locus-tag	class	description
NDK36_00005	COG0593	it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids
NDK36_00010	COG0592	DNA-directed DNA polymerase activity
NDK36_00015	COG2501	S4 domain
NDK36_00020	COG1195	it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
NDK36_00030	COG0187	DNA topoisomerase II activity
NDK36_00035	COG0188	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
NDK36_00070	COG0516	GMP reductase activity
NDK36_00070	COG0517	IMP dehydrogenase activity
NDK36_00075	COG1686	Belongs to the peptidase S11 family
NDK36_00080	COG0214	Catalyzes the formation of pyridoxal 5'-phosphate from ribose 5-phosphate (RBP), glyceraldehyde 3-phosphate (G3P) and ammonia. The ammonia is provided by the PdxT subunit. Can also use ribulose 5-phosphate and dihydroxyacetone phosphate as substrates, resulting from enzyme-catalyzed isomerization of RBP and G3P, respectively
NDK36_00085	COG0311	Catalyzes the hydrolysis of glutamine to glutamate and ammonia as part of the biosynthesis of pyridoxal 5'-phosphate. The resulting ammonia molecule is channeled to the active site of PdxS
NDK36_00090	COG0172	Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec)
NDK36_00100	COG1428	Deoxynucleoside kinase
NDK36_00105	COG1428	Deoxynucleoside kinase
NDK36_00110	COG1388	LysM domain
NDK36_00110	COG3858	chitin binding
NDK36_00115	COG1335	isochorismatase
NDK36_00120	COG0590	tRNA wobble adenosine to inosine editing
NDK36_00130	COG2812	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
NDK36_00135	COG0718	Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection
NDK36_00140	COG0353	May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO
NDK36_00185	COG4915	5-bromo-4-chloroindolyl phosphate hydrolysis protein
NDK36_00190	COG3853	Toxic anion resistance protein (TelA)
NDK36_00195	COG1982	Orn Lys Arg decarboxylase major
NDK36_00200	COG0125	Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
NDK36_00205	COG3870	Protein conserved in bacteria
NDK36_00210	COG1728	Protein conserved in bacteria
NDK36_00215	COG0470	DNA polymerase III
NDK36_00220	COG1774	PSP1 C-terminal conserved region
NDK36_00225	COG4467	Involved in initiation control of chromosome replication
NDK36_00230	COG4123	Specifically methylates the adenine in position 37 of tRNA(1)(Val) (anticodon cmo5UAC)
NDK36_00235	COG2827	Endonuclease containing a URI domain
NDK36_00240	COG0313	Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
NDK36_00245	COG2002	toxin-antitoxin pair type II binding
NDK36_00250	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
NDK36_00250	COG0143	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
NDK36_00255	COG0084	hydrolase, TatD family'
NDK36_00260	COG3583	domain protein
NDK36_00260	COG3584	3D domain protein
NDK36_00265	COG1658	Required for correct processing of both the 5' and 3' ends of 5S rRNA precursor. Cleaves both sides of a double-stranded region yielding mature 5S rRNA in one step
NDK36_00270	COG0030	16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase activity
NDK36_00280	COG4466	Protein conserved in bacteria
NDK36_00290	COG1947	Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol
NDK36_00295	COG0503	Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
NDK36_00300	COG0251	oxidation-reduction process
NDK36_00305	COG2088	sporulation resulting in formation of a cellular spore
NDK36_00310	COG1207	Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain
NDK36_00315	COG0462	Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
NDK36_00320	COG1825	This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance
NDK36_00325	COG0193	aminoacyl-tRNA hydrolase activity
NDK36_00335	COG1197	Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
NDK36_00340	COG2002	toxin-antitoxin pair type II binding
NDK36_00345	COG2244	polysaccharide biosynthetic process
NDK36_00350	COG3956	TIGRFAM MazG family protein
NDK36_00355	COG1188	Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit, (S4 paralog))
NDK36_00370	COG2919	Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic
NDK36_00375	COG1098	S1 RNA binding domain
NDK36_00390	COG2208	phosphoserine phosphatase activity
NDK36_00395	COG2304	oxidoreductase activity
NDK36_00400	COG0515	serine threonine protein kinase
NDK36_00405	COG0037	tRNA processing
NDK36_00410	COG0634	Belongs to the purine pyrimidine phosphoribosyltransferase family
NDK36_00415	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
NDK36_00420	COG1521	Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis
NDK36_00425	COG1281	Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress
NDK36_00430	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
NDK36_00435	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
NDK36_00440	COG0147	Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
NDK36_00445	COG0512	Glutamine amidotransferase of anthranilate synthase
NDK36_00450	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
NDK36_00455	COG0294	Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives
NDK36_00460	COG1539	Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin
NDK36_00465	COG0801	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
NDK36_00470	COG1396	sequence-specific DNA binding
NDK36_00475	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
NDK36_00480	COG1190	Belongs to the class-II aminoacyl-tRNA synthetase family
NDK36_00560	COG4463	regulation of RNA biosynthetic process
NDK36_00565	COG3880	PFAM UvrB UvrC protein
NDK36_00570	COG3869	Catalyzes the specific phosphorylation of arginine residues in
NDK36_00575	COG0542	response to heat
NDK36_00580	COG1066	DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function
NDK36_00585	COG1623	Has also diadenylate cyclase activity, catalyzing the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP). c- di-AMP acts as a signaling molecule that couples DNA integrity with progression of sporulation. The rise in c-di-AMP level generated by DisA while scanning the chromosome, operates as a positive signal that advances sporulation
NDK36_00590	COG4956	integral membrane protein (PIN domain superfamily)
NDK36_00595	COG1211	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity
NDK36_00600	COG0245	2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase activity
NDK36_00605	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
NDK36_00610	COG1045	serine acetyltransferase
NDK36_00615	COG0215	cysteine-tRNA ligase activity
NDK36_00620	COG1939	Involved in correct processing of both the 5' and 3' ends of 23S rRNA precursor. Processes 30S rRNA precursor transcript even in absence of ribonuclease 3 (Rnc)
NDK36_00625	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
NDK36_00630	COG3688	RNA-binding protein containing a PIN domain
NDK36_00635	COG1595	DNA-templated transcription, initiation
NDK36_00645	COG0690	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
NDK36_00650	COG0250	Participates in transcription elongation, termination and antitermination
NDK36_00660	COG0081	regulation of translation
NDK36_00665	COG0244	Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors
NDK36_00675	COG2813	Specifically methylates the guanine in position
NDK36_00680	COG0085	RNA polymerase activity
NDK36_00685	COG0086	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
NDK36_00690	COG1358	cellular component organization or biogenesis
NDK36_00695	COG0048	Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit
NDK36_00700	COG0049	tRNA binding
NDK36_00705	COG0480	Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
NDK36_00710	COG0050	This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
NDK36_00715	COG0596	Alpha beta hydrolase
NDK36_00725	COG0087	One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit
NDK36_00730	COG0088	Forms part of the polypeptide exit tunnel
NDK36_00740	COG0090	One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity
NDK36_00755	COG0092	Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation
NDK36_00760	COG0197	Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs
NDK36_00770	COG0186	One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA
NDK36_00775	COG0093	Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome
NDK36_00785	COG0094	This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits
NDK36_00795	COG0096	One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit
NDK36_00800	COG0097	This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center
NDK36_00805	COG0256	This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance
NDK36_00810	COG0098	Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body
NDK36_00820	COG0200	Binds to the 23S rRNA
NDK36_00825	COG0201	protein transport
NDK36_00830	COG0563	adenylate kinase activity
NDK36_00835	COG0024	Methionine aminopeptidase
NDK36_00840	COG2163	COG2163 Ribosomal protein L14E L6E L27E
NDK36_00850	COG0257	Belongs to the bacterial ribosomal protein bL36 family
NDK36_00855	COG0099	Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits
NDK36_00860	COG0100	Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome
NDK36_00865	COG0202	RNA polymerase activity
NDK36_00870	COG0203	ribosomal protein L17
NDK36_00875	COG1122	ATPase activity
NDK36_00880	COG1122	ATPase activity
NDK36_00885	COG0619	Transmembrane (T) component of an energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
NDK36_00890	COG0101	tRNA pseudouridine synthase activity
NDK36_00895	COG0102	This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly
NDK36_00900	COG0103	maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
NDK36_00905	COG2226	methyltransferase
NDK36_00915	COG0860	N-Acetylmuramoyl-L-alanine amidase
NDK36_00920	COG0489	protein tyrosine kinase activity
NDK36_00930	COG2194	sulfuric ester hydrolase activity
NDK36_00935	COG0726	polysaccharide deacetylase
NDK36_01005	COG0659	secondary active sulfate transmembrane transporter activity
NDK36_01010	COG0385	Bile acid
NDK36_01015	COG2819	hydrolase of the alpha beta superfamily
NDK36_01020	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
NDK36_01025	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
NDK36_01030	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
NDK36_01035	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
NDK36_01035	COG2207	Transcriptional regulator
NDK36_01040	COG3876	Protein conserved in bacteria
NDK36_01045	COG1472	Belongs to the glycosyl hydrolase 3 family
NDK36_01050	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
NDK36_01055	COG1263	PTS System
NDK36_01055	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
NDK36_01060	COG1737	Transcriptional regulator
NDK36_01065	COG2103	Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6- phosphate and D-lactate
NDK36_01070	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
NDK36_01075	COG1683	Conserved Protein
NDK36_01105	COG1595	DNA-templated transcription, initiation
NDK36_01110	COG5662	AntiSigma factor
NDK36_01115	COG1624	Catalyzes the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria
NDK36_01120	COG4856	YbbR-like protein
NDK36_01125	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
NDK36_01130	COG0449	glutamine-fructose-6-phosphate transaminase (isomerizing) activity
NDK36_01145	COG2169	Transcriptional regulator
NDK36_01150	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
NDK36_01155	COG1009	NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit
NDK36_01160	COG3002	Belongs to the UPF0753 family
NDK36_01165	COG0288	reversible hydration of carbon dioxide
NDK36_01175	COG5609	conserved protein (DUF2294)
NDK36_01185	COG0642	Histidine kinase
NDK36_01195	COG0515	serine threonine protein kinase
NDK36_01210	COG1113	amino acid transport
NDK36_01225	COG2602	Beta-lactamase
NDK36_01230	COG2124	cytochrome p450
NDK36_01240	COG0531	amino acid
NDK36_01245	COG0584	glycerophosphoryl diester phosphodiesterase
NDK36_01250	COG2271	Major facilitator Superfamily
NDK36_01260	COG0456	acetyltransferase
NDK36_01260	COG1846	Transcriptional regulator
NDK36_01275	COG3409	Peptidoglycan-binding domain 1 protein
NDK36_01280	COG0697	spore germination
NDK36_01285	COG1917	Cupin 2, conserved barrel domain protein
NDK36_01285	COG2207	Transcriptional regulator
NDK36_01310	COG0027	Involved in the de novo purine biosynthesis. Catalyzes the transfer of formate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR). Formate is provided by PurU via hydrolysis of 10-formyl-tetrahydrofolate
NDK36_01315	COG3591	Belongs to the peptidase S1B family
NDK36_01325	COG0596	Alpha beta hydrolase
NDK36_01330	COG1183	phosphatidylcholine synthase activity
NDK36_01335	COG0586	Pfam SNARE associated Golgi protein
NDK36_01340	COG0688	phosphatidylethanolamine metabolic process
NDK36_01350	COG2312	Erythromycin esterase
NDK36_01355	COG2207	Transcriptional regulator
NDK36_01360	COG1054	Belongs to the UPF0176 family
NDK36_01365	COG1301	dicarboxylic acid transport
NDK36_01370	COG1263	PTS System
NDK36_01370	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
NDK36_01370	COG2190	(PTS) system
NDK36_01375	COG0363	glucosamine-6-phosphate deaminase activity
NDK36_01380	COG2188	Transcriptional regulator
NDK36_01390	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
NDK36_01395	COG0833	amino acid
NDK36_01400	COG2040	homocysteine
NDK36_01410	COG2066	Belongs to the glutaminase family
NDK36_01415	COG4191	Histidine kinase
NDK36_01420	COG0784	Response regulator, receiver
NDK36_01425	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
NDK36_01430	COG1012	belongs to the aldehyde dehydrogenase family
NDK36_01435	COG2271	Major facilitator Superfamily
NDK36_01440	COG4948	Mandelate Racemase Muconate Lactonizing
NDK36_01445	COG2186	Transcriptional regulator
NDK36_01450	COG2721	sulfolactate sulfo-lyase activity
NDK36_01455	COG3173	Aminoglycoside phosphotransferase
NDK36_01465	COG0697	spore germination
NDK36_01470	COG0745	RESPONSE REGULATOR receiver
NDK36_01475	COG2205	protein histidine kinase activity
NDK36_01480	COG1131	(ABC) transporter
NDK36_01500	COG3773	Cell wall hydrolase
NDK36_01505	COG2304	oxidoreductase activity
NDK36_01515	COG3540	Alkaline phosphatase
NDK36_01520	COG1826	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
NDK36_01525	COG0805	protein transport
NDK36_01530	COG2039	Removes 5-oxoproline from various penultimate amino acid residues except L-proline
NDK36_01535	COG0520	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
NDK36_01540	COG0477	Major facilitator Superfamily
NDK36_01545	COG1309	transcriptional regulator
NDK36_01550	COG0252	asparaginase activity
NDK36_01555	COG1075	acetyltransferases and hydrolases with the alpha beta hydrolase fold
NDK36_01560	COG1714	RDD family
NDK36_01565	COG1405	negative regulation of cell septum assembly
NDK36_01565	COG3012	SEC-C Motif Domain Protein
NDK36_01575	COG3279	Response regulator of the LytR AlgR family
NDK36_01585	COG1668	transmembrane transport
NDK36_01590	COG0667	Aldo Keto reductase
NDK36_01605	COG1595	DNA-templated transcription, initiation
NDK36_01610	COG1595	DNA-templated transcription, initiation
NDK36_01615	COG1876	peptidase activity
NDK36_01625	COG1028	Short-chain dehydrogenase reductase Sdr
NDK36_01630	COG0366	Alpha amylase catalytic
NDK36_01635	COG0803	Belongs to the bacterial solute-binding protein 9 family
NDK36_01640	COG1121	(ABC) transporter
NDK36_01645	COG1108	ABC-type Mn2 Zn2 transport systems permease components
NDK36_01655	COG2310	stress, protein
NDK36_01660	COG2310	stress, protein
NDK36_01665	COG2310	stress, protein
NDK36_01670	COG0861	Integral membrane protein TerC family
NDK36_01680	COG3853	Toxic anion resistance protein (TelA)
NDK36_01690	COG0477	Major facilitator Superfamily
NDK36_01695	COG2814	Major facilitator Superfamily
NDK36_01700	COG0640	Transcriptional regulator
NDK36_01705	COG0517	IMP dehydrogenase activity
NDK36_01705	COG4175	Glycine betaine
NDK36_01710	COG4176	ABC-type proline glycine betaine transport system permease component
NDK36_01715	COG2113	Glycine betaine
NDK36_01720	COG1473	amidohydrolase
NDK36_01725	COG1288	antiporter activity
NDK36_01740	COG0039	L-malate dehydrogenase activity
NDK36_01755	COG3403	YqcI/YcgG family
NDK36_01770	COG0171	NAD+ synthase (glutamine-hydrolyzing) activity
NDK36_01775	COG1660	Displays ATPase and GTPase activities
NDK36_01780	COG0703	Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate
NDK36_01790	COG2226	methyltransferase
NDK36_01795	COG0583	DNA-binding transcription factor activity
NDK36_01800	COG3458	cephalosporin-C deacetylase activity
NDK36_01805	COG3541	Predicted nucleotidyltransferase
NDK36_01810	COG0506	proline dehydrogenase activity
NDK36_01815	COG1012	belongs to the aldehyde dehydrogenase family
NDK36_01820	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
NDK36_01825	COG2508	Transcriptional regulator
NDK36_01830	COG3689	TIGRFAM TIGR03943 family protein
NDK36_01835	COG0701	Predicted permease
NDK36_01840	COG2267	carboxylic ester hydrolase activity
NDK36_01845	COG0492	ferredoxin-NADP+ reductase activity
NDK36_01850	COG0007	Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme
NDK36_01850	COG1587	Uroporphyrinogen-III synthase
NDK36_01855	COG2146	nitrite reductase [NAD(P)H] activity
NDK36_01860	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
NDK36_01865	COG0243	molybdopterin cofactor binding
NDK36_01870	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
NDK36_01875	COG2223	nitrite transmembrane transporter activity
NDK36_01885	COG1376	ErfK ybiS ycfS ynhG family protein
NDK36_01900	COG0765	amino acid transport
NDK36_01905	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
NDK36_01915	COG1714	RDD family
NDK36_01925	COG1846	Transcriptional regulator
NDK36_01940	COG2723	6-phospho-beta-galactosidase activity
NDK36_01950	COG3209	COG3209 Rhs family protein
NDK36_01960	COG0794	Belongs to the SIS family. GutQ KpsF subfamily
NDK36_01965	COG0269	3-dehydro-L-gulonate-6-phosphate decarboxylase activity
NDK36_01970	COG1733	regulation of RNA biosynthetic process
NDK36_01975	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
NDK36_01995	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
NDK36_02000	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
NDK36_02005	COG3208	Thioesterase involved in non-ribosomal peptide biosynthesis
NDK36_02010	COG2814	Major facilitator Superfamily
NDK36_02020	COG0697	spore germination
NDK36_02025	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
NDK36_02035	COG2364	Membrane
NDK36_02040	COG1126	abc transporter atp-binding protein
NDK36_02045	COG0765	amino acid transport
NDK36_02050	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
NDK36_02055	COG0583	DNA-binding transcription factor activity
NDK36_02060	COG0163	prenyltransferase activity
NDK36_02065	COG0043	3-octaprenyl-4-hydroxybenzoate carboxy-lyase activity
NDK36_02080	COG0596	Alpha beta hydrolase
NDK36_02085	COG3104	oligopeptide transport
NDK36_02090	COG5434	Belongs to the glycosyl hydrolase 28 family
NDK36_02100	COG0697	spore germination
NDK36_02110	COG1457	Belongs to the purine-cytosine permease (2.A.39) family
NDK36_02115	COG1136	(ABC) transporter
NDK36_02120	COG0577	efflux transmembrane transporter activity
NDK36_02125	COG0745	RESPONSE REGULATOR receiver
NDK36_02130	COG3850	Histidine kinase
NDK36_02130	COG5002	protein histidine kinase activity
NDK36_02135	COG0457	Tetratricopeptide repeat
NDK36_02155	COG0527	aspartate kinase activity
NDK36_02160	COG4606	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
NDK36_02165	COG4605	iron ion homeostasis
NDK36_02170	COG4604	ABC transporter, ATP-binding protein
NDK36_02175	COG4607	ABC-type enterochelin transport system periplasmic component
NDK36_02185	COG2814	Major facilitator Superfamily
NDK36_02190	COG1309	transcriptional regulator
NDK36_02195	COG0778	Nitroreductase
NDK36_02200	COG1359	(4S)-4-hydroxy-5-phosphonooxypentane-2,3-dione isomerase activity
NDK36_02205	COG0640	Transcriptional regulator
NDK36_02210	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
NDK36_02215	COG0160	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
NDK36_02220	COG1012	belongs to the aldehyde dehydrogenase family
NDK36_02225	COG4975	Glucose uptake
NDK36_02230	COG1028	Short-chain dehydrogenase reductase Sdr
NDK36_02235	COG4549	nuclear export factor GLE1
NDK36_02240	COG1276	copper resistance
NDK36_02240	COG2372	response to copper ion
NDK36_02245	COG1349	DNA-binding transcription factor activity
NDK36_02255	COG2213	PTS system mannitol-specific
NDK36_02260	COG4668	phosphoenolpyruvate-dependent sugar phosphotransferase system
NDK36_02265	COG0246	Mannitol dehydrogenase
NDK36_02270	COG0473	3-isopropylmalate dehydrogenase activity
NDK36_02275	COG0681	Belongs to the peptidase S26 family
NDK36_02285	COG0764	3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity
NDK36_02295	COG0561	phosphatase activity
NDK36_02300	COG1540	5-oxoprolinase (ATP-hydrolyzing) activity
NDK36_02305	COG1914	H( )-stimulated, divalent metal cation uptake system
NDK36_02310	COG4336	lyase activity
NDK36_02315	COG2049	5-oxoprolinase (ATP-hydrolyzing) activity
NDK36_02320	COG1984	allophanate hydrolase subunit 2
NDK36_02325	COG1414	Transcriptional regulator
NDK36_02330	COG2755	lipolytic protein G-D-S-L family
NDK36_02340	COG2329	Antibiotic biosynthesis monooxygenase
NDK36_02345	COG0768	penicillin binding
NDK36_02350	COG4989	oxidoreductase activity
NDK36_02355	COG3711	transcriptional antiterminator
NDK36_02360	COG0318	PFAM AMP-dependent synthetase and ligase
NDK36_02365	COG2226	methyltransferase
NDK36_02370	COG1028	Short-chain dehydrogenase reductase Sdr
NDK36_02375	COG1917	Cupin 2, conserved barrel domain protein
NDK36_02380	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
NDK36_02385	COG3871	stress protein (general stress protein 26)
NDK36_02395	COG2814	Major facilitator Superfamily
NDK36_02400	COG1522	sequence-specific DNA binding
NDK36_02405	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
NDK36_02405	COG0551	DNA topoisomerase type I activity
NDK36_02410	COG0494	nUDIX hydrolase
NDK36_02415	COG0028	Belongs to the TPP enzyme family
NDK36_02440	COG1914	H( )-stimulated, divalent metal cation uptake system
NDK36_02445	COG2261	transglycosylase associated protein
NDK36_02450	COG4876	unkown
NDK36_02455	COG2217	Heavy metal translocating P-type atpase
NDK36_02460	COG3729	General stress protein
NDK36_02465	COG0662	Cupin 2, conserved barrel domain protein
NDK36_02470	COG2329	Antibiotic biosynthesis monooxygenase
NDK36_02475	COG3546	catalase activity
NDK36_02480	COG1638	TRAP-type C4-dicarboxylate transport system periplasmic component
NDK36_02485	COG3290	protein histidine kinase activity
NDK36_02490	COG4565	transcriptional regulatory protein
NDK36_02495	COG1301	dicarboxylic acid transport
NDK36_02500	COG0628	permease
NDK36_02510	COG1131	(ABC) transporter
NDK36_02515	COG1277	ABC-type transport system involved in multi-copper enzyme maturation permease component
NDK36_02525	COG1960	acyl-CoA dehydrogenase activity
NDK36_02540	COG0053	Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family
NDK36_02545	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
NDK36_02550	COG1181	Belongs to the D-alanine--D-alanine ligase family
