locus-tag class description NDK36_00005 PF00308 Bacterial dnaA protein NDK36_00005 PF08299 Bacterial dnaA protein helix-turn-helix NDK36_00005 PF11638 DnaA N-terminal domain NDK36_00010 PF00712 DNA polymerase III beta subunit, N-terminal domain NDK36_00010 PF02767 DNA polymerase III beta subunit, central domain NDK36_00010 PF02768 DNA polymerase III beta subunit, C-terminal domain NDK36_00020 PF02463 RecF/RecN/SMC N terminal domain NDK36_00025 PF04025 Domain of unknown function (DUF370) NDK36_00030 PF00204 DNA gyrase B NDK36_00030 PF00986 DNA gyrase B subunit, carboxyl terminus NDK36_00030 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NDK36_00030 PF01751 Toprim domain NDK36_00035 PF03989 DNA gyrase C-terminal domain, beta-propeller NDK36_00035 PF00521 DNA gyrase/topoisomerase IV, subunit A NDK36_00065 PF14175 YaaC-like Protein NDK36_00070 PF00478 IMP dehydrogenase / GMP reductase domain NDK36_00070 PF00571 CBS domain NDK36_00075 PF07943 Penicillin-binding protein 5, C-terminal domain NDK36_00075 PF00768 D-alanyl-D-alanine carboxypeptidase NDK36_00080 PF01680 SOR/SNZ family NDK36_00085 PF01174 SNO glutamine amidotransferase family NDK36_00090 PF02403 Seryl-tRNA synthetase N-terminal domain NDK36_00090 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) NDK36_00100 PF01712 Deoxynucleoside kinase NDK36_00105 PF01712 Deoxynucleoside kinase NDK36_00110 PF00704 Glycosyl hydrolases family 18 NDK36_00110 PF01476 LysM domain NDK36_00115 PF00857 Isochorismatase family NDK36_00120 PF14437 MafB19-like deaminase NDK36_00130 PF12169 DNA polymerase III subunits gamma and tau domain III NDK36_00135 PF02575 YbaB/EbfC DNA-binding family NDK36_00140 PF13662 Toprim domain NDK36_00140 PF02132 RecR protein NDK36_00145 PF10704 Protein of unknown function (DUF2508) NDK36_00150 PF07441 SigmaK-factor processing regulatory protein BofA NDK36_00180 PF10764 Inhibitor of sigma-G Gin NDK36_00185 PF10112 5-bromo-4-chloroindolyl phosphate hydrolysis protein NDK36_00190 PF05816 Toxic anion resistance protein (TelA) NDK36_00195 PF01276 Orn/Lys/Arg decarboxylase, major domain NDK36_00195 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain NDK36_00200 PF02223 Thymidylate kinase NDK36_00205 PF06153 Cyclic-di-AMP receptor NDK36_00210 PF03885 Protein of unknown function (DUF327) NDK36_00215 PF09115 DNA polymerase III, delta subunit, C terminal NDK36_00220 PF04468 PSP1 C-terminal conserved region NDK36_00225 PF06156 Initiation control protein YabA NDK36_00230 PF05175 Methyltransferase small domain NDK36_00235 PF01541 GIY-YIG catalytic domain NDK36_00240 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases NDK36_00245 PF18277 AbrB C-terminal domain NDK36_00245 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin NDK36_00250 PF08264 Anticodon-binding domain of tRNA NDK36_00250 PF09334 tRNA synthetases class I (M) NDK36_00250 PF01588 Putative tRNA binding domain NDK36_00255 PF01026 TatD related DNase NDK36_00260 PF06725 3D domain NDK36_00260 PF03990 G5-linked-Ubiquitin-like domain NDK36_00260 PF07501 G5 domain NDK36_00265 PF13331 Domain of unknown function (DUF4093) NDK36_00265 PF13662 Toprim domain NDK36_00270 PF00398 Ribosomal RNA adenine dimethylase NDK36_00275 PF05582 YabG peptidase U57 NDK36_00280 PF06257 Biofilm formation stimulator VEG NDK36_00285 PF00269 Small, acid-soluble spore proteins, alpha/beta type NDK36_00290 PF00288 GHMP kinases N terminal domain NDK36_00290 PF08544 GHMP kinases C terminal NDK36_00295 PF00156 Phosphoribosyl transferase domain NDK36_00295 PF09182 Bacterial purine repressor, N-terminal NDK36_00300 PF01042 Endoribonuclease L-PSP NDK36_00305 PF04026 SpoVG NDK36_00310 PF00132 Bacterial transferase hexapeptide (six repeats) NDK36_00310 PF00483 Nucleotidyl transferase NDK36_00315 PF14572 Phosphoribosyl synthetase-associated domain NDK36_00315 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase NDK36_00320 PF01386 Ribosomal L25p family NDK36_00320 PF14693 Ribosomal protein TL5, C-terminal domain NDK36_00325 PF01195 Peptidyl-tRNA hydrolase NDK36_00330 PF10955 Protein of unknown function (DUF2757) NDK36_00335 PF17757 UvrB interaction domain NDK36_00335 PF00271 Helicase conserved C-terminal domain NDK36_00335 PF03461 TRCF domain NDK36_00335 PF02559 CarD-like/TRCF domain NDK36_00335 PF00270 DEAD/DEAH box helicase NDK36_00340 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin NDK36_00340 PF15714 Stage V sporulation protein T C-terminal, transcription factor NDK36_00345 PF01943 Polysaccharide biosynthesis protein NDK36_00345 PF14667 Polysaccharide biosynthesis C-terminal domain NDK36_00350 PF03819 MazG nucleotide pyrophosphohydrolase domain NDK36_00350 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases NDK36_00355 PF01479 S4 domain NDK36_00360 PF07873 YabP family NDK36_00365 PF09578 Spore cortex protein YabQ (Spore_YabQ) NDK36_00370 PF04977 Septum formation initiator NDK36_00375 PF00575 S1 RNA binding domain NDK36_00390 PF07228 Stage II sporulation protein E (SpoIIE) NDK36_00395 PF00092 von Willebrand factor type A domain NDK36_00400 PF00069 Protein kinase domain NDK36_00405 PF11734 TilS substrate C-terminal domain NDK36_00405 PF01171 PP-loop family NDK36_00405 PF09179 TilS substrate binding domain NDK36_00410 PF00156 Phosphoribosyl transferase domain NDK36_00415 PF00004 ATPase family associated with various cellular activities (AAA) NDK36_00415 PF17862 AAA+ lid domain NDK36_00415 PF06480 FtsH Extracellular NDK36_00415 PF01434 Peptidase family M41 NDK36_00420 PF03309 Type III pantothenate kinase NDK36_00425 PF01430 Hsp33 protein NDK36_00430 PF13145 PPIC-type PPIASE domain NDK36_00435 PF00291 Pyridoxal-phosphate dependent enzyme NDK36_00440 PF04715 Anthranilate synthase component I, N terminal region NDK36_00440 PF00425 chorismate binding enzyme NDK36_00445 PF00117 Glutamine amidotransferase class-I NDK36_00450 PF01063 Amino-transferase class IV NDK36_00455 PF00809 Pterin binding enzyme NDK36_00460 PF02152 Dihydroneopterin aldolase NDK36_00465 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) NDK36_00470 PF01381 Helix-turn-helix NDK36_00475 PF01207 Dihydrouridine synthase (Dus) NDK36_00480 PF00152 tRNA synthetases class II (D, K and N) NDK36_00480 PF01336 OB-fold nucleic acid binding domain NDK36_00560 PF05848 CtsR N-terminal HTH domain NDK36_00560 PF17727 CtsR C-terminal dimerization domain NDK36_00565 PF02151 UvrB/uvrC motif NDK36_00570 PF00217 ATP:guanido phosphotransferase, C-terminal catalytic domain NDK36_00575 PF02861 Clp amino terminal domain, pathogenicity island component NDK36_00575 PF17871 AAA lid domain NDK36_00575 PF10431 C-terminal, D2-small domain, of ClpB protein NDK36_00575 PF00004 ATPase family associated with various cellular activities (AAA) NDK36_00575 PF07724 AAA domain (Cdc48 subfamily) NDK36_00580 PF18073 Rubredoxin metal binding domain NDK36_00585 PF10635 DisA bacterial checkpoint controller linker region NDK36_00585 PF02457 DisA bacterial checkpoint controller nucleotide-binding NDK36_00595 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase NDK36_00600 PF02542 YgbB family NDK36_00605 PF00749 tRNA synthetases class I (E and Q), catalytic domain NDK36_00610 PF00132 Bacterial transferase hexapeptide (six repeats) NDK36_00610 PF06426 Serine acetyltransferase, N-terminal NDK36_00615 PF09190 DALR domain NDK36_00615 PF01406 tRNA synthetases class I (C) catalytic domain NDK36_00620 PF00636 Ribonuclease III domain NDK36_00625 PF00588 SpoU rRNA Methylase family NDK36_00625 PF08032 RNA 2'-O ribose methyltransferase substrate binding NDK36_00630 PF05991 YacP-like NYN domain NDK36_00635 PF04542 Sigma-70 region 2 NDK36_00635 PF08281 Sigma-70, region 4 NDK36_00640 PF00471 Ribosomal protein L33 NDK36_00645 PF00584 SecE/Sec61-gamma subunits of protein translocation complex NDK36_00650 PF02357 Transcription termination factor nusG NDK36_00650 PF00467 KOW motif NDK36_00655 PF00298 Ribosomal protein L11, RNA binding domain NDK36_00655 PF03946 Ribosomal protein L11, N-terminal domain NDK36_00660 PF00687 Ribosomal protein L1p/L10e family NDK36_00665 PF00466 Ribosomal protein L10 NDK36_00670 PF00542 Ribosomal protein L7/L12 C-terminal domain NDK36_00670 PF16320 Ribosomal protein L7/L12 dimerisation domain NDK36_00675 PF05175 Methyltransferase small domain NDK36_00680 PF04563 RNA polymerase beta subunit NDK36_00680 PF04561 RNA polymerase Rpb2, domain 2 NDK36_00680 PF04565 RNA polymerase Rpb2, domain 3 NDK36_00680 PF10385 RNA polymerase beta subunit external 1 domain NDK36_00680 PF00562 RNA polymerase Rpb2, domain 6 NDK36_00680 PF04560 RNA polymerase Rpb2, domain 7 NDK36_00685 PF04998 RNA polymerase Rpb1, domain 5 NDK36_00685 PF05000 RNA polymerase Rpb1, domain 4 NDK36_00685 PF00623 RNA polymerase Rpb1, domain 2 NDK36_00685 PF04997 RNA polymerase Rpb1, domain 1 NDK36_00685 PF04983 RNA polymerase Rpb1, domain 3 NDK36_00690 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family NDK36_00695 PF00164 Ribosomal protein S12/S23 NDK36_00700 PF00177 Ribosomal protein S7p/S5e NDK36_00705 PF00679 Elongation factor G C-terminus NDK36_00705 PF14492 Elongation Factor G, domain II NDK36_00705 PF03764 Elongation factor G, domain IV NDK36_00705 PF00009 Elongation factor Tu GTP binding domain NDK36_00705 PF03144 Elongation factor Tu domain 2 NDK36_00710 PF00009 Elongation factor Tu GTP binding domain NDK36_00710 PF03144 Elongation factor Tu domain 2 NDK36_00710 PF03143 Elongation factor Tu C-terminal domain NDK36_00715 PF12146 Serine aminopeptidase, S33 NDK36_00720 PF00338 Ribosomal protein S10p/S20e NDK36_00725 PF00297 Ribosomal protein L3 NDK36_00730 PF00573 Ribosomal protein L4/L1 family NDK36_00735 PF00276 Ribosomal protein L23 NDK36_00740 PF00181 Ribosomal Proteins L2, RNA binding domain NDK36_00740 PF03947 Ribosomal Proteins L2, C-terminal domain NDK36_00745 PF00203 Ribosomal protein S19 NDK36_00750 PF00237 Ribosomal protein L22p/L17e NDK36_00755 PF07650 KH domain NDK36_00755 PF00189 Ribosomal protein S3, C-terminal domain NDK36_00760 PF00252 Ribosomal protein L16p/L10e NDK36_00765 PF00831 Ribosomal L29 protein NDK36_00770 PF00366 Ribosomal protein S17 NDK36_00775 PF00238 Ribosomal protein L14p/L23e NDK36_00780 PF00467 KOW motif NDK36_00780 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 NDK36_00785 PF00281 Ribosomal protein L5 NDK36_00785 PF00673 ribosomal L5P family C-terminus NDK36_00790 PF00253 Ribosomal protein S14p/S29e NDK36_00795 PF00410 Ribosomal protein S8 NDK36_00800 PF00347 Ribosomal protein L6 NDK36_00805 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast NDK36_00810 PF00333 Ribosomal protein S5, N-terminal domain NDK36_00810 PF03719 Ribosomal protein S5, C-terminal domain NDK36_00815 PF00327 Ribosomal protein L30p/L7e NDK36_00820 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A NDK36_00825 PF00344 SecY translocase NDK36_00830 PF05191 Adenylate kinase, active site lid NDK36_00835 PF00557 Metallopeptidase family M24 NDK36_00845 PF01176 Translation initiation factor 1A / IF-1 NDK36_00850 PF00444 Ribosomal protein L36 NDK36_00855 PF00416 Ribosomal protein S13/S18 NDK36_00860 PF00411 Ribosomal protein S11 NDK36_00865 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain NDK36_00865 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain NDK36_00865 PF01000 RNA polymerase Rpb3/RpoA insert domain NDK36_00870 PF01196 Ribosomal protein L17 NDK36_00875 PF00005 ABC transporter NDK36_00880 PF00005 ABC transporter NDK36_00885 PF02361 Cobalt transport protein NDK36_00890 PF01416 tRNA pseudouridine synthase NDK36_00895 PF00572 Ribosomal protein L13 NDK36_00900 PF00380 Ribosomal protein S9/S16 NDK36_00905 PF08241 Methyltransferase domain NDK36_00910 PF10730 Protein of unknown function (DUF2521) NDK36_00915 PF01520 N-acetylmuramoyl-L-alanine amidase NDK36_00920 PF10609 NUBPL iron-transfer P-loop NTPase NDK36_00925 PF17898 Spore germination GerD central core domain NDK36_00930 PF14089 KinB-signalling pathway activation in sporulation NDK36_00935 PF01522 Polysaccharide deacetylase NDK36_01005 PF00916 Sulfate permease family NDK36_01005 PF01740 STAS domain NDK36_01010 PF01758 Sodium Bile acid symporter family NDK36_01015 PF00756 Putative esterase NDK36_01020 PF01032 FecCD transport family NDK36_01025 PF01032 FecCD transport family NDK36_01030 PF01497 Periplasmic binding protein NDK36_01035 PF12833 Helix-turn-helix domain NDK36_01035 PF01497 Periplasmic binding protein NDK36_01040 PF07075 Protein of unknown function (DUF1343) NDK36_01045 PF00933 Glycosyl hydrolase family 3 N terminal domain NDK36_01045 PF01915 Glycosyl hydrolase family 3 C-terminal domain NDK36_01050 PF00144 Beta-lactamase NDK36_01055 PF00367 phosphotransferase system, EIIB NDK36_01055 PF02378 Phosphotransferase system, EIIC NDK36_01060 PF01418 Helix-turn-helix domain, rpiR family NDK36_01060 PF01380 SIS domain NDK36_01065 PF01380 SIS domain NDK36_01075 PF04463 Protein of unknown function (DUF523) NDK36_01105 PF04542 Sigma-70 region 2 NDK36_01105 PF08281 Sigma-70, region 4 NDK36_01110 PF13490 Putative zinc-finger NDK36_01115 PF02457 DisA bacterial checkpoint controller nucleotide-binding NDK36_01120 PF07949 YbbR-like protein NDK36_01125 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I NDK36_01125 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II NDK36_01125 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III NDK36_01125 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain NDK36_01130 PF01380 SIS domain NDK36_01145 PF02805 Metal binding domain of Ada NDK36_01145 PF12833 Helix-turn-helix domain NDK36_01150 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain NDK36_01150 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain NDK36_01155 PF00361 Proton-conducting membrane transporter NDK36_01155 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus NDK36_01160 PF10070 Uncharacterized protein conserved in bacteria (DUF2309) NDK36_01175 PF10057 Uncharacterized conserved protein (DUF2294) NDK36_01185 PF00672 HAMP domain NDK36_01185 PF00512 His Kinase A (phospho-acceptor) domain NDK36_01195 PF00069 Protein kinase domain NDK36_01205 PF16226 Domain of unknown function (DUF4885) NDK36_01210 PF00324 Amino acid permease NDK36_01215 PF17334 Minor curli fiber component A NDK36_01220 PF17340 Family of unknown function (DUF5370) NDK36_01225 PF00905 Penicillin binding protein transpeptidase domain NDK36_01230 PF00067 Cytochrome P450 NDK36_01240 PF13520 Amino acid permease NDK36_01245 PF03009 Glycerophosphoryl diester phosphodiesterase family NDK36_01250 PF07690 Major Facilitator Superfamily NDK36_01255 PF10852 Protein of unknown function (DUF2651) NDK36_01260 PF01047 MarR family NDK36_01260 PF00583 Acetyltransferase (GNAT) family NDK36_01275 PF08924 Domain of unknown function (DUF1906) NDK36_01275 PF01471 Putative peptidoglycan binding domain NDK36_01280 PF00892 EamA-like transporter family NDK36_01285 PF02311 AraC-like ligand binding domain NDK36_01285 PF12833 Helix-turn-helix domain NDK36_01295 PF04688 SPP1 phage holin NDK36_01300 PF05257 CHAP domain NDK36_01300 PF01476 LysM domain NDK36_01310 PF02222 ATP-grasp domain NDK36_01315 PF00089 Trypsin NDK36_01320 PF10794 Protein of unknown function (DUF2606) NDK36_01325 PF12697 Alpha/beta hydrolase family NDK36_01330 PF01066 CDP-alcohol phosphatidyltransferase NDK36_01335 PF09335 SNARE associated Golgi protein NDK36_01340 PF02666 Phosphatidylserine decarboxylase NDK36_01350 PF05139 Erythromycin esterase NDK36_01355 PF12833 Helix-turn-helix domain NDK36_01360 PF00581 Rhodanese-like domain NDK36_01360 PF12368 Rhodanase C-terminal NDK36_01360 PF17773 UPF0176 acylphosphatase like domain NDK36_01365 PF00375 Sodium:dicarboxylate symporter family NDK36_01370 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 NDK36_01370 PF00367 phosphotransferase system, EIIB NDK36_01370 PF02378 Phosphotransferase system, EIIC NDK36_01375 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase NDK36_01380 PF07702 UTRA domain NDK36_01380 PF00392 Bacterial regulatory proteins, gntR family NDK36_01385 PF07853 Protein of unknown function (DUF1648) NDK36_01390 PF01063 Amino-transferase class IV NDK36_01395 PF00324 Amino acid permease NDK36_01400 PF02574 Homocysteine S-methyltransferase NDK36_01410 PF04960 Glutaminase NDK36_01415 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NDK36_01420 PF00072 Response regulator receiver domain NDK36_01420 PF08664 YcbB domain NDK36_01425 PF00701 Dihydrodipicolinate synthetase family NDK36_01430 PF00171 Aldehyde dehydrogenase family NDK36_01435 PF07690 Major Facilitator Superfamily NDK36_01440 PF13378 Enolase C-terminal domain-like NDK36_01445 PF07729 FCD domain NDK36_01445 PF00392 Bacterial regulatory proteins, gntR family NDK36_01450 PF08666 SAF domain NDK36_01450 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus NDK36_01455 PF01636 Phosphotransferase enzyme family NDK36_01460 PF15777 Tryptophan RNA-binding attenuator protein inhibitory protein NDK36_01465 PF00892 EamA-like transporter family NDK36_01470 PF00486 Transcriptional regulatory protein, C terminal NDK36_01470 PF00072 Response regulator receiver domain NDK36_01475 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NDK36_01475 PF00512 His Kinase A (phospho-acceptor) domain NDK36_01480 PF00005 ABC transporter NDK36_01495 PF10710 Protein of unknown function (DUF2512) NDK36_01500 PF07486 Cell Wall Hydrolase NDK36_01505 PF10138 vWA found in TerF C terminus NDK36_01515 PF09423 PhoD-like phosphatase NDK36_01515 PF16655 PhoD-like phosphatase, N-terminal domain NDK36_01520 PF02416 mttA/Hcf106 family NDK36_01525 PF00902 Sec-independent protein translocase protein (TatC) NDK36_01530 PF01470 Pyroglutamyl peptidase NDK36_01535 PF00266 Aminotransferase class-V NDK36_01540 PF07690 Major Facilitator Superfamily NDK36_01545 PF00440 Bacterial regulatory proteins, tetR family NDK36_01550 PF00710 Asparaginase, N-terminal NDK36_01550 PF17763 Glutaminase/Asparaginase C-terminal domain NDK36_01555 PF01674 Lipase (class 2) NDK36_01560 PF06271 RDD family NDK36_01565 PF05225 helix-turn-helix, Psq domain NDK36_01565 PF02810 SEC-C motif NDK36_01575 PF04397 LytTr DNA-binding domain NDK36_01575 PF00072 Response regulator receiver domain NDK36_01585 PF12679 ABC-2 family transporter protein NDK36_01590 PF00248 Aldo/keto reductase family NDK36_01595 PF17118 Domain of unknown function (DUF5105) NDK36_01595 PF11611 Domain of unknown function (DUF4352) NDK36_01605 PF16244 Domain of unknown function (DUF4901) NDK36_01610 PF16244 Domain of unknown function (DUF4901) NDK36_01615 PF13539 D-alanyl-D-alanine carboxypeptidase NDK36_01630 PF00128 Alpha amylase, catalytic domain NDK36_01635 PF01297 Zinc-uptake complex component A periplasmic NDK36_01640 PF00005 ABC transporter NDK36_01645 PF00950 ABC 3 transport family NDK36_01655 PF02342 TerD domain NDK36_01660 PF02342 TerD domain NDK36_01665 PF02342 TerD domain NDK36_01670 PF03741 Integral membrane protein TerC family NDK36_01675 PF14266 Putative component of 'biosynthetic module' NDK36_01680 PF05816 Toxic anion resistance protein (TelA) NDK36_01690 PF07690 Major Facilitator Superfamily NDK36_01695 PF07690 Major Facilitator Superfamily NDK36_01705 PF00571 CBS domain NDK36_01705 PF00005 ABC transporter NDK36_01710 PF00528 Binding-protein-dependent transport system inner membrane component NDK36_01715 PF04069 Substrate binding domain of ABC-type glycine betaine transport system NDK36_01720 PF07687 Peptidase dimerisation domain NDK36_01720 PF01546 Peptidase family M20/M25/M40 NDK36_01725 PF03606 C4-dicarboxylate anaerobic carrier NDK36_01740 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain NDK36_01740 PF00056 lactate/malate dehydrogenase, NAD binding domain NDK36_01755 PF08892 YqcI/YcgG family NDK36_01770 PF02540 NAD synthase NDK36_01780 PF01202 Shikimate kinase NDK36_01790 PF08241 Methyltransferase domain NDK36_01795 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NDK36_01795 PF03466 LysR substrate binding domain NDK36_01800 PF05448 Acetyl xylan esterase (AXE1) NDK36_01805 PF10127 RNA repair pathway DNA polymerase beta family NDK36_01810 PF01619 Proline dehydrogenase NDK36_01815 PF00171 Aldehyde dehydrogenase family NDK36_01820 PF00474 Sodium:solute symporter family NDK36_01825 PF17853 GGDEF-like domain NDK36_01825 PF13556 PucR C-terminal helix-turn-helix domain NDK36_01830 PF09323 Domain of unknown function (DUF1980) NDK36_01835 PF03773 Predicted permease NDK36_01840 PF00561 alpha/beta hydrolase fold NDK36_01845 PF07992 Pyridine nucleotide-disulphide oxidoreductase NDK36_01850 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases NDK36_01855 PF00355 Rieske [2Fe-2S] domain NDK36_01860 PF04324 BFD-like [2Fe-2S] binding domain NDK36_01860 PF01077 Nitrite and sulphite reductase 4Fe-4S domain NDK36_01860 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain NDK36_01860 PF07992 Pyridine nucleotide-disulphide oxidoreductase NDK36_01860 PF18267 Rubredoxin NAD+ reductase C-terminal domain NDK36_01865 PF01568 Molydopterin dinucleotide binding domain NDK36_01865 PF04879 Molybdopterin oxidoreductase Fe4S4 domain NDK36_01865 PF00384 Molybdopterin oxidoreductase NDK36_01870 PF18267 Rubredoxin NAD+ reductase C-terminal domain NDK36_01870 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain NDK36_01870 PF07992 Pyridine nucleotide-disulphide oxidoreductase NDK36_01870 PF04324 BFD-like [2Fe-2S] binding domain NDK36_01875 PF07690 Major Facilitator Superfamily NDK36_01885 PF03734 L,D-transpeptidase catalytic domain NDK36_01900 PF00528 Binding-protein-dependent transport system inner membrane component NDK36_01905 PF00497 Bacterial extracellular solute-binding proteins, family 3 NDK36_01915 PF06271 RDD family NDK36_01920 PF10925 Protein of unknown function (DUF2680) NDK36_01925 PF01047 MarR family NDK36_01940 PF00232 Glycosyl hydrolase family 1 NDK36_01945 PF11033 Competence protein J (ComJ) NDK36_01950 PF14040 Deoxyribonuclease NucA/NucB NDK36_01960 PF01380 SIS domain NDK36_01965 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family NDK36_01970 PF01638 HxlR-like helix-turn-helix NDK36_01975 PF00550 Phosphopantetheine attachment site NDK36_01975 PF13193 AMP-binding enzyme C-terminal domain NDK36_01975 PF00668 Condensation domain NDK36_01975 PF00501 AMP-binding enzyme NDK36_01985 PF17584 Bacillus competence protein S NDK36_01995 PF00501 AMP-binding enzyme NDK36_01995 PF13193 AMP-binding enzyme C-terminal domain NDK36_01995 PF00668 Condensation domain NDK36_01995 PF00550 Phosphopantetheine attachment site NDK36_02000 PF00975 Thioesterase domain NDK36_02000 PF00550 Phosphopantetheine attachment site NDK36_02000 PF13193 AMP-binding enzyme C-terminal domain NDK36_02000 PF00668 Condensation domain NDK36_02000 PF00501 AMP-binding enzyme NDK36_02005 PF00975 Thioesterase domain NDK36_02010 PF07690 Major Facilitator Superfamily NDK36_02015 PF14317 YcxB-like protein NDK36_02020 PF00892 EamA-like transporter family NDK36_02025 PF00155 Aminotransferase class I and II NDK36_02025 PF00392 Bacterial regulatory proteins, gntR family NDK36_02030 PF01648 4'-phosphopantetheinyl transferase superfamily NDK36_02040 PF00005 ABC transporter NDK36_02045 PF00528 Binding-protein-dependent transport system inner membrane component NDK36_02050 PF00497 Bacterial extracellular solute-binding proteins, family 3 NDK36_02055 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NDK36_02055 PF03466 LysR substrate binding domain NDK36_02060 PF02441 Flavoprotein NDK36_02065 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase NDK36_02080 PF00561 alpha/beta hydrolase fold NDK36_02085 PF00854 POT family NDK36_02090 PF12708 Pectate lyase superfamily protein NDK36_02090 PF13229 Right handed beta helix region NDK36_02100 PF03323 Bacillus/Clostridium GerA spore germination protein NDK36_02105 PF05504 Spore germination B3/ GerAC like, C-terminal NDK36_02110 PF03845 Spore germination protein NDK36_02115 PF00005 ABC transporter NDK36_02120 PF02687 FtsX-like permease family NDK36_02120 PF12704 MacB-like periplasmic core domain NDK36_02125 PF00072 Response regulator receiver domain NDK36_02125 PF00486 Transcriptional regulatory protein, C terminal NDK36_02130 PF00512 His Kinase A (phospho-acceptor) domain NDK36_02130 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NDK36_02130 PF00672 HAMP domain NDK36_02135 PF18801 response regulator aspartate phosphatase H, N terminal NDK36_02140 PF11131 Rap-phr extracellular signalling NDK36_02145 PF09680 Family of unknown function NDK36_02150 PF09680 Family of unknown function NDK36_02155 PF00696 Amino acid kinase family NDK36_02155 PF13840 ACT domain NDK36_02160 PF01032 FecCD transport family NDK36_02165 PF01032 FecCD transport family NDK36_02170 PF00005 ABC transporter NDK36_02175 PF01497 Periplasmic binding protein NDK36_02185 PF07690 Major Facilitator Superfamily NDK36_02190 PF00440 Bacterial regulatory proteins, tetR family NDK36_02195 PF00881 Nitroreductase family NDK36_02200 PF03992 Antibiotic biosynthesis monooxygenase NDK36_02205 PF01022 Bacterial regulatory protein, arsR family NDK36_02210 PF00155 Aminotransferase class I and II NDK36_02210 PF00392 Bacterial regulatory proteins, gntR family NDK36_02215 PF00202 Aminotransferase class-III NDK36_02220 PF00171 Aldehyde dehydrogenase family NDK36_02225 PF06800 Sugar transport protein NDK36_02235 PF07987 Domain of unkown function (DUF1775) NDK36_02240 PF04234 CopC domain NDK36_02240 PF05425 Copper resistance protein D NDK36_02240 PF13115 YtkA-like NDK36_02245 PF05573 NosL NDK36_02245 PF08220 DeoR-like helix-turn-helix domain NDK36_02255 PF02378 Phosphotransferase system, EIIC NDK36_02255 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit NDK36_02260 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 NDK36_02265 PF08125 Mannitol dehydrogenase C-terminal domain NDK36_02265 PF01232 Mannitol dehydrogenase Rossmann domain NDK36_02270 PF00180 Isocitrate/isopropylmalate dehydrogenase NDK36_02275 PF10502 Signal peptidase, peptidase S26 NDK36_02285 PF07977 FabA-like domain NDK36_02300 PF03746 LamB/YcsF family NDK36_02305 PF01566 Natural resistance-associated macrophage protein NDK36_02310 PF07286 Protein of unknown function (DUF1445) NDK36_02315 PF02682 Carboxyltransferase domain, subdomain C and D NDK36_02320 PF02626 Carboxyltransferase domain, subdomain A and B NDK36_02325 PF09339 IclR helix-turn-helix domain NDK36_02325 PF01614 Bacterial transcriptional regulator NDK36_02330 PF13472 GDSL-like Lipase/Acylhydrolase family NDK36_02335 PF13129 Protein of unknown function (DUF3953) NDK36_02340 PF03992 Antibiotic biosynthesis monooxygenase NDK36_02345 PF05223 NTF2-like N-terminal transpeptidase domain NDK36_02345 PF03717 Penicillin-binding Protein dimerisation domain NDK36_02345 PF00905 Penicillin binding protein transpeptidase domain NDK36_02350 PF00248 Aldo/keto reductase family NDK36_02355 PF05043 Mga helix-turn-helix domain NDK36_02355 PF08279 HTH domain NDK36_02355 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 NDK36_02355 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit NDK36_02355 PF00874 PRD domain NDK36_02360 PF00501 AMP-binding enzyme NDK36_02360 PF13193 AMP-binding enzyme C-terminal domain NDK36_02365 PF13649 Methyltransferase domain NDK36_02380 PF13302 Acetyltransferase (GNAT) domain NDK36_02385 PF16242 Pyridoxamine 5'-phosphate oxidase like NDK36_02390 PF10997 Alternate to MurJ NDK36_02395 PF12823 Domain of unknown function (DUF3817) NDK36_02400 PF01037 Lrp/AsnC ligand binding domain NDK36_02405 PF01131 DNA topoisomerase NDK36_02405 PF01751 Toprim domain NDK36_02410 PF00293 NUDIX domain NDK36_02415 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain NDK36_02415 PF00205 Thiamine pyrophosphate enzyme, central domain NDK36_02415 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain NDK36_02440 PF01566 Natural resistance-associated macrophage protein NDK36_02445 PF04226 Transglycosylase associated protein NDK36_02450 PF09954 Uncharacterized protein conserved in bacteria (DUF2188) NDK36_02455 PF12787 EcsC protein family NDK36_02460 PF00477 Small hydrophilic plant seed protein NDK36_02460 PF10685 Stress-induced bacterial acidophilic repeat motif NDK36_02465 PF07883 Cupin domain NDK36_02470 PF16291 Domain of unknown function (DUF4937 NDK36_02475 PF05067 Manganese containing catalase NDK36_02480 PF03480 Bacterial extracellular solute-binding protein, family 7 NDK36_02485 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain NDK36_02485 PF17203 Single cache domain 3 NDK36_02485 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NDK36_02490 PF08279 HTH domain NDK36_02490 PF00072 Response regulator receiver domain NDK36_02495 PF00375 Sodium:dicarboxylate symporter family NDK36_02500 PF01594 AI-2E family transporter NDK36_02510 PF00005 ABC transporter NDK36_02525 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NDK36_02525 PF08028 Acyl-CoA dehydrogenase, C-terminal domain NDK36_02525 PF02770 Acyl-CoA dehydrogenase, middle domain NDK36_02530 PF13040 Fur-regulated basic protein B NDK36_02540 PF01545 Cation efflux family NDK36_02540 PF16916 Dimerisation domain of Zinc Transporter NDK36_02545 PF00085 Thioredoxin NDK36_02550 PF01820 D-ala