locus-tag class description GII87_00005 PF11638 DnaA N-terminal domain GII87_00005 PF08299 Bacterial dnaA protein helix-turn-helix GII87_00005 PF00308 Bacterial dnaA protein GII87_00010 PF02768 DNA polymerase III beta subunit, C-terminal domain GII87_00010 PF00712 DNA polymerase III beta subunit, N-terminal domain GII87_00010 PF02767 DNA polymerase III beta subunit, central domain GII87_00020 PF02463 RecF/RecN/SMC N terminal domain GII87_00025 PF04025 Domain of unknown function (DUF370) GII87_00030 PF00986 DNA gyrase B subunit, carboxyl terminus GII87_00030 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GII87_00030 PF00204 DNA gyrase B GII87_00030 PF01751 Toprim domain GII87_00035 PF03989 DNA gyrase C-terminal domain, beta-propeller GII87_00035 PF00521 DNA gyrase/topoisomerase IV, subunit A GII87_00065 PF14175 YaaC-like Protein GII87_00070 PF00478 IMP dehydrogenase / GMP reductase domain GII87_00070 PF00571 CBS domain GII87_00075 PF07943 Penicillin-binding protein 5, C-terminal domain GII87_00075 PF00768 D-alanyl-D-alanine carboxypeptidase GII87_00080 PF01680 SOR/SNZ family GII87_00085 PF01174 SNO glutamine amidotransferase family GII87_00090 PF02403 Seryl-tRNA synthetase N-terminal domain GII87_00090 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) GII87_00100 PF01712 Deoxynucleoside kinase GII87_00105 PF01712 Deoxynucleoside kinase GII87_00110 PF01476 LysM domain GII87_00110 PF00704 Glycosyl hydrolases family 18 GII87_00115 PF00857 Isochorismatase family GII87_00120 PF14437 MafB19-like deaminase GII87_00130 PF12169 DNA polymerase III subunits gamma and tau domain III GII87_00135 PF02575 YbaB/EbfC DNA-binding family GII87_00140 PF02132 RecR protein GII87_00140 PF13662 Toprim domain GII87_00145 PF10704 Protein of unknown function (DUF2508) GII87_00150 PF07441 SigmaK-factor processing regulatory protein BofA GII87_00180 PF10764 Inhibitor of sigma-G Gin GII87_00185 PF10112 5-bromo-4-chloroindolyl phosphate hydrolysis protein GII87_00190 PF05816 Toxic anion resistance protein (TelA) GII87_00195 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain GII87_00195 PF01276 Orn/Lys/Arg decarboxylase, major domain GII87_00200 PF02223 Thymidylate kinase GII87_00205 PF06153 Cyclic-di-AMP receptor GII87_00210 PF03885 Protein of unknown function (DUF327) GII87_00215 PF09115 DNA polymerase III, delta subunit, C terminal GII87_00220 PF04468 PSP1 C-terminal conserved region GII87_00225 PF06156 Initiation control protein YabA GII87_00230 PF05175 Methyltransferase small domain GII87_00235 PF01541 GIY-YIG catalytic domain GII87_00240 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases GII87_00245 PF18277 AbrB C-terminal domain GII87_00245 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin GII87_00250 PF01588 Putative tRNA binding domain GII87_00250 PF09334 tRNA synthetases class I (M) GII87_00250 PF08264 Anticodon-binding domain of tRNA GII87_00255 PF01026 TatD related DNase GII87_00260 PF03990 G5-linked-Ubiquitin-like domain GII87_00260 PF06725 3D domain GII87_00260 PF07501 G5 domain GII87_00265 PF13331 Domain of unknown function (DUF4093) GII87_00265 PF13662 Toprim domain GII87_00270 PF00398 Ribosomal RNA adenine dimethylase GII87_00275 PF05582 YabG peptidase U57 GII87_00280 PF06257 Biofilm formation stimulator VEG GII87_00285 PF00269 Small, acid-soluble spore proteins, alpha/beta type GII87_00290 PF00288 GHMP kinases N terminal domain GII87_00290 PF08544 GHMP kinases C terminal GII87_00295 PF00156 Phosphoribosyl transferase domain GII87_00295 PF09182 Bacterial purine repressor, N-terminal GII87_00300 PF01042 Endoribonuclease L-PSP GII87_00305 PF04026 SpoVG GII87_00310 PF00483 Nucleotidyl transferase GII87_00310 PF00132 Bacterial transferase hexapeptide (six repeats) GII87_00315 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase GII87_00315 PF14572 Phosphoribosyl synthetase-associated domain GII87_00320 PF14693 Ribosomal protein TL5, C-terminal domain GII87_00320 PF01386 Ribosomal L25p family GII87_00325 PF01195 Peptidyl-tRNA hydrolase GII87_00330 PF10955 Protein of unknown function (DUF2757) GII87_00335 PF17757 UvrB interaction domain GII87_00335 PF02559 CarD-like/TRCF domain GII87_00335 PF00270 DEAD/DEAH box helicase GII87_00335 PF00271 Helicase conserved C-terminal domain GII87_00335 PF03461 TRCF domain GII87_00340 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin GII87_00340 PF15714 Stage V sporulation protein T C-terminal, transcription factor GII87_00345 PF01943 Polysaccharide biosynthesis protein GII87_00345 PF14667 Polysaccharide biosynthesis C-terminal domain GII87_00350 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases GII87_00350 PF03819 MazG nucleotide pyrophosphohydrolase domain GII87_00355 PF01479 S4 domain GII87_00360 PF07873 YabP family GII87_00365 PF09578 Spore cortex protein YabQ (Spore_YabQ) GII87_00370 PF04977 Septum formation initiator GII87_00375 PF00575 S1 RNA binding domain GII87_00390 PF07228 Stage II sporulation protein E (SpoIIE) GII87_00395 PF00092 von Willebrand factor type A domain GII87_00400 PF00069 Protein kinase domain GII87_00405 PF09179 TilS substrate binding domain GII87_00405 PF01171 PP-loop family GII87_00405 PF11734 TilS substrate C-terminal domain GII87_00415 PF01434 Peptidase family M41 GII87_00415 PF06480 FtsH Extracellular GII87_00415 PF00004 ATPase family associated with various cellular activities (AAA) GII87_00415 PF17862 AAA+ lid domain GII87_00420 PF03309 Type III pantothenate kinase GII87_00425 PF01430 Hsp33 protein GII87_00430 PF13145 PPIC-type PPIASE domain GII87_00435 PF00291 Pyridoxal-phosphate dependent enzyme GII87_00440 PF04715 Anthranilate synthase component I, N terminal region GII87_00440 PF00425 chorismate binding enzyme GII87_00445 PF00117 Glutamine amidotransferase class-I GII87_00450 PF01063 Amino-transferase class IV GII87_00455 PF00809 Pterin binding enzyme GII87_00460 PF02152 Dihydroneopterin aldolase GII87_00465 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) GII87_00470 PF01381 Helix-turn-helix GII87_00475 PF01207 Dihydrouridine synthase (Dus) GII87_00480 PF00152 tRNA synthetases class II (D, K and N) GII87_00480 PF01336 OB-fold nucleic acid binding domain GII87_00560 PF05848 CtsR N-terminal HTH domain GII87_00560 PF17727 CtsR C-terminal dimerization domain GII87_00565 PF02151 UvrB/uvrC motif GII87_00570 PF00217 ATP:guanido phosphotransferase, C-terminal catalytic domain GII87_00575 PF07724 AAA domain (Cdc48 subfamily) GII87_00575 PF10431 C-terminal, D2-small domain, of ClpB protein GII87_00575 PF00004 ATPase family associated with various cellular activities (AAA) GII87_00575 PF02861 Clp amino terminal domain, pathogenicity island component GII87_00575 PF17871 AAA lid domain GII87_00580 PF18073 Rubredoxin metal binding domain GII87_00585 PF02457 DisA bacterial checkpoint controller nucleotide-binding GII87_00585 PF10635 DisA bacterial checkpoint controller linker region GII87_00595 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase GII87_00600 PF02542 YgbB family GII87_00605 PF00749 tRNA synthetases class I (E and Q), catalytic domain GII87_00610 PF06426 Serine acetyltransferase, N-terminal GII87_00610 PF00132 Bacterial transferase hexapeptide (six repeats) GII87_00615 PF09190 DALR domain GII87_00615 PF01406 tRNA synthetases class I (C) catalytic domain GII87_00620 PF00636 Ribonuclease III domain GII87_00625 PF00588 SpoU rRNA Methylase family GII87_00625 PF08032 RNA 2'-O ribose methyltransferase substrate binding GII87_00630 PF05991 YacP-like NYN domain GII87_00635 PF08281 Sigma-70, region 4 GII87_00635 PF04542 Sigma-70 region 2 GII87_00640 PF00471 Ribosomal protein L33 GII87_00645 PF00584 SecE/Sec61-gamma subunits of protein translocation complex GII87_00650 PF00467 KOW motif GII87_00650 PF02357 Transcription termination factor nusG GII87_00655 PF00298 Ribosomal protein L11, RNA binding domain GII87_00655 PF03946 Ribosomal protein L11, N-terminal domain GII87_00660 PF00687 Ribosomal protein L1p/L10e family GII87_00665 PF00466 Ribosomal protein L10 GII87_00670 PF00542 Ribosomal protein L7/L12 C-terminal domain GII87_00670 PF16320 Ribosomal protein L7/L12 dimerisation domain GII87_00675 PF05175 Methyltransferase small domain GII87_00680 PF04561 RNA polymerase Rpb2, domain 2 GII87_00680 PF04560 RNA polymerase Rpb2, domain 7 GII87_00680 PF04565 RNA polymerase Rpb2, domain 3 GII87_00680 PF04563 RNA polymerase beta subunit GII87_00680 PF10385 RNA polymerase beta subunit external 1 domain GII87_00680 PF00562 RNA polymerase Rpb2, domain 6 GII87_00685 PF05000 RNA polymerase Rpb1, domain 4 GII87_00685 PF04998 RNA polymerase Rpb1, domain 5 GII87_00685 PF04983 RNA polymerase Rpb1, domain 3 GII87_00685 PF04997 RNA polymerase Rpb1, domain 1 GII87_00685 PF00623 RNA polymerase Rpb1, domain 2 GII87_00690 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family GII87_00695 PF00164 Ribosomal protein S12/S23 GII87_00700 PF00177 Ribosomal protein S7p/S5e GII87_00705 PF00679 Elongation factor G C-terminus GII87_00705 PF03764 Elongation factor G, domain IV GII87_00705 PF00009 Elongation factor Tu GTP binding domain GII87_00705 PF03144 Elongation factor Tu domain 2 GII87_00705 PF14492 Elongation Factor G, domain II GII87_00710 PF03143 Elongation factor Tu C-terminal domain GII87_00710 PF03144 Elongation factor Tu domain 2 GII87_00710 PF00009 Elongation factor Tu GTP binding domain GII87_00715 PF12146 Serine aminopeptidase, S33 GII87_00720 PF00338 Ribosomal protein S10p/S20e GII87_00725 PF00297 Ribosomal protein L3 GII87_00730 PF00573 Ribosomal protein L4/L1 family GII87_00735 PF00276 Ribosomal protein L23 GII87_00740 PF03947 Ribosomal Proteins L2, C-terminal domain GII87_00740 PF00181 Ribosomal Proteins L2, RNA binding domain GII87_00745 PF00203 Ribosomal protein S19 GII87_00750 PF00237 Ribosomal protein L22p/L17e GII87_00755 PF00189 Ribosomal protein S3, C-terminal domain GII87_00755 PF07650 KH domain GII87_00760 PF00252 Ribosomal protein L16p/L10e GII87_00765 PF00831 Ribosomal L29 protein GII87_00770 PF00366 Ribosomal protein S17 GII87_00775 PF00238 Ribosomal protein L14p/L23e GII87_00780 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 GII87_00780 PF00467 KOW motif GII87_00785 PF00673 ribosomal L5P family C-terminus GII87_00785 PF00281 Ribosomal protein L5 GII87_00790 PF00253 Ribosomal protein S14p/S29e GII87_00795 PF00410 Ribosomal protein S8 GII87_00800 PF00347 Ribosomal protein L6 GII87_00805 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast GII87_00810 PF03719 Ribosomal protein S5, C-terminal domain GII87_00810 PF00333 Ribosomal protein S5, N-terminal domain GII87_00815 PF00327 Ribosomal protein L30p/L7e GII87_00820 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A GII87_00825 PF00344 SecY translocase GII87_00830 PF05191 Adenylate kinase, active site lid GII87_00835 PF00557 Metallopeptidase family M24 GII87_00845 PF01176 Translation initiation factor 1A / IF-1 GII87_00850 PF00444 Ribosomal protein L36 GII87_00855 PF00416 Ribosomal protein S13/S18 GII87_00860 PF00411 Ribosomal protein S11 GII87_00865 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain GII87_00865 PF01000 RNA polymerase Rpb3/RpoA insert domain GII87_00865 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain GII87_00870 PF01196 Ribosomal protein L17 GII87_00875 PF00005 ABC transporter GII87_00880 PF00005 ABC transporter GII87_00885 PF02361 Cobalt transport protein GII87_00890 PF01416 tRNA pseudouridine synthase GII87_00895 PF00572 Ribosomal protein L13 GII87_00900 PF00380 Ribosomal protein S9/S16 GII87_00905 PF08241 Methyltransferase domain GII87_00910 PF10730 Protein of unknown function (DUF2521) GII87_00915 PF01520 N-acetylmuramoyl-L-alanine amidase GII87_00920 PF10609 NUBPL iron-transfer P-loop NTPase GII87_00925 PF17898 Spore germination GerD central core domain GII87_00930 PF14089 KinB-signalling pathway activation in sporulation GII87_00935 PF01522 Polysaccharide deacetylase GII87_01020 PF00916 Sulfate permease family GII87_01020 PF01740 STAS domain GII87_01025 PF01758 Sodium Bile acid symporter family GII87_01030 PF00756 Putative esterase GII87_01035 PF01032 FecCD transport family GII87_01040 PF01032 FecCD transport family GII87_01045 PF01497 Periplasmic binding protein GII87_01050 PF01497 Periplasmic binding protein GII87_01050 PF12833 Helix-turn-helix domain GII87_01055 PF07075 Protein of unknown function (DUF1343) GII87_01060 PF00933 Glycosyl hydrolase family 3 N terminal domain GII87_01060 PF01915 Glycosyl hydrolase family 3 C-terminal domain GII87_01065 PF00144 Beta-lactamase GII87_01070 PF02378 Phosphotransferase system, EIIC GII87_01070 PF00367 phosphotransferase system, EIIB GII87_01075 PF01418 Helix-turn-helix domain, rpiR family GII87_01075 PF01380 SIS domain GII87_01080 PF01380 SIS domain GII87_01090 PF04463 Protein of unknown function (DUF523) GII87_01120 PF08281 Sigma-70, region 4 GII87_01120 PF04542 Sigma-70 region 2 GII87_01125 PF13490 Putative zinc-finger GII87_01130 PF02457 DisA bacterial checkpoint controller nucleotide-binding GII87_01135 PF07949 YbbR-like protein GII87_01140 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I GII87_01140 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain GII87_01140 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III GII87_01140 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II GII87_01145 PF01380 SIS domain GII87_01155 PF00730 HhH-GPD superfamily base excision DNA repair protein GII87_01155 PF07934 8-oxoguanine DNA glycosylase, N-terminal domain GII87_01160 PF12833 Helix-turn-helix domain GII87_01160 PF02805 Metal binding domain of Ada GII87_01165 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain GII87_01165 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain GII87_01170 PF00361 Proton-conducting membrane transporter GII87_01170 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus GII87_01175 PF10070 Uncharacterized protein conserved in bacteria (DUF2309) GII87_01190 PF10057 Uncharacterized conserved protein (DUF2294) GII87_01200 PF07690 Major Facilitator Superfamily GII87_01215 PF04055 Radical SAM superfamily GII87_01215 PF13186 Iron-sulfur cluster-binding domain GII87_01220 PF02517 CPBP intramembrane metalloprotease GII87_01225 PF00005 ABC transporter GII87_01240 PF13905 Thioredoxin-like GII87_01245 PF00561 alpha/beta hydrolase fold GII87_01250 PF00072 Response regulator receiver domain GII87_01250 PF00486 Transcriptional regulatory protein, C terminal GII87_01255 PF00672 HAMP domain GII87_01255 PF00512 His Kinase A (phospho-acceptor) domain GII87_01265 PF00069 Protein kinase domain GII87_01275 PF16226 Domain of unknown function (DUF4885) GII87_01280 PF00324 Amino acid permease GII87_01285 PF17334 Minor curli fiber component A GII87_01290 PF17340 Family of unknown function (DUF5370) GII87_01295 PF00905 Penicillin binding protein transpeptidase domain GII87_01300 PF00067 Cytochrome P450 GII87_01310 PF13520 Amino acid permease GII87_01315 PF03009 Glycerophosphoryl diester phosphodiesterase family GII87_01320 PF07690 Major Facilitator Superfamily GII87_01325 PF10852 Protein of unknown function (DUF2651) GII87_01330 PF00583 Acetyltransferase (GNAT) family GII87_01330 PF01047 MarR family GII87_01335 PF07690 Major Facilitator Superfamily GII87_01350 PF08924 Domain of unknown function (DUF1906) GII87_01350 PF01471 Putative peptidoglycan binding domain GII87_01355 PF00892 EamA-like transporter family GII87_01360 PF12833 Helix-turn-helix domain GII87_01360 PF02311 AraC-like ligand binding domain GII87_01365 PF02222 ATP-grasp domain GII87_01370 PF00089 Trypsin GII87_01375 PF10794 Protein of unknown function (DUF2606) GII87_01380 PF12697 Alpha/beta hydrolase family GII87_01385 PF01066 CDP-alcohol phosphatidyltransferase GII87_01390 PF09335 SNARE associated Golgi protein GII87_01395 PF02666 Phosphatidylserine decarboxylase GII87_01405 PF05139 Erythromycin esterase GII87_01410 PF12833 Helix-turn-helix domain GII87_01420 PF00375 Sodium:dicarboxylate symporter family GII87_01425 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 GII87_01425 PF00367 phosphotransferase system, EIIB GII87_01425 PF02378 Phosphotransferase system, EIIC GII87_01430 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase GII87_01440 PF07853 Protein of unknown function (DUF1648) GII87_01445 PF01063 Amino-transferase class IV GII87_01450 PF00324 Amino acid permease GII87_01455 PF02574 Homocysteine S-methyltransferase GII87_01465 PF01235 Sodium:alanine symporter family GII87_01470 PF04960 Glutaminase GII87_01475 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GII87_01480 PF08664 YcbB domain GII87_01480 PF00072 Response regulator receiver domain GII87_01485 PF00701 Dihydrodipicolinate synthetase family GII87_01490 PF00171 Aldehyde dehydrogenase family GII87_01495 PF07690 Major Facilitator Superfamily GII87_01500 PF13378 Enolase C-terminal domain-like GII87_01505 PF07729 FCD domain GII87_01505 PF00392 Bacterial regulatory proteins, gntR family GII87_01510 PF08666 SAF domain GII87_01510 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus GII87_01515 PF01636 Phosphotransferase enzyme family GII87_01520 PF15777 Tryptophan RNA-binding attenuator protein inhibitory protein GII87_01525 PF00892 EamA-like transporter family GII87_01530 PF00486 Transcriptional regulatory protein, C terminal GII87_01530 PF00072 Response regulator receiver domain GII87_01535 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GII87_01535 PF00512 His Kinase A (phospho-acceptor) domain GII87_01540 PF00005 ABC transporter GII87_01555 PF10710 Protein of unknown function (DUF2512) GII87_01560 PF07486 Cell Wall Hydrolase GII87_01565 PF10138 vWA found in TerF C terminus GII87_01575 PF09423 PhoD-like phosphatase GII87_01575 PF16655 PhoD-like phosphatase, N-terminal domain GII87_01580 PF02416 mttA/Hcf106 family GII87_01585 PF00902 Sec-independent protein translocase protein (TatC) GII87_01590 PF01470 Pyroglutamyl peptidase GII87_01595 PF00266 Aminotransferase class-V GII87_01600 PF07690 Major Facilitator Superfamily GII87_01605 PF00440 Bacterial regulatory proteins, tetR family GII87_01610 PF00710 Asparaginase, N-terminal GII87_01610 PF17763 Glutaminase/Asparaginase C-terminal domain GII87_01615 PF01674 Lipase (class 2) GII87_01620 PF06271 RDD family GII87_01625 PF02810 SEC-C motif GII87_01625 PF05225 helix-turn-helix, Psq domain GII87_01630 PF14501 GHKL domain GII87_01635 PF04397 LytTr DNA-binding domain GII87_01635 PF00072 Response regulator receiver domain GII87_01640 PF00005 ABC transporter GII87_01645 PF12679 ABC-2 family transporter protein GII87_01650 PF00248 Aldo/keto reductase family GII87_01655 PF17118 Domain of unknown function (DUF5105) GII87_01655 PF11611 Domain of unknown function (DUF4352) GII87_01665 PF16244 Domain of unknown function (DUF4901) GII87_01670 PF16244 Domain of unknown function (DUF4901) GII87_01675 PF13539 D-alanyl-D-alanine carboxypeptidase GII87_01680 PF18801 response regulator aspartate phosphatase H, N terminal GII87_01690 PF00128 Alpha amylase, catalytic domain GII87_01695 PF01297 Zinc-uptake complex component A periplasmic GII87_01700 PF00005 ABC transporter GII87_01705 PF00950 ABC 3 transport family GII87_01710 PF00296 Luciferase-like monooxygenase GII87_01720 PF02342 TerD domain GII87_01725 PF02342 TerD domain GII87_01730 PF03741 Integral membrane protein TerC family GII87_01735 PF14266 Putative component of 'biosynthetic module' GII87_01740 PF05816 Toxic anion resistance protein (TelA) GII87_01745 PF07690 Major Facilitator Superfamily GII87_01750 PF07690 Major Facilitator Superfamily GII87_01760 PF00571 CBS domain GII87_01760 PF00005 ABC transporter GII87_01765 PF00528 Binding-protein-dependent transport system inner membrane component GII87_01770 PF04069 Substrate binding domain of ABC-type glycine betaine transport system GII87_01775 PF07687 Peptidase dimerisation domain GII87_01775 PF01546 Peptidase family M20/M25/M40 GII87_01780 PF03606 C4-dicarboxylate anaerobic carrier GII87_01790 PF16738 Starch-binding module 26 GII87_01790 PF00128 Alpha amylase, catalytic domain GII87_01795 PF00056 lactate/malate dehydrogenase, NAD binding domain GII87_01795 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain GII87_01800 PF02652 L-lactate permease GII87_01805 PF07690 Major Facilitator Superfamily GII87_01810 PF01047 MarR family GII87_01815 PF01810 LysE type translocator GII87_01820 PF08892 YqcI/YcgG family GII87_01825 PF00324 Amino acid permease GII87_01830 PF09347 Domain of unknown function (DUF1989) GII87_01835 PF02540 NAD synthase GII87_01845 PF01202 Shikimate kinase GII87_01850 PF08241 Methyltransferase domain GII87_01855 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GII87_01855 PF03466 LysR substrate binding domain GII87_01860 PF05448 Acetyl xylan esterase (AXE1) GII87_01865 PF10127 RNA repair pathway DNA polymerase beta family GII87_01870 PF01619 Proline dehydrogenase GII87_01875 PF00171 Aldehyde dehydrogenase family GII87_01880 PF00474 Sodium:solute symporter family GII87_01885 PF13556 PucR C-terminal helix-turn-helix domain GII87_01885 PF17853 GGDEF-like domain GII87_01890 PF09323 Domain of unknown function (DUF1980) GII87_01895 PF03773 Predicted permease GII87_01900 PF00561 alpha/beta hydrolase fold GII87_01905 PF07992 Pyridine nucleotide-disulphide oxidoreductase GII87_01910 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases GII87_01915 PF00355 Rieske [2Fe-2S] domain GII87_01920 PF18267 Rubredoxin NAD+ reductase C-terminal domain GII87_01920 PF01077 Nitrite and sulphite reductase 4Fe-4S domain GII87_01920 PF04324 BFD-like [2Fe-2S] binding domain GII87_01920 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain GII87_01920 PF07992 Pyridine nucleotide-disulphide oxidoreductase GII87_01925 PF00384 Molybdopterin oxidoreductase GII87_01925 PF04879 Molybdopterin oxidoreductase Fe4S4 domain GII87_01925 PF01568 Molydopterin dinucleotide binding domain GII87_01930 PF18267 Rubredoxin NAD+ reductase C-terminal domain GII87_01930 PF07992 Pyridine nucleotide-disulphide oxidoreductase GII87_01930 PF04324 BFD-like [2Fe-2S] binding domain GII87_01930 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain GII87_01935 PF07690 Major Facilitator Superfamily GII87_01940 PF02649 Type I GTP cyclohydrolase folE2 GII87_01945 PF03734 L,D-transpeptidase catalytic domain GII87_01955 PF07683 Cobalamin synthesis protein cobW C-terminal domain GII87_01955 PF02492 CobW/HypB/UreG, nucleotide-binding domain GII87_01960 PF00528 Binding-protein-dependent transport system inner membrane component GII87_01965 PF00497 Bacterial extracellular solute-binding proteins, family 3 GII87_01975 PF06271 RDD family GII87_01980 PF10925 Protein of unknown function (DUF2680) GII87_01985 PF00232 Glycosyl hydrolase family 1 GII87_01990 PF11033 Competence protein J (ComJ) GII87_01995 PF14040 Deoxyribonuclease NucA/NucB GII87_02000 PF00672 HAMP domain GII87_02000 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GII87_02000 PF17202 Single cache domain 3 GII87_02005 PF01380 SIS domain GII87_02010 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family GII87_02015 PF01638 HxlR-like helix-turn-helix GII87_02020 PF00501 AMP-binding enzyme GII87_02020 PF00550 Phosphopantetheine attachment site GII87_02020 PF00668 Condensation domain GII87_02020 PF13193 AMP-binding enzyme C-terminal domain GII87_02025 PF00550 Phosphopantetheine attachment site GII87_02025 PF00501 AMP-binding enzyme GII87_02025 PF00668 Condensation domain GII87_02025 PF13193 AMP-binding enzyme C-terminal domain GII87_02030 PF00975 Thioesterase domain GII87_02030 PF00550 Phosphopantetheine attachment site GII87_02030 PF00668 Condensation domain GII87_02030 PF13193 AMP-binding enzyme C-terminal domain GII87_02030 PF00501 AMP-binding enzyme GII87_02035 PF00975 Thioesterase domain GII87_02040 PF07690 Major Facilitator Superfamily GII87_02045 PF14317 YcxB-like protein GII87_02050 PF00892 EamA-like transporter family GII87_02055 PF00155 Aminotransferase class I and II GII87_02055 PF00392 Bacterial regulatory proteins, gntR family GII87_02060 PF01648 4'-phosphopantetheinyl transferase superfamily GII87_02070 PF00005 ABC transporter GII87_02075 PF00528 Binding-protein-dependent transport system inner membrane component GII87_02080 PF00497 Bacterial extracellular solute-binding proteins, family 3 GII87_02085 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GII87_02085 PF03466 LysR substrate binding domain GII87_02090 PF02441 Flavoprotein GII87_02095 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase GII87_02110 PF00561 alpha/beta hydrolase fold GII87_02115 PF00854 POT family GII87_02120 PF13229 Right handed beta helix region GII87_02120 PF12708 Pectate lyase superfamily protein GII87_02130 PF03323 Bacillus/Clostridium GerA spore germination protein GII87_02135 PF05504 Spore germination B3/ GerAC like, C-terminal GII87_02140 PF03845 Spore germination protein GII87_02145 PF00005 ABC transporter GII87_02150 PF02687 FtsX-like permease family GII87_02150 PF12704 MacB-like periplasmic core domain GII87_02155 PF00486 Transcriptional regulatory protein, C terminal GII87_02155 PF00072 Response regulator receiver domain GII87_02160 PF00672 HAMP domain GII87_02160 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GII87_02160 PF00512 His Kinase A (phospho-acceptor) domain GII87_02165 PF18801 response regulator aspartate phosphatase H, N terminal GII87_02170 PF11131 Rap-phr extracellular signalling GII87_02175 PF09680 Family of unknown function GII87_02180 PF09680 Family of unknown function GII87_02185 PF13840 ACT domain GII87_02185 PF00696 Amino acid kinase family GII87_02190 PF01032 FecCD transport family GII87_02195 PF01032 FecCD transport family GII87_02200 PF00005 ABC transporter GII87_02205 PF01497 Periplasmic binding protein GII87_02210 PF07690 Major Facilitator Superfamily GII87_02215 PF00440 Bacterial regulatory proteins, tetR family GII87_02220 PF00881 Nitroreductase family GII87_02225 PF03992 Antibiotic biosynthesis monooxygenase GII87_02230 PF01022 Bacterial regulatory protein, arsR family GII87_02235 PF00155 Aminotransferase class I and II GII87_02235 PF00392 Bacterial regulatory proteins, gntR family GII87_02240 PF00202 Aminotransferase class-III GII87_02245 PF00171 Aldehyde dehydrogenase family GII87_02250 PF06800 Sugar transport protein GII87_02260 PF07987 Domain of unkown function (DUF1775) GII87_02265 PF04234 CopC domain GII87_02265 PF13115 YtkA-like GII87_02265 PF05425 Copper resistance protein D GII87_02270 PF05573 NosL GII87_02270 PF08220 DeoR-like helix-turn-helix domain GII87_02280 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit GII87_02280 PF02378 Phosphotransferase system, EIIC GII87_02285 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 GII87_02290 PF08125 Mannitol dehydrogenase C-terminal domain GII87_02290 PF01232 Mannitol dehydrogenase Rossmann domain GII87_02295 PF00180 Isocitrate/isopropylmalate dehydrogenase GII87_02300 PF10502 Signal peptidase, peptidase S26 GII87_02305 PF01738 Dienelactone hydrolase family GII87_02310 PF07977 FabA-like domain GII87_02325 PF03746 LamB/YcsF family GII87_02330 PF01566 Natural resistance-associated macrophage protein GII87_02335 PF07286 Protein of unknown function (DUF1445) GII87_02340 PF02682 Carboxyltransferase domain, subdomain C and D GII87_02345 PF02626 Carboxyltransferase domain, subdomain A and B GII87_02350 PF09339 IclR helix-turn-helix domain GII87_02350 PF01614 Bacterial transcriptional regulator GII87_02355 PF13472 GDSL-like Lipase/Acylhydrolase family GII87_02360 PF13129 Protein of unknown function (DUF3953) GII87_02365 PF03992 Antibiotic biosynthesis monooxygenase GII87_02370 PF03717 Penicillin-binding Protein dimerisation domain GII87_02370 PF00905 Penicillin binding protein transpeptidase domain GII87_02370 PF05223 NTF2-like N-terminal transpeptidase domain GII87_02375 PF00248 Aldo/keto reductase family GII87_02380 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit GII87_02380 PF00874 PRD domain GII87_02380 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 GII87_02380 PF08279 HTH domain GII87_02380 PF05043 Mga helix-turn-helix domain GII87_02385 PF13193 AMP-binding enzyme C-terminal domain GII87_02385 PF00501 AMP-binding enzyme GII87_02390 PF13649 Methyltransferase domain GII87_02405 PF13302 Acetyltransferase (GNAT) domain GII87_02410 PF16242 Pyridoxamine 5'-phosphate oxidase like GII87_02415 PF10997 Alternate to MurJ GII87_02420 PF12823 Domain of unknown function (DUF3817) GII87_02425 PF01037 Lrp/AsnC ligand binding domain GII87_02430 PF01131 DNA topoisomerase GII87_02430 PF01751 Toprim domain GII87_02440 PF00990 Diguanylate cyclase, GGDEF domain GII87_02445 PF10096 Uncharacterized protein conserved in bacteria (DUF2334) GII87_02455 PF03170 Bacterial cellulose synthase subunit GII87_02460 PF13520 Amino acid permease GII87_02465 PF00293 NUDIX domain GII87_02470 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain GII87_02470 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain GII87_02470 PF00205 Thiamine pyrophosphate enzyme, central domain GII87_02485 PF01566 Natural resistance-associated macrophage protein GII87_02490 PF04226 Transglycosylase associated protein GII87_02495 PF09954 Uncharacterized protein conserved in bacteria (DUF2188) GII87_02500 PF12787 EcsC protein family GII87_02505 PF00477 Small hydrophilic plant seed protein GII87_02505 PF10685 Stress-induced bacterial acidophilic repeat motif GII87_02510 PF07883 Cupin domain GII87_02515 PF16291 Domain of unknown function (DUF4937 GII87_02520 PF05067 Manganese containing catalase GII87_02525 PF03480 Bacterial extracellular solute-binding protein, family 7 GII87_02530 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain GII87_02530 PF17203 Single cache domain 3 GII87_02530 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GII87_02535 PF00072 Response regulator receiver domain GII87_02535 PF08279 HTH domain GII87_02540 PF00375 Sodium:dicarboxylate symporter family GII87_02545 PF01594 AI-2E family transporter GII87_02550 PF00005 ABC transporter GII87_02565 PF02771 Acyl-CoA dehydrogenase, N-terminal domain GII87_02565 PF02770 Acyl-CoA dehydrogenase, middle domain GII87_02565 PF08028 Acyl-CoA dehydrogenase, C-terminal domain GII87_02570 PF13040 Fur-regulated basic protein B GII87_02580 PF01545 Cation efflux family GII87_02580 PF16916 Dimerisation domain of Zinc Transporter GII87_02585 PF00085 Thioredoxin GII87_02590 PF01820 D-ala D-ala ligase N-terminus GII87_02590 PF07478 D-ala D-ala ligase C-terminus GII87_02595 PF08245 Mur ligase middle domain GII87_02595 PF02875 Mur ligase family, glutamate ligase domain GII87_02595 PF01225 Mur ligase family, catalytic domain GII87_02600 PF00271 Helicase conserved C-terminal domain GII87_02600 PF00270 DEAD/DEAH box helicase GII87_02605 PF03703 Bacterial PH domain GII87_02610 PF03703 Bacterial PH domain GII87_02615 PF01694 Rhomboid family GII87_02620 PF01648 4'-phosphopantetheinyl transferase superfamily GII87_02630 PF00842 Alanine racemase, C-terminal domain GII87_02630 PF01168 Alanine racemase, N-terminal domain GII87_02635 PF01402 Ribbon-helix-helix protein, copG family GII87_02640 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system GII87_02645 PF08678 Rsbr N terminal GII87_02645 PF01740 STAS domain GII87_02650 PF01740 STAS domain GII87_02655 PF13581 Histidine kinase-like ATPase domain GII87_02660 PF08673 Phosphoserine phosphatase RsbU, N-terminal domain GII87_02660 PF07228 Stage II sporulation protein E (SpoIIE) GII87_02665 PF01740 STAS domain GII87_02670 PF13581 Histidine kinase-like ATPase domain GII87_02675 PF04542 Sigma-70 region 2 GII87_02675 PF04539 