiver
DA787_07665	COG2814	Major facilitator Superfamily
DA787_07670	COG1376	ErfK ybiS ycfS ynhG family protein
DA787_07675	COG1408	metallophosphoesterase
DA787_07680	COG1028	Short-chain dehydrogenase reductase Sdr
DA787_07685	COG3409	Peptidoglycan-binding domain 1 protein
DA787_07690	COG3409	Peptidoglycan-binding domain 1 protein
DA787_07700	COG2200	EAL domain
DA787_07705	COG4703	Protein of unknown function (DUF1797)
DA787_07710	COG1978	Selenoprotein B, glycine betaine sarcosine D-proline reductase family
DA787_07720	COG0517	IMP dehydrogenase activity
DA787_07725	COG0583	DNA-binding transcription factor activity
DA787_07730	COG0716	FMN binding
DA787_07740	COG0716	FMN binding
DA787_07745	COG2171	N-acyltransferase activity
DA787_07750	COG1473	amidohydrolase
DA787_07760	COG0668	transmembrane transport
DA787_07765	COG0450	alkyl hydroperoxide reductase
DA787_07770	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
DA787_07785	COG0746	molybdenum cofactor guanylyltransferase activity
DA787_07790	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
DA787_07795	COG0303	'Molybdopterin
DA787_07800	COG1763	Mo-molybdopterin cofactor biosynthetic process
DA787_07805	COG0314	molybdopterin synthase activity
DA787_07810	COG1977	Involved in sulfur transfer in the conversion of molybdopterin precursor Z to molybdopterin
DA787_07815	COG1132	(ABC) transporter
DA787_07820	COG1132	(ABC) transporter
DA787_07830	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
DA787_07835	COG1136	(ABC) transporter
DA787_07840	COG0577	efflux transmembrane transporter activity
DA787_07845	COG1349	DNA-binding transcription factor activity
DA787_07850	COG1105	Belongs to the carbohydrate kinase PfkB family
DA787_07855	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
DA787_07855	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
DA787_07855	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
DA787_07860	COG0681	Belongs to the peptidase S26 family
DA787_07870	COG0488	(ABC) transporter
DA787_07875	COG1893	Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
DA787_07880	COG2309	aminopeptidase activity
DA787_07890	COG1077	Cell shape determining protein MreB Mrl
DA787_07895	COG2002	toxin-antitoxin pair type II binding
DA787_07900	COG3852	Histidine kinase
DA787_07905	COG2105	PFAM AIG2 family protein
DA787_07905	COG3703	Catalyzes the cleavage of glutathione into 5-oxo-L- proline and a Cys-Gly dipeptide. Acts specifically on glutathione, but not on other gamma-glutamyl peptides
DA787_07910	COG0569	domain protein
DA787_07915	COG1001	Belongs to the metallo-dependent hydrolases superfamily. Adenine deaminase family
DA787_07920	COG0595	An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
DA787_07930	COG0561	phosphatase activity
DA787_07935	COG0242	peptide deformylase activity
DA787_07945	COG0497	DNA recombination
DA787_07950	COG1071	oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor
DA787_07955	COG0022	dehydrogenase e1 component
DA787_07960	COG0508	dehydrogenase complex catalyzes the overall conversion of
DA787_07965	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
DA787_07980	COG1982	Orn Lys Arg decarboxylase major
DA787_07985	COG4476	Belongs to the UPF0223 family
DA787_07990	COG4493	Belongs to the UPF0637 family
DA787_08000	COG0483	inositol monophosphate 1-phosphatase activity
DA787_08010	COG3315	Exhibits S-adenosyl-L-methionine-dependent methyltransferase activity
DA787_08030	COG1595	DNA-templated transcription, initiation
DA787_08060	COG4896	Protein conserved in bacteria
DA787_08070	COG1875	ATPase related to phosphate starvation-inducible protein PhoH
DA787_08075	COG2041	Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. The catalytic subunit MsrP is non-stereospecific, being able to reduce both (R-) and (S-) diastereoisomers of methionine sulfoxide
DA787_08080	COG2066	Belongs to the glutaminase family
DA787_08085	COG4838	Belongs to the UPF0358 family
DA787_08090	COG0772	Belongs to the SEDS family
DA787_08095	COG1038	Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second
DA787_08100	COG1612	heme a metabolic process
DA787_08105	COG0109	protoheme IX farnesyltransferase activity
DA787_08110	COG1622	oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor
DA787_08110	COG2010	Cytochrome c
DA787_08115	COG0843	Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B
DA787_08120	COG1845	cytochrome c oxidase, subunit III
DA787_08125	COG3125	oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor
DA787_08130	COG3336	cytochrome c oxidase
DA787_08140	COG2905	signal-transduction protein containing cAMP-binding and CBS domains
DA787_08145	COG2340	Cysteine-rich secretory protein family
DA787_08160	COG3679	Belongs to the UPF0342 family
DA787_08165	COG4471	UPF0298 protein
DA787_08170	COG0742	ribosomal rna small subunit methyltransferase
DA787_08175	COG0669	Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate
DA787_08180	COG3314	Sporulation integral membrane protein YlbJ
DA787_08185	COG1752	Esterase of the alpha-beta hydrolase superfamily
DA787_08190	COG3480	Lon protease (S16) C-terminal proteolytic domain
DA787_08195	COG1323	Belongs to the UPF0348 family
DA787_08205	COG1399	metal-binding, possibly nucleic acid-binding protein
DA787_08210	COG0333	Belongs to the bacterial ribosomal protein bL32 family
DA787_08220	COG0454	-acetyltransferase
DA787_08225	COG1893	Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
DA787_08230	COG4365	Involved in bacillithiol (BSH) biosynthesis. May catalyze the last step of the pathway, the addition of cysteine to glucosamine malate (GlcN-Mal) to generate BSH
DA787_08235	COG2001	Belongs to the MraZ family
DA787_08240	COG0275	rRNA processing
DA787_08245	COG4839	cell division protein FtsL
DA787_08255	COG0768	penicillin binding
DA787_08260	COG0769	Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
DA787_08265	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
DA787_08270	COG0771	Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA)
DA787_08275	COG0772	Belongs to the SEDS family
DA787_08280	COG0707	Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
DA787_08285	COG0812	UDP-N-acetylmuramate dehydrogenase activity
DA787_08290	COG1589	Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic. May control correct divisome assembly
DA787_08295	COG3879	Bacterial protein of unknown function (DUF881)
DA787_08300	COG3879	Bacterial protein of unknown function (DUF881)
DA787_08305	COG3856	small basic protein
DA787_08310	COG0849	cell division
DA787_08315	COG0206	Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
DA787_08320	COG1404	Belongs to the peptidase S8 family
DA787_08320	COG4412	M6 family metalloprotease domain protein
DA787_08330	COG1191	sigma factor activity
DA787_08335	COG1191	sigma factor activity
DA787_08340	COG1119	ATPase activity
DA787_08345	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
DA787_08350	COG1873	PFAM PRC-barrel domain
DA787_08360	COG0325	Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis
DA787_08365	COG1799	cell septum assembly
DA787_08370	COG0762	integral membrane protein
DA787_08375	COG2302	S4 RNA-binding domain
DA787_08380	COG3599	regulation of cell shape
DA787_08385	COG0060	amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)
DA787_08390	COG1734	Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters
DA787_08395	COG0597	This protein specifically catalyzes the removal of signal peptides from prolipoproteins
DA787_08400	COG0564	pseudouridine synthase activity
DA787_08405	COG2065	Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant
DA787_08410	COG2233	PERMEase
DA787_08415	COG0540	Belongs to the ATCase OTCase family
DA787_08420	COG0044	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides
DA787_08425	COG0505	Belongs to the CarA family
DA787_08430	COG0458	carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity
DA787_08435	COG0543	2 iron, 2 sulfur cluster binding
DA787_08440	COG0167	dihydroorotate dehydrogenase activity
DA787_08445	COG0284	orotidine-5'-phosphate decarboxylase activity
DA787_08450	COG0461	Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)
DA787_08455	COG0175	sulfate reduction
DA787_08460	COG0306	phosphate transporter
DA787_08465	COG2046	Belongs to the sulfate adenylyltransferase family
DA787_08470	COG0529	Catalyzes the synthesis of activated sulfate
DA787_08475	COG0007	Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme
DA787_08480	COG2138	Cobalamin (vitamin B12) biosynthesis CbiX protein
DA787_08485	COG1648	precorrin-2 dehydrogenase activity
DA787_08495	COG0474	ATPase, P-type transporting, HAD superfamily, subfamily IC
DA787_08500	COG1561	YicC-like family, N-terminal region
DA787_08505	COG2052	Domain of unknown function (DUF370)
DA787_08510	COG0194	GDP metabolic process
DA787_08515	COG1758	RNA polymerase activity
DA787_08520	COG0452	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
DA787_08525	COG1198	Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
DA787_08530	COG0242	peptide deformylase activity
DA787_08535	COG0223	Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
DA787_08540	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
DA787_08540	COG0144	Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
DA787_08545	COG0820	rRNA (adenine-C2-)-methyltransferase activity
DA787_08550	COG0631	protein serine/threonine phosphatase activity
DA787_08555	COG0515	serine threonine protein kinase
DA787_08555	COG2815	serine threonine protein kinase
DA787_08560	COG1162	GTPase activity
DA787_08565	COG0036	Belongs to the ribulose-phosphate 3-epimerase family
DA787_08570	COG1564	THIamine pyrophosphokinase
DA787_08580	COG0227	Belongs to the bacterial ribosomal protein bL28 family
DA787_08585	COG1302	Protein conserved in bacteria
DA787_08590	COG1461	Dihydroxyacetone kinase
DA787_08595	COG1760	l-serine dehydratase
DA787_08600	COG1760	l-serine dehydratase
DA787_08605	COG1200	Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
DA787_08610	COG2050	protein possibly involved in aromatic compounds catabolism
DA787_08610	COG1349	DNA-binding transcription factor activity
DA787_08615	COG0416	fatty acid biosynthetic process
DA787_08620	COG0331	[acyl-carrier-protein] S-malonyltransferase activity
DA787_08625	COG1028	Short-chain dehydrogenase reductase Sdr
DA787_08630	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
DA787_08635	COG0571	ribonuclease III activity
DA787_08640	COG1196	nuclear chromosome segregation
DA787_08645	COG0552	protein localization to endoplasmic reticulum
DA787_08655	COG2739	Might take part in the signal recognition particle (SRP) pathway. This is inferred from the conservation of its genetic proximity to ftsY ffh. May be a regulatory protein
DA787_08660	COG0541	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
DA787_08665	COG0228	four-way junction DNA binding
DA787_08670	COG1837	Belongs to the UPF0109 family
DA787_08680	COG0806	An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes
DA787_08685	COG0336	Belongs to the RNA methyltransferase TrmD family
DA787_08690	COG0335	large ribosomal subunit rRNA binding
DA787_08695	COG1161	Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity
DA787_08700	COG0164	Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
DA787_08710	COG2257	FlhB HrpN YscU SpaS Family
DA787_08715	COG0045	succinate-CoA ligase (ADP-forming) activity
DA787_08720	COG0074	Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit
DA787_08725	COG0758	DNA mediated transformation
DA787_08730	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
DA787_08735	COG1206	Catalyzes the folate-dependent formation of 5-methyl- uridine at position 54 (M-5-U54) in all tRNAs
DA787_08740	COG4974	Belongs to the 'phage' integrase family
DA787_08745	COG5405	Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery
DA787_08750	COG1220	this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis
DA787_08755	COG4465	DNA-binding protein that represses the expression of many genes that are induced as cells make the transition from rapid exponential growth to stationary phase. It is a GTP-binding protein that senses the intracellular GTP concentration as an indicator of nutritional limitations. At low GTP concentration it no longer binds GTP and stop to act as a transcriptional repressor
DA787_08760	COG1815	bacterial-type flagellum-dependent cell motility
DA787_08765	COG1558	bacterial-type flagellum-dependent cell motility
DA787_08770	COG1677	Flagellar hook-basal body complex protein FliE
DA787_08775	COG1766	The M ring may be actively involved in energy transduction
DA787_08780	COG1536	FliG is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
DA787_08785	COG1317	bacterial-type flagellum organization
DA787_08790	COG1157	protein secretion by the type III secretion system
DA787_08795	COG2882	bacterial-type flagellum organization
DA787_08800	COG3334	PFAM MgtE intracellular
DA787_08805	COG3144	bacterial-type flagellum assembly
DA787_08810	COG1843	Required for flagellar hook formation. May act as a scaffolding protein
DA787_08815	COG4786	Flagellar basal body rod
DA787_08820	COG1582	Flagellar protein (FlbD)
DA787_08825	COG1580	Controls the rotational direction of flagella during chemotaxis
DA787_08830	COG1868	FliM is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
DA787_08835	COG1776	CheC inhibitor of MCP methylation
DA787_08835	COG1886	FliN is one of three proteins (FliG, FliN, FliM) that form the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
DA787_08840	COG2201	protein-glutamate methylesterase activity
DA787_08845	COG3190	flagellar
DA787_08850	COG1338	Plays a role in the flagellum-specific transport system
DA787_08855	COG1987	bacterial-type flagellum assembly
DA787_08860	COG1684	flagellar biosynthetic protein fliR
DA787_08865	COG1377	Required for formation of the rod structure in the basal body of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin
DA787_08870	COG1298	Required for formation of the rod structure of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin
DA787_08875	COG1419	protein localization to endoplasmic reticulum
DA787_08880	COG0455	bacterial-type flagellum organization
DA787_08885	COG2201	protein-glutamate methylesterase activity
DA787_08890	COG0643	Histidine kinase
DA787_08890	COG2198	Histidine kinase
DA787_08895	COG0835	chemotaxis
DA787_08900	COG1776	CheC inhibitor of MCP methylation
DA787_08905	COG1871	Probably deamidates glutamine residues to glutamate on methyl-accepting chemotaxis receptors (MCPs), playing an important role in chemotaxis
DA787_08910	COG1191	sigma factor activity
DA787_08920	COG0052	Belongs to the universal ribosomal protein uS2 family
DA787_08925	COG0264	Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome
DA787_08930	COG0528	UMP kinase activity
DA787_08935	COG0233	cytoplasmic translational termination
DA787_08940	COG0020	Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
DA787_08945	COG4589	Belongs to the CDS family
DA787_08950	COG0743	1-deoxy-D-xylulose-5-phosphate reductoisomerase activity
DA787_08955	COG0750	zinc metalloprotease
DA787_08960	COG0442	prolyl-tRNA aminoacylation
DA787_08965	COG2176	DNA-directed DNA polymerase activity
DA787_08970	COG0779	Required for maturation of 30S ribosomal subunits
DA787_08975	COG0195	Participates in both transcription termination and antitermination
DA787_08980	COG2740	Nucleic-acid-binding protein implicated in transcription termination
DA787_08985	COG1358	cellular component organization or biogenesis
DA787_08990	COG0532	One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex
DA787_08995	COG1550	Protein conserved in bacteria
DA787_09000	COG0858	One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA
DA787_09005	COG0130	Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs
DA787_09010	COG0196	riboflavin kinase activity
DA787_09015	COG0184	Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome
DA787_09020	COG1185	polyribonucleotide nucleotidyltransferase activity
DA787_09025	COG0726	polysaccharide deacetylase
DA787_09030	COG0612	Peptidase, M16
DA787_09035	COG1873	PFAM PRC-barrel domain
DA787_09040	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
DA787_09045	COG0452	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
DA787_09050	COG0136	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
DA787_09055	COG0527	aspartate kinase activity
