B4U62_00005 SM00382 ATPases associated with a variety of cellular activities B4U62_00005 SM00760 Bacterial dnaA protein helix-turn-helix domain B4U62_00010 SM00480 DNA polymerase III beta subunit B4U62_00030 SM00387 Histidine kinase-like ATPases B4U62_00030 SM00433 TopoisomeraseII B4U62_00035 SM00434 DNA Topoisomerase IV B4U62_00070 SM00116 Domain in cystathionine beta-synthase and other proteins. B4U62_00070 SM01240 B4U62_00070 B4U62_00075 SM00936 Penicillin-binding protein 5, C-terminal domain B4U62_00110 SM00257 Lysin motif B4U62_00110 SM00636 B4U62_00110 B4U62_00130 SM00382 ATPases associated with a variety of cellular activities B4U62_00140 SM00493 B4U62_00140 B4U62_00235 SM00465 GIY-YIG type nucleases (URI domain) B4U62_00245 SM00966 SpoVT / AbrB like domain B4U62_00260 SM01208 B4U62_00260 B4U62_00265 SM00493 B4U62_00265 B4U62_00270 SM00650 Ribosomal RNA adenine dimethylases B4U62_00315 SM01400 B4U62_00315 B4U62_00335 SM00487 DEAD-like helicases superfamily B4U62_00335 SM00490 helicase superfamily c-terminal domain B4U62_00335 SM00982 B4U62_00335 B4U62_00335 SM01058 CarD-like/TRCF domain B4U62_00340 SM00966 SpoVT / AbrB like domain B4U62_00355 SM00363 S4 RNA-binding domain B4U62_00375 SM00316 Ribosomal protein S1-like RNA-binding domain B4U62_00390 SM00331 Sigma factor PP2C-like phosphatases B4U62_00390 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain B4U62_00400 SM00220 Serine/Threonine protein kinases, catalytic domain B4U62_00405 SM00977 TilS substrate C-terminal domain B4U62_00415 SM00382 ATPases associated with a variety of cellular activities B4U62_00460 SM00905 Dihydroneopterin aldolase B4U62_00470 SM00530 Helix-turn-helix XRE-family like proteins B4U62_00575 SM00382 ATPases associated with a variety of cellular activities B4U62_00575 SM01086 C-terminal, D2-small domain, of ClpB protein B4U62_00580 SM00382 ATPases associated with a variety of cellular activities B4U62_00590 SM00670 Large family of predicted nucleotide-binding domains B4U62_00620 SM00840 B4U62_00620 B4U62_00625 SM00535 Ribonuclease III family B4U62_00630 SM00967 RNA 2'-O ribose methyltransferase substrate binding B4U62_00655 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. B4U62_00655 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. B4U62_00660 SM00649 Ribosomal protein L11/L12 B4U62_00690 SM00663 RNA polymerase I subunit A N-terminus B4U62_00710 SM00838 Elongation factor G C-terminus B4U62_00710 SM00889 Elongation factor G, domain IV B4U62_00725 SM01403 B4U62_00725 B4U62_00745 SM01382 B4U62_00745 B4U62_00745 SM01383 B4U62_00745 B4U62_00760 SM00322 K homology RNA-binding domain B4U62_00780 SM01374 B4U62_00780 B4U62_00785 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. B4U62_00850 SM00316 Ribosomal protein S1-like RNA-binding domain B4U62_00870 SM00662 RNA polymerases D B4U62_00880 SM00382 ATPases associated with a variety of cellular activities B4U62_00885 SM00382 ATPases associated with a variety of cellular activities B4U62_00920 SM00646 B4U62_00920 B4U62_00935 SM01251 B4U62_00935 B4U62_01055 SM00342 helix_turn_helix, arabinose operon control protein B4U62_01155 SM00478 endonuclease III B4U62_01160 SM00342 helix_turn_helix, arabinose operon control protein B4U62_01195 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor B4U62_01215 SM00729 Elongator protein 3, MiaB family, Radical SAM B4U62_01225 SM00382 ATPases associated with a variety of cellular activities B4U62_01250 SM00448 cheY-homologous receiver domain B4U62_01250 SM00862 Transcriptional regulatory protein, C terminal B4U62_01255 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain B4U62_01255 SM00388 His Kinase A (phosphoacceptor) domain B4U62_01335 SM00347 helix_turn_helix multiple antibiotic resistance protein B4U62_01365 SM00342 helix_turn_helix, arabinose operon control protein B4U62_01415 SM00342 helix_turn_helix, arabinose operon control protein B4U62_01420 SM00450 Rhodanese Homology Domain B4U62_01440 SM00345 helix_turn_helix gluconate operon transcriptional repressor B4U62_01440 SM00866 B4U62_01440 B4U62_01480 SM00387 Histidine kinase-like ATPases B4U62_01485 SM00448 cheY-homologous receiver domain B4U62_01495 SM01130 B4U62_01495 B4U62_01510 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain B4U62_01515 SM00345 helix_turn_helix gluconate operon transcriptional repressor B4U62_01515 SM00895 B4U62_01515 B4U62_01520 SM00858 B4U62_01520 B4U62_01540 SM00448 cheY-homologous receiver domain B4U62_01540 SM00862 Transcriptional regulatory protein, C terminal B4U62_01545 SM00387 Histidine kinase-like ATPases B4U62_01545 SM00388 His Kinase A (phosphoacceptor) domain B4U62_01550 SM00382 ATPases associated with a variety of cellular activities B4U62_01570 SM00327 von Willebrand factor (vWF) type A domain B4U62_01615 SM00870 B4U62_01615 B4U62_01635 SM00387 Histidine kinase-like ATPases B4U62_01640 SM00448 cheY-homologous receiver domain B4U62_01640 SM00850 LytTr DNA-binding domain B4U62_01645 SM00382 ATPases associated with a variety of cellular activities B4U62_01685 SM00028 Tetratricopeptide repeats B4U62_01695 SM00642 Alpha-amylase domain B4U62_01705 SM00382 ATPases associated with a variety of cellular activities B4U62_01765 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor B4U62_01770 SM00116 Domain in cystathionine beta-synthase and other proteins. B4U62_01770 SM00382 ATPases associated with a variety of cellular activities B4U62_01800 SM00632 B4U62_01800 B4U62_01800 SM00642 Alpha-amylase domain B4U62_01820 SM00347 helix_turn_helix multiple antibiotic resistance protein B4U62_01940 SM00926 Molybdopterin oxidoreductase Fe4S4 domain B4U62_01970 SM00833 Cobalamin synthesis protein cobW C-terminal domain B4U62_01980 SM00062 Bacterial periplasmic substrate-binding proteins B4U62_02010 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). B4U62_02010 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain B4U62_02020 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family B4U62_02030 SM00823 Phosphopantetheine attachment site B4U62_02030 SM01294 B4U62_02030 B4U62_02035 SM00823 Phosphopantetheine attachment site B4U62_02035 SM01294 B4U62_02035 B4U62_02040 SM00823 Phosphopantetheine attachment site B4U62_02065 SM00345 helix_turn_helix gluconate operon transcriptional repressor B4U62_02080 SM00382 ATPases associated with a variety of cellular activities B4U62_02090 SM00062 Bacterial periplasmic substrate-binding proteins B4U62_02130 SM00710 Parallel beta-helix repeats B4U62_02130 SM00722 Domain present in carbohydrate binding proteins and sugar hydrolses B4U62_02155 SM00382 ATPases associated with a variety of cellular activities B4U62_02165 SM00448 cheY-homologous receiver domain B4U62_02165 SM00862 Transcriptional regulatory protein, C terminal B4U62_02170 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain B4U62_02170 SM00387 Histidine kinase-like ATPases B4U62_02170 SM00388 His Kinase A (phosphoacceptor) domain B4U62_02175 SM00028 Tetratricopeptide repeats B4U62_02210 SM00382 ATPases associated with a variety of cellular activities B4U62_02240 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor B4U62_02245 SM00345 helix_turn_helix gluconate operon transcriptional repressor B4U62_02280 SM00420 helix_turn_helix, Deoxyribose operon repressor B4U62_02305 SM01329 B4U62_02305 B4U62_02350 SM00796 Allophanate hydrolase subunit 1 B4U62_02355 SM00797 Allophanate hydrolase