locus-tag class description NYR91_00005 PF00308 Bacterial dnaA protein NYR91_00005 PF08299 Bacterial dnaA protein helix-turn-helix NYR91_00005 PF11638 DnaA N-terminal domain NYR91_00010 PF00712 DNA polymerase III beta subunit, N-terminal domain NYR91_00010 PF02767 DNA polymerase III beta subunit, central domain NYR91_00010 PF02768 DNA polymerase III beta subunit, C-terminal domain NYR91_00020 PF02463 RecF/RecN/SMC N terminal domain NYR91_00025 PF04025 Domain of unknown function (DUF370) NYR91_00030 PF00204 DNA gyrase B NYR91_00030 PF00986 DNA gyrase B subunit, carboxyl terminus NYR91_00030 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NYR91_00030 PF01751 Toprim domain NYR91_00035 PF03989 DNA gyrase C-terminal domain, beta-propeller NYR91_00035 PF00521 DNA gyrase/topoisomerase IV, subunit A NYR91_00065 PF14175 YaaC-like Protein NYR91_00070 PF00478 IMP dehydrogenase / GMP reductase domain NYR91_00070 PF00571 CBS domain NYR91_00075 PF07943 Penicillin-binding protein 5, C-terminal domain NYR91_00075 PF00768 D-alanyl-D-alanine carboxypeptidase NYR91_00080 PF01680 SOR/SNZ family NYR91_00085 PF01174 SNO glutamine amidotransferase family NYR91_00090 PF02403 Seryl-tRNA synthetase N-terminal domain NYR91_00090 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) NYR91_00100 PF01712 Deoxynucleoside kinase NYR91_00105 PF01712 Deoxynucleoside kinase NYR91_00110 PF00704 Glycosyl hydrolases family 18 NYR91_00110 PF01476 LysM domain NYR91_00115 PF00857 Isochorismatase family NYR91_00120 PF14437 MafB19-like deaminase NYR91_00130 PF12169 DNA polymerase III subunits gamma and tau domain III NYR91_00135 PF02575 YbaB/EbfC DNA-binding family NYR91_00140 PF13662 Toprim domain NYR91_00140 PF02132 RecR protein NYR91_00145 PF10704 Protein of unknown function (DUF2508) NYR91_00150 PF07441 SigmaK-factor processing regulatory protein BofA NYR91_00180 PF10764 Inhibitor of sigma-G Gin NYR91_00185 PF10112 5-bromo-4-chloroindolyl phosphate hydrolysis protein NYR91_00190 PF05816 Toxic anion resistance protein (TelA) NYR91_00195 PF01276 Orn/Lys/Arg decarboxylase, major domain NYR91_00195 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain NYR91_00200 PF02223 Thymidylate kinase NYR91_00205 PF06153 Cyclic-di-AMP receptor NYR91_00210 PF03885 Protein of unknown function (DUF327) NYR91_00215 PF09115 DNA polymerase III, delta subunit, C terminal NYR91_00220 PF04468 PSP1 C-terminal conserved region NYR91_00225 PF06156 Initiation control protein YabA NYR91_00230 PF05175 Methyltransferase small domain NYR91_00235 PF01541 GIY-YIG catalytic domain NYR91_00240 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases NYR91_00245 PF18277 AbrB C-terminal domain NYR91_00245 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin NYR91_00250 PF08264 Anticodon-binding domain of tRNA NYR91_00250 PF09334 tRNA synthetases class I (M) NYR91_00250 PF01588 Putative tRNA binding domain NYR91_00255 PF01026 TatD related DNase NYR91_00260 PF06725 3D domain NYR91_00260 PF03990 G5-linked-Ubiquitin-like domain NYR91_00260 PF07501 G5 domain NYR91_00265 PF13331 Domain of unknown function (DUF4093) NYR91_00265 PF13662 Toprim domain NYR91_00270 PF00398 Ribosomal RNA adenine dimethylase NYR91_00275 PF05582 YabG peptidase U57 NYR91_00280 PF06257 Biofilm formation stimulator VEG NYR91_00285 PF00269 Small, acid-soluble spore proteins, alpha/beta type NYR91_00290 PF08544 GHMP kinases C terminal NYR91_00290 PF00288 GHMP kinases N terminal domain NYR91_00295 PF09182 Bacterial purine repressor, N-terminal NYR91_00295 PF00156 Phosphoribosyl transferase domain NYR91_00300 PF01042 Endoribonuclease L-PSP NYR91_00305 PF04026 SpoVG NYR91_00310 PF00132 Bacterial transferase hexapeptide (six repeats) NYR91_00310 PF00483 Nucleotidyl transferase NYR91_00315 PF14572 Phosphoribosyl synthetase-associated domain NYR91_00315 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase NYR91_00320 PF14693 Ribosomal protein TL5, C-terminal domain NYR91_00320 PF01386 Ribosomal L25p family NYR91_00325 PF01195 Peptidyl-tRNA hydrolase NYR91_00330 PF10955 Protein of unknown function (DUF2757) NYR91_00335 PF17757 UvrB interaction domain NYR91_00335 PF02559 CarD-like/TRCF domain NYR91_00335 PF00270 DEAD/DEAH box helicase NYR91_00335 PF00271 Helicase conserved C-terminal domain NYR91_00335 PF03461 TRCF domain NYR91_00340 PF15714 Stage V sporulation protein T C-terminal, transcription factor NYR91_00340 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin NYR91_00345 PF01943 Polysaccharide biosynthesis protein NYR91_00345 PF14667 Polysaccharide biosynthesis C-terminal domain NYR91_00350 PF03819 MazG nucleotide pyrophosphohydrolase domain NYR91_00350 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases NYR91_00355 PF01479 S4 domain NYR91_00360 PF07873 YabP family NYR91_00365 PF09578 Spore cortex protein YabQ (Spore_YabQ) NYR91_00370 PF04977 Septum formation initiator NYR91_00375 PF00575 S1 RNA binding domain NYR91_00390 PF07228 Stage II sporulation protein E (SpoIIE) NYR91_00395 PF00092 von Willebrand factor type A domain NYR91_00400 PF00069 Protein kinase domain NYR91_00405 PF01171 PP-loop family NYR91_00405 PF09179 TilS substrate binding domain NYR91_00405 PF11734 TilS substrate C-terminal domain NYR91_00410 PF00156 Phosphoribosyl transferase domain NYR91_00415 PF00004 ATPase family associated with various cellular activities (AAA) NYR91_00415 PF17862 AAA+ lid domain NYR91_00415 PF06480 FtsH Extracellular NYR91_00415 PF01434 Peptidase family M41 NYR91_00420 PF03309 Type III pantothenate kinase NYR91_00425 PF01430 Hsp33 protein NYR91_00430 PF13145 PPIC-type PPIASE domain NYR91_00435 PF00291 Pyridoxal-phosphate dependent enzyme NYR91_00440 PF04715 