NDK36_02555	COG0770	UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity
NDK36_02560	COG0513	Belongs to the DEAD box helicase family
NDK36_02565	COG3402	PFAM membrane-flanked domain
NDK36_02570	COG3428	Bacterial PH domain
NDK36_02575	COG0705	Rhomboid family
NDK36_02580	COG0736	holo-[acyl-carrier-protein] synthase activity
NDK36_02585	COG2834	Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane)
NDK36_02590	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
NDK36_02595	COG0864	Transcriptional regulator
NDK36_02600	COG2337	Toxic component of a toxin-antitoxin (TA) module
NDK36_02605	COG1366	Belongs to the anti-sigma-factor antagonist family
NDK36_02610	COG1366	Belongs to the anti-sigma-factor antagonist family
NDK36_02615	COG2172	sigma factor antagonist activity
NDK36_02620	COG2208	phosphoserine phosphatase activity
NDK36_02625	COG1366	Belongs to the anti-sigma-factor antagonist family
NDK36_02630	COG2172	sigma factor antagonist activity
NDK36_02635	COG1191	sigma factor activity
NDK36_02640	COG2208	phosphoserine phosphatase activity
NDK36_02655	COG1673	EVE domain
NDK36_02660	COG1846	Transcriptional regulator
NDK36_02665	COG2183	response to ionizing radiation
NDK36_02675	COG3091	SprT-like family
NDK36_02715	COG0582	viral genome integration into host DNA
NDK36_02720	COG2856	Zn peptidase
NDK36_02725	COG1396	sequence-specific DNA binding
NDK36_02755	COG1674	ftsk spoiiie
NDK36_02760	COG2946	Replication initiation factor
NDK36_02800	COG0433	COG0433 Predicted ATPase
NDK36_02810	COG5644	endopeptidase inhibitor activity
NDK36_02820	COG0741	lytic transglycosylase activity
NDK36_02820	COG0791	NLP P60 protein
NDK36_02835	COG0457	Tetratricopeptide repeat
NDK36_02875	COG0583	DNA-binding transcription factor activity
NDK36_02880	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
NDK36_02890	COG5444	nuclease activity
NDK36_02895	COG1476	TRANSCRIPTIONal
NDK36_02920	COG0693	protein deglycase activity
NDK36_02925	COG1278	Cold shock
NDK36_02930	COG1329	Transcriptional regulator
NDK36_02935	COG0697	spore germination
NDK36_02940	COG2207	Transcriptional regulator
NDK36_02940	COG1917	Cupin 2, conserved barrel domain protein
NDK36_02950	COG3708	Transcriptional regulator
NDK36_02950	COG2207	Transcriptional regulator
NDK36_02955	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
NDK36_02970	COG4430	Bacteriocin-protection, YdeI or OmpD-Associated
NDK36_02985	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
NDK36_02990	COG1309	transcriptional regulator
NDK36_02995	COG0697	spore germination
NDK36_03000	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
NDK36_03005	COG2030	dehydratase
NDK36_03010	COG3545	Serine hydrolase
NDK36_03020	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
NDK36_03025	COG0640	Transcriptional regulator
NDK36_03030	COG1055	Involved in arsenical resistance. Thought to form the channel of an arsenite pump
NDK36_03040	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
NDK36_03045	COG0697	spore germination
NDK36_03050	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
NDK36_03055	COG0076	glutamate decarboxylase activity
NDK36_03060	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
NDK36_03065	COG0640	Transcriptional regulator
NDK36_03070	COG2128	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
NDK36_03085	COG4585	Histidine kinase
NDK36_03090	COG2197	response regulator
NDK36_03095	COG2409	Drug exporters of the RND superfamily
NDK36_03100	COG0596	Alpha beta hydrolase
NDK36_03105	COG1811	Na channel or pump
NDK36_03110	COG4978	Transcriptional regulator
NDK36_03110	COG0789	Transcriptional regulator
NDK36_03115	COG0053	Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family
NDK36_03120	COG0778	Nitroreductase
NDK36_03125	COG0346	lactoylglutathione lyase activity
NDK36_03130	COG2259	Doxx family
NDK36_03135	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
NDK36_03165	COG2323	membrane
NDK36_03170	COG0071	Belongs to the small heat shock protein (HSP20) family
NDK36_03185	COG1309	transcriptional regulator
NDK36_03195	COG0456	acetyltransferase
NDK36_03200	COG0488	(ABC) transporter
NDK36_03205	COG1113	amino acid transport
NDK36_03210	COG2318	DinB family
NDK36_03215	COG1846	Transcriptional regulator
NDK36_03220	COG1033	growth of symbiont in host cell
NDK36_03220	COG2409	Drug exporters of the RND superfamily
NDK36_03225	COG0778	Nitroreductase
NDK36_03230	COG1846	Transcriptional regulator
NDK36_03235	COG2814	Major facilitator Superfamily
NDK36_03240	COG0730	response to heat
NDK36_03245	COG1802	Transcriptional regulator
NDK36_03250	COG1388	LysM domain
NDK36_03250	COG3858	chitin binding
NDK36_03255	COG1819	glycosyl
NDK36_03265	COG1785	Belongs to the alkaline phosphatase family
NDK36_03270	COG5646	InterPro IPR014922
NDK36_03280	COG0454	-acetyltransferase
NDK36_03285	COG1078	dGTPase activity
NDK36_03290	COG1388	LysM domain
NDK36_03295	COG2814	Major facilitator Superfamily
NDK36_03300	COG1440	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
NDK36_03315	COG2723	6-phospho-beta-galactosidase activity
NDK36_03320	COG2188	Transcriptional regulator
NDK36_03325	COG1940	carbohydrate kinase activity
NDK36_03335	COG4124	Belongs to the glycosyl hydrolase 26 family
NDK36_03380	COG0611	Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1
NDK36_03385	COG0802	atpase or kinase
NDK36_03390	COG1214	PFAM Peptidase M22, glycoprotease
NDK36_03395	COG0456	acetyltransferase
NDK36_03400	COG0533	Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction
NDK36_03405	COG0488	(ABC) transporter
NDK36_03410	COG0315	cyclic pyranopterin monophosphate synthase activity
NDK36_03415	COG2344	Modulates transcription in response to changes in cellular NADH NAD( ) redox state
NDK36_03420	COG1826	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
NDK36_03425	COG0805	protein transport
NDK36_03435	COG1266	CAAX protease self-immunity
NDK36_03445	COG0459	protein refolding
NDK36_03465	COG0457	Tetratricopeptide repeat
NDK36_03470	COG1063	alcohol dehydrogenase
NDK36_03475	COG2211	Major facilitator Superfamily
NDK36_03480	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
NDK36_03490	COG1198	Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
NDK36_03495	COG1512	COG1512 Beta-propeller domains of methanol dehydrogenase type
NDK36_03500	COG4260	virion core protein, lumpy skin disease virus
NDK36_03510	COG2814	Major facilitator Superfamily
NDK36_03515	COG1063	alcohol dehydrogenase
NDK36_03520	COG0797	Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides
NDK36_03525	COG0823	Involved in the tonB-independent uptake of proteins
NDK36_03545	COG2267	carboxylic ester hydrolase activity
NDK36_03555	COG2132	Multicopper oxidase
NDK36_03560	COG1113	amino acid transport
NDK36_03570	COG0053	Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family
NDK36_03575	COG0714	Associated with various cellular activities
NDK36_03580	COG1721	protein (some members contain a von Willebrand factor type A (vWA) domain
NDK36_03585	COG1305	Transglutaminase-like
NDK36_03590	COG0519	Catalyzes the synthesis of GMP from XMP
NDK36_03590	COG0518	GMP synthase (glutamine-hydrolyzing) activity
NDK36_03600	COG2252	PERMEase
NDK36_03605	COG3064	Membrane
NDK36_03615	COG4843	Uncharacterized protein conserved in bacteria (DUF2179)
NDK36_03625	COG0041	Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR)
NDK36_03630	COG0026	Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR)
NDK36_03635	COG0015	Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
NDK36_03640	COG0152	phosphoribosylaminoimidazolesuccinocarboxamide synthase activity
NDK36_03645	COG1828	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
NDK36_03650	COG0047	phosphoribosylformylglycinamidine synthase activity
NDK36_03655	COG0046	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
NDK36_03660	COG0034	Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine
NDK36_03665	COG0150	phosphoribosylformylglycinamidine cyclo-ligase activity
NDK36_03670	COG0299	Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate
NDK36_03675	COG0138	bifunctional purine biosynthesis protein purh
NDK36_03680	COG0151	Belongs to the GarS family
NDK36_03685	COG1522	sequence-specific DNA binding
NDK36_03690	COG0531	amino acid
NDK36_03700	COG1001	Belongs to the metallo-dependent hydrolases superfamily. Adenine deaminase family
NDK36_03705	COG1470	cell adhesion involved in biofilm formation
NDK36_03710	COG4496	protein, YerC YecD
NDK36_03715	COG0069	glutamate synthase activity
NDK36_03720	COG1646	35 carbon atoms) to the C3 hydroxyl of sn-glycerol-1-phosphate (G1P), producing heptaprenylglyceryl phosphate (HepGP). This reaction is an ether-bond-formation step in the biosynthesis of archaea-type G1P-based membrane lipids found in Bacillales
NDK36_03725	COG0210	DNA helicase
NDK36_03730	COG0272	DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
NDK36_03735	COG4851	CamS sex pheromone cAM373 precursor
NDK36_03745	COG2334	A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response
NDK36_03750	COG1285	pathogenesis
NDK36_03755	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
NDK36_03760	COG0721	Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
NDK36_03765	COG0154	amidase activity
NDK36_03770	COG0064	Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
NDK36_03780	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
NDK36_03785	COG1597	lipid kinase activity
NDK36_03790	COG2265	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
NDK36_03795	COG1961	COG1961 Site-specific recombinases, DNA invertase Pin homologs
NDK36_03820	COG5444	nuclease activity
NDK36_03830	COG0457	Tetratricopeptide repeat
NDK36_03840	COG0217	transcriptional regulatory protein
NDK36_03850	COG1309	transcriptional regulator
NDK36_03865	COG3546	catalase activity
NDK36_03870	COG0454	-acetyltransferase
NDK36_03880	COG5578	integral membrane protein
NDK36_03885	COG2972	Histidine kinase
NDK36_03895	COG1653	transport
NDK36_03900	COG1175	transmembrane transport
NDK36_03905	COG0395	ABC-type sugar transport system, permease component
NDK36_03910	COG4225	unsaturated rhamnogalacturonyl hydrolase activity
NDK36_03915	COG2207	Transcriptional regulator
NDK36_03920	COG2755	lipolytic protein G-D-S-L family
NDK36_03930	COG5578	integral membrane protein
NDK36_03935	COG3401	FG-GAP repeat protein
NDK36_03940	COG3401	FG-GAP repeat protein
NDK36_03945	COG2755	lipolytic protein G-D-S-L family
NDK36_03960	COG1653	transport
NDK36_03965	COG4209	transmembrane transport
NDK36_03970	COG0395	ABC-type sugar transport system, permease component
NDK36_03975	COG1486	melibiose metabolic process
NDK36_03980	COG2323	membrane
NDK36_03985	COG2329	Antibiotic biosynthesis monooxygenase
NDK36_03990	COG0346	lactoylglutathione lyase activity
NDK36_04005	COG5583	Uncharacterized small protein (DUF2292)
NDK36_04010	COG0670	Belongs to the BI1 family
NDK36_04025	COG3328	transposase activity
NDK36_04035	COG0369	Component of the sulfite reductase complex that catalyzes the 6-electron reduction of sulfite to sulfide. This is one of several activities required for the biosynthesis of L- cysteine from sulfate. The flavoprotein component catalyzes the electron flow from NADPH - FAD - FMN to the hemoprotein component
NDK36_04035	COG2124	cytochrome p450
NDK36_04040	COG1368	sulfuric ester hydrolase activity
NDK36_04045	COG1208	COG1208 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis translation initiation factor 2B, gamma epsilon subunits eIF-2Bgamma eIF-2Bepsilon
NDK36_04050	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
NDK36_04055	COG1442	glycosyl transferase family 8
NDK36_04060	COG1216	Glycosyl transferase, family 2
NDK36_04065	COG1442	glycosyl transferase family 8
NDK36_04070	COG2223	nitrite transmembrane transporter activity
NDK36_04075	COG1011	Hydrolase
NDK36_04080	COG0531	amino acid
NDK36_04085	COG1012	belongs to the aldehyde dehydrogenase family
NDK36_04090	COG0840	transmembrane signaling receptor activity
NDK36_04095	COG0488	(ABC) transporter
NDK36_04105	COG0789	Transcriptional regulator
NDK36_04110	COG2814	Major facilitator Superfamily
NDK36_04130	COG0488	(ABC) transporter
NDK36_04135	COG0513	Belongs to the DEAD box helicase family
NDK36_04145	COG3866	Pectate lyase
NDK36_04150	COG0471	metal ion transport
NDK36_04155	COG3290	protein histidine kinase activity
NDK36_04160	COG4565	transcriptional regulatory protein
NDK36_04165	COG3181	Tripartite tricarboxylate transporter family receptor
NDK36_04170	COG2851	Citrate transporter
NDK36_04175	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
NDK36_04180	COG4362	Belongs to the NOS family. Bacterial NOS oxygenase subfamily
NDK36_04185	COG1254	Belongs to the acylphosphatase family
NDK36_04190	COG2258	MOSC domain
NDK36_04210	COG0024	Methionine aminopeptidase
NDK36_04215	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
NDK36_04215	COG1263	PTS System
NDK36_04220	COG1368	sulfuric ester hydrolase activity
NDK36_04235	COG1115	amino acid carrier protein
NDK36_04250	COG1263	PTS System
NDK36_04250	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
NDK36_04255	COG0366	Alpha amylase catalytic
NDK36_04260	COG2188	Transcriptional regulator
NDK36_04265	COG0778	Nitroreductase
NDK36_04270	COG0737	Belongs to the 5'-nucleotidase family
NDK36_04275	COG0693	protein deglycase activity
NDK36_04285	COG2814	Major facilitator Superfamily
NDK36_04290	COG4840	Belongs to the UPF0435 family
NDK36_04295	COG0394	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
NDK36_04300	COG4980	gas vesicle protein
NDK36_04305	COG1295	ribonuclease BN
NDK36_04310	COG0477	Major facilitator Superfamily
NDK36_04315	COG0387	Pfam Sodium calcium exchanger
NDK36_04325	COG0668	transmembrane transport
NDK36_04330	COG0535	radical SAM domain protein
NDK36_04340	COG0726	polysaccharide deacetylase
NDK36_04345	COG2084	Dehydrogenase
NDK36_04350	COG0598	Magnesium transport protein CorA
NDK36_04355	COG0122	3-methyladenine DNA glycosylase 8-oxoguanine DNA glycosylase
NDK36_04360	COG2265	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
NDK36_04370	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
NDK36_04375	COG4637	Psort location Cytoplasmic, score
NDK36_04385	COG1071	oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor
NDK36_04390	COG0022	dehydrogenase e1 component
NDK36_04395	COG0508	dehydrogenase complex catalyzes the overall conversion of
NDK36_04400	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
NDK36_04405	COG3284	Transcriptional regulator
NDK36_04415	COG1742	UPF0060 membrane protein
NDK36_04440	COG4842	Belongs to the WXG100 family
NDK36_04445	COG1486	melibiose metabolic process
NDK36_04450	COG1737	Transcriptional regulator
NDK36_04455	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
NDK36_04455	COG1263	PTS System
NDK36_04460	COG5434	Belongs to the glycosyl hydrolase 28 family
NDK36_04465	COG1132	(ABC) transporter
NDK36_04470	COG1132	(ABC) transporter
NDK36_04475	COG2259	Doxx family
NDK36_04480	COG2514	catechol 2,3-dioxygenase activity
NDK36_04485	COG1917	Cupin 2, conserved barrel domain protein
NDK36_04485	COG4977	sequence-specific DNA binding
NDK36_04490	COG2814	Major facilitator Superfamily
NDK36_04495	COG1082	Xylose isomerase domain protein TIM barrel
NDK36_04505	COG4585	Histidine kinase
NDK36_04510	COG2197	response regulator
NDK36_04515	COG1131	(ABC) transporter
NDK36_04520	COG0842	Transport permease protein
NDK36_04520	COG1511	domain protein
NDK36_04525	COG0842	Transport permease protein
NDK36_04530	COG1695	Transcriptional regulator
NDK36_04535	COG1075	acetyltransferases and hydrolases with the alpha beta hydrolase fold
NDK36_04540	COG3936	Protein involved in polysaccharide intercellular adhesin (PIA) synthesis biofilm formation
NDK36_04545	COG1309	transcriptional regulator
NDK36_04550	COG2814	Major facilitator Superfamily
NDK36_04555	COG2318	DinB family
NDK36_04565	COG1846	Transcriptional regulator
NDK36_04570	COG0392	lysyltransferase activity
NDK36_04570	COG2898	Catalyzes the transfer of a lysyl group from L-lysyl- tRNA(Lys) to membrane-bound phosphatidylglycerol (PG), which produces lysylphosphatidylglycerol (LPG), a major component of the bacterial membrane with a positive net charge. LPG synthesis contributes to bacterial virulence as it is involved in the resistance mechanism against cationic antimicrobial peptides (CAMP) produces by the host's immune system (defensins, cathelicidins) and by the competing microorganisms
NDK36_04575	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
NDK36_04580	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
NDK36_04585	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
NDK36_04590	COG0384	phenazine biosynthesis protein PhzF
NDK36_04595	COG0778	Nitroreductase
NDK36_04610	COG1090	epimerase
NDK36_04615	COG2137	regulation of response to DNA damage stimulus
NDK36_04625	COG2814	Major facilitator Superfamily
NDK36_04640	COG3103	Sh3 type 3 domain protein
NDK36_04645	COG5658	integral membrane protein
NDK36_04650	COG0596	Alpha beta hydrolase
NDK36_04655	COG0463	Glycosyl transferase, family 2
NDK36_04660	COG4485	Bacterial membrane protein, YfhO
NDK36_04665	COG1988	membrane-bound metal-dependent
NDK36_04670	COG1194	a g-specific adenine glycosylase
NDK36_04680	COG1028	Short-chain dehydrogenase reductase Sdr
NDK36_04695	COG3557	Belongs to the UPF0374 family
NDK36_04700	COG1132	(ABC) transporter
NDK36_04705	COG4129	membrane
NDK36_04710	COG0001	glutamate-1-semialdehyde 2,1-aminomutase activity
NDK36_04715	COG1225	Alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen
NDK36_04720	COG0735	belongs to the Fur family
NDK36_04830	COG4326	sporulation control protein
NDK36_04840	COG5577	PFAM Coat F domain
NDK36_04845	COG3340	Belongs to the peptidase S51 family
NDK36_04850	COG0422	Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction
NDK36_04865	COG0753	catalase activity
NDK36_04870	COG1116	anion transmembrane transporter activity
NDK36_04875	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
NDK36_04880	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
NDK36_04885	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
NDK36_04895	COG0199	Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
NDK36_04905	COG1476	TRANSCRIPTIONal
NDK36_04915	COG3382	B3 4 domain protein
NDK36_04920	COG1600	Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr)
NDK36_04930	COG0219	Methylates the ribose at the nucleotide 34 wobble position in the two leucyl isoacceptors tRNA(Leu)(CmAA) and tRNA(Leu)(cmnm5UmAA). Catalyzes the methyl transfer from S- adenosyl-L-methionine to the 2'-OH of the wobble nucleotide
NDK36_04935	COG0789	Transcriptional regulator
NDK36_04940	COG1664	Polymer-forming cytoskeletal
NDK36_04945	COG1664	Polymer-forming cytoskeletal
NDK36_04950	COG2766	serine protein kinase
NDK36_04955	COG2718	Belongs to the UPF0229 family
NDK36_04960	COG1846	Transcriptional regulator
NDK36_04965	COG1566	PFAM secretion protein HlyD family protein
NDK36_04970	COG2814	Major facilitator Superfamily
NDK36_04975	COG0655	NAD(P)H dehydrogenase (quinone) activity
NDK36_04995	COG1725	Transcriptional regulator
NDK36_05000	COG1131	(ABC) transporter
NDK36_05005	COG1131	(ABC) transporter
NDK36_05010	COG1277	ABC-type transport system involved in multi-copper enzyme maturation permease component
NDK36_05015	COG1278	Cold shock
NDK36_05020	COG1464	Belongs to the NlpA lipoprotein family
NDK36_05025	COG3706	GGDEF domain
NDK36_05030	COG1823	symporter activity
NDK36_05035	COG5444	nuclease activity
NDK36_05060	COG0582	viral genome integration into host DNA
NDK36_05125	COG5644	endopeptidase inhibitor activity
NDK36_05130	COG0741	lytic transglycosylase activity
NDK36_05130	COG0791	NLP P60 protein
NDK36_05150	COG0457	Tetratricopeptide repeat
NDK36_05170	COG4085	toxin activity
NDK36_05170	COG1525	nuclease
NDK36_05170	COG0737	Belongs to the 5'-nucleotidase family
NDK36_05175	COG3764	Sortase (surface protein transpeptidase)
NDK36_05180	COG0564	pseudouridine synthase activity
NDK36_05190	COG0517	IMP dehydrogenase activity
NDK36_05195	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
NDK36_05200	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
NDK36_05200	COG3153	acetyltransferase
NDK36_05205	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
NDK36_05210	COG1954	Regulates expression of the glpD operon. In the presence of glycerol 3-phosphate (G3P) causes antitermination of transcription of glpD at the inverted repeat of the leader region to enhance its transcription. Binds and stabilizes glpD leader mRNA
NDK36_05215	COG0580	Belongs to the MIP aquaporin (TC 1.A.8) family
NDK36_05220	COG0554	Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
NDK36_05225	COG0578	Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family
NDK36_05230	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
NDK36_05235	COG2203	Gaf domain
NDK36_05235	COG4585	Histidine kinase
NDK36_05240	COG2197	response regulator
NDK36_05245	COG0431	NADPH-dependent FMN reductase
NDK36_05260	COG1388	LysM domain
NDK36_05260	COG0791	NLP P60 protein
NDK36_05265	COG1959	2 iron, 2 sulfur cluster binding
NDK36_05270	COG0668	transmembrane transport
NDK36_05275	COG2719	SpoVR family
NDK36_05280	COG1785	Belongs to the alkaline phosphatase family
NDK36_05285	COG1388	LysM domain
NDK36_05285	COG0791	NLP P60 protein
NDK36_05290	COG0583	DNA-binding transcription factor activity
NDK36_05295	COG0372	Belongs to the citrate synthase family
NDK36_05300	COG1028	Short-chain dehydrogenase reductase Sdr
NDK36_05305	COG0531	amino acid
NDK36_05310	COG0733	neurotransmitter:sodium symporter activity
NDK36_05315	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
NDK36_05320	COG0456	acetyltransferase
NDK36_05335	COG1595	DNA-templated transcription, initiation
NDK36_05340	COG0667	Aldo Keto reductase
NDK36_05345	COG0204	Acyl-transferase
NDK36_05350	COG1253	flavin adenine dinucleotide binding
NDK36_05355	COG0789	Transcriptional regulator
NDK36_05365	COG1253	flavin adenine dinucleotide binding
NDK36_05370	COG0239	Important for reducing fluoride concentration in the cell, thus reducing its toxicity
NDK36_05375	COG0239	Important for reducing fluoride concentration in the cell, thus reducing its toxicity
NDK36_05380	COG0584	glycerophosphoryl diester phosphodiesterase
NDK36_05390	COG0668	transmembrane transport
NDK36_05395	COG0846	NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form
NDK36_05400	COG0726	polysaccharide deacetylase
NDK36_05405	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
NDK36_05410	COG1757	Na H antiporter
NDK36_05415	COG0589	response to stress
NDK36_05425	COG1132	(ABC) transporter
NDK36_05430	COG1132	(ABC) transporter
NDK36_05435	COG0702	epimerase
NDK36_05460	COG0189	ligase activity
NDK36_05465	COG0189	ligase activity
NDK36_05470	COG4399	Belongs to the UPF0754 family
NDK36_05475	COG3679	Belongs to the UPF0342 family
NDK36_05485	COG0561	phosphatase activity
NDK36_05490	COG0635	Involved in the biosynthesis of porphyrin-containing compound
NDK36_05495	COG0475	glutathione-regulated potassium exporter activity
NDK36_05500	COG0490	domain, Protein
NDK36_05510	COG1024	Enoyl-CoA hydratase