subunit 2 B4U62_02360 SM00346 helix_turn_helix isocitrate lyase regulation B4U62_02435 SM00344 helix_turn_helix ASNC type B4U62_02440 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain B4U62_02440 SM00437 Bacterial DNA topoisomerase I DNA-binding domain B4U62_02440 SM00493 B4U62_02440 B4U62_02450 SM00267 diguanylate cyclase B4U62_02540 SM00091 PAS domain B4U62_02540 SM00387 Histidine kinase-like ATPases B4U62_02545 SM00448 cheY-homologous receiver domain B4U62_02560 SM00382 ATPases associated with a variety of cellular activities B4U62_02615 SM00487 DEAD-like helicases superfamily B4U62_02615 SM00490 helicase superfamily c-terminal domain B4U62_02645 SM01005 Alanine racemase, C-terminal domain B4U62_02670 SM00387 Histidine kinase-like ATPases B4U62_02675 SM00331 Sigma factor PP2C-like phosphatases B4U62_02695 SM00331 Sigma factor PP2C-like phosphatases B4U62_02695 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain B4U62_02715 SM00347 helix_turn_helix multiple antibiotic resistance protein B4U62_02720 SM00316 Ribosomal protein S1-like RNA-binding domain B4U62_02720 SM00732 Likely ribonuclease with RNase H fold. B4U62_02725 SM00731 SprT homologues. B4U62_02775 SM00530 Helix-turn-helix XRE-family like proteins B4U62_02870 SM00255 Toll - interleukin 1 - resistance B4U62_02875 SM00028 Tetratricopeptide repeats B4U62_02895 SM00344 helix_turn_helix ASNC type B4U62_02900 SM00344 helix_turn_helix ASNC type B4U62_02940 SM00357 Cold shock protein domain B4U62_02945 SM01058 CarD-like/TRCF domain B4U62_02960 SM00342 helix_turn_helix, arabinose operon control protein B4U62_02970 SM00342 helix_turn_helix, arabinose operon control protein B4U62_02970 SM00871 Bacterial transcription activator, effector binding domain B4U62_02975 SM00345 helix_turn_helix gluconate operon transcriptional repressor B4U62_03005 SM00345 helix_turn_helix gluconate operon transcriptional repressor B4U62_03055 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor B4U62_03080 SM00345 helix_turn_helix gluconate operon transcriptional repressor B4U62_03090 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor B4U62_03110 SM00387 Histidine kinase-like ATPases B4U62_03115 SM00421 helix_turn_helix, Lux Regulon B4U62_03115 SM00448 cheY-homologous receiver domain B4U62_03135 SM00422 helix_turn_helix, mercury resistance B4U62_03135 SM00871 Bacterial transcription activator, effector binding domain B4U62_03215 SM00382 ATPases associated with a variety of cellular activities B4U62_03230 SM00347 helix_turn_helix multiple antibiotic resistance protein B4U62_03245 SM00347 helix_turn_helix multiple antibiotic resistance protein B4U62_03245 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor B4U62_03260 SM00345 helix_turn_helix gluconate operon transcriptional repressor B4U62_03260 SM00895 B4U62_03260 B4U62_03265 SM00257 Lysin motif B4U62_03265 SM00636 B4U62_03265 B4U62_03280 SM00098 Alkaline phosphatase homologues B4U62_03300 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. B4U62_03335 SM00345 helix_turn_helix gluconate operon transcriptional repressor B4U62_03335 SM00866 B4U62_03335 B4U62_03420 SM00382 ATPases associated with a variety of cellular activities B4U62_03430 SM00881 CoA binding domain B4U62_03455 SM00883 Chaperonin 10 Kd subunit B4U62_03535 SM00028 Tetratricopeptide repeats B4U62_03535 SM00382 ATPases associated with a variety of cellular activities B4U62_03540 SM00829 Enoylreductase B4U62_03585 SM00829 Enoylreductase B4U62_03650 SM00460 Transglutaminase/protease-like homologues B4U62_03685 SM01001 AIR carboxylase B4U62_03695 SM00998 Adenylosuccinate lyase C-terminus B4U62_03710 SM01211 B4U62_03710 B4U62_03735 SM00798 AICARFT/IMPCHase bienzyme B4U62_03735 SM00851 MGS-like domain B4U62_03740 SM01209 B4U62_03740 B4U62_03740 SM01210 B4U62_03740 B4U62_03745 SM00344 helix_turn_helix ASNC type B4U62_03790 SM00278 Helix-hairpin-helix DNA-binding motif class 1 B4U62_03790 SM00292 breast cancer carboxy-terminal domain B4U62_03790 SM00532 Ligase N family B4U62_03825 SM00845 GatB domain B4U62_03840 SM00046 Diacylglycerol kinase catalytic domain (presumed) B4U62_03865 SM00487 DEAD-like helicases superfamily B4U62_03870 SM00974 B4U62_03870 B4U62_03900 SM00028 Tetratricopeptide repeats B4U62_03965 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain B4U62_03965 SM00387 Histidine kinase-like ATPases B4U62_03970 SM00342 helix_turn_helix, arabinose operon control protein B4U62_03970 SM00448 cheY-homologous receiver domain B4U62_03995 SM00342 helix_turn_helix, arabinose operon control protein B4U62_04100 SM00347 helix_turn_helix multiple antibiotic resistance protein B4U62_04170 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). B4U62_04175 SM00382 ATPases associated with a variety of cellular activities B4U62_04185 SM00422 helix_turn_helix, mercury resistance B4U62_04205 SM00382 ATPases associated with a variety of cellular activities B4U62_04210 SM00487 DEAD-like helicases superfamily B4U62_04210 SM00490 helicase superfamily c-terminal domain B4U62_04220 SM00829 Enoylreductase B4U62_04240 SM00382 ATPases associated with a variety of cellular activities B4U62_04275 SM00656 B4U62_04275 B4U62_04285 SM00387 Histidine kinase-like ATPases B4U62_04290 SM00448 cheY-homologous receiver domain B4U62_04305 SM00849 Metallo-beta-lactamase superfamily B4U62_04395 SM00642 Alpha-amylase domain B4U62_04400 SM00345 helix_turn_helix gluconate operon transcriptional repressor B4U62_04400 SM00866 B4U62_04400 B4U62_04430 SM00226 Low molecular weight phosphatase family B4U62_04490 SM00478 endonuclease III B4U62_04525 SM00861 Transketolase, pyrimidine binding domain B4U62_04540 SM00382 ATPases associated with a variety of cellular activities B4U62_04595 SM00382 ATPases associated with a variety of cellular activities B4U62_04600 SM00382 ATPases associated with a variety of cellular activities B4U62_04615 SM00342 helix_turn_helix, arabinose operon control protein B4U62_04635 SM00387 Histidine kinase-like ATPases B4U62_04640 SM00421 helix_turn_helix, Lux Regulon B4U62_04640 SM00448 cheY-homologous receiver domain B4U62_04645 SM00382 ATPases associated with a variety of cellular activities B4U62_04695 SM00347 helix_turn_helix multiple antibiotic resistance protein B4U62_04770 SM00287 Bacterial SH3 domain homologues B4U62_04800 SM00478 endonuclease III B4U62_04800 SM00525 B4U62_04800 B4U62_04830 SM00382 ATPases associated with a variety of cellular activities B4U62_04995 SM01060 B4U62_04995 B4U62_05000 SM00382 ATPases associated with a variety of cellular activities B4U62_05005 SM00062 Bacterial periplasmic substrate-binding proteins B4U62_05035 SM00530 Helix-turn-helix XRE-family like proteins B4U62_05050 SM00567 E-Z type HEAT repeats B4U62_05080 SM00763 PrkA AAA domain B4U62_05090 SM00347 helix_turn_helix multiple antibiotic resistance protein B4U62_05125 SM00345 helix_turn_helix gluconate operon transcriptional repressor B4U62_05130 SM00382 ATPases associated with a variety of cellular activities B4U62_05135 SM00382 ATPases associated with a variety of cellular activities B4U62_05145 SM00357 Cold shock protein domain B4U62_05160 SM00267 diguanylate cyclase B4U62_05190 SM00318 Staphylococcal nuclease homologues B4U62_05200 SM00363 S4 RNA-binding domain B4U62_05210 SM00116 Domain in cystathionine beta-synthase and other proteins. B4U62_05255 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. B4U62_05255 