locus-tag class description GII85_00005 PF08299 Bacterial dnaA protein helix-turn-helix GII85_00005 PF11638 DnaA N-terminal domain GII85_00005 PF00308 Bacterial dnaA protein GII85_00010 PF00712 DNA polymerase III beta subunit, N-terminal domain GII85_00010 PF02767 DNA polymerase III beta subunit, central domain GII85_00010 PF02768 DNA polymerase III beta subunit, C-terminal domain GII85_00020 PF02463 RecF/RecN/SMC N terminal domain GII85_00025 PF04025 Domain of unknown function (DUF370) GII85_00030 PF00204 DNA gyrase B GII85_00030 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GII85_00030 PF01751 Toprim domain GII85_00030 PF00986 DNA gyrase B subunit, carboxyl terminus GII85_00035 PF00521 DNA gyrase/topoisomerase IV, subunit A GII85_00035 PF03989 DNA gyrase C-terminal domain, beta-propeller GII85_00065 PF14175 YaaC-like Protein GII85_00070 PF00478 IMP dehydrogenase / GMP reductase domain GII85_00070 PF00571 CBS domain GII85_00075 PF00768 D-alanyl-D-alanine carboxypeptidase GII85_00075 PF07943 Penicillin-binding protein 5, C-terminal domain GII85_00080 PF01680 SOR/SNZ family GII85_00085 PF01174 SNO glutamine amidotransferase family GII85_00090 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) GII85_00090 PF02403 Seryl-tRNA synthetase N-terminal domain GII85_00100 PF01712 Deoxynucleoside kinase GII85_00105 PF01712 Deoxynucleoside kinase GII85_00110 PF01476 LysM domain GII85_00110 PF00704 Glycosyl hydrolases family 18 GII85_00115 PF00857 Isochorismatase family GII85_00120 PF14437 MafB19-like deaminase GII85_00130 PF12169 DNA polymerase III subunits gamma and tau domain III GII85_00135 PF02575 YbaB/EbfC DNA-binding family GII85_00140 PF13662 Toprim domain GII85_00140 PF02132 RecR protein GII85_00145 PF10704 Protein of unknown function (DUF2508) GII85_00150 PF07441 SigmaK-factor processing regulatory protein BofA GII85_00180 PF10764 Inhibitor of sigma-G Gin GII85_00185 PF10112 5-bromo-4-chloroindolyl phosphate hydrolysis protein GII85_00190 PF05816 Toxic anion resistance protein (TelA) GII85_00195 PF01276 Orn/Lys/Arg decarboxylase, major domain GII85_00195 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain GII85_00200 PF02223 Thymidylate kinase GII85_00205 PF06153 Cyclic-di-AMP receptor GII85_00210 PF03885 Protein of unknown function (DUF327) GII85_00215 PF09115 DNA polymerase III, delta subunit, C terminal GII85_00220 PF04468 PSP1 C-terminal conserved region GII85_00225 PF06156 Initiation control protein YabA GII85_00230 PF05175 Methyltransferase small domain GII85_00235 PF01541 GIY-YIG catalytic domain GII85_00240 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases GII85_00245 PF18277 AbrB C-terminal domain GII85_00245 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin GII85_00250 PF01588 Putative tRNA binding domain GII85_00250 PF09334 tRNA synthetases class I (M) GII85_00250 PF08264 Anticodon-binding domain of tRNA GII85_00255 PF01026 TatD related DNase GII85_00260 PF07501 G5 domain GII85_00260 PF03990 G5-linked-Ubiquitin-like domain GII85_00260 PF06725 3D domain GII85_00265 PF13331 Domain of unknown function (DUF4093) GII85_00265 PF13662 Toprim domain GII85_00270 PF00398 Ribosomal RNA adenine dimethylase GII85_00275 PF05582 YabG peptidase U57 GII85_00280 PF06257 Biofilm formation stimulator VEG GII85_00285 PF00269 Small, acid-soluble spore proteins, alpha/beta type GII85_00290 PF00288 GHMP kinases N terminal domain GII85_00290 PF08544 GHMP kinases C terminal GII85_00295 PF00156 Phosphoribosyl transferase domain GII85_00295 PF09182 Bacterial purine repressor, N-terminal GII85_00300 PF01042 Endoribonuclease L-PSP GII85_00305 PF04026 SpoVG GII85_00310 PF00483 Nucleotidyl transferase GII85_00310 PF00132 Bacterial transferase hexapeptide (six repeats) GII85_00315 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase GII85_00315 PF14572 Phosphoribosyl synthetase-associated domain GII85_00320 PF14693 Ribosomal protein TL5, C-terminal domain GII85_00320 PF01386 Ribosomal L25p family GII85_00325 PF01195 Peptidyl-tRNA hydrolase GII85_00330 PF10955 Protein of unknown function (DUF2757) GII85_00335 PF00270 DEAD/DEAH box helicase GII85_00335 PF02559 CarD-like/TRCF domain GII85_00335 PF17757 UvrB interaction domain GII85_00335 PF03461 TRCF domain GII85_00335 PF00271 Helicase conserved C-terminal domain GII85_00340 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin GII85_00340 PF15714 Stage V sporulation protein T C-terminal, transcription factor GII85_00345 PF01943 Polysaccharide biosynthesis protein GII85_00345 PF14667 Polysaccharide biosynthesis C-terminal domain GII85_00350 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases GII85_00350 PF03819 MazG nucleotide pyrophosphohydrolase domain GII85_00355 PF01479 S4 domain GII85_00360 PF07873 YabP family GII85_00365 PF09578 Spore cortex protein YabQ (Spore_YabQ) GII85_00370 PF04977 Septum formation initiator GII85_00375 PF00575 S1 RNA binding domain GII85_00390 PF07228 Stage II sporulation protein E (SpoIIE) GII85_00395 PF00092 von Willebrand factor type A domain GII85_00400 PF00069 Protein kinase domain GII85_00405 PF11734 TilS substrate C-terminal domain GII85_00405 PF09179 TilS substrate binding domain GII85_00405 PF01171 PP-loop family GII85_00415 PF01434 Peptidase family M41 GII85_00415 PF17862 AAA+ lid domain GII85_00415 PF00004 ATPase family associated with various cellular activities (AAA) GII85_00415 PF06480 FtsH Extracellular GII85_00420 PF03309 Type III pantothenate kinase GII85_00425 PF01430 Hsp33 protein GII85_00430 PF13145 PPIC-type PPIASE domain GII85_00435 PF00291 Pyridoxal-phosphate dependent enzyme GII85_00440 PF04715 Anthranilate synthase component I, N terminal region GII85_00440 PF00425 chorismate binding enzyme GII85_00445 PF00117 Glutamine amidotransferase class-I GII85_00450 PF01063 Amino-transferase class IV GII85_00455 PF00809 Pterin binding enzyme GII85_00460 PF02152 Dihydroneopterin aldolase GII85_00465 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) GII85_00470 PF01381 Helix-turn-helix GII85_00475 PF01207 Dihydrouridine synthase (Dus) GII85_00480 PF00152 tRNA synthetases class II (D, K and N) GII85_00480 PF01336 OB-fold nucleic acid binding domain GII85_00560 PF17727 CtsR C-terminal dimerization domain GII85_00560 PF05848 CtsR N-terminal HTH domain GII85_00565 PF02151 UvrB/uvrC motif GII85_00570 PF00217 ATP:guanido phosphotransferase, C-terminal catalytic domain GII85_00575 PF17871 AAA lid domain GII85_00575 PF02861 Clp amino terminal domain, pathogenicity island component GII85_00575 PF10431 C-terminal, D2-small domain, of ClpB protein GII85_00575 PF07724 AAA domain (Cdc48 subfamily) GII85_00575 PF00004 ATPase family associated with various cellular activities (AAA) GII85_00580 PF18073 Rubredoxin metal binding domain GII85_00585 PF02457 DisA bacterial checkpoint controller nucleotide-binding GII85_00585 PF10635 DisA bacterial checkpoint controller linker region GII85_00595 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase GII85_00600 PF02542 YgbB family GII85_00605 PF00749 tRNA synthetases class I (E and Q), catalytic domain GII85_00610 PF00132 Bacterial transferase hexapeptide (six repeats) GII85_00610 PF06426 Serine acetyltransferase, N-terminal GII85_00615 PF01406 tRNA synthetases class I (C) catalytic domain GII85_00615 PF09190 DALR domain GII85_00620 PF00636 Ribonuclease III domain GII85_00625 PF00588 SpoU rRNA Methylase family GII85_00625 PF08032 RNA 2'-O ribose methyltransferase substrate binding GII85_00630 PF05991 YacP-like NYN domain GII85_00635 PF04542 Sigma-70 region 2 GII85_00635 PF08281 Sigma-70, region 4 GII85_00640 PF00471 Ribosomal protein L33 GII85_00645 PF00584 SecE/Sec61-gamma subunits of protein translocation complex GII85_00650 PF00467 KOW motif GII85_00650 PF02357 Transcription termination factor nusG GII85_00655 PF03946 Ribosomal protein L11, N-terminal domain GII85_00655 PF00298 Ribosomal protein L11, RNA binding domain GII85_00660 PF00687 Ribosomal protein L1p/L10e family GII85_00665 PF00466 Ribosomal protein L10 GII85_00670 PF00542 Ribosomal protein L7/L12 C-terminal domain GII85_00670 PF16320 Ribosomal protein L7/L12 dimerisation domain GII85_00675 PF05175 Methyltransferase small domain GII85_00680 PF04561 RNA polymerase Rpb2, domain 2 GII85_00680 PF00562 RNA polymerase Rpb2, domain 6 GII85_00680 PF04560 RNA polymerase Rpb2, domain 7 GII85_00680 PF10385 RNA polymerase beta subunit external 1 domain GII85_00680 PF04565 RNA polymerase Rpb2, domain 3 GII85_00680 PF04563 RNA polymerase beta subunit GII85_00685 PF04998 RNA polymerase Rpb1, domain 5 GII85_00685 PF05000 RNA polymerase Rpb1, domain 4 GII85_00685 PF04983 RNA polymerase Rpb1, domain 3 GII85_00685 PF00623 RNA polymerase Rpb1, domain 2 GII85_00685 PF04997 RNA polymerase Rpb1, domain 1 GII85_00690 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family GII85_00695 PF00164 Ribosomal protein S12/S23 GII85_00700 PF00177 Ribosomal protein S7p/S5e GII85_00705 PF14492 Elongation Factor G, domain II GII85_00705 PF03144 Elongation factor Tu domain 2 GII85_00705 PF00679 Elongation factor G C-terminus GII85_00705 PF00009 Elongation factor Tu GTP binding domain GII85_00705 PF03764 Elongation factor G, domain IV GII85_00710 PF00009 Elongation factor Tu GTP binding domain GII85_00710 PF03144 Elongation factor Tu domain 2 GII85_00710 PF03143 Elongation factor Tu C-terminal domain GII85_00715 PF12146 Serine aminopeptidase, S33 GII85_00720 PF00338 Ribosomal protein S10p/S20e GII85_00725 PF00297 Ribosomal protein L3 GII85_00730 PF00573 Ribosomal protein L4/L1 family GII85_00735 PF00276 Ribosomal protein L23 GII85_00740 PF00181 Ribosomal Proteins L2, RNA binding domain GII85_00740 PF03947 Ribosomal Proteins L2, C-terminal domain GII85_00745 PF00203 Ribosomal protein S19 GII85_00750 PF00237 Ribosomal protein L22p/L17e GII85_00755 PF07650 KH domain GII85_00755 PF00189 Ribosomal protein S3, C-terminal domain GII85_00760 PF00252 Ribosomal protein L16p/L10e GII85_00765 PF00831 Ribosomal L29 protein GII85_00770 PF00366 Ribosomal protein S17 GII85_00775 PF00238 Ribosomal protein L14p/L23e GII85_00780 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 GII85_00780 PF00467 KOW motif GII85_00785 PF00281 Ribosomal protein L5 GII85_00785 PF00673 ribosomal L5P family C-terminus GII85_00790 PF00253 Ribosomal protein S14p/S29e GII85_00795 PF00410 Ribosomal protein S8 GII85_00800 PF00347 Ribosomal protein L6 GII85_00805 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast GII85_00810 PF03719 Ribosomal protein S5, C-terminal domain GII85_00810 PF00333 Ribosomal protein S5, N-terminal domain GII85_00815 PF00327 Ribosomal protein L30p/L7e GII85_00820 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A GII85_00825 PF00344 SecY translocase GII85_00830 PF05191 Adenylate kinase, active site lid GII85_00835 PF00557 Metallopeptidase family M24 GII85_00845 PF01176 Translation initiation factor 1A / IF-1 GII85_00850 PF00444 Ribosomal protein L36 GII85_00855 PF00416 Ribosomal protein S13/S18 GII85_00860 PF00411 Ribosomal protein S11 GII85_00865 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain GII85_00865 PF01000 RNA polymerase Rpb3/RpoA insert domain GII85_00865 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain GII85_00870 PF01196 Ribosomal protein L17 GII85_00875 PF00005 ABC transporter GII85_00880 PF00005 ABC transporter GII85_00885 PF02361 Cobalt transport protein GII85_00890 PF01416 tRNA pseudouridine synthase GII85_00895 PF00572 Ribosomal protein L13 GII85_00900 PF00380 Ribosomal protein S9/S16 GII85_00905 PF08241 Methyltransferase domain GII85_00910 PF10730 Protein of unknown function (DUF2521) GII85_00915 PF01520 N-acetylmuramoyl-L-alanine amidase GII85_00920 PF10609 NUBPL iron-transfer P-loop NTPase GII85_00925 PF17898 Spore germination GerD central core domain GII85_00930 PF14089 KinB-signalling pathway activation in sporulation GII85_00935 PF01522 Polysaccharide deacetylase GII85_01020 PF01740 STAS domain GII85_01020 PF00916 Sulfate permease family GII85_01025 PF01758 Sodium Bile acid symporter family GII85_01030 PF00756 Putative esterase GII85_01035 PF01032 FecCD transport family GII85_01040 PF01032 FecCD transport family GII85_01045 PF01497 Periplasmic binding protein GII85_01050 PF01497 Periplasmic binding protein GII85_01050 PF12833 Helix-turn-helix domain GII85_01055 PF07075 Protein of unknown function (DUF1343) GII85_01060 PF00933 Glycosyl hydrolase family 3 N terminal domain GII85_01060 PF01915 Glycosyl hydrolase family 3 C-terminal domain GII85_01065 PF00144 Beta-lactamase GII85_01070 PF02378 Phosphotransferase system, EIIC GII85_01070 PF00367 phosphotransferase system, EIIB GII85_01075 PF01418 Helix-turn-helix domain, rpiR family GII85_01075 PF01380 SIS domain GII85_01080 PF01380 SIS domain GII85_01090 PF04463 Protein of unknown function (DUF523) GII85_01120 PF08281 Sigma-70, region 4 GII85_01120 PF04542 Sigma-70 region 2 GII85_01125 PF13490 Putative zinc-finger GII85_01130 PF02457 DisA bacterial checkpoint controller nucleotide-binding GII85_01135 PF07949 YbbR-like protein GII85_01140 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I GII85_01140 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II GII85_01140 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III GII85_01140 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain GII85_01150 PF01380 SIS domain GII85_01160 PF00730 HhH-GPD superfamily base excision DNA repair protein GII85_01160 PF07934 8-oxoguanine DNA glycosylase, N-terminal domain GII85_01165 PF12833 Helix-turn-helix domain GII85_01165 PF02805 Metal binding domain of Ada GII85_01170 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain GII85_01170 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain GII85_01175 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus GII85_01175 PF00361 Proton-conducting membrane transporter GII85_01180 PF10070 Uncharacterized protein conserved in bacteria (DUF2309) GII85_01195 PF10057 Uncharacterized conserved protein (DUF2294) GII85_01205 PF07690 Major Facilitator Superfamily GII85_01220 PF00069 Protein kinase domain GII85_01230 PF16226 Domain of unknown function (DUF4885) GII85_01235 PF00324 Amino acid permease GII85_01240 PF17334 Minor curli fiber component A GII85_01245 PF17340 Family of unknown function (DUF5370) GII85_01250 PF00905 Penicillin binding protein transpeptidase domain GII85_01255 PF00067 Cytochrome P450 GII85_01265 PF13520 Amino acid permease GII85_01270 PF03009 Glycerophosphoryl diester phosphodiesterase family GII85_01275 PF07690 Major Facilitator Superfamily GII85_01280 PF10852 Protein of unknown function (DUF2651) GII85_01285 PF01047 MarR family GII85_01285 PF00583 Acetyltransferase (GNAT) family GII85_01290 PF07690 Major Facilitator Superfamily GII85_01300 PF08924 Domain of unknown function (DUF1906) GII85_01300 PF01471 Putative peptidoglycan binding domain GII85_01305 PF00892 EamA-like transporter family GII85_01310 PF02311 AraC-like ligand binding domain GII85_01310 PF12833 Helix-turn-helix domain GII85_01315 PF03747 ADP-ribosylglycohydrolase GII85_01320 PF04740 LXG domain of WXG superfamily GII85_01320 PF14411 A nuclease of the HNH/ENDO VII superfamily with conserved LHH GII85_01325 PF02222 ATP-grasp domain GII85_01330 PF00089 Trypsin GII85_01335 PF10794 Protein of unknown function (DUF2606) GII85_01340 PF12697 Alpha/beta hydrolase family GII85_01345 PF01066 CDP-alcohol phosphatidyltransferase GII85_01350 PF09335 SNARE associated Golgi protein GII85_01355 PF02666 Phosphatidylserine decarboxylase GII85_01365 PF05139 Erythromycin esterase GII85_01375 PF00375 Sodium:dicarboxylate symporter family GII85_01380 PF00367 phosphotransferase system, EIIB GII85_01380 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 GII85_01380 PF02378 Phosphotransferase system, EIIC GII85_01385 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase GII85_01400 PF01063 Amino-transferase class IV GII85_01405 PF00324 Amino acid permease GII85_01410 PF02574 Homocysteine S-methyltransferase GII85_01420 PF01235 Sodium:alanine symporter family GII85_01425 PF04960 Glutaminase GII85_01430 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GII85_01435 PF00072 Response regulator receiver domain GII85_01435 PF08664 YcbB domain GII85_01440 PF00701 Dihydrodipicolinate synthetase family GII85_01445 PF00171 Aldehyde dehydrogenase family GII85_01450 PF07690 Major Facilitator Superfamily GII85_01455 PF13378 Enolase C-terminal domain-like GII85_01460 PF00392 Bacterial regulatory proteins, gntR family GII85_01460 PF07729 FCD domain GII85_01465 PF08666 SAF domain GII85_01465 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus GII85_01470 PF01636 Phosphotransferase enzyme family GII85_01475 PF15777 Tryptophan RNA-binding attenuator protein inhibitory protein GII85_01480 PF00892 EamA-like transporter family GII85_01485 PF00486 Transcriptional regulatory protein, C terminal GII85_01485 PF00072 Response regulator receiver domain GII85_01490 PF00512 His Kinase A (phospho-acceptor) domain GII85_01490 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GII85_01495 PF00005 ABC transporter GII85_01510 PF10710 Protein of unknown function (DUF2512) GII85_01515 PF07486 Cell Wall Hydrolase GII85_01520 PF10138 vWA found in TerF C terminus GII85_01530 PF16655 PhoD-like phosphatase, N-terminal domain GII85_01530 PF09423 PhoD-like phosphatase GII85_01535 PF02416 mttA/Hcf106 family GII85_01540 PF00902 Sec-independent protein translocase protein (TatC) GII85_01545 PF01470 Pyroglutamyl peptidase GII85_01550 PF00266 Aminotransferase class-V GII85_01555 PF07690 Major Facilitator Superfamily GII85_01560 PF00440 Bacterial regulatory proteins, tetR family GII85_01565 PF00710 Asparaginase, N-terminal GII85_01565 PF17763 Glutaminase/Asparaginase C-terminal domain GII85_01570 PF01674 Lipase (class 2) GII85_01575 PF06271 RDD family GII85_01580 PF02810 SEC-C motif GII85_01580 PF05225 helix-turn-helix, Psq domain GII85_01585 PF14501 GHKL domain GII85_01590 PF04397 LytTr DNA-binding domain GII85_01590 PF00072 Response regulator receiver domain GII85_01595 PF00005 ABC transporter GII85_01600 PF12679 ABC-2 family transporter protein GII85_01605 PF00248 Aldo/keto reductase family GII85_01610 PF11611 Domain of unknown function (DUF4352) GII85_01610 PF17118 Domain of unknown function (DUF5105) GII85_01620 PF16244 Domain of unknown function (DUF4901) GII85_01625 PF16244 Domain of unknown function (DUF4901) GII85_01630 PF13539 D-alanyl-D-alanine carboxypeptidase GII85_01635 PF18801 response regulator aspartate phosphatase H, N terminal GII85_01645 PF00128 Alpha amylase, catalytic domain GII85_01650 PF01297 Zinc-uptake complex component A periplasmic GII85_01655 PF00005 ABC transporter GII85_01660 PF00950 ABC 3 transport family GII85_01665 PF00296 Luciferase-like monooxygenase GII85_01670 PF02342 TerD domain GII85_01675 PF02342 TerD domain GII85_01680 PF02342 TerD domain GII85_01685 PF03741 Integral membrane protein TerC family GII85_01690 PF14266 Putative component of 'biosynthetic module' GII85_01695 PF05816 Toxic anion resistance protein (TelA) GII85_01700 PF07690 Major Facilitator Superfamily GII85_01705 PF07690 Major Facilitator Superfamily GII85_01715 PF00005 ABC transporter GII85_01715 PF00571 CBS domain GII85_01720 PF00528 Binding-protein-dependent transport system inner membrane component GII85_01725 PF04069 Substrate binding domain of ABC-type glycine betaine transport system GII85_01730 PF01546 Peptidase family M20/M25/M40 GII85_01730 PF07687 Peptidase dimerisation domain GII85_01735 PF03606 C4-dicarboxylate anaerobic carrier GII85_01745 PF00128 Alpha amylase, catalytic domain GII85_01745 PF16738 Starch-binding module 26 GII85_01750 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain GII85_01750 PF00056 lactate/malate dehydrogenase, NAD binding domain GII85_01755 PF02652 L-lactate permease GII85_01760 PF07690 Major Facilitator Superfamily GII85_01765 PF01047 MarR family GII85_01770 PF01810 LysE type translocator GII85_01775 PF08892 YqcI/YcgG family GII85_01780 PF00324 Amino acid permease GII85_01785 PF09347 Domain of unknown function (DUF1989) GII85_01790 PF02540 NAD synthase GII85_01800 PF01202 Shikimate kinase GII85_01805 PF08241 Methyltransferase domain GII85_01810 PF03466 LysR substrate binding domain GII85_01810 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GII85_01815 PF05448 Acetyl xylan esterase (AXE1) GII85_01820 PF10127 RNA repair pathway DNA polymerase beta family GII85_01825 PF01619 Proline dehydrogenase GII85_01830 PF00171 Aldehyde dehydrogenase family GII85_01835 PF00474 Sodium:solute symporter family GII85_01840 PF13556 PucR C-terminal helix-turn-helix domain GII85_01840 PF17853 GGDEF-like domain GII85_01845 PF09323 Domain of unknown function (DUF1980) GII85_01850 PF03773 Predicted permease GII85_01855 PF00561 alpha/beta hydrolase fold GII85_01860 PF07992 Pyridine nucleotide-disulphide oxidoreductase GII85_01865 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases GII85_01870 PF00355 Rieske [2Fe-2S] domain GII85_01875 PF04324 BFD-like [2Fe-2S] binding domain GII85_01875 PF01077 Nitrite and sulphite reductase 4Fe-4S domain GII85_01875 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain GII85_01875 PF07992 Pyridine nucleotide-disulphide oxidoreductase GII85_01875 PF18267 Rubredoxin NAD+ reductase C-terminal domain GII85_01880 PF01568 Molydopterin dinucleotide binding domain GII85_01880 PF04879 Molybdopterin oxidoreductase Fe4S4 domain GII85_01880 PF00384 Molybdopterin oxidoreductase GII85_01885 PF18267 Rubredoxin NAD+ reductase C-terminal domain GII85_01885 PF04324 BFD-like [2Fe-2S] binding domain GII85_01885 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain GII85_01885 PF07992 Pyridine nucleotide-disulphide oxidoreductase GII85_01890 PF07690 Major Facilitator Superfamily GII85_01895 PF02649 Type I GTP cyclohydrolase folE2 GII85_01900 PF03734 L,D-transpeptidase catalytic domain GII85_01910 PF02492 CobW/HypB/UreG, nucleotide-binding domain GII85_01910 PF07683 Cobalamin synthesis protein cobW C-terminal domain GII85_01915 PF00528 Binding-protein-dependent transport system inner membrane component GII85_01920 PF00497 Bacterial extracellular solute-binding proteins, family 3 GII85_01930 PF06271 RDD family GII85_01935 PF10925 Protein of unknown function (DUF2680) GII85_01940 PF00232 Glycosyl hydrolase family 1 GII85_01945 PF11033 Competence protein J (ComJ) GII85_01950 PF14040 Deoxyribonuclease NucA/NucB GII85_01955 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GII85_01955 PF17202 Single cache domain 3 GII85_01955 PF00672 HAMP domain GII85_01960 PF01380 SIS domain GII85_01965 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family GII85_01970 PF01638 HxlR-like helix-turn-helix GII85_01975 PF13193 AMP-binding enzyme C-terminal domain GII85_01975 PF00501 AMP-binding enzyme GII85_01975 PF00550 Phosphopantetheine attachment site GII85_01975 PF00668 Condensation domain GII85_01980 PF13193 AMP-binding enzyme C-terminal domain GII85_01980 PF00668 Condensation domain GII85_01980 PF00550 Phosphopantetheine attachment site GII85_01980 PF00501 AMP-binding enzyme GII85_01985 PF00668 Condensation domain GII85_01985 PF13193 AMP-binding enzyme C-terminal domain GII85_01985 PF00501 AMP-binding enzyme GII85_01985 PF00975 Thioesterase domain GII85_01985 PF00550 Phosphopantetheine attachment site GII85_01990 PF00975 Thioesterase domain GII85_01995 PF07690 Major Facilitator Superfamily GII85_02000 PF14317 YcxB-like protein GII85_02005 PF00892 EamA-like transporter family GII85_02010 PF00392 Bacterial regulatory proteins, gntR family GII85_02010 PF00155 Aminotransferase class I and II GII85_02015 PF01648 4'-phosphopantetheinyl transferase superfamily GII85_02025 PF00005 ABC transporter GII85_02030 PF00528 Binding-protein-dependent transport system inner membrane component GII85_02035 PF00497 Bacterial extracellular solute-binding proteins, family 3 GII85_02040 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GII85_02040 PF03466 LysR substrate binding domain GII85_02045 PF02441 Flavoprotein GII85_02050 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase GII85_02065 PF00561 alpha/beta hydrolase fold GII85_02070 PF00854 POT family GII85_02075 PF12708 Pectate lyase superfamily protein GII85_02075 PF13229 Right handed beta helix region GII85_02085 PF03323 Bacillus/Clostridium GerA spore germination protein GII85_02090 PF05504 Spore germination B3/ GerAC like, C-terminal GII85_02095 PF03845 Spore germination protein GII85_02100 PF00005 ABC transporter GII85_02105 PF12704 MacB-like periplasmic core domain GII85_02105 PF02687 FtsX-like permease family GII85_02110 PF00072 Response regulator receiver domain GII85_02110 PF00486 Transcriptional regulatory protein, C terminal GII85_02115 PF00512 His Kinase A (phospho-acceptor) domain GII85_02115 PF00672 HAMP domain GII85_02115 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GII85_02120 PF18801 response regulator aspartate phosphatase H, N terminal GII85_02125 PF11131 Rap-phr extracellular signalling GII85_02130 PF09680 Family of unknown function GII85_02135 PF09680 Family of unknown function GII85_02140 PF13840 ACT domain GII85_02140 PF00696 Amino acid kinase family GII85_02145 PF01032 FecCD transport family GII85_02150 PF01032 FecCD transport family GII85_02155 PF00005 ABC transporter GII85_02160 PF01497 Periplasmic binding protein GII85_02165 PF07690 Major Facilitator Superfamily GII85_02170 PF00440 Bacterial regulatory proteins, tetR family GII85_02175 PF00881 Nitroreductase family GII85_02180 PF03992 Antibiotic biosynthesis monooxygenase GII85_02185 PF01022 Bacterial regulatory protein, arsR family GII85_02190 PF00155 Aminotransferase class I and II GII85_02190 PF00392 Bacterial regulatory proteins, gntR family GII85_02195 PF00202 Aminotransferase class-III GII85_02200 PF00171 Aldehyde dehydrogenase family GII85_02205 PF06800 Sugar transport protein GII85_02215 PF07987 Domain of unkown function (DUF1775) GII85_02220 PF04234 CopC domain GII85_02220 PF05425 Copper resistance protein D GII85_02220 PF13115 YtkA-like GII85_02225 PF08220 DeoR-like helix-turn-helix domain GII85_02225 PF05573 NosL GII85_02235 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit GII85_02235 PF02378 Phosphotransferase system, EIIC GII85_02240 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 GII85_02245 PF01232 Mannitol dehydrogenase Rossmann domain GII85_02245 PF08125 Mannitol dehydrogenase C-terminal domain GII85_02250 PF00180 Isocitrate/isopropylmalate dehydrogenase GII85_02255 PF10502 Signal peptidase, peptidase S26 GII85_02260 PF01738 Dienelactone hydrolase family GII85_02265 PF07977 FabA-like domain GII85_02280 PF03746 LamB/YcsF family GII85_02285 PF01566 Natural resistance-associated macrophage protein GII85_02290 PF07286 Protein of unknown function (DUF1445) GII85_02295 PF02682 Carboxyltransferase domain, subdomain C and D GII85_02300 PF02626 Carboxyltransferase domain, subdomain A and B GII85_02305 PF09339 IclR helix-turn-helix domain GII85_02305 PF01614 Bacterial transcriptional regulator GII85_02310 PF13472 GDSL-like Lipase/Acylhydrolase family GII85_02315 PF13129 Protein of unknown function (DUF3953) GII85_02320 PF03992 Antibiotic biosynthesis monooxygenase GII85_02325 PF05223 NTF2-like N-terminal transpeptidase domain GII85_02325 PF03717 Penicillin-binding Protein dimerisation domain GII85_02325 PF00905 Penicillin binding protein transpeptidase domain GII85_02330 PF00248 Aldo/keto reductase family GII85_02335 PF08279 HTH domain GII85_02335 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit GII85_02335 PF00874 PRD domain GII85_02335 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 GII85_02335 PF05043 Mga helix-turn-helix domain GII85_02340 PF00501 AMP-binding enzyme GII85_02340 PF13193 AMP-binding enzyme C-terminal domain GII85_02345 PF13649 Methyltransferase domain GII85_02360 PF13302 Acetyltransferase (GNAT) domain GII85_02365 PF16242 Pyridoxamine 5'-phosphate oxidase like GII85_02370 PF10997 Alternate to MurJ GII85_02375 PF12823 Domain of unknown function (DUF3817) GII85_02380 PF01037 Lrp/AsnC ligand binding domain GII85_02385 PF01751 Toprim domain GII85_02385 PF01131 DNA topoisomerase GII85_02395 PF00990 Diguanylate cyclase, GGDEF domain GII85_02400 PF10096 Uncharacterized protein conserved in bacteria (DUF2334) GII85_02410 PF03170 Bacterial cellulose synthase subunit GII85_02415 PF13520 Amino acid permease GII85_02420 PF00293 NUDIX domain GII85_02425 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain GII85_02425 PF00205 Thiamine pyrophosphate enzyme, central domain GII85_02425 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain GII85_02440 PF01566 Natural resistance-associated macrophage protein GII85_02445 PF04226 Transglycosylase associated protein GII85_02450 PF09954 Uncharacterized protein conserved in bacteria (DUF2188) GII85_02455 PF12787 EcsC protein family GII85_02460 PF10685 Stress-induced bacterial acidophilic repeat motif GII85_02460 PF00477 Small hydrophilic plant seed protein GII85_02465 PF07883 Cupin domain GII85_02470 PF16291 Domain of unknown function (DUF4937 GII85_02475 PF05067 Manganese containing catalase GII85_02480 PF03480 Bacterial extracellular solute-binding protein, family 7 GII85_02485 PF17203 Single cache domain 3 GII85_02485 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain GII85_02485 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GII85_02490 PF00072 Response regulator receiver domain GII85_02490 PF08279 HTH domain GII85_02495 PF00375 Sodium:dicarboxylate symporter family GII85_02500 PF01594 AI-2E family transporter GII85_02505 PF00005 ABC transporter GII85_02520 PF02771 Acyl-CoA dehydrogenase, N-terminal domain GII85_02520 PF02770 Acyl-CoA dehydrogenase, middle domain GII85_02520 PF08028 Acyl-CoA dehydrogenase, C-terminal domain GII85_02525 PF13040 Fur-regulated basic protein B GII85_02535 PF01545 Cation efflux family GII85_02535 PF16916 Dimerisation domain of Zinc Transporter GII85_02540 PF00085 Thioredoxin GII85_02545 PF07478 D-ala D-ala ligase C-terminus GII85_02545 PF01820 D-ala D-ala ligase N-terminus GII85_02550 PF01225 Mur ligase family, catalytic domain GII85_02550 PF08245 Mur ligase middle domain GII85_02550 PF02875 Mur ligase family, glutamate ligase domain GII85_02555 PF00271 Helicase conserved C-terminal domain GII85_02555 PF00270 DEAD/DEAH box helicase GII85_02560 PF03703 Bacterial PH domain GII85_02565 PF03703 Bacterial PH