DA787_09060	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
DA787_09065	COG0595	An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
DA787_09070	COG0740	serine-type endopeptidase activity
DA787_09080	COG1674	ftsk spoiiie
DA787_09080	COG4980	gas vesicle protein
DA787_09085	COG2188	Transcriptional regulator
DA787_09090	COG2814	Major facilitator Superfamily
DA787_09095	COG0612	Peptidase, M16
DA787_09100	COG0612	Peptidase, M16
DA787_09105	COG0300	oxidoreductase activity
DA787_09120	COG1426	Protein conserved in bacteria
DA787_09125	COG0558	Belongs to the CDP-alcohol phosphatidyltransferase class-I family
DA787_09140	COG0136	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
DA787_09145	COG0527	aspartate kinase activity
DA787_09150	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
DA787_09155	COG0595	An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
DA787_09160	COG0740	serine-type endopeptidase activity
DA787_09170	COG4980	gas vesicle protein
DA787_09170	COG1674	ftsk spoiiie
DA787_09175	COG2188	Transcriptional regulator
DA787_09180	COG2814	Major facilitator Superfamily
DA787_09185	COG0612	Peptidase, M16
DA787_09190	COG0612	Peptidase, M16
DA787_09195	COG0300	oxidoreductase activity
DA787_09210	COG1426	Protein conserved in bacteria
DA787_09215	COG0558	Belongs to the CDP-alcohol phosphatidyltransferase class-I family
DA787_09220	COG1058	Belongs to the CinA family
DA787_09220	COG1546	Belongs to the CinA family
DA787_09225	COG0468	Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage
DA787_09230	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
DA787_09235	COG1418	mRNA catabolic process
DA787_09240	COG1692	metallophosphoesterase
DA787_09245	COG2359	stage V sporulation protein S
DA787_09250	COG1063	alcohol dehydrogenase
DA787_09255	COG0156	8-amino-7-oxononanoate synthase activity
DA787_09260	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
DA787_09265	COG4550	Control of competence regulator ComK, YlbF/YmcA
DA787_09275	COG0249	that it carries out the mismatch recognition step. This protein has a weak ATPase activity
DA787_09280	COG0323	This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex
DA787_09295	COG3226	Transcriptional regulator
DA787_09300	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
DA787_09310	COG0331	[acyl-carrier-protein] S-malonyltransferase activity
DA787_09315	COG3321	synthase
DA787_09320	COG0331	[acyl-carrier-protein] S-malonyltransferase activity
DA787_09320	COG2070	2-Nitropropane dioxygenase
DA787_09325	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
DA787_09330	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
DA787_09335	COG3425	synthase
DA787_09340	COG1024	Enoyl-CoA hydratase
DA787_09345	COG1024	Enoyl-CoA hydratase
DA787_09350	COG3321	synthase
DA787_09350	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
DA787_09350	COG0300	oxidoreductase activity
DA787_09350	COG1028	Short-chain dehydrogenase reductase Sdr
DA787_09350	COG0318	PFAM AMP-dependent synthetase and ligase
DA787_09355	COG3321	synthase
DA787_09355	COG0300	oxidoreductase activity
DA787_09355	COG4221	oxidoreductase activity
DA787_09355	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
DA787_09360	COG3321	synthase
DA787_09360	COG1028	Short-chain dehydrogenase reductase Sdr
DA787_09360	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
DA787_09360	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
DA787_09360	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
DA787_09370	COG3321	synthase
DA787_09370	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
DA787_09370	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
DA787_09370	COG3319	amino acid activation for nonribosomal peptide biosynthetic process
DA787_09375	COG2124	cytochrome p450
DA787_09385	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
DA787_09390	COG1404	Belongs to the peptidase S8 family
DA787_09395	COG4195	phage-related replication protein
DA787_09400	COG1764	response to oxidative stress
DA787_09405	COG2076	Multidrug Resistance protein
DA787_09410	COG2076	Multidrug Resistance protein
DA787_09425	COG0324	Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A)
DA787_09430	COG1923	regulation of RNA biosynthetic process
DA787_09445	COG1780	Probably involved in ribonucleotide reductase function
DA787_09450	COG0209	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
DA787_09455	COG0208	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
DA787_09460	COG4112	unkown
DA787_09465	COG0860	N-Acetylmuramoyl-L-alanine amidase
DA787_09475	COG0464	growth
DA787_09480	COG2262	GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
DA787_09485	COG4100	CystaTHIonine beta-lyase family protein involved in aluminum resistance
DA787_09490	COG0789	Transcriptional regulator
DA787_09495	COG0174	glutamine synthetase
DA787_09515	COG4282	regulation of fungal-type cell wall biogenesis
DA787_09525	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
DA787_09555	COG0135	phosphoribosylanthranilate isomerase activity
DA787_09560	COG2211	Major facilitator Superfamily
DA787_09565	COG3507	Belongs to the glycosyl hydrolase 43 family
DA787_09570	COG1940	carbohydrate kinase activity
DA787_09575	COG2115	Belongs to the xylose isomerase family
DA787_09580	COG1070	Carbohydrate kinase
DA787_09590	COG1525	nuclease
DA787_09595	COG2814	Major facilitator Superfamily
DA787_09600	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
DA787_09610	COG0756	dUTP diphosphatase activity
DA787_09625	COG0207	Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis
DA787_09650	COG1826	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
DA787_09665	COG3832	glyoxalase III activity
DA787_09680	COG0697	spore germination
DA787_09685	COG0531	amino acid
DA787_09715	COG4195	phage-related replication protein
DA787_09725	COG0346	lactoylglutathione lyase activity
DA787_09735	COG1974	Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
DA787_09740	COG1388	LysM domain
DA787_09745	COG1961	COG1961 Site-specific recombinases, DNA invertase Pin homologs
DA787_09750	COG4224	UPF0291 protein
DA787_09755	COG0021	Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate
DA787_09765	COG3763	UPF0154 protein
DA787_09775	COG0785	Cytochrome C biogenesis protein
DA787_09780	COG2201	protein-glutamate methylesterase activity
DA787_09785	COG4846	Membrane protein involved in cytochrome C biogenesis
DA787_09795	COG0071	Belongs to the small heat shock protein (HSP20) family
DA787_09810	COG1048	Catalyzes the isomerization of citrate to isocitrate via cis-aconitate
DA787_09815	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
DA787_09835	COG0824	Thioesterase
DA787_09845	COG4841	protein insertion into membrane
DA787_09850	COG0344	acyl-phosphate glycerol-3-phosphate acyltransferase activity
DA787_09855	COG1832	CoA-binding protein
DA787_09860	COG0187	DNA topoisomerase II activity
DA787_09865	COG0188	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
DA787_09875	COG1115	amino acid carrier protein
DA787_09880	COG2730	Belongs to the glycosyl hydrolase 5 (cellulase A) family
DA787_09890	COG5520	Belongs to the glycosyl hydrolase 30 family
DA787_09895	COG3507	Belongs to the glycosyl hydrolase 43 family
DA787_09900	COG2246	polysaccharide biosynthetic process
DA787_09905	COG1210	Utp--glucose-1-phosphate uridylyltransferase
DA787_09910	COG0586	Pfam SNARE associated Golgi protein
DA787_09915	COG2404	hydrolase activity, acting on ester bonds
DA787_09920	COG4799	Acetyl-CoA carboxylase, carboxyltransferase component subunits alpha and beta
DA787_09925	COG1024	Enoyl-CoA hydratase
DA787_09930	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
DA787_09935	COG0511	ligase activity, forming carbon-carbon bonds
DA787_09940	COG0439	Biotin carboxylase
DA787_09945	COG0318	PFAM AMP-dependent synthetase and ligase
DA787_09950	COG1960	acyl-CoA dehydrogenase activity
DA787_09965	COG1649	PFAM Uncharacterised BCR, COG1649
DA787_09975	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
DA787_09975	COG3319	amino acid activation for nonribosomal peptide biosynthetic process
DA787_09980	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
DA787_09985	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
DA787_09990	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
DA787_10000	COG2027	D-alanyl-D-alanine carboxypeptidase
DA787_10005	COG2017	converts alpha-aldose to the beta-anomer
DA787_10010	COG0534	Mate efflux family protein
DA787_10025	COG0582	viral genome integration into host DNA
DA787_10030	COG0166	Belongs to the GPI family
DA787_10035	COG0405	Gamma-glutamyltransferase
DA787_10040	COG0583	DNA-binding transcription factor activity
DA787_10045	COG0604	alcohol dehydrogenase
DA787_10050	COG0493	'glutamate synthase
DA787_10055	COG0067	glutamate synthase
DA787_10055	COG0070	glutamate synthase
DA787_10055	COG0069	glutamate synthase activity
DA787_10060	COG0583	DNA-binding transcription factor activity
DA787_10065	COG0263	Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate
DA787_10070	COG0345	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
DA787_10080	COG0300	oxidoreductase activity
DA787_10085	COG4768	protein containing a divergent version of the methyl-accepting chemotaxis-like domain
DA787_10095	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
DA787_10100	COG2814	Major facilitator Superfamily
DA787_10105	COG1070	Carbohydrate kinase
DA787_10110	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
DA787_10115	COG0243	molybdopterin cofactor binding
DA787_10145	COG5278	phosphoserine phosphatase activity
DA787_10145	COG0840	transmembrane signaling receptor activity
DA787_10150	COG2368	4-hydroxyphenylacetate
DA787_10155	COG4305	rare lipoprotein A
DA787_10160	COG3619	membrane
DA787_10165	COG3866	Pectate lyase
DA787_10170	COG2135	peptidase activity
DA787_10180	COG2140	Oxalate decarboxylase
DA787_10195	COG0456	acetyltransferase
DA787_10215	COG0697	spore germination
DA787_10225	COG0693	protein deglycase activity
DA787_10230	COG2367	Beta-lactamase
DA787_10255	COG3848	Pyruvate phosphate dikinase
DA787_10255	COG0574	Belongs to the PEP-utilizing enzyme family
DA787_10260	COG0726	polysaccharide deacetylase
DA787_10270	COG2314	TM2 domain
DA787_10275	COG1396	sequence-specific DNA binding
DA787_10290	COG2135	peptidase activity
DA787_10325	COG0457	Tetratricopeptide repeat
DA787_10350	COG5290	Psort location Cytoplasmic, score
DA787_10375	COG5444	nuclease activity
DA787_10380	COG4282	regulation of fungal-type cell wall biogenesis
DA787_10385	COG1231	oxidoreductase activity
DA787_10390	COG5434	Belongs to the glycosyl hydrolase 28 family
DA787_10395	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
DA787_10400	COG0662	Cupin 2, conserved barrel domain protein
DA787_10400	COG2207	Transcriptional regulator
DA787_10405	COG0456	acetyltransferase
DA787_10410	COG1309	transcriptional regulator
DA787_10415	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
DA787_10420	COG3708	Transcriptional regulator
DA787_10425	COG2378	regulation of single-species biofilm formation
DA787_10435	COG0640	Transcriptional regulator
DA787_10440	COG0741	lytic transglycosylase activity
DA787_10445	COG2322	membrane
DA787_10460	COG1619	proteins homologs of microcin C7 resistance protein MccF
DA787_10465	COG3239	Fatty acid desaturase
DA787_10470	COG4585	Histidine kinase
DA787_10475	COG2197	response regulator
DA787_10480	COG3584	3D domain protein
DA787_10480	COG1388	LysM domain
DA787_10485	COG0514	ATP-dependent DNA helicase (RecQ)
DA787_10500	COG1182	Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity
DA787_10505	COG1734	Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters
DA787_10520	COG0071	Belongs to the small heat shock protein (HSP20) family
DA787_10545	COG1012	belongs to the aldehyde dehydrogenase family
DA787_10550	COG1657	PFAM Prenyltransferase squalene oxidase
DA787_10555	COG0605	Destroys radicals which are normally produced within the cells and which are toxic to biological systems
DA787_10560	COG0733	neurotransmitter:sodium symporter activity
DA787_10565	COG0385	Bile acid
DA787_10570	COG0508	dehydrogenase complex catalyzes the overall conversion of
DA787_10575	COG0567	Dehydrogenase, E1 component
DA787_10580	COG4548	von Willebrand factor, type A
DA787_10585	COG0714	Associated with various cellular activities
DA787_10590	COG2032	superoxide dismutase activity
DA787_10595	COG0791	NLP P60 protein
DA787_10595	COG1388	LysM domain
DA787_10600	COG1819	glycosyl
DA787_10605	COG1624	Catalyzes the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria
DA787_10610	COG0534	Mate efflux family protein
DA787_10615	COG1366	Belongs to the anti-sigma-factor antagonist family
DA787_10620	COG2120	A mycothiol (MSH, N-acetylcysteinyl-glucosaminyl- inositol) S-conjugate amidase, it recycles conjugated MSH to the N-acetyl cysteine conjugate (AcCys S-conjugate, a mercapturic acid) and the MSH precursor. Involved in MSH-dependent detoxification of a number of alkylating agents and antibiotics
DA787_10625	COG2120	A mycothiol (MSH, N-acetylcysteinyl-glucosaminyl- inositol) S-conjugate amidase, it recycles conjugated MSH to the N-acetyl cysteine conjugate (AcCys S-conjugate, a mercapturic acid) and the MSH precursor. Involved in MSH-dependent detoxification of a number of alkylating agents and antibiotics
DA787_10635	COG2962	Rard protein
DA787_10650	COG2610	gluconate transmembrane transporter activity
DA787_10655	COG1942	4-Oxalocrotonate Tautomerase
DA787_10660	COG1733	regulation of RNA biosynthetic process
DA787_10665	COG0778	Nitroreductase
DA787_10670	COG0400	carboxylic ester hydrolase activity
DA787_10675	COG0346	lactoylglutathione lyase activity
DA787_10685	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
DA787_10690	COG3409	Peptidoglycan-binding domain 1 protein
DA787_10690	COG0793	Belongs to the peptidase S41A family
DA787_10695	COG2226	methyltransferase
DA787_10705	COG1876	peptidase activity
DA787_10710	COG0813	purine-nucleoside phosphorylase activity
DA787_10725	COG0671	phosphoesterase, PA-phosphatase related
DA787_10750	COG4479	Belongs to the UPF0346 family
DA787_10760	COG1509	lysine 2,3-aminomutase activity
DA787_10765	COG0456	acetyltransferase
DA787_10770	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
DA787_10775	COG2057	Acyl CoA acetate 3-ketoacid CoA transferase beta subunit
DA787_10780	COG1788	Acyl CoA acetate 3-ketoacid CoA transferase, alpha subunit
DA787_10785	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
DA787_10800	COG0456	acetyltransferase
DA787_10805	COG0463	Glycosyl transferase, family 2
DA787_10820	COG4641	Protein conserved in bacteria
DA787_10825	COG4247	3-phytase (myo-inositol-hexaphosphate 3-phosphohydrolase)
DA787_10830	COG1086	Polysaccharide biosynthesis protein
DA787_10835	COG0229	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
DA787_10840	COG0225	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
DA787_10845	COG1846	Transcriptional regulator
DA787_10850	COG0534	Mate efflux family protein
DA787_10860	COG4698	Protein conserved in bacteria
DA787_10865	COG2755	lipolytic protein G-D-S-L family
DA787_10870	COG1999	signal sequence binding
DA787_10880	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
DA787_10885	COG1221	Transcriptional regulators containing an AAA-type ATPase domain and a DNA-binding domain
DA787_10890	COG1272	protein, Hemolysin III
DA787_10895	COG0204	Acyl-transferase
DA787_10900	COG0262	Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis
DA787_10905	COG0207	Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis
DA787_10910	COG1267	Lipid phosphatase which dephosphorylates phosphatidylglycerophosphate (PGP) to phosphatidylglycerol (PG)
DA787_10920	COG2136	Putative SAM-dependent methyltransferase
DA787_10920	COG2521	methyltransferase
DA787_10930	COG0129	dihydroxy-acid dehydratase activity
DA787_10935	COG1413	lyase activity
DA787_10940	COG1418	mRNA catabolic process
DA787_10945	COG0386	Belongs to the glutathione peroxidase family
DA787_10950	COG1897	L-methionine biosynthetic process from homoserine via O-succinyl-L-homoserine and cystathionine
DA787_10955	COG0707	Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
DA787_10965	COG1278	Cold shock
DA787_10985	COG0328	RNA-DNA hybrid ribonuclease activity
DA787_10990	COG1738	Involved in the import of queuosine (Q) precursors, required for Q precursor salvage
