locus-tag class description GII89_00005 PF11638 DnaA N-terminal domain GII89_00005 PF08299 Bacterial dnaA protein helix-turn-helix GII89_00005 PF00308 Bacterial dnaA protein GII89_00010 PF00712 DNA polymerase III beta subunit, N-terminal domain GII89_00010 PF02767 DNA polymerase III beta subunit, central domain GII89_00010 PF02768 DNA polymerase III beta subunit, C-terminal domain GII89_00020 PF02463 RecF/RecN/SMC N terminal domain GII89_00025 PF04025 Domain of unknown function (DUF370) GII89_00030 PF01751 Toprim domain GII89_00030 PF00204 DNA gyrase B GII89_00030 PF00986 DNA gyrase B subunit, carboxyl terminus GII89_00030 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GII89_00035 PF00521 DNA gyrase/topoisomerase IV, subunit A GII89_00035 PF03989 DNA gyrase C-terminal domain, beta-propeller GII89_00065 PF14175 YaaC-like Protein GII89_00070 PF00478 IMP dehydrogenase / GMP reductase domain GII89_00070 PF00571 CBS domain GII89_00075 PF07943 Penicillin-binding protein 5, C-terminal domain GII89_00075 PF00768 D-alanyl-D-alanine carboxypeptidase GII89_00080 PF01680 SOR/SNZ family GII89_00085 PF01174 SNO glutamine amidotransferase family GII89_00090 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) GII89_00090 PF02403 Seryl-tRNA synthetase N-terminal domain GII89_00100 PF01712 Deoxynucleoside kinase GII89_00105 PF01712 Deoxynucleoside kinase GII89_00110 PF00704 Glycosyl hydrolases family 18 GII89_00110 PF01476 LysM domain GII89_00115 PF00857 Isochorismatase family GII89_00120 PF14437 MafB19-like deaminase GII89_00130 PF12169 DNA polymerase III subunits gamma and tau domain III GII89_00135 PF02575 YbaB/EbfC DNA-binding family GII89_00140 PF13662 Toprim domain GII89_00140 PF02132 RecR protein GII89_00145 PF10704 Protein of unknown function (DUF2508) GII89_00150 PF07441 SigmaK-factor processing regulatory protein BofA GII89_00180 PF10764 Inhibitor of sigma-G Gin GII89_00185 PF10112 5-bromo-4-chloroindolyl phosphate hydrolysis protein GII89_00190 PF05816 Toxic anion resistance protein (TelA) GII89_00195 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain GII89_00195 PF01276 Orn/Lys/Arg decarboxylase, major domain GII89_00200 PF02223 Thymidylate kinase GII89_00205 PF06153 Cyclic-di-AMP receptor GII89_00210 PF03885 Protein of unknown function (DUF327) GII89_00215 PF09115 DNA polymerase III, delta subunit, C terminal GII89_00220 PF04468 PSP1 C-terminal conserved region GII89_00225 PF06156 Initiation control protein YabA GII89_00230 PF05175 Methyltransferase small domain GII89_00235 PF01541 GIY-YIG catalytic domain GII89_00240 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases GII89_00245 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin GII89_00245 PF18277 AbrB C-terminal domain GII89_00250 PF01588 Putative tRNA binding domain GII89_00250 PF09334 tRNA synthetases class I (M) GII89_00250 PF08264 Anticodon-binding domain of tRNA GII89_00255 PF01026 TatD related DNase GII89_00260 PF07501 G5 domain GII89_00260 PF06725 3D domain GII89_00260 PF03990 G5-linked-Ubiquitin-like domain GII89_00265 PF13662 Toprim domain GII89_00265 PF13331 Domain of unknown function (DUF4093) GII89_00270 PF00398 Ribosomal RNA adenine dimethylase GII89_00275 PF05582 YabG peptidase U57 GII89_00280 PF06257 Biofilm formation stimulator VEG GII89_00285 PF00269 Small, acid-soluble spore proteins, alpha/beta type GII89_00290 PF00288 GHMP kinases N terminal domain GII89_00290 PF08544 GHMP kinases C terminal GII89_00295 PF00156 Phosphoribosyl transferase domain GII89_00295 PF09182 Bacterial purine repressor, N-terminal GII89_00300 PF01042 Endoribonuclease L-PSP GII89_00305 PF04026 SpoVG GII89_00310 PF00483 Nucleotidyl transferase GII89_00310 PF00132 Bacterial transferase hexapeptide (six repeats) GII89_00315 PF14572 Phosphoribosyl synthetase-associated domain GII89_00315 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase GII89_00320 PF14693 Ribosomal protein TL5, C-terminal domain GII89_00320 PF01386 Ribosomal L25p family GII89_00325 PF01195 Peptidyl-tRNA hydrolase GII89_00330 PF10955 Protein of unknown function (DUF2757) GII89_00335 PF03461 TRCF domain GII89_00335 PF02559 CarD-like/TRCF domain GII89_00335 PF00270 DEAD/DEAH box helicase GII89_00335 PF00271 Helicase conserved C-terminal domain GII89_00335 PF17757 UvrB interaction domain GII89_00340 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin GII89_00340 PF15714 Stage V sporulation protein T C-terminal, transcription factor GII89_00345 PF01943 Polysaccharide biosynthesis protein GII89_00345 PF14667 Polysaccharide biosynthesis C-terminal domain GII89_00350 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases GII89_00350 PF03819 MazG nucleotide pyrophosphohydrolase domain GII89_00355 PF01479 S4 domain GII89_00360 PF07873 YabP family GII89_00365 PF09578 Spore cortex protein YabQ (Spore_YabQ) GII89_00370 PF04977 Septum formation initiator GII89_00375 PF00575 S1 RNA binding domain GII89_00390 PF07228 Stage II sporulation protein E (SpoIIE) GII89_00395 PF00092 von Willebrand factor type A domain GII89_00400 PF00069 Protein kinase domain GII89_00405 PF09179 TilS substrate binding domain GII89_00405 PF01171 PP-loop family GII89_00405 PF11734 TilS substrate C-terminal domain GII89_00415 PF00004 ATPase family associated with various cellular activities (AAA) GII89_00415 PF06480 FtsH Extracellular GII89_00415 PF01434 Peptidase family M41 GII89_00415 PF17862 AAA+ lid domain GII89_00420 PF03309 Type III pantothenate kinase GII89_00425 PF01430 Hsp33 protein GII89_00430 PF13145 PPIC-type PPIASE domain GII89_00435 PF00291 Pyridoxal-phosphate dependent enzyme GII89_00440 PF04715 Anthranilate synthase component I, N terminal region GII89_00440 PF00425 chorismate binding enzyme GII89_00445 PF00117 Glutamine amidotransferase class-I GII89_00450 PF01063 Amino-transferase class IV GII89_00455 PF00809 Pterin binding enzyme GII89_00460 PF02152 Dihydroneopterin aldolase GII89_00465 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) GII89_00470 PF01381 Helix-turn-helix GII89_00475 PF01207 Dihydrouridine synthase (Dus) GII89_00480 PF01336 OB-fold nucleic acid binding domain GII89_00480 PF00152 tRNA synthetases class II (D, K and N) GII89_00560 PF17727 CtsR C-terminal dimerization domain GII89_00560 PF05848 CtsR N-terminal HTH domain GII89_00565 PF02151 UvrB/uvrC motif GII89_00570 PF00217 ATP:guanido phosphotransferase, C-terminal catalytic domain GII89_00575 PF10431 C-terminal, D2-small domain, of ClpB protein GII89_00575 PF17871 AAA lid domain GII89_00575 PF07724 AAA domain (Cdc48 subfamily) GII89_00575 PF00004 ATPase family associated with various cellular activities (AAA) GII89_00575 PF02861 Clp amino terminal domain, pathogenicity island component GII89_00580 PF18073 Rubredoxin metal binding domain GII89_00585 PF10635 DisA bacterial checkpoint controller linker region GII89_00585 PF02457 DisA bacterial checkpoint controller nucleotide-binding GII89_00595 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase GII89_00600 PF02542 YgbB family GII89_00605 PF00749 tRNA synthetases class I (E and Q), catalytic domain GII89_00610 PF00132 Bacterial transferase hexapeptide (six repeats) GII89_00610 PF06426 Serine acetyltransferase, N-terminal GII89_00615 PF09190 DALR domain GII89_00615 PF01406 tRNA synthetases class I (C) catalytic domain GII89_00620 PF00636 Ribonuclease III domain GII89_00625 PF08032 RNA 2'-O ribose methyltransferase substrate binding GII89_00625 PF00588 SpoU rRNA Methylase family GII89_00630 PF05991 YacP-like NYN domain GII89_00635 PF04542 Sigma-70 region 2 GII89_00635 PF08281 Sigma-70, region 4 GII89_00640 PF00471 Ribosomal protein L33 GII89_00645 PF00584 SecE/Sec61-gamma subunits of protein translocation complex GII89_00650 PF00467 KOW motif GII89_00650 PF02357 Transcription termination factor nusG GII89_00655 PF00298 Ribosomal protein L11, RNA binding domain GII89_00655 PF03946 Ribosomal protein L11, N-terminal domain GII89_00660 PF00687 Ribosomal protein L1p/L10e family GII89_00665 PF00466 Ribosomal protein L10 GII89_00670 PF16320 Ribosomal protein L7/L12 dimerisation domain GII89_00670 PF00542 Ribosomal protein L7/L12 C-terminal domain GII89_00675 PF05175 Methyltransferase small domain GII89_00680 PF04561 RNA polymerase Rpb2, domain 2 GII89_00680 PF10385 RNA polymerase beta subunit external 1 domain GII89_00680 PF00562 RNA polymerase Rpb2, domain 6 GII89_00680 PF04563 RNA polymerase beta subunit GII89_00680 PF04560 RNA polymerase Rpb2, domain 7 GII89_00680 PF04565 RNA polymerase Rpb2, domain 3 GII89_00685 PF04997 RNA polymerase Rpb1, domain 1 GII89_00685 PF04998 RNA polymerase Rpb1, domain 5 GII89_00685 PF05000 RNA polymerase Rpb1, domain 4 GII89_00685 PF00623 RNA polymerase Rpb1, domain 2 GII89_00685 PF04983 RNA polymerase Rpb1, domain 3 GII89_00690 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family GII89_00695 PF00164 Ribosomal protein S12/S23 GII89_00700 PF00177 Ribosomal protein S7p/S5e GII89_00705 PF00009 Elongation factor Tu GTP binding domain GII89_00705 PF00679 Elongation factor G C-terminus GII89_00705 PF14492 Elongation Factor G, domain II GII89_00705 PF03144 Elongation factor Tu domain 2 GII89_00705 PF03764 Elongation factor G, domain IV GII89_00710 PF00009 Elongation factor Tu GTP binding domain GII89_00710 PF03144 Elongation factor Tu domain 2 GII89_00710 PF03143 Elongation factor Tu C-terminal domain GII89_00715 PF12146 Serine aminopeptidase, S33 GII89_00720 PF00338 Ribosomal protein S10p/S20e GII89_00725 PF00297 Ribosomal protein L3 GII89_00730 PF00573 Ribosomal protein L4/L1 family GII89_00735 PF00276 Ribosomal protein L23 GII89_00740 PF00181 Ribosomal Proteins L2, RNA binding domain GII89_00740 PF03947 Ribosomal Proteins L2, C-terminal domain GII89_00745 PF00203 Ribosomal protein S19 GII89_00750 PF00237 Ribosomal protein L22p/L17e GII89_00755 PF07650 KH domain GII89_00755 PF00189 Ribosomal protein S3, C-terminal domain GII89_00760 PF00252 Ribosomal protein L16p/L10e GII89_00765 PF00831 Ribosomal L29 protein GII89_00770 PF00366 Ribosomal protein S17 GII89_00775 PF00238 Ribosomal protein L14p/L23e GII89_00780 PF00467 KOW motif GII89_00780 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 GII89_00785 PF00673 ribosomal L5P family C-terminus GII89_00785 PF00281 Ribosomal protein L5 GII89_00790 PF00253 Ribosomal protein S14p/S29e GII89_00795 PF00410 Ribosomal protein S8 GII89_00800 PF00347 Ribosomal protein L6 GII89_00805 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast GII89_00810 PF03719 Ribosomal protein S5, C-terminal domain GII89_00810 PF00333 Ribosomal protein S5, N-terminal domain GII89_00815 PF00327 Ribosomal protein L30p/L7e GII89_00820 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A GII89_00825 PF00344 SecY translocase GII89_00830 PF05191 Adenylate kinase, active site lid GII89_00835 PF00557 Metallopeptidase family M24 GII89_00845 PF01176 Translation initiation factor 1A / IF-1 GII89_00850 PF00444 Ribosomal protein L36 GII89_00855 PF00416 Ribosomal protein S13/S18 GII89_00860 PF00411 Ribosomal protein S11 GII89_00865 PF01000 RNA polymerase Rpb3/RpoA insert domain GII89_00865 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain GII89_00865 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain GII89_00870 PF01196 Ribosomal protein L17 GII89_00875 PF00005 ABC transporter GII89_00880 PF00005 ABC transporter GII89_00885 PF02361 Cobalt transport protein GII89_00890 PF01416 tRNA pseudouridine synthase GII89_00895 PF00572 Ribosomal protein L13 GII89_00900 PF00380 Ribosomal protein S9/S16 GII89_00905 PF08241 Methyltransferase domain GII89_00910 PF10730 Protein of unknown function (DUF2521) GII89_00915 PF01520 N-acetylmuramoyl-L-alanine amidase GII89_00920 PF10609 NUBPL iron-transfer P-loop NTPase GII89_00925 PF17898 Spore germination GerD central core domain GII89_00930 PF14089 KinB-signalling pathway activation in sporulation GII89_00935 PF01522 Polysaccharide deacetylase GII89_01015 PF00916 Sulfate permease family GII89_01015 PF01740 STAS domain GII89_01020 PF01758 Sodium Bile acid symporter family GII89_01025 PF00756 Putative esterase GII89_01030 PF01032 FecCD transport family GII89_01035 PF01032 FecCD transport family GII89_01040 PF01497 Periplasmic binding protein GII89_01045 PF01497 Periplasmic binding protein GII89_01045 PF12833 Helix-turn-helix domain GII89_01050 PF07075 Protein of unknown function (DUF1343) GII89_01055 PF01915 Glycosyl hydrolase family 3 C-terminal domain GII89_01055 PF00933 Glycosyl hydrolase family 3 N terminal domain GII89_01060 PF00144 Beta-lactamase GII89_01065 PF02378 Phosphotransferase system, EIIC GII89_01065 PF00367 phosphotransferase system, EIIB GII89_01070 PF01380 SIS domain GII89_01070 PF01418 Helix-turn-helix domain, rpiR family GII89_01075 PF01380 SIS domain GII89_01085 PF04463 Protein of unknown function (DUF523) GII89_01115 PF08281 Sigma-70, region 4 GII89_01115 PF04542 Sigma-70 region 2 GII89_01120 PF13490 Putative zinc-finger GII89_01125 PF02457 DisA bacterial checkpoint controller nucleotide-binding GII89_01130 PF07949 YbbR-like protein GII89_01135 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain GII89_01135 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II GII89_01135 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III GII89_01135 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I GII89_01140 PF01380 SIS domain GII89_01150 PF00730 HhH-GPD superfamily base excision DNA repair protein GII89_01150 PF07934 8-oxoguanine DNA glycosylase, N-terminal domain GII89_01155 PF02805 Metal binding domain of Ada GII89_01155 PF12833 Helix-turn-helix domain GII89_01160 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain GII89_01160 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain GII89_01165 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus GII89_01165 PF00361 Proton-conducting membrane transporter GII89_01170 PF10070 Uncharacterized protein conserved in bacteria (DUF2309) GII89_01185 PF10057 Uncharacterized conserved protein (DUF2294) GII89_01195 PF07690 Major Facilitator Superfamily GII89_01210 PF04055 Radical SAM superfamily GII89_01210 PF13186 Iron-sulfur cluster-binding domain GII89_01215 PF02517 CPBP intramembrane metalloprotease GII89_01220 PF00005 ABC transporter GII89_01235 PF13905 Thioredoxin-like GII89_01240 PF00561 alpha/beta hydrolase fold GII89_01245 PF00072 Response regulator receiver domain GII89_01245 PF00486 Transcriptional regulatory protein, C terminal GII89_01250 PF00672 HAMP domain GII89_01250 PF00512 His Kinase A (phospho-acceptor) domain GII89_01260 PF00069 Protein kinase domain GII89_01270 PF16226 Domain of unknown function (DUF4885) GII89_01275 PF00324 Amino acid permease GII89_01280 PF17334 Minor curli fiber component A GII89_01285 PF17340 Family of unknown function (DUF5370) GII89_01290 PF00905 Penicillin binding protein transpeptidase domain GII89_01295 PF00067 Cytochrome P450 GII89_01305 PF13520 Amino acid permease GII89_01310 PF03009 Glycerophosphoryl diester phosphodiesterase family GII89_01315 PF07690 Major Facilitator Superfamily GII89_01320 PF10852 Protein of unknown function (DUF2651) GII89_01325 PF01047 MarR family GII89_01325 PF00583 Acetyltransferase (GNAT) family GII89_01330 PF07690 Major Facilitator Superfamily GII89_01345 PF08924 Domain of unknown function (DUF1906) GII89_01345 PF01471 Putative peptidoglycan binding domain GII89_01350 PF00892 EamA-like transporter family GII89_01355 PF12833 Helix-turn-helix domain GII89_01355 PF02311 AraC-like ligand binding domain GII89_01360 PF02222 ATP-grasp domain GII89_01365 PF00089 Trypsin GII89_01370 PF10794 Protein of unknown function (DUF2606) GII89_01375 PF12697 Alpha/beta hydrolase family GII89_01380 PF01066 CDP-alcohol phosphatidyltransferase GII89_01385 PF09335 SNARE associated Golgi protein GII89_01390 PF02666 Phosphatidylserine decarboxylase GII89_01400 PF05139 Erythromycin esterase GII89_01405 PF12833 Helix-turn-helix domain GII89_01415 PF00375 Sodium:dicarboxylate symporter family GII89_01420 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 GII89_01420 PF00367 phosphotransferase system, EIIB GII89_01420 PF02378 Phosphotransferase system, EIIC GII89_01425 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase GII89_01435 PF07853 Protein of unknown function (DUF1648) GII89_01440 PF01063 Amino-transferase class IV GII89_01445 PF00324 Amino acid permease GII89_01450 PF02574 Homocysteine S-methyltransferase GII89_01460 PF01235 Sodium:alanine symporter family GII89_01465 PF04960 Glutaminase GII89_01470 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GII89_01475 PF00072 Response regulator receiver domain GII89_01475 PF08664 YcbB domain GII89_01480 PF00701 Dihydrodipicolinate synthetase family GII89_01485 PF00171 Aldehyde dehydrogenase family GII89_01490 PF07690 Major Facilitator Superfamily GII89_01495 PF13378 Enolase C-terminal domain-like GII89_01500 PF00392 Bacterial regulatory proteins, gntR family GII89_01500 PF07729 FCD domain GII89_01505 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus GII89_01505 PF08666 SAF domain GII89_01510 PF01636 Phosphotransferase enzyme family GII89_01515 PF15777 Tryptophan RNA-binding attenuator protein inhibitory protein GII89_01520 PF00892 EamA-like transporter family GII89_01525 PF00072 Response regulator receiver domain GII89_01525 PF00486 Transcriptional regulatory protein, C terminal GII89_01530 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GII89_01530 PF00512 His Kinase A (phospho-acceptor) domain GII89_01535 PF00005 ABC transporter GII89_01550 PF10710 Protein of unknown function (DUF2512) GII89_01555 PF07486 Cell Wall Hydrolase GII89_01560 PF10138 vWA found in TerF C terminus GII89_01570 PF16655 PhoD-like phosphatase, N-terminal domain GII89_01570 PF09423 PhoD-like phosphatase GII89_01575 PF02416 mttA/Hcf106 family GII89_01580 PF00902 Sec-independent protein translocase protein (TatC) GII89_01585 PF01470 Pyroglutamyl peptidase GII89_01590 PF00266 Aminotransferase class-V GII89_01595 PF07690 Major Facilitator Superfamily GII89_01600 PF00440 Bacterial regulatory proteins, tetR family GII89_01605 PF17763 Glutaminase/Asparaginase C-terminal domain GII89_01605 PF00710 Asparaginase, N-terminal GII89_01610 PF01674 Lipase (class 2) GII89_01615 PF06271 RDD family GII89_01620 PF02810 SEC-C motif GII89_01620 PF05225 helix-turn-helix, Psq domain GII89_01625 PF14501 GHKL domain GII89_01630 PF04397 LytTr DNA-binding domain GII89_01630 PF00072 Response regulator receiver domain GII89_01635 PF00005 ABC transporter GII89_01640 PF12679 ABC-2 family transporter protein GII89_01645 PF00248 Aldo/keto reductase family GII89_01650 PF17118 Domain of unknown function (DUF5105) GII89_01650 PF11611 Domain of unknown function (DUF4352) GII89_01660 PF16244 Domain of unknown function (DUF4901) GII89_01665 PF16244 Domain of unknown function (DUF4901) GII89_01670 PF13539 D-alanyl-D-alanine carboxypeptidase GII89_01675 PF18801 response regulator aspartate phosphatase H, N terminal GII89_01685 PF00128 Alpha amylase, catalytic domain GII89_01690 PF01297 Zinc-uptake complex component A periplasmic GII89_01695 PF00005 ABC transporter GII89_01700 PF00950 ABC 3 transport family GII89_01705 PF00296 Luciferase-like monooxygenase GII89_01715 PF02342 TerD domain GII89_01720 PF02342 TerD domain GII89_01725 PF03741 Integral membrane protein TerC family GII89_01730 PF14266 Putative component of 'biosynthetic module' GII89_01735 PF05816 Toxic anion resistance protein (TelA) GII89_01740 PF07690 Major Facilitator Superfamily GII89_01745 PF07690 Major Facilitator Superfamily GII89_01755 PF00005 ABC transporter GII89_01755 PF00571 CBS domain GII89_01760 PF00528 Binding-protein-dependent transport system inner membrane component GII89_01765 PF04069 Substrate binding domain of ABC-type glycine betaine transport system GII89_01770 PF01546 Peptidase family M20/M25/M40 GII89_01770 PF07687 Peptidase dimerisation domain GII89_01775 PF03606 C4-dicarboxylate anaerobic carrier GII89_01785 PF16738 Starch-binding module 26 GII89_01785 PF00128 Alpha amylase, catalytic domain GII89_01790 PF00056 lactate/malate dehydrogenase, NAD binding domain GII89_01790 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain GII89_01795 PF02652 L-lactate permease GII89_01800 PF07690 Major Facilitator Superfamily GII89_01805 PF01047 MarR family GII89_01810 PF01810 LysE type translocator GII89_01815 PF08892 YqcI/YcgG family GII89_01820 PF00324 Amino acid permease GII89_01825 PF09347 Domain of unknown function (DUF1989) GII89_01830 PF02540 NAD synthase GII89_01840 PF01202 Shikimate kinase GII89_01845 PF08241 Methyltransferase domain GII89_01850 PF03466 LysR substrate binding domain GII89_01850 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GII89_01855 PF05448 Acetyl xylan esterase (AXE1) GII89_01860 PF10127 RNA repair pathway DNA polymerase beta family GII89_01865 PF01619 Proline dehydrogenase GII89_01870 PF00171 Aldehyde dehydrogenase family GII89_01875 PF00474 Sodium:solute symporter family GII89_01880 PF13556 PucR C-terminal helix-turn-helix domain GII89_01880 PF17853 GGDEF-like domain GII89_01885 PF09323 Domain of unknown function (DUF1980) GII89_01890 PF03773 Predicted permease GII89_01895 PF00561 alpha/beta hydrolase fold GII89_01900 PF07992 Pyridine nucleotide-disulphide oxidoreductase GII89_01905 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases GII89_01910 PF00355 Rieske [2Fe-2S] domain GII89_01915 PF07992 Pyridine nucleotide-disulphide oxidoreductase GII89_01915 PF18267 Rubredoxin NAD+ reductase C-terminal domain GII89_01915 PF01077 Nitrite and sulphite reductase 4Fe-4S domain GII89_01915 PF04324 BFD-like [2Fe-2S] binding domain GII89_01915 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain GII89_01920 PF04879 Molybdopterin oxidoreductase Fe4S4 domain GII89_01920 PF00384 Molybdopterin oxidoreductase GII89_01920 PF01568 Molydopterin dinucleotide binding domain GII89_01925 PF04324 BFD-like [2Fe-2S] binding domain GII89_01925 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain GII89_01925 PF07992 Pyridine nucleotide-disulphide oxidoreductase GII89_01925 PF18267 Rubredoxin NAD+ reductase C-terminal domain GII89_01930 PF07690 Major Facilitator Superfamily GII89_01935 PF02649 Type I GTP cyclohydrolase folE2 GII89_01940 PF03734 L,D-transpeptidase catalytic domain GII89_01950 PF02492 CobW/HypB/UreG, nucleotide-binding domain GII89_01950 PF07683 Cobalamin synthesis protein cobW C-terminal domain GII89_01955 PF00528 Binding-protein-dependent transport system inner membrane component GII89_01960 PF00497 Bacterial extracellular solute-binding proteins, family 3 GII89_01970 PF06271 RDD family GII89_01975 PF10925 Protein of unknown function (DUF2680) GII89_01980 PF00232 Glycosyl hydrolase family 1 GII89_01985 PF11033 Competence protein J (ComJ) GII89_01990 PF14040 Deoxyribonuclease NucA/NucB GII89_01995 PF17202 Single cache domain 3 GII89_01995 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GII89_01995 PF00672 HAMP domain GII89_02000 PF01380 SIS domain GII89_02005 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family GII89_02010 PF01638 HxlR-like helix-turn-helix GII89_02015 PF00668 Condensation domain GII89_02015 PF00550 Phosphopantetheine attachment site GII89_02015 PF13193 AMP-binding enzyme C-terminal domain GII89_02015 PF00501 AMP-binding enzyme GII89_02020 PF00501 AMP-binding enzyme GII89_02020 PF13193 AMP-binding enzyme C-terminal domain GII89_02020 PF00550 Phosphopantetheine attachment site GII89_02020 PF00668 Condensation domain GII89_02025 PF00975 Thioesterase domain GII89_02025 PF00550 Phosphopantetheine attachment site GII89_02025 PF00668 Condensation domain GII89_02025 PF00501 AMP-binding enzyme GII89_02025 PF13193 AMP-binding enzyme C-terminal domain GII89_02030 PF00975 Thioesterase domain GII89_02035 PF07690 Major Facilitator Superfamily GII89_02040 PF14317 YcxB-like protein GII89_02045 PF00892 EamA-like transporter family GII89_02050 PF00155 Aminotransferase class I and II GII89_02050 PF00392 Bacterial regulatory proteins, gntR family GII89_02055 PF01648 4'-phosphopantetheinyl transferase superfamily GII89_02065 PF00005 ABC transporter GII89_02070 PF00528 Binding-protein-dependent transport system inner membrane component GII89_02075 PF00497 Bacterial extracellular solute-binding proteins, family 3 GII89_02080 PF03466 LysR substrate binding domain GII89_02080 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GII89_02085 PF02441 Flavoprotein GII89_02090 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase GII89_02105 PF00561 alpha/beta hydrolase fold GII89_02110 PF00854 POT family GII89_02115 PF13229 Right handed beta helix region GII89_02115 PF12708 Pectate lyase superfamily protein GII89_02125 PF03323 Bacillus/Clostridium GerA spore germination protein GII89_02130 PF05504 Spore germination B3/ GerAC like, C-terminal GII89_02135 PF03845 Spore germination protein GII89_02140 PF00005 ABC transporter GII89_02145 PF02687 FtsX-like permease family GII89_02145 PF12704 MacB-like periplasmic core domain GII89_02150 PF00486 Transcriptional regulatory protein, C terminal GII89_02150 PF00072 Response regulator receiver domain GII89_02155 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GII89_02155 PF00672 HAMP domain GII89_02155 PF00512 His Kinase A (phospho-acceptor) domain GII89_02160 PF18801 response regulator aspartate phosphatase H, N terminal GII89_02165 PF11131 Rap-phr extracellular signalling GII89_02170 PF09680 Family of unknown function GII89_02175 PF09680 Family of unknown function GII89_02180 PF13840 ACT domain GII89_02180 PF00696 Amino acid kinase family GII89_02185 PF01032 FecCD transport family GII89_02190 PF01032 FecCD transport family GII89_02195 PF00005 ABC transporter GII89_02200 PF01497 Periplasmic binding protein GII89_02205 PF07690 Major Facilitator Superfamily GII89_02210 PF00440 Bacterial regulatory proteins, tetR family GII89_02215 PF00881 Nitroreductase family GII89_02220 PF03992 Antibiotic biosynthesis monooxygenase GII89_02225 PF01022 Bacterial regulatory protein, arsR family GII89_02230 PF00155 Aminotransferase class I and II GII89_02230 PF00392 Bacterial regulatory proteins, gntR family GII89_02235 PF00202 Aminotransferase class-III GII89_02240 PF00171 Aldehyde dehydrogenase family GII89_02245 PF06800 Sugar transport protein GII89_02255 PF07987 Domain of unkown function (DUF1775) GII89_02260 PF05425 Copper resistance protein D GII89_02260 PF13115 YtkA-like GII89_02260 PF04234 CopC domain GII89_02265 PF05573 NosL GII89_02265 PF08220 DeoR-like helix-turn-helix domain GII89_02275 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit GII89_02275 PF02378 Phosphotransferase system, EIIC GII89_02280 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 GII89_02285 PF01232 Mannitol dehydrogenase Rossmann domain GII89_02285 PF08125 Mannitol dehydrogenase C-terminal domain GII89_02290 PF00180 Isocitrate/isopropylmalate dehydrogenase GII89_02295 PF10502 Signal peptidase, peptidase S26 GII89_02300 PF01738 Dienelactone hydrolase family GII89_02305 PF07977 FabA-like domain GII89_02320 PF03746 LamB/YcsF family GII89_02325 PF01566 Natural resistance-associated macrophage protein GII89_02330 PF07286 Protein of unknown function (DUF1445) GII89_02335 PF02682 Carboxyltransferase domain, subdomain C and D GII89_02340 PF02626 Carboxyltransferase domain, subdomain A and B GII89_02345 PF09339 IclR helix-turn-helix domain GII89_02345 PF01614 Bacterial transcriptional regulator GII89_02350 PF13472 GDSL-like Lipase/Acylhydrolase family GII89_02355 PF13129 Protein of unknown function (DUF3953) GII89_02360 PF03992 Antibiotic biosynthesis monooxygenase GII89_02365 PF05223 NTF2-like N-terminal transpeptidase domain GII89_02365 PF00905 Penicillin binding protein transpeptidase domain GII89_02365 PF03717 Penicillin-binding Protein dimerisation domain GII89_02370 PF00248 Aldo/keto reductase family GII89_02375 PF00874 PRD domain GII89_02375 PF05043 Mga helix-turn-helix domain GII89_02375 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit GII89_02375 PF08279 HTH domain GII89_02375 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 GII89_02380 PF13193 AMP-binding enzyme C-terminal domain GII89_02380 PF00501 AMP-binding enzyme GII89_02385 PF13649 Methyltransferase domain GII89_02400 PF13302 Acetyltransferase (GNAT) domain GII89_02405 PF16242 Pyridoxamine 5'-phosphate oxidase like GII89_02410 PF10997 Alternate to MurJ GII89_02415 PF12823 Domain of unknown function (DUF3817) GII89_02420 PF01037 Lrp/AsnC ligand binding domain GII89_02425 PF01131 DNA topoisomerase GII89_02425 PF01751 Toprim domain GII89_02435 PF00990 Diguanylate cyclase, GGDEF domain GII89_02440 PF10096 Uncharacterized protein conserved in bacteria (DUF2334) GII89_02450 PF03170 Bacterial cellulose synthase subunit GII89_02455 PF13520 Amino acid permease GII89_02460 PF00293 NUDIX domain GII89_02465 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain GII89_02465 PF00205 Thiamine pyrophosphate enzyme, central domain GII89_02465 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain GII89_02480 PF01566 Natural resistance-associated macrophage protein GII89_02485 PF04226 Transglycosylase associated protein GII89_02490 PF09954 Uncharacterized protein conserved in bacteria (DUF2188) GII89_02495 PF12787 EcsC protein family GII89_02500 PF00477 Small hydrophilic plant seed protein GII89_02500 PF10685 Stress-induced bacterial acidophilic repeat motif GII89_02505 PF07883 Cupin domain GII89_02510 PF16291 Domain of unknown function (DUF4937 GII89_02515 PF05067 Manganese containing catalase GII89_02520 PF03480 Bacterial extracellular solute-binding protein, family 7 GII89_02525 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GII89_02525 PF17203 Single cache domain 3 GII89_02525 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain GII89_02530 PF00072 Response regulator receiver domain GII89_02530 PF08279 HTH domain GII89_02535 PF00375 Sodium:dicarboxylate symporter family GII89_02540 PF01594 AI-2E family transporter GII89_02545 PF00005 ABC transporter GII89_02560 PF02771 Acyl-CoA dehydrogenase, N-terminal domain GII89_02560 PF08028 Acyl-CoA dehydrogenase, C-terminal domain GII89_02560 PF02770 Acyl-CoA dehydrogenase, middle domain GII89_02565 PF13040 Fur-regulated basic protein B GII89_02575 PF16916 Dimerisation domain of Zinc Transporter GII89_02575 PF01545 Cation efflux family GII89_02580 PF00085 Thioredoxin GII89_02585 PF07478 D-ala D-ala ligase C-terminus GII89_02585 PF01820 D-ala D-ala ligase N-terminus GII89_02590 PF01225 Mur ligase family, catalytic domain GII89_02590 PF08245 Mur ligase middle domain GII89_02590 PF02875 Mur ligase family, glutamate ligase domain GII89_02595 PF00271 Helicase conserved C-terminal domain GII89_02595 PF00270 DEAD/DEAH box helicase GII89_02600 PF03703 Bacterial PH domain GII89_02605 PF03703 Bacterial PH domain GII89_02610 PF01694 Rhomboid family GII89_02615 PF01648 4'-phosphopantetheinyl transferase superfamily GII89_02625 PF01168 Alanine racemase, N-terminal domain GII89_02625 PF00842 Alanine racemase, C-terminal domain GII89_02630 PF01402 Ribbon-helix-helix protein, copG family GII89_02635 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system GII89_02640 PF01740 STAS domain GII89_02640 PF08678 Rsbr N terminal GII89_02645 PF01740 STAS domain GII89_02650 PF13581 Histidine kinase-like ATPase domain GII89_02655 PF08673 Phosphoserine phosphatase RsbU, N-terminal domain GII89_02655 PF07228 Stage II sporulation protein E (SpoIIE) GII89_02660 PF01740 STAS domain GII89_02665 PF13581 Histidine kinase-like ATPase domain GII89_02670 PF04542 Sigma-70 region 2 GII89_02670 PF04545 