D-ala ligase N-terminus NDK36_02550 PF07478 D-ala D-ala ligase C-terminus NDK36_02555 PF01225 Mur ligase family, catalytic domain NDK36_02555 PF02875 Mur ligase family, glutamate ligase domain NDK36_02555 PF08245 Mur ligase middle domain NDK36_02560 PF00271 Helicase conserved C-terminal domain NDK36_02560 PF00270 DEAD/DEAH box helicase NDK36_02565 PF03703 Bacterial PH domain NDK36_02570 PF03703 Bacterial PH domain NDK36_02575 PF01694 Rhomboid family NDK36_02580 PF01648 4'-phosphopantetheinyl transferase superfamily NDK36_02590 PF00842 Alanine racemase, C-terminal domain NDK36_02590 PF01168 Alanine racemase, N-terminal domain NDK36_02595 PF01402 Ribbon-helix-helix protein, copG family NDK36_02600 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system NDK36_02605 PF01740 STAS domain NDK36_02605 PF08678 Rsbr N terminal NDK36_02610 PF01740 STAS domain NDK36_02615 PF13581 Histidine kinase-like ATPase domain NDK36_02620 PF07228 Stage II sporulation protein E (SpoIIE) NDK36_02620 PF08673 Phosphoserine phosphatase RsbU, N-terminal domain NDK36_02625 PF01740 STAS domain NDK36_02630 PF13581 Histidine kinase-like ATPase domain NDK36_02635 PF04542 Sigma-70 region 2 NDK36_02635 PF04539 Sigma-70 region 3 NDK36_02635 PF04545 Sigma-70, region 4 NDK36_02640 PF07228 Stage II sporulation protein E (SpoIIE) NDK36_02655 PF01878 EVE domain NDK36_02660 PF01047 MarR family NDK36_02665 PF00575 S1 RNA binding domain NDK36_02665 PF09371 Tex-like protein N-terminal domain NDK36_02665 PF16921 Tex protein YqgF-like domain NDK36_02665 PF17674 HHH domain NDK36_02675 PF10263 SprT-like family NDK36_02675 PF17283 SprT-like zinc ribbon domain NDK36_02715 PF14659 Phage integrase, N-terminal SAM-like domain NDK36_02715 PF00589 Phage integrase family NDK36_02720 PF06114 IrrE N-terminal-like domain NDK36_02725 PF01381 Helix-turn-helix NDK36_02750 PF06125 Bacterial protein of unknown function (DUF961) NDK36_02760 PF18106 Rolling Circle replication initiation protein N-terminal domain NDK36_02760 PF02486 Replication initiation factor NDK36_02785 PF12642 Conjugative transposon protein TcpC NDK36_02795 PF12648 TcpE family NDK36_02805 PF08960 Domain of unknown function (DUF1874) NDK36_02820 PF00877 NlpC/P60 family NDK36_02830 PF14729 Domain of unknown function with cystatin-like fold (DUF4467) NDK36_02835 PF18801 response regulator aspartate phosphatase H, N terminal NDK36_02850 PF01609 Transposase DDE domain NDK36_02875 PF03466 LysR substrate binding domain NDK36_02875 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NDK36_02880 PF13302 Acetyltransferase (GNAT) domain NDK36_02890 PF04740 LXG domain of WXG superfamily NDK36_02890 PF14411 A nuclease of the HNH/ENDO VII superfamily with conserved LHH NDK36_02895 PF01381 Helix-turn-helix NDK36_02920 PF01965 DJ-1/PfpI family NDK36_02925 PF00313 'Cold-shock' DNA-binding domain NDK36_02930 PF02559 CarD-like/TRCF domain NDK36_02935 PF00892 EamA-like transporter family NDK36_02940 PF12833 Helix-turn-helix domain NDK36_02940 PF02311 AraC-like ligand binding domain NDK36_02950 PF12833 Helix-turn-helix domain NDK36_02950 PF06445 GyrI-like small molecule binding domain NDK36_02955 PF00392 Bacterial regulatory proteins, gntR family NDK36_02955 PF00155 Aminotransferase class I and II NDK36_02970 PF08818 Domain of unknown function (DU1801) NDK36_02985 PF00381 PTS HPr component phosphorylation site NDK36_02990 PF00440 Bacterial regulatory proteins, tetR family NDK36_02995 PF00892 EamA-like transporter family NDK36_03000 PF00392 Bacterial regulatory proteins, gntR family NDK36_03000 PF00155 Aminotransferase class I and II NDK36_03005 PF01575 MaoC like domain NDK36_03010 PF06821 Serine hydrolase NDK36_03020 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) NDK36_03020 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 NDK36_03025 PF01022 Bacterial regulatory protein, arsR family NDK36_03030 PF02040 Arsenical pump membrane protein NDK36_03040 PF12746 GNAT acetyltransferase NDK36_03045 PF00892 EamA-like transporter family NDK36_03050 PF00155 Aminotransferase class I and II NDK36_03050 PF00392 Bacterial regulatory proteins, gntR family NDK36_03055 PF00282 Pyridoxal-dependent decarboxylase conserved domain NDK36_03060 PF01613 Flavin reductase like domain NDK36_03070 PF02627 Carboxymuconolactone decarboxylase family NDK36_03085 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NDK36_03085 PF07730 Histidine kinase NDK36_03090 PF00196 Bacterial regulatory proteins, luxR family NDK36_03090 PF00072 Response regulator receiver domain NDK36_03095 PF03176 MMPL family NDK36_03100 PF12697 Alpha/beta hydrolase family NDK36_03105 PF04474 Protein of unknown function (DUF554) NDK36_03110 PF13411 MerR HTH family regulatory protein NDK36_03110 PF06445 GyrI-like small molecule binding domain NDK36_03115 PF16916 Dimerisation domain of Zinc Transporter NDK36_03115 PF01545 Cation efflux family NDK36_03120 PF00881 Nitroreductase family NDK36_03125 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily NDK36_03130 PF07681 DoxX NDK36_03135 PF00085 Thioredoxin NDK36_03145 PF10676 Spore germination protein gerPA/gerPF NDK36_03155 PF10676 Spore germination protein gerPA/gerPF NDK36_03165 PF04239 Protein of unknown function (DUF421) NDK36_03170 PF00011 Hsp20/alpha crystallin family NDK36_03175 PF10676 Spore germination protein gerPA/gerPF NDK36_03180 PF10676 Spore germination protein gerPA/gerPF NDK36_03185 PF00440 Bacterial regulatory proteins, tetR family NDK36_03190 PF13564 DoxX-like family NDK36_03195 PF00583 Acetyltransferase (GNAT) family NDK36_03200 PF12848 ABC transporter NDK36_03200 PF00005 ABC transporter NDK36_03205 PF00324 Amino acid permease NDK36_03210 PF05163 DinB family NDK36_03215 PF01047 MarR family NDK36_03220 PF03176 MMPL family NDK36_03225 PF00881 Nitroreductase family NDK36_03230 PF01047 MarR family NDK36_03235 PF07690 Major Facilitator Superfamily NDK36_03240 PF01925 Sulfite exporter TauE/SafE NDK36_03245 PF07729 FCD domain NDK36_03245 PF00392 Bacterial regulatory proteins, gntR family NDK36_03250 PF00704 Glycosyl hydrolases family 18 NDK36_03250 PF01476 LysM domain NDK36_03255 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase NDK36_03260 PF11611 Domain of unknown function (DUF4352) NDK36_03260 PF08139 Prokaryotic membrane lipoprotein lipid attachment site NDK36_03265 PF00245 Alkaline phosphatase NDK36_03270 PF08818 Domain of unknown function (DU1801) NDK36_03275 PF16302 Domain of unknown function (DUF4944) NDK36_03280 PF00583 Acetyltransferase (GNAT) family NDK36_03285 PF01966 HD domain NDK36_03290 PF07563 Protein of unknown function (DUF1541) NDK36_03295 PF07690 Major Facilitator Superfamily NDK36_03300 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit NDK36_03315 PF00232 Glycosyl hydrolase family 1 NDK36_03320 PF00392 Bacterial regulatory proteins, gntR family NDK36_03320 PF07702 UTRA domain NDK36_03325 PF00480 ROK family NDK36_03335 PF02156 Glycosyl hydrolase family 26 NDK36_03380 PF00586 AIR synthase related protein, N-terminal domain NDK36_03380 PF02769 AIR synthase related protein, C-terminal domain NDK36_03385 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE NDK36_03390 PF00814 Glycoprotease family NDK36_03395 PF00583 Acetyltransferase (GNAT) family NDK36_03400 PF00814 Glycoprotease family NDK36_03405 PF12848 ABC transporter NDK36_03405 PF16326 ABC transporter C-terminal domain NDK36_03405 PF00005 ABC transporter NDK36_03410 PF01967 MoaC family NDK36_03415 PF02629 CoA binding domain NDK36_03415 PF06971 Putative DNA-binding protein N-terminus NDK36_03420 PF02416 mttA/Hcf106 family NDK36_03425 PF00902 Sec-independent protein translocase protein (TatC) NDK36_03430 PF14146 Domain of unknown function (DUF4305) NDK36_03435 PF02517 CPBP intramembrane metalloprotease NDK36_03440 PF00166 Chaperonin 10 Kd subunit NDK36_03445 PF00118 TCP-1/cpn60 chaperonin family NDK36_03465 PF00931 NB-ARC domain NDK36_03465 PF13176 Tetratricopeptide repeat NDK36_03470 PF00107 Zinc-binding dehydrogenase NDK36_03470 PF08240 Alcohol dehydrogenase GroES-like domain NDK36_03480 PF00294 pfkB family carbohydrate kinase NDK36_03490 PF08271 TFIIB zinc-binding NDK36_03495 PF04536 TPM domain NDK36_03500 PF13421 SPFH domain-Band 7 family NDK36_03505 PF07885 Ion channel NDK36_03510 PF00083 Sugar (and other) transporter NDK36_03515 PF08240 Alcohol dehydrogenase GroES-like domain NDK36_03515 PF00107 Zinc-binding dehydrogenase NDK36_03520 PF03330 Lytic transglycolase NDK36_03525 PF07676 WD40-like Beta Propeller Repeat NDK36_03540 PF14169 Cold-inducible protein YdjO NDK36_03545 PF12697 Alpha/beta hydrolase family NDK36_03555 PF07732 Multicopper oxidase NDK36_03555 PF07731 Multicopper oxidase NDK36_03555 PF00394 Multicopper oxidase NDK36_03560 PF00324 Amino acid permease NDK36_03570 PF01545 Cation efflux family NDK36_03570 PF16916 Dimerisation domain of Zinc Transporter NDK36_03575 PF07726 ATPase family associated with various cellular activities (AAA) NDK36_03575 PF17863 AAA lid domain NDK36_03580 PF01882 Protein of unknown function DUF58 NDK36_03585 PF11992 Domain of unknown function (DUF3488) NDK36_03585 PF13559 Domain of unknown function (DUF4129) NDK36_03585 PF01841 Transglutaminase-like superfamily NDK36_03590 PF00117 Glutamine amidotransferase class-I NDK36_03590 PF00958 GMP synthase C terminal domain NDK36_03590 PF02540 NAD synthase NDK36_03600 PF00860 Permease family NDK36_03610 PF13076 Fur-regulated basic protein A NDK36_03615 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) NDK36_03620 PF14044 NETI protein NDK36_03625 PF00731 AIR carboxylase NDK36_03630 PF02222 ATP-grasp domain NDK36_03630 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain NDK36_03635 PF10397 Adenylosuccinate lyase C-terminus NDK36_03635 PF00206 Lyase NDK36_03640 PF01259 SAICAR synthetase NDK36_03645 PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase NDK36_03655 PF02769 AIR synthase related protein, C-terminal domain NDK36_03655 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain NDK36_03655 PF00586 AIR synthase related protein, N-terminal domain NDK36_03660 PF00156 Phosphoribosyl transferase domain NDK36_03665 PF02769 AIR synthase related protein, C-terminal domain NDK36_03665 PF00586 AIR synthase related protein, N-terminal domain NDK36_03670 PF00551 Formyl transferase NDK36_03675 PF01808 AICARFT/IMPCHase bienzyme NDK36_03675 PF02142 MGS-like domain NDK36_03680 PF02843 Phosphoribosylglycinamide synthetase, C domain NDK36_03680 PF02844 Phosphoribosylglycinamide synthetase, N domain NDK36_03680 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain NDK36_03685 PF01037 Lrp/AsnC ligand binding domain NDK36_03690 PF13520 Amino acid permease NDK36_03700 PF13382 Adenine deaminase C-terminal domain NDK36_03700 PF01979 Amidohydrolase family NDK36_03705 PF11258 Protein of unknown function (DUF3048) N-terminal domain NDK36_03705 PF17479 Protein of unknown function (DUF3048) C-terminal domain NDK36_03710 PF01371 Trp repressor protein NDK36_03715 PF01645 Conserved region in glutamate synthase NDK36_03720 PF01884 PcrB family NDK36_03725 PF00580 UvrD/REP helicase N-terminal domain NDK36_03725 PF13361 UvrD-like helicase C-terminal domain NDK36_03730 PF12826 Helix-hairpin-helix motif NDK36_03730 PF03119 NAD-dependent DNA ligase C4 zinc finger domain NDK36_03730 PF03120 NAD-dependent DNA ligase OB-fold domain NDK36_03730 PF01653 NAD-dependent DNA ligase adenylation domain NDK36_03730 PF00533 BRCA1 C Terminus (BRCT) domain NDK36_03735 PF07537 CamS sex pheromone cAM373 precursor NDK36_03745 PF01636 Phosphotransferase enzyme family NDK36_03750 PF02308 MgtC family NDK36_03755 PF00474 Sodium:solute symporter family NDK36_03760 PF02686 Glu-tRNAGln amidotransferase C subunit NDK36_03765 PF01425 Amidase NDK36_03770 PF02934 GatB/GatE catalytic domain NDK36_03770 PF02637 GatB domain NDK36_03780 PF00873 AcrB/AcrD/AcrF family NDK36_03785 PF00781 Diacylglycerol kinase catalytic domain NDK36_03790 PF01938 TRAM domain NDK36_03790 PF05958 tRNA (Uracil-5-)-methyltransferase NDK36_03795 PF07508 Recombinase NDK36_03795 PF13408 Recombinase zinc beta ribbon domain NDK36_03815 PF04634 Protein of unknown function, DUF600 NDK36_03820 PF04740 LXG domain of WXG superfamily NDK36_03830 PF18801 response regulator aspartate phosphatase H, N terminal NDK36_03830 PF13176 Tetratricopeptide repeat NDK36_03840 PF01709 Transcriptional regulator NDK36_03850 PF00440 Bacterial regulatory proteins, tetR family NDK36_03855 PF11007 Spore coat associated protein JA (CotJA) NDK36_03860 PF12652 CotJB protein NDK36_03865 PF05067 Manganese containing catalase NDK36_03870 PF00583 Acetyltransferase (GNAT) family NDK36_03880 PF04854 Protein of unknown function, DUF624 NDK36_03885 PF02743 Cache domain NDK36_03885 PF00672 HAMP domain NDK36_03885 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NDK36_03885 PF06580 Histidine kinase NDK36_03895 PF13416 Bacterial extracellular solute-binding protein NDK36_03900 PF00528 Binding-protein-dependent transport system inner membrane component NDK36_03905 PF00528 Binding-protein-dependent transport system inner membrane component NDK36_03910 PF07470 Glycosyl Hydrolase Family 88 NDK36_03915 PF12833 Helix-turn-helix domain NDK36_03920 PF13472 GDSL-like Lipase/Acylhydrolase family NDK36_03925 PF09224 Domain of unknown function (DUF1961) NDK36_03930 PF04854 Protein of unknown function, DUF624 NDK36_03935 PF18370 Rhamnogalacturonan I lyases beta-sheet domain NDK36_03940 PF18370 Rhamnogalacturonan I lyases beta-sheet domain NDK36_03940 PF01839 FG-GAP repeat NDK36_03945 PF00657 GDSL-like Lipase/Acylhydrolase NDK36_03960 PF01547 Bacterial extracellular solute-binding protein NDK36_03965 PF00528 Binding-protein-dependent transport system inner membrane component NDK36_03970 PF00528 Binding-protein-dependent transport system inner membrane component NDK36_03975 PF11975 Family 4 glycosyl hydrolase C-terminal domain NDK36_03975 PF02056 Family 4 glycosyl hydrolase NDK36_03980 PF04239 Protein of unknown function (DUF421) NDK36_03985 PF03992 Antibiotic biosynthesis monooxygenase NDK36_03990 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily NDK36_04000 PF01740 STAS domain NDK36_04005 PF10055 Uncharacterized small protein (DUF2292) NDK36_04010 PF01027 Inhibitor of apoptosis-promoting Bax1 NDK36_04025 PF00872 Transposase, Mutator family NDK36_04030 PF13037 Domain of unknown function (DUF3898) NDK36_04030 PF13039 Protein of unknown function (DUF3900) NDK36_04035 PF00667 FAD binding domain NDK36_04035 PF00258 Flavodoxin NDK36_04035 PF00175 Oxidoreductase NAD-binding domain NDK36_04035 PF00067 Cytochrome P450 NDK36_04040 PF00884 Sulfatase NDK36_04045 PF00483 Nucleotidyl transferase NDK36_04050 PF16363 GDP-mannose 4,6 dehydratase NDK36_04055 PF03407 Nucleotide-diphospho-sugar transferase NDK36_04060 PF00535 Glycosyl transferase family 2 NDK36_04065 PF03407 Nucleotide-diphospho-sugar transferase NDK36_04070 PF07690 Major Facilitator Superfamily NDK36_04075 PF13419 Haloacid dehalogenase-like hydrolase NDK36_04080 PF13520 Amino acid permease NDK36_04085 PF00171 Aldehyde dehydrogenase family NDK36_04090 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NDK36_04095 PF00005 ABC transporter NDK36_04095 PF16326 ABC transporter C-terminal domain NDK36_04095 PF12848 ABC transporter NDK36_04100 PF10787 Uncharacterised protein from bacillus cereus group NDK36_04105 PF13411 MerR HTH family regulatory protein NDK36_04110 PF07690 Major Facilitator Superfamily NDK36_04130 PF00005 ABC transporter NDK36_04130 PF12848 ABC transporter NDK36_04135 PF00270 DEAD/DEAH box helicase NDK36_04135 PF00271 Helicase conserved C-terminal domain NDK36_04145 PF00544 Pectate lyase NDK36_04150 PF00939 Sodium:sulfate symporter transmembrane region NDK36_04155 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NDK36_04155 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain NDK36_04160 PF12431 Transcriptional regulator NDK36_04160 PF00072 Response regulator receiver domain NDK36_04160 PF08279 HTH domain NDK36_04165 PF03401 Tripartite tricarboxylate transporter family receptor NDK36_04170 PF03600 Citrate transporter NDK36_04175 PF00753 Metallo-beta-lactamase superfamily NDK36_04180 PF02898 Nitric oxide synthase, oxygenase domain NDK36_04185 PF00708 Acylphosphatase NDK36_04190 PF03473 MOSC domain NDK36_04190 PF03475 3-alpha domain NDK36_04195 PF11121 Protein of unknown function (DUF2639) NDK36_04205 PF11588 Protein of unknown function (DUF3243) NDK36_04210 PF00557 Metallopeptidase family M24 NDK36_04215 PF02378 Phosphotransferase system, EIIC NDK36_04215 PF00367 phosphotransferase system, EIIB NDK36_04220 PF00884 Sulfatase NDK36_04230 PF09350 Domain of unknown function (DUF1992) NDK36_04235 PF01235 Sodium:alanine symporter family NDK36_04250 PF00367 phosphotransferase system, EIIB NDK36_04250 PF02378 Phosphotransferase system, EIIC NDK36_04255 PF16657 Maltogenic Amylase, C-terminal domain NDK36_04255 PF00128 Alpha amylase, catalytic domain NDK36_04260 PF00392 Bacterial regulatory proteins, gntR family NDK36_04260 PF07702 UTRA domain NDK36_04265 PF00881 Nitroreductase family NDK36_04270 PF02872 5'-nucleotidase, C-terminal domain NDK36_04270 PF00149 Calcineurin-like phosphoesterase NDK36_04275 PF01965 DJ-1/PfpI family NDK36_04285 PF07690 Major Facilitator Superfamily NDK36_04290 PF06569 Protein of unknown function (DUF1128) NDK36_04295 PF01451 Low molecular weight phosphotyrosine protein phosphatase NDK36_04305 PF03631 Virulence factor BrkB NDK36_04310 PF07690 Major Facilitator Superfamily NDK36_04315 PF01699 Sodium/calcium exchanger protein NDK36_04320 PF14167 YfkD-like protein NDK36_04325 PF00924 Mechanosensitive ion channel NDK36_04330 PF04055 Radical SAM superfamily NDK36_04330 PF08756 YfkB-like domain NDK36_04340 PF01522 Polysaccharide deacetylase NDK36_04345 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase NDK36_04345 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase NDK36_04350 PF01544 CorA-like Mg2+ transporter protein NDK36_04355 PF00730 HhH-GPD superfamily base excision DNA repair protein NDK36_04360 PF05958 tRNA (Uracil-5-)-methyltransferase NDK36_04360 PF01938 TRAM domain NDK36_04365 PF14118 YfzA-like protein NDK36_04370 PF01207 Dihydrouridine synthase (Dus) NDK36_04385 PF00676 Dehydrogenase E1 component NDK36_04390 PF02780 Transketolase, C-terminal domain NDK36_04390 PF02779 Transketolase, pyrimidine binding domain NDK36_04395 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) NDK36_04395 PF00364 Biotin-requiring enzyme NDK36_04395 PF02817 e3 binding domain NDK36_04400 PF07992 Pyridine nucleotide-disulphide oxidoreductase NDK36_04400 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain NDK36_04405 PF02954 Bacterial regulatory protein, Fis family NDK36_04405 PF00158 Sigma-54 interaction domain NDK36_04405 PF01590 GAF domain NDK36_04410 PF08141 Small acid-soluble spore protein H family NDK36_04415 PF02694 Uncharacterised BCR, YnfA/UPF0060 family NDK36_04420 PF17353 Family of unknown function (DUF5381) NDK36_04425 PF17353 Family of unknown function (DUF5381) NDK36_04440 PF06013 Proteins of 100 residues with WXG NDK36_04445 PF11975 Family 4 glycosyl hydrolase C-terminal domain NDK36_04445 PF02056 Family 4 glycosyl hydrolase NDK36_04450 PF01418 Helix-turn-helix domain, rpiR family NDK36_04450 PF01380 SIS domain NDK36_04455 PF02378 Phosphotransferase system, EIIC NDK36_04455 PF00367 phosphotransferase system, EIIB NDK36_04460 PF11962 Peptidase_G2, IMC autoproteolytic cleavage domain NDK36_04460 PF12708 Pectate lyase superfamily protein NDK36_04465 PF00664 ABC transporter transmembrane region NDK36_04465 PF00005 ABC transporter NDK36_04470 PF00664 ABC transporter transmembrane region NDK36_04470 PF00005 ABC transporter NDK36_04475 PF07681 DoxX NDK36_04480 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily NDK36_04485 PF12833 Helix-turn-helix domain NDK36_04485 PF02311 AraC-like ligand binding domain NDK36_04490 PF00083 Sugar (and other) transporter NDK36_04495 PF01261 Xylose isomerase-like TIM barrel NDK36_04505 PF07730 Histidine kinase NDK36_04510 PF00196 Bacterial regulatory proteins, luxR family NDK36_04510 PF00072 Response regulator receiver domain NDK36_04515 PF00005 ABC transporter NDK36_04530 PF03551 Transcriptional regulator PadR-like family NDK36_04530 PF10400 Virulence activator alpha C-term NDK36_04535 PF01674 Lipase (class 2) NDK36_04540 PF01757 Acyltransferase family NDK36_04545 PF00440 Bacterial regulatory proteins, tetR family NDK36_04545 PF17922 Tetracyclin repressor-like, C-terminal domain NDK36_04550 PF07690 Major Facilitator Superfamily NDK36_04555 PF12867 DinB superfamily NDK36_04565 PF01047 MarR family NDK36_04570 PF03706 Lysylphosphatidylglycerol synthase TM region NDK36_04570 PF09924 Uncharacterised conserved protein (DUF2156) NDK36_04575 PF01497 Periplasmic binding protein NDK36_04580 PF01032 FecCD transport family NDK36_04585 PF01032 FecCD transport family NDK36_04590 PF02567 Phenazine biosynthesis-like protein NDK36_04595 PF00881 Nitroreductase family NDK36_04600 PF14151 YfhD-like protein NDK36_04605 PF14152 YfhE-like protein NDK36_04610 PF08338 Domain of unknown function (DUF1731) NDK36_04610 PF01370 NAD dependent epimerase/dehydratase family NDK36_04615 PF02631 RecX family NDK36_04620 PF08838 Protein of unknown function (DUF1811) NDK36_04625 PF07690 Major Facilitator Superfamily NDK36_04630 PF08176 Small acid-soluble spore protein K family NDK36_04635 PF14043 WVELL protein NDK36_04640 PF08239 Bacterial SH3 domain NDK36_04645 PF13630 SdpI/YhfL protein family NDK36_04650 PF00561 alpha/beta hydrolase fold NDK36_04655 PF00535 Glycosyl transferase family 2 NDK36_04660 PF09586 Bacterial membrane protein YfhO NDK36_04665 PF04307 LexA-binding, inner membrane-associated putative hydrolase NDK36_04670 PF00730 HhH-GPD superfamily base excision DNA repair protein NDK36_04670 PF14815 NUDIX domain NDK36_04685 PF04259 Small, acid-soluble spore protein, gamma-type NDK36_04690 PF14182 YgaB-like protein NDK36_04695 PF04167 Protein of unknown function (DUF402) NDK36_04700 PF00664 ABC transporter transmembrane region NDK36_04700 PF00005 ABC transporter NDK36_04705 PF06081 Aromatic acid exporter family member 1 NDK36_04710 PF00202 Aminotransferase class-III NDK36_04715 PF00578 AhpC/TSA family NDK36_04720 PF01475 Ferric uptake regulator family NDK36_04725 PF11023 Zinc-ribbon containing domain NDK36_04730 PF14540 Nucleotidyltransferase-like NDK36_04730 PF18576 Helix-turn-helix domain NDK36_04830 PF07070 SpoOM protein NDK36_04840 PF07875 Coat F domain NDK36_04845 PF03575 Peptidase family S51 NDK36_04850 PF13667 ThiC-associated domain NDK36_04850 PF01964 Radical SAM ThiC family NDK36_04860 PF13040 Fur-regulated basic protein B NDK36_04865 PF00199 Catalase NDK36_04865 PF06628 Catalase-related immune-responsive NDK36_04870 PF00005 ABC transporter NDK36_04875 PF09084 NMT1/THI5 like NDK36_04880 PF00528 Binding-protein-dependent transport system inner membrane component NDK36_04885 PF00296 Luciferase-like monooxygenase NDK36_04895 PF00253 Ribosomal protein S14p/S29e NDK36_04905 PF01381 Helix-turn-helix NDK36_04920 PF08331 Domain of unknown function (DUF1730) NDK36_04925 PF12671 Putative amidase domain NDK36_04930 PF00588 SpoU rRNA Methylase family NDK36_04935 PF13171 Protein of unknown function (DUF4004) NDK36_04940 PF04519 Polymer-forming cytoskeletal NDK36_04950 PF06798 PrkA serine protein kinase C-terminal domain NDK36_04950 PF08298 PrkA AAA domain NDK36_04955 PF04285 Protein of unknown function (DUF444) NDK36_04960 PF01047 MarR family NDK36_04970 PF07690 Major Facilitator Superfamily NDK36_04975 PF03358 NADPH-dependent FMN reductase NDK36_04995 PF00392 Bacterial regulatory proteins, gntR family NDK36_05000 PF00005 ABC transporter NDK36_05005 PF00005 ABC transporter NDK36_05010 PF12679 ABC-2 family transporter protein NDK36_05015 PF00313 'Cold-shock' DNA-binding domain NDK36_05020 PF03180 NLPA lipoprotein NDK36_05025 PF07694 5TMR of 5TMR-LYT NDK36_05025 PF00990 Diguanylate cyclase, GGDEF domain NDK36_05030 PF00375 Sodium:dicarboxylate symporter family NDK36_05035 PF14410 HNH/ENDO VII superfamily nuclease with conserved GHE residues NDK36_05035 PF14449 Pre-toxin TG NDK36_05035 PF04740 LXG domain of WXG superfamily NDK36_05060 PF00589 Phage integrase family NDK36_05060 PF14659 Phage integrase, N-terminal SAM-like domain NDK36_05100 PF12642 Conjugative transposon protein TcpC NDK36_05110 PF12648 TcpE family NDK36_05120 PF08960 Domain of unknown function (DUF1874) NDK36_05130 PF00877 NlpC/P60 family NDK36_05140 PF14729 Domain of unknown function with cystatin-like fold (DUF4467) NDK36_05150 PF18801 response regulator aspartate phosphatase H, N terminal NDK36_05160 PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) NDK36_05170 PF02872 5'-nucleotidase, C-terminal domain NDK36_05170 PF00565 Staphylococcal nuclease homologue NDK36_05170 PF00149 Calcineurin-like phosphoesterase NDK36_05170 PF00746 LPXTG cell wall anchor motif NDK36_05175 PF04203 Sortase domain NDK36_05180 PF01479 S4 domain NDK36_05180 PF00849 RNA pseudouridylate synthase NDK36_05185 PF17326 Family of unknown function (DUF5365) NDK36_05190 PF00571 CBS domain NDK36_05195 PF13419 Haloacid dehalogenase-like hydrolase NDK36_05200 PF00795 Carbon-nitrogen hydrolase NDK36_05200 PF00583 Acetyltransferase (GNAT) family NDK36_05205 PF00202 Aminotransferase class-III NDK36_05210 PF04309 Glycerol-3-phosphate responsive antiterminator NDK36_05215 PF00230 Major intrinsic protein NDK36_05220 PF02782 FGGY family of carbohydrate kinases, C-terminal domain NDK36_05220 PF00370 FGGY family of carbohydrate kinases, N-terminal domain NDK36_05225 PF16901 C-terminal domain of alpha-glycerophosphate oxidase NDK36_05225 PF01266 FAD dependent oxidoreductase NDK36_05230 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II NDK36_05230 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I NDK36_05230 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III NDK36_05230 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain NDK36_05235 PF07730 Histidine kinase NDK36_05235 PF13185 GAF domain NDK36_05240 PF00072 Response regulator receiver domain NDK36_05240 PF00196 Bacterial regulatory proteins, luxR family NDK36_05245 PF03358 NADPH-dependent FMN reductase NDK36_05250 PF14148 YhdB-like protein NDK36_05255 PF13028 Protein of unknown function (DUF3889) NDK36_05260 PF00877 NlpC/P60 family NDK36_05260 PF01476 LysM domain NDK36_05265 PF02082 Transcriptional regulator NDK36_05270 PF05552 Conserved TM helix NDK36_05275 PF04293 SpoVR like protein NDK36_05280 PF00245 Alkaline phosphatase NDK36_05285 PF01476 LysM domain NDK36_05285 PF00877 NlpC/P60 family NDK36_05290 PF03466 LysR substrate binding domain NDK36_05290 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NDK36_05295 PF00285 Citrate synthase, C-terminal domain NDK36_05305 PF13520 Amino acid permease NDK36_05310 PF00209 Sodium:neurotransmitter symporter family NDK36_05315 PF00392 Bacterial regulatory proteins, gntR family NDK36_05315 PF00155 Aminotransferase class I and II NDK36_05320 PF00583 Acetyltransferase (GNAT) family NDK36_05325 PF17453 Sigma-M inhibitor NDK36_05330 PF13800 Sigma factor regulator N-terminal NDK36_05330 PF13791 Sigma factor regulator C-terminal NDK36_05335 PF08281 Sigma-70, region 4 NDK36_05335 PF04542 Sigma-70 region 2 NDK36_05340 PF00248 Aldo/keto reductase family NDK36_05345 PF01553 Acyltransferase NDK36_05350 PF01595 Cyclin M transmembrane N-terminal domain NDK36_05350 PF03471 Transporter associated domain NDK36_05350 PF00571 CBS domain NDK36_05355 PF13411 MerR HTH family regulatory protein NDK36_05365 PF01595 Cyclin M transmembrane N-terminal domain NDK36_05365 PF03471 Transporter associated domain NDK36_05365 PF00571 CBS domain NDK36_05370 PF02537 CrcB-like protein, Camphor Resistance (CrcB) NDK36_05375 PF02537 CrcB-like protein, Camphor Resistance (CrcB) NDK36_05380 PF03009 Glycerophosphoryl diester phosphodiesterase family NDK36_05385 PF17444 Uncharacterized YhdX-like NDK36_05390 PF00924 Mechanosensitive ion channel NDK36_05395 PF02146 Sir2 family NDK36_05400 PF01522 Polysaccharide deacetylase NDK36_05405 PF01063 Amino-transferase class IV NDK36_05410 PF03553 Na+/H+ antiporter family NDK36_05415 PF00582 Universal stress protein family NDK36_05425 PF00664 ABC transporter transmembrane region NDK36_05425 PF00005 ABC transporter NDK36_05430 PF00664 ABC transporter transmembrane region NDK36_05430 PF00005 ABC transporter NDK36_05435 PF13460 NAD(P)H-binding NDK36_05445 PF00269 Small, acid-soluble spore proteins, alpha/beta type NDK36_05455 PF17277 Family of unknown function (DUF5342) NDK36_05460 PF14398 YheC/D like ATP-grasp NDK36_05465 PF14398 YheC/D like ATP-grasp NDK36_05470 PF04286 Protein of unknown function (DUF445) NDK36_05475 PF06133 Control of competence regulator ComK, YlbF/YmcA NDK36_05490 PF04055 Radical SAM superfamily NDK36_05495 PF00999 Sodium/hydrogen exchanger family NDK36_05500 PF02080 TrkA-C domain NDK36_05510 PF00378 Enoyl-CoA hydratase/isomerase NDK36_05515 PF14120 YhzD-like protein NDK36_05520 PF00005 ABC transporter NDK36_05520 PF13732 Domain of unknown function (DUF4162) NDK36_05530 