SM00387 Histidine kinase-like ATPases B4U62_05260 SM00421 helix_turn_helix, Lux Regulon B4U62_05260 SM00448 cheY-homologous receiver domain B4U62_05280 SM00257 Lysin motif B4U62_05300 SM00098 Alkaline phosphatase homologues B4U62_05305 SM00257 Lysin motif B4U62_05335 SM00345 helix_turn_helix gluconate operon transcriptional repressor B4U62_05365 SM00563 Phosphate acyltransferases B4U62_05370 SM01091 Transporter associated domain B4U62_05375 SM00422 helix_turn_helix, mercury resistance B4U62_05385 SM01091 Transporter associated domain B4U62_05445 SM00382 ATPases associated with a variety of cellular activities B4U62_05505 SM00729 Elongator protein 3, MiaB family, Radical SAM B4U62_05535 SM00382 ATPases associated with a variety of cellular activities B4U62_05555 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. B4U62_05595 SM00347 helix_turn_helix multiple antibiotic resistance protein B4U62_05625 SM00382 ATPases associated with a variety of cellular activities B4U62_05710 SM01022 B4U62_05710 B4U62_05725 SM00849 Metallo-beta-lactamase superfamily B4U62_05765 SM00829 Enoylreductase B4U62_05775 SM00855 Phosphoglycerate mutase family B4U62_05795 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). B4U62_05810 SM00914 B4U62_05810 B4U62_05825 SM00894 Excalibur calcium-binding domain B4U62_05860 SM00347 helix_turn_helix multiple antibiotic resistance protein B4U62_05885 SM00354 helix_turn _helix lactose operon repressor B4U62_06020 SM00342 helix_turn_helix, arabinose operon control protein B4U62_06025 SM00354 helix_turn _helix lactose operon repressor B4U62_06045 SM00345 helix_turn_helix gluconate operon transcriptional repressor B4U62_06090 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain B4U62_06120 SM00316 Ribosomal protein S1-like RNA-binding domain B4U62_06130 SM00752 Horizontally Transferred TransMembrane Domain B4U62_06210 SM00859 Semialdehyde dehydrogenase, NAD binding domain B4U62_06230 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain B4U62_06235 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain B4U62_06285 SM00825 Beta-ketoacyl synthase B4U62_06295 SM00382 ATPases associated with a variety of cellular activities B4U62_06300 SM00382 ATPases associated with a variety of cellular activities B4U62_06345 SM00382 ATPases associated with a variety of cellular activities B4U62_06350 SM00382 ATPases associated with a variety of cellular activities B4U62_06415 SM01118 B4U62_06415 B4U62_06425 SM00954 Region found in RelA / SpoT proteins B4U62_06645 SM00635 Bacterial Ig-like domain 2 B4U62_06740 SM00926 Molybdopterin oxidoreductase Fe4S4 domain B4U62_06740 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region B4U62_06790 SM00382 ATPases associated with a variety of cellular activities B4U62_06800 SM00835 Cupin B4U62_06830 SM00829 Enoylreductase B4U62_06850 SM00354 helix_turn _helix lactose operon repressor B4U62_06860 SM00858 B4U62_06860 B4U62_06875 SM00382 ATPases associated with a variety of cellular activities B4U62_06880 SM00028 Tetratricopeptide repeats B4U62_06895 SM00257 Lysin motif B4U62_06895 SM00644 B4U62_06895 B4U62_06920 SM00530 Helix-turn-helix XRE-family like proteins B4U62_06935 SM00382 ATPases associated with a variety of cellular activities B4U62_07035 SM00257 Lysin motif B4U62_07100 SM00257 Lysin motif B4U62_07100 SM00644 B4U62_07100 B4U62_07145 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. B4U62_07170 SM00382 ATPases associated with a variety of cellular activities B4U62_07185 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain B4U62_07195 SM00382 ATPases associated with a variety of cellular activities B4U62_07255 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase B4U62_07270 SM00347 helix_turn_helix multiple antibiotic resistance protein B4U62_07310 SM00382 ATPases associated with a variety of cellular activities B4U62_07325 SM00448 cheY-homologous receiver domain B4U62_07325 SM00862 Transcriptional regulatory protein, C terminal B4U62_07330 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain B4U62_07330 SM00387 Histidine kinase-like ATPases B4U62_07330 SM00388 His Kinase A (phosphoacceptor) domain B4U62_07355 SM00116 Domain in cystathionine beta-synthase and other proteins. B4U62_07355 SM00924 MgtE intracellular N domain B4U62_07360 SM00422 helix_turn_helix, mercury resistance B4U62_07375 SM00347 helix_turn_helix multiple antibiotic resistance protein B4U62_07410 SM00559 Ku70 and Ku80 are 70kDa and 80kDa subunits of the Lupus Ku autoantigen B4U62_07415 SM00052 Putative diguanylate phosphodiesterase B4U62_07415 SM00267 diguanylate cyclase B4U62_07475 SM00091 PAS domain B4U62_07475 SM00387 Histidine kinase-like ATPases B4U62_07475 SM00388 His Kinase A (phosphoacceptor) domain B4U62_07515 SM01007 Class II Aldolase and Adducin N-terminal domain B4U62_07540 SM00387 Histidine kinase-like ATPases B4U62_07540 SM00388 His Kinase A (phosphoacceptor) domain B4U62_07545 SM00347 helix_turn_helix multiple antibiotic resistance protein B4U62_07560 SM00382 ATPases associated with a variety of cellular activities B4U62_07560 SM01086 C-terminal, D2-small domain, of ClpB protein B4U62_07595 SM00822 B4U62_07595 B4U62_07600 SM00257 Lysin motif B4U62_07605 SM00257 Lysin motif B4U62_07610 SM00636 B4U62_07610 B4U62_07665 SM00354 helix_turn _helix lactose operon repressor B4U62_07670 SM01061 CAT RNA binding domain B4U62_07705 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). B4U62_07705 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain B4U62_07725 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) B4U62_07725 SM00091 PAS domain B4U62_07725 SM00387 Histidine kinase-like ATPases B4U62_07725 SM00388 His Kinase A (phosphoacceptor) domain B4U62_07740 SM00260 Two component signalling adaptor domain B4U62_07740 SM00448 cheY-homologous receiver domain B4U62_07755 SM00257 Lysin motif B4U62_07785 SM00052 Putative diguanylate phosphodiesterase B4U62_07880 SM00852 Probable molybdopterin binding domain B4U62_07900 SM00382 ATPases associated with a variety of cellular activities B4U62_07905 SM00382 ATPases associated with a variety of cellular activities B4U62_07920 SM00382 ATPases associated with a variety of cellular activities B4U62_07925 SM01066 Carbohydrate binding domain B4U62_07930 SM00420 helix_turn_helix, Deoxyribose operon repressor B4U62_07930 SM01134 B4U62_07930 B4U62_07955 SM00382 ATPases associated with a variety of cellular activities B4U62_07980 SM00966 SpoVT / AbrB like domain B4U62_07985 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) B4U62_07985 SM00091 PAS domain B4U62_07985 SM00387 Histidine kinase-like ATPases B4U62_07985 SM00388 His Kinase A (phosphoacceptor) domain B4U62_08005 SM00849 Metallo-beta-lactamase superfamily B4U62_08040 SM00861 Transketolase, pyrimidine binding domain B4U62_08135 SM00838 Elongation factor G C-terminus B4U62_08155 SM00670 Large family of predicted nucleotide-binding domains B4U62_08180 SM00878 Biotin carboxylase C-terminal domain B4U62_08225 SM00116 Domain in cystathionine beta-synthase and other proteins. B4U62_08275 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. B4U62_08335 SM00740 B4U62_08335 B4U62_08340 SM00740 B4U62_08340 B4U62_08395 SM00842 Cell division protein FtsA B4U62_08400 SM00864 Tubulin/FtsZ family, GTPase domain B4U62_08400 SM00865 Tubulin/FtsZ family, C-terminal domain B4U62_08425 SM00382 ATPases associated with a variety of cellular