Sigma-70, region 4 GII89_02670 PF04539 Sigma-70 region 3 GII89_02675 PF07228 Stage II sporulation protein E (SpoIIE) GII89_02690 PF01878 EVE domain GII89_02695 PF01047 MarR family GII89_02700 PF17674 HHH domain GII89_02700 PF00575 S1 RNA binding domain GII89_02700 PF09371 Tex-like protein N-terminal domain GII89_02700 PF16921 Tex protein YqgF-like domain GII89_02710 PF17283 SprT-like zinc ribbon domain GII89_02710 PF10263 SprT-like family GII89_02750 PF14659 Phage integrase, N-terminal SAM-like domain GII89_02750 PF00589 Phage integrase family GII89_02755 PF06114 IrrE N-terminal-like domain GII89_02760 PF01381 Helix-turn-helix GII89_02785 PF06125 Bacterial protein of unknown function (DUF961) GII89_02795 PF18106 Rolling Circle replication initiation protein N-terminal domain GII89_02795 PF02486 Replication initiation factor GII89_02815 PF12642 Conjugative transposon protein TcpC GII89_02825 PF12648 TcpE family GII89_02835 PF08960 Domain of unknown function (DUF1874) GII89_02845 PF00877 NlpC/P60 family GII89_02855 PF14729 Domain of unknown function with cystatin-like fold (DUF4467) GII89_02860 PF13676 TIR domain GII89_02865 PF18801 response regulator aspartate phosphatase H, N terminal GII89_02880 PF00296 Luciferase-like monooxygenase GII89_02885 PF01037 Lrp/AsnC ligand binding domain GII89_02890 PF01037 Lrp/AsnC ligand binding domain GII89_02895 PF00857 Isochorismatase family GII89_02900 PF12706 Beta-lactamase superfamily domain GII89_02905 PF00083 Sugar (and other) transporter GII89_02905 PF07690 Major Facilitator Superfamily GII89_02925 PF01965 DJ-1/PfpI family GII89_02930 PF00313 'Cold-shock' DNA-binding domain GII89_02935 PF02559 CarD-like/TRCF domain GII89_02945 PF12833 Helix-turn-helix domain GII89_02945 PF02311 AraC-like ligand binding domain GII89_02950 PF00892 EamA-like transporter family GII89_02955 PF06445 GyrI-like small molecule binding domain GII89_02955 PF12833 Helix-turn-helix domain GII89_02960 PF00392 Bacterial regulatory proteins, gntR family GII89_02960 PF00155 Aminotransferase class I and II GII89_02965 PF07690 Major Facilitator Superfamily GII89_02975 PF08818 Domain of unknown function (DU1801) GII89_02985 PF00892 EamA-like transporter family GII89_02990 PF00392 Bacterial regulatory proteins, gntR family GII89_02990 PF00155 Aminotransferase class I and II GII89_02995 PF01575 MaoC like domain GII89_03000 PF06821 Serine hydrolase GII89_03005 PF01638 HxlR-like helix-turn-helix GII89_03010 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 GII89_03010 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) GII89_03015 PF01638 HxlR-like helix-turn-helix GII89_03020 PF02525 Flavodoxin-like fold GII89_03025 PF07690 Major Facilitator Superfamily GII89_03030 PF16859 Tetracyclin repressor-like, C-terminal domain GII89_03030 PF00440 Bacterial regulatory proteins, tetR family GII89_03040 PF01022 Bacterial regulatory protein, arsR family GII89_03045 PF02040 Arsenical pump membrane protein GII89_03055 PF12746 GNAT acetyltransferase GII89_03060 PF00892 EamA-like transporter family GII89_03065 PF00155 Aminotransferase class I and II GII89_03065 PF00392 Bacterial regulatory proteins, gntR family GII89_03070 PF01613 Flavin reductase like domain GII89_03080 PF02627 Carboxymuconolactone decarboxylase family GII89_03095 PF07730 Histidine kinase GII89_03095 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GII89_03100 PF00072 Response regulator receiver domain GII89_03100 PF00196 Bacterial regulatory proteins, luxR family GII89_03105 PF03176 MMPL family GII89_03110 PF12697 Alpha/beta hydrolase family GII89_03115 PF04474 Protein of unknown function (DUF554) GII89_03120 PF06445 GyrI-like small molecule binding domain GII89_03120 PF13411 MerR HTH family regulatory protein GII89_03125 PF16916 Dimerisation domain of Zinc Transporter GII89_03125 PF01545 Cation efflux family GII89_03130 PF00881 Nitroreductase family GII89_03135 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily GII89_03140 PF07681 DoxX GII89_03145 PF00085 Thioredoxin GII89_03150 PF10676 Spore germination protein gerPA/gerPF GII89_03155 PF10676 Spore germination protein gerPA/gerPF GII89_03160 PF04239 Protein of unknown function (DUF421) GII89_03165 PF04239 Protein of unknown function (DUF421) GII89_03170 PF00011 Hsp20/alpha crystallin family GII89_03175 PF10676 Spore germination protein gerPA/gerPF GII89_03180 PF10676 Spore germination protein gerPA/gerPF GII89_03185 PF00440 Bacterial regulatory proteins, tetR family GII89_03190 PF13564 DoxX-like family GII89_03195 PF00583 Acetyltransferase (GNAT) family GII89_03205 PF00324 Amino acid permease GII89_03210 PF05163 DinB family GII89_03215 PF01047 MarR family GII89_03220 PF03176 MMPL family GII89_03225 PF00881 Nitroreductase family GII89_03230 PF01047 MarR family GII89_03235 PF07690 Major Facilitator Superfamily GII89_03240 PF01925 Sulfite exporter TauE/SafE GII89_03245 PF00392 Bacterial regulatory proteins, gntR family GII89_03245 PF07729 FCD domain GII89_03250 PF01476 LysM domain GII89_03250 PF00704 Glycosyl hydrolases family 18 GII89_03255 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase GII89_03260 PF08139 Prokaryotic membrane lipoprotein lipid attachment site GII89_03260 PF11611 Domain of unknown function (DUF4352) GII89_03265 PF00245 Alkaline phosphatase GII89_03270 PF08818 Domain of unknown function (DU1801) GII89_03275 PF16302 Domain of unknown function (DUF4944) GII89_03280 PF00583 Acetyltransferase (GNAT) family GII89_03285 PF01966 HD domain GII89_03290 PF07563 Protein of unknown function (DUF1541) GII89_03295 PF07690 Major Facilitator Superfamily GII89_03300 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit GII89_03305 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit GII89_03310 PF02378 Phosphotransferase system, EIIC GII89_03315 PF00232 Glycosyl hydrolase family 1 GII89_03320 PF07702 UTRA domain GII89_03320 PF00392 Bacterial regulatory proteins, gntR family GII89_03325 PF00480 ROK family GII89_03330 PF01238 Phosphomannose isomerase type I GII89_03335 PF02156 Glycosyl hydrolase family 26 GII89_03380 PF02769 AIR synthase related protein, C-terminal domain GII89_03380 PF00586 AIR synthase related protein, N-terminal domain GII89_03385 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE GII89_03390 PF00814 Glycoprotease family GII89_03395 PF00583 Acetyltransferase (GNAT) family GII89_03400 PF00814 Glycoprotease family GII89_03405 PF16326 ABC transporter C-terminal domain GII89_03405 PF12848 ABC transporter GII89_03405 PF00005 ABC transporter GII89_03410 PF01967 MoaC family GII89_03415 PF06971 Putative DNA-binding protein N-terminus GII89_03415 PF02629 CoA binding domain GII89_03420 PF02416 mttA/Hcf106 family GII89_03425 PF00902 Sec-independent protein translocase protein (TatC) GII89_03430 PF14146 Domain of unknown function (DUF4305) GII89_03435 PF02517 CPBP intramembrane metalloprotease GII89_03440 PF00166 Chaperonin 10 Kd subunit GII89_03445 PF00118 TCP-1/cpn60 chaperonin family GII89_03470 PF00145 C-5 cytosine-specific DNA methylase GII89_03475 PF00145 C-5 cytosine-specific DNA methylase GII89_03495 PF07728 AAA domain (dynein-related subfamily) GII89_03500 PF09563 LlaJI restriction endonuclease GII89_03515 PF00931 NB-ARC domain GII89_03515 PF13176 Tetratricopeptide repeat GII89_03520 PF08240 Alcohol dehydrogenase GroES-like domain GII89_03520 PF00107 Zinc-binding dehydrogenase GII89_03530 PF00294 pfkB family carbohydrate kinase GII89_03535 PF04012 PspA/IM30 family GII89_03540 PF08271 TFIIB zinc-binding GII89_03545 PF04536 TPM domain GII89_03550 PF13421 SPFH domain-Band 7 family GII89_03555 PF07885 Ion channel GII89_03560 PF00083 Sugar (and other) transporter GII89_03565 PF00107 Zinc-binding dehydrogenase GII89_03565 PF08240 Alcohol dehydrogenase GroES-like domain GII89_03570 PF03330 Lytic transglycolase GII89_03575 PF07676 WD40-like Beta Propeller Repeat GII89_03585 PF14169 Cold-inducible protein YdjO GII89_03590 PF12697 Alpha/beta hydrolase family GII89_03595 PF13170 Protein of unknown function (DUF4003) GII89_03600 PF00394 Multicopper oxidase GII89_03600 PF07732 Multicopper oxidase GII89_03600 PF07731 Multicopper oxidase GII89_03605 PF00324 Amino acid permease GII89_03615 PF16916 Dimerisation domain of Zinc Transporter GII89_03615 PF01545 Cation efflux family GII89_03620 PF07726 ATPase family associated with various cellular activities (AAA) GII89_03620 PF17863 AAA lid domain GII89_03625 PF01882 Protein of unknown function DUF58 GII89_03630 PF11992 Domain of unknown function (DUF3488) GII89_03630 PF01841 Transglutaminase-like superfamily GII89_03630 PF13559 Domain of unknown function (DUF4129) GII89_03635 PF02540 NAD synthase GII89_03635 PF00958 GMP synthase C terminal domain GII89_03635 PF00117 Glutamine amidotransferase class-I GII89_03640 PF00860 Permease family GII89_03650 PF13076 Fur-regulated basic protein A GII89_03655 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) GII89_03660 PF14044 NETI protein GII89_03665 PF00731 AIR carboxylase GII89_03670 PF02222 ATP-grasp domain GII89_03670 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain GII89_03675 PF10397 Adenylosuccinate lyase C-terminus GII89_03675 PF00206 Lyase GII89_03680 PF01259 SAICAR synthetase GII89_03685 PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase GII89_03695 PF00586 AIR synthase related protein, N-terminal domain GII89_03695 PF02769 AIR synthase related protein, C-terminal domain GII89_03695 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain GII89_03700 PF00156 Phosphoribosyl transferase domain GII89_03705 PF00586 AIR synthase related protein, N-terminal domain GII89_03705 PF02769 AIR synthase related protein, C-terminal domain GII89_03710 PF00551 Formyl transferase GII89_03715 PF02142 MGS-like domain GII89_03715 PF01808 AICARFT/IMPCHase bienzyme GII89_03720 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain GII89_03720 PF02843 Phosphoribosylglycinamide synthetase, C domain GII89_03720 PF02844 Phosphoribosylglycinamide synthetase, N domain GII89_03725 PF01037 Lrp/AsnC ligand binding domain GII89_03730 PF13520 Amino acid permease GII89_03735 PF11127 Protein of unknown function (DUF2892) GII89_03740 PF01979 Amidohydrolase family GII89_03740 PF13382 Adenine deaminase C-terminal domain GII89_03745 PF11258 Protein of unknown function (DUF3048) N-terminal domain GII89_03745 PF17479 Protein of unknown function (DUF3048) C-terminal domain GII89_03750 PF01371 Trp repressor protein GII89_03755 PF01645 Conserved region in glutamate synthase GII89_03760 PF01884 PcrB family GII89_03765 PF13361 UvrD-like helicase C-terminal domain GII89_03765 PF00580 UvrD/REP helicase N-terminal domain GII89_03770 PF00533 BRCA1 C Terminus (BRCT) domain GII89_03770 PF12826 Helix-hairpin-helix motif GII89_03770 PF01653 NAD-dependent DNA ligase adenylation domain GII89_03770 PF03120 NAD-dependent DNA ligase OB-fold domain GII89_03770 PF03119 NAD-dependent DNA ligase C4 zinc finger domain GII89_03775 PF07537 CamS sex pheromone cAM373 precursor GII89_03780 PF01636 Phosphotransferase enzyme family GII89_03785 PF02308 MgtC family GII89_03790 PF00474 Sodium:solute symporter family GII89_03795 PF02686 Glu-tRNAGln amidotransferase C subunit GII89_03800 PF01425 Amidase GII89_03805 PF02637 GatB domain GII89_03805 PF02934 GatB/GatE catalytic domain GII89_03810 PF00440 Bacterial regulatory proteins, tetR family GII89_03815 PF00873 AcrB/AcrD/AcrF family GII89_03820 PF00781 Diacylglycerol kinase catalytic domain GII89_03825 PF01938 TRAM domain GII89_03825 PF05958 tRNA (Uracil-5-)-methyltransferase GII89_03830 PF07508 Recombinase GII89_03830 PF13408 Recombinase zinc beta ribbon domain GII89_03835 PF18010 Cry35Ab1 HTH C-terminal domain GII89_03835 PF00239 Resolvase, N terminal domain GII89_03850 PF10544 T5orf172 domain GII89_03865 PF04634 Protein of unknown function, DUF600 GII89_03870 PF04740 LXG domain of WXG superfamily GII89_03880 PF13176 Tetratricopeptide repeat GII89_03880 PF18801 response regulator aspartate phosphatase H, N terminal GII89_03890 PF01709 Transcriptional regulator GII89_03900 PF00440 Bacterial regulatory proteins, tetR family GII89_03905 PF12680 SnoaL-like domain GII89_03910 PF01370 NAD dependent epimerase/dehydratase family GII89_03915 PF11007 Spore coat associated protein JA (CotJA) GII89_03920 PF12652 CotJB protein GII89_03925 PF05067 Manganese containing catalase GII89_03930 PF00583 Acetyltransferase (GNAT) family GII89_03935 PF14150 YesK-like protein GII89_03940 PF04854 Protein of unknown function, DUF624 GII89_03945 PF02743 Cache domain GII89_03945 PF06580 Histidine kinase GII89_03945 PF00672 HAMP domain GII89_03945 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GII89_03950 PF00072 Response regulator receiver domain GII89_03950 PF12833 Helix-turn-helix domain GII89_03955 PF13416 Bacterial extracellular solute-binding protein GII89_03960 PF00528 Binding-protein-dependent transport system inner membrane component GII89_03965 PF00528 Binding-protein-dependent transport system inner membrane component GII89_03970 PF07470 Glycosyl Hydrolase Family 88 GII89_03975 PF12833 Helix-turn-helix domain GII89_03980 PF13472 GDSL-like Lipase/Acylhydrolase family GII89_03985 PF09224 Domain of unknown function (DUF1961) GII89_03990 PF04854 Protein of unknown function, DUF624 GII89_03995 PF18370 Rhamnogalacturonan I lyases beta-sheet domain GII89_04000 PF01839 FG-GAP repeat GII89_04000 PF18370 Rhamnogalacturonan I lyases beta-sheet domain GII89_04005 PF00657 GDSL-like Lipase/Acylhydrolase GII89_04010 PF02449 Beta-galactosidase GII89_04010 PF08533 Beta-galactosidase C-terminal domain GII89_04010 PF08532 Beta-galactosidase trimerisation domain GII89_04020 PF01547 Bacterial extracellular solute-binding protein GII89_04025 PF00528 Binding-protein-dependent transport system inner membrane component GII89_04030 PF00528 Binding-protein-dependent transport system inner membrane component GII89_04035 PF02056 Family 4 glycosyl hydrolase GII89_04035 PF11975 Family 4 glycosyl hydrolase C-terminal domain GII89_04040 PF04239 Protein of unknown function (DUF421) GII89_04045 PF03992 Antibiotic biosynthesis monooxygenase GII89_04050 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily GII89_04065 PF10055 Uncharacterized small protein (DUF2292) GII89_04070 PF01027 Inhibitor of apoptosis-promoting Bax1 GII89_04075 PF00892 EamA-like transporter family GII89_04080 PF01047 MarR family GII89_04085 PF01494 FAD binding domain GII89_04090 PF13039 Protein of unknown function (DUF3900) GII89_04090 PF13037 Domain of unknown function (DUF3898) GII89_04095 PF00067 Cytochrome P450 GII89_04095 PF00667 FAD binding domain GII89_04095 PF00175 Oxidoreductase NAD-binding domain GII89_04095 PF00258 Flavodoxin GII89_04100 PF00884 Sulfatase GII89_04105 PF00483 Nucleotidyl transferase GII89_04110 PF16363 GDP-mannose 4,6 dehydratase GII89_04115 PF03407 Nucleotide-diphospho-sugar transferase GII89_04120 PF00535 Glycosyl transferase family 2 GII89_04125 PF03407 Nucleotide-diphospho-sugar transferase GII89_04130 PF07690 Major Facilitator Superfamily GII89_04135 PF13419 Haloacid dehalogenase-like hydrolase GII89_04140 PF13520 Amino acid permease GII89_04145 PF00171 Aldehyde dehydrogenase family GII89_04150 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GII89_04155 PF12848 ABC transporter GII89_04155 PF16326 ABC transporter C-terminal domain GII89_04155 PF00005 ABC transporter GII89_04160 PF10787 Uncharacterised protein from bacillus cereus group GII89_04165 PF13411 MerR HTH family regulatory protein GII89_04170 PF07690 Major Facilitator Superfamily GII89_04180 PF12848 ABC transporter GII89_04180 PF00005 ABC transporter GII89_04185 PF00271 Helicase conserved C-terminal domain GII89_04185 PF00270 DEAD/DEAH box helicase GII89_04190 PF00583 Acetyltransferase (GNAT) family GII89_04195 PF16884 N-terminal domain of oxidoreductase GII89_04195 PF00107 Zinc-binding dehydrogenase GII89_04200 PF07690 Major Facilitator Superfamily GII89_04205 PF03781 Sulfatase-modifying factor enzyme 1 GII89_04210 PF00005 ABC transporter GII89_04215 PF01032 FecCD transport family GII89_04220 PF01032 FecCD transport family GII89_04225 PF01497 Periplasmic binding protein GII89_04230 PF11486 Protein of unknown function (DUF3212) GII89_04235 PF11181 Heat induced stress protein YflT GII89_04240 PF00544 Pectate lyase GII89_04245 PF00939 Sodium:sulfate symporter transmembrane region GII89_04250 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain GII89_04250 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GII89_04255 PF08279 HTH domain GII89_04255 PF12431 Transcriptional regulator GII89_04255 PF00072 Response regulator receiver domain GII89_04260 PF03401 Tripartite tricarboxylate transporter family receptor GII89_04265 PF03600 Citrate transporter GII89_04270 PF00753 Metallo-beta-lactamase superfamily GII89_04275 PF02898 Nitric oxide synthase, oxygenase domain GII89_04280 PF00708 Acylphosphatase GII89_04285 PF03475 3-alpha domain GII89_04285 PF03473 MOSC domain GII89_04290 PF11121 Protein of unknown function (DUF2639) GII89_04300 PF11588 Protein of unknown function (DUF3243) GII89_04305 PF00557 Metallopeptidase family M24 GII89_04310 PF00367 phosphotransferase system, EIIB GII89_04310 PF02378 Phosphotransferase system, EIIC GII89_04315 PF00884 Sulfatase GII89_04325 PF09350 Domain of unknown function (DUF1992) GII89_04330 PF01235 Sodium:alanine symporter family GII89_04335 PF03845 Spore germination protein GII89_04345 PF05504 Spore germination B3/ GerAC like, C-terminal GII89_04350 PF03323 Bacillus/Clostridium GerA spore germination protein GII89_04355 PF00367 phosphotransferase system, EIIB GII89_04355 PF02378 Phosphotransferase system, EIIC GII89_04360 PF16657 Maltogenic Amylase, C-terminal domain GII89_04360 PF00128 Alpha amylase, catalytic domain GII89_04365 PF07702 UTRA domain GII89_04365 PF00392 Bacterial regulatory proteins, gntR family GII89_04370 PF00881 Nitroreductase family GII89_04375 PF02872 5'-nucleotidase, C-terminal domain GII89_04375 PF00149 Calcineurin-like phosphoesterase GII89_04380 PF01965 DJ-1/PfpI family GII89_04385 PF07690 Major Facilitator Superfamily GII89_04390 PF06569 Protein of unknown function (DUF1128) GII89_04395 PF01451 Low molecular weight phosphotyrosine protein phosphatase GII89_04405 PF03631 Virulence factor BrkB GII89_04410 PF07690 Major Facilitator Superfamily GII89_04420 PF01699 Sodium/calcium exchanger protein GII89_04425 PF14167 YfkD-like protein GII89_04430 PF00924 Mechanosensitive ion channel GII89_04435 PF08756 YfkB-like domain GII89_04435 PF04055 Radical SAM superfamily GII89_04445 PF01522 Polysaccharide deacetylase GII89_04450 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase GII89_04450 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase GII89_04455 PF01544 CorA-like Mg2+ transporter protein GII89_04460 PF00730 HhH-GPD superfamily base excision DNA repair protein GII89_04465 PF05958 tRNA (Uracil-5-)-methyltransferase GII89_04465 PF01938 TRAM domain GII89_04470 PF14118 YfzA-like protein GII89_04475 PF01207 Dihydrouridine synthase (Dus) GII89_04490 PF00676 Dehydrogenase E1 component GII89_04495 PF02779 Transketolase, pyrimidine binding domain GII89_04495 PF02780 Transketolase, C-terminal domain GII89_04500 PF00364 Biotin-requiring enzyme GII89_04500 PF02817 e3 binding domain GII89_04500 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) GII89_04505 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GII89_04505 PF07992 Pyridine nucleotide-disulphide oxidoreductase GII89_04510 PF01590 GAF domain GII89_04510 PF02954 Bacterial regulatory protein, Fis family GII89_04510 PF00158 Sigma-54 interaction domain GII89_04515 PF08141 Small acid-soluble spore protein H family GII89_04520 PF02694 Uncharacterised BCR, YnfA/UPF0060 family GII89_04525 PF17353 Family of unknown function (DUF5381) GII89_04530 PF17353 Family of unknown function (DUF5381) GII89_04545 PF06013 Proteins of 100 residues with WXG GII89_04550 PF11975 Family 4 glycosyl hydrolase C-terminal domain GII89_04550 PF02056 Family 4 glycosyl hydrolase GII89_04555 PF01380 SIS domain GII89_04555 PF01418 Helix-turn-helix domain, rpiR family GII89_04560 PF02378 Phosphotransferase system, EIIC GII89_04560 PF00367 phosphotransferase system, EIIB GII89_04565 PF00005 ABC transporter GII89_04565 PF00664 ABC transporter transmembrane region GII89_04570 PF00664 ABC transporter transmembrane region GII89_04570 PF00005 ABC transporter GII89_04575 PF07681 DoxX GII89_04580 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily GII89_04585 PF12833 Helix-turn-helix domain GII89_04585 PF02311 AraC-like ligand binding domain GII89_04590 PF00083 Sugar (and other) transporter GII89_04595 PF01261 Xylose isomerase-like TIM barrel GII89_04600 PF02894 Oxidoreductase family, C-terminal alpha/beta domain GII89_04600 PF01408 Oxidoreductase family, NAD-binding Rossmann fold GII89_04605 PF07730 Histidine kinase GII89_04610 PF00196 Bacterial regulatory proteins, luxR family GII89_04610 PF00072 Response regulator receiver domain GII89_04615 PF00005 ABC transporter GII89_04630 PF10400 Virulence activator alpha C-term GII89_04630 PF03551 Transcriptional regulator PadR-like family GII89_04635 PF01674 Lipase (class 2) GII89_04640 PF01757 Acyltransferase family GII89_04645 PF00440 Bacterial regulatory proteins, tetR family GII89_04645 PF17922 Tetracyclin repressor-like, C-terminal domain GII89_04650 PF07690 Major Facilitator Superfamily GII89_04655 PF12867 DinB superfamily GII89_04660 PF07690 Major Facilitator Superfamily GII89_04665 PF01047 MarR family GII89_04670 PF03706 Lysylphosphatidylglycerol synthase TM region GII89_04670 PF09924 Uncharacterised conserved protein (DUF2156) GII89_04675 PF01497 Periplasmic binding protein GII89_04680 PF01032 FecCD transport family GII89_04685 PF01032 FecCD transport family GII89_04690 PF02567 Phenazine biosynthesis-like protein GII89_04695 PF00881 Nitroreductase family GII89_04700 PF14151 YfhD-like protein GII89_04705 PF14152 YfhE-like protein GII89_04710 PF01370 NAD dependent epimerase/dehydratase family GII89_04710 PF08338 Domain of unknown function (DUF1731) GII89_04715 PF02631 RecX family GII89_04720 PF08838 Protein of unknown function (DUF1811) GII89_04725 PF07690 Major Facilitator Superfamily GII89_04730 PF08176 Small acid-soluble spore protein K family GII89_04735 PF14043 WVELL protein GII89_04740 PF08239 Bacterial SH3 domain GII89_04745 PF13630 SdpI/YhfL protein family GII89_04750 PF00561 alpha/beta hydrolase fold GII89_04755 PF00535 Glycosyl transferase family 2 GII89_04760 PF09586 Bacterial membrane protein YfhO GII89_04765 PF04307 LexA-binding, inner membrane-associated putative hydrolase GII89_04770 PF14815 NUDIX domain GII89_04770 PF00730 HhH-GPD superfamily base excision DNA repair protein GII89_04785 PF04259 Small, acid-soluble spore protein, gamma-type GII89_04790 PF14182 YgaB-like protein GII89_04795 PF04167 Protein of unknown function (DUF402) GII89_04800 PF00664 ABC transporter transmembrane region GII89_04800 PF00005 ABC transporter GII89_04805 PF06081 Aromatic acid exporter family member 1 GII89_04810 PF00202 Aminotransferase class-III GII89_04815 PF00578 AhpC/TSA family GII89_04820 PF01475 Ferric uptake regulator family GII89_04825 PF11023 Zinc-ribbon containing domain GII89_04830 PF18576 Helix-turn-helix domain GII89_04830 PF14540 Nucleotidyltransferase-like GII89_04930 PF07070 SpoOM protein GII89_04940 PF07875 Coat F domain GII89_04945 PF03575 Peptidase family S51 GII89_04950 PF01964 Radical SAM ThiC family GII89_04950 PF13667 ThiC-associated domain GII89_04955 PF08031 Berberine and berberine like GII89_04955 PF01565 FAD binding domain GII89_04960 PF13040 Fur-regulated basic protein B GII89_04965 PF00199 Catalase GII89_04965 PF06628 Catalase-related immune-responsive GII89_04970 PF00005 ABC transporter GII89_04975 PF09084 NMT1/THI5 like GII89_04980 PF00528 Binding-protein-dependent transport system inner membrane component GII89_04985 PF00296 Luciferase-like monooxygenase GII89_04995 PF00253 Ribosomal protein S14p/S29e GII89_05005 PF01381 Helix-turn-helix GII89_05020 PF08331 Domain of unknown function (DUF1730) GII89_05025 PF12671 Putative amidase domain GII89_05030 PF00588 SpoU rRNA Methylase family GII89_05035 PF13171 Protein of unknown function (DUF4004) GII89_05040 PF04519 Polymer-forming cytoskeletal GII89_05050 PF08298 PrkA AAA domain GII89_05050 PF06798 PrkA serine protein kinase C-terminal domain GII89_05055 PF04285 Protein of unknown function (DUF444) GII89_05060 PF01047 MarR family GII89_05070 PF07690 Major Facilitator Superfamily GII89_05075 PF03358 NADPH-dependent FMN reductase GII89_05095 PF00392 Bacterial regulatory proteins, gntR family GII89_05100 PF00005 ABC transporter GII89_05105 PF00005 ABC transporter GII89_05110 PF12679 ABC-2 family transporter protein GII89_05115 PF00313 'Cold-shock' DNA-binding domain GII89_05120 PF03180 NLPA lipoprotein GII89_05125 PF00990 Diguanylate cyclase, GGDEF domain GII89_05125 PF07694 5TMR of 5TMR-LYT GII89_05130 PF00375 Sodium:dicarboxylate symporter family GII89_05140 PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) GII89_05150 PF07875 Coat F domain GII89_05155 PF00565 Staphylococcal nuclease homologue GII89_05155 PF02872 5'-nucleotidase, C-terminal domain GII89_05155 PF00149 Calcineurin-like phosphoesterase GII89_05155 PF00746 LPXTG cell wall anchor motif GII89_05160 PF04203 Sortase domain GII89_05165 PF01479 S4 domain GII89_05165 PF00849 RNA pseudouridylate synthase GII89_05170 PF17326 Family of unknown function (DUF5365) GII89_05175 PF00571 CBS domain GII89_05180 PF13419 Haloacid dehalogenase-like hydrolase GII89_05185 PF00795 Carbon-nitrogen hydrolase GII89_05185 PF00583 Acetyltransferase (GNAT) family GII89_05190 PF00202 Aminotransferase class-III GII89_05195 PF04309 Glycerol-3-phosphate responsive antiterminator GII89_05200 PF00230 Major intrinsic protein GII89_05205 PF02782 FGGY family of carbohydrate kinases, C-terminal domain GII89_05205 PF00370 FGGY family of carbohydrate kinases, N-terminal domain GII89_05210 PF01266 FAD dependent oxidoreductase GII89_05210 PF16901 C-terminal domain of alpha-glycerophosphate oxidase GII89_05215 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II GII89_05215 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III GII89_05215 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I GII89_05215 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain GII89_05220 PF13185 GAF domain GII89_05220 PF07730 Histidine kinase GII89_05225 PF00196 Bacterial regulatory proteins, luxR family GII89_05225 PF00072 Response regulator receiver domain GII89_05230 PF03358 NADPH-dependent FMN reductase GII89_05235 PF14148 YhdB-like protein GII89_05240 PF13028 Protein of unknown function (DUF3889) GII89_05245 PF00877 NlpC/P60 family GII89_05245 PF01476 LysM domain GII89_05250 PF02082 Transcriptional regulator GII89_05255 PF05552 Conserved TM helix GII89_05260 PF04293 SpoVR like protein GII89_05265 PF00245 Alkaline phosphatase GII89_05270 PF01476 LysM domain GII89_05270 PF00877 NlpC/P60 family GII89_05275 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GII89_05275 PF03466 LysR substrate binding domain GII89_05280 PF00285 Citrate synthase, C-terminal domain GII89_05290 PF13520 Amino acid permease GII89_05295 PF00209 Sodium:neurotransmitter symporter family GII89_05300 PF00392 Bacterial regulatory proteins, gntR family GII89_05300 PF00155 Aminotransferase class I and II GII89_05305 PF00583 Acetyltransferase (GNAT) family GII89_05310 PF17453 Sigma-M inhibitor GII89_05315 PF13800 Sigma factor regulator N-terminal GII89_05315 PF13791 Sigma factor regulator C-terminal GII89_05320 PF08281 Sigma-70, region 4 GII89_05320 PF04542 Sigma-70 region 2 GII89_05325 PF00248 Aldo/keto reductase family GII89_05330 PF01553 Acyltransferase GII89_05335 PF03471 Transporter associated domain GII89_05335 PF00571 CBS domain GII89_05335 PF01595 Cyclin M transmembrane N-terminal domain GII89_05340 PF13411 MerR HTH family regulatory protein GII89_05345 PF00155 Aminotransferase class I and II GII89_05350 PF00571 CBS domain GII89_05350 PF01595 Cyclin M transmembrane N-terminal domain GII89_05350 PF03471 Transporter associated domain GII89_05355 PF02537 CrcB-like protein, Camphor Resistance (CrcB) GII89_05360 PF02537 CrcB-like protein, Camphor Resistance (CrcB) GII89_05365 PF03009 Glycerophosphoryl diester phosphodiesterase family GII89_05370 PF17444 Uncharacterized YhdX-like GII89_05375 PF00924 Mechanosensitive ion channel GII89_05380 PF02146 Sir2 family GII89_05385 PF01522 Polysaccharide deacetylase GII89_05390 PF01063 Amino-transferase class IV GII89_05395 PF03553 Na+/H+ antiporter family GII89_05400 PF00582 Universal stress protein family GII89_05410 PF00005 ABC transporter GII89_05410 PF00664 ABC transporter transmembrane region GII89_05415 PF00005 ABC transporter GII89_05415 PF00664 ABC transporter transmembrane region GII89_05420 PF13460 NAD(P)H-binding GII89_05430 PF00269 Small, acid-soluble spore proteins, alpha/beta type GII89_05435 PF17277 Family of unknown function (DUF5342) GII89_05440 PF14398 YheC/D like ATP-grasp GII89_05445 PF14398 YheC/D like ATP-grasp GII89_05450 PF04286 Protein of unknown function (DUF445) GII89_05455 PF06133 Control of competence regulator ComK, YlbF/YmcA GII89_05460 PF08713 DNA alkylation repair enzyme GII89_05470 PF04055 Radical SAM superfamily GII89_05475 PF00999 Sodium/hydrogen exchanger family GII89_05480 PF02080 TrkA-C domain GII89_05490 PF00378 Enoyl-CoA hydratase/isomerase GII89_05495 PF14120 YhzD-like protein GII89_05500 PF00005 ABC transporter GII89_05500 PF13732 Domain of unknown function (DUF4162) GII89_05510 PF00149 Calcineurin-like phosphoesterase GII89_05515 PF13514 AAA domain GII89_05520 PF01966 HD domain GII89_05525 PF14147 Sporulation protein YhaL GII89_05535 PF09680 Family of unknown function GII89_05540 PF09680 Family of unknown function GII89_05550 PF11667 Putative zincin peptidase GII89_05555 PF08963 Protein of unknown function (DUF1878) GII89_05560 PF01047 MarR family GII89_05565 PF12732 YtxH-like protein GII89_05575 PF17099 Tryptophan transporter TrpP GII89_05580 PF00266 Aminotransferase class-V GII89_05585 PF01230 HIT domain GII89_05590 PF00005 ABC transporter GII89_05595 PF05975 Bacterial ABC transporter protein EcsB GII89_05600 PF12787 EcsC protein family GII89_05605 PF01546 Peptidase family M20/M25/M40 GII89_05605 PF07687 Peptidase dimerisation domain GII89_05620 PF03992 Antibiotic biosynthesis monooxygenase GII89_05625 PF00912 Transglycosylase GII89_05625 PF00905 Penicillin binding protein transpeptidase domain GII89_05630 PF01208 Uroporphyrinogen decarboxylase (URO-D) GII89_05645 PF17932 Tetracyclin repressor-like, C-terminal domain GII89_05645 PF00440 Bacterial regulatory proteins, tetR family GII89_05655 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal GII89_05655 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III GII89_05660 PF10086 YhfC intramembrane metalloprotease GII89_05670 PF05343 M42 glutamyl aminopeptidase GII89_05675 PF04266 ASCH domain GII89_05680 PF00375 Sodium:dicarboxylate symporter family GII89_05685 PF14149 YhfH-like protein GII89_05690 PF12706 Beta-lactamase superfamily domain GII89_05695 PF03099 Biotin/lipoate A/B protein ligase family GII89_05695 PF10437 Bacterial lipoate protein ligase C-terminus GII89_05700 PF13460 NAD(P)H-binding GII89_05705 PF13193 AMP-binding enzyme C-terminal domain GII89_05705 PF00501 AMP-binding enzyme GII89_05715 PF16491 CAAX prenyl protease N-terminal, five membrane helices GII89_05715 PF01435 Peptidase family M48 GII89_05720 PF00082 Subtilase family GII89_05720 PF05922 Peptidase