Anthranilate synthase component I, N terminal region NYR91_00440 PF00425 chorismate binding enzyme NYR91_00445 PF00117 Glutamine amidotransferase class-I NYR91_00450 PF01063 Amino-transferase class IV NYR91_00455 PF00809 Pterin binding enzyme NYR91_00460 PF02152 Dihydroneopterin aldolase NYR91_00465 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) NYR91_00470 PF01381 Helix-turn-helix NYR91_00475 PF01207 Dihydrouridine synthase (Dus) NYR91_00480 PF00152 tRNA synthetases class II (D, K and N) NYR91_00480 PF01336 OB-fold nucleic acid binding domain NYR91_00560 PF05848 CtsR N-terminal HTH domain NYR91_00560 PF17727 CtsR C-terminal dimerization domain NYR91_00565 PF02151 UvrB/uvrC motif NYR91_00570 PF00217 ATP:guanido phosphotransferase, C-terminal catalytic domain NYR91_00575 PF00004 ATPase family associated with various cellular activities (AAA) NYR91_00575 PF07724 AAA domain (Cdc48 subfamily) NYR91_00575 PF17871 AAA lid domain NYR91_00575 PF02861 Clp amino terminal domain, pathogenicity island component NYR91_00575 PF10431 C-terminal, D2-small domain, of ClpB protein NYR91_00580 PF18073 Rubredoxin metal binding domain NYR91_00585 PF02457 DisA bacterial checkpoint controller nucleotide-binding NYR91_00585 PF10635 DisA bacterial checkpoint controller linker region NYR91_00595 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase NYR91_00600 PF02542 YgbB family NYR91_00605 PF00749 tRNA synthetases class I (E and Q), catalytic domain NYR91_00610 PF06426 Serine acetyltransferase, N-terminal NYR91_00610 PF00132 Bacterial transferase hexapeptide (six repeats) NYR91_00615 PF09190 DALR domain NYR91_00615 PF01406 tRNA synthetases class I (C) catalytic domain NYR91_00620 PF00636 Ribonuclease III domain NYR91_00625 PF00588 SpoU rRNA Methylase family NYR91_00625 PF08032 RNA 2'-O ribose methyltransferase substrate binding NYR91_00630 PF05991 YacP-like NYN domain NYR91_00635 PF04542 Sigma-70 region 2 NYR91_00635 PF08281 Sigma-70, region 4 NYR91_00640 PF00471 Ribosomal protein L33 NYR91_00645 PF00584 SecE/Sec61-gamma subunits of protein translocation complex NYR91_00650 PF00467 KOW motif NYR91_00650 PF02357 Transcription termination factor nusG NYR91_00655 PF00298 Ribosomal protein L11, RNA binding domain NYR91_00655 PF03946 Ribosomal protein L11, N-terminal domain NYR91_00660 PF00687 Ribosomal protein L1p/L10e family NYR91_00665 PF00466 Ribosomal protein L10 NYR91_00670 PF00542 Ribosomal protein L7/L12 C-terminal domain NYR91_00670 PF16320 Ribosomal protein L7/L12 dimerisation domain NYR91_00675 PF05175 Methyltransferase small domain NYR91_00680 PF04563 RNA polymerase beta subunit NYR91_00680 PF04561 RNA polymerase Rpb2, domain 2 NYR91_00680 PF04565 RNA polymerase Rpb2, domain 3 NYR91_00680 PF10385 RNA polymerase beta subunit external 1 domain NYR91_00680 PF00562 RNA polymerase Rpb2, domain 6 NYR91_00680 PF04560 RNA polymerase Rpb2, domain 7 NYR91_00685 PF04997 RNA polymerase Rpb1, domain 1 NYR91_00685 PF00623 RNA polymerase Rpb1, domain 2 NYR91_00685 PF04983 RNA polymerase Rpb1, domain 3 NYR91_00685 PF05000 RNA polymerase Rpb1, domain 4 NYR91_00685 PF04998 RNA polymerase Rpb1, domain 5 NYR91_00690 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family NYR91_00695 PF00164 Ribosomal protein S12/S23 NYR91_00700 PF00177 Ribosomal protein S7p/S5e NYR91_00705 PF00679 Elongation factor G C-terminus NYR91_00705 PF14492 Elongation Factor G, domain II NYR91_00705 PF03764 Elongation factor G, domain IV NYR91_00705 PF00009 Elongation factor Tu GTP binding domain NYR91_00705 PF03144 Elongation factor Tu domain 2 NYR91_00710 PF00009 Elongation factor Tu GTP binding domain NYR91_00710 PF03144 Elongation factor Tu domain 2 NYR91_00710 PF03143 Elongation factor Tu C-terminal domain NYR91_00715 PF12146 Serine aminopeptidase, S33 NYR91_00720 PF00338 Ribosomal protein S10p/S20e NYR91_00725 PF00297 Ribosomal protein L3 NYR91_00730 PF00573 Ribosomal protein L4/L1 family NYR91_00735 PF00276 Ribosomal protein L23 NYR91_00740 PF00181 Ribosomal Proteins L2, RNA binding domain NYR91_00740 PF03947 Ribosomal Proteins L2, C-terminal domain NYR91_00745 PF00203 Ribosomal protein S19 NYR91_00750 PF00237 Ribosomal protein L22p/L17e NYR91_00755 PF07650 KH domain NYR91_00755 PF00189 Ribosomal protein S3, C-terminal domain NYR91_00760 PF00252 Ribosomal protein L16p/L10e NYR91_00765 PF00831 Ribosomal L29 protein NYR91_00770 PF00366 Ribosomal protein S17 NYR91_00775 PF00238 Ribosomal protein L14p/L23e NYR91_00780 PF00467 KOW motif NYR91_00780 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 NYR91_00785 PF00673 ribosomal L5P family C-terminus NYR91_00785 PF00281 Ribosomal protein L5 NYR91_00790 PF00253 Ribosomal protein S14p/S29e NYR91_00795 PF00410 Ribosomal protein S8 NYR91_00800 PF00347 Ribosomal protein L6 NYR91_00805 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast NYR91_00810 PF00333 Ribosomal protein S5, N-terminal domain NYR91_00810 PF03719 Ribosomal protein S5, C-terminal domain NYR91_00815 PF00327 Ribosomal protein L30p/L7e NYR91_00820 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A NYR91_00825 PF00344 SecY translocase NYR91_00830 PF05191 Adenylate kinase, active site lid NYR91_00835 PF00557 Metallopeptidase family M24 NYR91_00845 PF01176 Translation initiation factor 1A / IF-1 NYR91_00850 PF00444 Ribosomal protein L36 NYR91_00855 PF00416 Ribosomal protein S13/S18 NYR91_00860 PF00411 Ribosomal protein S11 NYR91_00865 PF01000 RNA polymerase Rpb3/RpoA insert domain NYR91_00865 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain NYR91_00865 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain NYR91_00870 PF01196 Ribosomal protein L17 NYR91_00875 PF00005 ABC transporter NYR91_00880 