PF00149 Calcineurin-like phosphoesterase NDK36_05535 PF13514 AAA domain NDK36_05540 PF01966 HD domain NDK36_05545 PF14147 Sporulation protein YhaL NDK36_05555 PF09680 Family of unknown function NDK36_05560 PF09680 Family of unknown function NDK36_05570 PF11667 Putative zincin peptidase NDK36_05575 PF08963 Protein of unknown function (DUF1878) NDK36_05580 PF01047 MarR family NDK36_05585 PF12732 YtxH-like protein NDK36_05595 PF17099 Tryptophan transporter TrpP NDK36_05600 PF00266 Aminotransferase class-V NDK36_05605 PF01230 HIT domain NDK36_05610 PF00005 ABC transporter NDK36_05615 PF05975 Bacterial ABC transporter protein EcsB NDK36_05620 PF12787 EcsC protein family NDK36_05625 PF07687 Peptidase dimerisation domain NDK36_05625 PF01546 Peptidase family M20/M25/M40 NDK36_05640 PF03992 Antibiotic biosynthesis monooxygenase NDK36_05645 PF00912 Transglycosylase NDK36_05645 PF00905 Penicillin binding protein transpeptidase domain NDK36_05650 PF01208 Uroporphyrinogen decarboxylase (URO-D) NDK36_05655 PF00762 Ferrochelatase NDK36_05660 PF01593 Flavin containing amine oxidoreductase NDK36_05665 PF17932 Tetracyclin repressor-like, C-terminal domain NDK36_05665 PF00440 Bacterial regulatory proteins, tetR family NDK36_05675 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III NDK36_05675 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal NDK36_05680 PF10086 YhfC intramembrane metalloprotease NDK36_05690 PF05343 M42 glutamyl aminopeptidase NDK36_05695 PF04266 ASCH domain NDK36_05700 PF00375 Sodium:dicarboxylate symporter family NDK36_05705 PF14149 YhfH-like protein NDK36_05710 PF12706 Beta-lactamase superfamily domain NDK36_05715 PF10437 Bacterial lipoate protein ligase C-terminus NDK36_05715 PF03099 Biotin/lipoate A/B protein ligase family NDK36_05720 PF13460 NAD(P)H-binding NDK36_05725 PF13193 AMP-binding enzyme C-terminal domain NDK36_05725 PF00501 AMP-binding enzyme NDK36_05735 PF16491 CAAX prenyl protease N-terminal, five membrane helices NDK36_05735 PF01435 Peptidase family M48 NDK36_05740 PF05922 Peptidase inhibitor I9 NDK36_05740 PF00082 Subtilase family NDK36_05745 PF00583 Acetyltransferase (GNAT) family NDK36_05750 PF08240 Alcohol dehydrogenase GroES-like domain NDK36_05750 PF00107 Zinc-binding dehydrogenase NDK36_05755 PF01497 Periplasmic binding protein NDK36_05760 PF00300 Histidine phosphatase superfamily (branch 1) NDK36_05765 PF02803 Thiolase, C-terminal domain NDK36_05765 PF00108 Thiolase, N-terminal domain NDK36_05770 PF00501 AMP-binding enzyme NDK36_05770 PF13193 AMP-binding enzyme C-terminal domain NDK36_05775 PF02632 BioY family NDK36_05780 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NDK36_05795 PF08858 IDEAL domain NDK36_05800 PF06338 ComK protein NDK36_05810 PF05901 Excalibur calcium-binding domain NDK36_05815 PF00474 Sodium:solute symporter family NDK36_05820 PF11755 Protein of unknown function (DUF3311) NDK36_05830 PF09335 SNARE associated Golgi protein NDK36_05835 PF10502 Signal peptidase, peptidase S26 NDK36_05840 PF01494 FAD binding domain NDK36_05845 PF01047 MarR family NDK36_05855 PF07690 Major Facilitator Superfamily NDK36_05860 PF01408 Oxidoreductase family, NAD-binding Rossmann fold NDK36_05860 PF02894 Oxidoreductase family, C-terminal alpha/beta domain NDK36_05865 PF05116 Sucrose-6F-phosphate phosphohydrolase NDK36_05870 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family NDK36_05875 PF00356 Bacterial regulatory proteins, lacI family NDK36_05880 PF05145 Transition state regulatory protein AbrB NDK36_05885 PF07690 Major Facilitator Superfamily NDK36_05890 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle NDK36_05890 PF12793 Sugar transport-related sRNA regulator N-term NDK36_05905 PF03860 Domain of Unknown Function (DUF326) NDK36_05910 PF02915 Rubrerythrin NDK36_05915 PF12705 PD-(D/E)XK nuclease superfamily NDK36_05915 PF13361 UvrD-like helicase C-terminal domain NDK36_05920 PF12705 PD-(D/E)XK nuclease superfamily NDK36_05920 PF13361 UvrD-like helicase C-terminal domain NDK36_05920 PF00580 UvrD/REP helicase N-terminal domain NDK36_05925 PF00149 Calcineurin-like phosphoesterase NDK36_05925 PF12320 Type 5 capsule protein repressor C-terminal domain NDK36_05930 PF13476 AAA domain NDK36_05940 PF10676 Spore germination protein gerPA/gerPF NDK36_05945 PF10970 Spore germination protein GerPE NDK36_05955 PF10737 Spore germination protein GerPC NDK36_05960 PF10803 Spore germination GerPB NDK36_05965 PF10676 Spore germination protein gerPA/gerPF NDK36_05970 PF09388 Spo0E like sporulation regulatory protein NDK36_05975 PF08757 CotH kinase protein NDK36_05980 PF01557 Fumarylacetoacetate (FAA) hydrolase family NDK36_05985 PF07457 Protein of unknown function (DUF1516) NDK36_05990 PF17936 Bacterial Ig domain NDK36_05990 PF00082 Subtilase family NDK36_05995 PF10949 Protein of unknown function (DUF2777) NDK36_06000 PF00733 Asparagine synthase NDK36_06000 PF13537 Glutamine amidotransferase domain NDK36_06010 PF01554 MatE NDK36_06015 PF12833 Helix-turn-helix domain NDK36_06015 PF02311 AraC-like ligand binding domain NDK36_06020 PF00356 Bacterial regulatory proteins, lacI family NDK36_06025 PF01408 Oxidoreductase family, NAD-binding Rossmann fold NDK36_06025 PF02894 Oxidoreductase family, C-terminal alpha/beta domain NDK36_06030 PF05163 DinB family NDK36_06035 PF01810 LysE type translocator NDK36_06040 PF00392 Bacterial regulatory proteins, gntR family NDK36_06040 PF00155 Aminotransferase class I and II NDK36_06045 PF13599 Pentapeptide repeats (9 copies) NDK36_06050 PF00561 alpha/beta hydrolase fold NDK36_06050 PF08386 TAP-like protein NDK36_06060 PF13673 Acetyltransferase (GNAT) domain NDK36_06065 PF02219 Methylenetetrahydrofolate reductase NDK36_06065 PF02574 Homocysteine S-methyltransferase NDK36_06070 PF04461 Protein of unknown function (DUF520) NDK36_06080 PF12650 Domain of unknown function (DUF3784) NDK36_06085 PF02645 Uncharacterised protein, DegV family COG1307 NDK36_06090 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) NDK36_06090 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 NDK36_06095 PF12690 Intracellular proteinase inhibitor NDK36_06100 PF12758 Protein of unknown function (DUF3813) NDK36_06115 PF00326 Prolyl oligopeptidase family NDK36_06120 PF01883 Iron-sulfur cluster assembly protein NDK36_06130 PF01565 FAD binding domain NDK36_06140 PF01118 Semialdehyde dehydrogenase, NAD binding domain NDK36_06140 PF02774 Semialdehyde dehydrogenase, dimerisation domain NDK36_06145 PF01960 ArgJ family NDK36_06150 PF00696 Amino acid kinase family NDK36_06155 PF00202 Aminotransferase class-III NDK36_06160 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain NDK36_06160 PF00117 Glutamine amidotransferase class-I NDK36_06165 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain NDK36_06165 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain NDK36_06170 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain NDK36_06170 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain NDK36_06180 PF14168 YjzC-like protein NDK36_06185 PF11151 Protein of unknown function (DUF2929) NDK36_06200 PF02608 ABC transporter substrate-binding protein PnrA-like NDK36_06205 PF10815 ComZ NDK36_06215 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III NDK36_06215 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal NDK36_06220 PF00109 Beta-ketoacyl synthase, N-terminal domain NDK36_06220 PF02801 Beta-ketoacyl synthase, C-terminal domain NDK36_06225 PF10026 Predicted Zn-dependent protease (DUF2268) NDK36_06230 PF00005 ABC transporter NDK36_06230 PF08352 Oligopeptide/dipeptide transporter, C-terminal region NDK36_06235 PF08352 Oligopeptide/dipeptide transporter, C-terminal region NDK36_06235 PF00005 ABC transporter NDK36_06240 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle NDK36_06245 PF00528 Binding-protein-dependent transport system inner membrane component NDK36_06250 PF00528 Binding-protein-dependent transport system inner membrane component NDK36_06250 PF12911 N-terminal TM domain of oligopeptide transport permease C NDK36_06255 PF12227 Protein of unknown function (DUF3603) NDK36_06260 PF00579 tRNA synthetases class I (W and Y) NDK36_06265 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle NDK36_06270 PF00528 Binding-protein-dependent transport system inner membrane component NDK36_06275 PF00528 Binding-protein-dependent transport system inner membrane component NDK36_06275 PF12911 N-terminal TM domain of oligopeptide transport permease C NDK36_06280 PF00005 ABC transporter NDK36_06280 PF08352 Oligopeptide/dipeptide transporter, C-terminal region NDK36_06285 PF08352 Oligopeptide/dipeptide transporter, C-terminal region NDK36_06285 PF00005 ABC transporter NDK36_06290 PF07690 Major Facilitator Superfamily NDK36_06295 PF13508 Acetyltransferase (GNAT) domain NDK36_06300 PF03960 ArsC family NDK36_06305 PF03741 Integral membrane protein TerC family NDK36_06315 PF05389 Negative regulator of genetic competence (MecA) NDK36_06325 PF06054 Competence protein CoiA-like family NDK36_06330 PF01432 Peptidase family M3 NDK36_06330 PF08439 Oligopeptidase F NDK36_06345 PF01152 Bacterial-like globin NDK36_06350 PF01464 Transglycosylase SLT domain NDK36_06355 PF01928 CYTH domain NDK36_06365 PF04607 Region found in RelA / SpoT proteins NDK36_06370 PF01513 ATP-NAD kinase NDK36_06375 PF00849 RNA pseudouridylate synthase NDK36_06380 PF00149 Calcineurin-like phosphoesterase NDK36_06385 PF02080 TrkA-C domain NDK36_06385 PF02254 TrkA-N domain NDK36_06385 PF00999 Sodium/hydrogen exchanger family NDK36_06390 PF03070 TENA/THI-4/PQQC family NDK36_06395 PF02581 Thiamine monophosphate synthase NDK36_06400 PF01266 FAD dependent oxidoreductase NDK36_06405 PF02597 ThiS family NDK36_06410 PF05690 Thiazole biosynthesis protein ThiG NDK36_06415 PF00899 ThiF family NDK36_06420 PF08543 Phosphomethylpyrimidine kinase NDK36_06430 PF14153 Spore coat protein CotO NDK36_06435 PF10612 Spore coat protein Z NDK36_06440 PF10612 Spore coat protein Z NDK36_06445 PF07552 Spore Coat Protein X and V domain NDK36_06460 PF07098 Protein of unknown function (DUF1360) NDK36_06475 PF14069 Stage VI sporulation protein F NDK36_06480 PF00580 UvrD/REP helicase N-terminal domain NDK36_06480 PF13361 UvrD-like helicase C-terminal domain NDK36_06490 PF13673 Acetyltransferase (GNAT) domain NDK36_06500 PF00756 Putative esterase NDK36_06505 PF01053 Cys/Met metabolism PLP-dependent enzyme NDK36_06510 PF01053 Cys/Met metabolism PLP-dependent enzyme NDK36_06515 PF13302 Acetyltransferase (GNAT) domain NDK36_06520 PF05684 Protein of unknown function (DUF819) NDK36_06560 PF01381 Helix-turn-helix NDK36_06600 PF00534 Glycosyl transferases group 1 NDK36_06645 PF18801 response regulator aspartate phosphatase H, N terminal NDK36_06650 PF14411 A nuclease of the HNH/ENDO VII superfamily with conserved LHH NDK36_06650 PF04740 LXG domain of WXG superfamily NDK36_06660 PF00872 Transposase, Mutator family NDK36_06670 PF17247 Family of unknown function (DUF5316) NDK36_06720 PF03992 Antibiotic biosynthesis monooxygenase NDK36_06730 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 NDK36_06730 PF00874 PRD domain NDK36_06730 PF05043 Mga helix-turn-helix domain NDK36_06730 PF08279 HTH domain NDK36_06735 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit NDK36_06735 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 NDK36_06735 PF02378 Phosphotransferase system, EIIC NDK36_06740 PF01238 Phosphomannose isomerase type I NDK36_06745 PF11208 Protein of unknown function (DUF2992) NDK36_06755 PF13302 Acetyltransferase (GNAT) domain NDK36_06765 PF04073 Aminoacyl-tRNA editing domain NDK36_06770 PF13783 Domain of unknown function (DUF4177) NDK36_06775 PF14154 Domain of unknown function (DUF4306) NDK36_06780 PF01040 UbiA prenyltransferase family NDK36_06790 PF11738 Protein of unknown function (DUF3298) NDK36_06790 PF01522 Polysaccharide deacetylase NDK36_06790 PF13739 Deacetylase PdaC NDK36_06795 PF10901 Protein of unknown function (DUF2690) NDK36_06800 PF14070 Putative motility protein NDK36_06805 PF10026 Predicted Zn-dependent protease (DUF2268) NDK36_06810 PF10990 Protein of unknown function (DUF2809) NDK36_06815 PF14172 Domain of unknown function (DUF4309) NDK36_06825 PF07849 Protein of unknown function (DUF1641) NDK36_06830 PF11611 Domain of unknown function (DUF4352) NDK36_06835 PF00293 NUDIX domain NDK36_06845 PF00067 Cytochrome P450 NDK36_06850 PF04101 Glycosyltransferase family 28 C-terminal domain NDK36_06860 PF02602 Uroporphyrinogen-III synthase HemD NDK36_06865 PF03649 Uncharacterised protein family (UPF0014) NDK36_06870 PF00005 ABC transporter NDK36_06875 PF13536 Putative multidrug resistance efflux transporter NDK36_06885 PF07849 Protein of unknown function (DUF1641) NDK36_06890 PF07992 Pyridine nucleotide-disulphide oxidoreductase NDK36_06895 PF02614 Glucuronate isomerase NDK36_06905 PF02615 Malate/L-lactate dehydrogenase NDK36_06910 PF08240 Alcohol dehydrogenase GroES-like domain NDK36_06910 PF00107 Zinc-binding dehydrogenase NDK36_06915 PF03786 D-mannonate dehydratase (UxuA) NDK36_06920 PF00106 short chain dehydrogenase NDK36_06925 PF07690 Major Facilitator Superfamily NDK36_06930 PF00356 Bacterial regulatory proteins, lacI family NDK36_06935 PF08125 Mannitol dehydrogenase C-terminal domain NDK36_06935 PF01232 Mannitol dehydrogenase Rossmann domain NDK36_06940 PF08666 SAF domain NDK36_06940 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus NDK36_06945 PF01925 Sulfite exporter TauE/SafE NDK36_06950 PF05163 DinB family NDK36_06970 PF18801 response regulator aspartate phosphatase H, N terminal NDK36_06985 PF01471 Putative peptidoglycan binding domain NDK36_06985 PF01476 LysM domain NDK36_06985 PF01510 N-acetylmuramoyl-L-alanine amidase NDK36_06990 PF08000 Bacterial PH domain NDK36_06995 PF05908 Poly-gamma-glutamate hydrolase NDK36_07000 PF05067 Manganese containing catalase NDK36_07005 PF06114 IrrE N-terminal-like domain NDK36_07010 PF01381 Helix-turn-helix NDK36_07025 PF01695 IstB-like ATP binding protein NDK36_07040 PF17356 Phage-like element PBSX protein XtrA NDK36_07045 PF08281 Sigma-70, region 4 NDK36_07050 PF03592 Terminase small subunit NDK36_07050 PF10668 Phage terminase small subunit NDK36_07055 PF17288 Terminase RNAseH like domain NDK36_07055 PF04466 Phage terminase large subunit NDK36_07060 PF04860 Phage portal protein NDK36_07065 PF14550 Putative phage serine protease XkdF NDK36_07070 PF05065 Phage capsid family NDK36_07075 PF11436 Protein of unknown function (DUF3199) NDK36_07080 PF12206 Domain of unknown function (DUF3599) NDK36_07085 PF04883 Bacteriophage HK97-gp10, putative tail-component NDK36_07100 PF17481 Phage tail sheath protein beta-sandwich domain NDK36_07100 PF17482 Phage tail sheath C-terminal domain NDK36_07100 PF04984 Phage tail sheath protein subtilisin-like domain NDK36_07105 PF09393 Phage tail tube protein NDK36_07110 PF08890 Phage XkdN-like tail assembly chaperone protein, TAC NDK36_07120 PF01464 Transglycosylase SLT domain NDK36_07120 PF01464 Transglycosylase SLT domain NDK36_07120 PF01464 Transglycosylase SLT domain NDK36_07125 PF01476 LysM domain NDK36_07135 PF10844 Protein of unknown function (DUF2577) NDK36_07140 PF10934 Protein of unknown function (DUF2634) NDK36_07145 PF04865 Baseplate J-like protein NDK36_07150 PF10076 Uncharacterised protein conserved in bacteria (DUF2313) NDK36_07165 PF09636 XkdW protein NDK36_07170 PF09693 Phage uncharacterised protein (Phage_XkdX) NDK36_07180 PF10779 Haemolysin XhlA NDK36_07185 PF04688 SPP1 phage holin NDK36_07190 PF01510 N-acetylmuramoyl-L-alanine amidase NDK36_07190 PF01476 LysM domain NDK36_07190 PF01471 Putative peptidoglycan binding domain NDK36_07200 PF14185 Antitoxin SpoIISB, type II toxin-antitoxin system NDK36_07205 PF14171 Toxin SpoIISA, type II toxin-antitoxin system NDK36_07210 PF01384 Phosphate transporter family NDK36_07215 PF01865 Protein of unknown function DUF47 NDK36_07220 PF13520 Amino acid permease NDK36_07225 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily NDK36_07235 PF13231 Dolichyl-phosphate-mannose-protein mannosyltransferase NDK36_07240 PF00535 Glycosyl transferase family 2 NDK36_07245 PF13180 PDZ domain NDK36_07250 PF03807 NADP oxidoreductase coenzyme F420-dependent NDK36_07250 PF14748 Pyrroline-5-carboxylate reductase dimerisation NDK36_07255 PF04951 D-aminopeptidase NDK36_07260 PF00528 Binding-protein-dependent transport system inner membrane component NDK36_07265 PF00528 Binding-protein-dependent transport system inner membrane component NDK36_07265 PF12911 N-terminal TM domain of oligopeptide transport permease C NDK36_07270 PF08352 Oligopeptide/dipeptide transporter, C-terminal region NDK36_07270 PF00005 ABC transporter NDK36_07275 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle NDK36_07280 PF02016 LD-carboxypeptidase N-terminal domain NDK36_07280 PF17676 LD-carboxypeptidase C-terminal domain NDK36_07285 PF13378 Enolase C-terminal domain-like NDK36_07285 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain NDK36_07290 PF00877 NlpC/P60 family NDK36_07295 PF00005 ABC transporter NDK36_07295 PF08352 Oligopeptide/dipeptide transporter, C-terminal region NDK36_07300 PF10282 Lactonase, 7-bladed beta-propeller NDK36_07310 PF03061 Thioesterase superfamily NDK36_07315 PF00042 Globin NDK36_07315 PF00175 Oxidoreductase NAD-binding domain NDK36_07315 PF00970 Oxidoreductase FAD-binding domain NDK36_07325 PF04239 Protein of unknown function (DUF421) NDK36_07330 PF12867 DinB superfamily NDK36_07335 PF13302 Acetyltransferase (GNAT) domain NDK36_07340 PF00893 Small Multidrug Resistance protein NDK36_07345 PF00893 Small Multidrug Resistance protein NDK36_07350 PF01842 ACT domain NDK36_07350 PF00551 Formyl transferase NDK36_07355 PF00696 Amino acid kinase family NDK36_07355 PF01472 PUA domain NDK36_07360 PF00171 Aldehyde dehydrogenase family NDK36_07365 PF02566 OsmC-like protein NDK36_07370 PF01047 MarR family NDK36_07375 PF02566 OsmC-like protein NDK36_07385 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region NDK36_07390 PF08267 Cobalamin-independent synthase, N-terminal domain NDK36_07390 PF01717 Cobalamin-independent synthase, Catalytic domain NDK36_07395 PF00082 Subtilase family NDK36_07400 PF01740 STAS domain NDK36_07405 PF02361 Cobalt transport protein NDK36_07410 PF00005 ABC transporter NDK36_07415 PF09819 ABC-type cobalt transport system, permease component NDK36_07420 PF07615 YKOF-related Family NDK36_07425 PF00486 Transcriptional regulatory protein, C terminal NDK36_07425 PF00072 Response regulator receiver domain NDK36_07430 PF00512 His Kinase A (phospho-acceptor) domain NDK36_07430 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NDK36_07430 PF00672 HAMP domain NDK36_07435 PF03413 Peptidase propeptide and YPEB domain NDK36_07440 PF03413 Peptidase propeptide and YPEB domain NDK36_07445 PF11132 Transcriptional regulator protein (SplA) NDK36_07450 PF00571 CBS domain NDK36_07450 PF03448 MgtE intracellular N domain NDK36_07450 PF01769 Divalent cation transporter NDK36_07455 PF13411 MerR HTH family regulatory protein NDK36_07470 PF01047 MarR family NDK36_07475 PF06925 Monogalactosyldiacylglycerol (MGDG) synthase NDK36_07485 PF00149 Calcineurin-like phosphoesterase NDK36_07495 PF00535 Glycosyl transferase family 2 NDK36_07500 PF01068 ATP dependent DNA ligase domain NDK36_07505 PF02735 Ku70/Ku80 beta-barrel domain NDK36_07510 PF00563 EAL domain NDK36_07510 PF03707 Bacterial signalling protein N terminal repeat NDK36_07510 PF00990 Diguanylate cyclase, GGDEF domain NDK36_07515 PF09335 SNARE associated Golgi protein NDK36_07520 PF03741 Integral membrane protein TerC family NDK36_07525 PF04542 Sigma-70 region 2 NDK36_07530 PF12791 Anti-sigma factor N-terminus NDK36_07535 PF00269 Small, acid-soluble spore proteins, alpha/beta type NDK36_07540 PF08876 Domain of unknown function (DUF1836) NDK36_07545 PF01435 Peptidase family M48 NDK36_07550 PF02386 Cation transport protein NDK36_07570 PF01757 Acyltransferase family NDK36_07575 PF13426 PAS domain NDK36_07575 PF13188 PAS domain NDK36_07575 PF00989 PAS fold NDK36_07575 PF00512 His Kinase A (phospho-acceptor) domain NDK36_07575 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NDK36_07580 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain NDK36_07580 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain NDK36_07590 PF01008 Initiation factor 2 subunit family NDK36_07595 PF01636 Phosphotransferase enzyme family NDK36_07600 PF00795 Carbon-nitrogen hydrolase NDK36_07605 PF00155 Aminotransferase class I and II NDK36_07610 PF00016 Ribulose bisphosphate carboxylase large chain, catalytic domain NDK36_07610 PF02788 Ribulose bisphosphate carboxylase large chain, N-terminal domain NDK36_07620 PF00596 Class II Aldolase and Adducin N-terminal domain NDK36_07625 PF03079 ARD/ARD' family NDK36_07630 PF06803 Protein of unknown function (DUF1232) NDK36_07635 PF09388 Spo0E like sporulation regulatory protein NDK36_07645 PF02743 Cache domain NDK36_07645 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NDK36_07645 PF00512 His Kinase A (phospho-acceptor) domain NDK36_07650 PF01047 MarR family NDK36_07655 PF13677 Membrane MotB of proton-channel complex MotA/MotB NDK36_07655 PF00691 OmpA family NDK36_07660 PF01618 MotA/TolQ/ExbB proton channel family NDK36_07665 PF17871 AAA lid domain NDK36_07665 PF10431 C-terminal, D2-small domain, of ClpB protein NDK36_07665 PF00004 ATPase family associated with various cellular activities (AAA) NDK36_07665 PF07724 AAA domain (Cdc48 subfamily) NDK36_07675 PF06508 Queuosine biosynthesis protein QueC NDK36_07680 PF01242 6-pyruvoyl tetrahydropterin synthase NDK36_07685 PF04055 Radical SAM superfamily NDK36_07690 PF14489 QueF-like protein NDK36_07695 PF11514 Protein of unknown function (DUF3219) NDK36_07700 PF09953 Uncharacterized protein conserved in bacteria (DUF2187) NDK36_07710 PF07486 Cell Wall Hydrolase NDK36_07715 PF01943 Polysaccharide biosynthesis protein NDK36_07720 PF00578 AhpC/TSA family NDK36_07735 PF01321 Creatinase/Prolidase N-terminal domain NDK36_07735 PF00557 Metallopeptidase family M24 NDK36_07740 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family NDK36_07740 PF00356 Bacterial regulatory proteins, lacI family NDK36_07745 PF00874 PRD domain NDK36_07745 PF03123 CAT RNA binding domain NDK36_07750 PF00367 phosphotransferase system, EIIB NDK36_07750 PF02378 Phosphotransferase system, EIIC NDK36_07750 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 NDK36_07755 PF00381 PTS HPr component phosphorylation site NDK36_07760 PF05524 PEP-utilising enzyme, N-terminal NDK36_07760 PF00391 PEP-utilising enzyme, mobile domain NDK36_07760 PF02896 PEP-utilising enzyme, TIM barrel domain NDK36_07765 PF11132 Transcriptional regulator protein (SplA) NDK36_07775 PF00583 Acetyltransferase (GNAT) family NDK36_07780 PF02743 Cache domain NDK36_07780 PF00672 HAMP domain NDK36_07780 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NDK36_07785 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase NDK36_07785 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase NDK36_07795 PF00872 Transposase, Mutator family NDK36_07805 PF00905 Penicillin binding protein transpeptidase domain NDK36_07805 PF03717 Penicillin-binding Protein dimerisation domain NDK36_07810 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NDK36_07810 PF00512 His Kinase A (phospho-acceptor) domain NDK36_07810 PF00989 PAS fold NDK36_07810 PF08447 PAS fold NDK36_07815 PF00155 Aminotransferase class I and II NDK36_07825 PF01584 CheW-like domain NDK36_07825 PF00072 Response regulator receiver domain NDK36_07830 PF14177 YkyB-like protein NDK36_07835 PF07690 Major Facilitator Superfamily NDK36_07840 PF03734 L,D-transpeptidase catalytic domain NDK36_07840 PF01476 LysM domain NDK36_07845 PF00149 Calcineurin-like phosphoesterase NDK36_07845 PF10518 TAT (twin-arginine translocation) pathway signal sequence NDK36_07855 PF00563 EAL domain NDK36_07855 PF10388 EAL-domain associated signalling protein domain NDK36_07860 PF08796 Protein of unknown function (DUF1797) NDK36_07865 PF04308 Ribonuclease H-like NDK36_07870 PF14156 Antirepressor AbbA NDK36_07880 PF03466 LysR substrate binding domain NDK36_07880 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NDK36_07885 PF00258 Flavodoxin NDK36_07895 PF00258 Flavodoxin NDK36_07900 PF08503 Tetrahydrodipicolinate succinyltransferase N-terminal NDK36_07900 PF00132 Bacterial transferase hexapeptide (six repeats) NDK36_07900 PF14602 Hexapeptide repeat of succinyl-transferase NDK36_07905 PF07687 Peptidase dimerisation domain NDK36_07905 PF01546 Peptidase family M20/M25/M40 NDK36_07910 PF03698 Uncharacterised protein family (UPF0180) NDK36_07915 PF00924 Mechanosensitive ion channel NDK36_07920 PF10417 C-terminal domain of 1-Cys peroxiredoxin NDK36_07920 PF00578 AhpC/TSA family NDK36_07925 PF00578 AhpC/TSA family NDK36_07945 PF12804 MobA-like NTP transferase domain NDK36_07950 PF00899 ThiF family NDK36_07955 PF00994 Probable molybdopterin binding domain NDK36_07955 PF03454 MoeA C-terminal region (domain IV) NDK36_07955 PF03453 MoeA N-terminal region (domain I and II) NDK36_07960 PF03205 Molybdopterin guanine dinucleotide synthesis protein B NDK36_07965 PF02391 MoaE protein NDK36_07970 PF02597 ThiS family NDK36_07980 PF00664 ABC transporter transmembrane region NDK36_07980 PF00005 ABC transporter NDK36_07985 PF04893 Yip1 domain NDK36_07990 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion NDK36_07995 PF00005 ABC transporter NDK36_08000 PF02687 FtsX-like permease family NDK36_08000 PF12704 MacB-like periplasmic core domain NDK36_08005 PF00455 DeoR C terminal sensor domain NDK36_08005 PF08220 DeoR-like helix-turn-helix domain NDK36_08010 PF00294 pfkB family carbohydrate kinase NDK36_08015 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 NDK36_08015 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit NDK36_08020 PF10502 Signal peptidase, peptidase S26 NDK36_08030 PF00005 ABC transporter NDK36_08030 PF12848 ABC transporter NDK36_08035 PF02558 Ketopantoate reductase PanE/ApbA NDK36_08035 PF08546 Ketopantoate reductase PanE/ApbA C terminal NDK36_08040 PF02073 Thermophilic metalloprotease (M29) NDK36_08045 PF17447 Uncharacterized YkpC-like NDK36_08055 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin NDK36_08055 PF18277 AbrB C-terminal domain NDK36_08060 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NDK36_08060 PF00512 His Kinase A (phospho-acceptor) domain NDK36_08060 PF00989 PAS fold NDK36_08065 PF06094 Gamma-glutamyl cyclotransferase, AIG2-like NDK36_08070 PF02080 TrkA-C domain NDK36_08070 PF02254 TrkA-N domain NDK36_08075 PF13382 Adenine deaminase C-terminal domain NDK36_08075 PF01979 Amidohydrolase family NDK36_08080 PF00753 Metallo-beta-lactamase superfamily NDK36_08080 PF17770 Ribonuclease J C-terminal domain NDK36_08080 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain NDK36_08085 PF07288 Protein of unknown function (DUF1447) NDK36_08095 PF01327 Polypeptide deformylase NDK36_08110 PF00676 Dehydrogenase E1 component NDK36_08115 PF02779 Transketolase, pyrimidine binding domain NDK36_08115 PF02780 Transketolase, C-terminal domain NDK36_08120 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) NDK36_08120 PF00364 Biotin-requiring enzyme NDK36_08120 PF02817 e3 binding domain NDK36_08125 PF07992 Pyridine nucleotide-disulphide oxidoreductase NDK36_08125 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain NDK36_08135 PF13790 SR1 protein NDK36_08140 PF01276 Orn/Lys/Arg decarboxylase, major domain NDK36_08140 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain NDK36_08145 PF05256 Uncharacterised protein family (UPF0223) NDK36_08150 PF06335 Protein of unknown function (DUF1054) NDK36_08160 PF00459 Inositol monophosphatase family NDK36_08165 PF00583 Acetyltransferase (GNAT) family NDK36_08170 PF01609 Transposase DDE domain NDK36_08175 PF04072 Leucine carboxyl methyltransferase NDK36_08180 PF07504 Fungalysin/Thermolysin Propeptide Motif NDK36_08180 PF03413 Peptidase propeptide and YPEB domain NDK36_08180 PF01447 Thermolysin metallopeptidase, catalytic domain NDK36_08180 PF02868 Thermolysin metallopeptidase, alpha-helical domain NDK36_08200 PF13490 Putative zinc-finger NDK36_08210 PF17259 Family of unknown function (DUF5325) NDK36_08215 PF14492 Elongation Factor G, domain II NDK36_08215 PF00009 Elongation factor Tu GTP binding domain NDK36_08215 PF03144 Elongation factor Tu domain 2 NDK36_08215 PF00679 Elongation factor G C-terminus NDK36_08220 PF14036 YlaH-like protein NDK36_08225 PF09963 Uncharacterized protein conserved in bacteria (DUF2197) NDK36_08230 PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) NDK36_08235 PF13638 PIN domain NDK36_08235 PF02562 PhoH-like protein NDK36_08245 PF04960 Glutaminase NDK36_08250 PF07408 Protein of unknown function (DUF1507) NDK36_08255 PF01098 Cell cycle protein NDK36_08260 PF00289 Biotin carboxylase, N-terminal domain NDK36_08260 PF00364 Biotin-requiring enzyme NDK36_08260 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain NDK36_08260 PF00682 HMGL-like NDK36_08260 PF02436 Conserved carboxylase domain NDK36_08260 