NDK36_05520	COG4152	abc transporter atp-binding protein
NDK36_05525	COG1668	transmembrane transport
NDK36_05530	COG0420	3'-5' exonuclease activity
NDK36_05535	COG4717	serine-type aminopeptidase activity
NDK36_05540	COG3481	metal-dependent phosphohydrolase, HD sub domain
NDK36_05550	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
NDK36_05580	COG1846	Transcriptional regulator
NDK36_05585	COG4980	gas vesicle protein
NDK36_05600	COG1932	Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine
NDK36_05605	COG0537	adenosine 5'-monophosphoramidase activity
NDK36_05610	COG1131	(ABC) transporter
NDK36_05615	COG4473	ABC transporter
NDK36_05625	COG1473	amidohydrolase
NDK36_05630	COG3069	C4-dicarboxylate transmembrane transporter activity
NDK36_05640	COG2329	Antibiotic biosynthesis monooxygenase
NDK36_05645	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
NDK36_05650	COG0407	Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III
NDK36_05655	COG0276	Catalyzes the ferrous insertion into protoporphyrin IX
NDK36_05660	COG1232	Catalyzes the 6-electron oxidation of protoporphyrinogen-IX to form protoporphyrin-IX
NDK36_05665	COG1309	transcriptional regulator
NDK36_05670	COG1511	domain protein
NDK36_05675	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
NDK36_05680	COG4377	Putative membrane peptidase family (DUF2324)
NDK36_05690	COG1363	Peptidase, m42
NDK36_05695	COG4405	Protein conserved in bacteria
NDK36_05700	COG1301	dicarboxylic acid transport
NDK36_05710	COG1234	tRNA 3'-trailer cleavage
NDK36_05715	COG0095	Lipoate-protein ligase
NDK36_05720	COG0702	epimerase
NDK36_05725	COG0318	PFAM AMP-dependent synthetase and ligase
NDK36_05735	COG0501	Belongs to the peptidase M48B family
NDK36_05745	COG0456	acetyltransferase
NDK36_05750	COG0604	alcohol dehydrogenase
NDK36_05755	COG4594	ABC-type Fe3 -citrate transport system, periplasmic component
NDK36_05760	COG0406	alpha-ribazole phosphatase activity
NDK36_05765	COG0183	Belongs to the thiolase family
NDK36_05770	COG0318	PFAM AMP-dependent synthetase and ligase
NDK36_05775	COG1268	BioY protein
NDK36_05780	COG0840	transmembrane signaling receptor activity
NDK36_05790	COG1028	Short-chain dehydrogenase reductase Sdr
NDK36_05800	COG4903	ComK protein
NDK36_05805	COG1028	Short-chain dehydrogenase reductase Sdr
NDK36_05815	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
NDK36_05830	COG0398	Pfam SNARE associated Golgi protein
NDK36_05835	COG0681	Belongs to the peptidase S26 family
NDK36_05840	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
NDK36_05845	COG1846	Transcriptional regulator
NDK36_05855	COG0738	Major facilitator superfamily
NDK36_05860	COG0673	inositol 2-dehydrogenase activity
NDK36_05865	COG0561	phosphatase activity
NDK36_05870	COG0399	UDP-4-amino-4-deoxy-L-arabinose aminotransferase
NDK36_05875	COG1609	Transcriptional regulator
NDK36_05880	COG3180	Ammonia monooxygenase
NDK36_05885	COG0477	Major facilitator Superfamily
NDK36_05885	COG2814	Major facilitator Superfamily
NDK36_05890	COG4533	DNA binding
NDK36_05910	COG1633	Catalyzes the formation of the isocyclic ring in chlorophyll biosynthesis. Mediates the cyclase reaction, which results in the formation of divinylprotochlorophyllide (Pchlide) characteristic of all chlorophylls from magnesium-protoporphyrin IX 13-monomethyl ester (MgPMME)
NDK36_05915	COG3857	The heterodimer acts as both an ATP-dependent DNA helicase and an ATP-dependent, dual-direction single-stranded exonuclease. Recognizes the chi site generating a DNA molecule suitable for the initiation of homologous recombination
NDK36_05920	COG1074	ATP-dependent DNA helicase activity
NDK36_05925	COG0420	3'-5' exonuclease activity
NDK36_05930	COG0419	ATPase involved in DNA repair
NDK36_05935	COG1403	HNH endonuclease
NDK36_05975	COG5337	Spore coat protein CotH
NDK36_05980	COG0179	Fumarylacetoacetate (FAA) hydrolase
NDK36_05990	COG1404	Belongs to the peptidase S8 family
NDK36_06000	COG0367	asparagine synthase
NDK36_06010	COG0534	Mate efflux family protein
NDK36_06015	COG2207	Transcriptional regulator
NDK36_06015	COG1917	Cupin 2, conserved barrel domain protein
NDK36_06020	COG1609	Transcriptional regulator
NDK36_06025	COG0673	inositol 2-dehydrogenase activity
NDK36_06030	COG2318	DinB family
NDK36_06035	COG1279	arginine transmembrane transporter activity
NDK36_06040	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
NDK36_06045	COG1357	PFAM Pentapeptide repeats (8 copies)
NDK36_06050	COG2267	carboxylic ester hydrolase activity
NDK36_06060	COG2153	protein acetylation
NDK36_06065	COG0685	methylenetetrahydrofolate reductase (NAD(P)H) activity
NDK36_06065	COG0646	methionine synthase
NDK36_06070	COG1666	GTP binding
NDK36_06085	COG1307	EDD domain protein, DegV family
NDK36_06090	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
NDK36_06110	COG0561	phosphatase activity
NDK36_06115	COG1073	alpha beta
NDK36_06120	COG2151	metal-sulfur cluster biosynthetic enzyme
NDK36_06130	COG0277	FAD linked oxidase domain protein
NDK36_06140	COG0002	Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde
NDK36_06145	COG1364	Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis the synthesis of N- acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate
NDK36_06155	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
NDK36_06160	COG0505	Belongs to the CarA family
NDK36_06165	COG0458	carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity
NDK36_06170	COG0078	Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
NDK36_06190	COG2267	carboxylic ester hydrolase activity
NDK36_06200	COG1744	ABC transporter substrate-binding protein PnrA-like
NDK36_06215	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
NDK36_06220	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
NDK36_06225	COG5504	Zn-dependent protease
NDK36_06230	COG0444	Belongs to the ABC transporter superfamily
NDK36_06235	COG4608	Belongs to the ABC transporter superfamily
NDK36_06245	COG0601	transmembrane transport
NDK36_06250	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
NDK36_06260	COG0180	Tryptophanyl-tRNA synthetase
NDK36_06265	COG4166	transmembrane transport
NDK36_06270	COG0601	transmembrane transport
NDK36_06275	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
NDK36_06280	COG0444	Belongs to the ABC transporter superfamily
NDK36_06285	COG4608	Belongs to the ABC transporter superfamily
NDK36_06290	COG2814	Major facilitator Superfamily
NDK36_06295	COG0456	acetyltransferase
NDK36_06300	COG1393	Belongs to the ArsC family
NDK36_06305	COG0861	Integral membrane protein TerC family
NDK36_06315	COG4862	establishment of competence for transformation
NDK36_06325	COG4469	Competence protein
NDK36_06330	COG1164	Oligoendopeptidase f
NDK36_06340	COG2761	dithiol-disulfide isomerase involved in polyketide biosynthesis
NDK36_06345	COG2346	COG2346, Truncated hemoglobins
NDK36_06350	COG0741	lytic transglycosylase activity
NDK36_06355	COG4116	CYTH
NDK36_06365	COG2357	RelA SpoT domain protein
NDK36_06370	COG0061	Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
NDK36_06375	COG0564	pseudouridine synthase activity
NDK36_06380	COG0639	Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP
NDK36_06385	COG0569	domain protein
NDK36_06385	COG0475	glutathione-regulated potassium exporter activity
NDK36_06390	COG0819	Catalyzes an amino-pyrimidine hydrolysis reaction at the C5' of the pyrimidine moiety of thiamine compounds, a reaction that is part of a thiamine salvage pathway
NDK36_06395	COG0352	thiamine-phosphate diphosphorylase activity
NDK36_06400	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
NDK36_06405	COG2104	thiamine diphosphate biosynthetic process
NDK36_06410	COG2022	thiamine diphosphate biosynthetic process
NDK36_06415	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
NDK36_06420	COG0351	phosphomethylpyrimidine kinase
NDK36_06425	COG0623	enoyl-[acyl-carrier-protein] reductase (NADH) activity
NDK36_06480	COG0210	DNA helicase
NDK36_06490	COG2153	protein acetylation
NDK36_06495	COG1514	Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'- phosphomonoester
NDK36_06500	COG2382	esterase
NDK36_06505	COG0626	cystathionine gamma-synthase activity
NDK36_06510	COG0626	cystathionine gamma-synthase activity
NDK36_06515	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
NDK36_06520	COG5505	Protein of unknown function (DUF819)
NDK36_06560	COG1396	sequence-specific DNA binding
NDK36_06645	COG0457	Tetratricopeptide repeat
NDK36_06650	COG5444	nuclease activity
NDK36_06660	COG3328	transposase activity
NDK36_06720	COG1359	(4S)-4-hydroxy-5-phosphonooxypentane-2,3-dione isomerase activity
NDK36_06730	COG3711	transcriptional antiterminator
NDK36_06730	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
NDK36_06735	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
NDK36_06735	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
NDK36_06735	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
NDK36_06740	COG1482	cell wall glycoprotein biosynthetic process
NDK36_06755	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
NDK36_06765	COG2606	Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
NDK36_06780	COG0109	protoheme IX farnesyltransferase activity
NDK36_06790	COG0726	polysaccharide deacetylase
NDK36_06805	COG5504	Zn-dependent protease
NDK36_06810	COG2205	protein histidine kinase activity
NDK36_06825	COG2427	Protein of unknown function (DUF1641)
NDK36_06835	COG1051	belongs to the nudix hydrolase family
NDK36_06845	COG2124	cytochrome p450
NDK36_06850	COG1819	glycosyl
NDK36_06860	COG1587	Uroporphyrinogen-III synthase
NDK36_06865	COG0390	transport system, permease component
NDK36_06870	COG1117	ATPase-coupled phosphate ion transmembrane transporter activity
NDK36_06875	COG0697	spore germination
NDK36_06890	COG1252	NADH dehydrogenase
NDK36_06895	COG1904	glucuronate isomerase
NDK36_06900	COG2211	Major facilitator Superfamily
NDK36_06905	COG2055	Belongs to the LDH2 MDH2 oxidoreductase family
NDK36_06910	COG1063	alcohol dehydrogenase
NDK36_06915	COG1312	Catalyzes the dehydration of D-mannonate
NDK36_06920	COG1028	Short-chain dehydrogenase reductase Sdr
NDK36_06925	COG2271	Major facilitator Superfamily
NDK36_06930	COG1609	Transcriptional regulator
NDK36_06935	COG0246	Mannitol dehydrogenase
NDK36_06940	COG2721	sulfolactate sulfo-lyase activity
NDK36_06945	COG0730	response to heat
NDK36_06950	COG2318	DinB family
NDK36_06970	COG0457	Tetratricopeptide repeat
NDK36_06985	COG1388	LysM domain
NDK36_06985	COG3409	Peptidoglycan-binding domain 1 protein
NDK36_06985	COG5632	N-Acetylmuramoyl-L-alanine amidase
NDK36_06995	COG4195	phage-related replication protein
NDK36_07000	COG3546	catalase activity
NDK36_07005	COG2856	Zn peptidase
NDK36_07010	COG1396	sequence-specific DNA binding
NDK36_07020	COG1522	sequence-specific DNA binding
NDK36_07025	COG1484	DNA-dependent DNA replication
NDK36_07045	COG1595	DNA-templated transcription, initiation
NDK36_07050	COG5484	DNA packaging
NDK36_07050	COG3728	DNA packaging
NDK36_07055	COG1783	phage Terminase large subunit
NDK36_07060	COG5518	Phage portal protein
NDK36_07065	COG0338	D12 class N6 adenine-specific DNA methyltransferase
NDK36_07070	COG4653	Phage capsid family
NDK36_07120	COG3953	SLT domain
NDK36_07120	COG5412	phage tail tape measure protein
NDK36_07120	COG3953	SLT domain
NDK36_07120	COG3953	SLT domain
NDK36_07120	COG5412	phage tail tape measure protein
NDK36_07120	COG5412	phage tail tape measure protein
NDK36_07125	COG1652	LysM domain
NDK36_07130	COG4193	domain, Protein
NDK36_07140	COG3628	GPW Gp25 family protein
NDK36_07145	COG3299	homolog of phage Mu protein gp47
NDK36_07150	COG3778	Protein conserved in bacteria
NDK36_07190	COG3409	Peptidoglycan-binding domain 1 protein
NDK36_07190	COG5632	N-Acetylmuramoyl-L-alanine amidase
NDK36_07210	COG0306	phosphate transporter
NDK36_07215	COG1392	Phosphate transport regulator
NDK36_07220	COG0531	amino acid
NDK36_07225	COG0346	lactoylglutathione lyase activity
NDK36_07235	COG1807	4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family
NDK36_07240	COG0463	Glycosyl transferase, family 2
NDK36_07245	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
NDK36_07250	COG0345	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
NDK36_07255	COG2362	D-Aminopeptidase
NDK36_07260	COG0601	transmembrane transport
NDK36_07265	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
NDK36_07270	COG0444	Belongs to the ABC transporter superfamily
NDK36_07275	COG4166	transmembrane transport
NDK36_07280	COG1619	proteins homologs of microcin C7 resistance protein MccF
NDK36_07285	COG4948	Mandelate Racemase Muconate Lactonizing
NDK36_07290	COG0791	NLP P60 protein
NDK36_07295	COG4608	Belongs to the ABC transporter superfamily
NDK36_07300	COG2706	6-phosphogluconolactonase activity
NDK36_07310	COG1607	acyl-coa hydrolase
NDK36_07315	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
NDK36_07315	COG1017	nitric oxide dioxygenase activity
NDK36_07325	COG2323	membrane
NDK36_07330	COG2318	DinB family
NDK36_07335	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
NDK36_07340	COG2076	Multidrug Resistance protein
NDK36_07345	COG2076	Multidrug Resistance protein
NDK36_07350	COG0788	formyltetrahydrofolate deformylase activity
NDK36_07355	COG0263	Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate
NDK36_07360	COG0014	Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5- carboxylate
NDK36_07365	COG1764	response to oxidative stress
NDK36_07370	COG1846	Transcriptional regulator
NDK36_07375	COG1764	response to oxidative stress
NDK36_07385	COG0590	tRNA wobble adenosine to inosine editing
NDK36_07390	COG0620	Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation
NDK36_07395	COG1404	Belongs to the peptidase S8 family
NDK36_07400	COG1366	Belongs to the anti-sigma-factor antagonist family
NDK36_07405	COG0619	Transmembrane (T) component of an energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
NDK36_07410	COG1122	ATPase activity
NDK36_07415	COG4721	ABC-type cobalt transport system, permease component
NDK36_07425	COG0745	RESPONSE REGULATOR receiver
NDK36_07430	COG3850	Histidine kinase
NDK36_07430	COG5002	protein histidine kinase activity
NDK36_07435	COG3212	peptidase
NDK36_07440	COG3212	peptidase
NDK36_07450	COG2239	Acts as a magnesium transporter
NDK36_07455	COG0789	Transcriptional regulator
NDK36_07470	COG1846	Transcriptional regulator
NDK36_07475	COG0707	Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
NDK36_07480	COG0726	polysaccharide deacetylase
NDK36_07485	COG1408	metallophosphoesterase
NDK36_07495	COG0463	Glycosyl transferase, family 2
NDK36_07500	COG3285	dna ligase
NDK36_07500	COG1793	dna ligase
NDK36_07505	COG1273	With LigD forms a non-homologous end joining (NHEJ) DNA repair enzyme, which repairs dsDNA breaks with reduced fidelity. Binds linear dsDNA with 5'- and 3'- overhangs but not closed circular dsDNA nor ssDNA. Recruits and stimulates the ligase activity of LigD
NDK36_07510	COG5001	Diguanylate cyclase
NDK36_07510	COG3300	MHYT domain
NDK36_07515	COG0586	Pfam SNARE associated Golgi protein
NDK36_07520	COG0861	Integral membrane protein TerC family
NDK36_07525	COG1191	sigma factor activity
NDK36_07545	COG0501	Belongs to the peptidase M48B family
NDK36_07550	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
NDK36_07570	COG3594	Acyltransferase
NDK36_07575	COG5002	protein histidine kinase activity
NDK36_07580	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
NDK36_07590	COG0182	Catalyzes the interconversion of methylthioribose-1- phosphate (MTR-1-P) into methylthioribulose-1-phosphate (MTRu-1- P)
NDK36_07595	COG4857	Catalyzes the phosphorylation of methylthioribose into methylthioribose-1-phosphate
NDK36_07600	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
NDK36_07605	COG0436	Aminotransferase
NDK36_07610	COG1850	ribulose-bisphosphate carboxylase activity
NDK36_07615	COG4359	Dephosphorylates 2-hydroxy-3-keto-5-methylthiopentenyl- 1-phosphate (HK-MTPenyl-1-P) yielding 1,2-dihydroxy-3-keto-5- methylthiopentene (DHK-MTPene)
NDK36_07620	COG0235	Class ii aldolase
NDK36_07625	COG1791	Catalyzes 2 different reactions between oxygene and the acireductone 1,2-dihydroxy-3-keto-5-methylthiopentene (DHK-MTPene) depending upon the metal bound in the active site. Fe-containing acireductone dioxygenase (Fe-ARD) produces formate and 2-keto-4- methylthiobutyrate (KMTB), the alpha-ketoacid precursor of methionine in the methionine recycle pathway. Ni-containing acireductone dioxygenase (Ni-ARD) produces methylthiopropionate, carbon monoxide and formate, and does not lie on the methionine recycle pathway
NDK36_07630	COG3339	Conserved Protein
NDK36_07645	COG3852	Histidine kinase
NDK36_07650	COG1846	Transcriptional regulator
NDK36_07655	COG1360	Flagellar Motor Protein
NDK36_07660	COG1291	archaeal or bacterial-type flagellum-dependent cell motility
NDK36_07665	COG0542	response to heat
NDK36_07670	COG3949	Membrane
NDK36_07675	COG0603	Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0))
NDK36_07680	COG0720	synthase
NDK36_07685	COG0602	queuosine metabolic process
NDK36_07690	COG0780	Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1)
NDK36_07700	COG4873	Protein conserved in bacteria
NDK36_07710	COG3773	Cell wall hydrolase
NDK36_07715	COG2244	polysaccharide biosynthetic process
NDK36_07720	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
NDK36_07725	COG2217	Heavy metal translocating P-type atpase
NDK36_07735	COG0006	proline dipeptidase activity
NDK36_07740	COG1609	Transcriptional regulator
NDK36_07745	COG3711	transcriptional antiterminator
NDK36_07750	COG2190	(PTS) system
NDK36_07750	COG1263	PTS System
NDK36_07750	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
NDK36_07755	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
NDK36_07760	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
NDK36_07770	COG1533	DNA photolyase activity
NDK36_07775	COG0456	acetyltransferase
NDK36_07780	COG0840	transmembrane signaling receptor activity
NDK36_07785	COG2084	Dehydrogenase
NDK36_07795	COG3328	transposase activity
NDK36_07805	COG0768	penicillin binding
NDK36_07810	COG4191	Histidine kinase
NDK36_07815	COG0436	Aminotransferase
NDK36_07825	COG0784	Response regulator, receiver
NDK36_07825	COG0835	chemotaxis
NDK36_07835	COG2814	Major facilitator Superfamily
NDK36_07840	COG1376	ErfK ybiS ycfS ynhG family protein
NDK36_07845	COG1408	metallophosphoesterase
NDK36_07850	COG1028	Short-chain dehydrogenase reductase Sdr
NDK36_07855	COG2200	EAL domain
NDK36_07860	COG4703	Protein of unknown function (DUF1797)
NDK36_07865	COG1978	Selenoprotein B, glycine betaine sarcosine D-proline reductase family
NDK36_07875	COG0517	IMP dehydrogenase activity
NDK36_07880	COG0583	DNA-binding transcription factor activity
NDK36_07885	COG0716	FMN binding
NDK36_07895	COG0716	FMN binding
NDK36_07900	COG2171	N-acyltransferase activity
NDK36_07905	COG1473	amidohydrolase
NDK36_07915	COG0668	transmembrane transport
NDK36_07920	COG0450	alkyl hydroperoxide reductase
NDK36_07925	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
NDK36_07945	COG0746	molybdenum cofactor guanylyltransferase activity
NDK36_07950	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
NDK36_07955	COG0303	'Molybdopterin
NDK36_07960	COG1763	Mo-molybdopterin cofactor biosynthetic process
NDK36_07965	COG0314	molybdopterin synthase activity
NDK36_07970	COG1977	Involved in sulfur transfer in the conversion of molybdopterin precursor Z to molybdopterin
NDK36_07980	COG1132	(ABC) transporter
NDK36_07990	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
NDK36_07995	COG1136	(ABC) transporter
NDK36_08000	COG0577	efflux transmembrane transporter activity
NDK36_08005	COG1349	DNA-binding transcription factor activity
NDK36_08010	COG1105	Belongs to the carbohydrate kinase PfkB family
NDK36_08015	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
NDK36_08015	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
NDK36_08015	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
NDK36_08020	COG0681	Belongs to the peptidase S26 family
NDK36_08030	COG0488	(ABC) transporter
NDK36_08035	COG1893	Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
NDK36_08040	COG2309	aminopeptidase activity
NDK36_08050	COG1077	Cell shape determining protein MreB Mrl
NDK36_08055	COG2002	toxin-antitoxin pair type II binding
NDK36_08060	COG3852	Histidine kinase
NDK36_08065	COG2105	PFAM AIG2 family protein
NDK36_08065	COG3703	Catalyzes the cleavage of glutathione into 5-oxo-L- proline and a Cys-Gly dipeptide. Acts specifically on glutathione, but not on other gamma-glutamyl peptides
NDK36_08070	COG0569	domain protein
NDK36_08075	COG1001	Belongs to the metallo-dependent hydrolases superfamily. Adenine deaminase family
NDK36_08080	COG0595	An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
NDK36_08085	COG5503	Protein of unknown function (DUF1447)
NDK36_08090	COG0561	phosphatase activity
NDK36_08095	COG0242	peptide deformylase activity
NDK36_08110	COG1071	oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor
NDK36_08115	COG0022	dehydrogenase e1 component
NDK36_08120	COG0508	dehydrogenase complex catalyzes the overall conversion of
NDK36_08125	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
NDK36_08130	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
NDK36_08140	COG1982	Orn Lys Arg decarboxylase major
NDK36_08145	COG4476	Belongs to the UPF0223 family
NDK36_08150	COG4493	Belongs to the UPF0637 family
NDK36_08160	COG0483	inositol monophosphate 1-phosphatase activity
NDK36_08175	COG3315	Exhibits S-adenosyl-L-methionine-dependent methyltransferase activity
NDK36_08215	COG1217	gtp-binding protein TYPA
NDK36_08225	COG4896	Protein conserved in bacteria
NDK36_08235	COG1875	ATPase related to phosphate starvation-inducible protein PhoH
NDK36_08240	COG2041	Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. The catalytic subunit MsrP is non-stereospecific, being able to reduce both (R-) and (S-) diastereoisomers of methionine sulfoxide
NDK36_08245	COG2066	Belongs to the glutaminase family
NDK36_08250	COG4838	Belongs to the UPF0358 family
NDK36_08255	COG0772	Belongs to the SEDS family
NDK36_08260	COG1038	Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second
NDK36_08265	COG1612	heme a metabolic process
NDK36_08270	COG0109	protoheme IX farnesyltransferase activity
NDK36_08275	COG1622	oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor
NDK36_08275	COG2010	Cytochrome c
NDK36_08280	COG0843	Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B
NDK36_08285	COG1845	cytochrome c oxidase, subunit III
NDK36_08290	COG3125	oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor
NDK36_08295	COG3336	cytochrome c oxidase
NDK36_08305	COG2905	signal-transduction protein containing cAMP-binding and CBS domains
NDK36_08310	COG2340	Cysteine-rich secretory protein family
NDK36_08325	COG3679	Belongs to the UPF0342 family
NDK36_08330	COG4471	UPF0298 protein
NDK36_08335	COG0742	ribosomal rna small subunit methyltransferase
NDK36_08340	COG0669	Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate
NDK36_08345	COG3314	Sporulation integral membrane protein YlbJ