domain GII85_02570 PF01694 Rhomboid family GII85_02575 PF01648 4'-phosphopantetheinyl transferase superfamily GII85_02585 PF00842 Alanine racemase, C-terminal domain GII85_02585 PF01168 Alanine racemase, N-terminal domain GII85_02590 PF01402 Ribbon-helix-helix protein, copG family GII85_02595 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system GII85_02600 PF08678 Rsbr N terminal GII85_02600 PF01740 STAS domain GII85_02605 PF01740 STAS domain GII85_02610 PF13581 Histidine kinase-like ATPase domain GII85_02615 PF08673 Phosphoserine phosphatase RsbU, N-terminal domain GII85_02615 PF07228 Stage II sporulation protein E (SpoIIE) GII85_02620 PF01740 STAS domain GII85_02625 PF13581 Histidine kinase-like ATPase domain GII85_02630 PF04539 Sigma-70 region 3 GII85_02630 PF04542 Sigma-70 region 2 GII85_02630 PF04545 Sigma-70, region 4 GII85_02635 PF07228 Stage II sporulation protein E (SpoIIE) GII85_02640 PF09371 Tex-like protein N-terminal domain GII85_02640 PF16921 Tex protein YqgF-like domain GII85_02640 PF17674 HHH domain GII85_02640 PF00575 S1 RNA binding domain GII85_02650 PF17283 SprT-like zinc ribbon domain GII85_02650 PF10263 SprT-like family GII85_02730 PF14411 A nuclease of the HNH/ENDO VII superfamily with conserved LHH GII85_02730 PF04740 LXG domain of WXG superfamily GII85_02740 PF01381 Helix-turn-helix GII85_02750 PF00487 Fatty acid desaturase GII85_02755 PF00313 'Cold-shock' DNA-binding domain GII85_02760 PF02559 CarD-like/TRCF domain GII85_02765 PF00892 EamA-like transporter family GII85_02770 PF12833 Helix-turn-helix domain GII85_02770 PF02311 AraC-like ligand binding domain GII85_02775 PF00892 EamA-like transporter family GII85_02780 PF06445 GyrI-like small molecule binding domain GII85_02780 PF12833 Helix-turn-helix domain GII85_02785 PF00392 Bacterial regulatory proteins, gntR family GII85_02785 PF00155 Aminotransferase class I and II GII85_02790 PF07690 Major Facilitator Superfamily GII85_02800 PF08818 Domain of unknown function (DU1801) GII85_02810 PF00381 PTS HPr component phosphorylation site GII85_02815 PF00440 Bacterial regulatory proteins, tetR family GII85_02820 PF00892 EamA-like transporter family GII85_02825 PF00155 Aminotransferase class I and II GII85_02825 PF00392 Bacterial regulatory proteins, gntR family GII85_02830 PF01575 MaoC like domain GII85_02835 PF06821 Serine hydrolase GII85_02840 PF01638 HxlR-like helix-turn-helix GII85_02845 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) GII85_02845 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 GII85_02850 PF01638 HxlR-like helix-turn-helix GII85_02855 PF02525 Flavodoxin-like fold GII85_02860 PF07690 Major Facilitator Superfamily GII85_02865 PF16859 Tetracyclin repressor-like, C-terminal domain GII85_02865 PF00440 Bacterial regulatory proteins, tetR family GII85_02870 PF01022 Bacterial regulatory protein, arsR family GII85_02875 PF02040 Arsenical pump membrane protein GII85_02885 PF12746 GNAT acetyltransferase GII85_02890 PF00892 EamA-like transporter family GII85_02895 PF00155 Aminotransferase class I and II GII85_02895 PF00392 Bacterial regulatory proteins, gntR family GII85_02900 PF01613 Flavin reductase like domain GII85_02910 PF02627 Carboxymuconolactone decarboxylase family GII85_02925 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GII85_02925 PF07730 Histidine kinase GII85_02930 PF00196 Bacterial regulatory proteins, luxR family GII85_02930 PF00072 Response regulator receiver domain GII85_02935 PF03176 MMPL family GII85_02940 PF12697 Alpha/beta hydrolase family GII85_02945 PF04474 Protein of unknown function (DUF554) GII85_02950 PF13411 MerR HTH family regulatory protein GII85_02950 PF06445 GyrI-like small molecule binding domain GII85_02955 PF16916 Dimerisation domain of Zinc Transporter GII85_02955 PF01545 Cation efflux family GII85_02960 PF00881 Nitroreductase family GII85_02965 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily GII85_02970 PF07681 DoxX GII85_02975 PF00085 Thioredoxin GII85_02980 PF10676 Spore germination protein gerPA/gerPF GII85_02985 PF10676 Spore germination protein gerPA/gerPF GII85_02990 PF04239 Protein of unknown function (DUF421) GII85_02995 PF04239 Protein of unknown function (DUF421) GII85_03000 PF00011 Hsp20/alpha crystallin family GII85_03005 PF10676 Spore germination protein gerPA/gerPF GII85_03010 PF10676 Spore germination protein gerPA/gerPF GII85_03015 PF00440 Bacterial regulatory proteins, tetR family GII85_03020 PF13564 DoxX-like family GII85_03025 PF00583 Acetyltransferase (GNAT) family GII85_03035 PF00324 Amino acid permease GII85_03040 PF05163 DinB family GII85_03045 PF01047 MarR family GII85_03050 PF03176 MMPL family GII85_03055 PF00881 Nitroreductase family GII85_03060 PF01047 MarR family GII85_03065 PF07690 Major Facilitator Superfamily GII85_03070 PF01925 Sulfite exporter TauE/SafE GII85_03075 PF07729 FCD domain GII85_03075 PF00392 Bacterial regulatory proteins, gntR family GII85_03080 PF00704 Glycosyl hydrolases family 18 GII85_03080 PF01476 LysM domain GII85_03085 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase GII85_03090 PF11611 Domain of unknown function (DUF4352) GII85_03090 PF08139 Prokaryotic membrane lipoprotein lipid attachment site GII85_03095 PF00245 Alkaline phosphatase GII85_03100 PF08818 Domain of unknown function (DU1801) GII85_03105 PF16302 Domain of unknown function (DUF4944) GII85_03110 PF00583 Acetyltransferase (GNAT) family GII85_03115 PF01966 HD domain GII85_03120 PF07563 Protein of unknown function (DUF1541) GII85_03125 PF07690 Major Facilitator Superfamily GII85_03130 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit GII85_03135 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit GII85_03140 PF02378 Phosphotransferase system, EIIC GII85_03145 PF00232 Glycosyl hydrolase family 1 GII85_03150 PF00392 Bacterial regulatory proteins, gntR family GII85_03150 PF07702 UTRA domain GII85_03155 PF00480 ROK family GII85_03160 PF01238 Phosphomannose isomerase type I GII85_03165 PF02156 Glycosyl hydrolase family 26 GII85_03210 PF02769 AIR synthase related protein, C-terminal domain GII85_03210 PF00586 AIR synthase related protein, N-terminal domain GII85_03215 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE GII85_03220 PF00814 Glycoprotease family GII85_03225 PF00583 Acetyltransferase (GNAT) family GII85_03230 PF00814 Glycoprotease family GII85_03235 PF16326 ABC transporter C-terminal domain GII85_03235 PF12848 ABC transporter GII85_03235 PF00005 ABC transporter GII85_03240 PF01967 MoaC family GII85_03245 PF02629 CoA binding domain GII85_03245 PF06971 Putative DNA-binding protein N-terminus GII85_03250 PF02416 mttA/Hcf106 family GII85_03255 PF00902 Sec-independent protein translocase protein (TatC) GII85_03260 PF14146 Domain of unknown function (DUF4305) GII85_03265 PF02517 CPBP intramembrane metalloprotease GII85_03270 PF00166 Chaperonin 10 Kd subunit GII85_03275 PF00118 TCP-1/cpn60 chaperonin family GII85_03290 PF13176 Tetratricopeptide repeat GII85_03290 PF00931 NB-ARC domain GII85_03295 PF08240 Alcohol dehydrogenase GroES-like domain GII85_03295 PF00107 Zinc-binding dehydrogenase GII85_03305 PF00294 pfkB family carbohydrate kinase GII85_03310 PF04012 PspA/IM30 family GII85_03315 PF08271 TFIIB zinc-binding GII85_03320 PF04536 TPM domain GII85_03325 PF13421 SPFH domain-Band 7 family GII85_03330 PF07885 Ion channel GII85_03335 PF00083 Sugar (and other) transporter GII85_03340 PF00107 Zinc-binding dehydrogenase GII85_03340 PF08240 Alcohol dehydrogenase GroES-like domain GII85_03345 PF03330 Lytic transglycolase GII85_03350 PF07676 WD40-like Beta Propeller Repeat GII85_03360 PF14169 Cold-inducible protein YdjO GII85_03365 PF12697 Alpha/beta hydrolase family GII85_03370 PF13170 Protein of unknown function (DUF4003) GII85_03375 PF00394 Multicopper oxidase GII85_03375 PF07731 Multicopper oxidase GII85_03375 PF07732 Multicopper oxidase GII85_03380 PF00324 Amino acid permease GII85_03390 PF01545 Cation efflux family GII85_03390 PF16916 Dimerisation domain of Zinc Transporter GII85_03395 PF17863 AAA lid domain GII85_03395 PF07726 ATPase family associated with various cellular activities (AAA) GII85_03400 PF01882 Protein of unknown function DUF58 GII85_03405 PF11992 Domain of unknown function (DUF3488) GII85_03405 PF01841 Transglutaminase-like superfamily GII85_03405 PF13559 Domain of unknown function (DUF4129) GII85_03410 PF00958 GMP synthase C terminal domain GII85_03410 PF00117 Glutamine amidotransferase class-I GII85_03410 PF02540 NAD synthase GII85_03415 PF04545 Sigma-70, region 4 GII85_03415 PF04542 Sigma-70 region 2 GII85_03425 PF00860 Permease family GII85_03435 PF13076 Fur-regulated basic protein A GII85_03440 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) GII85_03445 PF14044 NETI protein GII85_03450 PF00731 AIR carboxylase GII85_03455 PF02222 ATP-grasp domain GII85_03455 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain GII85_03460 PF10397 Adenylosuccinate lyase C-terminus GII85_03460 PF00206 Lyase GII85_03465 PF01259 SAICAR synthetase GII85_03470 PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase GII85_03480 PF02769 AIR synthase related protein, C-terminal domain GII85_03480 PF00586 AIR synthase related protein, N-terminal domain GII85_03480 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain GII85_03485 PF00156 Phosphoribosyl transferase domain GII85_03490 PF02769 AIR synthase related protein, C-terminal domain GII85_03490 PF00586 AIR synthase related protein, N-terminal domain GII85_03495 PF00551 Formyl transferase GII85_03500 PF02142 MGS-like domain GII85_03500 PF01808 AICARFT/IMPCHase bienzyme GII85_03505 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain GII85_03505 PF02844 Phosphoribosylglycinamide synthetase, N domain GII85_03505 PF02843 Phosphoribosylglycinamide synthetase, C domain GII85_03510 PF01037 Lrp/AsnC ligand binding domain GII85_03515 PF13520 Amino acid permease GII85_03520 PF11127 Protein of unknown function (DUF2892) GII85_03525 PF01979 Amidohydrolase family GII85_03525 PF13382 Adenine deaminase C-terminal domain GII85_03530 PF11258 Protein of unknown function (DUF3048) N-terminal domain GII85_03530 PF17479 Protein of unknown function (DUF3048) C-terminal domain GII85_03535 PF01371 Trp repressor protein GII85_03540 PF01645 Conserved region in glutamate synthase GII85_03545 PF01884 PcrB family GII85_03550 PF00580 UvrD/REP helicase N-terminal domain GII85_03550 PF13361 UvrD-like helicase C-terminal domain GII85_03555 PF01653 NAD-dependent DNA ligase adenylation domain GII85_03555 PF00533 BRCA1 C Terminus (BRCT) domain GII85_03555 PF03119 NAD-dependent DNA ligase C4 zinc finger domain GII85_03555 PF12826 Helix-hairpin-helix motif GII85_03555 PF03120 NAD-dependent DNA ligase OB-fold domain GII85_03560 PF07537 CamS sex pheromone cAM373 precursor GII85_03565 PF01636 Phosphotransferase enzyme family GII85_03570 PF02308 MgtC family GII85_03575 PF00474 Sodium:solute symporter family GII85_03580 PF02686 Glu-tRNAGln amidotransferase C subunit GII85_03585 PF01425 Amidase GII85_03590 PF02934 GatB/GatE catalytic domain GII85_03590 PF02637 GatB domain GII85_03595 PF00440 Bacterial regulatory proteins, tetR family GII85_03600 PF00873 AcrB/AcrD/AcrF family GII85_03605 PF00781 Diacylglycerol kinase catalytic domain GII85_03610 PF01938 TRAM domain GII85_03610 PF05958 tRNA (Uracil-5-)-methyltransferase GII85_03620 PF04634 Protein of unknown function, DUF600 GII85_03625 PF04740 LXG domain of WXG superfamily GII85_03635 PF18801 response regulator aspartate phosphatase H, N terminal GII85_03635 PF13176 Tetratricopeptide repeat GII85_03645 PF01709 Transcriptional regulator GII85_03655 PF00440 Bacterial regulatory proteins, tetR family GII85_03660 PF12680 SnoaL-like domain GII85_03665 PF01370 NAD dependent epimerase/dehydratase family GII85_03670 PF11007 Spore coat associated protein JA (CotJA) GII85_03675 PF12652 CotJB protein GII85_03680 PF05067 Manganese containing catalase GII85_03685 PF00583 Acetyltransferase (GNAT) family GII85_03690 PF14150 YesK-like protein GII85_03695 PF04854 Protein of unknown function, DUF624 GII85_03700 PF06580 Histidine kinase GII85_03700 PF00672 HAMP domain GII85_03700 PF02743 Cache domain GII85_03700 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GII85_03705 PF00072 Response regulator receiver domain GII85_03705 PF12833 Helix-turn-helix domain GII85_03710 PF13416 Bacterial extracellular solute-binding protein GII85_03715 PF00528 Binding-protein-dependent transport system inner membrane component GII85_03720 PF00528 Binding-protein-dependent transport system inner membrane component GII85_03725 PF07470 Glycosyl Hydrolase Family 88 GII85_03730 PF12833 Helix-turn-helix domain GII85_03735 PF13472 GDSL-like Lipase/Acylhydrolase family GII85_03740 PF09224 Domain of unknown function (DUF1961) GII85_03745 PF04854 Protein of unknown function, DUF624 GII85_03750 PF18370 Rhamnogalacturonan I lyases beta-sheet domain GII85_03755 PF18370 Rhamnogalacturonan I lyases beta-sheet domain GII85_03755 PF01839 FG-GAP repeat GII85_03760 PF00657 GDSL-like Lipase/Acylhydrolase GII85_03765 PF08533 Beta-galactosidase C-terminal domain GII85_03765 PF02449 Beta-galactosidase GII85_03765 PF08532 Beta-galactosidase trimerisation domain GII85_03775 PF01547 Bacterial extracellular solute-binding protein GII85_03780 PF00528 Binding-protein-dependent transport system inner membrane component GII85_03785 PF00528 Binding-protein-dependent transport system inner membrane component GII85_03790 PF02056 Family 4 glycosyl hydrolase GII85_03790 PF11975 Family 4 glycosyl hydrolase C-terminal domain GII85_03795 PF04239 Protein of unknown function (DUF421) GII85_03800 PF03992 Antibiotic biosynthesis monooxygenase GII85_03805 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily GII85_03815 PF01740 STAS domain GII85_03820 PF10055 Uncharacterized small protein (DUF2292) GII85_03825 PF01027 Inhibitor of apoptosis-promoting Bax1 GII85_03830 PF00892 EamA-like transporter family GII85_03835 PF01047 MarR family GII85_03840 PF01494 FAD binding domain GII85_03850 PF13039 Protein of unknown function (DUF3900) GII85_03850 PF13037 Domain of unknown function (DUF3898) GII85_03855 PF00175 Oxidoreductase NAD-binding domain GII85_03855 PF00067 Cytochrome P450 GII85_03855 PF00258 Flavodoxin GII85_03855 PF00667 FAD binding domain GII85_03860 PF00884 Sulfatase GII85_03865 PF00483 Nucleotidyl transferase GII85_03870 PF16363 GDP-mannose 4,6 dehydratase GII85_03875 PF03407 Nucleotide-diphospho-sugar transferase GII85_03880 PF00535 Glycosyl transferase family 2 GII85_03885 PF03407 Nucleotide-diphospho-sugar transferase GII85_03890 PF07690 Major Facilitator Superfamily GII85_03895 PF13419 Haloacid dehalogenase-like hydrolase GII85_03900 PF13520 Amino acid permease GII85_03905 PF00171 Aldehyde dehydrogenase family GII85_03910 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GII85_03915 PF16326 ABC transporter C-terminal domain GII85_03915 PF00005 ABC transporter GII85_03915 PF12848 ABC transporter GII85_03920 PF10787 Uncharacterised protein from bacillus cereus group GII85_03925 PF13411 MerR HTH family regulatory protein GII85_03930 PF07690 Major Facilitator Superfamily GII85_03935 PF00082 Subtilase family GII85_03955 PF00005 ABC transporter GII85_03955 PF12848 ABC transporter GII85_03960 PF00270 DEAD/DEAH box helicase GII85_03960 PF00271 Helicase conserved C-terminal domain GII85_03965 PF00583 Acetyltransferase (GNAT) family GII85_03970 PF00107 Zinc-binding dehydrogenase GII85_03970 PF16884 N-terminal domain of oxidoreductase GII85_03975 PF00005 ABC transporter GII85_03980 PF01032 FecCD transport family GII85_03985 PF01032 FecCD transport family GII85_03990 PF01497 Periplasmic binding protein GII85_03995 PF11486 Protein of unknown function (DUF3212) GII85_04000 PF11181 Heat induced stress protein YflT GII85_04005 PF00544 Pectate lyase GII85_04010 PF00939 Sodium:sulfate symporter transmembrane region GII85_04015 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain GII85_04015 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GII85_04020 PF00072 Response regulator receiver domain GII85_04020 PF12431 Transcriptional regulator GII85_04020 PF08279 HTH domain GII85_04025 PF03401 Tripartite tricarboxylate transporter family receptor GII85_04030 PF03600 Citrate transporter GII85_04035 PF00753 Metallo-beta-lactamase superfamily GII85_04040 PF02898 Nitric oxide synthase, oxygenase domain GII85_04045 PF00708 Acylphosphatase GII85_04050 PF03475 3-alpha domain GII85_04050 PF03473 MOSC domain GII85_04055 PF11121 Protein of unknown function (DUF2639) GII85_04065 PF11588 Protein of unknown function (DUF3243) GII85_04070 PF00557 Metallopeptidase family M24 GII85_04075 PF00367 phosphotransferase system, EIIB GII85_04075 PF02378 Phosphotransferase system, EIIC GII85_04080 PF00884 Sulfatase GII85_04090 PF09350 Domain of unknown function (DUF1992) GII85_04100 PF03845 Spore germination protein GII85_04110 PF05504 Spore germination B3/ GerAC like, C-terminal GII85_04115 PF03323 Bacillus/Clostridium GerA spore germination protein GII85_04120 PF02378 Phosphotransferase system, EIIC GII85_04120 PF00367 phosphotransferase system, EIIB GII85_04125 PF16657 Maltogenic Amylase, C-terminal domain GII85_04125 PF00128 Alpha amylase, catalytic domain GII85_04130 PF07702 UTRA domain GII85_04130 PF00392 Bacterial regulatory proteins, gntR family GII85_04135 PF00881 Nitroreductase family GII85_04140 PF00149 Calcineurin-like phosphoesterase GII85_04140 PF02872 5'-nucleotidase, C-terminal domain GII85_04145 PF01965 DJ-1/PfpI family GII85_04150 PF07690 Major Facilitator Superfamily GII85_04155 PF06569 Protein of unknown function (DUF1128) GII85_04160 PF01451 Low molecular weight phosphotyrosine protein phosphatase GII85_04170 PF03631 Virulence factor BrkB GII85_04175 PF07690 Major Facilitator Superfamily GII85_04180 PF01699 Sodium/calcium exchanger protein GII85_04185 PF14167 YfkD-like protein GII85_04190 PF00924 Mechanosensitive ion channel GII85_04195 PF08756 YfkB-like domain GII85_04195 PF04055 Radical SAM superfamily GII85_04205 PF01522 Polysaccharide deacetylase GII85_04210 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase GII85_04210 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase GII85_04215 PF01544 CorA-like Mg2+ transporter protein GII85_04220 PF00730 HhH-GPD superfamily base excision DNA repair protein GII85_04225 PF01938 TRAM domain GII85_04225 PF05958 tRNA (Uracil-5-)-methyltransferase GII85_04230 PF14118 YfzA-like protein GII85_04235 PF01207 Dihydrouridine synthase (Dus) GII85_04250 PF00676 Dehydrogenase E1 component GII85_04255 PF02779 Transketolase, pyrimidine binding domain GII85_04255 PF02780 Transketolase, C-terminal domain GII85_04260 PF00364 Biotin-requiring enzyme GII85_04260 PF02817 e3 binding domain GII85_04260 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) GII85_04265 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GII85_04265 PF07992 Pyridine nucleotide-disulphide oxidoreductase GII85_04270 PF00158 Sigma-54 interaction domain GII85_04270 PF01590 GAF domain GII85_04270 PF02954 Bacterial regulatory protein, Fis family GII85_04275 PF08141 Small acid-soluble spore protein H family GII85_04280 PF02694 Uncharacterised BCR, YnfA/UPF0060 family GII85_04285 PF17353 Family of unknown function (DUF5381) GII85_04290 PF17353 Family of unknown function (DUF5381) GII85_04305 PF06013 Proteins of 100 residues with WXG GII85_04310 PF02056 Family 4 glycosyl hydrolase GII85_04310 PF11975 Family 4 glycosyl hydrolase C-terminal domain GII85_04315 PF01380 SIS domain GII85_04315 PF01418 Helix-turn-helix domain, rpiR family GII85_04320 PF00367 phosphotransferase system, EIIB GII85_04320 PF02378 Phosphotransferase system, EIIC GII85_04325 PF11962 Peptidase_G2, IMC autoproteolytic cleavage domain GII85_04325 PF12708 Pectate lyase superfamily protein GII85_04330 PF00005 ABC transporter GII85_04330 PF00664 ABC transporter transmembrane region GII85_04335 PF00005 ABC transporter GII85_04335 PF00664 ABC transporter transmembrane region GII85_04340 PF07681 DoxX GII85_04345 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily GII85_04350 PF02311 AraC-like ligand binding domain GII85_04350 PF12833 Helix-turn-helix domain GII85_04355 PF00083 Sugar (and other) transporter GII85_04360 PF01261 Xylose isomerase-like TIM barrel GII85_04365 PF02894 Oxidoreductase family, C-terminal alpha/beta domain GII85_04365 PF01408 Oxidoreductase family, NAD-binding Rossmann fold GII85_04370 PF07730 Histidine kinase GII85_04375 PF00196 Bacterial regulatory proteins, luxR family GII85_04375 PF00072 Response regulator receiver domain GII85_04380 PF00005 ABC transporter GII85_04395 PF03551 Transcriptional regulator PadR-like family GII85_04395 PF10400 Virulence activator alpha C-term GII85_04400 PF01674 Lipase (class 2) GII85_04405 PF01757 Acyltransferase family GII85_04410 PF17922 Tetracyclin repressor-like, C-terminal domain GII85_04410 PF00440 Bacterial regulatory proteins, tetR family GII85_04415 PF07690 Major Facilitator Superfamily GII85_04420 PF12867 DinB superfamily GII85_04425 PF07690 Major Facilitator Superfamily GII85_04430 PF01047 MarR family GII85_04435 PF03706 Lysylphosphatidylglycerol synthase TM region GII85_04435 PF09924 Uncharacterised conserved protein (DUF2156) GII85_04440 PF01497 Periplasmic binding protein GII85_04445 PF01032 FecCD transport family GII85_04450 PF01032 FecCD transport family GII85_04455 PF02567 Phenazine biosynthesis-like protein GII85_04460 PF00881 Nitroreductase family GII85_04465 PF14151 YfhD-like protein GII85_04470 PF14152 YfhE-like protein GII85_04475 PF08338 Domain of unknown function (DUF1731) GII85_04475 PF01370 NAD dependent epimerase/dehydratase family GII85_04480 PF02631 RecX family GII85_04485 PF08838 Protein of unknown function (DUF1811) GII85_04490 PF07690 Major Facilitator Superfamily GII85_04495 PF08176 Small acid-soluble spore protein K family GII85_04500 PF14043 WVELL protein GII85_04505 PF08239 Bacterial SH3 domain GII85_04510 PF13630 SdpI/YhfL protein family GII85_04515 PF00561 alpha/beta hydrolase fold GII85_04520 PF00535 Glycosyl transferase family 2 GII85_04525 PF09586 Bacterial membrane protein YfhO GII85_04530 PF04307 LexA-binding, inner membrane-associated putative hydrolase GII85_04535 PF14815 NUDIX domain GII85_04535 PF00730 HhH-GPD superfamily base excision DNA repair protein GII85_04550 PF04259 Small, acid-soluble spore protein, gamma-type GII85_04555 PF14182 YgaB-like protein GII85_04560 PF04167 Protein of unknown function (DUF402) GII85_04565 PF00005 ABC transporter GII85_04565 PF00664 ABC transporter transmembrane region GII85_04570 PF06081 Aromatic acid exporter family member 1 GII85_04575 PF00202 Aminotransferase class-III GII85_04580 PF00578 AhpC/TSA family GII85_04585 PF01475 Ferric uptake regulator family GII85_04590 PF11023 Zinc-ribbon containing domain GII85_04595 PF18576 Helix-turn-helix domain GII85_04595 PF14540 Nucleotidyltransferase-like GII85_04695 PF07070 SpoOM protein GII85_04705 PF07875 Coat F domain GII85_04715 PF01964 Radical SAM ThiC family GII85_04715 PF13667 ThiC-associated domain GII85_04725 PF13040 Fur-regulated basic protein B GII85_04730 PF00199 Catalase GII85_04730 PF06628 Catalase-related immune-responsive GII85_04735 PF00005 ABC transporter GII85_04740 PF09084 NMT1/THI5 like GII85_04745 PF00528 Binding-protein-dependent transport system inner membrane component GII85_04750 PF00296 Luciferase-like monooxygenase GII85_04760 PF00253 Ribosomal protein S14p/S29e GII85_04770 PF01381 Helix-turn-helix GII85_04785 PF08331 Domain of unknown function (DUF1730) GII85_04790 PF12671 Putative amidase domain GII85_04795 PF00588 SpoU rRNA Methylase family GII85_04800 PF13171 Protein of unknown function (DUF4004) GII85_04805 PF04519 Polymer-forming cytoskeletal GII85_04815 PF06798 PrkA serine protein kinase C-terminal domain GII85_04815 PF08298 PrkA AAA domain GII85_04820 PF04285 Protein of unknown function (DUF444) GII85_04825 PF01047 MarR family GII85_04835 PF07690 Major Facilitator Superfamily GII85_04840 PF03358 NADPH-dependent FMN reductase GII85_04860 PF00392 Bacterial regulatory proteins, gntR family GII85_04865 PF00005 ABC transporter GII85_04870 PF00005 ABC transporter GII85_04875 PF12679 ABC-2 family transporter protein GII85_04880 PF00313 'Cold-shock' DNA-binding domain GII85_04885 PF03180 NLPA lipoprotein GII85_04890 PF07694 5TMR of 5TMR-LYT GII85_04890 PF00990 Diguanylate cyclase, GGDEF domain GII85_04895 PF00375 Sodium:dicarboxylate symporter family GII85_04915 PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) GII85_04925 PF07875 Coat F domain GII85_04930 PF00149 Calcineurin-like phosphoesterase GII85_04930 PF00746 LPXTG cell wall anchor motif GII85_04930 PF00565 Staphylococcal nuclease homologue GII85_04930 PF02872 5'-nucleotidase, C-terminal domain GII85_04935 PF04203 Sortase domain GII85_04940 PF00849 RNA pseudouridylate synthase GII85_04940 PF01479 S4 domain GII85_04945 PF17326 Family of unknown function (DUF5365) GII85_04950 PF00571 CBS domain GII85_04955 PF13419 Haloacid dehalogenase-like hydrolase GII85_04960 PF00795 Carbon-nitrogen hydrolase GII85_04960 PF00583 Acetyltransferase (GNAT) family GII85_04965 PF00202 Aminotransferase class-III GII85_04970 PF04309 Glycerol-3-phosphate responsive antiterminator GII85_04975 PF00230 Major intrinsic protein GII85_04980 PF00370 FGGY family of carbohydrate kinases, N-terminal domain GII85_04980 PF02782 FGGY family of carbohydrate kinases, C-terminal domain GII85_04985 PF01266 FAD dependent oxidoreductase GII85_04985 PF16901 C-terminal domain of alpha-glycerophosphate oxidase GII85_04990 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III GII85_04990 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II GII85_04990 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain GII85_04990 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I GII85_04995 PF07730 Histidine kinase GII85_04995 PF13185 GAF domain GII85_05000 PF00072 Response regulator receiver domain GII85_05000 PF00196 Bacterial regulatory proteins, luxR family GII85_05005 PF03358 NADPH-dependent FMN reductase GII85_05010 PF14148 YhdB-like protein GII85_05015 PF13028 Protein of unknown function (DUF3889) GII85_05020 PF01476 LysM domain GII85_05020 PF00877 NlpC/P60 family GII85_05025 PF02082 Transcriptional regulator GII85_05030 PF05552 Conserved TM helix GII85_05035 PF04293 SpoVR like protein GII85_05040 PF00245 Alkaline phosphatase GII85_05045 PF00877 NlpC/P60 family GII85_05045 PF01476 LysM domain GII85_05050 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GII85_05050 PF03466 LysR substrate binding domain GII85_05055 PF00285 Citrate synthase, C-terminal domain GII85_05065 PF13520 Amino acid permease GII85_05070 PF00209 Sodium:neurotransmitter symporter family GII85_05075 PF00155 Aminotransferase class I and II GII85_05075 PF00392 Bacterial regulatory proteins, gntR family GII85_05080 PF00583 Acetyltransferase (GNAT) family GII85_05085 PF17453 Sigma-M inhibitor GII85_05090 PF13791 Sigma factor regulator C-terminal GII85_05090 PF13800 Sigma factor regulator N-terminal GII85_05095 PF04542 Sigma-70 region 2 GII85_05095 PF08281 Sigma-70, region 4 GII85_05100 PF00248 Aldo/keto reductase family GII85_05105 PF01553 Acyltransferase GII85_05110 PF03471 Transporter associated domain GII85_05110 PF00571 CBS domain GII85_05110 PF01595 Cyclin M transmembrane N-terminal domain GII85_05115 PF13411 MerR HTH family regulatory protein GII85_05120 PF00155 Aminotransferase class I and II GII85_05125 PF01595 Cyclin M transmembrane N-terminal domain GII85_05125 PF00571 CBS domain GII85_05125 PF03471 Transporter associated domain GII85_05130 PF02537 CrcB-like protein, Camphor Resistance (CrcB) GII85_05135 PF02537 CrcB-like protein, Camphor Resistance (CrcB) GII85_05140 PF03009 Glycerophosphoryl diester phosphodiesterase family GII85_05145 PF17444 Uncharacterized YhdX-like GII85_05150 PF00924 Mechanosensitive ion channel GII85_05155 PF02146 Sir2 family GII85_05160 PF01522 Polysaccharide deacetylase GII85_05165 PF01063 Amino-transferase class IV GII85_05170 PF03553 Na+/H+ antiporter family GII85_05175 PF00582 Universal stress protein family GII85_05185 PF00664 ABC transporter transmembrane region GII85_05185 PF00005 ABC transporter GII85_05190 PF00005 ABC transporter GII85_05190 PF00664 ABC transporter transmembrane region GII85_05195 PF13460 NAD(P)H-binding GII85_05205 PF00269 Small, acid-soluble spore proteins, alpha/beta type GII85_05210 PF17277 Family of unknown function (DUF5342) GII85_05215 PF14398 YheC/D like ATP-grasp GII85_05220 PF14398 YheC/D like ATP-grasp GII85_05225 PF04286 Protein of unknown function (DUF445) GII85_05230 PF06133 Control of competence regulator ComK, YlbF/YmcA GII85_05235 PF08713 DNA alkylation repair enzyme GII85_05245 PF04055 Radical SAM superfamily GII85_05250 PF00999 Sodium/hydrogen exchanger family GII85_05255 PF02080 TrkA-C domain GII85_05265 PF00378 Enoyl-CoA hydratase/isomerase GII85_05270 PF14120 YhzD-like protein GII85_05275 PF13732 Domain of unknown function (DUF4162) GII85_05275 PF00005 ABC transporter GII85_05285 PF00149 Calcineurin-like phosphoesterase GII85_05290 PF13514 AAA domain GII85_05295 PF01966 HD domain GII85_05300 PF14147 Sporulation protein YhaL GII85_05310 PF09680 Family of unknown function GII85_05315 PF09680 Family of unknown function GII85_05325 PF11667 Putative zincin peptidase GII85_05330 PF08963 Protein of unknown function (DUF1878) GII85_05335 PF01047 MarR family GII85_05340 PF12732 YtxH-like protein GII85_05350 PF17099 Tryptophan transporter TrpP GII85_05355 PF00266 Aminotransferase class-V GII85_05360 PF01230 HIT domain GII85_05365 PF00005 ABC transporter GII85_05370 PF05975 Bacterial ABC transporter protein EcsB GII85_05375 PF12787 EcsC protein family GII85_05380 PF07687 Peptidase dimerisation domain GII85_05380 PF01546 Peptidase family M20/M25/M40 GII85_05395 PF03992 Antibiotic biosynthesis monooxygenase GII85_05400 PF00912 Transglycosylase GII85_05400 PF00905 Penicillin binding protein transpeptidase domain GII85_05405 PF01208 Uroporphyrinogen decarboxylase (URO-D) GII85_05420 PF00440 Bacterial regulatory proteins, tetR family GII85_05420 PF17932 Tetracyclin repressor-like, C-terminal domain GII85_05430 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal GII85_05430 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III GII85_05435 PF10086 YhfC intramembrane metalloprotease GII85_05445 