Sigma-70 region 3 GII87_02675 PF04545 Sigma-70, region 4 GII87_02680 PF07228 Stage II sporulation protein E (SpoIIE) GII87_02695 PF01878 EVE domain GII87_02700 PF01047 MarR family GII87_02705 PF16921 Tex protein YqgF-like domain GII87_02705 PF17674 HHH domain GII87_02705 PF09371 Tex-like protein N-terminal domain GII87_02705 PF00575 S1 RNA binding domain GII87_02715 PF10263 SprT-like family GII87_02715 PF17283 SprT-like zinc ribbon domain GII87_02755 PF14659 Phage integrase, N-terminal SAM-like domain GII87_02755 PF00589 Phage integrase family GII87_02760 PF06114 IrrE N-terminal-like domain GII87_02765 PF01381 Helix-turn-helix GII87_02790 PF06125 Bacterial protein of unknown function (DUF961) GII87_02800 PF18106 Rolling Circle replication initiation protein N-terminal domain GII87_02800 PF02486 Replication initiation factor GII87_02820 PF12642 Conjugative transposon protein TcpC GII87_02830 PF12648 TcpE family GII87_02840 PF08960 Domain of unknown function (DUF1874) GII87_02850 PF00877 NlpC/P60 family GII87_02860 PF14729 Domain of unknown function with cystatin-like fold (DUF4467) GII87_02865 PF13676 TIR domain GII87_02870 PF18801 response regulator aspartate phosphatase H, N terminal GII87_02885 PF00296 Luciferase-like monooxygenase GII87_02890 PF01037 Lrp/AsnC ligand binding domain GII87_02895 PF01037 Lrp/AsnC ligand binding domain GII87_02900 PF00857 Isochorismatase family GII87_02905 PF12706 Beta-lactamase superfamily domain GII87_02910 PF00083 Sugar (and other) transporter GII87_02910 PF07690 Major Facilitator Superfamily GII87_02930 PF01965 DJ-1/PfpI family GII87_02935 PF00313 'Cold-shock' DNA-binding domain GII87_02940 PF02559 CarD-like/TRCF domain GII87_02950 PF12833 Helix-turn-helix domain GII87_02950 PF02311 AraC-like ligand binding domain GII87_02955 PF00892 EamA-like transporter family GII87_02960 PF12833 Helix-turn-helix domain GII87_02960 PF06445 GyrI-like small molecule binding domain GII87_02965 PF00392 Bacterial regulatory proteins, gntR family GII87_02965 PF00155 Aminotransferase class I and II GII87_02970 PF07690 Major Facilitator Superfamily GII87_02980 PF08818 Domain of unknown function (DU1801) GII87_02990 PF00892 EamA-like transporter family GII87_02995 PF00155 Aminotransferase class I and II GII87_02995 PF00392 Bacterial regulatory proteins, gntR family GII87_03000 PF01575 MaoC like domain GII87_03005 PF06821 Serine hydrolase GII87_03010 PF01638 HxlR-like helix-turn-helix GII87_03015 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) GII87_03015 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 GII87_03020 PF01638 HxlR-like helix-turn-helix GII87_03025 PF02525 Flavodoxin-like fold GII87_03030 PF07690 Major Facilitator Superfamily GII87_03035 PF00440 Bacterial regulatory proteins, tetR family GII87_03035 PF16859 Tetracyclin repressor-like, C-terminal domain GII87_03045 PF01022 Bacterial regulatory protein, arsR family GII87_03050 PF02040 Arsenical pump membrane protein GII87_03060 PF12746 GNAT acetyltransferase GII87_03065 PF00892 EamA-like transporter family GII87_03070 PF00155 Aminotransferase class I and II GII87_03070 PF00392 Bacterial regulatory proteins, gntR family GII87_03075 PF01613 Flavin reductase like domain GII87_03085 PF02627 Carboxymuconolactone decarboxylase family GII87_03100 PF07730 Histidine kinase GII87_03100 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GII87_03105 PF00196 Bacterial regulatory proteins, luxR family GII87_03105 PF00072 Response regulator receiver domain GII87_03110 PF03176 MMPL family GII87_03115 PF12697 Alpha/beta hydrolase family GII87_03120 PF04474 Protein of unknown function (DUF554) GII87_03125 PF06445 GyrI-like small molecule binding domain GII87_03125 PF13411 MerR HTH family regulatory protein GII87_03130 PF16916 Dimerisation domain of Zinc Transporter GII87_03130 PF01545 Cation efflux family GII87_03135 PF00881 Nitroreductase family GII87_03140 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily GII87_03145 PF07681 DoxX GII87_03150 PF00085 Thioredoxin GII87_03155 PF10676 Spore germination protein gerPA/gerPF GII87_03160 PF10676 Spore germination protein gerPA/gerPF GII87_03165 PF04239 Protein of unknown function (DUF421) GII87_03170 PF04239 Protein of unknown function (DUF421) GII87_03175 PF00011 Hsp20/alpha crystallin family GII87_03180 PF10676 Spore germination protein gerPA/gerPF GII87_03185 PF10676 Spore germination protein gerPA/gerPF GII87_03190 PF00440 Bacterial regulatory proteins, tetR family GII87_03195 PF13564 DoxX-like family GII87_03200 PF00583 Acetyltransferase (GNAT) family GII87_03210 PF00324 Amino acid permease GII87_03215 PF05163 DinB family GII87_03220 PF01047 MarR family GII87_03225 PF03176 MMPL family GII87_03230 PF00881 Nitroreductase family GII87_03235 PF01047 MarR family GII87_03240 PF07690 Major Facilitator Superfamily GII87_03245 PF01925 Sulfite exporter TauE/SafE GII87_03250 PF00392 Bacterial regulatory proteins, gntR family GII87_03250 PF07729 FCD domain GII87_03255 PF01476 LysM domain GII87_03255 PF00704 Glycosyl hydrolases family 18 GII87_03260 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase GII87_03265 PF08139 Prokaryotic membrane lipoprotein lipid attachment site GII87_03265 PF11611 Domain of unknown function (DUF4352) GII87_03270 PF00245 Alkaline phosphatase GII87_03275 PF08818 Domain of unknown function (DU1801) GII87_03280 PF16302 Domain of unknown function (DUF4944) GII87_03285 PF00583 Acetyltransferase (GNAT) family GII87_03290 PF01966 HD domain GII87_03295 PF07563 Protein of unknown function (DUF1541) GII87_03300 PF07690 Major Facilitator Superfamily GII87_03305 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit GII87_03310 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit GII87_03315 PF02378 Phosphotransferase system, EIIC GII87_03320 PF00232 Glycosyl hydrolase family 1 GII87_03325 PF00392 Bacterial regulatory proteins, gntR family GII87_03325 PF07702 UTRA domain GII87_03330 PF00480 ROK family GII87_03335 PF01238 Phosphomannose isomerase type I GII87_03340 PF02156 Glycosyl hydrolase family 26 GII87_03385 PF02769 AIR synthase related protein, C-terminal domain GII87_03385 PF00586 AIR synthase related protein, N-terminal domain GII87_03390 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE GII87_03395 PF00814 Glycoprotease family GII87_03400 PF00583 Acetyltransferase (GNAT) family GII87_03405 PF00814 Glycoprotease family GII87_03410 PF00005 ABC transporter GII87_03410 PF16326 ABC transporter C-terminal domain GII87_03410 PF12848 ABC transporter GII87_03415 PF01967 MoaC family GII87_03420 PF06971 Putative DNA-binding protein N-terminus GII87_03420 PF02629 CoA binding domain GII87_03425 PF02416 mttA/Hcf106 family GII87_03430 PF00902 Sec-independent protein translocase protein (TatC) GII87_03435 PF14146 Domain of unknown function (DUF4305) GII87_03440 PF02517 CPBP intramembrane metalloprotease GII87_03445 PF00166 Chaperonin 10 Kd subunit GII87_03450 PF00118 TCP-1/cpn60 chaperonin family GII87_03475 PF00145 C-5 cytosine-specific DNA methylase GII87_03480 PF00145 C-5 cytosine-specific DNA methylase GII87_03500 PF07728 AAA domain (dynein-related subfamily) GII87_03505 PF09563 LlaJI restriction endonuclease GII87_03525 PF13176 Tetratricopeptide repeat GII87_03525 PF00931 NB-ARC domain GII87_03530 PF00107 Zinc-binding dehydrogenase GII87_03530 PF08240 Alcohol dehydrogenase GroES-like domain GII87_03540 PF00294 pfkB family carbohydrate kinase GII87_03545 PF04012 PspA/IM30 family GII87_03550 PF08271 TFIIB zinc-binding GII87_03555 PF04536 TPM domain GII87_03560 PF13421 SPFH domain-Band 7 family GII87_03565 PF07885 Ion channel GII87_03570 PF00083 Sugar (and other) transporter GII87_03575 PF00107 Zinc-binding dehydrogenase GII87_03575 PF08240 Alcohol dehydrogenase GroES-like domain GII87_03580 PF03330 Lytic transglycolase GII87_03585 PF07676 WD40-like Beta Propeller Repeat GII87_03595 PF14169 Cold-inducible protein YdjO GII87_03600 PF12697 Alpha/beta hydrolase family GII87_03605 PF13170 Protein of unknown function (DUF4003) GII87_03610 PF00394 Multicopper oxidase GII87_03610 PF07732 Multicopper oxidase GII87_03610 PF07731 Multicopper oxidase GII87_03615 PF00324 Amino acid permease GII87_03625 PF01545 Cation efflux family GII87_03625 PF16916 Dimerisation domain of Zinc Transporter GII87_03630 PF07726 ATPase family associated with various cellular activities (AAA) GII87_03630 PF17863 AAA lid domain GII87_03635 PF01882 Protein of unknown function DUF58 GII87_03640 PF01841 Transglutaminase-like superfamily GII87_03640 PF13559 Domain of unknown function (DUF4129) GII87_03640 PF11992 Domain of unknown function (DUF3488) GII87_03645 PF00117 Glutamine amidotransferase class-I GII87_03645 PF00958 GMP synthase C terminal domain GII87_03645 PF02540 NAD synthase GII87_03650 PF00860 Permease family GII87_03660 PF13076 Fur-regulated basic protein A GII87_03665 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) GII87_03670 PF14044 NETI protein GII87_03675 PF00731 AIR carboxylase GII87_03680 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain GII87_03680 PF02222 ATP-grasp domain GII87_03685 PF10397 Adenylosuccinate lyase C-terminus GII87_03685 PF00206 Lyase GII87_03690 PF01259 SAICAR synthetase GII87_03695 PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase GII87_03705 PF02769 AIR synthase related protein, C-terminal domain GII87_03705 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain GII87_03705 PF00586 AIR synthase related protein, N-terminal domain GII87_03710 PF00156 Phosphoribosyl transferase domain GII87_03715 PF02769 AIR synthase related protein, C-terminal domain GII87_03715 PF00586 AIR synthase related protein, N-terminal domain GII87_03720 PF00551 Formyl transferase GII87_03725 PF01808 AICARFT/IMPCHase bienzyme GII87_03725 PF02142 MGS-like domain GII87_03730 PF02844 Phosphoribosylglycinamide synthetase, N domain GII87_03730 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain GII87_03730 PF02843 Phosphoribosylglycinamide synthetase, C domain GII87_03735 PF01037 Lrp/AsnC ligand binding domain GII87_03740 PF13520 Amino acid permease GII87_03745 PF11127 Protein of unknown function (DUF2892) GII87_03750 PF13382 Adenine deaminase C-terminal domain GII87_03750 PF01979 Amidohydrolase family GII87_03755 PF17479 Protein of unknown function (DUF3048) C-terminal domain GII87_03755 PF11258 Protein of unknown function (DUF3048) N-terminal domain GII87_03760 PF01371 Trp repressor protein GII87_03765 PF01645 Conserved region in glutamate synthase GII87_03770 PF01884 PcrB family GII87_03775 PF00580 UvrD/REP helicase N-terminal domain GII87_03775 PF13361 UvrD-like helicase C-terminal domain GII87_03780 PF00533 BRCA1 C Terminus (BRCT) domain GII87_03780 PF01653 NAD-dependent DNA ligase adenylation domain GII87_03780 PF03120 NAD-dependent DNA ligase OB-fold domain GII87_03780 PF03119 NAD-dependent DNA ligase C4 zinc finger domain GII87_03780 PF12826 Helix-hairpin-helix motif GII87_03785 PF07537 CamS sex pheromone cAM373 precursor GII87_03790 PF01636 Phosphotransferase enzyme family GII87_03795 PF02308 MgtC family GII87_03800 PF00474 Sodium:solute symporter family GII87_03805 PF02686 Glu-tRNAGln amidotransferase C subunit GII87_03810 PF01425 Amidase GII87_03815 PF02934 GatB/GatE catalytic domain GII87_03815 PF02637 GatB domain GII87_03820 PF00440 Bacterial regulatory proteins, tetR family GII87_03825 PF00873 AcrB/AcrD/AcrF family GII87_03830 PF00781 Diacylglycerol kinase catalytic domain GII87_03835 PF05958 tRNA (Uracil-5-)-methyltransferase GII87_03835 PF01938 TRAM domain GII87_03840 PF13408 Recombinase zinc beta ribbon domain GII87_03840 PF07508 Recombinase GII87_03845 PF00239 Resolvase, N terminal domain GII87_03845 PF18010 Cry35Ab1 HTH C-terminal domain GII87_03860 PF10544 T5orf172 domain GII87_03875 PF04634 Protein of unknown function, DUF600 GII87_03880 PF04740 LXG domain of WXG superfamily GII87_03890 PF18801 response regulator aspartate phosphatase H, N terminal GII87_03890 PF13176 Tetratricopeptide repeat GII87_03900 PF01709 Transcriptional regulator GII87_03910 PF00440 Bacterial regulatory proteins, tetR family GII87_03915 PF12680 SnoaL-like domain GII87_03920 PF01370 NAD dependent epimerase/dehydratase family GII87_03925 PF11007 Spore coat associated protein JA (CotJA) GII87_03930 PF12652 CotJB protein GII87_03935 PF05067 Manganese containing catalase GII87_03940 PF00583 Acetyltransferase (GNAT) family GII87_03945 PF14150 YesK-like protein GII87_03950 PF04854 Protein of unknown function, DUF624 GII87_03955 PF06580 Histidine kinase GII87_03955 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GII87_03955 PF00672 HAMP domain GII87_03955 PF02743 Cache domain GII87_03960 PF00072 Response regulator receiver domain GII87_03960 PF12833 Helix-turn-helix domain GII87_03965 PF13416 Bacterial extracellular solute-binding protein GII87_03970 PF00528 Binding-protein-dependent transport system inner membrane component GII87_03975 PF00528 Binding-protein-dependent transport system inner membrane component GII87_03980 PF07470 Glycosyl Hydrolase Family 88 GII87_03985 PF12833 Helix-turn-helix domain GII87_03990 PF13472 GDSL-like Lipase/Acylhydrolase family GII87_03995 PF09224 Domain of unknown function (DUF1961) GII87_04000 PF04854 Protein of unknown function, DUF624 GII87_04005 PF18370 Rhamnogalacturonan I lyases beta-sheet domain GII87_04010 PF18370 Rhamnogalacturonan I lyases beta-sheet domain GII87_04010 PF01839 FG-GAP repeat GII87_04015 PF00657 GDSL-like Lipase/Acylhydrolase GII87_04020 PF02449 Beta-galactosidase GII87_04020 PF08533 Beta-galactosidase C-terminal domain GII87_04020 PF08532 Beta-galactosidase trimerisation domain GII87_04030 PF01547 Bacterial extracellular solute-binding protein GII87_04035 PF00528 Binding-protein-dependent transport system inner membrane component GII87_04040 PF00528 Binding-protein-dependent transport system inner membrane component GII87_04045 PF11975 Family 4 glycosyl hydrolase C-terminal domain GII87_04045 PF02056 Family 4 glycosyl hydrolase GII87_04050 PF04239 Protein of unknown function (DUF421) GII87_04055 PF03992 Antibiotic biosynthesis monooxygenase GII87_04060 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily GII87_04075 PF10055 Uncharacterized small protein (DUF2292) GII87_04080 PF01027 Inhibitor of apoptosis-promoting Bax1 GII87_04085 PF00892 EamA-like transporter family GII87_04090 PF01047 MarR family GII87_04095 PF01494 FAD binding domain GII87_04100 PF13037 Domain of unknown function (DUF3898) GII87_04100 PF13039 Protein of unknown function (DUF3900) GII87_04105 PF00258 Flavodoxin GII87_04105 PF00175 Oxidoreductase NAD-binding domain GII87_04105 PF00667 FAD binding domain GII87_04105 PF00067 Cytochrome P450 GII87_04110 PF00884 Sulfatase GII87_04115 PF00483 Nucleotidyl transferase GII87_04120 PF16363 GDP-mannose 4,6 dehydratase GII87_04125 PF03407 Nucleotide-diphospho-sugar transferase GII87_04130 PF00535 Glycosyl transferase family 2 GII87_04135 PF03407 Nucleotide-diphospho-sugar transferase GII87_04140 PF07690 Major Facilitator Superfamily GII87_04145 PF13419 Haloacid dehalogenase-like hydrolase GII87_04150 PF13520 Amino acid permease GII87_04155 PF00171 Aldehyde dehydrogenase family GII87_04160 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GII87_04165 PF12848 ABC transporter GII87_04165 PF16326 ABC transporter C-terminal domain GII87_04165 PF00005 ABC transporter GII87_04170 PF10787 Uncharacterised protein from bacillus cereus group GII87_04175 PF13411 MerR HTH family regulatory protein GII87_04180 PF07690 Major Facilitator Superfamily GII87_04190 PF12848 ABC transporter GII87_04190 PF00005 ABC transporter GII87_04195 PF00271 Helicase conserved C-terminal domain GII87_04195 PF00270 DEAD/DEAH box helicase GII87_04200 PF00583 Acetyltransferase (GNAT) family GII87_04205 PF00107 Zinc-binding dehydrogenase GII87_04205 PF16884 N-terminal domain of oxidoreductase GII87_04210 PF07690 Major Facilitator Superfamily GII87_04215 PF03781 Sulfatase-modifying factor enzyme 1 GII87_04220 PF00005 ABC transporter GII87_04225 PF01032 FecCD transport family GII87_04230 PF01032 FecCD transport family GII87_04235 PF01497 Periplasmic binding protein GII87_04240 PF11486 Protein of unknown function (DUF3212) GII87_04245 PF11181 Heat induced stress protein YflT GII87_04250 PF00544 Pectate lyase GII87_04255 PF00939 Sodium:sulfate symporter transmembrane region GII87_04260 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GII87_04260 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain GII87_04265 PF08279 HTH domain GII87_04265 PF00072 Response regulator receiver domain GII87_04265 PF12431 Transcriptional regulator GII87_04270 PF03401 Tripartite tricarboxylate transporter family receptor GII87_04275 PF03600 Citrate transporter GII87_04280 PF00753 Metallo-beta-lactamase superfamily GII87_04285 PF02898 Nitric oxide synthase, oxygenase domain GII87_04290 PF00708 Acylphosphatase GII87_04295 PF03473 MOSC domain GII87_04295 PF03475 3-alpha domain GII87_04300 PF11121 Protein of unknown function (DUF2639) GII87_04310 PF11588 Protein of unknown function (DUF3243) GII87_04315 PF00557 Metallopeptidase family M24 GII87_04320 PF02378 Phosphotransferase system, EIIC GII87_04320 PF00367 phosphotransferase system, EIIB GII87_04325 PF00884 Sulfatase GII87_04335 PF09350 Domain of unknown function (DUF1992) GII87_04340 PF01235 Sodium:alanine symporter family GII87_04345 PF03845 Spore germination protein GII87_04355 PF05504 Spore germination B3/ GerAC like, C-terminal GII87_04360 PF03323 Bacillus/Clostridium GerA spore germination protein GII87_04365 PF02378 Phosphotransferase system, EIIC GII87_04365 PF00367 phosphotransferase system, EIIB GII87_04370 PF16657 Maltogenic Amylase, C-terminal domain GII87_04370 PF00128 Alpha amylase, catalytic domain GII87_04375 PF07702 UTRA domain GII87_04375 PF00392 Bacterial regulatory proteins, gntR family GII87_04380 PF00881 Nitroreductase family GII87_04385 PF02872 5'-nucleotidase, C-terminal domain GII87_04385 PF00149 Calcineurin-like phosphoesterase GII87_04390 PF01965 DJ-1/PfpI family GII87_04395 PF07690 Major Facilitator Superfamily GII87_04400 PF06569 Protein of unknown function (DUF1128) GII87_04405 PF01451 Low molecular weight phosphotyrosine protein phosphatase GII87_04415 PF03631 Virulence factor BrkB GII87_04420 PF07690 Major Facilitator Superfamily GII87_04430 PF01699 Sodium/calcium exchanger protein GII87_04435 PF14167 YfkD-like protein GII87_04440 PF00924 Mechanosensitive ion channel GII87_04445 PF04055 Radical SAM superfamily GII87_04445 PF08756 YfkB-like domain GII87_04455 PF01522 Polysaccharide deacetylase GII87_04460 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase GII87_04460 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase GII87_04465 PF01544 CorA-like Mg2+ transporter protein GII87_04470 PF00730 HhH-GPD superfamily base excision DNA repair protein GII87_04475 PF05958 tRNA (Uracil-5-)-methyltransferase GII87_04475 PF01938 TRAM domain GII87_04480 PF14118 YfzA-like protein GII87_04485 PF01207 Dihydrouridine synthase (Dus) GII87_04500 PF00676 Dehydrogenase E1 component GII87_04505 PF02779 Transketolase, pyrimidine binding domain GII87_04505 PF02780 Transketolase, C-terminal domain GII87_04510 PF00364 Biotin-requiring enzyme GII87_04510 PF02817 e3 binding domain GII87_04510 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) GII87_04515 PF07992 Pyridine nucleotide-disulphide oxidoreductase GII87_04515 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GII87_04520 PF01590 GAF domain GII87_04520 PF00158 Sigma-54 interaction domain GII87_04520 PF02954 Bacterial regulatory protein, Fis family GII87_04525 PF08141 Small acid-soluble spore protein H family GII87_04530 PF02694 Uncharacterised BCR, YnfA/UPF0060 family GII87_04535 PF17353 Family of unknown function (DUF5381) GII87_04540 PF17353 Family of unknown function (DUF5381) GII87_04555 PF06013 Proteins of 100 residues with WXG GII87_04560 PF11975 Family 4 glycosyl hydrolase C-terminal domain GII87_04560 PF02056 Family 4 glycosyl hydrolase GII87_04565 PF01380 SIS domain GII87_04565 PF01418 Helix-turn-helix domain, rpiR family GII87_04570 PF00367 phosphotransferase system, EIIB GII87_04570 PF02378 Phosphotransferase system, EIIC GII87_04575 PF00664 ABC transporter transmembrane region GII87_04575 PF00005 ABC transporter GII87_04580 PF00664 ABC transporter transmembrane region GII87_04580 PF00005 ABC transporter GII87_04585 PF07681 DoxX GII87_04590 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily GII87_04595 PF02311 AraC-like ligand binding domain GII87_04595 PF12833 Helix-turn-helix domain GII87_04600 PF00083 Sugar (and other) transporter GII87_04605 PF01261 Xylose isomerase-like TIM barrel GII87_04610 PF01408 Oxidoreductase family, NAD-binding Rossmann fold GII87_04610 PF02894 Oxidoreductase family, C-terminal alpha/beta domain GII87_04615 PF07730 Histidine kinase GII87_04620 PF00196 Bacterial regulatory proteins, luxR family GII87_04620 PF00072 Response regulator receiver domain GII87_04625 PF00005 ABC transporter GII87_04640 PF10400 Virulence activator alpha C-term GII87_04640 PF03551 Transcriptional regulator PadR-like family GII87_04645 PF01674 Lipase (class 2) GII87_04650 PF01757 Acyltransferase family GII87_04655 PF00440 Bacterial regulatory proteins, tetR family GII87_04655 PF17922 Tetracyclin repressor-like, C-terminal domain GII87_04660 PF07690 Major Facilitator Superfamily GII87_04665 PF12867 DinB superfamily GII87_04670 PF07690 Major Facilitator Superfamily GII87_04675 PF01047 MarR family GII87_04680 PF03706 Lysylphosphatidylglycerol synthase TM region GII87_04680 PF09924 Uncharacterised conserved protein (DUF2156) GII87_04685 PF01497 Periplasmic binding protein GII87_04690 PF01032 FecCD transport family GII87_04695 PF01032 FecCD transport family GII87_04700 PF02567 Phenazine biosynthesis-like protein GII87_04705 PF00881 Nitroreductase family GII87_04710 PF14151 YfhD-like protein GII87_04715 PF14152 YfhE-like protein GII87_04720 PF01370 NAD dependent epimerase/dehydratase family GII87_04720 PF08338 Domain of unknown function (DUF1731) GII87_04725 PF02631 RecX family GII87_04730 PF08838 Protein of unknown function (DUF1811) GII87_04735 PF07690 Major Facilitator Superfamily GII87_04740 PF08176 Small acid-soluble spore protein K family GII87_04745 PF14043 WVELL protein GII87_04750 PF08239 Bacterial SH3 domain GII87_04755 PF13630 SdpI/YhfL protein family GII87_04760 PF00561 alpha/beta hydrolase fold GII87_04765 PF00535 Glycosyl transferase family 2 GII87_04770 PF09586 Bacterial membrane protein YfhO GII87_04775 PF04307 LexA-binding, inner membrane-associated putative hydrolase GII87_04780 PF00730 HhH-GPD superfamily base excision DNA repair protein GII87_04780 PF14815 NUDIX domain GII87_04795 PF04259 Small, acid-soluble spore protein, gamma-type GII87_04800 PF14182 YgaB-like protein GII87_04805 PF04167 Protein of unknown function (DUF402) GII87_04810 PF00005 ABC transporter GII87_04810 PF00664 ABC transporter transmembrane region GII87_04815 PF06081 Aromatic acid exporter family member 1 GII87_04820 PF00202 Aminotransferase class-III GII87_04825 PF00578 AhpC/TSA family GII87_04830 PF01475 Ferric uptake regulator family GII87_04835 PF11023 Zinc-ribbon containing domain GII87_04840 PF14540 Nucleotidyltransferase-like GII87_04840 PF18576 Helix-turn-helix domain GII87_04940 PF07070 SpoOM protein GII87_04950 PF07875 Coat F domain GII87_04955 PF03575 Peptidase family S51 GII87_04960 PF01964 Radical SAM ThiC family GII87_04960 PF13667 ThiC-associated domain GII87_04965 PF08031 Berberine and berberine like GII87_04965 PF01565 FAD binding domain GII87_04970 PF13040 Fur-regulated basic protein B GII87_04975 PF06628 Catalase-related immune-responsive GII87_04975 PF00199 Catalase GII87_04980 PF00005 ABC transporter GII87_04985 PF09084 NMT1/THI5 like GII87_04990 PF00528 Binding-protein-dependent transport system inner membrane component GII87_04995 PF00296 Luciferase-like monooxygenase GII87_05005 PF00253 Ribosomal protein S14p/S29e GII87_05015 PF01381 Helix-turn-helix GII87_05030 PF08331 Domain of unknown function (DUF1730) GII87_05035 PF12671 Putative amidase domain GII87_05040 PF00588 SpoU rRNA Methylase family GII87_05045 PF13171 Protein of unknown function (DUF4004) GII87_05050 PF04519 Polymer-forming cytoskeletal GII87_05060 PF06798 PrkA serine protein kinase C-terminal domain GII87_05060 PF08298 PrkA AAA domain GII87_05065 PF04285 Protein of unknown function (DUF444) GII87_05070 PF01047 MarR family GII87_05080 PF07690 Major Facilitator Superfamily GII87_05085 PF03358 NADPH-dependent FMN reductase GII87_05105 PF00392 Bacterial regulatory proteins, gntR family GII87_05110 PF00005 ABC transporter GII87_05115 PF00005 ABC transporter GII87_05120 PF12679 ABC-2 family transporter protein GII87_05125 PF00313 'Cold-shock' DNA-binding domain GII87_05130 PF03180 NLPA lipoprotein GII87_05135 PF00990 Diguanylate cyclase, GGDEF domain GII87_05135 PF07694 5TMR of 5TMR-LYT GII87_05140 PF00375 Sodium:dicarboxylate symporter family GII87_05150 PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) GII87_05160 PF07875 Coat F domain GII87_05165 PF00746 LPXTG cell wall anchor motif GII87_05165 PF02872 5'-nucleotidase, C-terminal domain GII87_05165 PF00565 Staphylococcal nuclease homologue GII87_05165 PF00149 Calcineurin-like phosphoesterase GII87_05170 PF04203 Sortase domain GII87_05175 PF01479 S4 domain GII87_05175 PF00849 RNA pseudouridylate synthase GII87_05180 PF17326 Family of unknown function (DUF5365) GII87_05185 PF00571 CBS domain GII87_05190 PF13419 Haloacid dehalogenase-like hydrolase GII87_05195 PF00795 Carbon-nitrogen hydrolase GII87_05195 PF00583 Acetyltransferase (GNAT) family GII87_05200 PF00202 Aminotransferase class-III GII87_05205 PF04309 Glycerol-3-phosphate responsive antiterminator GII87_05210 PF00230 Major intrinsic protein GII87_05215 PF00370 FGGY family of carbohydrate kinases, N-terminal domain GII87_05215 PF02782 FGGY family of carbohydrate kinases, C-terminal domain GII87_05220 PF01266 FAD dependent oxidoreductase GII87_05220 PF16901 C-terminal domain of alpha-glycerophosphate oxidase GII87_05225 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I GII87_05225 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II GII87_05225 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III GII87_05225 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain GII87_05230 PF07730 Histidine kinase GII87_05230 PF13185 GAF domain GII87_05235 PF00072 Response regulator receiver domain GII87_05235 PF00196 Bacterial regulatory proteins, luxR family GII87_05240 PF03358 NADPH-dependent FMN reductase GII87_05245 PF14148 YhdB-like protein GII87_05250 PF13028 Protein of unknown function (DUF3889) GII87_05255 PF00877 NlpC/P60 family GII87_05255 PF01476 LysM domain GII87_05260 PF02082 Transcriptional regulator GII87_05265 PF05552 Conserved TM helix GII87_05270 PF04293 SpoVR like protein GII87_05275 PF00245 Alkaline phosphatase GII87_05280 PF01476 LysM domain GII87_05280 PF00877 NlpC/P60 family GII87_05285 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GII87_05285 PF03466 LysR substrate binding domain GII87_05290 PF00285 Citrate synthase, C-terminal domain GII87_05300 PF13520 Amino acid permease GII87_05305 PF00209 Sodium:neurotransmitter symporter family GII87_05310 PF00392 Bacterial regulatory proteins, gntR family GII87_05310 PF00155 Aminotransferase class I and II GII87_05315 PF00583 Acetyltransferase (GNAT) family GII87_05320 PF17453 Sigma-M inhibitor GII87_05325 PF13791 Sigma factor regulator C-terminal GII87_05325 PF13800 Sigma factor regulator N-terminal GII87_05330 PF08281 Sigma-70, region 4 GII87_05330 PF04542 Sigma-70 region 2 GII87_05335 PF00248 Aldo/keto reductase family GII87_05340 PF01553 Acyltransferase GII87_05345 PF03471 Transporter associated domain GII87_05345 PF00571 CBS domain GII87_05345 PF01595 Cyclin M transmembrane N-terminal domain GII87_05350 PF13411 MerR HTH family regulatory protein GII87_05355 PF00155 Aminotransferase class I and II GII87_05360 PF03471 Transporter associated domain GII87_05360 PF01595 Cyclin M transmembrane N-terminal domain GII87_05360 PF00571 CBS domain GII87_05365 PF02537 CrcB-like protein, Camphor Resistance (CrcB) GII87_05370 PF02537 CrcB-like protein, Camphor Resistance (CrcB) GII87_05375 PF03009 Glycerophosphoryl diester phosphodiesterase family GII87_05380 PF17444 Uncharacterized YhdX-like GII87_05385 PF00924 Mechanosensitive ion channel GII87_05390 PF02146 Sir2 family GII87_05395 PF01522 Polysaccharide deacetylase GII87_05400 PF01063 Amino-transferase class IV GII87_05405 PF03553 Na+/H+ antiporter family GII87_05410 PF00582 Universal stress protein family GII87_05420 PF00664 ABC transporter transmembrane region GII87_05420 PF00005 ABC transporter GII87_05425 PF00005 ABC transporter GII87_05425 PF00664 ABC transporter transmembrane region GII87_05430 PF13460 NAD(P)H-binding GII87_05440 PF00269 Small, acid-soluble spore proteins, alpha/beta type GII87_05445 PF17277 Family of unknown function (DUF5342) GII87_05450 PF14398 YheC/D like ATP-grasp GII87_05455 PF14398 YheC/D like ATP-grasp GII87_05460 PF04286 Protein of unknown function (DUF445) GII87_05465 PF06133 Control of competence regulator ComK, YlbF/YmcA GII87_05470 PF08713 DNA alkylation repair enzyme GII87_05480 PF04055 Radical SAM superfamily GII87_05485 PF00999 Sodium/hydrogen exchanger family GII87_05490 PF02080 TrkA-C domain GII87_05500 PF00378 Enoyl-CoA hydratase/isomerase GII87_05505 PF14120 YhzD-like protein GII87_05510 PF13732 Domain of unknown function (DUF4162) GII87_05510 PF00005 ABC transporter GII87_05520 PF00149 Calcineurin-like phosphoesterase GII87_05525 PF13514 AAA domain GII87_05530 PF01966 HD domain GII87_05535 PF14147 Sporulation protein YhaL GII87_05545 PF09680 Family of unknown function GII87_05550 PF09680 Family of unknown function GII87_05560 PF11667 Putative zincin peptidase GII87_05565 PF08963 Protein of unknown function (DUF1878) GII87_05570 PF01047 MarR family GII87_05575 PF12732 YtxH-like protein GII87_05585 PF17099 Tryptophan transporter TrpP GII87_05590 PF00266 Aminotransferase class-V GII87_05595 PF01230 HIT domain GII87_05600 PF00005 ABC transporter GII87_05605 PF05975 Bacterial ABC transporter protein EcsB GII87_05610 PF12787 EcsC protein family GII87_05615 PF01546 Peptidase family M20/M25/M40 GII87_05615 PF07687 Peptidase dimerisation domain GII87_05630 PF03992 Antibiotic biosynthesis monooxygenase GII87_05635 PF00905 Penicillin binding protein transpeptidase domain GII87_05635 PF00912 Transglycosylase GII87_05640 PF01208 Uroporphyrinogen decarboxylase (URO-D) GII87_05655 PF00440 Bacterial regulatory proteins, tetR family GII87_05655 PF17932 Tetracyclin repressor-like, C-terminal domain GII87_05665 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal GII87_05665 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III GII87_05670 PF10086 YhfC intramembrane metalloprotease GII87_05680 PF05343 M42 glutamyl aminopeptidase GII87_05685 PF04266 ASCH domain GII87_05690 PF00375 Sodium:dicarboxylate symporter family GII87_05695 PF14149 YhfH-like protein GII87_05700 PF12706 Beta-lactamase superfamily domain GII87_05705 PF03099 Biotin/lipoate A/B protein ligase family GII87_05705 PF10437 Bacterial lipoate protein ligase C-terminus GII87_05710 PF13460 NAD(P)H-binding GII87_05715 PF00501 AMP-binding enzyme GII87_05715 PF13193 AMP-binding enzyme C-terminal domain GII87_05725 PF01435 Peptidase family M48 GII87_05725 PF16491 CAAX prenyl protease N-terminal, five membrane helices GII87_05730 PF05922 Peptidase inhibitor I9 GII87_05730 PF00082 Subtilase family