PF00005 ABC transporter NYR91_00885 PF02361 Cobalt transport protein NYR91_00890 PF01416 tRNA pseudouridine synthase NYR91_00895 PF00572 Ribosomal protein L13 NYR91_00900 PF00380 Ribosomal protein S9/S16 NYR91_00905 PF08241 Methyltransferase domain NYR91_00910 PF10730 Protein of unknown function (DUF2521) NYR91_00915 PF01520 N-acetylmuramoyl-L-alanine amidase NYR91_00920 PF10609 NUBPL iron-transfer P-loop NTPase NYR91_00925 PF17898 Spore germination GerD central core domain NYR91_00930 PF14089 KinB-signalling pathway activation in sporulation NYR91_00935 PF01522 Polysaccharide deacetylase NYR91_01020 PF01740 STAS domain NYR91_01020 PF00916 Sulfate permease family NYR91_01025 PF01758 Sodium Bile acid symporter family NYR91_01030 PF00756 Putative esterase NYR91_01035 PF01032 FecCD transport family NYR91_01040 PF01032 FecCD transport family NYR91_01045 PF01497 Periplasmic binding protein NYR91_01050 PF01497 Periplasmic binding protein NYR91_01050 PF12833 Helix-turn-helix domain NYR91_01055 PF07075 Protein of unknown function (DUF1343) NYR91_01060 PF00933 Glycosyl hydrolase family 3 N terminal domain NYR91_01060 PF01915 Glycosyl hydrolase family 3 C-terminal domain NYR91_01065 PF00144 Beta-lactamase NYR91_01070 PF00367 phosphotransferase system, EIIB NYR91_01070 PF02378 Phosphotransferase system, EIIC NYR91_01075 PF01380 SIS domain NYR91_01075 PF01418 Helix-turn-helix domain, rpiR family NYR91_01080 PF01380 SIS domain NYR91_01090 PF04463 Protein of unknown function (DUF523) NYR91_01120 PF04542 Sigma-70 region 2 NYR91_01120 PF08281 Sigma-70, region 4 NYR91_01125 PF13490 Putative zinc-finger NYR91_01130 PF02457 DisA bacterial checkpoint controller nucleotide-binding NYR91_01135 PF07949 YbbR-like protein NYR91_01140 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain NYR91_01140 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III NYR91_01140 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I NYR91_01140 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II NYR91_01145 PF01380 SIS domain NYR91_01150 PF00361 Proton-conducting membrane transporter NYR91_01150 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus NYR91_01155 PF10070 Uncharacterized protein conserved in bacteria (DUF2309) NYR91_01170 PF10057 Uncharacterized conserved protein (DUF2294) NYR91_01180 PF07690 Major Facilitator Superfamily NYR91_01195 PF00069 Protein kinase domain NYR91_01205 PF16226 Domain of unknown function (DUF4885) NYR91_01210 PF00324 Amino acid permease NYR91_01215 PF17334 Minor curli fiber component A NYR91_01220 PF17340 Family of unknown function (DUF5370) NYR91_01225 PF00905 Penicillin binding protein transpeptidase domain NYR91_01230 PF00067 Cytochrome P450 NYR91_01240 PF13520 Amino acid permease NYR91_01245 PF00535 Glycosyl transferase family 2 NYR91_01245 PF18674 TarS beta-glycosyltransferase C-terminal domain 1 NYR91_01250 PF03009 Glycerophosphoryl diester phosphodiesterase family NYR91_01255 PF07690 Major Facilitator Superfamily NYR91_01260 PF10852 Protein of unknown function (DUF2651) NYR91_01265 PF00583 Acetyltransferase (GNAT) family NYR91_01265 PF01047 MarR family NYR91_01270 PF07690 Major Facilitator Superfamily NYR91_01280 PF08924 Domain of unknown function (DUF1906) NYR91_01280 PF01471 Putative peptidoglycan binding domain NYR91_01285 PF00892 EamA-like transporter family NYR91_01290 PF02311 AraC-like ligand binding domain NYR91_01290 PF12833 Helix-turn-helix domain NYR91_01295 PF02222 ATP-grasp domain NYR91_01300 PF00089 Trypsin NYR91_01305 PF10794 Protein of unknown function (DUF2606) NYR91_01310 PF12697 Alpha/beta hydrolase family NYR91_01315 PF01066 CDP-alcohol phosphatidyltransferase NYR91_01320 PF09335 SNARE associated Golgi protein NYR91_01325 PF02666 Phosphatidylserine decarboxylase NYR91_01335 PF05139 Erythromycin esterase NYR91_01340 PF00581 Rhodanese-like domain NYR91_01340 PF12368 Rhodanase C-terminal NYR91_01340 PF17773 UPF0176 acylphosphatase like domain NYR91_01345 PF00375 Sodium:dicarboxylate symporter family NYR91_01350 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 NYR91_01350 PF00367 phosphotransferase system, EIIB NYR91_01350 PF02378 Phosphotransferase system, EIIC NYR91_01355 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase NYR91_01360 PF00392 Bacterial regulatory proteins, gntR family NYR91_01360 PF07702 UTRA domain NYR91_01365 PF07853 Protein of unknown function (DUF1648) NYR91_01370 PF01063 Amino-transferase class IV NYR91_01375 PF00324 Amino acid permease NYR91_01380 PF02574 Homocysteine S-methyltransferase NYR91_01385 PF01235 Sodium:alanine symporter family NYR91_01390 PF04960 Glutaminase NYR91_01395 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NYR91_01400 PF00072 Response regulator receiver domain NYR91_01400 PF08664 YcbB domain NYR91_01405 PF00701 Dihydrodipicolinate synthetase family NYR91_01410 PF00171 Aldehyde dehydrogenase family NYR91_01415 PF07690 Major Facilitator Superfamily NYR91_01420 PF13378 Enolase C-terminal domain-like NYR91_01425 PF07729 FCD domain NYR91_01425 PF00392 Bacterial regulatory proteins, gntR family NYR91_01430 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus NYR91_01430 PF08666 SAF domain NYR91_01435 PF01636 Phosphotransferase enzyme family NYR91_01440 PF15777 Tryptophan RNA-binding attenuator protein inhibitory protein NYR91_01445 PF00892 EamA-like transporter family NYR91_01460 PF10710 Protein of unknown function (DUF2512) NYR91_01470 PF07486 Cell Wall Hydrolase NYR91_01475 PF10138 vWA found in TerF C terminus NYR91_01485 PF09423 PhoD-like phosphatase NYR91_01485 PF16655 PhoD-like phosphatase, N-terminal domain NYR91_01490 PF02416 mttA/Hcf106 family NYR91_01495 PF00902 Sec-independent protein translocase protein (TatC) NYR91_01500 PF01470 Pyroglutamyl peptidase NYR91_01505 PF00266 Aminotransferase class-V NYR91_01510 PF07690 Major Facilitator Superfamily NYR91_01515 PF00440 Bacterial regulatory proteins, tetR family NYR91_01520 PF00710 Asparaginase, N-terminal NYR91_01520 PF17763 Glutaminase/Asparaginase C-terminal domain NYR91_01525 PF01674 Lipase (class 2) NYR91_01530 PF06271 RDD family NYR91_01535 PF02810 SEC-C motif NYR91_01535 PF05225 helix-turn-helix, Psq domain NYR91_01540 PF14501 GHKL domain NYR91_01545 PF04397 LytTr DNA-binding domain NYR91_01545 PF00072 Response regulator receiver domain NYR91_01550 PF00005 ABC transporter NYR91_01555 PF12679 ABC-2 family transporter protein NYR91_01560 PF00248 Aldo/keto reductase family NYR91_01565 PF11611 Domain of unknown function (DUF4352) NYR91_01565 PF17118 Domain of unknown function (DUF5105) NYR91_01575 PF16244 Domain of unknown function (DUF4901) NYR91_01580 PF16244 Domain of unknown function (DUF4901) NYR91_01585 PF13539 D-alanyl-D-alanine carboxypeptidase NYR91_01590 PF18801 response regulator aspartate phosphatase H, N terminal NYR91_01600 PF00128 Alpha amylase, catalytic domain NYR91_01605 PF01297 Zinc-uptake complex component A periplasmic NYR91_01610 PF00005 ABC transporter NYR91_01615 PF00950 ABC 3 transport family NYR91_01620 PF00296 Luciferase-like monooxygenase NYR91_01625 PF02342 TerD domain NYR91_01630 PF02342 TerD domain NYR91_01635 PF02342 TerD domain NYR91_01640 PF03741 Integral membrane protein TerC family NYR91_01645 PF14266 Putative component of 'biosynthetic module' NYR91_01650 PF05816 Toxic anion resistance protein (TelA) NYR91_01655 PF07690 Major Facilitator Superfamily NYR91_01660 PF07690 Major Facilitator Superfamily NYR91_01670 PF00005 ABC transporter NYR91_01670 PF00571 CBS domain NYR91_01675 PF00528 Binding-protein-dependent transport system inner membrane component NYR91_01680 PF04069 Substrate binding domain of ABC-type glycine betaine transport system NYR91_01685 PF07687 Peptidase dimerisation domain NYR91_01685 PF01546 Peptidase family M20/M25/M40 NYR91_01690 PF03606 C4-dicarboxylate anaerobic carrier NYR91_01715 PF16738 Starch-binding module 26 NYR91_01715 PF00128 Alpha amylase, catalytic domain NYR91_01720 PF00056 lactate/malate dehydrogenase, NAD binding domain NYR91_01720 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain NYR91_01725 PF02652 L-lactate permease NYR91_01730 PF07690 Major Facilitator Superfamily NYR91_01735 PF01047 MarR family NYR91_01740 PF01810 LysE type translocator NYR91_01745 PF08892 YqcI/YcgG family NYR91_01750 PF00324 Amino acid permease NYR91_01755 PF09347 Domain of unknown function (DUF1989) NYR91_01760 PF02540 NAD synthase NYR91_01770 PF01202 Shikimate kinase NYR91_01775 PF08241 Methyltransferase domain NYR91_01780 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NYR91_01780 PF03466 LysR substrate binding domain NYR91_01785 PF05448 Acetyl xylan esterase (AXE1) NYR91_01790 PF10127 RNA repair pathway DNA polymerase beta family NYR91_01795 PF01619 Proline dehydrogenase NYR91_01800 PF00171 Aldehyde dehydrogenase family NYR91_01805 PF00474 Sodium:solute symporter family NYR91_01810 PF17853 GGDEF-like domain NYR91_01810 PF13556 PucR C-terminal helix-turn-helix domain NYR91_01815 PF09323 Domain of unknown function (DUF1980) NYR91_01820 PF03773 Predicted permease NYR91_01825 PF00561 alpha/beta hydrolase fold NYR91_01830 PF07992 Pyridine nucleotide-disulphide oxidoreductase NYR91_01835 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases NYR91_01840 PF00355 Rieske [2Fe-2S] domain NYR91_01845 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain NYR91_01845 PF01077 Nitrite and sulphite reductase 4Fe-4S domain NYR91_01845 PF18267 Rubredoxin NAD+ reductase C-terminal domain NYR91_01845 PF07992 Pyridine nucleotide-disulphide oxidoreductase NYR91_01845 PF04324 BFD-like [2Fe-2S] binding domain NYR91_01850 PF04879 Molybdopterin oxidoreductase Fe4S4 domain NYR91_01850 PF01568 Molydopterin dinucleotide binding domain NYR91_01850 PF00384 Molybdopterin oxidoreductase NYR91_01855 PF04324 BFD-like [2Fe-2S] binding domain NYR91_01855 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain NYR91_01855 PF18267 Rubredoxin NAD+ reductase C-terminal domain NYR91_01855 PF07992 Pyridine nucleotide-disulphide oxidoreductase NYR91_01860 PF07690 Major Facilitator Superfamily NYR91_01865 PF02649 Type I GTP cyclohydrolase folE2 NYR91_01870 PF03734 L,D-transpeptidase catalytic domain NYR91_01880 PF02492 CobW/HypB/UreG, nucleotide-binding domain NYR91_01880 PF07683 Cobalamin synthesis protein cobW C-terminal domain NYR91_01885 PF00528 Binding-protein-dependent transport system inner membrane component NYR91_01890 PF00497 Bacterial extracellular solute-binding proteins, family 3 NYR91_01900 PF06271 RDD family NYR91_01905 PF10925 Protein of unknown function (DUF2680) NYR91_01910 PF01047 MarR family NYR91_01925 PF00232 Glycosyl hydrolase family 1 NYR91_01930 PF11033 Competence protein J (ComJ) NYR91_01935 PF14040 Deoxyribonuclease NucA/NucB NYR91_01940 PF17202 Single cache domain 3 NYR91_01940 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NYR91_01940 PF00672 HAMP domain NYR91_01945 PF01380 SIS domain NYR91_01950 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family NYR91_01955 PF01638 HxlR-like helix-turn-helix NYR91_01960 PF00550 Phosphopantetheine attachment site NYR91_01960 PF00501 AMP-binding enzyme NYR91_01960 PF13193 AMP-binding enzyme C-terminal domain NYR91_01960 PF00668 Condensation domain NYR91_01970 PF17584 Bacillus competence protein S NYR91_01980 PF00668 Condensation domain NYR91_01980 PF13193 AMP-binding enzyme C-terminal domain NYR91_01980 PF00550 Phosphopantetheine attachment site NYR91_01980 PF00501 AMP-binding enzyme NYR91_01985 PF00550 Phosphopantetheine attachment site NYR91_01985 PF00975 Thioesterase domain NYR91_01985 PF00668 Condensation domain NYR91_01985 PF13193 AMP-binding enzyme C-terminal domain NYR91_01985 PF00501 AMP-binding enzyme NYR91_01990 PF00975 Thioesterase domain NYR91_01995 PF07690 Major Facilitator Superfamily NYR91_02000 PF14317 YcxB-like protein NYR91_02005 PF00892 EamA-like transporter family NYR91_02010 PF00155 Aminotransferase class I and II NYR91_02010 PF00392 Bacterial regulatory proteins, gntR family NYR91_02015 PF01648 4'-phosphopantetheinyl transferase superfamily NYR91_02025 PF00005 ABC transporter NYR91_02030 PF00528 Binding-protein-dependent transport system inner membrane component NYR91_02035 PF00497 Bacterial extracellular solute-binding proteins, family 3 NYR91_02040 PF03466 LysR substrate binding domain NYR91_02040 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NYR91_02045 PF02441 Flavoprotein NYR91_02050 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase NYR91_02065 PF00561 alpha/beta hydrolase fold NYR91_02070 PF00854 POT family NYR91_02075 PF13229 Right handed beta helix region NYR91_02075 PF12708 Pectate lyase superfamily protein NYR91_02085 PF03323 Bacillus/Clostridium GerA spore germination protein NYR91_02090 PF05504 Spore germination B3/ GerAC like, C-terminal NYR91_02095 PF03845 Spore germination protein NYR91_02100 PF00005 ABC transporter NYR91_02105 PF02687 FtsX-like permease family NYR91_02105 PF12704 MacB-like periplasmic core domain NYR91_02110 PF00072 Response regulator receiver domain NYR91_02110 PF00486 Transcriptional regulatory protein, C terminal NYR91_02115 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NYR91_02115 PF00672 HAMP domain NYR91_02115 PF00512 His Kinase A (phospho-acceptor) domain NYR91_02120 PF18801 response regulator aspartate phosphatase H, N terminal NYR91_02125 PF11131 Rap-phr extracellular signalling NYR91_02130 PF09680 Family of unknown function NYR91_02135 PF09680 Family of unknown function NYR91_02140 PF00696 Amino acid kinase family NYR91_02140 PF13840 ACT domain NYR91_02145 PF01032 FecCD transport family NYR91_02150 PF01032 FecCD transport family NYR91_02155 PF00005 ABC transporter NYR91_02160 PF01497 Periplasmic binding protein NYR91_02170 PF07690 Major Facilitator Superfamily NYR91_02175 PF00440 Bacterial regulatory proteins, tetR family NYR91_02180 PF00881 Nitroreductase family NYR91_02185 PF03992 Antibiotic biosynthesis monooxygenase NYR91_02190 PF01022 Bacterial regulatory protein, arsR family NYR91_02195 PF00392 Bacterial regulatory proteins, gntR family NYR91_02195 PF00155 Aminotransferase class I and II NYR91_02200 PF00202 Aminotransferase class-III NYR91_02205 PF00171 Aldehyde dehydrogenase family NYR91_02210 PF06800 Sugar transport protein NYR91_02220 PF07987 Domain of unkown function (DUF1775) NYR91_02225 PF04234 CopC domain NYR91_02225 PF13115 YtkA-like NYR91_02225 PF05425 Copper resistance protein D NYR91_02230 PF08220 DeoR-like helix-turn-helix domain NYR91_02230 PF05573 NosL NYR91_02245 PF02378 Phosphotransferase system, EIIC NYR91_02245 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit NYR91_02250 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 NYR91_02255 PF01232 Mannitol dehydrogenase Rossmann domain NYR91_02255 PF08125 Mannitol dehydrogenase C-terminal domain NYR91_02260 PF00180 Isocitrate/isopropylmalate dehydrogenase NYR91_02265 PF10502 Signal peptidase, peptidase S26 NYR91_02270 PF01738 Dienelactone hydrolase family NYR91_02290 PF03746 LamB/YcsF family NYR91_02295 PF01566 Natural resistance-associated macrophage protein NYR91_02300 PF07286 Protein of unknown function (DUF1445) NYR91_02305 PF02682 Carboxyltransferase domain, subdomain C and D NYR91_02310 PF02626 Carboxyltransferase domain, subdomain A and B NYR91_02315 PF01614 Bacterial transcriptional regulator NYR91_02315 PF09339 IclR helix-turn-helix domain NYR91_02320 PF13472 GDSL-like Lipase/Acylhydrolase family NYR91_02325 PF13129 Protein of unknown function (DUF3953) NYR91_02330 PF03992 Antibiotic biosynthesis monooxygenase NYR91_02335 PF05223 NTF2-like N-terminal transpeptidase domain NYR91_02335 PF03717 Penicillin-binding Protein dimerisation domain NYR91_02335 PF00905 Penicillin binding protein transpeptidase domain NYR91_02340 PF00248 Aldo/keto reductase family NYR91_02345 PF05043 Mga helix-turn-helix domain NYR91_02345 PF00874 PRD domain NYR91_02345 PF08279 HTH domain NYR91_02345 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 NYR91_02345 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit NYR91_02350 PF13193 AMP-binding enzyme C-terminal domain NYR91_02350 PF00501 AMP-binding enzyme NYR91_02355 PF13649 Methyltransferase domain NYR91_02370 PF13302 Acetyltransferase (GNAT) domain NYR91_02375 PF16242 Pyridoxamine 5'-phosphate oxidase like NYR91_02380 PF10997 Alternate to MurJ NYR91_02385 PF12823 Domain of unknown function (DUF3817) NYR91_02390 PF01037 Lrp/AsnC ligand binding domain NYR91_02395 PF01751 Toprim domain NYR91_02395 PF01131 DNA topoisomerase NYR91_02405 PF00990 Diguanylate cyclase, GGDEF domain NYR91_02410 PF10096 Uncharacterized protein conserved in bacteria (DUF2334) NYR91_02420 PF03170 Bacterial cellulose synthase subunit NYR91_02425 PF13520 Amino acid permease NYR91_02435 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain NYR91_02435 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain NYR91_02435 PF00205 Thiamine pyrophosphate enzyme, central domain NYR91_02450 PF01566 Natural resistance-associated macrophage protein NYR91_02455 PF04226 Transglycosylase associated protein NYR91_02460 PF09954 Uncharacterized protein conserved in bacteria (DUF2188) NYR91_02465 PF12787 EcsC protein family NYR91_02470 PF00477 Small hydrophilic plant seed protein NYR91_02470 PF10685 Stress-induced bacterial acidophilic repeat motif NYR91_02475 PF07883 Cupin domain NYR91_02480 PF16291 Domain of unknown function (DUF4937 NYR91_02485 PF05067 Manganese containing catalase NYR91_02490 PF03480 Bacterial extracellular solute-binding protein, family 7 NYR91_02495 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NYR91_02495 PF17203 Single cache domain 3 NYR91_02495 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain NYR91_02500 PF00072 Response regulator receiver domain NYR91_02500 PF08279 HTH domain NYR91_02505 PF00375 Sodium:dicarboxylate symporter family NYR91_02510 PF01594 AI-2E family transporter NYR91_02515 PF00005 ABC transporter NYR91_02530 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NYR91_02530 PF02770 Acyl-CoA dehydrogenase, middle domain NYR91_02530 PF08028 Acyl-CoA dehydrogenase, C-terminal domain NYR91_02535 PF13040 Fur-regulated basic protein B NYR91_02545 PF16916 Dimerisation domain of Zinc Transporter NYR91_02545 PF01545 Cation efflux family NYR91_02550 PF00085 Thioredoxin NYR91_02555 PF07478 D-ala D-ala ligase C-terminus NYR91_02555 PF01820 D-ala D-ala ligase N-terminus NYR91_02560 PF01225 Mur ligase family, catalytic domain NYR91_02560 PF02875 Mur ligase family, glutamate ligase domain NYR91_02560 PF08245 Mur ligase middle domain NYR91_02565 PF00270 DEAD/DEAH box helicase NYR91_02565 PF00271 Helicase conserved C-terminal domain NYR91_02570 PF03703 Bacterial PH domain NYR91_02575 PF03703 Bacterial PH domain NYR91_02580 PF01694 Rhomboid family NYR91_02585 PF01648 4'-phosphopantetheinyl transferase superfamily NYR91_02595 PF01168 Alanine racemase, N-terminal domain NYR91_02595 PF00842 Alanine racemase, C-terminal domain NYR91_02600 PF01402 Ribbon-helix-helix protein, copG family NYR91_02605 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system NYR91_02610 PF01740 STAS domain NYR91_02610 PF08678 Rsbr N terminal NYR91_02615 PF01740 STAS domain NYR91_02620 PF13581 Histidine kinase-like ATPase domain NYR91_02625 PF07228 Stage II sporulation protein E (SpoIIE) NYR91_02625 PF08673 Phosphoserine phosphatase RsbU, N-terminal domain NYR91_02630 PF01740 STAS domain NYR91_02635 PF13581 Histidine kinase-like ATPase domain NYR91_02640 PF04542 Sigma-70 region 2 NYR91_02640 PF04539 Sigma-70 region 3 NYR91_02640 PF04545 Sigma-70, region 4 NYR91_02645 PF07228 Stage II sporulation protein E (SpoIIE) NYR91_02660 PF01878 EVE domain NYR91_02665 PF01047 MarR family NYR91_02670 PF17674 HHH domain NYR91_02670 PF16921 Tex protein YqgF-like domain NYR91_02670 PF09371 Tex-like protein N-terminal domain NYR91_02670 PF00575 S1 RNA binding domain NYR91_02680 PF10263 SprT-like family NYR91_02680 PF17283 SprT-like zinc ribbon domain NYR91_02725 PF01037 Lrp/AsnC ligand binding domain NYR91_02730 PF12706 Beta-lactamase superfamily domain NYR91_02735 PF07690 Major Facilitator Superfamily NYR91_02735 PF00083 Sugar (and other) transporter NYR91_02750 PF14411 A nuclease of the HNH/ENDO VII superfamily with conserved LHH NYR91_02750 PF04740 LXG domain of WXG superfamily NYR91_02760 PF01381 Helix-turn-helix NYR91_02770 PF00487 Fatty acid desaturase NYR91_02775 PF00313 'Cold-shock' DNA-binding domain NYR91_02780 PF02559 CarD-like/TRCF domain NYR91_02790 PF07690 Major Facilitator Superfamily NYR91_02795 PF12833 Helix-turn-helix domain NYR91_02795 PF02311 AraC-like ligand binding domain NYR91_02800 PF00892 EamA-like transporter family NYR91_02805 PF12833 Helix-turn-helix domain NYR91_02805 PF06445 GyrI-like small molecule binding domain NYR91_02815 PF07690 Major Facilitator Superfamily NYR91_02825 PF08818 Domain of unknown function (DU1801) NYR91_02845 PF03466 LysR substrate binding domain NYR91_02845 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NYR91_02850 PF00206 Lyase NYR91_02850 PF10415 Fumarase C C-terminus NYR91_02855 PF12706 Beta-lactamase superfamily domain NYR91_02860 PF01037 Lrp/AsnC ligand binding domain NYR91_02865 PF00892 EamA-like transporter family NYR91_02870 PF00392 Bacterial regulatory proteins, gntR family NYR91_02870 PF00155 Aminotransferase class I and II NYR91_02875 PF01575 MaoC like domain NYR91_02880 PF06821 Serine hydrolase NYR91_02885 PF01638 HxlR-like helix-turn-helix NYR91_02890 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 NYR91_02890 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) NYR91_02895 PF01022 Bacterial regulatory protein, arsR family NYR91_02900 PF02040 Arsenical pump membrane protein NYR91_02905 PF01451 Low molecular weight phosphotyrosine protein phosphatase NYR91_02910 PF12746 GNAT acetyltransferase NYR91_02915 PF03816 Cell envelope-related transcriptional attenuator domain NYR91_02920 PF01522 Polysaccharide deacetylase NYR91_02930 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NYR91_02930 PF00512 His Kinase A (phospho-acceptor) domain NYR91_02935 PF00072 Response regulator receiver domain NYR91_02935 PF00486 Transcriptional regulatory protein, C terminal NYR91_02940 PF00892 EamA-like transporter family NYR91_02945 PF00155 Aminotransferase class I and II NYR91_02945 PF00392 Bacterial regulatory proteins, gntR family NYR91_02950 PF01613 Flavin reductase like domain NYR91_02960 PF02627 Carboxymuconolactone decarboxylase family NYR91_02975 PF07730 Histidine kinase NYR91_02975 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NYR91_02980 PF00072 Response regulator receiver domain NYR91_02980 PF00196 Bacterial regulatory proteins, luxR family NYR91_02985 PF03176 MMPL family NYR91_02990 PF04474 