PF05343 M42 glutamyl aminopeptidase GII85_05450 PF04266 ASCH domain GII85_05455 PF00375 Sodium:dicarboxylate symporter family GII85_05460 PF14149 YhfH-like protein GII85_05465 PF12706 Beta-lactamase superfamily domain GII85_05470 PF03099 Biotin/lipoate A/B protein ligase family GII85_05470 PF10437 Bacterial lipoate protein ligase C-terminus GII85_05475 PF13460 NAD(P)H-binding GII85_05480 PF13193 AMP-binding enzyme C-terminal domain GII85_05480 PF00501 AMP-binding enzyme GII85_05490 PF16491 CAAX prenyl protease N-terminal, five membrane helices GII85_05490 PF01435 Peptidase family M48 GII85_05495 PF05922 Peptidase inhibitor I9 GII85_05495 PF00082 Subtilase family GII85_05500 PF00583 Acetyltransferase (GNAT) family GII85_05505 PF08240 Alcohol dehydrogenase GroES-like domain GII85_05505 PF00107 Zinc-binding dehydrogenase GII85_05510 PF01497 Periplasmic binding protein GII85_05515 PF00300 Histidine phosphatase superfamily (branch 1) GII85_05520 PF02803 Thiolase, C-terminal domain GII85_05520 PF00108 Thiolase, N-terminal domain GII85_05525 PF13193 AMP-binding enzyme C-terminal domain GII85_05525 PF00501 AMP-binding enzyme GII85_05530 PF02632 BioY family GII85_05535 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GII85_05540 PF01266 FAD dependent oxidoreductase GII85_05540 PF00355 Rieske [2Fe-2S] domain GII85_05550 PF08858 IDEAL domain GII85_05555 PF06338 ComK protein GII85_05565 PF05901 Excalibur calcium-binding domain GII85_05570 PF00474 Sodium:solute symporter family GII85_05575 PF11755 Protein of unknown function (DUF3311) GII85_05585 PF09335 SNARE associated Golgi protein GII85_05590 PF10502 Signal peptidase, peptidase S26 GII85_05595 PF01494 FAD binding domain GII85_05600 PF01047 MarR family GII85_05610 PF07690 Major Facilitator Superfamily GII85_05615 PF02894 Oxidoreductase family, C-terminal alpha/beta domain GII85_05615 PF01408 Oxidoreductase family, NAD-binding Rossmann fold GII85_05620 PF05116 Sucrose-6F-phosphate phosphohydrolase GII85_05625 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family GII85_05630 PF00356 Bacterial regulatory proteins, lacI family GII85_05635 PF05145 Transition state regulatory protein AbrB GII85_05640 PF07690 Major Facilitator Superfamily GII85_05645 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle GII85_05645 PF12793 Sugar transport-related sRNA regulator N-term GII85_05650 PF03860 Domain of Unknown Function (DUF326) GII85_05655 PF02915 Rubrerythrin GII85_05660 PF12705 PD-(D/E)XK nuclease superfamily GII85_05660 PF13361 UvrD-like helicase C-terminal domain GII85_05665 PF00580 UvrD/REP helicase N-terminal domain GII85_05665 PF13361 UvrD-like helicase C-terminal domain GII85_05665 PF12705 PD-(D/E)XK nuclease superfamily GII85_05670 PF00149 Calcineurin-like phosphoesterase GII85_05670 PF12320 Type 5 capsule protein repressor C-terminal domain GII85_05675 PF13476 AAA domain GII85_05685 PF10676 Spore germination protein gerPA/gerPF GII85_05690 PF10970 Spore germination protein GerPE GII85_05700 PF10737 Spore germination protein GerPC GII85_05705 PF10803 Spore germination GerPB GII85_05710 PF10676 Spore germination protein gerPA/gerPF GII85_05715 PF09388 Spo0E like sporulation regulatory protein GII85_05720 PF08757 CotH kinase protein GII85_05725 PF01557 Fumarylacetoacetate (FAA) hydrolase family GII85_05730 PF07457 Protein of unknown function (DUF1516) GII85_05735 PF00082 Subtilase family GII85_05735 PF17936 Bacterial Ig domain GII85_05740 PF10949 Protein of unknown function (DUF2777) GII85_05745 PF00733 Asparagine synthase GII85_05745 PF13537 Glutamine amidotransferase domain GII85_05750 PF05163 DinB family GII85_05760 PF01554 MatE GII85_05765 PF12833 Helix-turn-helix domain GII85_05765 PF02311 AraC-like ligand binding domain GII85_05770 PF00356 Bacterial regulatory proteins, lacI family GII85_05775 PF01408 Oxidoreductase family, NAD-binding Rossmann fold GII85_05775 PF02894 Oxidoreductase family, C-terminal alpha/beta domain GII85_05780 PF05163 DinB family GII85_05785 PF01810 LysE type translocator GII85_05790 PF00155 Aminotransferase class I and II GII85_05790 PF00392 Bacterial regulatory proteins, gntR family GII85_05795 PF13599 Pentapeptide repeats (9 copies) GII85_05800 PF08386 TAP-like protein GII85_05800 PF00561 alpha/beta hydrolase fold GII85_05810 PF14306 PUA-like domain GII85_05810 PF01747 ATP-sulfurylase GII85_05815 PF01507 Phosphoadenosine phosphosulfate reductase family GII85_05820 PF04029 2-phosphosulpholactate phosphatase GII85_05825 PF02679 (2R)-phospho-3-sulfolactate synthase (ComA) GII85_05830 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 GII85_05835 PF13378 Enolase C-terminal domain-like GII85_05835 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain GII85_05840 PF07690 Major Facilitator Superfamily GII85_05845 PF18014 Acetyltransferase (GNAT) domain GII85_05845 PF13673 Acetyltransferase (GNAT) domain GII85_05850 PF13673 Acetyltransferase (GNAT) domain GII85_05855 PF02574 Homocysteine S-methyltransferase GII85_05855 PF02219 Methylenetetrahydrofolate reductase GII85_05860 PF04461 Protein of unknown function (DUF520) GII85_05865 PF17783 CvfB-like winged helix domain GII85_05865 PF13509 S1 domain GII85_05880 PF17418 Sporulation delaying protein SdpA GII85_05885 PF03551 Transcriptional regulator PadR-like family GII85_05895 PF12650 Domain of unknown function (DUF3784) GII85_05900 PF03413 Peptidase propeptide and YPEB domain GII85_05900 PF01447 Thermolysin metallopeptidase, catalytic domain GII85_05900 PF07504 Fungalysin/Thermolysin Propeptide Motif GII85_05900 PF02868 Thermolysin metallopeptidase, alpha-helical domain GII85_05905 PF02645 Uncharacterised protein, DegV family COG1307 GII85_05910 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 GII85_05910 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) GII85_05915 PF12690 Intracellular proteinase inhibitor GII85_05920 PF12758 Protein of unknown function (DUF3813) GII85_05930 PF00326 Prolyl oligopeptidase family GII85_05935 PF01883 Iron-sulfur cluster assembly protein GII85_05945 PF01565 FAD binding domain GII85_05950 PF07690 Major Facilitator Superfamily GII85_05955 PF01118 Semialdehyde dehydrogenase, NAD binding domain GII85_05955 PF02774 Semialdehyde dehydrogenase, dimerisation domain GII85_05960 PF01960 ArgJ family GII85_05965 PF00696 Amino acid kinase family GII85_05970 PF00202 Aminotransferase class-III GII85_05975 PF00117 Glutamine amidotransferase class-I GII85_05975 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain GII85_05980 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain GII85_05980 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain GII85_05985 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain GII85_05985 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain GII85_05990 PF14168 YjzC-like protein GII85_05995 PF11151 Protein of unknown function (DUF2929) GII85_06010 PF02608 ABC transporter substrate-binding protein PnrA-like GII85_06015 PF10815 ComZ GII85_06025 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal GII85_06025 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III GII85_06030 PF02801 Beta-ketoacyl synthase, C-terminal domain GII85_06030 PF00109 Beta-ketoacyl synthase, N-terminal domain GII85_06035 PF10026 Predicted Zn-dependent protease (DUF2268) GII85_06040 PF08352 Oligopeptide/dipeptide transporter, C-terminal region GII85_06040 PF00005 ABC transporter GII85_06045 PF00005 ABC transporter GII85_06045 PF08352 Oligopeptide/dipeptide transporter, C-terminal region GII85_06050 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle GII85_06055 PF00528 Binding-protein-dependent transport system inner membrane component GII85_06060 PF00528 Binding-protein-dependent transport system inner membrane component GII85_06060 PF12911 N-terminal TM domain of oligopeptide transport permease C GII85_06065 PF12227 Protein of unknown function (DUF3603) GII85_06070 PF00579 tRNA synthetases class I (W and Y) GII85_06075 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle GII85_06080 PF00528 Binding-protein-dependent transport system inner membrane component GII85_06085 PF12911 N-terminal TM domain of oligopeptide transport permease C GII85_06085 PF00528 Binding-protein-dependent transport system inner membrane component GII85_06090 PF00005 ABC transporter GII85_06090 PF08352 Oligopeptide/dipeptide transporter, C-terminal region GII85_06095 PF08352 Oligopeptide/dipeptide transporter, C-terminal region GII85_06095 PF00005 ABC transporter GII85_06100 PF07690 Major Facilitator Superfamily GII85_06105 PF13508 Acetyltransferase (GNAT) domain GII85_06110 PF03960 ArsC family GII85_06115 PF03741 Integral membrane protein TerC family GII85_06125 PF05389 Negative regulator of genetic competence (MecA) GII85_06135 PF06054 Competence protein CoiA-like family GII85_06140 PF08439 Oligopeptidase F GII85_06140 PF01432 Peptidase family M3 GII85_06155 PF01152 Bacterial-like globin GII85_06160 PF01464 Transglycosylase SLT domain GII85_06165 PF01928 CYTH domain GII85_06175 PF04607 Region found in RelA / SpoT proteins GII85_06180 PF01513 ATP-NAD kinase GII85_06185 PF00849 RNA pseudouridylate synthase GII85_06190 PF00149 Calcineurin-like phosphoesterase GII85_06195 PF02254 TrkA-N domain GII85_06195 PF02080 TrkA-C domain GII85_06195 PF00999 Sodium/hydrogen exchanger family GII85_06200 PF03070 TENA/THI-4/PQQC family GII85_06205 PF02581 Thiamine monophosphate synthase GII85_06210 PF01266 FAD dependent oxidoreductase GII85_06215 PF02597 ThiS family GII85_06220 PF05690 Thiazole biosynthesis protein ThiG GII85_06225 PF00899 ThiF family GII85_06230 PF08543 Phosphomethylpyrimidine kinase GII85_06240 PF14153 Spore coat protein CotO GII85_06245 PF10612 Spore coat protein Z GII85_06250 PF10612 Spore coat protein Z GII85_06255 PF07552 Spore Coat Protein X and V domain GII85_06265 PF07552 Spore Coat Protein X and V domain GII85_06270 PF07098 Protein of unknown function (DUF1360) GII85_06285 PF14069 Stage VI sporulation protein F GII85_06290 PF00580 UvrD/REP helicase N-terminal domain GII85_06290 PF13361 UvrD-like helicase C-terminal domain GII85_06300 PF13673 Acetyltransferase (GNAT) domain GII85_06310 PF00756 Putative esterase GII85_06315 PF01053 Cys/Met metabolism PLP-dependent enzyme GII85_06320 PF01053 Cys/Met metabolism PLP-dependent enzyme GII85_06325 PF13302 Acetyltransferase (GNAT) domain GII85_06330 PF05684 Protein of unknown function (DUF819) GII85_06385 PF03992 Antibiotic biosynthesis monooxygenase GII85_06395 PF02368 Bacterial Ig-like domain (group 2) GII85_06400 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 GII85_06400 PF05043 Mga helix-turn-helix domain GII85_06400 PF00874 PRD domain GII85_06400 PF08279 HTH domain GII85_06405 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit GII85_06405 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 GII85_06405 PF02378 Phosphotransferase system, EIIC GII85_06410 PF01238 Phosphomannose isomerase type I GII85_06415 PF11208 Protein of unknown function (DUF2992) GII85_06420 PF13302 Acetyltransferase (GNAT) domain GII85_06430 PF04073 Aminoacyl-tRNA editing domain GII85_06435 PF13783 Domain of unknown function (DUF4177) GII85_06440 PF14154 Domain of unknown function (DUF4306) GII85_06445 PF01040 UbiA prenyltransferase family GII85_06455 PF11738 Protein of unknown function (DUF3298) GII85_06455 PF01522 Polysaccharide deacetylase GII85_06455 PF13739 Deacetylase PdaC GII85_06460 PF10901 Protein of unknown function (DUF2690) GII85_06465 PF14070 Putative motility protein GII85_06475 PF10990 Protein of unknown function (DUF2809) GII85_06480 PF14172 Domain of unknown function (DUF4309) GII85_06485 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region GII85_06485 PF04879 Molybdopterin oxidoreductase Fe4S4 domain GII85_06485 PF00384 Molybdopterin oxidoreductase GII85_06485 PF12838 4Fe-4S dicluster domain GII85_06485 PF01568 Molydopterin dinucleotide binding domain GII85_06490 PF07849 Protein of unknown function (DUF1641) GII85_06495 PF11611 Domain of unknown function (DUF4352) GII85_06500 PF00293 NUDIX domain GII85_06510 PF00067 Cytochrome P450 GII85_06515 PF04101 Glycosyltransferase family 28 C-terminal domain GII85_06525 PF02602 Uroporphyrinogen-III synthase HemD GII85_06530 PF03649 Uncharacterised protein family (UPF0014) GII85_06535 PF00005 ABC transporter GII85_06540 PF13536 Putative multidrug resistance efflux transporter GII85_06550 PF07849 Protein of unknown function (DUF1641) GII85_06555 PF07992 Pyridine nucleotide-disulphide oxidoreductase GII85_06560 PF02614 Glucuronate isomerase GII85_06570 PF02615 Malate/L-lactate dehydrogenase GII85_06575 PF08240 Alcohol dehydrogenase GroES-like domain GII85_06575 PF00107 Zinc-binding dehydrogenase GII85_06580 PF03786 D-mannonate dehydratase (UxuA) GII85_06585 PF00106 short chain dehydrogenase GII85_06590 PF07690 Major Facilitator Superfamily GII85_06595 PF00356 Bacterial regulatory proteins, lacI family GII85_06600 PF08125 Mannitol dehydrogenase C-terminal domain GII85_06600 PF01232 Mannitol dehydrogenase Rossmann domain GII85_06605 PF08666 SAF domain GII85_06605 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus GII85_06610 PF01925 Sulfite exporter TauE/SafE GII85_06615 PF05163 DinB family GII85_06620 PF00004 ATPase family associated with various cellular activities (AAA) GII85_06625 PF18801 response regulator aspartate phosphatase H, N terminal GII85_06635 PF03795 YCII-related domain GII85_06640 PF01476 LysM domain GII85_06640 PF01510 N-acetylmuramoyl-L-alanine amidase GII85_06640 PF01471 Putative peptidoglycan binding domain GII85_06645 PF08000 Bacterial PH domain GII85_06650 PF05908 Poly-gamma-glutamate hydrolase GII85_06655 PF05067 Manganese containing catalase GII85_06660 PF06114 IrrE N-terminal-like domain GII85_06665 PF01381 Helix-turn-helix GII85_06680 PF01695 IstB-like ATP binding protein GII85_06695 PF17356 Phage-like element PBSX protein XtrA GII85_06700 PF08281 Sigma-70, region 4 GII85_06705 PF03592 Terminase small subunit GII85_06705 PF10668 Phage terminase small subunit GII85_06710 PF17288 Terminase RNAseH like domain GII85_06710 PF04466 Phage terminase large subunit GII85_06715 PF04860 Phage portal protein GII85_06720 PF14550 Putative phage serine protease XkdF GII85_06725 PF05065 Phage capsid family GII85_06730 PF11436 Protein of unknown function (DUF3199) GII85_06735 PF12206 Domain of unknown function (DUF3599) GII85_06740 PF04883 Bacteriophage HK97-gp10, putative tail-component GII85_06755 PF17481 Phage tail sheath protein beta-sandwich domain GII85_06755 PF17482 Phage tail sheath C-terminal domain GII85_06755 PF04984 Phage tail sheath protein subtilisin-like domain GII85_06760 PF09393 Phage tail tube protein GII85_06765 PF08890 Phage XkdN-like tail assembly chaperone protein, TAC GII85_06775 PF01464 Transglycosylase SLT domain GII85_06780 PF01476 LysM domain GII85_06790 PF10844 Protein of unknown function (DUF2577) GII85_06795 PF10934 Protein of unknown function (DUF2634) GII85_06800 PF04865 Baseplate J-like protein GII85_06805 PF10076 Uncharacterised protein conserved in bacteria (DUF2313) GII85_06820 PF09636 XkdW protein GII85_06825 PF09693 Phage uncharacterised protein (Phage_XkdX) GII85_06835 PF10779 Haemolysin XhlA GII85_06840 PF04688 SPP1 phage holin GII85_06845 PF01510 N-acetylmuramoyl-L-alanine amidase GII85_06845 PF01471 Putative peptidoglycan binding domain GII85_06845 PF01476 LysM domain GII85_06855 PF14185 Antitoxin SpoIISB, type II toxin-antitoxin system GII85_06860 PF14171 Toxin SpoIISA, type II toxin-antitoxin system GII85_06865 PF01384 Phosphate transporter family GII85_06870 PF01865 Protein of unknown function DUF47 GII85_06875 PF13520 Amino acid permease GII85_06880 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily GII85_06890 PF13231 Dolichyl-phosphate-mannose-protein mannosyltransferase GII85_06895 PF00535 Glycosyl transferase family 2 GII85_06900 PF13180 PDZ domain GII85_06905 PF14748 Pyrroline-5-carboxylate reductase dimerisation GII85_06905 PF03807 NADP oxidoreductase coenzyme F420-dependent GII85_06910 PF04951 D-aminopeptidase GII85_06915 PF00528 Binding-protein-dependent transport system inner membrane component GII85_06920 PF00528 Binding-protein-dependent transport system inner membrane component GII85_06920 PF12911 N-terminal TM domain of oligopeptide transport permease C GII85_06925 PF00005 ABC transporter GII85_06925 PF08352 Oligopeptide/dipeptide transporter, C-terminal region GII85_06930 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle GII85_06935 PF17676 LD-carboxypeptidase C-terminal domain GII85_06935 PF02016 LD-carboxypeptidase N-terminal domain GII85_06940 PF13378 Enolase C-terminal domain-like GII85_06940 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain GII85_06945 PF00877 NlpC/P60 family GII85_06950 PF08352 Oligopeptide/dipeptide transporter, C-terminal region GII85_06950 PF00005 ABC transporter GII85_06955 PF10282 Lactonase, 7-bladed beta-propeller GII85_06965 PF03061 Thioesterase superfamily GII85_06970 PF00175 Oxidoreductase NAD-binding domain GII85_06970 PF00042 Globin GII85_06970 PF00970 Oxidoreductase FAD-binding domain GII85_06980 PF04239 Protein of unknown function (DUF421) GII85_06985 PF12867 DinB superfamily GII85_06990 PF13302 Acetyltransferase (GNAT) domain GII85_06995 PF00893 Small Multidrug Resistance protein GII85_07000 PF00893 Small Multidrug Resistance protein GII85_07005 PF00551 Formyl transferase GII85_07005 PF01842 ACT domain GII85_07010 PF01472 PUA domain GII85_07010 PF00696 Amino acid kinase family GII85_07015 PF00171 Aldehyde dehydrogenase family GII85_07020 PF02566 OsmC-like protein GII85_07025 PF01047 MarR family GII85_07030 PF02566 OsmC-like protein GII85_07040 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region GII85_07045 PF01717 Cobalamin-independent synthase, Catalytic domain GII85_07045 PF08267 Cobalamin-independent synthase, N-terminal domain GII85_07050 PF00082 Subtilase family GII85_07055 PF01740 STAS domain GII85_07060 PF02361 Cobalt transport protein GII85_07065 PF00005 ABC transporter GII85_07070 PF09819 ABC-type cobalt transport system, permease component GII85_07075 PF07615 YKOF-related Family GII85_07080 PF00486 Transcriptional regulatory protein, C terminal GII85_07080 PF00072 Response regulator receiver domain GII85_07085 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GII85_07085 PF00672 HAMP domain GII85_07085 PF00512 His Kinase A (phospho-acceptor) domain GII85_07090 PF03413 Peptidase propeptide and YPEB domain GII85_07095 PF03413 Peptidase propeptide and YPEB domain GII85_07100 PF11132 Transcriptional regulator protein (SplA) GII85_07110 PF01769 Divalent cation transporter GII85_07110 PF00571 CBS domain GII85_07110 PF03448 MgtE intracellular N domain GII85_07115 PF13411 MerR HTH family regulatory protein GII85_07130 PF01047 MarR family GII85_07135 PF06925 Monogalactosyldiacylglycerol (MGDG) synthase GII85_07145 PF00149 Calcineurin-like phosphoesterase GII85_07155 PF00535 Glycosyl transferase family 2 GII85_07160 PF01068 ATP dependent DNA ligase domain GII85_07165 PF02735 Ku70/Ku80 beta-barrel domain GII85_07170 PF03707 Bacterial signalling protein N terminal repeat GII85_07170 PF00990 Diguanylate cyclase, GGDEF domain GII85_07170 PF00563 EAL domain GII85_07175 PF09335 SNARE associated Golgi protein GII85_07180 PF03741 Integral membrane protein TerC family GII85_07185 PF04542 Sigma-70 region 2 GII85_07190 PF12791 Anti-sigma factor N-terminus GII85_07195 PF00269 Small, acid-soluble spore proteins, alpha/beta type GII85_07200 PF08876 Domain of unknown function (DUF1836) GII85_07205 PF01435 Peptidase family M48 GII85_07210 PF02386 Cation transport protein GII85_07225 PF01757 Acyltransferase family GII85_07230 PF00512 His Kinase A (phospho-acceptor) domain GII85_07230 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GII85_07230 PF00989 PAS fold GII85_07230 PF13188 PAS domain GII85_07230 PF13426 PAS domain GII85_07235 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain GII85_07235 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain GII85_07245 PF01008 Initiation factor 2 subunit family GII85_07250 PF01636 Phosphotransferase enzyme family GII85_07255 PF00795 Carbon-nitrogen hydrolase GII85_07260 PF00155 Aminotransferase class I and II GII85_07265 PF00016 Ribulose bisphosphate carboxylase large chain, catalytic domain GII85_07265 PF02788 Ribulose bisphosphate carboxylase large chain, N-terminal domain GII85_07275 PF00596 Class II Aldolase and Adducin N-terminal domain GII85_07280 PF03079 ARD/ARD' family GII85_07285 PF06803 Protein of unknown function (DUF1232) GII85_07290 PF09388 Spo0E like sporulation regulatory protein GII85_07300 PF00512 His Kinase A (phospho-acceptor) domain GII85_07300 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GII85_07300 PF02743 Cache domain GII85_07305 PF01047 MarR family GII85_07310 PF13677 Membrane MotB of proton-channel complex MotA/MotB GII85_07310 PF00691 OmpA family GII85_07315 PF01618 MotA/TolQ/ExbB proton channel family GII85_07320 PF10431 C-terminal, D2-small domain, of ClpB protein GII85_07320 PF17871 AAA lid domain GII85_07320 PF07724 AAA domain (Cdc48 subfamily) GII85_07320 PF00004 ATPase family associated with various cellular activities (AAA) GII85_07330 PF06508 Queuosine biosynthesis protein QueC GII85_07335 PF01242 6-pyruvoyl tetrahydropterin synthase GII85_07340 PF04055 Radical SAM superfamily GII85_07345 PF14489 QueF-like protein GII85_07350 PF01638 HxlR-like helix-turn-helix GII85_07360 PF01476 LysM domain GII85_07365 PF01476 LysM domain GII85_07370 PF00704 Glycosyl hydrolases family 18 GII85_07375 PF11514 Protein of unknown function (DUF3219) GII85_07380 PF09953 Uncharacterized protein conserved in bacteria (DUF2187) GII85_07390 PF07486 Cell Wall Hydrolase GII85_07395 PF01943 Polysaccharide biosynthesis protein GII85_07400 PF00578 AhpC/TSA family GII85_07415 PF01321 Creatinase/Prolidase N-terminal domain GII85_07415 PF00557 Metallopeptidase family M24 GII85_07420 PF00356 Bacterial regulatory proteins, lacI family GII85_07420 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family GII85_07425 PF03123 CAT RNA binding domain GII85_07425 PF00874 PRD domain GII85_07430 PF00367 phosphotransferase system, EIIB GII85_07430 PF02378 Phosphotransferase system, EIIC GII85_07430 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 GII85_07435 PF00381 PTS HPr component phosphorylation site GII85_07440 PF00391 PEP-utilising enzyme, mobile domain GII85_07440 PF02896 PEP-utilising enzyme, TIM barrel domain GII85_07440 PF05524 PEP-utilising enzyme, N-terminal GII85_07445 PF11132 Transcriptional regulator protein (SplA) GII85_07455 PF00583 Acetyltransferase (GNAT) family GII85_07460 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GII85_07460 PF00672 HAMP domain GII85_07460 PF02743 Cache domain GII85_07465 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase GII85_07465 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase GII85_07475 PF00188 Cysteine-rich secretory protein family GII85_07480 PF03717 Penicillin-binding Protein dimerisation domain GII85_07480 PF00905 Penicillin binding protein transpeptidase domain GII85_07485 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GII85_07485 PF00989 PAS fold GII85_07485 PF08447 PAS fold GII85_07485 PF00512 His Kinase A (phospho-acceptor) domain GII85_07490 PF00155 Aminotransferase class I and II GII85_07500 PF01584 CheW-like domain GII85_07500 PF00072 Response regulator receiver domain GII85_07505 PF14177 YkyB-like protein GII85_07510 PF07690 Major Facilitator Superfamily GII85_07515 PF03734 L,D-transpeptidase catalytic domain GII85_07515 PF01476 LysM domain GII85_07520 PF10518 TAT (twin-arginine translocation) pathway signal sequence GII85_07520 PF00149 Calcineurin-like phosphoesterase GII85_07530 PF00563 EAL domain GII85_07530 PF10388 EAL-domain associated signalling protein domain GII85_07535 PF08796 Protein of unknown function (DUF1797) GII85_07540 PF04308 Ribonuclease H-like GII85_07545 PF14156 Antirepressor AbbA GII85_07555 PF03466 LysR substrate binding domain GII85_07555 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GII85_07560 PF00258 Flavodoxin GII85_07570 PF00258 Flavodoxin GII85_07575 PF00132 Bacterial transferase hexapeptide (six repeats) GII85_07575 PF14602 Hexapeptide repeat of succinyl-transferase GII85_07575 PF08503 Tetrahydrodipicolinate succinyltransferase N-terminal GII85_07580 PF01546 Peptidase family M20/M25/M40 GII85_07580 PF07687 Peptidase dimerisation domain GII85_07585 PF03698 Uncharacterised protein family (UPF0180) GII85_07590 PF00924 Mechanosensitive ion channel GII85_07595 PF10417 C-terminal domain of 1-Cys peroxiredoxin GII85_07595 PF00578 AhpC/TSA family GII85_07600 PF00578 AhpC/TSA family GII85_07615 PF12804 MobA-like NTP transferase domain GII85_07620 PF00899 ThiF family GII85_07625 PF03454 MoeA C-terminal region (domain IV) GII85_07625 PF00994 Probable molybdopterin binding domain GII85_07625 PF03453 MoeA N-terminal region (domain I and II) GII85_07630 PF03205 Molybdopterin guanine dinucleotide synthesis protein B GII85_07635 PF02391 MoaE protein GII85_07640 PF02597 ThiS family GII85_07645 PF00664 ABC transporter transmembrane region GII85_07645 PF00005 ABC transporter GII85_07650 PF00005 ABC transporter GII85_07650 PF00664 ABC transporter transmembrane region GII85_07655 PF04893 Yip1 domain GII85_07660 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion GII85_07665 PF00005 ABC transporter GII85_07670 PF02687 FtsX-like permease family GII85_07670 PF12704 MacB-like periplasmic core domain GII85_07675 PF08220 DeoR-like helix-turn-helix domain GII85_07675 PF00455 DeoR C terminal sensor domain GII85_07680 PF00294 pfkB family carbohydrate kinase GII85_07685 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit GII85_07685 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 GII85_07690 PF10502 Signal peptidase, peptidase S26 GII85_07700 PF12848 ABC transporter GII85_07700 PF00005 ABC transporter GII85_07705 PF02558 Ketopantoate reductase PanE/ApbA GII85_07705 PF08546 Ketopantoate reductase PanE/ApbA C terminal GII85_07710 PF02073 Thermophilic metalloprotease (M29) GII85_07715 PF17447 Uncharacterized YkpC-like GII85_07725 PF18277 AbrB C-terminal domain GII85_07725 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin GII85_07730 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GII85_07730 PF00512 His Kinase A (phospho-acceptor) domain GII85_07730 PF00989 PAS fold GII85_07735 PF06094 Gamma-glutamyl cyclotransferase, AIG2-like GII85_07740 PF02080 TrkA-C domain GII85_07740 PF02254 TrkA-N domain GII85_07745 PF01979 Amidohydrolase family GII85_07745 PF13382 Adenine deaminase C-terminal domain GII85_07750 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain GII85_07750 PF17770 Ribonuclease J C-terminal domain GII85_07750 PF00753 Metallo-beta-lactamase superfamily GII85_07765 PF01327 Polypeptide deformylase GII85_07775 PF10368 Putative cell-wall binding lipoprotein GII85_07780 PF00676 Dehydrogenase E1 component GII85_07785 PF02780 Transketolase, C-terminal domain GII85_07785 PF02779 Transketolase, pyrimidine binding domain GII85_07790 PF02817 e3 binding domain GII85_07790 PF00364 Biotin-requiring enzyme GII85_07790 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) GII85_07795 PF07992 Pyridine nucleotide-disulphide oxidoreductase GII85_07795 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GII85_07805 PF13790 SR1 protein GII85_07810 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain GII85_07810 PF01276 Orn/Lys/Arg decarboxylase, major domain GII85_07815 PF05256 Uncharacterised protein family (UPF0223) GII85_07820 PF06335 Protein of unknown function (DUF1054) GII85_07830 PF00459 Inositol monophosphatase family GII85_07835 PF00583 Acetyltransferase (GNAT) family GII85_07840 PF04072 Leucine carboxyl methyltransferase GII85_07845 PF07504 Fungalysin/Thermolysin Propeptide Motif GII85_07845 PF03413 Peptidase propeptide and YPEB domain GII85_07845 PF01447 Thermolysin metallopeptidase, catalytic domain GII85_07845 PF02868 Thermolysin metallopeptidase, alpha-helical domain GII85_07865 PF13490 Putative zinc-finger GII85_07875 PF17259 Family of unknown function (DUF5325) GII85_07885 PF14036 YlaH-like protein GII85_07890 PF09963 Uncharacterized protein conserved in bacteria (DUF2197) GII85_07895 PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) GII85_07900 PF02562 PhoH-like protein GII85_07900 PF13638 PIN domain GII85_07910 PF04960 Glutaminase GII85_07915 PF07408 Protein of unknown function (DUF1507) GII85_07920 PF01098 Cell cycle protein GII85_07925 PF02436 Conserved carboxylase domain GII85_07925 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain GII85_07925 PF00364 Biotin-requiring enzyme GII85_07925 PF00682 HMGL-like GII85_07925 PF00289 Biotin carboxylase, N-terminal domain GII85_07925 PF02785 Biotin carboxylase C-terminal domain GII85_07930 PF02628 Cytochrome oxidase assembly protein GII85_07935 PF01040 UbiA prenyltransferase family GII85_07940 PF00034 Cytochrome c GII85_07940 PF02790 Cytochrome C oxidase subunit II, transmembrane domain GII85_07940 PF00116 Cytochrome C oxidase subunit II, periplasmic domain GII85_07945 PF00115 Cytochrome C and Quinol oxidase polypeptide I GII85_07950 PF00510 Cytochrome c oxidase subunit III GII85_07955 PF03626 Prokaryotic Cytochrome C oxidase subunit IV GII85_07960 PF09678 Cytochrome c oxidase caa3 assembly factor (Caa3_CtaG) GII85_07965 PF08868 YugN-like family GII85_07970 PF00571 CBS domain GII85_07975 PF00188 Cysteine-rich secretory protein family GII85_07975 PF14504 CAP-associated N-terminal GII85_07980 PF14071 Putative coat protein GII85_07985 PF14003 YlbE-like protein GII85_07990 PF06133 Control of competence regulator ComK, YlbF/YmcA GII85_07995 PF09902 Uncharacterized protein conserved in bacteria (DUF2129) GII85_08005 PF01467 Cytidylyltransferase-like GII85_08010 PF07670 Nucleoside recognition GII85_08015 PF01734 Patatin-like phospholipase GII85_08020 PF05362 Lon protease (S16) C-terminal proteolytic domain GII85_08020 PF13180 PDZ domain GII85_08025 PF05636 HIGH Nucleotidyl Transferase GII85_08035 PF02620 Large ribosomal RNA subunit accumulation protein YceD GII85_08040 PF01783 Ribosomal L32p protein family GII85_08050 PF00583 Acetyltransferase (GNAT) family GII85_08055 PF08546 Ketopantoate reductase PanE/ApbA C terminal GII85_08055 PF02558 Ketopantoate reductase PanE/ApbA GII85_08060 PF10079 Bacillithiol