DA787_10995	COG0328	RNA-DNA hybrid ribonuclease activity
DA787_11005	COG0258	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
DA787_11020	COG0699	ATPase. Has a role at an early stage in the morphogenesis of the spore coat
DA787_11030	COG1755	Isoprenylcysteine carboxyl methyltransferase
DA787_11035	COG3424	synthase
DA787_11040	COG2233	PERMEase
DA787_11045	COG0503	Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
DA787_11050	COG2317	Broad specificity carboxypetidase that releases amino acids sequentially from the C-terminus, including neutral, aromatic, polar and basic residues
DA787_11060	COG0800	Aldolase
DA787_11065	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
DA787_11070	COG1609	Transcriptional regulator
DA787_11075	COG3717	Catalyzes the isomerization of 5-dehydro-4-deoxy-D- glucuronate to 3-deoxy-D-glycero-2,5-hexodiulosonate
DA787_11080	COG1028	Short-chain dehydrogenase reductase Sdr
DA787_11085	COG1199	ATP-dependent helicase activity
DA787_11100	COG0116	Belongs to the methyltransferase superfamily
DA787_11115	COG4474	Belongs to the UPF0398 family
DA787_11130	COG3359	exonuclease
DA787_11135	COG1111	helicase
DA787_11135	COG1205	dead DEAH box helicase
DA787_11140	COG2190	(PTS) system
DA787_11145	COG0071	Belongs to the small heat shock protein (HSP20) family
DA787_11180	COG3331	DNA recombination
DA787_11185	COG4499	WXG100 protein secretion system (Wss), protein YukC
DA787_11185	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
DA787_11195	COG0177	DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
DA787_11200	COG3935	DnaD domain protein
DA787_11205	COG0017	Asparaginyl-tRNA synthetase
DA787_11210	COG0436	Aminotransferase
DA787_11215	COG5353	protein conserved in bacteria
DA787_11225	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
DA787_11225	COG1199	ATP-dependent helicase activity
DA787_11230	COG0853	Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine
DA787_11235	COG0414	Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate
DA787_11240	COG0413	3-methyl-2-oxobutanoate hydroxymethyltransferase activity
DA787_11245	COG0340	biotin-[acetyl-CoA-carboxylase] ligase activity
DA787_11245	COG1654	Acts both as a biotin-- acetyl-CoA-carboxylase ligase and a biotin-operon repressor. In the presence of ATP, BirA activates biotin to form the BirA-biotinyl-5'-adenylate (BirA-bio- 5'-AMP or holoBirA) complex. HoloBirA can either transfer the biotinyl moiety to the biotin carboxyl carrier protein (BCCP) subunit of acetyl-CoA carboxylase, or bind to the biotin operator site and inhibit transcription of the operon
DA787_11250	COG0617	tRNA 3'-terminal CCA addition
DA787_11255	COG0438	transferase activity, transferring glycosyl groups
DA787_11260	COG2120	A mycothiol (MSH, N-acetylcysteinyl-glucosaminyl- inositol) S-conjugate amidase, it recycles conjugated MSH to the N-acetyl cysteine conjugate (AcCys S-conjugate, a mercapturic acid) and the MSH precursor. Involved in MSH-dependent detoxification of a number of alkylating agents and antibiotics
DA787_11265	COG1803	Methylglyoxal synthase
DA787_11270	COG0289	4-hydroxy-tetrahydrodipicolinate reductase
DA787_11275	COG1694	Mazg nucleotide pyrophosphohydrolase
DA787_11280	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
DA787_11290	COG4347	Protein of unknown function (DUF1405)
DA787_11295	COG2010	Cytochrome c
DA787_11295	COG1290	Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis
DA787_11300	COG1290	Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis
DA787_11305	COG0723	plastoquinol--plastocyanin reductase activity
DA787_11315	COG5582	Belongs to the UPF0302 family
DA787_11320	COG0457	Tetratricopeptide repeat
DA787_11325	COG0128	3-phosphoshikimate 1-carboxyvinyltransferase activity
DA787_11330	COG0287	Prephenate dehydrogenase
DA787_11335	COG0079	Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
DA787_11340	COG0159	tryptophan synthase activity
DA787_11345	COG0133	tryptophan synthase activity
DA787_11350	COG0135	phosphoribosylanthranilate isomerase activity
DA787_11360	COG0547	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
DA787_11365	COG0147	Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
DA787_11370	COG4401	Chorismate mutase type I
DA787_11375	COG0337	Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ)
DA787_11380	COG0082	Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system
DA787_11385	COG1352	Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP
DA787_11390	COG0105	UTP biosynthetic process
DA787_11395	COG0142	geranyltranstransferase activity
DA787_11400	COG2226	methyltransferase
DA787_11405	COG0142	geranyltranstransferase activity
DA787_11415	COG0302	gtp cyclohydrolase
DA787_11420	COG0776	regulation of translation
DA787_11425	COG0699	ATPase. Has a role at an early stage in the morphogenesis of the spore coat
DA787_11440	COG0240	glycerol-3-phosphate dehydrogenase [NAD(P)+] activity
DA787_11445	COG1160	GTP binding
DA787_11470	COG1304	FMN binding
DA787_11475	COG0539	negative regulation of cytoplasmic translation
DA787_11480	COG0283	belongs to the cytidylate kinase family. Type 1 subfamily
DA787_11490	COG5581	Acts as a flagellar brake, regulating swimming and swarming in a bis-(3'-5') cyclic diguanylic acid (c-di-GMP)- dependent manner. Binds 1 c-di-GMP dimer per subunit. Increasing levels of c-di-GMP lead to decreased motility
DA787_11495	COG2959	enzyme of heme biosynthesis
DA787_11500	COG3773	Cell wall hydrolase
DA787_11500	COG3409	Peptidoglycan-binding domain 1 protein
DA787_11505	COG2339	peptidase activity
DA787_11510	COG0492	ferredoxin-NADP+ reductase activity
DA787_11515	COG0334	Belongs to the Glu Leu Phe Val dehydrogenases family
DA787_11520	COG4862	establishment of competence for transformation
DA787_11525	COG1408	metallophosphoesterase
DA787_11535	COG1388	LysM domain
DA787_11540	COG1266	CAAX protease self-immunity
DA787_11545	COG0514	ATP-dependent DNA helicase (RecQ)
DA787_11550	COG4955	Helix-turn-helix domain
DA787_11555	COG1141	Ferredoxin
DA787_11560	COG3601	Mediates riboflavin uptake, may also transport FMN and roseoflavin. Probably a riboflavin-binding protein that interacts with the energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates. The substrates themselves are bound by transmembrane, not extracytoplasmic soluble proteins
DA787_11565	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
DA787_11570	COG0710	3-dehydroquinate dehydratase activity
DA787_11580	COG1595	DNA-templated transcription, initiation
DA787_11585	COG5002	protein histidine kinase activity
DA787_11590	COG0745	RESPONSE REGULATOR receiver
DA787_11595	COG0755	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
DA787_11600	COG1333	cytochrome c biogenesis protein
DA787_11605	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
DA787_11610	COG1187	pseudouridine synthase activity
DA787_11615	COG0700	Nucleoside recognition
DA787_11620	COG2715	membrane protein required for spore maturation
DA787_11625	COG1686	Belongs to the peptidase S11 family
DA787_11635	COG1386	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves
DA787_11640	COG1354	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves
DA787_11645	COG1547	Domain of unknown function (DUF309)
DA787_11650	COG0456	acetyltransferase
DA787_11655	COG0054	6,7-dimethyl-8-ribityllumazine synthase activity
DA787_11660	COG0807	Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
DA787_11660	COG0108	Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
DA787_11665	COG0307	riboflavin synthase, alpha
DA787_11670	COG1985	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
DA787_11670	COG0117	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
DA787_11680	COG0681	Belongs to the peptidase S26 family
DA787_11690	COG3478	Nucleic-acid-binding protein containing Zn-ribbon domain (DUF2082)
DA787_11715	COG0652	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
DA787_11725	COG4086	secreted protein
DA787_11730	COG0019	diaminopimelate decarboxylase activity
DA787_11735	COG0697	spore germination
DA787_11750	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
DA787_11770	COG1191	sigma factor activity
DA787_11775	COG2172	sigma factor antagonist activity
DA787_11780	COG1366	Belongs to the anti-sigma-factor antagonist family
DA787_11785	COG1686	Belongs to the peptidase S11 family
DA787_11790	COG0005	The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate
DA787_11795	COG1015	Phosphotransfer between the C1 and C5 carbon atoms of pentose
DA787_11800	COG4974	Belongs to the 'phage' integrase family
DA787_11810	COG0735	belongs to the Fur family
DA787_11815	COG1300	Membrane
DA787_11825	COG0281	malic enzyme
DA787_11830	COG1757	Na H antiporter
DA787_11835	COG1027	Aspartate ammonia-lyase
DA787_11840	COG0252	asparaginase activity
DA787_11845	COG1396	sequence-specific DNA binding
DA787_11850	COG1379	DNA repair
DA787_11855	COG0494	nUDIX hydrolase
DA787_11865	COG0667	Aldo Keto reductase
DA787_11875	COG1073	alpha beta
DA787_11885	COG4918	Iron-sulphur cluster biosynthesis
DA787_11890	COG0456	acetyltransferase
DA787_11890	COG2320	Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A
DA787_11895	COG2329	Antibiotic biosynthesis monooxygenase
DA787_11900	COG0456	acetyltransferase
DA787_11910	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
DA787_11920	COG2211	Major facilitator Superfamily
DA787_11925	COG0346	lactoylglutathione lyase activity
DA787_11930	COG1072	(Pantothenic acid kinase))
DA787_11935	COG3048	D-serine ammonia-lyase activity
DA787_11940	COG0300	oxidoreductase activity
DA787_11945	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
DA787_11950	COG0345	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
DA787_11955	COG4187	Peptidase family M20/M25/M40
DA787_11960	COG1902	pentaerythritol trinitrate reductase activity
DA787_11965	COG0596	Alpha beta hydrolase
DA787_11975	COG1234	tRNA 3'-trailer cleavage
DA787_11980	COG0364	Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
DA787_11985	COG0362	Catalyzes the oxidative decarboxylation of 6- phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH
DA787_11990	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
DA787_12000	COG0706	membrane insertase activity
DA787_12005	COG3361	conserved protein (COG2071)
DA787_12010	COG2195	Cleaves the N-terminal amino acid of tripeptides
DA787_12015	COG4799	Acetyl-CoA carboxylase, carboxyltransferase component subunits alpha and beta
DA787_12020	COG0346	lactoylglutathione lyase activity
DA787_12025	COG1376	ErfK ybiS ycfS ynhG family protein
DA787_12030	COG4129	membrane
DA787_12035	COG1126	abc transporter atp-binding protein
DA787_12040	COG0765	amino acid transport
DA787_12045	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
DA787_12055	COG1597	lipid kinase activity
DA787_12060	COG2814	Major facilitator Superfamily
DA787_12065	COG4978	Transcriptional regulator
DA787_12065	COG0789	Transcriptional regulator
DA787_12070	COG0508	dehydrogenase complex catalyzes the overall conversion of
DA787_12075	COG0022	dehydrogenase e1 component
DA787_12080	COG1071	oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor
DA787_12085	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
DA787_12090	COG3426	butyrate kinase activity
DA787_12095	COG0334	Belongs to the Glu Leu Phe Val dehydrogenases family
DA787_12100	COG0280	phosphate acetyltransferase
DA787_12105	COG3829	transcription factor binding
DA787_12105	COG3290	protein histidine kinase activity
DA787_12115	COG2513	Catalyzes the thermodynamically favored C-C bond cleavage of (2R,3S)-2-methylisocitrate to yield pyruvate and succinate
DA787_12120	COG2079	MmgE PrpD family protein
DA787_12125	COG0372	Belongs to the citrate synthase family
DA787_12130	COG1960	acyl-CoA dehydrogenase activity
DA787_12135	COG1250	3-hydroxyacyl-CoA dehydrogenase
DA787_12140	COG0183	Belongs to the thiolase family
DA787_12145	COG0584	glycerophosphoryl diester phosphodiesterase
DA787_12150	COG0860	N-Acetylmuramoyl-L-alanine amidase
DA787_12165	COG1902	pentaerythritol trinitrate reductase activity
DA787_12170	COG0745	RESPONSE REGULATOR receiver
DA787_12175	COG0750	zinc metalloprotease
DA787_12180	COG0497	DNA recombination
DA787_12185	COG1438	arginine binding
DA787_12190	COG1189	Ribosomal RNA methyltransferase RrmJ FtsJ
DA787_12195	COG1154	Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP)
DA787_12200	COG0142	geranyltranstransferase activity
DA787_12205	COG1722	exodeoxyribonuclease VII activity
DA787_12210	COG1570	exodeoxyribonuclease VII activity
DA787_12215	COG0190	Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate
DA787_12220	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
DA787_12225	COG1302	Protein conserved in bacteria
DA787_12230	COG0439	Biotin carboxylase
DA787_12235	COG0511	ligase activity, forming carbon-carbon bonds
DA787_12275	COG3854	ATPases associated with a variety of cellular activities
DA787_12285	COG0231	Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
DA787_12290	COG0006	proline dipeptidase activity
DA787_12295	COG0757	Catalyzes a trans-dehydration via an enolate intermediate
DA787_12305	COG3872	metal-dependent enzyme
DA787_12315	COG1752	Esterase of the alpha-beta hydrolase superfamily
DA787_12320	COG1321	iron dependent repressor
DA787_12325	COG0095	Lipoate-protein ligase
DA787_12330	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
DA787_12335	COG1003	The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor
DA787_12340	COG0403	The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor
DA787_12345	COG0404	The glycine cleavage system catalyzes the degradation of glycine
DA787_12350	COG0553	Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair
DA787_12365	COG1396	sequence-specific DNA binding
DA787_12375	COG0681	Belongs to the peptidase S26 family
DA787_12400	COG4940	Competence protein ComGF
DA787_12410	COG4970	Tfp pilus assembly protein FimT
DA787_12415	COG4537	Required for transformation and DNA binding
DA787_12420	COG1459	type II secretion system
DA787_12425	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
DA787_12435	COG0598	Magnesium transport protein CorA
DA787_12440	COG1253	flavin adenine dinucleotide binding
DA787_12445	COG1366	Belongs to the anti-sigma-factor antagonist family
DA787_12455	COG1393	Belongs to the ArsC family
DA787_12465	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
DA787_12475	COG0011	TIGRFAM Protein of
DA787_12485	COG2866	Carboxypeptidase
DA787_12490	COG1368	sulfuric ester hydrolase activity
DA787_12495	COG1940	carbohydrate kinase activity
DA787_12500	COG4483	Protein conserved in bacteria
DA787_12505	COG0705	Rhomboid family
DA787_12505	COG0457	Tetratricopeptide repeat
DA787_12515	COG0212	Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
DA787_12520	COG0267	Belongs to the bacterial ribosomal protein bL33 family
DA787_12525	COG0438	transferase activity, transferring glycosyl groups
DA787_12540	COG1559	Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
DA787_12545	COG1117	ATPase-coupled phosphate ion transmembrane transporter activity
DA787_12550	COG1117	ATPase-coupled phosphate ion transmembrane transporter activity
DA787_12555	COG0581	inorganic phosphate transmembrane transporter activity
DA787_12560	COG0573	inorganic phosphate transmembrane transporter activity
DA787_12565	COG0226	Part of the ABC transporter complex PstSACB involved in phosphate import
DA787_12575	COG0477	Major facilitator Superfamily
DA787_12580	COG0605	Destroys radicals which are normally produced within the cells and which are toxic to biological systems
DA787_12585	COG2839	Protein conserved in bacteria
DA787_12590	COG5521	maltodextrose utilization protein MalA
DA787_12600	COG1388	LysM domain
DA787_12605	COG0821	Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate
DA787_12610	COG4709	membrane
DA787_12615	COG5663	Belongs to the 5'(3')-deoxyribonucleotidase family
DA787_12620	COG0735	belongs to the Fur family
DA787_12625	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
DA787_12635	COG0648	Endonuclease IV plays a role in DNA repair. It cleaves phosphodiester bonds at apurinic or apyrimidinic sites (AP sites) to produce new 5'-ends that are base-free deoxyribose 5-phosphate residues. It preferentially attacks modified AP sites created by bleomycin and neocarzinostatin
DA787_12640	COG0513	Belongs to the DEAD box helicase family