activities B4U62_08460 SM00363 S4 RNA-binding domain B4U62_08485 SM00363 S4 RNA-binding domain B4U62_08510 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain B4U62_08515 SM00851 MGS-like domain B4U62_08515 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain B4U62_08515 SM01209 B4U62_08515 B4U62_08530 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family B4U62_08580 SM00831 Cation transporter/ATPase, N-terminus B4U62_08595 SM00072 Guanylate kinase homologues. B4U62_08600 SM01409 B4U62_08600 B4U62_08610 SM00487 DEAD-like helicases superfamily B4U62_08610 SM00490 helicase superfamily c-terminal domain B4U62_08635 SM00331 Sigma factor PP2C-like phosphatases B4U62_08635 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain B4U62_08640 SM00220 Serine/Threonine protein kinases, catalytic domain B4U62_08640 SM00740 B4U62_08640 B4U62_08655 SM00983 Thiamin pyrophosphokinase, vitamin B1 binding domain B4U62_08675 SM01120 B4U62_08675 B4U62_08675 SM01121 B4U62_08675 B4U62_08690 SM00487 DEAD-like helicases superfamily B4U62_08690 SM00490 helicase superfamily c-terminal domain B4U62_08705 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. B4U62_08710 SM00822 B4U62_08710 B4U62_08720 SM00358 Double-stranded RNA binding motif B4U62_08720 SM00535 Ribonuclease III family B4U62_08725 SM00968 SMC proteins Flexible Hinge Domain B4U62_08730 SM00382 ATPases associated with a variety of cellular activities B4U62_08730 SM00962 SRP54-type protein, GTPase domain B4U62_08730 SM00963 SRP54-type protein, helical bundle domain B4U62_08745 SM00382 ATPases associated with a variety of cellular activities B4U62_08745 SM00962 SRP54-type protein, GTPase domain B4U62_08745 SM00963 SRP54-type protein, helical bundle domain B4U62_08805 SM00881 CoA binding domain B4U62_08815 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain B4U62_08815 SM00437 Bacterial DNA topoisomerase I DNA-binding domain B4U62_08815 SM00493 B4U62_08815 B4U62_08835 SM00382 ATPases associated with a variety of cellular activities B4U62_08835 SM01086 C-terminal, D2-small domain, of ClpB protein B4U62_08875 SM00382 ATPases associated with a variety of cellular activities B4U62_08925 SM00448 cheY-homologous receiver domain B4U62_08960 SM00962 SRP54-type protein, GTPase domain B4U62_08970 SM00448 cheY-homologous receiver domain B4U62_08975 SM00073 Histidine Phosphotransfer domain B4U62_08975 SM00260 Two component signalling adaptor domain B4U62_08975 SM00387 Histidine kinase-like ATPases B4U62_08975 SM01231 B4U62_08975 B4U62_08980 SM00260 Two component signalling adaptor domain B4U62_09040 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. B4U62_09050 SM00479 B4U62_09050 B4U62_09050 SM00481 DNA polymerase alpha chain like domain B4U62_09060 SM00316 Ribosomal protein S1-like RNA-binding domain B4U62_09060 SM00322 K homology RNA-binding domain B4U62_09095 SM00904 Riboflavin kinase B4U62_09100 SM01387 B4U62_09100 B4U62_09105 SM00316 Ribosomal protein S1-like RNA-binding domain B4U62_09105 SM00322 K homology RNA-binding domain B4U62_09135 SM00859 Semialdehyde dehydrogenase, NAD binding domain B4U62_09145 SM01130 B4U62_09145 B4U62_09150 SM00849 Metallo-beta-lactamase superfamily B4U62_09165 SM00382 ATPases associated with a variety of cellular activities B4U62_09165 SM00843 B4U62_09165 B4U62_09170 SM00345 helix_turn_helix gluconate operon transcriptional repressor B4U62_09170 SM00866 B4U62_09170 B4U62_09215 SM00852 Probable molybdopterin binding domain B4U62_09220 SM00382 ATPases associated with a variety of cellular activities B4U62_09230 SM00322 K homology RNA-binding domain B4U62_09230 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. B4U62_09245 SM00829 Enoylreductase B4U62_09255 SM00729 Elongator protein 3, MiaB family, Radical SAM B4U62_09270 SM00533 DNA-binding domain of DNA mismatch repair MUTS family B4U62_09270 SM00534 ATPase domain of DNA mismatch repair MUTS family B4U62_09275 SM00853 MutL C terminal dimerisation domain B4U62_09275 SM01340 B4U62_09275 B4U62_09295 SM00849 Metallo-beta-lactamase superfamily B4U62_09305 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. B4U62_09310 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. B4U62_09315 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. B4U62_09325 SM00825 Beta-ketoacyl synthase B4U62_09345 SM00822 B4U62_09345 B4U62_09345 SM00823 Phosphopantetheine attachment site B4U62_09345 SM00825 Beta-ketoacyl synthase B4U62_09345 SM00826 B4U62_09345 B4U62_09345 SM01294 B4U62_09345 B4U62_09350 SM00822 B4U62_09350 B4U62_09350 SM00823 Phosphopantetheine attachment site B4U62_09350 SM00825 Beta-ketoacyl synthase B4U62_09350 SM00826 B4U62_09350 B4U62_09350 SM01294 B4U62_09350 B4U62_09355 SM00822 B4U62_09355 B4U62_09355 SM00823 Phosphopantetheine attachment site B4U62_09355 SM00825 Beta-ketoacyl synthase B4U62_09355 SM00826 B4U62_09355 B4U62_09355 SM01294 B4U62_09355 B4U62_09360 SM00822 B4U62_09360 B4U62_09360 SM00823 Phosphopantetheine attachment site B4U62_09360 SM00825 Beta-ketoacyl synthase B4U62_09360 SM00826 B4U62_09360 B4U62_09360 SM01294 B4U62_09360 B4U62_09365 SM00823 Phosphopantetheine attachment site B4U62_09365 SM00825 Beta-ketoacyl synthase B4U62_09365 SM01294 B4U62_09365 B4U62_09380 SM00849 Metallo-beta-lactamase superfamily B4U62_09460 SM00646 B4U62_09460 B4U62_09470 SM00382 ATPases associated with a variety of cellular activities B4U62_09485 SM00422 helix_turn_helix, mercury resistance B4U62_09490 SM01230 B4U62_09490 B4U62_09510 SM00860 SMI1 / KNR4 family B4U62_09580 SM00318 Staphylococcal nuclease homologues B4U62_09590 SM01005 Alanine racemase, C-terminal domain B4U62_09720 SM00257 Lysin motif B4U62_09725 SM00857 Resolvase, N terminal domain B4U62_09735 SM00861 Transketolase, pyrimidine binding domain B4U62_09760 SM00448 cheY-homologous receiver domain B4U62_09830 SM01207 B4U62_09830 B4U62_09835 SM00881 CoA binding domain B4U62_09840 SM00387 Histidine kinase-like ATPases B4U62_09840 SM00433 TopoisomeraseII B4U62_09845 SM00434 DNA Topoisomerase IV B4U62_09860 SM01067 Cellulose binding domain B4U62_09875 SM00606 Cellulose Binding Domain Type IV B4U62_09925 SM00878 Biotin carboxylase C-terminal domain B4U62_09955 SM00823 Phosphopantetheine attachment site B4U62_09955 SM00824 Thioesterase B4U62_09960 SM00823 Phosphopantetheine attachment site B4U62_09965 SM00823 Phosphopantetheine attachment site B4U62_09965 SM01294 B4U62_09965 B4U62_09970 SM00823 Phosphopantetheine attachment site B4U62_09975 SM00823 Phosphopantetheine attachment site B4U62_10025 SM00829 Enoylreductase B4U62_10045 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase B4U62_10060 SM00822 B4U62_10060 B4U62_10095 SM00926 Molybdopterin oxidoreductase Fe4S4 domain B4U62_10120 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). B4U62_10120 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain B4U62_10140 SM00656 B4U62_10140 B4U62_10155 SM00835 Cupin B4U62_10195 SM00530 Helix-turn-helix XRE-family like proteins B4U62_10265 SM00530 Helix-turn-helix XRE-family like proteins B4U62_10355 SM00860 SMI1 / KNR4 family B4U62_10365 SM00860 SMI1 / KNR4 family B4U62_10375 SM00710 Parallel beta-helix repeats B4U62_10385 SM00342 helix_turn_helix, arabinose operon control protein B4U62_10400 SM00849 Metallo-beta-lactamase superfamily B4U62_10405 SM00871 Bacterial transcription activator, effector binding domain B4U62_10420 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor B4U62_10460 SM00421 helix_turn_helix, Lux Regulon B4U62_10460 SM00448 cheY-homologous receiver domain B4U62_10465 SM00257 Lysin motif B4U62_10470 SM00341 Helicase and RNase D C-terminal B4U62_10470 SM00487 DEAD-like helicases superfamily B4U62_10470 SM00490 helicase superfamily c-terminal domain B4U62_10470 SM00956 B4U62_10470 B4U62_10560 SM00861 Transketolase, pyrimidine binding domain B4U62_10565 SM00327 von Willebrand factor (vWF) type A domain B4U62_10570 SM00382 ATPases associated with a variety of cellular activities B4U62_10580 SM00257 Lysin motif B4U62_10675 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. B4U62_10675 SM00245 tail specific protease B4U62_10710 SM00014 Acid phosphatase homologues B4U62_10760 SM00882 Coenzyme A transferase B4U62_10765 SM00882 Coenzyme A transferase B4U62_10825 SM00530 Helix-turn-helix XRE-family like proteins B4U62_10910 SM00871 Bacterial transcription activator, effector binding domain B4U62_10930 SM00507 HNH nucleases B4U62_11085 SM00481 DNA polymerase alpha chain like domain B4U62_11140 SM00710 Parallel beta-helix repeats B4U62_11210 SM00507 HNH nucleases B4U62_11305 SM00530 Helix-turn-helix XRE-family like proteins B4U62_11325 SM00530 Helix-turn-helix XRE-family like proteins B4U62_11440 SM00530 Helix-turn-helix XRE-family like proteins B4U62_11455 SM00411 bacterial (prokaryotic) histone like domain B4U62_11650 SM00644 B4U62_11650 B4U62_11680 SM00382 ATPases associated with a variety of cellular activities B4U62_11725 SM00860 SMI1 / KNR4 family B4U62_11730 SM00860 SMI1 / KNR4 family B4U62_11740 SM00860 SMI1 / KNR4 family B4U62_11755 SM00318 Staphylococcal nuclease homologues B4U62_11755 SM00894 Excalibur calcium-binding domain B4U62_11780 SM00857 Resolvase, N terminal domain B4U62_11800 SM00347 helix_turn_helix multiple antibiotic resistance protein B4U62_11840 SM00382 ATPases associated with a variety of cellular activities B4U62_11890 SM00567 E-Z type HEAT repeats B4U62_11890 SM00932 Scaffold protein Nfu/NifU N terminal B4U62_11895 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. B4U62_11915 SM00357 Cold shock protein domain B4U62_11955 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs B4U62_11955 SM00475 5'-3' exonuclease B4U62_12020 SM00354 helix_turn _helix lactose operon repressor B4U62_12035 SM00491 B4U62_12035 B4U62_12050 SM00981 B4U62_12050 B4U62_12080 SM00487 DEAD-like helicases superfamily B4U62_12080 SM00490 helicase superfamily c-terminal domain B4U62_12140 SM00478 endonuclease III B4U62_12140 SM00525 B4U62_12140 B4U62_12170 SM00479 B4U62_12170 B4U62_12170 SM00487 DEAD-like helicases superfamily B4U62_12170 SM00491 B4U62_12170 B4U62_12210 SM00851 MGS-like domain B4U62_12260 SM00914 B4U62_12260 B4U62_12265 SM00028 Tetratricopeptide repeats B4U62_12330 SM00138 Methyltransferase, chemotaxis proteins B4U62_12335 SM00562 B4U62_12335 B4U62_12365 SM00411 bacterial (prokaryotic) histone like domain B4U62_12415 SM01240 B4U62_12415 B4U62_12420 SM00316 Ribosomal protein S1-like RNA-binding domain B4U62_12460 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase B4U62_12480 SM00257 Lysin motif B4U62_12490 SM00487 DEAD-like helicases superfamily B4U62_12490 SM00490 helicase superfamily c-terminal domain B4U62_12530 SM00091 PAS domain B4U62_12530 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain B4U62_12530 SM00387 Histidine kinase-like ATPases B4U62_12530 SM00388 His Kinase A (phosphoacceptor) domain B4U62_12535 SM00448 cheY-homologous receiver domain B4U62_12535 SM00862 Transcriptional regulatory protein, C terminal B4U62_12555 SM00363 S4 RNA-binding domain B4U62_12570 SM00936 Penicillin-binding protein 5, C-terminal domain B4U62_12720 SM00387 Histidine kinase-like ATPases B4U62_12730 SM00936 Penicillin-binding protein 5, C-terminal domain B4U62_12770 SM00919 Malic enzyme, NAD binding domain B4U62_12770 SM01274 B4U62_12770 B4U62_12785 SM00870 B4U62_12785 B4U62_12790 SM00530 Helix-turn-helix XRE-family like proteins B4U62_12895 SM00849 Metallo-beta-lactamase superfamily B4U62_12925 SM00849 Metallo-beta-lactamase superfamily B4U62_12935 SM01350 B4U62_12935 B4U62_12985 SM00382 ATPases associated with a variety of cellular activities B4U62_12995 SM00062 Bacterial periplasmic substrate-binding proteins B4U62_12995 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. B4U62_13005 SM00046 Diacylglycerol kinase catalytic domain (presumed) B4U62_13015 SM00422 helix_turn_helix, mercury resistance B4U62_13025 SM00861 Transketolase, pyrimidine binding domain B4U62_13040 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase B4U62_13050 SM00091 PAS domain B4U62_13050 SM00382 ATPases associated with a variety of cellular activities B4U62_13095 SM00646 B4U62_13095 B4U62_13110 SM00448 cheY-homologous receiver domain B4U62_13115 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. B4U62_13130 SM00363 S4 RNA-binding domain B4U62_13135 SM00861 Transketolase, pyrimidine binding domain B4U62_13170 SM00878 Biotin carboxylase C-terminal domain B4U62_13215 SM00382 ATPases associated with a variety of cellular activities B4U62_13225 SM00841 Elongation factor P, C-terminal B4U62_13225 SM01185 B4U62_13225 B4U62_13260 SM00529 Helix-turn-helix diphteria tox regulatory element B4U62_13270 SM00450 Rhodanese Homology Domain B4U62_13290 SM00487 DEAD-like helicases superfamily B4U62_13290 SM00490 helicase superfamily c-terminal domain B4U62_13305 SM00530 Helix-turn-helix XRE-family like proteins B4U62_13365 SM00382 ATPases associated with a variety of cellular activities B4U62_13380 SM01091 Transporter associated domain B4U62_13405 SM00849 Metallo-beta-lactamase superfamily B4U62_13425 SM00631 B4U62_13425 B4U62_13445 SM00028 Tetratricopeptide repeats B4U62_13485 SM00382 ATPases associated with a variety of cellular activities B4U62_13490 SM00382 ATPases associated with a variety of cellular activities B4U62_13540 SM00257 Lysin motif B4U62_13575 SM00518 AP endonuclease family 2 B4U62_13580 SM00487 DEAD-like helicases superfamily B4U62_13580 SM00490 helicase superfamily c-terminal domain B4U62_13620 SM00400 zinc finger B4U62_13620 SM00493 B4U62_13620 B4U62_13635 SM00116 Domain in cystathionine beta-synthase and other proteins. B4U62_13680 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. B4U62_13730 SM00729 Elongator protein 3, MiaB family, Radical SAM B4U62_13745 SM00271 DnaJ molecular chaperone homology domain B4U62_13765 SM00729 Elongator protein 3, MiaB family, Radical SAM B4U62_13770 SM00838 Elongation factor G C-terminus B4U62_13805 SM00849 Metallo-beta-lactamase superfamily B4U62_13815 SM00278 Helix-hairpin-helix DNA-binding motif class 1 B4U62_13835 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. B4U62_13845 SM01103 B4U62_13845 B4U62_13875 SM00644 B4U62_13875 B4U62_13885 SM01350 B4U62_13885 B4U62_13905 SM00857 Resolvase, N terminal domain B4U62_13915 SM00226 Low molecular weight phosphatase family B4U62_13930 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor B4U62_13940 SM00028 Tetratricopeptide repeats B4U62_13975 SM00644 B4U62_13975 B4U62_14035 SM00257 Lysin motif B4U62_14170 SM00382 ATPases associated with a variety of cellular activities B4U62_14200 SM00530 Helix-turn-helix XRE-family like proteins B4U62_14210 SM00530 Helix-turn-helix XRE-family like proteins B4U62_14215 SM00530 Helix-turn-helix XRE-family like proteins B4U62_14255 SM00388 His Kinase A (phosphoacceptor) domain