PF02785 Biotin carboxylase C-terminal domain NDK36_08265 PF02628 Cytochrome oxidase assembly protein NDK36_08270 PF01040 UbiA prenyltransferase family NDK36_08275 PF00116 Cytochrome C oxidase subunit II, periplasmic domain NDK36_08275 PF02790 Cytochrome C oxidase subunit II, transmembrane domain NDK36_08275 PF00034 Cytochrome c NDK36_08280 PF00115 Cytochrome C and Quinol oxidase polypeptide I NDK36_08285 PF00510 Cytochrome c oxidase subunit III NDK36_08290 PF03626 Prokaryotic Cytochrome C oxidase subunit IV NDK36_08295 PF09678 Cytochrome c oxidase caa3 assembly factor (Caa3_CtaG) NDK36_08300 PF08868 YugN-like family NDK36_08305 PF00571 CBS domain NDK36_08310 PF00188 Cysteine-rich secretory protein family NDK36_08310 PF14504 CAP-associated N-terminal NDK36_08315 PF14071 Putative coat protein NDK36_08320 PF14003 YlbE-like protein NDK36_08325 PF06133 Control of competence regulator ComK, YlbF/YmcA NDK36_08330 PF09902 Uncharacterized protein conserved in bacteria (DUF2129) NDK36_08340 PF01467 Cytidylyltransferase-like NDK36_08345 PF07670 Nucleoside recognition NDK36_08350 PF01734 Patatin-like phospholipase NDK36_08355 PF05362 Lon protease (S16) C-terminal proteolytic domain NDK36_08355 PF13180 PDZ domain NDK36_08360 PF05636 HIGH Nucleotidyl Transferase NDK36_08370 PF02620 Large ribosomal RNA subunit accumulation protein YceD NDK36_08375 PF01783 Ribosomal L32p protein family NDK36_08385 PF00583 Acetyltransferase (GNAT) family NDK36_08390 PF02558 Ketopantoate reductase PanE/ApbA NDK36_08390 PF08546 Ketopantoate reductase PanE/ApbA C terminal NDK36_08395 PF10079 Bacillithiol biosynthesis BshC NDK36_08400 PF02381 MraZ protein, putative antitoxin-like NDK36_08405 PF01795 MraW methylase family NDK36_08415 PF03793 PASTA domain NDK36_08415 PF03717 Penicillin-binding Protein dimerisation domain NDK36_08415 PF00905 Penicillin binding protein transpeptidase domain NDK36_08420 PF03793 PASTA domain NDK36_08420 PF03717 Penicillin-binding Protein dimerisation domain NDK36_08420 PF00905 Penicillin binding protein transpeptidase domain NDK36_08425 PF02875 Mur ligase family, glutamate ligase domain NDK36_08425 PF08245 Mur ligase middle domain NDK36_08425 PF01225 Mur ligase family, catalytic domain NDK36_08430 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 NDK36_08430 PF00953 Glycosyl transferase family 4 NDK36_08435 PF02875 Mur ligase family, glutamate ligase domain NDK36_08435 PF08245 Mur ligase middle domain NDK36_08440 PF01098 Cell cycle protein NDK36_08445 PF04101 Glycosyltransferase family 28 C-terminal domain NDK36_08445 PF03033 Glycosyltransferase family 28 N-terminal domain NDK36_08450 PF01565 FAD binding domain NDK36_08450 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain NDK36_08455 PF08478 POTRA domain, FtsQ-type NDK36_08460 PF05949 Bacterial protein of unknown function (DUF881) NDK36_08465 PF05949 Bacterial protein of unknown function (DUF881) NDK36_08470 PF06947 Protein of unknown function (DUF1290) NDK36_08475 PF02491 SHS2 domain inserted in FTSA NDK36_08480 PF12327 FtsZ family, C-terminal domain NDK36_08480 PF00091 Tubulin/FtsZ family, GTPase domain NDK36_08485 PF00082 Subtilase family NDK36_08485 PF05922 Peptidase inhibitor I9 NDK36_08490 PF03419 Sporulation factor SpoIIGA NDK36_08495 PF04542 Sigma-70 region 2 NDK36_08495 PF04545 Sigma-70, region 4 NDK36_08500 PF04539 Sigma-70 region 3 NDK36_08500 PF04545 Sigma-70, region 4 NDK36_08500 PF04542 Sigma-70 region 2 NDK36_08505 PF00005 ABC transporter NDK36_08510 PF07687 Peptidase dimerisation domain NDK36_08510 PF01546 Peptidase family M20/M25/M40 NDK36_08515 PF05239 PRC-barrel domain NDK36_08520 PF02578 Multi-copper polyphenol oxidoreductase laccase NDK36_08525 PF01168 Alanine racemase, N-terminal domain NDK36_08530 PF04472 Cell division protein SepF NDK36_08535 PF02325 YGGT family NDK36_08540 PF01479 S4 domain NDK36_08540 PF17774 Putative RNA-binding domain in YlmH NDK36_08545 PF05103 DivIVA protein NDK36_08550 PF08264 Anticodon-binding domain of tRNA NDK36_08550 PF00133 tRNA synthetases class I (I, L, M and V) NDK36_08555 PF01258 Prokaryotic dksA/traR C4-type zinc finger NDK36_08560 PF01252 Signal peptidase (SPase) II NDK36_08565 PF00849 RNA pseudouridylate synthase NDK36_08565 PF01479 S4 domain NDK36_08570 PF00156 Phosphoribosyl transferase domain NDK36_08575 PF00860 Permease family NDK36_08580 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain NDK36_08580 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain NDK36_08585 PF01979 Amidohydrolase family NDK36_08590 PF00117 Glutamine amidotransferase class-I NDK36_08590 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain NDK36_08595 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain NDK36_08595 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain NDK36_08595 PF02142 MGS-like domain NDK36_08600 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B NDK36_08600 PF00175 Oxidoreductase NAD-binding domain NDK36_08605 PF01180 Dihydroorotate dehydrogenase NDK36_08610 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family NDK36_08615 PF00156 Phosphoribosyl transferase domain NDK36_08620 PF01507 Phosphoadenosine phosphosulfate reductase family NDK36_08625 PF01384 Phosphate transporter family NDK36_08630 PF01747 ATP-sulfurylase NDK36_08630 PF14306 PUA-like domain NDK36_08640 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases NDK36_08645 PF01903 CbiX NDK36_08655 PF05670 NFACT protein RNA binding domain NDK36_08660 PF00689 Cation transporting ATPase, C-terminus NDK36_08660 PF00690 Cation transporter/ATPase, N-terminus NDK36_08665 PF08340 Domain of unknown function (DUF1732) NDK36_08665 PF03755 YicC-like family, N-terminal region NDK36_08670 PF04025 Domain of unknown function (DUF370) NDK36_08675 PF00625 Guanylate kinase NDK36_08680 PF01192 RNA polymerase Rpb6 NDK36_08685 PF04127 DNA / pantothenate metabolism flavoprotein NDK36_08685 PF02441 Flavoprotein NDK36_08690 PF04851 Type III restriction enzyme, res subunit NDK36_08690 PF00271 Helicase conserved C-terminal domain NDK36_08690 PF17764 3′ DNA-binding domain (3′BD) NDK36_08690 PF18074 Primosomal protein N C-terminal domain NDK36_08690 PF18319 PriA DNA helicase Cys-rich region (CRR) domain NDK36_08695 PF01327 Polypeptide deformylase NDK36_08700 PF00551 Formyl transferase NDK36_08700 PF02911 Formyl transferase, C-terminal domain NDK36_08705 PF01029 NusB family NDK36_08705 PF01189 16S rRNA methyltransferase RsmB/F NDK36_08710 PF04055 Radical SAM superfamily NDK36_08720 PF03793 PASTA domain NDK36_08720 PF00069 Protein kinase domain NDK36_08725 PF03193 RsgA GTPase NDK36_08725 PF16745 RsgA N-terminal domain NDK36_08730 PF00834 Ribulose-phosphate 3 epimerase family NDK36_08735 PF04263 Thiamin pyrophosphokinase, catalytic domain NDK36_08735 PF04265 Thiamin pyrophosphokinase, vitamin B1 binding domain NDK36_08740 PF08183 Stage V sporulation protein family NDK36_08745 PF00830 Ribosomal L28 family NDK36_08750 PF03780 Asp23 family, cell envelope-related function NDK36_08755 PF13684 Dihydroxyacetone kinase family NDK36_08755 PF02734 DAK2 domain NDK36_08760 PF01842 ACT domain NDK36_08760 PF03315 Serine dehydratase beta chain NDK36_08765 PF03313 Serine dehydratase alpha chain NDK36_08770 PF17191 RecG wedge domain NDK36_08770 PF00271 Helicase conserved C-terminal domain NDK36_08770 PF00270 DEAD/DEAH box helicase NDK36_08775 PF03061 Thioesterase superfamily NDK36_08780 PF02504 Fatty acid synthesis protein NDK36_08785 PF00698 Acyl transferase domain NDK36_08795 PF00550 Phosphopantetheine attachment site NDK36_08800 PF14622 Ribonuclease-III-like NDK36_08800 PF00035 Double-stranded RNA binding motif NDK36_08805 PF06470 SMC proteins Flexible Hinge Domain NDK36_08805 PF02463 RecF/RecN/SMC N terminal domain NDK36_08810 PF00448 SRP54-type protein, GTPase domain NDK36_08810 PF02881 SRP54-type protein, helical bundle domain NDK36_08815 PF02369 Bacterial Ig-like domain (group 1) NDK36_08820 PF04297 Putative helix-turn-helix protein, YlxM / p13 like NDK36_08825 PF00448 SRP54-type protein, GTPase domain NDK36_08825 PF02881 SRP54-type protein, helical bundle domain NDK36_08825 PF02978 Signal peptide binding domain NDK36_08830 PF00886 Ribosomal protein S16 NDK36_08840 PF11068 YlqD protein NDK36_08845 PF05239 PRC-barrel domain NDK36_08845 PF01782 RimM N-terminal domain NDK36_08850 PF01746 tRNA (Guanine-1)-methyltransferase NDK36_08855 PF01245 Ribosomal protein L19 NDK36_08860 PF01926 50S ribosome-binding GTPase NDK36_08865 PF01351 Ribonuclease HII NDK36_08875 PF01312 FlhB HrpN YscU SpaS Family NDK36_08880 PF08442 ATP-grasp domain NDK36_08880 PF00549 CoA-ligase NDK36_08885 PF02629 CoA binding domain NDK36_08885 PF00549 CoA-ligase NDK36_08890 PF02481 DNA recombination-mediator protein A NDK36_08895 PF01396 Topoisomerase DNA binding C4 zinc finger NDK36_08895 PF01131 DNA topoisomerase NDK36_08895 PF01751 Toprim domain NDK36_08900 PF01134 Glucose inhibited division protein A NDK36_08905 PF02899 Phage integrase, N-terminal SAM-like domain NDK36_08905 PF00589 Phage integrase family NDK36_08910 PF00227 Proteasome subunit NDK36_08915 PF00004 ATPase family associated with various cellular activities (AAA) NDK36_08915 PF07724 AAA domain (Cdc48 subfamily) NDK36_08915 PF10431 C-terminal, D2-small domain, of ClpB protein NDK36_08920 PF06018 CodY GAF-like domain NDK36_08920 PF08222 CodY helix-turn-helix domain NDK36_08925 PF00460 Flagella basal body rod protein NDK36_08930 PF06429 Flagellar basal body rod FlgEFG protein C-terminal NDK36_08930 PF00460 Flagella basal body rod protein NDK36_08935 PF02049 Flagellar hook-basal body complex protein FliE NDK36_08945 PF14842 FliG N-terminal domain NDK36_08945 PF14841 FliG middle domain NDK36_08945 PF01706 FliG C-terminal domain NDK36_08950 PF02108 Flagellar assembly protein FliH NDK36_08955 PF18269 T3SS EscN ATPase C-terminal domain NDK36_08955 PF02874 ATP synthase alpha/beta family, beta-barrel domain NDK36_08955 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain NDK36_08960 PF02050 Flagellar FliJ protein NDK36_08965 PF03448 MgtE intracellular N domain NDK36_08970 PF02120 Flagellar hook-length control protein FliK NDK36_08975 PF03963 Flagellar hook capping protein - N-terminal region NDK36_08980 PF06429 Flagellar basal body rod FlgEFG protein C-terminal NDK36_08980 PF00460 Flagella basal body rod protein NDK36_08985 PF06289 Flagellar and Swarming motility proteins NDK36_08990 PF03748 Flagellar basal body-associated protein FliL NDK36_08995 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term NDK36_08995 PF02154 Flagellar motor switch protein FliM NDK36_09000 PF04509 CheC-like family NDK36_09000 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term NDK36_09005 PF00072 Response regulator receiver domain NDK36_09010 PF04347 Flagellar biosynthesis protein, FliO NDK36_09015 PF00813 FliP family NDK36_09020 PF01313 Bacterial export proteins, family 3 NDK36_09030 PF01312 FlhB HrpN YscU SpaS Family NDK36_09035 PF00771 FHIPEP family NDK36_09040 PF00448 SRP54-type protein, GTPase domain NDK36_09045 PF10609 NUBPL iron-transfer P-loop NTPase NDK36_09050 PF00072 Response regulator receiver domain NDK36_09050 PF01339 CheB methylesterase NDK36_09055 PF01584 CheW-like domain NDK36_09055 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NDK36_09055 PF01627 Hpt domain NDK36_09055 PF07194 P2 response regulator binding domain NDK36_09055 PF02895 Signal transducing histidine kinase, homodimeric domain NDK36_09060 PF01584 CheW-like domain NDK36_09070 PF03975 CheD chemotactic sensory transduction NDK36_09075 PF04542 Sigma-70 region 2 NDK36_09075 PF04539 Sigma-70 region 3 NDK36_09075 PF04545 Sigma-70, region 4 NDK36_09085 PF00318 Ribosomal protein S2 NDK36_09090 PF00889 Elongation factor TS NDK36_09095 PF00696 Amino acid kinase family NDK36_09100 PF01765 Ribosome recycling factor NDK36_09105 PF01255 Putative undecaprenyl diphosphate synthase NDK36_09115 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain NDK36_09115 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase NDK36_09115 PF13288 DXP reductoisomerase C-terminal domain NDK36_09120 PF17820 PDZ domain NDK36_09120 PF02163 Peptidase family M50 NDK36_09125 PF04073 Aminoacyl-tRNA editing domain NDK36_09125 PF03129 Anticodon binding domain NDK36_09125 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) NDK36_09130 PF11490 DNA polymerase III polC-type N-terminus II NDK36_09130 PF07733 Bacterial DNA polymerase III alpha NTPase domain NDK36_09130 PF17657 Bacterial DNA polymerase III alpha subunit finger domain NDK36_09130 PF14579 Helix-hairpin-helix motif NDK36_09130 PF02811 PHP domain NDK36_09130 PF00929 Exonuclease NDK36_09130 PF14480 DNA polymerase III polC-type N-terminus I NDK36_09135 PF17384 RimP C-terminal SH3 domain NDK36_09135 PF02576 RimP N-terminal domain NDK36_09140 PF13184 NusA-like KH domain NDK36_09140 PF08529 NusA N-terminal domain NDK36_09140 PF00575 S1 RNA binding domain NDK36_09145 PF04296 Protein of unknown function (DUF448) NDK36_09150 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family NDK36_09155 PF11987 Translation-initiation factor 2 NDK36_09155 PF04760 Translation initiation factor IF-2, N-terminal region NDK36_09155 PF00009 Elongation factor Tu GTP binding domain NDK36_09160 PF04456 Protein of unknown function (DUF503) NDK36_09165 PF02033 Ribosome-binding factor A NDK36_09170 PF16198 tRNA pseudouridylate synthase B C-terminal domain NDK36_09170 PF01509 TruB family pseudouridylate synthase (N terminal domain) NDK36_09175 PF01687 Riboflavin kinase NDK36_09175 PF06574 FAD synthetase NDK36_09180 PF00312 Ribosomal protein S15 NDK36_09185 PF00013 KH domain NDK36_09185 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain NDK36_09185 PF01138 3' exoribonuclease family, domain 1 NDK36_09185 PF03725 3' exoribonuclease family, domain 2 NDK36_09185 PF00575 S1 RNA binding domain NDK36_09190 PF01522 Polysaccharide deacetylase NDK36_09195 PF00675 Insulinase (Peptidase family M16) NDK36_09195 PF05193 Peptidase M16 inactive domain NDK36_09200 PF05239 PRC-barrel domain NDK36_09205 PF01262 Alanine dehydrogenase/PNT, C-terminal domain NDK36_09205 PF16924 Dipicolinate synthase subunit A N-terminal domain NDK36_09210 PF02441 Flavoprotein NDK36_09215 PF01118 Semialdehyde dehydrogenase, NAD binding domain NDK36_09215 PF02774 Semialdehyde dehydrogenase, dimerisation domain NDK36_09220 PF00696 Amino acid kinase family NDK36_09220 PF13840 ACT domain NDK36_09225 PF00701 Dihydrodipicolinate synthetase family NDK36_09230 PF00753 Metallo-beta-lactamase superfamily NDK36_09230 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain NDK36_09230 PF17770 Ribonuclease J C-terminal domain NDK36_09235 PF00574 Clp protease NDK36_09240 PF14035 YlzJ-like protein NDK36_09245 PF17854 FtsK alpha domain NDK36_09245 PF01580 FtsK/SpoIIIE family NDK36_09245 PF09397 Ftsk gamma domain NDK36_09250 PF07702 UTRA domain NDK36_09250 PF00392 Bacterial regulatory proteins, gntR family NDK36_09255 PF07690 Major Facilitator Superfamily NDK36_09260 PF05193 Peptidase M16 inactive domain NDK36_09265 PF00675 Insulinase (Peptidase family M16) NDK36_09265 PF05193 Peptidase M16 inactive domain NDK36_09275 PF11588 Protein of unknown function (DUF3243) NDK36_09280 PF11868 Protein of unknown function (DUF3388) NDK36_09285 PF13464 Domain of unknown function (DUF4115) NDK36_09290 PF01066 CDP-alcohol phosphatidyltransferase NDK36_09295 PF02464 Competence-damaged protein NDK36_09295 PF18146 Damage-inducible protein CinA KH domain NDK36_09295 PF00994 Probable molybdopterin binding domain NDK36_09300 PF00154 recA bacterial DNA recombination protein NDK36_09305 PF00144 Beta-lactamase NDK36_09310 PF00013 KH domain NDK36_09310 PF12072 Domain of unknown function (DUF3552) NDK36_09310 PF01966 HD domain NDK36_09315 PF13277 YmdB-like protein NDK36_09320 PF04232 Stage V sporulation protein S (SpoVS) NDK36_09325 PF08240 Alcohol dehydrogenase GroES-like domain NDK36_09325 PF00107 Zinc-binding dehydrogenase NDK36_09330 PF00155 Aminotransferase class I and II NDK36_09335 PF04055 Radical SAM superfamily NDK36_09335 PF01938 TRAM domain NDK36_09335 PF00919 Uncharacterized protein family UPF0004 NDK36_09340 PF06133 Control of competence regulator ComK, YlbF/YmcA NDK36_09345 PF10628 Outer spore coat protein E (CotE) NDK36_09350 PF01624 MutS domain I NDK36_09350 PF05188 MutS domain II NDK36_09350 PF05192 MutS domain III NDK36_09350 PF05190 MutS family domain IV NDK36_09350 PF00488 MutS domain V NDK36_09355 PF01119 DNA mismatch repair protein, C-terminal domain NDK36_09355 PF08676 MutL C terminal dimerisation domain NDK36_09360 PF17356 Phage-like element PBSX protein XtrA NDK36_09375 PF02368 Bacterial Ig-like domain (group 2) NDK36_09450 PF14184 Regulatory protein YrvL NDK36_09460 PF13977 BetI-type transcriptional repressor, C-terminal NDK36_09460 PF00440 Bacterial regulatory proteins, tetR family NDK36_09475 PF00082 Subtilase family NDK36_09485 PF05908 Poly-gamma-glutamate hydrolase NDK36_09490 PF02566 OsmC-like protein NDK36_09495 PF00893 Small Multidrug Resistance protein NDK36_09500 PF00893 Small Multidrug Resistance protein NDK36_09510 PF12788 YmaF family NDK36_09520 PF17209 Hfq protein NDK36_09525 PF14157 YmzC-like protein NDK36_09535 PF07972 NrdI Flavodoxin like NDK36_09540 PF02867 Ribonucleotide reductase, barrel domain NDK36_09540 PF00317 Ribonucleotide reductase, all-alpha domain NDK36_09540 PF08343 Ribonucleotide reductase N-terminal NDK36_09545 PF00268 Ribonucleotide reductase, small chain NDK36_09555 PF01520 N-acetylmuramoyl-L-alanine amidase NDK36_09555 PF05036 Sporulation related domain NDK36_09560 PF00004 ATPase family associated with various cellular activities (AAA) NDK36_09560 PF17866 AAA lid domain NDK36_09565 PF01926 50S ribosome-binding GTPase NDK36_09565 PF13167 GTP-binding GTPase N-terminal NDK36_09565 PF16360 GTP-binding GTPase Middle Region NDK36_09570 PF06838 Methionine gamma-lyase NDK36_09575 PF13411 MerR HTH family regulatory protein NDK36_09580 PF00120 Glutamine synthetase, catalytic domain NDK36_09580 PF03951 Glutamine synthetase, beta-Grasp domain NDK36_09585 PF02899 Phage integrase, N-terminal SAM-like domain NDK36_09585 PF00589 Phage integrase family NDK36_09605 PF03374 Phage antirepressor protein KilAC domain NDK36_09605 PF09669 Phage regulatory protein Rha (Phage_pRha) NDK36_09750 PF01464 Transglycosylase SLT domain NDK36_09785 PF10960 BhlA holin family NDK36_09790 PF04688 SPP1 phage holin NDK36_09795 PF01471 Putative peptidoglycan binding domain NDK36_09795 PF01476 LysM domain NDK36_09795 PF01510 N-acetylmuramoyl-L-alanine amidase NDK36_09805 PF04740 LXG domain of WXG superfamily NDK36_09805 PF14411 A nuclease of the HNH/ENDO VII superfamily with conserved LHH NDK36_09850 PF01695 IstB-like ATP binding protein NDK36_09855 PF00665 Integrase core domain NDK36_09875 PF13443 Cro/C1-type HTH DNA-binding domain NDK36_09925 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain NDK36_09925 PF04616 Glycosyl hydrolases family 43 NDK36_09930 PF00480 ROK family NDK36_09935 PF01261 Xylose isomerase-like TIM barrel NDK36_09940 PF02782 FGGY family of carbohydrate kinases, C-terminal domain NDK36_09940 PF00370 FGGY family of carbohydrate kinases, N-terminal domain NDK36_09950 PF00872 Transposase, Mutator family NDK36_09955 PF00565 Staphylococcal nuclease homologue NDK36_09960 PF00083 Sugar (and other) transporter NDK36_09965 PF00842 Alanine racemase, C-terminal domain NDK36_09965 PF01168 Alanine racemase, N-terminal domain NDK36_09980 PF00692 dUTPase NDK36_09995 PF00303 Thymidylate synthase NDK36_10005 PF15493 Domain of unknown function, YrpD NDK36_10010 PF14037 YoqO-like protein NDK36_10020 PF02416 mttA/Hcf106 family NDK36_10040 PF08327 Activator of Hsp90 ATPase homolog 1-like protein NDK36_10065 PF13761 Domain of unknown function (DUF4166) NDK36_10070 PF14158 YndJ-like protein NDK36_10080 PF05908 Poly-gamma-glutamate hydrolase NDK36_10085 PF10710 Protein of unknown function (DUF2512) NDK36_10090 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily NDK36_10100 PF00717 Peptidase S24-like NDK36_10100 PF01726 LexA DNA binding domain NDK36_10105 PF01476 LysM domain NDK36_10110 PF00239 Resolvase, N terminal domain NDK36_10115 PF05979 Bacterial protein of unknown function (DUF896) NDK36_10120 PF02779 Transketolase, pyrimidine binding domain NDK36_10120 PF02780 Transketolase, C-terminal domain NDK36_10120 PF00456 Transketolase, thiamine diphosphate binding domain NDK36_10125 PF10747 Sporulation inhibitor of replication protein SirA NDK36_10130 PF03672 Uncharacterised protein family (UPF0154) NDK36_10135 PF09388 Spo0E like sporulation regulatory protein NDK36_10140 PF02683 Cytochrome C biogenesis protein transmembrane region NDK36_10145 PF00072 Response regulator receiver domain NDK36_10150 PF07301 Protein of unknown function (DUF1453) NDK36_10155 PF11084 Protein of unknown function (DUF2621) NDK36_10165 PF08179 Small acid-soluble spore protein P family NDK36_10175 PF00694 Aconitase C-terminal domain NDK36_10175 PF00330 Aconitase family (aconitate hydratase) NDK36_10180 PF00578 AhpC/TSA family NDK36_10185 PF13040 Fur-regulated basic protein B NDK36_10190 PF08177 Small acid-soluble spore protein N family NDK36_10200 PF03061 Thioesterase superfamily NDK36_10210 PF01521 Iron-sulphur cluster biosynthesis NDK36_10215 PF02660 Glycerol-3-phosphate acyltransferase NDK36_10220 PF13380 CoA binding domain NDK36_10225 PF00204 DNA gyrase B NDK36_10225 PF01751 Toprim domain NDK36_10225 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NDK36_10225 PF00986 DNA gyrase B subunit, carboxyl terminus NDK36_10230 PF00521 DNA gyrase/topoisomerase IV, subunit A NDK36_10230 PF03989 DNA gyrase C-terminal domain, beta-propeller NDK36_10240 PF01235 Sodium:alanine symporter family NDK36_10245 PF00150 Cellulase (glycosyl hydrolase family 5) NDK36_10245 PF00942 Cellulose binding domain NDK36_10250 PF17452 Uncharacterized YnfE-like NDK36_10255 PF17189 Glycosyl hydrolase family 30 beta sandwich domain NDK36_10265 PF04138 GtrA-like protein NDK36_10270 PF00483 Nucleotidyl transferase NDK36_10275 PF09335 SNARE associated Golgi protein NDK36_10285 PF01039 Carboxyl transferase domain NDK36_10290 PF00378 Enoyl-CoA hydratase/isomerase NDK36_10295 PF00682 HMGL-like NDK36_10300 PF00364 Biotin-requiring enzyme NDK36_10305 PF02785 Biotin carboxylase C-terminal domain NDK36_10305 PF00289 Biotin carboxylase, N-terminal domain NDK36_10305 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain NDK36_10310 PF00501 AMP-binding enzyme NDK36_10310 PF13193 AMP-binding enzyme C-terminal domain NDK36_10315 PF00441 Acyl-CoA dehydrogenase, C-terminal domain NDK36_10315 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NDK36_10315 PF02770 Acyl-CoA dehydrogenase, middle domain NDK36_10320 PF17329 Family of unknown function (DUF5367) NDK36_10330 PF02638 Glycosyl hydrolase-like 10 NDK36_10335 PF07098 Protein of unknown function (DUF1360) NDK36_10345 PF00501 AMP-binding enzyme NDK36_10345 PF13193 AMP-binding enzyme C-terminal domain NDK36_10345 PF00668 Condensation domain NDK36_10345 PF00550 Phosphopantetheine attachment site NDK36_10350 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family NDK36_10355 PF01263 Aldose 1-epimerase NDK36_10360 PF01554 MatE NDK36_10365 PF16800 IseA DL-endopeptidase inhibitor NDK36_10380 PF00589 Phage integrase family NDK36_10385 PF12728 Helix-turn-helix domain NDK36_10395 PF03466 LysR substrate binding domain NDK36_10395 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NDK36_10400 PF00107 Zinc-binding dehydrogenase NDK36_10400 PF08240 Alcohol dehydrogenase GroES-like domain NDK36_10405 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster NDK36_10405 PF07992 Pyridine nucleotide-disulphide oxidoreductase NDK36_10410 PF00310 Glutamine amidotransferases class-II NDK36_10410 PF04898 Glutamate synthase central domain NDK36_10410 PF01645 Conserved region in glutamate synthase NDK36_10410 PF01493 GXGXG motif NDK36_10415 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NDK36_10415 PF03466 LysR substrate binding domain NDK36_10440 PF02334 Replication terminator protein NDK36_10445 PF00106 short chain dehydrogenase NDK36_10450 PF06103 Bacterial protein of unknown function (DUF948) NDK36_10460 PF13302 Acetyltransferase (GNAT) domain NDK36_10475 PF00005 ABC transporter NDK36_10485 PF07690 Major Facilitator Superfamily NDK36_10490 PF00872 Transposase, Mutator family NDK36_10520 PF00872 Transposase, Mutator family NDK36_10540 PF00144 Beta-lactamase NDK36_10550 PF17094 Uncharacterised protein family (UPF0715) NDK36_10570 PF01609 Transposase DDE domain NDK36_10575 PF00899 ThiF family NDK36_10580 PF01209 ubiE/COQ5 methyltransferase family NDK36_10585 PF07690 Major Facilitator Superfamily NDK36_10590 PF00872 Transposase, Mutator family NDK36_10620 PF13302 Acetyltransferase (GNAT) domain NDK36_10640 PF14411 A nuclease of the HNH/ENDO VII superfamily with conserved LHH NDK36_10640 PF04740 LXG domain of WXG superfamily NDK36_10645 PF09346 SMI1 / KNR4 family (SUKH-1) NDK36_10650 PF01593 Flavin containing amine oxidoreductase NDK36_10655 PF01588 Putative tRNA binding domain NDK36_10660 PF07883 Cupin domain NDK36_10660 PF12833 Helix-turn-helix domain NDK36_10665 PF00583 Acetyltransferase (GNAT) family NDK36_10670 PF00440 Bacterial regulatory proteins, tetR family NDK36_10670 PF13305 Tetracyclin repressor-like, C-terminal domain NDK36_10675 PF00753 Metallo-beta-lactamase superfamily NDK36_10680 PF06445 GyrI-like small molecule binding domain NDK36_10685 PF08279 HTH domain NDK36_10685 PF13280 WYL domain NDK36_10695 PF01022 Bacterial regulatory protein, arsR family NDK36_10705 PF04238 Protein of unknown function (DUF420) NDK36_10720 PF02016 LD-carboxypeptidase N-terminal domain NDK36_10720 PF17676 LD-carboxypeptidase C-terminal domain NDK36_10725 PF00487 Fatty acid desaturase NDK36_10730 PF07730 Histidine kinase NDK36_10735 PF00196 Bacterial regulatory proteins, luxR family NDK36_10735 PF00072 Response regulator receiver domain NDK36_10740 PF06725 3D domain NDK36_10740 PF01476 LysM domain NDK36_10745 PF09382 RQC domain NDK36_10745 PF16124 RecQ zinc-binding NDK36_10745 PF00271 Helicase conserved C-terminal domain NDK36_10745 PF00270 DEAD/DEAH box helicase NDK36_10745 PF00570 HRDC domain NDK36_10755 PF02525 Flavodoxin-like fold NDK36_10760 PF01258 Prokaryotic dksA/traR C4-type zinc finger NDK36_10775 PF00011 Hsp20/alpha crystallin family NDK36_10790 PF08000 Bacterial PH domain NDK36_10800 PF00171 Aldehyde dehydrogenase family NDK36_10805 PF13249 Squalene-hopene cyclase N-terminal domain NDK36_10805 PF13243 Squalene-hopene cyclase C-terminal domain NDK36_10810 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain NDK36_10810 PF02777 Iron/manganese superoxide dismutases, C-terminal domain NDK36_10815 PF00209 Sodium:neurotransmitter symporter family NDK36_10820 PF01758 Sodium Bile acid symporter family NDK36_10825 PF02817 e3 binding domain NDK36_10825 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) NDK36_10825 PF00364 Biotin-requiring enzyme NDK36_10830 PF02779 Transketolase, pyrimidine binding domain NDK36_10830 PF00676 Dehydrogenase E1 component NDK36_10830 PF16870 2-oxoglutarate dehydrogenase C-terminal NDK36_10835 PF00092 von Willebrand factor type A domain NDK36_10840 PF07728 AAA domain (dynein-related subfamily) NDK36_10845 PF13627 Prokaryotic lipoprotein-attachment site NDK36_10845 PF00080 Copper/zinc superoxide dismutase (SODC) NDK36_10850 PF01476 LysM domain NDK36_10850 PF00877 NlpC/P60 family NDK36_10855 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase NDK36_10860 PF02457 DisA bacterial checkpoint controller nucleotide-binding NDK36_10860 PF10372 Bacterial membrane-spanning protein N-terminus NDK36_10865 PF01554 MatE NDK36_10870 PF01740 STAS domain NDK36_10875 PF02585 GlcNAc-PI de-N-acetylase NDK36_10880 PF08830 Protein of unknown function (DUF1806) NDK36_10890 PF00892 EamA-like transporter family NDK36_10905 PF02447 GntP family permease NDK36_10910 PF02447 GntP family permease NDK36_10915 PF14552 Tautomerase enzyme NDK36_10920 PF01638 HxlR-like helix-turn-helix NDK36_10925 PF00881 Nitroreductase family NDK36_10935 PF01738 Dienelactone hydrolase family NDK36_10945 PF11755 Protein of unknown function (DUF3311) NDK36_10950 PF00474 Sodium:solute symporter family NDK36_10955 PF17820 PDZ domain NDK36_10955 PF03572 Peptidase family S41 NDK36_10955 PF01471 Putative peptidoglycan binding domain NDK36_10960 PF08241 Methyltransferase domain NDK36_10970 PF02557 D-alanyl-D-alanine carboxypeptidase NDK36_10975 PF01048 Phosphorylase superfamily NDK36_10985 PF14191 YodL-like NDK36_10990 PF01569 PAP2 superfamily NDK36_10995 PF14162 YozD-like protein NDK36_11010 PF06855 YozE SAM-like fold NDK36_11015 PF14122 YokU-like protein, putative antitoxin NDK36_11020 PF12544 Lysine-2,3-aminomutase NDK36_11025 PF00583 Acetyltransferase (GNAT) family NDK36_11030 PF01546 Peptidase family M20/M25/M40 NDK36_11030 PF07687 Peptidase dimerisation domain NDK36_11035 PF01144 Coenzyme A transferase NDK36_11040 PF01144 Coenzyme A transferase NDK36_11045 PF00202 Aminotransferase class-III NDK36_11060 PF00583 