DA787_12650	COG0761	Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)- butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP MEP pathway for isoprenoid precursor biosynthesis
DA787_12655	COG0327	Belongs to the GTP cyclohydrolase I type 2 NIF3 family
DA787_12660	COG2384	SAM-dependent methyltransferase
DA787_12665	COG2010	Cytochrome c
DA787_12675	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
DA787_12680	COG0358	DNA primase activity
DA787_12685	COG1671	Belongs to the UPF0178 family
DA787_12690	COG1806	Bifunctional serine threonine kinase and phosphorylase involved in the regulation of the
DA787_12695	COG0517	IMP dehydrogenase activity
DA787_12700	COG0751	glycine-tRNA ligase activity
DA787_12705	COG0752	glycyl-tRNA synthetase alpha subunit
DA787_12710	COG1381	Involved in DNA repair and RecF pathway recombination
DA787_12720	COG1159	An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism
DA787_12725	COG0295	cytidine deaminase activity
DA787_12730	COG0818	Recycling of diacylglycerol produced during the turnover of membrane phospholipid
DA787_12735	COG0319	Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA
DA787_12740	COG1480	7TM receptor with intracellular HD hydrolase
DA787_12745	COG1702	phosphate starvation-inducible protein PhoH
DA787_12750	COG0561	phosphatase activity
DA787_12765	COG4864	UPF0365 protein
DA787_12770	COG1030	water channel activity
DA787_12775	COG1610	YqeY-like protein
DA787_12780	COG0828	Belongs to the bacterial ribosomal protein bS21 family
DA787_12785	COG1283	sodium-dependent phosphate transmembrane transporter activity
DA787_12790	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
DA787_12795	COG1385	rRNA (uridine-N3-)-methyltransferase activity
DA787_12800	COG2264	protein methyltransferase activity
DA787_12805	COG0484	heat shock protein binding
DA787_12810	COG0443	Heat shock 70 kDa protein
DA787_12815	COG0576	Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ
DA787_12820	COG1420	regulation of RNA biosynthetic process
DA787_12825	COG0635	Involved in the biosynthesis of porphyrin-containing compound
DA787_12830	COG0481	GTPase activity
DA787_12840	COG0860	N-Acetylmuramoyl-L-alanine amidase
DA787_12845	COG0680	Initiates the rapid degradation of small, acid-soluble proteins during spore germination
DA787_12850	COG0268	Binds directly to 16S ribosomal RNA
DA787_12855	COG1466	dna polymerase III delta subunit
DA787_12870	COG0658	competence protein
DA787_12870	COG2333	competence protein COMEC
DA787_12875	COG2131	deaminase
DA787_12880	COG1596	polysaccharide export
DA787_12880	COG1555	photosystem II stabilization
DA787_12885	COG0345	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
DA787_12890	COG2226	methyltransferase
DA787_12895	COG0799	negative regulation of ribosome biogenesis
DA787_12900	COG1713	HD superfamily hydrolase involved in NAD metabolism
DA787_12905	COG1057	Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD)
DA787_12910	COG1534	Rna-binding protein
DA787_12915	COG0169	Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA)
DA787_12920	COG1161	Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity
DA787_12925	COG2179	HAD superfamily (subfamily IIIA) phosphatase, TIGR01668
DA787_12935	COG2755	lipolytic protein G-D-S-L family
DA787_12940	COG5632	N-Acetylmuramoyl-L-alanine amidase
DA787_12940	COG3409	Peptidoglycan-binding domain 1 protein
DA787_12945	COG0398	Pfam SNARE associated Golgi protein
DA787_12950	COG1023	phosphogluconate dehydrogenase (decarboxylating) activity
DA787_12960	COG3209	COG3209 Rhs family protein
DA787_12970	COG1961	COG1961 Site-specific recombinases, DNA invertase Pin homologs
DA787_12980	COG0394	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
DA787_12985	COG0798	PFAM Bile acid sodium symporter
DA787_12990	COG0346	lactoylglutathione lyase activity
DA787_12995	COG0640	Transcriptional regulator
DA787_13000	COG3403	YqcI/YcgG family
DA787_13005	COG0457	Tetratricopeptide repeat
DA787_13020	COG5444	nuclease activity
DA787_13045	COG3409	Peptidoglycan-binding domain 1 protein
DA787_13045	COG5632	N-Acetylmuramoyl-L-alanine amidase
DA787_13050	COG4824	toxin secretion phage lysis holin
DA787_13080	COG3778	Protein conserved in bacteria
DA787_13085	COG3299	homolog of phage Mu protein gp47
DA787_13090	COG3628	GPW Gp25 family protein
DA787_13100	COG4193	domain, Protein
DA787_13105	COG1652	LysM domain
DA787_13110	COG5280	Phage tail tape measure protein TP901
DA787_13110	COG3953	SLT domain
DA787_13175	COG4653	Phage capsid family
DA787_13180	COG0338	D12 class N6 adenine-specific DNA methyltransferase
DA787_13190	COG2369	cell adhesion
DA787_13195	COG5518	Phage portal protein
DA787_13200	COG1783	phage Terminase large subunit
DA787_13205	COG5484	DNA packaging
DA787_13215	COG3677	Transposase
DA787_13230	COG4570	Endonuclease that resolves Holliday junction intermediates made during homologous genetic recombination and DNA repair. Exhibits sequence and structure-selective cleavage of four-way DNA junctions, where it introduces symmetrical nicks in two strands of the same polarity at the 5' side of dinucleotides. Corrects the defects in genetic recombination and DNA repair associated with inactivation of ruvAB or ruvC
DA787_13240	COG1484	DNA-dependent DNA replication
DA787_13245	COG3935	DnaD domain protein
DA787_13250	COG3723	Recombinational DNA repair protein, rece pathway
DA787_13255	COG5377	YqaJ viral recombinase family
DA787_13285	COG1476	TRANSCRIPTIONal
DA787_13290	COG3620	sequence-specific DNA binding
DA787_13300	COG0563	adenylate kinase activity
DA787_13305	COG2856	Zn peptidase
DA787_13330	COG3223	Belongs to the PsiE family
DA787_13335	COG0642	Histidine kinase
DA787_13335	COG5002	protein histidine kinase activity
DA787_13340	COG0745	RESPONSE REGULATOR receiver
DA787_13345	COG2311	Membrane
DA787_13355	COG0454	-acetyltransferase
DA787_13360	COG2249	NAD(P)H dehydrogenase (quinone) activity
DA787_13370	COG0730	response to heat
DA787_13375	COG0425	Belongs to the sulfur carrier protein TusA family
DA787_13380	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
DA787_13380	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
DA787_13390	COG0425	Belongs to the sulfur carrier protein TusA family
DA787_13390	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
DA787_13400	COG2210	Belongs to the sulfur carrier protein TusA family
DA787_13405	COG1937	Protein conserved in bacteria
DA787_13420	COG0662	Cupin 2, conserved barrel domain protein
DA787_13435	COG0789	Transcriptional regulator
DA787_13435	COG4978	Transcriptional regulator
DA787_13440	COG2814	Major facilitator Superfamily
DA787_13445	COG0456	acetyltransferase
DA787_13450	COG1253	flavin adenine dinucleotide binding
DA787_13460	COG0697	spore germination
DA787_13465	COG0583	DNA-binding transcription factor activity
DA787_13470	COG2072	flavoprotein involved in K transport
DA787_13475	COG1230	cation diffusion facilitator family transporter
DA787_13480	COG1942	4-Oxalocrotonate Tautomerase
DA787_13485	COG0583	DNA-binding transcription factor activity
DA787_13495	COG1114	Component of the transport system for branched-chain amino acids
DA787_13500	COG1687	branched-chain amino acid
DA787_13505	COG1296	Branched-chain amino acid permease (Azaleucine resistance)
DA787_13510	COG1522	sequence-specific DNA binding
DA787_13515	COG2732	(Barnase) inhibitor
DA787_13520	COG2124	cytochrome p450
DA787_13530	COG1335	isochorismatase
DA787_13545	COG2318	DinB family
DA787_13555	COG2070	2-Nitropropane dioxygenase
DA787_13570	COG0796	Provides the (R)-glutamate required for cell wall biosynthesis
DA787_13590	COG3443	Belongs to the bacterial solute-binding protein 9 family
DA787_13595	COG1595	DNA-templated transcription, initiation
DA787_13600	COG0667	Aldo Keto reductase
DA787_13605	COG2851	Citrate transporter
DA787_13610	COG0583	DNA-binding transcription factor activity
DA787_13615	COG2828	Protein conserved in bacteria
DA787_13620	COG3409	Peptidoglycan-binding domain 1 protein
DA787_13625	COG5566	PFAM Mor transcription activator
DA787_13630	COG0596	Alpha beta hydrolase
DA787_13635	COG4991	sh3 domain protein
DA787_13640	COG4991	sh3 domain protein
DA787_13650	COG0346	lactoylglutathione lyase activity
DA787_13660	COG5577	PFAM Coat F domain
DA787_13665	COG1063	alcohol dehydrogenase
DA787_13675	COG5577	PFAM Coat F domain
DA787_13680	COG0789	Transcriptional regulator
DA787_13690	COG1064	alcohol dehydrogenase
DA787_13695	COG0693	protein deglycase activity
DA787_13700	COG1621	beta-fructofuranosidase activity
DA787_13705	COG3716	PTS system mannose fructose sorbose family IID component
DA787_13710	COG3715	PTS system
DA787_13715	COG3444	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
DA787_13720	COG2893	phosphoenolpyruvate-dependent sugar phosphotransferase system
DA787_13725	COG1221	Transcriptional regulators containing an AAA-type ATPase domain and a DNA-binding domain
DA787_13725	COG3933	PFAM sigma-54 factor interaction domain-containing protein
DA787_13735	COG1113	amino acid transport
DA787_13740	COG1280	lysine exporter protein (LysE YggA)
DA787_13745	COG1378	Sugar-specific transcriptional regulator TrmB
DA787_13750	COG1595	DNA-templated transcription, initiation
DA787_13760	COG2755	lipolytic protein G-D-S-L family
DA787_13760	COG1835	transferase activity, transferring acyl groups other than amino-acyl groups
DA787_13770	COG2124	cytochrome p450
DA787_13770	COG0369	Component of the sulfite reductase complex that catalyzes the 6-electron reduction of sulfite to sulfide. This is one of several activities required for the biosynthesis of L- cysteine from sulfate. The flavoprotein component catalyzes the electron flow from NADPH - FAD - FMN to the hemoprotein component
DA787_13775	COG1309	transcriptional regulator
DA787_13780	COG2226	methyltransferase
DA787_13795	COG2116	formate transmembrane transporter activity
DA787_13800	COG5609	conserved protein (DUF2294)
DA787_13805	COG3383	formate dehydrogenase (NAD+) activity
DA787_13810	COG2427	Protein of unknown function (DUF1641)
DA787_13820	COG0626	cystathionine gamma-synthase activity
DA787_13825	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
DA787_13830	COG0775	Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
DA787_13835	COG2226	methyltransferase
DA787_13850	COG0768	penicillin binding
DA787_13855	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
DA787_13860	COG0572	uridine kinase
DA787_13880	COG1559	Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
DA787_13885	COG3906	Belongs to the UPF0473 family
DA787_13890	COG0816	Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA
DA787_13895	COG4472	Bacterial protein of unknown function (DUF965)
DA787_13900	COG0013	Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
DA787_13905	COG0628	permease
DA787_13910	COG1126	abc transporter atp-binding protein
DA787_13915	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
DA787_13920	COG0765	amino acid transport
DA787_13925	COG0765	amino acid transport
DA787_13940	COG3881	PFAM PRC-barrel domain
DA787_13945	COG0507	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD
DA787_13950	COG0457	Tetratricopeptide repeat
DA787_13955	COG0482	sulfurtransferase activity
DA787_13960	COG1104	cysteine desulfurase activity
DA787_13965	COG1959	2 iron, 2 sulfur cluster binding
DA787_13970	COG2256	atpase related to the helicase subunit of the holliday junction resolvase
DA787_13975	COG1179	involved in molybdopterin and THIamine biosynthesis family 1
DA787_13985	COG0173	Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp Asn)
DA787_13990	COG0124	histidyl-tRNA synthetase
DA787_14000	COG0860	N-Acetylmuramoyl-L-alanine amidase
DA787_14000	COG3103	Sh3 type 3 domain protein
DA787_14000	COG4991	sh3 domain protein
DA787_14005	COG1490	D-aminoacyl-tRNA deacylase activity
DA787_14010	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
DA787_14015	COG0503	Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
DA787_14020	COG4199	Single-strand DNA-specific exonuclease, C terminal domain
DA787_14020	COG0608	single-stranded DNA 5'-3' exodeoxyribonuclease activity
DA787_14025	COG5416	Lipopolysaccharide assembly protein A domain
DA787_14030	COG0490	domain, Protein
DA787_14035	COG0341	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
DA787_14035	COG0342	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
DA787_14045	COG2244	polysaccharide biosynthetic process
DA787_14050	COG2323	membrane
DA787_14060	COG1862	Preprotein translocase
DA787_14065	COG0343	queuine tRNA-ribosyltransferase activity
DA787_14070	COG0809	Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA)
DA787_14080	COG2255	four-way junction helicase activity
DA787_14085	COG0632	four-way junction helicase activity
DA787_14095	COG2814	Major facilitator Superfamily
DA787_14100	COG0673	inositol 2-dehydrogenase activity
DA787_14105	COG2112	serine threonine protein kinase
DA787_14125	COG1115	amino acid carrier protein
DA787_14130	COG0217	transcriptional regulatory protein
DA787_14140	COG1388	LysM domain
DA787_14145	COG0379	Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate
DA787_14150	COG0157	Belongs to the NadC ModD family
DA787_14155	COG0029	Catalyzes the oxidation of L-aspartate to iminoaspartate
DA787_14160	COG1104	cysteine desulfurase activity
DA787_14165	COG1827	regulation of RNA biosynthetic process
DA787_14170	COG0077	Prephenate dehydratase
DA787_14175	COG4492	Belongs to the UPF0735 family
DA787_14180	COG0536	An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control
DA787_14185	COG3290	protein histidine kinase activity
DA787_14195	COG0211	Belongs to the bacterial ribosomal protein bL27 family
DA787_14200	COG2868	ribosomal protein
DA787_14205	COG0261	This protein binds to 23S rRNA in the presence of protein L20
DA787_14210	COG1994	Peptidase M50
DA787_14215	COG0739	heme binding
DA787_14220	COG2894	cell division
DA787_14225	COG0850	regulation of cytokinetic process
DA787_14230	COG2891	Involved in formation of the rod shape of the cell. May also contribute to regulation of formation of penicillin-binding proteins
DA787_14235	COG1792	Involved in formation and maintenance of cell shape
DA787_14240	COG1077	Cell shape determining protein MreB Mrl
DA787_14245	COG2003	Belongs to the UPF0758 family
DA787_14250	COG0424	maF-like protein
DA787_14260	COG1989	Cleaves type-4 fimbrial leader sequence and methylates the N-terminal (generally Phe) residue
DA787_14265	COG0285	dihydrofolate synthase activity
DA787_14270	COG0525	valine-tRNA ligase activity
DA787_14280	COG2334	A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response
DA787_14285	COG1388	LysM domain
DA787_14290	COG0001	glutamate-1-semialdehyde 2,1-aminomutase activity
DA787_14295	COG0113	porphobilinogen synthase activity
DA787_14300	COG1587	Uroporphyrinogen-III synthase
DA787_14305	COG0181	hydroxymethylbilane synthase activity
DA787_14310	COG0755	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
DA787_14315	COG0373	Catalyzes the NADPH-dependent reduction of glutamyl- tRNA(Glu) to glutamate 1-semialdehyde (GSA)
DA787_14325	COG0218	Necessary for normal cell division and for the maintenance of normal septation
DA787_14330	COG0466	ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner
DA787_14335	COG0470	DNA polymerase III
DA787_14335	COG1067	ATP-dependent peptidase activity
DA787_14340	COG1219	ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP
DA787_14345	COG0544	peptidyl-prolyl cis-trans isomerase activity
DA787_14350	COG1477	protein flavinylation
DA787_14350	COG0457	Tetratricopeptide repeat
DA787_14355	COG0066	3-isopropylmalate dehydratase activity
DA787_14360	COG0065	Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate
DA787_14365	COG0473	3-isopropylmalate dehydrogenase activity
DA787_14370	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
DA787_14375	COG0059	Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate
DA787_14380	COG0440	acetolactate synthase activity
DA787_14385	COG0028	Belongs to the TPP enzyme family
DA787_14395	COG0454	-acetyltransferase
DA787_14400	COG3861	electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity
DA787_14410	COG0622	Phosphoesterase
DA787_14415	COG0127	Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions
DA787_14420	COG0689	Phosphorolytic exoribonuclease that removes nucleotide residues following the -CCA terminus of tRNA and adds nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates
DA787_14425	COG5401	PFAM Sporulation and spore germination
DA787_14430	COG0796	Provides the (R)-glutamate required for cell wall biosynthesis
DA787_14435	COG1846	Transcriptional regulator
DA787_14440	COG2197	response regulator
DA787_14445	COG0824	Thioesterase
DA787_14450	COG0479	Belongs to the succinate dehydrogenase fumarate reductase iron-sulfur protein family
DA787_14455	COG1053	succinate dehydrogenase
DA787_14460	COG2009	succinate dehydrogenase
DA787_14465	COG1719	4-vinyl reductase, 4VR
DA787_14470	COG0527	aspartate kinase activity
DA787_14480	COG0322	excinuclease ABC activity
DA787_14485	COG3118	belongs to the thioredoxin family
DA787_14495	COG3534	alpha-L-arabinofuranosidase
DA787_14500	COG2025	fatty acid beta-oxidation using acyl-CoA dehydrogenase
DA787_14505	COG2086	electron transfer activity
DA787_14510	COG1024	Enoyl-CoA hydratase
DA787_14515	COG1309	transcriptional regulator
DA787_14520	COG0318	PFAM AMP-dependent synthetase and ligase
DA787_14525	COG3766	membrane
DA787_14530	COG1193	negative regulation of DNA recombination
DA787_14535	COG1387	Histidinol phosphatase and related hydrolases of the PHP family
DA787_14535	COG1796	DNA polymerase
DA787_14540	COG1286	toxin biosynthetic process
DA787_14545	COG3027	Activator of cell division through the inhibition of FtsZ GTPase activity, therefore promoting FtsZ assembly into bundles of protofilaments necessary for the formation of the division Z ring. It is recruited early at mid-cell but it is not essential for cell division
DA787_14550	COG1039	Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
DA787_14555	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
DA787_14555	COG0072	phenylalanine-tRNA ligase activity
DA787_14560	COG0016	Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily
DA787_14570	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
DA787_14580	COG3835	regulator
DA787_14585	COG0277	FAD linked oxidase domain protein
DA787_14590	COG0247	lactate metabolic process
DA787_14595	COG0346	lactoylglutathione lyase activity
DA787_14605	COG1966	Carbon starvation protein
DA787_14610	COG3534	alpha-L-arabinofuranosidase
DA787_14615	COG0395	ABC-type sugar transport system, permease component
DA787_14620	COG1175	transmembrane transport
DA787_14625	COG1653	transport
DA787_14630	COG0371	Dehydrogenase
DA787_14635	COG0647	UMP catabolic process
DA787_14640	COG0235	Class ii aldolase
DA787_14645	COG1069	ribulokinase activity
DA787_14650	COG2160	L-arabinose isomerase activity
DA787_14655	COG3507	Belongs to the glycosyl hydrolase 43 family
DA787_14660	COG1363	Peptidase, m42
DA787_14670	COG3326	Membrane
DA787_14675	COG0292	Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit
DA787_14680	COG0291	Belongs to the bacterial ribosomal protein bL35 family
DA787_14685	COG0290	IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins
DA787_14695	COG1346	cytolysis
DA787_14700	COG1380	Effector of murein hydrolase LrgA
DA787_14705	COG3279	Response regulator of the LytR AlgR family
DA787_14710	COG3275	phosphorelay sensor kinase activity
DA787_14720	COG0441	Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
DA787_14730	COG0398	Pfam SNARE associated Golgi protein
DA787_14735	COG1484	DNA-dependent DNA replication
DA787_14740	COG3611	Membrane attachment protein
DA787_14745	COG1327	Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes
DA787_14750	COG1586	Catalyzes the decarboxylation of S-adenosylmethionine to S-adenosylmethioninamine (dcAdoMet), the propylamine donor required for the synthesis of the polyamines spermine and spermidine from the diamine putrescine
DA787_14755	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
DA787_14760	COG1733	regulation of RNA biosynthetic process
DA787_14765	COG2814	Major facilitator Superfamily
DA787_14770	COG0656	L-ascorbic acid biosynthetic process
DA787_14775	COG0237	dephospho-CoA kinase activity
DA787_14780	COG1971	Probably functions as a manganese efflux pump
DA787_14785	COG0266	class I DNA-(apurinic or apyrimidinic site) endonuclease activity
DA787_14790	COG0749	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
DA787_14790	COG0258	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
DA787_14795	COG5002	protein histidine kinase activity
DA787_14800	COG0745	RESPONSE REGULATOR receiver
DA787_14810	COG0039	L-malate dehydrogenase activity
DA787_14815	COG0538	isocitrate dehydrogenase activity
DA787_14820	COG0372	Belongs to the citrate synthase family
DA787_14825	COG2707	UPF0756 membrane protein
DA787_14830	COG0628	permease
DA787_14835	COG3030	protein affecting phage T7 exclusion by the F plasmid
DA787_14840	COG0469	pyruvate kinase activity
DA787_14845	COG0205	6-phosphofructokinase activity
DA787_14850	COG0825	malonyl-CoA metabolic process
DA787_14855	COG0777	Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA
DA787_14860	COG0281	malic enzyme
DA787_14865	COG0587	DNA-directed DNA polymerase activity
DA787_14885	COG0618	3'(2'),5'-bisphosphate nucleotidase activity
DA787_14895	COG4109	DRTGG domain
DA787_14900	COG0730	response to heat
DA787_14905	COG1473	amidohydrolase
DA787_14910	COG0196	riboflavin kinase activity
DA787_14915	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
DA787_14920	COG0695	Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins
DA787_14925	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
DA787_14930	COG1126	abc transporter atp-binding protein
DA787_14935	COG0765	amino acid transport
DA787_14940	COG0765	amino acid transport
DA787_14945	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
DA787_14950	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
DA787_14955	COG0454	-acetyltransferase
DA787_14960	COG0583	DNA-binding transcription factor activity
DA787_14965	COG2220	Zn-dependent hydrolases of the beta-lactamase fold
DA787_14970	COG1028	Short-chain dehydrogenase reductase Sdr
DA787_14980	COG0165	Argininosuccinate lyase
DA787_14985	COG0137	argininosuccinate synthase activity
DA787_14990	COG0521	Mo-molybdopterin cofactor biosynthetic process
DA787_14995	COG0282	Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
DA787_15005	COG0827	DNA restriction-modification system
DA787_15010	COG2077	Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides
DA787_15015	COG3874	Sporulation protein YtfJ
DA787_15025	COG1714	RDD family
DA787_15030	COG0616	signal peptide processing
DA787_15035	COG0061	Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
DA787_15040	COG1574	metal-dependent hydrolase with the TIM-barrel fold
DA787_15045	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
DA787_15055	COG0301	tRNA thio-modification
DA787_15060	COG1104	cysteine desulfurase activity
DA787_15065	COG1114	Component of the transport system for branched-chain amino acids
DA787_15070	COG4477	modulates the frequency and position of FtsZ ring formation. Inhibits FtsZ ring formation at polar sites. Interacts either with FtsZ or with one of its binding partners to promote depolymerization
DA787_15075	COG1387	Histidinol phosphatase and related hydrolases of the PHP family
DA787_15080	COG1309	transcriptional regulator
DA787_15085	COG1956	GAF domain-containing protein
DA787_15090	COG2203	Gaf domain
DA787_15090	COG2199	diguanylate cyclase activity
DA787_15100	COG0522	One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit
DA787_15105	COG0162	Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
DA787_15110	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
DA787_15115	COG0454	-acetyltransferase
DA787_15120	COG0517	IMP dehydrogenase activity
DA787_15125	COG0123	including yeast histone deacetylase and acetoin utilization protein
DA787_15130	COG1360	Flagellar Motor Protein
DA787_15135	COG1291	archaeal or bacterial-type flagellum-dependent cell motility
DA787_15140	COG1609	Transcriptional regulator
DA787_15145	COG1605	Chorismate mutase
DA787_15145	COG2876	3-deoxy-7-phosphoheptulonate synthase activity
DA787_15150	COG3118	belongs to the thioredoxin family
DA787_15155	COG4980	gas vesicle protein
DA787_15160	COG4768	protein containing a divergent version of the methyl-accepting chemotaxis-like domain
DA787_15165	COG0773	UDP-N-acetylmuramate-L-alanine ligase activity
DA787_15170	COG1674	ftsk spoiiie
DA787_15175	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
DA787_15180	COG4848	Belongs to the UPF0354 family
DA787_15185	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
DA787_15200	COG1363	Peptidase, m42
DA787_15205	COG5584	Small secreted protein
DA787_15210	COG0281	malic enzyme
DA787_15215	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
DA787_15220	COG0220	tRNA (guanine-N7-)-methyltransferase activity
DA787_15230	COG0510	thiamine kinase activity
DA787_15235	COG1523	belongs to the glycosyl hydrolase 13 family
DA787_15240	COG1597	lipid kinase activity
DA787_15250	COG1514	Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'- phosphomonoester
DA787_15255	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
DA787_15260	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
DA787_15265	COG2252	PERMEase
DA787_15270	COG4473	ABC transporter
DA787_15275	COG1131	(ABC) transporter
DA787_15280	COG1349	DNA-binding transcription factor activity
DA787_15285	COG1187	pseudouridine synthase activity
DA787_15290	COG2244	polysaccharide biosynthetic process
DA787_15295	COG2081	HI0933 family
DA787_15300	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
DA787_15310	COG5578	integral membrane protein
DA787_15315	COG0673	inositol 2-dehydrogenase activity
DA787_15320	COG1653	transport
DA787_15325	COG4225	unsaturated rhamnogalacturonyl hydrolase activity
DA787_15330	COG4209	transmembrane transport
DA787_15335	COG2207	Transcriptional regulator
DA787_15340	COG1653	transport
DA787_15345	COG0395	ABC-type sugar transport system, permease component
DA787_15350	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
DA787_15355	COG2124	cytochrome p450
DA787_15360	COG0502	Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical- based mechanism
DA787_15365	COG0132	Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8-diaminopelargonic acid (DAPA) to form an ureido ring
DA787_15370	COG0156	8-amino-7-oxononanoate synthase activity
DA787_15375	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
DA787_15380	COG1424	Catalyzes the transformation of pimelate into pimeloyl- CoA with concomitant hydrolysis of ATP to AMP
DA787_15385	COG1073	alpha beta
DA787_15410	COG1486	melibiose metabolic process
DA787_15415	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
DA787_15420	COG0495	leucyl-tRNA aminoacylation
DA787_15430	COG2202	Pas domain
DA787_15430	COG1366	Belongs to the anti-sigma-factor antagonist family
DA787_15435	COG2814	Major facilitator Superfamily
DA787_15440	COG2433	Pfam Transposase IS66
DA787_15445	COG0577	efflux transmembrane transporter activity
DA787_15450	COG1136	(ABC) transporter
DA787_15455	COG2205	protein histidine kinase activity
DA787_15460	COG0745	RESPONSE REGULATOR receiver
DA787_15465	COG0577	efflux transmembrane transporter activity
DA787_15470	COG1136	(ABC) transporter
DA787_15485	COG1131	(ABC) transporter
DA787_15490	COG1725	Transcriptional regulator
DA787_15505	COG1242	4 iron, 4 sulfur cluster binding
DA787_15510	COG2519	Catalyzes the S-adenosyl-L-methionine-dependent formation of N(1)-methyladenine at position 58 (m1A58) in tRNA
DA787_15520	COG2267	carboxylic ester hydrolase activity
DA787_15525	COG0663	COG0663 Carbonic anhydrases acetyltransferases, isoleucine patch superfamily
DA787_15530	COG1113	amino acid transport
DA787_15535	COG0367	asparagine synthase
DA787_15540	COG0192	Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme
DA787_15545	COG1866	Involved in the gluconeogenesis. Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP) through direct phosphoryl transfer between the nucleoside triphosphate and OAA
DA787_15555	COG1506	peptidase
DA787_15560	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
DA787_15565	COG1116	anion transmembrane transporter activity
DA787_15570	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
DA787_15575	COG0494	nUDIX hydrolase
DA787_15580	COG4824	toxin secretion phage lysis holin
DA787_15585	COG0783	Belongs to the Dps family
DA787_15600	COG1854	S-ribosylhomocysteine lyase activity
DA787_15605	COG0759	Could be involved in insertion of integral membrane proteins into the membrane
DA787_15610	COG0288	reversible hydration of carbon dioxide
DA787_15615	COG0254	rRNA binding
DA787_15620	COG1271	oxidase subunit
DA787_15625	COG1294	oxidase, subunit
DA787_15635	COG1108	ABC-type Mn2 Zn2 transport systems permease components
DA787_15640	COG1108	ABC-type Mn2 Zn2 transport systems permease components
DA787_15640	COG1321	iron dependent repressor
DA787_15645	COG1121	(ABC) transporter
DA787_15650	COG0803	Belongs to the bacterial solute-binding protein 9 family
DA787_15660	COG4948	Mandelate Racemase Muconate Lactonizing
DA787_15665	COG0318	PFAM AMP-dependent synthetase and ligase
DA787_15670	COG0447	Converts o-succinylbenzoyl-CoA (OSB-CoA) to 1,4- dihydroxy-2-naphthoyl-CoA (DHNA-CoA)
DA787_15675	COG0596	Alpha beta hydrolase
DA787_15680	COG1165	Catalyzes the thiamine diphosphate-dependent decarboxylation of 2-oxoglutarate and the subsequent addition of the resulting succinic semialdehyde-thiamine pyrophosphate anion to isochorismate to yield 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylate (SEPHCHC)
DA787_15685	COG1169	isochorismate synthase
DA787_15690	COG1734	Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters
DA787_15695	COG1210	Utp--glucose-1-phosphate uridylyltransferase
DA787_15700	COG1004	Belongs to the UDP-glucose GDP-mannose dehydrogenase family
DA787_15705	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
DA787_15710	COG0438	transferase activity, transferring glycosyl groups
DA787_15720	COG2334	A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response
DA787_15725	COG0438	transferase activity, transferring glycosyl groups
DA787_15730	COG2334	A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response
DA787_15735	COG3476	COG3476 Tryptophan-rich sensory protein (mitochondrial benzodiazepine receptor homolog)
DA787_15740	COG0058	SHG alpha-glucan phosphorylase activity
DA787_15745	COG0297	glycogen (starch) synthase activity
DA787_15750	COG0448	Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans
DA787_15755	COG0448	Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans
DA787_15760	COG0296	Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position
DA787_15885	COG3859	Proton-coupled thiamine transporter YuaJ
DA787_15890	COG1247	-acetyltransferase
DA787_15895	COG2268	Band 7 protein
DA787_15900	COG1585	Membrane protein implicated in regulation of membrane protease activity
DA787_15905	COG2318	DinB family
DA787_15915	COG1454	alcohol dehydrogenase
DA787_15925	COG1510	regulation of RNA biosynthetic process
DA787_15935	COG0569	domain protein
DA787_15940	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
DA787_15945	COG4682	membrane
DA787_15950	COG1705	Flagellar rod assembly protein muramidase FlgJ
DA787_15955	COG0477	Major facilitator Superfamily
DA787_15960	COG5553	Cysteine dioxygenase type I
DA787_15970	COG1968	undecaprenyl-diphosphatase activity
DA787_15975	COG0628	permease
DA787_15980	COG0673	inositol 2-dehydrogenase activity
DA787_15985	COG4806	L-rhamnose isomerase
DA787_15990	COG3254	rhamnose metabolic process
DA787_15995	COG1070	Carbohydrate kinase
DA787_16000	COG1349	DNA-binding transcription factor activity
DA787_16005	COG1028	Short-chain dehydrogenase reductase Sdr
DA787_16005	COG3347	Dehydrogenase
DA787_16015	COG0840	transmembrane signaling receptor activity
DA787_16020	COG0840	transmembrane signaling receptor activity
DA787_16025	COG0840	transmembrane signaling receptor activity
DA787_16030	COG0840	transmembrane signaling receptor activity
DA787_16045	COG0432	Pfam Uncharacterised protein family UPF0047
DA787_16055	COG0366	Alpha amylase catalytic
DA787_16060	COG1253	flavin adenine dinucleotide binding
DA787_16065	COG2738	Putative neutral zinc metallopeptidase
DA787_16080	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
DA787_16095	COG0166	Belongs to the GPI family
DA787_16100	COG1979	alcohol dehydrogenase
DA787_16105	COG1979	alcohol dehydrogenase
DA787_16110	COG2155	Conserved Protein
DA787_16115	COG1098	S1 RNA binding domain