GII87_05735 PF00583 Acetyltransferase (GNAT) family GII87_05740 PF00107 Zinc-binding dehydrogenase GII87_05740 PF08240 Alcohol dehydrogenase GroES-like domain GII87_05745 PF01497 Periplasmic binding protein GII87_05750 PF00300 Histidine phosphatase superfamily (branch 1) GII87_05755 PF02803 Thiolase, C-terminal domain GII87_05755 PF00108 Thiolase, N-terminal domain GII87_05760 PF00501 AMP-binding enzyme GII87_05760 PF13193 AMP-binding enzyme C-terminal domain GII87_05765 PF02632 BioY family GII87_05770 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GII87_05775 PF00355 Rieske [2Fe-2S] domain GII87_05775 PF01266 FAD dependent oxidoreductase GII87_05785 PF08858 IDEAL domain GII87_05790 PF06338 ComK protein GII87_05800 PF05901 Excalibur calcium-binding domain GII87_05805 PF00474 Sodium:solute symporter family GII87_05810 PF11755 Protein of unknown function (DUF3311) GII87_05820 PF09335 SNARE associated Golgi protein GII87_05825 PF10502 Signal peptidase, peptidase S26 GII87_05830 PF01494 FAD binding domain GII87_05835 PF01047 MarR family GII87_05840 PF07690 Major Facilitator Superfamily GII87_05845 PF01408 Oxidoreductase family, NAD-binding Rossmann fold GII87_05845 PF02894 Oxidoreductase family, C-terminal alpha/beta domain GII87_05850 PF05116 Sucrose-6F-phosphate phosphohydrolase GII87_05855 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family GII87_05860 PF00356 Bacterial regulatory proteins, lacI family GII87_05865 PF05145 Transition state regulatory protein AbrB GII87_05870 PF07690 Major Facilitator Superfamily GII87_05875 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle GII87_05875 PF12793 Sugar transport-related sRNA regulator N-term GII87_05880 PF03860 Domain of Unknown Function (DUF326) GII87_05885 PF02915 Rubrerythrin GII87_05890 PF12705 PD-(D/E)XK nuclease superfamily GII87_05890 PF13361 UvrD-like helicase C-terminal domain GII87_05895 PF00580 UvrD/REP helicase N-terminal domain GII87_05895 PF12705 PD-(D/E)XK nuclease superfamily GII87_05895 PF13361 UvrD-like helicase C-terminal domain GII87_05900 PF12320 Type 5 capsule protein repressor C-terminal domain GII87_05900 PF00149 Calcineurin-like phosphoesterase GII87_05905 PF13476 AAA domain GII87_05915 PF10676 Spore germination protein gerPA/gerPF GII87_05920 PF10970 Spore germination protein GerPE GII87_05930 PF10737 Spore germination protein GerPC GII87_05935 PF10803 Spore germination GerPB GII87_05940 PF10676 Spore germination protein gerPA/gerPF GII87_05945 PF09388 Spo0E like sporulation regulatory protein GII87_05950 PF08757 CotH kinase protein GII87_05955 PF01557 Fumarylacetoacetate (FAA) hydrolase family GII87_05960 PF07457 Protein of unknown function (DUF1516) GII87_05965 PF00082 Subtilase family GII87_05965 PF17936 Bacterial Ig domain GII87_05970 PF10949 Protein of unknown function (DUF2777) GII87_05975 PF00733 Asparagine synthase GII87_05975 PF13537 Glutamine amidotransferase domain GII87_05980 PF05163 DinB family GII87_05990 PF01554 MatE GII87_05995 PF12833 Helix-turn-helix domain GII87_05995 PF02311 AraC-like ligand binding domain GII87_06000 PF00356 Bacterial regulatory proteins, lacI family GII87_06005 PF01408 Oxidoreductase family, NAD-binding Rossmann fold GII87_06005 PF02894 Oxidoreductase family, C-terminal alpha/beta domain GII87_06010 PF05163 DinB family GII87_06015 PF01810 LysE type translocator GII87_06020 PF00392 Bacterial regulatory proteins, gntR family GII87_06020 PF00155 Aminotransferase class I and II GII87_06025 PF13599 Pentapeptide repeats (9 copies) GII87_06030 PF08386 TAP-like protein GII87_06030 PF00561 alpha/beta hydrolase fold GII87_06040 PF01747 ATP-sulfurylase GII87_06040 PF14306 PUA-like domain GII87_06045 PF01507 Phosphoadenosine phosphosulfate reductase family GII87_06050 PF04029 2-phosphosulpholactate phosphatase GII87_06055 PF02679 (2R)-phospho-3-sulfolactate synthase (ComA) GII87_06060 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 GII87_06065 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain GII87_06065 PF13378 Enolase C-terminal domain-like GII87_06070 PF07690 Major Facilitator Superfamily GII87_06075 PF13673 Acetyltransferase (GNAT) domain GII87_06075 PF18014 Acetyltransferase (GNAT) domain GII87_06080 PF13673 Acetyltransferase (GNAT) domain GII87_06085 PF02219 Methylenetetrahydrofolate reductase GII87_06085 PF02574 Homocysteine S-methyltransferase GII87_06090 PF04461 Protein of unknown function (DUF520) GII87_06095 PF13509 S1 domain GII87_06095 PF17783 CvfB-like winged helix domain GII87_06110 PF17418 Sporulation delaying protein SdpA GII87_06115 PF03551 Transcriptional regulator PadR-like family GII87_06125 PF12650 Domain of unknown function (DUF3784) GII87_06130 PF02868 Thermolysin metallopeptidase, alpha-helical domain GII87_06130 PF01447 Thermolysin metallopeptidase, catalytic domain GII87_06130 PF03413 Peptidase propeptide and YPEB domain GII87_06130 PF07504 Fungalysin/Thermolysin Propeptide Motif GII87_06135 PF02645 Uncharacterised protein, DegV family COG1307 GII87_06140 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) GII87_06140 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 GII87_06145 PF12690 Intracellular proteinase inhibitor GII87_06150 PF12758 Protein of unknown function (DUF3813) GII87_06160 PF00326 Prolyl oligopeptidase family GII87_06165 PF01883 Iron-sulfur cluster assembly protein GII87_06175 PF01565 FAD binding domain GII87_06180 PF07690 Major Facilitator Superfamily GII87_06185 PF01118 Semialdehyde dehydrogenase, NAD binding domain GII87_06185 PF02774 Semialdehyde dehydrogenase, dimerisation domain GII87_06190 PF01960 ArgJ family GII87_06195 PF00696 Amino acid kinase family GII87_06200 PF00202 Aminotransferase class-III GII87_06205 PF00117 Glutamine amidotransferase class-I GII87_06205 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain GII87_06210 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain GII87_06210 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain GII87_06215 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain GII87_06215 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain GII87_06220 PF14168 YjzC-like protein GII87_06225 PF11151 Protein of unknown function (DUF2929) GII87_06240 PF02608 ABC transporter substrate-binding protein PnrA-like GII87_06245 PF10815 ComZ GII87_06255 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal GII87_06255 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III GII87_06260 PF02801 Beta-ketoacyl synthase, C-terminal domain GII87_06260 PF00109 Beta-ketoacyl synthase, N-terminal domain GII87_06265 PF10026 Predicted Zn-dependent protease (DUF2268) GII87_06270 PF08352 Oligopeptide/dipeptide transporter, C-terminal region GII87_06270 PF00005 ABC transporter GII87_06275 PF08352 Oligopeptide/dipeptide transporter, C-terminal region GII87_06275 PF00005 ABC transporter GII87_06280 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle GII87_06285 PF00528 Binding-protein-dependent transport system inner membrane component GII87_06290 PF12911 N-terminal TM domain of oligopeptide transport permease C GII87_06290 PF00528 Binding-protein-dependent transport system inner membrane component GII87_06295 PF12227 Protein of unknown function (DUF3603) GII87_06300 PF00579 tRNA synthetases class I (W and Y) GII87_06305 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle GII87_06310 PF00528 Binding-protein-dependent transport system inner membrane component GII87_06315 PF00528 Binding-protein-dependent transport system inner membrane component GII87_06315 PF12911 N-terminal TM domain of oligopeptide transport permease C GII87_06320 PF08352 Oligopeptide/dipeptide transporter, C-terminal region GII87_06320 PF00005 ABC transporter GII87_06325 PF08352 Oligopeptide/dipeptide transporter, C-terminal region GII87_06325 PF00005 ABC transporter GII87_06330 PF07690 Major Facilitator Superfamily GII87_06335 PF13508 Acetyltransferase (GNAT) domain GII87_06340 PF03960 ArsC family GII87_06345 PF03741 Integral membrane protein TerC family GII87_06355 PF05389 Negative regulator of genetic competence (MecA) GII87_06365 PF06054 Competence protein CoiA-like family GII87_06370 PF01432 Peptidase family M3 GII87_06370 PF08439 Oligopeptidase F GII87_06385 PF01152 Bacterial-like globin GII87_06390 PF01464 Transglycosylase SLT domain GII87_06395 PF01928 CYTH domain GII87_06405 PF04607 Region found in RelA / SpoT proteins GII87_06410 PF01513 ATP-NAD kinase GII87_06415 PF00849 RNA pseudouridylate synthase GII87_06420 PF00149 Calcineurin-like phosphoesterase GII87_06425 PF02080 TrkA-C domain GII87_06425 PF00999 Sodium/hydrogen exchanger family GII87_06425 PF02254 TrkA-N domain GII87_06430 PF03070 TENA/THI-4/PQQC family GII87_06435 PF02581 Thiamine monophosphate synthase GII87_06440 PF01266 FAD dependent oxidoreductase GII87_06445 PF02597 ThiS family GII87_06450 PF05690 Thiazole biosynthesis protein ThiG GII87_06455 PF00899 ThiF family GII87_06460 PF08543 Phosphomethylpyrimidine kinase GII87_06470 PF14153 Spore coat protein CotO GII87_06475 PF10612 Spore coat protein Z GII87_06480 PF10612 Spore coat protein Z GII87_06485 PF07552 Spore Coat Protein X and V domain GII87_06495 PF07552 Spore Coat Protein X and V domain GII87_06500 PF07098 Protein of unknown function (DUF1360) GII87_06515 PF14069 Stage VI sporulation protein F GII87_06520 PF00580 UvrD/REP helicase N-terminal domain GII87_06520 PF13361 UvrD-like helicase C-terminal domain GII87_06530 PF13673 Acetyltransferase (GNAT) domain GII87_06540 PF00756 Putative esterase GII87_06545 PF01053 Cys/Met metabolism PLP-dependent enzyme GII87_06550 PF01053 Cys/Met metabolism PLP-dependent enzyme GII87_06555 PF13302 Acetyltransferase (GNAT) domain GII87_06560 PF05684 Protein of unknown function (DUF819) GII87_06570 PF12671 Putative amidase domain GII87_06600 PF09639 YjcQ protein GII87_06605 PF10668 Phage terminase small subunit GII87_06610 PF03992 Antibiotic biosynthesis monooxygenase GII87_06620 PF02368 Bacterial Ig-like domain (group 2) GII87_06625 PF05043 Mga helix-turn-helix domain GII87_06625 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 GII87_06625 PF08279 HTH domain GII87_06625 PF00874 PRD domain GII87_06630 PF02378 Phosphotransferase system, EIIC GII87_06630 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit GII87_06630 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 GII87_06635 PF01238 Phosphomannose isomerase type I GII87_06640 PF11208 Protein of unknown function (DUF2992) GII87_06645 PF13302 Acetyltransferase (GNAT) domain GII87_06655 PF04073 Aminoacyl-tRNA editing domain GII87_06660 PF13783 Domain of unknown function (DUF4177) GII87_06665 PF14154 Domain of unknown function (DUF4306) GII87_06670 PF01040 UbiA prenyltransferase family GII87_06680 PF11738 Protein of unknown function (DUF3298) GII87_06680 PF01522 Polysaccharide deacetylase GII87_06680 PF13739 Deacetylase PdaC GII87_06685 PF10901 Protein of unknown function (DUF2690) GII87_06690 PF14070 Putative motility protein GII87_06695 PF10026 Predicted Zn-dependent protease (DUF2268) GII87_06700 PF10990 Protein of unknown function (DUF2809) GII87_06705 PF14172 Domain of unknown function (DUF4309) GII87_06710 PF12838 4Fe-4S dicluster domain GII87_06710 PF00384 Molybdopterin oxidoreductase GII87_06710 PF01568 Molydopterin dinucleotide binding domain GII87_06710 PF04879 Molybdopterin oxidoreductase Fe4S4 domain GII87_06710 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region GII87_06715 PF07849 Protein of unknown function (DUF1641) GII87_06720 PF11611 Domain of unknown function (DUF4352) GII87_06725 PF00293 NUDIX domain GII87_06735 PF00067 Cytochrome P450 GII87_06740 PF04101 Glycosyltransferase family 28 C-terminal domain GII87_06750 PF02602 Uroporphyrinogen-III synthase HemD GII87_06755 PF03649 Uncharacterised protein family (UPF0014) GII87_06760 PF00005 ABC transporter GII87_06765 PF13536 Putative multidrug resistance efflux transporter GII87_06775 PF07849 Protein of unknown function (DUF1641) GII87_06780 PF07992 Pyridine nucleotide-disulphide oxidoreductase GII87_06785 PF02614 Glucuronate isomerase GII87_06795 PF02615 Malate/L-lactate dehydrogenase GII87_06800 PF08240 Alcohol dehydrogenase GroES-like domain GII87_06800 PF00107 Zinc-binding dehydrogenase GII87_06805 PF03786 D-mannonate dehydratase (UxuA) GII87_06810 PF00106 short chain dehydrogenase GII87_06815 PF07690 Major Facilitator Superfamily GII87_06820 PF00356 Bacterial regulatory proteins, lacI family GII87_06825 PF01232 Mannitol dehydrogenase Rossmann domain GII87_06825 PF08125 Mannitol dehydrogenase C-terminal domain GII87_06830 PF08666 SAF domain GII87_06830 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus GII87_06835 PF01925 Sulfite exporter TauE/SafE GII87_06840 PF05163 DinB family GII87_06845 PF00004 ATPase family associated with various cellular activities (AAA) GII87_06850 PF18801 response regulator aspartate phosphatase H, N terminal GII87_06860 PF03795 YCII-related domain GII87_06865 PF01476 LysM domain GII87_06865 PF01510 N-acetylmuramoyl-L-alanine amidase GII87_06865 PF01471 Putative peptidoglycan binding domain GII87_06870 PF08000 Bacterial PH domain GII87_06875 PF05908 Poly-gamma-glutamate hydrolase GII87_06880 PF05067 Manganese containing catalase GII87_06885 PF06114 IrrE N-terminal-like domain GII87_06890 PF01381 Helix-turn-helix GII87_06905 PF01695 IstB-like ATP binding protein GII87_06925 PF08281 Sigma-70, region 4 GII87_06930 PF10668 Phage terminase small subunit GII87_06930 PF03592 Terminase small subunit GII87_06935 PF17288 Terminase RNAseH like domain GII87_06935 PF04466 Phage terminase large subunit GII87_06940 PF04860 Phage portal protein GII87_06945 PF14550 Putative phage serine protease XkdF GII87_06950 PF05065 Phage capsid family GII87_06955 PF11436 Protein of unknown function (DUF3199) GII87_06960 PF12206 Domain of unknown function (DUF3599) GII87_06965 PF04883 Bacteriophage HK97-gp10, putative tail-component GII87_06980 PF17481 Phage tail sheath protein beta-sandwich domain GII87_06980 PF17482 Phage tail sheath C-terminal domain GII87_06980 PF04984 Phage tail sheath protein subtilisin-like domain GII87_06985 PF09393 Phage tail tube protein GII87_06990 PF08890 Phage XkdN-like tail assembly chaperone protein, TAC GII87_07000 PF01464 Transglycosylase SLT domain GII87_07005 PF01476 LysM domain GII87_07015 PF10844 Protein of unknown function (DUF2577) GII87_07020 PF10934 Protein of unknown function (DUF2634) GII87_07025 PF04865 Baseplate J-like protein GII87_07030 PF10076 Uncharacterised protein conserved in bacteria (DUF2313) GII87_07045 PF09636 XkdW protein GII87_07050 PF09693 Phage uncharacterised protein (Phage_XkdX) GII87_07060 PF10779 Haemolysin XhlA GII87_07065 PF04688 SPP1 phage holin GII87_07070 PF01471 Putative peptidoglycan binding domain GII87_07070 PF01510 N-acetylmuramoyl-L-alanine amidase GII87_07070 PF01476 LysM domain GII87_07080 PF14185 Antitoxin SpoIISB, type II toxin-antitoxin system GII87_07085 PF14171 Toxin SpoIISA, type II toxin-antitoxin system GII87_07090 PF01384 Phosphate transporter family GII87_07095 PF01865 Protein of unknown function DUF47 GII87_07100 PF13520 Amino acid permease GII87_07105 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily GII87_07115 PF13231 Dolichyl-phosphate-mannose-protein mannosyltransferase GII87_07120 PF00535 Glycosyl transferase family 2 GII87_07125 PF13180 PDZ domain GII87_07130 PF14748 Pyrroline-5-carboxylate reductase dimerisation GII87_07130 PF03807 NADP oxidoreductase coenzyme F420-dependent GII87_07135 PF04951 D-aminopeptidase GII87_07140 PF00528 Binding-protein-dependent transport system inner membrane component GII87_07145 PF12911 N-terminal TM domain of oligopeptide transport permease C GII87_07145 PF00528 Binding-protein-dependent transport system inner membrane component GII87_07150 PF00005 ABC transporter GII87_07150 PF08352 Oligopeptide/dipeptide transporter, C-terminal region GII87_07155 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle GII87_07160 PF02016 LD-carboxypeptidase N-terminal domain GII87_07160 PF17676 LD-carboxypeptidase C-terminal domain GII87_07165 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain GII87_07165 PF13378 Enolase C-terminal domain-like GII87_07170 PF00877 NlpC/P60 family GII87_07175 PF00005 ABC transporter GII87_07175 PF08352 Oligopeptide/dipeptide transporter, C-terminal region GII87_07180 PF10282 Lactonase, 7-bladed beta-propeller GII87_07190 PF03061 Thioesterase superfamily GII87_07195 PF00970 Oxidoreductase FAD-binding domain GII87_07195 PF00042 Globin GII87_07195 PF00175 Oxidoreductase NAD-binding domain GII87_07205 PF04239 Protein of unknown function (DUF421) GII87_07210 PF12867 DinB superfamily GII87_07215 PF13302 Acetyltransferase (GNAT) domain GII87_07220 PF00893 Small Multidrug Resistance protein GII87_07225 PF00893 Small Multidrug Resistance protein GII87_07230 PF00551 Formyl transferase GII87_07230 PF01842 ACT domain GII87_07235 PF01472 PUA domain GII87_07235 PF00696 Amino acid kinase family GII87_07240 PF00171 Aldehyde dehydrogenase family GII87_07245 PF02566 OsmC-like protein GII87_07250 PF01047 MarR family GII87_07255 PF02566 OsmC-like protein GII87_07265 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region GII87_07270 PF08267 Cobalamin-independent synthase, N-terminal domain GII87_07270 PF01717 Cobalamin-independent synthase, Catalytic domain GII87_07275 PF00082 Subtilase family GII87_07280 PF01740 STAS domain GII87_07285 PF02361 Cobalt transport protein GII87_07290 PF00005 ABC transporter GII87_07295 PF09819 ABC-type cobalt transport system, permease component GII87_07300 PF07615 YKOF-related Family GII87_07305 PF00486 Transcriptional regulatory protein, C terminal GII87_07305 PF00072 Response regulator receiver domain GII87_07310 PF00512 His Kinase A (phospho-acceptor) domain GII87_07310 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GII87_07310 PF00672 HAMP domain GII87_07315 PF03413 Peptidase propeptide and YPEB domain GII87_07320 PF03413 Peptidase propeptide and YPEB domain GII87_07325 PF11132 Transcriptional regulator protein (SplA) GII87_07330 PF01769 Divalent cation transporter GII87_07330 PF00571 CBS domain GII87_07330 PF03448 MgtE intracellular N domain GII87_07335 PF13411 MerR HTH family regulatory protein GII87_07350 PF01047 MarR family GII87_07355 PF06925 Monogalactosyldiacylglycerol (MGDG) synthase GII87_07365 PF00149 Calcineurin-like phosphoesterase GII87_07375 PF00535 Glycosyl transferase family 2 GII87_07380 PF01068 ATP dependent DNA ligase domain GII87_07385 PF02735 Ku70/Ku80 beta-barrel domain GII87_07390 PF00563 EAL domain GII87_07390 PF00990 Diguanylate cyclase, GGDEF domain GII87_07390 PF03707 Bacterial signalling protein N terminal repeat GII87_07395 PF09335 SNARE associated Golgi protein GII87_07400 PF03741 Integral membrane protein TerC family GII87_07405 PF04542 Sigma-70 region 2 GII87_07410 PF12791 Anti-sigma factor N-terminus GII87_07415 PF00269 Small, acid-soluble spore proteins, alpha/beta type GII87_07420 PF08876 Domain of unknown function (DUF1836) GII87_07425 PF01435 Peptidase family M48 GII87_07430 PF02386 Cation transport protein GII87_07445 PF01757 Acyltransferase family GII87_07450 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GII87_07450 PF13426 PAS domain GII87_07450 PF13188 PAS domain GII87_07450 PF00989 PAS fold GII87_07450 PF00512 His Kinase A (phospho-acceptor) domain GII87_07455 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain GII87_07455 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain GII87_07465 PF01008 Initiation factor 2 subunit family GII87_07470 PF01636 Phosphotransferase enzyme family GII87_07475 PF00795 Carbon-nitrogen hydrolase GII87_07480 PF00155 Aminotransferase class I and II GII87_07485 PF00016 Ribulose bisphosphate carboxylase large chain, catalytic domain GII87_07485 PF02788 Ribulose bisphosphate carboxylase large chain, N-terminal domain GII87_07495 PF00596 Class II Aldolase and Adducin N-terminal domain GII87_07500 PF03079 ARD/ARD' family GII87_07505 PF06803 Protein of unknown function (DUF1232) GII87_07510 PF09388 Spo0E like sporulation regulatory protein GII87_07520 PF00512 His Kinase A (phospho-acceptor) domain GII87_07520 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GII87_07520 PF02743 Cache domain GII87_07525 PF01047 MarR family GII87_07530 PF00691 OmpA family GII87_07530 PF13677 Membrane MotB of proton-channel complex MotA/MotB GII87_07535 PF01618 MotA/TolQ/ExbB proton channel family GII87_07540 PF10431 C-terminal, D2-small domain, of ClpB protein GII87_07540 PF00004 ATPase family associated with various cellular activities (AAA) GII87_07540 PF07724 AAA domain (Cdc48 subfamily) GII87_07540 PF17871 AAA lid domain GII87_07550 PF06508 Queuosine biosynthesis protein QueC GII87_07555 PF01242 6-pyruvoyl tetrahydropterin synthase GII87_07560 PF04055 Radical SAM superfamily GII87_07565 PF14489 QueF-like protein GII87_07570 PF01638 HxlR-like helix-turn-helix GII87_07580 PF01476 LysM domain GII87_07585 PF01476 LysM domain GII87_07595 PF11514 Protein of unknown function (DUF3219) GII87_07600 PF09953 Uncharacterized protein conserved in bacteria (DUF2187) GII87_07610 PF07486 Cell Wall Hydrolase GII87_07615 PF01943 Polysaccharide biosynthesis protein GII87_07620 PF00578 AhpC/TSA family GII87_07635 PF00557 Metallopeptidase family M24 GII87_07635 PF01321 Creatinase/Prolidase N-terminal domain GII87_07640 PF00356 Bacterial regulatory proteins, lacI family GII87_07640 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family GII87_07645 PF00874 PRD domain GII87_07645 PF03123 CAT RNA binding domain GII87_07650 PF00367 phosphotransferase system, EIIB GII87_07650 PF02378 Phosphotransferase system, EIIC GII87_07650 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 GII87_07655 PF00381 PTS HPr component phosphorylation site GII87_07660 PF00391 PEP-utilising enzyme, mobile domain GII87_07660 PF05524 PEP-utilising enzyme, N-terminal GII87_07660 PF02896 PEP-utilising enzyme, TIM barrel domain GII87_07665 PF11132 Transcriptional regulator protein (SplA) GII87_07675 PF00583 Acetyltransferase (GNAT) family GII87_07680 PF00672 HAMP domain GII87_07680 PF02743 Cache domain GII87_07680 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GII87_07685 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase GII87_07685 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase GII87_07690 PF00188 Cysteine-rich secretory protein family GII87_07695 PF00905 Penicillin binding protein transpeptidase domain GII87_07695 PF03717 Penicillin-binding Protein dimerisation domain GII87_07700 PF00989 PAS fold GII87_07700 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GII87_07700 PF00512 His Kinase A (phospho-acceptor) domain GII87_07700 PF08447 PAS fold GII87_07705 PF00155 Aminotransferase class I and II GII87_07715 PF00072 Response regulator receiver domain GII87_07715 PF01584 CheW-like domain GII87_07720 PF14177 YkyB-like protein GII87_07725 PF07690 Major Facilitator Superfamily GII87_07730 PF03734 L,D-transpeptidase catalytic domain GII87_07730 PF01476 LysM domain GII87_07735 PF00149 Calcineurin-like phosphoesterase GII87_07735 PF10518 TAT (twin-arginine translocation) pathway signal sequence GII87_07745 PF01471 Putative peptidoglycan binding domain GII87_07745 PF08924 Domain of unknown function (DUF1906) GII87_07760 PF10388 EAL-domain associated signalling protein domain GII87_07760 PF00563 EAL domain GII87_07770 PF08796 Protein of unknown function (DUF1797) GII87_07775 PF04308 Ribonuclease H-like GII87_07780 PF14156 Antirepressor AbbA GII87_07790 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GII87_07790 PF03466 LysR substrate binding domain GII87_07795 PF00258 Flavodoxin GII87_07805 PF00258 Flavodoxin GII87_07810 PF14602 Hexapeptide repeat of succinyl-transferase GII87_07810 PF00132 Bacterial transferase hexapeptide (six repeats) GII87_07810 PF08503 Tetrahydrodipicolinate succinyltransferase N-terminal GII87_07815 PF01546 Peptidase family M20/M25/M40 GII87_07815 PF07687 Peptidase dimerisation domain GII87_07820 PF03698 Uncharacterised protein family (UPF0180) GII87_07825 PF00924 Mechanosensitive ion channel GII87_07830 PF10417 C-terminal domain of 1-Cys peroxiredoxin GII87_07830 PF00578 AhpC/TSA family GII87_07835 PF00578 AhpC/TSA family GII87_07850 PF12804 MobA-like NTP transferase domain GII87_07855 PF00899 ThiF family GII87_07860 PF03453 MoeA N-terminal region (domain I and II) GII87_07860 PF03454 MoeA C-terminal region (domain IV) GII87_07860 PF00994 Probable molybdopterin binding domain GII87_07865 PF03205 Molybdopterin guanine dinucleotide synthesis protein B GII87_07870 PF02391 MoaE protein GII87_07875 PF02597 ThiS family GII87_07880 PF00005 ABC transporter GII87_07880 PF00664 ABC transporter transmembrane region GII87_07885 PF00664 ABC transporter transmembrane region GII87_07885 PF00005 ABC transporter GII87_07890 PF04893 Yip1 domain GII87_07895 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion GII87_07900 PF00005 ABC transporter GII87_07905 PF02687 FtsX-like permease family GII87_07905 PF12704 MacB-like periplasmic core domain GII87_07910 PF00455 DeoR C terminal sensor domain GII87_07910 PF08220 DeoR-like helix-turn-helix domain GII87_07915 PF00294 pfkB family carbohydrate kinase GII87_07920 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit GII87_07920 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 GII87_07925 PF10502 Signal peptidase, peptidase S26 GII87_07935 PF12848 ABC transporter GII87_07935 PF00005 ABC transporter GII87_07940 PF08546 Ketopantoate reductase PanE/ApbA C terminal GII87_07940 PF02558 Ketopantoate reductase PanE/ApbA GII87_07945 PF02073 Thermophilic metalloprotease (M29) GII87_07950 PF17447 Uncharacterized YkpC-like GII87_07960 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin GII87_07960 PF18277 AbrB C-terminal domain GII87_07965 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GII87_07965 PF00989 PAS fold GII87_07965 PF00512 His Kinase A (phospho-acceptor) domain GII87_07970 PF06094 Gamma-glutamyl cyclotransferase, AIG2-like GII87_07975 PF02254 TrkA-N domain GII87_07975 PF02080 TrkA-C domain GII87_07980 PF13382 Adenine deaminase C-terminal domain GII87_07980 PF01979 Amidohydrolase family GII87_07985 PF17770 Ribonuclease J C-terminal domain GII87_07985 PF00753 Metallo-beta-lactamase superfamily GII87_07985 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain GII87_08000 PF01327 Polypeptide deformylase GII87_08010 PF10368 Putative cell-wall binding lipoprotein GII87_08015 PF00676 Dehydrogenase E1 component GII87_08020 PF02779 Transketolase, pyrimidine binding domain GII87_08020 PF02780 Transketolase, C-terminal domain GII87_08025 PF02817 e3 binding domain GII87_08025 PF00364 Biotin-requiring enzyme GII87_08025 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) GII87_08030 PF07992 Pyridine nucleotide-disulphide oxidoreductase GII87_08030 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GII87_08040 PF13790 SR1 protein GII87_08045 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain GII87_08045 PF01276 Orn/Lys/Arg decarboxylase, major domain GII87_08050 PF05256 Uncharacterised protein family (UPF0223) GII87_08055 PF06335 Protein of unknown function (DUF1054) GII87_08065 PF00459 Inositol monophosphatase family GII87_08070 PF00583 Acetyltransferase (GNAT) family GII87_08075 PF04072 Leucine carboxyl methyltransferase GII87_08080 PF02868 Thermolysin metallopeptidase, alpha-helical domain GII87_08080 PF01447 Thermolysin metallopeptidase, catalytic domain GII87_08080 PF03413 Peptidase propeptide and YPEB domain GII87_08080 PF07504 Fungalysin/Thermolysin Propeptide Motif GII87_08095 PF04542 Sigma-70 region 2 GII87_08095 PF08281 Sigma-70, region 4 GII87_08100 PF13490 Putative zinc-finger GII87_08110 PF17259 Family of unknown function (DUF5325) GII87_08120 PF14036 YlaH-like protein GII87_08125 PF09963 Uncharacterized protein conserved in bacteria (DUF2197) GII87_08130 PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) GII87_08135 PF13638 PIN domain GII87_08135 PF02562 PhoH-like protein GII87_08145 PF04960 Glutaminase GII87_08150 PF07408 Protein of unknown function (DUF1507) GII87_08155 PF01098 Cell cycle protein GII87_08160 PF00682 HMGL-like GII87_08160 PF02785 Biotin carboxylase C-terminal domain GII87_08160 PF00289 Biotin carboxylase, N-terminal domain GII87_08160 PF00364 Biotin-requiring enzyme GII87_08160 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain GII87_08160 PF02436 Conserved carboxylase domain GII87_08165 PF02628 Cytochrome oxidase assembly protein GII87_08170 PF01040 UbiA prenyltransferase family GII87_08175 PF00116 Cytochrome C oxidase subunit II, periplasmic domain GII87_08175 PF00034 Cytochrome c GII87_08175 PF02790 Cytochrome C oxidase subunit II, transmembrane domain GII87_08180 PF00115 Cytochrome C and Quinol oxidase polypeptide I GII87_08185 PF00510 Cytochrome c oxidase subunit III GII87_08190 PF03626 Prokaryotic Cytochrome C oxidase subunit IV GII87_08195 PF09678 Cytochrome c oxidase caa3 assembly factor (Caa3_CtaG) GII87_08200 PF08868 YugN-like family GII87_08205 PF00571 CBS domain GII87_08210 PF14504 CAP-associated N-terminal GII87_08210 PF00188 Cysteine-rich secretory protein family GII87_08215 PF14071 Putative coat protein GII87_08220 PF14003 YlbE-like protein GII87_08225 PF06133 Control of competence regulator ComK, YlbF/YmcA GII87_08230 PF09902 Uncharacterized protein conserved in bacteria (DUF2129) GII87_08240 PF01467 Cytidylyltransferase-like GII87_08245 PF07670 Nucleoside recognition GII87_08250 PF01734 Patatin-like phospholipase GII87_08255 PF05362 Lon protease (S16) C-terminal proteolytic domain GII87_08255 PF13180 PDZ domain GII87_08260 PF05636 HIGH Nucleotidyl Transferase GII87_08270 PF02620 Large ribosomal RNA subunit accumulation protein YceD GII87_08275 PF01783 Ribosomal L32p protein family GII87_08285 PF00583 Acetyltransferase (GNAT) family GII87_08290 PF08546 Ketopantoate reductase PanE/ApbA C terminal GII87_08290 PF02558 Ketopantoate reductase PanE/ApbA GII87_08295 PF10079 Bacillithiol biosynthesis BshC GII87_08300 PF02381 MraZ protein, putative antitoxin-like GII87_08305 PF01795 MraW methylase family GII87_08320 PF03793 PASTA domain GII87_08320 PF03717 Penicillin-binding Protein dimerisation domain GII87_08320 PF00905 Penicillin binding protein transpeptidase domain GII87_08325 PF02875 Mur ligase family, glutamate ligase domain GII87_08325 PF08245 Mur ligase middle domain GII87_08325 PF01225 Mur ligase family, catalytic domain GII87_08330 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 GII87_08330 PF00953 Glycosyl transferase family 4 GII87_08335 PF08245 Mur ligase middle domain GII87_08335 PF02875 Mur ligase family, glutamate ligase domain GII87_08340 PF01098 Cell cycle protein GII87_08345 PF04101 Glycosyltransferase family 28 C-terminal domain GII87_08345 PF03033 Glycosyltransferase family 28 N-terminal domain GII87_08350 PF01565 FAD binding domain GII87_08350 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain GII87_08355 PF08478 POTRA domain, FtsQ-type GII87_08360 PF05949 Bacterial protein of unknown function (DUF881) GII87_08365 PF05949 Bacterial protein of unknown function (DUF881) GII87_08370 PF06947 Protein of unknown function (DUF1290) GII87_08375 PF02491 SHS2 domain inserted in FTSA GII87_08380 PF00091 Tubulin/FtsZ family, GTPase domain GII87_08380 PF12327 FtsZ family, C-terminal domain GII87_08385 PF05922 Peptidase inhibitor I9 GII87_08385 PF00082 Subtilase family GII87_08390 PF03419 Sporulation factor SpoIIGA GII87_08395 PF04545 Sigma-70, region 4 GII87_08395 PF04542 Sigma-70 region 2 GII87_08400 