Acetyltransferase (GNAT) family NDK36_11065 PF00535 Glycosyl transferase family 2 NDK36_11080 PF12996 DUF based on E. rectale Gene description (DUF3880) NDK36_11085 PF02333 Phytase NDK36_11090 PF02719 Polysaccharide biosynthesis protein NDK36_11095 PF01641 SelR domain NDK36_11100 PF01625 Peptide methionine sulfoxide reductase NDK36_11105 PF01047 MarR family NDK36_11110 PF01554 MatE NDK36_11115 PF17431 Uncharacterized YmpT-like NDK36_11120 PF09911 Uncharacterized protein conserved in bacteria (DUF2140) NDK36_11125 PF13472 GDSL-like Lipase/Acylhydrolase family NDK36_11130 PF02630 SCO1/SenC NDK36_11135 PF10751 Protein of unknown function (DUF2535) NDK36_11140 PF00585 C-terminal regulatory domain of Threonine dehydratase NDK36_11140 PF00291 Pyridoxal-phosphate dependent enzyme NDK36_11145 PF00158 Sigma-54 interaction domain NDK36_11145 PF08461 Ribonuclease R winged-helix domain NDK36_11150 PF03006 Haemolysin-III related NDK36_11160 PF00186 Dihydrofolate reductase NDK36_11165 PF04608 Phosphatidylglycerophosphatase A NDK36_11170 PF14005 YpjP-like protein NDK36_11175 PF04445 Putative SAM-dependent methyltransferase NDK36_11180 PF06491 Disulphide isomerase NDK36_11185 PF00920 Dehydratase family NDK36_11190 PF13769 Virulence factor NDK36_11190 PF08712 Scaffold protein Nfu/NifU N terminal NDK36_11195 PF01966 HD domain NDK36_11200 PF00255 Glutathione peroxidase NDK36_11205 PF04204 Homoserine O-succinyltransferase NDK36_11210 PF06925 Monogalactosyldiacylglycerol (MGDG) synthase NDK36_11210 PF00534 Glycosyl transferases group 1 NDK36_11220 PF00313 'Cold-shock' DNA-binding domain NDK36_11230 PF10819 Protein of unknown function (DUF2564) NDK36_11235 PF10782 Zinc-finger NDK36_11240 PF13456 Reverse transcriptase-like NDK36_11245 PF02592 Putative vitamin uptake transporter NDK36_11250 PF13456 Reverse transcriptase-like NDK36_11260 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain NDK36_11260 PF01367 5'-3' exonuclease, C-terminal SAM fold NDK36_11270 PF10752 Protein of unknown function (DUF2533) NDK36_11275 PF00350 Dynamin family NDK36_11285 PF04140 Isoprenylcysteine carboxyl methyltransferase (ICMT) family NDK36_11290 PF02797 Chalcone and stilbene synthases, C-terminal domain NDK36_11290 PF00195 Chalcone and stilbene synthases, N-terminal domain NDK36_11295 PF00860 Permease family NDK36_11300 PF00156 Phosphoribosyl transferase domain NDK36_11305 PF02074 Carboxypeptidase Taq (M32) metallopeptidase NDK36_11310 PF03812 2-keto-3-deoxygluconate permease NDK36_11315 PF01081 KDPG and KHG aldolase NDK36_11320 PF00294 pfkB family carbohydrate kinase NDK36_11325 PF00356 Bacterial regulatory proteins, lacI family NDK36_11330 PF04962 KduI/IolB family NDK36_11340 PF13307 Helicase C-terminal domain NDK36_11350 PF14139 YpzG-like protein NDK36_11355 PF02926 THUMP domain NDK36_11355 PF01170 Putative RNA methylase family UPF0020 NDK36_11365 PF05103 DivIVA protein NDK36_11370 PF06908 YspA SLOG family NDK36_11375 PF11122 Inner spore coat protein D NDK36_11385 PF13482 RNase_H superfamily NDK36_11390 PF09369 Domain of unknown function (DUF1998) NDK36_11390 PF00271 Helicase conserved C-terminal domain NDK36_11390 PF00270 DEAD/DEAH box helicase NDK36_11395 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 NDK36_11405 PF14179 YppG-like protein NDK36_11410 PF14178 YppF-like protein NDK36_11415 PF08807 Bacterial domain of unknown function (DUF1798) NDK36_11420 PF17522 Family of unknown function (DUF5446) NDK36_11430 PF10720 Protein of unknown function (DUF2515) NDK36_11435 PF03838 Recombination protein U NDK36_11440 PF00905 Penicillin binding protein transpeptidase domain NDK36_11440 PF00912 Transglycosylase NDK36_11450 PF10576 Iron-sulfur binding domain of endonuclease III NDK36_11450 PF00633 Helix-hairpin-helix motif NDK36_11450 PF00730 HhH-GPD superfamily base excision DNA repair protein NDK36_11455 PF07261 Replication initiation and membrane attachment NDK36_11460 PF00152 tRNA synthetases class II (D, K and N) NDK36_11460 PF01336 OB-fold nucleic acid binding domain NDK36_11465 PF00155 Aminotransferase class I and II NDK36_11470 PF03413 Peptidase propeptide and YPEB domain NDK36_11470 PF17881 Domain of unknown function (DUF5590) NDK36_11475 PF14084 Protein of unknown function (DUF4264) NDK36_11480 PF13307 Helicase C-terminal domain NDK36_11480 PF04851 Type III restriction enzyme, res subunit NDK36_11480 PF00929 Exonuclease NDK36_11485 PF02261 Aspartate decarboxylase NDK36_11490 PF02569 Pantoate-beta-alanine ligase NDK36_11495 PF02548 Ketopantoate hydroxymethyltransferase NDK36_11500 PF08279 HTH domain NDK36_11500 PF02237 Biotin protein ligase C terminal domain NDK36_11500 PF03099 Biotin/lipoate A/B protein ligase family NDK36_11505 PF13735 tRNA nucleotidyltransferase domain 2 putative NDK36_11505 PF12627 Probable RNA and SrmB- binding site of polymerase A NDK36_11505 PF01743 Poly A polymerase head domain NDK36_11510 PF00534 Glycosyl transferases group 1 NDK36_11510 PF13439 Glycosyltransferase Family 4 NDK36_11515 PF02585 GlcNAc-PI de-N-acetylase NDK36_11520 PF02142 MGS-like domain NDK36_11525 PF05173 Dihydrodipicolinate reductase, C-terminus NDK36_11525 PF01113 Dihydrodipicolinate reductase, N-terminus NDK36_11530 PF03819 MazG nucleotide pyrophosphohydrolase domain NDK36_11535 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) NDK36_11535 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 NDK36_11540 PF09577 Sporulation protein YpjB (SpoYpjB) NDK36_11545 PF07187 Protein of unknown function (DUF1405) NDK36_11550 PF13442 Cytochrome C oxidase, cbb3-type, subunit III NDK36_11550 PF00032 Cytochrome b(C-terminal)/b6/petD NDK36_11555 PF00033 Cytochrome b/b6/petB NDK36_11560 PF00355 Rieske [2Fe-2S] domain NDK36_11565 PF10673 Protein of unknown function (DUF2487) NDK36_11570 PF08858 IDEAL domain NDK36_11570 PF08864 UPF0302 domain NDK36_11580 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) NDK36_11585 PF01842 ACT domain NDK36_11585 PF02153 Prephenate dehydrogenase NDK36_11590 PF00155 Aminotransferase class I and II NDK36_11595 PF00290 Tryptophan synthase alpha chain NDK36_11600 PF00291 Pyridoxal-phosphate dependent enzyme NDK36_11605 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase NDK36_11610 PF00218 Indole-3-glycerol phosphate synthase NDK36_11615 PF00591 Glycosyl transferase family, a/b domain NDK36_11615 PF02885 Glycosyl transferase family, helical bundle domain NDK36_11620 PF00425 chorismate binding enzyme NDK36_11620 PF04715 Anthranilate synthase component I, N terminal region NDK36_11625 PF07736 Chorismate mutase type I NDK36_11630 PF01761 3-dehydroquinate synthase NDK36_11635 PF01264 Chorismate synthase NDK36_11640 PF03705 CheR methyltransferase, all-alpha domain NDK36_11640 PF01739 CheR methyltransferase, SAM binding domain NDK36_11645 PF00334 Nucleoside diphosphate kinase NDK36_11650 PF00348 Polyprenyl synthetase NDK36_11655 PF01209 ubiE/COQ5 methyltransferase family NDK36_11660 PF07307 Heptaprenyl diphosphate synthase (HEPPP synthase) subunit 1 NDK36_11665 PF02081 Tryptophan RNA-binding attenuator protein NDK36_11670 PF01227 GTP cyclohydrolase I NDK36_11675 PF00216 Bacterial DNA-binding protein NDK36_11680 PF09547 Stage IV sporulation protein A (spore_IV_A) NDK36_11690 PF10966 Protein of unknown function (DUF2768) NDK36_11695 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus NDK36_11695 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus NDK36_11700 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal NDK36_11700 PF01926 50S ribosome-binding GTPase NDK36_11710 PF14045 YIEGIA protein NDK36_11720 PF14140 YpzI-like protein NDK36_11725 PF01070 FMN-dependent dehydrogenase NDK36_11730 PF00575 S1 RNA binding domain NDK36_11735 PF02224 Cytidylate kinase NDK36_11740 PF17313 Family of unknown function (DUF5359) NDK36_11745 PF12945 Flagellar protein YcgR NDK36_11745 PF07238 PilZ domain NDK36_11750 PF14620 YpeB sporulation NDK36_11750 PF03413 Peptidase propeptide and YPEB domain NDK36_11755 PF07486 Cell Wall Hydrolase NDK36_11755 PF01471 Putative peptidoglycan binding domain NDK36_11760 PF13367 PrsW family intramembrane metalloprotease NDK36_11770 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase NDK36_11770 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain NDK36_11775 PF05389 Negative regulator of genetic competence (MecA) NDK36_11780 PF00149 Calcineurin-like phosphoesterase NDK36_11785 PF10864 Protein of unknown function (DUF2663) NDK36_11790 PF01476 LysM domain NDK36_11795 PF02517 CPBP intramembrane metalloprotease NDK36_11800 PF00270 DEAD/DEAH box helicase NDK36_11800 PF00271 Helicase conserved C-terminal domain NDK36_11805 PF14493 Helix-turn-helix domain NDK36_11815 PF12822 ECF transporter, substrate-specific component NDK36_11820 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain NDK36_11820 PF01842 ACT domain NDK36_11820 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain NDK36_11825 PF01487 Type I 3-dehydroquinase NDK36_11835 PF04542 Sigma-70 region 2 NDK36_11835 PF08281 Sigma-70, region 4 NDK36_11840 PF00672 HAMP domain NDK36_11840 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NDK36_11840 PF18698 Histidine kinase sensor domain NDK36_11840 PF00512 His Kinase A (phospho-acceptor) domain NDK36_11840 PF00989 PAS fold NDK36_11845 PF00072 Response regulator receiver domain NDK36_11845 PF00486 Transcriptional regulatory protein, C terminal NDK36_11850 PF01578 Cytochrome C assembly protein NDK36_11855 PF05140 ResB-like family NDK36_11860 PF00578 AhpC/TSA family NDK36_11865 PF00849 RNA pseudouridylate synthase NDK36_11865 PF01479 S4 domain NDK36_11870 PF07670 Nucleoside recognition NDK36_11875 PF07670 Nucleoside recognition NDK36_11880 PF07943 Penicillin-binding protein 5, C-terminal domain NDK36_11880 PF00768 D-alanyl-D-alanine carboxypeptidase NDK36_11885 PF13047 Protein of unknown function (DUF3907) NDK36_11890 PF04079 Segregation and condensation complex subunit ScpB NDK36_11895 PF02616 Segregation and condensation protein ScpA NDK36_11900 PF03745 Domain of unknown function (DUF309) NDK36_11905 PF00583 Acetyltransferase (GNAT) family NDK36_11910 PF00885 6,7-dimethyl-8-ribityllumazine synthase NDK36_11915 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase NDK36_11915 PF00925 GTP cyclohydrolase II NDK36_11920 PF00677 Lumazine binding domain NDK36_11925 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region NDK36_11925 PF01872 RibD C-terminal domain NDK36_11935 PF10502 Signal peptidase, peptidase S26 NDK36_11945 PF09855 Nucleic-acid-binding protein containing Zn-ribbon domain (DUF2082) NDK36_11950 PF10676 Spore germination protein gerPA/gerPF NDK36_11990 PF00872 Transposase, Mutator family NDK36_12040 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD NDK36_12050 PF06207 Protein of unknown function (DUF1002) NDK36_12055 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain NDK36_12055 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain NDK36_12060 PF03323 Bacillus/Clostridium GerA spore germination protein NDK36_12065 PF14097 Stage V sporulation protein AE1 NDK36_12070 PF03862 SpoVAC/SpoVAEB sporulation membrane protein NDK36_12075 PF07451 Stage V sporulation protein AD (SpoVAD) NDK36_12080 PF03862 SpoVAC/SpoVAEB sporulation membrane protein NDK36_12085 PF13782 Stage V sporulation protein AB NDK36_12090 PF12164 Stage V sporulation protein AA NDK36_12095 PF04542 Sigma-70 region 2 NDK36_12095 PF04539 Sigma-70 region 3 NDK36_12095 PF04545 Sigma-70, region 4 NDK36_12100 PF13581 Histidine kinase-like ATPase domain NDK36_12105 PF01740 STAS domain NDK36_12110 PF07943 Penicillin-binding protein 5, C-terminal domain NDK36_12110 PF00768 D-alanyl-D-alanine carboxypeptidase NDK36_12115 PF01048 Phosphorylase superfamily NDK36_12120 PF01676 Metalloenzyme superfamily NDK36_12125 PF00589 Phage integrase family NDK36_12125 PF02899 Phage integrase, N-terminal SAM-like domain NDK36_12130 PF14004 Protein of unknown function (DUF4227) NDK36_12135 PF01475 Ferric uptake regulator family NDK36_12140 PF01944 Stage II sporulation protein M NDK36_12150 PF00390 Malic enzyme, N-terminal domain NDK36_12150 PF03949 Malic enzyme, NAD binding domain NDK36_12150 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain NDK36_12155 PF03553 Na+/H+ antiporter family NDK36_12160 PF00206 Lyase NDK36_12160 PF10415 Fumarase C C-terminus NDK36_12165 PF17763 Glutaminase/Asparaginase C-terminal domain NDK36_12165 PF00710 Asparaginase, N-terminal NDK36_12170 PF01381 Helix-turn-helix NDK36_12180 PF00293 NUDIX domain NDK36_12185 PF13072 Mother cell inhibitor of FtsZ NDK36_12190 PF00248 Aldo/keto reductase family NDK36_12195 PF13025 Protein of unknown function (DUF3886) NDK36_12200 PF12146 Serine aminopeptidase, S33 NDK36_12205 PF10827 Protein of unknown function (DUF2552) NDK36_12210 PF01521 Iron-sulphur cluster biosynthesis NDK36_12215 PF04229 GrpB protein NDK36_12215 PF13673 Acetyltransferase (GNAT) domain NDK36_12220 PF03992 Antibiotic biosynthesis monooxygenase NDK36_12225 PF00583 Acetyltransferase (GNAT) family NDK36_12230 PF08863 YolD-like protein NDK36_12235 PF00817 impB/mucB/samB family NDK36_12235 PF11799 impB/mucB/samB family C-terminal domain NDK36_12240 PF14164 YqzH-like protein NDK36_12245 PF07690 Major Facilitator Superfamily NDK36_12260 PF00485 Phosphoribulokinase / Uridine kinase family NDK36_12265 PF00291 Pyridoxal-phosphate dependent enzyme NDK36_12270 PF00106 short chain dehydrogenase NDK36_12275 PF00753 Metallo-beta-lactamase superfamily NDK36_12280 PF03807 NADP oxidoreductase coenzyme F420-dependent NDK36_12280 PF14748 Pyrroline-5-carboxylate reductase dimerisation NDK36_12285 PF01546 Peptidase family M20/M25/M40 NDK36_12290 PF00724 NADH:flavin oxidoreductase / NADH oxidase family NDK36_12305 PF12146 Serine aminopeptidase, S33 NDK36_12310 PF00471 Ribosomal protein L33 NDK36_12315 PF12706 Beta-lactamase superfamily domain NDK36_12320 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain NDK36_12320 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain NDK36_12325 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain NDK36_12325 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase NDK36_12330 PF00817 impB/mucB/samB family NDK36_12330 PF11799 impB/mucB/samB family C-terminal domain NDK36_12330 PF11798 IMS family HHH motif NDK36_12340 PF02096 60Kd inner membrane protein NDK36_12345 PF09844 Uncharacterized conserved protein (COG2071) NDK36_12350 PF07687 Peptidase dimerisation domain NDK36_12350 PF01546 Peptidase family M20/M25/M40 NDK36_12370 PF03734 L,D-transpeptidase catalytic domain NDK36_12375 PF06081 Aromatic acid exporter family member 1 NDK36_12375 PF11728 Putative aromatic acid exporter C-terminal domain NDK36_12380 PF00005 ABC transporter NDK36_12385 PF00528 Binding-protein-dependent transport system inner membrane component NDK36_12390 PF00497 Bacterial extracellular solute-binding proteins, family 3 NDK36_12395 PF06491 Disulphide isomerase NDK36_12400 PF00781 Diacylglycerol kinase catalytic domain NDK36_12410 PF06445 GyrI-like small molecule binding domain NDK36_12410 PF13411 MerR HTH family regulatory protein NDK36_12415 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) NDK36_12415 PF00364 Biotin-requiring enzyme NDK36_12415 PF02817 e3 binding domain NDK36_12420 PF02779 Transketolase, pyrimidine binding domain NDK36_12420 PF02780 Transketolase, C-terminal domain NDK36_12425 PF00676 Dehydrogenase E1 component NDK36_12430 PF07992 Pyridine nucleotide-disulphide oxidoreductase NDK36_12430 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain NDK36_12435 PF00871 Acetokinase family NDK36_12440 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase NDK36_12440 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain NDK36_12445 PF01515 Phosphate acetyl/butaryl transferase NDK36_12450 PF00989 PAS fold NDK36_12450 PF00158 Sigma-54 interaction domain NDK36_12450 PF02954 Bacterial regulatory protein, Fis family NDK36_12455 PF11118 Protein of unknown function (DUF2627) NDK36_12465 PF03972 MmgE/PrpD family NDK36_12470 PF00285 Citrate synthase, C-terminal domain NDK36_12475 PF00441 Acyl-CoA dehydrogenase, C-terminal domain NDK36_12475 PF02770 Acyl-CoA dehydrogenase, middle domain NDK36_12475 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NDK36_12480 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain NDK36_12480 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain NDK36_12485 PF02803 Thiolase, C-terminal domain NDK36_12485 PF00108 Thiolase, N-terminal domain NDK36_12490 PF03009 Glycerophosphoryl diester phosphodiesterase family NDK36_12495 PF01520 N-acetylmuramoyl-L-alanine amidase NDK36_12510 PF00724 NADH:flavin oxidoreductase / NADH oxidase family NDK36_12515 PF08769 Sporulation initiation factor Spo0A C terminal NDK36_12515 PF00072 Response regulator receiver domain NDK36_12520 PF17820 PDZ domain NDK36_12520 PF05580 SpoIVB peptidase S55 NDK36_12525 PF13476 AAA domain NDK36_12530 PF01316 Arginine repressor, DNA binding domain NDK36_12530 PF02863 Arginine repressor, C-terminal domain NDK36_12535 PF01728 FtsJ-like methyltransferase NDK36_12535 PF01479 S4 domain NDK36_12540 PF02780 Transketolase, C-terminal domain NDK36_12540 PF02779 Transketolase, pyrimidine binding domain NDK36_12540 PF13292 1-deoxy-D-xylulose-5-phosphate synthase NDK36_12545 PF00348 Polyprenyl synthetase NDK36_12550 PF02609 Exonuclease VII small subunit NDK36_12555 PF02601 Exonuclease VII, large subunit NDK36_12555 PF13742 OB-fold nucleic acid binding domain NDK36_12560 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain NDK36_12560 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain NDK36_12565 PF01029 NusB family NDK36_12570 PF03780 Asp23 family, cell envelope-related function NDK36_12575 PF02785 Biotin carboxylase C-terminal domain NDK36_12575 PF00289 Biotin carboxylase, N-terminal domain NDK36_12575 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain NDK36_12580 PF00364 Biotin-requiring enzyme NDK36_12590 PF12685 SpoIIIAH-like protein NDK36_12600 PF09581 Stage III sporulation protein AF (Spore_III_AF) NDK36_12605 PF09546 Stage III sporulation protein AE (spore_III_AE) NDK36_12610 PF06686 Stage III sporulation protein AC/AD protein family NDK36_12615 PF06686 Stage III sporulation protein AC/AD protein family NDK36_12620 PF09548 Stage III sporulation protein AB (spore_III_AB) NDK36_12630 PF10942 Protein of unknown function (DUF2619) NDK36_12635 PF08207 Elongation factor P (EF-P) KOW-like domain NDK36_12635 PF09285 Elongation factor P, C-terminal NDK36_12635 PF01132 Elongation factor P (EF-P) OB domain NDK36_12640 PF01321 Creatinase/Prolidase N-terminal domain NDK36_12640 PF00557 Metallopeptidase family M24 NDK36_12645 PF01220 Dehydroquinase class II NDK36_12650 PF11085 Conserved membrane protein YqhR NDK36_12655 PF07136 Protein of unknown function (DUF1385) NDK36_12665 PF01734 Patatin-like phospholipase NDK36_12670 PF02742 Iron dependent repressor, metal binding and dimerisation domain NDK36_12670 PF01325 Iron dependent repressor, N-terminal DNA binding domain NDK36_12675 PF03099 Biotin/lipoate A/B protein ligase family NDK36_12680 PF00581 Rhodanese-like domain NDK36_12685 PF02347 Glycine cleavage system P-protein NDK36_12690 PF02347 Glycine cleavage system P-protein NDK36_12695 PF01571 Aminomethyltransferase folate-binding domain NDK36_12695 PF08669 Glycine cleavage T-protein C-terminal barrel domain NDK36_12700 PF00271 Helicase conserved C-terminal domain NDK36_12700 PF00176 SNF2 family N-terminal domain NDK36_12705 PF11079 Bacterial protein YqhG of unknown function NDK36_12710 PF08671 Anti-repressor SinI NDK36_12715 PF08671 Anti-repressor SinI NDK36_12715 PF01381 Helix-turn-helix NDK36_12720 PF12389 Camelysin metallo-endopeptidase NDK36_12735 PF13028 Protein of unknown function (DUF3889) NDK36_12740 PF14038 YqzE-like protein NDK36_12745 PF14173 ComG operon protein 7 NDK36_12750 PF15980 Putative Competence protein ComGF NDK36_12760 PF07963 Prokaryotic N-terminal methylation motif NDK36_12765 PF07963 Prokaryotic N-terminal methylation motif NDK36_12770 PF00482 Type II secretion system (T2SS), protein F NDK36_12775 PF00437 Type II/IV secretion system protein NDK36_12780 PF00571 CBS domain NDK36_12785 PF01544 CorA-like Mg2+ transporter protein NDK36_12790 PF01595 Cyclin M transmembrane N-terminal domain NDK36_12790 PF00571 CBS domain NDK36_12790 PF03471 Transporter associated domain NDK36_12795 PF14361 RsbT co-antagonist protein rsbRD N-terminal domain NDK36_12795 PF01740 STAS domain NDK36_12805 PF03960 ArsC family NDK36_12810 PF11117 Protein of unknown function (DUF2626) NDK36_12815 PF00753 Metallo-beta-lactamase superfamily NDK36_12820 PF10958 Protein of unknown function (DUF2759) NDK36_12825 PF01910 Thiamine-binding protein NDK36_12835 PF00246 Zinc carboxypeptidase NDK36_12840 PF00884 Sulfatase NDK36_12845 PF00480 ROK family NDK36_12850 PF06014 Bacterial protein of unknown function (DUF910) NDK36_12855 PF01694 Rhomboid family NDK36_12865 PF01812 5-formyltetrahydrofolate cyclo-ligase family NDK36_12870 PF00471 Ribosomal protein L33 NDK36_12875 PF13439 Glycosyltransferase Family 4 NDK36_12875 PF00534 Glycosyl transferases group 1 NDK36_12895 PF00005 ABC transporter NDK36_12900 PF00005 ABC transporter NDK36_12905 PF00528 Binding-protein-dependent transport system inner membrane component NDK36_12910 PF00528 Binding-protein-dependent transport system inner membrane component NDK36_12915 PF12849 PBP superfamily domain NDK36_12920 PF03717 Penicillin-binding Protein dimerisation domain NDK36_12920 PF00905 Penicillin binding protein transpeptidase domain NDK36_12925 PF07690 Major Facilitator Superfamily NDK36_12930 PF02777 Iron/manganese superoxide dismutases, C-terminal domain NDK36_12930 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain NDK36_12935 PF04306 Protein of unknown function (DUF456) NDK36_12940 PF06691 Protein of unknown function (DUF1189) NDK36_12950 PF04551 GcpE protein NDK36_12965 PF01475 Ferric uptake regulator family NDK36_12970 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 NDK36_12970 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) NDK36_12975 PF11116 Protein of unknown function (DUF2624) NDK36_12980 PF01261 Xylose isomerase-like TIM barrel NDK36_12985 PF00271 Helicase conserved C-terminal domain NDK36_12985 PF00270 DEAD/DEAH box helicase NDK36_12990 PF14181 YqfQ-like protein NDK36_12995 PF02401 LytB protein NDK36_13000 PF01784 NIF3 (NGG1p interacting factor 3) NDK36_13005 PF04816 tRNA (adenine(22)-N(1))-methyltransferase NDK36_13010 PF13442 Cytochrome C oxidase, cbb3-type, subunit III NDK36_13015 PF03979 Sigma-70 factor, region 1.1 NDK36_13015 PF00140 Sigma-70 factor, region 1.2 NDK36_13015 PF04542 Sigma-70 region 2 NDK36_13015 PF04539 Sigma-70 region 3 NDK36_13015 PF04545 Sigma-70, region 4 NDK36_13020 PF10410 DnaB-helicase binding domain of primase NDK36_13020 PF08275 DNA primase catalytic core, N-terminal domain NDK36_13020 PF01807 CHC2 zinc finger NDK36_13025 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 NDK36_13030 PF03618 Kinase/pyrophosphorylase NDK36_13035 PF00571 CBS domain NDK36_13035 PF08279 HTH domain NDK36_13040 PF02092 Glycyl-tRNA synthetase beta subunit NDK36_13045 PF02091 Glycyl-tRNA synthetase alpha subunit NDK36_13050 PF02565 Recombination protein O C terminal NDK36_13050 PF11967 Recombination protein O N terminal NDK36_13055 PF14006 YqzL-like protein NDK36_13060 PF01926 50S ribosome-binding GTPase NDK36_13060 PF07650 KH domain NDK36_13065 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region NDK36_13070 PF01219 Prokaryotic diacylglycerol kinase NDK36_13075 PF02130 Uncharacterized protein family UPF0054 NDK36_13080 PF07697 7TM-HD extracellular NDK36_13080 PF01966 HD domain NDK36_13080 PF07698 7TM receptor with intracellular HD hydrolase NDK36_13085 PF02562 PhoH-like protein NDK36_13090 PF06898 Putative stage IV sporulation protein YqfD NDK36_13095 PF07873 YabP family NDK36_13105 PF12127 SigmaW regulon antibacterial NDK36_13110 PF01957 NfeD-like C-terminal, partner-binding NDK36_13110 PF01972 Serine dehydrogenase proteinase NDK36_13115 PF09424 Yqey-like protein NDK36_13120 PF01165 Ribosomal protein S21 NDK36_13125 PF02690 Na+/Pi-cotransporter NDK36_13130 PF04055 Radical SAM superfamily NDK36_13130 PF01938 TRAM domain NDK36_13130 PF00919 Uncharacterized protein family UPF0004 NDK36_13135 PF04452 RNA methyltransferase NDK36_13145 PF00226 DnaJ domain NDK36_13145 PF00684 DnaJ central domain NDK36_13145 PF01556 DnaJ C terminal domain NDK36_13150 PF00012 Hsp70 protein NDK36_13155 PF01025 GrpE NDK36_13160 PF01628 HrcA protein C terminal domain NDK36_13165 PF06969 HemN C-terminal domain NDK36_13165 PF04055 Radical SAM superfamily NDK36_13170 PF00679 Elongation factor G C-terminus NDK36_13170 PF00009 Elongation factor Tu GTP binding domain NDK36_13170 PF03144 Elongation factor Tu domain 2 NDK36_13170 PF06421 GTP-binding protein LepA C-terminus NDK36_13175 PF12438 Protein of unknown function (DUF3679) NDK36_13180 PF07454 Stage II sporulation protein P (SpoIIP) NDK36_13185 PF03418 Germination protease NDK36_13190 PF01649 Ribosomal protein S20 NDK36_13195 PF06144 DNA polymerase III, delta subunit NDK36_13205 PF14141 YqzM-like protein NDK36_13210 PF13567 Domain of unknown function (DUF4131) NDK36_13210 PF00753 Metallo-beta-lactamase superfamily NDK36_13210 PF03772 Competence protein NDK36_13215 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region NDK36_13220 PF10531 SLBB domain NDK36_13225 PF03807 NADP oxidoreductase coenzyme F420-dependent NDK36_13225 PF14748 Pyrroline-5-carboxylate reductase dimerisation NDK36_13230 PF13649 Methyltransferase domain NDK36_13240 PF01966 HD domain NDK36_13245 PF01467 Cytidylyltransferase-like NDK36_13250 PF01985 CRS1 / YhbY (CRM) domain NDK36_13255 PF18317 Shikimate 5'-dehydrogenase C-terminal domain NDK36_13255 PF01488 Shikimate / quinate 5-dehydrogenase NDK36_13255 PF08501 Shikimate dehydrogenase substrate binding domain NDK36_13260 PF01926 50S ribosome-binding GTPase NDK36_13270 PF08970 Sporulation inhibitor A NDK36_13275 PF00657 GDSL-like Lipase/Acylhydrolase NDK36_13280 PF01510 N-acetylmuramoyl-L-alanine amidase NDK36_13280 PF01471 Putative peptidoglycan binding domain NDK36_13285 PF09335 SNARE associated Golgi protein NDK36_13290 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain NDK36_13290 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase NDK36_13300 PF14040 Deoxyribonuclease NucA/NucB NDK36_13305 PF04542 Sigma-70 region 2 NDK36_13305 PF04545 Sigma-70, region 4 NDK36_13320 PF00206 Lyase NDK36_13320 PF10415 Fumarase C C-terminus NDK36_13325 PF03466 LysR substrate binding domain NDK36_13325 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NDK36_13340 PF13176 Tetratricopeptide repeat NDK36_13340 PF18801 response regulator aspartate phosphatase H, N terminal NDK36_13395 PF18593 CdiI immunity protein NDK36_13400 PF00665 Integrase core domain NDK36_13405 PF01695 IstB-like ATP binding protein NDK36_13420 PF09393 Phage tail tube protein NDK36_13455 PF17356 Phage-like element PBSX protein XtrA NDK36_13480 PF06445 GyrI-like small molecule binding domain NDK36_13480 PF13411 MerR HTH family regulatory protein NDK36_13485 PF07690 Major Facilitator Superfamily NDK36_13490 PF00583 Acetyltransferase (GNAT) family NDK36_13495 PF00571 CBS domain NDK36_13495 PF03471 Transporter associated domain NDK36_13495 PF01595 Cyclin M transmembrane N-terminal domain NDK36_13500 PF14142 YrzO-like protein NDK36_13505 PF00892 EamA-like transporter family NDK36_13510 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NDK36_13510 PF03466 LysR substrate binding domain NDK36_13520 PF01545 Cation efflux family NDK36_13520 PF16916 Dimerisation domain of Zinc Transporter NDK36_13535 PF05525 Branched-chain amino acid transport protein NDK36_13540 PF05437 Branched-chain amino acid transport protein (AzlD) NDK36_13550 PF01037 Lrp/AsnC ligand binding domain NDK36_13555 PF01337 Barstar (barnase inhibitor) NDK36_13560 PF00067 Cytochrome P450 NDK36_13570 PF00857 Isochorismatase family NDK36_13575 PF10823 Protein of unknown function (DUF2568) NDK36_13590 PF05163 DinB family NDK36_13595 PF04439 Streptomycin adenylyltransferase NDK36_13600 PF03060 Nitronate monooxygenase NDK36_13605 PF01177 Asp/Glu/Hydantoin racemase NDK36_13610 PF15493 Domain of unknown function, YrpD NDK36_13615 PF09680 Family of unknown function NDK36_13625 PF09223 ZinT (YodA) periplasmic lipocalin-like zinc-recruitment NDK36_13630 PF04542 Sigma-70 region 2 NDK36_13630 PF08281 Sigma-70, region 4 NDK36_13635 PF00248 Aldo/keto reductase family NDK36_13640 PF01374 Glycosyl hydrolase family 46 NDK36_13650 PF00561 alpha/beta hydrolase fold NDK36_13670 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily NDK36_13680 PF07875 Coat F domain NDK36_13685 PF00107 Zinc-binding dehydrogenase NDK36_13685 PF08240 Alcohol dehydrogenase GroES-like domain NDK36_13685 PF13823 Alcohol dehydrogenase GroES-associated NDK36_13695 PF07875 Coat F domain NDK36_13700 PF13411 MerR HTH family regulatory protein NDK36_13710 PF08240 Alcohol dehydrogenase GroES-like domain NDK36_13710 PF00107 Zinc-binding dehydrogenase NDK36_13715 