B4U62_14260 SM00448 cheY-homologous receiver domain B4U62_14260 SM00862 Transcriptional regulatory protein, C terminal B4U62_14305 SM00450 Rhodanese Homology Domain B4U62_14350 SM00422 helix_turn_helix, mercury resistance B4U62_14365 SM01091 Transporter associated domain B4U62_14425 SM00344 helix_turn_helix ASNC type B4U62_14540 SM00287 Bacterial SH3 domain homologues B4U62_14580 SM00422 helix_turn_helix, mercury resistance B4U62_14590 SM00829 Enoylreductase B4U62_14600 SM00640 Glycosyl hydrolases family 32 B4U62_14625 SM00382 ATPases associated with a variety of cellular activities B4U62_14695 SM00926 Molybdopterin oxidoreductase Fe4S4 domain B4U62_14695 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region B4U62_14725 SM00650 Ribosomal RNA adenine dimethylases B4U62_14780 SM00732 Likely ribonuclease with RNase H fold. B4U62_14790 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain B4U62_14800 SM00382 ATPases associated with a variety of cellular activities B4U62_14805 SM00062 Bacterial periplasmic substrate-binding proteins B4U62_14805 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. B4U62_14835 SM00382 ATPases associated with a variety of cellular activities B4U62_14840 SM00028 Tetratricopeptide repeats B4U62_14860 SM00382 ATPases associated with a variety of cellular activities B4U62_14890 SM00287 Bacterial SH3 domain homologues B4U62_14890 SM00646 B4U62_14890 B4U62_14900 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. B4U62_14900 SM00954 Region found in RelA / SpoT proteins B4U62_14950 SM01323 B4U62_14950 B4U62_14970 SM00382 ATPases associated with a variety of cellular activities B4U62_14975 SM00278 Helix-hairpin-helix DNA-binding motif class 1 B4U62_15025 SM00257 Lysin motif B4U62_15070 SM01317 B4U62_15070 B4U62_15165 SM00257 Lysin motif B4U62_15175 SM01004 Delta-aminolevulinic acid dehydratase B4U62_15210 SM00382 ATPases associated with a variety of cellular activities B4U62_15210 SM00464 Found in ATP-dependent protease La (LON) B4U62_15215 SM00382 ATPases associated with a variety of cellular activities B4U62_15220 SM00382 ATPases associated with a variety of cellular activities B4U62_15220 SM00994 ClpX C4-type zinc finger B4U62_15220 SM01086 C-terminal, D2-small domain, of ClpB protein B4U62_15245 SM01329 B4U62_15245 B4U62_15250 SM00917 LeuA allosteric (dimerisation) domain B4U62_15310 SM00909 Sporulation and spore germination B4U62_15320 SM00347 helix_turn_helix multiple antibiotic resistance protein B4U62_15325 SM00421 helix_turn_helix, Lux Regulon B4U62_15365 SM00465 GIY-YIG type nucleases (URI domain) B4U62_15380 SM00813 Alpha-L-arabinofuranosidase C-terminus B4U62_15385 SM00893 Electron transfer flavoprotein domain B4U62_15390 SM00893 Electron transfer flavoprotein domain B4U62_15415 SM00463 Small MutS-related domain B4U62_15415 SM00533 DNA-binding domain of DNA mismatch repair MUTS family B4U62_15415 SM00534 ATPase domain of DNA mismatch repair MUTS family B4U62_15420 SM00278 Helix-hairpin-helix DNA-binding motif class 1 B4U62_15420 SM00481 DNA polymerase alpha chain like domain B4U62_15420 SM00483 DNA polymerase X family B4U62_15440 SM00873 B3/4 domain B4U62_15440 SM00874 tRNA synthetase B5 domain B4U62_15440 SM00896 Ferredoxin-fold anticodon binding domain B4U62_15455 SM00967 RNA 2'-O ribose methyltransferase substrate binding B4U62_15490 SM00813 Alpha-L-arabinofuranosidase C-terminus B4U62_15520 SM01007 Class II Aldolase and Adducin N-terminal domain B4U62_15585 SM00448 cheY-homologous receiver domain B4U62_15585 SM00850 LytTr DNA-binding domain B4U62_15590 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. B4U62_15590 SM00387 Histidine kinase-like ATPases B4U62_15600 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain B4U62_15615 SM00382 ATPases associated with a variety of cellular activities B4U62_15635 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain B4U62_15665 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain B4U62_15665 SM01232 B4U62_15665 B4U62_15670 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs B4U62_15670 SM00474 3'-5' exonuclease B4U62_15670 SM00475 5'-3' exonuclease B4U62_15670 SM00482 DNA polymerase A domain B4U62_15675 SM00091 PAS domain B4U62_15675 SM00387 Histidine kinase-like ATPases B4U62_15675 SM00388 His Kinase A (phosphoacceptor) domain B4U62_15680 SM00448 cheY-homologous receiver domain B4U62_15680 SM00862 Transcriptional regulatory protein, C terminal B4U62_15690 SM01329 B4U62_15690 B4U62_15735 SM00919 Malic enzyme, NAD binding domain B4U62_15735 SM01274 B4U62_15735 B4U62_15740 SM00481 DNA polymerase alpha chain like domain B4U62_15770 SM00116 Domain in cystathionine beta-synthase and other proteins. B4U62_15785 SM00904 Riboflavin kinase B4U62_15805 SM00382 ATPases associated with a variety of cellular activities B4U62_15820 SM00062 Bacterial periplasmic substrate-binding proteins B4U62_15825 SM00062 Bacterial periplasmic substrate-binding proteins B4U62_15840 SM00849 Metallo-beta-lactamase superfamily B4U62_15865 SM00852 Probable molybdopterin binding domain B4U62_15930 SM00981 B4U62_15930 B4U62_15960 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. B4U62_15965 SM00267 diguanylate cyclase B4U62_15975 SM00363 S4 RNA-binding domain B4U62_15975 SM01390 B4U62_15975 B4U62_15980 SM00363 S4 RNA-binding domain B4U62_16000 SM00116 Domain in cystathionine beta-synthase and other proteins. B4U62_16020 SM00354 helix_turn _helix lactose operon repressor B4U62_16025 SM00830 Chorismate mutase type II B4U62_16050 SM00382 ATPases associated with a variety of cellular activities B4U62_16050 SM00843 B4U62_16050 B4U62_16085 SM00919 Malic enzyme, NAD binding domain B4U62_16085 SM01274 B4U62_16085 B4U62_16090 SM00849 Metallo-beta-lactamase superfamily B4U62_16110 SM00642 Alpha-amylase domain B4U62_16115 SM00046 Diacylglycerol kinase catalytic domain (presumed) B4U62_16150 SM00382 ATPases associated with a variety of cellular activities B4U62_16155 SM00420 helix_turn_helix, Deoxyribose operon repressor B4U62_16160 SM00363 S4 RNA-binding domain B4U62_16210 SM00342 helix_turn_helix, arabinose operon control protein B4U62_16235 SM00729 Elongator protein 3, MiaB family, Radical SAM B4U62_16235 SM00876 Biotin and Thiamin Synthesis associated domain B4U62_16265 SM00354 helix_turn _helix lactose operon repressor B4U62_16290 SM00450 Rhodanese Homology Domain B4U62_16305 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) B4U62_16305 SM00091 PAS domain B4U62_16325 SM00382 ATPases associated with a variety of cellular activities B4U62_16330 SM00387 Histidine kinase-like ATPases B4U62_16335 SM00448 cheY-homologous receiver domain B4U62_16335 SM00862 Transcriptional regulatory protein, C terminal B4U62_16345 SM00382 ATPases associated with a variety of cellular activities B4U62_16360 SM00382 ATPases associated with a variety of cellular activities B4U62_16365 SM00345 helix_turn_helix gluconate operon transcriptional repressor B4U62_16375 SM00729 Elongator protein 3, MiaB family, Radical SAM B4U62_16435 SM00382 ATPases associated with a variety of cellular activities B4U62_16475 SM01234 B4U62_16475 B4U62_16480 SM00947 Carbonic anhydrase B4U62_16515 SM00382 ATPases associated with a variety of cellular activities B4U62_16530 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain B4U62_16575 SM00984 UDP binding domain B4U62_16635 SM00642 Alpha-amylase domain B4U62_16770 SM00244 prohibitin