DA787_16120	COG0436	Aminotransferase
DA787_16125	COG1522	sequence-specific DNA binding
DA787_16130	COG2267	carboxylic ester hydrolase activity
DA787_16140	COG1168	Bifunctional PLP-dependent enzyme with beta-cystaTHIonase and maltose regulon repressor activities
DA787_16145	COG2205	protein histidine kinase activity
DA787_16155	COG5018	Exonuclease
DA787_16165	COG2814	Major facilitator Superfamily
DA787_16170	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
DA787_16175	COG3011	Protein conserved in bacteria
DA787_16185	COG3290	protein histidine kinase activity
DA787_16190	COG4565	transcriptional regulatory protein
DA787_16215	COG3493	citrate carrier protein
DA787_16225	COG2111	Na H antiporter
DA787_16225	COG1009	NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit
DA787_16230	COG2111	Na H antiporter
DA787_16235	COG1006	Multisubunit Na H antiporter MnhC subunit
DA787_16240	COG0651	ATP synthesis coupled electron transport
DA787_16245	COG1863	multisubunit Na H antiporter MnhE subunit
DA787_16250	COG2212	antiporter activity
DA787_16255	COG1320	monovalent cation:proton antiporter activity
DA787_16260	COG2050	protein possibly involved in aromatic compounds catabolism
DA787_16265	COG2197	response regulator
DA787_16270	COG4585	Histidine kinase
DA787_16280	COG0142	geranyltranstransferase activity
DA787_16300	COG3434	signal transduction protein containing EAL and modified HD-GYP domains
DA787_16305	COG1488	Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP
DA787_16310	COG1335	isochorismatase
DA787_16315	COG5506	Protein of unknown function (DUF1694)
DA787_16330	COG0628	permease
DA787_16345	COG1418	mRNA catabolic process
DA787_16350	COG1028	Short-chain dehydrogenase reductase Sdr
DA787_16360	COG1511	domain protein
DA787_16365	COG1674	ftsk spoiiie
DA787_16365	COG0433	COG0433 Predicted ATPase
DA787_16370	COG4499	WXG100 protein secretion system (Wss), protein YukC
DA787_16375	COG5417	Belongs to the EsaB family
DA787_16380	COG4842	Belongs to the WXG100 family
DA787_16385	COG4465	DNA-binding protein that represses the expression of many genes that are induced as cells make the transition from rapid exponential growth to stationary phase. It is a GTP-binding protein that senses the intracellular GTP concentration as an indicator of nutritional limitations. At low GTP concentration it no longer binds GTP and stop to act as a transcriptional repressor
DA787_16385	COG2508	Transcriptional regulator
DA787_16390	COG0686	Belongs to the AlaDH PNT family
DA787_16395	COG5634	Uncharacterized conserved protein (DUF2278)
DA787_16400	COG3251	PFAM MbtH domain protein
DA787_16405	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
DA787_16410	COG3433	isochorismatase activity
DA787_16410	COG1535	isochorismatase
DA787_16415	COG1021	2,3-dihydroxybenzoate-AMP ligase
DA787_16420	COG1169	isochorismate synthase
DA787_16425	COG1028	Short-chain dehydrogenase reductase Sdr
DA787_16430	COG2819	hydrolase of the alpha beta superfamily
DA787_16435	COG2041	Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. The catalytic subunit MsrP is non-stereospecific, being able to reduce both (R-) and (S-) diastereoisomers of methionine sulfoxide
DA787_16440	COG1268	BioY protein
DA787_16445	COG2056	Na+-H+ antiporter family
DA787_16450	COG0260	Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides
DA787_16455	COG1963	PFAM Acid phosphatase vanadium-dependent haloperoxidase related
DA787_16460	COG3584	3D domain protein
DA787_16475	COG1252	NADH dehydrogenase
DA787_16480	COG0492	ferredoxin-NADP+ reductase activity
DA787_16490	COG0516	GMP reductase activity
DA787_16495	COG2808	Putative FMN-binding domain
DA787_16500	COG0456	acetyltransferase
DA787_16505	COG0316	Belongs to the HesB IscA family
DA787_16510	COG0253	Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan
DA787_16515	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
DA787_16520	COG4844	belongs to the
DA787_16525	COG1252	NADH dehydrogenase
DA787_16530	COG4837	Protein of unknown function (DUF1462)
DA787_16535	COG0694	Involved in iron-sulfur cluster biogenesis. Binds a 4Fe- 4S cluster, can transfer this cluster to apoproteins, and thereby intervenes in the maturation of Fe S proteins. Could also act as a scaffold chaperone for damaged Fe S proteins
DA787_16540	COG4946	Tricorn protease homolog
DA787_16540	COG0823	Involved in the tonB-independent uptake of proteins
DA787_16540	COG1506	peptidase
DA787_16545	COG0083	homoserine kinase activity
DA787_16550	COG0498	Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine
DA787_16555	COG0460	homoserine dehydrogenase
DA787_16560	COG2334	A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response
DA787_16565	COG1267	Lipid phosphatase which dephosphorylates phosphatidylglycerophosphate (PGP) to phosphatidylglycerol (PG)
DA787_16570	COG0647	UMP catabolic process
DA787_16575	COG2445	Protein of unknown function DUF86
DA787_16580	COG4470	Protein conserved in bacteria
DA787_16590	COG0320	Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives
DA787_16595	COG0739	heme binding
DA787_16605	COG3377	Domain of unknown function (DUF1805)
DA787_16610	COG0737	Belongs to the 5'-nucleotidase family
DA787_16615	COG0730	response to heat
DA787_16620	COG1801	Protein of unknown function DUF72
DA787_16630	COG0044	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides
DA787_16635	COG2508	Transcriptional regulator
DA787_16640	COG2233	PERMEase
DA787_16645	COG2233	PERMEase
DA787_16650	COG3648	Uricase
DA787_16650	COG3195	allantoin biosynthetic process
DA787_16655	COG2351	hydroxyisourate hydrolase activity
DA787_16665	COG2080	2 iron, 2 sulfur cluster binding
DA787_16670	COG1529	Aldehyde oxidase and xanthine dehydrogenase
DA787_16675	COG1319	Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM
DA787_16680	COG2068	MobA-Related Protein
DA787_16685	COG1975	Xanthine and CO dehydrogenases maturation factor, XdhC CoxF family
DA787_16690	COG0075	2-aminoethylphosphonate-pyruvate transaminase activity
DA787_16695	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
DA787_16705	COG2356	endonuclease I
DA787_16710	COG3842	ATPase activity
DA787_16715	COG2188	Transcriptional regulator
DA787_16720	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
DA787_16725	COG0395	ABC-type sugar transport system, permease component
DA787_16730	COG1175	transmembrane transport
DA787_16735	COG1653	transport
DA787_16740	COG2222	sugar isomerase
DA787_16745	COG0322	excinuclease ABC activity
DA787_16750	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
DA787_16765	COG0346	lactoylglutathione lyase activity
DA787_16770	COG0640	Transcriptional regulator
DA787_16775	COG0719	Fe-S assembly protein
DA787_16780	COG0822	iron-sulfur transferase activity
DA787_16785	COG0520	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
DA787_16790	COG0719	Fe-S assembly protein
DA787_16795	COG0396	ATPase activity
DA787_16810	COG0599	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
DA787_16815	COG1464	Belongs to the NlpA lipoprotein family
DA787_16820	COG2011	ABC-type metal ion transport system permease component
DA787_16825	COG1135	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
DA787_16835	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
DA787_16840	COG1658	Required for correct processing of both the 5' and 3' ends of 5S rRNA precursor. Cleaves both sides of a double-stranded region yielding mature 5S rRNA in one step
DA787_16850	COG0509	glycine decarboxylation via glycine cleavage system
DA787_16855	COG1393	Belongs to the ArsC family
DA787_16860	COG1960	acyl-CoA dehydrogenase activity
DA787_16865	COG0183	Belongs to the thiolase family
DA787_16870	COG1250	3-hydroxyacyl-CoA dehydrogenase
DA787_16870	COG1024	Enoyl-CoA hydratase
DA787_16880	COG0506	proline dehydrogenase activity
DA787_16890	COG5577	PFAM Coat F domain
DA787_16895	COG1846	Transcriptional regulator
DA787_16900	COG0477	Major facilitator Superfamily
DA787_16905	COG1942	4-Oxalocrotonate Tautomerase
DA787_16915	COG0583	DNA-binding transcription factor activity
DA787_16925	COG1120	ATPase activity
DA787_16940	COG1028	Short-chain dehydrogenase reductase Sdr
DA787_16945	COG0783	Belongs to the Dps family
DA787_16950	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
DA787_16955	COG0745	RESPONSE REGULATOR receiver
DA787_16960	COG2205	protein histidine kinase activity
DA787_16960	COG2770	Histidine kinase
DA787_16970	COG1309	transcriptional regulator
DA787_16975	COG0114	fumarate hydratase activity
DA787_16985	COG0697	spore germination
DA787_16990	COG0814	amino acid
DA787_17000	COG2197	response regulator
DA787_17005	COG4585	Histidine kinase
DA787_17010	COG4758	membrane
DA787_17015	COG3595	metallopeptidase activity
DA787_17020	COG1842	Phage shock protein A
DA787_17025	COG4758	membrane
DA787_17030	COG2814	Major facilitator Superfamily
DA787_17035	COG2096	Adenosyltransferase
DA787_17040	COG1120	ATPase activity
DA787_17045	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
DA787_17050	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
DA787_17055	COG1028	Short-chain dehydrogenase reductase Sdr
DA787_17060	COG3386	PFAM SMP-30 Gluconolaconase
DA787_17065	COG2205	protein histidine kinase activity
DA787_17070	COG0745	RESPONSE REGULATOR receiver
DA787_17080	COG1191	sigma factor activity
DA787_17090	COG2140	Oxalate decarboxylase
DA787_17100	COG0577	efflux transmembrane transporter activity
DA787_17105	COG1136	(ABC) transporter
DA787_17110	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
DA787_17115	COG1120	ATPase activity
DA787_17120	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
DA787_17125	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
DA787_17130	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
DA787_17140	COG0531	amino acid
DA787_17155	COG1988	membrane-bound metal-dependent
DA787_17160	COG1368	sulfuric ester hydrolase activity
DA787_17165	COG1910	domain protein
DA787_17170	COG0725	ABC transporter, periplasmic molybdate-binding protein
DA787_17175	COG4149	molybdate abc transporter
DA787_17180	COG0656	L-ascorbic acid biosynthetic process
DA787_17190	COG0025	NhaP-type Na H and K H
DA787_17195	COG0155	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
DA787_17200	COG0369	Component of the sulfite reductase complex that catalyzes the 6-electron reduction of sulfite to sulfide. This is one of several activities required for the biosynthesis of L- cysteine from sulfate. The flavoprotein component catalyzes the electron flow from NADPH - FAD - FMN to the hemoprotein component
DA787_17205	COG3973	AAA domain
DA787_17210	COG2860	membrane
DA787_17215	COG1495	Required for disulfide bond formation in some periplasmic proteins. Acts by oxidizing the DsbA protein
DA787_17220	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
DA787_17225	COG2217	Heavy metal translocating P-type atpase
DA787_17230	COG2217	Heavy metal translocating P-type atpase
DA787_17235	COG2608	mercury ion transmembrane transporter activity
DA787_17240	COG1937	Protein conserved in bacteria
DA787_17245	COG0673	inositol 2-dehydrogenase activity
DA787_17250	COG1182	Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity
DA787_17255	COG1289	transmembrane transporter activity
DA787_17265	COG2076	Multidrug Resistance protein
DA787_17270	COG1309	transcriptional regulator
DA787_17275	COG1028	Short-chain dehydrogenase reductase Sdr
DA787_17285	COG0691	Required for rescue of stalled ribosomes mediated by trans-translation. Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes. tmRNA and SmpB together mimic tRNA shape, replacing the anticodon stem-loop with SmpB. tmRNA is encoded by the ssrA gene
DA787_17290	COG0557	exoribonuclease II activity
DA787_17295	COG1647	Serine aminopeptidase, S33
DA787_17300	COG1314	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
DA787_17305	COG0596	Alpha beta hydrolase
DA787_17310	COG1476	TRANSCRIPTIONal
DA787_17315	COG1396	sequence-specific DNA binding
DA787_17320	COG1396	sequence-specific DNA binding
DA787_17325	COG1733	regulation of RNA biosynthetic process
DA787_17330	COG0840	transmembrane signaling receptor activity
DA787_17335	COG1174	glycine betaine transport
DA787_17340	COG1732	Glycine betaine
DA787_17345	COG1174	glycine betaine transport
DA787_17350	COG1125	glycine betaine transport
DA787_17350	COG0517	IMP dehydrogenase activity
DA787_17355	COG1510	regulation of RNA biosynthetic process
DA787_17375	COG5658	integral membrane protein
DA787_17380	COG0640	Transcriptional regulator
DA787_17385	COG1174	glycine betaine transport
DA787_17390	COG1732	Glycine betaine
DA787_17395	COG1174	glycine betaine transport
DA787_17400	COG1125	glycine betaine transport
DA787_17400	COG0517	IMP dehydrogenase activity
DA787_17405	COG1510	regulation of RNA biosynthetic process
DA787_17410	COG2095	MarC family integral membrane protein
DA787_17420	COG3064	Membrane
DA787_17425	COG4640	response to antibiotic
DA787_17430	COG0456	acetyltransferase
DA787_17435	COG0148	phosphopyruvate hydratase activity
DA787_17440	COG0696	Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
DA787_17445	COG0149	triose-phosphate isomerase activity
DA787_17450	COG0126	phosphoglycerate kinase activity
DA787_17455	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
DA787_17460	COG2390	Transcriptional regulator
DA787_17465	COG2814	Major facilitator Superfamily
DA787_17470	COG1609	Transcriptional regulator
DA787_17475	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
DA787_17485	COG0583	DNA-binding transcription factor activity
DA787_17490	COG0697	spore germination
DA787_17495	COG1113	amino acid transport
DA787_17500	COG3858	chitin binding
DA787_17505	COG1556	Lactate utilization protein
DA787_17510	COG1139	Iron-sulfur cluster binding protein
DA787_17515	COG0247	lactate metabolic process
DA787_17520	COG2197	response regulator
DA787_17525	COG4585	Histidine kinase
DA787_17530	COG0842	Transport permease protein
DA787_17535	COG1131	(ABC) transporter
DA787_17540	COG0596	Alpha beta hydrolase
DA787_17545	COG2208	phosphoserine phosphatase activity
DA787_17550	COG3867	Arabinogalactan endo-beta-1,4-galactanase
DA787_17585	COG3833	ABC-type maltose transport systems, permease component
DA787_17590	COG1175	transmembrane transport
DA787_17595	COG2182	Extracellular solute-binding protein
DA787_17600	COG1609	Transcriptional regulator
DA787_17605	COG2186	Transcriptional regulator
DA787_17610	COG1620	l-lactate permease
DA787_17615	COG1508	bacterial-type RNA polymerase transcriptional activator activity, sequence-specific DNA binding
DA787_17625	COG5039	Polysaccharide pyruvyl transferase
DA787_17630	COG0399	UDP-4-amino-4-deoxy-L-arabinose aminotransferase
DA787_17635	COG0110	maltose O-acetyltransferase activity
DA787_17640	COG2148	undecaprenyl-phosphate glucose phosphotransferase activity
DA787_17645	COG2244	polysaccharide biosynthetic process
DA787_17650	COG1216	Glycosyl transferase, family 2
DA787_17655	COG5039	Polysaccharide pyruvyl transferase
DA787_17660	COG1216	Glycosyl transferase, family 2
DA787_17670	COG0438	transferase activity, transferring glycosyl groups
DA787_17675	COG1215	transferase activity, transferring glycosyl groups
DA787_17680	COG0438	transferase activity, transferring glycosyl groups
DA787_17685	COG1086	Polysaccharide biosynthesis protein
DA787_17690	COG0489	protein tyrosine kinase activity
DA787_17695	COG3944	biosynthesis protein
DA787_17700	COG1396	sequence-specific DNA binding
DA787_17705	COG2272	Belongs to the type-B carboxylesterase lipase family
DA787_17715	COG3479	Phenolic acid decarboxylase
DA787_17725	COG1794	racemase activity, acting on amino acids and derivatives
DA787_17730	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
DA787_17735	COG1621	beta-fructofuranosidase activity
DA787_17740	COG1621	beta-fructofuranosidase activity
DA787_17745	COG0531	amino acid
DA787_17750	COG1309	transcriptional regulator
DA787_17755	COG2076	Multidrug Resistance protein
DA787_17760	COG2076	Multidrug Resistance protein
DA787_17770	COG0277	FAD linked oxidase domain protein
DA787_17775	COG3621	Patatin-like phospholipase
DA787_17785	COG0740	serine-type endopeptidase activity
DA787_17790	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
DA787_17795	COG0366	Alpha amylase catalytic
DA787_17800	COG1554	hydrolase, family 65, central catalytic
DA787_17805	COG5521	maltodextrose utilization protein MalA