PF04542 Sigma-70 region 2 GII87_08400 PF04539 Sigma-70 region 3 GII87_08400 PF04545 Sigma-70, region 4 GII87_08405 PF00005 ABC transporter GII87_08410 PF01546 Peptidase family M20/M25/M40 GII87_08410 PF07687 Peptidase dimerisation domain GII87_08415 PF05239 PRC-barrel domain GII87_08425 PF01168 Alanine racemase, N-terminal domain GII87_08430 PF04472 Cell division protein SepF GII87_08435 PF02325 YGGT family GII87_08440 PF01479 S4 domain GII87_08440 PF17774 Putative RNA-binding domain in YlmH GII87_08445 PF05103 DivIVA protein GII87_08450 PF00133 tRNA synthetases class I (I, L, M and V) GII87_08450 PF08264 Anticodon-binding domain of tRNA GII87_08455 PF01258 Prokaryotic dksA/traR C4-type zinc finger GII87_08460 PF01252 Signal peptidase (SPase) II GII87_08465 PF01479 S4 domain GII87_08465 PF00849 RNA pseudouridylate synthase GII87_08470 PF00156 Phosphoribosyl transferase domain GII87_08475 PF00860 Permease family GII87_08480 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain GII87_08480 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain GII87_08485 PF01979 Amidohydrolase family GII87_08490 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain GII87_08490 PF00117 Glutamine amidotransferase class-I GII87_08495 PF02142 MGS-like domain GII87_08495 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain GII87_08495 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain GII87_08500 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B GII87_08500 PF00175 Oxidoreductase NAD-binding domain GII87_08505 PF01180 Dihydroorotate dehydrogenase GII87_08510 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family GII87_08515 PF00156 Phosphoribosyl transferase domain GII87_08520 PF01507 Phosphoadenosine phosphosulfate reductase family GII87_08525 PF01384 Phosphate transporter family GII87_08530 PF01747 ATP-sulfurylase GII87_08530 PF14306 PUA-like domain GII87_08540 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases GII87_08545 PF01903 CbiX GII87_08560 PF00690 Cation transporter/ATPase, N-terminus GII87_08560 PF00689 Cation transporting ATPase, C-terminus GII87_08565 PF03755 YicC-like family, N-terminal region GII87_08565 PF08340 Domain of unknown function (DUF1732) GII87_08570 PF04025 Domain of unknown function (DUF370) GII87_08575 PF00625 Guanylate kinase GII87_08580 PF01192 RNA polymerase Rpb6 GII87_08585 PF04127 DNA / pantothenate metabolism flavoprotein GII87_08585 PF02441 Flavoprotein GII87_08590 PF04851 Type III restriction enzyme, res subunit GII87_08590 PF18319 PriA DNA helicase Cys-rich region (CRR) domain GII87_08590 PF00271 Helicase conserved C-terminal domain GII87_08590 PF17764 3′ DNA-binding domain (3′BD) GII87_08590 PF18074 Primosomal protein N C-terminal domain GII87_08595 PF01327 Polypeptide deformylase GII87_08600 PF00551 Formyl transferase GII87_08600 PF02911 Formyl transferase, C-terminal domain GII87_08605 PF01029 NusB family GII87_08605 PF01189 16S rRNA methyltransferase RsmB/F GII87_08610 PF04055 Radical SAM superfamily GII87_08620 PF00069 Protein kinase domain GII87_08620 PF03793 PASTA domain GII87_08625 PF16745 RsgA N-terminal domain GII87_08625 PF03193 RsgA GTPase GII87_08630 PF00834 Ribulose-phosphate 3 epimerase family GII87_08635 PF04263 Thiamin pyrophosphokinase, catalytic domain GII87_08635 PF04265 Thiamin pyrophosphokinase, vitamin B1 binding domain GII87_08640 PF08183 Stage V sporulation protein family GII87_08645 PF00830 Ribosomal L28 family GII87_08650 PF03780 Asp23 family, cell envelope-related function GII87_08655 PF02734 DAK2 domain GII87_08655 PF13684 Dihydroxyacetone kinase family GII87_08660 PF03315 Serine dehydratase beta chain GII87_08660 PF01842 ACT domain GII87_08665 PF03313 Serine dehydratase alpha chain GII87_08670 PF00271 Helicase conserved C-terminal domain GII87_08670 PF00270 DEAD/DEAH box helicase GII87_08670 PF17191 RecG wedge domain GII87_08675 PF03061 Thioesterase superfamily GII87_08680 PF02504 Fatty acid synthesis protein GII87_08685 PF00698 Acyl transferase domain GII87_08695 PF00550 Phosphopantetheine attachment site GII87_08700 PF00035 Double-stranded RNA binding motif GII87_08700 PF14622 Ribonuclease-III-like GII87_08705 PF02463 RecF/RecN/SMC N terminal domain GII87_08705 PF06470 SMC proteins Flexible Hinge Domain GII87_08710 PF02881 SRP54-type protein, helical bundle domain GII87_08710 PF00448 SRP54-type protein, GTPase domain GII87_08715 PF02369 Bacterial Ig-like domain (group 1) GII87_08720 PF04297 Putative helix-turn-helix protein, YlxM / p13 like GII87_08725 PF02978 Signal peptide binding domain GII87_08725 PF00448 SRP54-type protein, GTPase domain GII87_08725 PF02881 SRP54-type protein, helical bundle domain GII87_08730 PF00886 Ribosomal protein S16 GII87_08740 PF11068 YlqD protein GII87_08745 PF01782 RimM N-terminal domain GII87_08745 PF05239 PRC-barrel domain GII87_08750 PF01746 tRNA (Guanine-1)-methyltransferase GII87_08755 PF01245 Ribosomal protein L19 GII87_08760 PF01926 50S ribosome-binding GTPase GII87_08765 PF01351 Ribonuclease HII GII87_08775 PF01312 FlhB HrpN YscU SpaS Family GII87_08780 PF00549 CoA-ligase GII87_08780 PF08442 ATP-grasp domain GII87_08785 PF02629 CoA binding domain GII87_08785 PF00549 CoA-ligase GII87_08790 PF02481 DNA recombination-mediator protein A GII87_08795 PF01751 Toprim domain GII87_08795 PF01396 Topoisomerase DNA binding C4 zinc finger GII87_08795 PF01131 DNA topoisomerase GII87_08800 PF01134 Glucose inhibited division protein A GII87_08805 PF00589 Phage integrase family GII87_08805 PF02899 Phage integrase, N-terminal SAM-like domain GII87_08810 PF00227 Proteasome subunit GII87_08815 PF00004 ATPase family associated with various cellular activities (AAA) GII87_08815 PF07724 AAA domain (Cdc48 subfamily) GII87_08815 PF10431 C-terminal, D2-small domain, of ClpB protein GII87_08820 PF08222 CodY helix-turn-helix domain GII87_08820 PF06018 CodY GAF-like domain GII87_08825 PF00460 Flagella basal body rod protein GII87_08830 PF00460 Flagella basal body rod protein GII87_08830 PF06429 Flagellar basal body rod FlgEFG protein C-terminal GII87_08835 PF02049 Flagellar hook-basal body complex protein FliE GII87_08840 PF01514 Secretory protein of YscJ/FliF family GII87_08840 PF08345 Flagellar M-ring protein C-terminal GII87_08845 PF14841 FliG middle domain GII87_08845 PF01706 FliG C-terminal domain GII87_08845 PF14842 FliG N-terminal domain GII87_08850 PF02108 Flagellar assembly protein FliH GII87_08855 PF18269 T3SS EscN ATPase C-terminal domain GII87_08855 PF02874 ATP synthase alpha/beta family, beta-barrel domain GII87_08855 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain GII87_08860 PF02050 Flagellar FliJ protein GII87_08865 PF03448 MgtE intracellular N domain GII87_08870 PF02120 Flagellar hook-length control protein FliK GII87_08875 PF03963 Flagellar hook capping protein - N-terminal region GII87_08880 PF06429 Flagellar basal body rod FlgEFG protein C-terminal GII87_08880 PF00460 Flagella basal body rod protein GII87_08885 PF06289 Flagellar and Swarming motility proteins GII87_08890 PF03748 Flagellar basal body-associated protein FliL GII87_08895 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term GII87_08895 PF02154 Flagellar motor switch protein FliM GII87_08900 PF04509 CheC-like family GII87_08900 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term GII87_08905 PF00072 Response regulator receiver domain GII87_08910 PF04347 Flagellar biosynthesis protein, FliO GII87_08915 PF00813 FliP family GII87_08920 PF01313 Bacterial export proteins, family 3 GII87_08925 PF01311 Bacterial export proteins, family 1 GII87_08930 PF01312 FlhB HrpN YscU SpaS Family GII87_08935 PF00771 FHIPEP family GII87_08940 PF00448 SRP54-type protein, GTPase domain GII87_08945 PF10609 NUBPL iron-transfer P-loop NTPase GII87_08950 PF01339 CheB methylesterase GII87_08950 PF00072 Response regulator receiver domain GII87_08955 PF07194 P2 response regulator binding domain GII87_08955 PF01627 Hpt domain GII87_08955 PF01584 CheW-like domain GII87_08955 PF02895 Signal transducing histidine kinase, homodimeric domain GII87_08955 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GII87_08960 PF01584 CheW-like domain GII87_08965 PF04509 CheC-like family GII87_08970 PF03975 CheD chemotactic sensory transduction GII87_08975 PF04545 Sigma-70, region 4 GII87_08975 PF04539 Sigma-70 region 3 GII87_08975 PF04542 Sigma-70 region 2 GII87_08985 PF00318 Ribosomal protein S2 GII87_08990 PF00889 Elongation factor TS GII87_08995 PF00696 Amino acid kinase family GII87_09000 PF01765 Ribosome recycling factor GII87_09005 PF01255 Putative undecaprenyl diphosphate synthase GII87_09015 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain GII87_09015 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase GII87_09015 PF13288 DXP reductoisomerase C-terminal domain GII87_09020 PF17820 PDZ domain GII87_09020 PF02163 Peptidase family M50 GII87_09025 PF03129 Anticodon binding domain GII87_09025 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) GII87_09025 PF04073 Aminoacyl-tRNA editing domain GII87_09030 PF02811 PHP domain GII87_09030 PF17657 Bacterial DNA polymerase III alpha subunit finger domain GII87_09030 PF11490 DNA polymerase III polC-type N-terminus II GII87_09030 PF14579 Helix-hairpin-helix motif GII87_09030 PF07733 Bacterial DNA polymerase III alpha NTPase domain GII87_09030 PF14480 DNA polymerase III polC-type N-terminus I GII87_09030 PF00929 Exonuclease GII87_09035 PF02576 RimP N-terminal domain GII87_09035 PF17384 RimP C-terminal SH3 domain GII87_09040 PF08529 NusA N-terminal domain GII87_09040 PF00575 S1 RNA binding domain GII87_09040 PF13184 NusA-like KH domain GII87_09045 PF04296 Protein of unknown function (DUF448) GII87_09050 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family GII87_09055 PF04760 Translation initiation factor IF-2, N-terminal region GII87_09055 PF11987 Translation-initiation factor 2 GII87_09055 PF00009 Elongation factor Tu GTP binding domain GII87_09060 PF04456 Protein of unknown function (DUF503) GII87_09065 PF02033 Ribosome-binding factor A GII87_09070 PF01509 TruB family pseudouridylate synthase (N terminal domain) GII87_09070 PF16198 tRNA pseudouridylate synthase B C-terminal domain GII87_09075 PF01687 Riboflavin kinase GII87_09075 PF06574 FAD synthetase GII87_09080 PF00312 Ribosomal protein S15 GII87_09085 PF01138 3' exoribonuclease family, domain 1 GII87_09085 PF00013 KH domain GII87_09085 PF03725 3' exoribonuclease family, domain 2 GII87_09085 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain GII87_09085 PF00575 S1 RNA binding domain GII87_09090 PF01522 Polysaccharide deacetylase GII87_09095 PF05193 Peptidase M16 inactive domain GII87_09095 PF00675 Insulinase (Peptidase family M16) GII87_09100 PF05239 PRC-barrel domain GII87_09105 PF16924 Dipicolinate synthase subunit A N-terminal domain GII87_09105 PF01262 Alanine dehydrogenase/PNT, C-terminal domain GII87_09110 PF02441 Flavoprotein GII87_09115 PF02774 Semialdehyde dehydrogenase, dimerisation domain GII87_09115 PF01118 Semialdehyde dehydrogenase, NAD binding domain GII87_09120 PF13840 ACT domain GII87_09120 PF00696 Amino acid kinase family GII87_09125 PF00701 Dihydrodipicolinate synthetase family GII87_09130 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain GII87_09130 PF00753 Metallo-beta-lactamase superfamily GII87_09130 PF17770 Ribonuclease J C-terminal domain GII87_09135 PF00574 Clp protease GII87_09140 PF14035 YlzJ-like protein GII87_09145 PF09397 Ftsk gamma domain GII87_09145 PF17854 FtsK alpha domain GII87_09145 PF01580 FtsK/SpoIIIE family GII87_09150 PF07702 UTRA domain GII87_09150 PF00392 Bacterial regulatory proteins, gntR family GII87_09155 PF07690 Major Facilitator Superfamily GII87_09160 PF05193 Peptidase M16 inactive domain GII87_09165 PF00675 Insulinase (Peptidase family M16) GII87_09165 PF05193 Peptidase M16 inactive domain GII87_09175 PF11588 Protein of unknown function (DUF3243) GII87_09180 PF11868 Protein of unknown function (DUF3388) GII87_09185 PF13464 Domain of unknown function (DUF4115) GII87_09190 PF01066 CDP-alcohol phosphatidyltransferase GII87_09195 PF18146 Damage-inducible protein CinA KH domain GII87_09195 PF00994 Probable molybdopterin binding domain GII87_09195 PF02464 Competence-damaged protein GII87_09200 PF00154 recA bacterial DNA recombination protein GII87_09205 PF00144 Beta-lactamase GII87_09210 PF01966 HD domain GII87_09210 PF00013 KH domain GII87_09210 PF12072 Domain of unknown function (DUF3552) GII87_09215 PF13277 YmdB-like protein GII87_09220 PF04232 Stage V sporulation protein S (SpoVS) GII87_09225 PF00107 Zinc-binding dehydrogenase GII87_09225 PF08240 Alcohol dehydrogenase GroES-like domain GII87_09230 PF00155 Aminotransferase class I and II GII87_09235 PF01938 TRAM domain GII87_09235 PF00919 Uncharacterized protein family UPF0004 GII87_09235 PF04055 Radical SAM superfamily GII87_09240 PF06133 Control of competence regulator ComK, YlbF/YmcA GII87_09245 PF10628 Outer spore coat protein E (CotE) GII87_09250 PF01624 MutS domain I GII87_09250 PF05192 MutS domain III GII87_09250 PF05190 MutS family domain IV GII87_09250 PF00488 MutS domain V GII87_09250 PF05188 MutS domain II GII87_09255 PF08676 MutL C terminal dimerisation domain GII87_09255 PF01119 DNA mismatch repair protein, C-terminal domain GII87_09260 PF14184 Regulatory protein YrvL GII87_09270 PF00440 Bacterial regulatory proteins, tetR family GII87_09270 PF13977 BetI-type transcriptional repressor, C-terminal GII87_09275 PF00753 Metallo-beta-lactamase superfamily GII87_09285 PF00698 Acyl transferase domain GII87_09290 PF00698 Acyl transferase domain GII87_09295 PF00698 Acyl transferase domain GII87_09295 PF03060 Nitronate monooxygenase GII87_09300 PF00550 Phosphopantetheine attachment site GII87_09305 PF00109 Beta-ketoacyl synthase, N-terminal domain GII87_09305 PF02801 Beta-ketoacyl synthase, C-terminal domain GII87_09310 PF08540 Hydroxymethylglutaryl-coenzyme A synthase C terminal GII87_09310 PF01154 Hydroxymethylglutaryl-coenzyme A synthase N terminal GII87_09315 PF00378 Enoyl-CoA hydratase/isomerase GII87_09320 PF00378 Enoyl-CoA hydratase/isomerase GII87_09325 PF16197 Ketoacyl-synthetase C-terminal extension GII87_09325 PF00501 AMP-binding enzyme GII87_09325 PF13193 AMP-binding enzyme C-terminal domain GII87_09325 PF14765 Polyketide synthase dehydratase GII87_09325 PF00550 Phosphopantetheine attachment site GII87_09325 PF00668 Condensation domain GII87_09325 PF08659 KR domain GII87_09325 PF02801 Beta-ketoacyl synthase, C-terminal domain GII87_09325 PF00109 Beta-ketoacyl synthase, N-terminal domain GII87_09330 PF02801 Beta-ketoacyl synthase, C-terminal domain GII87_09330 PF00550 Phosphopantetheine attachment site GII87_09330 PF14765 Polyketide synthase dehydratase GII87_09330 PF00109 Beta-ketoacyl synthase, N-terminal domain GII87_09330 PF08659 KR domain GII87_09330 PF16197 Ketoacyl-synthetase C-terminal extension GII87_09335 PF00550 Phosphopantetheine attachment site GII87_09335 PF14765 Polyketide synthase dehydratase GII87_09335 PF08242 Methyltransferase domain GII87_09335 PF02801 Beta-ketoacyl synthase, C-terminal domain GII87_09335 PF00109 Beta-ketoacyl synthase, N-terminal domain GII87_09335 PF16197 Ketoacyl-synthetase C-terminal extension GII87_09335 PF08659 KR domain GII87_09340 PF08659 KR domain GII87_09340 PF13193 AMP-binding enzyme C-terminal domain GII87_09340 PF00668 Condensation domain GII87_09340 PF02801 Beta-ketoacyl synthase, C-terminal domain GII87_09340 PF00109 Beta-ketoacyl synthase, N-terminal domain GII87_09340 PF14765 Polyketide synthase dehydratase GII87_09340 PF00501 AMP-binding enzyme GII87_09340 PF16197 Ketoacyl-synthetase C-terminal extension GII87_09340 PF00550 Phosphopantetheine attachment site GII87_09345 PF16197 Ketoacyl-synthetase C-terminal extension GII87_09345 PF00109 Beta-ketoacyl synthase, N-terminal domain GII87_09345 PF02801 Beta-ketoacyl synthase, C-terminal domain GII87_09345 PF08242 Methyltransferase domain GII87_09345 PF00550 Phosphopantetheine attachment site GII87_09345 PF14765 Polyketide synthase dehydratase GII87_09345 PF00975 Thioesterase domain GII87_09350 PF00067 Cytochrome P450 GII87_09365 PF00082 Subtilase family GII87_09370 PF05908 Poly-gamma-glutamate hydrolase GII87_09375 PF02566 OsmC-like protein GII87_09380 PF00893 Small Multidrug Resistance protein GII87_09385 PF00893 Small Multidrug Resistance protein GII87_09395 PF12788 YmaF family GII87_09405 PF17209 Hfq protein GII87_09410 PF14157 YmzC-like protein GII87_09420 PF07972 NrdI Flavodoxin like GII87_09425 PF00317 Ribonucleotide reductase, all-alpha domain GII87_09425 PF08343 Ribonucleotide reductase N-terminal GII87_09425 PF02867 Ribonucleotide reductase, barrel domain GII87_09430 PF00268 Ribonucleotide reductase, small chain GII87_09440 PF01520 N-acetylmuramoyl-L-alanine amidase GII87_09440 PF05036 Sporulation related domain GII87_09445 PF17866 AAA lid domain GII87_09445 PF00004 ATPase family associated with various cellular activities (AAA) GII87_09450 PF16360 GTP-binding GTPase Middle Region GII87_09450 PF13167 GTP-binding GTPase N-terminal GII87_09450 PF01926 50S ribosome-binding GTPase GII87_09455 PF06838 Methionine gamma-lyase GII87_09460 PF13411 MerR HTH family regulatory protein GII87_09465 PF00120 Glutamine synthetase, catalytic domain GII87_09465 PF03951 Glutamine synthetase, beta-Grasp domain GII87_09495 PF13302 Acetyltransferase (GNAT) domain GII87_09505 PF13021 Domain of unknown function (DUF3885) GII87_09535 PF04616 Glycosyl hydrolases family 43 GII87_09535 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain GII87_09540 PF00480 ROK family GII87_09545 PF01261 Xylose isomerase-like TIM barrel GII87_09550 PF02782 FGGY family of carbohydrate kinases, C-terminal domain GII87_09550 PF00370 FGGY family of carbohydrate kinases, N-terminal domain GII87_09560 PF00565 Staphylococcal nuclease homologue GII87_09565 PF00083 Sugar (and other) transporter GII87_09570 PF00842 Alanine racemase, C-terminal domain GII87_09570 PF01168 Alanine racemase, N-terminal domain GII87_09575 PF10903 Protein of unknown function (DUF2691) GII87_09580 PF00692 dUTPase GII87_09595 PF00303 Thymidylate synthase GII87_09605 PF15493 Domain of unknown function, YrpD GII87_09610 PF14037 YoqO-like protein GII87_09620 PF02416 mttA/Hcf106 family GII87_09635 PF08327 Activator of Hsp90 ATPase homolog 1-like protein GII87_09645 PF03323 Bacillus/Clostridium GerA spore germination protein GII87_09650 PF03845 Spore germination protein GII87_09655 PF05504 Spore germination B3/ GerAC like, C-terminal GII87_09665 PF13761 Domain of unknown function (DUF4166) GII87_09670 PF14158 YndJ-like protein GII87_09680 PF05908 Poly-gamma-glutamate hydrolase GII87_09685 PF10710 Protein of unknown function (DUF2512) GII87_09690 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily GII87_09695 PF00717 Peptidase S24-like GII87_09695 PF01726 LexA DNA binding domain GII87_09700 PF01476 LysM domain GII87_09705 PF00239 Resolvase, N terminal domain GII87_09710 PF05979 Bacterial protein of unknown function (DUF896) GII87_09715 PF02780 Transketolase, C-terminal domain GII87_09715 PF02779 Transketolase, pyrimidine binding domain GII87_09715 PF00456 Transketolase, thiamine diphosphate binding domain GII87_09720 PF10747 Sporulation inhibitor of replication protein SirA GII87_09725 PF03672 Uncharacterised protein family (UPF0154) GII87_09730 PF09388 Spo0E like sporulation regulatory protein GII87_09735 PF02683 Cytochrome C biogenesis protein transmembrane region GII87_09740 PF00072 Response regulator receiver domain GII87_09745 PF07301 Protein of unknown function (DUF1453) GII87_09750 PF11084 Protein of unknown function (DUF2621) GII87_09760 PF08179 Small acid-soluble spore protein P family GII87_09770 PF00694 Aconitase C-terminal domain GII87_09770 PF00330 Aconitase family (aconitate hydratase) GII87_09775 PF00578 AhpC/TSA family GII87_09780 PF13040 Fur-regulated basic protein B GII87_09785 PF08177 Small acid-soluble spore protein N family GII87_09795 PF03061 Thioesterase superfamily GII87_09805 PF01521 Iron-sulphur cluster biosynthesis GII87_09810 PF02660 Glycerol-3-phosphate acyltransferase GII87_09815 PF13380 CoA binding domain GII87_09820 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GII87_09820 PF00986 DNA gyrase B subunit, carboxyl terminus GII87_09820 PF00204 DNA gyrase B GII87_09820 PF01751 Toprim domain GII87_09825 PF00521 DNA gyrase/topoisomerase IV, subunit A GII87_09825 PF03989 DNA gyrase C-terminal domain, beta-propeller GII87_09835 PF01235 Sodium:alanine symporter family GII87_09840 PF00150 Cellulase (glycosyl hydrolase family 5) GII87_09840 PF00942 Cellulose binding domain GII87_09845 PF17452 Uncharacterized YnfE-like GII87_09850 PF17189 Glycosyl hydrolase family 30 beta sandwich domain GII87_09855 PF03422 Carbohydrate binding module (family 6) GII87_09855 PF04616 Glycosyl hydrolases family 43 GII87_09860 PF04138 GtrA-like protein GII87_09865 PF00483 Nucleotidyl transferase GII87_09870 PF09335 SNARE associated Golgi protein GII87_09880 PF01039 Carboxyl transferase domain GII87_09885 PF00378 Enoyl-CoA hydratase/isomerase GII87_09890 PF00682 HMGL-like GII87_09895 PF00364 Biotin-requiring enzyme GII87_09900 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain GII87_09900 PF00289 Biotin carboxylase, N-terminal domain GII87_09900 PF02785 Biotin carboxylase C-terminal domain GII87_09905 PF13193 AMP-binding enzyme C-terminal domain GII87_09905 PF00501 AMP-binding enzyme GII87_09910 PF00441 Acyl-CoA dehydrogenase, C-terminal domain GII87_09910 PF02771 Acyl-CoA dehydrogenase, N-terminal domain GII87_09910 PF02770 Acyl-CoA dehydrogenase, middle domain GII87_09915 PF17329 Family of unknown function (DUF5367) GII87_09925 PF02638 Glycosyl hydrolase-like 10 GII87_09930 PF07098 Protein of unknown function (DUF1360) GII87_09935 PF00975 Thioesterase domain GII87_09935 PF00550 Phosphopantetheine attachment site GII87_09935 PF13193 AMP-binding enzyme C-terminal domain GII87_09935 PF00501 AMP-binding enzyme GII87_09935 PF00668 Condensation domain GII87_09940 PF00501 AMP-binding enzyme GII87_09940 PF13193 AMP-binding enzyme C-terminal domain GII87_09940 PF00668 Condensation domain GII87_09940 PF00550 Phosphopantetheine attachment site GII87_09945 PF13193 AMP-binding enzyme C-terminal domain GII87_09945 PF00668 Condensation domain GII87_09945 PF00501 AMP-binding enzyme GII87_09945 PF00550 Phosphopantetheine attachment site GII87_09950 PF13193 AMP-binding enzyme C-terminal domain GII87_09950 PF00501 AMP-binding enzyme GII87_09950 PF00668 Condensation domain GII87_09950 PF00550 Phosphopantetheine attachment site GII87_09955 PF00550 Phosphopantetheine attachment site GII87_09955 PF00668 Condensation domain GII87_09955 PF00501 AMP-binding enzyme GII87_09955 PF13193 AMP-binding enzyme C-terminal domain GII87_09960 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family GII87_09965 PF01263 Aldose 1-epimerase GII87_09970 PF01554 MatE GII87_09975 PF16800 IseA DL-endopeptidase inhibitor GII87_09985 PF00589 Phage integrase family GII87_09990 PF12728 Helix-turn-helix domain GII87_10000 PF03466 LysR substrate binding domain GII87_10000 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GII87_10005 PF00107 Zinc-binding dehydrogenase GII87_10005 PF08240 Alcohol dehydrogenase GroES-like domain GII87_10010 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster GII87_10010 PF07992 Pyridine nucleotide-disulphide oxidoreductase GII87_10015 PF01493 GXGXG motif GII87_10015 PF01645 Conserved region in glutamate synthase GII87_10015 PF04898 Glutamate synthase central domain GII87_10015 PF00310 Glutamine amidotransferases class-II GII87_10020 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GII87_10020 PF03466 LysR substrate binding domain GII87_10025 PF01472 PUA domain GII87_10025 PF00696 Amino acid kinase family GII87_10030 PF03807 NADP oxidoreductase coenzyme F420-dependent GII87_10030 PF14748 Pyrroline-5-carboxylate reductase dimerisation GII87_10035 PF02334 Replication terminator protein GII87_10040 PF00106 short chain dehydrogenase GII87_10045 PF06103 Bacterial protein of unknown function (DUF948) GII87_10055 PF13302 Acetyltransferase (GNAT) domain GII87_10060 PF07690 Major Facilitator Superfamily GII87_10065 PF00370 FGGY family of carbohydrate kinases, N-terminal domain GII87_10065 PF02782 FGGY family of carbohydrate kinases, C-terminal domain GII87_10070 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GII87_10070 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain GII87_10075 PF04879 Molybdopterin oxidoreductase Fe4S4 domain GII87_10075 PF01568 Molydopterin dinucleotide binding domain GII87_10075 PF00384 Molybdopterin oxidoreductase GII87_10085 PF17094 Uncharacterised protein family (UPF0715) GII87_10100 PF13217 Protein of unknown function (DUF4025) GII87_10105 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GII87_10105 PF00672 HAMP domain GII87_10105 PF05227 CHASE3 domain GII87_10110 PF11794 4-hydroxyphenylacetate 3-hydroxylase N terminal GII87_10110 PF03241 4-hydroxyphenylacetate 3-hydroxylase C terminal GII87_10115 PF03330 Lytic transglycolase GII87_10120 PF06912 Protein of unknown function (DUF1275) GII87_10125 PF00544 Pectate lyase GII87_10130 PF02586 SOS response associated peptidase (SRAP) GII87_10140 PF00190 Cupin GII87_10145 PF16302 Domain of unknown function (DUF4944) GII87_10155 PF00583 Acetyltransferase (GNAT) family GII87_10155 PF14268 YoaP-like GII87_10175 PF04294 VanW like protein GII87_10180 PF11188 Protein of unknown function (DUF2975) GII87_10185 PF13443 Cro/C1-type HTH DNA-binding domain GII87_10190 PF05675 Protein of unknown function (DUF817) GII87_10195 PF03466 LysR substrate binding domain GII87_10195 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GII87_10200 PF00892 EamA-like transporter family GII87_10210 PF01965 DJ-1/PfpI family GII87_10225 PF11518 Protein of unknown function (DUF3221) GII87_10240 PF00391 PEP-utilising enzyme, mobile domain GII87_10240 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain GII87_10245 PF00457 Glycosyl hydrolases family 11 GII87_10250 PF05154 TM2 domain GII87_10255 PF01381 Helix-turn-helix GII87_10270 PF02586 SOS response associated peptidase (SRAP) GII87_10305 PF18801 response regulator aspartate phosphatase H, N terminal GII87_10320 PF08863 YolD-like protein GII87_10330 PF07693 KAP family P-loop domain GII87_10355 PF04740 LXG domain of WXG superfamily GII87_10355 PF14411 A nuclease of the HNH/ENDO VII superfamily with conserved LHH GII87_10360 PF09346 SMI1 / KNR4 family (SUKH-1) GII87_10365 PF01593 Flavin containing amine oxidoreductase GII87_10370 PF11962 Peptidase_G2, IMC autoproteolytic cleavage domain GII87_10370 PF12708 Pectate lyase superfamily protein GII87_10375 PF01588 Putative tRNA binding domain GII87_10380 PF07883 Cupin domain GII87_10380 PF12833 Helix-turn-helix domain GII87_10385 PF00583 Acetyltransferase (GNAT) family GII87_10390 PF00440 Bacterial regulatory proteins, tetR family GII87_10390 PF13305 Tetracyclin repressor-like, C-terminal domain GII87_10395 PF00753 Metallo-beta-lactamase superfamily GII87_10400 PF06445 GyrI-like small molecule binding domain GII87_10405 PF08279 HTH domain GII87_10405 PF13280 WYL domain GII87_10415 PF01022 Bacterial regulatory protein, arsR family GII87_10425 PF04238 Protein of unknown function (DUF420) GII87_10430 PF18846 Bacterial archaeo-eukaryotic release factor family 5 GII87_10440 PF17676 LD-carboxypeptidase C-terminal domain GII87_10440 PF02016 LD-carboxypeptidase N-terminal domain GII87_10445 PF00487 Fatty acid desaturase GII87_10450 PF07730 Histidine kinase GII87_10455 PF00196 Bacterial regulatory proteins, luxR family GII87_10455 PF00072 Response regulator receiver domain GII87_10460 PF06725 3D domain GII87_10460 PF01476 LysM domain GII87_10465 PF00570 HRDC domain GII87_10465 PF00271 Helicase conserved C-terminal domain GII87_10465 PF00270 DEAD/DEAH box helicase GII87_10465 PF16124 RecQ zinc-binding GII87_10465 PF09382 RQC domain GII87_10475 PF02525 Flavodoxin-like fold GII87_10480 PF01258 Prokaryotic dksA/traR C4-type zinc finger GII87_10495 PF00011 Hsp20/alpha crystallin family GII87_10510 PF08000 Bacterial PH domain GII87_10520 PF00171 Aldehyde dehydrogenase family GII87_10525 PF13243 Squalene-hopene cyclase C-terminal domain GII87_10525 PF13249 Squalene-hopene cyclase N-terminal domain GII87_10530 PF02777 Iron/manganese superoxide dismutases, C-terminal domain GII87_10530 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain GII87_10535 PF00209 Sodium:neurotransmitter symporter family GII87_10540 PF01758 Sodium Bile acid symporter family GII87_10545 PF02817 e3 binding domain GII87_10545 PF00364 Biotin-requiring enzyme GII87_10545 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) GII87_10550 PF02779 Transketolase, pyrimidine binding domain GII87_10550 PF16870 2-oxoglutarate dehydrogenase C-terminal GII87_10550 PF00676 Dehydrogenase E1 component GII87_10555 PF00092 von Willebrand factor type A domain GII87_10560 PF07728 AAA domain (dynein-related subfamily) GII87_10565 PF00080 Copper/zinc superoxide dismutase (SODC) GII87_10565 PF13627 Prokaryotic lipoprotein-attachment site GII87_10570 PF01476 LysM domain GII87_10570 PF00877 NlpC/P60 family GII87_10575 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase GII87_10580 PF02457 DisA bacterial checkpoint controller nucleotide-binding GII87_10580 PF10372 Bacterial membrane-spanning protein N-terminus GII87_10585 PF01554 MatE GII87_10590 PF01740 STAS domain GII87_10595 PF02585 GlcNAc-PI de-N-acetylase GII87_10600 PF08830 Protein of unknown function (DUF1806) GII87_10610 PF00892 EamA-like transporter family GII87_10625 PF02447 GntP family permease GII87_10630 PF14552 Tautomerase enzyme GII87_10635 PF01638 HxlR-like helix-turn-helix GII87_10640 PF00881 Nitroreductase family GII87_10645 PF01738 Dienelactone hydrolase family GII87_10650 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily GII87_10655 PF11755 Protein of unknown function (DUF3311) GII87_10660 PF00474 Sodium:solute symporter family GII87_10665 PF17820 PDZ domain GII87_10665 PF01471 Putative peptidoglycan binding domain GII87_10665 PF03572 Peptidase family S41 GII87_10670 PF08241 Methyltransferase domain GII87_10680 PF02557 D-alanyl-D-alanine carboxypeptidase GII87_10685 PF01048 Phosphorylase superfamily GII87_10695 PF14191 YodL-like GII87_10700 PF01569 PAP2 superfamily GII87_10705 PF14162 YozD-like protein GII87_10720 PF06855 YozE SAM-like fold GII87_10725 PF14122 YokU-like protein, putative antitoxin GII87_10730 PF12544 Lysine-2,3-aminomutase GII87_10735 PF00583 Acetyltransferase (GNAT) family GII87_10740 PF07687 Peptidase dimerisation domain GII87_10740 PF01546 Peptidase family M20/M25/M40 GII87_10745 PF01144 Coenzyme A transferase GII87_10750 PF01144 Coenzyme A transferase GII87_10755 PF00202 Aminotransferase class-III GII87_10770 PF00583 Acetyltransferase (GNAT) family GII87_10775 PF00535 Glycosyl transferase family 2 GII87_10790 PF12996 DUF based on E. rectale Gene description (DUF3880) GII87_10795 PF02333 Phytase GII87_10800 PF02719 Polysaccharide biosynthesis protein GII87_10800 PF08485 Polysaccharide biosynthesis protein C-terminal GII87_10815 PF13443 Cro/C1-type HTH DNA-binding domain GII87_10865 PF00149 Calcineurin-like phosphoesterase GII87_10870 PF00269 Small, acid-soluble spore proteins, alpha/beta type GII87_10900 PF06445 GyrI-like small molecule binding domain GII87_10905 PF00692 dUTPase GII87_10910 PF00085 Thioredoxin GII87_10920 PF13392 HNH endonuclease GII87_10930 PF14528 LAGLIDADG-like domain GII87_10930 PF00317 Ribonucleotide reductase, all-alpha domain