homologues B4U62_16825 SM00047 Lysozyme subfamily 2 B4U62_16875 SM00420 helix_turn_helix, Deoxyribose operon repressor B4U62_16875 SM01134 B4U62_16875 B4U62_16880 SM01007 Class II Aldolase and Adducin N-terminal domain B4U62_16890 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). B4U62_16890 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain B4U62_16890 SM00319 Homologues of the ligand binding domain of Tar B4U62_16895 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). B4U62_16895 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain B4U62_16895 SM00319 Homologues of the ligand binding domain of Tar B4U62_16900 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). B4U62_16900 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain B4U62_16900 SM00319 Homologues of the ligand binding domain of Tar B4U62_16905 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). B4U62_16905 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain B4U62_16905 SM00319 Homologues of the ligand binding domain of Tar B4U62_16925 SM00642 Alpha-amylase domain B4U62_16930 SM01091 Transporter associated domain B4U62_16985 SM00316 Ribosomal protein S1-like RNA-binding domain B4U62_16995 SM00344 helix_turn_helix ASNC type B4U62_17015 SM00387 Histidine kinase-like ATPases B4U62_17015 SM00388 His Kinase A (phosphoacceptor) domain B4U62_17020 SM01298 B4U62_17020 B4U62_17025 SM00479 B4U62_17025 B4U62_17055 SM00091 PAS domain B4U62_17055 SM00387 Histidine kinase-like ATPases B4U62_17060 SM00448 cheY-homologous receiver domain B4U62_17070 SM00382 ATPases associated with a variety of cellular activities B4U62_17135 SM00421 helix_turn_helix, Lux Regulon B4U62_17135 SM00448 cheY-homologous receiver domain B4U62_17140 SM00387 Histidine kinase-like ATPases B4U62_17165 SM00052 Putative diguanylate phosphodiesterase B4U62_17210 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. B4U62_17255 SM01002 Alanine dehydrogenase/PNT, C-terminal domain B4U62_17255 SM01003 Alanine dehydrogenase/PNT, N-terminal domain B4U62_17265 SM00923 MbtH-like protein B4U62_17270 SM00823 Phosphopantetheine attachment site B4U62_17270 SM00824 Thioesterase B4U62_17355 SM01240 B4U62_17355 B4U62_17455 SM00729 Elongator protein 3, MiaB family, Radical SAM B4U62_17535 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain B4U62_17570 SM00382 ATPases associated with a variety of cellular activities B4U62_17575 SM00345 helix_turn_helix gluconate operon transcriptional repressor B4U62_17575 SM00866 B4U62_17575 B4U62_17605 SM00465 GIY-YIG type nucleases (URI domain) B4U62_17630 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor B4U62_17655 SM00382 ATPases associated with a variety of cellular activities B4U62_17685 SM00382 ATPases associated with a variety of cellular activities B4U62_17685 SM00930 B4U62_17685 B4U62_17700 SM00493 B4U62_17700 B4U62_17755 SM00347 helix_turn_helix multiple antibiotic resistance protein B4U62_17785 SM00382 ATPases associated with a variety of cellular activities B4U62_17815 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. B4U62_17820 SM00448 cheY-homologous receiver domain B4U62_17820 SM00862 Transcriptional regulatory protein, C terminal B4U62_17825 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain B4U62_17825 SM00387 Histidine kinase-like ATPases B4U62_17825 SM00388 His Kinase A (phosphoacceptor) domain B4U62_17865 SM00421 helix_turn_helix, Lux Regulon B4U62_17865 SM00448 cheY-homologous receiver domain B4U62_17870 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain B4U62_17870 SM00387 Histidine kinase-like ATPases B4U62_17905 SM00382 ATPases associated with a variety of cellular activities B4U62_17930 SM00387 Histidine kinase-like ATPases B4U62_17930 SM00388 His Kinase A (phosphoacceptor) domain B4U62_17935 SM00448 cheY-homologous receiver domain B4U62_17935 SM00862 Transcriptional regulatory protein, C terminal B4U62_17955 SM00835 Cupin B4U62_17970 SM00382 ATPases associated with a variety of cellular activities B4U62_17980 SM00382 ATPases associated with a variety of cellular activities B4U62_18155 SM00316 Ribosomal protein S1-like RNA-binding domain B4U62_18155 SM00357 Cold shock protein domain B4U62_18155 SM00955 B4U62_18155 B4U62_18175 SM00530 Helix-turn-helix XRE-family like proteins B4U62_18180 SM00530 Helix-turn-helix XRE-family like proteins B4U62_18185 SM00530 Helix-turn-helix XRE-family like proteins B4U62_18195 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). B4U62_18195 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain B4U62_18215 SM00116 Domain in cystathionine beta-synthase and other proteins. B4U62_18215 SM00382 ATPases associated with a variety of cellular activities B4U62_18230 SM00752 Horizontally Transferred TransMembrane Domain B4U62_18245 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor B4U62_18265 SM00116 Domain in cystathionine beta-synthase and other proteins. B4U62_18265 SM00382 ATPases associated with a variety of cellular activities B4U62_18300 SM01192 B4U62_18300 B4U62_18300 SM01193 B4U62_18300 B4U62_18320 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain B4U62_18335 SM00345 helix_turn_helix gluconate operon transcriptional repressor B4U62_18365 SM00636 B4U62_18365 B4U62_18385 SM00421 helix_turn_helix, Lux Regulon B4U62_18385 SM00448 cheY-homologous receiver domain B4U62_18400 SM00382 ATPases associated with a variety of cellular activities B4U62_18410 SM00331 Sigma factor PP2C-like phosphatases B4U62_18440 SM00354 helix_turn _helix lactose operon repressor B4U62_18445 SM00345 helix_turn_helix gluconate operon transcriptional repressor B4U62_18445 SM00895 B4U62_18445 B4U62_18540 SM00530 Helix-turn-helix XRE-family like proteins B4U62_18585 SM00640 Glycosyl hydrolases family 32 B4U62_18640 SM00642 Alpha-amylase domain B4U62_18670 SM00642 Alpha-amylase domain B4U62_18675 SM00354 helix_turn _helix lactose operon repressor B4U62_18695 SM00947 Carbonic anhydrase B4U62_18710 SM00382 ATPases associated with a variety of cellular activities B4U62_18715 SM00387 Histidine kinase-like ATPases B4U62_18720 SM00448 cheY-homologous receiver domain B4U62_18720 SM00862 Transcriptional regulatory protein, C terminal B4U62_18770 SM00028 Tetratricopeptide repeats B4U62_18775 SM00382 ATPases associated with a variety of cellular activities B4U62_18880 SM00345 helix_turn_helix gluconate operon transcriptional repressor B4U62_18880 SM00866 B4U62_18880 B4U62_18890 SM00347 helix_turn_helix multiple antibiotic resistance protein B4U62_18905 SM00347 helix_turn_helix multiple antibiotic resistance protein B4U62_18945 SM00382 ATPases associated with a variety of cellular activities B4U62_18950 SM00487 DEAD-like helicases superfamily B4U62_18950 SM00490 helicase superfamily c-terminal domain B4U62_18975 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. B4U62_18985 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. B4U62_18985 SM00245 tail specific protease B4U62_18995 SM00382 ATPases associated with a variety of cellular activities B4U62_19015 SM00957 SecA DEAD-like domain B4U62_19015 SM00958 SecA preprotein cross-linking domain B4U62_19105 SM00487 DEAD-like helicases superfamily B4U62_19105 SM00490 helicase superfamily c-terminal domain B4U62_19115 SM00421 helix_turn_helix, Lux Regulon B4U62_19115 SM00448 cheY-homologous receiver domain B4U62_19120 SM00387 Histidine kinase-like ATPases B4U62_19160 SM00984 UDP binding