DA787_17810	COG3833	ABC-type maltose transport systems, permease component
DA787_17815	COG1175	transmembrane transport
DA787_17820	COG2182	Extracellular solute-binding protein
DA787_17825	COG0366	Alpha amylase catalytic
DA787_17830	COG1609	Transcriptional regulator
DA787_17835	COG1611	Belongs to the LOG family
DA787_17840	COG1694	Mazg nucleotide pyrophosphohydrolase
DA787_17845	COG0659	secondary active sulfate transmembrane transporter activity
DA787_17850	COG0288	reversible hydration of carbon dioxide
DA787_17860	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
DA787_17865	COG0577	efflux transmembrane transporter activity
DA787_17870	COG1136	(ABC) transporter
DA787_17875	COG5002	protein histidine kinase activity
DA787_17880	COG0745	RESPONSE REGULATOR receiver
DA787_17890	COG2162	N-hydroxyarylamine O-acetyltransferase activity
DA787_17895	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
DA787_17900	COG1481	regulation of sporulation
DA787_17905	COG0391	Required for morphogenesis under gluconeogenic growth conditions
DA787_17910	COG1660	Displays ATPase and GTPase activities
DA787_17915	COG1051	belongs to the nudix hydrolase family
DA787_17920	COG0492	ferredoxin-NADP+ reductase activity
DA787_17925	COG3883	PFAM NLP P60 protein
DA787_17925	COG0791	NLP P60 protein
DA787_17930	COG0457	Tetratricopeptide repeat
DA787_17935	COG1132	(ABC) transporter
DA787_17955	COG0139	Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP
DA787_17955	COG0140	phosphoribosyl-ATP diphosphatase activity
DA787_17960	COG0107	imidazoleglycerol-phosphate synthase activity
DA787_17965	COG0106	1-(5-phosphoribosyl)-5- 5-phosphoribosylamino)methylideneamino imidazole-4-carboxamide isomerase
DA787_17970	COG0118	IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR
DA787_17975	COG0131	Imidazoleglycerol-phosphate dehydratase
DA787_17980	COG0141	Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine
DA787_17985	COG0040	Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of hisG enzymatic activity
DA787_17990	COG3705	Required for the first step of histidine biosynthesis. May allow the feedback regulation of ATP phosphoribosyltransferase activity by histidine
DA787_17995	COG4990	cell redox homeostasis
DA787_18000	COG5297	Belongs to the glycosyl hydrolase family 6
DA787_18005	COG0110	maltose O-acetyltransferase activity
DA787_18010	COG0546	phosphoglycolate phosphatase activity
DA787_18015	COG0370	Transporter of a GTP-driven Fe(2 ) uptake system
DA787_18020	COG0682	Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins
DA787_18025	COG1493	Catalyzes the ATP- as well as the pyrophosphate- dependent phosphorylation of a specific serine residue in HPr, a phosphocarrier protein of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS). HprK P also catalyzes the pyrophosphate-producing, inorganic phosphate-dependent dephosphorylation (phosphorolysis) of seryl-phosphorylated HPr (P- Ser-HPr). The two antagonistic activities of HprK P are regulated by several intracellular metabolites, which change their concentration in response to the absence or presence of rapidly metabolisable carbon sources (glucose, fructose, etc.) in the growth medium. Therefore, by controlling the phosphorylation state of HPr, HPrK P is a sensor enzyme that plays a major role in the regulation of carbon metabolism and sugar transport it mediates carbon catabolite repression (CCR), and regulates PTS-catalyzed carbohydrate uptake and inducer exclusion
DA787_18030	COG1820	Belongs to the metallo-dependent hydrolases superfamily. NagA family
DA787_18035	COG0363	glucosamine-6-phosphate deaminase activity
DA787_18045	COG1409	Hydrolyzes cAMP to 5'-AMP. Plays an important regulatory role in modulating the intracellular concentration of cAMP, thereby influencing cAMP-dependent processes
DA787_18050	COG1846	Transcriptional regulator
DA787_18055	COG2124	cytochrome p450
DA787_18065	COG1846	Transcriptional regulator
DA787_18070	COG2814	Major facilitator Superfamily
DA787_18075	COG1950	PFAM Membrane protein of
DA787_18080	COG1983	PspC domain protein
DA787_18085	COG3595	metallopeptidase activity
DA787_18105	COG0178	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate
DA787_18110	COG0556	nucleotide-excision repair
DA787_18115	COG4897	Protein conserved in bacteria
DA787_18120	COG0574	Belongs to the PEP-utilizing enzyme family
DA787_18120	COG3848	Pyruvate phosphate dikinase
DA787_18125	COG1309	transcriptional regulator
DA787_18130	COG2814	Major facilitator Superfamily
DA787_18135	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
DA787_18145	COG0793	Belongs to the peptidase S41A family
DA787_18145	COG3409	Peptidoglycan-binding domain 1 protein
DA787_18150	COG2177	Part of the ABC transporter FtsEX involved in
DA787_18155	COG2884	Cell division ATP-binding protein ftsE
DA787_18160	COG2010	Cytochrome c
DA787_18165	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
DA787_18175	COG0653	protein targeting
DA787_18180	COG1544	Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
DA787_18195	COG1516	flagellar protein fliS
DA787_18200	COG1345	Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end
DA787_18205	COG1334	flagellar protein FlaG
DA787_18210	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
DA787_18215	COG1551	Could accelerate the degradation of some genes transcripts potentially through selective RNA binding
DA787_18220	COG1699	Binds to the C-terminal region of flagellin, which is implicated in polymerization, and participates in the assembly of the flagellum
DA787_18230	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
DA787_18235	COG4786	Flagellar basal body rod
DA787_18235	COG1256	bacterial-type flagellum assembly
DA787_18240	COG3418	PFAM FlgN family protein
DA787_18245	COG2747	anti-sigma28 factor FlgM
DA787_18255	COG1040	competence protein
DA787_18265	COG4098	Superfamily II DNA RNA helicase required for DNA uptake (late competence protein)
DA787_18270	COG1307	EDD domain protein, DegV family
DA787_18275	COG2197	response regulator
DA787_18280	COG4585	Histidine kinase
DA787_18285	COG1739	Uncharacterized protein family UPF0029
DA787_18290	COG1316	TRANSCRIPTIONal
DA787_18295	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
DA787_18300	COG0438	transferase activity, transferring glycosyl groups
DA787_18305	COG1215	transferase activity, transferring glycosyl groups
DA787_18310	COG3206	protein involved in exopolysaccharide biosynthesis
DA787_18315	COG3307	-O-antigen
DA787_18320	COG1004	Belongs to the UDP-glucose GDP-mannose dehydrogenase family
DA787_18325	COG0438	transferase activity, transferring glycosyl groups
DA787_18325	COG0297	glycogen (starch) synthase activity
DA787_18330	COG2244	polysaccharide biosynthetic process
DA787_18340	COG2247	cell wall binding repeat
DA787_18340	COG0860	N-Acetylmuramoyl-L-alanine amidase
DA787_18345	COG2385	sporulation resulting in formation of a cellular spore
DA787_18345	COG2247	cell wall binding repeat
DA787_18355	COG1316	TRANSCRIPTIONal
DA787_18360	COG0381	UDP-N-acetylglucosamine 2-epimerase activity
DA787_18365	COG1210	Utp--glucose-1-phosphate uridylyltransferase
DA787_18375	COG1887	Glycosyl glycerophosphate transferases involved in teichoic acid biosynthesis TagF TagB EpsJ RodC
DA787_18375	COG1215	transferase activity, transferring glycosyl groups
DA787_18380	COG0463	Glycosyl transferase, family 2
DA787_18390	COG1887	Glycosyl glycerophosphate transferases involved in teichoic acid biosynthesis TagF TagB EpsJ RodC
DA787_18400	COG1210	Utp--glucose-1-phosphate uridylyltransferase
DA787_18405	COG1134	teichoic acid transport
DA787_18410	COG1682	transport, permease protein
DA787_18415	COG1887	Glycosyl glycerophosphate transferases involved in teichoic acid biosynthesis TagF TagB EpsJ RodC
DA787_18420	COG0438	transferase activity, transferring glycosyl groups
DA787_18425	COG0615	ADP-L-glycero-beta-D-manno-heptose biosynthetic process
DA787_18430	COG1922	lipopolysaccharide N-acetylmannosaminouronosyltransferase activity
DA787_18435	COG1887	Glycosyl glycerophosphate transferases involved in teichoic acid biosynthesis TagF TagB EpsJ RodC
DA787_18445	COG4193	domain, Protein
DA787_18450	COG1482	cell wall glycoprotein biosynthetic process
DA787_18455	COG0697	spore germination
DA787_18460	COG0814	amino acid
DA787_18470	COG2814	Major facilitator Superfamily
DA787_18475	COG1316	TRANSCRIPTIONal
DA787_18480	COG0561	phosphatase activity
DA787_18485	COG0791	NLP P60 protein
DA787_18495	COG2843	Capsule synthesis protein
DA787_18505	COG0771	Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA)
DA787_18515	COG1609	Transcriptional regulator
DA787_18520	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
DA787_18525	COG1869	D-ribose catabolic process
DA787_18530	COG1129	ABC transporter
DA787_18535	COG1172	Belongs to the binding-protein-dependent transport system permease family
DA787_18540	COG1879	ABC-type sugar transport system periplasmic component
DA787_18545	COG3103	Sh3 type 3 domain protein
DA787_18555	COG2249	NAD(P)H dehydrogenase (quinone) activity
DA787_18560	COG3527	Alpha-acetolactate decarboxylase
DA787_18565	COG0028	Belongs to the TPP enzyme family
DA787_18570	COG0583	DNA-binding transcription factor activity
DA787_18575	COG1055	Involved in arsenical resistance. Thought to form the channel of an arsenite pump
DA787_18590	COG5337	Spore coat protein CotH
DA787_18600	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
DA787_18610	COG0405	Gamma-glutamyltransferase
DA787_18615	COG1522	sequence-specific DNA binding
DA787_18620	COG2059	Chromate
DA787_18625	COG2059	Chromate
DA787_18635	COG0655	NAD(P)H dehydrogenase (quinone) activity
DA787_18640	COG0583	DNA-binding transcription factor activity
DA787_18645	COG1515	deoxyribonuclease V activity
DA787_18650	COG2849	repeat protein
DA787_18655	COG5444	nuclease activity
DA787_18675	COG3878	Protein conserved in bacteria
DA787_18680	COG1004	Belongs to the UDP-glucose GDP-mannose dehydrogenase family
DA787_18685	COG4464	protein tyrosine phosphatase activity
DA787_18690	COG0489	protein tyrosine kinase activity
DA787_18695	COG3944	biosynthesis protein
DA787_18705	COG4715	Zinc finger, swim domain protein
DA787_18710	COG0553	Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair
DA787_18720	COG0561	phosphatase activity
DA787_18725	COG1349	DNA-binding transcription factor activity
DA787_18730	COG0629	single-stranded DNA binding
DA787_18745	COG3764	Sortase (surface protein transpeptidase)
DA787_18750	COG2972	Histidine kinase
DA787_18750	COG0745	RESPONSE REGULATOR receiver
DA787_18755	COG1970	mechanosensitive ion channel activity
DA787_18760	COG0764	3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity
DA787_18765	COG0457	Tetratricopeptide repeat
DA787_18770	COG4786	Flagellar basal body rod
DA787_18775	COG4786	Flagellar basal body rod
DA787_18780	COG1077	Cell shape determining protein MreB Mrl
DA787_18785	COG1609	Transcriptional regulator
DA787_18795	COG1846	Transcriptional regulator
DA787_18800	COG2814	Major facilitator Superfamily
DA787_18805	COG3420	alginic acid biosynthetic process
DA787_18810	COG1953	Uracil, thiamine, allantoin
DA787_18815	COG0477	Major facilitator Superfamily
DA787_18820	COG1335	isochorismatase
DA787_18830	COG0004	ammonium transporteR
DA787_18835	COG0347	Belongs to the P(II) protein family
DA787_18840	COG0671	phosphoesterase, PA-phosphatase related
DA787_18850	COG0739	heme binding
DA787_18855	COG1247	-acetyltransferase
DA787_18875	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
DA787_18880	COG0789	Transcriptional regulator
DA787_18890	COG2910	NAD(P)H-binding
DA787_18895	COG1959	2 iron, 2 sulfur cluster binding
DA787_18900	COG0804	urea catabolic process
DA787_18905	COG0832	Belongs to the urease beta subunit family
DA787_18910	COG0831	urea catabolic process
DA787_18925	COG3237	CsbD-like
DA787_18930	COG1994	Peptidase M50
DA787_18935	COG0457	Tetratricopeptide repeat
DA787_18945	COG2896	Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate
DA787_18950	COG1526	Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH
DA787_18960	COG2304	oxidoreductase activity
DA787_18970	COG2304	oxidoreductase activity
DA787_18975	COG2385	sporulation resulting in formation of a cellular spore
DA787_18980	COG0766	Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
DA787_18990	COG4836	Membrane
DA787_19000	COG0355	proton-transporting ATP synthase activity, rotational mechanism
DA787_19005	COG0055	Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits
DA787_19010	COG0224	Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex
DA787_19015	COG0056	Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit
DA787_19020	COG0712	F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
DA787_19025	COG0711	Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)
DA787_19030	COG0636	F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
DA787_19035	COG0356	it plays a direct role in the translocation of protons across the membrane
DA787_19045	COG0035	Catalyzes the conversion of uracil and 5-phospho-alpha- D-ribose 1-diphosphate (PRPP) to UMP and diphosphate
DA787_19050	COG0112	Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism
DA787_19055	COG4475	Protein of unknown function (DUF436)
DA787_19060	COG0698	ribose 5-phosphate isomerase
DA787_19065	COG0394	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
DA787_19070	COG1971	Probably functions as a manganese efflux pump
DA787_19075	COG0009	L-threonylcarbamoyladenylate synthase
DA787_19080	COG1246	Belongs to the acetyltransferase family. ArgA subfamily
DA787_19100	COG2890	protein-(glutamine-N5) methyltransferase activity
DA787_19105	COG0216	Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA
DA787_19110	COG0346	lactoylglutathione lyase activity
DA787_19115	COG0789	Transcriptional regulator
DA787_19120	COG0679	Auxin Efflux Carrier
DA787_19125	COG0281	malic enzyme
DA787_19130	COG1435	thymidine kinase activity
DA787_19135	COG0254	rRNA binding
DA787_19140	COG1158	Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template
DA787_19150	COG1494	fructose-1,6-bisphosphatase
DA787_19155	COG0766	Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
DA787_19160	COG0176	Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
DA787_19165	COG0191	fructose-bisphosphate aldolase activity
DA787_19170	COG2204	response regulator
DA787_19175	COG4821	SIS domain
DA787_19180	COG0504	CTP synthase activity
DA787_19185	COG3343	RNA polymerase activity
DA787_19190	COG1960	acyl-CoA dehydrogenase activity
DA787_19195	COG0247	lactate metabolic process
DA787_19195	COG2181	nitrate reductase activity
DA787_19200	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
DA787_19205	COG4294	response to UV
DA787_19215	COG0262	Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis
DA787_19220	COG1132	(ABC) transporter
DA787_19225	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
DA787_19235	COG2181	nitrate reductase activity
DA787_19240	COG2180	nitrate reductase molybdenum cofactor assembly chaperone
DA787_19245	COG1140	nitrate reductase beta subunit
DA787_19250	COG5013	Belongs to the prokaryotic molybdopterin-containing oxidoreductase family
DA787_19255	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
DA787_19265	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
DA787_19270	COG2223	nitrite transmembrane transporter activity
DA787_19275	COG0018	arginyl-trna synthetase
DA787_19280	COG4506	Protein conserved in bacteria
DA787_19295	COG0535	radical SAM domain protein
DA787_19305	COG1131	(ABC) transporter
DA787_19310	COG0474	ATPase, P-type transporting, HAD superfamily, subfamily IC
DA787_19315	COG0612	Peptidase, M16
DA787_19320	COG0612	Peptidase, M16
DA787_19330	COG3391	amine dehydrogenase activity
DA787_19335	COG3391	amine dehydrogenase activity
DA787_19345	COG0457	Tetratricopeptide repeat
DA787_19355	COG2606	Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
DA787_19360	COG0010	Belongs to the arginase family
DA787_19365	COG0421	Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine
DA787_19370	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
DA787_19385	COG1994	Peptidase M50
DA787_19390	COG1942	4-Oxalocrotonate Tautomerase
DA787_19395	COG1846	Transcriptional regulator
DA787_19400	COG0441	Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
DA787_19410	COG0477	Major facilitator Superfamily
DA787_19415	COG1959	2 iron, 2 sulfur cluster binding