NDK36_08350	COG1752	Esterase of the alpha-beta hydrolase superfamily
NDK36_08355	COG3480	Lon protease (S16) C-terminal proteolytic domain
NDK36_08360	COG1323	Belongs to the UPF0348 family
NDK36_08370	COG1399	metal-binding, possibly nucleic acid-binding protein
NDK36_08385	COG0454	-acetyltransferase
NDK36_08390	COG1893	Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
NDK36_08395	COG4365	Involved in bacillithiol (BSH) biosynthesis. May catalyze the last step of the pathway, the addition of cysteine to glucosamine malate (GlcN-Mal) to generate BSH
NDK36_08400	COG2001	Belongs to the MraZ family
NDK36_08405	COG0275	rRNA processing
NDK36_08410	COG4839	cell division protein FtsL
NDK36_08415	COG0768	penicillin binding
NDK36_08420	COG0768	penicillin binding
NDK36_08425	COG0769	Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
NDK36_08430	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
NDK36_08435	COG0771	Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA)
NDK36_08440	COG0772	Belongs to the SEDS family
NDK36_08445	COG0707	Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
NDK36_08450	COG0812	UDP-N-acetylmuramate dehydrogenase activity
NDK36_08455	COG1589	Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic. May control correct divisome assembly
NDK36_08460	COG3879	Bacterial protein of unknown function (DUF881)
NDK36_08465	COG3879	Bacterial protein of unknown function (DUF881)
NDK36_08470	COG3856	small basic protein
NDK36_08475	COG0849	cell division
NDK36_08480	COG0206	Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
NDK36_08485	COG1404	Belongs to the peptidase S8 family
NDK36_08485	COG4412	M6 family metalloprotease domain protein
NDK36_08495	COG1191	sigma factor activity
NDK36_08500	COG1191	sigma factor activity
NDK36_08505	COG1119	ATPase activity
NDK36_08510	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
NDK36_08515	COG1873	PFAM PRC-barrel domain
NDK36_08520	COG1496	oxidoreductase activity
NDK36_08525	COG0325	Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis
NDK36_08530	COG1799	cell septum assembly
NDK36_08535	COG0762	integral membrane protein
NDK36_08540	COG2302	S4 RNA-binding domain
NDK36_08545	COG3599	regulation of cell shape
NDK36_08550	COG0060	amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)
NDK36_08555	COG1734	Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters
NDK36_08560	COG0597	This protein specifically catalyzes the removal of signal peptides from prolipoproteins
NDK36_08565	COG0564	pseudouridine synthase activity
NDK36_08570	COG2065	Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant
NDK36_08575	COG2233	PERMEase
NDK36_08580	COG0540	Belongs to the ATCase OTCase family
NDK36_08585	COG0044	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides
NDK36_08590	COG0505	Belongs to the CarA family
NDK36_08595	COG0458	carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity
NDK36_08600	COG0543	2 iron, 2 sulfur cluster binding
NDK36_08605	COG0167	dihydroorotate dehydrogenase activity
NDK36_08610	COG0284	orotidine-5'-phosphate decarboxylase activity
NDK36_08615	COG0461	Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)
NDK36_08620	COG0175	sulfate reduction
NDK36_08625	COG0306	phosphate transporter
NDK36_08630	COG2046	Belongs to the sulfate adenylyltransferase family
NDK36_08635	COG0529	Catalyzes the synthesis of activated sulfate
NDK36_08640	COG0007	Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme
NDK36_08645	COG2138	Cobalamin (vitamin B12) biosynthesis CbiX protein
NDK36_08650	COG1648	precorrin-2 dehydrogenase activity
NDK36_08660	COG0474	ATPase, P-type transporting, HAD superfamily, subfamily IC
NDK36_08665	COG1561	YicC-like family, N-terminal region
NDK36_08675	COG0194	GDP metabolic process
NDK36_08680	COG1758	RNA polymerase activity
NDK36_08685	COG0452	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
NDK36_08690	COG1198	Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
NDK36_08695	COG0242	peptide deformylase activity
NDK36_08700	COG0223	Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
NDK36_08705	COG0144	Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
NDK36_08705	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
NDK36_08710	COG0820	rRNA (adenine-C2-)-methyltransferase activity
NDK36_08715	COG0631	protein serine/threonine phosphatase activity
NDK36_08720	COG0515	serine threonine protein kinase
NDK36_08720	COG2815	serine threonine protein kinase
NDK36_08725	COG1162	GTPase activity
NDK36_08730	COG0036	Belongs to the ribulose-phosphate 3-epimerase family
NDK36_08735	COG1564	THIamine pyrophosphokinase
NDK36_08745	COG0227	Belongs to the bacterial ribosomal protein bL28 family
NDK36_08750	COG1302	Protein conserved in bacteria
NDK36_08755	COG1461	Dihydroxyacetone kinase
NDK36_08760	COG1760	l-serine dehydratase
NDK36_08765	COG1760	l-serine dehydratase
NDK36_08770	COG1200	Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
NDK36_08775	COG1349	DNA-binding transcription factor activity
NDK36_08775	COG2050	protein possibly involved in aromatic compounds catabolism
NDK36_08780	COG0416	fatty acid biosynthetic process
NDK36_08785	COG0331	[acyl-carrier-protein] S-malonyltransferase activity
NDK36_08790	COG1028	Short-chain dehydrogenase reductase Sdr
NDK36_08800	COG0571	ribonuclease III activity
NDK36_08805	COG1196	nuclear chromosome segregation
NDK36_08810	COG0552	protein localization to endoplasmic reticulum
NDK36_08820	COG2739	Might take part in the signal recognition particle (SRP) pathway. This is inferred from the conservation of its genetic proximity to ftsY ffh. May be a regulatory protein
NDK36_08825	COG0541	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
NDK36_08830	COG0228	four-way junction DNA binding
NDK36_08835	COG1837	Belongs to the UPF0109 family
NDK36_08845	COG0806	An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes
NDK36_08850	COG0336	Belongs to the RNA methyltransferase TrmD family
NDK36_08855	COG0335	large ribosomal subunit rRNA binding
NDK36_08860	COG1161	Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity
NDK36_08865	COG0164	Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
NDK36_08875	COG2257	FlhB HrpN YscU SpaS Family
NDK36_08880	COG0045	succinate-CoA ligase (ADP-forming) activity
NDK36_08885	COG0074	Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit
NDK36_08890	COG0758	DNA mediated transformation
NDK36_08895	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
NDK36_08900	COG1206	Catalyzes the folate-dependent formation of 5-methyl- uridine at position 54 (M-5-U54) in all tRNAs
NDK36_08905	COG4974	Belongs to the 'phage' integrase family
NDK36_08910	COG5405	Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery
NDK36_08915	COG1220	this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis
NDK36_08920	COG4465	DNA-binding protein that represses the expression of many genes that are induced as cells make the transition from rapid exponential growth to stationary phase. It is a GTP-binding protein that senses the intracellular GTP concentration as an indicator of nutritional limitations. At low GTP concentration it no longer binds GTP and stop to act as a transcriptional repressor
NDK36_08925	COG1815	bacterial-type flagellum-dependent cell motility
NDK36_08930	COG1558	bacterial-type flagellum-dependent cell motility
NDK36_08935	COG1677	Flagellar hook-basal body complex protein FliE
NDK36_08945	COG1536	FliG is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
NDK36_08950	COG1317	bacterial-type flagellum organization
NDK36_08955	COG1157	protein secretion by the type III secretion system
NDK36_08960	COG2882	bacterial-type flagellum organization
NDK36_08965	COG3334	PFAM MgtE intracellular
NDK36_08970	COG3144	bacterial-type flagellum assembly
NDK36_08975	COG1843	Required for flagellar hook formation. May act as a scaffolding protein
NDK36_08980	COG4786	Flagellar basal body rod
NDK36_08985	COG1582	Flagellar protein (FlbD)
NDK36_08990	COG1580	Controls the rotational direction of flagella during chemotaxis
NDK36_08995	COG1868	FliM is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
NDK36_09000	COG1886	FliN is one of three proteins (FliG, FliN, FliM) that form the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
NDK36_09000	COG1776	CheC inhibitor of MCP methylation
NDK36_09005	COG2201	protein-glutamate methylesterase activity
NDK36_09010	COG3190	flagellar
NDK36_09015	COG1338	Plays a role in the flagellum-specific transport system
NDK36_09020	COG1987	bacterial-type flagellum assembly
NDK36_09030	COG1377	Required for formation of the rod structure in the basal body of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin
NDK36_09035	COG1298	Required for formation of the rod structure of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin
NDK36_09040	COG1419	protein localization to endoplasmic reticulum
NDK36_09045	COG0455	bacterial-type flagellum organization
NDK36_09050	COG2201	protein-glutamate methylesterase activity
NDK36_09055	COG0643	Histidine kinase
NDK36_09055	COG2198	Histidine kinase
NDK36_09060	COG0835	chemotaxis
NDK36_09070	COG1871	Probably deamidates glutamine residues to glutamate on methyl-accepting chemotaxis receptors (MCPs), playing an important role in chemotaxis
NDK36_09075	COG1191	sigma factor activity
NDK36_09085	COG0052	Belongs to the universal ribosomal protein uS2 family
NDK36_09090	COG0264	Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome
NDK36_09095	COG0528	UMP kinase activity
NDK36_09100	COG0233	cytoplasmic translational termination
NDK36_09105	COG0020	Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
NDK36_09110	COG4589	Belongs to the CDS family
NDK36_09115	COG0743	1-deoxy-D-xylulose-5-phosphate reductoisomerase activity
NDK36_09120	COG0750	zinc metalloprotease
NDK36_09125	COG0442	prolyl-tRNA aminoacylation
NDK36_09130	COG2176	DNA-directed DNA polymerase activity
NDK36_09135	COG0779	Required for maturation of 30S ribosomal subunits
NDK36_09140	COG0195	Participates in both transcription termination and antitermination
NDK36_09145	COG2740	Nucleic-acid-binding protein implicated in transcription termination
NDK36_09150	COG1358	cellular component organization or biogenesis
NDK36_09155	COG0532	One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex
NDK36_09160	COG1550	Protein conserved in bacteria
NDK36_09165	COG0858	One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA
NDK36_09170	COG0130	Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs
NDK36_09175	COG0196	riboflavin kinase activity
NDK36_09180	COG0184	Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome
NDK36_09185	COG1185	polyribonucleotide nucleotidyltransferase activity
NDK36_09190	COG0726	polysaccharide deacetylase
NDK36_09195	COG0612	Peptidase, M16
NDK36_09200	COG1873	PFAM PRC-barrel domain
NDK36_09205	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
NDK36_09210	COG0452	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
NDK36_09215	COG0136	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
NDK36_09220	COG0527	aspartate kinase activity
NDK36_09225	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
NDK36_09230	COG0595	An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
NDK36_09235	COG0740	serine-type endopeptidase activity
NDK36_09245	COG1674	ftsk spoiiie
NDK36_09245	COG4980	gas vesicle protein
NDK36_09250	COG2188	Transcriptional regulator
NDK36_09255	COG2814	Major facilitator Superfamily
NDK36_09260	COG0612	Peptidase, M16
NDK36_09265	COG0612	Peptidase, M16
NDK36_09270	COG0300	oxidoreductase activity
NDK36_09285	COG1426	Protein conserved in bacteria
NDK36_09290	COG0558	Belongs to the CDP-alcohol phosphatidyltransferase class-I family
NDK36_09295	COG1546	Belongs to the CinA family
NDK36_09295	COG1058	Belongs to the CinA family
NDK36_09300	COG0468	Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage
NDK36_09305	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
NDK36_09310	COG1418	mRNA catabolic process
NDK36_09315	COG1692	metallophosphoesterase
NDK36_09320	COG2359	stage V sporulation protein S
NDK36_09325	COG1063	alcohol dehydrogenase
NDK36_09330	COG0156	8-amino-7-oxononanoate synthase activity
NDK36_09335	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
NDK36_09340	COG4550	Control of competence regulator ComK, YlbF/YmcA
NDK36_09350	COG0249	that it carries out the mismatch recognition step. This protein has a weak ATPase activity
NDK36_09355	COG0323	This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex
NDK36_09460	COG3226	Transcriptional regulator
NDK36_09470	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
NDK36_09475	COG1404	Belongs to the peptidase S8 family
NDK36_09485	COG4195	phage-related replication protein
NDK36_09490	COG1764	response to oxidative stress
NDK36_09495	COG2076	Multidrug Resistance protein
NDK36_09500	COG2076	Multidrug Resistance protein
NDK36_09515	COG0324	Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A)
NDK36_09520	COG1923	regulation of RNA biosynthetic process
NDK36_09535	COG1780	Probably involved in ribonucleotide reductase function
NDK36_09540	COG0209	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
NDK36_09545	COG0208	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
NDK36_09550	COG4112	unkown
NDK36_09555	COG0860	N-Acetylmuramoyl-L-alanine amidase
NDK36_09560	COG0464	growth
NDK36_09565	COG2262	GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
NDK36_09570	COG4100	CystaTHIonine beta-lyase family protein involved in aluminum resistance
NDK36_09575	COG0789	Transcriptional regulator
NDK36_09580	COG0174	glutamine synthetase
NDK36_09585	COG4974	Belongs to the 'phage' integrase family
NDK36_09605	COG3645	SOS response
NDK36_09605	COG3646	Phage regulatory protein
NDK36_09750	COG3953	SLT domain
NDK36_09750	COG5412	phage tail tape measure protein
NDK36_09795	COG5632	N-Acetylmuramoyl-L-alanine amidase
NDK36_09795	COG3409	Peptidoglycan-binding domain 1 protein
NDK36_09795	COG1388	LysM domain
NDK36_09805	COG5444	nuclease activity
NDK36_09840	COG4282	regulation of fungal-type cell wall biogenesis
NDK36_09875	COG3655	Transcriptional regulator
NDK36_09900	COG0135	phosphoribosylanthranilate isomerase activity
NDK36_09910	COG2211	Major facilitator Superfamily
NDK36_09925	COG3507	Belongs to the glycosyl hydrolase 43 family
NDK36_09930	COG1940	carbohydrate kinase activity
NDK36_09935	COG2115	Belongs to the xylose isomerase family
NDK36_09940	COG1070	Carbohydrate kinase
NDK36_09950	COG3328	transposase activity
NDK36_09955	COG1525	nuclease
NDK36_09960	COG2814	Major facilitator Superfamily
NDK36_09965	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
NDK36_09980	COG0756	dUTP diphosphatase activity
NDK36_10020	COG1826	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
NDK36_10040	COG3832	glyoxalase III activity
NDK36_10080	COG4195	phage-related replication protein
NDK36_10090	COG0346	lactoylglutathione lyase activity
NDK36_10100	COG1974	Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
NDK36_10105	COG1388	LysM domain
NDK36_10110	COG1961	COG1961 Site-specific recombinases, DNA invertase Pin homologs
NDK36_10115	COG4224	UPF0291 protein
NDK36_10120	COG0021	Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate
NDK36_10130	COG3763	UPF0154 protein
NDK36_10140	COG0785	Cytochrome C biogenesis protein
NDK36_10145	COG2201	protein-glutamate methylesterase activity
NDK36_10150	COG4846	Membrane protein involved in cytochrome C biogenesis
NDK36_10160	COG0071	Belongs to the small heat shock protein (HSP20) family
NDK36_10175	COG1048	Catalyzes the isomerization of citrate to isocitrate via cis-aconitate
NDK36_10180	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
NDK36_10200	COG0824	Thioesterase
NDK36_10210	COG4841	protein insertion into membrane
NDK36_10215	COG0344	acyl-phosphate glycerol-3-phosphate acyltransferase activity
NDK36_10220	COG1832	CoA-binding protein
NDK36_10225	COG0187	DNA topoisomerase II activity
NDK36_10230	COG0188	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
NDK36_10240	COG1115	amino acid carrier protein
NDK36_10245	COG2730	Belongs to the glycosyl hydrolase 5 (cellulase A) family
NDK36_10255	COG5520	Belongs to the glycosyl hydrolase 30 family
NDK36_10265	COG2246	polysaccharide biosynthetic process
NDK36_10270	COG1210	Utp--glucose-1-phosphate uridylyltransferase
NDK36_10275	COG0586	Pfam SNARE associated Golgi protein
NDK36_10280	COG2404	hydrolase activity, acting on ester bonds
NDK36_10285	COG4799	Acetyl-CoA carboxylase, carboxyltransferase component subunits alpha and beta
NDK36_10290	COG1024	Enoyl-CoA hydratase
NDK36_10295	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
NDK36_10300	COG0511	ligase activity, forming carbon-carbon bonds
NDK36_10305	COG0439	Biotin carboxylase
NDK36_10310	COG0318	PFAM AMP-dependent synthetase and ligase
NDK36_10315	COG1960	acyl-CoA dehydrogenase activity
NDK36_10330	COG1649	PFAM Uncharacterised BCR, COG1649
NDK36_10345	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
NDK36_10350	COG2027	D-alanyl-D-alanine carboxypeptidase
NDK36_10355	COG2017	converts alpha-aldose to the beta-anomer
NDK36_10360	COG0534	Mate efflux family protein
NDK36_10380	COG0582	viral genome integration into host DNA
NDK36_10385	COG0166	Belongs to the GPI family
NDK36_10390	COG0405	Gamma-glutamyltransferase
NDK36_10395	COG0583	DNA-binding transcription factor activity
NDK36_10400	COG0604	alcohol dehydrogenase
NDK36_10405	COG0493	'glutamate synthase
NDK36_10410	COG0067	glutamate synthase
NDK36_10410	COG0069	glutamate synthase activity
NDK36_10410	COG0070	glutamate synthase
NDK36_10415	COG0583	DNA-binding transcription factor activity
NDK36_10445	COG0300	oxidoreductase activity
NDK36_10450	COG4768	protein containing a divergent version of the methyl-accepting chemotaxis-like domain
NDK36_10460	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
NDK36_10475	COG1131	(ABC) transporter
NDK36_10485	COG2814	Major facilitator Superfamily
NDK36_10490	COG3328	transposase activity
NDK36_10520	COG3328	transposase activity
NDK36_10575	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
NDK36_10580	COG2226	methyltransferase
NDK36_10585	COG2211	Major facilitator Superfamily
NDK36_10590	COG3328	transposase activity
NDK36_10620	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
NDK36_10640	COG5444	nuclease activity
NDK36_10645	COG4282	regulation of fungal-type cell wall biogenesis
NDK36_10650	COG1231	oxidoreductase activity
NDK36_10655	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
NDK36_10660	COG2207	Transcriptional regulator
NDK36_10660	COG0662	Cupin 2, conserved barrel domain protein
NDK36_10665	COG0456	acetyltransferase
NDK36_10670	COG1309	transcriptional regulator
NDK36_10675	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
NDK36_10680	COG3708	Transcriptional regulator
NDK36_10685	COG2378	regulation of single-species biofilm formation
NDK36_10695	COG0640	Transcriptional regulator
NDK36_10700	COG0741	lytic transglycosylase activity
NDK36_10705	COG2322	membrane
NDK36_10720	COG1619	proteins homologs of microcin C7 resistance protein MccF
NDK36_10725	COG3239	Fatty acid desaturase
NDK36_10730	COG4585	Histidine kinase
NDK36_10735	COG2197	response regulator
NDK36_10740	COG3584	3D domain protein
NDK36_10740	COG1388	LysM domain
NDK36_10745	COG0514	ATP-dependent DNA helicase (RecQ)
NDK36_10755	COG1182	Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity
NDK36_10760	COG1734	Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters
NDK36_10775	COG0071	Belongs to the small heat shock protein (HSP20) family
NDK36_10800	COG1012	belongs to the aldehyde dehydrogenase family
NDK36_10805	COG1657	PFAM Prenyltransferase squalene oxidase
NDK36_10810	COG0605	Destroys radicals which are normally produced within the cells and which are toxic to biological systems
NDK36_10815	COG0733	neurotransmitter:sodium symporter activity
NDK36_10820	COG0385	Bile acid
NDK36_10825	COG0508	dehydrogenase complex catalyzes the overall conversion of
NDK36_10830	COG0567	Dehydrogenase, E1 component
NDK36_10835	COG4548	von Willebrand factor, type A
NDK36_10840	COG0714	Associated with various cellular activities
NDK36_10845	COG2032	superoxide dismutase activity
NDK36_10850	COG0791	NLP P60 protein
NDK36_10850	COG1388	LysM domain
NDK36_10855	COG1819	glycosyl
NDK36_10860	COG1624	Catalyzes the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria
NDK36_10865	COG0534	Mate efflux family protein
NDK36_10870	COG1366	Belongs to the anti-sigma-factor antagonist family
NDK36_10875	COG2120	A mycothiol (MSH, N-acetylcysteinyl-glucosaminyl- inositol) S-conjugate amidase, it recycles conjugated MSH to the N-acetyl cysteine conjugate (AcCys S-conjugate, a mercapturic acid) and the MSH precursor. Involved in MSH-dependent detoxification of a number of alkylating agents and antibiotics
NDK36_10880	COG2120	A mycothiol (MSH, N-acetylcysteinyl-glucosaminyl- inositol) S-conjugate amidase, it recycles conjugated MSH to the N-acetyl cysteine conjugate (AcCys S-conjugate, a mercapturic acid) and the MSH precursor. Involved in MSH-dependent detoxification of a number of alkylating agents and antibiotics
NDK36_10890	COG2962	Rard protein
NDK36_10905	COG2610	gluconate transmembrane transporter activity
NDK36_10910	COG2610	gluconate transmembrane transporter activity
NDK36_10915	COG1942	4-Oxalocrotonate Tautomerase
NDK36_10920	COG1733	regulation of RNA biosynthetic process
NDK36_10925	COG0778	Nitroreductase
NDK36_10935	COG0400	carboxylic ester hydrolase activity
NDK36_10950	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
NDK36_10955	COG0793	Belongs to the peptidase S41A family
NDK36_10955	COG3409	Peptidoglycan-binding domain 1 protein
NDK36_10960	COG2226	methyltransferase
NDK36_10970	COG1876	peptidase activity
NDK36_10975	COG0813	purine-nucleoside phosphorylase activity
NDK36_10990	COG0671	phosphoesterase, PA-phosphatase related
NDK36_11010	COG4479	Belongs to the UPF0346 family
NDK36_11020	COG1509	lysine 2,3-aminomutase activity
NDK36_11025	COG0456	acetyltransferase
NDK36_11030	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
NDK36_11035	COG2057	Acyl CoA acetate 3-ketoacid CoA transferase beta subunit
NDK36_11040	COG1788	Acyl CoA acetate 3-ketoacid CoA transferase, alpha subunit
NDK36_11045	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
NDK36_11060	COG0456	acetyltransferase
NDK36_11065	COG0463	Glycosyl transferase, family 2
NDK36_11080	COG4641	Protein conserved in bacteria
NDK36_11085	COG4247	3-phytase (myo-inositol-hexaphosphate 3-phosphohydrolase)
NDK36_11090	COG1086	Polysaccharide biosynthesis protein
NDK36_11095	COG0229	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
NDK36_11100	COG0225	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
NDK36_11105	COG1846	Transcriptional regulator
NDK36_11110	COG0534	Mate efflux family protein
NDK36_11120	COG4698	Protein conserved in bacteria
NDK36_11125	COG2755	lipolytic protein G-D-S-L family
NDK36_11130	COG1999	signal sequence binding
NDK36_11140	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