domain B4U62_19180 SM00646 B4U62_19180 B4U62_19245 SM00382 ATPases associated with a variety of cellular activities B4U62_19285 SM00047 Lysozyme subfamily 2 B4U62_19285 SM00287 Bacterial SH3 domain homologues B4U62_19335 SM00854 Bacterial capsule synthesis protein PGA_cap B4U62_19355 SM00354 helix_turn _helix lactose operon repressor B4U62_19370 SM00382 ATPases associated with a variety of cellular activities B4U62_19385 SM00287 Bacterial SH3 domain homologues B4U62_19440 SM00903 Flavin reductase like domain B4U62_19455 SM00344 helix_turn_helix ASNC type B4U62_19520 SM00984 UDP binding domain B4U62_19550 SM00487 DEAD-like helicases superfamily B4U62_19550 SM00490 helicase superfamily c-terminal domain B4U62_19565 SM00420 helix_turn_helix, Deoxyribose operon repressor B4U62_19565 SM01134 B4U62_19565 B4U62_19590 SM00387 Histidine kinase-like ATPases B4U62_19605 SM00028 Tetratricopeptide repeats B4U62_19635 SM00347 helix_turn_helix multiple antibiotic resistance protein B4U62_19645 SM00710 Parallel beta-helix repeats B4U62_19645 SM00722 Domain present in carbohydrate binding proteins and sugar hydrolses B4U62_19675 SM00938 Nitrogen regulatory protein P-II B4U62_19680 SM00014 Acid phosphatase homologues B4U62_19710 SM00155 Phospholipase D. Active site motifs. B4U62_19715 SM00422 helix_turn_helix, mercury resistance B4U62_19770 SM00028 Tetratricopeptide repeats B4U62_19780 SM00729 Elongator protein 3, MiaB family, Radical SAM B4U62_19795 SM00327 von Willebrand factor (vWF) type A domain B4U62_19805 SM00327 von Willebrand factor (vWF) type A domain B4U62_19840 SM00382 ATPases associated with a variety of cellular activities B4U62_19900 SM00226 Low molecular weight phosphatase family B4U62_19940 SM00937 B4U62_19940 B4U62_19960 SM00919 Malic enzyme, NAD binding domain B4U62_19960 SM01274 B4U62_19960 B4U62_19975 SM00357 Cold shock protein domain B4U62_19975 SM00382 ATPases associated with a variety of cellular activities B4U62_19975 SM00959 Rho termination factor, N-terminal domain B4U62_20000 SM00448 cheY-homologous receiver domain B4U62_20030 SM00155 Phospholipase D. Active site motifs. B4U62_20050 SM00382 ATPases associated with a variety of cellular activities B4U62_20055 SM00155 Phospholipase D. Active site motifs. B4U62_20080 SM00926 Molybdopterin oxidoreductase Fe4S4 domain B4U62_20095 SM00100 Cyclic nucleotide-monophosphate binding domain B4U62_20095 SM00419 helix_turn_helix, cAMP Regulatory protein B4U62_20105 SM00836 DALR anticodon binding domain B4U62_20105 SM01016 Arginyl tRNA synthetase N terminal dom B4U62_20125 SM00729 Elongator protein 3, MiaB family, Radical SAM B4U62_20175 SM00028 Tetratricopeptide repeats B4U62_20225 SM00347 helix_turn_helix multiple antibiotic resistance protein B4U62_20230 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain B4U62_20250 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. B4U62_20345 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase B4U62_20385 SM00858 B4U62_20385 B4U62_20440 SM00986 Uracil DNA glycosylase superfamily B4U62_20440 SM00987 UreE urease accessory protein, C-terminal domain B4U62_20475 SM00640 Glycosyl hydrolases family 32 B4U62_20490 SM01061 CAT RNA binding domain B4U62_20640 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase B4U62_20670 SM01061 CAT RNA binding domain B4U62_20685 SM00347 helix_turn_helix multiple antibiotic resistance protein B4U62_20690 SM00363 S4 RNA-binding domain B4U62_20700 SM00954 Region found in RelA / SpoT proteins B4U62_20785 SM01060 B4U62_20785 B4U62_20800 SM00382 ATPases associated with a variety of cellular activities B4U62_20835 SM00382 ATPases associated with a variety of cellular activities B4U62_20840 SM00382 ATPases associated with a variety of cellular activities B4U62_20875 SM00382 ATPases associated with a variety of cellular activities B4U62_20925 SM00421 helix_turn_helix, Lux Regulon B4U62_20925 SM00448 cheY-homologous receiver domain B4U62_20955 SM00822 B4U62_20955 B4U62_20960 SM00882 Coenzyme A transferase B4U62_20965 SM00882 Coenzyme A transferase B4U62_20995 SM01060 B4U62_20995 B4U62_21010 SM01061 CAT RNA binding domain B4U62_21025 SM00487 DEAD-like helicases superfamily B4U62_21025 SM00490 helicase superfamily c-terminal domain B4U62_21120 SM00860 SMI1 / KNR4 family B4U62_21180 SM00941 Pyrimidine nucleoside phosphorylase C-terminal domain B4U62_21190 SM01133 B4U62_21190 B4U62_21220 SM00382 ATPases associated with a variety of cellular activities B4U62_21230 SM00062 Bacterial periplasmic substrate-binding proteins B4U62_21300 SM00382 ATPases associated with a variety of cellular activities B4U62_21305 SM00387 Histidine kinase-like ATPases B4U62_21310 SM00448 cheY-homologous receiver domain B4U62_21310 SM00862 Transcriptional regulatory protein, C terminal B4U62_21365 SM00420 helix_turn_helix, Deoxyribose operon repressor B4U62_21365 SM01134 B4U62_21365 B4U62_21390 SM00387 Histidine kinase-like ATPases B4U62_21420 SM00558 A domain family that is part of the cupin metalloenzyme superfamily. B4U62_21450 SM00564 beta-propeller repeat B4U62_21485 SM00347 helix_turn_helix multiple antibiotic resistance protein B4U62_21510 SM00345 helix_turn_helix gluconate operon transcriptional repressor B4U62_21510 SM00895 B4U62_21510 B4U62_21525 SM01350 B4U62_21525 B4U62_21555 SM00345 helix_turn_helix gluconate operon transcriptional repressor B4U62_21555 SM00866 B4U62_21555 B4U62_21570 SM00382 ATPases associated with a variety of cellular activities B4U62_21680 SM00091 PAS domain B4U62_21680 SM00382 ATPases associated with a variety of cellular activities B4U62_21695 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. B4U62_21700 SM00849 Metallo-beta-lactamase superfamily B4U62_21715 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) B4U62_21715 SM00091 PAS domain B4U62_21715 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain B4U62_21715 SM00387 Histidine kinase-like ATPases B4U62_21715 SM00388 His Kinase A (phosphoacceptor) domain B4U62_21720 SM00448 cheY-homologous receiver domain B4U62_21720 SM00862 Transcriptional regulatory protein, C terminal B4U62_21745 SM00788 Adenylosuccinate synthetase B4U62_21755 SM00382 ATPases associated with a variety of cellular activities B4U62_21790 SM00267 diguanylate cyclase B4U62_21815 SM01131 B4U62_21815 B4U62_21870 SM00382 ATPases associated with a variety of cellular activities B4U62_21910 SM00849 Metallo-beta-lactamase superfamily B4U62_21915 SM00347 helix_turn_helix multiple antibiotic resistance protein B4U62_21960 SM00422 helix_turn_helix, mercury resistance B4U62_21985 SM01266 B4U62_21985 B4U62_21995 SM00354 helix_turn _helix lactose operon repressor B4U62_22025 SM00926 Molybdopterin oxidoreductase Fe4S4 domain B4U62_22045 SM00470 ParB-like nuclease domain B4U62_22060 SM00470 ParB-like nuclease domain B4U62_22070 SM01228 B4U62_22070 B4U62_22080 SM00322 K homology RNA-binding domain B4U62_22080 SM00393 Putative single-stranded nucleic acids-binding domain B4U62_22080 SM01245 B4U62_22080 B4U62_22130 SM00257 Lysin motif B4U62_22250 SM00507 HNH nucleases B4U62_22265 SM00028 Tetratricopeptide repeats B4U62_22285 SM00257 Lysin motif B4U62_22450 SM00974 B4U62_22450 B4U62_22480 SM00481 DNA polymerase alpha chain like domain B4U62_22500 SM00072 Guanylate kinase homologues. B4U62_22545 SM00433 TopoisomeraseII B4U62_22550 SM00434 DNA Topoisomerase IV B4U62_22570 SM00959 Rho termination factor, N-terminal domain