GII87_10930 PF08343 Ribonucleotide reductase N-terminal GII87_10930 PF02867 Ribonucleotide reductase, barrel domain GII87_10935 PF02867 Ribonucleotide reductase, barrel domain GII87_10935 PF00317 Ribonucleotide reductase, all-alpha domain GII87_10935 PF08343 Ribonucleotide reductase N-terminal GII87_10935 PF14528 LAGLIDADG-like domain GII87_10940 PF07972 NrdI Flavodoxin like GII87_11030 PF00145 C-5 cytosine-specific DNA methylase GII87_11040 PF06941 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C) GII87_11045 PF02223 Thymidylate kinase GII87_11055 PF09629 YorP protein GII87_11070 PF06725 3D domain GII87_11075 PF17657 Bacterial DNA polymerase III alpha subunit finger domain GII87_11075 PF14579 Helix-hairpin-helix motif GII87_11075 PF02811 PHP domain GII87_11075 PF07733 Bacterial DNA polymerase III alpha NTPase domain GII87_11080 PF01368 DHH family GII87_11080 PF17768 RecJ OB domain GII87_11090 PF03796 DnaB-like helicase C terminal domain GII87_11115 PF09636 XkdW protein GII87_11130 PF13229 Right handed beta helix region GII87_11135 PF05908 Poly-gamma-glutamate hydrolase GII87_11150 PF02586 SOS response associated peptidase (SRAP) GII87_11155 PF01068 ATP dependent DNA ligase domain GII87_11185 PF14037 YoqO-like protein GII87_11200 PF01844 HNH endonuclease GII87_11210 PF06908 YspA SLOG family GII87_11240 PF09669 Phage regulatory protein Rha (Phage_pRha) GII87_11240 PF03374 Phage antirepressor protein KilAC domain GII87_11270 PF09643 YopX protein GII87_11290 PF09467 Hypothetical protein Yopt GII87_11295 PF13443 Cro/C1-type HTH DNA-binding domain GII87_11305 PF14072 DNA-sulfur modification-associated GII87_11310 PF00589 Phage integrase family GII87_11310 PF02899 Phage integrase, N-terminal SAM-like domain GII87_11315 PF01381 Helix-turn-helix GII87_11350 PF14163 Super-infection exclusion protein B GII87_11380 PF17094 Uncharacterised protein family (UPF0715) GII87_11385 PF08808 RES domain GII87_11390 PF13443 Cro/C1-type HTH DNA-binding domain GII87_11430 PF01381 Helix-turn-helix GII87_11445 PF00216 Bacterial DNA-binding protein GII87_11455 PF09642 YonK protein GII87_11480 PF03237 Terminase-like family GII87_11565 PF09693 Phage uncharacterised protein (Phage_XkdX) GII87_11580 PF13495 Phage integrase, N-terminal SAM-like domain GII87_11580 PF00589 Phage integrase family GII87_11610 PF10145 Phage-related minor tail protein GII87_11610 PF01464 Transglycosylase SLT domain GII87_11610 PF01551 Peptidase family M23 GII87_11615 PF05709 Phage tail protein GII87_11620 PF06605 Prophage endopeptidase tail GII87_11630 PF09992 Phosphodiester glycosidase GII87_11630 PF12708 Pectate lyase superfamily protein GII87_11645 PF01510 N-acetylmuramoyl-L-alanine amidase GII87_11650 PF10960 BhlA holin family GII87_11655 PF04688 SPP1 phage holin GII87_11660 PF02600 Disulfide bond formation protein DsbB GII87_11665 PF00535 Glycosyl transferase family 2 GII87_11670 PF00085 Thioredoxin GII87_11675 PF00005 ABC transporter GII87_11675 PF03412 Peptidase C39 family GII87_11675 PF00664 ABC transporter transmembrane region GII87_11685 PF06713 Bacterial PH domain GII87_11690 PF00817 impB/mucB/samB family GII87_11690 PF11798 IMS family HHH motif GII87_11690 PF11799 impB/mucB/samB family C-terminal domain GII87_11695 PF08863 YolD-like protein GII87_11710 PF16219 Domain of unknown function (DUF4879) GII87_11720 PF13302 Acetyltransferase (GNAT) domain GII87_11730 PF09346 SMI1 / KNR4 family (SUKH-1) GII87_11735 PF04740 LXG domain of WXG superfamily GII87_11735 PF15652 HNH/Endo VII superfamily toxin with a SHH signature GII87_11740 PF09346 SMI1 / KNR4 family (SUKH-1) GII87_11755 PF05901 Excalibur calcium-binding domain GII87_11755 PF00565 Staphylococcal nuclease homologue GII87_11760 PF14470 Bacterial PH domain GII87_11765 PF02522 Aminoglycoside 3-N-acetyltransferase GII87_11790 PF07508 Recombinase GII87_11790 PF00239 Resolvase, N terminal domain GII87_11795 PF02719 Polysaccharide biosynthesis protein GII87_11800 PF01641 SelR domain GII87_11805 PF01625 Peptide methionine sulfoxide reductase GII87_11810 PF01047 MarR family GII87_11815 PF01554 MatE GII87_11820 PF17431 Uncharacterized YmpT-like GII87_11825 PF09911 Uncharacterized protein conserved in bacteria (DUF2140) GII87_11830 PF13472 GDSL-like Lipase/Acylhydrolase family GII87_11835 PF02630 SCO1/SenC GII87_11840 PF10751 Protein of unknown function (DUF2535) GII87_11845 PF00291 Pyridoxal-phosphate dependent enzyme GII87_11845 PF00585 C-terminal regulatory domain of Threonine dehydratase GII87_11850 PF00158 Sigma-54 interaction domain GII87_11850 PF08461 Ribonuclease R winged-helix domain GII87_11855 PF03006 Haemolysin-III related GII87_11865 PF00186 Dihydrofolate reductase GII87_11870 PF00303 Thymidylate synthase GII87_11875 PF04608 Phosphatidylglycerophosphatase A GII87_11880 PF14005 YpjP-like protein GII87_11885 PF04445 Putative SAM-dependent methyltransferase GII87_11890 PF06491 Disulphide isomerase GII87_11895 PF00920 Dehydratase family GII87_11900 PF13769 Virulence factor GII87_11900 PF08712 Scaffold protein Nfu/NifU N terminal GII87_11905 PF01966 HD domain GII87_11910 PF00255 Glutathione peroxidase GII87_11915 PF04204 Homoserine O-succinyltransferase GII87_11920 PF00534 Glycosyl transferases group 1 GII87_11920 PF06925 Monogalactosyldiacylglycerol (MGDG) synthase GII87_11930 PF00313 'Cold-shock' DNA-binding domain GII87_11940 PF10819 Protein of unknown function (DUF2564) GII87_11945 PF10782 Zinc-finger GII87_11950 PF13456 Reverse transcriptase-like GII87_11955 PF02592 Putative vitamin uptake transporter GII87_11960 PF13456 Reverse transcriptase-like GII87_11970 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain GII87_11970 PF01367 5'-3' exonuclease, C-terminal SAM fold GII87_11980 PF10752 Protein of unknown function (DUF2533) GII87_11985 PF00350 Dynamin family GII87_11995 PF04140 Isoprenylcysteine carboxyl methyltransferase (ICMT) family GII87_12000 PF00195 Chalcone and stilbene synthases, N-terminal domain GII87_12000 PF02797 Chalcone and stilbene synthases, C-terminal domain GII87_12005 PF00860 Permease family GII87_12010 PF00156 Phosphoribosyl transferase domain GII87_12015 PF02074 Carboxypeptidase Taq (M32) metallopeptidase GII87_12020 PF03812 2-keto-3-deoxygluconate permease GII87_12025 PF01081 KDPG and KHG aldolase GII87_12030 PF00294 pfkB family carbohydrate kinase GII87_12035 PF00356 Bacterial regulatory proteins, lacI family GII87_12040 PF04962 KduI/IolB family GII87_12050 PF13307 Helicase C-terminal domain GII87_12060 PF14139 YpzG-like protein GII87_12065 PF01170 Putative RNA methylase family UPF0020 GII87_12065 PF02926 THUMP domain GII87_12075 PF05103 DivIVA protein GII87_12080 PF06908 YspA SLOG family GII87_12085 PF11122 Inner spore coat protein D GII87_12095 PF13482 RNase_H superfamily GII87_12100 PF00271 Helicase conserved C-terminal domain GII87_12100 PF00270 DEAD/DEAH box helicase GII87_12100 PF09369 Domain of unknown function (DUF1998) GII87_12105 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 GII87_12115 PF14179 YppG-like protein GII87_12120 PF14178 YppF-like protein GII87_12125 PF08807 Bacterial domain of unknown function (DUF1798) GII87_12130 PF17522 Family of unknown function (DUF5446) GII87_12140 PF10720 Protein of unknown function (DUF2515) GII87_12145 PF03838 Recombination protein U GII87_12150 PF00912 Transglycosylase GII87_12150 PF00905 Penicillin binding protein transpeptidase domain GII87_12160 PF00730 HhH-GPD superfamily base excision DNA repair protein GII87_12160 PF00633 Helix-hairpin-helix motif GII87_12160 PF10576 Iron-sulfur binding domain of endonuclease III GII87_12165 PF07261 Replication initiation and membrane attachment GII87_12170 PF01336 OB-fold nucleic acid binding domain GII87_12170 PF00152 tRNA synthetases class II (D, K and N) GII87_12175 PF00155 Aminotransferase class I and II GII87_12180 PF03413 Peptidase propeptide and YPEB domain GII87_12180 PF17881 Domain of unknown function (DUF5590) GII87_12185 PF14084 Protein of unknown function (DUF4264) GII87_12190 PF04851 Type III restriction enzyme, res subunit GII87_12190 PF00929 Exonuclease GII87_12190 PF13307 Helicase C-terminal domain GII87_12195 PF02261 Aspartate decarboxylase GII87_12200 PF02569 Pantoate-beta-alanine ligase GII87_12205 PF02548 Ketopantoate hydroxymethyltransferase GII87_12210 PF03099 Biotin/lipoate A/B protein ligase family GII87_12210 PF08279 HTH domain GII87_12210 PF02237 Biotin protein ligase C terminal domain GII87_12215 PF12627 Probable RNA and SrmB- binding site of polymerase A GII87_12215 PF13735 tRNA nucleotidyltransferase domain 2 putative GII87_12215 PF01743 Poly A polymerase head domain GII87_12220 PF13439 Glycosyltransferase Family 4 GII87_12220 PF00534 Glycosyl transferases group 1 GII87_12225 PF02585 GlcNAc-PI de-N-acetylase GII87_12230 PF02142 MGS-like domain GII87_12235 PF01113 Dihydrodipicolinate reductase, N-terminus GII87_12235 PF05173 Dihydrodipicolinate reductase, C-terminus GII87_12240 PF03819 MazG nucleotide pyrophosphohydrolase domain GII87_12245 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 GII87_12245 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) GII87_12250 PF09577 Sporulation protein YpjB (SpoYpjB) GII87_12255 PF07187 Protein of unknown function (DUF1405) GII87_12260 PF00032 Cytochrome b(C-terminal)/b6/petD GII87_12260 PF13442 Cytochrome C oxidase, cbb3-type, subunit III GII87_12265 PF00033 Cytochrome b/b6/petB GII87_12270 PF00355 Rieske [2Fe-2S] domain GII87_12275 PF10673 Protein of unknown function (DUF2487) GII87_12280 PF08864 UPF0302 domain GII87_12280 PF08858 IDEAL domain GII87_12290 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) GII87_12295 PF01842 ACT domain GII87_12295 PF02153 Prephenate dehydrogenase GII87_12300 PF00155 Aminotransferase class I and II GII87_12305 PF00290 Tryptophan synthase alpha chain GII87_12310 PF00291 Pyridoxal-phosphate dependent enzyme GII87_12315 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase GII87_12320 PF00218 Indole-3-glycerol phosphate synthase GII87_12325 PF02885 Glycosyl transferase family, helical bundle domain GII87_12325 PF00591 Glycosyl transferase family, a/b domain GII87_12330 PF00425 chorismate binding enzyme GII87_12330 PF04715 Anthranilate synthase component I, N terminal region GII87_12335 PF07736 Chorismate mutase type I GII87_12340 PF01761 3-dehydroquinate synthase GII87_12345 PF01264 Chorismate synthase GII87_12350 PF03705 CheR methyltransferase, all-alpha domain GII87_12350 PF01739 CheR methyltransferase, SAM binding domain GII87_12355 PF00334 Nucleoside diphosphate kinase GII87_12360 PF00348 Polyprenyl synthetase GII87_12365 PF01209 ubiE/COQ5 methyltransferase family GII87_12370 PF07307 Heptaprenyl diphosphate synthase (HEPPP synthase) subunit 1 GII87_12375 PF02081 Tryptophan RNA-binding attenuator protein GII87_12380 PF01227 GTP cyclohydrolase I GII87_12385 PF00216 Bacterial DNA-binding protein GII87_12390 PF09547 Stage IV sporulation protein A (spore_IV_A) GII87_12400 PF10966 Protein of unknown function (DUF2768) GII87_12405 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus GII87_12405 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus GII87_12410 PF01926 50S ribosome-binding GTPase GII87_12410 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal GII87_12420 PF14045 YIEGIA protein GII87_12430 PF14140 YpzI-like protein GII87_12435 PF01070 FMN-dependent dehydrogenase GII87_12440 PF00575 S1 RNA binding domain GII87_12445 PF02224 Cytidylate kinase GII87_12450 PF17313 Family of unknown function (DUF5359) GII87_12455 PF12945 Flagellar protein YcgR GII87_12455 PF07238 PilZ domain GII87_12460 PF14620 YpeB sporulation GII87_12460 PF03413 Peptidase propeptide and YPEB domain GII87_12465 PF07486 Cell Wall Hydrolase GII87_12465 PF01471 Putative peptidoglycan binding domain GII87_12470 PF13367 PrsW family intramembrane metalloprotease GII87_12480 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase GII87_12480 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain GII87_12485 PF05389 Negative regulator of genetic competence (MecA) GII87_12490 PF00149 Calcineurin-like phosphoesterase GII87_12495 PF10864 Protein of unknown function (DUF2663) GII87_12500 PF01476 LysM domain GII87_12505 PF02517 CPBP intramembrane metalloprotease GII87_12510 PF00271 Helicase conserved C-terminal domain GII87_12510 PF00270 DEAD/DEAH box helicase GII87_12515 PF14493 Helix-turn-helix domain GII87_12525 PF12822 ECF transporter, substrate-specific component GII87_12530 PF01842 ACT domain GII87_12530 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain GII87_12530 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GII87_12535 PF01487 Type I 3-dehydroquinase GII87_12545 PF04542 Sigma-70 region 2 GII87_12545 PF08281 Sigma-70, region 4 GII87_12550 PF00989 PAS fold GII87_12550 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GII87_12550 PF00512 His Kinase A (phospho-acceptor) domain GII87_12550 PF18698 Histidine kinase sensor domain GII87_12550 PF00672 HAMP domain GII87_12555 PF00486 Transcriptional regulatory protein, C terminal GII87_12555 PF00072 Response regulator receiver domain GII87_12560 PF01578 Cytochrome C assembly protein GII87_12565 PF05140 ResB-like family GII87_12570 PF00578 AhpC/TSA family GII87_12575 PF01479 S4 domain GII87_12575 PF00849 RNA pseudouridylate synthase GII87_12580 PF07670 Nucleoside recognition GII87_12585 PF07670 Nucleoside recognition GII87_12590 PF00768 D-alanyl-D-alanine carboxypeptidase GII87_12590 PF07943 Penicillin-binding protein 5, C-terminal domain GII87_12595 PF13047 Protein of unknown function (DUF3907) GII87_12600 PF04079 Segregation and condensation complex subunit ScpB GII87_12605 PF02616 Segregation and condensation protein ScpA GII87_12610 PF03745 Domain of unknown function (DUF309) GII87_12615 PF00583 Acetyltransferase (GNAT) family GII87_12620 PF00885 6,7-dimethyl-8-ribityllumazine synthase GII87_12625 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase GII87_12625 PF00925 GTP cyclohydrolase II GII87_12630 PF00677 Lumazine binding domain GII87_12635 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region GII87_12635 PF01872 RibD C-terminal domain GII87_12645 PF10502 Signal peptidase, peptidase S26 GII87_12655 PF09855 Nucleic-acid-binding protein containing Zn-ribbon domain (DUF2082) GII87_12665 PF10676 Spore germination protein gerPA/gerPF GII87_12670 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD GII87_12675 PF06207 Protein of unknown function (DUF1002) GII87_12680 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain GII87_12680 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain GII87_12685 PF03323 Bacillus/Clostridium GerA spore germination protein GII87_12690 PF14097 Stage V sporulation protein AE1 GII87_12695 PF03862 SpoVAC/SpoVAEB sporulation membrane protein GII87_12700 PF07451 Stage V sporulation protein AD (SpoVAD) GII87_12705 PF03862 SpoVAC/SpoVAEB sporulation membrane protein GII87_12710 PF13782 Stage V sporulation protein AB GII87_12715 PF12164 Stage V sporulation protein AA GII87_12720 PF04542 Sigma-70 region 2 GII87_12720 PF04539 Sigma-70 region 3 GII87_12720 PF04545 Sigma-70, region 4 GII87_12725 PF13581 Histidine kinase-like ATPase domain GII87_12730 PF01740 STAS domain GII87_12735 PF07943 Penicillin-binding protein 5, C-terminal domain GII87_12735 PF00768 D-alanyl-D-alanine carboxypeptidase GII87_12740 PF01048 Phosphorylase superfamily GII87_12745 PF01676 Metalloenzyme superfamily GII87_12750 PF02899 Phage integrase, N-terminal SAM-like domain GII87_12750 PF00589 Phage integrase family GII87_12755 PF14004 Protein of unknown function (DUF4227) GII87_12760 PF01475 Ferric uptake regulator family GII87_12765 PF01944 Stage II sporulation protein M GII87_12775 PF03949 Malic enzyme, NAD binding domain GII87_12775 PF00390 Malic enzyme, N-terminal domain GII87_12775 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain GII87_12780 PF03553 Na+/H+ antiporter family GII87_12785 PF00206 Lyase GII87_12785 PF10415 Fumarase C C-terminus GII87_12790 PF17763 Glutaminase/Asparaginase C-terminal domain GII87_12790 PF00710 Asparaginase, N-terminal GII87_12795 PF01381 Helix-turn-helix GII87_12805 PF00293 NUDIX domain GII87_12810 PF13072 Mother cell inhibitor of FtsZ GII87_12815 PF00248 Aldo/keto reductase family GII87_12820 PF13025 Protein of unknown function (DUF3886) GII87_12825 PF12146 Serine aminopeptidase, S33 GII87_12830 PF10827 Protein of unknown function (DUF2552) GII87_12835 PF01521 Iron-sulphur cluster biosynthesis GII87_12840 PF13673 Acetyltransferase (GNAT) domain GII87_12840 PF04229 GrpB protein GII87_12845 PF03992 Antibiotic biosynthesis monooxygenase GII87_12850 PF00583 Acetyltransferase (GNAT) family GII87_12855 PF08863 YolD-like protein GII87_12860 PF11799 impB/mucB/samB family C-terminal domain GII87_12860 PF00817 impB/mucB/samB family GII87_12865 PF14164 YqzH-like protein GII87_12870 PF07690 Major Facilitator Superfamily GII87_12880 PF00485 Phosphoribulokinase / Uridine kinase family GII87_12885 PF00291 Pyridoxal-phosphate dependent enzyme GII87_12890 PF00106 short chain dehydrogenase GII87_12895 PF00753 Metallo-beta-lactamase superfamily GII87_12900 PF03807 NADP oxidoreductase coenzyme F420-dependent GII87_12900 PF14748 Pyrroline-5-carboxylate reductase dimerisation GII87_12905 PF01546 Peptidase family M20/M25/M40 GII87_12910 PF00724 NADH:flavin oxidoreductase / NADH oxidase family GII87_12915 PF12146 Serine aminopeptidase, S33 GII87_12925 PF12706 Beta-lactamase superfamily domain GII87_12930 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain GII87_12930 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain GII87_12935 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase GII87_12935 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain GII87_12940 PF11798 IMS family HHH motif GII87_12940 PF11799 impB/mucB/samB family C-terminal domain GII87_12940 PF00817 impB/mucB/samB family GII87_12950 PF02096 60Kd inner membrane protein GII87_12955 PF09844 Uncharacterized conserved protein (COG2071) GII87_12960 PF07687 Peptidase dimerisation domain GII87_12960 PF01546 Peptidase family M20/M25/M40 GII87_12965 PF01039 Carboxyl transferase domain GII87_12980 PF03734 L,D-transpeptidase catalytic domain GII87_12985 PF11728 Putative aromatic acid exporter C-terminal domain GII87_12985 PF06081 Aromatic acid exporter family member 1 GII87_12990 PF00005 ABC transporter GII87_12995 PF00528 Binding-protein-dependent transport system inner membrane component GII87_13000 PF00497 Bacterial extracellular solute-binding proteins, family 3 GII87_13005 PF06491 Disulphide isomerase GII87_13010 PF00781 Diacylglycerol kinase catalytic domain GII87_13015 PF07690 Major Facilitator Superfamily GII87_13020 PF06445 GyrI-like small molecule binding domain GII87_13020 PF13411 MerR HTH family regulatory protein GII87_13025 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) GII87_13025 PF02817 e3 binding domain GII87_13025 PF00364 Biotin-requiring enzyme GII87_13030 PF02779 Transketolase, pyrimidine binding domain GII87_13030 PF02780 Transketolase, C-terminal domain GII87_13035 PF00676 Dehydrogenase E1 component GII87_13040 PF07992 Pyridine nucleotide-disulphide oxidoreductase GII87_13040 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GII87_13045 PF00871 Acetokinase family GII87_13050 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase GII87_13050 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain GII87_13055 PF01515 Phosphate acetyl/butaryl transferase GII87_13060 PF00989 PAS fold GII87_13060 PF00158 Sigma-54 interaction domain GII87_13060 PF02954 Bacterial regulatory protein, Fis family GII87_13065 PF11118 Protein of unknown function (DUF2627) GII87_13075 PF03972 MmgE/PrpD family GII87_13080 PF00285 Citrate synthase, C-terminal domain GII87_13085 PF00441 Acyl-CoA dehydrogenase, C-terminal domain GII87_13085 PF02770 Acyl-CoA dehydrogenase, middle domain GII87_13085 PF02771 Acyl-CoA dehydrogenase, N-terminal domain GII87_13090 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain GII87_13090 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain GII87_13095 PF00108 Thiolase, N-terminal domain GII87_13095 PF02803 Thiolase, C-terminal domain GII87_13100 PF03009 Glycerophosphoryl diester phosphodiesterase family GII87_13105 PF01520 N-acetylmuramoyl-L-alanine amidase GII87_13120 PF00724 NADH:flavin oxidoreductase / NADH oxidase family GII87_13125 PF00072 Response regulator receiver domain GII87_13125 PF08769 Sporulation initiation factor Spo0A C terminal GII87_13130 PF17820 PDZ domain GII87_13130 PF05580 SpoIVB peptidase S55 GII87_13135 PF13476 AAA domain GII87_13140 PF02863 Arginine repressor, C-terminal domain GII87_13140 PF01316 Arginine repressor, DNA binding domain GII87_13145 PF01479 S4 domain GII87_13145 PF01728 FtsJ-like methyltransferase GII87_13150 PF02780 Transketolase, C-terminal domain GII87_13150 PF02779 Transketolase, pyrimidine binding domain GII87_13150 PF13292 1-deoxy-D-xylulose-5-phosphate synthase GII87_13155 PF00348 Polyprenyl synthetase GII87_13160 PF02609 Exonuclease VII small subunit GII87_13165 PF02601 Exonuclease VII, large subunit GII87_13165 PF13742 OB-fold nucleic acid binding domain GII87_13170 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain GII87_13170 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain GII87_13175 PF01029 NusB family GII87_13180 PF03780 Asp23 family, cell envelope-related function GII87_13185 PF00289 Biotin carboxylase, N-terminal domain GII87_13185 PF02785 Biotin carboxylase C-terminal domain GII87_13185 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain GII87_13190 PF00364 Biotin-requiring enzyme GII87_13195 PF12685 SpoIIIAH-like protein GII87_13205 PF09581 Stage III sporulation protein AF (Spore_III_AF) GII87_13210 PF09546 Stage III sporulation protein AE (spore_III_AE) GII87_13215 PF06686 Stage III sporulation protein AC/AD protein family GII87_13220 PF06686 Stage III sporulation protein AC/AD protein family GII87_13225 PF09548 Stage III sporulation protein AB (spore_III_AB) GII87_13235 PF10942 Protein of unknown function (DUF2619) GII87_13240 PF01132 Elongation factor P (EF-P) OB domain GII87_13240 PF09285 Elongation factor P, C-terminal GII87_13240 PF08207 Elongation factor P (EF-P) KOW-like domain GII87_13245 PF00557 Metallopeptidase family M24 GII87_13245 PF01321 Creatinase/Prolidase N-terminal domain GII87_13250 PF01220 Dehydroquinase class II GII87_13255 PF11085 Conserved membrane protein YqhR GII87_13260 PF07136 Protein of unknown function (DUF1385) GII87_13270 PF01734 Patatin-like phospholipase GII87_13275 PF01325 Iron dependent repressor, N-terminal DNA binding domain GII87_13275 PF02742 Iron dependent repressor, metal binding and dimerisation domain GII87_13280 PF03099 Biotin/lipoate A/B protein ligase family GII87_13285 PF00581 Rhodanese-like domain GII87_13290 PF02347 Glycine cleavage system P-protein GII87_13295 PF02347 Glycine cleavage system P-protein GII87_13300 PF08669 Glycine cleavage T-protein C-terminal barrel domain GII87_13300 PF01571 Aminomethyltransferase folate-binding domain GII87_13305 PF00271 Helicase conserved C-terminal domain GII87_13305 PF00176 SNF2 family N-terminal domain GII87_13310 PF11079 Bacterial protein YqhG of unknown function GII87_13315 PF08671 Anti-repressor SinI GII87_13320 PF01381 Helix-turn-helix GII87_13320 PF08671 Anti-repressor SinI GII87_13325 PF12389 Camelysin metallo-endopeptidase GII87_13340 PF13028 Protein of unknown function (DUF3889) GII87_13345 PF14038 YqzE-like protein GII87_13350 PF14173 ComG operon protein 7 GII87_13355 PF15980 Putative Competence protein ComGF GII87_13365 PF07963 Prokaryotic N-terminal methylation motif GII87_13370 PF07963 Prokaryotic N-terminal methylation motif GII87_13375 PF00482 Type II secretion system (T2SS), protein F GII87_13380 PF00437 Type II/IV secretion system protein GII87_13385 PF01544 CorA-like Mg2+ transporter protein GII87_13390 PF01595 Cyclin M transmembrane N-terminal domain GII87_13390 PF03471 Transporter associated domain GII87_13390 PF00571 CBS domain GII87_13395 PF14361 RsbT co-antagonist protein rsbRD N-terminal domain GII87_13395 PF01740 STAS domain GII87_13405 PF03960 ArsC family GII87_13410 PF11117 Protein of unknown function (DUF2626) GII87_13415 PF00753 Metallo-beta-lactamase superfamily GII87_13420 PF10958 Protein of unknown function (DUF2759) GII87_13425 PF01910 Thiamine-binding protein GII87_13435 PF00246 Zinc carboxypeptidase GII87_13440 PF00884 Sulfatase GII87_13445 PF00480 ROK family GII87_13450 PF06014 Bacterial protein of unknown function (DUF910) GII87_13455 PF01694 Rhomboid family GII87_13465 PF01812 5-formyltetrahydrofolate cyclo-ligase family GII87_13470 PF00471 Ribosomal protein L33 GII87_13475 PF00534 Glycosyl transferases group 1 GII87_13475 PF13439 Glycosyltransferase Family 4 GII87_13495 PF00005 ABC transporter GII87_13500 PF00005 ABC transporter GII87_13505 PF00528 Binding-protein-dependent transport system inner membrane component GII87_13510 PF00528 Binding-protein-dependent transport system inner membrane component GII87_13515 PF12849 PBP superfamily domain GII87_13525 PF07690 Major Facilitator Superfamily GII87_13530 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain GII87_13530 PF02777 Iron/manganese superoxide dismutases, C-terminal domain GII87_13535 PF04306 Protein of unknown function (DUF456) GII87_13540 PF06691 Protein of unknown function (DUF1189) GII87_13555 PF04551 GcpE protein GII87_13570 PF01475 Ferric uptake regulator family GII87_13575 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 GII87_13575 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) GII87_13580 PF11116 Protein of unknown function (DUF2624) GII87_13585 PF01261 Xylose isomerase-like TIM barrel GII87_13590 PF00270 DEAD/DEAH box helicase GII87_13590 PF00271 Helicase conserved C-terminal domain GII87_13595 PF14181 YqfQ-like protein GII87_13600 PF02401 LytB protein GII87_13605 PF01784 NIF3 (NGG1p interacting factor 3) GII87_13610 PF04816 tRNA (adenine(22)-N(1))-methyltransferase GII87_13615 PF13442 Cytochrome C oxidase, cbb3-type, subunit III GII87_13620 PF03979 Sigma-70 factor, region 1.1 GII87_13620 PF04542 Sigma-70 region 2 GII87_13620 PF04539 Sigma-70 region 3 GII87_13620 PF04545 Sigma-70, region 4 GII87_13620 PF00140 Sigma-70 factor, region 1.2 GII87_13625 PF01807 CHC2 zinc finger GII87_13625 PF08275 DNA primase catalytic core, N-terminal domain GII87_13625 PF10410 DnaB-helicase binding domain of primase GII87_13630 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 GII87_13635 PF03618 Kinase/pyrophosphorylase GII87_13640 PF00571 CBS domain GII87_13640 PF08279 HTH domain GII87_13645 PF02092 Glycyl-tRNA synthetase beta subunit GII87_13650 PF02091 Glycyl-tRNA synthetase alpha subunit GII87_13655 PF11967 Recombination protein O N terminal GII87_13655 PF02565 Recombination protein O C terminal GII87_13660 PF14006 YqzL-like protein GII87_13665 PF01926 50S ribosome-binding GTPase GII87_13665 PF07650 KH domain GII87_13670 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region GII87_13675 PF01219 Prokaryotic diacylglycerol kinase GII87_13680 PF02130 Uncharacterized protein family UPF0054 GII87_13685 PF07698 7TM receptor with intracellular HD hydrolase GII87_13685 PF07697 7TM-HD extracellular GII87_13685 PF01966 HD domain GII87_13690 PF02562 PhoH-like protein GII87_13695 PF06898 Putative stage IV sporulation protein YqfD GII87_13700 PF07873 YabP family GII87_13710 PF12127 SigmaW regulon antibacterial GII87_13715 PF01957 NfeD-like C-terminal, partner-binding GII87_13715 PF01972 Serine dehydrogenase proteinase GII87_13720 PF09424 Yqey-like protein GII87_13725 PF01165 Ribosomal protein S21 GII87_13730 PF02690 Na+/Pi-cotransporter GII87_13735 PF04055 Radical SAM superfamily GII87_13735 PF01938 TRAM domain GII87_13735 PF00919 Uncharacterized protein family UPF0004 GII87_13740 PF04452 RNA methyltransferase GII87_13750 PF00226 DnaJ domain GII87_13750 PF00684 DnaJ central domain GII87_13750 PF01556 DnaJ C terminal domain GII87_13755 PF00012 Hsp70 protein GII87_13760 PF01025 GrpE GII87_13765 PF01628 HrcA protein C terminal domain GII87_13770 PF04055 Radical SAM superfamily GII87_13770 PF06969 HemN C-terminal domain GII87_13775 PF03144 Elongation factor Tu domain 2 GII87_13775 PF06421 GTP-binding protein LepA C-terminus GII87_13775 PF00679 Elongation factor G C-terminus GII87_13775 PF00009 Elongation factor Tu GTP binding domain GII87_13780 PF12438 Protein of unknown function (DUF3679) GII87_13785 PF07454 Stage II sporulation protein P (SpoIIP) GII87_13790 PF03418 Germination protease GII87_13795 PF01649 Ribosomal protein S20 GII87_13800 PF06144 DNA polymerase III, delta subunit GII87_13810 PF14141 YqzM-like protein GII87_13815 PF00753 Metallo-beta-lactamase superfamily GII87_13815 PF13567 Domain of unknown function (DUF4131) GII87_13815 PF03772 Competence protein GII87_13820 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region GII87_13825 PF10531 SLBB domain GII87_13830 PF03807 NADP oxidoreductase coenzyme F420-dependent GII87_13830 PF14748 Pyrroline-5-carboxylate reductase dimerisation GII87_13835 PF13649 Methyltransferase domain GII87_13845 PF01966 HD domain GII87_13850 PF01467 Cytidylyltransferase-like GII87_13855 PF01985 CRS1 / YhbY (CRM) domain GII87_13860 PF18317 Shikimate 5'-dehydrogenase C-terminal domain GII87_13860 PF08501 Shikimate dehydrogenase substrate binding domain GII87_13860 PF01488 Shikimate / quinate 5-dehydrogenase GII87_13865 PF01926 50S ribosome-binding GTPase GII87_13875 PF08970 Sporulation inhibitor A GII87_13880 PF00657 GDSL-like Lipase/Acylhydrolase GII87_13885 PF01471 Putative peptidoglycan binding domain GII87_13885 PF01510 N-acetylmuramoyl-L-alanine amidase GII87_13890 PF09335 SNARE associated Golgi protein GII87_13895 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain GII87_13895 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase GII87_13905 PF14040 Deoxyribonuclease NucA/NucB GII87_13915 PF00239 Resolvase, N terminal domain GII87_13915 PF07508 Recombinase GII87_13915 PF13408 Recombinase zinc beta ribbon domain GII87_13920 PF01451 Low molecular weight phosphotyrosine protein phosphatase GII87_13925 PF01758 Sodium Bile acid symporter family GII87_13930 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily GII87_13935 PF01022 Bacterial regulatory protein, arsR family GII87_13940 PF08892 YqcI/YcgG family GII87_13945 PF18801 response regulator aspartate phosphatase H, N terminal GII87_13945 PF13181 Tetratricopeptide repeat GII87_13960 PF14449 Pre-toxin TG GII87_13960 PF04740 LXG domain of WXG superfamily GII87_13960 PF14410 HNH/ENDO VII superfamily nuclease with conserved GHE residues GII87_13965 PF05076 Suppressor of fused protein (SUFU) GII87_13985 PF01510 N-acetylmuramoyl-L-alanine amidase GII87_13985 PF01471 Putative peptidoglycan binding domain GII87_13990 PF05105 Bacteriophage holin family GII87_14000 PF09693 Phage uncharacterised protein (Phage_XkdX) GII87_14005 PF09636 XkdW protein GII87_14020 PF10076 Uncharacterised protein conserved in bacteria (DUF2313) GII87_14025 PF04865 Baseplate J-like protein GII87_14030 PF10934 Protein of unknown function (DUF2634) GII87_14035 PF10844 Protein of unknown function (DUF2577) GII87_14045 PF01476 LysM domain GII87_14050 PF01464 Transglycosylase SLT domain GII87_14060 PF08890 Phage XkdN-like tail assembly chaperone protein, TAC GII87_14075 PF09393 Phage tail tube protein GII87_14080 PF17482 Phage tail sheath C-terminal domain GII87_14080 PF17481 Phage tail sheath protein beta-sandwich domain GII87_14080 PF04984 Phage tail sheath protein subtilisin-like domain