NDK36_11145	COG1221	Transcriptional regulators containing an AAA-type ATPase domain and a DNA-binding domain
NDK36_11150	COG1272	protein, Hemolysin III
NDK36_11155	COG0204	Acyl-transferase
NDK36_11160	COG0262	Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis
NDK36_11165	COG1267	Lipid phosphatase which dephosphorylates phosphatidylglycerophosphate (PGP) to phosphatidylglycerol (PG)
NDK36_11175	COG2136	Putative SAM-dependent methyltransferase
NDK36_11175	COG2521	methyltransferase
NDK36_11185	COG0129	dihydroxy-acid dehydratase activity
NDK36_11190	COG1413	lyase activity
NDK36_11195	COG1418	mRNA catabolic process
NDK36_11200	COG0386	Belongs to the glutathione peroxidase family
NDK36_11205	COG1897	L-methionine biosynthetic process from homoserine via O-succinyl-L-homoserine and cystathionine
NDK36_11210	COG0707	Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
NDK36_11220	COG1278	Cold shock
NDK36_11240	COG0328	RNA-DNA hybrid ribonuclease activity
NDK36_11245	COG1738	Involved in the import of queuosine (Q) precursors, required for Q precursor salvage
NDK36_11250	COG0328	RNA-DNA hybrid ribonuclease activity
NDK36_11260	COG0258	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
NDK36_11275	COG0699	ATPase. Has a role at an early stage in the morphogenesis of the spore coat
NDK36_11285	COG1755	Isoprenylcysteine carboxyl methyltransferase
NDK36_11290	COG3424	synthase
NDK36_11295	COG2233	PERMEase
NDK36_11300	COG0503	Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
NDK36_11305	COG2317	Broad specificity carboxypetidase that releases amino acids sequentially from the C-terminus, including neutral, aromatic, polar and basic residues
NDK36_11315	COG0800	Aldolase
NDK36_11320	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
NDK36_11325	COG1609	Transcriptional regulator
NDK36_11330	COG3717	Catalyzes the isomerization of 5-dehydro-4-deoxy-D- glucuronate to 3-deoxy-D-glycero-2,5-hexodiulosonate
NDK36_11335	COG1028	Short-chain dehydrogenase reductase Sdr
NDK36_11340	COG1199	ATP-dependent helicase activity
NDK36_11355	COG0116	Belongs to the methyltransferase superfamily
NDK36_11370	COG4474	Belongs to the UPF0398 family
NDK36_11385	COG3359	exonuclease
NDK36_11390	COG1205	dead DEAH box helicase
NDK36_11390	COG1111	helicase
NDK36_11395	COG2190	(PTS) system
NDK36_11400	COG0071	Belongs to the small heat shock protein (HSP20) family
NDK36_11435	COG3331	DNA recombination
NDK36_11440	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
NDK36_11440	COG4499	WXG100 protein secretion system (Wss), protein YukC
NDK36_11450	COG0177	DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
NDK36_11455	COG3935	DnaD domain protein
NDK36_11460	COG0017	Asparaginyl-tRNA synthetase
NDK36_11465	COG0436	Aminotransferase
NDK36_11470	COG5353	protein conserved in bacteria
NDK36_11480	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
NDK36_11480	COG1199	ATP-dependent helicase activity
NDK36_11485	COG0853	Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine
NDK36_11490	COG0414	Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate
NDK36_11495	COG0413	3-methyl-2-oxobutanoate hydroxymethyltransferase activity
NDK36_11500	COG0340	biotin-[acetyl-CoA-carboxylase] ligase activity
NDK36_11500	COG1654	Acts both as a biotin-- acetyl-CoA-carboxylase ligase and a biotin-operon repressor. In the presence of ATP, BirA activates biotin to form the BirA-biotinyl-5'-adenylate (BirA-bio- 5'-AMP or holoBirA) complex. HoloBirA can either transfer the biotinyl moiety to the biotin carboxyl carrier protein (BCCP) subunit of acetyl-CoA carboxylase, or bind to the biotin operator site and inhibit transcription of the operon
NDK36_11505	COG0617	tRNA 3'-terminal CCA addition
NDK36_11510	COG0438	transferase activity, transferring glycosyl groups
NDK36_11515	COG2120	A mycothiol (MSH, N-acetylcysteinyl-glucosaminyl- inositol) S-conjugate amidase, it recycles conjugated MSH to the N-acetyl cysteine conjugate (AcCys S-conjugate, a mercapturic acid) and the MSH precursor. Involved in MSH-dependent detoxification of a number of alkylating agents and antibiotics
NDK36_11520	COG1803	Methylglyoxal synthase
NDK36_11525	COG0289	4-hydroxy-tetrahydrodipicolinate reductase
NDK36_11530	COG1694	Mazg nucleotide pyrophosphohydrolase
NDK36_11535	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
NDK36_11545	COG4347	Protein of unknown function (DUF1405)
NDK36_11550	COG1290	Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis
NDK36_11550	COG2010	Cytochrome c
NDK36_11555	COG1290	Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis
NDK36_11560	COG0723	plastoquinol--plastocyanin reductase activity
NDK36_11570	COG5582	Belongs to the UPF0302 family
NDK36_11575	COG0457	Tetratricopeptide repeat
NDK36_11580	COG0128	3-phosphoshikimate 1-carboxyvinyltransferase activity
NDK36_11585	COG0287	Prephenate dehydrogenase
NDK36_11600	COG0133	tryptophan synthase activity
NDK36_11605	COG0135	phosphoribosylanthranilate isomerase activity
NDK36_11615	COG0547	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
NDK36_11620	COG0147	Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
NDK36_11625	COG4401	Chorismate mutase type I
NDK36_11630	COG0337	Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ)
NDK36_11635	COG0082	Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system
NDK36_11640	COG1352	Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP
NDK36_11645	COG0105	UTP biosynthetic process
NDK36_11650	COG0142	geranyltranstransferase activity
NDK36_11655	COG2226	methyltransferase
NDK36_11660	COG0142	geranyltranstransferase activity
NDK36_11670	COG0302	gtp cyclohydrolase
NDK36_11675	COG0776	regulation of translation
NDK36_11680	COG0699	ATPase. Has a role at an early stage in the morphogenesis of the spore coat
NDK36_11695	COG0240	glycerol-3-phosphate dehydrogenase [NAD(P)+] activity
NDK36_11700	COG1160	GTP binding
NDK36_11725	COG1304	FMN binding
NDK36_11730	COG0539	negative regulation of cytoplasmic translation
NDK36_11735	COG0283	belongs to the cytidylate kinase family. Type 1 subfamily
NDK36_11745	COG5581	Acts as a flagellar brake, regulating swimming and swarming in a bis-(3'-5') cyclic diguanylic acid (c-di-GMP)- dependent manner. Binds 1 c-di-GMP dimer per subunit. Increasing levels of c-di-GMP lead to decreased motility
NDK36_11750	COG2959	enzyme of heme biosynthesis
NDK36_11755	COG3773	Cell wall hydrolase
NDK36_11755	COG3409	Peptidoglycan-binding domain 1 protein
NDK36_11760	COG2339	peptidase activity
NDK36_11765	COG0492	ferredoxin-NADP+ reductase activity
NDK36_11770	COG0334	Belongs to the Glu Leu Phe Val dehydrogenases family
NDK36_11775	COG4862	establishment of competence for transformation
NDK36_11780	COG1408	metallophosphoesterase
NDK36_11790	COG1388	LysM domain
NDK36_11795	COG1266	CAAX protease self-immunity
NDK36_11800	COG0514	ATP-dependent DNA helicase (RecQ)
NDK36_11805	COG4955	Helix-turn-helix domain
NDK36_11810	COG1141	Ferredoxin
NDK36_11815	COG3601	Mediates riboflavin uptake, may also transport FMN and roseoflavin. Probably a riboflavin-binding protein that interacts with the energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates. The substrates themselves are bound by transmembrane, not extracytoplasmic soluble proteins
NDK36_11820	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
NDK36_11825	COG0710	3-dehydroquinate dehydratase activity
NDK36_11835	COG1595	DNA-templated transcription, initiation
NDK36_11840	COG5002	protein histidine kinase activity
NDK36_11845	COG0745	RESPONSE REGULATOR receiver
NDK36_11850	COG0755	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
NDK36_11855	COG1333	cytochrome c biogenesis protein
NDK36_11860	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
NDK36_11865	COG1187	pseudouridine synthase activity
NDK36_11870	COG0700	Nucleoside recognition
NDK36_11875	COG2715	membrane protein required for spore maturation
NDK36_11880	COG1686	Belongs to the peptidase S11 family
NDK36_11890	COG1386	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves
NDK36_11895	COG1354	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves
NDK36_11900	COG1547	Domain of unknown function (DUF309)
NDK36_11905	COG0456	acetyltransferase
NDK36_11910	COG0054	6,7-dimethyl-8-ribityllumazine synthase activity
NDK36_11915	COG0108	Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
NDK36_11915	COG0807	Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
NDK36_11920	COG0307	riboflavin synthase, alpha
NDK36_11925	COG0117	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
NDK36_11925	COG1985	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
NDK36_11935	COG0681	Belongs to the peptidase S26 family
NDK36_11945	COG3478	Nucleic-acid-binding protein containing Zn-ribbon domain (DUF2082)
NDK36_11990	COG3328	transposase activity
NDK36_12040	COG0652	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
NDK36_12050	COG4086	secreted protein
NDK36_12055	COG0019	diaminopimelate decarboxylase activity
NDK36_12060	COG0697	spore germination
NDK36_12075	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
NDK36_12095	COG1191	sigma factor activity
NDK36_12100	COG2172	sigma factor antagonist activity
NDK36_12105	COG1366	Belongs to the anti-sigma-factor antagonist family
NDK36_12110	COG1686	Belongs to the peptidase S11 family
NDK36_12115	COG0005	The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate
NDK36_12120	COG1015	Phosphotransfer between the C1 and C5 carbon atoms of pentose
NDK36_12125	COG4974	Belongs to the 'phage' integrase family
NDK36_12135	COG0735	belongs to the Fur family
NDK36_12140	COG1300	Membrane
NDK36_12150	COG0281	malic enzyme
NDK36_12155	COG1757	Na H antiporter
NDK36_12160	COG1027	Aspartate ammonia-lyase
NDK36_12165	COG0252	asparaginase activity
NDK36_12170	COG1396	sequence-specific DNA binding
NDK36_12175	COG1379	DNA repair
NDK36_12180	COG0494	nUDIX hydrolase
NDK36_12190	COG0667	Aldo Keto reductase
NDK36_12200	COG1073	alpha beta
NDK36_12210	COG4918	Iron-sulphur cluster biosynthesis
NDK36_12215	COG0456	acetyltransferase
NDK36_12215	COG2320	Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A
NDK36_12220	COG2329	Antibiotic biosynthesis monooxygenase
NDK36_12225	COG0456	acetyltransferase
NDK36_12235	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
NDK36_12245	COG2211	Major facilitator Superfamily
NDK36_12255	COG0346	lactoylglutathione lyase activity
NDK36_12260	COG1072	(Pantothenic acid kinase))
NDK36_12265	COG3048	D-serine ammonia-lyase activity
NDK36_12270	COG0300	oxidoreductase activity
NDK36_12275	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
NDK36_12280	COG0345	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
NDK36_12285	COG4187	Peptidase family M20/M25/M40
NDK36_12290	COG1902	pentaerythritol trinitrate reductase activity
NDK36_12305	COG0596	Alpha beta hydrolase
NDK36_12315	COG1234	tRNA 3'-trailer cleavage
NDK36_12320	COG0364	Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
NDK36_12325	COG0362	Catalyzes the oxidative decarboxylation of 6- phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH
NDK36_12330	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
NDK36_12340	COG0706	membrane insertase activity
NDK36_12345	COG3361	conserved protein (COG2071)
NDK36_12350	COG2195	Cleaves the N-terminal amino acid of tripeptides
NDK36_12360	COG0346	lactoylglutathione lyase activity
NDK36_12370	COG1376	ErfK ybiS ycfS ynhG family protein
NDK36_12375	COG4129	membrane
NDK36_12380	COG1126	abc transporter atp-binding protein
NDK36_12385	COG0765	amino acid transport
NDK36_12390	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
NDK36_12400	COG1597	lipid kinase activity
NDK36_12410	COG0789	Transcriptional regulator
NDK36_12410	COG4978	Transcriptional regulator
NDK36_12415	COG0508	dehydrogenase complex catalyzes the overall conversion of
NDK36_12420	COG0022	dehydrogenase e1 component
NDK36_12425	COG1071	oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor
NDK36_12430	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
NDK36_12435	COG3426	butyrate kinase activity
NDK36_12440	COG0334	Belongs to the Glu Leu Phe Val dehydrogenases family
NDK36_12445	COG0280	phosphate acetyltransferase
NDK36_12450	COG3829	transcription factor binding
NDK36_12450	COG3290	protein histidine kinase activity
NDK36_12460	COG2513	Catalyzes the thermodynamically favored C-C bond cleavage of (2R,3S)-2-methylisocitrate to yield pyruvate and succinate
NDK36_12465	COG2079	MmgE PrpD family protein
NDK36_12470	COG0372	Belongs to the citrate synthase family
NDK36_12475	COG1960	acyl-CoA dehydrogenase activity
NDK36_12480	COG1250	3-hydroxyacyl-CoA dehydrogenase
NDK36_12485	COG0183	Belongs to the thiolase family
NDK36_12490	COG0584	glycerophosphoryl diester phosphodiesterase
NDK36_12495	COG0860	N-Acetylmuramoyl-L-alanine amidase
NDK36_12510	COG1902	pentaerythritol trinitrate reductase activity
NDK36_12515	COG0745	RESPONSE REGULATOR receiver
NDK36_12520	COG0750	zinc metalloprotease
NDK36_12525	COG0497	DNA recombination
NDK36_12530	COG1438	arginine binding
NDK36_12535	COG1189	Ribosomal RNA methyltransferase RrmJ FtsJ
NDK36_12540	COG1154	Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP)
NDK36_12545	COG0142	geranyltranstransferase activity
NDK36_12550	COG1722	exodeoxyribonuclease VII activity
NDK36_12555	COG1570	exodeoxyribonuclease VII activity
NDK36_12560	COG0190	Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate
NDK36_12565	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
NDK36_12570	COG1302	Protein conserved in bacteria
NDK36_12575	COG0439	Biotin carboxylase
NDK36_12580	COG0511	ligase activity, forming carbon-carbon bonds
NDK36_12625	COG3854	ATPases associated with a variety of cellular activities
NDK36_12635	COG0231	Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
NDK36_12640	COG0006	proline dipeptidase activity
NDK36_12645	COG0757	Catalyzes a trans-dehydration via an enolate intermediate
NDK36_12655	COG3872	metal-dependent enzyme
NDK36_12665	COG1752	Esterase of the alpha-beta hydrolase superfamily
NDK36_12670	COG1321	iron dependent repressor
NDK36_12675	COG0095	Lipoate-protein ligase
NDK36_12680	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
NDK36_12685	COG1003	The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor
NDK36_12690	COG0403	The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor
NDK36_12695	COG0404	The glycine cleavage system catalyzes the degradation of glycine
NDK36_12700	COG0553	Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair
NDK36_12715	COG1396	sequence-specific DNA binding
NDK36_12725	COG0681	Belongs to the peptidase S26 family
NDK36_12750	COG4940	Competence protein ComGF
NDK36_12760	COG4970	Tfp pilus assembly protein FimT
NDK36_12765	COG4537	Required for transformation and DNA binding
NDK36_12770	COG1459	type II secretion system
NDK36_12775	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
NDK36_12780	COG0517	IMP dehydrogenase activity
NDK36_12785	COG0598	Magnesium transport protein CorA
NDK36_12790	COG1253	flavin adenine dinucleotide binding
NDK36_12795	COG1366	Belongs to the anti-sigma-factor antagonist family
NDK36_12805	COG1393	Belongs to the ArsC family
NDK36_12815	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
NDK36_12825	COG0011	TIGRFAM Protein of
NDK36_12835	COG2866	Carboxypeptidase
NDK36_12840	COG1368	sulfuric ester hydrolase activity
NDK36_12845	COG1940	carbohydrate kinase activity
NDK36_12850	COG4483	Protein conserved in bacteria
NDK36_12855	COG0457	Tetratricopeptide repeat
NDK36_12855	COG0705	Rhomboid family
NDK36_12865	COG0212	Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
NDK36_12875	COG0438	transferase activity, transferring glycosyl groups
NDK36_12890	COG1559	Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
NDK36_12895	COG1117	ATPase-coupled phosphate ion transmembrane transporter activity
NDK36_12900	COG1117	ATPase-coupled phosphate ion transmembrane transporter activity
NDK36_12905	COG0581	inorganic phosphate transmembrane transporter activity
NDK36_12910	COG0573	inorganic phosphate transmembrane transporter activity
NDK36_12915	COG0226	Part of the ABC transporter complex PstSACB involved in phosphate import
NDK36_12920	COG0768	penicillin binding
NDK36_12925	COG0477	Major facilitator Superfamily
NDK36_12930	COG0605	Destroys radicals which are normally produced within the cells and which are toxic to biological systems
NDK36_12935	COG2839	Protein conserved in bacteria
NDK36_12940	COG5521	maltodextrose utilization protein MalA
NDK36_12945	COG1388	LysM domain
NDK36_12950	COG0821	Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate
NDK36_12955	COG4709	membrane
NDK36_12960	COG5663	Belongs to the 5'(3')-deoxyribonucleotidase family
NDK36_12965	COG0735	belongs to the Fur family
NDK36_12970	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
NDK36_12980	COG0648	Endonuclease IV plays a role in DNA repair. It cleaves phosphodiester bonds at apurinic or apyrimidinic sites (AP sites) to produce new 5'-ends that are base-free deoxyribose 5-phosphate residues. It preferentially attacks modified AP sites created by bleomycin and neocarzinostatin
NDK36_12985	COG0513	Belongs to the DEAD box helicase family
NDK36_12995	COG0761	Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)- butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP MEP pathway for isoprenoid precursor biosynthesis
NDK36_13000	COG0327	Belongs to the GTP cyclohydrolase I type 2 NIF3 family
NDK36_13005	COG2384	SAM-dependent methyltransferase
NDK36_13010	COG2010	Cytochrome c
NDK36_13015	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
NDK36_13020	COG0358	DNA primase activity
NDK36_13025	COG1671	Belongs to the UPF0178 family
NDK36_13030	COG1806	Bifunctional serine threonine kinase and phosphorylase involved in the regulation of the
NDK36_13035	COG0517	IMP dehydrogenase activity
NDK36_13040	COG0751	glycine-tRNA ligase activity
NDK36_13045	COG0752	glycyl-tRNA synthetase alpha subunit
NDK36_13050	COG1381	Involved in DNA repair and RecF pathway recombination
NDK36_13060	COG1159	An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism
NDK36_13065	COG0295	cytidine deaminase activity
NDK36_13070	COG0818	Recycling of diacylglycerol produced during the turnover of membrane phospholipid
NDK36_13075	COG0319	Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA
NDK36_13080	COG1480	7TM receptor with intracellular HD hydrolase
NDK36_13085	COG1702	phosphate starvation-inducible protein PhoH
NDK36_13090	COG0561	phosphatase activity
NDK36_13105	COG4864	UPF0365 protein
NDK36_13110	COG1030	water channel activity
NDK36_13115	COG1610	YqeY-like protein
NDK36_13125	COG1283	sodium-dependent phosphate transmembrane transporter activity
NDK36_13130	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
NDK36_13135	COG1385	rRNA (uridine-N3-)-methyltransferase activity
NDK36_13140	COG2264	protein methyltransferase activity
NDK36_13145	COG0484	heat shock protein binding
NDK36_13150	COG0443	Heat shock 70 kDa protein
NDK36_13155	COG0576	Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ
NDK36_13160	COG1420	regulation of RNA biosynthetic process
NDK36_13165	COG0635	Involved in the biosynthesis of porphyrin-containing compound
NDK36_13170	COG0481	GTPase activity
NDK36_13180	COG0860	N-Acetylmuramoyl-L-alanine amidase
NDK36_13185	COG0680	Initiates the rapid degradation of small, acid-soluble proteins during spore germination
NDK36_13190	COG0268	Binds directly to 16S ribosomal RNA
NDK36_13195	COG1466	dna polymerase III delta subunit
NDK36_13210	COG2333	competence protein COMEC
NDK36_13210	COG0658	competence protein
NDK36_13215	COG2131	deaminase
NDK36_13220	COG1555	photosystem II stabilization
NDK36_13220	COG1596	polysaccharide export
NDK36_13225	COG0345	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
NDK36_13230	COG2226	methyltransferase
NDK36_13235	COG0799	negative regulation of ribosome biogenesis
NDK36_13240	COG1713	HD superfamily hydrolase involved in NAD metabolism
NDK36_13245	COG1057	Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD)
NDK36_13250	COG1534	Rna-binding protein
NDK36_13255	COG0169	Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA)
NDK36_13260	COG1161	Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity
NDK36_13265	COG2179	HAD superfamily (subfamily IIIA) phosphatase, TIGR01668
NDK36_13275	COG2755	lipolytic protein G-D-S-L family
NDK36_13280	COG5632	N-Acetylmuramoyl-L-alanine amidase
NDK36_13280	COG3409	Peptidoglycan-binding domain 1 protein
NDK36_13285	COG0398	Pfam SNARE associated Golgi protein
NDK36_13290	COG1023	phosphogluconate dehydrogenase (decarboxylating) activity
NDK36_13300	COG3209	COG3209 Rhs family protein
NDK36_13320	COG0114	fumarate hydratase activity
NDK36_13325	COG0583	DNA-binding transcription factor activity
NDK36_13340	COG0457	Tetratricopeptide repeat
NDK36_13480	COG4978	Transcriptional regulator
NDK36_13480	COG0789	Transcriptional regulator
NDK36_13485	COG2814	Major facilitator Superfamily
NDK36_13490	COG0456	acetyltransferase
NDK36_13495	COG1253	flavin adenine dinucleotide binding
NDK36_13505	COG0697	spore germination
NDK36_13510	COG0583	DNA-binding transcription factor activity
NDK36_13515	COG2072	flavoprotein involved in K transport
NDK36_13520	COG1230	cation diffusion facilitator family transporter
NDK36_13535	COG1114	Component of the transport system for branched-chain amino acids
NDK36_13540	COG1687	branched-chain amino acid
NDK36_13550	COG1522	sequence-specific DNA binding
NDK36_13555	COG2732	(Barnase) inhibitor
NDK36_13560	COG2124	cytochrome p450
NDK36_13570	COG1335	isochorismatase
NDK36_13590	COG2318	DinB family
NDK36_13600	COG2070	2-Nitropropane dioxygenase
NDK36_13605	COG0796	Provides the (R)-glutamate required for cell wall biosynthesis
NDK36_13625	COG3443	Belongs to the bacterial solute-binding protein 9 family
NDK36_13630	COG1595	DNA-templated transcription, initiation
NDK36_13635	COG0667	Aldo Keto reductase
NDK36_13640	COG3409	Peptidoglycan-binding domain 1 protein
NDK36_13645	COG5566	PFAM Mor transcription activator
NDK36_13650	COG0596	Alpha beta hydrolase
NDK36_13655	COG4991	sh3 domain protein
NDK36_13660	COG4991	sh3 domain protein
NDK36_13670	COG0346	lactoylglutathione lyase activity
NDK36_13680	COG5577	PFAM Coat F domain
NDK36_13685	COG1063	alcohol dehydrogenase
NDK36_13695	COG5577	PFAM Coat F domain
NDK36_13700	COG0789	Transcriptional regulator
NDK36_13710	COG1064	alcohol dehydrogenase
NDK36_13715	COG0693	protein deglycase activity
NDK36_13720	COG1621	beta-fructofuranosidase activity
NDK36_13725	COG3716	PTS system mannose fructose sorbose family IID component
NDK36_13730	COG3715	PTS system
NDK36_13735	COG3444	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
NDK36_13740	COG2893	phosphoenolpyruvate-dependent sugar phosphotransferase system
NDK36_13745	COG3933	PFAM sigma-54 factor interaction domain-containing protein
NDK36_13745	COG1221	Transcriptional regulators containing an AAA-type ATPase domain and a DNA-binding domain
NDK36_13755	COG1113	amino acid transport
NDK36_13760	COG1280	lysine exporter protein (LysE YggA)
NDK36_13765	COG1378	Sugar-specific transcriptional regulator TrmB