PF01965 DJ-1/PfpI family NDK36_13720 PF08244 Glycosyl hydrolases family 32 C terminal NDK36_13720 PF00251 Glycosyl hydrolases family 32 N-terminal domain NDK36_13725 PF03613 PTS system mannose/fructose/sorbose family IID component NDK36_13730 PF03609 PTS system sorbose-specific iic component NDK36_13735 PF03830 PTS system sorbose subfamily IIB component NDK36_13740 PF03610 PTS system fructose IIA component NDK36_13745 PF00874 PRD domain NDK36_13745 PF00158 Sigma-54 interaction domain NDK36_13745 PF03610 PTS system fructose IIA component NDK36_13755 PF00324 Amino acid permease NDK36_13760 PF01810 LysE type translocator NDK36_13765 PF11495 Archaeal transcriptional regulator TrmB NDK36_13765 PF01978 Sugar-specific transcriptional regulator TrmB NDK36_13770 PF04542 Sigma-70 region 2 NDK36_13770 PF08281 Sigma-70, region 4 NDK36_13775 PF13739 Deacetylase PdaC NDK36_13775 PF11738 Protein of unknown function (DUF3298) NDK36_13785 PF14145 YrhK-like protein NDK36_13795 PF00440 Bacterial regulatory proteins, tetR family NDK36_13795 PF16295 Tetracyclin repressor-like, C-terminal domain NDK36_13800 PF08241 Methyltransferase domain NDK36_13810 PF09501 Probable sporulation protein (Bac_small_yrzI) NDK36_13815 PF01226 Formate/nitrite transporter NDK36_13820 PF10057 Uncharacterized conserved protein (DUF2294) NDK36_13825 PF00037 4Fe-4S binding domain NDK36_13825 PF04879 Molybdopterin oxidoreductase Fe4S4 domain NDK36_13825 PF00384 Molybdopterin oxidoreductase NDK36_13825 PF01568 Molydopterin dinucleotide binding domain NDK36_13825 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region NDK36_13830 PF07849 Protein of unknown function (DUF1641) NDK36_13840 PF14143 YrhC-like protein NDK36_13845 PF01053 Cys/Met metabolism PLP-dependent enzyme NDK36_13850 PF00291 Pyridoxal-phosphate dependent enzyme NDK36_13855 PF01048 Phosphorylase superfamily NDK36_13860 PF13649 Methyltransferase domain NDK36_13865 PF10750 Protein of unknown function (DUF2536) NDK36_13870 PF07423 Domain of unknown function (DUF1510) NDK36_13875 PF03717 Penicillin-binding Protein dimerisation domain NDK36_13875 PF00905 Penicillin binding protein transpeptidase domain NDK36_13880 PF01272 Transcription elongation factor, GreA/GreB, C-term NDK36_13880 PF03449 Transcription elongation factor, N-terminal NDK36_13885 PF00485 Phosphoribulokinase / Uridine kinase family NDK36_13890 PF01136 Peptidase family U32 NDK36_13890 PF16325 Peptidase family U32 C-terminal domain NDK36_13895 PF01136 Peptidase family U32 NDK36_13900 PF01596 O-methyltransferase NDK36_13905 PF02618 YceG-like family NDK36_13910 PF06949 Protein of unknown function (DUF1292) NDK36_13915 PF03652 Holliday junction resolvase NDK36_13920 PF06135 IreB regulatory phosphoprotein NDK36_13925 PF02272 DHHA1 domain NDK36_13925 PF01411 tRNA synthetases class II (A) NDK36_13925 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain NDK36_13930 PF01594 AI-2E family transporter NDK36_13935 PF00005 ABC transporter NDK36_13940 PF00497 Bacterial extracellular solute-binding proteins, family 3 NDK36_13945 PF00528 Binding-protein-dependent transport system inner membrane component NDK36_13950 PF00528 Binding-protein-dependent transport system inner membrane component NDK36_13955 PF13056 Protein of unknown function (DUF3918) NDK36_13965 PF05239 PRC-barrel domain NDK36_13970 PF13538 UvrD-like helicase C-terminal domain NDK36_13970 PF14490 Helix-hairpin-helix containing domain NDK36_13970 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain NDK36_13975 PF13181 Tetratricopeptide repeat NDK36_13975 PF07719 Tetratricopeptide repeat NDK36_13985 PF00266 Aminotransferase class-V NDK36_13990 PF02082 Transcriptional regulator NDK36_13995 PF16193 AAA C-terminal domain NDK36_13995 PF12002 MgsA AAA+ ATPase C terminal NDK36_13995 PF05496 Holliday junction DNA helicase RuvB P-loop domain NDK36_14000 PF00899 ThiF family NDK36_14010 PF01336 OB-fold nucleic acid binding domain NDK36_14010 PF02938 GAD domain NDK36_14010 PF00152 tRNA synthetases class II (D, K and N) NDK36_14015 PF03129 Anticodon binding domain NDK36_14015 PF13393 Histidyl-tRNA synthetase NDK36_14020 PF17449 Uncharacterized YrzK-like NDK36_14025 PF01520 N-acetylmuramoyl-L-alanine amidase NDK36_14025 PF08239 Bacterial SH3 domain NDK36_14030 PF02580 D-Tyr-tRNA(Tyr) deacylase NDK36_14035 PF04607 Region found in RelA / SpoT proteins NDK36_14035 PF13291 ACT domain NDK36_14035 PF02824 TGS domain NDK36_14040 PF00156 Phosphoribosyl transferase domain NDK36_14045 PF10141 Single-strand DNA-specific exonuclease, C terminal domain NDK36_14045 PF02272 DHHA1 domain NDK36_14045 PF01368 DHH family NDK36_14045 PF17768 RecJ OB domain NDK36_14050 PF06305 Lipopolysaccharide assembly protein A domain NDK36_14055 PF02080 TrkA-C domain NDK36_14060 PF07549 SecD/SecF GG Motif NDK36_14060 PF02355 Protein export membrane protein NDK36_14065 PF13797 Post-transcriptional regulator NDK36_14070 PF01943 Polysaccharide biosynthesis protein NDK36_14070 PF14667 Polysaccharide biosynthesis C-terminal domain NDK36_14075 PF04239 Protein of unknown function (DUF421) NDK36_14080 PF12670 Protein of unknown function (DUF3792) NDK36_14085 PF02699 Preprotein translocase subunit NDK36_14090 PF01702 Queuine tRNA-ribosyltransferase NDK36_14095 PF02547 Queuosine biosynthesis protein NDK36_14100 PF11146 Protein of unknown function (DUF2905) NDK36_14105 PF05491 RuvB C-terminal winged helix domain NDK36_14105 PF05496 Holliday junction DNA helicase RuvB P-loop domain NDK36_14105 PF17864 RuvB AAA lid domain NDK36_14110 PF07499 RuvA, C-terminal domain NDK36_14110 PF01330 RuvA N terminal domain NDK36_14115 PF08955 BofC C-terminal domain NDK36_14115 PF08977 Bypass of Forespore C, N terminal NDK36_14120 PF07690 Major Facilitator Superfamily NDK36_14125 PF01408 Oxidoreductase family, NAD-binding Rossmann fold NDK36_14125 PF02894 Oxidoreductase family, C-terminal alpha/beta domain NDK36_14155 PF01235 Sodium:alanine symporter family NDK36_14160 PF01709 Transcriptional regulator NDK36_14165 PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) NDK36_14170 PF01476 LysM domain NDK36_14175 PF02445 Quinolinate synthetase A protein NDK36_14180 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain NDK36_14180 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain NDK36_14185 PF00890 FAD binding domain NDK36_14185 PF02910 Fumarate reductase flavoprotein C-term NDK36_14190 PF00266 Aminotransferase class-V NDK36_14195 PF08279 HTH domain NDK36_14195 PF02829 3H domain NDK36_14200 PF01842 ACT domain NDK36_14200 PF00800 Prephenate dehydratase NDK36_14205 PF01842 ACT domain NDK36_14210 PF09269 Domain of unknown function (DUF1967) NDK36_14210 PF01018 GTP1/OBG NDK36_14210 PF01926 50S ribosome-binding GTPase NDK36_14215 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain NDK36_14215 PF14682 Sporulation initiation phospho-transferase B, C-terminal NDK36_14225 PF01016 Ribosomal L27 protein NDK36_14230 PF04327 Cysteine protease Prp NDK36_14235 PF00829 Ribosomal prokaryotic L21 protein NDK36_14240 PF02163 Peptidase family M50 NDK36_14245 PF01551 Peptidase family M23 NDK36_14250 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain NDK36_14255 PF03775 Septum formation inhibitor MinC, C-terminal domain NDK36_14260 PF04093 rod shape-determining protein MreD NDK36_14265 PF04085 rod shape-determining protein MreC NDK36_14275 PF00633 Helix-hairpin-helix motif NDK36_14275 PF04002 RadC-like JAB domain NDK36_14280 PF02545 Maf-like protein NDK36_14285 PF05036 Sporulation related domain NDK36_14290 PF06750 Bacterial Peptidase A24 N-terminal domain NDK36_14290 PF01478 Type IV leader peptidase family NDK36_14295 PF02875 Mur ligase family, glutamate ligase domain NDK36_14295 PF08245 Mur ligase middle domain NDK36_14300 PF10458 Valyl tRNA synthetase tRNA binding arm NDK36_14300 PF08264 Anticodon-binding domain of tRNA NDK36_14300 PF00133 tRNA synthetases class I (I, L, M and V) NDK36_14315 PF01476 LysM domain NDK36_14320 PF00202 Aminotransferase class-III NDK36_14325 PF00490 Delta-aminolevulinic acid dehydratase NDK36_14330 PF02602 Uroporphyrinogen-III synthase HemD NDK36_14335 PF03900 Porphobilinogen deaminase, C-terminal domain NDK36_14335 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain NDK36_14340 PF01578 Cytochrome C assembly protein NDK36_14345 PF01488 Shikimate / quinate 5-dehydrogenase NDK36_14345 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain NDK36_14345 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain NDK36_14355 PF01926 50S ribosome-binding GTPase NDK36_14360 PF00004 ATPase family associated with various cellular activities (AAA) NDK36_14360 PF05362 Lon protease (S16) C-terminal proteolytic domain NDK36_14360 PF02190 ATP-dependent protease La (LON) substrate-binding domain NDK36_14365 PF00004 ATPase family associated with various cellular activities (AAA) NDK36_14365 PF05362 Lon protease (S16) C-terminal proteolytic domain NDK36_14370 PF07724 AAA domain (Cdc48 subfamily) NDK36_14370 PF10431 C-terminal, D2-small domain, of ClpB protein NDK36_14370 PF06689 ClpX C4-type zinc finger NDK36_14375 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase NDK36_14375 PF05697 Bacterial trigger factor protein (TF) NDK36_14375 PF05698 Bacterial trigger factor protein (TF) C-terminus NDK36_14385 PF00694 Aconitase C-terminal domain NDK36_14390 PF00330 Aconitase family (aconitate hydratase) NDK36_14395 PF00180 Isocitrate/isopropylmalate dehydrogenase NDK36_14400 PF00682 HMGL-like NDK36_14400 PF08502 LeuA allosteric (dimerisation) domain NDK36_14405 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain NDK36_14405 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain NDK36_14410 PF01842 ACT domain NDK36_14410 PF10369 Small subunit of acetolactate synthase NDK36_14415 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain NDK36_14415 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain NDK36_14415 PF00205 Thiamine pyrophosphate enzyme, central domain NDK36_14430 PF09557 Domain of unknown function (DUF2382) NDK36_14430 PF11181 Heat induced stress protein YflT NDK36_14445 PF01420 Type I restriction modification DNA specificity domain NDK36_14450 PF02384 N-6 DNA Methylase NDK36_14455 PF08463 EcoEI R protein C-terminal NDK36_14455 PF00271 Helicase conserved C-terminal domain NDK36_14455 PF04851 Type III restriction enzyme, res subunit NDK36_14455 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) NDK36_14475 PF00589 Phage integrase family NDK36_14475 PF02899 Phage integrase, N-terminal SAM-like domain NDK36_14485 PF12850 Calcineurin-like phosphoesterase superfamily domain NDK36_14490 PF01725 Ham1 family NDK36_14495 PF03725 3' exoribonuclease family, domain 2 NDK36_14495 PF01138 3' exoribonuclease family, domain 1 NDK36_14500 PF10646 Sporulation and spore germination NDK36_14505 PF01177 Asp/Glu/Hydantoin racemase NDK36_14510 PF01047 MarR family NDK36_14515 PF00196 Bacterial regulatory proteins, luxR family NDK36_14520 PF03061 Thioesterase superfamily NDK36_14525 PF13085 2Fe-2S iron-sulfur cluster binding domain NDK36_14525 PF13183 4Fe-4S dicluster domain NDK36_14530 PF00890 FAD binding domain NDK36_14530 PF02910 Fumarate reductase flavoprotein C-term NDK36_14535 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit NDK36_14540 PF10702 Protein of unknown function (DUF2507) NDK36_14545 PF00696 Amino acid kinase family NDK36_14545 PF01842 ACT domain NDK36_14545 PF13840 ACT domain NDK36_14550 PF01541 GIY-YIG catalytic domain NDK36_14550 PF02151 UvrB/uvrC motif NDK36_14550 PF08459 UvrC Helix-hairpin-helix N-terminal NDK36_14555 PF00085 Thioredoxin NDK36_14560 PF06964 Alpha-L-arabinofuranosidase C-terminal domain NDK36_14565 PF01012 Electron transfer flavoprotein domain NDK36_14565 PF00766 Electron transfer flavoprotein FAD-binding domain NDK36_14570 PF01012 Electron transfer flavoprotein domain NDK36_14575 PF00378 Enoyl-CoA hydratase/isomerase NDK36_14580 PF08359 YsiA-like protein, C-terminal region NDK36_14580 PF00440 Bacterial regulatory proteins, tetR family NDK36_14585 PF13193 AMP-binding enzyme C-terminal domain NDK36_14585 PF00501 AMP-binding enzyme NDK36_14590 PF03994 Domain of Unknown Function (DUF350) NDK36_14595 PF00488 MutS domain V NDK36_14595 PF01713 Smr domain NDK36_14600 PF14791 DNA polymerase beta thumb NDK36_14600 PF14716 Helix-hairpin-helix domain NDK36_14600 PF02811 PHP domain NDK36_14605 PF02674 Colicin V production protein NDK36_14610 PF05164 Cell division protein ZapA NDK36_14615 PF11858 Domain of unknown function (DUF3378) NDK36_14615 PF01351 Ribonuclease HII NDK36_14620 PF03483 B3/4 domain NDK36_14620 PF03484 tRNA synthetase B5 domain NDK36_14620 PF03147 Ferredoxin-fold anticodon binding domain NDK36_14620 PF01588 Putative tRNA binding domain NDK36_14620 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain NDK36_14625 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain NDK36_14625 PF01409 tRNA synthetases class II core domain (F) NDK36_14635 PF00588 SpoU rRNA Methylase family NDK36_14635 PF08032 RNA 2'-O ribose methyltransferase substrate binding NDK36_14640 PF14098 Small, acid-soluble spore protein I NDK36_14645 PF05651 Putative sugar diacid recognition NDK36_14645 PF17853 GGDEF-like domain NDK36_14645 PF13556 PucR C-terminal helix-turn-helix domain NDK36_14650 PF02913 FAD linked oxidases, C-terminal domain NDK36_14650 PF01565 FAD binding domain NDK36_14655 PF13183 4Fe-4S dicluster domain NDK36_14655 PF02754 Cysteine-rich domain NDK36_14660 PF12681 Glyoxalase-like domain NDK36_14670 PF02554 Carbon starvation protein CstA NDK36_14670 PF13722 5TM C-terminal transporter carbon starvation CstA NDK36_14675 PF06964 Alpha-L-arabinofuranosidase C-terminal domain NDK36_14680 PF00528 Binding-protein-dependent transport system inner membrane component NDK36_14685 PF00528 Binding-protein-dependent transport system inner membrane component NDK36_14690 PF01547 Bacterial extracellular solute-binding protein NDK36_14695 PF13685 Iron-containing alcohol dehydrogenase NDK36_14700 PF13344 Haloacid dehalogenase-like hydrolase NDK36_14705 PF00596 Class II Aldolase and Adducin N-terminal domain NDK36_14710 PF00370 FGGY family of carbohydrate kinases, N-terminal domain NDK36_14710 PF02782 FGGY family of carbohydrate kinases, C-terminal domain NDK36_14715 PF11762 L-arabinose isomerase C-terminal domain NDK36_14715 PF02610 L-arabinose isomerase NDK36_14725 PF05343 M42 glutamyl aminopeptidase NDK36_14735 PF06961 Protein of unknown function (DUF1294) NDK36_14740 PF00453 Ribosomal protein L20 NDK36_14745 PF01632 Ribosomal protein L35 NDK36_14750 PF00707 Translation initiation factor IF-3, C-terminal domain NDK36_14750 PF05198 Translation initiation factor IF-3, N-terminal domain NDK36_14760 PF04172 LrgB-like family NDK36_14765 PF03788 LrgA family NDK36_14770 PF04397 LytTr DNA-binding domain NDK36_14770 PF00072 Response regulator receiver domain NDK36_14775 PF07694 5TMR of 5TMR-LYT NDK36_14775 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NDK36_14775 PF06580 Histidine kinase NDK36_14780 PF13419 Haloacid dehalogenase-like hydrolase NDK36_14785 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) NDK36_14785 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain NDK36_14785 PF03129 Anticodon binding domain NDK36_14785 PF02824 TGS domain NDK36_14790 PF08812 YtxC-like family NDK36_14795 PF09335 SNARE associated Golgi protein NDK36_14800 PF07319 Primosomal protein DnaI N-terminus NDK36_14800 PF01695 IstB-like ATP binding protein NDK36_14805 PF07261 Replication initiation and membrane attachment NDK36_14810 PF03477 ATP cone domain NDK36_14815 PF02675 S-adenosylmethionine decarboxylase NDK36_14820 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain NDK36_14820 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain NDK36_14825 PF01638 HxlR-like helix-turn-helix NDK36_14830 PF07690 Major Facilitator Superfamily NDK36_14835 PF00248 Aldo/keto reductase family NDK36_14840 PF01121 Dephospho-CoA kinase NDK36_14845 PF02659 Putative manganese efflux pump NDK36_14850 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain NDK36_14850 PF06827 Zinc finger found in FPG and IleRS NDK36_14850 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain NDK36_14855 PF01367 5'-3' exonuclease, C-terminal SAM fold NDK36_14855 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain NDK36_14855 PF00476 DNA polymerase family A NDK36_14860 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NDK36_14860 PF00512 His Kinase A (phospho-acceptor) domain NDK36_14860 PF00989 PAS fold NDK36_14860 PF16736 Single Cache-like NDK36_14865 PF00486 Transcriptional regulatory protein, C terminal NDK36_14865 PF00072 Response regulator receiver domain NDK36_14870 PF00056 lactate/malate dehydrogenase, NAD binding domain NDK36_14870 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain NDK36_14875 PF00180 Isocitrate/isopropylmalate dehydrogenase NDK36_14880 PF00285 Citrate synthase, C-terminal domain NDK36_14885 PF04284 Protein of unknown function (DUF441) NDK36_14890 PF01594 AI-2E family transporter NDK36_14895 PF04186 FxsA cytoplasmic membrane protein NDK36_14900 PF00391 PEP-utilising enzyme, mobile domain NDK36_14900 PF00224 Pyruvate kinase, barrel domain NDK36_14900 PF02887 Pyruvate kinase, alpha/beta domain NDK36_14905 PF00365 Phosphofructokinase NDK36_14910 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit NDK36_14915 PF17848 Acetyl-coA carboxylase zinc finger domain NDK36_14915 PF01039 Carboxyl transferase domain NDK36_14920 PF00390 Malic enzyme, N-terminal domain NDK36_14920 PF03949 Malic enzyme, NAD binding domain NDK36_14925 PF17657 Bacterial DNA polymerase III alpha subunit finger domain NDK36_14925 PF14579 Helix-hairpin-helix motif NDK36_14925 PF02811 PHP domain NDK36_14925 PF01336 OB-fold nucleic acid binding domain NDK36_14925 PF07733 Bacterial DNA polymerase III alpha NTPase domain NDK36_14930 PF14034 Sporulation protein YtrH NDK36_14945 PF01368 DHH family NDK36_14945 PF02272 DHHA1 domain NDK36_14950 PF14007 YtpI-like protein NDK36_14955 PF07085 DRTGG domain NDK36_14955 PF00392 Bacterial regulatory proteins, gntR family NDK36_14955 PF03061 Thioesterase superfamily NDK36_14955 PF00571 CBS domain NDK36_14975 PF14698 Argininosuccinate lyase C-terminal NDK36_14975 PF00206 Lyase NDK36_14980 PF00764 Arginosuccinate synthase NDK36_14985 PF00994 Probable molybdopterin binding domain NDK36_14990 PF00871 Acetokinase family NDK36_15000 PF02384 N-6 DNA Methylase NDK36_15005 PF08534 Redoxin NDK36_15010 PF09579 Sporulation protein YtfJ (Spore_YtfJ) NDK36_15015 PF11167 Protein of unknown function (DUF2953) NDK36_15020 PF06271 RDD family NDK36_15025 PF01343 Peptidase family S49 NDK36_15030 PF01513 ATP-NAD kinase NDK36_15035 PF07969 Amidohydrolase family NDK36_15040 PF00501 AMP-binding enzyme NDK36_15040 PF13193 AMP-binding enzyme C-terminal domain NDK36_15045 PF00269 Small, acid-soluble spore proteins, alpha/beta type NDK36_15050 PF02926 THUMP domain NDK36_15050 PF02568 Thiamine biosynthesis protein (ThiI) NDK36_15055 PF00266 Aminotransferase class-V NDK36_15060 PF05525 Branched-chain amino acid transport protein NDK36_15065 PF06160 Septation ring formation regulator, EzrA NDK36_15070 PF02811 PHP domain NDK36_15075 PF00440 Bacterial regulatory proteins, tetR family NDK36_15080 PF13185 GAF domain NDK36_15085 PF00990 Diguanylate cyclase, GGDEF domain NDK36_15090 PF00163 Ribosomal protein S4/S9 N-terminal domain NDK36_15090 PF01479 S4 domain NDK36_15095 PF01479 S4 domain NDK36_15095 PF00579 tRNA synthetases class I (W and Y) NDK36_15100 PF00501 AMP-binding enzyme NDK36_15100 PF13193 AMP-binding enzyme C-terminal domain NDK36_15105 PF00583 Acetyltransferase (GNAT) family NDK36_15110 PF00571 CBS domain NDK36_15115 PF00850 Histone deacetylase domain NDK36_15120 PF13677 Membrane MotB of proton-channel complex MotA/MotB NDK36_15120 PF00691 OmpA family NDK36_15125 PF01618 MotA/TolQ/ExbB proton channel family NDK36_15130 PF00356 Bacterial regulatory proteins, lacI family NDK36_15135 PF01817 Chorismate mutase type II NDK36_15135 PF00793 DAHP synthetase I family NDK36_15140 PF11009 Protein of unknown function (DUF2847) NDK36_15145 PF12732 YtxH-like protein NDK36_15150 PF06103 Bacterial protein of unknown function (DUF948) NDK36_15155 PF08245 Mur ligase middle domain NDK36_15155 PF02875 Mur ligase family, glutamate ligase domain NDK36_15155 PF01225 Mur ligase family, catalytic domain NDK36_15160 PF09397 Ftsk gamma domain NDK36_15160 PF17854 FtsK alpha domain NDK36_15160 PF01580 FtsK/SpoIIIE family NDK36_15165 PF01588 Putative tRNA binding domain NDK36_15165 PF14794 Domain of unknown function (DUF4479) NDK36_15170 PF07285 Protein of unknown function (DUF1444) NDK36_15175 PF00085 Thioredoxin NDK36_15185 PF11071 Nucleoside 2-deoxyribosyltransferase YtoQ NDK36_15190 PF05343 M42 glutamyl aminopeptidase NDK36_15195 PF03413 Peptidase propeptide and YPEB domain NDK36_15200 PF00390 Malic enzyme, N-terminal domain NDK36_15200 PF03949 Malic enzyme, NAD binding domain NDK36_15205 PF00753 Metallo-beta-lactamase superfamily NDK36_15210 PF02390 Putative methyltransferase NDK36_15215 PF14165 YtzH-like protein NDK36_15220 PF01636 Phosphotransferase enzyme family NDK36_15225 PF17999 Pullulanase N1-terminal domain NDK36_15225 PF00128 Alpha amylase, catalytic domain NDK36_15225 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) NDK36_15230 PF00781 Diacylglycerol kinase catalytic domain NDK36_15245 PF00291 Pyridoxal-phosphate dependent enzyme NDK36_15250 PF01546 Peptidase family M20/M25/M40 NDK36_15255 PF00860 Permease family NDK36_15260 PF05975 Bacterial ABC transporter protein EcsB NDK36_15265 PF00005 ABC transporter NDK36_15270 PF08220 DeoR-like helix-turn-helix domain NDK36_15275 PF00849 RNA pseudouridylate synthase NDK36_15275 PF01479 S4 domain NDK36_15280 PF01943 Polysaccharide biosynthesis protein NDK36_15280 PF14667 Polysaccharide biosynthesis C-terminal domain NDK36_15290 PF02028 BCCT, betaine/carnitine/choline family transporter NDK36_15295 PF10957 Sporulation protein Cse60 NDK36_15315 PF07470 Glycosyl Hydrolase Family 88 NDK36_15320 PF00528 Binding-protein-dependent transport system inner membrane component NDK36_15330 PF13416 Bacterial extracellular solute-binding protein NDK36_15335 PF00528 Binding-protein-dependent transport system inner membrane component NDK36_15340 PF01370 NAD dependent epimerase/dehydratase family NDK36_15345 PF00067 Cytochrome P450 NDK36_15350 PF06968 Biotin and Thiamin Synthesis associated domain NDK36_15350 PF04055 Radical SAM superfamily NDK36_15360 PF00155 Aminotransferase class I and II NDK36_15365 PF00202 Aminotransferase class-III NDK36_15375 PF01738 Dienelactone hydrolase family NDK36_15380 PF00356 Bacterial regulatory proteins, lacI family NDK36_15385 PF01547 Bacterial extracellular solute-binding protein NDK36_15390 PF00528 Binding-protein-dependent transport system inner membrane component NDK36_15395 PF00528 Binding-protein-dependent transport system inner membrane component NDK36_15400 PF02056 Family 4 glycosyl hydrolase NDK36_15400 PF11975 Family 4 glycosyl hydrolase C-terminal domain NDK36_15405 PF00581 Rhodanese-like domain NDK36_15410 PF08264 Anticodon-binding domain of tRNA NDK36_15410 PF00133 tRNA synthetases class I (I, L, M and V) NDK36_15410 PF13603 Leucyl-tRNA synthetase, Domain 2 NDK36_15410 PF09334 tRNA synthetases class I (M) NDK36_15415 PF14074 Protein of unknown function (DUF4257) NDK36_15420 PF13426 PAS domain NDK36_15420 PF01740 STAS domain NDK36_15425 PF07690 Major Facilitator Superfamily NDK36_15430 PF04791 LMBR1-like membrane protein NDK36_15435 PF02687 FtsX-like permease family NDK36_15440 PF00005 ABC transporter NDK36_15445 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NDK36_15450 PF00072 Response regulator receiver domain NDK36_15450 PF00486 Transcriptional regulatory protein, C terminal NDK36_15455 PF02687 FtsX-like permease family NDK36_15455 PF12704 MacB-like periplasmic core domain NDK36_15460 PF00005 ABC transporter NDK36_15475 PF00005 ABC transporter NDK36_15480 PF00392 Bacterial regulatory proteins, gntR family NDK36_15490 PF10732 Protein of unknown function (DUF2524) NDK36_15495 PF04055 Radical SAM superfamily NDK36_15495 PF16199 Radical_SAM C-terminal domain NDK36_15500 PF06962 Putative rRNA methylase NDK36_15505 PF10776 Protein of unknown function (DUF2600) NDK36_15510 PF12146 Serine aminopeptidase, S33 NDK36_15515 PF00132 Bacterial transferase hexapeptide (six repeats) NDK36_15520 PF00324 Amino acid permease NDK36_15525 PF00733 Asparagine synthase NDK36_15525 PF13537 Glutamine amidotransferase domain NDK36_15530 PF02773 S-adenosylmethionine synthetase, C-terminal domain NDK36_15530 PF02772 S-adenosylmethionine synthetase, central domain NDK36_15530 PF00438 S-adenosylmethionine synthetase, N-terminal domain NDK36_15535 PF01293 Phosphoenolpyruvate carboxykinase NDK36_15540 PF10763 Protein of unknown function (DUF2584) NDK36_15545 PF00326 Prolyl oligopeptidase family NDK36_15555 PF00005 ABC transporter NDK36_15560 PF00528 Binding-protein-dependent transport system inner membrane component NDK36_15565 PF00293 NUDIX domain NDK36_15570 PF05105 Bacteriophage holin family NDK36_15575 PF00210 Ferritin-like domain NDK36_15585 PF13115 YtkA-like NDK36_15590 PF02664 S-Ribosylhomocysteinase (LuxS) NDK36_15595 PF01809 Putative membrane protein insertion efficiency factor NDK36_15600 PF00484 Carbonic anhydrase NDK36_15605 PF01197 Ribosomal protein L31 NDK36_15610 PF01654 Cytochrome bd terminal oxidase subunit I NDK36_15615 PF02322 Cytochrome bd terminal oxidase subunit II NDK36_15620 PF07561 Domain of Unknown Function (DUF1540) NDK36_15625 PF00950 ABC 3 transport family NDK36_15630 PF00950 ABC 3 transport family NDK36_15635 PF00005 ABC transporter NDK36_15640 PF01297 Zinc-uptake complex component A periplasmic NDK36_15645 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain NDK36_15645 PF13378 Enolase C-terminal domain-like NDK36_15650 PF13193 AMP-binding enzyme C-terminal domain NDK36_15650 PF00501 AMP-binding enzyme NDK36_15655 PF00378 Enoyl-CoA hydratase/isomerase NDK36_15660 PF00561 alpha/beta hydrolase fold NDK36_15665 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain NDK36_15665 PF16582 Middle domain of thiamine pyrophosphate NDK36_15665 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain NDK36_15670 PF00425 chorismate binding enzyme NDK36_15675 PF01258 Prokaryotic dksA/traR C4-type zinc finger NDK36_15680 PF00483 Nucleotidyl transferase NDK36_15685 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain NDK36_15685 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain NDK36_15685 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain NDK36_15690 PF01370 NAD dependent epimerase/dehydratase family NDK36_15695 PF13439 Glycosyltransferase Family 4 NDK36_15695 PF00534 Glycosyl transferases group 1 NDK36_15710 PF00534 Glycosyl transferases group 1 NDK36_15710 PF13439 Glycosyltransferase Family 4 NDK36_15715 PF01636 Phosphotransferase enzyme family NDK36_15720 PF03073 TspO/MBR family NDK36_15725 PF00343 Carbohydrate phosphorylase NDK36_15730 PF08323 Starch synthase catalytic domain NDK36_15730 PF00534 Glycosyl transferases group 1 NDK36_15735 PF00483 Nucleotidyl transferase NDK36_15740 PF00483 Nucleotidyl transferase NDK36_15745 PF00128 Alpha amylase, catalytic domain NDK36_15745 PF02806 Alpha amylase, C-terminal all-beta domain NDK36_15745 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) NDK36_15870 PF09515 Thiamine transporter protein (Thia_YuaJ) NDK36_15875 PF00583 Acetyltransferase (GNAT) family NDK36_15880 PF01145 SPFH domain / Band 7 family NDK36_15880 PF15975 Flotillin NDK36_15890 PF12867 DinB superfamily NDK36_15900 PF00465 Iron-containing alcohol dehydrogenase NDK36_15905 PF00171 Aldehyde dehydrogenase family NDK36_15915 PF17735 Biofilm surface layer A NDK36_15920 PF02080 TrkA-C domain NDK36_15920 PF02254 TrkA-N domain NDK36_15925 PF02386 Cation transport protein NDK36_15930 PF05360 yiaA/B two helix domain NDK36_15935 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase NDK36_15935 PF13457 GW (Gly-Tryp) dipeptide domain NDK36_15940 PF07690 Major Facilitator Superfamily NDK36_15945 PF05995 Cysteine dioxygenase type I NDK36_15955 PF02673 Bacitracin resistance protein BacA NDK36_15960 PF01594 AI-2E family transporter NDK36_15965 PF01408 Oxidoreductase family, NAD-binding Rossmann fold NDK36_15965 PF02894 Oxidoreductase family, C-terminal alpha/beta domain NDK36_15970 PF06134 L-rhamnose isomerase (RhaA) NDK36_15975 PF05336 L-rhamnose mutarotase NDK36_15980 PF00370 FGGY family of carbohydrate kinases, N-terminal domain NDK36_15980 PF02782 FGGY family of carbohydrate kinases, C-terminal domain NDK36_15985 PF00455 DeoR C terminal sensor domain NDK36_15985 PF08220 DeoR-like helix-turn-helix domain NDK36_15990 PF00596 Class II Aldolase and Adducin N-terminal domain NDK36_16000 PF02743 Cache domain NDK36_16000 PF00672 HAMP domain NDK36_16000 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NDK36_16010 PF02743 Cache domain NDK36_16010 PF00672 HAMP domain NDK36_16010 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NDK36_16025 