inhibitor I9 GII89_05725 PF00583 Acetyltransferase (GNAT) family GII89_05730 PF00107 Zinc-binding dehydrogenase GII89_05730 PF08240 Alcohol dehydrogenase GroES-like domain GII89_05735 PF01497 Periplasmic binding protein GII89_05740 PF00300 Histidine phosphatase superfamily (branch 1) GII89_05745 PF02803 Thiolase, C-terminal domain GII89_05745 PF00108 Thiolase, N-terminal domain GII89_05750 PF13193 AMP-binding enzyme C-terminal domain GII89_05750 PF00501 AMP-binding enzyme GII89_05755 PF02632 BioY family GII89_05760 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GII89_05765 PF00355 Rieske [2Fe-2S] domain GII89_05765 PF01266 FAD dependent oxidoreductase GII89_05775 PF08858 IDEAL domain GII89_05780 PF06338 ComK protein GII89_05790 PF05901 Excalibur calcium-binding domain GII89_05795 PF00474 Sodium:solute symporter family GII89_05800 PF11755 Protein of unknown function (DUF3311) GII89_05810 PF09335 SNARE associated Golgi protein GII89_05815 PF10502 Signal peptidase, peptidase S26 GII89_05820 PF01494 FAD binding domain GII89_05825 PF01047 MarR family GII89_05830 PF07690 Major Facilitator Superfamily GII89_05835 PF01408 Oxidoreductase family, NAD-binding Rossmann fold GII89_05835 PF02894 Oxidoreductase family, C-terminal alpha/beta domain GII89_05840 PF05116 Sucrose-6F-phosphate phosphohydrolase GII89_05845 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family GII89_05850 PF00356 Bacterial regulatory proteins, lacI family GII89_05855 PF05145 Transition state regulatory protein AbrB GII89_05860 PF07690 Major Facilitator Superfamily GII89_05865 PF12793 Sugar transport-related sRNA regulator N-term GII89_05865 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle GII89_05870 PF03860 Domain of Unknown Function (DUF326) GII89_05875 PF02915 Rubrerythrin GII89_05880 PF13361 UvrD-like helicase C-terminal domain GII89_05880 PF12705 PD-(D/E)XK nuclease superfamily GII89_05885 PF13361 UvrD-like helicase C-terminal domain GII89_05885 PF00580 UvrD/REP helicase N-terminal domain GII89_05885 PF12705 PD-(D/E)XK nuclease superfamily GII89_05890 PF12320 Type 5 capsule protein repressor C-terminal domain GII89_05890 PF00149 Calcineurin-like phosphoesterase GII89_05895 PF13476 AAA domain GII89_05905 PF10676 Spore germination protein gerPA/gerPF GII89_05910 PF10970 Spore germination protein GerPE GII89_05920 PF10737 Spore germination protein GerPC GII89_05925 PF10803 Spore germination GerPB GII89_05930 PF10676 Spore germination protein gerPA/gerPF GII89_05935 PF09388 Spo0E like sporulation regulatory protein GII89_05940 PF08757 CotH kinase protein GII89_05945 PF01557 Fumarylacetoacetate (FAA) hydrolase family GII89_05950 PF07457 Protein of unknown function (DUF1516) GII89_05955 PF00082 Subtilase family GII89_05955 PF17936 Bacterial Ig domain GII89_05960 PF10949 Protein of unknown function (DUF2777) GII89_05965 PF13537 Glutamine amidotransferase domain GII89_05965 PF00733 Asparagine synthase GII89_05970 PF05163 DinB family GII89_05980 PF01554 MatE GII89_05985 PF02311 AraC-like ligand binding domain GII89_05985 PF12833 Helix-turn-helix domain GII89_05990 PF00356 Bacterial regulatory proteins, lacI family GII89_05995 PF01408 Oxidoreductase family, NAD-binding Rossmann fold GII89_05995 PF02894 Oxidoreductase family, C-terminal alpha/beta domain GII89_06000 PF05163 DinB family GII89_06005 PF01810 LysE type translocator GII89_06010 PF00392 Bacterial regulatory proteins, gntR family GII89_06010 PF00155 Aminotransferase class I and II GII89_06015 PF13599 Pentapeptide repeats (9 copies) GII89_06020 PF00561 alpha/beta hydrolase fold GII89_06020 PF08386 TAP-like protein GII89_06030 PF14306 PUA-like domain GII89_06030 PF01747 ATP-sulfurylase GII89_06035 PF01507 Phosphoadenosine phosphosulfate reductase family GII89_06040 PF04029 2-phosphosulpholactate phosphatase GII89_06045 PF02679 (2R)-phospho-3-sulfolactate synthase (ComA) GII89_06050 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 GII89_06055 PF13378 Enolase C-terminal domain-like GII89_06055 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain GII89_06060 PF07690 Major Facilitator Superfamily GII89_06065 PF13673 Acetyltransferase (GNAT) domain GII89_06065 PF18014 Acetyltransferase (GNAT) domain GII89_06070 PF13673 Acetyltransferase (GNAT) domain GII89_06075 PF02574 Homocysteine S-methyltransferase GII89_06075 PF02219 Methylenetetrahydrofolate reductase GII89_06080 PF04461 Protein of unknown function (DUF520) GII89_06085 PF13509 S1 domain GII89_06085 PF17783 CvfB-like winged helix domain GII89_06100 PF17418 Sporulation delaying protein SdpA GII89_06105 PF03551 Transcriptional regulator PadR-like family GII89_06115 PF12650 Domain of unknown function (DUF3784) GII89_06120 PF03413 Peptidase propeptide and YPEB domain GII89_06120 PF07504 Fungalysin/Thermolysin Propeptide Motif GII89_06120 PF01447 Thermolysin metallopeptidase, catalytic domain GII89_06120 PF02868 Thermolysin metallopeptidase, alpha-helical domain GII89_06125 PF02645 Uncharacterised protein, DegV family COG1307 GII89_06130 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) GII89_06130 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 GII89_06135 PF12690 Intracellular proteinase inhibitor GII89_06140 PF12758 Protein of unknown function (DUF3813) GII89_06150 PF00326 Prolyl oligopeptidase family GII89_06155 PF01883 Iron-sulfur cluster assembly protein GII89_06165 PF01565 FAD binding domain GII89_06170 PF07690 Major Facilitator Superfamily GII89_06175 PF01118 Semialdehyde dehydrogenase, NAD binding domain GII89_06175 PF02774 Semialdehyde dehydrogenase, dimerisation domain GII89_06180 PF01960 ArgJ family GII89_06185 PF00696 Amino acid kinase family GII89_06190 PF00202 Aminotransferase class-III GII89_06195 PF00117 Glutamine amidotransferase class-I GII89_06195 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain GII89_06200 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain GII89_06200 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain GII89_06205 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain GII89_06205 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain GII89_06210 PF14168 YjzC-like protein GII89_06215 PF11151 Protein of unknown function (DUF2929) GII89_06230 PF02608 ABC transporter substrate-binding protein PnrA-like GII89_06235 PF10815 ComZ GII89_06245 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III GII89_06245 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal GII89_06250 PF00109 Beta-ketoacyl synthase, N-terminal domain GII89_06250 PF02801 Beta-ketoacyl synthase, C-terminal domain GII89_06255 PF10026 Predicted Zn-dependent protease (DUF2268) GII89_06260 PF00005 ABC transporter GII89_06260 PF08352 Oligopeptide/dipeptide transporter, C-terminal region GII89_06265 PF00005 ABC transporter GII89_06265 PF08352 Oligopeptide/dipeptide transporter, C-terminal region GII89_06270 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle GII89_06275 PF00528 Binding-protein-dependent transport system inner membrane component GII89_06280 PF12911 N-terminal TM domain of oligopeptide transport permease C GII89_06280 PF00528 Binding-protein-dependent transport system inner membrane component GII89_06285 PF12227 Protein of unknown function (DUF3603) GII89_06290 PF00579 tRNA synthetases class I (W and Y) GII89_06295 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle GII89_06300 PF00528 Binding-protein-dependent transport system inner membrane component GII89_06305 PF00528 Binding-protein-dependent transport system inner membrane component GII89_06305 PF12911 N-terminal TM domain of oligopeptide transport permease C GII89_06310 PF00005 ABC transporter GII89_06310 PF08352 Oligopeptide/dipeptide transporter, C-terminal region GII89_06315 PF00005 ABC transporter GII89_06315 PF08352 Oligopeptide/dipeptide transporter, C-terminal region GII89_06320 PF07690 Major Facilitator Superfamily GII89_06325 PF13508 Acetyltransferase (GNAT) domain GII89_06330 PF03960 ArsC family GII89_06335 PF03741 Integral membrane protein TerC family GII89_06345 PF05389 Negative regulator of genetic competence (MecA) GII89_06355 PF06054 Competence protein CoiA-like family GII89_06360 PF08439 Oligopeptidase F GII89_06360 PF01432 Peptidase family M3 GII89_06375 PF01152 Bacterial-like globin GII89_06380 PF01464 Transglycosylase SLT domain GII89_06385 PF01928 CYTH domain GII89_06395 PF04607 Region found in RelA / SpoT proteins GII89_06400 PF01513 ATP-NAD kinase GII89_06405 PF00849 RNA pseudouridylate synthase GII89_06410 PF00149 Calcineurin-like phosphoesterase GII89_06415 PF02254 TrkA-N domain GII89_06415 PF02080 TrkA-C domain GII89_06415 PF00999 Sodium/hydrogen exchanger family GII89_06420 PF03070 TENA/THI-4/PQQC family GII89_06425 PF02581 Thiamine monophosphate synthase GII89_06430 PF01266 FAD dependent oxidoreductase GII89_06435 PF02597 ThiS family GII89_06440 PF05690 Thiazole biosynthesis protein ThiG GII89_06445 PF00899 ThiF family GII89_06450 PF08543 Phosphomethylpyrimidine kinase GII89_06460 PF14153 Spore coat protein CotO GII89_06465 PF10612 Spore coat protein Z GII89_06470 PF10612 Spore coat protein Z GII89_06475 PF07552 Spore Coat Protein X and V domain GII89_06485 PF07552 Spore Coat Protein X and V domain GII89_06490 PF07098 Protein of unknown function (DUF1360) GII89_06505 PF14069 Stage VI sporulation protein F GII89_06510 PF13361 UvrD-like helicase C-terminal domain GII89_06510 PF00580 UvrD/REP helicase N-terminal domain GII89_06520 PF13673 Acetyltransferase (GNAT) domain GII89_06530 PF00756 Putative esterase GII89_06535 PF01053 Cys/Met metabolism PLP-dependent enzyme GII89_06540 PF01053 Cys/Met metabolism PLP-dependent enzyme GII89_06545 PF13302 Acetyltransferase (GNAT) domain GII89_06550 PF05684 Protein of unknown function (DUF819) GII89_06560 PF12671 Putative amidase domain GII89_06590 PF09639 YjcQ protein GII89_06595 PF10668 Phage terminase small subunit GII89_06600 PF03992 Antibiotic biosynthesis monooxygenase GII89_06610 PF02368 Bacterial Ig-like domain (group 2) GII89_06615 PF08279 HTH domain GII89_06615 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 GII89_06615 PF00874 PRD domain GII89_06615 PF05043 Mga helix-turn-helix domain GII89_06620 PF02378 Phosphotransferase system, EIIC GII89_06620 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 GII89_06620 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit GII89_06625 PF01238 Phosphomannose isomerase type I GII89_06630 PF11208 Protein of unknown function (DUF2992) GII89_06635 PF13302 Acetyltransferase (GNAT) domain GII89_06645 PF04073 Aminoacyl-tRNA editing domain GII89_06650 PF13783 Domain of unknown function (DUF4177) GII89_06655 PF14154 Domain of unknown function (DUF4306) GII89_06660 PF01040 UbiA prenyltransferase family GII89_06670 PF01522 Polysaccharide deacetylase GII89_06670 PF13739 Deacetylase PdaC GII89_06670 PF11738 Protein of unknown function (DUF3298) GII89_06675 PF10901 Protein of unknown function (DUF2690) GII89_06680 PF14070 Putative motility protein GII89_06685 PF10026 Predicted Zn-dependent protease (DUF2268) GII89_06690 PF10990 Protein of unknown function (DUF2809) GII89_06695 PF14172 Domain of unknown function (DUF4309) GII89_06700 PF04879 Molybdopterin oxidoreductase Fe4S4 domain GII89_06700 PF01568 Molydopterin dinucleotide binding domain GII89_06700 PF12838 4Fe-4S dicluster domain GII89_06700 PF00384 Molybdopterin oxidoreductase GII89_06700 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region GII89_06705 PF07849 Protein of unknown function (DUF1641) GII89_06710 PF11611 Domain of unknown function (DUF4352) GII89_06715 PF00293 NUDIX domain GII89_06725 PF00067 Cytochrome P450 GII89_06730 PF04101 Glycosyltransferase family 28 C-terminal domain GII89_06740 PF02602 Uroporphyrinogen-III synthase HemD GII89_06745 PF03649 Uncharacterised protein family (UPF0014) GII89_06750 PF00005 ABC transporter GII89_06755 PF13536 Putative multidrug resistance efflux transporter GII89_06765 PF07849 Protein of unknown function (DUF1641) GII89_06770 PF07992 Pyridine nucleotide-disulphide oxidoreductase GII89_06775 PF02614 Glucuronate isomerase GII89_06785 PF02615 Malate/L-lactate dehydrogenase GII89_06790 PF08240 Alcohol dehydrogenase GroES-like domain GII89_06790 PF00107 Zinc-binding dehydrogenase GII89_06795 PF03786 D-mannonate dehydratase (UxuA) GII89_06800 PF00106 short chain dehydrogenase GII89_06805 PF07690 Major Facilitator Superfamily GII89_06810 PF00356 Bacterial regulatory proteins, lacI family GII89_06815 PF08125 Mannitol dehydrogenase C-terminal domain GII89_06815 PF01232 Mannitol dehydrogenase Rossmann domain GII89_06820 PF08666 SAF domain GII89_06820 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus GII89_06825 PF01925 Sulfite exporter TauE/SafE GII89_06830 PF05163 DinB family GII89_06835 PF00004 ATPase family associated with various cellular activities (AAA) GII89_06840 PF18801 response regulator aspartate phosphatase H, N terminal GII89_06850 PF03795 YCII-related domain GII89_06855 PF01471 Putative peptidoglycan binding domain GII89_06855 PF01476 LysM domain GII89_06855 PF01510 N-acetylmuramoyl-L-alanine amidase GII89_06860 PF08000 Bacterial PH domain GII89_06865 PF05908 Poly-gamma-glutamate hydrolase GII89_06870 PF05067 Manganese containing catalase GII89_06875 PF06114 IrrE N-terminal-like domain GII89_06880 PF01381 Helix-turn-helix GII89_06895 PF01695 IstB-like ATP binding protein GII89_06915 PF08281 Sigma-70, region 4 GII89_06920 PF10668 Phage terminase small subunit GII89_06920 PF03592 Terminase small subunit GII89_06925 PF04466 Phage terminase large subunit GII89_06925 PF17288 Terminase RNAseH like domain GII89_06930 PF04860 Phage portal protein GII89_06935 PF14550 Putative phage serine protease XkdF GII89_06940 PF05065 Phage capsid family GII89_06945 PF11436 Protein of unknown function (DUF3199) GII89_06950 PF12206 Domain of unknown function (DUF3599) GII89_06955 PF04883 Bacteriophage HK97-gp10, putative tail-component GII89_06970 PF04984 Phage tail sheath protein subtilisin-like domain GII89_06970 PF17482 Phage tail sheath C-terminal domain GII89_06970 PF17481 Phage tail sheath protein beta-sandwich domain GII89_06975 PF09393 Phage tail tube protein GII89_06980 PF08890 Phage XkdN-like tail assembly chaperone protein, TAC GII89_06990 PF01464 Transglycosylase SLT domain GII89_06995 PF01476 LysM domain GII89_07005 PF10844 Protein of unknown function (DUF2577) GII89_07010 PF10934 Protein of unknown function (DUF2634) GII89_07015 PF04865 Baseplate J-like protein GII89_07020 PF10076 Uncharacterised protein conserved in bacteria (DUF2313) GII89_07035 PF09636 XkdW protein GII89_07040 PF09693 Phage uncharacterised protein (Phage_XkdX) GII89_07050 PF10779 Haemolysin XhlA GII89_07055 PF04688 SPP1 phage holin GII89_07060 PF01476 LysM domain GII89_07060 PF01510 N-acetylmuramoyl-L-alanine amidase GII89_07060 PF01471 Putative peptidoglycan binding domain GII89_07070 PF14185 Antitoxin SpoIISB, type II toxin-antitoxin system GII89_07075 PF14171 Toxin SpoIISA, type II toxin-antitoxin system GII89_07080 PF01384 Phosphate transporter family GII89_07085 PF01865 Protein of unknown function DUF47 GII89_07090 PF13520 Amino acid permease GII89_07095 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily GII89_07105 PF13231 Dolichyl-phosphate-mannose-protein mannosyltransferase GII89_07110 PF00535 Glycosyl transferase family 2 GII89_07115 PF13180 PDZ domain GII89_07120 PF14748 Pyrroline-5-carboxylate reductase dimerisation GII89_07120 PF03807 NADP oxidoreductase coenzyme F420-dependent GII89_07125 PF04951 D-aminopeptidase GII89_07130 PF00528 Binding-protein-dependent transport system inner membrane component GII89_07135 PF12911 N-terminal TM domain of oligopeptide transport permease C GII89_07135 PF00528 Binding-protein-dependent transport system inner membrane component GII89_07140 PF00005 ABC transporter GII89_07140 PF08352 Oligopeptide/dipeptide transporter, C-terminal region GII89_07145 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle GII89_07150 PF17676 LD-carboxypeptidase C-terminal domain GII89_07150 PF02016 LD-carboxypeptidase N-terminal domain GII89_07155 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain GII89_07155 PF13378 Enolase C-terminal domain-like GII89_07160 PF00877 NlpC/P60 family GII89_07165 PF08352 Oligopeptide/dipeptide transporter, C-terminal region GII89_07165 PF00005 ABC transporter GII89_07170 PF10282 Lactonase, 7-bladed beta-propeller GII89_07180 PF03061 Thioesterase superfamily GII89_07185 PF00042 Globin GII89_07185 PF00175 Oxidoreductase NAD-binding domain GII89_07185 PF00970 Oxidoreductase FAD-binding domain GII89_07195 PF04239 Protein of unknown function (DUF421) GII89_07200 PF12867 DinB superfamily GII89_07205 PF13302 Acetyltransferase (GNAT) domain GII89_07210 PF00893 Small Multidrug Resistance protein GII89_07215 PF00893 Small Multidrug Resistance protein GII89_07220 PF00551 Formyl transferase GII89_07220 PF01842 ACT domain GII89_07225 PF01472 PUA domain GII89_07225 PF00696 Amino acid kinase family GII89_07230 PF00171 Aldehyde dehydrogenase family GII89_07235 PF02566 OsmC-like protein GII89_07240 PF01047 MarR family GII89_07245 PF02566 OsmC-like protein GII89_07255 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region GII89_07260 PF01717 Cobalamin-independent synthase, Catalytic domain GII89_07260 PF08267 Cobalamin-independent synthase, N-terminal domain GII89_07265 PF00082 Subtilase family GII89_07270 PF01740 STAS domain GII89_07275 PF02361 Cobalt transport protein GII89_07280 PF00005 ABC transporter GII89_07285 PF09819 ABC-type cobalt transport system, permease component GII89_07290 PF07615 YKOF-related Family GII89_07295 PF00486 Transcriptional regulatory protein, C terminal GII89_07295 PF00072 Response regulator receiver domain GII89_07300 PF00512 His Kinase A (phospho-acceptor) domain GII89_07300 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GII89_07300 PF00672 HAMP domain GII89_07305 PF03413 Peptidase propeptide and YPEB domain GII89_07310 PF03413 Peptidase propeptide and YPEB domain GII89_07315 PF11132 Transcriptional regulator protein (SplA) GII89_07320 PF03448 MgtE intracellular N domain GII89_07320 PF01769 Divalent cation transporter GII89_07320 PF00571 CBS domain GII89_07325 PF13411 MerR HTH family regulatory protein GII89_07340 PF01047 MarR family GII89_07345 PF06925 Monogalactosyldiacylglycerol (MGDG) synthase GII89_07355 PF00149 Calcineurin-like phosphoesterase GII89_07365 PF00535 Glycosyl transferase family 2 GII89_07370 PF01068 ATP dependent DNA ligase domain GII89_07375 PF02735 Ku70/Ku80 beta-barrel domain GII89_07380 PF00990 Diguanylate cyclase, GGDEF domain GII89_07380 PF00563 EAL domain GII89_07380 PF03707 Bacterial signalling protein N terminal repeat GII89_07385 PF09335 SNARE associated Golgi protein GII89_07390 PF03741 Integral membrane protein TerC family GII89_07395 PF04542 Sigma-70 region 2 GII89_07400 PF12791 Anti-sigma factor N-terminus GII89_07405 PF00269 Small, acid-soluble spore proteins, alpha/beta type GII89_07410 PF08876 Domain of unknown function (DUF1836) GII89_07415 PF01435 Peptidase family M48 GII89_07420 PF02386 Cation transport protein GII89_07435 PF01757 Acyltransferase family GII89_07440 PF00989 PAS fold GII89_07440 PF00512 His Kinase A (phospho-acceptor) domain GII89_07440 PF13426 PAS domain GII89_07440 PF13188 PAS domain GII89_07440 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GII89_07445 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain GII89_07445 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain GII89_07455 PF01008 Initiation factor 2 subunit family GII89_07460 PF01636 Phosphotransferase enzyme family GII89_07465 PF00795 Carbon-nitrogen hydrolase GII89_07470 PF00155 Aminotransferase class I and II GII89_07475 PF02788 Ribulose bisphosphate carboxylase large chain, N-terminal domain GII89_07475 PF00016 Ribulose bisphosphate carboxylase large chain, catalytic domain GII89_07485 PF00596 Class II Aldolase and Adducin N-terminal domain GII89_07490 PF03079 ARD/ARD' family GII89_07495 PF06803 Protein of unknown function (DUF1232) GII89_07500 PF09388 Spo0E like sporulation regulatory protein GII89_07510 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GII89_07510 PF02743 Cache domain GII89_07510 PF00512 His Kinase A (phospho-acceptor) domain GII89_07515 PF01047 MarR family GII89_07520 PF13677 Membrane MotB of proton-channel complex MotA/MotB GII89_07520 PF00691 OmpA family GII89_07525 PF01618 MotA/TolQ/ExbB proton channel family GII89_07530 PF00004 ATPase family associated with various cellular activities (AAA) GII89_07530 PF07724 AAA domain (Cdc48 subfamily) GII89_07530 PF17871 AAA lid domain GII89_07530 PF10431 C-terminal, D2-small domain, of ClpB protein GII89_07540 PF06508 Queuosine biosynthesis protein QueC GII89_07545 PF01242 6-pyruvoyl tetrahydropterin synthase GII89_07550 PF04055 Radical SAM superfamily GII89_07555 PF14489 QueF-like protein GII89_07560 PF01638 HxlR-like helix-turn-helix GII89_07570 PF01476 LysM domain GII89_07575 PF01476 LysM domain GII89_07585 PF11514 Protein of unknown function (DUF3219) GII89_07590 PF09953 Uncharacterized protein conserved in bacteria (DUF2187) GII89_07600 PF07486 Cell Wall Hydrolase GII89_07605 PF01943 Polysaccharide biosynthesis protein GII89_07610 PF00578 AhpC/TSA family GII89_07625 PF01321 Creatinase/Prolidase N-terminal domain GII89_07625 PF00557 Metallopeptidase family M24 GII89_07630 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family GII89_07630 PF00356 Bacterial regulatory proteins, lacI family GII89_07635 PF03123 CAT RNA binding domain GII89_07635 PF00874 PRD domain GII89_07640 PF02378 Phosphotransferase system, EIIC GII89_07640 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 GII89_07640 PF00367 phosphotransferase system, EIIB GII89_07645 PF00381 PTS HPr component phosphorylation site GII89_07650 PF00391 PEP-utilising enzyme, mobile domain GII89_07650 PF02896 PEP-utilising enzyme, TIM barrel domain GII89_07650 PF05524 PEP-utilising enzyme, N-terminal GII89_07655 PF11132 Transcriptional regulator protein (SplA) GII89_07665 PF00583 Acetyltransferase (GNAT) family GII89_07670 PF02743 Cache domain GII89_07670 PF00672 HAMP domain GII89_07670 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GII89_07675 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase GII89_07675 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase GII89_07680 PF00188 Cysteine-rich secretory protein family GII89_07685 PF03717 Penicillin-binding Protein dimerisation domain GII89_07685 PF00905 Penicillin binding protein transpeptidase domain GII89_07690 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GII89_07690 PF00512 His Kinase A (phospho-acceptor) domain GII89_07690 PF00989 PAS fold GII89_07690 PF08447 PAS fold GII89_07695 PF00155 Aminotransferase class I and II GII89_07705 PF00072 Response regulator receiver domain GII89_07705 PF01584 CheW-like domain GII89_07710 PF14177 YkyB-like protein GII89_07715 PF07690 Major Facilitator Superfamily GII89_07720 PF01476 LysM domain GII89_07720 PF03734 L,D-transpeptidase catalytic domain GII89_07725 PF10518 TAT (twin-arginine translocation) pathway signal sequence GII89_07725 PF00149 Calcineurin-like phosphoesterase GII89_07735 PF01471 Putative peptidoglycan binding domain GII89_07735 PF08924 Domain of unknown function (DUF1906) GII89_07750 PF00563 EAL domain GII89_07750 PF10388 EAL-domain associated signalling protein domain GII89_07755 PF08796 Protein of unknown function (DUF1797) GII89_07760 PF04308 Ribonuclease H-like GII89_07765 PF14156 Antirepressor AbbA GII89_07775 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GII89_07775 PF03466 LysR substrate binding domain GII89_07780 PF00258 Flavodoxin GII89_07790 PF00258 Flavodoxin GII89_07795 PF00132 Bacterial transferase hexapeptide (six repeats) GII89_07795 PF08503 Tetrahydrodipicolinate succinyltransferase N-terminal GII89_07795 PF14602 Hexapeptide repeat of succinyl-transferase GII89_07800 PF07687 Peptidase dimerisation domain GII89_07800 PF01546 Peptidase family M20/M25/M40 GII89_07805 PF03698 Uncharacterised protein family (UPF0180) GII89_07810 PF00924 Mechanosensitive ion channel GII89_07815 PF00578 AhpC/TSA family GII89_07815 PF10417 C-terminal domain of 1-Cys peroxiredoxin GII89_07820 PF00578 AhpC/TSA family GII89_07835 PF12804 MobA-like NTP transferase domain GII89_07840 PF00899 ThiF family GII89_07845 PF00994 Probable molybdopterin binding domain GII89_07845 PF03454 MoeA C-terminal region (domain IV) GII89_07845 PF03453 MoeA N-terminal region (domain I and II) GII89_07850 PF03205 Molybdopterin guanine dinucleotide synthesis protein B GII89_07855 PF02391 MoaE protein GII89_07860 PF02597 ThiS family GII89_07865 PF00005 ABC transporter GII89_07865 PF00664 ABC transporter transmembrane region GII89_07870 PF00005 ABC transporter GII89_07870 PF00664 ABC transporter transmembrane region GII89_07875 PF04893 Yip1 domain GII89_07880 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion GII89_07885 PF00005 ABC transporter GII89_07890 PF02687 FtsX-like permease family GII89_07890 PF12704 MacB-like periplasmic core domain GII89_07895 PF00455 DeoR C terminal sensor domain GII89_07895 PF08220 DeoR-like helix-turn-helix domain GII89_07900 PF00294 pfkB family carbohydrate kinase GII89_07905 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 GII89_07905 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit GII89_07910 PF10502 Signal peptidase, peptidase S26 GII89_07920 PF12848 ABC transporter GII89_07920 PF00005 ABC transporter GII89_07925 PF08546 Ketopantoate reductase PanE/ApbA C terminal GII89_07925 PF02558 Ketopantoate reductase PanE/ApbA GII89_07930 PF02073 Thermophilic metalloprotease (M29) GII89_07935 PF17447 Uncharacterized YkpC-like GII89_07945 PF18277 AbrB C-terminal domain GII89_07945 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin GII89_07950 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GII89_07950 PF00989 PAS fold GII89_07950 PF00512 His Kinase A (phospho-acceptor) domain GII89_07955 PF06094 Gamma-glutamyl cyclotransferase, AIG2-like GII89_07960 PF02254 TrkA-N domain GII89_07960 PF02080 TrkA-C domain GII89_07965 PF01979 Amidohydrolase family GII89_07965 PF13382 Adenine deaminase C-terminal domain GII89_07970 PF00753 Metallo-beta-lactamase superfamily GII89_07970 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain GII89_07970 PF17770 Ribonuclease J C-terminal domain GII89_07985 PF01327 Polypeptide deformylase GII89_07995 PF10368 Putative cell-wall binding lipoprotein GII89_08000 PF00676 Dehydrogenase E1 component GII89_08005 PF02780 Transketolase, C-terminal domain GII89_08005 PF02779 Transketolase, pyrimidine binding domain GII89_08010 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) GII89_08010 PF00364 Biotin-requiring enzyme GII89_08010 PF02817 e3 binding domain GII89_08015 PF07992 Pyridine nucleotide-disulphide oxidoreductase GII89_08015 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GII89_08025 PF13790 SR1 protein GII89_08030 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain GII89_08030 PF01276 Orn/Lys/Arg decarboxylase, major domain GII89_08035 PF05256 Uncharacterised protein family (UPF0223) GII89_08040 PF06335 Protein of unknown function (DUF1054) GII89_08050 PF00459 Inositol monophosphatase family GII89_08055 PF00583 Acetyltransferase (GNAT) family GII89_08060 PF04072 Leucine carboxyl methyltransferase GII89_08065 PF02868 Thermolysin metallopeptidase, alpha-helical domain GII89_08065 PF03413 Peptidase propeptide and YPEB domain GII89_08065 PF07504 Fungalysin/Thermolysin Propeptide Motif GII89_08065 PF01447 Thermolysin metallopeptidase, catalytic domain GII89_08080 PF08281 Sigma-70, region 4 GII89_08080 PF04542 Sigma-70 region 2 GII89_08085 PF13490 Putative zinc-finger GII89_08095 PF17259 Family of unknown function (DUF5325) GII89_08105 PF14036 YlaH-like protein GII89_08110 PF09963 Uncharacterized protein conserved in bacteria (DUF2197) GII89_08115 PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) GII89_08120 PF02562 PhoH-like protein GII89_08120 PF13638 PIN domain GII89_08130 PF04960 Glutaminase GII89_08135 PF07408 Protein of unknown function (DUF1507) GII89_08140 PF01098 Cell cycle protein GII89_08145 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain GII89_08145 PF02436 Conserved carboxylase domain GII89_08145 PF00364 Biotin-requiring enzyme GII89_08145 PF00682 HMGL-like GII89_08145 PF00289 Biotin carboxylase, N-terminal domain GII89_08145 PF02785 Biotin carboxylase C-terminal domain GII89_08150 PF02628 Cytochrome oxidase assembly protein GII89_08155 PF01040 UbiA prenyltransferase family GII89_08160 PF00116 Cytochrome C oxidase subunit II, periplasmic domain GII89_08160 PF02790 Cytochrome C oxidase subunit II, transmembrane domain GII89_08160 PF00034 Cytochrome c GII89_08165 PF00115 Cytochrome C and Quinol oxidase polypeptide I GII89_08170 PF00510 Cytochrome c oxidase subunit III GII89_08175 PF03626 Prokaryotic Cytochrome C oxidase subunit IV GII89_08180 PF09678 Cytochrome c oxidase caa3 assembly factor (Caa3_CtaG) GII89_08185 PF08868 YugN-like family GII89_08190 PF00571 CBS domain GII89_08195 PF00188 Cysteine-rich secretory protein family GII89_08195 PF14504 CAP-associated N-terminal GII89_08200 PF14071 Putative coat protein GII89_08205 PF14003 YlbE-like protein GII89_08210 PF06133 Control of competence regulator ComK, YlbF/YmcA GII89_08215 PF09902 Uncharacterized protein conserved in bacteria (DUF2129) GII89_08225 PF01467 Cytidylyltransferase-like GII89_08230 PF07670 Nucleoside recognition GII89_08235 PF01734 Patatin-like phospholipase GII89_08240 PF13180 PDZ domain GII89_08240 PF05362 Lon protease (S16) C-terminal proteolytic domain GII89_08245 PF05636 HIGH Nucleotidyl Transferase GII89_08255 PF02620 Large ribosomal RNA subunit accumulation protein YceD GII89_08260 PF01783 Ribosomal L32p protein family GII89_08270 PF00583 Acetyltransferase (GNAT) family GII89_08275 PF02558 Ketopantoate reductase PanE/ApbA GII89_08275 PF08546 Ketopantoate reductase PanE/ApbA C terminal GII89_08280 PF10079 Bacillithiol biosynthesis BshC GII89_08285 PF02381 MraZ protein, putative antitoxin-like GII89_08290 PF01795 MraW methylase family GII89_08305 PF00905 Penicillin binding protein transpeptidase domain GII89_08305 PF03717 Penicillin-binding Protein dimerisation domain GII89_08305 PF03793 PASTA domain GII89_08310 PF02875 Mur ligase family, glutamate ligase domain GII89_08310 PF01225 Mur ligase family, catalytic domain GII89_08310 PF08245 Mur ligase middle domain GII89_08315 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 GII89_08315 PF00953 Glycosyl transferase family 4 GII89_08320 PF08245 Mur ligase middle domain GII89_08320 PF02875 Mur ligase family, glutamate ligase domain GII89_08325 PF01098 Cell cycle protein GII89_08330 PF03033 Glycosyltransferase family 28 N-terminal domain GII89_08330 PF04101 Glycosyltransferase family 28 C-terminal domain GII89_08335 PF01565 FAD binding domain GII89_08335 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain GII89_08340 PF08478 POTRA domain, FtsQ-type GII89_08345 PF05949 Bacterial protein of unknown function (DUF881) GII89_08350 PF05949 Bacterial protein of unknown function (DUF881) GII89_08355 PF06947 Protein of unknown function (DUF1290) GII89_08360 PF02491 SHS2 domain inserted in FTSA GII89_08365 PF12327 FtsZ family, C-terminal domain GII89_08365 PF00091 Tubulin/FtsZ family, GTPase domain GII89_08370 PF05922 Peptidase inhibitor I9 GII89_08370 PF00082 Subtilase family GII89_08375 PF03419 Sporulation factor SpoIIGA GII89_08380 PF04542 Sigma-70 region 2 GII89_08380 PF04545 Sigma-70, region 4 GII89_08385 PF04542 Sigma-70 region 2 GII89_08385 PF04539 Sigma-70 region 3 GII89_08385 PF04545 Sigma-70, region 4 GII89_08390 PF00005 ABC transporter GII89_08395 PF07687 Peptidase dimerisation domain GII89_08395 PF01546 Peptidase family M20/M25/M40 GII89_08400 PF05239 PRC-barrel domain GII89_08410 PF01168 Alanine racemase, N-terminal domain GII89_08415 PF04472 Cell division protein SepF GII89_08420 PF02325 YGGT family GII89_08425 PF01479 S4 domain GII89_08425 PF17774 Putative RNA-binding domain in YlmH GII89_08430 PF05103 DivIVA protein GII89_08435 PF00133 tRNA synthetases class I (I, L, M and V) GII89_08435 PF08264 Anticodon-binding domain of tRNA GII89_08440 PF01258 Prokaryotic dksA/traR C4-type zinc finger GII89_08445 PF01252 Signal peptidase (SPase) II GII89_08450 PF01479 S4 domain GII89_08450 PF00849 RNA pseudouridylate synthase GII89_08455 PF00156 Phosphoribosyl transferase domain GII89_08460 PF00860 Permease family GII89_08465 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain GII89_08465 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain GII89_08470 PF01979 Amidohydrolase family GII89_08475 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain GII89_08475 PF00117 Glutamine amidotransferase class-I GII89_08480 PF02142 MGS-like domain GII89_08480 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain GII89_08480 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain GII89_08485 PF00175 Oxidoreductase NAD-binding domain GII89_08485 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B GII89_08490 PF01180 Dihydroorotate dehydrogenase GII89_08495 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family GII89_08500 PF00156 Phosphoribosyl transferase domain GII89_08505 PF01507 Phosphoadenosine phosphosulfate reductase family GII89_08510 PF01384 Phosphate transporter family GII89_08515 PF01747 ATP-sulfurylase GII89_08515 PF14306 PUA-like domain GII89_08525 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases GII89_08530 PF01903 CbiX GII89_08545 PF00689 Cation transporting ATPase, C-terminus GII89_08545 PF00690 Cation transporter/ATPase, N-terminus GII89_08550 PF08340 Domain of unknown function (DUF1732) GII89_08550 PF03755 YicC-like family, N-terminal region GII89_08555 PF04025 Domain of unknown function (DUF370) GII89_08560 PF00625 Guanylate kinase GII89_08565 PF01192 RNA polymerase Rpb6 GII89_08570 PF04127 DNA / pantothenate metabolism flavoprotein GII89_08570 PF02441 Flavoprotein GII89_08575 PF00271 Helicase conserved C-terminal domain GII89_08575 PF17764 3′ DNA-binding domain (3′BD) GII89_08575 PF18074 Primosomal protein N C-terminal domain GII89_08575 PF18319 PriA DNA helicase Cys-rich region (CRR) domain GII89_08575 PF04851 Type III restriction enzyme, res subunit GII89_08580 PF01327 Polypeptide deformylase GII89_08585 PF00551 Formyl transferase GII89_08585 PF02911 Formyl transferase, C-terminal domain GII89_08590 PF01189 16S rRNA methyltransferase RsmB/F GII89_08590 PF01029 NusB family GII89_08595 PF04055 Radical SAM superfamily GII89_08605 PF03793 PASTA domain GII89_08605 PF00069 Protein kinase domain GII89_08610 PF03193 RsgA GTPase GII89_08610 PF16745 RsgA N-terminal domain GII89_08615 PF00834 Ribulose-phosphate 3 epimerase family GII89_08620 PF04265 Thiamin pyrophosphokinase, vitamin B1 binding domain GII89_08620 PF04263 Thiamin pyrophosphokinase, catalytic domain GII89_08625 PF08183 Stage V sporulation protein family GII89_08630 PF00830 Ribosomal L28 family GII89_08635 PF03780 Asp23 family, cell envelope-related function GII89_08640 PF13684 Dihydroxyacetone kinase family GII89_08640 PF02734 DAK2 domain GII89_08645 PF01842 ACT domain GII89_08645 PF03315 Serine dehydratase beta chain GII89_08650 PF03313 Serine dehydratase alpha chain GII89_08655 PF00270 DEAD/DEAH box helicase GII89_08655 PF00271 Helicase conserved C-terminal domain GII89_08655 PF17191 RecG wedge domain GII89_08660 PF03061 Thioesterase superfamily GII89_08665 PF02504 Fatty acid synthesis protein GII89_08670 PF00698 Acyl transferase domain GII89_08680 PF00550 Phosphopantetheine attachment site GII89_08685 PF14622 Ribonuclease-III-like GII89_08685 PF00035 Double-stranded RNA binding motif GII89_08690 PF06470 SMC proteins Flexible Hinge Domain GII89_08690 PF02463 RecF/RecN/SMC N terminal domain GII89_08695 PF02881 SRP54-type protein, helical bundle domain GII89_08695 PF00448 SRP54-type protein, GTPase domain GII89_08700 PF02369 Bacterial Ig-like domain (group 1) GII89_08705 PF04297 Putative helix-turn-helix protein, YlxM / p13 like GII89_08710 PF02978 Signal peptide binding domain GII89_08710 PF02881 SRP54-type protein, helical bundle domain GII89_08710 PF00448 SRP54-type protein, GTPase domain GII89_08715 PF00886 Ribosomal protein S16 GII89_08725 PF11068 YlqD protein GII89_08730 PF01782 RimM N-terminal domain GII89_08730 PF05239 PRC-barrel domain GII89_08735 PF01746 tRNA (Guanine-1)-methyltransferase GII89_08740 PF01245 Ribosomal protein L19 GII89_08745 PF01926 50S ribosome-binding GTPase GII89_08750 PF01351 Ribonuclease HII GII89_08760 PF01312 FlhB HrpN YscU SpaS Family GII89_08765 PF08442 ATP-grasp domain GII89_08765 PF00549 CoA-ligase GII89_08770 PF00549 CoA-ligase GII89_08770 PF02629 CoA binding domain GII89_08775 PF02481 DNA recombination-mediator protein A GII89_08780 PF01751 Toprim domain GII89_08780 PF01131 DNA topoisomerase GII89_08780 PF01396 Topoisomerase DNA binding C4 zinc finger GII89_08785 PF01134 Glucose inhibited division protein A GII89_08790 PF00589 Phage integrase family GII89_08790 PF02899 Phage integrase, N-terminal SAM-like domain GII89_08795 PF00227 Proteasome subunit GII89_08800 PF07724 AAA domain (Cdc48 subfamily) GII89_08800 PF00004 ATPase family associated with various cellular activities (AAA) GII89_08800 PF10431 C-terminal, D2-small domain, of ClpB protein GII89_08805 PF08222 CodY helix-turn-helix domain GII89_08805 PF06018 CodY GAF-like domain GII89_08810 PF00460 Flagella basal body rod protein GII89_08815 PF00460 Flagella basal body rod protein GII89_08815 PF06429 Flagellar basal body rod FlgEFG protein C-terminal GII89_08820 PF02049 Flagellar hook-basal body complex protein FliE GII89_08825 PF01514 Secretory protein of YscJ/FliF family GII89_08825 PF08345 Flagellar M-ring protein C-terminal GII89_08830 PF14842 FliG N-terminal domain GII89_08830 PF14841 FliG middle domain GII89_08830 PF01706 FliG C-terminal domain GII89_08835 PF02108 Flagellar assembly protein FliH GII89_08840 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain GII89_08840 PF18269 T3SS EscN ATPase C-terminal domain GII89_08840 PF02874 ATP synthase alpha/beta family, beta-barrel domain GII89_08845 PF02050 Flagellar FliJ protein GII89_08850 PF03448 MgtE intracellular N domain GII89_08855 PF02120 Flagellar hook-length control protein FliK GII89_08860 PF03963 Flagellar hook capping protein - N-terminal region GII89_08865 PF06429 Flagellar basal body rod FlgEFG protein C-terminal GII89_08865 PF00460 Flagella basal body rod protein GII89_08870 PF06289 Flagellar and Swarming motility proteins GII89_08875 PF03748 Flagellar basal body-associated protein FliL GII89_08880 PF02154 Flagellar motor switch protein FliM GII89_08880 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term GII89_08885 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term GII89_08885 PF04509 CheC-like family GII89_08890 PF00072 Response regulator receiver domain GII89_08895 PF04347 Flagellar biosynthesis protein, FliO GII89_08900 PF00813 FliP family GII89_08905 PF01313 Bacterial export proteins, family 3 GII89_08910 PF01311 Bacterial export proteins, family 1 GII89_08915 PF01312 FlhB HrpN YscU SpaS Family GII89_08920 PF00771 FHIPEP family GII89_08925 PF00448 SRP54-type protein, GTPase domain GII89_08930 PF10609 NUBPL iron-transfer P-loop NTPase GII89_08935 PF01339 CheB methylesterase GII89_08935 PF00072 Response regulator receiver domain GII89_08940 PF01584 CheW-like domain GII89_08940 PF02895 Signal transducing histidine kinase, homodimeric domain GII89_08940 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GII89_08940 PF01627 Hpt domain GII89_08940 PF07194 P2 response regulator binding domain GII89_08945 PF01584 CheW-like domain GII89_08950 PF04509 CheC-like family GII89_08955 PF03975 CheD chemotactic sensory transduction GII89_08960 PF04545 Sigma-70, region 4 GII89_08960 PF04539 Sigma-70 region 3 GII89_08960 PF04542 Sigma-70 region 2 GII89_08970 PF00318 Ribosomal protein S2 GII89_08975 PF00889 Elongation factor TS GII89_08980 PF00696 Amino acid kinase family GII89_08985 PF01765 Ribosome recycling factor GII89_08990 PF01255 Putative undecaprenyl diphosphate synthase GII89_09000 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain GII89_09000 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase GII89_09000 PF13288 DXP reductoisomerase C-terminal domain GII89_09005 PF02163 Peptidase family M50 GII89_09005 PF17820 PDZ domain GII89_09010 PF03129 Anticodon binding domain GII89_09010 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) GII89_09010 PF04073 Aminoacyl-tRNA editing domain GII89_09015 PF07733 Bacterial DNA polymerase III alpha NTPase domain GII89_09015 PF17657 Bacterial DNA polymerase III alpha subunit finger domain GII89_09015 PF11490 DNA polymerase III polC-type N-terminus II GII89_09015 PF00929 Exonuclease GII89_09015 PF02811 PHP domain GII89_09015 PF14579 Helix-hairpin-helix motif GII89_09015 PF14480 DNA polymerase III polC-type N-terminus I GII89_09020 PF17384 RimP C-terminal SH3 domain GII89_09020 PF02576 RimP N-terminal domain GII89_09025 PF13184 NusA-like KH domain GII89_09025 PF08529 NusA N-terminal domain GII89_09025 PF00575 S1 RNA binding domain GII89_09030 PF04296 Protein of unknown function (DUF448) GII89_09035 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family GII89_09040 PF11987 Translation-initiation factor 2 GII89_09040 PF00009 Elongation factor Tu GTP binding domain GII89_09040 PF04760 Translation initiation factor IF-2, N-terminal region GII89_09045 PF04456 Protein of unknown function (DUF503) GII89_09050 PF02033 Ribosome-binding factor A GII89_09055 PF01509 TruB family pseudouridylate synthase (N terminal domain) GII89_09055 PF16198 tRNA pseudouridylate synthase B C-terminal domain GII89_09060 PF06574 FAD synthetase GII89_09060 PF01687 Riboflavin kinase GII89_09065 PF00312 Ribosomal protein S15 GII89_09070 PF01138 3' exoribonuclease family, domain 1 GII89_09070 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain GII89_09070 PF03725 3' exoribonuclease family, domain 2 GII89_09070 PF00013 KH domain GII89_09070 PF00575 S1 RNA binding domain GII89_09075 PF01522 Polysaccharide deacetylase GII89_09080 PF05193 Peptidase M16 inactive domain GII89_09080 PF00675 Insulinase (Peptidase family M16) GII89_09085 PF05239 PRC-barrel domain GII89_09090 PF16924 Dipicolinate synthase subunit A N-terminal domain GII89_09090 PF01262 Alanine dehydrogenase/PNT, C-terminal domain GII89_09095 PF02441 Flavoprotein GII89_09100 PF02774 Semialdehyde dehydrogenase, dimerisation domain GII89_09100 PF01118 Semialdehyde dehydrogenase, NAD binding domain GII89_09105 PF00696 Amino acid kinase family GII89_09105 PF13840 ACT domain GII89_09110 PF00701 Dihydrodipicolinate synthetase family GII89_09115 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain GII89_09115 PF17770 Ribonuclease J C-terminal domain GII89_09115 PF00753 Metallo-beta-lactamase superfamily GII89_09120 PF00574 Clp protease GII89_09125 PF14035 YlzJ-like protein GII89_09130 PF01580 FtsK/SpoIIIE family GII89_09130 PF09397 Ftsk gamma domain GII89_09130 PF17854 FtsK alpha domain GII89_09135 PF07702 UTRA domain GII89_09135 PF00392 Bacterial regulatory proteins, gntR family GII89_09140 PF07690 Major Facilitator Superfamily GII89_09145 PF05193 Peptidase M16 inactive domain GII89_09150 PF00675 Insulinase (Peptidase family M16) GII89_09150 PF05193 Peptidase M16 inactive domain GII89_09160 PF11588 Protein of unknown function (DUF3243) GII89_09165 PF11868 Protein of unknown function (DUF3388) GII89_09170 PF13464 Domain of unknown function (DUF4115) GII89_09175 PF01066 CDP-alcohol phosphatidyltransferase GII89_09180 PF00994 Probable molybdopterin binding domain GII89_09180 PF02464 Competence-damaged protein GII89_09180 PF18146 Damage-inducible protein CinA KH domain GII89_09185 PF00154 recA bacterial DNA recombination protein GII89_09190 PF00144 Beta-lactamase GII89_09195 PF01966 HD domain GII89_09195 PF12072 Domain of unknown function (DUF3552) GII89_09195 PF00013 KH domain GII89_09200 PF13277 YmdB-like protein GII89_09205 PF04232 Stage V sporulation protein S (SpoVS) GII89_09210 PF08240 Alcohol dehydrogenase GroES-like domain GII89_09210 PF00107 Zinc-binding dehydrogenase GII89_09215 PF00155 Aminotransferase class I and II GII89_09220 PF04055 Radical SAM superfamily GII89_09220 PF01938 TRAM domain GII89_09220 PF00919 Uncharacterized protein family UPF0004 GII89_09225 PF06133 Control of competence regulator ComK, YlbF/YmcA GII89_09230 PF10628 Outer spore coat protein E (CotE) GII89_09235 PF00488 MutS domain V GII89_09235 PF05190 MutS family domain IV GII89_09235 PF05192 MutS domain III GII89_09235 PF05188 MutS domain II GII89_09235 PF01624 MutS domain I GII89_09240 PF01119 DNA mismatch repair protein, C-terminal domain GII89_09240 PF08676 MutL C terminal dimerisation domain GII89_09245 PF14184 Regulatory protein YrvL GII89_09255 PF00440 Bacterial regulatory proteins, tetR family GII89_09255 PF13977 BetI-type transcriptional repressor, C-terminal GII89_09260 PF00753 Metallo-beta-lactamase superfamily GII89_09270 PF00698 Acyl transferase domain GII89_09275 PF00698 Acyl transferase domain GII89_09280 PF00698 Acyl transferase domain GII89_09280 PF03060 Nitronate monooxygenase GII89_09285 PF00550 Phosphopantetheine attachment site GII89_09290 PF02801 Beta-ketoacyl synthase, C-terminal domain GII89_09290 PF00109 Beta-ketoacyl synthase, N-terminal domain GII89_09295 PF01154 Hydroxymethylglutaryl-coenzyme A synthase N terminal GII89_09295 PF08540 Hydroxymethylglutaryl-coenzyme A synthase C terminal GII89_09300 PF00378 Enoyl-CoA hydratase/isomerase GII89_09305 PF00378 Enoyl-CoA hydratase/isomerase GII89_09310 PF08659 KR domain GII89_09310 PF14765 Polyketide synthase dehydratase GII89_09310 PF02801 Beta-ketoacyl synthase, C-terminal domain GII89_09310 PF00501 AMP-binding enzyme GII89_09310 PF13193 AMP-binding enzyme C-terminal domain GII89_09310 PF00668 Condensation domain GII89_09310 PF00109 Beta-ketoacyl synthase, N-terminal domain GII89_09310 PF00550 Phosphopantetheine attachment site GII89_09310 PF16197 Ketoacyl-synthetase C-terminal extension GII89_09315 PF02801 Beta-ketoacyl synthase, C-terminal domain GII89_09315 PF16197 Ketoacyl-synthetase C-terminal extension GII89_09315 PF00109 Beta-ketoacyl synthase, N-terminal domain GII89_09315 PF08659 KR domain GII89_09315 PF00550 Phosphopantetheine attachment site GII89_09315 PF14765 Polyketide synthase dehydratase GII89_09320 PF00109 Beta-ketoacyl synthase, N-terminal domain GII89_09320 PF02801 Beta-ketoacyl synthase, C-terminal domain GII89_09320 PF08659 KR domain GII89_09320 PF08242 Methyltransferase domain GII89_09320 PF00550 Phosphopantetheine attachment site GII89_09320 PF14765 Polyketide synthase dehydratase GII89_09320 PF16197 Ketoacyl-synthetase C-terminal extension GII89_09325 PF08659 KR domain GII89_09325 PF00501 AMP-binding enzyme GII89_09325 PF13193 AMP-binding enzyme C-terminal domain GII89_09325 PF16197 Ketoacyl-synthetase C-terminal extension GII89_09325 PF00109 Beta-ketoacyl synthase, N-terminal domain GII89_09325 PF02801 Beta-ketoacyl synthase, C-terminal domain GII89_09325 PF00550 Phosphopantetheine attachment site GII89_09325 PF14765 Polyketide synthase dehydratase GII89_09325 PF00668 Condensation domain GII89_09330 PF16197 Ketoacyl-synthetase C-terminal extension GII89_09330 PF02801 Beta-ketoacyl synthase, C-terminal domain GII89_09330 PF08242 Methyltransferase domain GII89_09330 PF00975 Thioesterase domain GII89_09330 PF14765 Polyketide synthase dehydratase GII89_09330 PF00109 Beta-ketoacyl synthase, N-terminal domain GII89_09330 PF00550 Phosphopantetheine attachment site GII89_09335 PF00067 Cytochrome P450 GII89_09350 PF00082 Subtilase family GII89_09355 PF05908 Poly-gamma-glutamate hydrolase GII89_09360 PF02566 OsmC-like protein GII89_09365 PF00893 Small Multidrug Resistance protein GII89_09370 PF00893 Small Multidrug Resistance protein GII89_09380 PF12788 YmaF family GII89_09390 PF17209 Hfq protein GII89_09395 PF14157 YmzC-like protein GII89_09405 PF07972 NrdI Flavodoxin like GII89_09410 PF02867 Ribonucleotide reductase, barrel domain GII89_09410 PF00317 Ribonucleotide reductase, all-alpha domain GII89_09410 PF08343 Ribonucleotide reductase N-terminal GII89_09415 PF00268 Ribonucleotide reductase, small chain GII89_09425 PF01520 N-acetylmuramoyl-L-alanine amidase GII89_09425 PF05036 Sporulation related domain GII89_09430 PF17866 AAA lid domain GII89_09430 PF00004 ATPase family associated with various cellular activities (AAA) GII89_09435 PF13167 GTP-binding GTPase N-terminal GII89_09435 PF01926 50S ribosome-binding GTPase GII89_09435 PF16360 GTP-binding GTPase Middle Region GII89_09440 PF06838 Methionine gamma-lyase GII89_09445 PF13411 MerR HTH family regulatory protein GII89_09450 PF00120 Glutamine synthetase, catalytic domain GII89_09450 PF03951 Glutamine synthetase, beta-Grasp domain GII89_09480 PF13302 Acetyltransferase (GNAT) domain GII89_09490 PF13021 Domain of unknown function (DUF3885) GII89_09520 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain GII89_09520 PF04616 Glycosyl hydrolases family 43 GII89_09525 PF00480 ROK family GII89_09530 PF01261 Xylose isomerase-like TIM barrel GII89_09535 PF02782 FGGY family of carbohydrate kinases, C-terminal domain GII89_09535 PF00370 FGGY family of carbohydrate kinases, N-terminal domain GII89_09545 PF00565 Staphylococcal nuclease homologue GII89_09550 PF00083 Sugar (and other) transporter GII89_09555 PF01168 Alanine racemase, N-terminal domain GII89_09555 PF00842 Alanine racemase, C-terminal domain GII89_09560 PF10903 Protein of unknown function (DUF2691) GII89_09565 PF00692 dUTPase GII89_09580 PF00303 Thymidylate synthase GII89_09590 PF15493 Domain of unknown function, YrpD GII89_09595 PF14037 YoqO-like protein GII89_09605 PF02416 mttA/Hcf106 family GII89_09620 PF08327 Activator of Hsp90 ATPase homolog 1-like protein GII89_09630 PF03323 Bacillus/Clostridium GerA spore germination protein GII89_09635 PF03845 Spore germination protein GII89_09640 PF05504 Spore germination B3/ GerAC like, C-terminal GII89_09650 PF13761 Domain of unknown function (DUF4166) GII89_09655 PF14158 YndJ-like protein GII89_09665 PF05908 Poly-gamma-glutamate hydrolase GII89_09670 PF10710 Protein of unknown function (DUF2512) GII89_09675 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily GII89_09680 PF00717 Peptidase S24-like GII89_09680 PF01726 LexA DNA binding domain GII89_09685 PF01476 LysM domain GII89_09690 PF00239 Resolvase, N terminal domain GII89_09695 PF05979 Bacterial protein of unknown function (DUF896) GII89_09700 PF02779 Transketolase, pyrimidine binding domain GII89_09700 PF00456 Transketolase, thiamine diphosphate binding domain GII89_09700 PF02780 Transketolase, C-terminal domain GII89_09705 PF10747 Sporulation inhibitor of replication protein SirA GII89_09710 PF03672 Uncharacterised protein family (UPF0154) GII89_09715 PF09388 Spo0E like sporulation regulatory protein GII89_09720 PF02683 Cytochrome C biogenesis protein transmembrane region GII89_09725 PF00072 Response regulator receiver domain GII89_09730 PF07301 Protein of unknown function (DUF1453) GII89_09735 PF11084 Protein of unknown function (DUF2621) GII89_09745 PF08179 Small acid-soluble spore protein P family GII89_09755 PF00330 Aconitase family (aconitate hydratase) GII89_09755 PF00694 Aconitase C-terminal domain GII89_09760 PF00578 AhpC/TSA family GII89_09765 PF13040 Fur-regulated basic protein B GII89_09770 PF08177 Small acid-soluble spore protein N family GII89_09780 PF03061 Thioesterase superfamily GII89_09790 PF01521 Iron-sulphur cluster biosynthesis GII89_09795 PF02660 Glycerol-3-phosphate acyltransferase GII89_09800 PF13380 CoA binding domain GII89_09805 PF00986 DNA gyrase B subunit, carboxyl terminus GII89_09805 PF01751 Toprim domain GII89_09805 PF00204 DNA gyrase B GII89_09805 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GII89_09810 PF00521 DNA gyrase/topoisomerase IV, subunit A GII89_09810 PF03989 DNA gyrase C-terminal domain, beta-propeller GII89_09820 PF01235 Sodium:alanine symporter family GII89_09825 PF00942 Cellulose binding domain GII89_09825 PF00150 Cellulase (glycosyl hydrolase family 5) GII89_09830 PF17452 Uncharacterized YnfE-like GII89_09835 PF17189 Glycosyl hydrolase family 30 beta sandwich domain GII89_09840 PF03422 Carbohydrate binding module (family 6) GII89_09840 PF04616 Glycosyl hydrolases family 43 GII89_09845 PF04138 GtrA-like protein GII89_09850 PF00483 Nucleotidyl transferase GII89_09855 PF09335 SNARE associated Golgi protein GII89_09865 PF01039 Carboxyl transferase domain GII89_09870 PF00378 Enoyl-CoA hydratase/isomerase GII89_09875 PF00682 HMGL-like GII89_09880 PF00364 Biotin-requiring enzyme GII89_09885 PF02785 Biotin carboxylase C-terminal domain GII89_09885 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain GII89_09885 PF00289 Biotin carboxylase, N-terminal domain GII89_09890 PF00501 AMP-binding enzyme GII89_09890 PF13193 AMP-binding enzyme C-terminal domain GII89_09895 PF00441 Acyl-CoA dehydrogenase, C-terminal domain GII89_09895 PF02770 Acyl-CoA dehydrogenase, middle domain GII89_09895 PF02771 Acyl-CoA dehydrogenase, N-terminal domain GII89_09900 PF17329 Family of unknown function (DUF5367) GII89_09910 PF02638 Glycosyl hydrolase-like 10 GII89_09915 PF07098 Protein of unknown function (DUF1360) GII89_09920 PF00550 Phosphopantetheine attachment site GII89_09920 PF00668 Condensation domain GII89_09920 PF00975 Thioesterase domain GII89_09920 PF13193 AMP-binding enzyme C-terminal domain GII89_09920 PF00501 AMP-binding enzyme GII89_09925 PF00501 AMP-binding enzyme GII89_09925 PF00668 Condensation domain GII89_09925 PF00550 Phosphopantetheine attachment site GII89_09925 PF13193 AMP-binding enzyme C-terminal domain GII89_09930 PF13193 AMP-binding enzyme C-terminal domain GII89_09930 PF00668 Condensation domain GII89_09930 PF00550 Phosphopantetheine attachment site GII89_09930 PF00501 AMP-binding enzyme GII89_09935 PF13193 AMP-binding enzyme C-terminal domain GII89_09935 PF00501 AMP-binding enzyme GII89_09935 PF00668 Condensation domain GII89_09935 PF00550 Phosphopantetheine attachment site GII89_09940 PF00501 AMP-binding enzyme GII89_09940 PF13193 AMP-binding enzyme C-terminal domain GII89_09940 PF00668 Condensation domain GII89_09940 PF00550 Phosphopantetheine attachment site GII89_09945 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family GII89_09950 PF01263 Aldose 1-epimerase GII89_09955 PF01554 MatE GII89_09960 PF16800 IseA DL-endopeptidase inhibitor GII89_09970 PF00589 Phage integrase family GII89_09975 PF12728 Helix-turn-helix domain GII89_09985 PF03466 LysR substrate binding domain GII89_09985 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GII89_09990 PF00107 Zinc-binding dehydrogenase GII89_09990 PF08240 Alcohol dehydrogenase GroES-like domain GII89_09995 PF07992 Pyridine nucleotide-disulphide oxidoreductase GII89_09995 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster GII89_10000 PF00310 Glutamine amidotransferases class-II GII89_10000 PF01493 GXGXG motif GII89_10000 PF01645 Conserved region in glutamate synthase GII89_10000 PF04898 Glutamate synthase central domain GII89_10005 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GII89_10005 PF03466 LysR substrate binding domain GII89_10010 PF01472 PUA domain GII89_10010 PF00696 Amino acid kinase family GII89_10015 PF14748 Pyrroline-5-carboxylate reductase dimerisation GII89_10015 PF03807 NADP oxidoreductase coenzyme F420-dependent GII89_10020 PF02334 Replication terminator protein GII89_10025 PF00106 short chain dehydrogenase GII89_10030 PF06103 Bacterial protein of unknown function (DUF948) GII89_10040 PF13302 Acetyltransferase (GNAT) domain GII89_10045 PF07690 Major Facilitator Superfamily GII89_10050 PF00370 FGGY family of carbohydrate kinases, N-terminal domain GII89_10050 PF02782 FGGY family of carbohydrate kinases, C-terminal domain GII89_10055 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GII89_10055 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain GII89_10060 PF01568 Molydopterin dinucleotide binding domain GII89_10060 PF04879 Molybdopterin oxidoreductase Fe4S4 domain GII89_10060 PF00384 Molybdopterin oxidoreductase GII89_10070 PF17094 Uncharacterised protein family (UPF0715) GII89_10085 PF13217 Protein of unknown function (DUF4025) GII89_10090 PF05227 CHASE3 domain GII89_10090 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GII89_10090 PF00672 HAMP domain GII89_10095 PF03241 4-hydroxyphenylacetate 3-hydroxylase C terminal GII89_10095 PF11794 4-hydroxyphenylacetate 3-hydroxylase N terminal GII89_10100 PF03330 Lytic transglycolase GII89_10105 PF06912 Protein of unknown function (DUF1275) GII89_10110 PF00544 Pectate lyase GII89_10115 PF02586 SOS response associated peptidase (SRAP) GII89_10125 PF00190 Cupin GII89_10130 PF16302 Domain of unknown function (DUF4944) GII89_10140 PF00583 Acetyltransferase (GNAT) family GII89_10140 PF14268 YoaP-like GII89_10160 PF04294 VanW like protein GII89_10165 PF11188 Protein of unknown function (DUF2975) GII89_10170 PF13443 Cro/C1-type HTH DNA-binding domain GII89_10175 PF05675 Protein of unknown function (DUF817) GII89_10180 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GII89_10180 PF03466 LysR substrate binding domain GII89_10185 PF00892 EamA-like transporter family GII89_10195 PF01965 DJ-1/PfpI family GII89_10210 PF11518 Protein of unknown function (DUF3221) GII89_10225 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain GII89_10225 PF00391 PEP-utilising enzyme, mobile domain GII89_10230 PF00457 Glycosyl hydrolases family 11 GII89_10235 PF05154 TM2 domain GII89_10240 PF01381 Helix-turn-helix GII89_10255 PF02586 SOS response associated peptidase (SRAP) GII89_10290 PF18801 response regulator aspartate phosphatase H, N terminal GII89_10305 PF08863 YolD-like protein GII89_10315 PF07693 KAP family P-loop domain GII89_10340 PF14411 A nuclease of the HNH/ENDO VII superfamily with conserved LHH GII89_10340 PF04740 LXG domain of WXG superfamily GII89_10345 PF09346 SMI1 / KNR4 family (SUKH-1) GII89_10350 PF01593 Flavin containing amine oxidoreductase GII89_10355 PF12708 Pectate lyase superfamily protein GII89_10355 PF11962 Peptidase_G2, IMC autoproteolytic cleavage domain GII89_10360 PF01588 Putative tRNA binding domain GII89_10365 PF12833 Helix-turn-helix domain GII89_10365 PF07883 Cupin domain GII89_10370 PF00583 Acetyltransferase (GNAT) family GII89_10375 PF13305 Tetracyclin repressor-like, C-terminal domain GII89_10375 PF00440 Bacterial regulatory proteins, tetR family GII89_10380 PF00753 Metallo-beta-lactamase superfamily GII89_10385 PF06445 GyrI-like small molecule binding domain GII89_10390 PF13280 WYL domain GII89_10390 PF08279 HTH domain GII89_10400 PF01022 Bacterial regulatory protein, arsR family GII89_10410 PF04238 Protein of unknown function (DUF420) GII89_10415 PF18846 Bacterial archaeo-eukaryotic release factor family 5 GII89_10425 PF02016 LD-carboxypeptidase N-terminal domain GII89_10425 PF17676 LD-carboxypeptidase C-terminal domain GII89_10430 PF00487 Fatty acid desaturase GII89_10435 PF07730 Histidine kinase GII89_10440 PF00072 Response regulator receiver domain GII89_10440 PF00196 Bacterial regulatory proteins, luxR family GII89_10445 PF06725 3D domain GII89_10445 PF01476 LysM domain GII89_10450 PF00570 HRDC domain GII89_10450 PF16124 RecQ zinc-binding GII89_10450 PF00271 Helicase conserved C-terminal domain GII89_10450 PF09382 RQC domain GII89_10450 PF00270 DEAD/DEAH box helicase GII89_10460 PF02525 Flavodoxin-like fold GII89_10465 PF01258 Prokaryotic dksA/traR C4-type zinc finger GII89_10480 PF00011 Hsp20/alpha crystallin family GII89_10495 PF08000 Bacterial PH domain GII89_10505 PF00171 Aldehyde dehydrogenase family GII89_10510 PF13249 Squalene-hopene cyclase N-terminal domain GII89_10510 PF13243 Squalene-hopene cyclase C-terminal domain GII89_10515 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain GII89_10515 PF02777 Iron/manganese superoxide dismutases, C-terminal domain GII89_10520 PF00209 Sodium:neurotransmitter symporter family GII89_10525 PF01758 Sodium Bile acid symporter family GII89_10530 PF00364 Biotin-requiring enzyme GII89_10530 PF02817 e3 binding domain GII89_10530 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) GII89_10535 PF00676 Dehydrogenase E1 component GII89_10535 PF02779 Transketolase, pyrimidine binding domain GII89_10535 PF16870 2-oxoglutarate dehydrogenase C-terminal GII89_10540 PF00092 von Willebrand factor type A domain GII89_10545 PF07728 AAA domain (dynein-related subfamily) GII89_10550 PF13627 Prokaryotic lipoprotein-attachment site GII89_10550 PF00080 Copper/zinc superoxide dismutase (SODC) GII89_10555 PF00877 NlpC/P60 family GII89_10555 PF01476 LysM domain GII89_10560 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase GII89_10565 PF02457 DisA bacterial checkpoint controller nucleotide-binding GII89_10565 PF10372 Bacterial membrane-spanning protein N-terminus GII89_10570 PF01554 MatE GII89_10575 PF01740 STAS domain GII89_10580 PF02585 GlcNAc-PI de-N-acetylase GII89_10585 PF08830 Protein of unknown function (DUF1806) GII89_10595 PF00892 EamA-like transporter family GII89_10610 PF02447 GntP family permease GII89_10615 PF14552 Tautomerase enzyme GII89_10620 PF01638 HxlR-like helix-turn-helix GII89_10625 PF00881 Nitroreductase family GII89_10630 PF01738 Dienelactone hydrolase family GII89_10635 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily GII89_10640 PF11755 Protein of unknown function (DUF3311) GII89_10645 PF00474 Sodium:solute symporter family GII89_10650 PF17820 PDZ domain GII89_10650 PF03572 Peptidase family S41 GII89_10650 PF01471 Putative peptidoglycan binding domain GII89_10655 PF08241 Methyltransferase domain GII89_10665 PF02557 D-alanyl-D-alanine carboxypeptidase GII89_10670 PF01048 Phosphorylase superfamily GII89_10680 PF14191 YodL-like GII89_10685 PF01569 PAP2 superfamily GII89_10690 PF14162 YozD-like protein GII89_10705 PF06855 YozE SAM-like fold GII89_10710 PF14122 YokU-like protein, putative antitoxin GII89_10715 PF12544 Lysine-2,3-aminomutase GII89_10720 PF00583 Acetyltransferase (GNAT) family GII89_10725 PF01546 Peptidase family M20/M25/M40 GII89_10725 PF07687 Peptidase dimerisation domain GII89_10730 PF01144 Coenzyme A transferase GII89_10735 PF01144 Coenzyme A transferase GII89_10740 PF00202 Aminotransferase class-III GII89_10755 PF00583 Acetyltransferase (GNAT) family GII89_10760 PF00535 Glycosyl transferase family 2 GII89_10775 PF12996 DUF based on E. rectale Gene description (DUF3880) GII89_10780 PF02333 Phytase GII89_10785 PF08485 Polysaccharide biosynthesis protein C-terminal GII89_10785 PF02719 Polysaccharide biosynthesis protein GII89_10800 PF13443 Cro/C1-type HTH DNA-binding domain GII89_10850 PF00149 Calcineurin-like phosphoesterase GII89_10855 PF00269 Small, acid-soluble spore proteins, alpha/beta type GII89_10885 PF06445 GyrI-like small molecule binding domain GII89_10890 PF00692 dUTPase GII89_10895 PF00085 Thioredoxin GII89_10905 PF13392 HNH endonuclease GII89_10915 PF08343 Ribonucleotide reductase N-terminal GII89_10915 PF00317 Ribonucleotide reductase, all-alpha domain GII89_10915 PF02867 Ribonucleotide reductase, barrel domain GII89_10915 PF14528 LAGLIDADG-like domain GII89_10920 PF14528 LAGLIDADG-like domain GII89_10920 PF02867 Ribonucleotide reductase, barrel domain GII89_10920 PF00317 Ribonucleotide reductase, all-alpha domain GII89_10920 PF08343 Ribonucleotide reductase N-terminal GII89_10925 PF07972 NrdI Flavodoxin like GII89_11015 PF00145 C-5 cytosine-specific DNA methylase GII89_11025 PF06941 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C) GII89_11030 PF02223 Thymidylate kinase GII89_11040 PF09629 YorP protein GII89_11055 PF06725 3D domain GII89_11060 PF07733 Bacterial DNA polymerase III alpha NTPase domain GII89_11060 PF14579 Helix-hairpin-helix motif GII89_11060 PF17657 Bacterial DNA polymerase III alpha subunit finger domain GII89_11060 PF02811 PHP domain GII89_11065 PF01368 DHH family GII89_11065 PF17768 RecJ OB domain GII89_11075 PF03796 DnaB-like helicase C terminal domain GII89_11100 PF09636 XkdW protein GII89_11115 PF13229 Right handed beta helix region GII89_11120 PF05908 Poly-gamma-glutamate hydrolase GII89_11135 PF02586 SOS response associated peptidase (SRAP) GII89_11140 PF01068 ATP dependent DNA ligase domain GII89_11170 PF14037 YoqO-like protein GII89_11185 PF01844 HNH endonuclease GII89_11195 PF06908 YspA SLOG family GII89_11225 PF03374 Phage antirepressor protein KilAC domain GII89_11225 PF09669 Phage regulatory protein Rha (Phage_pRha) GII89_11255 PF09643 YopX protein GII89_11275 PF09467 Hypothetical protein Yopt GII89_11280 PF13443 Cro/C1-type HTH DNA-binding domain GII89_11290 PF14072 DNA-sulfur modification-associated GII89_11295 PF02899 Phage integrase, N-terminal SAM-like domain GII89_11295 PF00589 Phage integrase family GII89_11300 PF01381 Helix-turn-helix GII89_11335 PF14163 Super-infection exclusion protein B GII89_11365 PF17094 Uncharacterised protein family (UPF0715) GII89_11370 PF08808 RES domain GII89_11375 PF13443 Cro/C1-type HTH DNA-binding domain GII89_11415 PF01381 Helix-turn-helix GII89_11430 PF00216 Bacterial DNA-binding protein GII89_11440 PF09642 YonK protein GII89_11465 PF03237 Terminase-like family GII89_11550 PF09693 Phage uncharacterised protein (Phage_XkdX) GII89_11565 PF00589 Phage integrase family GII89_11565 PF13495 Phage integrase, N-terminal SAM-like domain GII89_11595 PF01551 Peptidase family M23 GII89_11595 PF01464 Transglycosylase SLT domain GII89_11595 PF10145 Phage-related minor tail protein GII89_11600 PF05709 Phage tail protein GII89_11605 PF06605 Prophage endopeptidase tail GII89_11615 PF12708 Pectate lyase superfamily protein GII89_11615 PF09992 Phosphodiester glycosidase GII89_11630 PF01510 N-acetylmuramoyl-L-alanine amidase GII89_11635 PF10960 BhlA holin family GII89_11640 PF04688 SPP1 phage holin GII89_11645 PF02600 Disulfide bond formation protein DsbB GII89_11650 PF00535 Glycosyl transferase family 2 GII89_11655 PF00085 Thioredoxin GII89_11660 PF00664 ABC transporter transmembrane region GII89_11660 PF03412 Peptidase C39 family GII89_11660 PF00005 ABC transporter GII89_11670 PF06713 Bacterial PH domain GII89_11675 PF11799 impB/mucB/samB family C-terminal domain GII89_11675 PF11798 IMS family HHH motif GII89_11675 PF00817 impB/mucB/samB family GII89_11680 PF08863 YolD-like protein GII89_11695 PF16219 Domain of unknown function (DUF4879) GII89_11705 PF13302 Acetyltransferase (GNAT) domain GII89_11715 PF09346 SMI1 / KNR4 family (SUKH-1) GII89_11720 PF04740 LXG domain of WXG superfamily GII89_11720 PF15652 HNH/Endo VII superfamily toxin with a SHH signature GII89_11725 PF09346 SMI1 / KNR4 family (SUKH-1) GII89_11740 PF00565 Staphylococcal nuclease homologue GII89_11740 PF05901 Excalibur calcium-binding domain GII89_11745 PF14470 Bacterial PH domain GII89_11750 PF02522 Aminoglycoside 3-N-acetyltransferase GII89_11775 PF07508 Recombinase GII89_11775 PF00239 Resolvase, N terminal domain GII89_11780 PF02719 Polysaccharide biosynthesis protein GII89_11785 PF01641 SelR domain GII89_11790 PF01625 Peptide methionine sulfoxide reductase GII89_11795 PF01047 MarR family GII89_11800 PF01554 MatE GII89_11805 PF17431 Uncharacterized YmpT-like GII89_11810 PF09911 Uncharacterized protein conserved in bacteria (DUF2140) GII89_11815 PF13472 GDSL-like Lipase/Acylhydrolase family GII89_11820 PF02630 SCO1/SenC GII89_11825 PF10751 Protein of unknown function (DUF2535) GII89_11830 PF00585 C-terminal regulatory domain of Threonine dehydratase GII89_11830 PF00291 Pyridoxal-phosphate dependent enzyme GII89_11835 PF08461 Ribonuclease R winged-helix domain GII89_11835 PF00158 Sigma-54 interaction domain GII89_11840 PF03006 Haemolysin-III related GII89_11850 PF00186 Dihydrofolate reductase GII89_11855 PF00303 Thymidylate synthase GII89_11860 PF04608 Phosphatidylglycerophosphatase A GII89_11865 PF14005 YpjP-like protein GII89_11870 PF04445 Putative SAM-dependent methyltransferase GII89_11875 PF06491 Disulphide isomerase GII89_11880 PF00920 Dehydratase family GII89_11885 PF08712 Scaffold protein Nfu/NifU N terminal GII89_11885 PF13769 Virulence factor GII89_11890 PF01966 HD domain GII89_11895 PF00255 Glutathione peroxidase GII89_11900 PF04204 Homoserine O-succinyltransferase GII89_11905 PF00534 Glycosyl transferases group 1 GII89_11905 PF06925 Monogalactosyldiacylglycerol (MGDG) synthase GII89_11915 PF00313 'Cold-shock' DNA-binding domain GII89_11925 PF10819 Protein of unknown function (DUF2564) GII89_11930 PF10782 Zinc-finger GII89_11935 PF13456 Reverse transcriptase-like GII89_11940 PF02592 Putative vitamin uptake transporter GII89_11945 PF13456 Reverse transcriptase-like GII89_11955 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain GII89_11955 PF01367 5'-3' exonuclease, C-terminal SAM fold GII89_11965 PF10752 Protein of unknown function (DUF2533) GII89_11970 PF00350 Dynamin family GII89_11980 PF04140 Isoprenylcysteine carboxyl methyltransferase (ICMT) family GII89_11985 PF02797 Chalcone and stilbene synthases, C-terminal domain GII89_11985 PF00195 Chalcone and stilbene synthases, N-terminal domain GII89_11990 PF00860 Permease family GII89_11995 PF00156 Phosphoribosyl transferase domain GII89_12000 PF02074 Carboxypeptidase Taq (M32) metallopeptidase GII89_12005 PF03812 2-keto-3-deoxygluconate permease GII89_12010 PF01081 KDPG and KHG aldolase GII89_12015 PF00294 pfkB family carbohydrate kinase GII89_12020 PF00356 Bacterial regulatory proteins, lacI family GII89_12025 PF04962 KduI/IolB family GII89_12035 PF13307 Helicase C-terminal domain GII89_12045 PF14139 YpzG-like protein GII89_12050 PF01170 Putative RNA methylase family UPF0020 GII89_12050 PF02926 THUMP domain GII89_12060 PF05103 DivIVA protein GII89_12065 PF06908 YspA SLOG family GII89_12070 PF11122 Inner spore coat protein D GII89_12080 PF13482 RNase_H superfamily GII89_12085 PF00270 DEAD/DEAH box helicase GII89_12085 PF09369 Domain of unknown function (DUF1998) GII89_12085 PF00271 Helicase conserved C-terminal domain GII89_12090 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 GII89_12100 PF14179 YppG-like protein GII89_12105 PF14178 YppF-like protein GII89_12110 PF08807 Bacterial domain of unknown function (DUF1798) GII89_12115 PF17522 Family of unknown function (DUF5446) GII89_12125 PF10720 Protein of unknown function (DUF2515) GII89_12130 PF03838 Recombination protein U GII89_12135 PF00905 Penicillin binding protein transpeptidase domain GII89_12135 PF00912 Transglycosylase GII89_12145 PF00730 HhH-GPD superfamily base excision DNA repair protein GII89_12145 PF00633 Helix-hairpin-helix motif GII89_12145 PF10576 Iron-sulfur binding domain of endonuclease III GII89_12150 PF07261 Replication initiation and membrane attachment GII89_12155 PF00152 tRNA synthetases class II (D, K and N) GII89_12155 PF01336 OB-fold nucleic acid binding domain GII89_12160 PF00155 Aminotransferase class I and II GII89_12165 PF03413 Peptidase propeptide and YPEB domain GII89_12165 PF17881 Domain of unknown function (DUF5590) GII89_12170 PF14084 Protein of unknown function (DUF4264) GII89_12175 PF13307 Helicase C-terminal domain GII89_12175 PF04851 Type III restriction enzyme, res subunit GII89_12175 PF00929 Exonuclease GII89_12180 PF02261 Aspartate decarboxylase GII89_12185 PF02569 Pantoate-beta-alanine ligase GII89_12190 PF02548 Ketopantoate hydroxymethyltransferase GII89_12195 PF02237 Biotin protein ligase C terminal domain GII89_12195 PF03099 Biotin/lipoate A/B protein ligase family GII89_12195 PF08279 HTH domain GII89_12200 PF12627 Probable RNA and SrmB- binding site of polymerase A GII89_12200 PF01743 Poly A polymerase head domain GII89_12200 PF13735 tRNA nucleotidyltransferase domain 2 putative GII89_12205 PF00534 Glycosyl transferases group 1 GII89_12205 PF13439 Glycosyltransferase Family 4 GII89_12210 PF02585 GlcNAc-PI de-N-acetylase GII89_12215 PF02142 MGS-like domain GII89_12220 PF05173 Dihydrodipicolinate reductase, C-terminus GII89_12220 PF01113 Dihydrodipicolinate reductase, N-terminus GII89_12225 PF03819 MazG nucleotide pyrophosphohydrolase domain GII89_12230 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 GII89_12230 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) GII89_12235 PF09577 Sporulation protein YpjB (SpoYpjB) GII89_12240 PF07187 Protein of unknown function (DUF1405) GII89_12245 PF13442 Cytochrome C oxidase, cbb3-type, subunit III GII89_12245 PF00032 Cytochrome b(C-terminal)/b6/petD GII89_12250 PF00033 Cytochrome b/b6/petB GII89_12255 PF00355 Rieske [2Fe-2S] domain GII89_12260 PF10673 Protein of unknown function (DUF2487) GII89_12265 PF08864 UPF0302 domain GII89_12265 PF08858 IDEAL domain GII89_12275 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) GII89_12280 PF02153 Prephenate dehydrogenase GII89_12280 PF01842 ACT domain GII89_12285 PF00155 Aminotransferase class I and II GII89_12290 PF00290 Tryptophan synthase alpha chain GII89_12295 PF00291 Pyridoxal-phosphate dependent enzyme GII89_12300 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase GII89_12305 PF00218 Indole-3-glycerol phosphate synthase GII89_12310 PF02885 Glycosyl transferase family, helical bundle domain GII89_12310 PF00591 Glycosyl transferase family, a/b domain GII89_12315 PF00425 chorismate binding enzyme GII89_12315 PF04715 Anthranilate synthase component I, N terminal region GII89_12320 PF07736 Chorismate mutase type I GII89_12325 PF01761 3-dehydroquinate synthase GII89_12330 PF01264 Chorismate synthase GII89_12335 PF01739 CheR methyltransferase, SAM binding domain GII89_12335 PF03705 CheR methyltransferase, all-alpha domain GII89_12340 PF00334 Nucleoside diphosphate kinase GII89_12345 PF00348 Polyprenyl synthetase GII89_12350 PF01209 ubiE/COQ5 methyltransferase family GII89_12355 PF07307 Heptaprenyl diphosphate synthase (HEPPP synthase) subunit 1 GII89_12360 PF02081 Tryptophan RNA-binding attenuator protein GII89_12365 PF01227 GTP cyclohydrolase I GII89_12370 PF00216 Bacterial DNA-binding protein GII89_12375 PF09547 Stage IV sporulation protein A (spore_IV_A) GII89_12385 PF10966 Protein of unknown function (DUF2768) GII89_12390 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus GII89_12390 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus GII89_12395 PF01926 50S ribosome-binding GTPase GII89_12395 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal GII89_12405 PF14045 YIEGIA protein GII89_12415 PF14140 YpzI-like protein GII89_12420 PF01070 FMN-dependent dehydrogenase GII89_12425 PF00575 S1 RNA binding domain GII89_12430 PF02224 Cytidylate kinase GII89_12435 PF17313 Family of unknown function (DUF5359) GII89_12440 PF07238 PilZ domain GII89_12440 PF12945 Flagellar protein YcgR GII89_12445 PF03413 Peptidase propeptide and YPEB domain GII89_12445 PF14620 YpeB sporulation GII89_12450 PF07486 Cell Wall Hydrolase GII89_12450 PF01471 Putative peptidoglycan binding domain GII89_12455 PF13367 PrsW family intramembrane metalloprotease GII89_12465 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain GII89_12465 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase GII89_12470 PF05389 Negative regulator of genetic competence (MecA) GII89_12475 PF00149 Calcineurin-like phosphoesterase GII89_12480 PF10864 Protein of unknown function (DUF2663) GII89_12485 PF01476 LysM domain GII89_12490 PF02517 CPBP intramembrane metalloprotease GII89_12495 PF00270 DEAD/DEAH box helicase GII89_12495 PF00271 Helicase conserved C-terminal domain GII89_12500 PF14493 Helix-turn-helix domain GII89_12510 PF12822 ECF transporter, substrate-specific component GII89_12515 PF01842 ACT domain GII89_12515 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain GII89_12515 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GII89_12520 PF01487 Type I 3-dehydroquinase GII89_12530 PF08281 Sigma-70, region 4 GII89_12530 PF04542 Sigma-70 region 2 GII89_12535 PF18698 Histidine kinase sensor domain GII89_12535 PF00672 HAMP domain GII89_12535 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GII89_12535 PF00512 His Kinase A (phospho-acceptor) domain GII89_12535 PF00989 PAS fold GII89_12540 PF00072 Response regulator receiver domain GII89_12540 PF00486 Transcriptional regulatory protein, C terminal GII89_12545 PF01578 Cytochrome C assembly protein GII89_12550 PF05140 ResB-like family GII89_12555 PF00578 AhpC/TSA family GII89_12560 PF00849 RNA pseudouridylate synthase GII89_12560 PF01479 S4 domain GII89_12565 PF07670 Nucleoside recognition GII89_12570 PF07670 Nucleoside recognition GII89_12575 PF00768 D-alanyl-D-alanine carboxypeptidase GII89_12575 PF07943 Penicillin-binding protein 5, C-terminal domain GII89_12580 PF13047 Protein of unknown function (DUF3907) GII89_12585 PF04079 Segregation and condensation complex subunit ScpB GII89_12590 PF02616 Segregation and condensation protein ScpA GII89_12595 PF03745 Domain of unknown function (DUF309) GII89_12600 PF00583 Acetyltransferase (GNAT) family GII89_12605 PF00885 6,7-dimethyl-8-ribityllumazine synthase GII89_12610 PF00925 GTP cyclohydrolase II GII89_12610 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase GII89_12615 PF00677 Lumazine binding domain GII89_12620 PF01872 RibD C-terminal domain GII89_12620 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region GII89_12630 PF10502 Signal peptidase, peptidase S26 GII89_12640 PF09855 Nucleic-acid-binding protein containing Zn-ribbon domain (DUF2082) GII89_12650 PF10676 Spore germination protein gerPA/gerPF GII89_12655 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD GII89_12660 PF06207 Protein of unknown function (DUF1002) GII89_12665 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain GII89_12665 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain GII89_12670 PF03323 Bacillus/Clostridium GerA spore germination protein GII89_12675 PF14097 Stage V sporulation protein AE1 GII89_12680 PF03862 SpoVAC/SpoVAEB sporulation membrane protein GII89_12685 PF07451 Stage V sporulation protein AD (SpoVAD) GII89_12690 PF03862 SpoVAC/SpoVAEB sporulation membrane protein GII89_12695 PF13782 Stage V sporulation protein AB GII89_12700 PF12164 Stage V sporulation protein AA GII89_12705 PF04545 Sigma-70, region 4 GII89_12705 PF04542 Sigma-70 region 2 GII89_12705 PF04539 Sigma-70 region 3 GII89_12710 PF13581 Histidine kinase-like ATPase domain GII89_12715 PF01740 STAS domain GII89_12720 PF00768 D-alanyl-D-alanine carboxypeptidase GII89_12720 PF07943 Penicillin-binding protein 5, C-terminal domain GII89_12725 PF01048 Phosphorylase superfamily GII89_12730 PF01676 Metalloenzyme superfamily GII89_12735 PF02899 Phage integrase, N-terminal SAM-like domain GII89_12735 PF00589 Phage integrase family GII89_12740 PF14004 Protein of unknown function (DUF4227) GII89_12745 PF01475 Ferric uptake regulator family GII89_12750 PF01944 Stage II sporulation protein M GII89_12760 PF03949 Malic enzyme, NAD binding domain GII89_12760 PF00390 Malic enzyme, N-terminal domain GII89_12760 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain GII89_12765 PF03553 Na+/H+ antiporter family GII89_12770 PF10415 Fumarase C C-terminus GII89_12770 PF00206 Lyase GII89_12775 PF17763 Glutaminase/Asparaginase C-terminal domain GII89_12775 PF00710 Asparaginase, N-terminal GII89_12780 PF01381 Helix-turn-helix GII89_12790 PF00293 NUDIX domain GII89_12795 PF13072 Mother cell inhibitor of FtsZ GII89_12800 PF00248 Aldo/keto reductase family GII89_12805 PF13025 Protein of unknown function (DUF3886) GII89_12810 PF12146 Serine aminopeptidase, S33 GII89_12815 PF10827 Protein of unknown function (DUF2552) GII89_12820 PF01521 Iron-sulphur cluster biosynthesis GII89_12825 PF13673 Acetyltransferase (GNAT) domain GII89_12825 PF04229 GrpB protein GII89_12830 PF03992 Antibiotic biosynthesis monooxygenase GII89_12835 PF00583 Acetyltransferase (GNAT) family GII89_12840 PF08863 YolD-like protein GII89_12845 PF00817 impB/mucB/samB family GII89_12845 PF11799 impB/mucB/samB family C-terminal domain GII89_12850 PF14164 YqzH-like protein GII89_12855 PF07690 Major Facilitator Superfamily GII89_12865 PF00485 Phosphoribulokinase / Uridine kinase family GII89_12870 PF00291 Pyridoxal-phosphate dependent enzyme GII89_12875 PF00106 short chain dehydrogenase GII89_12880 PF00753 Metallo-beta-lactamase superfamily GII89_12885 PF03807 NADP oxidoreductase coenzyme F420-dependent GII89_12885 PF14748 Pyrroline-5-carboxylate reductase dimerisation GII89_12890 PF01546 Peptidase family M20/M25/M40 GII89_12895 PF00724 NADH:flavin oxidoreductase / NADH oxidase family GII89_12900 PF12146 Serine aminopeptidase, S33 GII89_12910 PF12706 Beta-lactamase superfamily domain GII89_12915 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain GII89_12915 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain GII89_12920 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain GII89_12920 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase GII89_12925 PF11799 impB/mucB/samB family C-terminal domain GII89_12925 PF00817 impB/mucB/samB family GII89_12925 PF11798 IMS family HHH motif GII89_12935 PF02096 60Kd inner membrane protein GII89_12940 PF09844 Uncharacterized conserved protein (COG2071) GII89_12945 PF07687 Peptidase dimerisation domain GII89_12945 PF01546 Peptidase family M20/M25/M40 GII89_12950 PF01039 Carboxyl transferase domain GII89_12965 PF03734 L,D-transpeptidase catalytic domain GII89_12970 PF06081 Aromatic acid exporter family member 1 GII89_12970 PF11728 Putative aromatic acid exporter C-terminal domain GII89_12975 PF00005 ABC transporter GII89_12980 PF00528 Binding-protein-dependent transport system inner membrane component GII89_12985 PF00497 Bacterial extracellular solute-binding proteins, family 3 GII89_12990 PF06491 Disulphide isomerase GII89_12995 PF00781 Diacylglycerol kinase catalytic domain GII89_13000 PF07690 Major Facilitator Superfamily GII89_13005 PF13411 MerR HTH family regulatory protein GII89_13005 PF06445 GyrI-like small molecule binding domain GII89_13010 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) GII89_13010 PF00364 Biotin-requiring enzyme GII89_13010 PF02817 e3 binding domain GII89_13015 PF02779 Transketolase, pyrimidine binding domain GII89_13015 PF02780 Transketolase, C-terminal domain GII89_13020 PF00676 Dehydrogenase E1 component GII89_13025 PF07992 Pyridine nucleotide-disulphide oxidoreductase GII89_13025 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GII89_13030 PF00871 Acetokinase family GII89_13035 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain GII89_13035 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase GII89_13040 PF01515 Phosphate acetyl/butaryl transferase GII89_13045 PF02954 Bacterial regulatory protein, Fis family GII89_13045 PF00989 PAS fold GII89_13045 PF00158 Sigma-54 interaction domain GII89_13050 PF11118 Protein of unknown function (DUF2627) GII89_13060 PF03972 MmgE/PrpD family GII89_13065 PF00285 Citrate synthase, C-terminal domain GII89_13070 PF02770 Acyl-CoA dehydrogenase, middle domain GII89_13070 PF00441 Acyl-CoA dehydrogenase, C-terminal domain GII89_13070 PF02771 Acyl-CoA dehydrogenase, N-terminal domain GII89_13075 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain GII89_13075 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain GII89_13080 PF02803 Thiolase, C-terminal domain GII89_13080 PF00108 Thiolase, N-terminal domain GII89_13085 PF03009 Glycerophosphoryl diester phosphodiesterase family GII89_13090 PF01520 N-acetylmuramoyl-L-alanine amidase GII89_13105 PF00724 NADH:flavin oxidoreductase / NADH oxidase family GII89_13110 PF00072 Response regulator receiver domain GII89_13110 PF08769 Sporulation initiation factor Spo0A C terminal GII89_13115 PF17820 PDZ domain GII89_13115 PF05580 SpoIVB peptidase S55 GII89_13120 PF13476 AAA domain GII89_13125 PF01316 Arginine repressor, DNA binding domain GII89_13125 PF02863 Arginine repressor, C-terminal domain GII89_13130 PF01728 FtsJ-like methyltransferase GII89_13130 PF01479 S4 domain GII89_13135 PF02780 Transketolase, C-terminal domain GII89_13135 PF02779 Transketolase, pyrimidine binding domain GII89_13135 PF13292 1-deoxy-D-xylulose-5-phosphate synthase GII89_13140 PF00348 Polyprenyl synthetase GII89_13145 PF02609 Exonuclease VII small subunit GII89_13150 PF13742 OB-fold nucleic acid binding domain GII89_13150 PF02601 Exonuclease VII, large subunit GII89_13155 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain GII89_13155 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain GII89_13160 PF01029 NusB family GII89_13165 PF03780 Asp23 family, cell envelope-related function GII89_13170 PF02785 Biotin carboxylase C-terminal domain GII89_13170 PF00289 Biotin carboxylase, N-terminal domain GII89_13170 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain GII89_13175 PF00364 Biotin-requiring enzyme GII89_13180 PF12685 SpoIIIAH-like protein GII89_13190 PF09581 Stage III sporulation protein AF (Spore_III_AF) GII89_13195 PF09546 Stage III sporulation protein AE (spore_III_AE) GII89_13200 PF06686 Stage III sporulation protein AC/AD protein family GII89_13205 PF06686 Stage III sporulation protein AC/AD protein family GII89_13210 PF09548 Stage III sporulation protein AB (spore_III_AB) GII89_13220 PF10942 Protein of unknown function (DUF2619) GII89_13225 PF09285 Elongation factor P, C-terminal GII89_13225 PF08207 Elongation factor P (EF-P) KOW-like domain GII89_13225 PF01132 Elongation factor P (EF-P) OB domain GII89_13230 PF01321 Creatinase/Prolidase N-terminal domain GII89_13230 PF00557 Metallopeptidase family M24 GII89_13235 PF01220 Dehydroquinase class II GII89_13240 PF11085 Conserved membrane protein YqhR GII89_13245 PF07136 Protein of unknown function (DUF1385) GII89_13255 PF01734 Patatin-like phospholipase GII89_13260 PF02742 Iron dependent repressor, metal binding and dimerisation domain GII89_13260 PF01325 Iron dependent repressor, N-terminal DNA binding domain GII89_13265 PF03099 Biotin/lipoate A/B protein ligase family GII89_13270 PF00581 Rhodanese-like domain GII89_13275 PF02347 Glycine cleavage system P-protein GII89_13280 PF02347 Glycine cleavage system P-protein GII89_13285 PF08669 Glycine cleavage T-protein C-terminal barrel domain GII89_13285 PF01571 Aminomethyltransferase folate-binding domain GII89_13290 PF00176 SNF2 family N-terminal domain GII89_13290 PF00271 Helicase conserved C-terminal domain GII89_13295 PF11079 Bacterial protein YqhG of unknown function GII89_13300 PF08671 Anti-repressor SinI GII89_13305 PF01381 Helix-turn-helix GII89_13305 PF08671 Anti-repressor SinI GII89_13310 PF12389 Camelysin metallo-endopeptidase GII89_13325 PF13028 Protein of unknown function (DUF3889) GII89_13330 PF14038 YqzE-like protein GII89_13335 PF14173 ComG operon protein 7 GII89_13340 PF15980 Putative Competence protein ComGF GII89_13350 PF07963 Prokaryotic N-terminal methylation motif GII89_13355 PF07963 Prokaryotic N-terminal methylation motif GII89_13360 PF00482 Type II secretion system (T2SS), protein F GII89_13365 PF00437 Type II/IV secretion system protein GII89_13370 PF01544 CorA-like Mg2+ transporter protein GII89_13375 PF00571 CBS domain GII89_13375 PF03471 Transporter associated domain GII89_13375 PF01595 Cyclin M transmembrane N-terminal domain GII89_13380 PF01740 STAS domain GII89_13380 PF14361 RsbT co-antagonist protein rsbRD N-terminal domain GII89_13390 PF03960 ArsC family GII89_13395 PF11117 Protein of unknown function (DUF2626) GII89_13400 PF00753 Metallo-beta-lactamase superfamily GII89_13405 PF10958 Protein of unknown function (DUF2759) GII89_13410 PF01910 Thiamine-binding protein GII89_13420 PF00246 Zinc carboxypeptidase GII89_13425 PF00884 Sulfatase GII89_13430 PF00480 ROK family GII89_13435 PF06014 Bacterial protein of unknown function (DUF910) GII89_13440 PF01694 Rhomboid family GII89_13450 PF01812 5-formyltetrahydrofolate cyclo-ligase family GII89_13455 PF00471 Ribosomal protein L33 GII89_13460 PF00534 Glycosyl transferases group 1 GII89_13460 PF13439 Glycosyltransferase Family 4 GII89_13480 PF00005 ABC transporter GII89_13485 PF00005 ABC transporter GII89_13490 PF00528 Binding-protein-dependent transport system inner membrane component GII89_13495 PF00528 Binding-protein-dependent transport system inner membrane component GII89_13500 PF12849 PBP superfamily domain GII89_13510 PF07690 Major Facilitator Superfamily GII89_13515 PF02777 Iron/manganese superoxide dismutases, C-terminal domain GII89_13515 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain GII89_13520 PF04306 Protein of unknown function (DUF456) GII89_13525 PF06691 Protein of unknown function (DUF1189) GII89_13540 PF04551 GcpE protein GII89_13555 PF01475 Ferric uptake regulator family GII89_13560 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 GII89_13560 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) GII89_13565 PF11116 Protein of unknown function (DUF2624) GII89_13570 PF01261 Xylose isomerase-like TIM barrel GII89_13575 PF00270 DEAD/DEAH box helicase GII89_13575 PF00271 Helicase conserved C-terminal domain GII89_13580 PF14181 YqfQ-like protein GII89_13585 PF02401 LytB protein GII89_13590 PF01784 NIF3 (NGG1p interacting factor 3) GII89_13595 PF04816 tRNA (adenine(22)-N(1))-methyltransferase GII89_13600 PF13442 Cytochrome C oxidase, cbb3-type, subunit III GII89_13605 PF04542 Sigma-70 region 2 GII89_13605 PF03979 Sigma-70 factor, region 1.1 GII89_13605 PF00140 Sigma-70 factor, region 1.2 GII89_13605 PF04539 Sigma-70 region 3 GII89_13605 PF04545 Sigma-70, region 4 GII89_13610 PF10410 DnaB-helicase binding domain of primase GII89_13610 PF08275 DNA primase catalytic core, N-terminal domain GII89_13610 PF01807 CHC2 zinc finger GII89_13615 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 GII89_13620 PF03618 Kinase/pyrophosphorylase GII89_13625 PF08279 HTH domain GII89_13625 PF00571 CBS domain GII89_13630 PF02092 Glycyl-tRNA synthetase beta subunit GII89_13635 PF02091 Glycyl-tRNA synthetase alpha subunit GII89_13640 PF11967 Recombination protein O N terminal GII89_13640 PF02565 Recombination protein O C terminal GII89_13645 PF14006 YqzL-like protein GII89_13650 PF07650 KH domain GII89_13650 PF01926 50S ribosome-binding GTPase GII89_13655 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region GII89_13660 PF01219 Prokaryotic diacylglycerol kinase GII89_13665 PF02130 Uncharacterized protein family UPF0054 GII89_13670 PF07697 7TM-HD extracellular GII89_13670 PF07698 7TM receptor with intracellular HD hydrolase GII89_13670 PF01966 HD domain GII89_13675 PF02562 PhoH-like protein GII89_13680 PF06898 Putative stage IV sporulation protein YqfD GII89_13685 PF07873 YabP family GII89_13695 PF12127 SigmaW regulon antibacterial GII89_13700 PF01972 Serine dehydrogenase proteinase GII89_13700 PF01957 NfeD-like C-terminal, partner-binding GII89_13705 PF09424 Yqey-like protein GII89_13710 PF01165 Ribosomal protein S21 GII89_13715 PF02690 Na+/Pi-cotransporter GII89_13720 PF00919 Uncharacterized protein family UPF0004 GII89_13720 PF01938 TRAM domain GII89_13720 PF04055 Radical SAM superfamily GII89_13725 PF04452 RNA methyltransferase GII89_13735 PF00684 DnaJ central domain GII89_13735 PF01556 DnaJ C terminal domain GII89_13735 PF00226 DnaJ domain GII89_13740 PF00012 Hsp70 protein GII89_13745 PF01025 GrpE GII89_13750 PF01628 HrcA protein C terminal domain GII89_13755 PF06969 HemN C-terminal domain GII89_13755 PF04055 Radical SAM superfamily GII89_13760 PF00009 Elongation factor Tu GTP binding domain GII89_13760 PF03144 Elongation factor Tu domain 2 GII89_13760 PF06421 GTP-binding protein LepA C-terminus GII89_13760 PF00679 Elongation factor G C-terminus GII89_13765 PF12438 Protein of unknown function (DUF3679) GII89_13770 PF07454 Stage II sporulation protein P (SpoIIP) GII89_13775 PF03418 Germination protease GII89_13780 PF01649 Ribosomal protein S20 GII89_13785 PF06144 DNA polymerase III, delta subunit GII89_13795 PF14141 YqzM-like protein GII89_13800 PF00753 Metallo-beta-lactamase superfamily GII89_13800 PF13567 Domain of unknown function (DUF4131) GII89_13800 PF03772 Competence protein GII89_13805 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region GII89_13810 PF10531 SLBB domain GII89_13815 PF03807 NADP oxidoreductase coenzyme F420-dependent GII89_13815 PF14748 Pyrroline-5-carboxylate reductase dimerisation GII89_13820 PF13649 Methyltransferase domain GII89_13830 PF01966 HD domain GII89_13835 PF01467 Cytidylyltransferase-like GII89_13840 PF01985 CRS1 / YhbY (CRM) domain GII89_13845 PF08501 Shikimate dehydrogenase substrate binding domain GII89_13845 PF18317 Shikimate 5'-dehydrogenase C-terminal domain GII89_13845 PF01488 Shikimate / quinate 5-dehydrogenase GII89_13850 PF01926 50S ribosome-binding GTPase GII89_13860 PF08970 Sporulation inhibitor A GII89_13865 PF00657 GDSL-like Lipase/Acylhydrolase GII89_13870 PF01510 N-acetylmuramoyl-L-alanine amidase GII89_13870 PF01471 Putative peptidoglycan binding domain GII89_13875 PF09335 SNARE associated Golgi protein GII89_13880 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain GII89_13880 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase GII89_13890 PF14040 Deoxyribonuclease NucA/NucB GII89_13900 PF13408 Recombinase zinc beta ribbon domain GII89_13900 PF07508 Recombinase GII89_13900 PF00239 Resolvase, N terminal domain GII89_13905 PF01451 Low molecular weight phosphotyrosine protein phosphatase GII89_13910 PF01758 Sodium Bile acid symporter family GII89_13915 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily GII89_13920 PF01022 Bacterial regulatory protein, arsR family GII89_13925 PF08892 YqcI/YcgG family GII89_13930 PF13181 Tetratricopeptide repeat GII89_13930 PF18801 response regulator aspartate phosphatase H, N terminal GII89_13945 PF14410 HNH/ENDO VII superfamily nuclease with conserved GHE residues GII89_13945 PF14449 Pre-toxin TG GII89_13945 PF04740 LXG domain of WXG superfamily GII89_13950 PF05076 Suppressor of fused protein (SUFU) GII89_13970 PF01471 Putative peptidoglycan binding domain GII89_13970 PF01510 N-acetylmuramoyl-L-alanine amidase GII89_13975 PF05105 Bacteriophage holin family GII89_13985 PF09693 Phage uncharacterised protein (Phage_XkdX) GII89_13990 PF09636 XkdW protein GII89_14005 PF10076 Uncharacterised protein conserved in bacteria (DUF2313) GII89_14010 PF04865 Baseplate J-like protein GII89_14015 PF10934 Protein of unknown function (DUF2634) GII89_14020 PF10844 Protein of unknown function (DUF2577) GII89_14030 PF01476 LysM domain GII89_14035 PF01464 Transglycosylase SLT domain GII89_14045 PF08890 Phage XkdN-like tail assembly chaperone protein, TAC GII89_14060 PF09393 Phage tail tube protein GII89_14065 PF04984 Phage tail sheath protein subtilisin-like domain GII89_14065 PF17482 Phage tail sheath C-terminal domain GII89_14065 PF17481 Phage tail sheath protein beta-sandwich domain GII89_14080 PF04883 Bacteriophage HK97-gp10, putative tail-component GII89_14085 PF12206 Domain of unknown function (DUF3599) GII89_14090 PF11436 Protein of unknown function (DUF3199) GII89_14095 PF14553 YqbF, hypothetical protein domain GII89_14100 PF05065 Phage capsid family GII89_14105 PF14550 Putative phage serine protease XkdF GII89_14115 PF04233 Phage Mu protein F like protein GII89_14120 PF04860 Phage portal protein GII89_14125 PF04466 Phage terminase large subunit GII89_14125 PF17288 Terminase RNAseH like domain GII89_14130 PF10668 Phage terminase small subunit GII89_14150 PF17356 Phage-like element PBSX protein XtrA GII89_14155 PF05866 Endodeoxyribonuclease RusA GII89_14165 PF01695 IstB-like ATP binding protein GII89_14170 PF07261 Replication initiation and membrane attachment GII89_14175 PF03837 RecT family GII89_14180 PF09588 YqaJ-like viral recombinase domain GII89_14185 PF09466 Hypothetical protein Yqai GII89_14195 PF17448 Uncharacterized YqaH-like GII89_14200 PF01381 Helix-turn-helix GII89_14210 PF01381 Helix-turn-helix GII89_14215 PF01381 Helix-turn-helix GII89_14230 PF06114 IrrE N-terminal-like domain GII89_14255 PF06146 Phosphate-starvation-inducible E GII89_14260 PF00512 His Kinase A (phospho-acceptor) domain GII89_14265 PF00486 Transcriptional regulatory protein, C terminal GII89_14265 PF00072 Response regulator receiver domain GII89_14270 PF04235 Protein of unknown function (DUF418) GII89_14280 PF00583 Acetyltransferase (GNAT) family GII89_14285 PF02525 Flavodoxin-like fold GII89_14290 PF13787 Protein of unknown function with HXXEE motif GII89_14295 PF01925 Sulfite exporter TauE/SafE GII89_14300 PF01206 Sulfurtransferase TusA GII89_14305 PF00581 Rhodanese-like domain GII89_14305 PF00753 Metallo-beta-lactamase superfamily GII89_14315 PF00581 Rhodanese-like domain GII89_14315 PF01206 Sulfurtransferase TusA GII89_14325 PF13686 DsrE/DsrF/DrsH-like family GII89_14330 PF02583 Metal-sensitive transcriptional repressor GII89_14335 PF07883 Cupin domain GII89_14345 PF13411 MerR HTH family regulatory protein GII89_14345 PF06445 GyrI-like small molecule binding domain GII89_14350 PF07690 Major Facilitator Superfamily GII89_14355 PF00583 Acetyltransferase (GNAT) family GII89_14360 PF00571 CBS domain GII89_14360 PF03471 Transporter associated domain GII89_14360 PF01595 Cyclin M transmembrane N-terminal domain GII89_14365 PF14142 YrzO-like protein GII89_14370 PF00892 EamA-like transporter family GII89_14375 PF03466 LysR substrate binding domain GII89_14375 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GII89_14385 PF01545 Cation efflux family GII89_14385 PF16916 Dimerisation domain of Zinc Transporter GII89_14390 PF14552 Tautomerase enzyme GII89_14395 PF03466 LysR substrate binding domain GII89_14395 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GII89_14405 PF05525 Branched-chain amino acid transport protein GII89_14410 PF05437 Branched-chain amino acid transport protein (AzlD) GII89_14415 PF03591 AzlC protein GII89_14420 PF01037 Lrp/AsnC ligand binding domain GII89_14425 PF01337 Barstar (barnase inhibitor) GII89_14430 PF00067 Cytochrome P450 GII89_14435 PF00857 Isochorismatase family GII89_14440 PF10823 Protein of unknown function (DUF2568) GII89_14445 PF05163 DinB family GII89_14450 PF04439 Streptomycin adenylyltransferase GII89_14455 PF03060 Nitronate monooxygenase GII89_14460 PF01177 Asp/Glu/Hydantoin racemase GII89_14465 PF15493 Domain of unknown function, YrpD GII89_14470 PF09680 Family of unknown function GII89_14480 PF09223 ZinT (YodA) periplasmic lipocalin-like zinc-recruitment GII89_14485 PF04542 Sigma-70 region 2 GII89_14485 PF08281 Sigma-70, region 4 GII89_14490 PF00248 Aldo/keto reductase family GII89_14495 PF03600 Citrate transporter GII89_14500 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GII89_14500 PF03466 LysR substrate binding domain GII89_14505 PF04303 PrpF protein GII89_14510 PF01374 Glycosyl hydrolase family 46 GII89_14520 PF00561 alpha/beta hydrolase fold GII89_14540 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily GII89_14550 PF07875 Coat F domain GII89_14555 PF08240 Alcohol dehydrogenase GroES-like domain GII89_14555 PF13823 Alcohol dehydrogenase GroES-associated GII89_14555 PF00107 Zinc-binding dehydrogenase GII89_14565 PF07875 Coat F domain GII89_14570 PF13411 MerR HTH family regulatory protein GII89_14580 PF00107 Zinc-binding dehydrogenase GII89_14580 PF08240 Alcohol dehydrogenase GroES-like domain GII89_14585 PF01965 DJ-1/PfpI family GII89_14590 PF08244 Glycosyl hydrolases family 32 C terminal GII89_14590 PF00251 Glycosyl hydrolases family 32 N-terminal domain GII89_14595 PF03613 PTS system mannose/fructose/sorbose family IID component GII89_14600 PF03609 PTS system sorbose-specific iic component GII89_14605 PF03830 PTS system sorbose subfamily IIB component GII89_14610 PF03610 PTS system fructose IIA component GII89_14615 PF03610 PTS system fructose IIA component GII89_14615 PF00158 Sigma-54 interaction domain GII89_14615 PF00874 PRD domain GII89_14625 PF00324 Amino acid permease GII89_14630 PF01810 LysE type translocator GII89_14635 PF11495 Archaeal transcriptional regulator TrmB GII89_14635 PF01978 Sugar-specific transcriptional regulator TrmB GII89_14640 PF08281 Sigma-70, region 4 GII89_14640 PF04542 Sigma-70 region 2 GII89_14645 PF13739 Deacetylase PdaC GII89_14645 PF11738 Protein of unknown function (DUF3298) GII89_14650 PF01757 Acyltransferase family GII89_14655 PF14145 YrhK-like protein GII89_14660 PF00667 FAD binding domain GII89_14660 PF00175 Oxidoreductase NAD-binding domain GII89_14660 PF00067 Cytochrome P450 GII89_14660 PF00258 Flavodoxin GII89_14665 PF00440 Bacterial regulatory proteins, tetR family GII89_14665 PF16295 Tetracyclin repressor-like, C-terminal domain GII89_14670 PF08241 Methyltransferase domain GII89_14680 PF09501 Probable sporulation protein (Bac_small_yrzI) GII89_14685 PF01226 Formate/nitrite transporter GII89_14690 PF10057 Uncharacterized conserved protein (DUF2294) GII89_14695 PF01568 Molydopterin dinucleotide binding domain GII89_14695 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region GII89_14695 PF00037 4Fe-4S binding domain GII89_14695 PF04879 Molybdopterin oxidoreductase Fe4S4 domain GII89_14695 PF00384 Molybdopterin oxidoreductase GII89_14700 PF07849 Protein of unknown function (DUF1641) GII89_14705 PF14143 YrhC-like protein GII89_14710 PF01053 Cys/Met metabolism PLP-dependent enzyme GII89_14715 PF00291 Pyridoxal-phosphate dependent enzyme GII89_14720 PF01048 Phosphorylase superfamily GII89_14725 PF13649 Methyltransferase domain GII89_14730 PF10750 Protein of unknown function (DUF2536) GII89_14735 PF07423 Domain of unknown function (DUF1510) GII89_14740 PF03717 Penicillin-binding Protein dimerisation domain GII89_14740 PF00905 Penicillin binding protein transpeptidase domain GII89_14745 PF03449 Transcription elongation factor, N-terminal GII89_14745 PF01272 Transcription elongation factor, GreA/GreB, C-term GII89_14750 PF00485 Phosphoribulokinase / Uridine kinase family GII89_14770 PF02618 YceG-like family GII89_14775 PF06949 Protein of unknown function (DUF1292) GII89_14780 PF03652 Holliday junction resolvase GII89_14785 PF06135 IreB regulatory phosphoprotein GII89_14790 PF02272 DHHA1 domain GII89_14790 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain GII89_14790 PF01411 tRNA synthetases class II (A) GII89_14795 PF01594 AI-2E family transporter GII89_14800 PF00005 ABC transporter GII89_14805 PF00497 Bacterial extracellular solute-binding proteins, family 3 GII89_14810 PF00528 Binding-protein-dependent transport system inner membrane component GII89_14815 PF00528 Binding-protein-dependent transport system inner membrane component GII89_14820 PF13056 Protein of unknown function (DUF3918) GII89_14830 PF05239 PRC-barrel domain GII89_14835 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain GII89_14835 PF13538 UvrD-like helicase C-terminal domain GII89_14835 PF14490 Helix-hairpin-helix containing domain GII89_14840 PF13181 Tetratricopeptide repeat GII89_14840 PF07719 Tetratricopeptide repeat GII89_14850 PF00266 Aminotransferase class-V GII89_14855 PF02082 Transcriptional regulator GII89_14860 PF12002 MgsA AAA+ ATPase C terminal GII89_14860 PF05496 Holliday junction DNA helicase RuvB P-loop domain GII89_14860 PF16193 AAA C-terminal domain GII89_14865 PF00899 ThiF family GII89_14875 PF00152 tRNA synthetases class II (D, K and N) GII89_14875 PF01336 OB-fold nucleic acid binding domain GII89_14875 PF02938 GAD domain GII89_14880 PF13393 Histidyl-tRNA synthetase GII89_14880 PF03129 Anticodon binding domain GII89_14885 PF17449 Uncharacterized YrzK-like GII89_14890 PF01520 N-acetylmuramoyl-L-alanine amidase GII89_14890 PF08239 Bacterial SH3 domain GII89_14895 PF02580 D-Tyr-tRNA(Tyr) deacylase GII89_14900 PF04607 Region found in RelA / SpoT proteins GII89_14900 PF13291 ACT domain GII89_14900 PF02824 TGS domain GII89_14905 PF00156 Phosphoribosyl transferase domain GII89_14910 PF10141 Single-strand DNA-specific exonuclease, C terminal domain GII89_14910 PF17768 RecJ OB domain GII89_14910 PF01368 DHH family GII89_14910 PF02272 DHHA1 domain GII89_14915 PF06305 Lipopolysaccharide assembly protein A domain GII89_14920 PF02080 TrkA-C domain GII89_14925 PF07549 SecD/SecF GG Motif GII89_14925 PF02355 Protein export membrane protein GII89_14930 PF13797 Post-transcriptional regulator GII89_14935 PF01943 Polysaccharide biosynthesis protein GII89_14935 PF14667 Polysaccharide biosynthesis C-terminal domain GII89_14940 PF04239 Protein of unknown function (DUF421) GII89_14945 PF12670 Protein of unknown function (DUF3792) GII89_14950 PF02699 Preprotein translocase subunit GII89_14955 PF01702 Queuine tRNA-ribosyltransferase GII89_14960 PF02547 Queuosine biosynthesis protein GII89_14965 PF11146 Protein of unknown function (DUF2905) GII89_14970 PF05491 RuvB C-terminal winged helix domain GII89_14970 PF05496 Holliday junction DNA helicase RuvB P-loop domain GII89_14970 PF17864 RuvB AAA lid domain GII89_14975 PF07499 RuvA, C-terminal domain GII89_14975 PF01330 RuvA N terminal domain GII89_14980 PF08955 BofC C-terminal domain GII89_14980 PF08977 Bypass of Forespore C, N terminal GII89_14985 PF07690 Major Facilitator Superfamily GII89_14990 PF02894 Oxidoreductase family, C-terminal alpha/beta domain GII89_14990 PF01408 Oxidoreductase family, NAD-binding Rossmann fold GII89_15015 PF01235 Sodium:alanine symporter family GII89_15020 PF01709 Transcriptional regulator GII89_15025 PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) GII89_15030 PF01476 LysM domain GII89_15035 PF02445 Quinolinate synthetase A protein GII89_15040 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain GII89_15040 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain GII89_15045 PF00890 FAD binding domain GII89_15045 PF02910 Fumarate reductase flavoprotein C-term GII89_15050 PF00266 Aminotransferase class-V GII89_15055 PF08279 HTH domain GII89_15055 PF02829 3H domain GII89_15060 PF00800 Prephenate dehydratase GII89_15060 PF01842 ACT domain GII89_15065 PF01842 ACT domain GII89_15070 PF09269 Domain of unknown function (DUF1967) GII89_15070 PF01926 50S ribosome-binding GTPase GII89_15070 PF01018 GTP1/OBG GII89_15075 PF14682 Sporulation initiation phospho-transferase B, C-terminal GII89_15075 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain GII89_15085 PF01016 Ribosomal L27 protein GII89_15090 PF04327 Cysteine protease Prp GII89_15095 PF00829 Ribosomal prokaryotic L21 protein GII89_15100 PF02163 Peptidase family M50 GII89_15105 PF01551 Peptidase family M23 GII89_15110 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain GII89_15115 PF03775 Septum formation inhibitor MinC, C-terminal domain GII89_15120 PF04093 rod shape-determining protein MreD GII89_15125 PF04085 rod shape-determining protein MreC GII89_15135 PF04002 RadC-like JAB domain GII89_15135 PF00633 Helix-hairpin-helix motif GII89_15140 PF02545 Maf-like protein GII89_15145 PF05036 Sporulation related domain GII89_15150 PF06750 Bacterial Peptidase A24 N-terminal domain GII89_15150 PF01478 Type IV leader peptidase family GII89_15155 PF02875 Mur ligase family, glutamate ligase domain GII89_15155 PF08245 Mur ligase middle domain GII89_15160 PF08264 Anticodon-binding domain of tRNA GII89_15160 PF10458 Valyl tRNA synthetase tRNA binding arm GII89_15160 PF00133 tRNA synthetases class I (I, L, M and V) GII89_15175 PF01476 LysM domain GII89_15180 PF00202 Aminotransferase class-III GII89_15185 PF00490 Delta-aminolevulinic acid dehydratase GII89_15190 PF02602 Uroporphyrinogen-III synthase HemD GII89_15195 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain GII89_15195 PF03900 Porphobilinogen deaminase, C-terminal domain GII89_15200 PF01578 Cytochrome C assembly protein GII89_15205 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain GII89_15205 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain GII89_15205 PF01488 Shikimate / quinate 5-dehydrogenase GII89_15215 PF01926 50S ribosome-binding GTPase GII89_15220 PF02190 ATP-dependent protease La (LON) substrate-binding domain GII89_15220 PF05362 Lon protease (S16) C-terminal proteolytic domain GII89_15220 PF00004 ATPase family associated with various cellular activities (AAA) GII89_15225 PF05362 Lon protease (S16) C-terminal proteolytic domain GII89_15225 PF00004 ATPase family associated with various cellular activities (AAA) GII89_15230 PF06689 ClpX C4-type zinc finger GII89_15230 PF10431 C-terminal, D2-small domain, of ClpB protein GII89_15230 PF07724 AAA domain (Cdc48 subfamily) GII89_15235 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase GII89_15235 PF05697 Bacterial trigger factor protein (TF) GII89_15235 PF05698 Bacterial trigger factor protein (TF) C-terminus GII89_15245 PF00694 Aconitase C-terminal domain GII89_15250 PF00330 Aconitase family (aconitate hydratase) GII89_15255 PF00180 Isocitrate/isopropylmalate dehydrogenase GII89_15260 PF08502 LeuA allosteric (dimerisation) domain GII89_15260 PF00682 HMGL-like GII89_15265 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain GII89_15265 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain GII89_15270 PF10369 Small subunit of acetolactate synthase GII89_15270 PF01842 ACT domain GII89_15275 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain GII89_15275 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain GII89_15275 PF00205 Thiamine pyrophosphate enzyme, central domain GII89_15285 PF00583 Acetyltransferase (GNAT) family GII89_15290 PF09557 Domain of unknown function (DUF2382) GII89_15290 PF11181 Heat induced stress protein YflT GII89_15300 PF12850 Calcineurin-like phosphoesterase superfamily domain GII89_15305 PF01725 Ham1 family GII89_15310 PF01138 3' exoribonuclease family, domain 1 GII89_15310 PF03725 3' exoribonuclease family, domain 2 GII89_15315 PF10646 Sporulation and spore germination GII89_15320 PF01177 Asp/Glu/Hydantoin racemase GII89_15325 PF01047 MarR family GII89_15330 PF00196 Bacterial regulatory proteins, luxR family GII89_15335 PF03061 Thioesterase superfamily GII89_15340 PF13085 2Fe-2S iron-sulfur cluster binding domain GII89_15340 PF13183 4Fe-4S dicluster domain GII89_15345 PF02910 Fumarate reductase flavoprotein C-term GII89_15345 PF00890 FAD binding domain GII89_15350 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit GII89_15355 PF10702 Protein of unknown function (DUF2507) GII89_15360 PF00696 Amino acid kinase family GII89_15360 PF01842 ACT domain GII89_15360 PF13840 ACT domain GII89_15365 PF01541 GIY-YIG catalytic domain GII89_15365 PF02151 UvrB/uvrC motif GII89_15365 PF08459 UvrC Helix-hairpin-helix N-terminal GII89_15370 PF00085 Thioredoxin GII89_15375 PF06964 Alpha-L-arabinofuranosidase C-terminal domain GII89_15380 PF00766 Electron transfer flavoprotein FAD-binding domain GII89_15380 PF01012 Electron transfer flavoprotein domain GII89_15385 PF01012 Electron transfer flavoprotein domain GII89_15390 PF00378 Enoyl-CoA hydratase/isomerase GII89_15395 PF00440 Bacterial regulatory proteins, tetR family GII89_15395 PF08359 YsiA-like protein, C-terminal region GII89_15400 PF00501 AMP-binding enzyme GII89_15400 PF13193 AMP-binding enzyme C-terminal domain GII89_15405 PF03994 Domain of Unknown Function (DUF350) GII89_15410 PF01713 Smr domain GII89_15410 PF00488 MutS domain V GII89_15415 PF02811 PHP domain GII89_15415 PF14716 Helix-hairpin-helix domain GII89_15415 PF14791 DNA polymerase beta thumb GII89_15420 PF02674 Colicin V production protein GII89_15425 PF05164 Cell division protein ZapA GII89_15430 PF01351 Ribonuclease HII GII89_15430 PF11858 Domain of unknown function (DUF3378) GII89_15435 PF03147 Ferredoxin-fold anticodon binding domain GII89_15435 PF03484 tRNA synthetase B5 domain GII89_15435 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain GII89_15435 PF01588 Putative tRNA binding domain GII89_15435 PF03483 B3/4 domain GII89_15440 PF01409 tRNA synthetases class II core domain (F) GII89_15440 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain GII89_15450 PF00588 SpoU rRNA Methylase family GII89_15450 PF08032 RNA 2'-O ribose methyltransferase substrate binding GII89_15455 PF14098 Small, acid-soluble spore protein I GII89_15460 PF13556 PucR C-terminal helix-turn-helix domain GII89_15460 PF17853 GGDEF-like domain GII89_15460 PF05651 Putative sugar diacid recognition GII89_15465 PF01565 FAD binding domain GII89_15465 PF02913 FAD linked oxidases, C-terminal domain GII89_15470 PF02754 Cysteine-rich domain GII89_15470 PF13183 4Fe-4S dicluster domain GII89_15475 PF12681 Glyoxalase-like domain GII89_15485 PF02554 Carbon starvation protein CstA GII89_15485 PF13722 5TM C-terminal transporter carbon starvation CstA GII89_15490 PF06964 Alpha-L-arabinofuranosidase C-terminal domain GII89_15495 PF00528 Binding-protein-dependent transport system inner membrane component GII89_15500 PF00528 Binding-protein-dependent transport system inner membrane component GII89_15505 PF01547 Bacterial extracellular solute-binding protein GII89_15510 PF13685 Iron-containing alcohol dehydrogenase GII89_15515 PF13344 Haloacid dehalogenase-like hydrolase GII89_15520 PF00596 Class II Aldolase and Adducin N-terminal domain GII89_15525 PF02782 FGGY family of carbohydrate kinases, C-terminal domain GII89_15525 PF00370 FGGY family of carbohydrate kinases, N-terminal domain GII89_15530 PF02610 L-arabinose isomerase GII89_15530 PF11762 L-arabinose isomerase C-terminal domain GII89_15535 PF04616 Glycosyl hydrolases family 43 GII89_15540 PF05343 M42 glutamyl aminopeptidase GII89_15550 PF06961 Protein of unknown function (DUF1294) GII89_15555 PF00453 Ribosomal protein L20 GII89_15560 PF01632 Ribosomal protein L35 GII89_15565 PF00707 Translation initiation factor IF-3, C-terminal domain GII89_15565 PF05198 Translation initiation factor IF-3, N-terminal domain GII89_15575 PF04172 LrgB-like family GII89_15580 PF03788 LrgA family GII89_15585 PF00072 Response regulator receiver domain GII89_15585 PF04397 LytTr DNA-binding domain GII89_15590 PF07694 5TMR of 5TMR-LYT GII89_15590 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GII89_15590 PF06580 Histidine kinase GII89_15600 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) GII89_15600 PF02824 TGS domain GII89_15600 PF03129 Anticodon binding domain GII89_15600 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain GII89_15605 PF08812 YtxC-like family GII89_15610 PF09335 SNARE associated Golgi protein GII89_15615 PF01695 IstB-like ATP binding protein GII89_15615 PF07319 Primosomal protein DnaI N-terminus GII89_15620 PF07261 Replication initiation and membrane attachment GII89_15625 PF03477 ATP cone domain GII89_15630 PF02675 S-adenosylmethionine decarboxylase GII89_15635 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain GII89_15635 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain GII89_15640 PF01638 HxlR-like helix-turn-helix GII89_15645 PF07690 Major Facilitator Superfamily GII89_15650 PF00248 Aldo/keto reductase family GII89_15655 PF01121 Dephospho-CoA kinase GII89_15660 PF02659 Putative manganese efflux pump GII89_15665 PF06827 Zinc finger found in FPG and IleRS GII89_15665 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain GII89_15665 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain GII89_15670 PF01367 5'-3' exonuclease, C-terminal SAM fold GII89_15670 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain GII89_15670 PF00476 DNA polymerase family A GII89_15675 PF00989 PAS fold GII89_15675 PF16736 Single Cache-like GII89_15675 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GII89_15675 PF00512 His Kinase A (phospho-acceptor) domain GII89_15680 PF00486 Transcriptional regulatory protein, C terminal GII89_15680 PF00072 Response regulator receiver domain GII89_15685 PF00056 lactate/malate dehydrogenase, NAD binding domain GII89_15685 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain GII89_15690 PF00180 Isocitrate/isopropylmalate dehydrogenase GII89_15695 PF00285 Citrate synthase, C-terminal domain GII89_15700 PF04284 Protein of unknown function (DUF441) GII89_15705 PF01594 AI-2E family transporter GII89_15710 PF04186 FxsA cytoplasmic membrane protein GII89_15715 PF02887 Pyruvate kinase, alpha/beta domain GII89_15715 PF00224 Pyruvate kinase, barrel domain GII89_15715 PF00391 PEP-utilising enzyme, mobile domain GII89_15720 PF00365 Phosphofructokinase GII89_15725 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit GII89_15730 PF17848 Acetyl-coA carboxylase zinc finger domain GII89_15730 PF01039 Carboxyl transferase domain GII89_15735 PF03949 Malic enzyme, NAD binding domain GII89_15735 PF00390 Malic enzyme, N-terminal domain GII89_15740 PF01336 OB-fold nucleic acid binding domain GII89_15740 PF02811 PHP domain GII89_15740 PF14579 Helix-hairpin-helix motif GII89_15740 PF07733 Bacterial DNA polymerase III alpha NTPase domain GII89_15740 PF17657 Bacterial DNA polymerase III alpha subunit finger domain GII89_15745 PF14034 Sporulation protein YtrH GII89_15760 PF02272 DHHA1 domain GII89_15760 PF01368 DHH family GII89_15765 PF14007 YtpI-like protein GII89_15770 PF03061 Thioesterase superfamily GII89_15770 PF00392 Bacterial regulatory proteins, gntR family GII89_15770 PF07085 DRTGG domain GII89_15770 PF00571 CBS domain GII89_15775 PF01925 Sulfite exporter TauE/SafE GII89_15780 PF01546 Peptidase family M20/M25/M40 GII89_15780 PF07687 Peptidase dimerisation domain GII89_15785 PF01687 Riboflavin kinase GII89_15790 PF00296 Luciferase-like monooxygenase GII89_15795 PF00462 Glutaredoxin GII89_15800 PF00296 Luciferase-like monooxygenase GII89_15805 PF00005 ABC transporter GII89_15810 PF00528 Binding-protein-dependent transport system inner membrane component GII89_15815 PF00528 Binding-protein-dependent transport system inner membrane component GII89_15820 PF00497 Bacterial extracellular solute-binding proteins, family 3 GII89_15825 PF00497 Bacterial extracellular solute-binding proteins, family 3 GII89_15830 PF00583 Acetyltransferase (GNAT) family GII89_15835 PF03466 LysR substrate binding domain GII89_15835 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GII89_15855 PF14698 Argininosuccinate lyase C-terminal GII89_15855 PF00206 Lyase GII89_15860 PF00764 Arginosuccinate synthase GII89_15865 PF00994 Probable molybdopterin binding domain GII89_15870 PF00871 Acetokinase family GII89_15880 PF02384 N-6 DNA Methylase GII89_15885 PF08534 Redoxin GII89_15890 PF09579 Sporulation protein YtfJ (Spore_YtfJ) GII89_15895 PF11167 Protein of unknown function (DUF2953) GII89_15900 PF06271 RDD family GII89_15905 PF01343 Peptidase family S49 GII89_15910 PF01513 ATP-NAD kinase GII89_15915 PF07969 Amidohydrolase family GII89_15920 PF13193 AMP-binding enzyme C-terminal domain GII89_15920 PF00501 AMP-binding enzyme GII89_15925 PF00269 Small, acid-soluble spore proteins, alpha/beta type GII89_15930 PF02926 THUMP domain GII89_15930 PF02568 Thiamine biosynthesis protein (ThiI) GII89_15935 PF00266 Aminotransferase class-V GII89_15940 PF05525 Branched-chain amino acid transport protein GII89_15945 PF06160 Septation ring formation regulator, EzrA GII89_15950 PF02811 PHP domain GII89_15955 PF00440 Bacterial regulatory proteins, tetR family GII89_15960 PF13185 GAF domain GII89_15965 PF00990 Diguanylate cyclase, GGDEF domain GII89_15975 PF00163 Ribosomal protein S4/S9 N-terminal domain GII89_15975 PF01479 S4 domain GII89_15980 PF01479 S4 domain GII89_15980 PF00579 tRNA synthetases class I (W and Y) GII89_15985 PF13193 AMP-binding enzyme C-terminal domain GII89_15985 PF00501 AMP-binding enzyme GII89_15990 PF00583 Acetyltransferase (GNAT) family GII89_15995 PF00571 CBS domain GII89_16000 PF00850 Histone deacetylase domain GII89_16005 PF00691 OmpA family GII89_16005 PF13677 Membrane MotB of proton-channel complex MotA/MotB GII89_16010 PF01618 MotA/TolQ/ExbB proton channel family GII89_16015 PF00356 Bacterial regulatory proteins, lacI family GII89_16020 PF01817 Chorismate mutase type II GII89_16020 PF00793 DAHP synthetase I family GII89_16025 PF11009 Protein of unknown function (DUF2847) GII89_16030 PF12732 YtxH-like protein GII89_16035 PF06103 Bacterial protein of unknown function (DUF948) GII89_16040 PF08245 Mur ligase middle domain GII89_16040 PF02875 Mur ligase family, glutamate ligase domain GII89_16040 PF01225 Mur ligase family, catalytic domain GII89_16045 PF01580 FtsK/SpoIIIE family GII89_16045 PF09397 Ftsk gamma domain GII89_16045 PF17854 FtsK alpha domain GII89_16050 PF14794 Domain of unknown function (DUF4479) GII89_16050 PF01588 Putative tRNA binding domain GII89_16055 PF07285 Protein of unknown function (DUF1444) GII89_16060 PF00085 Thioredoxin GII89_16070 PF11071 Nucleoside 2-deoxyribosyltransferase YtoQ GII89_16075 PF05343 M42 glutamyl aminopeptidase GII89_16080 PF03413 Peptidase propeptide and YPEB domain GII89_16085 PF00390 Malic enzyme, N-terminal domain GII89_16085 PF03949 Malic enzyme, NAD binding domain GII89_16090 PF00753 Metallo-beta-lactamase superfamily GII89_16095 PF02390 Putative methyltransferase GII89_16100 PF14165 YtzH-like protein GII89_16105 PF01636 Phosphotransferase enzyme family GII89_16110 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) GII89_16110 PF00128 Alpha amylase, catalytic domain GII89_16110 PF17999 Pullulanase N1-terminal domain GII89_16115 PF00781 Diacylglycerol kinase catalytic domain GII89_16130 PF00291 Pyridoxal-phosphate dependent enzyme GII89_16135 PF01546 Peptidase family M20/M25/M40 GII89_16140 PF00860 Permease family GII89_16145 PF05975 Bacterial ABC transporter protein EcsB GII89_16150 PF00005 ABC transporter GII89_16155 PF08220 DeoR-like helix-turn-helix domain GII89_16160 PF00849 RNA pseudouridylate synthase GII89_16160 PF01479 S4 domain GII89_16165 PF14667 Polysaccharide biosynthesis C-terminal domain GII89_16165 PF01943 Polysaccharide biosynthesis protein GII89_16175 PF02028 BCCT, betaine/carnitine/choline family transporter GII89_16180 PF10957 Sporulation protein Cse60 GII89_16185 PF04854 Protein of unknown function, DUF624 GII89_16190 PF02894 Oxidoreductase family, C-terminal alpha/beta domain GII89_16190 PF01408 Oxidoreductase family, NAD-binding Rossmann fold GII89_16200 PF07470 Glycosyl Hydrolase Family 88 GII89_16205 PF00528 Binding-protein-dependent transport system inner membrane component GII89_16210 PF17853 GGDEF-like domain GII89_16210 PF12833 Helix-turn-helix domain GII89_16215 PF13416 Bacterial extracellular solute-binding protein GII89_16220 PF00528 Binding-protein-dependent transport system inner membrane component GII89_16225 PF01370 NAD dependent epimerase/dehydratase family GII89_16230 PF00067 Cytochrome P450 GII89_16235 PF06968 Biotin and Thiamin Synthesis associated domain GII89_16235 PF04055 Radical SAM superfamily GII89_16245 PF00155 Aminotransferase class I and II GII89_16250 PF00202 Aminotransferase class-III GII89_16255 PF03744 6-carboxyhexanoate--CoA ligase GII89_16260 PF01738 Dienelactone hydrolase family GII89_16285 PF11975 Family 4 glycosyl hydrolase C-terminal domain GII89_16285 PF02056 Family 4 glycosyl hydrolase GII89_16290 PF00581 Rhodanese-like domain GII89_16295 PF00133 tRNA synthetases class I (I, L, M and V) GII89_16295 PF13603 Leucyl-tRNA synthetase, Domain 2 GII89_16295 PF09334 tRNA synthetases class I (M) GII89_16295 PF08264 Anticodon-binding domain of tRNA GII89_16300 PF14074 Protein of unknown function (DUF4257) GII89_16305 PF01740 STAS domain GII89_16305 PF13426 PAS domain GII89_16310 PF07690 Major Facilitator Superfamily GII89_16315 PF04791 LMBR1-like membrane protein GII89_16320 PF02687 FtsX-like permease family GII89_16325 PF00005 ABC transporter GII89_16330 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GII89_16335 PF00072 Response regulator receiver domain GII89_16335 PF00486 Transcriptional regulatory protein, C terminal GII89_16340 PF02687 FtsX-like permease family GII89_16340 PF12704 MacB-like periplasmic core domain GII89_16345 PF00005 ABC transporter GII89_16360 PF00005 ABC transporter GII89_16365 PF00392 Bacterial regulatory proteins, gntR family GII89_16375 PF10732 Protein of unknown function (DUF2524) GII89_16380 PF04055 Radical SAM superfamily GII89_16380 PF16199 Radical_SAM C-terminal domain GII89_16385 PF06962 Putative rRNA methylase GII89_16390 PF10776 Protein of unknown function (DUF2600) GII89_16395 PF12146 Serine aminopeptidase, S33 GII89_16400 PF00132 Bacterial transferase hexapeptide (six repeats) GII89_16405 PF00324 Amino acid permease GII89_16410 PF13537 Glutamine amidotransferase domain GII89_16410 PF00733 Asparagine synthase GII89_16415 PF00438 S-adenosylmethionine synthetase, N-terminal domain GII89_16415 PF02772 S-adenosylmethionine synthetase, central domain GII89_16415 PF02773 S-adenosylmethionine synthetase, C-terminal domain GII89_16420 PF01293 Phosphoenolpyruvate carboxykinase GII89_16425 PF10763 Protein of unknown function (DUF2584) GII89_16430 PF00326 Prolyl oligopeptidase family GII89_16440 PF00005 ABC transporter GII89_16445 PF00528 Binding-protein-dependent transport system inner membrane component GII89_16450 PF00293 NUDIX domain GII89_16455 PF05105 Bacteriophage holin family GII89_16460 PF00210 Ferritin-like domain GII89_16470 PF13115 YtkA-like GII89_16475 PF02664 S-Ribosylhomocysteinase (LuxS) GII89_16480 PF01809 Putative membrane protein insertion efficiency factor GII89_16485 PF00484 Carbonic anhydrase GII89_16490 PF01197 Ribosomal protein L31 GII89_16495 PF01654 Cytochrome bd terminal oxidase subunit I GII89_16500 PF02322 Cytochrome bd terminal oxidase subunit II GII89_16505 PF07561 Domain of Unknown Function (DUF1540) GII89_16510 PF00950 ABC 3 transport family GII89_16515 PF00950 ABC 3 transport family GII89_16520 PF00005 ABC transporter GII89_16525 PF01297 Zinc-uptake complex component A periplasmic GII89_16530 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain GII89_16530 PF13378 Enolase C-terminal domain-like GII89_16535 PF00501 AMP-binding enzyme GII89_16535 PF13193 AMP-binding enzyme C-terminal domain GII89_16540 PF00378 Enoyl-CoA hydratase/isomerase GII89_16545 PF00561 alpha/beta hydrolase fold GII89_16550 PF16582 Middle domain of thiamine pyrophosphate GII89_16550 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain GII89_16550 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain GII89_16555 PF00425 chorismate binding enzyme GII89_16560 PF01258 Prokaryotic dksA/traR C4-type zinc finger GII89_16565 PF00483 Nucleotidyl transferase GII89_16570 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain GII89_16570 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain GII89_16570 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain GII89_16575 PF01370 NAD dependent epimerase/dehydratase family GII89_16580 PF00534 Glycosyl transferases group 1 GII89_16580 PF13439 Glycosyltransferase Family 4 GII89_16595 PF00534 Glycosyl transferases group 1 GII89_16595 PF13439 Glycosyltransferase Family 4 GII89_16600 PF01636 Phosphotransferase enzyme family GII89_16605 PF03073 TspO/MBR family GII89_16610 PF00343 Carbohydrate phosphorylase GII89_16615 PF00534 Glycosyl transferases group 1 GII89_16615 PF08323 Starch synthase catalytic domain GII89_16620 PF00483 Nucleotidyl transferase GII89_16625 PF00483 Nucleotidyl transferase GII89_16630 PF00128 Alpha amylase, catalytic domain GII89_16630 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) GII89_16630 PF02806 Alpha amylase, C-terminal all-beta domain GII89_16755 PF09515 Thiamine transporter protein (Thia_YuaJ) GII89_16760 PF00583 Acetyltransferase (GNAT) family GII89_16765 PF01145 SPFH domain / Band 7 family GII89_16765 PF15975 Flotillin GII89_16775 PF12867 DinB superfamily GII89_16785 PF00465 Iron-containing alcohol dehydrogenase GII89_16800 PF17735 Biofilm surface layer A GII89_16805 PF02254 TrkA-N domain GII89_16805 PF02080 TrkA-C domain GII89_16810 PF02386 Cation transport protein GII89_16815 PF05360 yiaA/B two helix domain GII89_16820 PF13457 GW (Gly-Tryp) dipeptide domain GII89_16820 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase GII89_16825 PF07690 Major Facilitator Superfamily GII89_16830 PF05995 Cysteine dioxygenase type I GII89_16840 PF02673 Bacitracin resistance protein BacA GII89_16845 PF01594 AI-2E family transporter GII89_16850 PF02894 Oxidoreductase family, C-terminal alpha/beta domain GII89_16850 PF01408 Oxidoreductase family, NAD-binding Rossmann fold GII89_16855 PF06134 L-rhamnose isomerase (RhaA) GII89_16860 PF05336 L-rhamnose mutarotase GII89_16865 PF02782 FGGY family of carbohydrate kinases, C-terminal domain GII89_16865 PF00370 FGGY family of carbohydrate kinases, N-terminal domain GII89_16870 PF00455 DeoR C terminal sensor domain GII89_16870 PF08220 DeoR-like helix-turn-helix domain GII89_16875 PF00596 Class II Aldolase and Adducin N-terminal domain GII89_16880 PF02743 Cache domain GII89_16880 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GII89_16880 PF00672 HAMP domain GII89_16885 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GII89_16885 PF00672 HAMP domain GII89_16885 PF02743 Cache domain GII89_16890 PF02743 Cache domain GII89_16890 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GII89_16890 PF00672 HAMP domain GII89_16895 PF02743 Cache domain GII89_16895 PF00672 HAMP domain GII89_16895 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GII89_16910 PF01894 Uncharacterised protein family UPF0047 GII89_16920 PF16657 Maltogenic Amylase, C-terminal domain GII89_16920 PF00128 Alpha amylase, catalytic domain GII89_16925 PF01595 Cyclin M transmembrane N-terminal domain GII89_16925 PF03471 Transporter associated domain GII89_16925 PF00571 CBS domain GII89_16930 PF04298 Putative neutral zinc metallopeptidase GII89_16940 PF11458 Membrane-integrating protein Mistic GII89_16945 PF02254 TrkA-N domain GII89_16945 PF07885 Ion channel GII89_16950 PF08868 YugN-like family GII89_16960 PF00342 Phosphoglucose isomerase GII89_16965 PF00465 Iron-containing alcohol dehydrogenase GII89_16970 PF00465 Iron-containing alcohol dehydrogenase GII89_16975 PF04070 Domain of unknown function (DUF378) GII89_16980 PF00575 S1 RNA binding domain GII89_16985 PF00155 Aminotransferase class I and II GII89_16990 PF01037 Lrp/AsnC ligand binding domain GII89_16995 PF08386 TAP-like protein GII89_16995 PF00561 alpha/beta hydrolase fold GII89_17000 PF08958 Domain of unknown function (DUF1871) GII89_17005 PF00155 Aminotransferase class I and II GII89_17010 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GII89_17010 PF00512 His Kinase A (phospho-acceptor) domain GII89_17015 PF08810 Kinase associated protein B GII89_17020 PF00929 Exonuclease GII89_17030 PF07690 Major Facilitator Superfamily GII89_17035 PF00905 Penicillin binding protein transpeptidase domain GII89_17035 PF00912 Transglycosylase GII89_17040 PF04134 Protein of unknown function, DUF393 GII89_17045 PF17328 Family of unknown function (DUF5366) GII89_17050 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GII89_17050 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain GII89_17050 PF17203 Single cache domain 3 GII89_17050 PF00989 PAS fold GII89_17055 PF00072 Response regulator receiver domain GII89_17080 PF03390 2-hydroxycarboxylate transporter family GII89_17090 PF13244 Domain of unknown function (DUF4040) GII89_17090 PF00361 Proton-conducting membrane transporter GII89_17090 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus GII89_17095 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter GII89_17100 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L GII89_17105 PF00361 Proton-conducting membrane transporter GII89_17110 PF01899 Na+/H+ ion antiporter subunit GII89_17115 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) GII89_17120 PF03334 Na+/H+ antiporter subunit GII89_17125 PF03061 Thioesterase superfamily GII89_17130 PF00072 Response regulator receiver domain GII89_17130 PF00196 Bacterial regulatory proteins, luxR family GII89_17135 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GII89_17135 PF07730 Histidine kinase GII89_17145 PF00348 Polyprenyl synthetase GII89_17150 PF08181 DegQ (SacQ) family GII89_17165 PF00563 EAL domain GII89_17165 PF08668 HDOD domain GII89_17170 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain GII89_17170 PF17956 Nicotinate phosphoribosyltransferase C-terminal domain GII89_17170 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family GII89_17175 PF00857 Isochorismatase family GII89_17180 PF07997 Protein of unknown function (DUF1694) GII89_17185 PF14166 YueH-like protein GII89_17190 PF10676 Spore germination protein gerPA/gerPF GII89_17195 PF01594 AI-2E family transporter GII89_17200 PF10049 Protein of unknown function (DUF2283) GII89_17205 PF10842 Protein of unknown function (DUF2642) GII89_17210 PF01966 HD domain GII89_17215 PF00106 short chain dehydrogenase GII89_17220 PF17355 Family of unknown function (DUF5383) GII89_17230 PF01580 FtsK/SpoIIIE family GII89_17230 PF12538 DNA transporter GII89_17235 PF10140 WXG100 protein secretion system (Wss), protein YukC GII89_17240 PF08817 WXG100 protein secretion system (Wss), protein YukD GII89_17245 PF06013 Proteins of 100 residues with WXG GII89_17250 PF13556 PucR C-terminal helix-turn-helix domain GII89_17250 PF06018 CodY GAF-like domain GII89_17250 PF17853 GGDEF-like domain GII89_17255 PF05222 Alanine dehydrogenase/PNT, N-terminal domain GII89_17255 PF01262 Alanine dehydrogenase/PNT, C-terminal domain GII89_17260 PF10042 Uncharacterized conserved protein (DUF2278) GII89_17265 PF03621 MbtH-like protein GII89_17270 PF00975 Thioesterase domain GII89_17270 PF00501 AMP-binding enzyme GII89_17270 PF00668 Condensation domain GII89_17270 PF00550 Phosphopantetheine attachment site GII89_17270 PF13193 AMP-binding enzyme C-terminal domain GII89_17275 PF00857 Isochorismatase family GII89_17275 PF00550 Phosphopantetheine attachment site GII89_17280 PF00501 AMP-binding enzyme GII89_17280 PF13193 AMP-binding enzyme C-terminal domain GII89_17285 PF00425 chorismate binding enzyme GII89_17290 PF00106 short chain dehydrogenase GII89_17295 PF00756 Putative esterase GII89_17300 PF00174 Oxidoreductase molybdopterin binding domain GII89_17305 PF02632 BioY family GII89_17310 PF13726 Na+-H+ antiporter family GII89_17310 PF03553 Na+/H+ antiporter family GII89_17315 PF02789 Cytosol aminopeptidase family, N-terminal domain GII89_17315 PF00883 Cytosol aminopeptidase family, catalytic domain GII89_17320 PF02681 Divergent PAP2 family GII89_17325 PF06725 3D domain GII89_17330 PF14068 Putative membrane protein GII89_17335 PF17302 Family of unknown function (DUF5351) GII89_17340 PF07992 Pyridine nucleotide-disulphide oxidoreductase GII89_17345 PF07992 Pyridine nucleotide-disulphide oxidoreductase GII89_17355 PF00478 IMP dehydrogenase / GMP reductase domain GII89_17360 PF04299 Putative FMN-binding domain GII89_17365 PF00583 Acetyltransferase (GNAT) family GII89_17370 PF01521 Iron-sulphur cluster biosynthesis GII89_17375 PF01678 Diaminopimelate epimerase GII89_17380 PF07662 Na+ dependent nucleoside transporter C-terminus GII89_17380 PF01773 Na+ dependent nucleoside transporter N-terminus GII89_17385 PF07293 Protein of unknown function (DUF1450) GII89_17390 PF07992 Pyridine nucleotide-disulphide oxidoreductase GII89_17395 PF07315 Protein of unknown function (DUF1462) GII89_17400 PF01106 NifU-like domain GII89_17405 PF07676 WD40-like Beta Propeller Repeat GII89_17405 PF00326 Prolyl oligopeptidase family GII89_17410 PF00288 GHMP kinases N terminal domain GII89_17410 PF08544 GHMP kinases C terminal GII89_17415 PF00291 Pyridoxal-phosphate dependent enzyme GII89_17420 PF01842 ACT domain GII89_17420 PF00742 Homoserine dehydrogenase GII89_17420 PF03447 Homoserine dehydrogenase, NAD binding domain GII89_17430 PF04608 Phosphatidylglycerophosphatase A GII89_17435 PF13344 Haloacid dehalogenase-like hydrolase GII89_17440 PF01934 Protein of unknown function DUF86 GII89_17445 PF06265 Protein of unknown function (DUF1027) GII89_17450 PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) GII89_17455 PF04055 Radical SAM superfamily GII89_17455 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family GII89_17460 PF01551 Peptidase family M23 GII89_17465 PF09560 Sporulation protein YunB (Spo_YunB) GII89_17470 PF08827 Domain of unknown function (DUF1805) GII89_17475 PF02872 5'-nucleotidase, C-terminal domain GII89_17480 PF01925 Sulfite exporter TauE/SafE GII89_17485 PF01904 Protein of unknown function DUF72 GII89_17495 PF01979 Amidohydrolase family GII89_17500 PF17853 GGDEF-like domain GII89_17500 PF07905 Purine catabolism regulatory protein-like family GII89_17500 PF13556 PucR C-terminal helix-turn-helix domain GII89_17505 PF00860 Permease family GII89_17510 PF00860 Permease family GII89_17515 PF09349 OHCU decarboxylase GII89_17515 PF01014 Uricase GII89_17520 PF00576 HIUase/Transthyretin family GII89_17525 PF09680 Family of unknown function GII89_17530 PF01799 [2Fe-2S] binding domain GII89_17530 PF00111 2Fe-2S iron-sulfur cluster binding domain GII89_17535 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain GII89_17535 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase GII89_17540 PF00941 FAD binding domain in molybdopterin dehydrogenase GII89_17545 PF12804 MobA-like NTP transferase domain GII89_17550 PF13478 XdhC Rossmann domain GII89_17550 PF02625 XdhC and CoxI family GII89_17555 PF00266 Aminotransferase class-V GII89_17560 PF01546 Peptidase family M20/M25/M40 GII89_17570 PF04231 Endonuclease I GII89_17575 PF03459 TOBE domain GII89_17575 PF00005 ABC transporter GII89_17575 PF17912 MalK OB fold domain GII89_17580 PF00392 Bacterial regulatory proteins, gntR family GII89_17580 PF07702 UTRA domain GII89_17585 PF00294 pfkB family carbohydrate kinase GII89_17590 PF00528 Binding-protein-dependent transport system inner membrane component GII89_17595 PF00528 Binding-protein-dependent transport system inner membrane component GII89_17600 PF01547 Bacterial extracellular solute-binding protein GII89_17605 PF01380 SIS domain GII89_17610 PF01541 GIY-YIG catalytic domain GII89_17615 PF01266 FAD dependent oxidoreductase GII89_17630 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily GII89_17640 PF01458 Uncharacterized protein family (UPF0051) GII89_17645 PF01592 NifU-like N terminal domain GII89_17650 PF00266 Aminotransferase class-V GII89_17655 PF01458 Uncharacterized protein family (UPF0051) GII89_17660 PF00005 ABC transporter GII89_17670 PF02627 Carboxymuconolactone decarboxylase family GII89_17675 PF03180 NLPA lipoprotein GII89_17680 PF00528 Binding-protein-dependent transport system inner membrane component GII89_17685 PF09383 NIL domain GII89_17685 PF00005 ABC transporter GII89_17690 PF02036 SCP-2 sterol transfer family GII89_17695 PF00085 Thioredoxin GII89_17700 PF01751 Toprim domain GII89_17705 PF10830 Protein of unknown function (DUF2553) GII89_17710 PF01597 Glycine cleavage H-protein GII89_17715 PF03960 ArsC family GII89_17720 PF02771 Acyl-CoA dehydrogenase, N-terminal domain GII89_17720 PF02770 Acyl-CoA dehydrogenase, middle domain GII89_17720 PF00441 Acyl-CoA dehydrogenase, C-terminal domain GII89_17725 PF02803 Thiolase, C-terminal domain GII89_17725 PF00108 Thiolase, N-terminal domain GII89_17730 PF00378 Enoyl-CoA hydratase/isomerase GII89_17730 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain GII89_17730 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain GII89_17735 PF14115 YuzL-like protein GII89_17740 PF01619 Proline dehydrogenase GII89_17750 PF07875 Coat F domain GII89_17755 PF01047 MarR family GII89_17760 PF07690 Major Facilitator Superfamily GII89_17765 PF14552 Tautomerase enzyme GII89_17775 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GII89_17775 PF03466 LysR substrate binding domain GII89_17780 PF10835 Protein of unknown function (DUF2573) GII89_17785 PF00005 ABC transporter GII89_17790 PF14039 YusW-like protein GII89_17800 PF00106 short chain dehydrogenase GII89_17805 PF00210 Ferritin-like domain GII89_17810 PF13180 PDZ domain GII89_17815 PF00486 Transcriptional regulatory protein, C terminal GII89_17815 PF00072 Response regulator receiver domain GII89_17820 PF00672 HAMP domain GII89_17820 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GII89_17820 PF00512 His Kinase A (phospho-acceptor) domain GII89_17830 PF00440 Bacterial regulatory proteins, tetR family GII89_17835 PF10415 Fumarase C C-terminus GII89_17835 PF00206 Lyase GII89_17840 PF13113 Protein of unknown function (DUF3970) GII89_17845 PF03323 Bacillus/Clostridium GerA spore germination protein GII89_17850 PF03845 Spore germination protein GII89_17855 PF05504 Spore germination B3/ GerAC like, C-terminal GII89_17860 PF00196 Bacterial regulatory proteins, luxR family GII89_17860 PF00072 Response regulator receiver domain GII89_17865 PF00672 HAMP domain GII89_17865 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GII89_17865 PF07730 Histidine kinase GII89_17870 PF09922 Cell wall-active antibiotics response 4TMS YvqF GII89_17875 PF13349 Putative adhesin GII89_17880 PF04012 PspA/IM30 family GII89_17890 PF07690 Major Facilitator Superfamily GII89_17895 PF01923 Cobalamin adenosyltransferase GII89_17900 PF00005 ABC transporter GII89_17905 PF01032 FecCD transport family GII89_17910 PF01497 Periplasmic binding protein GII89_17915 PF00106 short chain dehydrogenase GII89_17920 PF08450 SMP-30/Gluconolactonase/LRE-like region GII89_17925 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GII89_17925 PF00512 His Kinase A (phospho-acceptor) domain GII89_17930 PF00072 Response regulator receiver domain GII89_17930 PF00486 Transcriptional regulatory protein, C terminal GII89_17940 PF04545 Sigma-70, region 4 GII89_17945 PF12841 YvrJ protein family GII89_17950 PF00190 Cupin GII89_17955 PF14184 Regulatory protein YrvL GII89_17960 PF12704 MacB-like periplasmic core domain GII89_17960 PF02687 FtsX-like permease family GII89_17965 PF00005 ABC transporter GII89_17970 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion GII89_17975 PF00005 ABC transporter GII89_17980 PF01032 FecCD transport family GII89_17985 PF01032 FecCD transport family GII89_17990 PF01497 Periplasmic binding protein GII89_17995 PF13520 Amino acid permease GII89_18000 PF09575 Small spore protein J (Spore_SspJ) GII89_18005 PF04307 LexA-binding, inner membrane-associated putative hydrolase GII89_18010 PF00884 Sulfatase GII89_18015 PF12728 Helix-turn-helix domain GII89_18015 PF12727 PBP superfamily domain GII89_18025 PF00528 Binding-protein-dependent transport system inner membrane component GII89_18030 PF00248 Aldo/keto reductase family GII89_18040 PF00999 Sodium/hydrogen exchanger family GII89_18045 PF01077 Nitrite and sulphite reductase 4Fe-4S domain GII89_18045 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain GII89_18050 PF00258 Flavodoxin GII89_18050 PF00667 FAD binding domain GII89_18050 PF00175 Oxidoreductase NAD-binding domain GII89_18055 PF13538 UvrD-like helicase C-terminal domain GII89_18060 PF03458 UPF0126 domain GII89_18065 PF02600 Disulfide bond formation protein DsbB GII89_18070 PF13462 Thioredoxin GII89_18075 PF00403 Heavy-metal-associated domain GII89_18080 PF00403 Heavy-metal-associated domain GII89_18085 PF00403 Heavy-metal-associated domain GII89_18090 PF02583 Metal-sensitive transcriptional repressor GII89_18095 PF01408 Oxidoreductase family, NAD-binding Rossmann fold GII89_18095 PF02894 Oxidoreductase family, C-terminal alpha/beta domain GII89_18100 PF02525 Flavodoxin-like fold GII89_18110 PF17314 Family of unknown function (DUF5360) GII89_18115 PF00893 Small Multidrug Resistance protein GII89_18120 PF00440 Bacterial regulatory proteins, tetR family GII89_18125 PF00106 short chain dehydrogenase GII89_18135 PF01668 SmpB protein GII89_18140 PF17876 Cold shock domain GII89_18140 PF00575 S1 RNA binding domain GII89_18140 PF08206 Ribonuclease B OB domain GII89_18140 PF00773 RNB domain GII89_18145 PF12146 Serine aminopeptidase, S33 GII89_18150 PF03840 Preprotein translocase SecG subunit GII89_18155 PF00561 alpha/beta hydrolase fold GII89_18160 PF01381 Helix-turn-helix GII89_18175 PF01638 HxlR-like helix-turn-helix GII89_18180 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GII89_18180 PF00672 HAMP domain GII89_18180 PF12729 Four helix bundle sensory module for signal transduction GII89_18185 PF00528 Binding-protein-dependent transport system inner membrane component GII89_18190 PF04069 Substrate binding domain of ABC-type glycine betaine transport system GII89_18195 PF00528 Binding-protein-dependent transport system inner membrane component GII89_18200 PF00005 ABC transporter GII89_18200 PF00571 CBS domain GII89_18205 PF12802 MarR family GII89_18210 PF17418 Sporulation delaying protein SdpA GII89_18215 PF05090 Vitamin K-dependent gamma-carboxylase GII89_18225 PF07853 Protein of unknown function (DUF1648) GII89_18225 PF13630 SdpI/YhfL protein family GII89_18230 PF01022 Bacterial regulatory protein, arsR family GII89_18235 PF00528 Binding-protein-dependent transport system inner membrane component GII89_18240 PF04069 Substrate binding domain of ABC-type glycine betaine transport system GII89_18245 PF00528 Binding-protein-dependent transport system inner membrane component GII89_18250 PF00005 ABC transporter GII89_18250 PF00571 CBS domain GII89_18255 PF12802 MarR family GII89_18260 PF01914 MarC family integral membrane protein GII89_18265 PF11724 YvbH-like oligomerisation region GII89_18265 PF08000 Bacterial PH domain GII89_18275 PF13240 zinc-ribbon domain GII89_18280 PF00583 Acetyltransferase (GNAT) family GII89_18285 PF03952 Enolase, N-terminal domain GII89_18285 PF00113 Enolase, C-terminal TIM barrel domain GII89_18290 PF01676 Metalloenzyme superfamily GII89_18290 PF06415 BPG-independent PGAM N-terminus (iPGM_N) GII89_18295 PF00121 Triosephosphate isomerase GII89_18300 PF00162 Phosphoglycerate kinase GII89_18305 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain GII89_18305 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain GII89_18310 PF04198 Putative sugar-binding domain GII89_18315 PF00083 Sugar (and other) transporter GII89_18320 PF00392 Bacterial regulatory proteins, gntR family GII89_18325 PF00296 Luciferase-like monooxygenase GII89_18330 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GII89_18330 PF03466 LysR substrate binding domain GII89_18335 PF00892 EamA-like transporter family GII89_18340 PF00324 Amino acid permease GII89_18345 PF00704 Glycosyl hydrolases family 18 GII89_18350 PF02589 LUD domain GII89_18355 PF02589 LUD domain GII89_18355 PF11870 Domain of unknown function (DUF3390) GII89_18355 PF13183 4Fe-4S dicluster domain GII89_18360 PF02754 Cysteine-rich domain GII89_18365 PF00196 Bacterial regulatory proteins, luxR family GII89_18365 PF00072 Response regulator receiver domain GII89_18370 PF07730 Histidine kinase GII89_18370 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GII89_18380 PF00005 ABC transporter GII89_18385 PF12697 Alpha/beta hydrolase family GII89_18390 PF07228 Stage II sporulation protein E (SpoIIE) GII89_18390 PF13426 PAS domain GII89_18395 PF07745 Glycosyl hydrolase family 53 GII89_18400 PF02449 Beta-galactosidase GII89_18400 PF08533 Beta-galactosidase C-terminal domain GII89_18400 PF08532 Beta-galactosidase trimerisation domain GII89_18405 PF00528 Binding-protein-dependent transport system inner membrane component GII89_18410 PF00528 Binding-protein-dependent transport system inner membrane component GII89_18415 PF13416 Bacterial extracellular solute-binding protein GII89_18420 PF00356 Bacterial regulatory proteins, lacI family GII89_18425 PF00392 Bacterial regulatory proteins, gntR family GII89_18425 PF07729 FCD domain GII89_18430 PF02652 L-lactate permease GII89_18435 PF00309 Sigma-54 factor, Activator interacting domain (AID) GII89_18435 PF04552 Sigma-54, DNA binding domain GII89_18435 PF04963 Sigma-54 factor, core binding domain GII89_18440 PF09628 YvfG protein GII89_18445 PF04230 Polysaccharide pyruvyl transferase GII89_18450 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family GII89_18455 PF00132 Bacterial transferase hexapeptide (six repeats) GII89_18455 PF17836 PglD N-terminal domain GII89_18460 PF02397 Bacterial sugar transferase GII89_18465 PF01943 Polysaccharide biosynthesis protein GII89_18465 PF14667 Polysaccharide biosynthesis C-terminal domain GII89_18470 PF00535 Glycosyl transferase family 2 GII89_18475 PF04230 Polysaccharide pyruvyl transferase GII89_18480 PF00535 Glycosyl transferase family 2 GII89_18490 PF00534 Glycosyl transferases group 1 GII89_18490 PF13439 Glycosyltransferase Family 4 GII89_18495 PF00535 Glycosyl transferase family 2 GII89_18500 PF13439 Glycosyltransferase Family 4 GII89_18500 PF00534 Glycosyl transferases group 1 GII89_18505 PF02719 Polysaccharide biosynthesis protein GII89_18510 PF13614 AAA domain GII89_18515 PF02706 Chain length determinant protein GII89_18520 PF01381 Helix-turn-helix GII89_18520 PF08671 Anti-repressor SinI GII89_18525 PF00135 Carboxylesterase family GII89_18535 PF05870 Phenolic acid decarboxylase (PAD) GII89_18545 PF01177 Asp/Glu/Hydantoin racemase GII89_18550 PF11954 Domain of unknown function (DUF3471) GII89_18550 PF00144 Beta-lactamase GII89_18555 PF02435 Levansucrase/Invertase GII89_18560 PF08244 Glycosyl hydrolases family 32 C terminal GII89_18560 PF00251 Glycosyl hydrolases family 32 N-terminal domain GII89_18565 PF13520 Amino acid permease GII89_18570 PF17934 Tetracyclin repressor-like, C-terminal domain GII89_18570 PF00440 Bacterial regulatory proteins, tetR family GII89_18575 PF00893 Small Multidrug Resistance protein GII89_18580 PF00893 Small Multidrug Resistance protein GII89_18585 PF11553 Protein of unknown function (DUF3231) GII89_18590 PF08031 Berberine and berberine like GII89_18590 PF01565 FAD binding domain GII89_18595 PF01734 Patatin-like phospholipase GII89_18605 PF00574 Clp protease GII89_18610 PF13419 Haloacid dehalogenase-like hydrolase GII89_18615 PF16657 Maltogenic Amylase, C-terminal domain GII89_18615 PF00128 Alpha amylase, catalytic domain GII89_18620 PF03633 Glycosyl hydrolase family 65, C-terminal domain GII89_18620 PF03636 Glycosyl hydrolase family 65, N-terminal domain GII89_18620 PF03632 Glycosyl hydrolase family 65 central catalytic domain GII89_18625 PF06691 Protein of unknown function (DUF1189) GII89_18630 PF00528 Binding-protein-dependent transport system inner membrane component GII89_18635 PF00528 Binding-protein-dependent transport system inner membrane component GII89_18640 PF13416 Bacterial extracellular solute-binding protein GII89_18645 PF00128 Alpha amylase, catalytic domain GII89_18645 PF02903 Alpha amylase, N-terminal ig-like domain GII89_18650 PF00356 Bacterial regulatory proteins, lacI family GII89_18655 PF03641 Possible lysine decarboxylase GII89_18660 PF03819 MazG nucleotide pyrophosphohydrolase domain GII89_18665 PF01740 STAS domain GII89_18665 PF00916 Sulfate permease family GII89_18670 PF00484 Carbonic anhydrase GII89_18675 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain GII89_18675 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GII89_18680 PF02687 FtsX-like permease family GII89_18685 PF00005 ABC transporter GII89_18690 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GII89_18695 PF00486 Transcriptional regulatory protein, C terminal GII89_18695 PF00072 Response regulator receiver domain GII89_18705 PF00797 N-acetyltransferase GII89_18710 PF00381 PTS HPr component phosphorylation site GII89_18715 PF02650 WhiA C-terminal HTH domain GII89_18715 PF14527 WhiA LAGLIDADG-like domain GII89_18715 PF10298 WhiA N-terminal LAGLIDADG-like domain GII89_18720 PF01933 Uncharacterised protein family UPF0052 GII89_18725 PF03668 P-loop ATPase protein family GII89_18730 PF00293 NUDIX domain GII89_18735 PF07992 Pyridine nucleotide-disulphide oxidoreductase GII89_18740 PF00877 NlpC/P60 family GII89_18750 PF00005 ABC transporter GII89_18750 PF00664 ABC transporter transmembrane region GII89_18770 PF01502 Phosphoribosyl-AMP cyclohydrolase GII89_18770 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase GII89_18775 PF00977 Histidine biosynthesis protein GII89_18780 PF00977 Histidine biosynthesis protein GII89_18785 PF00117 Glutamine amidotransferase class-I GII89_18790 PF00475 Imidazoleglycerol-phosphate dehydratase GII89_18795 PF00815 Histidinol dehydrogenase GII89_18800 PF01634 ATP phosphoribosyltransferase GII89_18805 PF13393 Histidyl-tRNA synthetase GII89_18810 PF13529 Peptidase_C39 like family GII89_18815 PF03211 Pectate lyase GII89_18820 PF14602 Hexapeptide repeat of succinyl-transferase GII89_18825 PF13419 Haloacid dehalogenase-like hydrolase GII89_18830 PF07670 Nucleoside recognition GII89_18835 PF01790 Prolipoprotein diacylglyceryl transferase GII89_18840 PF07475 HPr Serine kinase C-terminal domain GII89_18840 PF02603 HPr Serine kinase N terminus GII89_18845 PF01979 Amidohydrolase family GII89_18850 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase GII89_18860 PF00149 Calcineurin-like phosphoesterase GII89_18865 PF01047 MarR family GII89_18870 PF00067 Cytochrome P450 GII89_18875 PF16715 Cyclodipeptide synthase GII89_18880 PF01047 MarR family GII89_18885 PF07690 Major Facilitator Superfamily GII89_18890 PF04020 Mycobacterial 4 TMS phage holin, superfamily IV GII89_18895 PF04024 PspC domain GII89_18900 PF13349 Putative adhesin GII89_18920 PF00005 ABC transporter GII89_18920 PF17760 UvrA interaction domain GII89_18920 PF17755 UvrA DNA-binding domain GII89_18925 PF12344 Ultra-violet resistance protein B GII89_18925 PF02151 UvrB/uvrC motif GII89_18925 PF04851 Type III restriction enzyme, res subunit GII89_18925 PF00271 Helicase conserved C-terminal domain GII89_18925 PF17757 UvrB interaction domain GII89_18930 PF09964 Uncharacterized protein conserved in bacteria (DUF2198) GII89_18935 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain GII89_18935 PF00391 PEP-utilising enzyme, mobile domain GII89_18940 PF00440 Bacterial regulatory proteins, tetR family GII89_18945 PF07690 Major Facilitator Superfamily GII89_18950 PF17820 PDZ domain GII89_18955 PF17423 Swarming motility protein GII89_18960 PF03572 Peptidase family S41 GII89_18960 PF01471 Putative peptidoglycan binding domain GII89_18960 PF17820 PDZ domain GII89_18965 PF18075 FtsX extracellular domain GII89_18965 PF02687 FtsX-like permease family GII89_18970 PF00005 ABC transporter GII89_18975 PF13442 Cytochrome C oxidase, cbb3-type, subunit III GII89_18980 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 GII89_18980 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) GII89_18990 PF07517 SecA DEAD-like domain GII89_18990 PF01043 SecA preprotein cross-linking domain GII89_18990 PF02810 SEC-C motif GII89_18990 PF07516 SecA Wing and Scaffold domain GII89_18995 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein GII89_18995 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus GII89_19010 PF02561 Flagellar protein FliS GII89_19015 PF07195 Flagellar hook-associated protein 2 C-terminus GII89_19015 PF07196 Flagellin hook IN motif GII89_19015 PF02465 Flagellar hook-associated protein 2 N-terminus GII89_19020 PF03646 FlaG protein GII89_19025 PF00669 Bacterial flagellin N-terminal helical region GII89_19025 PF00700 Bacterial flagellin C-terminal helical region GII89_19030 PF02599 Global regulator protein family GII89_19035 PF02623 FliW protein GII89_19045 PF00669 Bacterial flagellin N-terminal helical region GII89_19045 PF00700 Bacterial flagellin C-terminal helical region GII89_19050 PF06429 Flagellar basal body rod FlgEFG protein C-terminal GII89_19050 PF00460 Flagella basal body rod protein GII89_19055 PF05130 FlgN protein GII89_19060 PF04316 Anti-sigma-28 factor, FlgM GII89_19075 PF10719 Late competence development protein ComFB GII89_19080 PF04851 Type III restriction enzyme, res subunit GII89_19080 PF00271 Helicase conserved C-terminal domain GII89_19085 PF02645 Uncharacterised protein, DegV family COG1307 GII89_19090 PF00072 Response regulator receiver domain GII89_19090 PF00196 Bacterial regulatory proteins, luxR family GII89_19095 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GII89_19095 PF07730 Histidine kinase GII89_19095 PF05384 Sensor protein DegS GII89_19100 PF09186 Domain of unknown function (DUF1949) GII89_19100 PF01205 Uncharacterized protein family UPF0029 GII89_19105 PF03816 Cell envelope-related transcriptional attenuator domain GII89_19110 PF00953 Glycosyl transferase family 4 GII89_19120 PF00535 Glycosyl transferase family 2 GII89_19125 PF02706 Chain length determinant protein GII89_19130 PF04932 O-Antigen ligase GII89_19135 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain GII89_19135 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain GII89_19135 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain GII89_19140 PF13439 Glycosyltransferase Family 4 GII89_19140 PF00534 Glycosyl transferases group 1 GII89_19145 PF01943 Polysaccharide biosynthesis protein GII89_19145 PF14667 Polysaccharide biosynthesis C-terminal domain GII89_19150 PF02397 Bacterial sugar transferase GII89_19155 PF04122 Putative cell wall binding repeat 2 GII89_19155 PF01520 N-acetylmuramoyl-L-alanine amidase GII89_19160 PF08486 Stage II sporulation protein GII89_19160 PF04122 Putative cell wall binding repeat 2 GII89_19170 PF03816 Cell envelope-related transcriptional attenuator domain GII89_19175 PF02350 UDP-N-acetylglucosamine 2-epimerase GII89_19180 PF00483 Nucleotidyl transferase GII89_19190 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase GII89_19190 PF00535 Glycosyl transferase family 2 GII89_19195 PF00535 Glycosyl transferase family 2 GII89_19205 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase GII89_19215 PF00483 Nucleotidyl transferase GII89_19220 PF00005 ABC transporter GII89_19225 PF01061 ABC-2 type transporter GII89_19230 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase GII89_19235 PF09318 Glycosyl transferase 1 domain A GII89_19235 PF00534 Glycosyl transferases group 1 GII89_19240 PF01467 Cytidylyltransferase-like GII89_19245 PF03808 Glycosyl transferase WecB/TagA/CpsF family GII89_19250 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase GII89_19260 PF05036 Sporulation related domain GII89_19260 PF08239 Bacterial SH3 domain GII89_19260 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase GII89_19265 PF01238 Phosphomannose isomerase type I GII89_19270 PF03323 Bacillus/Clostridium GerA spore germination protein GII89_19275 PF03845 Spore germination protein GII89_19280 PF05504 Spore germination B3/ GerAC like, C-terminal GII89_19285 PF00083 Sugar (and other) transporter GII89_19290 PF03816 Cell envelope-related transcriptional attenuator domain GII89_19300 PF00877 NlpC/P60 family GII89_19310 PF09587 Bacterial capsule synthesis protein PGA_cap GII89_19315 PF14102 Capsule biosynthesis CapC GII89_19320 PF08245 Mur ligase middle domain GII89_19325 PF00356 Bacterial regulatory proteins, lacI family GII89_19330 PF00294 pfkB family carbohydrate kinase GII89_19335 PF05025 RbsD / FucU transport protein family GII89_19340 PF00005 ABC transporter GII89_19345 PF02653 Branched-chain amino acid transport system / permease component GII89_19350 PF13407 Periplasmic binding protein domain GII89_19355 PF08239 Bacterial SH3 domain GII89_19360 PF13031 Protein of unknown function (DUF3892) GII89_19365 PF02525 Flavodoxin-like fold GII89_19370 PF03306 Alpha-acetolactate decarboxylase GII89_19375 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain GII89_19375 PF00205 Thiamine pyrophosphate enzyme, central domain GII89_19375 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain GII89_19380 PF03466 LysR substrate binding domain GII89_19380 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GII89_19385 PF02040 Arsenical pump membrane protein GII89_19400 PF08757 CotH kinase protein GII89_19410 PF01613 Flavin reductase like domain GII89_19415 PF13789 Domain of unknown function (DUF4181) GII89_19425 PF01037 Lrp/AsnC ligand binding domain GII89_19425 PF13404 AsnC-type helix-turn-helix domain GII89_19430 PF02417 Chromate transporter GII89_19435 PF02417 Chromate transporter GII89_19445 PF03358 NADPH-dependent FMN reductase GII89_19450 PF03466 LysR substrate binding domain GII89_19450 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GII89_19455 PF04493 Endonuclease V GII89_19460 PF07661 MORN repeat variant GII89_19465 PF14431 YwqJ-like deaminase GII89_19465 PF04740 LXG domain of WXG superfamily GII89_19465 PF14449 Pre-toxin TG GII89_19475 PF16888 Domain of unknown function (DUF5082) GII89_19485 PF09234 Domain of unknown function (DUF1963) GII89_19490 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain GII89_19490 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain GII89_19490 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain GII89_19500 PF13614 AAA domain GII89_19505 PF02706 Chain length determinant protein GII89_19505 PF13807 G-rich domain on putative tyrosine kinase GII89_19515 PF04434 SWIM zinc finger GII89_19520 PF12419 SNF2 Helicase protein GII89_19520 PF00271 Helicase conserved C-terminal domain GII89_19520 PF00176 SNF2 family N-terminal domain GII89_19530 PF00455 DeoR C terminal sensor domain GII89_19530 PF08220 DeoR-like helix-turn-helix domain GII89_19535 PF00436 Single-strand binding protein family GII89_19545 PF14183 YwpF-like protein GII89_19550 PF04203 Sortase domain GII89_19560 PF06580 Histidine kinase GII89_19560 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GII89_19565 PF01741 Large-conductance mechanosensitive channel, MscL GII89_19570 PF07977 FabA-like domain GII89_19575 PF18801 response regulator aspartate phosphatase H, N terminal GII89_19580 PF06429 Flagellar basal body rod FlgEFG protein C-terminal GII89_19580 PF00460 Flagella basal body rod protein GII89_19585 PF06429 Flagellar basal body rod FlgEFG protein C-terminal GII89_19585 PF00460 Flagella basal body rod protein GII89_19595 PF12116 Stage III sporulation protein D GII89_19605 PF01047 MarR family GII89_19610 PF07690 Major Facilitator Superfamily GII89_19615 PF13229 Right handed beta helix region GII89_19620 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin GII89_19625 PF07690 Major Facilitator Superfamily GII89_19630 PF00857 Isochorismatase family GII89_19640 PF00909 Ammonium Transporter Family GII89_19645 PF00543 Nitrogen regulatory protein P-II GII89_19650 PF01569 PAP2 superfamily GII89_19655 PF04892 VanZ like family GII89_19660 PF01551 Peptidase family M23 GII89_19665 PF00583 Acetyltransferase (GNAT) family GII89_19670 PF17319 Family of unknown function (DUF5362) GII89_19680 PF17370 Family of unknown function (DUF5392) GII89_19685 PF13091 PLD-like domain GII89_19685 PF13396 Phospholipase_D-nuclease N-terminal GII89_19690 PF07739 TipAS antibiotic-recognition domain GII89_19690 PF13411 MerR HTH family regulatory protein GII89_19695 PF17319 Family of unknown function (DUF5362) GII89_19700 PF13460 NAD(P)H-binding GII89_19705 PF02082 Transcriptional regulator GII89_19710 PF00449 Urease alpha-subunit, N-terminal domain GII89_19710 PF01979 Amidohydrolase family GII89_19715 PF00699 Urease beta subunit GII89_19720 PF00547 Urease, gamma subunit GII89_19735 PF05532 CsbD-like GII89_19745 PF18801 response regulator aspartate phosphatase H, N terminal GII89_19745 PF17874 MalT-like TPR region GII89_19750 PF06463 Molybdenum Cofactor Synthesis C GII89_19750 PF04055 Radical SAM superfamily GII89_19755 PF02634 FdhD/NarQ family GII89_19765 PF00092 von Willebrand factor type A domain GII89_19775 PF00092 von Willebrand factor type A domain GII89_19780 PF08486 Stage II sporulation protein GII89_19785 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) GII89_19790 PF08680 TATA-box binding GII89_19795 PF06612 Protein of unknown function (DUF1146) GII89_19805 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain GII89_19805 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain GII89_19810 PF02874 ATP synthase alpha/beta family, beta-barrel domain GII89_19810 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain GII89_19815 PF00231 ATP synthase GII89_19820 PF00306 ATP synthase alpha/beta chain, C terminal domain GII89_19820 PF02874 ATP synthase alpha/beta family, beta-barrel domain GII89_19820 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain GII89_19825 PF00213 ATP synthase delta (OSCP) subunit GII89_19830 PF00430 ATP synthase B/B' CF(0) GII89_19835 PF00137 ATP synthase subunit C GII89_19840 PF00119 ATP synthase A chain GII89_19845 PF03899 ATP synthase I chain GII89_19855 PF00464 Serine hydroxymethyltransferase GII89_19860 PF04260 Protein of unknown function (DUF436) GII89_19865 PF02502 Ribose/Galactose Isomerase GII89_19870 PF01451 Low molecular weight phosphotyrosine protein phosphatase GII89_19875 PF02659 Putative manganese efflux pump GII89_19880 PF01300 Telomere recombination GII89_19880 PF03481 Putative GTP-binding controlling metal-binding GII89_19890 PF09551 Stage II sporulation protein R (spore_II_R) GII89_19895 PF17094 Uncharacterised protein family (UPF0715) GII89_19900 PF17247 Family of unknown function (DUF5316) GII89_19905 PF17827 PrmC N-terminal domain GII89_19905 PF05175 Methyltransferase small domain GII89_19910 PF00472 RF-1 domain GII89_19910 PF03462 PCRF domain GII89_19915 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily GII89_19920 PF13411 MerR HTH family regulatory protein GII89_19925 PF03547 Membrane transport protein GII89_19930 PF00390 Malic enzyme, N-terminal domain GII89_19930 PF03949 Malic enzyme, NAD binding domain GII89_19935 PF00265 Thymidine kinase GII89_19940 PF01197 Ribosomal protein L31 GII89_19945 PF07497 Rho termination factor, RNA-binding domain GII89_19945 PF07498 Rho termination factor, N-terminal domain GII89_19945 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain GII89_19955 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded GII89_19960 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) GII89_19965 PF00923 Transaldolase/Fructose-6-phosphate aldolase GII89_19970 PF01116 Fructose-bisphosphate aldolase class-II GII89_19975 PF00072 Response regulator receiver domain GII89_19980 PF10740 Domain of unknown function (DUF2529) GII89_19985 PF00117 Glutamine amidotransferase class-I GII89_19985 PF06418 CTP synthase N-terminus GII89_19990 PF05066 HB1, ASXL, restriction endonuclease HTH domain GII89_19995 PF02770 Acyl-CoA dehydrogenase, middle domain GII89_19995 PF02771 Acyl-CoA dehydrogenase, N-terminal domain GII89_19995 PF00441 Acyl-CoA dehydrogenase, C-terminal domain GII89_20000 PF02754 Cysteine-rich domain GII89_20000 PF13183 4Fe-4S dicluster domain GII89_20005 PF13091 PLD-like domain GII89_20010 PF03851 UV-endonuclease UvdE GII89_20020 PF01872 RibD C-terminal domain GII89_20025 PF00664 ABC transporter transmembrane region GII89_20025 PF00005 ABC transporter GII89_20030 PF13091 PLD-like domain GII89_20030 PF13396 Phospholipase_D-nuclease N-terminal GII89_20040 PF02665 Nitrate reductase gamma subunit GII89_20045 PF02613 Nitrate reductase delta subunit GII89_20050 PF14711 Respiratory nitrate reductase beta C-terminal GII89_20050 PF13247 4Fe-4S dicluster domain GII89_20055 PF14710 Respiratory nitrate reductase alpha N-terminal GII89_20055 PF01568 Molydopterin dinucleotide binding domain GII89_20055 PF00384 Molybdopterin oxidoreductase GII89_20065 PF14256 YwiC-like protein GII89_20070 PF00325 Bacterial regulatory proteins, crp family GII89_20070 PF00027 Cyclic nucleotide-binding domain GII89_20075 PF07690 Major Facilitator Superfamily GII89_20080 PF00750 tRNA synthetases class I (R) GII89_20080 PF03485 Arginyl tRNA synthetase N terminal domain GII89_20080 PF05746 DALR anticodon binding domain GII89_20085 PF09148 Domain of unknown function (DUF1934) GII89_20090 PF11420 Bacteriocin subtilosin A GII89_20100 PF13186 Iron-sulfur cluster-binding domain GII89_20100 PF04055 Radical SAM superfamily GII89_20100 PF05402 Coenzyme PQQ synthesis protein D (PqqD) GII89_20110 PF00005 ABC transporter GII89_20120 PF05193 Peptidase M16 inactive domain GII89_20125 PF00675 Insulinase (Peptidase family M16) GII89_20150 PF18801 response regulator aspartate phosphatase H, N terminal GII89_20155 PF11131 Rap-phr extracellular signalling GII89_20160 PF04073 Aminoacyl-tRNA editing domain GII89_20165 PF00491 Arginase family GII89_20170 PF17284 Spermidine synthase tetramerisation domain GII89_20175 PF00912 Transglycosylase GII89_20175 PF00905 Penicillin binding protein transpeptidase domain GII89_20180 PF08741 YwhD family GII89_20185 PF02163 Peptidase family M50 GII89_20190 PF01361 Tautomerase enzyme GII89_20195 PF01047 MarR family GII89_20200 PF03129 Anticodon binding domain GII89_20200 PF02824 TGS domain GII89_20200 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) GII89_20200 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain GII89_20205 PF07690 Major Facilitator Superfamily GII89_20210 PF02082 Transcriptional regulator GII89_20220 PF01966 HD domain GII89_20225 PF07293 Protein of unknown function (DUF1450) GII89_20235 PF00892 EamA-like transporter family GII89_20240 PF03099 Biotin/lipoate A/B protein ligase family GII89_20245 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GII89_20245 PF03466 LysR substrate binding domain GII89_20250 PF01515 Phosphate acetyl/butaryl transferase GII89_20265 PF00155 Aminotransferase class I and II GII89_20270 PF07690 Major Facilitator Superfamily GII89_20285 PF07883 Cupin domain GII89_20295 PF07690 Major Facilitator Superfamily GII89_20300 PF00324 Amino acid permease GII89_20305 PF01546 Peptidase family M20/M25/M40 GII89_20310 PF00171 Aldehyde dehydrogenase family GII89_20315 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase GII89_20315 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain GII89_20320 PF17735 Biofilm surface layer A GII89_20325 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase GII89_20330 PF04321 RmlD substrate binding domain GII89_20335 PF16363 GDP-mannose 4,6 dehydratase GII89_20340 PF00483 Nucleotidyl transferase GII89_20345 PF04101 Glycosyltransferase family 28 C-terminal domain GII89_20350 PF02348 Cytidylyltransferase GII89_20355 PF08666 SAF domain GII89_20355 PF03102 NeuB family GII89_20360 PF00583 Acetyltransferase (GNAT) family GII89_20365 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family GII89_20370 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase GII89_20375 PF00535 Glycosyl transferase family 2 GII89_20380 PF09671 Spore coat protein (Spore_GerQ) GII89_20385 PF04241 Protein of unknown function (DUF423) GII89_20390 PF00860 Permease family GII89_20395 PF17261 Family of unknown function (DUF5327) GII89_20400 PF00171 Aldehyde dehydrogenase family GII89_20405 PF03167 Uracil DNA glycosylase superfamily GII89_20410 PF00535 Glycosyl transferase family 2 GII89_20425 PF03551 Transcriptional regulator PadR-like family GII89_20430 PF08543 Phosphomethylpyrimidine kinase GII89_20440 PF08244 Glycosyl hydrolases family 32 C terminal GII89_20440 PF00251 Glycosyl hydrolases family 32 N-terminal domain GII89_20445 PF02378 Phosphotransferase system, EIIC GII89_20445 PF00367 phosphotransferase system, EIIB GII89_20450 PF01226 Formate/nitrite transporter GII89_20455 PF03123 CAT RNA binding domain GII89_20455 PF00874 PRD domain GII89_20465 PF00082 Subtilase family GII89_20465 PF02225 PA domain GII89_20465 PF13860 FlgD Ig-like domain GII89_20465 PF05922 Peptidase inhibitor I9 GII89_20470 PF00296 Luciferase-like monooxygenase GII89_20475 PF00881 Nitroreductase family GII89_20480 PF01098 Cell cycle protein GII89_20485 PF17368 Spore morphogenesis and germination YwcE GII89_20490 PF03626 Prokaryotic Cytochrome C oxidase subunit IV GII89_20495 PF00510 Cytochrome c oxidase subunit III GII89_20500 PF00115 Cytochrome C and Quinol oxidase polypeptide I GII89_20505 PF02790 Cytochrome C oxidase subunit II, transmembrane domain GII89_20505 PF00116 Cytochrome C oxidase subunit II, periplasmic domain GII89_20510 PF04226 Transglycosylase associated protein GII89_20515 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain GII89_20515 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain GII89_20520 PF00288 GHMP kinases N terminal domain GII89_20520 PF10509 Galactokinase galactose-binding signature GII89_20520 PF08544 GHMP kinases C terminal GII89_20525 PF04138 GtrA-like protein GII89_20530 PF00440 Bacterial regulatory proteins, tetR family GII89_20535 PF08671 Anti-repressor SinI GII89_20540 PF04341 Protein of unknown function, DUF485 GII89_20545 PF00474 Sodium:solute symporter family GII89_20550 PF01323 DSBA-like thioredoxin domain GII89_20555 PF04261 Dyp-type peroxidase family GII89_20555 PF10518 TAT (twin-arginine translocation) pathway signal sequence GII89_20560 PF09375 Imelysin GII89_20565 PF03239 Iron permease FTR1 family GII89_20570 PF02581 Thiamine monophosphate synthase GII89_20575 PF02110 Hydroxyethylthiazole kinase family GII89_20580 PF03466 LysR substrate binding domain GII89_20580 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GII89_20585 PF03788 LrgA family GII89_20590 PF04172 LrgB-like family GII89_20595 PF12832 MFS_1 like family GII89_20600 PF09962 Uncharacterized conserved protein (DUF2196) GII89_20605 PF10672 S-adenosylmethionine-dependent methyltransferase GII89_20605 PF17785 PUA-like domain GII89_20610 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily GII89_20615 PF10924 Protein of unknown function (DUF2711) GII89_20620 PF02378 Phosphotransferase system, EIIC GII89_20625 PF00082 Subtilase family GII89_20630 PF02378 Phosphotransferase system, EIIC GII89_20630 PF00367 phosphotransferase system, EIIB GII89_20635 PF00874 PRD domain GII89_20635 PF03123 CAT RNA binding domain GII89_20640 PF01501 Glycosyl transferase family 8 GII89_20645 PF09529 Integral membrane protein (intg_mem_TP0381) GII89_20650 PF01047 MarR family GII89_20655 PF00579 tRNA synthetases class I (W and Y) GII89_20655 PF01479 S4 domain GII89_20660 PF02225 PA domain GII89_20660 PF04389 Peptidase family M28 GII89_20665 PF04607 Region found in RelA / SpoT proteins GII89_20670 PF01040 UbiA prenyltransferase family GII89_20680 PF12459 D-Ala-teichoic acid biosynthesis protein GII89_20685 PF13193 AMP-binding enzyme C-terminal domain GII89_20685 PF00501 AMP-binding enzyme GII89_20690 PF03062 MBOAT, membrane-bound O-acyltransferase family GII89_20695 PF00550 Phosphopantetheine attachment site GII89_20700 PF04914 DltD protein GII89_20705 PF00106 short chain dehydrogenase GII89_20710 PF01063 Amino-transferase class IV GII89_20715 PF02056 Family 4 glycosyl hydrolase GII89_20715 PF11975 Family 4 glycosyl hydrolase C-terminal domain GII89_20720 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit GII89_20725 PF02378 Phosphotransferase system, EIIC GII89_20730 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit GII89_20735 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 GII89_20735 PF08279 HTH domain GII89_20735 PF00874 PRD domain GII89_20735 PF05043 Mga helix-turn-helix domain GII89_20745 PF02245 Methylpurine-DNA glycosylase (MPG) GII89_20750 PF06628 Catalase-related immune-responsive GII89_20750 PF00199 Catalase GII89_20755 PF07690 Major Facilitator Superfamily GII89_20760 PF12679 ABC-2 family transporter protein GII89_20765 PF00005 ABC transporter GII89_20765 PF13732 Domain of unknown function (DUF4162) GII89_20770 PF13396 Phospholipase_D-nuclease N-terminal GII89_20780 PF17280 Family of unknown function (DUF5345) GII89_20785 PF04542 Sigma-70 region 2 GII89_20785 PF08281 Sigma-70, region 4 GII89_20790 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin GII89_20795 PF01256 Carbohydrate kinase GII89_20800 PF00005 ABC transporter GII89_20800 PF00664 ABC transporter transmembrane region GII89_20805 PF00664 ABC transporter transmembrane region GII89_20805 PF00005 ABC transporter GII89_20810 PF02322 Cytochrome bd terminal oxidase subunit II GII89_20815 PF01654 Cytochrome bd terminal oxidase subunit I GII89_20820 PF03390 2-hydroxycarboxylate transporter family GII89_20825 PF01435 Peptidase family M48 GII89_20835 PF01522 Polysaccharide deacetylase GII89_20840 PF00005 ABC transporter GII89_20840 PF17912 MalK OB fold domain GII89_20840 PF03459 TOBE domain GII89_20845 PF13556 PucR C-terminal helix-turn-helix domain GII89_20850 PF00171 Aldehyde dehydrogenase family GII89_20855 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) GII89_20855 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 GII89_20860 PF11611 Domain of unknown function (DUF4352) GII89_20865 PF16363 GDP-mannose 4,6 dehydratase GII89_20870 PF01161 Phosphatidylethanolamine-binding protein GII89_20875 PF03466 LysR substrate binding domain GII89_20875 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GII89_20885 PF07730 Histidine kinase GII89_20890 PF00196 Bacterial regulatory proteins, luxR family GII89_20890 PF00072 Response regulator receiver domain GII89_20895 PF01546 Peptidase family M20/M25/M40 GII89_20895 PF07687 Peptidase dimerisation domain GII89_20905 PF04525 LURP-one-related GII89_20910 PF01717 Cobalamin-independent synthase, Catalytic domain GII89_20915 PF01717 Cobalamin-independent synthase, Catalytic domain GII89_20925 PF01144 Coenzyme A transferase GII89_20930 PF01144 Coenzyme A transferase GII89_20940 PF08241 Methyltransferase domain GII89_20945 PF01773 Na+ dependent nucleoside transporter N-terminus GII89_20945 PF07662 Na+ dependent nucleoside transporter C-terminus GII89_20960 PF06628 Catalase-related immune-responsive GII89_20960 PF00199 Catalase GII89_20960 PF18011 C-terminal domain found in long catalases GII89_20965 PF03600 Citrate transporter GII89_20970 PF00722 Glycosyl hydrolases family 16 GII89_20975 PF03123 CAT RNA binding domain GII89_20975 PF00874 PRD domain GII89_20985 PF11700 Vacuole effluxer Atg22 like GII89_20990 PF00270 DEAD/DEAH box helicase GII89_20990 PF00271 Helicase conserved C-terminal domain GII89_20990 PF03880 DbpA RNA binding domain GII89_20995 PF13472 GDSL-like Lipase/Acylhydrolase family GII89_21010 PF14176 YxiJ-like protein GII89_21015 PF10898 Protein of unknown function (DUF2716) GII89_21050 PF05593 RHS Repeat GII89_21055 PF00892 EamA-like transporter family GII89_21060 PF00582 Universal stress protein family GII89_21065 PF00232 Glycosyl hydrolase family 1 GII89_21070 PF02378 Phosphotransferase system, EIIC GII89_21070 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 GII89_21070 PF00367 phosphotransferase system, EIIB GII89_21075 PF18593 CdiI immunity protein GII89_21085 PF14449 Pre-toxin TG GII89_21085 PF04740 LXG domain of WXG superfamily GII89_21095 PF16888 Domain of unknown function (DUF5082) GII89_21100 PF16369 C-terminal lipocalin-like domain GII89_21100 PF04616 Glycosyl hydrolases family 43 GII89_21110 PF09021 HutP GII89_21115 PF00221 Aromatic amino acid lyase GII89_21120 PF17391 Urocanase N-terminal domain GII89_21120 PF17392 Urocanase C-terminal domain GII89_21120 PF01175 Urocanase Rossmann-like domain GII89_21125 PF01979 Amidohydrolase family GII89_21130 PF00491 Arginase family GII89_21135 PF00324 Amino acid permease GII89_21140 PF02885 Glycosyl transferase family, helical bundle domain GII89_21140 PF00591 Glycosyl transferase family, a/b domain GII89_21140 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain GII89_21145 PF07662 Na+ dependent nucleoside transporter C-terminus GII89_21145 PF01773 Na+ dependent nucleoside transporter N-terminus GII89_21150 PF01791 DeoC/LacD family aldolase GII89_21155 PF04198 Putative sugar-binding domain GII89_21160 PF06724 Domain of Unknown Function (DUF1206) GII89_21165 PF04346 Ethanolamine utilisation protein, EutH GII89_21170 PF03972 MmgE/PrpD family GII89_21180 PF00005 ABC transporter GII89_21185 PF00528 Binding-protein-dependent transport system inner membrane component GII89_21190 PF00497 Bacterial extracellular solute-binding proteins, family 3 GII89_21210 PF02275 Linear amide C-N hydrolases, choloylglycine hydrolase family GII89_21225 PF11631 Protein of unknown function (DUF3255) GII89_21245 PF01497 Periplasmic binding protein GII89_21250 PF06486 Protein of unknown function (DUF1093) GII89_21255 PF02687 FtsX-like permease family GII89_21260 PF00005 ABC transporter GII89_21265 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GII89_21270 PF00486 Transcriptional regulatory protein, C terminal GII89_21270 PF00072 Response regulator receiver domain GII89_21275 PF01116 Fructose-bisphosphate aldolase class-II GII89_21280 PF01261 Xylose isomerase-like TIM barrel GII89_21285 PF01261 Xylose isomerase-like TIM barrel GII89_21290 PF01408 Oxidoreductase family, NAD-binding Rossmann fold GII89_21290 PF02894 Oxidoreductase family, C-terminal alpha/beta domain GII89_21295 PF07690 Major Facilitator Superfamily GII89_21300 PF01261 Xylose isomerase-like TIM barrel GII89_21305 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain GII89_21305 PF00205 Thiamine pyrophosphate enzyme, central domain GII89_21305 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain GII89_21310 PF00294 pfkB family carbohydrate kinase GII89_21315 PF04962 KduI/IolB family GII89_21320 PF00171 Aldehyde dehydrogenase family GII89_21325 PF00455 DeoR C terminal sensor domain GII89_21325 PF08220 DeoR-like helix-turn-helix domain GII89_21330 PF00248 Aldo/keto reductase family GII89_21340 PF10850 Protein of unknown function (DUF2653) GII89_21345 PF00083 Sugar (and other) transporter GII89_21350 PF00183 Hsp90 protein GII89_21365 PF00440 Bacterial regulatory proteins, tetR family GII89_21370 PF00171 Aldehyde dehydrogenase family GII89_21375 PF00583 Acetyltransferase (GNAT) family GII89_21380 PF08007 Cupin superfamily protein GII89_21385 PF08241 Methyltransferase domain GII89_21390 PF05402 Coenzyme PQQ synthesis protein D (PqqD) GII89_21400 PF13537 Glutamine amidotransferase domain GII89_21400 PF00733 Asparagine synthase GII89_21405 PF07690 Major Facilitator Superfamily GII89_21410 PF01011 PQQ enzyme repeat GII89_21410 PF13360 PQQ-like domain GII89_21410 PF13570 PQQ-like domain GII89_21415 PF17369 Family of unknown function (DUF5391) GII89_21420 PF06271 RDD family GII89_21425 PF04235 Protein of unknown function (DUF418) GII89_21430 PF07883 Cupin domain GII89_21435 PF00440 Bacterial regulatory proteins, tetR family GII89_21440 PF00106 short chain dehydrogenase GII89_21445 PF01047 MarR family GII89_21450 PF03788 LrgA family GII89_21455 PF04172 LrgB-like family GII89_21460 PF04230 Polysaccharide pyruvyl transferase GII89_21465 PF02595 Glycerate kinase family GII89_21470 PF07729 FCD domain GII89_21470 PF00392 Bacterial regulatory proteins, gntR family GII89_21475 PF02782 FGGY family of carbohydrate kinases, C-terminal domain GII89_21475 PF00370 FGGY family of carbohydrate kinases, N-terminal domain GII89_21480 PF02447 GntP family permease GII89_21485 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain GII89_21485 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase GII89_21490 PF00578 AhpC/TSA family GII89_21495 PF13192 Thioredoxin domain GII89_21495 PF07992 Pyridine nucleotide-disulphide oxidoreductase GII89_21500 PF00232 Glycosyl hydrolase family 1 GII89_21505 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 GII89_21510 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 GII89_21510 PF00367 phosphotransferase system, EIIB GII89_21510 PF02378 Phosphotransferase system, EIIC GII89_21515 PF00392 Bacterial regulatory proteins, gntR family GII89_21515 PF07702 UTRA domain GII89_21530 PF00005 ABC transporter GII89_21540 PF04055 Radical SAM superfamily GII89_21550 PF06874 Firmicute fructose-1,6-bisphosphatase GII89_21555 PF10088 Uncharacterised protein conserved in bacteria (DUF2326) GII89_21555 PF13476 AAA domain GII89_21565 PF00149 Calcineurin-like phosphoesterase GII89_21570 PF02590 Predicted SPOUT methyltransferase GII89_21575 PF14116 YyzF-like protein GII89_21585 PF00107 Zinc-binding dehydrogenase GII89_21585 PF08240 Alcohol dehydrogenase GroES-like domain GII89_21595 PF10852 Protein of unknown function (DUF2651) GII89_21610 PF00583 Acetyltransferase (GNAT) family GII89_21615 PF18801 response regulator aspartate phosphatase H, N terminal GII89_21625 PF00491 Arginase family GII89_21630 PF00324 Amino acid permease GII89_21635 PF00202 Aminotransferase class-III GII89_21640 PF00158 Sigma-54 interaction domain GII89_21640 PF13426 PAS domain GII89_21640 PF02954 Bacterial regulatory protein, Fis family GII89_21655 PF13180 PDZ domain GII89_21660 PF00753 Metallo-beta-lactamase superfamily GII89_21665 PF09648 YycH protein GII89_21670 PF07435 YycH protein GII89_21675 PF00672 HAMP domain GII89_21675 PF13426 PAS domain GII89_21675 PF00512 His Kinase A (phospho-acceptor) domain GII89_21675 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GII89_21680 PF00486 Transcriptional regulatory protein, C terminal GII89_21680 PF00072 Response regulator receiver domain GII89_21705 PF00709 Adenylosuccinate synthetase GII89_21710 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily GII89_21715 PF03796 DnaB-like helicase C terminal domain GII89_21715 PF00772 DnaB-like helicase N terminal domain GII89_21720 PF09954 Uncharacterized protein conserved in bacteria (DUF2188) GII89_21730 PF14174 YycC-like protein GII89_21735 PF07690 Major Facilitator Superfamily GII89_21740 PF13231 Dolichyl-phosphate-mannose-protein mannosyltransferase GII89_21745 PF03948 Ribosomal protein L9, C-terminal domain GII89_21745 PF01281 Ribosomal protein L9, N-terminal domain GII89_21750 PF01368 DHH family GII89_21750 PF02272 DHHA1 domain GII89_21755 PF09991 Predicted membrane protein (DUF2232) GII89_21765 PF07875 Coat F domain GII89_21770 PF01638 HxlR-like helix-turn-helix GII89_21775 PF01368 DHH family GII89_21775 PF02833 DHHA2 domain GII89_21790 PF07690 Major Facilitator Superfamily GII89_21805 PF10916 Protein of unknown function (DUF2712) GII89_21810 PF10920 Protein of unknown function (DUF2705) GII89_21820 PF10920 Protein of unknown function (DUF2705) GII89_21825 PF00005 ABC transporter GII89_21840 PF13474 SnoaL-like domain GII89_21845 PF00805 Pentapeptide repeats (8 copies) GII89_21850 PF07690 Major Facilitator Superfamily GII89_21855 PF03466 LysR substrate binding domain GII89_21855 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GII89_21860 PF13673 Acetyltransferase (GNAT) domain GII89_21870 PF00753 Metallo-beta-lactamase superfamily GII89_21875 PF01047 MarR family GII89_21880 PF13673 Acetyltransferase (GNAT) domain GII89_21890 PF00583 Acetyltransferase (GNAT) family GII89_21895 PF04237 YjbR GII89_21900 PF01872 RibD C-terminal domain GII89_21910 PF07690 Major Facilitator Superfamily GII89_21915 PF08050 Tetracycline resistance leader peptide GII89_21920 PF03190 Protein of unknown function, DUF255 GII89_21925 PF13411 MerR HTH family regulatory protein GII89_21930 PF00892 EamA-like transporter family GII89_21935 PF03190 Protein of unknown function, DUF255 GII89_21940 PF02517 CPBP intramembrane metalloprotease GII89_21945 PF00083 Sugar (and other) transporter GII89_21950 PF12464 Maltose acetyltransferase GII89_21950 PF14602 Hexapeptide repeat of succinyl-transferase GII89_21955 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily GII89_21960 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family GII89_21960 PF00356 Bacterial regulatory proteins, lacI family GII89_21965 PF03372 Endonuclease/Exonuclease/phosphatase family GII89_21970 PF01084 Ribosomal protein S18 GII89_21975 PF00436 Single-strand binding protein family GII89_21980 PF01250 Ribosomal protein S6 GII89_21985 PF06071 Protein of unknown function (DUF933) GII89_21985 PF01926 50S ribosome-binding GTPase GII89_21990 PF04879 Molybdopterin oxidoreductase Fe4S4 domain GII89_21990 PF01568 Molydopterin dinucleotide binding domain GII89_21990 PF00384 Molybdopterin oxidoreductase GII89_21995 PF06107 Bacterial protein of unknown function (DUF951) GII89_22005 PF06866 Protein of unknown function (DUF1256) GII89_22010 PF17762 HTH domain found in ParB protein GII89_22010 PF02195 ParB-like nuclease domain GII89_22015 PF13614 AAA domain GII89_22020 PF06713 Bacterial PH domain GII89_22025 PF02195 ParB-like nuclease domain GII89_22025 PF17762 HTH domain found in ParB protein GII89_22030 PF02527 rRNA small subunit methyltransferase G GII89_22035 PF01134 Glucose inhibited division protein A GII89_22035 PF13932 GidA associated domain GII89_22040 PF12631 MnmE helical domain GII89_22040 PF01926 50S ribosome-binding GTPase GII89_22040 PF10396 GTP-binding protein TrmE N-terminus GII89_22045 PF01424 R3H domain GII89_22045 PF14804 Jag N-terminus GII89_22050 PF02096 60Kd inner membrane protein GII89_22055 PF00825 Ribonuclease P GII89_22060 PF00468 Ribosomal protein L34 GII89_22120 PF04740 LXG domain of WXG superfamily GII89_22120 PF14410 HNH/ENDO VII superfamily nuclease with conserved GHE residues GII89_22120 PF14449 Pre-toxin TG GII89_22175 PF01464 Transglycosylase SLT domain GII89_22265 PF18801 response regulator aspartate phosphatase H, N terminal GII89_22285 PF01476 LysM domain GII89_22285 PF06725 3D domain GII89_22295 PF00589 Phage integrase family GII89_22330 PF10850 Protein of unknown function (DUF2653) GII89_22370 PF00317 Ribonucleotide reductase, all-alpha domain GII89_22370 PF02867 Ribonucleotide reductase, barrel domain GII89_22370 PF03477 ATP cone domain GII89_22375 PF00268 Ribonucleotide reductase, small chain GII89_22380 PF00258 Flavodoxin GII89_22420 PF17768 RecJ OB domain GII89_22420 PF01368 DHH family GII89_22455 PF00075 RNase H GII89_22475 PF17657 Bacterial DNA polymerase III alpha subunit finger domain GII89_22475 PF02811 PHP domain GII89_22475 PF07733 Bacterial DNA polymerase III alpha NTPase domain GII89_22475 PF14579 Helix-hairpin-helix motif GII89_22495 PF00625 Guanylate kinase GII89_22530 PF00265 Thymidine kinase GII89_22540 PF06970 Replication initiator protein A (RepA) N-terminus GII89_22540 PF18008 Replication initiator protein A C-terminal domain GII89_22545 PF00204 DNA gyrase B GII89_22545 PF00986 DNA gyrase B subunit, carboxyl terminus GII89_22545 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GII89_22545 PF01751 Toprim domain