NDK36_13770	COG1595	DNA-templated transcription, initiation
NDK36_13795	COG1309	transcriptional regulator
NDK36_13800	COG2226	methyltransferase
NDK36_13815	COG2116	formate transmembrane transporter activity
NDK36_13820	COG5609	conserved protein (DUF2294)
NDK36_13825	COG3383	formate dehydrogenase (NAD+) activity
NDK36_13830	COG2427	Protein of unknown function (DUF1641)
NDK36_13845	COG0626	cystathionine gamma-synthase activity
NDK36_13850	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
NDK36_13855	COG0775	Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
NDK36_13860	COG2226	methyltransferase
NDK36_13875	COG0768	penicillin binding
NDK36_13880	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
NDK36_13885	COG0572	uridine kinase
NDK36_13890	COG0826	peptidase U32
NDK36_13895	COG0826	peptidase U32
NDK36_13900	COG4122	O-methyltransferase activity
NDK36_13905	COG1559	Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
NDK36_13910	COG3906	Belongs to the UPF0473 family
NDK36_13915	COG0816	Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA
NDK36_13920	COG4472	Bacterial protein of unknown function (DUF965)
NDK36_13925	COG0013	Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
NDK36_13930	COG0628	permease
NDK36_13935	COG1126	abc transporter atp-binding protein
NDK36_13940	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
NDK36_13945	COG0765	amino acid transport
NDK36_13950	COG0765	amino acid transport
NDK36_13965	COG3881	PFAM PRC-barrel domain
NDK36_13970	COG0507	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD
NDK36_13975	COG0457	Tetratricopeptide repeat
NDK36_13980	COG0482	sulfurtransferase activity
NDK36_13985	COG1104	cysteine desulfurase activity
NDK36_13990	COG1959	2 iron, 2 sulfur cluster binding
NDK36_13995	COG2256	atpase related to the helicase subunit of the holliday junction resolvase
NDK36_14000	COG1179	involved in molybdopterin and THIamine biosynthesis family 1
NDK36_14010	COG0173	Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp Asn)
NDK36_14015	COG0124	histidyl-tRNA synthetase
NDK36_14025	COG0860	N-Acetylmuramoyl-L-alanine amidase
NDK36_14025	COG3103	Sh3 type 3 domain protein
NDK36_14025	COG4991	sh3 domain protein
NDK36_14030	COG1490	D-aminoacyl-tRNA deacylase activity
NDK36_14035	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
NDK36_14040	COG0503	Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
NDK36_14045	COG0608	single-stranded DNA 5'-3' exodeoxyribonuclease activity
NDK36_14045	COG4199	Single-strand DNA-specific exonuclease, C terminal domain
NDK36_14050	COG5416	Lipopolysaccharide assembly protein A domain
NDK36_14055	COG0490	domain, Protein
NDK36_14060	COG0342	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
NDK36_14060	COG0341	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
NDK36_14070	COG2244	polysaccharide biosynthetic process
NDK36_14075	COG2323	membrane
NDK36_14085	COG1862	Preprotein translocase
NDK36_14090	COG0343	queuine tRNA-ribosyltransferase activity
NDK36_14095	COG0809	Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA)
NDK36_14105	COG2255	four-way junction helicase activity
NDK36_14110	COG0632	four-way junction helicase activity
NDK36_14120	COG2814	Major facilitator Superfamily
NDK36_14125	COG0673	inositol 2-dehydrogenase activity
NDK36_14130	COG2112	serine threonine protein kinase
NDK36_14155	COG1115	amino acid carrier protein
NDK36_14160	COG0217	transcriptional regulatory protein
NDK36_14170	COG1388	LysM domain
NDK36_14175	COG0379	Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate
NDK36_14180	COG0157	Belongs to the NadC ModD family
NDK36_14185	COG0029	Catalyzes the oxidation of L-aspartate to iminoaspartate
NDK36_14190	COG1104	cysteine desulfurase activity
NDK36_14195	COG1827	regulation of RNA biosynthetic process
NDK36_14200	COG0077	Prephenate dehydratase
NDK36_14205	COG4492	Belongs to the UPF0735 family
NDK36_14210	COG0536	An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control
NDK36_14215	COG3290	protein histidine kinase activity
NDK36_14225	COG0211	Belongs to the bacterial ribosomal protein bL27 family
NDK36_14230	COG2868	ribosomal protein
NDK36_14235	COG0261	This protein binds to 23S rRNA in the presence of protein L20
NDK36_14240	COG1994	Peptidase M50
NDK36_14245	COG0739	heme binding
NDK36_14250	COG2894	cell division
NDK36_14255	COG0850	regulation of cytokinetic process
NDK36_14260	COG2891	Involved in formation of the rod shape of the cell. May also contribute to regulation of formation of penicillin-binding proteins
NDK36_14270	COG1077	Cell shape determining protein MreB Mrl
NDK36_14275	COG2003	Belongs to the UPF0758 family
NDK36_14280	COG0424	maF-like protein
NDK36_14290	COG1989	Cleaves type-4 fimbrial leader sequence and methylates the N-terminal (generally Phe) residue
NDK36_14295	COG0285	dihydrofolate synthase activity
NDK36_14300	COG0525	valine-tRNA ligase activity
NDK36_14310	COG2334	A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response
NDK36_14315	COG1388	LysM domain
NDK36_14320	COG0001	glutamate-1-semialdehyde 2,1-aminomutase activity
NDK36_14325	COG0113	porphobilinogen synthase activity
NDK36_14330	COG1587	Uroporphyrinogen-III synthase
NDK36_14335	COG0181	hydroxymethylbilane synthase activity
NDK36_14340	COG0755	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
NDK36_14345	COG0373	Catalyzes the NADPH-dependent reduction of glutamyl- tRNA(Glu) to glutamate 1-semialdehyde (GSA)
NDK36_14355	COG0218	Necessary for normal cell division and for the maintenance of normal septation
NDK36_14360	COG0466	ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner
NDK36_14365	COG1067	ATP-dependent peptidase activity
NDK36_14365	COG0470	DNA polymerase III
NDK36_14370	COG1219	ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP
NDK36_14375	COG0544	peptidyl-prolyl cis-trans isomerase activity
NDK36_14380	COG1477	protein flavinylation
NDK36_14380	COG0457	Tetratricopeptide repeat
NDK36_14385	COG0066	3-isopropylmalate dehydratase activity
NDK36_14390	COG0065	Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate
NDK36_14395	COG0473	3-isopropylmalate dehydrogenase activity
NDK36_14400	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
NDK36_14405	COG0059	Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate
NDK36_14410	COG0440	acetolactate synthase activity
NDK36_14415	COG0028	Belongs to the TPP enzyme family
NDK36_14430	COG3861	electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity
NDK36_14455	COG4096	Type I site-specific restriction-modification system, R (Restriction) subunit and related
NDK36_14485	COG0622	Phosphoesterase
NDK36_14490	COG0127	Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions
NDK36_14495	COG0689	Phosphorolytic exoribonuclease that removes nucleotide residues following the -CCA terminus of tRNA and adds nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates
NDK36_14500	COG5401	PFAM Sporulation and spore germination
NDK36_14505	COG0796	Provides the (R)-glutamate required for cell wall biosynthesis
NDK36_14510	COG1846	Transcriptional regulator
NDK36_14515	COG2197	response regulator
NDK36_14520	COG0824	Thioesterase
NDK36_14525	COG0479	Belongs to the succinate dehydrogenase fumarate reductase iron-sulfur protein family
NDK36_14530	COG1053	succinate dehydrogenase
NDK36_14535	COG2009	succinate dehydrogenase
NDK36_14540	COG1719	4-vinyl reductase, 4VR
NDK36_14545	COG0527	aspartate kinase activity
NDK36_14550	COG0322	excinuclease ABC activity
NDK36_14555	COG3118	belongs to the thioredoxin family
NDK36_14560	COG3534	alpha-L-arabinofuranosidase
NDK36_14565	COG2025	fatty acid beta-oxidation using acyl-CoA dehydrogenase
NDK36_14570	COG2086	electron transfer activity
NDK36_14575	COG1024	Enoyl-CoA hydratase
NDK36_14580	COG1309	transcriptional regulator
NDK36_14585	COG0318	PFAM AMP-dependent synthetase and ligase
NDK36_14590	COG3766	membrane
NDK36_14595	COG1193	negative regulation of DNA recombination
NDK36_14600	COG1387	Histidinol phosphatase and related hydrolases of the PHP family
NDK36_14600	COG1796	DNA polymerase
NDK36_14605	COG1286	toxin biosynthetic process
NDK36_14610	COG3027	Activator of cell division through the inhibition of FtsZ GTPase activity, therefore promoting FtsZ assembly into bundles of protofilaments necessary for the formation of the division Z ring. It is recruited early at mid-cell but it is not essential for cell division
NDK36_14615	COG1039	Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
NDK36_14620	COG0072	phenylalanine-tRNA ligase activity
NDK36_14620	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
NDK36_14625	COG0016	Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily
NDK36_14635	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
NDK36_14645	COG3835	regulator
NDK36_14650	COG0277	FAD linked oxidase domain protein
NDK36_14655	COG0247	lactate metabolic process
NDK36_14660	COG0346	lactoylglutathione lyase activity
NDK36_14670	COG1966	Carbon starvation protein
NDK36_14675	COG3534	alpha-L-arabinofuranosidase
NDK36_14680	COG0395	ABC-type sugar transport system, permease component
NDK36_14685	COG1175	transmembrane transport
NDK36_14690	COG1653	transport
NDK36_14695	COG0371	Dehydrogenase
NDK36_14700	COG0647	UMP catabolic process
NDK36_14705	COG0235	Class ii aldolase
NDK36_14710	COG1069	ribulokinase activity
NDK36_14715	COG2160	L-arabinose isomerase activity
NDK36_14725	COG1363	Peptidase, m42
NDK36_14735	COG3326	Membrane
NDK36_14740	COG0292	Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit
NDK36_14745	COG0291	Belongs to the bacterial ribosomal protein bL35 family
NDK36_14750	COG0290	IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins
NDK36_14760	COG1346	cytolysis
NDK36_14765	COG1380	Effector of murein hydrolase LrgA
NDK36_14770	COG3279	Response regulator of the LytR AlgR family
NDK36_14775	COG3275	phosphorelay sensor kinase activity
NDK36_14780	COG1011	Hydrolase
NDK36_14785	COG0441	Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
NDK36_14795	COG0398	Pfam SNARE associated Golgi protein
NDK36_14800	COG1484	DNA-dependent DNA replication
NDK36_14805	COG3611	Membrane attachment protein
NDK36_14810	COG1327	Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes
NDK36_14815	COG1586	Catalyzes the decarboxylation of S-adenosylmethionine to S-adenosylmethioninamine (dcAdoMet), the propylamine donor required for the synthesis of the polyamines spermine and spermidine from the diamine putrescine
NDK36_14820	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
NDK36_14825	COG1733	regulation of RNA biosynthetic process
NDK36_14830	COG2814	Major facilitator Superfamily
NDK36_14835	COG0656	L-ascorbic acid biosynthetic process
NDK36_14840	COG0237	dephospho-CoA kinase activity
NDK36_14845	COG1971	Probably functions as a manganese efflux pump
NDK36_14850	COG0266	class I DNA-(apurinic or apyrimidinic site) endonuclease activity
NDK36_14855	COG0749	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
NDK36_14855	COG0258	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
NDK36_14860	COG5002	protein histidine kinase activity
NDK36_14865	COG0745	RESPONSE REGULATOR receiver
NDK36_14870	COG0039	L-malate dehydrogenase activity
NDK36_14875	COG0538	isocitrate dehydrogenase activity
NDK36_14880	COG0372	Belongs to the citrate synthase family
NDK36_14885	COG2707	UPF0756 membrane protein
NDK36_14890	COG0628	permease
NDK36_14895	COG3030	protein affecting phage T7 exclusion by the F plasmid
NDK36_14900	COG0469	pyruvate kinase activity
NDK36_14905	COG0205	6-phosphofructokinase activity
NDK36_14910	COG0825	malonyl-CoA metabolic process
NDK36_14915	COG0777	Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA
NDK36_14920	COG0281	malic enzyme
NDK36_14925	COG0587	DNA-directed DNA polymerase activity
NDK36_14945	COG0618	3'(2'),5'-bisphosphate nucleotidase activity
NDK36_14955	COG4109	DRTGG domain
NDK36_14965	COG2220	Zn-dependent hydrolases of the beta-lactamase fold
NDK36_14970	COG1028	Short-chain dehydrogenase reductase Sdr
NDK36_14975	COG0165	Argininosuccinate lyase
NDK36_14980	COG0137	argininosuccinate synthase activity
NDK36_14985	COG0521	Mo-molybdopterin cofactor biosynthetic process
NDK36_14990	COG0282	Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
NDK36_15000	COG0827	DNA restriction-modification system
NDK36_15005	COG2077	Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides
NDK36_15010	COG3874	Sporulation protein YtfJ
NDK36_15020	COG1714	RDD family
NDK36_15025	COG0616	signal peptide processing
NDK36_15030	COG0061	Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
NDK36_15035	COG1574	metal-dependent hydrolase with the TIM-barrel fold
NDK36_15040	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
NDK36_15050	COG0301	tRNA thio-modification
NDK36_15055	COG1104	cysteine desulfurase activity
NDK36_15060	COG1114	Component of the transport system for branched-chain amino acids
NDK36_15065	COG4477	modulates the frequency and position of FtsZ ring formation. Inhibits FtsZ ring formation at polar sites. Interacts either with FtsZ or with one of its binding partners to promote depolymerization
NDK36_15070	COG1387	Histidinol phosphatase and related hydrolases of the PHP family
NDK36_15075	COG1309	transcriptional regulator
NDK36_15080	COG1956	GAF domain-containing protein
NDK36_15085	COG2199	diguanylate cyclase activity
NDK36_15085	COG2203	Gaf domain
NDK36_15090	COG0522	One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit
NDK36_15095	COG0162	Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
NDK36_15100	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
NDK36_15105	COG0454	-acetyltransferase
NDK36_15110	COG0517	IMP dehydrogenase activity
NDK36_15115	COG0123	including yeast histone deacetylase and acetoin utilization protein
NDK36_15120	COG1360	Flagellar Motor Protein
NDK36_15125	COG1291	archaeal or bacterial-type flagellum-dependent cell motility
NDK36_15130	COG1609	Transcriptional regulator
NDK36_15135	COG2876	3-deoxy-7-phosphoheptulonate synthase activity
NDK36_15135	COG1605	Chorismate mutase
NDK36_15140	COG3118	belongs to the thioredoxin family
NDK36_15145	COG4980	gas vesicle protein
NDK36_15150	COG4768	protein containing a divergent version of the methyl-accepting chemotaxis-like domain
NDK36_15155	COG0773	UDP-N-acetylmuramate-L-alanine ligase activity
NDK36_15160	COG1674	ftsk spoiiie
NDK36_15165	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
NDK36_15170	COG4848	Belongs to the UPF0354 family
NDK36_15175	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
NDK36_15190	COG1363	Peptidase, m42
NDK36_15195	COG5584	Small secreted protein
NDK36_15200	COG0281	malic enzyme
NDK36_15205	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
NDK36_15210	COG0220	tRNA (guanine-N7-)-methyltransferase activity
NDK36_15220	COG0510	thiamine kinase activity
NDK36_15225	COG1523	belongs to the glycosyl hydrolase 13 family
NDK36_15230	COG1597	lipid kinase activity
NDK36_15240	COG1514	Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'- phosphomonoester
NDK36_15245	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
NDK36_15250	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
NDK36_15255	COG2252	PERMEase
NDK36_15260	COG4473	ABC transporter
NDK36_15265	COG1131	(ABC) transporter
NDK36_15270	COG1349	DNA-binding transcription factor activity
NDK36_15275	COG1187	pseudouridine synthase activity
NDK36_15280	COG2244	polysaccharide biosynthetic process
NDK36_15285	COG2081	HI0933 family
NDK36_15290	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
NDK36_15310	COG1653	transport
NDK36_15315	COG4225	unsaturated rhamnogalacturonyl hydrolase activity
NDK36_15320	COG4209	transmembrane transport
NDK36_15330	COG1653	transport
NDK36_15335	COG0395	ABC-type sugar transport system, permease component
NDK36_15340	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
NDK36_15345	COG2124	cytochrome p450
NDK36_15365	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
NDK36_15375	COG1073	alpha beta
NDK36_15380	COG1609	Transcriptional regulator
NDK36_15385	COG1653	transport
NDK36_15390	COG1175	transmembrane transport
NDK36_15395	COG0395	ABC-type sugar transport system, permease component
NDK36_15400	COG1486	melibiose metabolic process
NDK36_15405	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
NDK36_15410	COG0495	leucyl-tRNA aminoacylation
NDK36_15420	COG2202	Pas domain
NDK36_15420	COG1366	Belongs to the anti-sigma-factor antagonist family
NDK36_15425	COG2814	Major facilitator Superfamily
NDK36_15430	COG2433	Pfam Transposase IS66
NDK36_15435	COG0577	efflux transmembrane transporter activity
NDK36_15440	COG1136	(ABC) transporter
NDK36_15445	COG2205	protein histidine kinase activity
NDK36_15450	COG0745	RESPONSE REGULATOR receiver
NDK36_15455	COG0577	efflux transmembrane transporter activity
NDK36_15460	COG1136	(ABC) transporter
NDK36_15475	COG1131	(ABC) transporter
NDK36_15480	COG1725	Transcriptional regulator
NDK36_15495	COG1242	4 iron, 4 sulfur cluster binding
NDK36_15500	COG2519	Catalyzes the S-adenosyl-L-methionine-dependent formation of N(1)-methyladenine at position 58 (m1A58) in tRNA
NDK36_15510	COG2267	carboxylic ester hydrolase activity
NDK36_15515	COG0663	COG0663 Carbonic anhydrases acetyltransferases, isoleucine patch superfamily
NDK36_15520	COG1113	amino acid transport
NDK36_15525	COG0367	asparagine synthase
NDK36_15530	COG0192	Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme
NDK36_15535	COG1866	Involved in the gluconeogenesis. Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP) through direct phosphoryl transfer between the nucleoside triphosphate and OAA
NDK36_15545	COG1506	peptidase
NDK36_15550	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
NDK36_15555	COG1116	anion transmembrane transporter activity
NDK36_15560	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
NDK36_15565	COG0494	nUDIX hydrolase
NDK36_15570	COG4824	toxin secretion phage lysis holin
NDK36_15575	COG0783	Belongs to the Dps family
NDK36_15590	COG1854	S-ribosylhomocysteine lyase activity
NDK36_15595	COG0759	Could be involved in insertion of integral membrane proteins into the membrane
NDK36_15600	COG0288	reversible hydration of carbon dioxide
NDK36_15605	COG0254	rRNA binding
NDK36_15610	COG1271	oxidase subunit
NDK36_15615	COG1294	oxidase, subunit
NDK36_15625	COG1108	ABC-type Mn2 Zn2 transport systems permease components
NDK36_15630	COG1321	iron dependent repressor
NDK36_15630	COG1108	ABC-type Mn2 Zn2 transport systems permease components
NDK36_15635	COG1121	(ABC) transporter
NDK36_15640	COG0803	Belongs to the bacterial solute-binding protein 9 family
NDK36_15645	COG4948	Mandelate Racemase Muconate Lactonizing
NDK36_15650	COG0318	PFAM AMP-dependent synthetase and ligase
NDK36_15655	COG0447	Converts o-succinylbenzoyl-CoA (OSB-CoA) to 1,4- dihydroxy-2-naphthoyl-CoA (DHNA-CoA)
NDK36_15660	COG0596	Alpha beta hydrolase
NDK36_15665	COG1165	Catalyzes the thiamine diphosphate-dependent decarboxylation of 2-oxoglutarate and the subsequent addition of the resulting succinic semialdehyde-thiamine pyrophosphate anion to isochorismate to yield 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylate (SEPHCHC)
NDK36_15670	COG1169	isochorismate synthase
NDK36_15675	COG1734	Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters
NDK36_15680	COG1210	Utp--glucose-1-phosphate uridylyltransferase
NDK36_15685	COG1004	Belongs to the UDP-glucose GDP-mannose dehydrogenase family
NDK36_15690	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
NDK36_15695	COG0438	transferase activity, transferring glycosyl groups
NDK36_15705	COG2334	A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response
NDK36_15710	COG0438	transferase activity, transferring glycosyl groups
NDK36_15715	COG2334	A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response
NDK36_15720	COG3476	COG3476 Tryptophan-rich sensory protein (mitochondrial benzodiazepine receptor homolog)
NDK36_15725	COG0058	SHG alpha-glucan phosphorylase activity
NDK36_15730	COG0297	glycogen (starch) synthase activity
NDK36_15735	COG0448	Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans
NDK36_15740	COG0448	Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans
NDK36_15745	COG0296	Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position
NDK36_15870	COG3859	Proton-coupled thiamine transporter YuaJ
NDK36_15875	COG1247	-acetyltransferase
NDK36_15880	COG2268	Band 7 protein
NDK36_15885	COG1585	Membrane protein implicated in regulation of membrane protease activity
NDK36_15890	COG2318	DinB family
NDK36_15900	COG1454	alcohol dehydrogenase
NDK36_15905	COG1012	belongs to the aldehyde dehydrogenase family
NDK36_15910	COG1510	regulation of RNA biosynthetic process
NDK36_15920	COG0569	domain protein
NDK36_15925	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
NDK36_15930	COG4682	membrane
NDK36_15935	COG1705	Flagellar rod assembly protein muramidase FlgJ
NDK36_15940	COG0477	Major facilitator Superfamily
NDK36_15945	COG5553	Cysteine dioxygenase type I
NDK36_15955	COG1968	undecaprenyl-diphosphatase activity
NDK36_15960	COG0628	permease
NDK36_15965	COG0673	inositol 2-dehydrogenase activity
NDK36_15970	COG4806	L-rhamnose isomerase
NDK36_15975	COG3254	rhamnose metabolic process
NDK36_15980	COG1070	Carbohydrate kinase
NDK36_15985	COG1349	DNA-binding transcription factor activity
NDK36_15990	COG1028	Short-chain dehydrogenase reductase Sdr
NDK36_15990	COG3347	Dehydrogenase
NDK36_16000	COG0840	transmembrane signaling receptor activity
NDK36_16010	COG0840	transmembrane signaling receptor activity
NDK36_16025	COG0432	Pfam Uncharacterised protein family UPF0047
NDK36_16035	COG0366	Alpha amylase catalytic
NDK36_16040	COG1253	flavin adenine dinucleotide binding
NDK36_16045	COG2738	Putative neutral zinc metallopeptidase
NDK36_16060	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
NDK36_16075	COG0166	Belongs to the GPI family
NDK36_16080	COG1979	alcohol dehydrogenase
NDK36_16085	COG1979	alcohol dehydrogenase
NDK36_16090	COG2155	Conserved Protein
NDK36_16095	COG1098	S1 RNA binding domain
NDK36_16100	COG0436	Aminotransferase
NDK36_16105	COG1522	sequence-specific DNA binding
NDK36_16110	COG2267	carboxylic ester hydrolase activity
NDK36_16120	COG1168	Bifunctional PLP-dependent enzyme with beta-cystaTHIonase and maltose regulon repressor activities
NDK36_16125	COG2205	protein histidine kinase activity
NDK36_16135	COG5018	Exonuclease
NDK36_16145	COG2814	Major facilitator Superfamily
NDK36_16150	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
NDK36_16155	COG3011	Protein conserved in bacteria
NDK36_16165	COG3290	protein histidine kinase activity
NDK36_16170	COG4565	transcriptional regulatory protein
NDK36_16175	COG1744	ABC transporter substrate-binding protein PnrA-like
NDK36_16180	COG3845	ABC transporter
NDK36_16185	COG4603	Belongs to the binding-protein-dependent transport system permease family
NDK36_16190	COG1079	Belongs to the binding-protein-dependent transport system permease family
NDK36_16195	COG3493	citrate carrier protein
NDK36_16205	COG2111	Na H antiporter
NDK36_16205	COG1009	NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit
NDK36_16210	COG2111	Na H antiporter
NDK36_16215	COG1006	Multisubunit Na H antiporter MnhC subunit
NDK36_16220	COG0651	ATP synthesis coupled electron transport
NDK36_16225	COG1863	multisubunit Na H antiporter MnhE subunit
NDK36_16230	COG2212	antiporter activity
NDK36_16235	COG1320	monovalent cation:proton antiporter activity
NDK36_16240	COG2050	protein possibly involved in aromatic compounds catabolism
NDK36_16245	COG2197	response regulator
NDK36_16250	COG4585	Histidine kinase
NDK36_16260	COG0142	geranyltranstransferase activity
NDK36_16280	COG3434	signal transduction protein containing EAL and modified HD-GYP domains
NDK36_16285	COG1488	Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP
NDK36_16290	COG1335	isochorismatase
NDK36_16295	COG5506	Protein of unknown function (DUF1694)
NDK36_16310	COG0628	permease
NDK36_16325	COG1418	mRNA catabolic process
NDK36_16330	COG1028	Short-chain dehydrogenase reductase Sdr
NDK36_16340	COG1511	domain protein
NDK36_16345	COG0433	COG0433 Predicted ATPase
NDK36_16345	COG1674	ftsk spoiiie
NDK36_16350	COG4499	WXG100 protein secretion system (Wss), protein YukC
NDK36_16355	COG5417	Belongs to the EsaB family
NDK36_16360	COG4842	Belongs to the WXG100 family
NDK36_16365	COG2508	Transcriptional regulator
NDK36_16365	COG4465	DNA-binding protein that represses the expression of many genes that are induced as cells make the transition from rapid exponential growth to stationary phase. It is a GTP-binding protein that senses the intracellular GTP concentration as an indicator of nutritional limitations. At low GTP concentration it no longer binds GTP and stop to act as a transcriptional repressor
NDK36_16370	COG0686	Belongs to the AlaDH PNT family
NDK36_16375	COG5634	Uncharacterized conserved protein (DUF2278)
NDK36_16380	COG3251	PFAM MbtH domain protein
NDK36_16385	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
NDK36_16390	COG1535	isochorismatase
NDK36_16390	COG3433	isochorismatase activity
NDK36_16395	COG1021	2,3-dihydroxybenzoate-AMP ligase
NDK36_16400	COG1169	isochorismate synthase
NDK36_16405	COG1028	Short-chain dehydrogenase reductase Sdr
NDK36_16410	COG2819	hydrolase of the alpha beta superfamily
NDK36_16415	COG2041	Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. The catalytic subunit MsrP is non-stereospecific, being able to reduce both (R-) and (S-) diastereoisomers of methionine sulfoxide
NDK36_16420	COG1268	BioY protein
NDK36_16425	COG2056	Na+-H+ antiporter family
NDK36_16430	COG0260	Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides
NDK36_16435	COG1963	PFAM Acid phosphatase vanadium-dependent haloperoxidase related
NDK36_16440	COG3584	3D domain protein
NDK36_16455	COG1252	NADH dehydrogenase
NDK36_16460	COG0492	ferredoxin-NADP+ reductase activity
NDK36_16470	COG0516	GMP reductase activity
NDK36_16475	COG2808	Putative FMN-binding domain
NDK36_16480	COG0456	acetyltransferase
NDK36_16590	COG0582	viral genome integration into host DNA
NDK36_16600	COG4974	Belongs to the 'phage' integrase family
NDK36_16605	COG0316	Belongs to the HesB IscA family
NDK36_16610	COG0253	Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan
NDK36_16615	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
NDK36_16620	COG4844	belongs to the
NDK36_16625	COG1252	NADH dehydrogenase
NDK36_16630	COG4837	Protein of unknown function (DUF1462)
NDK36_16635	COG0694	Involved in iron-sulfur cluster biogenesis. Binds a 4Fe- 4S cluster, can transfer this cluster to apoproteins, and thereby intervenes in the maturation of Fe S proteins. Could also act as a scaffold chaperone for damaged Fe S proteins
NDK36_16640	COG4946	Tricorn protease homolog
NDK36_16640	COG0823	Involved in the tonB-independent uptake of proteins
NDK36_16640	COG1506	peptidase
NDK36_16645	COG0083	homoserine kinase activity
NDK36_16650	COG0498	Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine
NDK36_16655	COG0460	homoserine dehydrogenase
NDK36_16660	COG2334	A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response
NDK36_16665	COG1267	Lipid phosphatase which dephosphorylates phosphatidylglycerophosphate (PGP) to phosphatidylglycerol (PG)
NDK36_16670	COG0647	UMP catabolic process
NDK36_16675	COG2445	Protein of unknown function DUF86
NDK36_16680	COG4470	Protein conserved in bacteria
NDK36_16690	COG0320	Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives
NDK36_16695	COG0739	heme binding
NDK36_16705	COG3377	Domain of unknown function (DUF1805)
NDK36_16710	COG0737	Belongs to the 5'-nucleotidase family
NDK36_16715	COG0730	response to heat
NDK36_16720	COG1801	Protein of unknown function DUF72
NDK36_16730	COG0044	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides
NDK36_16735	COG2508	Transcriptional regulator
NDK36_16740	COG2233	PERMEase
NDK36_16745	COG2233	PERMEase
NDK36_16750	COG3195	allantoin biosynthetic process
NDK36_16750	COG3648	Uricase
NDK36_16755	COG2351	hydroxyisourate hydrolase activity
NDK36_16765	COG2080	2 iron, 2 sulfur cluster binding
NDK36_16770	COG1529	Aldehyde oxidase and xanthine dehydrogenase
NDK36_16775	COG1319	Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM
NDK36_16780	COG2068	MobA-Related Protein
NDK36_16785	COG1975	Xanthine and CO dehydrogenases maturation factor, XdhC CoxF family
NDK36_16790	COG0075	2-aminoethylphosphonate-pyruvate transaminase activity
NDK36_16795	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
NDK36_16805	COG2356	endonuclease I
NDK36_16810	COG3842	ATPase activity
NDK36_16815	COG2188	Transcriptional regulator
NDK36_16820	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
NDK36_16830	COG1175	transmembrane transport
NDK36_16835	COG1653	transport
NDK36_16840	COG2222	sugar isomerase
NDK36_16845	COG0322	excinuclease ABC activity
NDK36_16850	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
NDK36_16865	COG0346	lactoylglutathione lyase activity
NDK36_16870	COG0640	Transcriptional regulator
NDK36_16875	COG0719	Fe-S assembly protein
NDK36_16880	COG0822	iron-sulfur transferase activity
NDK36_16885	COG0520	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
NDK36_16890	COG0719	Fe-S assembly protein
NDK36_16895	COG0396	ATPase activity
NDK36_16910	COG1464	Belongs to the NlpA lipoprotein family
NDK36_16915	COG2011	ABC-type metal ion transport system permease component
NDK36_16920	COG1135	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
NDK36_16930	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
NDK36_16935	COG1658	Required for correct processing of both the 5' and 3' ends of 5S rRNA precursor. Cleaves both sides of a double-stranded region yielding mature 5S rRNA in one step
NDK36_16945	COG0509	glycine decarboxylation via glycine cleavage system
NDK36_16950	COG1393	Belongs to the ArsC family
NDK36_16955	COG1960	acyl-CoA dehydrogenase activity
NDK36_16960	COG0183	Belongs to the thiolase family
NDK36_16965	COG1024	Enoyl-CoA hydratase
NDK36_16965	COG1250	3-hydroxyacyl-CoA dehydrogenase
NDK36_16985	COG5577	PFAM Coat F domain
NDK36_16990	COG1846	Transcriptional regulator
NDK36_16995	COG0477	Major facilitator Superfamily
NDK36_17000	COG1942	4-Oxalocrotonate Tautomerase
NDK36_17005	COG1028	Short-chain dehydrogenase reductase Sdr
NDK36_17010	COG0583	DNA-binding transcription factor activity
NDK36_17020	COG1120	ATPase activity
NDK36_17040	COG1131	(ABC) transporter
NDK36_17085	COG0783	Belongs to the Dps family
NDK36_17090	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
NDK36_17095	COG0745	RESPONSE REGULATOR receiver
NDK36_17100	COG2205	protein histidine kinase activity
NDK36_17100	COG2770	Histidine kinase
NDK36_17110	COG1309	transcriptional regulator
NDK36_17115	COG0114	fumarate hydratase activity
NDK36_17125	COG0697	spore germination
NDK36_17130	COG0814	amino acid
NDK36_17140	COG2197	response regulator
NDK36_17145	COG4585	Histidine kinase
NDK36_17150	COG4758	membrane
NDK36_17155	COG3595	metallopeptidase activity
NDK36_17160	COG1842	Phage shock protein A
NDK36_17165	COG4758	membrane
NDK36_17170	COG2814	Major facilitator Superfamily
NDK36_17175	COG2096	Adenosyltransferase
NDK36_17180	COG1120	ATPase activity
NDK36_17185	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
NDK36_17190	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
NDK36_17195	COG1028	Short-chain dehydrogenase reductase Sdr
NDK36_17200	COG3386	PFAM SMP-30 Gluconolaconase
NDK36_17205	COG2205	protein histidine kinase activity
NDK36_17210	COG0745	RESPONSE REGULATOR receiver
NDK36_17230	COG2140	Oxalate decarboxylase
NDK36_17240	COG0577	efflux transmembrane transporter activity
NDK36_17245	COG1136	(ABC) transporter
NDK36_17250	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
NDK36_17255	COG1120	ATPase activity
NDK36_17260	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
NDK36_17265	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
NDK36_17270	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
NDK36_17275	COG0531	amino acid
NDK36_17285	COG1988	membrane-bound metal-dependent
NDK36_17290	COG1368	sulfuric ester hydrolase activity
NDK36_17295	COG1910	domain protein
NDK36_17300	COG0725	ABC transporter, periplasmic molybdate-binding protein
NDK36_17305	COG4149	molybdate abc transporter
NDK36_17310	COG0656	L-ascorbic acid biosynthetic process
NDK36_17320	COG0025	NhaP-type Na H and K H
NDK36_17325	COG0155	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
NDK36_17330	COG0369	Component of the sulfite reductase complex that catalyzes the 6-electron reduction of sulfite to sulfide. This is one of several activities required for the biosynthesis of L- cysteine from sulfate. The flavoprotein component catalyzes the electron flow from NADPH - FAD - FMN to the hemoprotein component
NDK36_17335	COG3973	AAA domain
NDK36_17345	COG2860	membrane
NDK36_17350	COG1495	Required for disulfide bond formation in some periplasmic proteins. Acts by oxidizing the DsbA protein
NDK36_17355	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
NDK36_17360	COG2217	Heavy metal translocating P-type atpase
NDK36_17365	COG2217	Heavy metal translocating P-type atpase
NDK36_17370	COG2608	mercury ion transmembrane transporter activity
NDK36_17375	COG1937	Protein conserved in bacteria
NDK36_17380	COG0673	inositol 2-dehydrogenase activity
NDK36_17390	COG1289	transmembrane transporter activity
NDK36_17400	COG2076	Multidrug Resistance protein
NDK36_17405	COG1309	transcriptional regulator
NDK36_17410	COG1028	Short-chain dehydrogenase reductase Sdr
NDK36_17420	COG5444	nuclease activity
NDK36_17435	COG5632	N-Acetylmuramoyl-L-alanine amidase
NDK36_17435	COG3409	Peptidoglycan-binding domain 1 protein
NDK36_17440	COG4824	toxin secretion phage lysis holin
NDK36_17465	COG3942	CHAP domain
NDK36_17465	COG1705	Flagellar rod assembly protein muramidase FlgJ
NDK36_17705	COG0691	Required for rescue of stalled ribosomes mediated by trans-translation. Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes. tmRNA and SmpB together mimic tRNA shape, replacing the anticodon stem-loop with SmpB. tmRNA is encoded by the ssrA gene
NDK36_17710	COG0557	exoribonuclease II activity
NDK36_17715	COG1647	Serine aminopeptidase, S33
NDK36_17720	COG1314	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
NDK36_17725	COG0596	Alpha beta hydrolase
NDK36_17730	COG1476	TRANSCRIPTIONal
NDK36_17735	COG1396	sequence-specific DNA binding
NDK36_17740	COG1396	sequence-specific DNA binding
NDK36_17745	COG1733	regulation of RNA biosynthetic process
NDK36_17750	COG0840	transmembrane signaling receptor activity
NDK36_17755	COG1174	glycine betaine transport
NDK36_17760	COG1732	Glycine betaine
NDK36_17765	COG1174	glycine betaine transport
NDK36_17770	COG0517	IMP dehydrogenase activity
NDK36_17770	COG1125	glycine betaine transport
NDK36_17775	COG1510	regulation of RNA biosynthetic process
NDK36_17780	COG1174	glycine betaine transport
NDK36_17785	COG1732	Glycine betaine
NDK36_17790	COG1174	glycine betaine transport
NDK36_17795	COG0517	IMP dehydrogenase activity
NDK36_17795	COG1125	glycine betaine transport
NDK36_17800	COG1510	regulation of RNA biosynthetic process
NDK36_17805	COG2095	MarC family integral membrane protein
NDK36_17815	COG3064	Membrane
NDK36_17820	COG4640	response to antibiotic
NDK36_17825	COG0456	acetyltransferase
NDK36_17830	COG0148	phosphopyruvate hydratase activity
NDK36_17835	COG0696	Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
NDK36_17840	COG0149	triose-phosphate isomerase activity
NDK36_17845	COG0126	phosphoglycerate kinase activity
NDK36_17850	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
NDK36_17855	COG2390	Transcriptional regulator
NDK36_17860	COG2814	Major facilitator Superfamily
NDK36_17865	COG1609	Transcriptional regulator
NDK36_17870	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
NDK36_17875	COG0583	DNA-binding transcription factor activity
NDK36_17880	COG0697	spore germination
NDK36_17885	COG1113	amino acid transport
NDK36_17895	COG1556	Lactate utilization protein
NDK36_17900	COG1139	Iron-sulfur cluster binding protein
NDK36_17905	COG0247	lactate metabolic process
NDK36_17910	COG2197	response regulator
NDK36_17915	COG4585	Histidine kinase
NDK36_17920	COG0842	Transport permease protein
NDK36_17925	COG1131	(ABC) transporter
NDK36_17945	COG0596	Alpha beta hydrolase
NDK36_17950	COG2208	phosphoserine phosphatase activity
NDK36_17955	COG3867	Arabinogalactan endo-beta-1,4-galactanase
NDK36_17960	COG1874	Beta-galactosidase
NDK36_17965	COG3833	ABC-type maltose transport systems, permease component
NDK36_17970	COG1175	transmembrane transport
NDK36_17975	COG2182	Extracellular solute-binding protein
NDK36_17980	COG1609	Transcriptional regulator
NDK36_17985	COG2186	Transcriptional regulator
NDK36_17990	COG1620	l-lactate permease
NDK36_17995	COG1508	bacterial-type RNA polymerase transcriptional activator activity, sequence-specific DNA binding
NDK36_18005	COG5039	Polysaccharide pyruvyl transferase
NDK36_18010	COG0399	UDP-4-amino-4-deoxy-L-arabinose aminotransferase
NDK36_18015	COG0110	maltose O-acetyltransferase activity
NDK36_18020	COG2148	undecaprenyl-phosphate glucose phosphotransferase activity
NDK36_18025	COG2244	polysaccharide biosynthetic process
NDK36_18030	COG1216	Glycosyl transferase, family 2
NDK36_18035	COG5039	Polysaccharide pyruvyl transferase
NDK36_18040	COG1216	Glycosyl transferase, family 2
NDK36_18050	COG0438	transferase activity, transferring glycosyl groups
NDK36_18055	COG1215	transferase activity, transferring glycosyl groups
NDK36_18060	COG0438	transferase activity, transferring glycosyl groups
NDK36_18065	COG1086	Polysaccharide biosynthesis protein
NDK36_18070	COG0489	protein tyrosine kinase activity
NDK36_18075	COG3944	biosynthesis protein
NDK36_18080	COG1396	sequence-specific DNA binding
NDK36_18085	COG2272	Belongs to the type-B carboxylesterase lipase family
NDK36_18095	COG3479	Phenolic acid decarboxylase
NDK36_18110	COG1794	racemase activity, acting on amino acids and derivatives
NDK36_18120	COG1621	beta-fructofuranosidase activity
NDK36_18125	COG1621	beta-fructofuranosidase activity
NDK36_18130	COG0531	amino acid
NDK36_18135	COG1309	transcriptional regulator
NDK36_18140	COG2076	Multidrug Resistance protein
NDK36_18145	COG2076	Multidrug Resistance protein
NDK36_18165	COG1674	ftsk spoiiie
NDK36_18185	COG5632	N-Acetylmuramoyl-L-alanine amidase
NDK36_18185	COG3409	Peptidoglycan-binding domain 1 protein
NDK36_18185	COG1388	LysM domain
NDK36_18220	COG1705	Flagellar rod assembly protein muramidase FlgJ
NDK36_18300	COG0582	viral genome integration into host DNA
NDK36_18405	COG4974	Belongs to the 'phage' integrase family
NDK36_18415	COG0740	serine-type endopeptidase activity
NDK36_18420	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
NDK36_18425	COG0366	Alpha amylase catalytic
NDK36_18430	COG1554	hydrolase, family 65, central catalytic
NDK36_18435	COG5521	maltodextrose utilization protein MalA
NDK36_18440	COG3833	ABC-type maltose transport systems, permease component
NDK36_18445	COG1175	transmembrane transport
NDK36_18450	COG2182	Extracellular solute-binding protein
NDK36_18460	COG1609	Transcriptional regulator
NDK36_18465	COG1611	Belongs to the LOG family
NDK36_18475	COG0659	secondary active sulfate transmembrane transporter activity
NDK36_18480	COG0288	reversible hydration of carbon dioxide
NDK36_18485	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
NDK36_18490	COG0577	efflux transmembrane transporter activity
NDK36_18495	COG1136	(ABC) transporter
NDK36_18500	COG5002	protein histidine kinase activity
NDK36_18505	COG0745	RESPONSE REGULATOR receiver
NDK36_18515	COG2162	N-hydroxyarylamine O-acetyltransferase activity
NDK36_18520	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
NDK36_18525	COG1481	regulation of sporulation
NDK36_18530	COG0391	Required for morphogenesis under gluconeogenic growth conditions
NDK36_18535	COG1660	Displays ATPase and GTPase activities
NDK36_18540	COG1051	belongs to the nudix hydrolase family
NDK36_18545	COG0492	ferredoxin-NADP+ reductase activity
NDK36_18550	COG0791	NLP P60 protein
NDK36_18550	COG3883	PFAM NLP P60 protein
NDK36_18555	COG0457	Tetratricopeptide repeat
NDK36_18560	COG1132	(ABC) transporter
NDK36_18580	COG0140	phosphoribosyl-ATP diphosphatase activity
NDK36_18580	COG0139	Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP
NDK36_18585	COG0107	imidazoleglycerol-phosphate synthase activity
NDK36_18590	COG0106	1-(5-phosphoribosyl)-5- 5-phosphoribosylamino)methylideneamino imidazole-4-carboxamide isomerase
NDK36_18595	COG0118	IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR
NDK36_18600	COG0131	Imidazoleglycerol-phosphate dehydratase
NDK36_18605	COG0141	Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine
NDK36_18610	COG0040	Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of hisG enzymatic activity
NDK36_18615	COG3705	Required for the first step of histidine biosynthesis. May allow the feedback regulation of ATP phosphoribosyltransferase activity by histidine
NDK36_18620	COG4990	cell redox homeostasis
NDK36_18625	COG5297	Belongs to the glycosyl hydrolase family 6
NDK36_18640	COG0546	phosphoglycolate phosphatase activity
NDK36_18645	COG0370	Transporter of a GTP-driven Fe(2 ) uptake system
NDK36_18650	COG0682	Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins
NDK36_18655	COG1493	Catalyzes the ATP- as well as the pyrophosphate- dependent phosphorylation of a specific serine residue in HPr, a phosphocarrier protein of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS). HprK P also catalyzes the pyrophosphate-producing, inorganic phosphate-dependent dephosphorylation (phosphorolysis) of seryl-phosphorylated HPr (P- Ser-HPr). The two antagonistic activities of HprK P are regulated by several intracellular metabolites, which change their concentration in response to the absence or presence of rapidly metabolisable carbon sources (glucose, fructose, etc.) in the growth medium. Therefore, by controlling the phosphorylation state of HPr, HPrK P is a sensor enzyme that plays a major role in the regulation of carbon metabolism and sugar transport it mediates carbon catabolite repression (CCR), and regulates PTS-catalyzed carbohydrate uptake and inducer exclusion
NDK36_18660	COG1820	Belongs to the metallo-dependent hydrolases superfamily. NagA family
NDK36_18665	COG0363	glucosamine-6-phosphate deaminase activity
NDK36_18670	COG2188	Transcriptional regulator
NDK36_18675	COG1409	Hydrolyzes cAMP to 5'-AMP. Plays an important regulatory role in modulating the intracellular concentration of cAMP, thereby influencing cAMP-dependent processes
NDK36_18690	COG1950	PFAM Membrane protein of
NDK36_18695	COG1983	PspC domain protein
NDK36_18700	COG3595	metallopeptidase activity
NDK36_18715	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
NDK36_18720	COG0178	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate
NDK36_18725	COG0556	nucleotide-excision repair
NDK36_18730	COG4897	Protein conserved in bacteria
NDK36_18735	COG3848	Pyruvate phosphate dikinase
NDK36_18735	COG0574	Belongs to the PEP-utilizing enzyme family
NDK36_18740	COG1309	transcriptional regulator
NDK36_18745	COG2814	Major facilitator Superfamily
NDK36_18750	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
NDK36_18760	COG3409	Peptidoglycan-binding domain 1 protein
NDK36_18760	COG0793	Belongs to the peptidase S41A family
NDK36_18765	COG2177	Part of the ABC transporter FtsEX involved in
NDK36_18770	COG2884	Cell division ATP-binding protein ftsE
NDK36_18775	COG2010	Cytochrome c
NDK36_18780	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
NDK36_18790	COG0653	protein targeting
NDK36_18795	COG1544	Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
NDK36_18810	COG1516	flagellar protein fliS
NDK36_18815	COG1345	Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end
NDK36_18820	COG1334	flagellar protein FlaG
NDK36_18825	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
NDK36_18830	COG1551	Could accelerate the degradation of some genes transcripts potentially through selective RNA binding
NDK36_18835	COG1699	Binds to the C-terminal region of flagellin, which is implicated in polymerization, and participates in the assembly of the flagellum
NDK36_18845	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
NDK36_18850	COG1256	bacterial-type flagellum assembly
NDK36_18850	COG4786	Flagellar basal body rod
NDK36_18855	COG3418	PFAM FlgN family protein
NDK36_18860	COG2747	anti-sigma28 factor FlgM
NDK36_18870	COG1040	competence protein
NDK36_18880	COG4098	Superfamily II DNA RNA helicase required for DNA uptake (late competence protein)
NDK36_18885	COG1307	EDD domain protein, DegV family
NDK36_18890	COG2197	response regulator
NDK36_18895	COG4585	Histidine kinase
NDK36_18900	COG1739	Uncharacterized protein family UPF0029
NDK36_18935	COG1131	(ABC) transporter
NDK36_18945	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
NDK36_18950	COG0438	transferase activity, transferring glycosyl groups
NDK36_18955	COG1215	transferase activity, transferring glycosyl groups
NDK36_18960	COG3206	protein involved in exopolysaccharide biosynthesis
NDK36_18965	COG3307	-O-antigen
NDK36_18970	COG1004	Belongs to the UDP-glucose GDP-mannose dehydrogenase family
NDK36_18975	COG0438	transferase activity, transferring glycosyl groups
NDK36_18975	COG0297	glycogen (starch) synthase activity
NDK36_18980	COG2244	polysaccharide biosynthetic process
NDK36_18995	COG0860	N-Acetylmuramoyl-L-alanine amidase
NDK36_18995	COG2247	cell wall binding repeat
NDK36_19000	COG2247	cell wall binding repeat
NDK36_19000	COG2385	sporulation resulting in formation of a cellular spore
NDK36_19030	COG0381	UDP-N-acetylglucosamine 2-epimerase activity
NDK36_19035	COG1210	Utp--glucose-1-phosphate uridylyltransferase
NDK36_19050	COG1682	transport, permease protein
NDK36_19060	COG1887	Glycosyl glycerophosphate transferases involved in teichoic acid biosynthesis TagF TagB EpsJ RodC
NDK36_19060	COG0463	Glycosyl transferase, family 2
NDK36_19065	COG1887	Glycosyl glycerophosphate transferases involved in teichoic acid biosynthesis TagF TagB EpsJ RodC
NDK36_19070	COG0615	ADP-L-glycero-beta-D-manno-heptose biosynthetic process