PF01894 Uncharacterised protein family UPF0047 NDK36_16035 PF00128 Alpha amylase, catalytic domain NDK36_16035 PF16657 Maltogenic Amylase, C-terminal domain NDK36_16040 PF00571 CBS domain NDK36_16040 PF01595 Cyclin M transmembrane N-terminal domain NDK36_16040 PF03471 Transporter associated domain NDK36_16045 PF04298 Putative neutral zinc metallopeptidase NDK36_16055 PF11458 Membrane-integrating protein Mistic NDK36_16060 PF07885 Ion channel NDK36_16060 PF02254 TrkA-N domain NDK36_16065 PF08868 YugN-like family NDK36_16075 PF00342 Phosphoglucose isomerase NDK36_16080 PF00465 Iron-containing alcohol dehydrogenase NDK36_16085 PF00465 Iron-containing alcohol dehydrogenase NDK36_16090 PF04070 Domain of unknown function (DUF378) NDK36_16095 PF00575 S1 RNA binding domain NDK36_16100 PF00155 Aminotransferase class I and II NDK36_16105 PF01037 Lrp/AsnC ligand binding domain NDK36_16110 PF00561 alpha/beta hydrolase fold NDK36_16110 PF08386 TAP-like protein NDK36_16115 PF08958 Domain of unknown function (DUF1871) NDK36_16120 PF00155 Aminotransferase class I and II NDK36_16125 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NDK36_16125 PF00512 His Kinase A (phospho-acceptor) domain NDK36_16130 PF08810 Kinase associated protein B NDK36_16135 PF00929 Exonuclease NDK36_16145 PF07690 Major Facilitator Superfamily NDK36_16150 PF00912 Transglycosylase NDK36_16150 PF00905 Penicillin binding protein transpeptidase domain NDK36_16155 PF04134 Protein of unknown function, DUF393 NDK36_16160 PF17328 Family of unknown function (DUF5366) NDK36_16165 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain NDK36_16165 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NDK36_16165 PF00989 PAS fold NDK36_16165 PF17203 Single cache domain 3 NDK36_16170 PF00072 Response regulator receiver domain NDK36_16175 PF02608 ABC transporter substrate-binding protein PnrA-like NDK36_16180 PF00005 ABC transporter NDK36_16185 PF02653 Branched-chain amino acid transport system / permease component NDK36_16190 PF02653 Branched-chain amino acid transport system / permease component NDK36_16195 PF03390 2-hydroxycarboxylate transporter family NDK36_16205 PF13244 Domain of unknown function (DUF4040) NDK36_16205 PF00361 Proton-conducting membrane transporter NDK36_16205 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus NDK36_16210 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter NDK36_16215 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L NDK36_16220 PF00361 Proton-conducting membrane transporter NDK36_16225 PF01899 Na+/H+ ion antiporter subunit NDK36_16230 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) NDK36_16235 PF03334 Na+/H+ antiporter subunit NDK36_16240 PF03061 Thioesterase superfamily NDK36_16245 PF00072 Response regulator receiver domain NDK36_16245 PF00196 Bacterial regulatory proteins, luxR family NDK36_16250 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NDK36_16250 PF07730 Histidine kinase NDK36_16260 PF00348 Polyprenyl synthetase NDK36_16265 PF08181 DegQ (SacQ) family NDK36_16280 PF00563 EAL domain NDK36_16280 PF08668 HDOD domain NDK36_16285 PF17956 Nicotinate phosphoribosyltransferase C-terminal domain NDK36_16285 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain NDK36_16285 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family NDK36_16290 PF00857 Isochorismatase family NDK36_16295 PF07997 Protein of unknown function (DUF1694) NDK36_16300 PF14166 YueH-like protein NDK36_16305 PF10676 Spore germination protein gerPA/gerPF NDK36_16310 PF01594 AI-2E family transporter NDK36_16315 PF10049 Protein of unknown function (DUF2283) NDK36_16325 PF01966 HD domain NDK36_16330 PF00106 short chain dehydrogenase NDK36_16335 PF17355 Family of unknown function (DUF5383) NDK36_16345 PF01580 FtsK/SpoIIIE family NDK36_16345 PF12538 DNA transporter NDK36_16350 PF10140 WXG100 protein secretion system (Wss), protein YukC NDK36_16355 PF08817 WXG100 protein secretion system (Wss), protein YukD NDK36_16360 PF06013 Proteins of 100 residues with WXG NDK36_16365 PF06018 CodY GAF-like domain NDK36_16365 PF17853 GGDEF-like domain NDK36_16365 PF13556 PucR C-terminal helix-turn-helix domain NDK36_16370 PF01262 Alanine dehydrogenase/PNT, C-terminal domain NDK36_16370 PF05222 Alanine dehydrogenase/PNT, N-terminal domain NDK36_16375 PF10042 Uncharacterized conserved protein (DUF2278) NDK36_16380 PF03621 MbtH-like protein NDK36_16385 PF00550 Phosphopantetheine attachment site NDK36_16385 PF00501 AMP-binding enzyme NDK36_16385 PF00975 Thioesterase domain NDK36_16385 PF00668 Condensation domain NDK36_16385 PF13193 AMP-binding enzyme C-terminal domain NDK36_16390 PF00550 Phosphopantetheine attachment site NDK36_16390 PF00857 Isochorismatase family NDK36_16395 PF00501 AMP-binding enzyme NDK36_16395 PF13193 AMP-binding enzyme C-terminal domain NDK36_16400 PF00425 chorismate binding enzyme NDK36_16405 PF00106 short chain dehydrogenase NDK36_16410 PF00756 Putative esterase NDK36_16415 PF00174 Oxidoreductase molybdopterin binding domain NDK36_16420 PF02632 BioY family NDK36_16425 PF13726 Na+-H+ antiporter family NDK36_16425 PF03553 Na+/H+ antiporter family NDK36_16430 PF00883 Cytosol aminopeptidase family, catalytic domain NDK36_16430 PF02789 Cytosol aminopeptidase family, N-terminal domain NDK36_16435 PF02681 Divergent PAP2 family NDK36_16440 PF06725 3D domain NDK36_16445 PF14068 Putative membrane protein NDK36_16450 PF17302 Family of unknown function (DUF5351) NDK36_16455 PF07992 Pyridine nucleotide-disulphide oxidoreductase NDK36_16460 PF07992 Pyridine nucleotide-disulphide oxidoreductase NDK36_16470 PF00478 IMP dehydrogenase / GMP reductase domain NDK36_16475 PF04299 Putative FMN-binding domain NDK36_16480 PF00583 Acetyltransferase (GNAT) family NDK36_16590 PF00589 Phage integrase family NDK36_16600 PF00589 Phage integrase family NDK36_16600 PF02899 Phage integrase, N-terminal SAM-like domain NDK36_16605 PF01521 Iron-sulphur cluster biosynthesis NDK36_16610 PF01678 Diaminopimelate epimerase NDK36_16615 PF07662 Na+ dependent nucleoside transporter C-terminus NDK36_16615 PF01773 Na+ dependent nucleoside transporter N-terminus NDK36_16620 PF07293 Protein of unknown function (DUF1450) NDK36_16625 PF07992 Pyridine nucleotide-disulphide oxidoreductase NDK36_16630 PF07315 Protein of unknown function (DUF1462) NDK36_16635 PF01106 NifU-like domain NDK36_16640 PF07676 WD40-like Beta Propeller Repeat NDK36_16640 PF00326 Prolyl oligopeptidase family NDK36_16645 PF08544 GHMP kinases C terminal NDK36_16645 PF00288 GHMP kinases N terminal domain NDK36_16650 PF00291 Pyridoxal-phosphate dependent enzyme NDK36_16655 PF01842 ACT domain NDK36_16655 PF00742 Homoserine dehydrogenase NDK36_16655 PF03447 Homoserine dehydrogenase, NAD binding domain NDK36_16665 PF04608 Phosphatidylglycerophosphatase A NDK36_16670 PF13344 Haloacid dehalogenase-like hydrolase NDK36_16675 PF01934 Protein of unknown function DUF86 NDK36_16680 PF06265 Protein of unknown function (DUF1027) NDK36_16685 PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) NDK36_16690 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family NDK36_16690 PF04055 Radical SAM superfamily NDK36_16695 PF01551 Peptidase family M23 NDK36_16700 PF09560 Sporulation protein YunB (Spo_YunB) NDK36_16705 PF08827 Domain of unknown function (DUF1805) NDK36_16710 PF02872 5'-nucleotidase, C-terminal domain NDK36_16715 PF01925 Sulfite exporter TauE/SafE NDK36_16720 PF01904 Protein of unknown function DUF72 NDK36_16730 PF01979 Amidohydrolase family NDK36_16735 PF17853 GGDEF-like domain NDK36_16735 PF13556 PucR C-terminal helix-turn-helix domain NDK36_16735 PF07905 Purine catabolism regulatory protein-like family NDK36_16740 PF00860 Permease family NDK36_16745 PF00860 Permease family NDK36_16750 PF01014 Uricase NDK36_16750 PF09349 OHCU decarboxylase NDK36_16755 PF00576 HIUase/Transthyretin family NDK36_16760 PF09680 Family of unknown function NDK36_16765 PF00111 2Fe-2S iron-sulfur cluster binding domain NDK36_16765 PF01799 [2Fe-2S] binding domain NDK36_16770 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain NDK36_16770 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase NDK36_16775 PF00941 FAD binding domain in molybdopterin dehydrogenase NDK36_16780 PF12804 MobA-like NTP transferase domain NDK36_16785 PF13478 XdhC Rossmann domain NDK36_16785 PF02625 XdhC and CoxI family NDK36_16790 PF00266 Aminotransferase class-V NDK36_16795 PF01546 Peptidase family M20/M25/M40 NDK36_16805 PF04231 Endonuclease I NDK36_16810 PF17912 MalK OB fold domain NDK36_16810 PF03459 TOBE domain NDK36_16810 PF00005 ABC transporter NDK36_16815 PF00392 Bacterial regulatory proteins, gntR family NDK36_16815 PF07702 UTRA domain NDK36_16820 PF00294 pfkB family carbohydrate kinase NDK36_16830 PF00528 Binding-protein-dependent transport system inner membrane component NDK36_16835 PF01547 Bacterial extracellular solute-binding protein NDK36_16840 PF01380 SIS domain NDK36_16845 PF01541 GIY-YIG catalytic domain NDK36_16850 PF01266 FAD dependent oxidoreductase NDK36_16865 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily NDK36_16875 PF01458 Uncharacterized protein family (UPF0051) NDK36_16880 PF01592 NifU-like N terminal domain NDK36_16885 PF00266 Aminotransferase class-V NDK36_16890 PF01458 Uncharacterized protein family (UPF0051) NDK36_16895 PF00005 ABC transporter NDK36_16910 PF03180 NLPA lipoprotein NDK36_16915 PF00528 Binding-protein-dependent transport system inner membrane component NDK36_16920 PF09383 NIL domain NDK36_16920 PF00005 ABC transporter NDK36_16925 PF02036 SCP-2 sterol transfer family NDK36_16930 PF00085 Thioredoxin NDK36_16935 PF01751 Toprim domain NDK36_16940 PF10830 Protein of unknown function (DUF2553) NDK36_16945 PF01597 Glycine cleavage H-protein NDK36_16950 PF03960 ArsC family NDK36_16955 PF02770 Acyl-CoA dehydrogenase, middle domain NDK36_16955 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NDK36_16955 PF00441 Acyl-CoA dehydrogenase, C-terminal domain NDK36_16960 PF00108 Thiolase, N-terminal domain NDK36_16960 PF02803 Thiolase, C-terminal domain NDK36_16965 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain NDK36_16965 PF00378 Enoyl-CoA hydratase/isomerase NDK36_16965 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain NDK36_16970 PF14115 YuzL-like protein NDK36_16975 PF01619 Proline dehydrogenase NDK36_16985 PF07875 Coat F domain NDK36_16990 PF01047 MarR family NDK36_16995 PF07690 Major Facilitator Superfamily NDK36_17000 PF14552 Tautomerase enzyme NDK36_17010 PF03466 LysR substrate binding domain NDK36_17010 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NDK36_17020 PF00005 ABC transporter NDK36_17025 PF14039 YusW-like protein NDK36_17040 PF00005 ABC transporter NDK36_17075 PF00155 Aminotransferase class I and II NDK36_17085 PF00210 Ferritin-like domain NDK36_17090 PF13180 PDZ domain NDK36_17095 PF00072 Response regulator receiver domain NDK36_17095 PF00486 Transcriptional regulatory protein, C terminal NDK36_17100 PF00672 HAMP domain NDK36_17100 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NDK36_17100 PF00512 His Kinase A (phospho-acceptor) domain NDK36_17110 PF00440 Bacterial regulatory proteins, tetR family NDK36_17115 PF00206 Lyase NDK36_17115 PF10415 Fumarase C C-terminus NDK36_17120 PF13113 Protein of unknown function (DUF3970) NDK36_17125 PF03323 Bacillus/Clostridium GerA spore germination protein NDK36_17130 PF03845 Spore germination protein NDK36_17135 PF05504 Spore germination B3/ GerAC like, C-terminal NDK36_17140 PF00072 Response regulator receiver domain NDK36_17140 PF00196 Bacterial regulatory proteins, luxR family NDK36_17145 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NDK36_17145 PF07730 Histidine kinase NDK36_17145 PF00672 HAMP domain NDK36_17150 PF09922 Cell wall-active antibiotics response 4TMS YvqF NDK36_17155 PF13349 Putative adhesin NDK36_17160 PF04012 PspA/IM30 family NDK36_17170 PF07690 Major Facilitator Superfamily NDK36_17175 PF01923 Cobalamin adenosyltransferase NDK36_17180 PF00005 ABC transporter NDK36_17185 PF01032 FecCD transport family NDK36_17190 PF01497 Periplasmic binding protein NDK36_17195 PF00106 short chain dehydrogenase NDK36_17200 PF08450 SMP-30/Gluconolactonase/LRE-like region NDK36_17205 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NDK36_17205 PF00512 His Kinase A (phospho-acceptor) domain NDK36_17210 PF00072 Response regulator receiver domain NDK36_17210 PF00486 Transcriptional regulatory protein, C terminal NDK36_17225 PF12841 YvrJ protein family NDK36_17230 PF00190 Cupin NDK36_17235 PF14184 Regulatory protein YrvL NDK36_17240 PF02687 FtsX-like permease family NDK36_17240 PF12704 MacB-like periplasmic core domain NDK36_17245 PF00005 ABC transporter NDK36_17250 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion NDK36_17255 PF00005 ABC transporter NDK36_17260 PF01032 FecCD transport family NDK36_17265 PF01032 FecCD transport family NDK36_17270 PF01497 Periplasmic binding protein NDK36_17275 PF13520 Amino acid permease NDK36_17280 PF09575 Small spore protein J (Spore_SspJ) NDK36_17285 PF04307 LexA-binding, inner membrane-associated putative hydrolase NDK36_17290 PF00884 Sulfatase NDK36_17295 PF12728 Helix-turn-helix domain NDK36_17295 PF12727 PBP superfamily domain NDK36_17305 PF00528 Binding-protein-dependent transport system inner membrane component NDK36_17310 PF00248 Aldo/keto reductase family NDK36_17320 PF00999 Sodium/hydrogen exchanger family NDK36_17325 PF01077 Nitrite and sulphite reductase 4Fe-4S domain NDK36_17325 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain NDK36_17330 PF00667 FAD binding domain NDK36_17330 PF00258 Flavodoxin NDK36_17330 PF00175 Oxidoreductase NAD-binding domain NDK36_17335 PF13538 UvrD-like helicase C-terminal domain NDK36_17345 PF03458 UPF0126 domain NDK36_17350 PF02600 Disulfide bond formation protein DsbB NDK36_17355 PF13462 Thioredoxin NDK36_17360 PF00403 Heavy-metal-associated domain NDK36_17365 PF00403 Heavy-metal-associated domain NDK36_17370 PF00403 Heavy-metal-associated domain NDK36_17375 PF02583 Metal-sensitive transcriptional repressor NDK36_17380 PF01408 Oxidoreductase family, NAD-binding Rossmann fold NDK36_17380 PF02894 Oxidoreductase family, C-terminal alpha/beta domain NDK36_17400 PF00893 Small Multidrug Resistance protein NDK36_17405 PF00440 Bacterial regulatory proteins, tetR family NDK36_17410 PF00106 short chain dehydrogenase NDK36_17420 PF14410 HNH/ENDO VII superfamily nuclease with conserved GHE residues NDK36_17420 PF14449 Pre-toxin TG NDK36_17420 PF04740 LXG domain of WXG superfamily NDK36_17435 PF01510 N-acetylmuramoyl-L-alanine amidase NDK36_17435 PF01476 LysM domain NDK36_17435 PF01471 Putative peptidoglycan binding domain NDK36_17440 PF05105 Bacteriophage holin family NDK36_17465 PF05257 CHAP domain NDK36_17465 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase NDK36_17595 PF09643 YopX protein NDK36_17630 PF17356 Phage-like element PBSX protein XtrA NDK36_17705 PF01668 SmpB protein NDK36_17710 PF17876 Cold shock domain NDK36_17710 PF00575 S1 RNA binding domain NDK36_17710 PF00773 RNB domain NDK36_17710 PF08206 Ribonuclease B OB domain NDK36_17715 PF12146 Serine aminopeptidase, S33 NDK36_17720 PF03840 Preprotein translocase SecG subunit NDK36_17725 PF00561 alpha/beta hydrolase fold NDK36_17730 PF01381 Helix-turn-helix NDK36_17745 PF01638 HxlR-like helix-turn-helix NDK36_17750 PF00672 HAMP domain NDK36_17750 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NDK36_17750 PF12729 Four helix bundle sensory module for signal transduction NDK36_17755 PF00528 Binding-protein-dependent transport system inner membrane component NDK36_17760 PF04069 Substrate binding domain of ABC-type glycine betaine transport system NDK36_17765 PF00528 Binding-protein-dependent transport system inner membrane component NDK36_17770 PF00005 ABC transporter NDK36_17770 PF00571 CBS domain NDK36_17775 PF12802 MarR family NDK36_17780 PF00528 Binding-protein-dependent transport system inner membrane component NDK36_17785 PF04069 Substrate binding domain of ABC-type glycine betaine transport system NDK36_17790 PF00528 Binding-protein-dependent transport system inner membrane component NDK36_17795 PF00571 CBS domain NDK36_17795 PF00005 ABC transporter NDK36_17800 PF12802 MarR family NDK36_17805 PF01914 MarC family integral membrane protein NDK36_17810 PF11724 YvbH-like oligomerisation region NDK36_17810 PF08000 Bacterial PH domain NDK36_17820 PF13240 zinc-ribbon domain NDK36_17825 PF00583 Acetyltransferase (GNAT) family NDK36_17830 PF00113 Enolase, C-terminal TIM barrel domain NDK36_17830 PF03952 Enolase, N-terminal domain NDK36_17835 PF06415 BPG-independent PGAM N-terminus (iPGM_N) NDK36_17835 PF01676 Metalloenzyme superfamily NDK36_17840 PF00121 Triosephosphate isomerase NDK36_17845 PF00162 Phosphoglycerate kinase NDK36_17850 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain NDK36_17850 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain NDK36_17855 PF04198 Putative sugar-binding domain NDK36_17860 PF00083 Sugar (and other) transporter NDK36_17865 PF00392 Bacterial regulatory proteins, gntR family NDK36_17870 PF00296 Luciferase-like monooxygenase NDK36_17875 PF03466 LysR substrate binding domain NDK36_17875 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NDK36_17880 PF00892 EamA-like transporter family NDK36_17885 PF00324 Amino acid permease NDK36_17895 PF02589 LUD domain NDK36_17900 PF02589 LUD domain NDK36_17900 PF11870 Domain of unknown function (DUF3390) NDK36_17900 PF13183 4Fe-4S dicluster domain NDK36_17905 PF02754 Cysteine-rich domain NDK36_17910 PF00196 Bacterial regulatory proteins, luxR family NDK36_17910 PF00072 Response regulator receiver domain NDK36_17915 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NDK36_17915 PF07730 Histidine kinase NDK36_17925 PF00005 ABC transporter NDK36_17945 PF12697 Alpha/beta hydrolase family NDK36_17950 PF13426 PAS domain NDK36_17950 PF07228 Stage II sporulation protein E (SpoIIE) NDK36_17955 PF07745 Glycosyl hydrolase family 53 NDK36_17960 PF02449 Beta-galactosidase NDK36_17960 PF08533 Beta-galactosidase C-terminal domain NDK36_17960 PF08532 Beta-galactosidase trimerisation domain NDK36_17965 PF00528 Binding-protein-dependent transport system inner membrane component NDK36_17970 PF00528 Binding-protein-dependent transport system inner membrane component NDK36_17975 PF13416 Bacterial extracellular solute-binding protein NDK36_17980 PF00356 Bacterial regulatory proteins, lacI family NDK36_17985 PF00392 Bacterial regulatory proteins, gntR family NDK36_17985 PF07729 FCD domain NDK36_17990 PF02652 L-lactate permease NDK36_17995 PF00309 Sigma-54 factor, Activator interacting domain (AID) NDK36_17995 PF04963 Sigma-54 factor, core binding domain NDK36_17995 PF04552 Sigma-54, DNA binding domain NDK36_18000 PF09628 YvfG protein NDK36_18005 PF04230 Polysaccharide pyruvyl transferase NDK36_18010 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family NDK36_18015 PF00132 Bacterial transferase hexapeptide (six repeats) NDK36_18015 PF17836 PglD N-terminal domain NDK36_18020 PF02397 Bacterial sugar transferase NDK36_18025 PF14667 Polysaccharide biosynthesis C-terminal domain NDK36_18025 PF01943 Polysaccharide biosynthesis protein NDK36_18030 PF00535 Glycosyl transferase family 2 NDK36_18035 PF04230 Polysaccharide pyruvyl transferase NDK36_18040 PF00535 Glycosyl transferase family 2 NDK36_18050 PF13439 Glycosyltransferase Family 4 NDK36_18050 PF00534 Glycosyl transferases group 1 NDK36_18055 PF00535 Glycosyl transferase family 2 NDK36_18060 PF13439 Glycosyltransferase Family 4 NDK36_18060 PF00534 Glycosyl transferases group 1 NDK36_18065 PF02719 Polysaccharide biosynthesis protein NDK36_18070 PF13614 AAA domain NDK36_18075 PF02706 Chain length determinant protein NDK36_18080 PF01381 Helix-turn-helix NDK36_18080 PF08671 Anti-repressor SinI NDK36_18085 PF00135 Carboxylesterase family NDK36_18095 PF05870 Phenolic acid decarboxylase (PAD) NDK36_18110 PF01177 Asp/Glu/Hydantoin racemase NDK36_18120 PF02435 Levansucrase/Invertase NDK36_18125 PF08244 Glycosyl hydrolases family 32 C terminal NDK36_18125 PF00251 Glycosyl hydrolases family 32 N-terminal domain NDK36_18130 PF13520 Amino acid permease NDK36_18135 PF17934 Tetracyclin repressor-like, C-terminal domain NDK36_18135 PF00440 Bacterial regulatory proteins, tetR family NDK36_18140 PF00893 Small Multidrug Resistance protein NDK36_18145 PF00893 Small Multidrug Resistance protein NDK36_18165 PF01580 FtsK/SpoIIIE family NDK36_18185 PF01510 N-acetylmuramoyl-L-alanine amidase NDK36_18185 PF01476 LysM domain NDK36_18185 PF01471 Putative peptidoglycan binding domain NDK36_18190 PF10960 BhlA holin family NDK36_18220 PF13457 GW (Gly-Tryp) dipeptide domain NDK36_18220 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase NDK36_18300 PF00589 Phage integrase family NDK36_18405 PF00589 Phage integrase family NDK36_18405 PF02899 Phage integrase, N-terminal SAM-like domain NDK36_18415 PF00574 Clp protease NDK36_18420 PF13419 Haloacid dehalogenase-like hydrolase NDK36_18425 PF16657 Maltogenic Amylase, C-terminal domain NDK36_18425 PF00128 Alpha amylase, catalytic domain NDK36_18430 PF03636 Glycosyl hydrolase family 65, N-terminal domain NDK36_18430 PF03632 Glycosyl hydrolase family 65 central catalytic domain NDK36_18430 PF03633 Glycosyl hydrolase family 65, C-terminal domain NDK36_18435 PF06691 Protein of unknown function (DUF1189) NDK36_18440 PF00528 Binding-protein-dependent transport system inner membrane component NDK36_18445 PF00528 Binding-protein-dependent transport system inner membrane component NDK36_18450 PF13416 Bacterial extracellular solute-binding protein NDK36_18455 PF00128 Alpha amylase, catalytic domain NDK36_18455 PF02903 Alpha amylase, N-terminal ig-like domain NDK36_18460 PF00356 Bacterial regulatory proteins, lacI family NDK36_18465 PF03641 Possible lysine decarboxylase NDK36_18475 PF00916 Sulfate permease family NDK36_18475 PF01740 STAS domain NDK36_18480 PF00484 Carbonic anhydrase NDK36_18485 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain NDK36_18485 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain NDK36_18490 PF02687 FtsX-like permease family NDK36_18495 PF00005 ABC transporter NDK36_18500 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NDK36_18505 PF00486 Transcriptional regulatory protein, C terminal NDK36_18505 PF00072 Response regulator receiver domain NDK36_18515 PF00797 N-acetyltransferase NDK36_18520 PF00381 PTS HPr component phosphorylation site NDK36_18525 PF02650 WhiA C-terminal HTH domain NDK36_18525 PF14527 WhiA LAGLIDADG-like domain NDK36_18525 PF10298 WhiA N-terminal LAGLIDADG-like domain NDK36_18530 PF01933 Uncharacterised protein family UPF0052 NDK36_18535 PF03668 P-loop ATPase protein family NDK36_18540 PF00293 NUDIX domain NDK36_18545 PF07992 Pyridine nucleotide-disulphide oxidoreductase NDK36_18550 PF00877 NlpC/P60 family NDK36_18560 PF00005 ABC transporter NDK36_18560 PF00664 ABC transporter transmembrane region NDK36_18580 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase NDK36_18580 PF01502 Phosphoribosyl-AMP cyclohydrolase NDK36_18585 PF00977 Histidine biosynthesis protein NDK36_18590 PF00977 Histidine biosynthesis protein NDK36_18595 PF00117 Glutamine amidotransferase class-I NDK36_18600 PF00475 Imidazoleglycerol-phosphate dehydratase NDK36_18605 PF00815 Histidinol dehydrogenase NDK36_18610 PF01634 ATP phosphoribosyltransferase NDK36_18615 PF13393 Histidyl-tRNA synthetase NDK36_18620 PF13529 Peptidase_C39 like family NDK36_18625 PF03211 Pectate lyase NDK36_18640 PF13419 Haloacid dehalogenase-like hydrolase NDK36_18645 PF07670 Nucleoside recognition NDK36_18650 PF01790 Prolipoprotein diacylglyceryl transferase NDK36_18655 PF07475 HPr Serine kinase C-terminal domain NDK36_18655 PF02603 HPr Serine kinase N terminus NDK36_18660 PF01979 Amidohydrolase family NDK36_18665 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase NDK36_18670 PF00392 Bacterial regulatory proteins, gntR family NDK36_18670 PF07702 UTRA domain NDK36_18675 PF00149 Calcineurin-like phosphoesterase NDK36_18690 PF04020 Mycobacterial 4 TMS phage holin, superfamily IV NDK36_18695 PF04024 PspC domain NDK36_18700 PF13349 Putative adhesin NDK36_18715 PF00669 Bacterial flagellin N-terminal helical region NDK36_18715 PF00700 Bacterial flagellin C-terminal helical region NDK36_18720 PF17755 UvrA DNA-binding domain NDK36_18720 PF00005 ABC transporter NDK36_18720 PF17760 UvrA interaction domain NDK36_18725 PF02151 UvrB/uvrC motif NDK36_18725 PF04851 Type III restriction enzyme, res subunit NDK36_18725 PF00271 Helicase conserved C-terminal domain NDK36_18725 PF17757 UvrB interaction domain NDK36_18725 PF12344 Ultra-violet resistance protein B NDK36_18730 PF09964 Uncharacterized protein conserved in bacteria (DUF2198) NDK36_18735 PF00391 PEP-utilising enzyme, mobile domain NDK36_18735 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain NDK36_18740 PF00440 Bacterial regulatory proteins, tetR family NDK36_18745 PF07690 Major Facilitator Superfamily NDK36_18750 PF17820 PDZ domain NDK36_18755 PF17423 Swarming motility protein NDK36_18760 PF01471 Putative peptidoglycan binding domain NDK36_18760 PF17820 PDZ domain NDK36_18760 PF03572 Peptidase family S41 NDK36_18765 PF18075 FtsX extracellular domain NDK36_18765 PF02687 FtsX-like permease family NDK36_18770 PF00005 ABC transporter NDK36_18775 PF13442 Cytochrome C oxidase, cbb3-type, subunit III NDK36_18780 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 NDK36_18780 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) NDK36_18790 PF07516 SecA Wing and Scaffold domain NDK36_18790 PF01043 SecA preprotein cross-linking domain NDK36_18790 PF07517 SecA DEAD-like domain NDK36_18790 PF02810 SEC-C motif NDK36_18795 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein NDK36_18795 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus NDK36_18810 PF02561 Flagellar protein FliS NDK36_18815 PF02465 Flagellar hook-associated protein 2 N-terminus NDK36_18815 PF07195 Flagellar hook-associated protein 2 C-terminus NDK36_18815 PF07196 Flagellin hook IN motif NDK36_18820 PF03646 FlaG protein NDK36_18825 PF00700 Bacterial flagellin C-terminal helical region NDK36_18825 PF00669 Bacterial flagellin N-terminal helical region NDK36_18830 PF02599 Global regulator protein family NDK36_18835 PF02623 FliW protein NDK36_18845 PF00669 Bacterial flagellin N-terminal helical region NDK36_18845 PF00700 Bacterial flagellin C-terminal helical region NDK36_18850 PF06429 Flagellar basal body rod FlgEFG protein C-terminal NDK36_18850 PF00460 Flagella basal body rod protein NDK36_18855 PF05130 FlgN protein NDK36_18860 PF04316 Anti-sigma-28 factor, FlgM NDK36_18875 PF10719 Late competence development protein ComFB NDK36_18880 PF04851 Type III restriction enzyme, res subunit NDK36_18880 PF00271 Helicase conserved C-terminal domain NDK36_18885 PF02645 Uncharacterised protein, DegV family COG1307 NDK36_18890 PF00196 Bacterial regulatory proteins, luxR family NDK36_18890 PF00072 Response regulator receiver domain NDK36_18895 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NDK36_18895 PF07730 Histidine kinase NDK36_18895 PF05384 Sensor protein DegS NDK36_18900 PF09186 Domain of unknown function (DUF1949) NDK36_18900 PF01205 Uncharacterized protein family UPF0029 NDK36_18935 PF00005 ABC transporter NDK36_18945 PF00953 Glycosyl transferase family 4 NDK36_18955 PF00535 Glycosyl transferase family 2 NDK36_18960 PF02706 Chain length determinant protein NDK36_18965 PF04932 O-Antigen ligase NDK36_18970 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain NDK36_18970 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain NDK36_18970 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain NDK36_18975 PF13439 Glycosyltransferase Family 4 NDK36_18975 PF00534 Glycosyl transferases group 1 NDK36_18980 PF01943 Polysaccharide biosynthesis protein NDK36_18980 PF14667 Polysaccharide biosynthesis C-terminal domain NDK36_18985 PF02397 Bacterial sugar transferase NDK36_18990 PF01609 Transposase DDE domain NDK36_18995 PF04122 Putative cell wall binding repeat 2 NDK36_18995 PF01520 N-acetylmuramoyl-L-alanine amidase NDK36_19000 PF08486 Stage II sporulation protein NDK36_19000 PF04122 Putative cell wall binding repeat 2 NDK36_19030 PF02350 UDP-N-acetylglucosamine 2-epimerase NDK36_19035 PF00483 Nucleotidyl transferase NDK36_19050 PF01061 ABC-2 type transporter NDK36_19060 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase NDK36_19060 PF00535 Glycosyl transferase family 2 NDK36_19065 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase NDK36_19070 PF01467 Cytidylyltransferase-like NDK36_19075 PF03808 Glycosyl transferase WecB/TagA/CpsF family NDK36_19080 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase NDK36_19085 PF08239 Bacterial SH3 domain NDK36_19085 PF05036 Sporulation related domain NDK36_19085 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase NDK36_19090 PF01238 Phosphomannose isomerase type I NDK36_19095 PF03323 Bacillus/Clostridium GerA spore germination protein