GII87_14095 PF04883 Bacteriophage HK97-gp10, putative tail-component GII87_14100 PF12206 Domain of unknown function (DUF3599) GII87_14105 PF11436 Protein of unknown function (DUF3199) GII87_14110 PF14553 YqbF, hypothetical protein domain GII87_14115 PF05065 Phage capsid family GII87_14120 PF14550 Putative phage serine protease XkdF GII87_14130 PF04233 Phage Mu protein F like protein GII87_14135 PF04860 Phage portal protein GII87_14140 PF04466 Phage terminase large subunit GII87_14140 PF17288 Terminase RNAseH like domain GII87_14145 PF10668 Phage terminase small subunit GII87_14165 PF17356 Phage-like element PBSX protein XtrA GII87_14170 PF05866 Endodeoxyribonuclease RusA GII87_14180 PF01695 IstB-like ATP binding protein GII87_14185 PF07261 Replication initiation and membrane attachment GII87_14190 PF03837 RecT family GII87_14195 PF09588 YqaJ-like viral recombinase domain GII87_14200 PF09466 Hypothetical protein Yqai GII87_14210 PF17448 Uncharacterized YqaH-like GII87_14215 PF01381 Helix-turn-helix GII87_14225 PF01381 Helix-turn-helix GII87_14230 PF01381 Helix-turn-helix GII87_14245 PF06114 IrrE N-terminal-like domain GII87_14270 PF06146 Phosphate-starvation-inducible E GII87_14275 PF00512 His Kinase A (phospho-acceptor) domain GII87_14280 PF00486 Transcriptional regulatory protein, C terminal GII87_14280 PF00072 Response regulator receiver domain GII87_14285 PF04235 Protein of unknown function (DUF418) GII87_14295 PF00583 Acetyltransferase (GNAT) family GII87_14300 PF02525 Flavodoxin-like fold GII87_14305 PF13787 Protein of unknown function with HXXEE motif GII87_14310 PF01925 Sulfite exporter TauE/SafE GII87_14315 PF01206 Sulfurtransferase TusA GII87_14320 PF00581 Rhodanese-like domain GII87_14320 PF00753 Metallo-beta-lactamase superfamily GII87_14330 PF00581 Rhodanese-like domain GII87_14330 PF01206 Sulfurtransferase TusA GII87_14340 PF13686 DsrE/DsrF/DrsH-like family GII87_14345 PF02583 Metal-sensitive transcriptional repressor GII87_14355 PF07883 Cupin domain GII87_14365 PF13411 MerR HTH family regulatory protein GII87_14365 PF06445 GyrI-like small molecule binding domain GII87_14370 PF07690 Major Facilitator Superfamily GII87_14375 PF00583 Acetyltransferase (GNAT) family GII87_14380 PF03471 Transporter associated domain GII87_14380 PF00571 CBS domain GII87_14380 PF01595 Cyclin M transmembrane N-terminal domain GII87_14385 PF14142 YrzO-like protein GII87_14390 PF00892 EamA-like transporter family GII87_14395 PF03466 LysR substrate binding domain GII87_14395 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GII87_14405 PF01545 Cation efflux family GII87_14405 PF16916 Dimerisation domain of Zinc Transporter GII87_14410 PF14552 Tautomerase enzyme GII87_14415 PF03466 LysR substrate binding domain GII87_14415 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GII87_14425 PF05525 Branched-chain amino acid transport protein GII87_14430 PF05437 Branched-chain amino acid transport protein (AzlD) GII87_14435 PF03591 AzlC protein GII87_14440 PF01037 Lrp/AsnC ligand binding domain GII87_14445 PF01337 Barstar (barnase inhibitor) GII87_14450 PF00067 Cytochrome P450 GII87_14460 PF00857 Isochorismatase family GII87_14465 PF10823 Protein of unknown function (DUF2568) GII87_14470 PF05163 DinB family GII87_14475 PF04439 Streptomycin adenylyltransferase GII87_14480 PF03060 Nitronate monooxygenase GII87_14485 PF01177 Asp/Glu/Hydantoin racemase GII87_14490 PF15493 Domain of unknown function, YrpD GII87_14500 PF09680 Family of unknown function GII87_14510 PF09223 ZinT (YodA) periplasmic lipocalin-like zinc-recruitment GII87_14520 PF00248 Aldo/keto reductase family GII87_14525 PF03600 Citrate transporter GII87_14530 PF03466 LysR substrate binding domain GII87_14530 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GII87_14535 PF04303 PrpF protein GII87_14540 PF01374 Glycosyl hydrolase family 46 GII87_14550 PF00561 alpha/beta hydrolase fold GII87_14570 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily GII87_14580 PF07875 Coat F domain GII87_14585 PF00107 Zinc-binding dehydrogenase GII87_14585 PF13823 Alcohol dehydrogenase GroES-associated GII87_14585 PF08240 Alcohol dehydrogenase GroES-like domain GII87_14595 PF07875 Coat F domain GII87_14600 PF13411 MerR HTH family regulatory protein GII87_14610 PF00107 Zinc-binding dehydrogenase GII87_14610 PF08240 Alcohol dehydrogenase GroES-like domain GII87_14615 PF01965 DJ-1/PfpI family GII87_14620 PF08244 Glycosyl hydrolases family 32 C terminal GII87_14620 PF00251 Glycosyl hydrolases family 32 N-terminal domain GII87_14625 PF03613 PTS system mannose/fructose/sorbose family IID component GII87_14630 PF03609 PTS system sorbose-specific iic component GII87_14635 PF03830 PTS system sorbose subfamily IIB component GII87_14640 PF03610 PTS system fructose IIA component GII87_14645 PF03610 PTS system fructose IIA component GII87_14645 PF00874 PRD domain GII87_14645 PF00158 Sigma-54 interaction domain GII87_14655 PF00324 Amino acid permease GII87_14660 PF01810 LysE type translocator GII87_14665 PF01978 Sugar-specific transcriptional regulator TrmB GII87_14665 PF11495 Archaeal transcriptional regulator TrmB GII87_14670 PF04542 Sigma-70 region 2 GII87_14670 PF08281 Sigma-70, region 4 GII87_14675 PF13739 Deacetylase PdaC GII87_14675 PF11738 Protein of unknown function (DUF3298) GII87_14680 PF01757 Acyltransferase family GII87_14685 PF14145 YrhK-like protein GII87_14690 PF00667 FAD binding domain GII87_14690 PF00067 Cytochrome P450 GII87_14690 PF00258 Flavodoxin GII87_14690 PF00175 Oxidoreductase NAD-binding domain GII87_14695 PF00440 Bacterial regulatory proteins, tetR family GII87_14695 PF16295 Tetracyclin repressor-like, C-terminal domain GII87_14700 PF08241 Methyltransferase domain GII87_14710 PF09501 Probable sporulation protein (Bac_small_yrzI) GII87_14715 PF01226 Formate/nitrite transporter GII87_14720 PF10057 Uncharacterized conserved protein (DUF2294) GII87_14725 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region GII87_14725 PF04879 Molybdopterin oxidoreductase Fe4S4 domain GII87_14725 PF01568 Molydopterin dinucleotide binding domain GII87_14725 PF00384 Molybdopterin oxidoreductase GII87_14725 PF00037 4Fe-4S binding domain GII87_14730 PF07849 Protein of unknown function (DUF1641) GII87_14735 PF14143 YrhC-like protein GII87_14740 PF01053 Cys/Met metabolism PLP-dependent enzyme GII87_14745 PF00291 Pyridoxal-phosphate dependent enzyme GII87_14750 PF01048 Phosphorylase superfamily GII87_14755 PF13649 Methyltransferase domain GII87_14760 PF10750 Protein of unknown function (DUF2536) GII87_14765 PF07423 Domain of unknown function (DUF1510) GII87_14770 PF00905 Penicillin binding protein transpeptidase domain GII87_14770 PF03717 Penicillin-binding Protein dimerisation domain GII87_14775 PF01272 Transcription elongation factor, GreA/GreB, C-term GII87_14775 PF03449 Transcription elongation factor, N-terminal GII87_14780 PF00485 Phosphoribulokinase / Uridine kinase family GII87_14800 PF02618 YceG-like family GII87_14805 PF06949 Protein of unknown function (DUF1292) GII87_14810 PF03652 Holliday junction resolvase GII87_14815 PF06135 IreB regulatory phosphoprotein GII87_14820 PF02272 DHHA1 domain GII87_14820 PF01411 tRNA synthetases class II (A) GII87_14820 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain GII87_14825 PF01594 AI-2E family transporter GII87_14830 PF00005 ABC transporter GII87_14835 PF00497 Bacterial extracellular solute-binding proteins, family 3 GII87_14840 PF00528 Binding-protein-dependent transport system inner membrane component GII87_14845 PF00528 Binding-protein-dependent transport system inner membrane component GII87_14850 PF13056 Protein of unknown function (DUF3918) GII87_14860 PF05239 PRC-barrel domain GII87_14865 PF14490 Helix-hairpin-helix containing domain GII87_14865 PF13538 UvrD-like helicase C-terminal domain GII87_14865 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain GII87_14870 PF13181 Tetratricopeptide repeat GII87_14870 PF07719 Tetratricopeptide repeat GII87_14880 PF00266 Aminotransferase class-V GII87_14885 PF02082 Transcriptional regulator GII87_14890 PF12002 MgsA AAA+ ATPase C terminal GII87_14890 PF05496 Holliday junction DNA helicase RuvB P-loop domain GII87_14890 PF16193 AAA C-terminal domain GII87_14895 PF00899 ThiF family GII87_14905 PF01336 OB-fold nucleic acid binding domain GII87_14905 PF02938 GAD domain GII87_14905 PF00152 tRNA synthetases class II (D, K and N) GII87_14910 PF03129 Anticodon binding domain GII87_14910 PF13393 Histidyl-tRNA synthetase GII87_14915 PF17449 Uncharacterized YrzK-like GII87_14920 PF01520 N-acetylmuramoyl-L-alanine amidase GII87_14920 PF08239 Bacterial SH3 domain GII87_14925 PF02580 D-Tyr-tRNA(Tyr) deacylase GII87_14930 PF02824 TGS domain GII87_14930 PF04607 Region found in RelA / SpoT proteins GII87_14930 PF13291 ACT domain GII87_14935 PF00156 Phosphoribosyl transferase domain GII87_14940 PF17768 RecJ OB domain GII87_14940 PF10141 Single-strand DNA-specific exonuclease, C terminal domain GII87_14940 PF01368 DHH family GII87_14940 PF02272 DHHA1 domain GII87_14945 PF06305 Lipopolysaccharide assembly protein A domain GII87_14950 PF02080 TrkA-C domain GII87_14955 PF07549 SecD/SecF GG Motif GII87_14955 PF02355 Protein export membrane protein GII87_14960 PF13797 Post-transcriptional regulator GII87_14965 PF14667 Polysaccharide biosynthesis C-terminal domain GII87_14965 PF01943 Polysaccharide biosynthesis protein GII87_14970 PF04239 Protein of unknown function (DUF421) GII87_14975 PF12670 Protein of unknown function (DUF3792) GII87_14980 PF02699 Preprotein translocase subunit GII87_14985 PF01702 Queuine tRNA-ribosyltransferase GII87_14990 PF02547 Queuosine biosynthesis protein GII87_14995 PF11146 Protein of unknown function (DUF2905) GII87_15000 PF05496 Holliday junction DNA helicase RuvB P-loop domain GII87_15000 PF05491 RuvB C-terminal winged helix domain GII87_15000 PF17864 RuvB AAA lid domain GII87_15005 PF01330 RuvA N terminal domain GII87_15005 PF07499 RuvA, C-terminal domain GII87_15010 PF08977 Bypass of Forespore C, N terminal GII87_15010 PF08955 BofC C-terminal domain GII87_15015 PF07690 Major Facilitator Superfamily GII87_15020 PF02894 Oxidoreductase family, C-terminal alpha/beta domain GII87_15020 PF01408 Oxidoreductase family, NAD-binding Rossmann fold GII87_15045 PF01235 Sodium:alanine symporter family GII87_15050 PF01709 Transcriptional regulator GII87_15055 PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) GII87_15060 PF01476 LysM domain GII87_15065 PF02445 Quinolinate synthetase A protein GII87_15070 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain GII87_15070 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain GII87_15075 PF02910 Fumarate reductase flavoprotein C-term GII87_15075 PF00890 FAD binding domain GII87_15080 PF00266 Aminotransferase class-V GII87_15085 PF02829 3H domain GII87_15085 PF08279 HTH domain GII87_15090 PF00800 Prephenate dehydratase GII87_15090 PF01842 ACT domain GII87_15095 PF01842 ACT domain GII87_15100 PF09269 Domain of unknown function (DUF1967) GII87_15100 PF01926 50S ribosome-binding GTPase GII87_15100 PF01018 GTP1/OBG GII87_15105 PF14682 Sporulation initiation phospho-transferase B, C-terminal GII87_15105 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain GII87_15115 PF01016 Ribosomal L27 protein GII87_15120 PF04327 Cysteine protease Prp GII87_15125 PF00829 Ribosomal prokaryotic L21 protein GII87_15130 PF02163 Peptidase family M50 GII87_15135 PF01551 Peptidase family M23 GII87_15140 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain GII87_15145 PF03775 Septum formation inhibitor MinC, C-terminal domain GII87_15150 PF04093 rod shape-determining protein MreD GII87_15155 PF04085 rod shape-determining protein MreC GII87_15165 PF04002 RadC-like JAB domain GII87_15165 PF00633 Helix-hairpin-helix motif GII87_15170 PF02545 Maf-like protein GII87_15175 PF05036 Sporulation related domain GII87_15180 PF06750 Bacterial Peptidase A24 N-terminal domain GII87_15180 PF01478 Type IV leader peptidase family GII87_15185 PF08245 Mur ligase middle domain GII87_15185 PF02875 Mur ligase family, glutamate ligase domain GII87_15190 PF08264 Anticodon-binding domain of tRNA GII87_15190 PF00133 tRNA synthetases class I (I, L, M and V) GII87_15190 PF10458 Valyl tRNA synthetase tRNA binding arm GII87_15205 PF01476 LysM domain GII87_15210 PF00202 Aminotransferase class-III GII87_15215 PF00490 Delta-aminolevulinic acid dehydratase GII87_15220 PF02602 Uroporphyrinogen-III synthase HemD GII87_15225 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain GII87_15225 PF03900 Porphobilinogen deaminase, C-terminal domain GII87_15230 PF01578 Cytochrome C assembly protein GII87_15235 PF01488 Shikimate / quinate 5-dehydrogenase GII87_15235 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain GII87_15235 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain GII87_15245 PF01926 50S ribosome-binding GTPase GII87_15250 PF02190 ATP-dependent protease La (LON) substrate-binding domain GII87_15250 PF00004 ATPase family associated with various cellular activities (AAA) GII87_15250 PF05362 Lon protease (S16) C-terminal proteolytic domain GII87_15255 PF00004 ATPase family associated with various cellular activities (AAA) GII87_15255 PF05362 Lon protease (S16) C-terminal proteolytic domain GII87_15260 PF06689 ClpX C4-type zinc finger GII87_15260 PF07724 AAA domain (Cdc48 subfamily) GII87_15260 PF10431 C-terminal, D2-small domain, of ClpB protein GII87_15265 PF05697 Bacterial trigger factor protein (TF) GII87_15265 PF05698 Bacterial trigger factor protein (TF) C-terminus GII87_15265 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase GII87_15275 PF00694 Aconitase C-terminal domain GII87_15280 PF00330 Aconitase family (aconitate hydratase) GII87_15285 PF00180 Isocitrate/isopropylmalate dehydrogenase GII87_15290 PF08502 LeuA allosteric (dimerisation) domain GII87_15290 PF00682 HMGL-like GII87_15295 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain GII87_15295 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain GII87_15300 PF01842 ACT domain GII87_15300 PF10369 Small subunit of acetolactate synthase GII87_15305 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain GII87_15305 PF00205 Thiamine pyrophosphate enzyme, central domain GII87_15305 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain GII87_15315 PF00583 Acetyltransferase (GNAT) family GII87_15320 PF11181 Heat induced stress protein YflT GII87_15320 PF09557 Domain of unknown function (DUF2382) GII87_15330 PF12850 Calcineurin-like phosphoesterase superfamily domain GII87_15335 PF01725 Ham1 family GII87_15340 PF03725 3' exoribonuclease family, domain 2 GII87_15340 PF01138 3' exoribonuclease family, domain 1 GII87_15345 PF10646 Sporulation and spore germination GII87_15350 PF01177 Asp/Glu/Hydantoin racemase GII87_15355 PF01047 MarR family GII87_15360 PF00196 Bacterial regulatory proteins, luxR family GII87_15365 PF03061 Thioesterase superfamily GII87_15370 PF13183 4Fe-4S dicluster domain GII87_15370 PF13085 2Fe-2S iron-sulfur cluster binding domain GII87_15375 PF02910 Fumarate reductase flavoprotein C-term GII87_15375 PF00890 FAD binding domain GII87_15380 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit GII87_15385 PF10702 Protein of unknown function (DUF2507) GII87_15390 PF00696 Amino acid kinase family GII87_15390 PF01842 ACT domain GII87_15390 PF13840 ACT domain GII87_15395 PF01541 GIY-YIG catalytic domain GII87_15395 PF02151 UvrB/uvrC motif GII87_15395 PF08459 UvrC Helix-hairpin-helix N-terminal GII87_15400 PF00085 Thioredoxin GII87_15405 PF06964 Alpha-L-arabinofuranosidase C-terminal domain GII87_15410 PF01012 Electron transfer flavoprotein domain GII87_15410 PF00766 Electron transfer flavoprotein FAD-binding domain GII87_15415 PF01012 Electron transfer flavoprotein domain GII87_15420 PF00378 Enoyl-CoA hydratase/isomerase GII87_15425 PF00440 Bacterial regulatory proteins, tetR family GII87_15425 PF08359 YsiA-like protein, C-terminal region GII87_15430 PF13193 AMP-binding enzyme C-terminal domain GII87_15430 PF00501 AMP-binding enzyme GII87_15435 PF03994 Domain of Unknown Function (DUF350) GII87_15440 PF00488 MutS domain V GII87_15440 PF01713 Smr domain GII87_15445 PF14716 Helix-hairpin-helix domain GII87_15445 PF14791 DNA polymerase beta thumb GII87_15445 PF02811 PHP domain GII87_15450 PF02674 Colicin V production protein GII87_15455 PF05164 Cell division protein ZapA GII87_15460 PF11858 Domain of unknown function (DUF3378) GII87_15460 PF01351 Ribonuclease HII GII87_15465 PF03484 tRNA synthetase B5 domain GII87_15465 PF03483 B3/4 domain GII87_15465 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain GII87_15465 PF01588 Putative tRNA binding domain GII87_15465 PF03147 Ferredoxin-fold anticodon binding domain GII87_15470 PF01409 tRNA synthetases class II core domain (F) GII87_15470 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain GII87_15480 PF00588 SpoU rRNA Methylase family GII87_15480 PF08032 RNA 2'-O ribose methyltransferase substrate binding GII87_15485 PF14098 Small, acid-soluble spore protein I GII87_15490 PF13556 PucR C-terminal helix-turn-helix domain GII87_15490 PF17853 GGDEF-like domain GII87_15490 PF05651 Putative sugar diacid recognition GII87_15495 PF02913 FAD linked oxidases, C-terminal domain GII87_15495 PF01565 FAD binding domain GII87_15500 PF13183 4Fe-4S dicluster domain GII87_15500 PF02754 Cysteine-rich domain GII87_15505 PF12681 Glyoxalase-like domain GII87_15515 PF13722 5TM C-terminal transporter carbon starvation CstA GII87_15515 PF02554 Carbon starvation protein CstA GII87_15520 PF06964 Alpha-L-arabinofuranosidase C-terminal domain GII87_15525 PF00528 Binding-protein-dependent transport system inner membrane component GII87_15530 PF00528 Binding-protein-dependent transport system inner membrane component GII87_15535 PF01547 Bacterial extracellular solute-binding protein GII87_15540 PF13685 Iron-containing alcohol dehydrogenase GII87_15545 PF13344 Haloacid dehalogenase-like hydrolase GII87_15550 PF00596 Class II Aldolase and Adducin N-terminal domain GII87_15555 PF02782 FGGY family of carbohydrate kinases, C-terminal domain GII87_15555 PF00370 FGGY family of carbohydrate kinases, N-terminal domain GII87_15560 PF11762 L-arabinose isomerase C-terminal domain GII87_15560 PF02610 L-arabinose isomerase GII87_15565 PF04616 Glycosyl hydrolases family 43 GII87_15570 PF05343 M42 glutamyl aminopeptidase GII87_15580 PF06961 Protein of unknown function (DUF1294) GII87_15585 PF00453 Ribosomal protein L20 GII87_15590 PF01632 Ribosomal protein L35 GII87_15595 PF00707 Translation initiation factor IF-3, C-terminal domain GII87_15595 PF05198 Translation initiation factor IF-3, N-terminal domain GII87_15605 PF04172 LrgB-like family GII87_15610 PF03788 LrgA family GII87_15615 PF00072 Response regulator receiver domain GII87_15615 PF04397 LytTr DNA-binding domain GII87_15620 PF07694 5TMR of 5TMR-LYT GII87_15620 PF06580 Histidine kinase GII87_15620 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GII87_15630 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) GII87_15630 PF02824 TGS domain GII87_15630 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain GII87_15630 PF03129 Anticodon binding domain GII87_15635 PF08812 YtxC-like family GII87_15640 PF09335 SNARE associated Golgi protein GII87_15645 PF07319 Primosomal protein DnaI N-terminus GII87_15645 PF01695 IstB-like ATP binding protein GII87_15650 PF07261 Replication initiation and membrane attachment GII87_15655 PF03477 ATP cone domain GII87_15660 PF02675 S-adenosylmethionine decarboxylase GII87_15665 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain GII87_15665 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain GII87_15670 PF01638 HxlR-like helix-turn-helix GII87_15675 PF07690 Major Facilitator Superfamily GII87_15680 PF00248 Aldo/keto reductase family GII87_15685 PF01121 Dephospho-CoA kinase GII87_15690 PF02659 Putative manganese efflux pump GII87_15695 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain GII87_15695 PF06827 Zinc finger found in FPG and IleRS GII87_15695 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain GII87_15700 PF00476 DNA polymerase family A GII87_15700 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain GII87_15700 PF01367 5'-3' exonuclease, C-terminal SAM fold GII87_15705 PF16736 Single Cache-like GII87_15705 PF00989 PAS fold GII87_15705 PF00512 His Kinase A (phospho-acceptor) domain GII87_15705 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GII87_15710 PF00072 Response regulator receiver domain GII87_15710 PF00486 Transcriptional regulatory protein, C terminal GII87_15715 PF00056 lactate/malate dehydrogenase, NAD binding domain GII87_15715 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain GII87_15720 PF00180 Isocitrate/isopropylmalate dehydrogenase GII87_15725 PF00285 Citrate synthase, C-terminal domain GII87_15730 PF04284 Protein of unknown function (DUF441) GII87_15735 PF01594 AI-2E family transporter GII87_15740 PF04186 FxsA cytoplasmic membrane protein GII87_15745 PF00391 PEP-utilising enzyme, mobile domain GII87_15745 PF00224 Pyruvate kinase, barrel domain GII87_15745 PF02887 Pyruvate kinase, alpha/beta domain GII87_15750 PF00365 Phosphofructokinase GII87_15755 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit GII87_15760 PF01039 Carboxyl transferase domain GII87_15760 PF17848 Acetyl-coA carboxylase zinc finger domain GII87_15765 PF00390 Malic enzyme, N-terminal domain GII87_15765 PF03949 Malic enzyme, NAD binding domain GII87_15770 PF17657 Bacterial DNA polymerase III alpha subunit finger domain GII87_15770 PF14579 Helix-hairpin-helix motif GII87_15770 PF01336 OB-fold nucleic acid binding domain GII87_15770 PF02811 PHP domain GII87_15770 PF07733 Bacterial DNA polymerase III alpha NTPase domain GII87_15775 PF14034 Sporulation protein YtrH GII87_15790 PF02272 DHHA1 domain GII87_15790 PF01368 DHH family GII87_15795 PF14007 YtpI-like protein GII87_15800 PF00392 Bacterial regulatory proteins, gntR family GII87_15800 PF00571 CBS domain GII87_15800 PF07085 DRTGG domain GII87_15800 PF03061 Thioesterase superfamily GII87_15805 PF01925 Sulfite exporter TauE/SafE GII87_15810 PF07687 Peptidase dimerisation domain GII87_15810 PF01546 Peptidase family M20/M25/M40 GII87_15815 PF01687 Riboflavin kinase GII87_15820 PF00296 Luciferase-like monooxygenase GII87_15825 PF00462 Glutaredoxin GII87_15830 PF00296 Luciferase-like monooxygenase GII87_15835 PF00005 ABC transporter GII87_15840 PF00528 Binding-protein-dependent transport system inner membrane component GII87_15845 PF00528 Binding-protein-dependent transport system inner membrane component GII87_15850 PF00497 Bacterial extracellular solute-binding proteins, family 3 GII87_15855 PF00497 Bacterial extracellular solute-binding proteins, family 3 GII87_15860 PF00583 Acetyltransferase (GNAT) family GII87_15865 PF03466 LysR substrate binding domain GII87_15865 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GII87_15885 PF00206 Lyase GII87_15885 PF14698 Argininosuccinate lyase C-terminal GII87_15890 PF00764 Arginosuccinate synthase GII87_15895 PF00994 Probable molybdopterin binding domain GII87_15900 PF00871 Acetokinase family GII87_15910 PF02384 N-6 DNA Methylase GII87_15915 PF08534 Redoxin GII87_15920 PF09579 Sporulation protein YtfJ (Spore_YtfJ) GII87_15925 PF11167 Protein of unknown function (DUF2953) GII87_15930 PF06271 RDD family GII87_15935 PF01343 Peptidase family S49 GII87_15940 PF01513 ATP-NAD kinase GII87_15945 PF07969 Amidohydrolase family GII87_15950 PF00501 AMP-binding enzyme GII87_15950 PF13193 AMP-binding enzyme C-terminal domain GII87_15955 PF00269 Small, acid-soluble spore proteins, alpha/beta type GII87_15960 PF02568 Thiamine biosynthesis protein (ThiI) GII87_15960 PF02926 THUMP domain GII87_15965 PF00266 Aminotransferase class-V GII87_15970 PF05525 Branched-chain amino acid transport protein GII87_15975 PF06160 Septation ring formation regulator, EzrA GII87_15980 PF02811 PHP domain GII87_15985 PF00440 Bacterial regulatory proteins, tetR family GII87_15990 PF13185 GAF domain GII87_15995 PF00990 Diguanylate cyclase, GGDEF domain GII87_16005 PF00163 Ribosomal protein S4/S9 N-terminal domain GII87_16005 PF01479 S4 domain GII87_16010 PF00579 tRNA synthetases class I (W and Y) GII87_16010 PF01479 S4 domain GII87_16015 PF00501 AMP-binding enzyme GII87_16015 PF13193 AMP-binding enzyme C-terminal domain GII87_16020 PF00583 Acetyltransferase (GNAT) family GII87_16025 PF00571 CBS domain GII87_16030 PF00850 Histone deacetylase domain GII87_16035 PF13677 Membrane MotB of proton-channel complex MotA/MotB GII87_16035 PF00691 OmpA family GII87_16040 PF01618 MotA/TolQ/ExbB proton channel family GII87_16045 PF00356 Bacterial regulatory proteins, lacI family GII87_16050 PF00793 DAHP synthetase I family GII87_16050 PF01817 Chorismate mutase type II GII87_16055 PF11009 Protein of unknown function (DUF2847) GII87_16060 PF12732 YtxH-like protein GII87_16065 PF06103 Bacterial protein of unknown function (DUF948) GII87_16070 PF02875 Mur ligase family, glutamate ligase domain GII87_16070 PF01225 Mur ligase family, catalytic domain GII87_16070 PF08245 Mur ligase middle domain GII87_16075 PF01580 FtsK/SpoIIIE family GII87_16075 PF17854 FtsK alpha domain GII87_16075 PF09397 Ftsk gamma domain GII87_16080 PF01588 Putative tRNA binding domain GII87_16080 PF14794 Domain of unknown function (DUF4479) GII87_16085 PF07285 Protein of unknown function (DUF1444) GII87_16090 PF00085 Thioredoxin GII87_16100 PF11071 Nucleoside 2-deoxyribosyltransferase YtoQ GII87_16105 PF05343 M42 glutamyl aminopeptidase GII87_16110 PF03413 Peptidase propeptide and YPEB domain GII87_16115 PF03949 Malic enzyme, NAD binding domain GII87_16115 PF00390 Malic enzyme, N-terminal domain GII87_16120 PF00753 Metallo-beta-lactamase superfamily GII87_16125 PF02390 Putative methyltransferase GII87_16130 PF14165 YtzH-like protein GII87_16135 PF01636 Phosphotransferase enzyme family GII87_16140 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) GII87_16140 PF17999 Pullulanase N1-terminal domain GII87_16140 PF00128 Alpha amylase, catalytic domain GII87_16145 PF00781 Diacylglycerol kinase catalytic domain GII87_16160 PF00291 Pyridoxal-phosphate dependent enzyme GII87_16165 PF01546 Peptidase family M20/M25/M40 GII87_16170 PF00860 Permease family GII87_16175 PF05975 Bacterial ABC transporter protein EcsB GII87_16180 PF00005 ABC transporter GII87_16185 PF08220 DeoR-like helix-turn-helix domain GII87_16190 PF00849 RNA pseudouridylate synthase GII87_16190 PF01479 S4 domain GII87_16195 PF14667 Polysaccharide biosynthesis C-terminal domain GII87_16195 PF01943 Polysaccharide biosynthesis protein GII87_16205 PF02028 BCCT, betaine/carnitine/choline family transporter GII87_16210 PF10957 Sporulation protein Cse60 GII87_16215 PF04854 Protein of unknown function, DUF624 GII87_16220 PF01408 Oxidoreductase family, NAD-binding Rossmann fold GII87_16220 PF02894 Oxidoreductase family, C-terminal alpha/beta domain GII87_16230 PF07470 Glycosyl Hydrolase Family 88 GII87_16235 PF00528 Binding-protein-dependent transport system inner membrane component GII87_16240 PF12833 Helix-turn-helix domain GII87_16240 PF17853 GGDEF-like domain GII87_16245 PF13416 Bacterial extracellular solute-binding protein GII87_16250 PF00528 Binding-protein-dependent transport system inner membrane component GII87_16255 PF01370 NAD dependent epimerase/dehydratase family GII87_16260 PF00067 Cytochrome P450 GII87_16265 PF06968 Biotin and Thiamin Synthesis associated domain GII87_16265 PF04055 Radical SAM superfamily GII87_16275 PF00155 Aminotransferase class I and II GII87_16280 PF00202 Aminotransferase class-III GII87_16285 PF03744 6-carboxyhexanoate--CoA ligase GII87_16290 PF01738 Dienelactone hydrolase family GII87_16315 PF02056 Family 4 glycosyl hydrolase GII87_16315 PF11975 Family 4 glycosyl hydrolase C-terminal domain GII87_16320 PF00581 Rhodanese-like domain GII87_16325 PF00133 tRNA synthetases class I (I, L, M and V) GII87_16325 PF09334 tRNA synthetases class I (M) GII87_16325 PF08264 Anticodon-binding domain of tRNA GII87_16325 PF13603 Leucyl-tRNA synthetase, Domain 2 GII87_16330 PF14074 Protein of unknown function (DUF4257) GII87_16335 PF01740 STAS domain GII87_16335 PF13426 PAS domain GII87_16340 PF07690 Major Facilitator Superfamily GII87_16345 PF04791 LMBR1-like membrane protein GII87_16350 PF02687 FtsX-like permease family GII87_16355 PF00005 ABC transporter GII87_16360 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GII87_16365 PF00072 Response regulator receiver domain GII87_16365 PF00486 Transcriptional regulatory protein, C terminal GII87_16370 PF12704 MacB-like periplasmic core domain GII87_16370 PF02687 FtsX-like permease family GII87_16375 PF00005 ABC transporter GII87_16390 PF00005 ABC transporter GII87_16395 PF00392 Bacterial regulatory proteins, gntR family GII87_16405 PF10732 Protein of unknown function (DUF2524) GII87_16410 PF04055 Radical SAM superfamily GII87_16410 PF16199 Radical_SAM C-terminal domain GII87_16415 PF06962 Putative rRNA methylase GII87_16420 PF10776 Protein of unknown function (DUF2600) GII87_16425 PF12146 Serine aminopeptidase, S33 GII87_16430 PF00132 Bacterial transferase hexapeptide (six repeats) GII87_16435 PF00324 Amino acid permease GII87_16440 PF13537 Glutamine amidotransferase domain GII87_16440 PF00733 Asparagine synthase GII87_16445 PF00438 S-adenosylmethionine synthetase, N-terminal domain GII87_16445 PF02773 S-adenosylmethionine synthetase, C-terminal domain GII87_16445 PF02772 S-adenosylmethionine synthetase, central domain GII87_16450 PF01293 Phosphoenolpyruvate carboxykinase GII87_16455 PF10763 Protein of unknown function (DUF2584) GII87_16460 PF00326 Prolyl oligopeptidase family GII87_16470 PF00005 ABC transporter GII87_16475 PF00528 Binding-protein-dependent transport system inner membrane component GII87_16480 PF00293 NUDIX domain GII87_16485 PF05105 Bacteriophage holin family GII87_16490 PF00210 Ferritin-like domain GII87_16500 PF13115 YtkA-like GII87_16505 PF02664 S-Ribosylhomocysteinase (LuxS) GII87_16510 PF01809 Putative membrane protein insertion efficiency factor GII87_16515 PF00484 Carbonic anhydrase GII87_16520 PF01197 Ribosomal protein L31 GII87_16525 PF01654 Cytochrome bd terminal oxidase subunit I GII87_16530 PF02322 Cytochrome bd terminal oxidase subunit II GII87_16535 PF07561 Domain of Unknown Function (DUF1540) GII87_16540 PF00950 ABC 3 transport family GII87_16545 PF00950 ABC 3 transport family GII87_16550 PF00005 ABC transporter GII87_16555 PF01297 Zinc-uptake complex component A periplasmic GII87_16560 PF13378 Enolase C-terminal domain-like GII87_16560 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain GII87_16565 PF13193 AMP-binding enzyme C-terminal domain GII87_16565 PF00501 AMP-binding enzyme GII87_16570 PF00378 Enoyl-CoA hydratase/isomerase GII87_16575 PF00561 alpha/beta hydrolase fold GII87_16580 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain GII87_16580 PF16582 Middle domain of thiamine pyrophosphate GII87_16580 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain GII87_16585 PF00425 chorismate binding enzyme GII87_16590 PF01258 Prokaryotic dksA/traR C4-type zinc finger GII87_16595 PF00483 Nucleotidyl transferase GII87_16600 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain GII87_16600 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain GII87_16600 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain GII87_16605 PF01370 NAD dependent epimerase/dehydratase family GII87_16610 PF00534 Glycosyl transferases group 1 GII87_16610 PF13439 Glycosyltransferase Family 4 GII87_16625 PF13439 Glycosyltransferase Family 4 GII87_16625 PF00534 Glycosyl transferases group 1 GII87_16630 PF01636 Phosphotransferase enzyme family GII87_16635 PF03073 TspO/MBR family GII87_16640 PF00343 Carbohydrate phosphorylase GII87_16645 PF00534 Glycosyl transferases group 1 GII87_16645 PF08323 Starch synthase catalytic domain GII87_16650 PF00483 Nucleotidyl transferase GII87_16655 PF00483 Nucleotidyl transferase GII87_16660 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) GII87_16660 PF02806 Alpha amylase, C-terminal all-beta domain GII87_16660 PF00128 Alpha amylase, catalytic domain GII87_16785 PF09515 Thiamine transporter protein (Thia_YuaJ) GII87_16790 PF00583 Acetyltransferase (GNAT) family GII87_16795 PF15975 Flotillin GII87_16795 PF01145 SPFH domain / Band 7 family GII87_16805 PF12867 DinB superfamily GII87_16815 PF00465 Iron-containing alcohol dehydrogenase GII87_16830 PF17735 Biofilm surface layer A GII87_16835 PF02254 TrkA-N domain GII87_16835 PF02080 TrkA-C domain GII87_16840 PF02386 Cation transport protein GII87_16845 PF05360 yiaA/B two helix domain GII87_16850 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase GII87_16850 PF13457 GW (Gly-Tryp) dipeptide domain GII87_16855 PF07690 Major Facilitator Superfamily GII87_16860 PF05995 Cysteine dioxygenase type I GII87_16870 PF02673 Bacitracin resistance protein BacA GII87_16875 PF01594 AI-2E family transporter GII87_16880 PF02894 Oxidoreductase family, C-terminal alpha/beta domain GII87_16880 PF01408 Oxidoreductase family, NAD-binding Rossmann fold GII87_16885 PF06134 L-rhamnose isomerase (RhaA) GII87_16890 PF05336 L-rhamnose mutarotase GII87_16895 PF00370 FGGY family of carbohydrate kinases, N-terminal domain GII87_16895 PF02782 FGGY family of carbohydrate kinases, C-terminal domain GII87_16900 PF00455 DeoR C terminal sensor domain GII87_16900 PF08220 DeoR-like helix-turn-helix domain GII87_16905 PF00596 Class II Aldolase and Adducin N-terminal domain GII87_16910 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GII87_16910 PF02743 Cache domain GII87_16910 PF00672 HAMP domain GII87_16915 PF02743 Cache domain GII87_16915 PF00672 HAMP domain GII87_16915 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GII87_16920 PF02743 Cache domain GII87_16920 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GII87_16920 PF00672 HAMP domain GII87_16925 PF02743 Cache domain GII87_16925 PF00672 HAMP domain GII87_16925 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GII87_16940 PF01894 Uncharacterised protein family UPF0047 GII87_16950 PF00128 Alpha amylase, catalytic domain GII87_16950 PF16657 Maltogenic Amylase, C-terminal domain GII87_16955 PF00571 CBS domain GII87_16955 PF01595 Cyclin M transmembrane N-terminal domain GII87_16955 PF03471 Transporter associated domain GII87_16960 PF04298 Putative neutral zinc metallopeptidase GII87_16970 PF11458 Membrane-integrating protein Mistic GII87_16975 PF07885 Ion channel GII87_16975 PF02254 TrkA-N domain GII87_16980 PF08868 YugN-like family GII87_16990 PF00342 Phosphoglucose isomerase GII87_16995 PF00465 Iron-containing alcohol dehydrogenase GII87_17000 PF00465 Iron-containing alcohol dehydrogenase GII87_17005 PF04070 Domain of unknown function (DUF378) GII87_17010 PF00575 S1 RNA binding domain GII87_17015 PF00155 Aminotransferase class I and II GII87_17020 PF01037 Lrp/AsnC ligand binding domain GII87_17025 PF00561 alpha/beta hydrolase fold GII87_17025 PF08386 TAP-like protein GII87_17030 PF08958 Domain of unknown function (DUF1871) GII87_17035 PF00155 Aminotransferase class I and II GII87_17040 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GII87_17040 PF00512 His Kinase A (phospho-acceptor) domain GII87_17045 PF08810 Kinase associated protein B GII87_17050 PF00929 Exonuclease GII87_17060 PF07690 Major Facilitator Superfamily GII87_17065 PF00912 Transglycosylase GII87_17065 PF00905 Penicillin binding protein transpeptidase domain GII87_17070 PF04134 Protein of unknown function, DUF393 GII87_17075 PF17328 Family of unknown function (DUF5366) GII87_17080 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GII87_17080 PF00989 PAS fold GII87_17080 PF17203 Single cache domain 3 GII87_17080 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain GII87_17085 PF00072 Response regulator receiver domain GII87_17110 PF03390 2-hydroxycarboxylate transporter family GII87_17120 PF13244 Domain of unknown function (DUF4040) GII87_17120 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus GII87_17120 PF00361 Proton-conducting membrane transporter GII87_17125 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter GII87_17130 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L GII87_17135 PF00361 Proton-conducting membrane transporter GII87_17140 PF01899 Na+/H+ ion antiporter subunit GII87_17145 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) GII87_17150 PF03334 Na+/H+ antiporter subunit GII87_17155 PF03061 Thioesterase superfamily GII87_17160 PF00072 Response regulator receiver domain GII87_17160 PF00196 Bacterial regulatory proteins, luxR family GII87_17165 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GII87_17165 PF07730 Histidine kinase GII87_17175 PF00348 Polyprenyl synthetase GII87_17180 PF08181 DegQ (SacQ) family GII87_17195 PF00563 EAL domain GII87_17195 PF08668 HDOD domain GII87_17200 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family GII87_17200 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain GII87_17200 PF17956 Nicotinate phosphoribosyltransferase C-terminal domain GII87_17205 PF00857 Isochorismatase family GII87_17210 PF07997 Protein of unknown function (DUF1694) GII87_17215 PF14166 YueH-like protein GII87_17220 PF10676 Spore germination protein gerPA/gerPF GII87_17225 PF01594 AI-2E family transporter GII87_17230 PF10049 Protein of unknown function (DUF2283) GII87_17235 PF10842 Protein of unknown function (DUF2642) GII87_17240 PF01966 HD domain GII87_17245 PF00106 short chain dehydrogenase GII87_17250 PF17355 Family of unknown function (DUF5383) GII87_17260 PF12538 DNA transporter GII87_17260 PF01580 FtsK/SpoIIIE family GII87_17265 PF10140 WXG100 protein secretion system (Wss), protein YukC GII87_17270 PF08817 WXG100 protein secretion system (Wss), protein YukD GII87_17275 PF06013 Proteins of 100 residues with WXG GII87_17280 PF13556 PucR C-terminal helix-turn-helix domain GII87_17280 PF06018 CodY GAF-like domain GII87_17280 PF17853 GGDEF-like domain GII87_17285 PF05222 Alanine dehydrogenase/PNT, N-terminal domain GII87_17285 PF01262 Alanine dehydrogenase/PNT, C-terminal domain GII87_17290 PF10042 Uncharacterized conserved protein (DUF2278) GII87_17295 PF03621 MbtH-like protein GII87_17300 PF00550 Phosphopantetheine attachment site GII87_17300 PF00975 Thioesterase domain GII87_17300 PF13193 AMP-binding enzyme C-terminal domain GII87_17300 PF00501 AMP-binding enzyme GII87_17300 PF00668 Condensation domain GII87_17305 PF00550 Phosphopantetheine attachment site GII87_17305 PF00857 Isochorismatase family GII87_17310 PF00501 AMP-binding enzyme GII87_17310 PF13193 AMP-binding enzyme C-terminal domain GII87_17315 PF00425 chorismate binding enzyme GII87_17320 PF00106 short chain dehydrogenase GII87_17325 PF00756 Putative esterase GII87_17330 PF00174 Oxidoreductase molybdopterin binding domain GII87_17335 PF02632 BioY family GII87_17340 PF13726 Na+-H+ antiporter family GII87_17340 PF03553 Na+/H+ antiporter family GII87_17345 PF00883 Cytosol aminopeptidase family, catalytic domain GII87_17345 PF02789 Cytosol aminopeptidase family, N-terminal domain GII87_17350 PF02681 Divergent PAP2 family GII87_17355 PF06725 3D domain GII87_17360 PF14068 Putative membrane protein GII87_17365 PF17302 Family of unknown function (DUF5351) GII87_17370 PF07992 Pyridine nucleotide-disulphide oxidoreductase GII87_17375 PF07992 Pyridine nucleotide-disulphide oxidoreductase GII87_17385 PF00478 IMP dehydrogenase / GMP reductase domain GII87_17390 PF04299 Putative FMN-binding domain GII87_17395 PF00583 Acetyltransferase (GNAT) family GII87_17400 PF01521 Iron-sulphur cluster biosynthesis GII87_17405 PF01678 Diaminopimelate epimerase GII87_17410 PF07662 Na+ dependent nucleoside transporter C-terminus GII87_17410 PF01773 Na+ dependent nucleoside transporter N-terminus GII87_17415 PF07293 Protein of unknown function (DUF1450) GII87_17420 PF07992 Pyridine nucleotide-disulphide oxidoreductase GII87_17425 PF07315 Protein of unknown function (DUF1462) GII87_17430 PF01106 NifU-like domain GII87_17435 PF07676 WD40-like Beta Propeller Repeat GII87_17435 PF00326 Prolyl oligopeptidase family GII87_17440 PF08544 GHMP kinases C terminal GII87_17440 PF00288 GHMP kinases N terminal domain GII87_17445 PF00291 Pyridoxal-phosphate dependent enzyme GII87_17450 PF00742 Homoserine dehydrogenase GII87_17450 PF01842 ACT domain GII87_17450 PF03447 Homoserine dehydrogenase, NAD binding domain GII87_17460 PF04608 Phosphatidylglycerophosphatase A GII87_17465 PF13344 Haloacid dehalogenase-like hydrolase GII87_17470 PF01934 Protein of unknown function DUF86 GII87_17475 PF06265 Protein of unknown function (DUF1027) GII87_17480 PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) GII87_17485 PF04055 Radical SAM superfamily GII87_17485 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family GII87_17490 PF01551 Peptidase family M23 GII87_17495 PF09560 Sporulation protein YunB (Spo_YunB) GII87_17500 PF08827 Domain of unknown function (DUF1805) GII87_17505 PF02872 5'-nucleotidase, C-terminal domain GII87_17510 PF01925 Sulfite exporter TauE/SafE GII87_17515 PF01904 Protein of unknown function DUF72 GII87_17525 PF01979 Amidohydrolase family GII87_17530 PF17853 GGDEF-like domain GII87_17530 PF13556 PucR C-terminal helix-turn-helix domain GII87_17530 PF07905 Purine catabolism regulatory protein-like family GII87_17535 PF00860 Permease family GII87_17540 PF00860 Permease family GII87_17545 PF01014 Uricase GII87_17545 PF09349 OHCU decarboxylase GII87_17550 PF00576 HIUase/Transthyretin family GII87_17555 PF09680 Family of unknown function GII87_17560 PF01799 [2Fe-2S] binding domain GII87_17560 PF00111 2Fe-2S iron-sulfur cluster binding domain GII87_17565 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain GII87_17565 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase GII87_17570 PF00941 FAD binding domain in molybdopterin dehydrogenase GII87_17575 PF12804 MobA-like NTP transferase domain GII87_17580 PF02625 XdhC and CoxI family GII87_17580 PF13478 XdhC Rossmann domain GII87_17585 PF00266 Aminotransferase class-V GII87_17590 PF01546 Peptidase family M20/M25/M40 GII87_17600 PF04231 Endonuclease I GII87_17605 PF00005 ABC transporter GII87_17605 PF17912 MalK OB fold domain GII87_17605 PF03459 TOBE domain GII87_17610 PF07702 UTRA domain GII87_17610 PF00392 Bacterial regulatory proteins, gntR family GII87_17615 PF00294 pfkB family carbohydrate kinase GII87_17620 PF00528 Binding-protein-dependent transport system inner membrane component GII87_17625 PF00528 Binding-protein-dependent transport system inner membrane component GII87_17630 PF01547 Bacterial extracellular solute-binding protein GII87_17635 PF01380 SIS domain GII87_17640 PF01541 GIY-YIG catalytic domain GII87_17645 PF01266 FAD dependent oxidoreductase GII87_17660 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily GII87_17670 PF01458 Uncharacterized protein family (UPF0051) GII87_17675 PF01592 NifU-like N terminal domain GII87_17680 PF00266 Aminotransferase class-V GII87_17685 PF01458 Uncharacterized protein family (UPF0051) GII87_17690 PF00005 ABC transporter GII87_17700 PF02627 Carboxymuconolactone decarboxylase family GII87_17705 PF03180 NLPA lipoprotein GII87_17710 PF00528 Binding-protein-dependent transport system inner membrane component GII87_17715 PF00005 ABC transporter GII87_17715 PF09383 NIL domain GII87_17720 PF02036 SCP-2 sterol transfer family GII87_17725 PF00085 Thioredoxin GII87_17730 PF01751 Toprim domain GII87_17735 PF10830 Protein of unknown function (DUF2553) GII87_17740 PF01597 Glycine cleavage H-protein GII87_17745 PF03960 ArsC family GII87_17750 PF00441 Acyl-CoA dehydrogenase, C-terminal domain GII87_17750 PF02770 Acyl-CoA dehydrogenase, middle domain GII87_17750 PF02771 Acyl-CoA dehydrogenase, N-terminal domain GII87_17755 PF02803 Thiolase, C-terminal domain GII87_17755 PF00108 Thiolase, N-terminal domain GII87_17760 PF00378 Enoyl-CoA hydratase/isomerase GII87_17760 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain GII87_17760 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain GII87_17765 PF14115 YuzL-like protein GII87_17770 PF01619 Proline dehydrogenase GII87_17780 PF07875 Coat F domain GII87_17785 PF01047 MarR family GII87_17790 PF07690 Major Facilitator Superfamily GII87_17795 PF14552 Tautomerase enzyme GII87_17805 PF03466 LysR substrate binding domain GII87_17805 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GII87_17810 PF10835 Protein of unknown function (DUF2573) GII87_17815 PF00005 ABC transporter GII87_17820 PF14039 YusW-like protein GII87_17830 PF00106 short chain dehydrogenase GII87_17835 PF00210 Ferritin-like domain GII87_17840 PF13180 PDZ domain GII87_17845 PF00486 Transcriptional regulatory protein, C terminal GII87_17845 PF00072 Response regulator receiver domain GII87_17850 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GII87_17850 PF00672 HAMP domain GII87_17850 PF00512 His Kinase A (phospho-acceptor) domain GII87_17860 PF00440 Bacterial regulatory proteins, tetR family GII87_17865 PF00206 Lyase GII87_17865 PF10415 Fumarase C C-terminus GII87_17870 PF13113 Protein of unknown function (DUF3970) GII87_17875 PF03323 Bacillus/Clostridium GerA spore germination protein GII87_17880 PF03845 Spore germination protein GII87_17885 PF05504 Spore germination B3/ GerAC like, C-terminal GII87_17890 PF00072 Response regulator receiver domain GII87_17890 PF00196 Bacterial regulatory proteins, luxR family GII87_17895 PF00672 HAMP domain GII87_17895 PF07730 Histidine kinase GII87_17895 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GII87_17900 PF09922 Cell wall-active antibiotics response 4TMS YvqF GII87_17905 PF13349 Putative adhesin GII87_17910 PF04012 PspA/IM30 family GII87_17920 PF07690 Major Facilitator Superfamily GII87_17925 PF01923 Cobalamin adenosyltransferase GII87_17930 PF00005 ABC transporter GII87_17935 PF01032 FecCD transport family GII87_17940 PF01497 Periplasmic binding protein GII87_17945 PF00106 short chain dehydrogenase GII87_17950 PF08450 SMP-30/Gluconolactonase/LRE-like region GII87_17955 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GII87_17955 PF00512 His Kinase A (phospho-acceptor) domain GII87_17960 PF00072 Response regulator receiver domain GII87_17960 PF00486 Transcriptional regulatory protein, C terminal GII87_17970 PF04545 Sigma-70, region 4 GII87_17975 PF12841 YvrJ protein family GII87_17980 PF00190 Cupin GII87_17985 PF14184 Regulatory protein YrvL GII87_17990 PF02687 FtsX-like permease family GII87_17990 PF12704 MacB-like periplasmic core domain GII87_17995 PF00005 ABC transporter GII87_18000 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion GII87_18005 PF00005 ABC transporter GII87_18010 PF01032 FecCD transport family GII87_18015 PF01032 FecCD transport family GII87_18020 PF01497 Periplasmic binding protein GII87_18025 PF13520 Amino acid permease GII87_18030 PF09575 Small spore protein J (Spore_SspJ) GII87_18035 PF04307 LexA-binding, inner membrane-associated putative hydrolase GII87_18040 PF00884 Sulfatase GII87_18045 PF12727 PBP superfamily domain GII87_18045 PF12728 Helix-turn-helix domain GII87_18055 PF00528 Binding-protein-dependent transport system inner membrane component GII87_18060 PF00248 Aldo/keto reductase family GII87_18070 PF00999 Sodium/hydrogen exchanger family GII87_18075 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain GII87_18075 PF01077 Nitrite and sulphite reductase 4Fe-4S domain GII87_18080 PF00258 Flavodoxin GII87_18080 PF00667 FAD binding domain GII87_18080 PF00175 Oxidoreductase NAD-binding domain GII87_18085 PF13538 UvrD-like helicase C-terminal domain GII87_18090 PF03458 UPF0126 domain GII87_18095 PF02600 Disulfide bond formation protein DsbB GII87_18100 PF13462 Thioredoxin GII87_18105 PF00403 Heavy-metal-associated domain GII87_18110 PF00403 Heavy-metal-associated domain GII87_18115 PF00403 Heavy-metal-associated domain GII87_18120 PF02583 Metal-sensitive transcriptional repressor GII87_18125 PF02894 Oxidoreductase family, C-terminal alpha/beta domain GII87_18125 PF01408 Oxidoreductase family, NAD-binding Rossmann fold GII87_18130 PF02525 Flavodoxin-like fold GII87_18140 PF17314 Family of unknown function (DUF5360) GII87_18145 PF00893 Small Multidrug Resistance protein GII87_18150 PF00440 Bacterial regulatory proteins, tetR family GII87_18155 PF00106 short chain dehydrogenase GII87_18165 PF01668 SmpB protein GII87_18170 PF17876 Cold shock domain GII87_18170 PF00773 RNB domain GII87_18170 PF08206 Ribonuclease B OB domain GII87_18170 PF00575 S1 RNA binding domain GII87_18175 PF12146 Serine aminopeptidase, S33 GII87_18180 PF03840 Preprotein translocase SecG subunit GII87_18185 PF00561 alpha/beta hydrolase fold GII87_18190 PF01381 Helix-turn-helix GII87_18205 PF01638 HxlR-like helix-turn-helix GII87_18210 PF00672 HAMP domain GII87_18210 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GII87_18210 PF12729 Four helix bundle sensory module for signal transduction GII87_18215 PF00528 Binding-protein-dependent transport system inner membrane component GII87_18220 PF04069 Substrate binding domain of ABC-type glycine betaine transport system GII87_18225 PF00528 Binding-protein-dependent transport system inner membrane component GII87_18230 PF00571 CBS domain GII87_18230 PF00005 ABC transporter GII87_18235 PF12802 MarR family GII87_18240 PF17418 Sporulation delaying protein SdpA GII87_18245 PF05090 Vitamin K-dependent gamma-carboxylase GII87_18255 PF13630 SdpI/YhfL protein family GII87_18255 PF07853 Protein of unknown function (DUF1648) GII87_18260 PF01022 Bacterial regulatory protein, arsR family GII87_18265 PF00528 Binding-protein-dependent transport system inner membrane component GII87_18270 PF04069 Substrate binding domain of ABC-type glycine betaine transport system GII87_18275 PF00528 Binding-protein-dependent transport system inner membrane component GII87_18280 PF00571 CBS domain GII87_18280 PF00005 ABC transporter GII87_18285 PF12802 MarR family GII87_18290 PF01914 MarC family integral membrane protein GII87_18295 PF08000 Bacterial PH domain GII87_18295 PF11724 YvbH-like oligomerisation region GII87_18305 PF13240 zinc-ribbon domain GII87_18310 PF00583 Acetyltransferase (GNAT) family GII87_18315 PF03952 Enolase, N-terminal domain GII87_18315 PF00113 Enolase, C-terminal TIM barrel domain GII87_18320 PF06415 BPG-independent PGAM N-terminus (iPGM_N) GII87_18320 PF01676 Metalloenzyme superfamily GII87_18325 PF00121 Triosephosphate isomerase GII87_18330 PF00162 Phosphoglycerate kinase GII87_18335 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain GII87_18335 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain GII87_18340 PF04198 Putative sugar-binding domain GII87_18345 PF00083 Sugar (and other) transporter GII87_18350 PF00392 Bacterial regulatory proteins, gntR family GII87_18355 PF00296 Luciferase-like monooxygenase GII87_18360 PF03466 LysR substrate binding domain GII87_18360 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GII87_18365 PF00892 EamA-like transporter family GII87_18370 PF00324 Amino acid permease GII87_18375 PF00704 Glycosyl hydrolases family 18 GII87_18380 PF02589 LUD domain GII87_18385 PF02589 LUD domain GII87_18385 PF13183 4Fe-4S dicluster domain GII87_18385 PF11870 Domain of unknown function (DUF3390) GII87_18390 PF02754 Cysteine-rich domain GII87_18395 PF00072 Response regulator receiver domain GII87_18395 PF00196 Bacterial regulatory proteins, luxR family GII87_18400 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GII87_18400 PF07730 Histidine kinase GII87_18410 PF00005 ABC transporter GII87_18415 PF12697 Alpha/beta hydrolase family GII87_18420 PF13426 PAS domain GII87_18420 PF07228 Stage II sporulation protein E (SpoIIE) GII87_18425 PF07745 Glycosyl hydrolase family 53 GII87_18430 PF08532 Beta-galactosidase trimerisation domain GII87_18430 PF08533 Beta-galactosidase C-terminal domain GII87_18430 PF02449 Beta-galactosidase GII87_18435 PF00528 Binding-protein-dependent transport system inner membrane component GII87_18440 PF00528 Binding-protein-dependent transport system inner membrane component GII87_18445 PF13416 Bacterial extracellular solute-binding protein GII87_18450 PF00356 Bacterial regulatory proteins, lacI family GII87_18455 PF07729 FCD domain GII87_18455 PF00392 Bacterial regulatory proteins, gntR family GII87_18460 PF02652 L-lactate permease GII87_18465 PF04552 Sigma-54, DNA binding domain GII87_18465 PF00309 Sigma-54 factor, Activator interacting domain (AID) GII87_18465 PF04963 Sigma-54 factor, core binding domain GII87_18470 PF09628 YvfG protein GII87_18475 PF04230 Polysaccharide pyruvyl transferase GII87_18480 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family GII87_18485 PF00132 Bacterial transferase hexapeptide (six repeats) GII87_18485 PF17836 PglD N-terminal domain GII87_18490 PF02397 Bacterial sugar transferase GII87_18495 PF14667 Polysaccharide biosynthesis C-terminal domain GII87_18495 PF01943 Polysaccharide biosynthesis protein GII87_18500 PF00535 Glycosyl transferase family 2 GII87_18505 PF04230 Polysaccharide pyruvyl transferase GII87_18510 PF00535 Glycosyl transferase family 2 GII87_18520 PF00534 Glycosyl transferases group 1 GII87_18520 PF13439 Glycosyltransferase Family 4 GII87_18525 PF00535 Glycosyl transferase family 2 GII87_18530 PF13439 Glycosyltransferase Family 4 GII87_18530 PF00534 Glycosyl transferases group 1 GII87_18535 PF02719 Polysaccharide biosynthesis protein GII87_18540 PF13614 AAA domain GII87_18545 PF02706 Chain length determinant protein GII87_18550 PF08671 Anti-repressor SinI GII87_18550 PF01381 Helix-turn-helix GII87_18555 PF00135 Carboxylesterase family GII87_18565 PF05870 Phenolic acid decarboxylase (PAD) GII87_18575 PF01177 Asp/Glu/Hydantoin racemase GII87_18580 PF00144 Beta-lactamase GII87_18580 PF11954 Domain of unknown function (DUF3471) GII87_18585 PF02435 Levansucrase/Invertase GII87_18590 PF00251 Glycosyl hydrolases family 32 N-terminal domain GII87_18590 PF08244 Glycosyl hydrolases family 32 C terminal GII87_18595 PF13520 Amino acid permease GII87_18600 PF17934 Tetracyclin repressor-like, C-terminal domain GII87_18600 PF00440 Bacterial regulatory proteins, tetR family GII87_18605 PF00893 Small Multidrug Resistance protein GII87_18610 PF00893 Small Multidrug Resistance protein GII87_18615 PF11553 Protein of unknown function (DUF3231) GII87_18620 PF01565 FAD binding domain GII87_18620 PF08031 Berberine and berberine like GII87_18625 PF01734 Patatin-like phospholipase GII87_18635 PF00574 Clp protease GII87_18640 PF13419 Haloacid dehalogenase-like hydrolase GII87_18645 PF00128 Alpha amylase, catalytic domain GII87_18645 PF16657 Maltogenic Amylase, C-terminal domain GII87_18650 PF03632 Glycosyl hydrolase family 65 central catalytic domain GII87_18650 PF03636 Glycosyl hydrolase family 65, N-terminal domain GII87_18650 PF03633 Glycosyl hydrolase family 65, C-terminal domain GII87_18655 PF06691 Protein of unknown function (DUF1189) GII87_18660 PF00528 Binding-protein-dependent transport system inner membrane component GII87_18665 PF00528 Binding-protein-dependent transport system inner membrane component GII87_18670 PF13416 Bacterial extracellular solute-binding protein GII87_18675 PF00128 Alpha amylase, catalytic domain GII87_18675 PF02903 Alpha amylase, N-terminal ig-like domain GII87_18680 PF00356 Bacterial regulatory proteins, lacI family GII87_18685 PF03641 Possible lysine decarboxylase GII87_18690 PF03819 MazG nucleotide pyrophosphohydrolase domain GII87_18695 PF00916 Sulfate permease family GII87_18695 PF01740 STAS domain GII87_18700 PF00484 Carbonic anhydrase GII87_18705 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain GII87_18705 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GII87_18710 PF02687 FtsX-like permease family GII87_18715 PF00005 ABC transporter GII87_18720 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GII87_18725 PF00486 Transcriptional regulatory protein, C terminal GII87_18725 PF00072 Response regulator receiver domain GII87_18735 PF00797 N-acetyltransferase GII87_18740 PF00381 PTS HPr component phosphorylation site GII87_18745 PF10298 WhiA N-terminal LAGLIDADG-like domain GII87_18745 PF02650 WhiA C-terminal HTH domain GII87_18745 PF14527 WhiA LAGLIDADG-like domain GII87_18750 PF01933 Uncharacterised protein family UPF0052 GII87_18755 PF03668 P-loop ATPase protein family GII87_18760 PF00293 NUDIX domain GII87_18765 PF07992 Pyridine nucleotide-disulphide oxidoreductase GII87_18770 PF00877 NlpC/P60 family GII87_18780 PF00005 ABC transporter GII87_18780 PF00664 ABC transporter transmembrane region GII87_18800 PF01502 Phosphoribosyl-AMP cyclohydrolase GII87_18800 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase GII87_18805 PF00977 Histidine biosynthesis protein GII87_18810 PF00977 Histidine biosynthesis protein GII87_18815 PF00117 Glutamine amidotransferase class-I GII87_18820 PF00475 Imidazoleglycerol-phosphate dehydratase GII87_18825 PF00815 Histidinol dehydrogenase GII87_18830 PF01634 ATP phosphoribosyltransferase GII87_18835 PF13393 Histidyl-tRNA synthetase GII87_18840 PF13529 Peptidase_C39 like family GII87_18845 PF03211 Pectate lyase GII87_18850 PF14602 Hexapeptide repeat of succinyl-transferase GII87_18855 PF13419 Haloacid dehalogenase-like hydrolase GII87_18860 PF07670 Nucleoside recognition GII87_18865 PF01790 Prolipoprotein diacylglyceryl transferase GII87_18870 PF02603 HPr Serine kinase N terminus GII87_18870 PF07475 HPr Serine kinase C-terminal domain GII87_18875 PF01979 Amidohydrolase family GII87_18880 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase GII87_18890 PF00149 Calcineurin-like phosphoesterase GII87_18895 PF01047 MarR family GII87_18900 PF00067 Cytochrome P450 GII87_18905 PF16715 Cyclodipeptide synthase GII87_18910 PF01047 MarR family GII87_18915 PF07690 Major Facilitator Superfamily GII87_18920 PF04020 Mycobacterial 4 TMS phage holin, superfamily IV GII87_18925 PF04024 PspC domain GII87_18930 PF13349 Putative adhesin GII87_18950 PF17760 UvrA interaction domain GII87_18950 PF17755 UvrA DNA-binding domain GII87_18950 PF00005 ABC transporter GII87_18955 PF17757 UvrB interaction domain GII87_18955 PF12344 Ultra-violet resistance protein B GII87_18955 PF00271 Helicase conserved C-terminal domain GII87_18955 PF04851 Type III restriction enzyme, res subunit GII87_18955 PF02151 UvrB/uvrC motif GII87_18960 PF09964 Uncharacterized protein conserved in bacteria (DUF2198) GII87_18965 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain GII87_18965 PF00391 PEP-utilising enzyme, mobile domain GII87_18970 PF00440 Bacterial regulatory proteins, tetR family GII87_18975 PF07690 Major Facilitator Superfamily GII87_18980 PF17820 PDZ domain GII87_18985 PF17423 Swarming motility protein GII87_18990 PF01471 Putative peptidoglycan binding domain GII87_18990 PF03572 Peptidase family S41 GII87_18990 PF17820 PDZ domain GII87_18995 PF18075 FtsX extracellular domain GII87_18995 PF02687 FtsX-like permease family GII87_19000 PF00005 ABC transporter GII87_19005 PF13442 Cytochrome C oxidase, cbb3-type, subunit III GII87_19010 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 GII87_19010 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) GII87_19020 PF01043 SecA preprotein cross-linking domain GII87_19020 PF07516 SecA Wing and Scaffold domain GII87_19020 PF07517 SecA DEAD-like domain GII87_19020 PF02810 SEC-C motif GII87_19025 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein GII87_19025 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus GII87_19040 PF02561 Flagellar protein FliS GII87_19045 PF02465 Flagellar hook-associated protein 2 N-terminus GII87_19045 PF07195 Flagellar hook-associated protein 2 C-terminus GII87_19045 PF07196 Flagellin hook IN motif GII87_19050 PF03646 FlaG protein GII87_19055 PF00669 Bacterial flagellin N-terminal helical region GII87_19055 PF00700 Bacterial flagellin C-terminal helical region GII87_19060 PF02599 Global regulator protein family GII87_19065 PF02623 FliW protein GII87_19075 PF00669 Bacterial flagellin N-terminal helical region GII87_19075 PF00700 Bacterial flagellin C-terminal helical region GII87_19080 PF06429 Flagellar basal body rod FlgEFG protein C-terminal GII87_19080 PF00460 Flagella basal body rod protein GII87_19085 PF05130 FlgN protein GII87_19090 PF04316 Anti-sigma-28 factor, FlgM GII87_19105 PF10719 Late competence development protein ComFB GII87_19110 PF00271 Helicase conserved C-terminal domain GII87_19110 PF04851 Type III restriction enzyme, res subunit GII87_19115 PF02645 Uncharacterised protein, DegV family COG1307 GII87_19120 PF00196 Bacterial regulatory proteins, luxR family GII87_19120 PF00072 Response regulator receiver domain GII87_19125 PF07730 Histidine kinase GII87_19125 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GII87_19125 PF05384 Sensor protein DegS GII87_19130 PF01205 Uncharacterized protein family UPF0029 GII87_19130 PF09186 Domain of unknown function (DUF1949) GII87_19135 PF03816 Cell envelope-related transcriptional attenuator domain GII87_19140 PF00953 Glycosyl transferase family 4 GII87_19150 PF00535 Glycosyl transferase family 2 GII87_19155 PF02706 Chain length determinant protein GII87_19160 PF04932 O-Antigen ligase GII87_19165 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain GII87_19165 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain GII87_19165 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain GII87_19170 PF13439 Glycosyltransferase Family 4 GII87_19170 PF00534 Glycosyl transferases group 1 GII87_19175 PF01943 Polysaccharide biosynthesis protein GII87_19175 PF14667 Polysaccharide biosynthesis C-terminal domain GII87_19180 PF02397 Bacterial sugar transferase GII87_19185 PF01520 N-acetylmuramoyl-L-alanine amidase GII87_19185 PF04122 Putative cell wall binding repeat 2 GII87_19190 PF04122 Putative cell wall binding repeat 2 GII87_19190 PF08486 Stage II sporulation protein GII87_19200 PF03816 Cell envelope-related transcriptional attenuator domain GII87_19205 PF02350 UDP-N-acetylglucosamine 2-epimerase GII87_19210 PF00483 Nucleotidyl transferase GII87_19220 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase GII87_19220 PF00535 Glycosyl transferase family 2 GII87_19225 PF00535 Glycosyl transferase family 2 GII87_19235 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase GII87_19245 PF00483 Nucleotidyl transferase GII87_19250 PF00005 ABC transporter GII87_19255 PF01061 ABC-2 type transporter GII87_19260 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase GII87_19265 PF09318 Glycosyl transferase 1 domain A GII87_19265 PF00534 Glycosyl transferases group 1 GII87_19270 PF01467 Cytidylyltransferase-like GII87_19275 PF03808 Glycosyl transferase WecB/TagA/CpsF family GII87_19280 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase GII87_19290 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase GII87_19290 PF08239 Bacterial SH3 domain GII87_19290 PF05036 Sporulation related domain GII87_19295 PF01238 Phosphomannose isomerase type I GII87_19300 PF03323 Bacillus/Clostridium GerA spore germination protein GII87_19305 PF03845 Spore