biosynthesis BshC GII85_08065 PF02381 MraZ protein, putative antitoxin-like GII85_08070 PF01795 MraW methylase family GII85_08085 PF03793 PASTA domain GII85_08085 PF03717 Penicillin-binding Protein dimerisation domain GII85_08085 PF00905 Penicillin binding protein transpeptidase domain GII85_08090 PF08245 Mur ligase middle domain GII85_08090 PF02875 Mur ligase family, glutamate ligase domain GII85_08090 PF01225 Mur ligase family, catalytic domain GII85_08095 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 GII85_08095 PF00953 Glycosyl transferase family 4 GII85_08100 PF02875 Mur ligase family, glutamate ligase domain GII85_08100 PF08245 Mur ligase middle domain GII85_08105 PF01098 Cell cycle protein GII85_08110 PF04101 Glycosyltransferase family 28 C-terminal domain GII85_08110 PF03033 Glycosyltransferase family 28 N-terminal domain GII85_08115 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain GII85_08115 PF01565 FAD binding domain GII85_08120 PF08478 POTRA domain, FtsQ-type GII85_08125 PF05949 Bacterial protein of unknown function (DUF881) GII85_08130 PF05949 Bacterial protein of unknown function (DUF881) GII85_08135 PF06947 Protein of unknown function (DUF1290) GII85_08140 PF02491 SHS2 domain inserted in FTSA GII85_08145 PF00091 Tubulin/FtsZ family, GTPase domain GII85_08145 PF12327 FtsZ family, C-terminal domain GII85_08150 PF00082 Subtilase family GII85_08150 PF05922 Peptidase inhibitor I9 GII85_08155 PF03419 Sporulation factor SpoIIGA GII85_08160 PF04545 Sigma-70, region 4 GII85_08160 PF04542 Sigma-70 region 2 GII85_08165 PF04545 Sigma-70, region 4 GII85_08165 PF04539 Sigma-70 region 3 GII85_08165 PF04542 Sigma-70 region 2 GII85_08170 PF00005 ABC transporter GII85_08175 PF01546 Peptidase family M20/M25/M40 GII85_08175 PF07687 Peptidase dimerisation domain GII85_08180 PF05239 PRC-barrel domain GII85_08190 PF01168 Alanine racemase, N-terminal domain GII85_08195 PF04472 Cell division protein SepF GII85_08200 PF02325 YGGT family GII85_08205 PF01479 S4 domain GII85_08205 PF17774 Putative RNA-binding domain in YlmH GII85_08210 PF05103 DivIVA protein GII85_08215 PF00133 tRNA synthetases class I (I, L, M and V) GII85_08215 PF08264 Anticodon-binding domain of tRNA GII85_08220 PF01258 Prokaryotic dksA/traR C4-type zinc finger GII85_08225 PF01252 Signal peptidase (SPase) II GII85_08230 PF00849 RNA pseudouridylate synthase GII85_08230 PF01479 S4 domain GII85_08235 PF00156 Phosphoribosyl transferase domain GII85_08240 PF00860 Permease family GII85_08245 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain GII85_08245 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain GII85_08250 PF01979 Amidohydrolase family GII85_08255 PF00117 Glutamine amidotransferase class-I GII85_08255 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain GII85_08260 PF02142 MGS-like domain GII85_08260 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain GII85_08260 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain GII85_08265 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B GII85_08265 PF00175 Oxidoreductase NAD-binding domain GII85_08270 PF01180 Dihydroorotate dehydrogenase GII85_08275 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family GII85_08280 PF00156 Phosphoribosyl transferase domain GII85_08285 PF01507 Phosphoadenosine phosphosulfate reductase family GII85_08290 PF01384 Phosphate transporter family GII85_08295 PF01747 ATP-sulfurylase GII85_08295 PF14306 PUA-like domain GII85_08305 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases GII85_08310 PF01903 CbiX GII85_08325 PF00690 Cation transporter/ATPase, N-terminus GII85_08325 PF00689 Cation transporting ATPase, C-terminus GII85_08330 PF08340 Domain of unknown function (DUF1732) GII85_08330 PF03755 YicC-like family, N-terminal region GII85_08335 PF04025 Domain of unknown function (DUF370) GII85_08340 PF00625 Guanylate kinase GII85_08345 PF01192 RNA polymerase Rpb6 GII85_08350 PF04127 DNA / pantothenate metabolism flavoprotein GII85_08350 PF02441 Flavoprotein GII85_08355 PF18319 PriA DNA helicase Cys-rich region (CRR) domain GII85_08355 PF00271 Helicase conserved C-terminal domain GII85_08355 PF17764 3′ DNA-binding domain (3′BD) GII85_08355 PF04851 Type III restriction enzyme, res subunit GII85_08355 PF18074 Primosomal protein N C-terminal domain GII85_08360 PF01327 Polypeptide deformylase GII85_08365 PF02911 Formyl transferase, C-terminal domain GII85_08365 PF00551 Formyl transferase GII85_08370 PF01189 16S rRNA methyltransferase RsmB/F GII85_08370 PF01029 NusB family GII85_08375 PF04055 Radical SAM superfamily GII85_08385 PF03793 PASTA domain GII85_08385 PF00069 Protein kinase domain GII85_08390 PF16745 RsgA N-terminal domain GII85_08390 PF03193 RsgA GTPase GII85_08395 PF00834 Ribulose-phosphate 3 epimerase family GII85_08400 PF04265 Thiamin pyrophosphokinase, vitamin B1 binding domain GII85_08400 PF04263 Thiamin pyrophosphokinase, catalytic domain GII85_08405 PF08183 Stage V sporulation protein family GII85_08410 PF00830 Ribosomal L28 family GII85_08415 PF03780 Asp23 family, cell envelope-related function GII85_08420 PF02734 DAK2 domain GII85_08420 PF13684 Dihydroxyacetone kinase family GII85_08425 PF01842 ACT domain GII85_08425 PF03315 Serine dehydratase beta chain GII85_08430 PF03313 Serine dehydratase alpha chain GII85_08435 PF00271 Helicase conserved C-terminal domain GII85_08435 PF00270 DEAD/DEAH box helicase GII85_08435 PF17191 RecG wedge domain GII85_08440 PF03061 Thioesterase superfamily GII85_08445 PF02504 Fatty acid synthesis protein GII85_08450 PF00698 Acyl transferase domain GII85_08460 PF00550 Phosphopantetheine attachment site GII85_08465 PF14622 Ribonuclease-III-like GII85_08465 PF00035 Double-stranded RNA binding motif GII85_08470 PF02463 RecF/RecN/SMC N terminal domain GII85_08470 PF06470 SMC proteins Flexible Hinge Domain GII85_08475 PF00448 SRP54-type protein, GTPase domain GII85_08475 PF02881 SRP54-type protein, helical bundle domain GII85_08480 PF02369 Bacterial Ig-like domain (group 1) GII85_08485 PF04297 Putative helix-turn-helix protein, YlxM / p13 like GII85_08490 PF00448 SRP54-type protein, GTPase domain GII85_08490 PF02881 SRP54-type protein, helical bundle domain GII85_08490 PF02978 Signal peptide binding domain GII85_08495 PF00886 Ribosomal protein S16 GII85_08505 PF11068 YlqD protein GII85_08510 PF01782 RimM N-terminal domain GII85_08510 PF05239 PRC-barrel domain GII85_08515 PF01746 tRNA (Guanine-1)-methyltransferase GII85_08520 PF01245 Ribosomal protein L19 GII85_08525 PF01926 50S ribosome-binding GTPase GII85_08530 PF01351 Ribonuclease HII GII85_08540 PF01312 FlhB HrpN YscU SpaS Family GII85_08545 PF00549 CoA-ligase GII85_08545 PF08442 ATP-grasp domain GII85_08550 PF02629 CoA binding domain GII85_08550 PF00549 CoA-ligase GII85_08555 PF02481 DNA recombination-mediator protein A GII85_08560 PF01751 Toprim domain GII85_08560 PF01396 Topoisomerase DNA binding C4 zinc finger GII85_08560 PF01131 DNA topoisomerase GII85_08565 PF01134 Glucose inhibited division protein A GII85_08570 PF00589 Phage integrase family GII85_08570 PF02899 Phage integrase, N-terminal SAM-like domain GII85_08575 PF00227 Proteasome subunit GII85_08580 PF10431 C-terminal, D2-small domain, of ClpB protein GII85_08580 PF07724 AAA domain (Cdc48 subfamily) GII85_08580 PF00004 ATPase family associated with various cellular activities (AAA) GII85_08585 PF08222 CodY helix-turn-helix domain GII85_08585 PF06018 CodY GAF-like domain GII85_08590 PF00460 Flagella basal body rod protein GII85_08595 PF00460 Flagella basal body rod protein GII85_08595 PF06429 Flagellar basal body rod FlgEFG protein C-terminal GII85_08600 PF02049 Flagellar hook-basal body complex protein FliE GII85_08605 PF08345 Flagellar M-ring protein C-terminal GII85_08605 PF01514 Secretory protein of YscJ/FliF family GII85_08610 PF14842 FliG N-terminal domain GII85_08610 PF14841 FliG middle domain GII85_08610 PF01706 FliG C-terminal domain GII85_08615 PF02108 Flagellar assembly protein FliH GII85_08620 PF02874 ATP synthase alpha/beta family, beta-barrel domain GII85_08620 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain GII85_08620 PF18269 T3SS EscN ATPase C-terminal domain GII85_08625 PF02050 Flagellar FliJ protein GII85_08630 PF03448 MgtE intracellular N domain GII85_08635 PF02120 Flagellar hook-length control protein FliK GII85_08640 PF03963 Flagellar hook capping protein - N-terminal region GII85_08645 PF00460 Flagella basal body rod protein GII85_08645 PF06429 Flagellar basal body rod FlgEFG protein C-terminal GII85_08650 PF06289 Flagellar and Swarming motility proteins GII85_08655 PF03748 Flagellar basal body-associated protein FliL GII85_08660 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term GII85_08660 PF02154 Flagellar motor switch protein FliM GII85_08665 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term GII85_08665 PF04509 CheC-like family GII85_08670 PF00072 Response regulator receiver domain GII85_08675 PF04347 Flagellar biosynthesis protein, FliO GII85_08680 PF00813 FliP family GII85_08685 PF01313 Bacterial export proteins, family 3 GII85_08690 PF01311 Bacterial export proteins, family 1 GII85_08695 PF01312 FlhB HrpN YscU SpaS Family GII85_08700 PF00771 FHIPEP family GII85_08705 PF00448 SRP54-type protein, GTPase domain GII85_08710 PF10609 NUBPL iron-transfer P-loop NTPase GII85_08715 PF01339 CheB methylesterase GII85_08715 PF00072 Response regulator receiver domain GII85_08720 PF07194 P2 response regulator binding domain GII85_08720 PF02895 Signal transducing histidine kinase, homodimeric domain GII85_08720 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GII85_08720 PF01584 CheW-like domain GII85_08720 PF01627 Hpt domain GII85_08725 PF01584 CheW-like domain GII85_08730 PF04509 CheC-like family GII85_08735 PF03975 CheD chemotactic sensory transduction GII85_08740 PF04539 Sigma-70 region 3 GII85_08740 PF04542 Sigma-70 region 2 GII85_08740 PF04545 Sigma-70, region 4 GII85_08750 PF00318 Ribosomal protein S2 GII85_08755 PF00889 Elongation factor TS GII85_08760 PF00696 Amino acid kinase family GII85_08765 PF01765 Ribosome recycling factor GII85_08770 PF01255 Putative undecaprenyl diphosphate synthase GII85_08780 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain GII85_08780 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase GII85_08780 PF13288 DXP reductoisomerase C-terminal domain GII85_08785 PF17820 PDZ domain GII85_08785 PF02163 Peptidase family M50 GII85_08790 PF04073 Aminoacyl-tRNA editing domain GII85_08790 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) GII85_08790 PF03129 Anticodon binding domain GII85_08795 PF02811 PHP domain GII85_08795 PF11490 DNA polymerase III polC-type N-terminus II GII85_08795 PF07733 Bacterial DNA polymerase III alpha NTPase domain GII85_08795 PF17657 Bacterial DNA polymerase III alpha subunit finger domain GII85_08795 PF14480 DNA polymerase III polC-type N-terminus I GII85_08795 PF14579 Helix-hairpin-helix motif GII85_08795 PF00929 Exonuclease GII85_08805 PF14028 Lantibiotic biosynthesis dehydratase C-term GII85_08805 PF04738 Lantibiotic dehydratase, N terminus GII85_08810 PF00005 ABC transporter GII85_08815 PF05147 Lanthionine synthetase C-like protein GII85_08820 PF17384 RimP C-terminal SH3 domain GII85_08820 PF02576 RimP N-terminal domain GII85_08825 PF08529 NusA N-terminal domain GII85_08825 PF00575 S1 RNA binding domain GII85_08825 PF13184 NusA-like KH domain GII85_08830 PF04296 Protein of unknown function (DUF448) GII85_08835 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family GII85_08840 PF00009 Elongation factor Tu GTP binding domain GII85_08840 PF04760 Translation initiation factor IF-2, N-terminal region GII85_08840 PF11987 Translation-initiation factor 2 GII85_08845 PF04456 Protein of unknown function (DUF503) GII85_08850 PF02033 Ribosome-binding factor A GII85_08855 PF01509 TruB family pseudouridylate synthase (N terminal domain) GII85_08855 PF16198 tRNA pseudouridylate synthase B C-terminal domain GII85_08860 PF01687 Riboflavin kinase GII85_08860 PF06574 FAD synthetase GII85_08865 PF00312 Ribosomal protein S15 GII85_08870 PF00013 KH domain GII85_08870 PF03725 3' exoribonuclease family, domain 2 GII85_08870 PF01138 3' exoribonuclease family, domain 1 GII85_08870 PF00575 S1 RNA binding domain GII85_08870 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain GII85_08875 PF01522 Polysaccharide deacetylase GII85_08880 PF00675 Insulinase (Peptidase family M16) GII85_08880 PF05193 Peptidase M16 inactive domain GII85_08885 PF05239 PRC-barrel domain GII85_08890 PF01262 Alanine dehydrogenase/PNT, C-terminal domain GII85_08890 PF16924 Dipicolinate synthase subunit A N-terminal domain GII85_08895 PF02441 Flavoprotein GII85_08900 PF02774 Semialdehyde dehydrogenase, dimerisation domain GII85_08900 PF01118 Semialdehyde dehydrogenase, NAD binding domain GII85_08905 PF00696 Amino acid kinase family GII85_08905 PF13840 ACT domain GII85_08910 PF00701 Dihydrodipicolinate synthetase family GII85_08915 PF00753 Metallo-beta-lactamase superfamily GII85_08915 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain GII85_08915 PF17770 Ribonuclease J C-terminal domain GII85_08920 PF00574 Clp protease GII85_08925 PF14035 YlzJ-like protein GII85_08930 PF01580 FtsK/SpoIIIE family GII85_08930 PF09397 Ftsk gamma domain GII85_08930 PF17854 FtsK alpha domain GII85_08935 PF00392 Bacterial regulatory proteins, gntR family GII85_08935 PF07702 UTRA domain GII85_08940 PF07690 Major Facilitator Superfamily GII85_08945 PF05193 Peptidase M16 inactive domain GII85_08950 PF05193 Peptidase M16 inactive domain GII85_08950 PF00675 Insulinase (Peptidase family M16) GII85_08960 PF11588 Protein of unknown function (DUF3243) GII85_08965 PF11868 Protein of unknown function (DUF3388) GII85_08970 PF13464 Domain of unknown function (DUF4115) GII85_08975 PF01066 CDP-alcohol phosphatidyltransferase GII85_08980 PF00994 Probable molybdopterin binding domain GII85_08980 PF18146 Damage-inducible protein CinA KH domain GII85_08980 PF02464 Competence-damaged protein GII85_08985 PF00154 recA bacterial DNA recombination protein GII85_08990 PF00144 Beta-lactamase GII85_08995 PF12072 Domain of unknown function (DUF3552) GII85_08995 PF00013 KH domain GII85_08995 PF01966 HD domain GII85_09000 PF13277 YmdB-like protein GII85_09005 PF04232 Stage V sporulation protein S (SpoVS) GII85_09010 PF00107 Zinc-binding dehydrogenase GII85_09010 PF08240 Alcohol dehydrogenase GroES-like domain GII85_09015 PF00155 Aminotransferase class I and II GII85_09020 PF04055 Radical SAM superfamily GII85_09020 PF00919 Uncharacterized protein family UPF0004 GII85_09020 PF01938 TRAM domain GII85_09025 PF06133 Control of competence regulator ComK, YlbF/YmcA GII85_09030 PF10628 Outer spore coat protein E (CotE) GII85_09035 PF00488 MutS domain V GII85_09035 PF05192 MutS domain III GII85_09035 PF05188 MutS domain II GII85_09035 PF01624 MutS domain I GII85_09035 PF05190 MutS family domain IV GII85_09040 PF08676 MutL C terminal dimerisation domain GII85_09040 PF01119 DNA mismatch repair protein, C-terminal domain GII85_09045 PF14184 Regulatory protein YrvL GII85_09055 PF00440 Bacterial regulatory proteins, tetR family GII85_09055 PF13977 BetI-type transcriptional repressor, C-terminal GII85_09060 PF00753 Metallo-beta-lactamase superfamily GII85_09070 PF00698 Acyl transferase domain GII85_09075 PF00698 Acyl transferase domain GII85_09080 PF03060 Nitronate monooxygenase GII85_09080 PF00698 Acyl transferase domain GII85_09085 PF00550 Phosphopantetheine attachment site GII85_09090 PF02801 Beta-ketoacyl synthase, C-terminal domain GII85_09090 PF00109 Beta-ketoacyl synthase, N-terminal domain GII85_09095 PF08540 Hydroxymethylglutaryl-coenzyme A synthase C terminal GII85_09095 PF01154 Hydroxymethylglutaryl-coenzyme A synthase N terminal GII85_09100 PF00378 Enoyl-CoA hydratase/isomerase GII85_09105 PF00378 Enoyl-CoA hydratase/isomerase GII85_09110 PF08659 KR domain GII85_09110 PF14765 Polyketide synthase dehydratase GII85_09110 PF00109 Beta-ketoacyl synthase, N-terminal domain GII85_09110 PF00501 AMP-binding enzyme GII85_09110 PF00550 Phosphopantetheine attachment site GII85_09110 PF13193 AMP-binding enzyme C-terminal domain GII85_09110 PF02801 Beta-ketoacyl synthase, C-terminal domain GII85_09110 PF00668 Condensation domain GII85_09110 PF16197 Ketoacyl-synthetase C-terminal extension GII85_09115 PF00550 Phosphopantetheine attachment site GII85_09115 PF16197 Ketoacyl-synthetase C-terminal extension GII85_09115 PF00109 Beta-ketoacyl synthase, N-terminal domain GII85_09115 PF02801 Beta-ketoacyl synthase, C-terminal domain GII85_09115 PF14765 Polyketide synthase dehydratase GII85_09115 PF08659 KR domain GII85_09120 PF02801 Beta-ketoacyl synthase, C-terminal domain GII85_09120 PF00550 Phosphopantetheine attachment site GII85_09120 PF14765 Polyketide synthase dehydratase GII85_09120 PF16197 Ketoacyl-synthetase C-terminal extension GII85_09120 PF08242 Methyltransferase domain GII85_09120 PF08659 KR domain GII85_09120 PF00109 Beta-ketoacyl synthase, N-terminal domain GII85_09125 PF02801 Beta-ketoacyl synthase, C-terminal domain GII85_09125 PF08659 KR domain GII85_09125 PF16197 Ketoacyl-synthetase C-terminal extension GII85_09125 PF00501 AMP-binding enzyme GII85_09125 PF00550 Phosphopantetheine attachment site GII85_09125 PF14765 Polyketide synthase dehydratase GII85_09125 PF00668 Condensation domain GII85_09125 PF00109 Beta-ketoacyl synthase, N-terminal domain GII85_09125 PF13193 AMP-binding enzyme C-terminal domain GII85_09130 PF00550 Phosphopantetheine attachment site GII85_09130 PF16197 Ketoacyl-synthetase C-terminal extension GII85_09130 PF00109 Beta-ketoacyl synthase, N-terminal domain GII85_09130 PF00975 Thioesterase domain GII85_09130 PF14765 Polyketide synthase dehydratase GII85_09130 PF02801 Beta-ketoacyl synthase, C-terminal domain GII85_09130 PF08242 Methyltransferase domain GII85_09135 PF00067 Cytochrome P450 GII85_09150 PF00082 Subtilase family GII85_09160 PF05908 Poly-gamma-glutamate hydrolase GII85_09165 PF02566 OsmC-like protein GII85_09170 PF00893 Small Multidrug Resistance protein GII85_09175 PF00893 Small Multidrug Resistance protein GII85_09185 PF12788 YmaF family GII85_09195 PF17209 Hfq protein GII85_09200 PF14157 YmzC-like protein GII85_09210 PF07972 NrdI Flavodoxin like GII85_09215 PF00317 Ribonucleotide reductase, all-alpha domain GII85_09215 PF08343 Ribonucleotide reductase N-terminal GII85_09215 PF02867 Ribonucleotide reductase, barrel domain GII85_09220 PF00268 Ribonucleotide reductase, small chain GII85_09230 PF05036 Sporulation related domain GII85_09230 PF01520 N-acetylmuramoyl-L-alanine amidase GII85_09235 PF00004 ATPase family associated with various cellular activities (AAA) GII85_09235 PF17866 AAA lid domain GII85_09240 PF01926 50S ribosome-binding GTPase GII85_09240 PF13167 GTP-binding GTPase N-terminal GII85_09240 PF16360 GTP-binding GTPase Middle Region GII85_09245 PF06838 Methionine gamma-lyase GII85_09250 PF13411 MerR HTH family regulatory protein GII85_09255 PF00120 Glutamine synthetase, catalytic domain GII85_09255 PF03951 Glutamine synthetase, beta-Grasp domain GII85_09290 PF13302 Acetyltransferase (GNAT) domain GII85_09300 PF13021 Domain of unknown function (DUF3885) GII85_09330 PF04616 Glycosyl hydrolases family 43 GII85_09330 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain GII85_09335 PF00480 ROK family GII85_09340 PF01261 Xylose isomerase-like TIM barrel GII85_09345 PF00370 FGGY family of carbohydrate kinases, N-terminal domain GII85_09345 PF02782 FGGY family of carbohydrate kinases, C-terminal domain GII85_09360 PF00083 Sugar (and other) transporter GII85_09365 PF01168 Alanine racemase, N-terminal domain GII85_09365 PF00842 Alanine racemase, C-terminal domain GII85_09375 PF10903 Protein of unknown function (DUF2691) GII85_09380 PF00692 dUTPase GII85_09395 PF00303 Thymidylate synthase GII85_09405 PF15493 Domain of unknown function, YrpD GII85_09410 PF14037 YoqO-like protein GII85_09420 PF02416 mttA/Hcf106 family GII85_09435 PF08327 Activator of Hsp90 ATPase homolog 1-like protein GII85_09445 PF03323 Bacillus/Clostridium GerA spore germination protein GII85_09450 PF03845 Spore germination protein GII85_09455 PF05504 Spore germination B3/ GerAC like, C-terminal GII85_09465 PF13761 Domain of unknown function (DUF4166) GII85_09470 PF14158 YndJ-like protein GII85_09480 PF05908 Poly-gamma-glutamate hydrolase GII85_09485 PF10710 Protein of unknown function (DUF2512) GII85_09490 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily GII85_09495 PF00717 Peptidase S24-like GII85_09495 PF01726 LexA DNA binding domain GII85_09500 PF01476 LysM domain GII85_09505 PF00239 Resolvase, N terminal domain GII85_09510 PF05979 Bacterial protein of unknown function (DUF896) GII85_09515 PF02779 Transketolase, pyrimidine binding domain GII85_09515 PF00456 Transketolase, thiamine diphosphate binding domain GII85_09515 PF02780 Transketolase, C-terminal domain GII85_09520 PF10747 Sporulation inhibitor of replication protein SirA GII85_09525 PF03672 Uncharacterised protein family (UPF0154) GII85_09530 PF09388 Spo0E like sporulation regulatory protein GII85_09535 PF02683 Cytochrome C biogenesis protein transmembrane region GII85_09540 PF00072 Response regulator receiver domain GII85_09545 PF07301 Protein of unknown function (DUF1453) GII85_09550 PF11084 Protein of unknown function (DUF2621) GII85_09560 PF08179 Small acid-soluble spore protein P family GII85_09570 PF00694 Aconitase C-terminal domain GII85_09570 PF00330 Aconitase family (aconitate hydratase) GII85_09575 PF00578 AhpC/TSA family GII85_09580 PF13040 Fur-regulated basic protein B GII85_09585 PF08177 Small acid-soluble spore protein N family GII85_09595 PF03061 Thioesterase superfamily GII85_09605 PF01521 Iron-sulphur cluster biosynthesis GII85_09610 PF02660 Glycerol-3-phosphate acyltransferase GII85_09615 PF13380 CoA binding domain GII85_09620 PF00986 DNA gyrase B subunit, carboxyl terminus GII85_09620 PF01751 Toprim domain GII85_09620 PF00204 DNA gyrase B GII85_09620 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GII85_09625 PF00521 DNA gyrase/topoisomerase IV, subunit A GII85_09625 PF03989 DNA gyrase C-terminal domain, beta-propeller GII85_09635 PF01235 Sodium:alanine symporter family GII85_09640 PF00150 Cellulase (glycosyl hydrolase family 5) GII85_09640 PF00942 Cellulose binding domain GII85_09645 PF17452 Uncharacterized YnfE-like GII85_09650 PF17189 Glycosyl hydrolase family 30 beta sandwich domain GII85_09655 PF04616 Glycosyl hydrolases family 43 GII85_09655 PF03422 Carbohydrate binding module (family 6) GII85_09660 PF04138 GtrA-like protein GII85_09665 PF00483 Nucleotidyl transferase GII85_09670 PF09335 SNARE associated Golgi protein GII85_09680 PF01039 Carboxyl transferase domain GII85_09685 PF00378 Enoyl-CoA hydratase/isomerase GII85_09690 PF00682 HMGL-like GII85_09695 PF00364 Biotin-requiring enzyme GII85_09700 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain GII85_09700 PF00289 Biotin carboxylase, N-terminal domain GII85_09700 PF02785 Biotin carboxylase C-terminal domain GII85_09705 PF00501 AMP-binding enzyme GII85_09705 PF13193 AMP-binding enzyme C-terminal domain GII85_09710 PF02770 Acyl-CoA dehydrogenase, middle domain GII85_09710 PF00441 Acyl-CoA dehydrogenase, C-terminal domain GII85_09710 PF02771 Acyl-CoA dehydrogenase, N-terminal domain GII85_09715 PF17329 Family of unknown function (DUF5367) GII85_09720 PF02638 Glycosyl hydrolase-like 10 GII85_09725 PF07098 Protein of unknown function (DUF1360) GII85_09730 PF13193 AMP-binding enzyme C-terminal domain GII85_09730 PF00975 Thioesterase domain GII85_09730 PF00550 Phosphopantetheine attachment site GII85_09730 PF00501 AMP-binding enzyme GII85_09730 PF00668 Condensation domain GII85_09735 PF00501 AMP-binding enzyme GII85_09735 PF00550 Phosphopantetheine attachment site GII85_09735 PF00668 Condensation domain GII85_09735 PF13193 AMP-binding enzyme C-terminal domain GII85_09740 PF00668 Condensation domain GII85_09740 PF13193 AMP-binding enzyme C-terminal domain GII85_09740 PF00550 Phosphopantetheine attachment site GII85_09740 PF00501 AMP-binding enzyme GII85_09745 PF13193 AMP-binding enzyme C-terminal domain GII85_09745 PF00550 Phosphopantetheine attachment site GII85_09745 PF00501 AMP-binding enzyme GII85_09745 PF00668 Condensation domain GII85_09750 PF00501 AMP-binding enzyme GII85_09750 PF00550 Phosphopantetheine attachment site GII85_09750 PF00668 Condensation domain GII85_09750 PF13193 AMP-binding enzyme C-terminal domain GII85_09755 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family GII85_09760 PF01263 Aldose 1-epimerase GII85_09765 PF01554 MatE GII85_09770 PF16800 IseA DL-endopeptidase inhibitor GII85_09780 PF00589 Phage integrase family GII85_09785 PF12728 Helix-turn-helix domain GII85_09795 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GII85_09795 PF03466 LysR substrate binding domain GII85_09805 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster GII85_09805 PF07992 Pyridine nucleotide-disulphide oxidoreductase GII85_09810 PF00310 Glutamine amidotransferases class-II GII85_09810 PF04898 Glutamate synthase central domain GII85_09810 PF01493 GXGXG motif GII85_09810 PF01645 Conserved region in glutamate synthase GII85_09815 PF03466 LysR substrate binding domain GII85_09815 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GII85_09820 PF00696 Amino acid kinase family GII85_09820 PF01472 PUA domain GII85_09825 PF03807 NADP oxidoreductase coenzyme F420-dependent GII85_09825 PF14748 Pyrroline-5-carboxylate reductase dimerisation GII85_09830 PF02334 Replication terminator protein GII85_09835 PF00106 short chain dehydrogenase GII85_09840 PF06103 Bacterial protein of unknown function (DUF948) GII85_09850 PF13302 Acetyltransferase (GNAT) domain GII85_09865 PF00005 ABC transporter GII85_09875 PF07690 Major Facilitator Superfamily GII85_09880 PF02782 FGGY family of carbohydrate kinases, C-terminal domain GII85_09880 PF00370 FGGY family of carbohydrate kinases, N-terminal domain GII85_09885 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain GII85_09885 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GII85_09890 PF01568 Molydopterin dinucleotide binding domain GII85_09890 PF04879 Molybdopterin oxidoreductase Fe4S4 domain GII85_09890 PF00384 Molybdopterin oxidoreductase GII85_09900 PF00083 Sugar (and other) transporter GII85_09905 PF02894 Oxidoreductase family, C-terminal alpha/beta domain GII85_09905 PF01408 Oxidoreductase family, NAD-binding Rossmann fold GII85_09910 PF01261 Xylose isomerase-like TIM barrel GII85_09915 PF00356 Bacterial regulatory proteins, lacI family GII85_09930 PF13217 Protein of unknown function (DUF4025) GII85_09935 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GII85_09935 PF00672 HAMP domain GII85_09935 PF05227 CHASE3 domain GII85_09940 PF03241 4-hydroxyphenylacetate 3-hydroxylase C terminal GII85_09940 PF11794 4-hydroxyphenylacetate 3-hydroxylase N terminal GII85_09945 PF03330 Lytic transglycolase GII85_09950 PF06912 Protein of unknown function (DUF1275) GII85_09955 PF00544 Pectate lyase GII85_09960 PF02586 SOS response associated peptidase (SRAP) GII85_09970 PF00190 Cupin GII85_09975 PF16302 Domain of unknown function (DUF4944) GII85_09990 PF04294 VanW like protein GII85_09995 PF11188 Protein of unknown function (DUF2975) GII85_10005 PF05675 Protein of unknown function (DUF817) GII85_10010 PF03466 LysR substrate binding domain GII85_10010 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GII85_10015 PF00892 EamA-like transporter family GII85_10025 PF01965 DJ-1/PfpI family GII85_10035 PF11518 Protein of unknown function (DUF3221) GII85_10045 PF00391 PEP-utilising enzyme, mobile domain GII85_10045 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain GII85_10050 PF00457 Glycosyl hydrolases family 11 GII85_10055 PF05154 TM2 domain GII85_10080 PF13443 Cro/C1-type HTH DNA-binding domain GII85_10100 PF14037 YoqO-like protein GII85_10110 PF18801 response regulator aspartate phosphatase H, N terminal GII85_10120 PF00817 impB/mucB/samB family GII85_10120 PF11798 IMS family HHH motif GII85_10120 PF11799 impB/mucB/samB family C-terminal domain GII85_10130 PF09346 SMI1 / KNR4 family (SUKH-1) GII85_10135 PF01593 Flavin containing amine oxidoreductase GII85_10140 PF01588 Putative tRNA binding domain GII85_10145 PF07883 Cupin domain GII85_10145 PF12833 Helix-turn-helix domain GII85_10150 PF00583 Acetyltransferase (GNAT) family GII85_10155 PF00440 Bacterial regulatory proteins, tetR family GII85_10155 PF13305 Tetracyclin repressor-like, C-terminal domain GII85_10160 PF00753 Metallo-beta-lactamase superfamily GII85_10165 PF06445 GyrI-like small molecule binding domain GII85_10170 PF13280 WYL domain GII85_10170 PF08279 HTH domain GII85_10180 PF01022 Bacterial regulatory protein, arsR family GII85_10190 PF04238 Protein of unknown function (DUF420) GII85_10195 PF18846 Bacterial archaeo-eukaryotic release factor family 5 GII85_10205 PF17676 LD-carboxypeptidase C-terminal domain GII85_10205 PF02016 LD-carboxypeptidase N-terminal domain GII85_10210 PF00487 Fatty acid desaturase GII85_10215 PF07730 Histidine kinase GII85_10220 PF00196 Bacterial regulatory proteins, luxR family GII85_10220 PF00072 Response regulator receiver domain GII85_10225 PF06725 3D domain GII85_10225 PF01476 LysM domain GII85_10230 PF16124 RecQ zinc-binding GII85_10230 PF00270 DEAD/DEAH box helicase GII85_10230 PF09382 RQC domain GII85_10230 PF00570 HRDC domain GII85_10230 PF00271 Helicase conserved C-terminal domain GII85_10240 PF02525 Flavodoxin-like fold GII85_10245 PF01258 Prokaryotic dksA/traR C4-type zinc finger GII85_10260 PF00011 Hsp20/alpha crystallin family GII85_10275 PF08000 Bacterial PH domain GII85_10285 PF00171 Aldehyde dehydrogenase family GII85_10290 PF13249 Squalene-hopene cyclase N-terminal domain GII85_10290 PF13243 Squalene-hopene cyclase C-terminal domain GII85_10295 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain GII85_10295 PF02777 Iron/manganese superoxide dismutases, C-terminal domain GII85_10300 PF00209 Sodium:neurotransmitter symporter family GII85_10305 PF01758 Sodium Bile acid symporter family GII85_10310 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) GII85_10310 PF02817 e3 binding domain GII85_10310 PF00364 Biotin-requiring enzyme GII85_10315 PF16870 2-oxoglutarate dehydrogenase C-terminal GII85_10315 PF00676 Dehydrogenase E1 component GII85_10315 PF02779 Transketolase, pyrimidine binding domain GII85_10320 PF00092 von Willebrand factor type A domain GII85_10325 PF07728 AAA domain (dynein-related subfamily) GII85_10330 PF00080 Copper/zinc superoxide dismutase (SODC) GII85_10330 PF13627 Prokaryotic lipoprotein-attachment site GII85_10335 PF00877 NlpC/P60 family GII85_10335 PF01476 LysM domain GII85_10340 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase GII85_10345 PF10372 Bacterial membrane-spanning protein N-terminus GII85_10345 PF02457 DisA bacterial checkpoint controller nucleotide-binding GII85_10350 PF01554 MatE GII85_10355 PF01740 STAS domain GII85_10360 PF02585 GlcNAc-PI de-N-acetylase GII85_10365 PF08830 Protein of unknown function (DUF1806) GII85_10375 PF00892 EamA-like transporter family GII85_10390 PF02447 GntP family permease GII85_10395 PF14552 Tautomerase enzyme GII85_10400 PF01638 HxlR-like helix-turn-helix GII85_10405 PF00881 Nitroreductase family GII85_10410 PF01738 Dienelactone hydrolase family GII85_10415 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily GII85_10420 PF11755 Protein of unknown function (DUF3311) GII85_10425 PF00474 Sodium:solute symporter family GII85_10430 PF01471 Putative peptidoglycan binding domain GII85_10430 PF03572 Peptidase family S41 GII85_10430 PF17820 PDZ domain GII85_10435 PF08241 Methyltransferase domain GII85_10445 PF02557 D-alanyl-D-alanine carboxypeptidase GII85_10450 PF01048 Phosphorylase superfamily GII85_10460 PF14191 YodL-like GII85_10465 PF01569 PAP2 superfamily GII85_10470 PF14162 YozD-like protein GII85_10485 PF06855 YozE SAM-like fold GII85_10490 PF14122 YokU-like protein, putative antitoxin GII85_10495 PF12544 Lysine-2,3-aminomutase GII85_10500 PF00583 Acetyltransferase (GNAT) family GII85_10505 PF01546 Peptidase family M20/M25/M40 GII85_10505 PF07687 Peptidase dimerisation domain GII85_10510 PF01144 Coenzyme A transferase GII85_10515 PF01144 Coenzyme A transferase GII85_10520 PF00202 Aminotransferase class-III GII85_10535 PF00583 Acetyltransferase (GNAT) family GII85_10540 PF00535 Glycosyl transferase family 2 GII85_10555 PF12996 DUF based on E. rectale Gene description (DUF3880) GII85_10560 PF02333 Phytase GII85_10565 PF02719 Polysaccharide biosynthesis protein GII85_10570 PF01641 SelR domain GII85_10575 PF01625 Peptide methionine sulfoxide reductase GII85_10580 PF01047 MarR family GII85_10585 PF01554 MatE GII85_10590 PF17431 Uncharacterized YmpT-like GII85_10595 PF09911 Uncharacterized protein conserved in bacteria (DUF2140) GII85_10600 PF13472 GDSL-like Lipase/Acylhydrolase family GII85_10605 PF02630 SCO1/SenC GII85_10610 PF10751 Protein of unknown function (DUF2535) GII85_10615 PF00291 Pyridoxal-phosphate dependent enzyme GII85_10615 PF00585 C-terminal regulatory domain of Threonine dehydratase GII85_10620 PF08461 Ribonuclease R winged-helix domain GII85_10620 PF00158 Sigma-54 interaction domain GII85_10625 PF03006 Haemolysin-III related GII85_10635 PF00186 Dihydrofolate reductase GII85_10640 PF04608 Phosphatidylglycerophosphatase A GII85_10645 PF14005 YpjP-like protein GII85_10650 PF04445 Putative SAM-dependent methyltransferase GII85_10655 PF06491 Disulphide isomerase GII85_10660 PF00920 Dehydratase family GII85_10665 PF13769 Virulence factor GII85_10665 PF08712 Scaffold protein Nfu/NifU N terminal GII85_10670 PF01966 HD domain GII85_10675 PF00255 Glutathione peroxidase GII85_10680 PF04204 Homoserine O-succinyltransferase GII85_10685 PF06925 Monogalactosyldiacylglycerol (MGDG) synthase GII85_10685 PF00534 Glycosyl transferases group 1 GII85_10695 PF00313 'Cold-shock' DNA-binding domain GII85_10705 PF10819 Protein of unknown function (DUF2564) GII85_10710 PF10782 Zinc-finger GII85_10715 PF13456 Reverse transcriptase-like GII85_10720 PF02592 Putative vitamin uptake transporter GII85_10725 PF13456 Reverse transcriptase-like GII85_10735 PF01367 5'-3' exonuclease, C-terminal SAM fold GII85_10735 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain GII85_10745 PF10752 Protein of unknown function (DUF2533) GII85_10750 PF00350 Dynamin family GII85_10760 PF04140 Isoprenylcysteine carboxyl methyltransferase (ICMT) family GII85_10765 PF00195 Chalcone and stilbene synthases, N-terminal domain GII85_10765 PF02797 Chalcone and stilbene synthases, C-terminal domain GII85_10770 PF00860 Permease family GII85_10775 PF00156 Phosphoribosyl transferase domain GII85_10780 PF02074 Carboxypeptidase Taq (M32) metallopeptidase GII85_10785 PF03812 2-keto-3-deoxygluconate permease GII85_10790 PF01081 KDPG and KHG aldolase GII85_10795 PF00294 pfkB family carbohydrate kinase GII85_10800 PF00356 Bacterial regulatory proteins, lacI family GII85_10805 PF04962 KduI/IolB family GII85_10815 PF13307 Helicase C-terminal domain GII85_10825 PF14139 YpzG-like protein GII85_10830 PF02926 THUMP domain GII85_10830 PF01170 Putative RNA methylase family UPF0020 GII85_10840 PF05103 DivIVA protein GII85_10845 PF06908 YspA SLOG family GII85_10850 PF11122 Inner spore coat protein D GII85_10860 PF13482 RNase_H superfamily GII85_10865 PF09369 Domain of unknown function (DUF1998) GII85_10865 PF00271 Helicase conserved C-terminal domain GII85_10865 PF00270 DEAD/DEAH box helicase GII85_10870 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 GII85_10880 PF14179 YppG-like protein GII85_10885 PF14178 YppF-like protein GII85_10890 PF08807 Bacterial domain of unknown function (DUF1798) GII85_10895 PF17522 Family of unknown function (DUF5446) GII85_10905 PF10720 Protein of unknown function (DUF2515) GII85_10910 PF03838 Recombination protein U GII85_10915 PF00905 Penicillin binding protein transpeptidase domain GII85_10915 PF00912 Transglycosylase GII85_10925 PF00730 HhH-GPD superfamily base excision DNA repair protein GII85_10925 PF00633 Helix-hairpin-helix motif GII85_10925 PF10576 Iron-sulfur binding domain of endonuclease III GII85_10930 PF07261 Replication initiation and membrane attachment GII85_10935 PF00152 tRNA synthetases class II (D, K and N) GII85_10935 PF01336 OB-fold nucleic acid binding domain GII85_10940 PF00155 Aminotransferase class I and II GII85_10945 PF03413 Peptidase propeptide and YPEB domain GII85_10945 PF17881 Domain of unknown function (DUF5590) GII85_10950 PF14084 Protein of unknown function (DUF4264) GII85_10955 PF13307 Helicase C-terminal domain GII85_10955 PF00929 Exonuclease GII85_10955 PF04851 Type III restriction enzyme, res subunit GII85_10960 PF02261 Aspartate decarboxylase GII85_10965 PF02569 Pantoate-beta-alanine ligase GII85_10970 PF02548 Ketopantoate hydroxymethyltransferase GII85_10975 PF08279 HTH domain GII85_10975 PF03099 Biotin/lipoate A/B protein ligase family GII85_10975 PF02237 Biotin protein ligase C terminal domain GII85_10980 PF12627 Probable RNA and SrmB- binding site of polymerase A GII85_10980 PF13735 tRNA nucleotidyltransferase domain 2 putative GII85_10980 PF01743 Poly A polymerase head domain GII85_10985 PF00534 Glycosyl transferases group 1 GII85_10985 PF13439 Glycosyltransferase Family 4 GII85_10990 PF02585 GlcNAc-PI de-N-acetylase GII85_10995 PF02142 MGS-like domain GII85_11000 PF01113 Dihydrodipicolinate reductase, N-terminus GII85_11000 PF05173 Dihydrodipicolinate reductase, C-terminus GII85_11005 PF03819 MazG nucleotide pyrophosphohydrolase domain GII85_11010 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) GII85_11010 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 GII85_11015 PF09577 Sporulation protein YpjB (SpoYpjB) GII85_11020 PF07187 Protein of unknown function (DUF1405) GII85_11025 PF13442 Cytochrome C oxidase, cbb3-type, subunit III GII85_11025 PF00032 Cytochrome b(C-terminal)/b6/petD GII85_11030 PF00033 Cytochrome b/b6/petB GII85_11035 PF00355 Rieske [2Fe-2S] domain GII85_11040 PF10673 Protein of unknown function (DUF2487) GII85_11045 PF08864 UPF0302 domain GII85_11045 PF08858 IDEAL domain GII85_11055 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) GII85_11060 PF01842 ACT domain GII85_11060 PF02153 Prephenate dehydrogenase GII85_11065 PF00155 Aminotransferase class I and II GII85_11070 PF00290 Tryptophan synthase alpha chain GII85_11075 PF00291 Pyridoxal-phosphate dependent enzyme GII85_11080 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase GII85_11085 PF00218 Indole-3-glycerol phosphate synthase GII85_11090 PF00591 Glycosyl transferase family, a/b domain GII85_11090 PF02885 Glycosyl transferase family, helical bundle domain GII85_11095 PF04715 Anthranilate synthase component I, N terminal region GII85_11095 PF00425 chorismate binding enzyme GII85_11100 PF07736 Chorismate mutase type I GII85_11105 PF01761 3-dehydroquinate synthase GII85_11110 PF01264 Chorismate synthase GII85_11115 PF01739 CheR methyltransferase, SAM binding domain GII85_11115 PF03705 CheR methyltransferase, all-alpha domain GII85_11120 PF00334 Nucleoside diphosphate kinase GII85_11125 PF00348 Polyprenyl synthetase GII85_11130 PF01209 ubiE/COQ5 methyltransferase family GII85_11135 PF07307 Heptaprenyl diphosphate synthase (HEPPP synthase) subunit 1 GII85_11140 PF02081 Tryptophan RNA-binding attenuator protein GII85_11145 PF01227 GTP cyclohydrolase I GII85_11150 PF00216 Bacterial DNA-binding protein GII85_11155 PF09547 Stage IV sporulation protein A (spore_IV_A) GII85_11165 PF10966 Protein of unknown function (DUF2768) GII85_11170 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus GII85_11170 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus GII85_11175 PF01926 50S ribosome-binding GTPase GII85_11175 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal GII85_11185 PF14045 YIEGIA protein GII85_11195 PF14140 YpzI-like protein GII85_11200 PF01070 FMN-dependent dehydrogenase GII85_11205 PF00575 S1 RNA binding domain GII85_11210 PF02224 Cytidylate kinase GII85_11215 PF17313 Family of unknown function (DUF5359) GII85_11220 PF12945 Flagellar protein YcgR GII85_11220 PF07238 PilZ domain GII85_11225 PF03413 Peptidase propeptide and YPEB domain GII85_11225 PF14620 YpeB sporulation GII85_11230 PF01471 Putative peptidoglycan binding domain GII85_11230 PF07486 Cell Wall Hydrolase GII85_11235 PF13367 PrsW family intramembrane metalloprotease GII85_11245 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase GII85_11245 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain GII85_11250 PF05389 Negative regulator of genetic competence (MecA) GII85_11255 PF00149 Calcineurin-like phosphoesterase GII85_11260 PF10864 Protein of unknown function (DUF2663) GII85_11265 PF01476 LysM domain GII85_11270 PF02517 CPBP intramembrane metalloprotease GII85_11275 PF00270 DEAD/DEAH box helicase GII85_11275 PF00271 Helicase conserved C-terminal domain GII85_11280 PF14493 Helix-turn-helix domain GII85_11290 PF12822 ECF transporter, substrate-specific component GII85_11295 PF01842 ACT domain GII85_11295 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain GII85_11295 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GII85_11300 PF01487 Type I 3-dehydroquinase GII85_11310 PF04542 Sigma-70 region 2 GII85_11310 PF08281 Sigma-70, region 4 GII85_11315 PF18698 Histidine kinase sensor domain GII85_11315 PF00672 HAMP domain GII85_11315 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GII85_11315 PF00512 His Kinase A (phospho-acceptor) domain GII85_11315 PF00989 PAS fold GII85_11320 PF00486 Transcriptional regulatory protein, C terminal GII85_11320 PF00072 Response regulator receiver domain GII85_11325 PF01578 Cytochrome C assembly protein GII85_11330 PF05140 ResB-like family GII85_11335 PF00578 AhpC/TSA family GII85_11340 PF00849 RNA pseudouridylate synthase GII85_11340 PF01479 S4 domain GII85_11345 PF07670 Nucleoside recognition GII85_11350 PF07670 Nucleoside recognition GII85_11355 PF00768 D-alanyl-D-alanine carboxypeptidase GII85_11355 PF07943 Penicillin-binding protein 5, C-terminal domain GII85_11360 PF13047 Protein of unknown function (DUF3907) GII85_11365 PF04079 Segregation and condensation complex subunit ScpB GII85_11370 PF02616 Segregation and condensation protein ScpA GII85_11375 PF03745 Domain of unknown function (DUF309) GII85_11380 PF00583 Acetyltransferase (GNAT) family GII85_11385 PF00885 6,7-dimethyl-8-ribityllumazine synthase GII85_11390 PF00925 GTP cyclohydrolase II GII85_11390 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase GII85_11395 PF00677 Lumazine binding domain GII85_11400 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region GII85_11400 PF01872 RibD C-terminal domain GII85_11410 PF10502 Signal peptidase, peptidase S26 GII85_11420 PF10676 Spore germination protein gerPA/gerPF GII85_11425 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD GII85_11435 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD GII85_11470 PF02151 UvrB/uvrC motif GII85_11470 PF01541 GIY-YIG catalytic domain GII85_11470 PF08459 UvrC Helix-hairpin-helix N-terminal GII85_11475 PF06725 3D domain GII85_11520 PF01653 NAD-dependent DNA ligase adenylation domain GII85_11520 PF03120 NAD-dependent DNA ligase OB-fold domain GII85_11520 PF12826 Helix-hairpin-helix motif GII85_11520 PF00533 BRCA1 C Terminus (BRCT) domain GII85_11520 PF03119 NAD-dependent DNA ligase C4 zinc finger domain GII85_11535 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain GII85_11535 PF00476 DNA polymerase family A GII85_11535 PF01367 5'-3' exonuclease, C-terminal SAM fold GII85_11535 PF01612 3'-5' exonuclease GII85_11545 PF01712 Deoxynucleoside kinase GII85_11555 PF00265 Thymidine kinase GII85_11570 PF02075 Crossover junction endodeoxyribonuclease RuvC GII85_11630 PF01510 N-acetylmuramoyl-L-alanine amidase GII85_11630 PF01471 Putative peptidoglycan binding domain GII85_11635 PF05105 Bacteriophage holin family GII85_11730 PF02796 Helix-turn-helix domain of resolvase GII85_11730 PF00239 Resolvase, N terminal domain GII85_11775 PF15919 HicB_like antitoxin of bacterial toxin-antitoxin system GII85_11785 PF18801 response regulator aspartate phosphatase H, N terminal GII85_11785 PF17874 MalT-like TPR region GII85_11795 PF06207 Protein of unknown function (DUF1002) GII85_11800 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain GII85_11800 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain GII85_11805 PF03323 Bacillus/Clostridium GerA spore germination protein GII85_11810 PF14097 Stage V sporulation protein AE1 GII85_11815 PF03862 SpoVAC/SpoVAEB sporulation membrane protein GII85_11820 PF07451 Stage V sporulation protein AD (SpoVAD) GII85_11825 PF03862 SpoVAC/SpoVAEB sporulation membrane protein GII85_11830 PF13782 Stage V sporulation protein AB GII85_11835 PF12164 Stage V sporulation protein AA GII85_11840 PF04545 Sigma-70, region 4 GII85_11840 PF04539 Sigma-70 region 3 GII85_11840 PF04542 Sigma-70 region 2 GII85_11845 PF13581 Histidine kinase-like ATPase domain GII85_11850 PF01740 STAS domain GII85_11855 PF00768 D-alanyl-D-alanine carboxypeptidase GII85_11855 PF07943 Penicillin-binding protein 5, C-terminal domain GII85_11860 PF01048 Phosphorylase superfamily GII85_11865 PF01676 Metalloenzyme superfamily GII85_11870 PF02899 Phage integrase, N-terminal SAM-like domain GII85_11870 PF00589 Phage integrase family GII85_11875 PF14004 Protein of unknown function (DUF4227) GII85_11880 PF01475 Ferric uptake regulator family GII85_11885 PF01944 Stage II sporulation protein M GII85_11895 PF03949 Malic enzyme, NAD binding domain GII85_11895 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain GII85_11895 PF00390 Malic enzyme, N-terminal domain GII85_11900 PF03553 Na+/H+ antiporter family GII85_11905 PF00206 Lyase GII85_11905 PF10415 Fumarase C C-terminus GII85_11910 PF17763 Glutaminase/Asparaginase C-terminal domain GII85_11910 PF00710 Asparaginase, N-terminal GII85_11915 PF01381 Helix-turn-helix GII85_11925 PF00293 NUDIX domain GII85_11930 PF13072 Mother cell inhibitor of FtsZ GII85_11935 PF00248 Aldo/keto reductase family GII85_11940 PF13025 Protein of unknown function (DUF3886) GII85_11945 PF12146 Serine aminopeptidase, S33 GII85_11950 PF10827 Protein of unknown function (DUF2552) GII85_11955 PF01521 Iron-sulphur cluster biosynthesis GII85_11960 PF13673 Acetyltransferase (GNAT) domain GII85_11960 PF04229 GrpB protein GII85_11965 PF03992 Antibiotic biosynthesis monooxygenase GII85_11970 PF00583 Acetyltransferase (GNAT) family GII85_11975 PF08863 YolD-like protein GII85_11980 PF00817 impB/mucB/samB family GII85_11980 PF11799 impB/mucB/samB family C-terminal domain GII85_11985 PF14164 YqzH-like protein GII85_11990 PF07690 Major Facilitator Superfamily GII85_12000 PF00485 Phosphoribulokinase / Uridine kinase family GII85_12005 PF00291 Pyridoxal-phosphate dependent enzyme GII85_12010 PF00106 short chain dehydrogenase GII85_12015 PF00753 Metallo-beta-lactamase superfamily GII85_12020 PF14748 Pyrroline-5-carboxylate reductase dimerisation GII85_12020 PF03807 NADP oxidoreductase coenzyme F420-dependent GII85_12025 PF01546 Peptidase family M20/M25/M40 GII85_12030 PF00724 NADH:flavin oxidoreductase / NADH oxidase family GII85_12035 PF12146 Serine aminopeptidase, S33 GII85_12040 PF00471 Ribosomal protein L33 GII85_12045 PF12706 Beta-lactamase superfamily domain GII85_12050 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain GII85_12050 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain GII85_12055 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain GII85_12055 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase GII85_12060 PF00817 impB/mucB/samB family GII85_12060 PF11798 IMS family HHH motif GII85_12060 PF11799 impB/mucB/samB family C-terminal domain GII85_12070 PF02096 60Kd inner membrane protein GII85_12075 PF09844 Uncharacterized conserved protein (COG2071) GII85_12080 PF01546 Peptidase family M20/M25/M40 GII85_12080 PF07687 Peptidase dimerisation domain GII85_12085 PF01039 Carboxyl transferase domain GII85_12100 PF03734 L,D-transpeptidase catalytic domain GII85_12105 PF11728 Putative aromatic acid exporter C-terminal domain GII85_12105 PF06081 Aromatic acid exporter family member 1 GII85_12110 PF00005 ABC transporter GII85_12115 PF00528 Binding-protein-dependent transport system inner membrane component GII85_12120 PF00497 Bacterial extracellular solute-binding proteins, family 3 GII85_12125 PF06491 Disulphide isomerase GII85_12130 PF00781 Diacylglycerol kinase catalytic domain GII85_12135 PF07690 Major Facilitator Superfamily GII85_12140 PF06445 GyrI-like small molecule binding domain GII85_12140 PF13411 MerR HTH family regulatory protein GII85_12145 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) GII85_12145 PF02817 e3 binding domain GII85_12145 PF00364 Biotin-requiring enzyme GII85_12150 PF02779 Transketolase, pyrimidine binding domain GII85_12150 PF02780 Transketolase, C-terminal domain GII85_12155 PF00676 Dehydrogenase E1 component GII85_12160 PF07992 Pyridine nucleotide-disulphide oxidoreductase GII85_12160 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GII85_12165 PF00871 Acetokinase family GII85_12170 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase GII85_12170 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain GII85_12175 PF01515 Phosphate acetyl/butaryl transferase GII85_12180 PF00158 Sigma-54 interaction domain GII85_12180 PF02954 Bacterial regulatory protein, Fis family GII85_12180 PF00989 PAS fold GII85_12185 PF11118 Protein of unknown function (DUF2627) GII85_12195 PF03972 MmgE/PrpD family GII85_12200 PF00285 Citrate synthase, C-terminal domain GII85_12205 PF02771 Acyl-CoA dehydrogenase, N-terminal domain GII85_12205 PF02770 Acyl-CoA dehydrogenase, middle domain GII85_12205 PF00441 Acyl-CoA dehydrogenase, C-terminal domain GII85_12210 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain GII85_12210 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain GII85_12215 PF00108 Thiolase, N-terminal domain GII85_12215 PF02803 Thiolase, C-terminal domain GII85_12220 PF03009 Glycerophosphoryl diester phosphodiesterase family GII85_12225 PF01520 N-acetylmuramoyl-L-alanine amidase GII85_12240 PF00724 NADH:flavin oxidoreductase / NADH oxidase family GII85_12245 PF08769 Sporulation initiation factor Spo0A C terminal GII85_12245 PF00072 Response regulator receiver domain GII85_12250 PF17820 PDZ domain GII85_12250 PF05580 SpoIVB peptidase S55 GII85_12255 PF13476 AAA domain GII85_12260 PF02863 Arginine repressor, C-terminal domain GII85_12260 PF01316 Arginine repressor, DNA binding domain GII85_12265 PF01728 FtsJ-like methyltransferase GII85_12265 PF01479 S4 domain GII85_12270 PF02779 Transketolase, pyrimidine binding domain GII85_12270 PF13292 1-deoxy-D-xylulose-5-phosphate synthase GII85_12270 PF02780 Transketolase, C-terminal domain GII85_12275 PF00348 Polyprenyl synthetase GII85_12280 PF02609 Exonuclease VII small subunit GII85_12285 PF13742 OB-fold nucleic acid binding domain GII85_12285 PF02601 Exonuclease VII, large subunit GII85_12290 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain GII85_12290 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain GII85_12295 PF01029 NusB family GII85_12300 PF03780 Asp23 family, cell envelope-related function GII85_12305 PF02785 Biotin carboxylase C-terminal domain GII85_12305 PF00289 Biotin carboxylase, N-terminal domain GII85_12305 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain GII85_12310 PF00364 Biotin-requiring enzyme GII85_12315 PF12685 SpoIIIAH-like protein GII85_12325 PF09581 Stage III sporulation protein AF (Spore_III_AF) GII85_12330 PF09546 Stage III sporulation protein AE (spore_III_AE) GII85_12335 PF06686 Stage III sporulation protein AC/AD protein family GII85_12340 PF06686 Stage III sporulation protein AC/AD protein family GII85_12345 PF09548 Stage III sporulation protein AB (spore_III_AB) GII85_12355 PF10942 Protein of unknown function (DUF2619) GII85_12360 PF08207 Elongation factor P (EF-P) KOW-like domain GII85_12360 PF01132 Elongation factor P (EF-P) OB domain GII85_12360 PF09285 Elongation factor P, C-terminal GII85_12365 PF01321 Creatinase/Prolidase N-terminal domain GII85_12365 PF00557 Metallopeptidase family M24 GII85_12370 PF01220 Dehydroquinase class II GII85_12375 PF11085 Conserved membrane protein YqhR GII85_12380 PF07136 Protein of unknown function (DUF1385) GII85_12390 PF01734 Patatin-like phospholipase GII85_12395 PF01325 Iron dependent repressor, N-terminal DNA binding domain GII85_12395 PF02742 Iron dependent repressor, metal binding and dimerisation domain GII85_12400 PF03099 Biotin/lipoate A/B protein ligase family GII85_12405 PF00581 Rhodanese-like domain GII85_12410 PF02347 Glycine cleavage system P-protein GII85_12415 PF02347 Glycine cleavage system P-protein GII85_12420 PF01571 Aminomethyltransferase folate-binding domain GII85_12420 PF08669 Glycine cleavage T-protein C-terminal barrel domain GII85_12425 PF00176 SNF2 family N-terminal domain GII85_12425 PF00271 Helicase conserved C-terminal domain GII85_12430 PF11079 Bacterial protein YqhG of unknown function GII85_12435 PF08671 Anti-repressor SinI GII85_12440 PF08671 Anti-repressor SinI GII85_12440 PF01381 Helix-turn-helix GII85_12445 PF12389 Camelysin metallo-endopeptidase GII85_12460 PF13028 Protein of unknown function (DUF3889) GII85_12465 PF14038 YqzE-like protein GII85_12470 PF14173 ComG operon protein 7 GII85_12475 PF15980 Putative Competence protein ComGF GII85_12485 PF07963 Prokaryotic N-terminal methylation motif GII85_12490 PF07963 Prokaryotic N-terminal methylation motif GII85_12495 PF00482 Type II secretion system (T2SS), protein F GII85_12500 PF00437 Type II/IV secretion system protein GII85_12505 PF01544 CorA-like Mg2+ transporter protein GII85_12510 PF01595 Cyclin M transmembrane N-terminal domain GII85_12510 PF03471 Transporter associated domain GII85_12510 PF00571 CBS domain GII85_12515 PF01740 STAS domain GII85_12515 PF14361 RsbT co-antagonist protein rsbRD N-terminal domain GII85_12525 PF03960 ArsC family GII85_12530 PF11117 Protein of unknown function (DUF2626) GII85_12535 PF00753 Metallo-beta-lactamase superfamily GII85_12540 PF10958 Protein of unknown function (DUF2759) GII85_12545 PF01910 Thiamine-binding protein GII85_12555 PF00246 Zinc carboxypeptidase GII85_12560 PF00884 Sulfatase GII85_12565 PF00480 ROK family GII85_12570 PF06014 Bacterial protein of unknown function (DUF910) GII85_12575 PF01694 Rhomboid family GII85_12585 PF01812 5-formyltetrahydrofolate cyclo-ligase family GII85_12590 PF00471 Ribosomal protein L33 GII85_12595 PF13439 Glycosyltransferase Family 4 GII85_12595 PF00534 Glycosyl transferases group 1 GII85_12615 PF00005 ABC transporter GII85_12620 PF00005 ABC transporter GII85_12625 PF00528 Binding-protein-dependent transport system inner membrane component GII85_12630 PF00528 Binding-protein-dependent transport system inner membrane component GII85_12635 PF12849 PBP superfamily domain GII85_12645 PF07690 Major Facilitator Superfamily GII85_12650 PF02777 Iron/manganese superoxide dismutases, C-terminal domain GII85_12650 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain GII85_12655 PF04306 Protein of unknown function (DUF456) GII85_12660 PF06691 Protein of unknown function (DUF1189) GII85_12670 PF04551 GcpE protein GII85_12685 PF01475 Ferric uptake regulator family GII85_12690 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) GII85_12690 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 GII85_12695 PF11116 Protein of unknown function (DUF2624) GII85_12700 PF01261 Xylose isomerase-like TIM barrel GII85_12705 PF00270 DEAD/DEAH box helicase GII85_12705 PF00271 Helicase conserved C-terminal domain GII85_12710 PF14181 YqfQ-like protein GII85_12715 PF02401 LytB protein GII85_12720 PF01784 NIF3 (NGG1p interacting factor 3) GII85_12725 PF04816 tRNA (adenine(22)-N(1))-methyltransferase GII85_12730 PF13442 Cytochrome C oxidase, cbb3-type, subunit III GII85_12735 PF04542 Sigma-70 region 2 GII85_12735 PF04545 Sigma-70, region 4 GII85_12735 PF00140 Sigma-70 factor, region 1.2 GII85_12735 PF04539 Sigma-70 region 3 GII85_12735 PF03979 Sigma-70 factor, region 1.1 GII85_12740 PF01807 CHC2 zinc finger GII85_12740 PF08275 DNA primase catalytic core, N-terminal domain GII85_12740 PF10410 DnaB-helicase binding domain of primase GII85_12745 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 GII85_12750 PF03618 Kinase/pyrophosphorylase GII85_12755 PF00571 CBS domain GII85_12755 PF08279 HTH domain GII85_12760 PF02092 Glycyl-tRNA synthetase beta subunit GII85_12765 PF02091 Glycyl-tRNA synthetase alpha subunit GII85_12770 PF11967 Recombination protein O N terminal GII85_12770 PF02565 Recombination protein O C terminal GII85_12775 PF14006 YqzL-like protein GII85_12780 PF01926 50S ribosome-binding GTPase GII85_12780 PF07650 KH domain GII85_12785 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region GII85_12790 PF01219 Prokaryotic diacylglycerol kinase GII85_12795 PF02130 Uncharacterized protein family UPF0054 GII85_12800 PF01966 HD domain GII85_12800 PF07697 7TM-HD extracellular GII85_12800 PF07698 7TM receptor with intracellular HD hydrolase GII85_12805 PF02562 PhoH-like protein GII85_12810 PF06898 Putative stage IV sporulation protein YqfD GII85_12815 PF07873 YabP family GII85_12825 PF12127 SigmaW regulon antibacterial GII85_12830 PF01972 Serine dehydrogenase proteinase GII85_12830 PF01957 NfeD-like C-terminal, partner-binding GII85_12835 PF09424 Yqey-like protein GII85_12840 PF01165 Ribosomal protein S21 GII85_12845 PF02690 Na+/Pi-cotransporter GII85_12850 PF04055 Radical SAM superfamily GII85_12850 PF00919 Uncharacterized protein family UPF0004 GII85_12850 PF01938 TRAM domain GII85_12855 PF04452 RNA methyltransferase GII85_12865 PF00684 DnaJ central domain GII85_12865 PF01556 DnaJ C terminal domain GII85_12865 PF00226 DnaJ domain GII85_12870 PF00012 Hsp70 protein GII85_12875 PF01025 GrpE GII85_12880 PF01628 HrcA protein C terminal domain GII85_12885 PF06969 HemN C-terminal domain GII85_12885 PF04055 Radical SAM superfamily GII85_12890 PF06421 GTP-binding protein LepA C-terminus GII85_12890 PF00009 Elongation factor Tu GTP binding domain GII85_12890 PF00679 Elongation factor G C-terminus GII85_12890 PF03144 Elongation factor Tu domain 2 GII85_12895 PF12438 Protein of unknown function (DUF3679) GII85_12900 PF07454 Stage II sporulation protein P (SpoIIP) GII85_12905 PF03418 Germination protease GII85_12910 PF01649 Ribosomal protein S20 GII85_12915 PF06144 DNA polymerase III, delta subunit GII85_12925 PF14141 YqzM-like protein GII85_12930 PF00753 Metallo-beta-lactamase superfamily GII85_12930 PF13567 Domain of unknown function (DUF4131) GII85_12930 PF03772 Competence protein GII85_12935 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region GII85_12940 PF10531 SLBB domain GII85_12945 PF14748 Pyrroline-5-carboxylate reductase dimerisation GII85_12945 PF03807 NADP oxidoreductase coenzyme F420-dependent GII85_12950 PF13649 Methyltransferase domain GII85_12960 PF01966 HD domain GII85_12965 PF01467 Cytidylyltransferase-like GII85_12970 PF01985 CRS1 / YhbY (CRM) domain GII85_12975 PF01488 Shikimate / quinate 5-dehydrogenase GII85_12975 PF18317 Shikimate 5'-dehydrogenase C-terminal domain GII85_12975 PF08501 Shikimate dehydrogenase substrate binding domain GII85_12980 PF01926 50S ribosome-binding GTPase GII85_12990 PF08970 Sporulation inhibitor A GII85_12995 PF00657 GDSL-like Lipase/Acylhydrolase GII85_13000 PF01471 Putative peptidoglycan binding domain GII85_13000 PF01510 N-acetylmuramoyl-L-alanine amidase GII85_13005 PF09335 SNARE associated Golgi protein GII85_13010 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase GII85_13010 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain GII85_13020 PF14040 Deoxyribonuclease NucA/NucB GII85_13025 PF04542 Sigma-70 region 2 GII85_13025 PF04545 Sigma-70, region 4 GII85_13035 PF07508 Recombinase GII85_13035 PF13408 Recombinase zinc beta ribbon domain GII85_13035 PF00239 Resolvase, N terminal domain GII85_13045 PF06146 Phosphate-starvation-inducible E GII85_13050 PF00512 His Kinase A (phospho-acceptor) domain GII85_13055 PF00072 Response regulator receiver domain GII85_13055 PF00486 Transcriptional regulatory protein, C terminal GII85_13060 PF04235 Protein of unknown function (DUF418) GII85_13070 PF00583 Acetyltransferase (GNAT) family GII85_13075 PF02525 Flavodoxin-like fold GII85_13080 PF13787 Protein of unknown function with HXXEE motif GII85_13085 PF01925 Sulfite exporter TauE/SafE GII85_13090 PF01206 Sulfurtransferase TusA GII85_13095 PF00581 Rhodanese-like domain GII85_13095 PF00753 Metallo-beta-lactamase superfamily GII85_13105 PF00581 Rhodanese-like domain GII85_13105 PF01206 Sulfurtransferase TusA GII85_13110 PF13686 