NDK36_19100 PF03845 Spore germination protein NDK36_19105 PF05504 Spore germination B3/ GerAC like, C-terminal NDK36_19115 PF03816 Cell envelope-related transcriptional attenuator domain NDK36_19125 PF00877 NlpC/P60 family NDK36_19135 PF09587 Bacterial capsule synthesis protein PGA_cap NDK36_19140 PF14102 Capsule biosynthesis CapC NDK36_19145 PF08245 Mur ligase middle domain NDK36_19150 PF00356 Bacterial regulatory proteins, lacI family NDK36_19155 PF00294 pfkB family carbohydrate kinase NDK36_19160 PF05025 RbsD / FucU transport protein family NDK36_19165 PF00005 ABC transporter NDK36_19170 PF02653 Branched-chain amino acid transport system / permease component NDK36_19175 PF13407 Periplasmic binding protein domain NDK36_19180 PF08239 Bacterial SH3 domain NDK36_19185 PF13031 Protein of unknown function (DUF3892) NDK36_19190 PF02525 Flavodoxin-like fold NDK36_19195 PF03306 Alpha-acetolactate decarboxylase NDK36_19200 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain NDK36_19200 PF00205 Thiamine pyrophosphate enzyme, central domain NDK36_19200 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain NDK36_19205 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NDK36_19205 PF03466 LysR substrate binding domain NDK36_19210 PF02040 Arsenical pump membrane protein NDK36_19225 PF08757 CotH kinase protein NDK36_19235 PF01613 Flavin reductase like domain NDK36_19240 PF13789 Domain of unknown function (DUF4181) NDK36_19250 PF01037 Lrp/AsnC ligand binding domain NDK36_19250 PF13404 AsnC-type helix-turn-helix domain NDK36_19255 PF02417 Chromate transporter NDK36_19260 PF02417 Chromate transporter NDK36_19270 PF03358 NADPH-dependent FMN reductase NDK36_19275 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NDK36_19275 PF03466 LysR substrate binding domain NDK36_19320 PF16888 Domain of unknown function (DUF5082) NDK36_19335 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain NDK36_19335 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain NDK36_19335 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain NDK36_19345 PF13614 AAA domain NDK36_19350 PF13807 G-rich domain on putative tyrosine kinase NDK36_19350 PF02706 Chain length determinant protein NDK36_19360 PF04434 SWIM zinc finger NDK36_19365 PF00271 Helicase conserved C-terminal domain NDK36_19365 PF12419 SNF2 Helicase protein NDK36_19365 PF00176 SNF2 family N-terminal domain NDK36_19375 PF08220 DeoR-like helix-turn-helix domain NDK36_19375 PF00455 DeoR C terminal sensor domain NDK36_19380 PF00436 Single-strand binding protein family NDK36_19390 PF14183 YwpF-like protein NDK36_19400 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NDK36_19400 PF06580 Histidine kinase NDK36_19405 PF01741 Large-conductance mechanosensitive channel, MscL NDK36_19410 PF07977 FabA-like domain NDK36_19415 PF18801 response regulator aspartate phosphatase H, N terminal NDK36_19420 PF06429 Flagellar basal body rod FlgEFG protein C-terminal NDK36_19420 PF00460 Flagella basal body rod protein NDK36_19425 PF06429 Flagellar basal body rod FlgEFG protein C-terminal NDK36_19425 PF00460 Flagella basal body rod protein NDK36_19435 PF12116 Stage III sporulation protein D NDK36_19445 PF01047 MarR family NDK36_19450 PF07690 Major Facilitator Superfamily NDK36_19455 PF13229 Right handed beta helix region NDK36_19460 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin NDK36_19465 PF07690 Major Facilitator Superfamily NDK36_19470 PF00857 Isochorismatase family NDK36_19480 PF00909 Ammonium Transporter Family NDK36_19485 PF00543 Nitrogen regulatory protein P-II NDK36_19490 PF01569 PAP2 superfamily NDK36_19495 PF04892 VanZ like family NDK36_19500 PF01551 Peptidase family M23 NDK36_19505 PF00583 Acetyltransferase (GNAT) family NDK36_19510 PF17319 Family of unknown function (DUF5362) NDK36_19515 PF03102 NeuB family NDK36_19515 PF08666 SAF domain NDK36_19520 PF17370 Family of unknown function (DUF5392) NDK36_19525 PF13091 PLD-like domain NDK36_19525 PF13396 Phospholipase_D-nuclease N-terminal NDK36_19530 PF13411 MerR HTH family regulatory protein NDK36_19530 PF07739 TipAS antibiotic-recognition domain NDK36_19535 PF17319 Family of unknown function (DUF5362) NDK36_19540 PF13460 NAD(P)H-binding NDK36_19545 PF02082 Transcriptional regulator NDK36_19550 PF00449 Urease alpha-subunit, N-terminal domain NDK36_19550 PF01979 Amidohydrolase family NDK36_19555 PF00699 Urease beta subunit NDK36_19560 PF00547 Urease, gamma subunit NDK36_19575 PF05532 CsbD-like NDK36_19585 PF17874 MalT-like TPR region NDK36_19585 PF18801 response regulator aspartate phosphatase H, N terminal NDK36_19590 PF04055 Radical SAM superfamily NDK36_19590 PF06463 Molybdenum Cofactor Synthesis C NDK36_19595 PF02634 FdhD/NarQ family NDK36_19605 PF00092 von Willebrand factor type A domain NDK36_19615 PF00092 von Willebrand factor type A domain NDK36_19620 PF08486 Stage II sporulation protein NDK36_19625 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) NDK36_19630 PF08680 TATA-box binding NDK36_19635 PF06612 Protein of unknown function (DUF1146) NDK36_19645 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain NDK36_19645 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain NDK36_19650 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain NDK36_19650 PF02874 ATP synthase alpha/beta family, beta-barrel domain NDK36_19655 PF00231 ATP synthase NDK36_19660 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain NDK36_19660 PF00306 ATP synthase alpha/beta chain, C terminal domain NDK36_19660 PF02874 ATP synthase alpha/beta family, beta-barrel domain NDK36_19665 PF00213 ATP synthase delta (OSCP) subunit NDK36_19670 PF00430 ATP synthase B/B' CF(0) NDK36_19675 PF00137 ATP synthase subunit C NDK36_19680 PF00119 ATP synthase A chain NDK36_19685 PF03899 ATP synthase I chain NDK36_19695 PF00464 Serine hydroxymethyltransferase NDK36_19700 PF04260 Protein of unknown function (DUF436) NDK36_19705 PF02502 Ribose/Galactose Isomerase NDK36_19710 PF01451 Low molecular weight phosphotyrosine protein phosphatase NDK36_19715 PF02659 Putative manganese efflux pump NDK36_19720 PF01300 Telomere recombination NDK36_19720 PF03481 Putative GTP-binding controlling metal-binding NDK36_19730 PF09551 Stage II sporulation protein R (spore_II_R) NDK36_19735 PF17094 Uncharacterised protein family (UPF0715) NDK36_19740 PF17247 Family of unknown function (DUF5316) NDK36_19745 PF05175 Methyltransferase small domain NDK36_19745 PF17827 PrmC N-terminal domain NDK36_19750 PF00472 RF-1 domain NDK36_19750 PF03462 PCRF domain NDK36_19755 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily NDK36_19760 PF13411 MerR HTH family regulatory protein NDK36_19765 PF03547 Membrane transport protein NDK36_19770 PF03949 Malic enzyme, NAD binding domain NDK36_19770 PF00390 Malic enzyme, N-terminal domain NDK36_19775 PF00265 Thymidine kinase NDK36_19780 PF01197 Ribosomal protein L31 NDK36_19785 PF07498 Rho termination factor, N-terminal domain NDK36_19785 PF07497 Rho termination factor, RNA-binding domain NDK36_19785 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain NDK36_19795 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded NDK36_19800 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) NDK36_19810 PF00923 Transaldolase/Fructose-6-phosphate aldolase NDK36_19815 PF01116 Fructose-bisphosphate aldolase class-II NDK36_19820 PF00072 Response regulator receiver domain NDK36_19825 PF10740 Domain of unknown function (DUF2529) NDK36_19830 PF00117 Glutamine amidotransferase class-I NDK36_19830 PF06418 CTP synthase N-terminus NDK36_19835 PF05066 HB1, ASXL, restriction endonuclease HTH domain NDK36_19840 PF02770 Acyl-CoA dehydrogenase, middle domain NDK36_19840 PF00441 Acyl-CoA dehydrogenase, C-terminal domain NDK36_19840 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NDK36_19845 PF13183 4Fe-4S dicluster domain NDK36_19845 PF02754 Cysteine-rich domain NDK36_19850 PF13091 PLD-like domain NDK36_19855 PF03851 UV-endonuclease UvdE NDK36_19865 PF01872 RibD C-terminal domain NDK36_19875 PF13396 Phospholipase_D-nuclease N-terminal NDK36_19875 PF13091 PLD-like domain NDK36_19885 PF02665 Nitrate reductase gamma subunit NDK36_19890 PF02613 Nitrate reductase delta subunit NDK36_19895 PF13247 4Fe-4S dicluster domain NDK36_19895 PF14711 Respiratory nitrate reductase beta C-terminal NDK36_19900 PF14710 Respiratory nitrate reductase alpha N-terminal NDK36_19900 PF01568 Molydopterin dinucleotide binding domain NDK36_19900 PF00384 Molybdopterin oxidoreductase NDK36_19910 PF14256 YwiC-like protein NDK36_19915 PF00325 Bacterial regulatory proteins, crp family NDK36_19915 PF00027 Cyclic nucleotide-binding domain NDK36_19920 PF07690 Major Facilitator Superfamily NDK36_19925 PF00750 tRNA synthetases class I (R) NDK36_19925 PF05746 DALR anticodon binding domain NDK36_19925 PF03485 Arginyl tRNA synthetase N terminal domain NDK36_19930 PF09148 Domain of unknown function (DUF1934) NDK36_19935 PF11420 Bacteriocin subtilosin A NDK36_19945 PF04055 Radical SAM superfamily NDK36_19945 PF05402 Coenzyme PQQ synthesis protein D (PqqD) NDK36_19945 PF13186 Iron-sulfur cluster-binding domain NDK36_19955 PF00005 ABC transporter NDK36_19965 PF05193 Peptidase M16 inactive domain NDK36_19970 PF00675 Insulinase (Peptidase family M16) NDK36_19990 PF18801 response regulator aspartate phosphatase H, N terminal NDK36_19995 PF11131 Rap-phr extracellular signalling NDK36_20005 PF00491 Arginase family NDK36_20010 PF17284 Spermidine synthase tetramerisation domain NDK36_20015 PF00905 Penicillin binding protein transpeptidase domain NDK36_20015 PF00912 Transglycosylase NDK36_20025 PF08741 YwhD family NDK36_20030 PF02163 Peptidase family M50 NDK36_20035 PF01361 Tautomerase enzyme NDK36_20040 PF01047 MarR family NDK36_20045 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain NDK36_20045 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) NDK36_20045 PF02824 TGS domain NDK36_20045 PF03129 Anticodon binding domain NDK36_20050 PF07690 Major Facilitator Superfamily NDK36_20055 PF02082 Transcriptional regulator NDK36_20065 PF01966 HD domain NDK36_20070 PF07293 Protein of unknown function (DUF1450) NDK36_20080 PF00892 EamA-like transporter family NDK36_20085 PF03099 Biotin/lipoate A/B protein ligase family NDK36_20090 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NDK36_20090 PF03466 LysR substrate binding domain NDK36_20095 PF01515 Phosphate acetyl/butaryl transferase NDK36_20100 PF06778 Chlorite dismutase NDK36_20110 PF00155 Aminotransferase class I and II NDK36_20115 PF07690 Major Facilitator Superfamily NDK36_20130 PF07883 Cupin domain NDK36_20140 PF07690 Major Facilitator Superfamily NDK36_20145 PF00324 Amino acid permease NDK36_20150 PF01546 Peptidase family M20/M25/M40 NDK36_20155 PF00171 Aldehyde dehydrogenase family NDK36_20160 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain NDK36_20160 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase NDK36_20165 PF17735 Biofilm surface layer A NDK36_20170 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase NDK36_20175 PF04321 RmlD substrate binding domain NDK36_20180 PF16363 GDP-mannose 4,6 dehydratase NDK36_20185 PF00483 Nucleotidyl transferase NDK36_20190 PF04101 Glycosyltransferase family 28 C-terminal domain NDK36_20195 PF02348 Cytidylyltransferase NDK36_20200 PF08666 SAF domain NDK36_20200 PF03102 NeuB family NDK36_20205 PF00583 Acetyltransferase (GNAT) family NDK36_20210 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family NDK36_20215 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase NDK36_20220 PF00535 Glycosyl transferase family 2 NDK36_20225 PF09671 Spore coat protein (Spore_GerQ) NDK36_20230 PF04241 Protein of unknown function (DUF423) NDK36_20235 PF00860 Permease family NDK36_20240 PF17261 Family of unknown function (DUF5327) NDK36_20245 PF00171 Aldehyde dehydrogenase family NDK36_20250 PF03167 Uracil DNA glycosylase superfamily NDK36_20255 PF00535 Glycosyl transferase family 2 NDK36_20260 PF08543 Phosphomethylpyrimidine kinase NDK36_20270 PF00251 Glycosyl hydrolases family 32 N-terminal domain NDK36_20270 PF08244 Glycosyl hydrolases family 32 C terminal NDK36_20275 PF00367 phosphotransferase system, EIIB NDK36_20275 PF02378 Phosphotransferase system, EIIC NDK36_20280 PF01226 Formate/nitrite transporter NDK36_20295 PF13860 FlgD Ig-like domain NDK36_20295 PF00082 Subtilase family NDK36_20295 PF05922 Peptidase inhibitor I9 NDK36_20295 PF02225 PA domain NDK36_20300 PF00296 Luciferase-like monooxygenase NDK36_20305 PF00881 Nitroreductase family NDK36_20310 PF01098 Cell cycle protein NDK36_20320 PF17368 Spore morphogenesis and germination YwcE NDK36_20325 PF03626 Prokaryotic Cytochrome C oxidase subunit IV NDK36_20330 PF00510 Cytochrome c oxidase subunit III NDK36_20335 PF00115 Cytochrome C and Quinol oxidase polypeptide I NDK36_20340 PF02790 Cytochrome C oxidase subunit II, transmembrane domain NDK36_20340 PF00116 Cytochrome C oxidase subunit II, periplasmic domain NDK36_20345 PF04226 Transglycosylase associated protein NDK36_20350 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain NDK36_20350 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain NDK36_20355 PF10509 Galactokinase galactose-binding signature NDK36_20355 PF08544 GHMP kinases C terminal NDK36_20355 PF00288 GHMP kinases N terminal domain NDK36_20360 PF04138 GtrA-like protein NDK36_20365 PF00440 Bacterial regulatory proteins, tetR family NDK36_20370 PF08671 Anti-repressor SinI NDK36_20375 PF04341 Protein of unknown function, DUF485 NDK36_20380 PF00474 Sodium:solute symporter family NDK36_20385 PF01323 DSBA-like thioredoxin domain NDK36_20390 PF10518 TAT (twin-arginine translocation) pathway signal sequence NDK36_20390 PF04261 Dyp-type peroxidase family NDK36_20395 PF09375 Imelysin NDK36_20400 PF03239 Iron permease FTR1 family NDK36_20405 PF02581 Thiamine monophosphate synthase NDK36_20410 PF02110 Hydroxyethylthiazole kinase family NDK36_20415 PF03466 LysR substrate binding domain NDK36_20415 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NDK36_20420 PF03788 LrgA family NDK36_20425 PF04172 LrgB-like family NDK36_20430 PF12832 MFS_1 like family NDK36_20435 PF09962 Uncharacterized conserved protein (DUF2196) NDK36_20440 PF10672 S-adenosylmethionine-dependent methyltransferase NDK36_20440 PF17785 PUA-like domain NDK36_20445 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily NDK36_20450 PF10924 Protein of unknown function (DUF2711) NDK36_20465 PF02378 Phosphotransferase system, EIIC NDK36_20465 PF00367 phosphotransferase system, EIIB NDK36_20470 PF03123 CAT RNA binding domain NDK36_20470 PF00874 PRD domain NDK36_20475 PF01501 Glycosyl transferase family 8 NDK36_20480 PF09529 Integral membrane protein (intg_mem_TP0381) NDK36_20485 PF01047 MarR family NDK36_20490 PF00579 tRNA synthetases class I (W and Y) NDK36_20490 PF01479 S4 domain NDK36_20495 PF04389 Peptidase family M28 NDK36_20495 PF02225 PA domain NDK36_20500 PF04607 Region found in RelA / SpoT proteins NDK36_20510 PF01040 UbiA prenyltransferase family NDK36_20520 PF12459 D-Ala-teichoic acid biosynthesis protein NDK36_20525 PF00501 AMP-binding enzyme NDK36_20525 PF13193 AMP-binding enzyme C-terminal domain NDK36_20530 PF03062 MBOAT, membrane-bound O-acyltransferase family NDK36_20535 PF00550 Phosphopantetheine attachment site NDK36_20540 PF04914 DltD protein NDK36_20550 PF01063 Amino-transferase class IV NDK36_20555 PF11975 Family 4 glycosyl hydrolase C-terminal domain NDK36_20555 PF02056 Family 4 glycosyl hydrolase NDK36_20560 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit NDK36_20565 PF02378 Phosphotransferase system, EIIC NDK36_20570 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit NDK36_20575 PF05043 Mga helix-turn-helix domain NDK36_20575 PF08279 HTH domain NDK36_20575 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 NDK36_20575 PF00874 PRD domain NDK36_20585 PF02245 Methylpurine-DNA glycosylase (MPG) NDK36_20590 PF06628 Catalase-related immune-responsive NDK36_20590 PF00199 Catalase NDK36_20595 PF07690 Major Facilitator Superfamily NDK36_20600 PF12679 ABC-2 family transporter protein NDK36_20605 PF13732 Domain of unknown function (DUF4162) NDK36_20605 PF00005 ABC transporter NDK36_20610 PF13396 Phospholipase_D-nuclease N-terminal NDK36_20620 PF17280 Family of unknown function (DUF5345) NDK36_20625 PF04542 Sigma-70 region 2 NDK36_20625 PF08281 Sigma-70, region 4 NDK36_20630 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin NDK36_20635 PF01256 Carbohydrate kinase NDK36_20640 PF00005 ABC transporter NDK36_20640 PF00664 ABC transporter transmembrane region NDK36_20645 PF00005 ABC transporter NDK36_20645 PF00664 ABC transporter transmembrane region NDK36_20650 PF02322 Cytochrome bd terminal oxidase subunit II NDK36_20655 PF01654 Cytochrome bd terminal oxidase subunit I NDK36_20660 PF03390 2-hydroxycarboxylate transporter family NDK36_20665 PF01435 Peptidase family M48 NDK36_20675 PF01522 Polysaccharide deacetylase NDK36_20680 PF17912 MalK OB fold domain NDK36_20680 PF03459 TOBE domain NDK36_20680 PF00005 ABC transporter NDK36_20685 PF13556 PucR C-terminal helix-turn-helix domain NDK36_20690 PF00171 Aldehyde dehydrogenase family NDK36_20695 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 NDK36_20695 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) NDK36_20700 PF16363 GDP-mannose 4,6 dehydratase NDK36_20710 PF07730 Histidine kinase NDK36_20715 PF00072 Response regulator receiver domain NDK36_20715 PF00196 Bacterial regulatory proteins, luxR family NDK36_20720 PF07687 Peptidase dimerisation domain NDK36_20720 PF01546 Peptidase family M20/M25/M40 NDK36_20730 PF04525 LURP-one-related NDK36_20735 PF01717 Cobalamin-independent synthase, Catalytic domain NDK36_20740 PF01717 Cobalamin-independent synthase, Catalytic domain NDK36_20750 PF01144 Coenzyme A transferase NDK36_20755 PF01144 Coenzyme A transferase NDK36_20765 PF08241 Methyltransferase domain NDK36_20770 PF01773 Na+ dependent nucleoside transporter N-terminus NDK36_20770 PF07662 Na+ dependent nucleoside transporter C-terminus NDK36_20785 PF18011 C-terminal domain found in long catalases NDK36_20785 PF06628 Catalase-related immune-responsive NDK36_20785 PF00199 Catalase NDK36_20790 PF03600 Citrate transporter NDK36_20795 PF00722 Glycosyl hydrolases family 16 NDK36_20800 PF00874 PRD domain NDK36_20800 PF03123 CAT RNA binding domain NDK36_20810 PF11700 Vacuole effluxer Atg22 like NDK36_20815 PF00271 Helicase conserved C-terminal domain NDK36_20815 PF00270 DEAD/DEAH box helicase NDK36_20815 PF03880 DbpA RNA binding domain NDK36_20820 PF13472 GDSL-like Lipase/Acylhydrolase family NDK36_20835 PF14176 YxiJ-like protein NDK36_20855 PF10898 Protein of unknown function (DUF2716) NDK36_20930 PF14176 YxiJ-like protein NDK36_20935 PF05593 RHS Repeat NDK36_20940 PF00892 EamA-like transporter family NDK36_20950 PF10014 2OG-Fe dioxygenase NDK36_20955 PF00582 Universal stress protein family NDK36_20965 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 NDK36_20965 PF02378 Phosphotransferase system, EIIC NDK36_20965 PF00367 phosphotransferase system, EIIB NDK36_20985 PF14449 Pre-toxin TG NDK36_20985 PF04740 LXG domain of WXG superfamily NDK36_20995 PF16888 Domain of unknown function (DUF5082) NDK36_21000 PF08463 EcoEI R protein C-terminal NDK36_21000 PF00271 Helicase conserved C-terminal domain NDK36_21000 PF04851 Type III restriction enzyme, res subunit NDK36_21000 PF13588 Type I restriction enzyme R protein N terminus (HSDR_N) NDK36_21005 PF00293 NUDIX domain NDK36_21010 PF13086 AAA domain NDK36_21010 PF13087 AAA domain NDK36_21010 PF13195 Protein of unknown function (DUF4011) NDK36_21015 PF16369 C-terminal lipocalin-like domain NDK36_21015 PF04616 Glycosyl hydrolases family 43 NDK36_21030 PF02885 Glycosyl transferase family, helical bundle domain NDK36_21030 PF00591 Glycosyl transferase family, a/b domain NDK36_21030 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain NDK36_21035 PF07662 Na+ dependent nucleoside transporter C-terminus NDK36_21035 PF01773 Na+ dependent nucleoside transporter N-terminus NDK36_21040 PF01791 DeoC/LacD family aldolase NDK36_21045 PF04198 Putative sugar-binding domain NDK36_21050 PF06724 Domain of Unknown Function (DUF1206) NDK36_21055 PF04346 Ethanolamine utilisation protein, EutH NDK36_21060 PF03972 MmgE/PrpD family NDK36_21065 PF07687 Peptidase dimerisation domain NDK36_21065 PF01546 Peptidase family M20/M25/M40 NDK36_21070 PF00005 ABC transporter NDK36_21075 PF00528 Binding-protein-dependent transport system inner membrane component NDK36_21080 PF00497 Bacterial extracellular solute-binding proteins, family 3 NDK36_21085 PF00583 Acetyltransferase (GNAT) family NDK36_21090 PF00296 Luciferase-like monooxygenase NDK36_21095 PF02275 Linear amide C-N hydrolases, choloylglycine hydrolase family NDK36_21110 PF11631 Protein of unknown function (DUF3255) NDK36_21130 PF01497 Periplasmic binding protein NDK36_21135 PF06486 Protein of unknown function (DUF1093) NDK36_21150 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NDK36_21155 PF00072 Response regulator receiver domain NDK36_21155 PF00486 Transcriptional regulatory protein, C terminal NDK36_21160 PF01116 Fructose-bisphosphate aldolase class-II NDK36_21165 PF01261 Xylose isomerase-like TIM barrel NDK36_21170 PF01261 Xylose isomerase-like TIM barrel NDK36_21175 PF02894 Oxidoreductase family, C-terminal alpha/beta domain NDK36_21175 PF01408 Oxidoreductase family, NAD-binding Rossmann fold NDK36_21180 PF07690 Major Facilitator Superfamily NDK36_21185 PF01261 Xylose isomerase-like TIM barrel NDK36_21190 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain NDK36_21190 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain NDK36_21190 PF00205 Thiamine pyrophosphate enzyme, central domain NDK36_21195 PF00294 pfkB family carbohydrate kinase NDK36_21200 PF04962 KduI/IolB family NDK36_21205 PF00171 Aldehyde dehydrogenase family NDK36_21210 PF01609 Transposase DDE domain NDK36_21215 PF00455 DeoR C terminal sensor domain NDK36_21215 PF08220 DeoR-like helix-turn-helix domain NDK36_21220 PF00248 Aldo/keto reductase family NDK36_21250 PF00183 Hsp90 protein NDK36_21280 PF01609 Transposase DDE domain NDK36_21290 PF00005 ABC transporter NDK36_21290 PF03412 Peptidase C39 family NDK36_21290 PF00664 ABC transporter transmembrane region NDK36_21305 PF07883 Cupin domain NDK36_21310 PF00440 Bacterial regulatory proteins, tetR family NDK36_21315 PF00106 short chain dehydrogenase NDK36_21320 PF01047 MarR family NDK36_21325 PF03788 LrgA family NDK36_21330 PF04172 LrgB-like family NDK36_21335 PF04230 Polysaccharide pyruvyl transferase NDK36_21340 PF02595 Glycerate kinase family NDK36_21345 PF07729 FCD domain NDK36_21345 PF00392 Bacterial regulatory proteins, gntR family NDK36_21350 PF00370 FGGY family of carbohydrate kinases, N-terminal domain NDK36_21350 PF02782 FGGY family of carbohydrate kinases, C-terminal domain NDK36_21355 PF02447 GntP family permease NDK36_21360 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase NDK36_21360 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain NDK36_21365 PF00578 AhpC/TSA family NDK36_21370 PF13192 Thioredoxin domain NDK36_21370 PF07992 Pyridine nucleotide-disulphide oxidoreductase NDK36_21375 PF00232 Glycosyl hydrolase family 1 NDK36_21380 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 NDK36_21390 PF07702 UTRA domain NDK36_21390 PF00392 Bacterial regulatory proteins, gntR family NDK36_21400 PF00005 ABC transporter NDK36_21405 PF06874 Firmicute fructose-1,6-bisphosphatase NDK36_21415 PF00011 Hsp20/alpha crystallin family NDK36_21425 PF01695 IstB-like ATP binding protein NDK36_21430 PF00665 Integrase core domain NDK36_21445 PF00580 UvrD/REP helicase N-terminal domain NDK36_21445 PF13361 UvrD-like helicase C-terminal domain NDK36_21475 PF01527 Transposase NDK36_21510 PF02590 Predicted SPOUT methyltransferase NDK36_21515 PF14116 YyzF-like protein NDK36_21525 PF08240 Alcohol dehydrogenase GroES-like domain NDK36_21525 PF00107 Zinc-binding dehydrogenase NDK36_21535 PF10852 Protein of unknown function (DUF2651) NDK36_21550 PF00583 Acetyltransferase (GNAT) family NDK36_21555 PF18801 response regulator aspartate phosphatase H, N terminal NDK36_21565 PF00491 Arginase family NDK36_21570 PF00324 Amino acid permease NDK36_21575 PF00202 Aminotransferase class-III NDK36_21590 PF17418 Sporulation delaying protein SdpA NDK36_21595 PF07853 Protein of unknown function (DUF1648) NDK36_21595 PF13630 SdpI/YhfL protein family NDK36_21600 PF01022 Bacterial regulatory protein, arsR family NDK36_21605 PF02954 Bacterial regulatory protein, Fis family NDK36_21605 PF13426 PAS domain NDK36_21605 PF00158 Sigma-54 interaction domain NDK36_21620 PF13180 PDZ domain NDK36_21625 PF00753 Metallo-beta-lactamase superfamily NDK36_21630 PF09648 YycH protein NDK36_21635 PF07435 YycH protein NDK36_21640 PF00512 His Kinase A (phospho-acceptor) domain NDK36_21640 PF00672 HAMP domain NDK36_21640 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NDK36_21640 PF13426 PAS domain NDK36_21645 PF00072 Response regulator receiver domain NDK36_21645 PF00486 Transcriptional regulatory protein, C terminal NDK36_21670 PF00709 Adenylosuccinate synthetase NDK36_21675 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily NDK36_21680 PF03796 DnaB-like helicase C terminal domain NDK36_21680 PF00772 DnaB-like helicase N terminal domain NDK36_21685 PF09954 Uncharacterized protein conserved in bacteria (DUF2188) NDK36_21695 PF14174 YycC-like protein NDK36_21700 PF07690 Major Facilitator Superfamily NDK36_21705 PF13231 Dolichyl-phosphate-mannose-protein mannosyltransferase NDK36_21710 PF01281 Ribosomal protein L9, N-terminal domain NDK36_21710 PF03948 Ribosomal protein L9, C-terminal domain NDK36_21715 PF02272 DHHA1 domain NDK36_21715 PF01368 DHH family NDK36_21720 PF09991 Predicted membrane protein (DUF2232) NDK36_21735 PF01638 HxlR-like helix-turn-helix NDK36_21740 PF02833 DHHA2 domain NDK36_21740 PF01368 DHH family NDK36_21755 PF07690 Major Facilitator Superfamily NDK36_21760 PF13411 MerR HTH family regulatory protein NDK36_21760 PF06445 GyrI-like small molecule binding domain NDK36_21770 PF13474 SnoaL-like domain NDK36_21775 PF00805 Pentapeptide repeats (8 copies) NDK36_21790 PF01047 MarR family NDK36_21795 PF13673 Acetyltransferase (GNAT) domain NDK36_21805 PF00583 Acetyltransferase (GNAT) family NDK36_21810 PF04237 YjbR NDK36_21815 PF01872 RibD C-terminal domain NDK36_21825 PF06445 GyrI-like small molecule binding domain NDK36_21830 PF03190 Protein of unknown function, DUF255 NDK36_21835 PF02517 CPBP intramembrane metalloprotease NDK36_21840 PF00083 Sugar (and other) transporter NDK36_21845 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily NDK36_21850 PF00899 ThiF family NDK36_21855 PF00004 ATPase family associated with various cellular activities (AAA) NDK36_21855 PF07724 AAA domain (Cdc48 subfamily) NDK36_21855 PF17871 AAA lid domain NDK36_21855 PF02861 Clp amino terminal domain, pathogenicity island component NDK36_21855 PF10431 C-terminal, D2-small domain, of ClpB protein NDK36_21870 PF03372 Endonuclease/Exonuclease/phosphatase family NDK36_21875 PF01084 Ribosomal protein S18 NDK36_21880 PF00436 Single-strand binding protein family NDK36_21885 PF01250 Ribosomal protein S6 NDK36_21890 PF06071 Protein of unknown function (DUF933) NDK36_21890 PF01926 50S ribosome-binding GTPase NDK36_21895 PF04879 Molybdopterin oxidoreductase Fe4S4 domain NDK36_21895 PF01568 Molydopterin dinucleotide binding domain NDK36_21895 PF00384 Molybdopterin oxidoreductase NDK36_21900 PF06107 Bacterial protein of unknown function (DUF951) NDK36_21910 PF06866 Protein of unknown function (DUF1256) NDK36_21915 PF17762 HTH domain found in ParB protein NDK36_21915 PF02195 ParB-like nuclease domain NDK36_21920 PF13614 AAA domain NDK36_21925 PF06713 Bacterial PH domain NDK36_21930 PF17762 HTH domain found in ParB protein NDK36_21930 PF02195 ParB-like nuclease domain NDK36_21935 PF02527 rRNA small subunit methyltransferase G NDK36_21940 PF01134 Glucose inhibited division protein A NDK36_21940 PF13932 GidA associated domain NDK36_21945 PF12631 MnmE helical domain NDK36_21945 PF10396 GTP-binding protein TrmE N-terminus NDK36_21945 PF01926 50S ribosome-binding GTPase NDK36_21950 PF14804 Jag N-terminus NDK36_21950 PF01424 R3H domain NDK36_21955 PF02096 60Kd inner membrane protein NDK36_21960 PF00825 Ribonuclease P NDK36_21965 PF00468 Ribosomal protein L34 NDK36_21975 PF00565 Staphylococcal nuclease homologue NDK36_21990 PF01068 ATP dependent DNA ligase domain NDK36_22020 PF00589 Phage integrase family NDK36_22035 PF00436 Single-strand binding protein family NDK36_22065 PF13154 Protein of unknown function (DUF3991) NDK36_22185 PF00437 Type II/IV secretion system protein NDK36_22240 PF18801 response regulator aspartate phosphatase H, N terminal NDK36_22285 PF11799 impB/mucB/samB family C-terminal domain NDK36_22285 PF11798 IMS family HHH motif NDK36_22285 PF00817 impB/mucB/samB family NDK36_22385 PF01446 Replication protein NDK36_22395 PF10502 Signal peptidase, peptidase S26 NDK36_22400 PF01076 Plasmid recombination enzyme