DA787_19420	COG3465	dGTPase activity
DA787_19425	COG1078	dGTPase activity
DA787_19430	COG4844	belongs to the
DA787_19440	COG0697	spore germination
DA787_19445	COG0095	Lipoate-protein ligase
DA787_19450	COG0583	DNA-binding transcription factor activity
DA787_19455	COG0280	phosphate acetyltransferase
DA787_19465	COG1028	Short-chain dehydrogenase reductase Sdr
DA787_19470	COG0436	Aminotransferase
DA787_19475	COG2814	Major facilitator Superfamily
DA787_19480	COG0151	Belongs to the GarS family
DA787_19485	COG1028	Short-chain dehydrogenase reductase Sdr
DA787_19490	COG1917	Cupin 2, conserved barrel domain protein
DA787_19495	COG0077	Prephenate dehydratase
DA787_19500	COG2814	Major facilitator Superfamily
DA787_19505	COG0833	amino acid
DA787_19510	COG4187	Peptidase family M20/M25/M40
DA787_19515	COG1012	belongs to the aldehyde dehydrogenase family
DA787_19520	COG0334	Belongs to the Glu Leu Phe Val dehydrogenases family
DA787_19530	COG1898	dTDP-4-dehydrorhamnose 3,5-epimerase activity
DA787_19535	COG1091	dTDP-4-dehydrorhamnose reductase activity
DA787_19540	COG1088	dTDP-glucose 4,6-dehydratase activity
DA787_19545	COG1209	Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis
DA787_19550	COG3980	spore coat polysaccharide biosynthesis protein
DA787_19555	COG1861	Spore coat polysaccharide biosynthesis protein F CMP-KDO synthetase
DA787_19560	COG2089	acid synthase
DA787_19565	COG0456	acetyltransferase
DA787_19570	COG0399	UDP-4-amino-4-deoxy-L-arabinose aminotransferase
DA787_19575	COG1887	Glycosyl glycerophosphate transferases involved in teichoic acid biosynthesis TagF TagB EpsJ RodC
DA787_19580	COG0463	Glycosyl transferase, family 2
DA787_19595	COG2363	Small membrane protein
DA787_19600	COG2233	PERMEase
DA787_19610	COG1012	belongs to the aldehyde dehydrogenase family
DA787_19615	COG0692	Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine
DA787_19620	COG1216	Glycosyl transferase, family 2
DA787_19635	COG1695	Transcriptional regulator
DA787_19640	COG0351	phosphomethylpyrimidine kinase
DA787_19650	COG1621	beta-fructofuranosidase activity
DA787_19655	COG1263	PTS System
DA787_19655	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
DA787_19660	COG2116	formate transmembrane transporter activity
DA787_19665	COG3711	transcriptional antiterminator
DA787_19675	COG1404	Belongs to the peptidase S8 family
DA787_19680	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
DA787_19685	COG0778	Nitroreductase
DA787_19690	COG0772	Belongs to the SEDS family
DA787_19700	COG3125	oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor
DA787_19705	COG1845	cytochrome c oxidase, subunit III
DA787_19710	COG0843	Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B
DA787_19715	COG1622	oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor
DA787_19720	COG2261	transglycosylase associated protein
DA787_19725	COG4468	UDPglucose--hexose-1-phosphate uridylyltransferase
DA787_19730	COG0153	Catalyzes the transfer of the gamma-phosphate of ATP to D-galactose to form alpha-D-galactose-1-phosphate (Gal-1-P)
DA787_19735	COG2246	polysaccharide biosynthetic process
DA787_19740	COG1309	transcriptional regulator
DA787_19750	COG3162	membrane
DA787_19755	COG4147	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
DA787_19760	COG2761	dithiol-disulfide isomerase involved in polyketide biosynthesis
DA787_19765	COG2837	iron assimilation
DA787_19770	COG2822	iron ion transport
DA787_19775	COG0672	)-iron permease
DA787_19780	COG0352	thiamine-phosphate diphosphorylase activity
DA787_19785	COG2145	Catalyzes the phosphorylation of the hydroxyl group of 4-methyl-5-beta-hydroxyethylthiazole (THZ)
DA787_19790	COG0583	DNA-binding transcription factor activity
DA787_19795	COG1380	Effector of murein hydrolase LrgA
DA787_19800	COG1346	cytolysis
DA787_19805	COG2814	Major facilitator Superfamily
DA787_19810	COG4895	conserved protein (DUF2196)
DA787_19815	COG1092	Specifically methylates the guanine in position 2445 (m2G2445) and the guanine in position 2069 (m7G2069) of 23S rRNA
DA787_19820	COG0346	lactoylglutathione lyase activity
DA787_19830	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
DA787_19835	COG1404	Belongs to the peptidase S8 family
DA787_19840	COG1263	PTS System
DA787_19840	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
DA787_19845	COG3711	transcriptional antiterminator
DA787_19850	COG1442	glycosyl transferase family 8
DA787_19855	COG5522	Integral membrane protein (intg_mem_TP0381)
DA787_19860	COG1846	Transcriptional regulator
DA787_19865	COG0162	Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
DA787_19870	COG2234	aminopeptidase activity
DA787_19875	COG2357	RelA SpoT domain protein
DA787_19880	COG1575	Belongs to the MenA family. Type 1 subfamily
DA787_19900	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
DA787_19905	COG1696	Membrane protein involved in D-alanine export
DA787_19910	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
DA787_19915	COG3966	Protein involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein)
DA787_19920	COG3967	Belongs to the short-chain dehydrogenases reductases (SDR) family
DA787_19925	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
DA787_19930	COG1486	melibiose metabolic process
DA787_19935	COG1447	Phosphotransferase system cellobiose-specific component IIA
DA787_19940	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
DA787_19945	COG1440	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
DA787_19950	COG3711	transcriptional antiterminator
DA787_19950	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
DA787_19960	COG2094	Belongs to the DNA glycosylase MPG family
DA787_19965	COG0753	catalase activity
DA787_19970	COG2814	Major facilitator Superfamily
DA787_19975	COG1277	ABC-type transport system involved in multi-copper enzyme maturation permease component
DA787_19980	COG1131	(ABC) transporter
DA787_20000	COG1595	DNA-templated transcription, initiation
DA787_20005	COG1457	Belongs to the purine-cytosine permease (2.A.39) family
DA787_20010	COG0063	ADP-dependent NAD(P)H-hydrate dehydratase activity
DA787_20015	COG4987	ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease ATP-binding protein CydC
DA787_20020	COG4988	ABC transporter
DA787_20025	COG1294	oxidase, subunit
DA787_20030	COG1271	oxidase subunit
DA787_20035	COG3493	citrate carrier protein
DA787_20055	COG0726	polysaccharide deacetylase
DA787_20060	COG3842	ATPase activity
DA787_20065	COG2508	Transcriptional regulator
DA787_20070	COG1012	belongs to the aldehyde dehydrogenase family
DA787_20075	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
DA787_20090	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
DA787_20095	COG1881	PFAM PEBP family protein
DA787_20100	COG0583	DNA-binding transcription factor activity
DA787_20110	COG4585	Histidine kinase
DA787_20115	COG2197	response regulator
DA787_20120	COG2195	Cleaves the N-terminal amino acid of tripeptides
DA787_20130	COG4894	glucomannan catabolic process
DA787_20135	COG0620	Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation
DA787_20140	COG0620	Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation
DA787_20145	COG1028	Short-chain dehydrogenase reductase Sdr
DA787_20150	COG2057	Acyl CoA acetate 3-ketoacid CoA transferase beta subunit
DA787_20155	COG1788	Acyl CoA acetate 3-ketoacid CoA transferase, alpha subunit
DA787_20160	COG2610	gluconate transmembrane transporter activity
DA787_20165	COG0500	methyltransferase
DA787_20170	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
DA787_20185	COG0693	protein deglycase activity
DA787_20185	COG0753	catalase activity
DA787_20190	COG2851	Citrate transporter
DA787_20195	COG2273	Hydrolase Family 16
DA787_20200	COG3711	transcriptional antiterminator
DA787_20210	COG2270	Major facilitator Superfamily
DA787_20215	COG0513	Belongs to the DEAD box helicase family
DA787_20220	COG2755	lipolytic protein G-D-S-L family
DA787_20220	COG3401	FG-GAP repeat protein
DA787_20275	COG3209	COG3209 Rhs family protein
DA787_20280	COG0697	spore germination
DA787_20285	COG0589	response to stress
DA787_20290	COG2723	6-phospho-beta-galactosidase activity
DA787_20295	COG1263	PTS System
DA787_20295	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
DA787_20295	COG2190	(PTS) system
DA787_20310	COG5444	nuclease activity
DA787_20325	COG3507	Belongs to the glycosyl hydrolase 43 family
DA787_20340	COG2986	histidine ammonia-lyase
DA787_20345	COG2987	Catalyzes the conversion of urocanate to 4-imidazolone- 5-propionate
DA787_20350	COG1228	amidohydrolase
DA787_20355	COG0010	Belongs to the arginase family
DA787_20360	COG0833	amino acid
DA787_20365	COG0213	The enzymes which catalyze the reversible phosphorolysis of pyrimidine nucleosides are involved in the degradation of these compounds and in their utilization as carbon and energy sources, or in the rescue of pyrimidine bases for nucleotide synthesis
DA787_20370	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
DA787_20375	COG0274	Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy- D-ribose 5-phosphate
DA787_20380	COG2390	Transcriptional regulator
DA787_20390	COG3192	ethanolamine utilization protein
DA787_20395	COG2079	MmgE PrpD family protein
DA787_20405	COG1126	abc transporter atp-binding protein
DA787_20410	COG0765	amino acid transport
DA787_20415	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
DA787_20435	COG3049	Linear amide C-N hydrolases, choloylglycine hydrolase family
DA787_20440	COG0561	phosphatase activity
DA787_20470	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
DA787_20475	COG5294	Protein conserved in bacteria
DA787_20480	COG0577	efflux transmembrane transporter activity
DA787_20485	COG1136	(ABC) transporter
DA787_20490	COG2205	protein histidine kinase activity
DA787_20495	COG0745	RESPONSE REGULATOR receiver
DA787_20500	COG0191	fructose-bisphosphate aldolase activity
DA787_20505	COG1082	Xylose isomerase domain protein TIM barrel
DA787_20510	COG1082	Xylose isomerase domain protein TIM barrel
DA787_20515	COG0673	inositol 2-dehydrogenase activity
DA787_20520	COG2814	Major facilitator Superfamily
DA787_20525	COG1082	Xylose isomerase domain protein TIM barrel
DA787_20530	COG3962	Belongs to the TPP enzyme family
DA787_20535	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
DA787_20540	COG3718	enzyme involved in inositol metabolism
DA787_20545	COG1012	belongs to the aldehyde dehydrogenase family
DA787_20550	COG1349	DNA-binding transcription factor activity
DA787_20555	COG0667	Aldo Keto reductase
DA787_20570	COG2814	Major facilitator Superfamily
DA787_20575	COG0326	Molecular chaperone. Has ATPase activity
DA787_20585	COG1028	Short-chain dehydrogenase reductase Sdr
DA787_20590	COG1309	transcriptional regulator
DA787_20595	COG1012	belongs to the aldehyde dehydrogenase family
DA787_20600	COG0456	acetyltransferase
DA787_20605	COG2850	peptidyl-arginine hydroxylation
DA787_20610	COG2226	methyltransferase
DA787_20625	COG0367	asparagine synthase
DA787_20630	COG2814	Major facilitator Superfamily
DA787_20635	COG1520	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
DA787_20645	COG1714	RDD family
DA787_20650	COG2311	Membrane
DA787_20655	COG1917	Cupin 2, conserved barrel domain protein
DA787_20660	COG1309	transcriptional regulator
DA787_20665	COG1028	Short-chain dehydrogenase reductase Sdr
DA787_20670	COG1846	Transcriptional regulator
DA787_20675	COG1380	Effector of murein hydrolase LrgA
DA787_20680	COG1346	cytolysis
DA787_20685	COG5039	Polysaccharide pyruvyl transferase
DA787_20690	COG1929	Belongs to the glycerate kinase type-1 family
DA787_20695	COG1802	Transcriptional regulator
DA787_20700	COG1070	Carbohydrate kinase
DA787_20705	COG2610	gluconate transmembrane transporter activity
DA787_20710	COG0362	Catalyzes the oxidative decarboxylation of 6- phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH
DA787_20715	COG0450	alkyl hydroperoxide reductase
DA787_20720	COG3634	alkyl hydroperoxide reductase activity
DA787_20725	COG2723	6-phospho-beta-galactosidase activity
DA787_20730	COG2190	(PTS) system
DA787_20735	COG2190	(PTS) system
DA787_20735	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
DA787_20735	COG1263	PTS System
DA787_20740	COG2188	Transcriptional regulator
DA787_20755	COG1131	(ABC) transporter
DA787_20760	COG1994	Peptidase M50
DA787_20765	COG0535	radical SAM domain protein
DA787_20775	COG3855	fructose 1,6-bisphosphate 1-phosphatase activity
DA787_20780	COG5293	efflux transmembrane transporter activity
DA787_20790	COG1409	Hydrolyzes cAMP to 5'-AMP. Plays an important regulatory role in modulating the intracellular concentration of cAMP, thereby influencing cAMP-dependent processes
DA787_20795	COG1576	Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA
DA787_20810	COG1063	alcohol dehydrogenase
DA787_20830	COG3863	Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family
DA787_20835	COG0456	acetyltransferase
DA787_20840	COG0457	Tetratricopeptide repeat
DA787_20850	COG0010	Belongs to the arginase family
DA787_20855	COG0833	amino acid
DA787_20860	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
DA787_20865	COG3829	transcription factor binding
DA787_20885	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
DA787_20890	COG1235	May be involved in the transport of PQQ or its precursor to the periplasm
DA787_20895	COG4853	Protein conserved in bacteria
DA787_20900	COG4863	YycH protein
DA787_20905	COG5002	protein histidine kinase activity
DA787_20910	COG0745	RESPONSE REGULATOR receiver
DA787_20940	COG0346	lactoylglutathione lyase activity
DA787_20945	COG0305	Participates in initiation and elongation during chromosome replication
DA787_20960	COG3093	addiction module antidote protein HigA
DA787_20965	COG2807	transmembrane transport
DA787_20970	COG1807	4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family
DA787_20975	COG0359	binds to the 23S rRNA
DA787_20980	COG3887	signaling protein consisting of a modified GGDEF domain and a DHH domain
DA787_20985	COG4241	membrane
DA787_20995	COG5577	PFAM Coat F domain
DA787_21000	COG1733	regulation of RNA biosynthetic process
DA787_21005	COG1227	inorganic diphosphatase activity
DA787_21020	COG2271	Major facilitator Superfamily
DA787_21055	COG1131	(ABC) transporter
DA787_21070	COG4319	ketosteroid isomerase
DA787_21075	COG1357	PFAM Pentapeptide repeats (8 copies)
DA787_21080	COG2814	Major facilitator Superfamily
DA787_21085	COG0583	DNA-binding transcription factor activity
DA787_21090	COG2153	protein acetylation
DA787_21105	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
DA787_21110	COG1846	Transcriptional regulator
DA787_21115	COG2153	protein acetylation
DA787_21120	COG2364	Membrane
DA787_21125	COG0456	acetyltransferase
DA787_21130	COG2315	Protein conserved in bacteria
DA787_21135	COG0262	Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis
DA787_21145	COG2814	Major facilitator Superfamily
DA787_21155	COG1331	Highly conserved protein containing a thioredoxin domain
DA787_21160	COG0789	Transcriptional regulator
DA787_21165	COG0697	spore germination
DA787_21170	COG1331	Highly conserved protein containing a thioredoxin domain
DA787_21175	COG1266	CAAX protease self-immunity
DA787_21180	COG2814	Major facilitator Superfamily
DA787_21180	COG0477	Major facilitator Superfamily
DA787_21185	COG0110	maltose O-acetyltransferase activity
DA787_21190	COG0346	lactoylglutathione lyase activity
DA787_21195	COG1609	Transcriptional regulator
DA787_21200	COG0708	Exodeoxyribonuclease III
DA787_21205	COG0238	Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit
DA787_21210	COG0629	single-stranded DNA binding
DA787_21215	COG0360	Binds together with S18 to 16S ribosomal RNA
DA787_21220	COG0012	GTP binding
DA787_21225	COG0243	molybdopterin cofactor binding
DA787_21230	COG4481	Protein conserved in bacteria
DA787_21235	COG3949	Membrane
DA787_21245	COG1475	DNA binding
DA787_21250	COG1192	Involved in chromosome partitioning
DA787_21260	COG1475	DNA binding
DA787_21265	COG0357	Ribosomal RNA small subunit methyltransferase G
DA787_21270	COG0445	tRNA wobble uridine modification
DA787_21275	COG0486	Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34
DA787_21280	COG1847	R3H domain protein
DA787_21285	COG0706	membrane insertase activity
DA787_21290	COG0594	ribonuclease P activity
DA787_21295	COG0230	Belongs to the bacterial ribosomal protein bL34 family