DsrE/DsrF/DrsH-like family GII85_13115 PF02583 Metal-sensitive transcriptional repressor GII85_13120 PF07883 Cupin domain GII85_13130 PF13411 MerR HTH family regulatory protein GII85_13130 PF06445 GyrI-like small molecule binding domain GII85_13135 PF07690 Major Facilitator Superfamily GII85_13140 PF00583 Acetyltransferase (GNAT) family GII85_13145 PF01595 Cyclin M transmembrane N-terminal domain GII85_13145 PF03471 Transporter associated domain GII85_13145 PF00571 CBS domain GII85_13150 PF14142 YrzO-like protein GII85_13155 PF00892 EamA-like transporter family GII85_13160 PF03466 LysR substrate binding domain GII85_13160 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GII85_13170 PF01545 Cation efflux family GII85_13170 PF16916 Dimerisation domain of Zinc Transporter GII85_13180 PF05525 Branched-chain amino acid transport protein GII85_13185 PF05437 Branched-chain amino acid transport protein (AzlD) GII85_13190 PF03591 AzlC protein GII85_13195 PF01037 Lrp/AsnC ligand binding domain GII85_13200 PF01337 Barstar (barnase inhibitor) GII85_13205 PF00067 Cytochrome P450 GII85_13215 PF00857 Isochorismatase family GII85_13220 PF10823 Protein of unknown function (DUF2568) GII85_13230 PF05163 DinB family GII85_13235 PF04439 Streptomycin adenylyltransferase GII85_13240 PF03060 Nitronate monooxygenase GII85_13245 PF01177 Asp/Glu/Hydantoin racemase GII85_13250 PF15493 Domain of unknown function, YrpD GII85_13255 PF00392 Bacterial regulatory proteins, gntR family GII85_13255 PF07729 FCD domain GII85_13265 PF07690 Major Facilitator Superfamily GII85_13275 PF02780 Transketolase, C-terminal domain GII85_13275 PF02779 Transketolase, pyrimidine binding domain GII85_13280 PF00456 Transketolase, thiamine diphosphate binding domain GII85_13280 PF02780 Transketolase, C-terminal domain GII85_13280 PF02779 Transketolase, pyrimidine binding domain GII85_13285 PF07690 Major Facilitator Superfamily GII85_13290 PF01047 MarR family GII85_13295 PF09223 ZinT (YodA) periplasmic lipocalin-like zinc-recruitment GII85_13300 PF08281 Sigma-70, region 4 GII85_13300 PF04542 Sigma-70 region 2 GII85_13305 PF00248 Aldo/keto reductase family GII85_13310 PF01374 Glycosyl hydrolase family 46 GII85_13320 PF00561 alpha/beta hydrolase fold GII85_13340 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily GII85_13350 PF07875 Coat F domain GII85_13355 PF08240 Alcohol dehydrogenase GroES-like domain GII85_13355 PF13823 Alcohol dehydrogenase GroES-associated GII85_13355 PF00107 Zinc-binding dehydrogenase GII85_13365 PF07875 Coat F domain GII85_13370 PF13411 MerR HTH family regulatory protein GII85_13380 PF08240 Alcohol dehydrogenase GroES-like domain GII85_13380 PF00107 Zinc-binding dehydrogenase GII85_13385 PF01965 DJ-1/PfpI family GII85_13390 PF08244 Glycosyl hydrolases family 32 C terminal GII85_13390 PF00251 Glycosyl hydrolases family 32 N-terminal domain GII85_13395 PF03613 PTS system mannose/fructose/sorbose family IID component GII85_13400 PF03609 PTS system sorbose-specific iic component GII85_13405 PF03830 PTS system sorbose subfamily IIB component GII85_13410 PF03610 PTS system fructose IIA component GII85_13415 PF00158 Sigma-54 interaction domain GII85_13415 PF00874 PRD domain GII85_13415 PF03610 PTS system fructose IIA component GII85_13425 PF00324 Amino acid permease GII85_13430 PF01810 LysE type translocator GII85_13435 PF11495 Archaeal transcriptional regulator TrmB GII85_13435 PF01978 Sugar-specific transcriptional regulator TrmB GII85_13440 PF08281 Sigma-70, region 4 GII85_13440 PF04542 Sigma-70 region 2 GII85_13445 PF13739 Deacetylase PdaC GII85_13445 PF11738 Protein of unknown function (DUF3298) GII85_13450 PF01757 Acyltransferase family GII85_13455 PF14145 YrhK-like protein GII85_13460 PF00067 Cytochrome P450 GII85_13460 PF00175 Oxidoreductase NAD-binding domain GII85_13460 PF00667 FAD binding domain GII85_13460 PF00258 Flavodoxin GII85_13465 PF00440 Bacterial regulatory proteins, tetR family GII85_13465 PF16295 Tetracyclin repressor-like, C-terminal domain GII85_13470 PF08241 Methyltransferase domain GII85_13480 PF09501 Probable sporulation protein (Bac_small_yrzI) GII85_13485 PF01226 Formate/nitrite transporter GII85_13490 PF10057 Uncharacterized conserved protein (DUF2294) GII85_13495 PF00037 4Fe-4S binding domain GII85_13495 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region GII85_13495 PF01568 Molydopterin dinucleotide binding domain GII85_13495 PF00384 Molybdopterin oxidoreductase GII85_13495 PF04879 Molybdopterin oxidoreductase Fe4S4 domain GII85_13500 PF07849 Protein of unknown function (DUF1641) GII85_13505 PF14143 YrhC-like protein GII85_13510 PF01053 Cys/Met metabolism PLP-dependent enzyme GII85_13515 PF00291 Pyridoxal-phosphate dependent enzyme GII85_13520 PF01048 Phosphorylase superfamily GII85_13525 PF13649 Methyltransferase domain GII85_13530 PF10750 Protein of unknown function (DUF2536) GII85_13535 PF07423 Domain of unknown function (DUF1510) GII85_13540 PF03717 Penicillin-binding Protein dimerisation domain GII85_13540 PF00905 Penicillin binding protein transpeptidase domain GII85_13545 PF01272 Transcription elongation factor, GreA/GreB, C-term GII85_13545 PF03449 Transcription elongation factor, N-terminal GII85_13550 PF00485 Phosphoribulokinase / Uridine kinase family GII85_13570 PF02618 YceG-like family GII85_13575 PF06949 Protein of unknown function (DUF1292) GII85_13580 PF03652 Holliday junction resolvase GII85_13585 PF06135 IreB regulatory phosphoprotein GII85_13590 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain GII85_13590 PF01411 tRNA synthetases class II (A) GII85_13590 PF02272 DHHA1 domain GII85_13595 PF01594 AI-2E family transporter GII85_13600 PF00005 ABC transporter GII85_13605 PF00497 Bacterial extracellular solute-binding proteins, family 3 GII85_13610 PF00528 Binding-protein-dependent transport system inner membrane component GII85_13615 PF00528 Binding-protein-dependent transport system inner membrane component GII85_13620 PF13056 Protein of unknown function (DUF3918) GII85_13630 PF05239 PRC-barrel domain GII85_13635 PF14490 Helix-hairpin-helix containing domain GII85_13635 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain GII85_13635 PF13538 UvrD-like helicase C-terminal domain GII85_13640 PF13181 Tetratricopeptide repeat GII85_13640 PF07719 Tetratricopeptide repeat GII85_13650 PF00266 Aminotransferase class-V GII85_13655 PF02082 Transcriptional regulator GII85_13660 PF12002 MgsA AAA+ ATPase C terminal GII85_13660 PF16193 AAA C-terminal domain GII85_13660 PF05496 Holliday junction DNA helicase RuvB P-loop domain GII85_13665 PF00899 ThiF family GII85_13675 PF00152 tRNA synthetases class II (D, K and N) GII85_13675 PF02938 GAD domain GII85_13675 PF01336 OB-fold nucleic acid binding domain GII85_13680 PF03129 Anticodon binding domain GII85_13680 PF13393 Histidyl-tRNA synthetase GII85_13685 PF17449 Uncharacterized YrzK-like GII85_13690 PF08239 Bacterial SH3 domain GII85_13690 PF01520 N-acetylmuramoyl-L-alanine amidase GII85_13695 PF02580 D-Tyr-tRNA(Tyr) deacylase GII85_13700 PF02824 TGS domain GII85_13700 PF04607 Region found in RelA / SpoT proteins GII85_13700 PF13291 ACT domain GII85_13705 PF00156 Phosphoribosyl transferase domain GII85_13710 PF17768 RecJ OB domain GII85_13710 PF10141 Single-strand DNA-specific exonuclease, C terminal domain GII85_13710 PF01368 DHH family GII85_13710 PF02272 DHHA1 domain GII85_13715 PF06305 Lipopolysaccharide assembly protein A domain GII85_13720 PF02080 TrkA-C domain GII85_13725 PF07549 SecD/SecF GG Motif GII85_13725 PF02355 Protein export membrane protein GII85_13730 PF13797 Post-transcriptional regulator GII85_13735 PF14667 Polysaccharide biosynthesis C-terminal domain GII85_13735 PF01943 Polysaccharide biosynthesis protein GII85_13740 PF04239 Protein of unknown function (DUF421) GII85_13745 PF12670 Protein of unknown function (DUF3792) GII85_13750 PF02699 Preprotein translocase subunit GII85_13755 PF01702 Queuine tRNA-ribosyltransferase GII85_13760 PF02547 Queuosine biosynthesis protein GII85_13765 PF11146 Protein of unknown function (DUF2905) GII85_13770 PF05491 RuvB C-terminal winged helix domain GII85_13770 PF05496 Holliday junction DNA helicase RuvB P-loop domain GII85_13770 PF17864 RuvB AAA lid domain GII85_13775 PF01330 RuvA N terminal domain GII85_13775 PF07499 RuvA, C-terminal domain GII85_13780 PF08955 BofC C-terminal domain GII85_13780 PF08977 Bypass of Forespore C, N terminal GII85_13785 PF07690 Major Facilitator Superfamily GII85_13790 PF01408 Oxidoreductase family, NAD-binding Rossmann fold GII85_13790 PF02894 Oxidoreductase family, C-terminal alpha/beta domain GII85_13815 PF01235 Sodium:alanine symporter family GII85_13820 PF01709 Transcriptional regulator GII85_13825 PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) GII85_13830 PF01476 LysM domain GII85_13835 PF02445 Quinolinate synthetase A protein GII85_13840 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain GII85_13840 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain GII85_13845 PF00890 FAD binding domain GII85_13845 PF02910 Fumarate reductase flavoprotein C-term GII85_13850 PF00266 Aminotransferase class-V GII85_13855 PF02829 3H domain GII85_13855 PF08279 HTH domain GII85_13860 PF00800 Prephenate dehydratase GII85_13860 PF01842 ACT domain GII85_13865 PF01842 ACT domain GII85_13870 PF09269 Domain of unknown function (DUF1967) GII85_13870 PF01018 GTP1/OBG GII85_13870 PF01926 50S ribosome-binding GTPase GII85_13875 PF14682 Sporulation initiation phospho-transferase B, C-terminal GII85_13875 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain GII85_13885 PF01016 Ribosomal L27 protein GII85_13890 PF04327 Cysteine protease Prp GII85_13895 PF00829 Ribosomal prokaryotic L21 protein GII85_13900 PF02163 Peptidase family M50 GII85_13905 PF01551 Peptidase family M23 GII85_13910 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain GII85_13915 PF03775 Septum formation inhibitor MinC, C-terminal domain GII85_13920 PF04093 rod shape-determining protein MreD GII85_13925 PF04085 rod shape-determining protein MreC GII85_13935 PF00633 Helix-hairpin-helix motif GII85_13935 PF04002 RadC-like JAB domain GII85_13940 PF02545 Maf-like protein GII85_13945 PF05036 Sporulation related domain GII85_13950 PF01478 Type IV leader peptidase family GII85_13950 PF06750 Bacterial Peptidase A24 N-terminal domain GII85_13955 PF08245 Mur ligase middle domain GII85_13955 PF02875 Mur ligase family, glutamate ligase domain GII85_13960 PF10458 Valyl tRNA synthetase tRNA binding arm GII85_13960 PF08264 Anticodon-binding domain of tRNA GII85_13960 PF00133 tRNA synthetases class I (I, L, M and V) GII85_13975 PF01476 LysM domain GII85_13980 PF00202 Aminotransferase class-III GII85_13985 PF00490 Delta-aminolevulinic acid dehydratase GII85_13990 PF02602 Uroporphyrinogen-III synthase HemD GII85_13995 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain GII85_13995 PF03900 Porphobilinogen deaminase, C-terminal domain GII85_14000 PF01578 Cytochrome C assembly protein GII85_14005 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain GII85_14005 PF01488 Shikimate / quinate 5-dehydrogenase GII85_14005 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain GII85_14015 PF01926 50S ribosome-binding GTPase GII85_14020 PF00004 ATPase family associated with various cellular activities (AAA) GII85_14020 PF05362 Lon protease (S16) C-terminal proteolytic domain GII85_14020 PF02190 ATP-dependent protease La (LON) substrate-binding domain GII85_14025 PF05362 Lon protease (S16) C-terminal proteolytic domain GII85_14025 PF00004 ATPase family associated with various cellular activities (AAA) GII85_14030 PF06689 ClpX C4-type zinc finger GII85_14030 PF10431 C-terminal, D2-small domain, of ClpB protein GII85_14030 PF07724 AAA domain (Cdc48 subfamily) GII85_14035 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase GII85_14035 PF05698 Bacterial trigger factor protein (TF) C-terminus GII85_14035 PF05697 Bacterial trigger factor protein (TF) GII85_14045 PF00694 Aconitase C-terminal domain GII85_14050 PF00330 Aconitase family (aconitate hydratase) GII85_14055 PF00180 Isocitrate/isopropylmalate dehydrogenase GII85_14060 PF00682 HMGL-like GII85_14060 PF08502 LeuA allosteric (dimerisation) domain GII85_14065 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain GII85_14065 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain GII85_14070 PF10369 Small subunit of acetolactate synthase GII85_14070 PF01842 ACT domain GII85_14075 PF00205 Thiamine pyrophosphate enzyme, central domain GII85_14075 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain GII85_14075 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain GII85_14085 PF00583 Acetyltransferase (GNAT) family GII85_14090 PF11181 Heat induced stress protein YflT GII85_14090 PF09557 Domain of unknown function (DUF2382) GII85_14100 PF12850 Calcineurin-like phosphoesterase superfamily domain GII85_14105 PF01725 Ham1 family GII85_14110 PF01138 3' exoribonuclease family, domain 1 GII85_14110 PF03725 3' exoribonuclease family, domain 2 GII85_14115 PF10646 Sporulation and spore germination GII85_14120 PF01177 Asp/Glu/Hydantoin racemase GII85_14125 PF01047 MarR family GII85_14130 PF00196 Bacterial regulatory proteins, luxR family GII85_14135 PF03061 Thioesterase superfamily GII85_14140 PF13085 2Fe-2S iron-sulfur cluster binding domain GII85_14140 PF13183 4Fe-4S dicluster domain GII85_14145 PF00890 FAD binding domain GII85_14145 PF02910 Fumarate reductase flavoprotein C-term GII85_14150 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit GII85_14155 PF10702 Protein of unknown function (DUF2507) GII85_14160 PF01842 ACT domain GII85_14160 PF00696 Amino acid kinase family GII85_14160 PF13840 ACT domain GII85_14165 PF08459 UvrC Helix-hairpin-helix N-terminal GII85_14165 PF01541 GIY-YIG catalytic domain GII85_14165 PF02151 UvrB/uvrC motif GII85_14170 PF00085 Thioredoxin GII85_14175 PF06964 Alpha-L-arabinofuranosidase C-terminal domain GII85_14180 PF00766 Electron transfer flavoprotein FAD-binding domain GII85_14180 PF01012 Electron transfer flavoprotein domain GII85_14185 PF01012 Electron transfer flavoprotein domain GII85_14190 PF00378 Enoyl-CoA hydratase/isomerase GII85_14195 PF08359 YsiA-like protein, C-terminal region GII85_14195 PF00440 Bacterial regulatory proteins, tetR family GII85_14200 PF13193 AMP-binding enzyme C-terminal domain GII85_14200 PF00501 AMP-binding enzyme GII85_14205 PF03994 Domain of Unknown Function (DUF350) GII85_14210 PF00488 MutS domain V GII85_14210 PF01713 Smr domain GII85_14215 PF02811 PHP domain GII85_14215 PF14791 DNA polymerase beta thumb GII85_14215 PF14716 Helix-hairpin-helix domain GII85_14220 PF02674 Colicin V production protein GII85_14225 PF05164 Cell division protein ZapA GII85_14230 PF01351 Ribonuclease HII GII85_14230 PF11858 Domain of unknown function (DUF3378) GII85_14235 PF03483 B3/4 domain GII85_14235 PF01588 Putative tRNA binding domain GII85_14235 PF03484 tRNA synthetase B5 domain GII85_14235 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain GII85_14235 PF03147 Ferredoxin-fold anticodon binding domain GII85_14240 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain GII85_14240 PF01409 tRNA synthetases class II core domain (F) GII85_14250 PF08032 RNA 2'-O ribose methyltransferase substrate binding GII85_14250 PF00588 SpoU rRNA Methylase family GII85_14255 PF14098 Small, acid-soluble spore protein I GII85_14260 PF13556 PucR C-terminal helix-turn-helix domain GII85_14260 PF17853 GGDEF-like domain GII85_14260 PF05651 Putative sugar diacid recognition GII85_14265 PF02913 FAD linked oxidases, C-terminal domain GII85_14265 PF01565 FAD binding domain GII85_14270 PF13183 4Fe-4S dicluster domain GII85_14270 PF02754 Cysteine-rich domain GII85_14275 PF12681 Glyoxalase-like domain GII85_14285 PF13722 5TM C-terminal transporter carbon starvation CstA GII85_14285 PF02554 Carbon starvation protein CstA GII85_14290 PF06964 Alpha-L-arabinofuranosidase C-terminal domain GII85_14295 PF00528 Binding-protein-dependent transport system inner membrane component GII85_14300 PF00528 Binding-protein-dependent transport system inner membrane component GII85_14305 PF01547 Bacterial extracellular solute-binding protein GII85_14310 PF13685 Iron-containing alcohol dehydrogenase GII85_14315 PF13344 Haloacid dehalogenase-like hydrolase GII85_14320 PF00596 Class II Aldolase and Adducin N-terminal domain GII85_14325 PF00370 FGGY family of carbohydrate kinases, N-terminal domain GII85_14325 PF02782 FGGY family of carbohydrate kinases, C-terminal domain GII85_14330 PF11762 L-arabinose isomerase C-terminal domain GII85_14330 PF02610 L-arabinose isomerase GII85_14335 PF04616 Glycosyl hydrolases family 43 GII85_14340 PF05343 M42 glutamyl aminopeptidase GII85_14350 PF06961 Protein of unknown function (DUF1294) GII85_14355 PF00453 Ribosomal protein L20 GII85_14360 PF01632 Ribosomal protein L35 GII85_14365 PF00707 Translation initiation factor IF-3, C-terminal domain GII85_14365 PF05198 Translation initiation factor IF-3, N-terminal domain GII85_14375 PF04172 LrgB-like family GII85_14380 PF03788 LrgA family GII85_14385 PF00072 Response regulator receiver domain GII85_14385 PF04397 LytTr DNA-binding domain GII85_14390 PF07694 5TMR of 5TMR-LYT GII85_14390 PF06580 Histidine kinase GII85_14390 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GII85_14400 PF02824 TGS domain GII85_14400 PF03129 Anticodon binding domain GII85_14400 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain GII85_14400 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) GII85_14405 PF08812 YtxC-like family GII85_14410 PF09335 SNARE associated Golgi protein GII85_14415 PF01695 IstB-like ATP binding protein GII85_14415 PF07319 Primosomal protein DnaI N-terminus GII85_14420 PF07261 Replication initiation and membrane attachment GII85_14425 PF03477 ATP cone domain GII85_14430 PF02675 S-adenosylmethionine decarboxylase GII85_14435 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain GII85_14435 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain GII85_14440 PF01638 HxlR-like helix-turn-helix GII85_14445 PF07690 Major Facilitator Superfamily GII85_14450 PF00248 Aldo/keto reductase family GII85_14455 PF01121 Dephospho-CoA kinase GII85_14460 PF02659 Putative manganese efflux pump GII85_14465 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain GII85_14465 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain GII85_14465 PF06827 Zinc finger found in FPG and IleRS GII85_14470 PF01367 5'-3' exonuclease, C-terminal SAM fold GII85_14470 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain GII85_14470 PF00476 DNA polymerase family A GII85_14475 PF00512 His Kinase A (phospho-acceptor) domain GII85_14475 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GII85_14475 PF00989 PAS fold GII85_14475 PF16736 Single Cache-like GII85_14480 PF00072 Response regulator receiver domain GII85_14480 PF00486 Transcriptional regulatory protein, C terminal GII85_14485 PF00056 lactate/malate dehydrogenase, NAD binding domain GII85_14485 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain GII85_14490 PF00180 Isocitrate/isopropylmalate dehydrogenase GII85_14495 PF00285 Citrate synthase, C-terminal domain GII85_14500 PF04284 Protein of unknown function (DUF441) GII85_14505 PF01594 AI-2E family transporter GII85_14510 PF04186 FxsA cytoplasmic membrane protein GII85_14515 PF02887 Pyruvate kinase, alpha/beta domain GII85_14515 PF00224 Pyruvate kinase, barrel domain GII85_14515 PF00391 PEP-utilising enzyme, mobile domain GII85_14520 PF00365 Phosphofructokinase GII85_14525 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit GII85_14530 PF01039 Carboxyl transferase domain GII85_14530 PF17848 Acetyl-coA carboxylase zinc finger domain GII85_14535 PF00390 Malic enzyme, N-terminal domain GII85_14535 PF03949 Malic enzyme, NAD binding domain GII85_14540 PF07733 Bacterial DNA polymerase III alpha NTPase domain GII85_14540 PF01336 OB-fold nucleic acid binding domain GII85_14540 PF02811 PHP domain GII85_14540 PF14579 Helix-hairpin-helix motif GII85_14540 PF17657 Bacterial DNA polymerase III alpha subunit finger domain GII85_14545 PF14034 Sporulation protein YtrH GII85_14560 PF02272 DHHA1 domain GII85_14560 PF01368 DHH family GII85_14565 PF14007 YtpI-like protein GII85_14570 PF07085 DRTGG domain GII85_14570 PF03061 Thioesterase superfamily GII85_14570 PF00392 Bacterial regulatory proteins, gntR family GII85_14570 PF00571 CBS domain GII85_14575 PF01925 Sulfite exporter TauE/SafE GII85_14580 PF07687 Peptidase dimerisation domain GII85_14580 PF01546 Peptidase family M20/M25/M40 GII85_14585 PF01687 Riboflavin kinase GII85_14590 PF00296 Luciferase-like monooxygenase GII85_14595 PF00462 Glutaredoxin GII85_14600 PF00296 Luciferase-like monooxygenase GII85_14605 PF00005 ABC transporter GII85_14610 PF00528 Binding-protein-dependent transport system inner membrane component GII85_14615 PF00528 Binding-protein-dependent transport system inner membrane component GII85_14620 PF00497 Bacterial extracellular solute-binding proteins, family 3 GII85_14625 PF00497 Bacterial extracellular solute-binding proteins, family 3 GII85_14630 PF00583 Acetyltransferase (GNAT) family GII85_14635 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GII85_14635 PF03466 LysR substrate binding domain GII85_14655 PF14698 Argininosuccinate lyase C-terminal GII85_14655 PF00206 Lyase GII85_14660 PF00764 Arginosuccinate synthase GII85_14665 PF00994 Probable molybdopterin binding domain GII85_14670 PF00871 Acetokinase family GII85_14680 PF02384 N-6 DNA Methylase GII85_14685 PF08534 Redoxin GII85_14690 PF09579 Sporulation protein YtfJ (Spore_YtfJ) GII85_14695 PF11167 Protein of unknown function (DUF2953) GII85_14700 PF06271 RDD family GII85_14705 PF01343 Peptidase family S49 GII85_14710 PF01513 ATP-NAD kinase GII85_14715 PF07969 Amidohydrolase family GII85_14720 PF13193 AMP-binding enzyme C-terminal domain GII85_14720 PF00501 AMP-binding enzyme GII85_14725 PF00269 Small, acid-soluble spore proteins, alpha/beta type GII85_14730 PF02568 Thiamine biosynthesis protein (ThiI) GII85_14730 PF02926 THUMP domain GII85_14735 PF00266 Aminotransferase class-V GII85_14740 PF05525 Branched-chain amino acid transport protein GII85_14745 PF06160 Septation ring formation regulator, EzrA GII85_14750 PF02811 PHP domain GII85_14755 PF00440 Bacterial regulatory proteins, tetR family GII85_14760 PF13185 GAF domain GII85_14765 PF00990 Diguanylate cyclase, GGDEF domain GII85_14775 PF01479 S4 domain GII85_14775 PF00163 Ribosomal protein S4/S9 N-terminal domain GII85_14780 PF00579 tRNA synthetases class I (W and Y) GII85_14780 PF01479 S4 domain GII85_14785 PF00501 AMP-binding enzyme GII85_14785 PF13193 AMP-binding enzyme C-terminal domain GII85_14790 PF00583 Acetyltransferase (GNAT) family GII85_14795 PF00571 CBS domain GII85_14800 PF00850 Histone deacetylase domain GII85_14805 PF00691 OmpA family GII85_14805 PF13677 Membrane MotB of proton-channel complex MotA/MotB GII85_14810 PF01618 MotA/TolQ/ExbB proton channel family GII85_14815 PF00356 Bacterial regulatory proteins, lacI family GII85_14820 PF00793 DAHP synthetase I family GII85_14820 PF01817 Chorismate mutase type II GII85_14825 PF11009 Protein of unknown function (DUF2847) GII85_14830 PF12732 YtxH-like protein GII85_14835 PF06103 Bacterial protein of unknown function (DUF948) GII85_14840 PF01225 Mur ligase family, catalytic domain GII85_14840 PF02875 Mur ligase family, glutamate ligase domain GII85_14840 PF08245 Mur ligase middle domain GII85_14845 PF01580 FtsK/SpoIIIE family GII85_14845 PF09397 Ftsk gamma domain GII85_14845 PF17854 FtsK alpha domain GII85_14850 PF14794 Domain of unknown function (DUF4479) GII85_14850 PF01588 Putative tRNA binding domain GII85_14855 PF07285 Protein of unknown function (DUF1444) GII85_14860 PF00085 Thioredoxin GII85_14870 PF11071 Nucleoside 2-deoxyribosyltransferase YtoQ GII85_14875 PF05343 M42 glutamyl aminopeptidase GII85_14880 PF03413 Peptidase propeptide and YPEB domain GII85_14885 PF00390 Malic enzyme, N-terminal domain GII85_14885 PF03949 Malic enzyme, NAD binding domain GII85_14890 PF00753 Metallo-beta-lactamase superfamily GII85_14895 PF02390 Putative methyltransferase GII85_14900 PF14165 YtzH-like protein GII85_14905 PF01636 Phosphotransferase enzyme family GII85_14910 PF17999 Pullulanase N1-terminal domain GII85_14910 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) GII85_14910 PF00128 Alpha amylase, catalytic domain GII85_14915 PF00781 Diacylglycerol kinase catalytic domain GII85_14930 PF00291 Pyridoxal-phosphate dependent enzyme GII85_14935 PF01546 Peptidase family M20/M25/M40 GII85_14940 PF00860 Permease family GII85_14945 PF05975 Bacterial ABC transporter protein EcsB GII85_14950 PF00005 ABC transporter GII85_14955 PF08220 DeoR-like helix-turn-helix domain GII85_14960 PF00849 RNA pseudouridylate synthase GII85_14960 PF01479 S4 domain GII85_14965 PF01943 Polysaccharide biosynthesis protein GII85_14965 PF14667 Polysaccharide biosynthesis C-terminal domain GII85_14975 PF02028 BCCT, betaine/carnitine/choline family transporter GII85_14980 PF10957 Sporulation protein Cse60 GII85_14985 PF04854 Protein of unknown function, DUF624 GII85_14990 PF02894 Oxidoreductase family, C-terminal alpha/beta domain GII85_14990 PF01408 Oxidoreductase family, NAD-binding Rossmann fold GII85_15000 PF07470 Glycosyl Hydrolase Family 88 GII85_15005 PF00528 Binding-protein-dependent transport system inner membrane component GII85_15010 PF12833 Helix-turn-helix domain GII85_15010 PF17853 GGDEF-like domain GII85_15015 PF13416 Bacterial extracellular solute-binding protein GII85_15020 PF00528 Binding-protein-dependent transport system inner membrane component GII85_15025 PF01370 NAD dependent epimerase/dehydratase family GII85_15030 PF00067 Cytochrome P450 GII85_15035 PF06968 Biotin and Thiamin Synthesis associated domain GII85_15035 PF04055 Radical SAM superfamily GII85_15045 PF00155 Aminotransferase class I and II GII85_15050 PF00202 Aminotransferase class-III GII85_15055 PF03744 6-carboxyhexanoate--CoA ligase GII85_15060 PF01738 Dienelactone hydrolase family GII85_15085 PF11975 Family 4 glycosyl hydrolase C-terminal domain GII85_15085 PF02056 Family 4 glycosyl hydrolase GII85_15090 PF00581 Rhodanese-like domain GII85_15095 PF13603 Leucyl-tRNA synthetase, Domain 2 GII85_15095 PF09334 tRNA synthetases class I (M) GII85_15095 PF08264 Anticodon-binding domain of tRNA GII85_15095 PF00133 tRNA synthetases class I (I, L, M and V) GII85_15100 PF14074 Protein of unknown function (DUF4257) GII85_15105 PF13426 PAS domain GII85_15105 PF01740 STAS domain GII85_15110 PF07690 Major Facilitator Superfamily GII85_15115 PF04791 LMBR1-like membrane protein GII85_15120 PF02687 FtsX-like permease family GII85_15125 PF00005 ABC transporter GII85_15130 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GII85_15135 PF00486 Transcriptional regulatory protein, C terminal GII85_15135 PF00072 Response regulator receiver domain GII85_15140 PF02687 FtsX-like permease family GII85_15140 PF12704 MacB-like periplasmic core domain GII85_15145 PF00005 ABC transporter GII85_15160 PF00005 ABC transporter GII85_15165 PF00392 Bacterial regulatory proteins, gntR family GII85_15175 PF10732 Protein of unknown function (DUF2524) GII85_15180 PF04055 Radical SAM superfamily GII85_15180 PF16199 Radical_SAM C-terminal domain GII85_15185 PF06962 Putative rRNA methylase GII85_15190 PF10776 Protein of unknown function (DUF2600) GII85_15195 PF12146 Serine aminopeptidase, S33 GII85_15200 PF00132 Bacterial transferase hexapeptide (six repeats) GII85_15205 PF00324 Amino acid permease GII85_15210 PF00733 Asparagine synthase GII85_15210 PF13537 Glutamine amidotransferase domain GII85_15215 PF00438 S-adenosylmethionine synthetase, N-terminal domain GII85_15215 PF02773 S-adenosylmethionine synthetase, C-terminal domain GII85_15215 PF02772 S-adenosylmethionine synthetase, central domain GII85_15220 PF01293 Phosphoenolpyruvate carboxykinase GII85_15225 PF10763 Protein of unknown function (DUF2584) GII85_15230 PF00326 Prolyl oligopeptidase family GII85_15240 PF00005 ABC transporter GII85_15245 PF00528 Binding-protein-dependent transport system inner membrane component GII85_15250 PF00293 NUDIX domain GII85_15255 PF05105 Bacteriophage holin family GII85_15260 PF00210 Ferritin-like domain GII85_15270 PF13115 YtkA-like GII85_15275 PF02664 S-Ribosylhomocysteinase (LuxS) GII85_15280 PF01809 Putative membrane protein insertion efficiency factor GII85_15285 PF00484 Carbonic anhydrase GII85_15290 PF01197 Ribosomal protein L31 GII85_15295 PF01654 Cytochrome bd terminal oxidase subunit I GII85_15300 PF02322 Cytochrome bd terminal oxidase subunit II GII85_15305 PF07561 Domain of Unknown Function (DUF1540) GII85_15310 PF00950 ABC 3 transport family GII85_15315 PF00950 ABC 3 transport family GII85_15320 PF00005 ABC transporter GII85_15325 PF01297 Zinc-uptake complex component A periplasmic GII85_15330 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain GII85_15330 PF13378 Enolase C-terminal domain-like GII85_15335 PF13193 AMP-binding enzyme C-terminal domain GII85_15335 PF00501 AMP-binding enzyme GII85_15340 PF00378 Enoyl-CoA hydratase/isomerase GII85_15345 PF00561 alpha/beta hydrolase fold GII85_15350 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain GII85_15350 PF16582 Middle domain of thiamine pyrophosphate GII85_15350 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain GII85_15355 PF00425 chorismate binding enzyme GII85_15360 PF01258 Prokaryotic dksA/traR C4-type zinc finger GII85_15365 PF00483 Nucleotidyl transferase GII85_15370 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain GII85_15370 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain GII85_15370 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain GII85_15375 PF01370 NAD dependent epimerase/dehydratase family GII85_15380 PF00534 Glycosyl transferases group 1 GII85_15380 PF13439 Glycosyltransferase Family 4 GII85_15395 PF13439 Glycosyltransferase Family 4 GII85_15395 PF00534 Glycosyl transferases group 1 GII85_15400 PF01636 Phosphotransferase enzyme family GII85_15405 PF03073 TspO/MBR family GII85_15410 PF00343 Carbohydrate phosphorylase GII85_15415 PF08323 Starch synthase catalytic domain GII85_15415 PF00534 Glycosyl transferases group 1 GII85_15420 PF00483 Nucleotidyl transferase GII85_15425 PF00483 Nucleotidyl transferase GII85_15430 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) GII85_15430 PF02806 Alpha amylase, C-terminal all-beta domain GII85_15430 PF00128 Alpha amylase, catalytic domain GII85_15555 PF09515 Thiamine transporter protein (Thia_YuaJ) GII85_15560 PF00583 Acetyltransferase (GNAT) family GII85_15565 PF01145 SPFH domain / Band 7 family GII85_15565 PF15975 Flotillin GII85_15575 PF12867 DinB superfamily GII85_15585 PF00465 Iron-containing alcohol dehydrogenase GII85_15600 PF17735 Biofilm surface layer A GII85_15605 PF02254 TrkA-N domain GII85_15605 PF02080 TrkA-C domain GII85_15610 PF02386 Cation transport protein GII85_15615 PF05360 yiaA/B two helix domain GII85_15620 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase GII85_15620 PF13457 GW (Gly-Tryp) dipeptide domain GII85_15625 PF07690 Major Facilitator Superfamily GII85_15630 PF05995 Cysteine dioxygenase type I GII85_15640 PF02673 Bacitracin resistance protein BacA GII85_15645 PF01594 AI-2E family transporter GII85_15650 PF02894 Oxidoreductase family, C-terminal alpha/beta domain GII85_15650 PF01408 Oxidoreductase family, NAD-binding Rossmann fold GII85_15655 PF06134 L-rhamnose isomerase (RhaA) GII85_15660 PF05336 L-rhamnose mutarotase GII85_15665 PF02782 FGGY family of carbohydrate kinases, C-terminal domain GII85_15665 PF00370 FGGY family of carbohydrate kinases, N-terminal domain GII85_15670 PF00455 DeoR C terminal sensor domain GII85_15670 PF08220 DeoR-like helix-turn-helix domain GII85_15675 PF00596 Class II Aldolase and Adducin N-terminal domain GII85_15680 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GII85_15680 PF02743 Cache domain GII85_15680 PF00672 HAMP domain GII85_15685 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GII85_15685 PF00672 HAMP domain GII85_15685 PF02743 Cache domain GII85_15690 PF02743 Cache domain GII85_15690 PF00672 HAMP domain GII85_15690 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GII85_15695 PF02743 Cache domain GII85_15695 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GII85_15695 PF00672 HAMP domain GII85_15710 PF01894 Uncharacterised protein family UPF0047 GII85_15720 PF16657 Maltogenic Amylase, C-terminal domain GII85_15720 PF00128 Alpha amylase, catalytic domain GII85_15725 PF00571 CBS domain GII85_15725 PF01595 Cyclin M transmembrane N-terminal domain GII85_15725 PF03471 Transporter associated domain GII85_15730 PF04298 Putative neutral zinc metallopeptidase GII85_15740 PF11458 Membrane-integrating protein Mistic GII85_15745 PF02254 TrkA-N domain GII85_15745 PF07885 Ion channel GII85_15750 PF08868 YugN-like family GII85_15760 PF00342 Phosphoglucose isomerase GII85_15765 PF00465 Iron-containing alcohol dehydrogenase GII85_15770 PF00465 Iron-containing alcohol dehydrogenase GII85_15775 PF04070 Domain of unknown function (DUF378) GII85_15780 PF00575 S1 RNA binding domain GII85_15785 PF00155 Aminotransferase class I and II GII85_15790 PF01037 Lrp/AsnC ligand binding domain GII85_15795 PF08386 TAP-like protein GII85_15795 PF00561 alpha/beta hydrolase fold GII85_15800 PF08958 Domain of unknown function (DUF1871) GII85_15805 PF00155 Aminotransferase class I and II GII85_15810 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GII85_15810 PF00512 His Kinase A (phospho-acceptor) domain GII85_15815 PF08810 Kinase associated protein B GII85_15820 PF00929 Exonuclease GII85_15830 PF07690 Major Facilitator Superfamily GII85_15835 PF00912 Transglycosylase GII85_15835 PF00905 Penicillin binding protein transpeptidase domain GII85_15840 PF04134 Protein of unknown function, DUF393 GII85_15845 PF17328 Family of unknown function (DUF5366) GII85_15850 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain GII85_15850 PF17203 Single cache domain 3 GII85_15850 PF00989 PAS fold GII85_15850 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GII85_15855 PF00072 Response regulator receiver domain GII85_15880 PF03390 2-hydroxycarboxylate transporter family GII85_15890 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus GII85_15890 PF00361 Proton-conducting membrane transporter GII85_15890 PF13244 Domain of unknown function (DUF4040) GII85_15895 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter GII85_15900 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L GII85_15905 PF00361 Proton-conducting membrane transporter GII85_15910 PF01899 Na+/H+ ion antiporter subunit GII85_15915 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) GII85_15920 PF03334 Na+/H+ antiporter subunit GII85_15925 PF03061 Thioesterase superfamily GII85_15930 PF00072 Response regulator receiver domain GII85_15930 PF00196 Bacterial regulatory proteins, luxR family GII85_15935 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GII85_15935 PF07730 Histidine kinase GII85_15940 PF05952 Bacillus competence pheromone ComX GII85_15945 PF00348 Polyprenyl synthetase GII85_15950 PF08181 DegQ (SacQ) family GII85_15960 PF00563 EAL domain GII85_15960 PF08668 HDOD domain GII85_15965 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family GII85_15965 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain GII85_15965 PF17956 Nicotinate phosphoribosyltransferase C-terminal domain GII85_15970 PF00857 Isochorismatase family GII85_15975 PF07997 Protein of unknown function (DUF1694) GII85_15980 PF14166 YueH-like protein GII85_15985 PF10676 Spore germination protein gerPA/gerPF GII85_15990 PF01594 AI-2E family transporter GII85_15995 PF10049 Protein of unknown function (DUF2283) GII85_16000 PF10842 Protein of unknown function (DUF2642) GII85_16005 PF01966 HD domain GII85_16010 PF00106 short chain dehydrogenase GII85_16015 PF17355 Family of unknown function (DUF5383) GII85_16025 PF01580 FtsK/SpoIIIE family GII85_16025 PF12538 DNA transporter GII85_16030 PF10140 WXG100 protein secretion system (Wss), protein YukC GII85_16035 PF08817 WXG100 protein secretion system (Wss), protein YukD GII85_16040 PF06013 Proteins of 100 residues with WXG GII85_16045 PF06018 CodY GAF-like domain GII85_16045 PF13556 PucR C-terminal helix-turn-helix domain GII85_16045 PF17853 GGDEF-like domain GII85_16050 PF01262 Alanine dehydrogenase/PNT, C-terminal domain GII85_16050 PF05222 Alanine dehydrogenase/PNT, N-terminal domain GII85_16055 PF10042 Uncharacterized conserved protein (DUF2278) GII85_16060 PF03621 MbtH-like protein GII85_16065 PF13193 AMP-binding enzyme C-terminal domain GII85_16065 PF00501 AMP-binding enzyme GII85_16065 PF00668 Condensation domain GII85_16065 PF00550 Phosphopantetheine attachment site GII85_16065 PF00975 Thioesterase domain GII85_16070 PF00857 Isochorismatase family GII85_16070 PF00550 Phosphopantetheine attachment site GII85_16075 PF00501 AMP-binding enzyme GII85_16075 PF13193 AMP-binding enzyme C-terminal domain GII85_16080 PF00425 chorismate binding enzyme GII85_16085 PF00106 short chain dehydrogenase GII85_16090 PF00756 Putative esterase GII85_16095 PF00174 Oxidoreductase molybdopterin binding domain GII85_16100 PF02632 BioY family GII85_16105 PF13726 Na+-H+ antiporter family GII85_16105 PF03553 Na+/H+ antiporter family GII85_16110 PF02789 Cytosol aminopeptidase family, N-terminal domain GII85_16110 PF00883 Cytosol aminopeptidase family, catalytic domain GII85_16115 PF02681 Divergent PAP2 family GII85_16120 PF06725 3D domain GII85_16125 PF14068 Putative membrane protein GII85_16130 PF17302 Family of unknown function (DUF5351) GII85_16135 PF07992 Pyridine nucleotide-disulphide oxidoreductase GII85_16140 PF07992 Pyridine nucleotide-disulphide oxidoreductase GII85_16150 PF00478 IMP dehydrogenase / GMP reductase domain GII85_16155 PF04299 Putative FMN-binding domain GII85_16160 PF00583 Acetyltransferase (GNAT) family GII85_16165 PF01521 Iron-sulphur cluster biosynthesis GII85_16170 PF01678 Diaminopimelate epimerase GII85_16175 PF01773 Na+ dependent nucleoside transporter N-terminus GII85_16175 PF07662 Na+ dependent nucleoside transporter C-terminus GII85_16180 PF07293 Protein of unknown function (DUF1450) GII85_16185 PF07992 Pyridine nucleotide-disulphide oxidoreductase GII85_16190 PF07315 Protein of unknown function (DUF1462) GII85_16195 PF01106 NifU-like domain GII85_16200 PF07676 WD40-like Beta Propeller Repeat GII85_16200 PF00326 Prolyl oligopeptidase family GII85_16205 PF00288 GHMP kinases N terminal domain GII85_16205 PF08544 GHMP kinases C terminal GII85_16210 PF00291 Pyridoxal-phosphate dependent enzyme GII85_16215 PF01842 ACT domain GII85_16215 PF03447 Homoserine dehydrogenase, NAD binding domain GII85_16215 PF00742 Homoserine dehydrogenase GII85_16225 PF04608 Phosphatidylglycerophosphatase A GII85_16230 PF13344 Haloacid dehalogenase-like hydrolase GII85_16235 PF01934 Protein of unknown function DUF86 GII85_16240 PF06265 Protein of unknown function (DUF1027) GII85_16245 PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) GII85_16250 PF04055 Radical SAM superfamily GII85_16250 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family GII85_16255 PF01551 Peptidase family M23 GII85_16260 PF09560 Sporulation protein YunB (Spo_YunB) GII85_16265 PF08827 Domain of unknown function (DUF1805) GII85_16270 PF02872 5'-nucleotidase, C-terminal domain GII85_16275 PF01925 Sulfite exporter TauE/SafE GII85_16280 PF01904 Protein of unknown function DUF72 GII85_16290 PF01979 Amidohydrolase family GII85_16295 PF17853 GGDEF-like domain GII85_16295 PF07905 Purine catabolism regulatory protein-like family GII85_16295 PF13556 PucR C-terminal helix-turn-helix domain GII85_16300 PF00860 Permease family GII85_16305 PF00860 Permease family GII85_16310 PF01014 Uricase GII85_16310 PF09349 OHCU decarboxylase GII85_16315 PF00576 HIUase/Transthyretin family GII85_16320 PF09680 Family of unknown function GII85_16325 PF00111 2Fe-2S iron-sulfur cluster binding domain GII85_16325 PF01799 [2Fe-2S] binding domain GII85_16330 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain GII85_16330 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase GII85_16335 PF00941 FAD binding domain in molybdopterin dehydrogenase GII85_16340 PF12804 MobA-like NTP transferase domain GII85_16345 PF13478 XdhC Rossmann domain GII85_16345 PF02625 XdhC and CoxI family GII85_16350 PF00266 Aminotransferase class-V GII85_16355 PF01546 Peptidase family M20/M25/M40 GII85_16365 PF04231 Endonuclease I GII85_16370 PF00005 ABC transporter GII85_16370 PF17912 MalK OB fold domain GII85_16370 PF03459 TOBE domain GII85_16375 PF00392 Bacterial regulatory proteins, gntR family GII85_16375 PF07702 UTRA domain GII85_16385 PF00528 Binding-protein-dependent transport system inner membrane component GII85_16390 PF00528 Binding-protein-dependent transport system inner membrane component GII85_16395 PF01547 Bacterial extracellular solute-binding protein GII85_16400 PF01380 SIS domain GII85_16405 PF01541 GIY-YIG catalytic domain GII85_16410 PF01266 FAD dependent oxidoreductase GII85_16425 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily GII85_16435 PF01458 Uncharacterized protein family (UPF0051) GII85_16440 PF01592 NifU-like N terminal domain GII85_16445 PF00266 Aminotransferase class-V GII85_16450 PF01458 Uncharacterized protein family (UPF0051) GII85_16455 PF00005 ABC transporter GII85_16465 PF02627 Carboxymuconolactone decarboxylase family GII85_16470 PF03180 NLPA lipoprotein GII85_16475 PF00528 Binding-protein-dependent transport system inner membrane component GII85_16480 PF00005 ABC transporter GII85_16480 PF09383 NIL domain GII85_16485 PF02036 SCP-2 sterol transfer family GII85_16490 PF00085 Thioredoxin GII85_16495 PF01751 Toprim domain GII85_16500 PF10830 Protein of unknown function (DUF2553) GII85_16505 PF01597 Glycine cleavage H-protein GII85_16510 PF03960 ArsC family GII85_16515 PF02770 Acyl-CoA dehydrogenase, middle domain GII85_16515 PF00441 Acyl-CoA dehydrogenase, C-terminal domain GII85_16515 PF02771 Acyl-CoA dehydrogenase, N-terminal domain GII85_16520 PF02803 Thiolase, C-terminal domain GII85_16520 PF00108 Thiolase, N-terminal domain GII85_16525 PF00378 Enoyl-CoA hydratase/isomerase GII85_16525 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain GII85_16525 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain GII85_16530 PF14115 YuzL-like protein GII85_16535 PF01619 Proline dehydrogenase GII85_16545 PF07875 Coat F domain GII85_16550 PF01047 MarR family GII85_16555 PF07690 Major Facilitator Superfamily GII85_16560 PF14552 Tautomerase enzyme GII85_16570 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GII85_16570 PF03466 LysR substrate binding domain GII85_16575 PF10835 Protein of unknown function (DUF2573) GII85_16580 PF00005 ABC transporter GII85_16585 PF14039 YusW-like protein GII85_16595 PF00106 short chain dehydrogenase GII85_16600 PF00210 Ferritin-like domain GII85_16605 PF13180 PDZ domain GII85_16610 PF00072 Response regulator receiver domain GII85_16610 PF00486 Transcriptional regulatory protein, C terminal GII85_16615 PF00672 HAMP domain GII85_16615 PF00512 His Kinase A (phospho-acceptor) domain GII85_16615 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GII85_16625 PF00440 Bacterial regulatory proteins, tetR family GII85_16630 PF00206 Lyase GII85_16630 PF10415 Fumarase C C-terminus GII85_16635 PF13113 Protein of unknown function (DUF3970) GII85_16640 PF03323 Bacillus/Clostridium GerA spore germination protein GII85_16645 PF03845 Spore germination protein GII85_16650 PF05504 Spore germination B3/ GerAC like, C-terminal GII85_16655 PF00072 Response regulator receiver domain GII85_16655 PF00196 Bacterial regulatory proteins, luxR family GII85_16660 PF00672 HAMP domain GII85_16660 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GII85_16660 PF07730 Histidine kinase GII85_16665 PF09922 Cell wall-active antibiotics response 4TMS YvqF GII85_16670 PF13349 Putative adhesin GII85_16675 PF04012 PspA/IM30 family GII85_16685 PF07690 Major Facilitator Superfamily GII85_16690 PF01923 Cobalamin adenosyltransferase GII85_16695 PF00005 ABC transporter GII85_16700 PF01032 FecCD transport family GII85_16705 PF01497 Periplasmic binding protein GII85_16710 PF00106 short chain dehydrogenase GII85_16715 PF08450 SMP-30/Gluconolactonase/LRE-like region GII85_16720 PF00512 His Kinase A (phospho-acceptor) domain GII85_16720 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GII85_16725 PF00486 Transcriptional regulatory protein, C terminal GII85_16725 PF00072 Response regulator receiver domain GII85_16735 PF04545 Sigma-70, region 4 GII85_16740 PF12841 YvrJ protein family GII85_16745 PF00190 Cupin GII85_16750 PF14184 Regulatory protein YrvL GII85_16755 PF12704 MacB-like periplasmic core domain GII85_16755 PF02687 FtsX-like permease family GII85_16760 PF00005 ABC transporter GII85_16765 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion GII85_16770 PF00005 ABC transporter GII85_16775 PF01032 FecCD transport family GII85_16780 PF01032 FecCD transport family GII85_16785 PF01497 Periplasmic binding protein GII85_16790 PF13520 Amino acid permease GII85_16795 PF09575 Small spore protein J (Spore_SspJ) GII85_16800 PF04307 LexA-binding, inner membrane-associated putative hydrolase GII85_16805 PF00884 Sulfatase GII85_16810 PF12727 PBP superfamily domain GII85_16810 PF12728 Helix-turn-helix domain GII85_16820 PF00528 Binding-protein-dependent transport system inner membrane component GII85_16825 PF00248 Aldo/keto reductase family GII85_16835 PF00999 Sodium/hydrogen exchanger family GII85_16840 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain GII85_16840 PF01077 Nitrite and sulphite reductase 4Fe-4S domain GII85_16845 PF00258 Flavodoxin GII85_16845 PF00667 FAD binding domain GII85_16845 PF00175 Oxidoreductase NAD-binding domain GII85_16850 PF13538 UvrD-like helicase C-terminal domain GII85_16860 PF03458 UPF0126 domain GII85_16865 PF02600 Disulfide bond formation protein DsbB GII85_16870 PF13462 Thioredoxin GII85_16875 PF00403 Heavy-metal-associated domain GII85_16880 PF00403 Heavy-metal-associated domain GII85_16885 PF00403 Heavy-metal-associated domain GII85_16890 PF02583 Metal-sensitive transcriptional repressor GII85_16895 PF02894 Oxidoreductase family, C-terminal alpha/beta domain GII85_16895 PF01408 Oxidoreductase family, NAD-binding Rossmann fold GII85_16900 PF02525 Flavodoxin-like fold GII85_16910 PF17314 Family of unknown function (DUF5360) GII85_16915 PF00893 Small Multidrug Resistance protein GII85_16920 PF00440 Bacterial regulatory proteins, tetR family GII85_16925 PF00106 short chain dehydrogenase GII85_16950 PF01668 SmpB protein GII85_16955 PF00773 RNB domain GII85_16955 PF00575 S1 RNA binding domain GII85_16955 PF17876 Cold shock domain GII85_16955 PF08206 Ribonuclease B OB domain GII85_16960 PF12146 Serine aminopeptidase, S33 GII85_16965 PF03840 Preprotein translocase SecG subunit GII85_16970 PF00561 alpha/beta hydrolase fold GII85_16975 PF01381 Helix-turn-helix GII85_16990 PF01638 HxlR-like helix-turn-helix GII85_16995 PF00672 HAMP domain GII85_16995 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GII85_16995 PF12729 Four helix bundle sensory module for signal transduction GII85_17000 PF00512 His Kinase A (phospho-acceptor) domain GII85_17000 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GII85_17005 PF00072 Response regulator receiver domain GII85_17005 PF00486 Transcriptional regulatory protein, C terminal GII85_17020 PF00005 ABC transporter GII85_17030 PF02052 Gallidermin GII85_17035 PF05147 Lanthionine synthetase C-like protein GII85_17040 PF00005 ABC transporter GII85_17045 PF14028 Lantibiotic biosynthesis dehydratase C-term GII85_17045 PF04738 Lantibiotic dehydratase, N terminus GII85_17050 PF00528 Binding-protein-dependent transport system inner membrane component GII85_17055 PF04069 Substrate binding domain of ABC-type glycine betaine transport system GII85_17060 PF00528 Binding-protein-dependent transport system inner membrane component GII85_17065 PF00571 CBS domain GII85_17065 PF00005 ABC transporter GII85_17070 PF12802 MarR family GII85_17075 PF00528 Binding-protein-dependent transport system inner membrane component GII85_17080 PF04069 Substrate binding domain of ABC-type glycine betaine transport system GII85_17085 PF00528 Binding-protein-dependent transport system inner membrane component GII85_17090 PF00005 ABC transporter GII85_17090 PF00571 CBS domain GII85_17095 PF12802 MarR family GII85_17100 PF01914 MarC family integral membrane protein GII85_17105 PF08000 Bacterial PH domain GII85_17105 PF11724 YvbH-like oligomerisation region GII85_17115 PF13240 zinc-ribbon domain GII85_17120 PF00583 Acetyltransferase (GNAT) family GII85_17125 PF03952 Enolase, N-terminal domain GII85_17125 PF00113 Enolase, C-terminal TIM barrel domain GII85_17130 PF01676 Metalloenzyme superfamily GII85_17130 PF06415 BPG-independent PGAM N-terminus (iPGM_N) GII85_17135 PF00121 Triosephosphate isomerase GII85_17140 PF00162 Phosphoglycerate kinase GII85_17145 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain GII85_17145 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain GII85_17150 PF04198 Putative sugar-binding domain GII85_17155 PF00083 Sugar (and other) transporter GII85_17160 PF00392 Bacterial regulatory proteins, gntR family GII85_17165 PF00296 Luciferase-like monooxygenase GII85_17170 PF03466 LysR substrate binding domain GII85_17170 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GII85_17175 PF00892 EamA-like transporter family GII85_17180 PF00324 Amino acid permease GII85_17185 PF00704 Glycosyl hydrolases family 18 GII85_17190 PF02589 LUD domain GII85_17195 PF11870 Domain of unknown function (DUF3390) GII85_17195 PF13183 4Fe-4S dicluster domain GII85_17195 PF02589 LUD domain GII85_17200 PF02754 Cysteine-rich domain GII85_17205 PF00072 Response regulator receiver domain GII85_17205 PF00196 Bacterial regulatory proteins, luxR family GII85_17210 PF07730 Histidine kinase GII85_17210 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GII85_17220 PF00005 ABC transporter GII85_17225 PF12697 Alpha/beta hydrolase family GII85_17230 PF07228 Stage II sporulation protein E (SpoIIE) GII85_17230 PF13426 PAS domain GII85_17235 PF07745 Glycosyl hydrolase family 53 GII85_17240 PF08532 Beta-galactosidase trimerisation domain GII85_17240 PF02449 Beta-galactosidase GII85_17240 PF08533 Beta-galactosidase C-terminal domain GII85_17245 PF00528 Binding-protein-dependent transport system inner membrane component GII85_17250 PF00528 Binding-protein-dependent transport system inner membrane component GII85_17255 PF13416 Bacterial extracellular solute-binding protein GII85_17260 PF00356 Bacterial regulatory proteins, lacI family GII85_17265 PF00392 Bacterial regulatory proteins, gntR family GII85_17265 PF07729 FCD domain GII85_17270 PF02652 L-lactate permease GII85_17275 PF04552 Sigma-54, DNA binding domain GII85_17275 PF04963 Sigma-54 factor, core binding domain GII85_17275 PF00309 Sigma-54 factor, Activator interacting domain (AID) GII85_17280 PF09628 YvfG protein GII85_17285 PF04230 Polysaccharide pyruvyl transferase GII85_17290 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family GII85_17295 PF17836 PglD N-terminal domain GII85_17295 PF00132 Bacterial transferase hexapeptide (six repeats) GII85_17300 PF02397 Bacterial sugar transferase GII85_17305 PF01943 Polysaccharide biosynthesis protein GII85_17305 PF14667 Polysaccharide biosynthesis C-terminal domain GII85_17310 PF00535 Glycosyl transferase family 2 GII85_17315 PF04230 Polysaccharide pyruvyl transferase GII85_17320 PF00535 Glycosyl transferase family 2 GII85_17330 PF13439 Glycosyltransferase Family 4 GII85_17330 PF00534 Glycosyl transferases group 1 GII85_17335 PF00535 Glycosyl transferase family 2 GII85_17340 PF13439 Glycosyltransferase Family 4 GII85_17340 PF00534 Glycosyl transferases group 1 GII85_17345 PF02719 Polysaccharide biosynthesis protein GII85_17350 PF13614 AAA domain GII85_17355 PF02706 Chain length determinant protein GII85_17360 PF01381 Helix-turn-helix GII85_17360 PF08671 Anti-repressor SinI GII85_17365 PF00135 Carboxylesterase family GII85_17375 PF05870 Phenolic acid decarboxylase (PAD) GII85_17385 PF01177 Asp/Glu/Hydantoin racemase GII85_17390 PF11954 Domain of unknown function (DUF3471) GII85_17390 PF00144 Beta-lactamase GII85_17395 PF02435 Levansucrase/Invertase GII85_17400 PF00251 Glycosyl hydrolases family 32 N-terminal domain GII85_17400 PF08244 Glycosyl hydrolases family 32 C terminal GII85_17405 PF13520 Amino acid permease GII85_17410 PF00440 Bacterial regulatory proteins, tetR family GII85_17410 PF17934 Tetracyclin repressor-like, C-terminal domain GII85_17415 PF00893 Small Multidrug Resistance protein GII85_17420 PF00893 Small Multidrug Resistance protein GII85_17425 PF11553 Protein of unknown function (DUF3231) GII85_17435 PF00574 Clp protease GII85_17440 PF13419 Haloacid dehalogenase-like hydrolase GII85_17445 PF16657 Maltogenic Amylase, C-terminal domain GII85_17445 PF00128 Alpha amylase, catalytic domain GII85_17450 PF03636 Glycosyl hydrolase family 65, N-terminal domain GII85_17450 PF03632 Glycosyl hydrolase family 65 central catalytic domain GII85_17450 PF03633 Glycosyl hydrolase family 65, C-terminal domain GII85_17455 PF06691 Protein of unknown function (DUF1189) GII85_17460 PF00528 Binding-protein-dependent transport system inner membrane component GII85_17465 PF00528 Binding-protein-dependent transport system inner membrane component GII85_17470 PF13416 Bacterial extracellular solute-binding protein GII85_17475 PF00128 Alpha amylase, catalytic domain GII85_17475 PF02903 Alpha amylase, N-terminal ig-like domain GII85_17480 PF00356 Bacterial regulatory proteins, lacI family GII85_17485 PF03641 Possible lysine decarboxylase GII85_17490 PF03819 MazG nucleotide pyrophosphohydrolase domain GII85_17495 PF01740 STAS domain GII85_17495 PF00916 Sulfate permease family GII85_17500 PF00484 Carbonic anhydrase GII85_17505 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain GII85_17505 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GII85_17510 PF02687 FtsX-like permease family GII85_17515 PF00005 ABC transporter GII85_17520 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GII85_17525 PF00486 Transcriptional regulatory protein, C terminal GII85_17525 PF00072 Response regulator receiver domain GII85_17540 PF00797 N-acetyltransferase GII85_17545 PF00381 PTS HPr component phosphorylation site GII85_17550 PF02650 WhiA C-terminal HTH domain GII85_17550 PF14527 WhiA LAGLIDADG-like domain GII85_17550 PF10298 WhiA N-terminal LAGLIDADG-like domain GII85_17555 PF01933 Uncharacterised protein family UPF0052 GII85_17560 PF03668 P-loop ATPase protein family GII85_17565 PF00293 NUDIX domain GII85_17570 PF07992 Pyridine nucleotide-disulphide oxidoreductase GII85_17575 PF00877 NlpC/P60 family GII85_17585 PF00005 ABC transporter GII85_17585 PF00664 ABC transporter transmembrane region GII85_17605 PF01502 Phosphoribosyl-AMP cyclohydrolase GII85_17605 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase GII85_17610 PF00977 Histidine biosynthesis protein GII85_17615 PF00977 Histidine biosynthesis protein GII85_17620 PF00117 Glutamine amidotransferase class-I GII85_17625 PF00475 Imidazoleglycerol-phosphate dehydratase GII85_17630 PF00815 Histidinol dehydrogenase GII85_17635 PF01634 ATP phosphoribosyltransferase GII85_17640 PF13393 Histidyl-tRNA synthetase GII85_17645 PF13529 Peptidase_C39 like family GII85_17650 PF03211 Pectate lyase GII85_17655 PF14602 Hexapeptide repeat of succinyl-transferase GII85_17660 PF13419 Haloacid dehalogenase-like hydrolase GII85_17665 PF07670 Nucleoside recognition GII85_17670 PF01790 Prolipoprotein diacylglyceryl transferase GII85_17675 PF02603 HPr Serine kinase N terminus GII85_17675 PF07475 HPr Serine kinase C-terminal domain GII85_17680 PF01979 Amidohydrolase family GII85_17685 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase GII85_17695 PF00149 Calcineurin-like phosphoesterase GII85_17700 PF01047 MarR family GII85_17710 PF16715 Cyclodipeptide synthase GII85_17715 PF01047 MarR family GII85_17720 PF07690 Major Facilitator Superfamily GII85_17725 PF04020 Mycobacterial 4 TMS phage holin, superfamily IV GII85_17730 PF04024 PspC domain GII85_17735 PF13349 Putative adhesin GII85_17755 PF17755 UvrA DNA-binding domain GII85_17755 PF00005 ABC transporter GII85_17755 PF17760 UvrA interaction domain GII85_17760 PF17757 UvrB interaction domain GII85_17760 PF12344 Ultra-violet resistance protein B GII85_17760 PF00271 Helicase conserved C-terminal domain GII85_17760 PF02151 UvrB/uvrC motif GII85_17760 PF04851 Type III restriction enzyme, res subunit GII85_17765 PF09964 Uncharacterized protein conserved in bacteria (DUF2198) GII85_17770 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain GII85_17770 PF00391 PEP-utilising enzyme, mobile domain GII85_17775 PF00440 Bacterial regulatory proteins, tetR family GII85_17780 PF07690 Major Facilitator Superfamily GII85_17785 PF17820 PDZ domain GII85_17790 PF17423 Swarming motility protein GII85_17795 PF01471 Putative peptidoglycan binding domain GII85_17795 PF03572 Peptidase family S41 GII85_17795 PF17820 PDZ domain GII85_17800 PF02687 FtsX-like permease family GII85_17800 PF18075 FtsX extracellular domain GII85_17805 PF00005 ABC transporter GII85_17810 PF13442 Cytochrome C oxidase, cbb3-type, subunit III GII85_17815 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 GII85_17815 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) GII85_17825 PF07516 SecA Wing and Scaffold domain GII85_17825 PF01043 SecA preprotein cross-linking domain GII85_17825 PF07517 SecA DEAD-like domain GII85_17825 PF02810 SEC-C motif GII85_17830 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus GII85_17830 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein GII85_17845 PF02561 Flagellar protein FliS GII85_17850 PF07195 Flagellar hook-associated protein 2 C-terminus GII85_17850 PF02465 Flagellar hook-associated protein 2 N-terminus GII85_17850 PF07196 Flagellin hook IN motif GII85_17855 PF03646 FlaG protein GII85_17860 PF00669 Bacterial flagellin N-terminal helical region GII85_17860 PF00700 Bacterial flagellin C-terminal helical region GII85_17865 PF02599 Global regulator protein family GII85_17870 PF02623 FliW protein GII85_17880 PF00700 Bacterial flagellin C-terminal helical region GII85_17880 PF00669 Bacterial flagellin N-terminal helical region GII85_17885 PF00460 Flagella basal body rod protein GII85_17885 PF06429 Flagellar basal body rod FlgEFG protein C-terminal GII85_17890 PF05130 FlgN protein GII85_17895 PF04316 Anti-sigma-28 factor, FlgM GII85_17910 PF10719 Late competence development protein ComFB GII85_17915 PF04851 Type III restriction enzyme, res subunit GII85_17915 PF00271 Helicase conserved C-terminal domain GII85_17920 PF02645 Uncharacterised protein, DegV family COG1307 GII85_17925 PF00072 Response regulator receiver domain GII85_17925 PF00196 Bacterial regulatory proteins, luxR family GII85_17930 PF07730 Histidine kinase GII85_17930 PF05384 Sensor protein DegS GII85_17930 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GII85_17935 PF09186 Domain of unknown function (DUF1949) GII85_17935 PF01205 Uncharacterized protein family UPF0029 GII85_17940 PF03816 Cell envelope-related transcriptional attenuator domain GII85_17945 PF00953 Glycosyl transferase family 4 GII85_17955 PF00535 Glycosyl transferase family 2 GII85_17960 PF02706 Chain length determinant protein GII85_17965 PF04932 O-Antigen ligase GII85_17970 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain GII85_17970 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain GII85_17970 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain GII85_17975 PF13439 Glycosyltransferase Family 4 GII85_17975 PF00534 Glycosyl transferases group 1 GII85_17980 PF14667 Polysaccharide biosynthesis C-terminal domain GII85_17980 PF01943 Polysaccharide biosynthesis protein GII85_17985 PF02397 Bacterial sugar transferase GII85_17990 PF00535 Glycosyl transferase family 2 GII85_17990 PF18674 TarS beta-glycosyltransferase C-terminal domain 1 GII85_17995 PF01520 N-acetylmuramoyl-L-alanine amidase GII85_17995 PF04122 Putative cell wall binding repeat 2 GII85_18000 PF08486 Stage II sporulation protein GII85_18000 PF04122 Putative cell wall binding repeat 2 GII85_18010 PF03816 Cell envelope-related transcriptional attenuator domain GII85_18015 PF02350 UDP-N-acetylglucosamine 2-epimerase GII85_18020 PF18674 TarS beta-glycosyltransferase C-terminal domain 1 GII85_18020 PF00535 Glycosyl transferase family 2 GII85_18025 PF00534 Glycosyl transferases group 1 GII85_18035 PF00483 Nucleotidyl transferase GII85_18040 PF00005 ABC transporter GII85_18045 PF01061 ABC-2 type transporter GII85_18050 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase GII85_18050 PF00535 Glycosyl transferase family 2 GII85_18055 PF00535 Glycosyl transferase family 2 GII85_18060 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase GII85_18065 PF01467 Cytidylyltransferase-like GII85_18070 PF03808 Glycosyl transferase WecB/TagA/CpsF family GII85_18075 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase GII85_18080 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase GII85_18085 PF08240 Alcohol dehydrogenase GroES-like domain GII85_18085 PF16912 Glucose dehydrogenase C-terminus GII85_18090 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase GII85_18095 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase GII85_18100 PF05036 Sporulation related domain GII85_18100 PF08239 Bacterial SH3 domain GII85_18100 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase GII85_18105 PF01238 Phosphomannose isomerase type I GII85_18110 PF03323 Bacillus/Clostridium GerA spore germination protein GII85_18115 PF03845 Spore germination protein GII85_18120 PF05504 Spore germination B3/ GerAC like, C-terminal GII85_18125 PF00083 Sugar (and other) transporter GII85_18130 PF03816 Cell envelope-related transcriptional attenuator domain GII85_18140 PF00877 NlpC/P60 family GII85_18150 PF09587 Bacterial capsule synthesis protein PGA_cap GII85_18155 PF14102 Capsule biosynthesis CapC GII85_18160 PF08245 Mur ligase middle domain GII85_18165 PF00356 Bacterial regulatory proteins, lacI family GII85_18170 PF00294 pfkB family carbohydrate kinase GII85_18175 PF05025 RbsD / FucU transport protein family GII85_18180 PF00005 ABC transporter GII85_18185 PF02653 Branched-chain amino acid transport system / permease component GII85_18190 PF13407 Periplasmic binding protein domain GII85_18195 PF08239 Bacterial SH3 domain GII85_18200 PF13031 Protein of unknown function (DUF3892) GII85_18205 PF02525 Flavodoxin-like fold GII85_18210 PF03306 Alpha-acetolactate decarboxylase GII85_18215 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain GII85_18215 PF00205 Thiamine pyrophosphate enzyme, central domain GII85_18215 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain GII85_18220 PF03466 LysR substrate binding domain GII85_18220 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GII85_18225 PF02040 Arsenical pump membrane protein GII85_18240 PF08757 CotH kinase protein GII85_18250 PF01613 Flavin reductase like domain GII85_18255 PF13789 Domain of unknown function (DUF4181) GII85_18265 PF13404 AsnC-type helix-turn-helix domain GII85_18265 PF01037 Lrp/AsnC ligand binding domain GII85_18270 PF02417 Chromate transporter GII85_18275 PF02417 Chromate transporter GII85_18280 PF04493 Endonuclease V GII85_18290 PF04740 LXG domain of WXG superfamily GII85_18290 PF14431 YwqJ-like deaminase GII85_18290 PF14449 Pre-toxin TG GII85_18300 PF16888 Domain of unknown function (DUF5082) GII85_18310 PF09234 Domain of unknown function (DUF1963) GII85_18315 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain GII85_18315 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain GII85_18315 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain GII85_18325 PF13614 AAA domain GII85_18330 PF13807 G-rich domain on putative tyrosine kinase GII85_18330 PF02706 Chain length determinant protein GII85_18340 PF04434 SWIM zinc finger GII85_18345 PF12419 SNF2 Helicase protein GII85_18345 PF00271 Helicase conserved C-terminal domain GII85_18345 PF00176 SNF2 family N-terminal domain GII85_18355 PF08220 DeoR-like helix-turn-helix domain GII85_18355 PF00455 DeoR C terminal sensor domain GII85_18360 PF00436 Single-strand binding protein family GII85_18370 PF14183 YwpF-like protein GII85_18375 PF04203 Sortase domain GII85_18385 PF00072 Response regulator receiver domain GII85_18385 PF04397 LytTr DNA-binding domain GII85_18390 PF06580 Histidine kinase GII85_18390 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GII85_18395 PF01741 Large-conductance mechanosensitive channel, MscL GII85_18400 PF07977 FabA-like domain GII85_18405 PF18801 response regulator aspartate phosphatase H, N terminal GII85_18410 PF06429 Flagellar basal body rod FlgEFG protein C-terminal GII85_18410 PF00460 Flagella basal body rod protein GII85_18415 PF06429 Flagellar basal body rod FlgEFG protein C-terminal GII85_18415 PF00460 Flagella basal body rod protein GII85_18425 PF12116 Stage III sporulation protein D GII85_18435 PF01047 MarR family GII85_18440 PF07690 Major Facilitator Superfamily GII85_18445 PF13229 Right handed beta helix region GII85_18450 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin GII85_18455 PF07690 Major Facilitator Superfamily GII85_18460 PF00857 Isochorismatase family GII85_18470 PF00909 Ammonium Transporter Family GII85_18475 PF00543 Nitrogen regulatory protein P-II GII85_18480 PF01569 PAP2 superfamily GII85_18485 PF04892 VanZ like family GII85_18490 PF01551 Peptidase family M23 GII85_18495 PF00583 Acetyltransferase (GNAT) family GII85_18500 PF17319 Family of unknown function (DUF5362) GII85_18510 PF17370 Family of unknown function (DUF5392) GII85_18515 PF13091 PLD-like domain GII85_18515 PF13396 Phospholipase_D-nuclease N-terminal GII85_18520 PF13411 MerR HTH family regulatory protein GII85_18520 PF07739 TipAS antibiotic-recognition domain GII85_18525 PF17319 Family of unknown function (DUF5362) GII85_18530 PF13460 NAD(P)H-binding GII85_18535 PF02082 Transcriptional regulator GII85_18540 PF00449 Urease alpha-subunit, N-terminal domain GII85_18540 PF01979 Amidohydrolase family GII85_18545 PF00699 Urease beta subunit GII85_18550 PF00547 Urease, gamma subunit GII85_18565 PF05532 CsbD-like GII85_18575 PF17874 MalT-like TPR region GII85_18575 PF18801 response regulator aspartate phosphatase H, N terminal GII85_18580 PF04055 Radical SAM superfamily GII85_18580 PF06463 Molybdenum Cofactor Synthesis C GII85_18585 PF02634 FdhD/NarQ family GII85_18595 PF00092 von Willebrand factor type A domain GII85_18605 PF00092 von Willebrand factor type A domain GII85_18610 PF08486 Stage II sporulation protein GII85_18615 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) GII85_18620 PF08680 TATA-box binding GII85_18625 PF06612 Protein of unknown function (DUF1146) GII85_18635 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain GII85_18635 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain GII85_18640 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain GII85_18640 PF02874 ATP synthase alpha/beta family, beta-barrel domain GII85_18645 PF00231 ATP synthase GII85_18650 PF00306 ATP synthase alpha/beta chain, C terminal domain GII85_18650 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain GII85_18650 PF02874 ATP synthase alpha/beta family, beta-barrel domain GII85_18655 PF00213 ATP synthase delta (OSCP) subunit GII85_18660 PF00430 ATP synthase B/B' CF(0) GII85_18665 PF00137 ATP synthase subunit C GII85_18670 PF00119 ATP synthase A chain GII85_18675 PF03899 ATP synthase I chain GII85_18685 PF00464 Serine hydroxymethyltransferase GII85_18690 PF04260 Protein of unknown function (DUF436) GII85_18695 PF02502 Ribose/Galactose Isomerase GII85_18700 PF01451 Low molecular weight phosphotyrosine protein phosphatase GII85_18705 PF02659 Putative manganese efflux pump GII85_18710 PF01300 Telomere recombination GII85_18710 PF03481 Putative GTP-binding controlling metal-binding GII85_18720 PF09551 Stage II sporulation protein R (spore_II_R) GII85_18725 PF17094 Uncharacterised protein family (UPF0715) GII85_18730 PF17247 Family of unknown function (DUF5316) GII85_18735 PF05175 Methyltransferase small domain GII85_18735 PF17827 PrmC N-terminal domain GII85_18740 PF03462 PCRF domain GII85_18740 PF00472 RF-1 domain GII85_18745 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily GII85_18750 PF13411 MerR HTH family regulatory protein GII85_18755 PF03547 Membrane transport protein GII85_18760 PF00390 Malic enzyme, N-terminal domain GII85_18760 PF03949 Malic enzyme, NAD binding domain GII85_18765 PF00265 Thymidine kinase GII85_18770 PF01197 Ribosomal protein L31 GII85_18775 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain GII85_18775 PF07498 Rho termination factor, N-terminal domain GII85_18775 PF07497 Rho termination factor, RNA-binding domain GII85_18785 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded GII85_18790 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) GII85_18795 PF00923 Transaldolase/Fructose-6-phosphate aldolase GII85_18800 PF01116 Fructose-bisphosphate aldolase class-II GII85_18805 PF00072 Response regulator receiver domain GII85_18810 PF10740 Domain of unknown function (DUF2529) GII85_18815 PF00117 Glutamine amidotransferase class-I GII85_18815 PF06418 CTP synthase N-terminus GII85_18820 PF05066 HB1, ASXL, restriction endonuclease HTH domain GII85_18825 PF00441 Acyl-CoA dehydrogenase, C-terminal domain GII85_18825 PF02771 Acyl-CoA dehydrogenase, N-terminal domain GII85_18825 PF02770 Acyl-CoA dehydrogenase, middle domain GII85_18830 PF02754 Cysteine-rich domain GII85_18830 PF13183 4Fe-4S dicluster domain GII85_18835 PF13091 PLD-like domain GII85_18840 PF03851 UV-endonuclease UvdE GII85_18850 PF01872 RibD C-terminal domain GII85_18855 PF00005 ABC transporter GII85_18855 PF00664 ABC transporter transmembrane region GII85_18860 PF13091 PLD-like domain GII85_18860 PF13396 Phospholipase_D-nuclease N-terminal GII85_18870 PF02665 Nitrate reductase gamma subunit GII85_18875 PF02613 Nitrate reductase delta subunit GII85_18880 PF14711 Respiratory nitrate reductase beta C-terminal GII85_18880 PF13247 4Fe-4S dicluster domain GII85_18885 PF01568 Molydopterin dinucleotide binding domain GII85_18885 PF14710 Respiratory nitrate reductase alpha N-terminal GII85_18885 PF00384 Molybdopterin oxidoreductase GII85_18895 PF14256 YwiC-like protein GII85_18900 PF00325 Bacterial regulatory proteins, crp family GII85_18900 PF00027 Cyclic nucleotide-binding domain GII85_18905 PF07690 Major Facilitator Superfamily GII85_18910 PF03485 Arginyl tRNA synthetase N terminal domain GII85_18910 PF05746 DALR anticodon binding domain GII85_18910 PF00750 tRNA synthetases class I (R) GII85_18915 PF09148 Domain of unknown function (DUF1934) GII85_18920 PF11420 Bacteriocin subtilosin A GII85_18930 PF04055 Radical SAM superfamily GII85_18930 PF05402 Coenzyme PQQ synthesis protein D (PqqD) GII85_18930 PF13186 Iron-sulfur cluster-binding domain GII85_18940 PF00005 ABC transporter GII85_18950 PF05193 Peptidase M16 inactive domain GII85_18955 PF00675 Insulinase (Peptidase family M16) GII85_18980 PF18801 response regulator aspartate phosphatase H, N terminal GII85_18985 PF11131 Rap-phr extracellular signalling GII85_18995 PF00491 Arginase family GII85_19000 PF17284 Spermidine synthase tetramerisation domain GII85_19005 PF00912 Transglycosylase GII85_19005 PF00905 Penicillin binding protein transpeptidase domain GII85_19015 PF08741 YwhD family GII85_19020 PF02163 Peptidase family M50 GII85_19025 PF01361 Tautomerase enzyme GII85_19030 PF01047 MarR family GII85_19035 PF03129 Anticodon binding domain GII85_19035 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain GII85_19035 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) GII85_19035 PF02824 TGS domain GII85_19040 PF07690 Major Facilitator Superfamily GII85_19045 PF02082 Transcriptional regulator GII85_19055 PF01966 HD domain GII85_19060 PF07293 Protein of unknown function (DUF1450) GII85_19070 PF00892 EamA-like transporter family GII85_19075 PF03099 Biotin/lipoate A/B protein ligase family GII85_19080 PF03466 LysR substrate binding domain GII85_19080 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GII85_19085 PF01515 Phosphate acetyl/butaryl transferase GII85_19100 PF00155 Aminotransferase class I and II GII85_19105 PF07690 Major Facilitator Superfamily GII85_19120 PF07883 Cupin domain GII85_19130 PF07690 Major Facilitator Superfamily GII85_19135 PF00324 Amino acid permease GII85_19140 PF01546 Peptidase family M20/M25/M40 GII85_19145 PF00171 Aldehyde dehydrogenase family GII85_19150 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase GII85_19150 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain GII85_19155 PF17735 Biofilm surface layer A GII85_19160 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase GII85_19165 PF04321 RmlD substrate binding domain GII85_19170 PF16363 GDP-mannose 4,6 dehydratase GII85_19175 PF00483 Nucleotidyl transferase GII85_19180 PF04101 Glycosyltransferase family 28 C-terminal domain GII85_19185 PF02348 Cytidylyltransferase GII85_19190 PF08666 SAF domain GII85_19190 PF03102 NeuB family GII85_19195 PF00583 Acetyltransferase (GNAT) family GII85_19200 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family GII85_19205 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase GII85_19210 PF00535 Glycosyl transferase family 2 GII85_19215 PF09671 Spore coat protein (Spore_GerQ) GII85_19220 PF04241 Protein of unknown function (DUF423) GII85_19225 PF00860 Permease family GII85_19230 PF17261 Family of unknown function (DUF5327) GII85_19235 PF00171 Aldehyde dehydrogenase family GII85_19240 PF03167 Uracil DNA glycosylase superfamily GII85_19245 PF00535 Glycosyl transferase family 2 GII85_19260 PF03551 Transcriptional regulator PadR-like family GII85_19265 PF08543 Phosphomethylpyrimidine kinase GII85_19275 PF08244 Glycosyl hydrolases family 32 C terminal GII85_19275 PF00251 Glycosyl hydrolases family 32 N-terminal domain GII85_19280 PF00367 phosphotransferase system, EIIB GII85_19280 PF02378 Phosphotransferase system, EIIC GII85_19285 PF01226 Formate/nitrite transporter GII85_19290 PF00874 PRD domain GII85_19290 PF03123 CAT RNA binding domain GII85_19300 PF02225 PA domain GII85_19300 PF05922 Peptidase inhibitor I9 GII85_19300 PF00082 Subtilase family GII85_19300 PF13860 FlgD Ig-like domain GII85_19305 PF00296 Luciferase-like monooxygenase GII85_19310 PF00881 Nitroreductase family GII85_19315 PF01098 Cell cycle protein GII85_19320 PF17368 Spore morphogenesis and germination YwcE GII85_19325 PF03626 Prokaryotic Cytochrome C oxidase subunit IV GII85_19330 PF00510 Cytochrome c oxidase subunit III GII85_19335 PF00115 Cytochrome C and Quinol oxidase polypeptide I GII85_19340 PF00116 Cytochrome C oxidase subunit II, periplasmic domain GII85_19340 PF02790 Cytochrome C oxidase subunit II, transmembrane domain GII85_19345 PF04226 Transglycosylase associated protein GII85_19350 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain GII85_19350 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain GII85_19355 PF00288 GHMP kinases N terminal domain GII85_19355 PF08544 GHMP kinases C terminal GII85_19355 PF10509 Galactokinase galactose-binding signature GII85_19360 PF04138 GtrA-like protein GII85_19365 PF00440 Bacterial regulatory proteins, tetR family GII85_19370 PF08671 Anti-repressor SinI GII85_19375 PF04341 Protein of unknown function, DUF485 GII85_19380 PF00474 Sodium:solute symporter family GII85_19385 PF01323 DSBA-like thioredoxin domain GII85_19390 PF10518 TAT (twin-arginine translocation) pathway signal sequence GII85_19390 PF04261 Dyp-type peroxidase family GII85_19395 PF09375 Imelysin GII85_19400 PF03239 Iron permease FTR1 family GII85_19405 PF02581 Thiamine monophosphate synthase GII85_19410 PF02110 Hydroxyethylthiazole kinase family GII85_19415 PF03466 LysR substrate binding domain GII85_19415 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GII85_19420 PF03788 LrgA family GII85_19425 PF04172 LrgB-like family GII85_19430 PF12832 MFS_1 like family GII85_19435 PF09962 Uncharacterized conserved protein (DUF2196) GII85_19440 PF10672 S-adenosylmethionine-dependent methyltransferase GII85_19440 PF17785 PUA-like domain GII85_19445 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily GII85_19460 PF02378 Phosphotransferase system, EIIC GII85_19465 PF00082 Subtilase family GII85_19470 PF02378 Phosphotransferase system, EIIC GII85_19470 PF00367 phosphotransferase system, EIIB GII85_19475 PF03123 CAT RNA binding domain GII85_19475 PF00874 PRD domain GII85_19480 PF01501 Glycosyl transferase family 8 GII85_19485 PF09529 Integral membrane protein (intg_mem_TP0381) GII85_19490 PF01047 MarR family GII85_19495 PF00579 tRNA synthetases class I (W and Y) GII85_19495 PF01479 S4 domain GII85_19500 PF02225 PA domain GII85_19500 PF04389 Peptidase family M28 GII85_19515 PF07690 Major Facilitator Superfamily GII85_19520 PF04607 Region found in RelA / SpoT proteins GII85_19525 PF01040 UbiA prenyltransferase family GII85_19535 PF12459 D-Ala-teichoic acid biosynthesis protein GII85_19540 PF13193 AMP-binding enzyme C-terminal domain GII85_19540 PF00501 AMP-binding enzyme GII85_19545 PF03062 MBOAT, membrane-bound O-acyltransferase family GII85_19550 PF00550 Phosphopantetheine attachment site GII85_19555 PF04914 DltD protein GII85_19560 PF00106 short chain dehydrogenase GII85_19565 PF01063 Amino-transferase class IV GII85_19570 PF02056 Family 4 glycosyl hydrolase GII85_19570 PF11975 Family 4 glycosyl hydrolase C-terminal domain GII85_19575 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit GII85_19580 PF02378 Phosphotransferase system, EIIC GII85_19585 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit GII85_19590 PF08279 HTH domain GII85_19590 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 GII85_19590 PF00874 PRD domain GII85_19590 PF05043 Mga helix-turn-helix domain GII85_19600 PF02245 Methylpurine-DNA glycosylase (MPG) GII85_19605 PF06628 Catalase-related immune-responsive GII85_19605 PF00199 Catalase GII85_19610 PF07690 Major Facilitator Superfamily GII85_19615 PF12679 ABC-2 family transporter protein GII85_19620 PF13732 Domain of unknown function (DUF4162) GII85_19620 PF00005 ABC transporter GII85_19625 PF13396 Phospholipase_D-nuclease N-terminal GII85_19635 PF17280 Family of unknown function (DUF5345) GII85_19640 PF04542 Sigma-70 region 2 GII85_19640 PF08281 Sigma-70, region 4 GII85_19645 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin GII85_19650 PF01256 Carbohydrate kinase GII85_19655 PF00664 ABC transporter transmembrane region GII85_19655 PF00005 ABC transporter GII85_19660 PF00664 ABC transporter transmembrane region GII85_19660 PF00005 ABC transporter GII85_19665 PF02322 Cytochrome bd terminal oxidase subunit II GII85_19670 PF01654 Cytochrome bd terminal oxidase subunit I GII85_19675 PF03390 2-hydroxycarboxylate transporter family GII85_19680 PF01435 Peptidase family M48 GII85_19690 PF01522 Polysaccharide deacetylase GII85_19695 PF02368 Bacterial Ig-like domain (group 2) GII85_19705 PF00005 ABC transporter GII85_19705 PF03459 TOBE domain GII85_19705 PF17912 MalK OB fold domain GII85_19710 PF13556 PucR C-terminal helix-turn-helix domain GII85_19715 PF00171 Aldehyde dehydrogenase family GII85_19720 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) GII85_19720 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 GII85_19725 PF11611 Domain of unknown function (DUF4352) GII85_19730 PF16363 GDP-mannose 4,6 dehydratase GII85_19735 PF01161 Phosphatidylethanolamine-binding protein GII85_19740 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GII85_19740 PF03466 LysR substrate binding domain GII85_19750 PF07730 Histidine kinase GII85_19755 PF00072 Response regulator receiver domain GII85_19755 PF00196 Bacterial regulatory proteins, luxR family GII85_19760 PF01546 Peptidase family M20/M25/M40 GII85_19760 PF07687 Peptidase dimerisation domain GII85_19770 PF04525 LURP-one-related GII85_19775 PF01717 Cobalamin-independent synthase, Catalytic domain GII85_19780 PF01717 Cobalamin-independent synthase, Catalytic domain GII85_19790 PF01144 Coenzyme A transferase GII85_19795 PF01144 Coenzyme A transferase GII85_19805 PF08241 Methyltransferase domain GII85_19810 PF01773 Na+ dependent nucleoside transporter N-terminus GII85_19810 PF07662 Na+ dependent nucleoside transporter C-terminus GII85_19825 PF00199 Catalase GII85_19825 PF06628 Catalase-related immune-responsive GII85_19825 PF18011 C-terminal domain found in long catalases GII85_19830 PF03600 Citrate transporter GII85_19835 PF00722 Glycosyl hydrolases family 16 GII85_19840 PF03123 CAT RNA binding domain GII85_19840 PF00874 PRD domain GII85_19850 PF11700 Vacuole effluxer Atg22 like GII85_19855 PF00271 Helicase conserved C-terminal domain GII85_19855 PF00270 DEAD/DEAH box helicase GII85_19855 PF03880 DbpA RNA binding domain GII85_19860 PF13472 GDSL-like Lipase/Acylhydrolase family GII85_19875 PF14176 YxiJ-like protein GII85_19880 PF10898 Protein of unknown function (DUF2716) GII85_19905 PF05593 RHS Repeat GII85_19910 PF00892 EamA-like transporter family GII85_19915 PF00582 Universal stress protein family GII85_19920 PF00232 Glycosyl hydrolase family 1 GII85_19925 PF00367 phosphotransferase system, EIIB GII85_19925 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 GII85_19925 PF02378 Phosphotransferase system, EIIC GII85_19965 PF16888 Domain of unknown function (DUF5082) GII85_19970 PF04616 Glycosyl hydrolases family 43 GII85_19970 PF16369 C-terminal lipocalin-like domain GII85_19980 PF09021 HutP GII85_19985 PF00221 Aromatic amino acid lyase GII85_19990 PF17391 Urocanase N-terminal domain GII85_19990 PF17392 Urocanase C-terminal domain GII85_19990 PF01175 Urocanase Rossmann-like domain GII85_19995 PF01979 Amidohydrolase family GII85_20000 PF00491 Arginase family GII85_20005 PF00324 Amino acid permease GII85_20010 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain GII85_20010 PF00591 Glycosyl transferase family, a/b domain GII85_20010 PF02885 Glycosyl transferase family, helical bundle domain GII85_20015 PF07662 Na+ dependent nucleoside transporter C-terminus GII85_20015 PF01773 Na+ dependent nucleoside transporter N-terminus GII85_20020 PF01791 DeoC/LacD family aldolase GII85_20025 PF04198 Putative sugar-binding domain GII85_20030 PF06724 Domain of Unknown Function (DUF1206) GII85_20035 PF04346 Ethanolamine utilisation protein, EutH GII85_20040 PF03972 MmgE/PrpD family GII85_20050 PF00005 ABC transporter GII85_20055 PF00528 Binding-protein-dependent transport system inner membrane component GII85_20060 PF00497 Bacterial extracellular solute-binding proteins, family 3 GII85_20075 PF02275 Linear amide C-N hydrolases, choloylglycine hydrolase family GII85_20090 PF11631 Protein of unknown function (DUF3255) GII85_20110 PF01497 Periplasmic binding protein GII85_20115 PF06486 Protein of unknown function (DUF1093) GII85_20120 PF02687 FtsX-like permease family GII85_20125 PF00005 ABC transporter GII85_20130 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GII85_20135 PF00486 Transcriptional regulatory protein, C terminal GII85_20135 PF00072 Response regulator receiver domain GII85_20140 PF01116 Fructose-bisphosphate aldolase class-II GII85_20145 PF01261 Xylose isomerase-like TIM barrel GII85_20150 PF01261 Xylose isomerase-like TIM barrel GII85_20155 PF01408 Oxidoreductase family, NAD-binding Rossmann fold GII85_20155 PF02894 Oxidoreductase family, C-terminal alpha/beta domain GII85_20160 PF07690 Major Facilitator Superfamily GII85_20165 PF01261 Xylose isomerase-like TIM barrel GII85_20170 PF00205 Thiamine pyrophosphate enzyme, central domain GII85_20170 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain GII85_20170 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain GII85_20175 PF00294 pfkB family carbohydrate kinase GII85_20180 PF04962 KduI/IolB family GII85_20185 PF00171 Aldehyde dehydrogenase family GII85_20190 PF08220 DeoR-like helix-turn-helix domain GII85_20190 PF00455 DeoR C terminal sensor domain GII85_20195 PF00248 Aldo/keto reductase family GII85_20205 PF10850 Protein of unknown function (DUF2653) GII85_20210 PF00083 Sugar (and other) transporter GII85_20215 PF00183 Hsp90 protein GII85_20240 PF00664 ABC transporter transmembrane region GII85_20240 PF00005 ABC transporter GII85_20240 PF03412 Peptidase C39 family GII85_20250 PF00440 Bacterial regulatory proteins, tetR family GII85_20255 PF00171 Aldehyde dehydrogenase family GII85_20260 PF06271 RDD family GII85_20265 PF13360 PQQ-like domain GII85_20265 PF13570 PQQ-like domain GII85_20265 PF01011 PQQ enzyme repeat GII85_20270 PF17369 Family of unknown function (DUF5391) GII85_20275 PF06271 RDD family GII85_20280 PF04235 Protein of unknown function (DUF418) GII85_20285 PF07883 Cupin domain GII85_20290 PF00440 Bacterial regulatory proteins, tetR family GII85_20295 PF00106 short chain dehydrogenase GII85_20300 PF01047 MarR family GII85_20305 PF03788 LrgA family GII85_20310 PF04172 LrgB-like family GII85_20315 PF04230 Polysaccharide pyruvyl transferase GII85_20320 PF02595 Glycerate kinase family GII85_20325 PF00392 Bacterial regulatory proteins, gntR family GII85_20325 PF07729 FCD domain GII85_20330 PF00370 FGGY family of carbohydrate kinases, N-terminal domain GII85_20330 PF02782 FGGY family of carbohydrate kinases, C-terminal domain GII85_20335 PF02447 GntP family permease GII85_20340 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase GII85_20340 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain GII85_20345 PF00578 AhpC/TSA family GII85_20350 PF07992 Pyridine nucleotide-disulphide oxidoreductase GII85_20350 PF13192 Thioredoxin domain GII85_20360 PF00232 Glycosyl hydrolase family 1 GII85_20375 PF00392 Bacterial regulatory proteins, gntR family GII85_20375 PF07702 UTRA domain GII85_20390 PF00005 ABC transporter GII85_20400 PF04055 Radical SAM superfamily GII85_20410 PF06874 Firmicute fructose-1,6-bisphosphatase GII85_20415 PF04851 Type III restriction enzyme, res subunit GII85_20415 PF08774 VRR-NUC domain GII85_20420 PF01555 DNA methylase GII85_20420 PF18273 Type III R-M EcoP15I C-terminal domain GII85_20430 PF00580 UvrD/REP helicase N-terminal domain GII85_20430 PF13361 UvrD-like helicase C-terminal domain GII85_20435 PF02590 Predicted SPOUT methyltransferase GII85_20440 PF14116 YyzF-like protein GII85_20450 PF08240 Alcohol dehydrogenase GroES-like domain GII85_20450 PF00107 Zinc-binding dehydrogenase GII85_20460 PF10852 Protein of unknown function (DUF2651) GII85_20475 PF00583 Acetyltransferase (GNAT) family GII85_20480 PF18801 response regulator aspartate phosphatase H, N terminal GII85_20490 PF00491 Arginase family GII85_20495 PF00324 Amino acid permease GII85_20500 PF00202 Aminotransferase class-III GII85_20505 PF00158 Sigma-54 interaction domain GII85_20505 PF13426 PAS domain GII85_20505 PF02954 Bacterial regulatory protein, Fis family GII85_20520 PF13180 PDZ domain GII85_20525 PF00753 Metallo-beta-lactamase superfamily GII85_20530 PF09648 YycH protein GII85_20535 PF07435 YycH protein GII85_20540 PF13426 PAS domain GII85_20540 PF00512 His Kinase A (phospho-acceptor) domain GII85_20540 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GII85_20540 PF00672 HAMP domain GII85_20545 PF00486 Transcriptional regulatory protein, C terminal GII85_20545 PF00072 Response regulator receiver domain GII85_20570 PF00709 Adenylosuccinate synthetase GII85_20575 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily GII85_20580 PF00772 DnaB-like helicase N terminal domain GII85_20580 PF03796 DnaB-like helicase C terminal domain GII85_20585 PF09954 Uncharacterized protein conserved in bacteria (DUF2188) GII85_20595 PF14174 YycC-like protein GII85_20600 PF07690 Major Facilitator Superfamily GII85_20605 PF13231 Dolichyl-phosphate-mannose-protein mannosyltransferase GII85_20610 PF03948 Ribosomal protein L9, C-terminal domain GII85_20610 PF01281 Ribosomal protein L9, N-terminal domain GII85_20615 PF02272 DHHA1 domain GII85_20615 PF01368 DHH family GII85_20620 PF09991 Predicted membrane protein (DUF2232) GII85_20630 PF07875 Coat F domain GII85_20635 PF01638 HxlR-like helix-turn-helix GII85_20640 PF01368 DHH family GII85_20640 PF02833 DHHA2 domain GII85_20650 PF07690 Major Facilitator Superfamily GII85_20655 PF13411 MerR HTH family regulatory protein GII85_20655 PF06445 GyrI-like small molecule binding domain GII85_20665 PF13474 SnoaL-like domain GII85_20670 PF00805 Pentapeptide repeats (8 copies) GII85_20675 PF07690 Major Facilitator Superfamily GII85_20680 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GII85_20680 PF03466 LysR substrate binding domain GII85_20685 PF13673 Acetyltransferase (GNAT) domain GII85_20695 PF00753 Metallo-beta-lactamase superfamily GII85_20700 PF01047 MarR family GII85_20705 PF13673 Acetyltransferase (GNAT) domain GII85_20715 PF00583 Acetyltransferase (GNAT) family GII85_20720 PF04237 YjbR GII85_20725 PF01872 RibD C-terminal domain GII85_20745 PF13411 MerR HTH family regulatory protein GII85_20750 PF00892 EamA-like transporter family GII85_20755 PF03190 Protein of unknown function, DUF255 GII85_20760 PF02517 CPBP intramembrane metalloprotease GII85_20765 PF00083 Sugar (and other) transporter GII85_20770 PF12464 Maltose acetyltransferase GII85_20770 PF14602 Hexapeptide repeat of succinyl-transferase GII85_20775 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily GII85_20780 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family GII85_20780 PF00356 Bacterial regulatory proteins, lacI family GII85_20785 PF03372 Endonuclease/Exonuclease/phosphatase family GII85_20790 PF01084 Ribosomal protein S18 GII85_20795 PF00436 Single-strand binding protein family GII85_20800 PF01250 Ribosomal protein S6 GII85_20805 PF01926 50S ribosome-binding GTPase GII85_20805 PF06071 Protein of unknown function (DUF933) GII85_20810 PF04879 Molybdopterin oxidoreductase Fe4S4 domain GII85_20810 PF00384 Molybdopterin oxidoreductase GII85_20810 PF01568 Molydopterin dinucleotide binding domain GII85_20815 PF06107 Bacterial protein of unknown function (DUF951) GII85_20825 PF06866 Protein of unknown function (DUF1256) GII85_20830 PF02195 ParB-like nuclease domain GII85_20830 PF17762 HTH domain found in ParB protein GII85_20835 PF13614 AAA domain GII85_20840 PF06713 Bacterial PH domain GII85_20845 PF02195 ParB-like nuclease domain GII85_20845 PF17762 HTH domain found in ParB protein GII85_20850 PF02527 rRNA small subunit methyltransferase G GII85_20855 PF13932 GidA associated domain GII85_20855 PF01134 Glucose inhibited division protein A GII85_20860 PF10396 GTP-binding protein TrmE N-terminus GII85_20860 PF12631 MnmE helical domain GII85_20860 PF01926 50S ribosome-binding GTPase GII85_20865 PF01424 R3H domain GII85_20865 PF14804 Jag N-terminus GII85_20870 PF02096 60Kd inner membrane protein GII85_20875 PF00825 Ribonuclease P GII85_20880 PF00468 Ribosomal protein L34