germination protein GII87_19310 PF05504 Spore germination B3/ GerAC like, C-terminal GII87_19315 PF00083 Sugar (and other) transporter GII87_19320 PF03816 Cell envelope-related transcriptional attenuator domain GII87_19330 PF00877 NlpC/P60 family GII87_19340 PF09587 Bacterial capsule synthesis protein PGA_cap GII87_19345 PF14102 Capsule biosynthesis CapC GII87_19350 PF08245 Mur ligase middle domain GII87_19355 PF00356 Bacterial regulatory proteins, lacI family GII87_19360 PF00294 pfkB family carbohydrate kinase GII87_19365 PF05025 RbsD / FucU transport protein family GII87_19370 PF00005 ABC transporter GII87_19375 PF02653 Branched-chain amino acid transport system / permease component GII87_19380 PF13407 Periplasmic binding protein domain GII87_19385 PF08239 Bacterial SH3 domain GII87_19390 PF13031 Protein of unknown function (DUF3892) GII87_19395 PF02525 Flavodoxin-like fold GII87_19400 PF03306 Alpha-acetolactate decarboxylase GII87_19405 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain GII87_19405 PF00205 Thiamine pyrophosphate enzyme, central domain GII87_19405 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain GII87_19410 PF03466 LysR substrate binding domain GII87_19410 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GII87_19415 PF02040 Arsenical pump membrane protein GII87_19430 PF08757 CotH kinase protein GII87_19440 PF01613 Flavin reductase like domain GII87_19445 PF13789 Domain of unknown function (DUF4181) GII87_19455 PF13404 AsnC-type helix-turn-helix domain GII87_19455 PF01037 Lrp/AsnC ligand binding domain GII87_19460 PF02417 Chromate transporter GII87_19465 PF02417 Chromate transporter GII87_19475 PF03358 NADPH-dependent FMN reductase GII87_19480 PF03466 LysR substrate binding domain GII87_19480 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GII87_19485 PF04493 Endonuclease V GII87_19490 PF07661 MORN repeat variant GII87_19495 PF14449 Pre-toxin TG GII87_19495 PF04740 LXG domain of WXG superfamily GII87_19495 PF14431 YwqJ-like deaminase GII87_19505 PF16888 Domain of unknown function (DUF5082) GII87_19515 PF09234 Domain of unknown function (DUF1963) GII87_19520 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain GII87_19520 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain GII87_19520 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain GII87_19530 PF13614 AAA domain GII87_19535 PF02706 Chain length determinant protein GII87_19535 PF13807 G-rich domain on putative tyrosine kinase GII87_19545 PF04434 SWIM zinc finger GII87_19550 PF12419 SNF2 Helicase protein GII87_19550 PF00176 SNF2 family N-terminal domain GII87_19550 PF00271 Helicase conserved C-terminal domain GII87_19560 PF08220 DeoR-like helix-turn-helix domain GII87_19560 PF00455 DeoR C terminal sensor domain GII87_19565 PF00436 Single-strand binding protein family GII87_19575 PF14183 YwpF-like protein GII87_19580 PF04203 Sortase domain GII87_19590 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GII87_19590 PF06580 Histidine kinase GII87_19595 PF01741 Large-conductance mechanosensitive channel, MscL GII87_19600 PF07977 FabA-like domain GII87_19605 PF18801 response regulator aspartate phosphatase H, N terminal GII87_19610 PF00460 Flagella basal body rod protein GII87_19610 PF06429 Flagellar basal body rod FlgEFG protein C-terminal GII87_19615 PF06429 Flagellar basal body rod FlgEFG protein C-terminal GII87_19615 PF00460 Flagella basal body rod protein GII87_19625 PF12116 Stage III sporulation protein D GII87_19635 PF01047 MarR family GII87_19640 PF07690 Major Facilitator Superfamily GII87_19645 PF13229 Right handed beta helix region GII87_19650 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin GII87_19655 PF07690 Major Facilitator Superfamily GII87_19660 PF00857 Isochorismatase family GII87_19670 PF00909 Ammonium Transporter Family GII87_19675 PF00543 Nitrogen regulatory protein P-II GII87_19680 PF01569 PAP2 superfamily GII87_19685 PF04892 VanZ like family GII87_19690 PF01551 Peptidase family M23 GII87_19695 PF00583 Acetyltransferase (GNAT) family GII87_19700 PF17319 Family of unknown function (DUF5362) GII87_19710 PF17370 Family of unknown function (DUF5392) GII87_19715 PF13396 Phospholipase_D-nuclease N-terminal GII87_19715 PF13091 PLD-like domain GII87_19720 PF13411 MerR HTH family regulatory protein GII87_19720 PF07739 TipAS antibiotic-recognition domain GII87_19725 PF17319 Family of unknown function (DUF5362) GII87_19730 PF13460 NAD(P)H-binding GII87_19735 PF02082 Transcriptional regulator GII87_19740 PF00449 Urease alpha-subunit, N-terminal domain GII87_19740 PF01979 Amidohydrolase family GII87_19745 PF00699 Urease beta subunit GII87_19750 PF00547 Urease, gamma subunit GII87_19765 PF05532 CsbD-like GII87_19775 PF18801 response regulator aspartate phosphatase H, N terminal GII87_19775 PF17874 MalT-like TPR region GII87_19780 PF06463 Molybdenum Cofactor Synthesis C GII87_19780 PF04055 Radical SAM superfamily GII87_19785 PF02634 FdhD/NarQ family GII87_19795 PF00092 von Willebrand factor type A domain GII87_19805 PF00092 von Willebrand factor type A domain GII87_19810 PF08486 Stage II sporulation protein GII87_19815 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) GII87_19820 PF08680 TATA-box binding GII87_19825 PF06612 Protein of unknown function (DUF1146) GII87_19835 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain GII87_19835 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain GII87_19840 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain GII87_19840 PF02874 ATP synthase alpha/beta family, beta-barrel domain GII87_19845 PF00231 ATP synthase GII87_19850 PF00306 ATP synthase alpha/beta chain, C terminal domain GII87_19850 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain GII87_19850 PF02874 ATP synthase alpha/beta family, beta-barrel domain GII87_19855 PF00213 ATP synthase delta (OSCP) subunit GII87_19860 PF00430 ATP synthase B/B' CF(0) GII87_19865 PF00137 ATP synthase subunit C GII87_19870 PF00119 ATP synthase A chain GII87_19875 PF03899 ATP synthase I chain GII87_19885 PF00464 Serine hydroxymethyltransferase GII87_19890 PF04260 Protein of unknown function (DUF436) GII87_19895 PF02502 Ribose/Galactose Isomerase GII87_19900 PF01451 Low molecular weight phosphotyrosine protein phosphatase GII87_19905 PF02659 Putative manganese efflux pump GII87_19910 PF03481 Putative GTP-binding controlling metal-binding GII87_19910 PF01300 Telomere recombination GII87_19920 PF09551 Stage II sporulation protein R (spore_II_R) GII87_19925 PF17094 Uncharacterised protein family (UPF0715) GII87_19930 PF17247 Family of unknown function (DUF5316) GII87_19935 PF17827 PrmC N-terminal domain GII87_19935 PF05175 Methyltransferase small domain GII87_19940 PF00472 RF-1 domain GII87_19940 PF03462 PCRF domain GII87_19945 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily GII87_19950 PF13411 MerR HTH family regulatory protein GII87_19955 PF03547 Membrane transport protein GII87_19960 PF03949 Malic enzyme, NAD binding domain GII87_19960 PF00390 Malic enzyme, N-terminal domain GII87_19965 PF00265 Thymidine kinase GII87_19970 PF01197 Ribosomal protein L31 GII87_19975 PF07497 Rho termination factor, RNA-binding domain GII87_19975 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain GII87_19975 PF07498 Rho termination factor, N-terminal domain GII87_19985 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded GII87_19990 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) GII87_19995 PF00923 Transaldolase/Fructose-6-phosphate aldolase GII87_20000 PF01116 Fructose-bisphosphate aldolase class-II GII87_20005 PF00072 Response regulator receiver domain GII87_20010 PF10740 Domain of unknown function (DUF2529) GII87_20015 PF00117 Glutamine amidotransferase class-I GII87_20015 PF06418 CTP synthase N-terminus GII87_20020 PF05066 HB1, ASXL, restriction endonuclease HTH domain GII87_20025 PF02771 Acyl-CoA dehydrogenase, N-terminal domain GII87_20025 PF02770 Acyl-CoA dehydrogenase, middle domain GII87_20025 PF00441 Acyl-CoA dehydrogenase, C-terminal domain GII87_20030 PF13183 4Fe-4S dicluster domain GII87_20030 PF02754 Cysteine-rich domain GII87_20035 PF13091 PLD-like domain GII87_20040 PF03851 UV-endonuclease UvdE GII87_20050 PF01872 RibD C-terminal domain GII87_20055 PF00664 ABC transporter transmembrane region GII87_20055 PF00005 ABC transporter GII87_20060 PF13396 Phospholipase_D-nuclease N-terminal GII87_20060 PF13091 PLD-like domain GII87_20070 PF02665 Nitrate reductase gamma subunit GII87_20075 PF02613 Nitrate reductase delta subunit GII87_20080 PF14711 Respiratory nitrate reductase beta C-terminal GII87_20080 PF13247 4Fe-4S dicluster domain GII87_20085 PF14710 Respiratory nitrate reductase alpha N-terminal GII87_20085 PF01568 Molydopterin dinucleotide binding domain GII87_20085 PF00384 Molybdopterin oxidoreductase GII87_20095 PF14256 YwiC-like protein GII87_20100 PF00027 Cyclic nucleotide-binding domain GII87_20100 PF00325 Bacterial regulatory proteins, crp family GII87_20105 PF07690 Major Facilitator Superfamily GII87_20110 PF00750 tRNA synthetases class I (R) GII87_20110 PF03485 Arginyl tRNA synthetase N terminal domain GII87_20110 PF05746 DALR anticodon binding domain GII87_20115 PF09148 Domain of unknown function (DUF1934) GII87_20120 PF11420 Bacteriocin subtilosin A GII87_20130 PF13186 Iron-sulfur cluster-binding domain GII87_20130 PF05402 Coenzyme PQQ synthesis protein D (PqqD) GII87_20130 PF04055 Radical SAM superfamily GII87_20140 PF00005 ABC transporter GII87_20150 PF05193 Peptidase M16 inactive domain GII87_20155 PF00675 Insulinase (Peptidase family M16) GII87_20180 PF18801 response regulator aspartate phosphatase H, N terminal GII87_20185 PF11131 Rap-phr extracellular signalling GII87_20190 PF04073 Aminoacyl-tRNA editing domain GII87_20195 PF00491 Arginase family GII87_20200 PF17284 Spermidine synthase tetramerisation domain GII87_20205 PF00912 Transglycosylase GII87_20205 PF00905 Penicillin binding protein transpeptidase domain GII87_20210 PF08741 YwhD family GII87_20215 PF02163 Peptidase family M50 GII87_20220 PF01361 Tautomerase enzyme GII87_20225 PF01047 MarR family GII87_20230 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) GII87_20230 PF02824 TGS domain GII87_20230 PF03129 Anticodon binding domain GII87_20230 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain GII87_20235 PF07690 Major Facilitator Superfamily GII87_20240 PF02082 Transcriptional regulator GII87_20250 PF01966 HD domain GII87_20255 PF07293 Protein of unknown function (DUF1450) GII87_20265 PF00892 EamA-like transporter family GII87_20270 PF03099 Biotin/lipoate A/B protein ligase family GII87_20275 PF03466 LysR substrate binding domain GII87_20275 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GII87_20280 PF01515 Phosphate acetyl/butaryl transferase GII87_20295 PF00155 Aminotransferase class I and II GII87_20300 PF07690 Major Facilitator Superfamily GII87_20315 PF07883 Cupin domain GII87_20325 PF07690 Major Facilitator Superfamily GII87_20330 PF00324 Amino acid permease GII87_20335 PF01546 Peptidase family M20/M25/M40 GII87_20340 PF00171 Aldehyde dehydrogenase family GII87_20345 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase GII87_20345 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain GII87_20350 PF17735 Biofilm surface layer A GII87_20355 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase GII87_20360 PF04321 RmlD substrate binding domain GII87_20365 PF16363 GDP-mannose 4,6 dehydratase GII87_20370 PF00483 Nucleotidyl transferase GII87_20375 PF04101 Glycosyltransferase family 28 C-terminal domain GII87_20380 PF02348 Cytidylyltransferase GII87_20385 PF08666 SAF domain GII87_20385 PF03102 NeuB family GII87_20390 PF00583 Acetyltransferase (GNAT) family GII87_20395 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family GII87_20400 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase GII87_20405 PF00535 Glycosyl transferase family 2 GII87_20410 PF09671 Spore coat protein (Spore_GerQ) GII87_20415 PF04241 Protein of unknown function (DUF423) GII87_20420 PF00860 Permease family GII87_20425 PF17261 Family of unknown function (DUF5327) GII87_20430 PF00171 Aldehyde dehydrogenase family GII87_20435 PF03167 Uracil DNA glycosylase superfamily GII87_20440 PF00535 Glycosyl transferase family 2 GII87_20455 PF03551 Transcriptional regulator PadR-like family GII87_20460 PF08543 Phosphomethylpyrimidine kinase GII87_20470 PF08244 Glycosyl hydrolases family 32 C terminal GII87_20470 PF00251 Glycosyl hydrolases family 32 N-terminal domain GII87_20475 PF00367 phosphotransferase system, EIIB GII87_20475 PF02378 Phosphotransferase system, EIIC GII87_20480 PF01226 Formate/nitrite transporter GII87_20485 PF00874 PRD domain GII87_20485 PF03123 CAT RNA binding domain GII87_20495 PF02225 PA domain GII87_20495 PF05922 Peptidase inhibitor I9 GII87_20495 PF00082 Subtilase family GII87_20495 PF13860 FlgD Ig-like domain GII87_20500 PF00296 Luciferase-like monooxygenase GII87_20505 PF00881 Nitroreductase family GII87_20510 PF01098 Cell cycle protein GII87_20515 PF17368 Spore morphogenesis and germination YwcE GII87_20520 PF03626 Prokaryotic Cytochrome C oxidase subunit IV GII87_20525 PF00510 Cytochrome c oxidase subunit III GII87_20530 PF00115 Cytochrome C and Quinol oxidase polypeptide I GII87_20535 PF00116 Cytochrome C oxidase subunit II, periplasmic domain GII87_20535 PF02790 Cytochrome C oxidase subunit II, transmembrane domain GII87_20540 PF04226 Transglycosylase associated protein GII87_20545 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain GII87_20545 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain GII87_20550 PF10509 Galactokinase galactose-binding signature GII87_20550 PF00288 GHMP kinases N terminal domain GII87_20550 PF08544 GHMP kinases C terminal GII87_20555 PF04138 GtrA-like protein GII87_20560 PF00440 Bacterial regulatory proteins, tetR family GII87_20565 PF08671 Anti-repressor SinI GII87_20570 PF04341 Protein of unknown function, DUF485 GII87_20575 PF00474 Sodium:solute symporter family GII87_20580 PF01323 DSBA-like thioredoxin domain GII87_20585 PF10518 TAT (twin-arginine translocation) pathway signal sequence GII87_20585 PF04261 Dyp-type peroxidase family GII87_20590 PF09375 Imelysin GII87_20595 PF03239 Iron permease FTR1 family GII87_20600 PF02581 Thiamine monophosphate synthase GII87_20605 PF02110 Hydroxyethylthiazole kinase family GII87_20610 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GII87_20610 PF03466 LysR substrate binding domain GII87_20615 PF03788 LrgA family GII87_20620 PF04172 LrgB-like family GII87_20625 PF12832 MFS_1 like family GII87_20630 PF09962 Uncharacterized conserved protein (DUF2196) GII87_20635 PF17785 PUA-like domain GII87_20635 PF10672 S-adenosylmethionine-dependent methyltransferase GII87_20640 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily GII87_20645 PF10924 Protein of unknown function (DUF2711) GII87_20650 PF02378 Phosphotransferase system, EIIC GII87_20655 PF00082 Subtilase family GII87_20660 PF00367 phosphotransferase system, EIIB GII87_20660 PF02378 Phosphotransferase system, EIIC GII87_20665 PF00874 PRD domain GII87_20665 PF03123 CAT RNA binding domain GII87_20670 PF01501 Glycosyl transferase family 8 GII87_20675 PF09529 Integral membrane protein (intg_mem_TP0381) GII87_20680 PF01047 MarR family GII87_20685 PF01479 S4 domain GII87_20685 PF00579 tRNA synthetases class I (W and Y) GII87_20690 PF02225 PA domain GII87_20690 PF04389 Peptidase family M28 GII87_20695 PF04607 Region found in RelA / SpoT proteins GII87_20700 PF01040 UbiA prenyltransferase family GII87_20710 PF12459 D-Ala-teichoic acid biosynthesis protein GII87_20715 PF00501 AMP-binding enzyme GII87_20715 PF13193 AMP-binding enzyme C-terminal domain GII87_20720 PF03062 MBOAT, membrane-bound O-acyltransferase family GII87_20725 PF00550 Phosphopantetheine attachment site GII87_20730 PF04914 DltD protein GII87_20735 PF00106 short chain dehydrogenase GII87_20740 PF01063 Amino-transferase class IV GII87_20745 PF11975 Family 4 glycosyl hydrolase C-terminal domain GII87_20745 PF02056 Family 4 glycosyl hydrolase GII87_20750 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit GII87_20755 PF02378 Phosphotransferase system, EIIC GII87_20760 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit GII87_20765 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 GII87_20765 PF00874 PRD domain GII87_20765 PF05043 Mga helix-turn-helix domain GII87_20765 PF08279 HTH domain GII87_20775 PF02245 Methylpurine-DNA glycosylase (MPG) GII87_20780 PF06628 Catalase-related immune-responsive GII87_20780 PF00199 Catalase GII87_20785 PF07690 Major Facilitator Superfamily GII87_20790 PF12679 ABC-2 family transporter protein GII87_20795 PF00005 ABC transporter GII87_20795 PF13732 Domain of unknown function (DUF4162) GII87_20800 PF13396 Phospholipase_D-nuclease N-terminal GII87_20810 PF17280 Family of unknown function (DUF5345) GII87_20815 PF08281 Sigma-70, region 4 GII87_20815 PF04542 Sigma-70 region 2 GII87_20820 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin GII87_20825 PF01256 Carbohydrate kinase GII87_20830 PF00664 ABC transporter transmembrane region GII87_20830 PF00005 ABC transporter GII87_20835 PF00664 ABC transporter transmembrane region GII87_20835 PF00005 ABC transporter GII87_20840 PF02322 Cytochrome bd terminal oxidase subunit II GII87_20845 PF01654 Cytochrome bd terminal oxidase subunit I GII87_20850 PF03390 2-hydroxycarboxylate transporter family GII87_20855 PF01435 Peptidase family M48 GII87_20865 PF01522 Polysaccharide deacetylase GII87_20870 PF00005 ABC transporter GII87_20870 PF03459 TOBE domain GII87_20870 PF17912 MalK OB fold domain GII87_20875 PF13556 PucR C-terminal helix-turn-helix domain GII87_20880 PF00171 Aldehyde dehydrogenase family GII87_20885 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) GII87_20885 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 GII87_20890 PF11611 Domain of unknown function (DUF4352) GII87_20895 PF16363 GDP-mannose 4,6 dehydratase GII87_20900 PF01161 Phosphatidylethanolamine-binding protein GII87_20905 PF03466 LysR substrate binding domain GII87_20905 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GII87_20915 PF07730 Histidine kinase GII87_20920 PF00072 Response regulator receiver domain GII87_20920 PF00196 Bacterial regulatory proteins, luxR family GII87_20925 PF01546 Peptidase family M20/M25/M40 GII87_20925 PF07687 Peptidase dimerisation domain GII87_20935 PF04525 LURP-one-related GII87_20940 PF01717 Cobalamin-independent synthase, Catalytic domain GII87_20945 PF01717 Cobalamin-independent synthase, Catalytic domain GII87_20955 PF01144 Coenzyme A transferase GII87_20960 PF01144 Coenzyme A transferase GII87_20970 PF08241 Methyltransferase domain GII87_20975 PF07662 Na+ dependent nucleoside transporter C-terminus GII87_20975 PF01773 Na+ dependent nucleoside transporter N-terminus GII87_20990 PF18011 C-terminal domain found in long catalases GII87_20990 PF06628 Catalase-related immune-responsive GII87_20990 PF00199 Catalase GII87_20995 PF03600 Citrate transporter GII87_21000 PF00722 Glycosyl hydrolases family 16 GII87_21005 PF00874 PRD domain GII87_21005 PF03123 CAT RNA binding domain GII87_21015 PF11700 Vacuole effluxer Atg22 like GII87_21020 PF03880 DbpA RNA binding domain GII87_21020 PF00271 Helicase conserved C-terminal domain GII87_21020 PF00270 DEAD/DEAH box helicase GII87_21025 PF13472 GDSL-like Lipase/Acylhydrolase family GII87_21045 PF14176 YxiJ-like protein GII87_21050 PF10898 Protein of unknown function (DUF2716) GII87_21085 PF05593 RHS Repeat GII87_21090 PF00892 EamA-like transporter family GII87_21095 PF00582 Universal stress protein family GII87_21100 PF00232 Glycosyl hydrolase family 1 GII87_21105 PF02378 Phosphotransferase system, EIIC GII87_21105 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 GII87_21105 PF00367 phosphotransferase system, EIIB GII87_21110 PF18593 CdiI immunity protein GII87_21120 PF14449 Pre-toxin TG GII87_21120 PF04740 LXG domain of WXG superfamily GII87_21130 PF16888 Domain of unknown function (DUF5082) GII87_21135 PF16369 C-terminal lipocalin-like domain GII87_21135 PF04616 Glycosyl hydrolases family 43 GII87_21145 PF09021 HutP GII87_21150 PF00221 Aromatic amino acid lyase GII87_21155 PF17391 Urocanase N-terminal domain GII87_21155 PF17392 Urocanase C-terminal domain GII87_21155 PF01175 Urocanase Rossmann-like domain GII87_21160 PF01979 Amidohydrolase family GII87_21165 PF00491 Arginase family GII87_21170 PF00324 Amino acid permease GII87_21175 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain GII87_21175 PF00591 Glycosyl transferase family, a/b domain GII87_21175 PF02885 Glycosyl transferase family, helical bundle domain GII87_21180 PF01773 Na+ dependent nucleoside transporter N-terminus GII87_21180 PF07662 Na+ dependent nucleoside transporter C-terminus GII87_21185 PF01791 DeoC/LacD family aldolase GII87_21190 PF04198 Putative sugar-binding domain GII87_21195 PF06724 Domain of Unknown Function (DUF1206) GII87_21200 PF04346 Ethanolamine utilisation protein, EutH GII87_21205 PF03972 MmgE/PrpD family GII87_21215 PF00005 ABC transporter GII87_21220 PF00528 Binding-protein-dependent transport system inner membrane component GII87_21225 PF00497 Bacterial extracellular solute-binding proteins, family 3 GII87_21245 PF02275 Linear amide C-N hydrolases, choloylglycine hydrolase family GII87_21260 PF11631 Protein of unknown function (DUF3255) GII87_21280 PF01497 Periplasmic binding protein GII87_21285 PF06486 Protein of unknown function (DUF1093) GII87_21290 PF02687 FtsX-like permease family GII87_21295 PF00005 ABC transporter GII87_21300 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GII87_21305 PF00072 Response regulator receiver domain GII87_21305 PF00486 Transcriptional regulatory protein, C terminal GII87_21310 PF01116 Fructose-bisphosphate aldolase class-II GII87_21315 PF01261 Xylose isomerase-like TIM barrel GII87_21320 PF01261 Xylose isomerase-like TIM barrel GII87_21325 PF02894 Oxidoreductase family, C-terminal alpha/beta domain GII87_21325 PF01408 Oxidoreductase family, NAD-binding Rossmann fold GII87_21330 PF07690 Major Facilitator Superfamily GII87_21335 PF01261 Xylose isomerase-like TIM barrel GII87_21340 PF00205 Thiamine pyrophosphate enzyme, central domain GII87_21340 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain GII87_21340 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain GII87_21345 PF00294 pfkB family carbohydrate kinase GII87_21350 PF04962 KduI/IolB family GII87_21355 PF00171 Aldehyde dehydrogenase family GII87_21360 PF00455 DeoR C terminal sensor domain GII87_21360 PF08220 DeoR-like helix-turn-helix domain GII87_21365 PF00248 Aldo/keto reductase family GII87_21375 PF10850 Protein of unknown function (DUF2653) GII87_21380 PF00083 Sugar (and other) transporter GII87_21385 PF00183 Hsp90 protein GII87_21400 PF00440 Bacterial regulatory proteins, tetR family GII87_21405 PF00171 Aldehyde dehydrogenase family GII87_21410 PF00583 Acetyltransferase (GNAT) family GII87_21415 PF08007 Cupin superfamily protein GII87_21420 PF08241 Methyltransferase domain GII87_21425 PF05402 Coenzyme PQQ synthesis protein D (PqqD) GII87_21435 PF13537 Glutamine amidotransferase domain GII87_21435 PF00733 Asparagine synthase GII87_21440 PF07690 Major Facilitator Superfamily GII87_21445 PF13570 PQQ-like domain GII87_21445 PF01011 PQQ enzyme repeat GII87_21445 PF13360 PQQ-like domain GII87_21450 PF17369 Family of unknown function (DUF5391) GII87_21455 PF06271 RDD family GII87_21460 PF04235 Protein of unknown function (DUF418) GII87_21465 PF07883 Cupin domain GII87_21470 PF00440 Bacterial regulatory proteins, tetR family GII87_21475 PF00106 short chain dehydrogenase GII87_21480 PF01047 MarR family GII87_21485 PF03788 LrgA family GII87_21490 PF04172 LrgB-like family GII87_21495 PF04230 Polysaccharide pyruvyl transferase GII87_21500 PF02595 Glycerate kinase family GII87_21505 PF00392 Bacterial regulatory proteins, gntR family GII87_21505 PF07729 FCD domain GII87_21510 PF02782 FGGY family of carbohydrate kinases, C-terminal domain GII87_21510 PF00370 FGGY family of carbohydrate kinases, N-terminal domain GII87_21515 PF02447 GntP family permease GII87_21520 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain GII87_21520 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase GII87_21525 PF00578 AhpC/TSA family GII87_21530 PF13192 Thioredoxin domain GII87_21530 PF07992 Pyridine nucleotide-disulphide oxidoreductase GII87_21535 PF00232 Glycosyl hydrolase family 1 GII87_21540 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 GII87_21545 PF00367 phosphotransferase system, EIIB GII87_21545 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 GII87_21545 PF02378 Phosphotransferase system, EIIC GII87_21550 PF07702 UTRA domain GII87_21550 PF00392 Bacterial regulatory proteins, gntR family GII87_21565 PF00005 ABC transporter GII87_21575 PF04055 Radical SAM superfamily GII87_21585 PF06874 Firmicute fructose-1,6-bisphosphatase GII87_21590 PF10088 Uncharacterised protein conserved in bacteria (DUF2326) GII87_21590 PF13476 AAA domain GII87_21600 PF00149 Calcineurin-like phosphoesterase GII87_21605 PF02590 Predicted SPOUT methyltransferase GII87_21610 PF14116 YyzF-like protein GII87_21620 PF08240 Alcohol dehydrogenase GroES-like domain GII87_21620 PF00107 Zinc-binding dehydrogenase GII87_21630 PF10852 Protein of unknown function (DUF2651) GII87_21645 PF00583 Acetyltransferase (GNAT) family GII87_21650 PF18801 response regulator aspartate phosphatase H, N terminal GII87_21660 PF00491 Arginase family GII87_21665 PF00324 Amino acid permease GII87_21670 PF00202 Aminotransferase class-III GII87_21675 PF13426 PAS domain GII87_21675 PF00158 Sigma-54 interaction domain GII87_21675 PF02954 Bacterial regulatory protein, Fis family GII87_21690 PF13180 PDZ domain GII87_21695 PF00753 Metallo-beta-lactamase superfamily GII87_21700 PF09648 YycH protein GII87_21705 PF07435 YycH protein GII87_21710 PF00512 His Kinase A (phospho-acceptor) domain GII87_21710 PF13426 PAS domain GII87_21710 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GII87_21710 PF00672 HAMP domain GII87_21715 PF00072 Response regulator receiver domain GII87_21715 PF00486 Transcriptional regulatory protein, C terminal GII87_21740 PF00709 Adenylosuccinate synthetase GII87_21745 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily GII87_21750 PF00772 DnaB-like helicase N terminal domain GII87_21750 PF03796 DnaB-like helicase C terminal domain GII87_21755 PF09954 Uncharacterized protein conserved in bacteria (DUF2188) GII87_21765 PF14174 YycC-like protein GII87_21770 PF07690 Major Facilitator Superfamily GII87_21775 PF13231 Dolichyl-phosphate-mannose-protein mannosyltransferase GII87_21780 PF01281 Ribosomal protein L9, N-terminal domain GII87_21780 PF03948 Ribosomal protein L9, C-terminal domain GII87_21785 PF02272 DHHA1 domain GII87_21785 PF01368 DHH family GII87_21790 PF09991 Predicted membrane protein (DUF2232) GII87_21800 PF07875 Coat F domain GII87_21805 PF01638 HxlR-like helix-turn-helix GII87_21810 PF02833 DHHA2 domain GII87_21810 PF01368 DHH family GII87_21825 PF07690 Major Facilitator Superfamily GII87_21840 PF10916 Protein of unknown function (DUF2712) GII87_21845 PF10920 Protein of unknown function (DUF2705) GII87_21855 PF10920 Protein of unknown function (DUF2705) GII87_21860 PF00005 ABC transporter GII87_21875 PF13474 SnoaL-like domain GII87_21880 PF00805 Pentapeptide repeats (8 copies) GII87_21885 PF07690 Major Facilitator Superfamily GII87_21890 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GII87_21890 PF03466 LysR substrate binding domain GII87_21895 PF13673 Acetyltransferase (GNAT) domain GII87_21905 PF00753 Metallo-beta-lactamase superfamily GII87_21910 PF01047 MarR family GII87_21915 PF13673 Acetyltransferase (GNAT) domain GII87_21925 PF00583 Acetyltransferase (GNAT) family GII87_21930 PF04237 YjbR GII87_21935 PF01872 RibD C-terminal domain GII87_21945 PF07690 Major Facilitator Superfamily GII87_21950 PF08050 Tetracycline resistance leader peptide GII87_21955 PF03190 Protein of unknown function, DUF255 GII87_21960 PF13411 MerR HTH family regulatory protein GII87_21965 PF00892 EamA-like transporter family GII87_21970 PF03190 Protein of unknown function, DUF255 GII87_21975 PF02517 CPBP intramembrane metalloprotease GII87_21980 PF00083 Sugar (and other) transporter GII87_21985 PF14602 Hexapeptide repeat of succinyl-transferase GII87_21985 PF12464 Maltose acetyltransferase GII87_21990 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily GII87_21995 PF00356 Bacterial regulatory proteins, lacI family GII87_21995 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family GII87_22000 PF03372 Endonuclease/Exonuclease/phosphatase family GII87_22005 PF01084 Ribosomal protein S18 GII87_22010 PF00436 Single-strand binding protein family GII87_22015 PF01250 Ribosomal protein S6 GII87_22020 PF06071 Protein of unknown function (DUF933) GII87_22020 PF01926 50S ribosome-binding GTPase GII87_22025 PF00384 Molybdopterin oxidoreductase GII87_22025 PF04879 Molybdopterin oxidoreductase Fe4S4 domain GII87_22025 PF01568 Molydopterin dinucleotide binding domain GII87_22030 PF06107 Bacterial protein of unknown function (DUF951) GII87_22040 PF06866 Protein of unknown function (DUF1256) GII87_22045 PF17762 HTH domain found in ParB protein GII87_22045 PF02195 ParB-like nuclease domain GII87_22050 PF13614 AAA domain GII87_22055 PF06713 Bacterial PH domain GII87_22060 PF17762 HTH domain found in ParB protein GII87_22060 PF02195 ParB-like nuclease domain GII87_22065 PF02527 rRNA small subunit methyltransferase G GII87_22070 PF13932 GidA associated domain GII87_22070 PF01134 Glucose inhibited division protein A GII87_22075 PF12631 MnmE helical domain GII87_22075 PF10396 GTP-binding protein TrmE N-terminus GII87_22075 PF01926 50S ribosome-binding GTPase GII87_22080 PF14804 Jag N-terminus GII87_22080 PF01424 R3H domain GII87_22085 PF02096 60Kd inner membrane protein GII87_22090 PF00825 Ribonuclease P GII87_22095 PF00468 Ribosomal protein L34 GII87_22100 PF03989 DNA gyrase C-terminal domain, beta-propeller GII87_22100 PF00521 DNA gyrase/topoisomerase IV, subunit A GII87_22155 PF14449 Pre-toxin TG GII87_22155 PF14410 HNH/ENDO VII superfamily nuclease with conserved GHE residues GII87_22155 PF04740 LXG domain of WXG superfamily GII87_22210 PF01464 Transglycosylase SLT domain GII87_22300 PF18801 response regulator aspartate phosphatase H, N terminal GII87_22320 PF06725 3D domain GII87_22320 PF01476 LysM domain GII87_22330 PF00589 Phage integrase family GII87_22365 PF10850 Protein of unknown function (DUF2653) GII87_22405 PF02867 Ribonucleotide reductase, barrel domain GII87_22405 PF00317 Ribonucleotide reductase, all-alpha domain GII87_22405 PF03477 ATP cone domain GII87_22410 PF00268 Ribonucleotide reductase, small chain GII87_22415 PF00258 Flavodoxin GII87_22455 PF01368 DHH family GII87_22455 PF17768 RecJ OB domain GII87_22490 PF00075 RNase H GII87_22510 PF02811 PHP domain GII87_22510 PF14579 Helix-hairpin-helix motif GII87_22510 PF17657 Bacterial DNA polymerase III alpha subunit finger domain GII87_22510 PF07733 Bacterial DNA polymerase III alpha NTPase domain GII87_22530 PF00625 Guanylate kinase GII87_22565 PF00265 Thymidine kinase GII87_22575 PF18008 Replication initiator protein A C-terminal domain GII87_22575 PF06970 Replication initiator protein A (RepA) N-terminus GII87_22580 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GII87_22580 PF01751 Toprim domain GII87_22580 PF00986 DNA gyrase B subunit, carboxyl terminus GII87_22580 PF00204 DNA gyrase B