NDK36_19075	COG1922	lipopolysaccharide N-acetylmannosaminouronosyltransferase activity
NDK36_19080	COG1887	Glycosyl glycerophosphate transferases involved in teichoic acid biosynthesis TagF TagB EpsJ RodC
NDK36_19085	COG4193	domain, Protein
NDK36_19090	COG1482	cell wall glycoprotein biosynthetic process
NDK36_19095	COG0697	spore germination
NDK36_19100	COG0814	amino acid
NDK36_19115	COG1316	TRANSCRIPTIONal
NDK36_19120	COG0561	phosphatase activity
NDK36_19125	COG0791	NLP P60 protein
NDK36_19135	COG2843	Capsule synthesis protein
NDK36_19145	COG0771	Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA)
NDK36_19150	COG1609	Transcriptional regulator
NDK36_19155	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
NDK36_19160	COG1869	D-ribose catabolic process
NDK36_19165	COG1129	ABC transporter
NDK36_19170	COG1172	Belongs to the binding-protein-dependent transport system permease family
NDK36_19175	COG1879	ABC-type sugar transport system periplasmic component
NDK36_19180	COG3103	Sh3 type 3 domain protein
NDK36_19190	COG2249	NAD(P)H dehydrogenase (quinone) activity
NDK36_19195	COG3527	Alpha-acetolactate decarboxylase
NDK36_19200	COG0028	Belongs to the TPP enzyme family
NDK36_19205	COG0583	DNA-binding transcription factor activity
NDK36_19210	COG1055	Involved in arsenical resistance. Thought to form the channel of an arsenite pump
NDK36_19225	COG5337	Spore coat protein CotH
NDK36_19235	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
NDK36_19245	COG0405	Gamma-glutamyltransferase
NDK36_19250	COG1522	sequence-specific DNA binding
NDK36_19255	COG2059	Chromate
NDK36_19260	COG2059	Chromate
NDK36_19270	COG0655	NAD(P)H dehydrogenase (quinone) activity
NDK36_19275	COG0583	DNA-binding transcription factor activity
NDK36_19335	COG1004	Belongs to the UDP-glucose GDP-mannose dehydrogenase family
NDK36_19340	COG4464	protein tyrosine phosphatase activity
NDK36_19345	COG0489	protein tyrosine kinase activity
NDK36_19350	COG3944	biosynthesis protein
NDK36_19360	COG4715	Zinc finger, swim domain protein
NDK36_19365	COG0553	Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair
NDK36_19370	COG0561	phosphatase activity
NDK36_19375	COG1349	DNA-binding transcription factor activity
NDK36_19380	COG0629	single-stranded DNA binding
NDK36_19400	COG0745	RESPONSE REGULATOR receiver
NDK36_19400	COG2972	Histidine kinase
NDK36_19405	COG1970	mechanosensitive ion channel activity
NDK36_19410	COG0764	3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity
NDK36_19415	COG0457	Tetratricopeptide repeat
NDK36_19420	COG4786	Flagellar basal body rod
NDK36_19425	COG4786	Flagellar basal body rod
NDK36_19430	COG1077	Cell shape determining protein MreB Mrl
NDK36_19435	COG1609	Transcriptional regulator
NDK36_19445	COG1846	Transcriptional regulator
NDK36_19450	COG2814	Major facilitator Superfamily
NDK36_19455	COG3420	alginic acid biosynthetic process
NDK36_19460	COG1953	Uracil, thiamine, allantoin
NDK36_19465	COG0477	Major facilitator Superfamily
NDK36_19470	COG1335	isochorismatase
NDK36_19480	COG0004	ammonium transporteR
NDK36_19485	COG0347	Belongs to the P(II) protein family
NDK36_19490	COG0671	phosphoesterase, PA-phosphatase related
NDK36_19500	COG0739	heme binding
NDK36_19505	COG1247	-acetyltransferase
NDK36_19515	COG2089	acid synthase
NDK36_19525	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
NDK36_19530	COG0789	Transcriptional regulator
NDK36_19540	COG2910	NAD(P)H-binding
NDK36_19545	COG1959	2 iron, 2 sulfur cluster binding
NDK36_19550	COG0804	urea catabolic process
NDK36_19555	COG0832	Belongs to the urease beta subunit family
NDK36_19560	COG0831	urea catabolic process
NDK36_19575	COG3237	CsbD-like
NDK36_19580	COG1994	Peptidase M50
NDK36_19585	COG0457	Tetratricopeptide repeat
NDK36_19590	COG2896	Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate
NDK36_19595	COG1526	Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH
NDK36_19605	COG2304	oxidoreductase activity
NDK36_19615	COG2304	oxidoreductase activity
NDK36_19620	COG2385	sporulation resulting in formation of a cellular spore
NDK36_19625	COG0766	Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
NDK36_19635	COG4836	Membrane
NDK36_19645	COG0355	proton-transporting ATP synthase activity, rotational mechanism
NDK36_19650	COG0055	Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits
NDK36_19655	COG0224	Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex
NDK36_19660	COG0056	Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit
NDK36_19665	COG0712	F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
NDK36_19670	COG0711	Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)
NDK36_19680	COG0356	it plays a direct role in the translocation of protons across the membrane
NDK36_19690	COG0035	Catalyzes the conversion of uracil and 5-phospho-alpha- D-ribose 1-diphosphate (PRPP) to UMP and diphosphate
NDK36_19695	COG0112	Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism
NDK36_19700	COG4475	Protein of unknown function (DUF436)
NDK36_19705	COG0698	ribose 5-phosphate isomerase
NDK36_19710	COG0394	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
NDK36_19715	COG1971	Probably functions as a manganese efflux pump
NDK36_19720	COG0009	L-threonylcarbamoyladenylate synthase
NDK36_19725	COG1246	Belongs to the acetyltransferase family. ArgA subfamily
NDK36_19745	COG2890	protein-(glutamine-N5) methyltransferase activity
NDK36_19750	COG0216	Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA
NDK36_19755	COG0346	lactoylglutathione lyase activity
NDK36_19760	COG0789	Transcriptional regulator
NDK36_19765	COG0679	Auxin Efflux Carrier
NDK36_19770	COG0281	malic enzyme
NDK36_19775	COG1435	thymidine kinase activity
NDK36_19785	COG1158	Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template
NDK36_19795	COG1494	fructose-1,6-bisphosphatase
NDK36_19800	COG0766	Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
NDK36_19810	COG0176	Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
NDK36_19815	COG0191	fructose-bisphosphate aldolase activity
NDK36_19820	COG2204	response regulator
NDK36_19825	COG4821	SIS domain
NDK36_19830	COG0504	CTP synthase activity
NDK36_19835	COG3343	RNA polymerase activity
NDK36_19840	COG1960	acyl-CoA dehydrogenase activity
NDK36_19845	COG0247	lactate metabolic process
NDK36_19845	COG2181	nitrate reductase activity
NDK36_19850	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
NDK36_19855	COG4294	response to UV
NDK36_19865	COG0262	Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis
NDK36_19875	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
NDK36_19885	COG2181	nitrate reductase activity
NDK36_19890	COG2180	nitrate reductase molybdenum cofactor assembly chaperone
NDK36_19895	COG1140	nitrate reductase beta subunit
NDK36_19900	COG5013	Belongs to the prokaryotic molybdopterin-containing oxidoreductase family
NDK36_19905	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
NDK36_19915	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
NDK36_19920	COG2223	nitrite transmembrane transporter activity
NDK36_19925	COG0018	arginyl-trna synthetase
NDK36_19930	COG4506	Protein conserved in bacteria
NDK36_19945	COG0535	radical SAM domain protein
NDK36_19955	COG1131	(ABC) transporter
NDK36_19960	COG0474	ATPase, P-type transporting, HAD superfamily, subfamily IC
NDK36_19965	COG0612	Peptidase, M16
NDK36_19970	COG0612	Peptidase, M16
NDK36_19980	COG3391	amine dehydrogenase activity
NDK36_19985	COG3391	amine dehydrogenase activity
NDK36_19990	COG0457	Tetratricopeptide repeat
NDK36_20005	COG0010	Belongs to the arginase family
NDK36_20010	COG0421	Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine
NDK36_20015	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
NDK36_20030	COG1994	Peptidase M50
NDK36_20035	COG1942	4-Oxalocrotonate Tautomerase
NDK36_20040	COG1846	Transcriptional regulator
NDK36_20045	COG0441	Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
NDK36_20050	COG0477	Major facilitator Superfamily
NDK36_20055	COG1959	2 iron, 2 sulfur cluster binding
NDK36_20060	COG3465	dGTPase activity
NDK36_20065	COG1078	dGTPase activity
NDK36_20070	COG4844	belongs to the
NDK36_20080	COG0697	spore germination
NDK36_20085	COG0095	Lipoate-protein ligase
NDK36_20090	COG0583	DNA-binding transcription factor activity
NDK36_20095	COG0280	phosphate acetyltransferase
NDK36_20100	COG3253	May function as heme-dependent peroxidase
NDK36_20105	COG1028	Short-chain dehydrogenase reductase Sdr
NDK36_20110	COG0436	Aminotransferase
NDK36_20115	COG2814	Major facilitator Superfamily
NDK36_20120	COG0151	Belongs to the GarS family
NDK36_20125	COG1028	Short-chain dehydrogenase reductase Sdr
NDK36_20130	COG1917	Cupin 2, conserved barrel domain protein
NDK36_20135	COG0077	Prephenate dehydratase
NDK36_20140	COG2814	Major facilitator Superfamily
NDK36_20145	COG0833	amino acid
NDK36_20150	COG4187	Peptidase family M20/M25/M40
NDK36_20155	COG1012	belongs to the aldehyde dehydrogenase family
NDK36_20160	COG0334	Belongs to the Glu Leu Phe Val dehydrogenases family
NDK36_20170	COG1898	dTDP-4-dehydrorhamnose 3,5-epimerase activity
NDK36_20175	COG1091	dTDP-4-dehydrorhamnose reductase activity
NDK36_20180	COG1088	dTDP-glucose 4,6-dehydratase activity
NDK36_20185	COG1209	Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis
NDK36_20190	COG3980	spore coat polysaccharide biosynthesis protein
NDK36_20195	COG1861	Spore coat polysaccharide biosynthesis protein F CMP-KDO synthetase
NDK36_20200	COG2089	acid synthase
NDK36_20205	COG0456	acetyltransferase
NDK36_20210	COG0399	UDP-4-amino-4-deoxy-L-arabinose aminotransferase
NDK36_20215	COG1887	Glycosyl glycerophosphate transferases involved in teichoic acid biosynthesis TagF TagB EpsJ RodC
NDK36_20220	COG0463	Glycosyl transferase, family 2
NDK36_20230	COG2363	Small membrane protein
NDK36_20235	COG2233	PERMEase
NDK36_20245	COG1012	belongs to the aldehyde dehydrogenase family
NDK36_20250	COG0692	Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine
NDK36_20255	COG1216	Glycosyl transferase, family 2
NDK36_20260	COG0351	phosphomethylpyrimidine kinase
NDK36_20270	COG1621	beta-fructofuranosidase activity
NDK36_20275	COG1263	PTS System
NDK36_20275	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
NDK36_20280	COG2116	formate transmembrane transporter activity
NDK36_20295	COG1404	Belongs to the peptidase S8 family
NDK36_20300	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
NDK36_20305	COG0778	Nitroreductase
NDK36_20310	COG0772	Belongs to the SEDS family
NDK36_20325	COG3125	oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor
NDK36_20330	COG1845	cytochrome c oxidase, subunit III
NDK36_20335	COG0843	Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B
NDK36_20340	COG1622	oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor
NDK36_20345	COG2261	transglycosylase associated protein
NDK36_20350	COG4468	UDPglucose--hexose-1-phosphate uridylyltransferase
NDK36_20355	COG0153	Catalyzes the transfer of the gamma-phosphate of ATP to D-galactose to form alpha-D-galactose-1-phosphate (Gal-1-P)
NDK36_20360	COG2246	polysaccharide biosynthetic process
NDK36_20365	COG1309	transcriptional regulator
NDK36_20375	COG3162	membrane
NDK36_20380	COG4147	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
NDK36_20385	COG2761	dithiol-disulfide isomerase involved in polyketide biosynthesis
NDK36_20390	COG2837	iron assimilation
NDK36_20395	COG2822	iron ion transport
NDK36_20400	COG0672	)-iron permease
NDK36_20405	COG0352	thiamine-phosphate diphosphorylase activity
NDK36_20410	COG2145	Catalyzes the phosphorylation of the hydroxyl group of 4-methyl-5-beta-hydroxyethylthiazole (THZ)
NDK36_20415	COG0583	DNA-binding transcription factor activity
NDK36_20420	COG1380	Effector of murein hydrolase LrgA
NDK36_20425	COG1346	cytolysis
NDK36_20430	COG2814	Major facilitator Superfamily
NDK36_20435	COG4895	conserved protein (DUF2196)
NDK36_20440	COG1092	Specifically methylates the guanine in position 2445 (m2G2445) and the guanine in position 2069 (m7G2069) of 23S rRNA
NDK36_20445	COG0346	lactoylglutathione lyase activity
NDK36_20465	COG1263	PTS System
NDK36_20465	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
NDK36_20470	COG3711	transcriptional antiterminator
NDK36_20475	COG1442	glycosyl transferase family 8
NDK36_20480	COG5522	Integral membrane protein (intg_mem_TP0381)
NDK36_20485	COG1846	Transcriptional regulator
NDK36_20490	COG0162	Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
NDK36_20495	COG2234	aminopeptidase activity
NDK36_20500	COG2357	RelA SpoT domain protein
NDK36_20510	COG1575	Belongs to the MenA family. Type 1 subfamily
NDK36_20525	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
NDK36_20530	COG1696	Membrane protein involved in D-alanine export
NDK36_20535	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
NDK36_20540	COG3966	Protein involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein)
NDK36_20550	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
NDK36_20555	COG1486	melibiose metabolic process
NDK36_20560	COG1447	Phosphotransferase system cellobiose-specific component IIA
NDK36_20565	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
NDK36_20570	COG1440	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
NDK36_20575	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
NDK36_20575	COG3711	transcriptional antiterminator
NDK36_20585	COG2094	Belongs to the DNA glycosylase MPG family
NDK36_20590	COG0753	catalase activity
NDK36_20595	COG2814	Major facilitator Superfamily
NDK36_20600	COG1277	ABC-type transport system involved in multi-copper enzyme maturation permease component
NDK36_20605	COG1131	(ABC) transporter
NDK36_20625	COG1595	DNA-templated transcription, initiation
NDK36_20630	COG1457	Belongs to the purine-cytosine permease (2.A.39) family
NDK36_20635	COG0063	ADP-dependent NAD(P)H-hydrate dehydratase activity
NDK36_20640	COG4987	ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease ATP-binding protein CydC
NDK36_20645	COG4988	ABC transporter
NDK36_20650	COG1294	oxidase, subunit
NDK36_20655	COG1271	oxidase subunit
NDK36_20660	COG3493	citrate carrier protein
NDK36_20665	COG0501	Belongs to the peptidase M48B family
NDK36_20675	COG0726	polysaccharide deacetylase
NDK36_20680	COG3842	ATPase activity
NDK36_20685	COG2508	Transcriptional regulator
NDK36_20690	COG1012	belongs to the aldehyde dehydrogenase family
NDK36_20695	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
NDK36_20700	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
NDK36_20710	COG4585	Histidine kinase
NDK36_20715	COG2197	response regulator
NDK36_20720	COG2195	Cleaves the N-terminal amino acid of tripeptides
NDK36_20730	COG4894	glucomannan catabolic process
NDK36_20735	COG0620	Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation
NDK36_20740	COG0620	Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation
NDK36_20745	COG1028	Short-chain dehydrogenase reductase Sdr
NDK36_20750	COG2057	Acyl CoA acetate 3-ketoacid CoA transferase beta subunit
NDK36_20755	COG1788	Acyl CoA acetate 3-ketoacid CoA transferase, alpha subunit
NDK36_20760	COG2610	gluconate transmembrane transporter activity
NDK36_20765	COG0500	methyltransferase
NDK36_20770	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
NDK36_20785	COG0693	protein deglycase activity
NDK36_20785	COG0753	catalase activity
NDK36_20790	COG2851	Citrate transporter
NDK36_20795	COG2273	Hydrolase Family 16
NDK36_20800	COG3711	transcriptional antiterminator
NDK36_20810	COG2270	Major facilitator Superfamily
NDK36_20815	COG0513	Belongs to the DEAD box helicase family
NDK36_20820	COG2755	lipolytic protein G-D-S-L family
NDK36_20820	COG3401	FG-GAP repeat protein
NDK36_20940	COG0697	spore germination
NDK36_20955	COG0589	response to stress
NDK36_20965	COG1263	PTS System
NDK36_20965	COG2190	(PTS) system
NDK36_20965	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
NDK36_20985	COG5444	nuclease activity
NDK36_21005	COG0494	nUDIX hydrolase
NDK36_21010	COG1112	Superfamily I DNA and RNA helicases and helicase subunits
NDK36_21015	COG3507	Belongs to the glycosyl hydrolase 43 family
NDK36_21030	COG0213	The enzymes which catalyze the reversible phosphorolysis of pyrimidine nucleosides are involved in the degradation of these compounds and in their utilization as carbon and energy sources, or in the rescue of pyrimidine bases for nucleotide synthesis
NDK36_21035	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
NDK36_21040	COG0274	Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy- D-ribose 5-phosphate
NDK36_21045	COG2390	Transcriptional regulator
NDK36_21055	COG3192	ethanolamine utilization protein
NDK36_21060	COG2079	MmgE PrpD family protein
NDK36_21065	COG1473	amidohydrolase
NDK36_21070	COG1126	abc transporter atp-binding protein
NDK36_21075	COG0765	amino acid transport
NDK36_21080	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
NDK36_21085	COG0456	acetyltransferase
NDK36_21090	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
NDK36_21095	COG3049	Linear amide C-N hydrolases, choloylglycine hydrolase family
NDK36_21100	COG0561	phosphatase activity
NDK36_21130	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
NDK36_21135	COG5294	Protein conserved in bacteria
NDK36_21150	COG2205	protein histidine kinase activity
NDK36_21155	COG0745	RESPONSE REGULATOR receiver
NDK36_21160	COG0191	fructose-bisphosphate aldolase activity
NDK36_21165	COG1082	Xylose isomerase domain protein TIM barrel
NDK36_21170	COG1082	Xylose isomerase domain protein TIM barrel
NDK36_21175	COG0673	inositol 2-dehydrogenase activity
NDK36_21180	COG2814	Major facilitator Superfamily
NDK36_21185	COG1082	Xylose isomerase domain protein TIM barrel
NDK36_21190	COG3962	Belongs to the TPP enzyme family
NDK36_21195	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
NDK36_21215	COG1349	DNA-binding transcription factor activity
NDK36_21220	COG0667	Aldo Keto reductase
NDK36_21250	COG0326	Molecular chaperone. Has ATPase activity
NDK36_21305	COG1917	Cupin 2, conserved barrel domain protein
NDK36_21310	COG1309	transcriptional regulator
NDK36_21315	COG1028	Short-chain dehydrogenase reductase Sdr
NDK36_21320	COG1846	Transcriptional regulator
NDK36_21325	COG1380	Effector of murein hydrolase LrgA
NDK36_21330	COG1346	cytolysis
NDK36_21335	COG5039	Polysaccharide pyruvyl transferase
NDK36_21340	COG1929	Belongs to the glycerate kinase type-1 family
NDK36_21345	COG1802	Transcriptional regulator
NDK36_21350	COG1070	Carbohydrate kinase
NDK36_21355	COG2610	gluconate transmembrane transporter activity
NDK36_21360	COG0362	Catalyzes the oxidative decarboxylation of 6- phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH
NDK36_21365	COG0450	alkyl hydroperoxide reductase
NDK36_21370	COG3634	alkyl hydroperoxide reductase activity
NDK36_21375	COG2723	6-phospho-beta-galactosidase activity
NDK36_21380	COG2190	(PTS) system
NDK36_21390	COG2188	Transcriptional regulator
NDK36_21400	COG1131	(ABC) transporter
NDK36_21405	COG3855	fructose 1,6-bisphosphate 1-phosphatase activity
NDK36_21415	COG0071	Belongs to the small heat shock protein (HSP20) family
NDK36_21445	COG0210	DNA helicase
NDK36_21475	COG2963	transposase activity
NDK36_21510	COG1576	Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA
NDK36_21525	COG1063	alcohol dehydrogenase
NDK36_21545	COG3863	Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family
NDK36_21550	COG0456	acetyltransferase
NDK36_21555	COG0457	Tetratricopeptide repeat
NDK36_21565	COG0010	Belongs to the arginase family
NDK36_21570	COG0833	amino acid
NDK36_21575	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
NDK36_21595	COG5658	integral membrane protein
NDK36_21600	COG0640	Transcriptional regulator
NDK36_21605	COG3829	transcription factor binding
NDK36_21620	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
NDK36_21625	COG1235	May be involved in the transport of PQQ or its precursor to the periplasm
NDK36_21630	COG4853	Protein conserved in bacteria
NDK36_21635	COG4863	YycH protein
NDK36_21640	COG5002	protein histidine kinase activity
NDK36_21645	COG0745	RESPONSE REGULATOR receiver
NDK36_21675	COG0346	lactoylglutathione lyase activity
NDK36_21680	COG0305	Participates in initiation and elongation during chromosome replication
NDK36_21695	COG3093	addiction module antidote protein HigA
NDK36_21700	COG2807	transmembrane transport
NDK36_21705	COG1807	4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family
NDK36_21710	COG0359	binds to the 23S rRNA
NDK36_21715	COG3887	signaling protein consisting of a modified GGDEF domain and a DHH domain
NDK36_21720	COG4241	membrane
NDK36_21735	COG1733	regulation of RNA biosynthetic process
NDK36_21740	COG1227	inorganic diphosphatase activity
NDK36_21755	COG2271	Major facilitator Superfamily
NDK36_21760	COG4978	Transcriptional regulator
NDK36_21760	COG0789	Transcriptional regulator
NDK36_21770	COG4319	ketosteroid isomerase
NDK36_21775	COG1357	PFAM Pentapeptide repeats (8 copies)
NDK36_21790	COG1846	Transcriptional regulator
NDK36_21795	COG2153	protein acetylation
NDK36_21800	COG2364	Membrane
NDK36_21805	COG0456	acetyltransferase
NDK36_21810	COG2315	Protein conserved in bacteria
NDK36_21815	COG0262	Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis
NDK36_21825	COG3449	Inhibits the supercoiling activity of DNA gyrase. Acts by inhibiting DNA gyrase at an early step, prior to (or at the step of) binding of DNA by the gyrase. It protects cells against toxins that target DNA gyrase, by inhibiting activity of these toxins and reducing the formation of lethal double-strand breaks in the cell
NDK36_21830	COG1331	Highly conserved protein containing a thioredoxin domain
NDK36_21835	COG1266	CAAX protease self-immunity
NDK36_21840	COG0477	Major facilitator Superfamily
NDK36_21840	COG2814	Major facilitator Superfamily
NDK36_21845	COG0346	lactoylglutathione lyase activity
NDK36_21850	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
NDK36_21855	COG0542	response to heat
NDK36_21870	COG0708	Exodeoxyribonuclease III
NDK36_21875	COG0238	Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit
NDK36_21880	COG0629	single-stranded DNA binding
NDK36_21885	COG0360	Binds together with S18 to 16S ribosomal RNA
NDK36_21890	COG0012	GTP binding
NDK36_21895	COG0243	molybdopterin cofactor binding
NDK36_21900	COG4481	Protein conserved in bacteria
NDK36_21905	COG3949	Membrane
NDK36_21915	COG1475	DNA binding
NDK36_21920	COG1192	Involved in chromosome partitioning
NDK36_21930	COG1475	DNA binding
NDK36_21935	COG0357	Ribosomal RNA small subunit methyltransferase G
NDK36_21940	COG0445	tRNA wobble uridine modification
NDK36_21945	COG0486	Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34
NDK36_21950	COG1847	R3H domain protein
NDK36_21955	COG0706	membrane insertase activity
NDK36_21960	COG0594	ribonuclease P activity
NDK36_21975	COG1525	nuclease
NDK36_21990	COG1793	dna ligase
NDK36_22020	COG0582	viral genome integration into host DNA
NDK36_22035	COG0629	single-stranded DNA binding
NDK36_22240	COG0457	Tetratricopeptide repeat
NDK36_22285	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII