DJ572_00030 SM00382 ATPases associated with a variety of cellular activities DJ572_00030 SM01086 C-terminal, D2-small domain, of ClpB protein DJ572_00035 SM00382 ATPases associated with a variety of cellular activities DJ572_00045 SM00670 Large family of predicted nucleotide-binding domains DJ572_00075 SM00840 DJ572_00075 DJ572_00080 SM00535 Ribonuclease III family DJ572_00085 SM00967 RNA 2'-O ribose methyltransferase substrate binding DJ572_00110 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. DJ572_00110 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. DJ572_00115 SM00649 Ribosomal protein L11/L12 DJ572_00145 SM00663 RNA polymerase I subunit A N-terminus DJ572_00165 SM00838 Elongation factor G C-terminus DJ572_00165 SM00889 Elongation factor G, domain IV DJ572_00180 SM01403 DJ572_00180 DJ572_00200 SM01382 DJ572_00200 DJ572_00200 SM01383 DJ572_00200 DJ572_00215 SM00322 K homology RNA-binding domain DJ572_00235 SM01374 DJ572_00235 DJ572_00240 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. DJ572_00305 SM00316 Ribosomal protein S1-like RNA-binding domain DJ572_00325 SM00662 RNA polymerases D DJ572_00335 SM00382 ATPases associated with a variety of cellular activities DJ572_00340 SM00382 ATPases associated with a variety of cellular activities DJ572_00375 SM00646 DJ572_00375 DJ572_00390 SM01251 DJ572_00390 DJ572_00450 SM00470 ParB-like nuclease domain DJ572_00590 SM00342 helix_turn_helix, arabinose operon control protein DJ572_00695 SM00478 endonuclease III DJ572_00700 SM00342 helix_turn_helix, arabinose operon control protein DJ572_00735 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor DJ572_00765 SM01260 DJ572_00765 DJ572_00780 SM00382 ATPases associated with a variety of cellular activities DJ572_00790 SM00448 cheY-homologous receiver domain DJ572_00790 SM00862 Transcriptional regulatory protein, C terminal DJ572_00795 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain DJ572_00795 SM00388 His Kinase A (phosphoacceptor) domain DJ572_00875 SM00347 helix_turn_helix multiple antibiotic resistance protein DJ572_00900 SM00342 helix_turn_helix, arabinose operon control protein DJ572_00945 SM00450 Rhodanese Homology Domain DJ572_00965 SM00345 helix_turn_helix gluconate operon transcriptional repressor DJ572_00965 SM00866 DJ572_00965 DJ572_01005 SM00387 Histidine kinase-like ATPases DJ572_01010 SM00448 cheY-homologous receiver domain DJ572_01020 SM01130 DJ572_01020 DJ572_01035 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain DJ572_01040 SM00345 helix_turn_helix gluconate operon transcriptional repressor DJ572_01040 SM00895 DJ572_01040 DJ572_01045 SM00858 DJ572_01045 DJ572_01065 SM00448 cheY-homologous receiver domain DJ572_01065 SM00862 Transcriptional regulatory protein, C terminal DJ572_01070 SM00387 Histidine kinase-like ATPases DJ572_01070 SM00388 His Kinase A (phosphoacceptor) domain DJ572_01075 SM00382 ATPases associated with a variety of cellular activities DJ572_01095 SM00327 von Willebrand factor (vWF) type A domain DJ572_01140 SM00870 DJ572_01140 DJ572_01160 SM00387 Histidine kinase-like ATPases DJ572_01165 SM00448 cheY-homologous receiver domain DJ572_01165 SM00850 LytTr DNA-binding domain DJ572_01170 SM00382 ATPases associated with a variety of cellular activities DJ572_01205 SM00028 Tetratricopeptide repeats DJ572_01215 SM00642 Alpha-amylase domain DJ572_01225 SM00382 ATPases associated with a variety of cellular activities DJ572_01285 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor DJ572_01290 SM00116 Domain in cystathionine beta-synthase and other proteins. DJ572_01290 SM00382 ATPases associated with a variety of cellular activities DJ572_01320 SM00632 DJ572_01320 DJ572_01320 SM00642 Alpha-amylase domain DJ572_01340 SM00347 helix_turn_helix multiple antibiotic resistance protein DJ572_01455 SM00926 Molybdopterin oxidoreductase Fe4S4 domain DJ572_01485 SM00833 Cobalamin synthesis protein cobW C-terminal domain DJ572_01495 SM00062 Bacterial periplasmic substrate-binding proteins DJ572_01525 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). DJ572_01525 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain DJ572_01535 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family DJ572_01545 SM00823 Phosphopantetheine attachment site DJ572_01545 SM01294 DJ572_01545 DJ572_01550 SM00823 Phosphopantetheine attachment site DJ572_01555 SM00823 Phosphopantetheine attachment site DJ572_01580 SM00345 helix_turn_helix gluconate operon transcriptional repressor DJ572_01595 SM00382 ATPases associated with a variety of cellular activities DJ572_01605 SM00062 Bacterial periplasmic substrate-binding proteins DJ572_01645 SM00710 Parallel beta-helix repeats DJ572_01645 SM00722 Domain present in carbohydrate binding proteins and sugar hydrolses DJ572_01670 SM00382 ATPases associated with a variety of cellular activities DJ572_01680 SM00448 cheY-homologous receiver domain DJ572_01680 SM00862 Transcriptional regulatory protein, C terminal DJ572_01685 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain DJ572_01685 SM00387 Histidine kinase-like ATPases DJ572_01685 SM00388 His Kinase A (phosphoacceptor) domain DJ572_01690 SM00028 Tetratricopeptide repeats DJ572_01725 SM00382 ATPases associated with a variety of cellular activities DJ572_01755 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor DJ572_01760 SM00345 helix_turn_helix gluconate operon transcriptional repressor DJ572_01795 SM00420 helix_turn_helix, Deoxyribose operon repressor DJ572_01820 SM01329 DJ572_01820 DJ572_01865 SM00796 Allophanate hydrolase subunit 1 DJ572_01870 SM00797 Allophanate hydrolase subunit 2 DJ572_01875 SM00346 helix_turn_helix isocitrate lyase regulation DJ572_01950 SM00344 helix_turn_helix ASNC type DJ572_01955 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain DJ572_01955 SM00437 Bacterial DNA topoisomerase I DNA-binding domain DJ572_01955 SM00493 DJ572_01955 DJ572_01965 SM00267 diguanylate cyclase DJ572_02055 SM00091 PAS domain DJ572_02055 SM00387 Histidine kinase-like ATPases DJ572_02060 SM00448 cheY-homologous receiver domain DJ572_02075 SM00382 ATPases associated with a variety of cellular activities DJ572_02130 SM00487 DEAD-like helicases superfamily DJ572_02130 SM00490 helicase superfamily c-terminal domain DJ572_02160 SM01005 Alanine racemase, C-terminal domain DJ572_02185 SM00387 Histidine kinase-like ATPases DJ572_02190 SM00331 Sigma factor PP2C-like phosphatases DJ572_02210 SM00331 Sigma factor PP2C-like phosphatases DJ572_02210 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain DJ572_02215 SM00316 Ribosomal protein S1-like RNA-binding domain DJ572_02215 SM00732 Likely ribonuclease with RNase H fold. DJ572_02225 SM00731 SprT homologues. DJ572_02315 SM00530 Helix-turn-helix XRE-family like proteins DJ572_02345 SM00357 Cold shock protein domain DJ572_02350 SM01058 CarD-like/TRCF domain DJ572_02365 SM00342 helix_turn_helix, arabinose operon control protein DJ572_02375 SM00342 helix_turn_helix, arabinose operon control protein DJ572_02375 SM00871 Bacterial transcription activator, effector binding domain DJ572_02380 SM00345 helix_turn_helix gluconate operon transcriptional repressor DJ572_02410 SM00448 cheY-homologous receiver domain DJ572_02410 SM00862 Transcriptional regulatory protein, C terminal DJ572_02415 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain DJ572_02415 SM00387 Histidine kinase-like ATPases DJ572_02415 SM00388 His Kinase A (phosphoacceptor) domain DJ572_02440 SM00345 helix_turn_helix gluconate operon transcriptional repressor DJ572_02480 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor DJ572_02505 SM00345 helix_turn_helix gluconate operon transcriptional repressor DJ572_02515 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor DJ572_02535 SM00387 Histidine kinase-like ATPases DJ572_02540 SM00421 helix_turn_helix, Lux Regulon DJ572_02540 SM00448 cheY-homologous receiver domain DJ572_02560 SM00422 helix_turn_helix, mercury resistance DJ572_02560 SM00871 Bacterial transcription activator, effector binding domain DJ572_02650 SM00354 helix_turn _helix lactose operon repressor DJ572_02665 SM00382 ATPases associated with a variety of cellular activities DJ572_02680 SM00347 helix_turn_helix multiple antibiotic resistance protein DJ572_02695 SM00347 helix_turn_helix multiple antibiotic resistance protein DJ572_02695 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor DJ572_02710 SM00345 helix_turn_helix gluconate operon transcriptional repressor DJ572_02710 SM00895 DJ572_02710 DJ572_02715 SM00257 Lysin motif DJ572_02715 SM00636 DJ572_02715 DJ572_02730 SM00098 Alkaline phosphatase homologues DJ572_02750 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. DJ572_02785 SM00345 helix_turn_helix gluconate operon transcriptional repressor DJ572_02785 SM00866 DJ572_02785 DJ572_02870 SM00382 ATPases associated with a variety of cellular activities DJ572_02880 SM00881 CoA binding domain DJ572_02910 SM00883 Chaperonin 10 Kd subunit DJ572_02930 SM00028 Tetratricopeptide repeats DJ572_02930 SM00382 ATPases associated with a variety of cellular activities DJ572_02935 SM00829 Enoylreductase DJ572_02980 SM00829 Enoylreductase DJ572_03045 SM00460 Transglutaminase/protease-like homologues DJ572_03080 SM01001 AIR carboxylase DJ572_03090 SM00998 Adenylosuccinate lyase C-terminus DJ572_03105 SM01211 DJ572_03105 DJ572_03130 SM00798 AICARFT/IMPCHase bienzyme DJ572_03130 SM00851 MGS-like domain DJ572_03135 SM01209 DJ572_03135 DJ572_03135 SM01210 DJ572_03135 DJ572_03140 SM00344 helix_turn_helix ASNC type DJ572_03185 SM00278 Helix-hairpin-helix DNA-binding motif class 1 DJ572_03185 SM00292 breast cancer carboxy-terminal domain DJ572_03185 SM00532 Ligase N family DJ572_03220 SM00845 GatB domain DJ572_03235 SM00046 Diacylglycerol kinase catalytic domain (presumed) DJ572_03305 SM00028 Tetratricopeptide repeats DJ572_03370 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain DJ572_03370 SM00387 Histidine kinase-like ATPases DJ572_03375 SM00342 helix_turn_helix, arabinose operon control protein DJ572_03375 SM00448 cheY-homologous receiver domain DJ572_03400 SM00342 helix_turn_helix, arabinose operon control protein DJ572_03505 SM00347 helix_turn_helix multiple antibiotic resistance protein DJ572_03515 SM00894 Excalibur calcium-binding domain DJ572_03590 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). DJ572_03595 SM00382 ATPases associated with a variety of cellular activities DJ572_03605 SM00422 helix_turn_helix, mercury resistance DJ572_03625 SM00382 ATPases associated with a variety of cellular activities DJ572_03630 SM00487 DEAD-like helicases superfamily DJ572_03630 SM00490 helicase superfamily c-terminal domain DJ572_03640 SM00829 Enoylreductase DJ572_03660 SM00382 ATPases associated with a variety of cellular activities DJ572_03695 SM00656 DJ572_03695 DJ572_03705 SM00387 Histidine kinase-like ATPases DJ572_03710 SM00448 cheY-homologous receiver domain DJ572_03725 SM00849 Metallo-beta-lactamase superfamily DJ572_03815 SM00642 Alpha-amylase domain DJ572_03820 SM00345 helix_turn_helix gluconate operon transcriptional repressor DJ572_03820 SM00866 DJ572_03820 DJ572_03850 SM00226 Low molecular weight phosphatase family DJ572_03910 SM00478 endonuclease III DJ572_03945 SM00861 Transketolase, pyrimidine binding domain DJ572_03960 SM00382 ATPases associated with a variety of cellular activities DJ572_04015 SM00382 ATPases associated with a variety of cellular activities DJ572_04020 SM00382 ATPases associated with a variety of cellular activities DJ572_04035 SM00387 Histidine kinase-like ATPases DJ572_04040 SM00421 helix_turn_helix, Lux Regulon DJ572_04040 SM00448 cheY-homologous receiver domain DJ572_04050 SM00382 ATPases associated with a variety of cellular activities DJ572_04090 SM00347 helix_turn_helix multiple antibiotic resistance protein DJ572_04165 SM00287 Bacterial SH3 domain homologues DJ572_04195 SM00478 endonuclease III DJ572_04195 SM00525 DJ572_04195 DJ572_04225 SM00382 ATPases associated with a variety of cellular activities DJ572_04390 SM01060 DJ572_04390 DJ572_04395 SM00382 ATPases associated with a variety of cellular activities DJ572_04400 SM00062 Bacterial periplasmic substrate-binding proteins DJ572_04430 SM00530 Helix-turn-helix XRE-family like proteins DJ572_04445 SM00567 E-Z type HEAT repeats DJ572_04475 SM00763 PrkA AAA domain DJ572_04485 SM00347 helix_turn_helix multiple antibiotic resistance protein DJ572_04520 SM00345 helix_turn_helix gluconate operon transcriptional repressor DJ572_04525 SM00382 ATPases associated with a variety of cellular activities DJ572_04530 SM00382 ATPases associated with a variety of cellular activities DJ572_04540 SM00357 Cold shock protein domain DJ572_04555 SM00267 diguanylate cyclase DJ572_04585 SM00318 Staphylococcal nuclease homologues DJ572_04595 SM00363 S4 RNA-binding domain DJ572_04605 SM00116 Domain in cystathionine beta-synthase and other proteins. DJ572_04655 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. DJ572_04655 SM00387 Histidine kinase-like ATPases DJ572_04660 SM00421 helix_turn_helix, Lux Regulon DJ572_04660 SM00448 cheY-homologous receiver domain DJ572_04680 SM00257 Lysin motif DJ572_04700 SM00098 Alkaline phosphatase homologues DJ572_04705 SM00257 Lysin motif DJ572_04735 SM00345 helix_turn_helix gluconate operon transcriptional repressor DJ572_04765 SM00563 Phosphate acyltransferases DJ572_04770 SM01091 Transporter associated domain DJ572_04775 SM00422 helix_turn_helix, mercury resistance DJ572_04785 SM01091 Transporter associated domain DJ572_04845 SM00382 ATPases associated with a variety of cellular activities DJ572_04850 SM00382 ATPases associated with a variety of cellular activities DJ572_04905 SM00729 Elongator protein 3, MiaB family, Radical SAM DJ572_04935 SM00382 ATPases associated with a variety of cellular activities DJ572_04955 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. DJ572_04995 SM00347 helix_turn_helix multiple antibiotic resistance protein DJ572_05025 SM00382 ATPases associated with a variety of cellular activities DJ572_05110 SM01022 DJ572_05110 DJ572_05125 SM00849 Metallo-beta-lactamase superfamily DJ572_05165 SM00829 Enoylreductase DJ572_05175 SM00855 Phosphoglycerate mutase family DJ572_05195 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). DJ572_05210 SM00914 DJ572_05210 DJ572_05225 SM00894 Excalibur calcium-binding domain DJ572_05260 SM00347 helix_turn_helix multiple antibiotic resistance protein DJ572_05285 SM00354 helix_turn _helix lactose operon repressor DJ572_05420 SM00342 helix_turn_helix, arabinose operon control protein DJ572_05425 SM00354 helix_turn _helix lactose operon repressor DJ572_05445 SM00345 helix_turn_helix gluconate operon transcriptional repressor DJ572_05490 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain DJ572_05520 SM00316 Ribosomal protein S1-like RNA-binding domain DJ572_05530 SM00752 Horizontally Transferred TransMembrane Domain DJ572_05610 SM00859 Semialdehyde dehydrogenase, NAD binding domain DJ572_05630 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain DJ572_05635 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain DJ572_05685 SM00825 Beta-ketoacyl synthase DJ572_05695 SM00382 ATPases associated with a variety of cellular activities DJ572_05700 SM00382 ATPases associated with a variety of cellular activities DJ572_05745 SM00382 ATPases associated with a variety of cellular activities DJ572_05750 SM00382 ATPases associated with a variety of cellular activities DJ572_05815 SM01118 DJ572_05815 DJ572_05825 SM00954 Region found in RelA / SpoT proteins DJ572_06060 SM00635 Bacterial Ig-like domain 2 DJ572_06155 SM00926 Molybdopterin oxidoreductase Fe4S4 domain DJ572_06155 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region DJ572_06205 SM00382 ATPases associated with a variety of cellular activities DJ572_06215 SM00835 Cupin DJ572_06245 SM00829 Enoylreductase DJ572_06265 SM00354 helix_turn _helix lactose operon repressor DJ572_06275 SM00858 DJ572_06275 DJ572_06290 SM00382 ATPases associated with a variety of cellular activities DJ572_06295 SM00028 Tetratricopeptide repeats DJ572_06310 SM00257 Lysin motif DJ572_06310 SM00644 DJ572_06310 DJ572_06335 SM00530 Helix-turn-helix XRE-family like proteins DJ572_06350 SM00382 ATPases associated with a variety of cellular activities DJ572_06450 SM00257 Lysin motif DJ572_06515 SM00257 Lysin motif DJ572_06515 SM00644 DJ572_06515 DJ572_06560 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. DJ572_06585 SM00382 ATPases associated with a variety of cellular activities DJ572_06600 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain DJ572_06610 SM00382 ATPases associated with a variety of cellular activities DJ572_06670 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase DJ572_06685 SM00347 helix_turn_helix multiple antibiotic resistance protein DJ572_06725 SM00382 ATPases associated with a variety of cellular activities DJ572_06740 SM00448 cheY-homologous receiver domain DJ572_06740 SM00862 Transcriptional regulatory protein, C terminal DJ572_06745 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain DJ572_06745 SM00387 Histidine kinase-like ATPases DJ572_06745 SM00388 His Kinase A (phosphoacceptor) domain DJ572_06770 SM00116 Domain in cystathionine beta-synthase and other proteins. DJ572_06770 SM00924 MgtE intracellular N domain DJ572_06775 SM00422 helix_turn_helix, mercury resistance DJ572_06790 SM00347 helix_turn_helix multiple antibiotic resistance protein DJ572_06825 SM00559 Ku70 and Ku80 are 70kDa and 80kDa subunits of the Lupus Ku autoantigen DJ572_06830 SM00052 Putative diguanylate phosphodiesterase DJ572_06830 SM00267 diguanylate cyclase DJ572_06890 SM00091 PAS domain DJ572_06890 SM00387 Histidine kinase-like ATPases DJ572_06890 SM00388 His Kinase A (phosphoacceptor) domain DJ572_06930 SM01007 Class II Aldolase and Adducin N-terminal domain DJ572_06955 SM00387 Histidine kinase-like ATPases DJ572_06955 SM00388 His Kinase A (phosphoacceptor) domain DJ572_06960 SM00347 helix_turn_helix multiple antibiotic resistance protein DJ572_06980 SM00382 ATPases associated with a variety of cellular activities DJ572_06980 SM01086 C-terminal, D2-small domain, of ClpB protein DJ572_07015 SM00822 DJ572_07015 DJ572_07020 SM00257 Lysin motif DJ572_07025 SM00257 Lysin motif DJ572_07030 SM00636 DJ572_07030 DJ572_07080 SM00354 helix_turn _helix lactose operon repressor DJ572_07085 SM01061 CAT RNA binding domain DJ572_07120 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). DJ572_07120 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain DJ572_07140 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) DJ572_07140 SM00091 PAS domain DJ572_07140 SM00387 Histidine kinase-like ATPases DJ572_07140 SM00388 His Kinase A (phosphoacceptor) domain DJ572_07155 SM00260 Two component signalling adaptor domain DJ572_07155 SM00448 cheY-homologous receiver domain DJ572_07170 SM00257 Lysin motif DJ572_07185 SM00052 Putative diguanylate phosphodiesterase DJ572_07280 SM00852 Probable molybdopterin binding domain DJ572_07300 SM00382 ATPases associated with a variety of cellular activities DJ572_07305 SM00382 ATPases associated with a variety of cellular activities DJ572_07320 SM00382 ATPases associated with a variety of cellular activities DJ572_07325 SM01066 Carbohydrate binding domain DJ572_07330 SM00420 helix_turn_helix, Deoxyribose operon repressor DJ572_07330 SM01134 DJ572_07330 DJ572_07355 SM00382 ATPases associated with a variety of cellular activities DJ572_07380 SM00966 SpoVT / AbrB like domain DJ572_07385 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) DJ572_07385 SM00091 PAS domain DJ572_07385 SM00387 Histidine kinase-like ATPases DJ572_07385 SM00388 His Kinase A (phosphoacceptor) domain DJ572_07405 SM00849 Metallo-beta-lactamase superfamily DJ572_07440 SM00861 Transketolase, pyrimidine binding domain DJ572_07535 SM00838 Elongation factor G C-terminus DJ572_07555 SM00670 Large family of predicted nucleotide-binding domains DJ572_07580 SM00878 Biotin carboxylase C-terminal domain DJ572_07625 SM00116 Domain in cystathionine beta-synthase and other proteins. DJ572_07675 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. DJ572_07735 SM00740 DJ572_07735 DJ572_07740 SM00740 DJ572_07740 DJ572_07795 SM00842 Cell division protein FtsA DJ572_07800 SM00864 Tubulin/FtsZ family, GTPase domain DJ572_07800 SM00865 Tubulin/FtsZ family, C-terminal domain DJ572_07825 SM00382 ATPases associated with a variety of cellular activities DJ572_07860 SM00363 S4 RNA-binding domain DJ572_07885 SM00363 S4 RNA-binding domain DJ572_07910 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain DJ572_07915 SM00851 MGS-like domain DJ572_07915 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain DJ572_07915 SM01209 DJ572_07915 DJ572_07930 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family DJ572_07980 SM00831 Cation transporter/ATPase, N-terminus DJ572_07995 SM00072 Guanylate kinase homologues. DJ572_08000 SM01409 DJ572_08000 DJ572_08010 SM00487 DEAD-like helicases superfamily DJ572_08010 SM00490 helicase superfamily c-terminal domain DJ572_08035 SM00331 Sigma factor PP2C-like phosphatases DJ572_08035 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain DJ572_08040 SM00220 Serine/Threonine protein kinases, catalytic domain DJ572_08040 SM00740 DJ572_08040 DJ572_08055 SM00983 Thiamin pyrophosphokinase, vitamin B1 binding domain DJ572_08075 SM01120 DJ572_08075 DJ572_08075 SM01121 DJ572_08075 DJ572_08090 SM00487 DEAD-like helicases superfamily DJ572_08090 SM00490 helicase superfamily c-terminal domain DJ572_08110 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. DJ572_08115 SM00822 DJ572_08115 DJ572_08125 SM00358 Double-stranded RNA binding motif DJ572_08125 SM00535 Ribonuclease III family DJ572_08130 SM00968 SMC proteins Flexible Hinge Domain DJ572_08135 SM00382 ATPases associated with a variety of cellular activities DJ572_08135 SM00962 SRP54-type protein, GTPase domain DJ572_08135 SM00963 SRP54-type protein, helical bundle domain DJ572_08150 SM00382 ATPases associated with a variety of cellular activities DJ572_08150 SM00962 SRP54-type protein, GTPase domain DJ572_08150 SM00963 SRP54-type protein, helical bundle domain DJ572_08210 SM00881 CoA binding domain DJ572_08220 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain DJ572_08220 SM00437 Bacterial DNA topoisomerase I DNA-binding domain DJ572_08220 SM00493 DJ572_08220 DJ572_08240 SM00382 ATPases associated with a variety of cellular activities DJ572_08240 SM01086 C-terminal, D2-small domain, of ClpB protein DJ572_08280 SM00382 ATPases associated with a variety of cellular activities DJ572_08330 SM00448 cheY-homologous receiver domain DJ572_08365 SM00962 SRP54-type protein, GTPase domain DJ572_08375 SM00448 cheY-homologous receiver domain DJ572_08380 SM00073 Histidine Phosphotransfer domain DJ572_08380 SM00260 Two component signalling adaptor domain DJ572_08380 SM00387 Histidine kinase-like ATPases DJ572_08380 SM01231 DJ572_08380 DJ572_08385 SM00260 Two component signalling adaptor domain DJ572_08445 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. DJ572_08455 SM00479 DJ572_08455 DJ572_08455 SM00481 DNA polymerase alpha chain like domain DJ572_08465 SM00316 Ribosomal protein S1-like RNA-binding domain DJ572_08465 SM00322 K homology RNA-binding domain DJ572_08500 SM00904 Riboflavin kinase DJ572_08505 SM01387 DJ572_08505 DJ572_08510 SM00316 Ribosomal protein S1-like RNA-binding domain DJ572_08510 SM00322 K homology RNA-binding domain DJ572_08540 SM00859 Semialdehyde dehydrogenase, NAD binding domain DJ572_08550 SM01130 DJ572_08550 DJ572_08555 SM00849 Metallo-beta-lactamase superfamily DJ572_08570 SM00382 ATPases associated with a variety of cellular activities DJ572_08570 SM00843 DJ572_08570 DJ572_08575 SM00345 helix_turn_helix gluconate operon transcriptional repressor DJ572_08575 SM00866 DJ572_08575 DJ572_08610 SM00530 Helix-turn-helix XRE-family like proteins DJ572_08620 SM00852 Probable molybdopterin binding domain DJ572_08625 SM00382 ATPases associated with a variety of cellular activities DJ572_08635 SM00322 K homology RNA-binding domain DJ572_08635 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. DJ572_08650 SM00829 Enoylreductase DJ572_08660 SM00729 Elongator protein 3, MiaB family, Radical SAM DJ572_08675 SM00533 DNA-binding domain of DNA mismatch repair MUTS family DJ572_08675 SM00534 ATPase domain of DNA mismatch repair MUTS family DJ572_08680 SM00853 MutL C terminal dimerisation domain DJ572_08680 SM01340 DJ572_08680 DJ572_08700 SM00849 Metallo-beta-lactamase superfamily DJ572_08710 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. DJ572_08715 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. DJ572_08720 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. DJ572_08730 SM00825 Beta-ketoacyl synthase DJ572_08750 SM00822 DJ572_08750 DJ572_08750 SM00823 Phosphopantetheine attachment site DJ572_08750 SM00825 Beta-ketoacyl synthase DJ572_08750 SM00826 DJ572_08750 DJ572_08750 SM01294 DJ572_08750 DJ572_08755 SM00822 DJ572_08755 DJ572_08755 SM00823 Phosphopantetheine attachment site DJ572_08755 SM00825 Beta-ketoacyl synthase DJ572_08755 SM00826 DJ572_08755 DJ572_08755 SM01294 DJ572_08755 DJ572_08760 SM00822 DJ572_08760 DJ572_08760 SM00823 Phosphopantetheine attachment site DJ572_08760 SM00825 Beta-ketoacyl synthase DJ572_08760 SM00826 DJ572_08760 DJ572_08760 SM01294 DJ572_08760 DJ572_08765 SM00822 DJ572_08765 DJ572_08765 SM00823 Phosphopantetheine attachment site DJ572_08765 SM00825 Beta-ketoacyl synthase DJ572_08765 SM00826 DJ572_08765 DJ572_08765 SM01294 DJ572_08765 DJ572_08770 SM00823 Phosphopantetheine attachment site DJ572_08770 SM00825 Beta-ketoacyl synthase DJ572_08770 SM01294 DJ572_08770 DJ572_08785 SM00849 Metallo-beta-lactamase superfamily DJ572_08870 SM00646 DJ572_08870 DJ572_08875 SM00382 ATPases associated with a variety of cellular activities DJ572_08890 SM00422 helix_turn_helix, mercury resistance DJ572_08895 SM01230 DJ572_08895 DJ572_08910 SM00530 Helix-turn-helix XRE-family like proteins DJ572_08915 SM00530 Helix-turn-helix XRE-family like proteins DJ572_09020 SM00507 HNH nucleases DJ572_09100 SM00047 Lysozyme subfamily 2 DJ572_09140 SM00257 Lysin motif DJ572_09140 SM00644 DJ572_09140 DJ572_09190 SM00028 Tetratricopeptide repeats DJ572_09290 SM00318 Staphylococcal nuclease homologues DJ572_09300 SM01005 Alanine racemase, C-terminal domain DJ572_09430 SM00257 Lysin motif DJ572_09435 SM00857 Resolvase, N terminal domain DJ572_09445 SM00861 Transketolase, pyrimidine binding domain DJ572_09470 SM00448 cheY-homologous receiver domain DJ572_09540 SM01207 DJ572_09540 DJ572_09545 SM00881 CoA binding domain DJ572_09550 SM00387 Histidine kinase-like ATPases DJ572_09550 SM00433 TopoisomeraseII DJ572_09555 SM00434 DNA Topoisomerase IV DJ572_09570 SM01067 Cellulose binding domain DJ572_09585 SM00606 Cellulose Binding Domain Type IV DJ572_09630 SM00878 Biotin carboxylase C-terminal domain DJ572_09660 SM00823 Phosphopantetheine attachment site DJ572_09660 SM00824 Thioesterase DJ572_09665 SM00823 Phosphopantetheine attachment site DJ572_09670 SM00823 Phosphopantetheine attachment site DJ572_09670 SM01294 DJ572_09670 DJ572_09675 SM00823 Phosphopantetheine attachment site DJ572_09680 SM00823 Phosphopantetheine attachment site DJ572_09730 SM00829 Enoylreductase DJ572_09750 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase DJ572_09765 SM00822 DJ572_09765 DJ572_09810 SM00926 Molybdopterin oxidoreductase Fe4S4 domain DJ572_09835 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). DJ572_09835 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain DJ572_09855 SM00656 DJ572_09855 DJ572_09870 SM00835 Cupin DJ572_09980 SM00530 Helix-turn-helix XRE-family like proteins DJ572_10145 SM00860 SMI1 / KNR4 family DJ572_10165 SM00342 helix_turn_helix, arabinose operon control protein DJ572_10180 SM00849 Metallo-beta-lactamase superfamily DJ572_10185 SM00871 Bacterial transcription activator, effector binding domain DJ572_10200 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor DJ572_10240 SM00421 helix_turn_helix, Lux Regulon DJ572_10240 SM00448 cheY-homologous receiver domain DJ572_10250 SM00257 Lysin motif DJ572_10255 SM00341 Helicase and RNase D C-terminal DJ572_10255 SM00487 DEAD-like helicases superfamily DJ572_10255 SM00490 helicase superfamily c-terminal domain DJ572_10255 SM00956 DJ572_10255 DJ572_10345 SM00861 Transketolase, pyrimidine binding domain DJ572_10350 SM00327 von Willebrand factor (vWF) type A domain DJ572_10355 SM00382 ATPases associated with a variety of cellular activities DJ572_10365 SM00257 Lysin motif DJ572_10460 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. DJ572_10460 SM00245 tail specific protease DJ572_10495 SM00014 Acid phosphatase homologues DJ572_10545 SM00882 Coenzyme A transferase DJ572_10550 SM00882 Coenzyme A transferase DJ572_10610 SM00347 helix_turn_helix multiple antibiotic resistance protein DJ572_10650 SM00382 ATPases associated with a variety of cellular activities DJ572_10700 SM00567 E-Z type HEAT repeats DJ572_10700 SM00932 Scaffold protein Nfu/NifU N terminal DJ572_10705 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. DJ572_10725 SM00357 Cold shock protein domain DJ572_10765 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs DJ572_10765 SM00475 5'-3' exonuclease DJ572_10830 SM00354 helix_turn _helix lactose operon repressor DJ572_10845 SM00491 DJ572_10845 DJ572_10860 SM00981 DJ572_10860 DJ572_10890 SM00487 DEAD-like helicases superfamily DJ572_10890 SM00490 helicase superfamily c-terminal domain DJ572_10950 SM00478 endonuclease III DJ572_10950 SM00525 DJ572_10950 DJ572_10980 SM00479 DJ572_10980 DJ572_10980 SM00487 DEAD-like helicases superfamily DJ572_10980 SM00491 DJ572_10980 DJ572_11015 SM00851 MGS-like domain DJ572_11065 SM00914 DJ572_11065 DJ572_11070 SM00028 Tetratricopeptide repeats DJ572_11135 SM00138 Methyltransferase, chemotaxis proteins DJ572_11140 SM00562 DJ572_11140 DJ572_11170 SM00411 bacterial (prokaryotic) histone like domain DJ572_11225 SM00316 Ribosomal protein S1-like RNA-binding domain DJ572_11265 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase DJ572_11285 SM00257 Lysin motif DJ572_11295 SM00487 DEAD-like helicases superfamily DJ572_11295 SM00490 helicase superfamily c-terminal domain DJ572_11335 SM00091 PAS domain DJ572_11335 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain DJ572_11335 SM00387 Histidine kinase-like ATPases DJ572_11335 SM00388 His Kinase A (phosphoacceptor) domain DJ572_11340 SM00448 cheY-homologous receiver domain DJ572_11340 SM00862 Transcriptional regulatory protein, C terminal DJ572_11360 SM00363 S4 RNA-binding domain DJ572_11375 SM00936 Penicillin-binding protein 5, C-terminal domain DJ572_11525 SM00387 Histidine kinase-like ATPases DJ572_11535 SM00936 Penicillin-binding protein 5, C-terminal domain DJ572_11575 SM00919 Malic enzyme, NAD binding domain DJ572_11575 SM01274 DJ572_11575 DJ572_11590 SM00870 DJ572_11590 DJ572_11595 SM00530 Helix-turn-helix XRE-family like proteins DJ572_11700 SM00849 Metallo-beta-lactamase superfamily DJ572_11730 SM00849 Metallo-beta-lactamase superfamily DJ572_11740 SM01350 DJ572_11740 DJ572_11790 SM00382 ATPases associated with a variety of cellular activities DJ572_11800 SM00062 Bacterial periplasmic substrate-binding proteins DJ572_11800 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. DJ572_11810 SM00046 Diacylglycerol kinase catalytic domain (presumed) DJ572_11820 SM00422 helix_turn_helix, mercury resistance DJ572_11830 SM00861 Transketolase, pyrimidine binding domain DJ572_11850 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase DJ572_11860 SM00091 PAS domain DJ572_11860 SM00382 ATPases associated with a variety of cellular activities DJ572_11905 SM00646 DJ572_11905 DJ572_11920 SM00448 cheY-homologous receiver domain DJ572_11925 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. DJ572_11940 SM00363 S4 RNA-binding domain DJ572_11945 SM00861 Transketolase, pyrimidine binding domain DJ572_11980 SM00878 Biotin carboxylase C-terminal domain DJ572_12025 SM00382 ATPases associated with a variety of cellular activities DJ572_12035 SM00841 Elongation factor P, C-terminal DJ572_12035 SM01185 DJ572_12035 DJ572_12070 SM00529 Helix-turn-helix diphteria tox regulatory element DJ572_12080 SM00450 Rhodanese Homology Domain DJ572_12100 SM00487 DEAD-like helicases superfamily DJ572_12100 SM00490 helicase superfamily c-terminal domain DJ572_12115 SM00530 Helix-turn-helix XRE-family like proteins DJ572_12175 SM00382 ATPases associated with a variety of cellular activities DJ572_12190 SM01091 Transporter associated domain DJ572_12215 SM00849 Metallo-beta-lactamase superfamily DJ572_12235 SM00631 DJ572_12235 DJ572_12255 SM00028 Tetratricopeptide repeats DJ572_12295 SM00382 ATPases associated with a variety of cellular activities DJ572_12300 SM00382 ATPases associated with a variety of cellular activities DJ572_12345 SM00257 Lysin motif DJ572_12380 SM00518 AP endonuclease family 2 DJ572_12385 SM00487 DEAD-like helicases superfamily DJ572_12385 SM00490 helicase superfamily c-terminal domain DJ572_12425 SM00400 zinc finger DJ572_12425 SM00493 DJ572_12425 DJ572_12440 SM00116 Domain in cystathionine beta-synthase and other proteins. DJ572_12485 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. DJ572_12535 SM00729 Elongator protein 3, MiaB family, Radical SAM DJ572_12550 SM00271 DnaJ molecular chaperone homology domain DJ572_12570 SM00729 Elongator protein 3, MiaB family, Radical SAM DJ572_12575 SM00838 Elongation factor G C-terminus DJ572_12610 SM00849 Metallo-beta-lactamase superfamily DJ572_12620 SM00278 Helix-hairpin-helix DNA-binding motif class 1 DJ572_12640 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. DJ572_12650 SM01103 DJ572_12650 DJ572_12680 SM00644 DJ572_12680 DJ572_12690 SM01350 DJ572_12690 DJ572_12705 SM00347 helix_turn_helix multiple antibiotic resistance protein DJ572_12715 SM00857 Resolvase, N terminal domain DJ572_12735 SM00028 Tetratricopeptide repeats DJ572_12760 SM00028 Tetratricopeptide repeats DJ572_12775 SM00644 DJ572_12775 DJ572_12855 SM00388 His Kinase A (phosphoacceptor) domain DJ572_12860 SM00448 cheY-homologous receiver domain DJ572_12860 SM00862 Transcriptional regulatory protein, C terminal DJ572_12895 SM00450 Rhodanese Homology Domain DJ572_12895 SM00849 Metallo-beta-lactamase superfamily DJ572_12905 SM00450 Rhodanese Homology Domain DJ572_12945 SM00422 helix_turn_helix, mercury resistance DJ572_12960 SM01091 Transporter associated domain DJ572_13020 SM00344 helix_turn_helix ASNC type DJ572_13140 SM00287 Bacterial SH3 domain homologues DJ572_13180 SM00422 helix_turn_helix, mercury resistance DJ572_13190 SM00829 Enoylreductase DJ572_13200 SM00640 Glycosyl hydrolases family 32 DJ572_13225 SM00382 ATPases associated with a variety of cellular activities DJ572_13295 SM00926 Molybdopterin oxidoreductase Fe4S4 domain DJ572_13295 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region DJ572_13325 SM00650 Ribosomal RNA adenine dimethylases DJ572_13380 SM00732 Likely ribonuclease with RNase H fold. DJ572_13390 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain DJ572_13400 SM00382 ATPases associated with a variety of cellular activities DJ572_13405 SM00062 Bacterial periplasmic substrate-binding proteins DJ572_13405 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. DJ572_13435 SM00382 ATPases associated with a variety of cellular activities DJ572_13440 SM00028 Tetratricopeptide repeats DJ572_13460 SM00382 ATPases associated with a variety of cellular activities DJ572_13490 SM00287 Bacterial SH3 domain homologues DJ572_13490 SM00646 DJ572_13490 DJ572_13500 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. DJ572_13500 SM00954 Region found in RelA / SpoT proteins DJ572_13550 SM01323 DJ572_13550 DJ572_13570 SM00382 ATPases associated with a variety of cellular activities DJ572_13575 SM00278 Helix-hairpin-helix DNA-binding motif class 1 DJ572_13625 SM00257 Lysin motif DJ572_13670 SM01317 DJ572_13670 DJ572_13765 SM00257 Lysin motif DJ572_13775 SM01004 Delta-aminolevulinic acid dehydratase DJ572_13810 SM00382 ATPases associated with a variety of cellular activities DJ572_13810 SM00464 Found in ATP-dependent protease La (LON) DJ572_13815 SM00382 ATPases associated with a variety of cellular activities DJ572_13820 SM00382 ATPases associated with a variety of cellular activities DJ572_13820 SM00994 ClpX C4-type zinc finger DJ572_13820 SM01086 C-terminal, D2-small domain, of ClpB protein DJ572_13845 SM01329 DJ572_13845 DJ572_13850 SM00917 LeuA allosteric (dimerisation) domain DJ572_13905 SM00909 Sporulation and spore germination DJ572_13915 SM00347 helix_turn_helix multiple antibiotic resistance protein DJ572_13920 SM00421 helix_turn_helix, Lux Regulon DJ572_13960 SM00465 GIY-YIG type nucleases (URI domain) DJ572_13975 SM00813 Alpha-L-arabinofuranosidase C-terminus DJ572_13980 SM00893 Electron transfer flavoprotein domain DJ572_13985 SM00893 Electron transfer flavoprotein domain DJ572_14010 SM00463 Small MutS-related domain DJ572_14010 SM00533 DNA-binding domain of DNA mismatch repair MUTS family DJ572_14010 SM00534 ATPase domain of DNA mismatch repair MUTS family DJ572_14015 SM00278 Helix-hairpin-helix DNA-binding motif class 1 DJ572_14015 SM00481 DNA polymerase alpha chain like domain DJ572_14015 SM00483 DNA polymerase X family DJ572_14035 SM00873 B3/4 domain DJ572_14035 SM00874 tRNA synthetase B5 domain DJ572_14035 SM00896 Ferredoxin-fold anticodon binding domain DJ572_14050 SM00967 RNA 2'-O ribose methyltransferase substrate binding DJ572_14090 SM00813 Alpha-L-arabinofuranosidase C-terminus DJ572_14120 SM01007 Class II Aldolase and Adducin N-terminal domain DJ572_14185 SM00448 cheY-homologous receiver domain DJ572_14185 SM00850 LytTr DNA-binding domain DJ572_14190 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. DJ572_14190 SM00387 Histidine kinase-like ATPases DJ572_14200 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain DJ572_14215 SM00382 ATPases associated with a variety of cellular activities DJ572_14235 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain DJ572_14265 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain DJ572_14265 SM01232 DJ572_14265 DJ572_14270 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs DJ572_14270 SM00474 3'-5' exonuclease DJ572_14270 SM00475 5'-3' exonuclease DJ572_14270 SM00482 DNA polymerase A domain DJ572_14275 SM00091 PAS domain DJ572_14275 SM00387 Histidine kinase-like ATPases DJ572_14275 SM00388 His Kinase A (phosphoacceptor) domain DJ572_14280 SM00448 cheY-homologous receiver domain DJ572_14280 SM00862 Transcriptional regulatory protein, C terminal DJ572_14295 SM01329 DJ572_14295 DJ572_14340 SM00919 Malic enzyme, NAD binding domain DJ572_14340 SM01274 DJ572_14340 DJ572_14345 SM00481 DNA polymerase alpha chain like domain DJ572_14375 SM00116 Domain in cystathionine beta-synthase and other proteins. DJ572_14390 SM00904 Riboflavin kinase DJ572_14410 SM00382 ATPases associated with a variety of cellular activities DJ572_14425 SM00062 Bacterial periplasmic substrate-binding proteins DJ572_14430 SM00062 Bacterial periplasmic substrate-binding proteins DJ572_14445 SM00849 Metallo-beta-lactamase superfamily DJ572_14470 SM00852 Probable molybdopterin binding domain DJ572_14535 SM00981 DJ572_14535 DJ572_14565 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. DJ572_14570 SM00267 diguanylate cyclase DJ572_14580 SM00363 S4 RNA-binding domain DJ572_14580 SM01390 DJ572_14580 DJ572_14585 SM00363 S4 RNA-binding domain DJ572_14605 SM00116 Domain in cystathionine beta-synthase and other proteins. DJ572_14625 SM00354 helix_turn _helix lactose operon repressor DJ572_14630 SM00830 Chorismate mutase type II DJ572_14655 SM00382 ATPases associated with a variety of cellular activities DJ572_14655 SM00843 DJ572_14655 DJ572_14690 SM00919 Malic enzyme, NAD binding domain DJ572_14690 SM01274 DJ572_14690 DJ572_14695 SM00849 Metallo-beta-lactamase superfamily DJ572_14715 SM00642 Alpha-amylase domain DJ572_14720 SM00046 Diacylglycerol kinase catalytic domain (presumed) DJ572_14755 SM00382 ATPases associated with a variety of cellular activities DJ572_14760 SM00420 helix_turn_helix, Deoxyribose operon repressor DJ572_14765 SM00363 S4 RNA-binding domain DJ572_14815 SM00342 helix_turn_helix, arabinose operon control protein DJ572_14840 SM00729 Elongator protein 3, MiaB family, Radical SAM DJ572_14840 SM00876 Biotin and Thiamin Synthesis associated domain DJ572_14870 SM00354 helix_turn _helix lactose operon repressor DJ572_14895 SM00450 Rhodanese Homology Domain DJ572_14910 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) DJ572_14910 SM00091 PAS domain DJ572_14930 SM00382 ATPases associated with a variety of cellular activities DJ572_14935 SM00387 Histidine kinase-like ATPases DJ572_14940 SM00448 cheY-homologous receiver domain DJ572_14940 SM00862 Transcriptional regulatory protein, C terminal DJ572_14950 SM00382 ATPases associated with a variety of cellular activities DJ572_14965 SM00382 ATPases associated with a variety of cellular activities DJ572_14970 SM00345 helix_turn_helix gluconate operon transcriptional repressor DJ572_14980 SM00729 Elongator protein 3, MiaB family, Radical SAM DJ572_15040 SM00382 ATPases associated with a variety of cellular activities DJ572_15080 SM01234 DJ572_15080 DJ572_15085 SM00947 Carbonic anhydrase DJ572_15120 SM00382 ATPases associated with a variety of cellular activities DJ572_15130 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain DJ572_15170 SM00984 UDP binding domain DJ572_15230 SM00642 Alpha-amylase domain DJ572_15365 SM00244 prohibitin homologues DJ572_15420 SM00047 Lysozyme subfamily 2 DJ572_15470 SM00420 helix_turn_helix, Deoxyribose operon repressor DJ572_15470 SM01134 DJ572_15470 DJ572_15475 SM01007 Class II Aldolase and Adducin N-terminal domain DJ572_15485 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). DJ572_15485 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain DJ572_15485 SM00319 Homologues of the ligand binding domain of Tar DJ572_15490 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). DJ572_15490 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain DJ572_15490 SM00319 Homologues of the ligand binding domain of Tar DJ572_15495 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). DJ572_15495 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain DJ572_15495 SM00319 Homologues of the ligand binding domain of Tar DJ572_15500 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). DJ572_15500 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain DJ572_15500 SM00319 Homologues of the ligand binding domain of Tar DJ572_15520 SM00642 Alpha-amylase domain DJ572_15525 SM01091 Transporter associated domain DJ572_15580 SM00316 Ribosomal protein S1-like RNA-binding domain DJ572_15590 SM00344 helix_turn_helix ASNC type DJ572_15610 SM00387 Histidine kinase-like ATPases DJ572_15610 SM00388 His Kinase A (phosphoacceptor) domain DJ572_15615 SM01298 DJ572_15615 DJ572_15620 SM00479 DJ572_15620 DJ572_15650 SM00091 PAS domain DJ572_15650 SM00387 Histidine kinase-like ATPases DJ572_15655 SM00448 cheY-homologous receiver domain DJ572_15665 SM00382 ATPases associated with a variety of cellular activities DJ572_15730 SM00421 helix_turn_helix, Lux Regulon DJ572_15730 SM00448 cheY-homologous receiver domain DJ572_15735 SM00387 Histidine kinase-like ATPases DJ572_15760 SM00052 Putative diguanylate phosphodiesterase DJ572_15805 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. DJ572_15850 SM01002 Alanine dehydrogenase/PNT, C-terminal domain DJ572_15850 SM01003 Alanine dehydrogenase/PNT, N-terminal domain DJ572_15860 SM00923 MbtH-like protein DJ572_15865 SM00823 Phosphopantetheine attachment site DJ572_15865 SM00824 Thioesterase DJ572_15950 SM01240 DJ572_15950 DJ572_16050 SM00729 Elongator protein 3, MiaB family, Radical SAM DJ572_16130 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain DJ572_16165 SM00382 ATPases associated with a variety of cellular activities DJ572_16170 SM00345 helix_turn_helix gluconate operon transcriptional repressor DJ572_16170 SM00866 DJ572_16170 DJ572_16200 SM00465 GIY-YIG type nucleases (URI domain) DJ572_16240 SM00382 ATPases associated with a variety of cellular activities DJ572_16270 SM00382 ATPases associated with a variety of cellular activities DJ572_16270 SM00930 DJ572_16270 DJ572_16285 SM00493 DJ572_16285 DJ572_16340 SM00347 helix_turn_helix multiple antibiotic resistance protein DJ572_16370 SM00382 ATPases associated with a variety of cellular activities DJ572_16395 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. DJ572_16400 SM00448 cheY-homologous receiver domain DJ572_16400 SM00862 Transcriptional regulatory protein, C terminal DJ572_16405 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain DJ572_16405 SM00387 Histidine kinase-like ATPases DJ572_16405 SM00388 His Kinase A (phosphoacceptor) domain DJ572_16445 SM00421 helix_turn_helix, Lux Regulon DJ572_16445 SM00448 cheY-homologous receiver domain DJ572_16450 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain DJ572_16450 SM00387 Histidine kinase-like ATPases DJ572_16485 SM00382 ATPases associated with a variety of cellular activities DJ572_16510 SM00387 Histidine kinase-like ATPases DJ572_16510 SM00388 His Kinase A (phosphoacceptor) domain DJ572_16515 SM00448 cheY-homologous receiver domain DJ572_16515 SM00862 Transcriptional regulatory protein, C terminal DJ572_16535 SM00835 Cupin DJ572_16550 SM00382 ATPases associated with a variety of cellular activities DJ572_16560 SM00382 ATPases associated with a variety of cellular activities DJ572_16730 SM00316 Ribosomal protein S1-like RNA-binding domain DJ572_16730 SM00357 Cold shock protein domain DJ572_16730 SM00955 DJ572_16730 DJ572_16750 SM00530 Helix-turn-helix XRE-family like proteins DJ572_16755 SM00530 Helix-turn-helix XRE-family like proteins DJ572_16760 SM00530 Helix-turn-helix XRE-family like proteins DJ572_16770 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). DJ572_16770 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain DJ572_16790 SM00116 Domain in cystathionine beta-synthase and other proteins. DJ572_16790 SM00382 ATPases associated with a variety of cellular activities DJ572_16815 SM00116 Domain in cystathionine beta-synthase and other proteins. DJ572_16815 SM00382 ATPases associated with a variety of cellular activities DJ572_16850 SM01192 DJ572_16850 DJ572_16850 SM01193 DJ572_16850 DJ572_16870 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain DJ572_16885 SM00345 helix_turn_helix gluconate operon transcriptional repressor DJ572_16915 SM00636 DJ572_16915 DJ572_16935 SM00421 helix_turn_helix, Lux Regulon DJ572_16935 SM00448 cheY-homologous receiver domain DJ572_16950 SM00382 ATPases associated with a variety of cellular activities DJ572_16960 SM00331 Sigma factor PP2C-like phosphatases DJ572_16990 SM00354 helix_turn _helix lactose operon repressor DJ572_16995 SM00345 helix_turn_helix gluconate operon transcriptional repressor DJ572_16995 SM00895 DJ572_16995 DJ572_17090 SM00530 Helix-turn-helix XRE-family like proteins DJ572_17130 SM00640 Glycosyl hydrolases family 32 DJ572_17185 SM00642 Alpha-amylase domain DJ572_17215 SM00642 Alpha-amylase domain DJ572_17220 SM00354 helix_turn _helix lactose operon repressor DJ572_17240 SM00947 Carbonic anhydrase DJ572_17255 SM00382 ATPases associated with a variety of cellular activities DJ572_17260 SM00387 Histidine kinase-like ATPases DJ572_17265 SM00448 cheY-homologous receiver domain DJ572_17265 SM00862 Transcriptional regulatory protein, C terminal DJ572_17315 SM00028 Tetratricopeptide repeats DJ572_17320 SM00382 ATPases associated with a variety of cellular activities DJ572_17425 SM00345 helix_turn_helix gluconate operon transcriptional repressor DJ572_17425 SM00866 DJ572_17425 DJ572_17435 SM00347 helix_turn_helix multiple antibiotic resistance protein DJ572_17450 SM00347 helix_turn_helix multiple antibiotic resistance protein DJ572_17490 SM00382 ATPases associated with a variety of cellular activities DJ572_17495 SM00487 DEAD-like helicases superfamily DJ572_17495 SM00490 helicase superfamily c-terminal domain DJ572_17520 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. DJ572_17530 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. DJ572_17530 SM00245 tail specific protease DJ572_17540 SM00382 ATPases associated with a variety of cellular activities DJ572_17560 SM00957 SecA DEAD-like domain DJ572_17560 SM00958 SecA preprotein cross-linking domain DJ572_17650 SM00487 DEAD-like helicases superfamily DJ572_17650 SM00490 helicase superfamily c-terminal domain DJ572_17660 SM00421 helix_turn_helix, Lux Regulon DJ572_17660 SM00448 cheY-homologous receiver domain DJ572_17665 SM00387 Histidine kinase-like ATPases DJ572_17705 SM00984 UDP binding domain DJ572_17730 SM00646 DJ572_17730 DJ572_17775 SM00382 ATPases associated with a variety of cellular activities DJ572_17845 SM00047 Lysozyme subfamily 2 DJ572_17845 SM00287 Bacterial SH3 domain homologues DJ572_17895 SM00854 Bacterial capsule synthesis protein PGA_cap DJ572_17915 SM00354 helix_turn _helix lactose operon repressor DJ572_17930 SM00382 ATPases associated with a variety of cellular activities DJ572_17945 SM00287 Bacterial SH3 domain homologues DJ572_18000 SM00903 Flavin reductase like domain DJ572_18015 SM00344 helix_turn_helix ASNC type DJ572_18080 SM00984 UDP binding domain DJ572_18110 SM00487 DEAD-like helicases superfamily DJ572_18110 SM00490 helicase superfamily c-terminal domain DJ572_18125 SM00420 helix_turn_helix, Deoxyribose operon repressor DJ572_18125 SM01134 DJ572_18125 DJ572_18155 SM00448 cheY-homologous receiver domain DJ572_18155 SM00862 Transcriptional regulatory protein, C terminal DJ572_18160 SM00387 Histidine kinase-like ATPases DJ572_18160 SM00388 His Kinase A (phosphoacceptor) domain DJ572_18160 SM00448 cheY-homologous receiver domain DJ572_18175 SM00028 Tetratricopeptide repeats DJ572_18205 SM00347 helix_turn_helix multiple antibiotic resistance protein DJ572_18215 SM00710 Parallel beta-helix repeats DJ572_18215 SM00722 Domain present in carbohydrate binding proteins and sugar hydrolses DJ572_18245 SM00938 Nitrogen regulatory protein P-II DJ572_18250 SM00014 Acid phosphatase homologues DJ572_18280 SM00155 Phospholipase D. Active site motifs. DJ572_18285 SM00422 helix_turn_helix, mercury resistance DJ572_18345 SM00028 Tetratricopeptide repeats DJ572_18355 SM00729 Elongator protein 3, MiaB family, Radical SAM DJ572_18370 SM00327 von Willebrand factor (vWF) type A domain DJ572_18380 SM00327 von Willebrand factor (vWF) type A domain DJ572_18415 SM00382 ATPases associated with a variety of cellular activities DJ572_18475 SM00226 Low molecular weight phosphatase family DJ572_18515 SM00937 DJ572_18515 DJ572_18535 SM00919 Malic enzyme, NAD binding domain DJ572_18535 SM01274 DJ572_18535 DJ572_18550 SM00357 Cold shock protein domain DJ572_18550 SM00382 ATPases associated with a variety of cellular activities DJ572_18550 SM00959 Rho termination factor, N-terminal domain DJ572_18575 SM00448 cheY-homologous receiver domain DJ572_18605 SM00155 Phospholipase D. Active site motifs. DJ572_18625 SM00382 ATPases associated with a variety of cellular activities DJ572_18630 SM00155 Phospholipase D. Active site motifs. DJ572_18655 SM00926 Molybdopterin oxidoreductase Fe4S4 domain DJ572_18670 SM00100 Cyclic nucleotide-monophosphate binding domain DJ572_18670 SM00419 helix_turn_helix, cAMP Regulatory protein DJ572_18680 SM00836 DALR anticodon binding domain DJ572_18680 SM01016 Arginyl tRNA synthetase N terminal dom DJ572_18700 SM00729 Elongator protein 3, MiaB family, Radical SAM DJ572_18750 SM00028 Tetratricopeptide repeats DJ572_18780 SM00382 ATPases associated with a variety of cellular activities DJ572_18825 SM00347 helix_turn_helix multiple antibiotic resistance protein DJ572_18830 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain DJ572_18850 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. DJ572_18945 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase DJ572_18985 SM00858 DJ572_18985 DJ572_19040 SM00986 Uracil DNA glycosylase superfamily DJ572_19040 SM00987 UreE urease accessory protein, C-terminal domain DJ572_19060 SM00640 Glycosyl hydrolases family 32 DJ572_19075 SM01061 CAT RNA binding domain DJ572_19225 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase DJ572_19250 SM01061 CAT RNA binding domain DJ572_19265 SM00347 helix_turn_helix multiple antibiotic resistance protein DJ572_19270 SM00363 S4 RNA-binding domain DJ572_19280 SM00530 Helix-turn-helix XRE-family like proteins DJ572_19295 SM00954 Region found in RelA / SpoT proteins DJ572_19380 SM01060 DJ572_19380 DJ572_19395 SM00382 ATPases associated with a variety of cellular activities DJ572_19430 SM00382 ATPases associated with a variety of cellular activities DJ572_19435 SM00382 ATPases associated with a variety of cellular activities DJ572_19470 SM00382 ATPases associated with a variety of cellular activities DJ572_19520 SM00421 helix_turn_helix, Lux Regulon DJ572_19520 SM00448 cheY-homologous receiver domain DJ572_19555 SM00882 Coenzyme A transferase DJ572_19560 SM00882 Coenzyme A transferase DJ572_19590 SM01060 DJ572_19590 DJ572_19605 SM01061 CAT RNA binding domain DJ572_19620 SM00487 DEAD-like helicases superfamily DJ572_19620 SM00490 helicase superfamily c-terminal domain DJ572_19680 SM00860 SMI1 / KNR4 family DJ572_19740 SM00941 Pyrimidine nucleoside phosphorylase C-terminal domain DJ572_19750 SM01133 DJ572_19750 DJ572_19780 SM00382 ATPases associated with a variety of cellular activities DJ572_19790 SM00062 Bacterial periplasmic substrate-binding proteins DJ572_19860 SM00382 ATPases associated with a variety of cellular activities DJ572_19865 SM00387 Histidine kinase-like ATPases DJ572_19870 SM00448 cheY-homologous receiver domain DJ572_19870 SM00862 Transcriptional regulatory protein, C terminal DJ572_19925 SM00420 helix_turn_helix, Deoxyribose operon repressor DJ572_19925 SM01134 DJ572_19925 DJ572_19950 SM00387 Histidine kinase-like ATPases DJ572_19980 SM00558 A domain family that is part of the cupin metalloenzyme superfamily. DJ572_20010 SM00564 beta-propeller repeat DJ572_20045 SM00347 helix_turn_helix multiple antibiotic resistance protein DJ572_20070 SM00345 helix_turn_helix gluconate operon transcriptional repressor DJ572_20070 SM00895 DJ572_20070 DJ572_20085 SM01350 DJ572_20085 DJ572_20120 SM00345 helix_turn_helix gluconate operon transcriptional repressor DJ572_20120 SM00866 DJ572_20120 DJ572_20235 SM00091 PAS domain DJ572_20235 SM00382 ATPases associated with a variety of cellular activities DJ572_20240 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain DJ572_20240 SM00387 Histidine kinase-like ATPases DJ572_20240 SM00388 His Kinase A (phosphoacceptor) domain DJ572_20245 SM00448 cheY-homologous receiver domain DJ572_20245 SM00862 Transcriptional regulatory protein, C terminal DJ572_20260 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. DJ572_20265 SM00849 Metallo-beta-lactamase superfamily DJ572_20280 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) DJ572_20280 SM00091 PAS domain DJ572_20280 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain DJ572_20280 SM00387 Histidine kinase-like ATPases DJ572_20280 SM00388 His Kinase A (phosphoacceptor) domain DJ572_20285 SM00448 cheY-homologous receiver domain DJ572_20285 SM00862 Transcriptional regulatory protein, C terminal DJ572_20310 SM00788 Adenylosuccinate synthetase DJ572_20320 SM00382 ATPases associated with a variety of cellular activities DJ572_20355 SM00267 diguanylate cyclase DJ572_20380 SM01131 DJ572_20380 DJ572_20400 SM00422 helix_turn_helix, mercury resistance DJ572_20445 SM00849 Metallo-beta-lactamase superfamily DJ572_20450 SM00347 helix_turn_helix multiple antibiotic resistance protein DJ572_20500 SM00226 Low molecular weight phosphatase family DJ572_20515 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor DJ572_20520 SM00857 Resolvase, N terminal domain DJ572_20615 SM00530 Helix-turn-helix XRE-family like proteins DJ572_20625 SM00028 Tetratricopeptide repeats DJ572_20660 SM01266 DJ572_20660 DJ572_20670 SM00354 helix_turn _helix lactose operon repressor DJ572_20700 SM00926 Molybdopterin oxidoreductase Fe4S4 domain DJ572_20720 SM00470 ParB-like nuclease domain DJ572_20735 SM00470 ParB-like nuclease domain DJ572_20745 SM01228 DJ572_20745 DJ572_20755 SM00322 K homology RNA-binding domain DJ572_20755 SM00393 Putative single-stranded nucleic acids-binding domain DJ572_20755 SM01245 DJ572_20755 DJ572_20775 SM00382 ATPases associated with a variety of cellular activities DJ572_20775 SM00760 Bacterial dnaA protein helix-turn-helix domain DJ572_20780 SM00480 DNA polymerase III beta subunit DJ572_20800 SM00387 Histidine kinase-like ATPases DJ572_20800 SM00433 TopoisomeraseII DJ572_20805 SM00434 DNA Topoisomerase IV DJ572_20840 SM00116 Domain in cystathionine beta-synthase and other proteins. DJ572_20840 SM01240 DJ572_20840 DJ572_20845 SM00936 Penicillin-binding protein 5, C-terminal domain DJ572_20885 SM00257 Lysin motif DJ572_20885 SM00636 DJ572_20885 DJ572_20905 SM00382 ATPases associated with a variety of cellular activities DJ572_20915 SM00493 DJ572_20915 DJ572_21010 SM00465 GIY-YIG type nucleases (URI domain) DJ572_21020 SM00966 SpoVT / AbrB like domain DJ572_21035 SM01208 DJ572_21035 DJ572_21040 SM00493 DJ572_21040 DJ572_21045 SM00650 Ribosomal RNA adenine dimethylases DJ572_21090 SM01400 DJ572_21090 DJ572_21110 SM00487 DEAD-like helicases superfamily DJ572_21110 SM00490 helicase superfamily c-terminal domain DJ572_21110 SM00982 DJ572_21110 DJ572_21110 SM01058 CarD-like/TRCF domain DJ572_21115 SM00966 SpoVT / AbrB like domain DJ572_21130 SM00363 S4 RNA-binding domain DJ572_21150 SM00316 Ribosomal protein S1-like RNA-binding domain DJ572_21165 SM00331 Sigma factor PP2C-like phosphatases DJ572_21165 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain DJ572_21175 SM00220 Serine/Threonine protein kinases, catalytic domain DJ572_21180 SM00977 TilS substrate C-terminal domain DJ572_21190 SM00382 ATPases associated with a variety of cellular activities DJ572_21235 SM00905 Dihydroneopterin aldolase DJ572_21245 SM00530 Helix-turn-helix XRE-family like proteins