Protein of unknown function (DUF554) NYR91_02995 PF06445 GyrI-like small molecule binding domain NYR91_02995 PF13411 MerR HTH family regulatory protein NYR91_03000 PF01545 Cation efflux family NYR91_03000 PF16916 Dimerisation domain of Zinc Transporter NYR91_03005 PF00881 Nitroreductase family NYR91_03010 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily NYR91_03015 PF07681 DoxX NYR91_03020 PF00085 Thioredoxin NYR91_03025 PF10676 Spore germination protein gerPA/gerPF NYR91_03035 PF10676 Spore germination protein gerPA/gerPF NYR91_03045 PF04239 Protein of unknown function (DUF421) NYR91_03050 PF00011 Hsp20/alpha crystallin family NYR91_03055 PF10676 Spore germination protein gerPA/gerPF NYR91_03060 PF10676 Spore germination protein gerPA/gerPF NYR91_03065 PF00440 Bacterial regulatory proteins, tetR family NYR91_03070 PF13564 DoxX-like family NYR91_03075 PF00583 Acetyltransferase (GNAT) family NYR91_03085 PF02894 Oxidoreductase family, C-terminal alpha/beta domain NYR91_03085 PF01408 Oxidoreductase family, NAD-binding Rossmann fold NYR91_03090 PF00356 Bacterial regulatory proteins, lacI family NYR91_03095 PF00083 Sugar (and other) transporter NYR91_03100 PF01261 Xylose isomerase-like TIM barrel NYR91_03105 PF00005 ABC transporter NYR91_03105 PF12848 ABC transporter NYR91_03110 PF00324 Amino acid permease NYR91_03115 PF05163 DinB family NYR91_03120 PF01047 MarR family NYR91_03125 PF03176 MMPL family NYR91_03130 PF00881 Nitroreductase family NYR91_03135 PF01047 MarR family NYR91_03140 PF07690 Major Facilitator Superfamily NYR91_03145 PF01925 Sulfite exporter TauE/SafE NYR91_03150 PF00392 Bacterial regulatory proteins, gntR family NYR91_03150 PF07729 FCD domain NYR91_03155 PF00704 Glycosyl hydrolases family 18 NYR91_03155 PF01476 LysM domain NYR91_03160 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase NYR91_03165 PF08139 Prokaryotic membrane lipoprotein lipid attachment site NYR91_03165 PF11611 Domain of unknown function (DUF4352) NYR91_03170 PF00245 Alkaline phosphatase NYR91_03175 PF08818 Domain of unknown function (DU1801) NYR91_03180 PF16302 Domain of unknown function (DUF4944) NYR91_03185 PF00583 Acetyltransferase (GNAT) family NYR91_03190 PF01966 HD domain NYR91_03195 PF07563 Protein of unknown function (DUF1541) NYR91_03200 PF07690 Major Facilitator Superfamily NYR91_03205 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit NYR91_03210 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit NYR91_03215 PF02378 Phosphotransferase system, EIIC NYR91_03220 PF00232 Glycosyl hydrolase family 1 NYR91_03225 PF00392 Bacterial regulatory proteins, gntR family NYR91_03225 PF07702 UTRA domain NYR91_03230 PF00480 ROK family NYR91_03235 PF01238 Phosphomannose isomerase type I NYR91_03240 PF02156 Glycosyl hydrolase family 26 NYR91_03285 PF00586 AIR synthase related protein, N-terminal domain NYR91_03285 PF02769 AIR synthase related protein, C-terminal domain NYR91_03290 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE NYR91_03295 PF00814 Glycoprotease family NYR91_03300 PF00583 Acetyltransferase (GNAT) family NYR91_03305 PF00814 Glycoprotease family NYR91_03310 PF12848 ABC transporter NYR91_03310 PF16326 ABC transporter C-terminal domain NYR91_03310 PF00005 ABC transporter NYR91_03315 PF01967 MoaC family NYR91_03320 PF06971 Putative DNA-binding protein N-terminus NYR91_03320 PF02629 CoA binding domain NYR91_03325 PF02416 mttA/Hcf106 family NYR91_03330 PF00902 Sec-independent protein translocase protein (TatC) NYR91_03335 PF14146 Domain of unknown function (DUF4305) NYR91_03340 PF02517 CPBP intramembrane metalloprotease NYR91_03345 PF00166 Chaperonin 10 Kd subunit NYR91_03350 PF00118 TCP-1/cpn60 chaperonin family NYR91_03360 PF13176 Tetratricopeptide repeat NYR91_03360 PF00931 NB-ARC domain NYR91_03365 PF00107 Zinc-binding dehydrogenase NYR91_03365 PF08240 Alcohol dehydrogenase GroES-like domain NYR91_03375 PF00294 pfkB family carbohydrate kinase NYR91_03380 PF07885 Ion channel NYR91_03385 PF00083 Sugar (and other) transporter NYR91_03390 PF00107 Zinc-binding dehydrogenase NYR91_03390 PF08240 Alcohol dehydrogenase GroES-like domain NYR91_03395 PF03330 Lytic transglycolase NYR91_03400 PF07676 WD40-like Beta Propeller Repeat NYR91_03410 PF14169 Cold-inducible protein YdjO NYR91_03415 PF12697 Alpha/beta hydrolase family NYR91_03420 PF13170 Protein of unknown function (DUF4003) NYR91_03425 PF00394 Multicopper oxidase NYR91_03425 PF07732 Multicopper oxidase NYR91_03425 PF07731 Multicopper oxidase NYR91_03430 PF00324 Amino acid permease NYR91_03440 PF16916 Dimerisation domain of Zinc Transporter NYR91_03440 PF01545 Cation efflux family NYR91_03445 PF17863 AAA lid domain NYR91_03445 PF07726 ATPase family associated with various cellular activities (AAA) NYR91_03450 PF01882 Protein of unknown function DUF58 NYR91_03455 PF01841 Transglutaminase-like superfamily NYR91_03455 PF13559 Domain of unknown function (DUF4129) NYR91_03455 PF11992 Domain of unknown function (DUF3488) NYR91_03460 PF00117 Glutamine amidotransferase class-I NYR91_03460 PF00958 GMP synthase C terminal domain NYR91_03460 PF02540 NAD synthase NYR91_03465 PF04542 Sigma-70 region 2 NYR91_03465 PF04545 Sigma-70, region 4 NYR91_03475 PF00860 Permease family NYR91_03485 PF13076 Fur-regulated basic protein A NYR91_03490 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) NYR91_03495 PF14044 NETI protein NYR91_03500 PF00731 AIR carboxylase NYR91_03505 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain NYR91_03505 PF02222 ATP-grasp domain NYR91_03510 PF00206 Lyase NYR91_03510 PF10397 Adenylosuccinate lyase C-terminus NYR91_03515 PF01259 SAICAR synthetase NYR91_03520 PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase NYR91_03530 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain NYR91_03530 PF02769 AIR synthase related protein, C-terminal domain NYR91_03530 PF00586 AIR synthase related protein, N-terminal domain NYR91_03535 PF00156 Phosphoribosyl transferase domain NYR91_03540 PF02769 AIR synthase related protein, C-terminal domain NYR91_03540 PF00586 AIR synthase related protein, N-terminal domain NYR91_03545 PF00551 Formyl transferase NYR91_03550 PF01808 AICARFT/IMPCHase bienzyme NYR91_03550 PF02142 MGS-like domain NYR91_03555 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain NYR91_03555 PF02843 Phosphoribosylglycinamide synthetase, C domain NYR91_03555 PF02844 Phosphoribosylglycinamide synthetase, N domain NYR91_03560 PF01037 Lrp/AsnC ligand binding domain NYR91_03565 PF13520 Amino acid permease NYR91_03570 PF11127 Protein of unknown function (DUF2892) NYR91_03575 PF01979 Amidohydrolase family NYR91_03575 PF13382 Adenine deaminase C-terminal domain NYR91_03580 PF17479 Protein of unknown function (DUF3048) C-terminal domain NYR91_03580 PF11258 Protein of unknown function (DUF3048) N-terminal domain NYR91_03585 PF01371 Trp repressor protein NYR91_03590 PF01645 Conserved region in glutamate synthase NYR91_03595 PF01884 PcrB family NYR91_03600 PF00580 UvrD/REP helicase N-terminal domain NYR91_03600 PF13361 UvrD-like helicase C-terminal domain NYR91_03605 PF00533 BRCA1 C Terminus (BRCT) domain NYR91_03605 PF03120 NAD-dependent DNA ligase OB-fold domain NYR91_03605 PF12826 Helix-hairpin-helix motif NYR91_03605 PF01653 NAD-dependent DNA ligase adenylation domain NYR91_03605 PF03119 NAD-dependent DNA ligase C4 zinc finger domain NYR91_03610 PF07537 CamS sex pheromone cAM373 precursor NYR91_03615 PF01636 Phosphotransferase enzyme family NYR91_03620 PF02308 MgtC family NYR91_03625 PF00474 Sodium:solute symporter family NYR91_03630 PF02686 Glu-tRNAGln amidotransferase C subunit NYR91_03635 PF01425 Amidase NYR91_03640 PF02934 GatB/GatE catalytic domain NYR91_03640 PF02637 GatB domain NYR91_03650 PF00873 AcrB/AcrD/AcrF family NYR91_03655 PF00781 Diacylglycerol kinase catalytic domain NYR91_03660 PF01938 TRAM domain NYR91_03660 PF05958 tRNA (Uracil-5-)-methyltransferase NYR91_03665 PF02384 N-6 DNA Methylase NYR91_03675 PF11867 Domain of unknown function (DUF3387) NYR91_03675 PF18766 SWI2/SNF2 ATPase NYR91_03675 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) NYR91_03690 PF04634 Protein of unknown function, DUF600 NYR91_03695 PF04740 LXG domain of WXG superfamily NYR91_03710 PF13176 Tetratricopeptide repeat NYR91_03710 PF18801 response regulator aspartate phosphatase H, N terminal NYR91_03720 PF01709 Transcriptional regulator NYR91_03730 PF00440 Bacterial regulatory proteins, tetR family NYR91_03735 PF12680 SnoaL-like domain NYR91_03745 PF11007 Spore coat associated protein JA (CotJA) NYR91_03750 PF12652 CotJB protein NYR91_03755 PF05067 Manganese containing catalase NYR91_03760 PF00583 Acetyltransferase (GNAT) family NYR91_03765 PF14150 YesK-like protein NYR91_03770 PF04854 Protein of unknown function, DUF624 NYR91_03775 PF00672 HAMP domain NYR91_03775 PF02743 Cache domain NYR91_03775 PF06580 Histidine kinase NYR91_03775 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NYR91_03780 PF12833 Helix-turn-helix domain NYR91_03780 PF00072 Response regulator receiver domain NYR91_03785 PF13416 Bacterial extracellular solute-binding protein NYR91_03790 PF00528 Binding-protein-dependent transport system inner membrane component NYR91_03795 PF00528 Binding-protein-dependent transport system inner membrane component NYR91_03800 PF07470 Glycosyl Hydrolase Family 88 NYR91_03805 PF12833 Helix-turn-helix domain NYR91_03810 PF13472 GDSL-like Lipase/Acylhydrolase family NYR91_03815 PF09224 Domain of unknown function (DUF1961) NYR91_03820 PF04854 Protein of unknown function, DUF624 NYR91_03825 PF18370 Rhamnogalacturonan I lyases beta-sheet domain NYR91_03830 PF18370 Rhamnogalacturonan I lyases beta-sheet domain NYR91_03830 PF01839 FG-GAP repeat NYR91_03835 PF00657 GDSL-like Lipase/Acylhydrolase NYR91_03840 PF08533 Beta-galactosidase C-terminal domain NYR91_03840 PF08532 Beta-galactosidase trimerisation domain NYR91_03840 PF02449 Beta-galactosidase NYR91_03850 PF01547 Bacterial extracellular solute-binding protein NYR91_03855 PF00528 Binding-protein-dependent transport system inner membrane component NYR91_03860 PF00528 Binding-protein-dependent transport system inner membrane component NYR91_03865 PF02056 Family 4 glycosyl hydrolase NYR91_03865 PF11975 Family 4 glycosyl hydrolase C-terminal domain NYR91_03870 PF04239 Protein of unknown function (DUF421) NYR91_03875 PF03992 Antibiotic biosynthesis monooxygenase NYR91_03880 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily NYR91_03890 PF01740 STAS domain NYR91_03895 PF10055 Uncharacterized small protein (DUF2292) NYR91_03900 PF01027 Inhibitor of apoptosis-promoting Bax1 NYR91_03910 PF01047 MarR family NYR91_03915 PF01494 FAD binding domain NYR91_03920 PF13037 Domain of unknown function (DUF3898) NYR91_03920 PF13039 Protein of unknown function (DUF3900) NYR91_03925 PF00667 FAD binding domain NYR91_03925 PF00175 Oxidoreductase NAD-binding domain NYR91_03925 PF00067 Cytochrome P450 NYR91_03925 PF00258 Flavodoxin NYR91_03930 PF00884 Sulfatase NYR91_03935 PF00483 Nucleotidyl transferase NYR91_03940 PF16363 GDP-mannose 4,6 dehydratase NYR91_03945 PF03407 Nucleotide-diphospho-sugar transferase NYR91_03950 PF00535 Glycosyl transferase family 2 NYR91_03955 PF03407 Nucleotide-diphospho-sugar transferase NYR91_03960 PF07690 Major Facilitator Superfamily NYR91_03965 PF13419 Haloacid dehalogenase-like hydrolase NYR91_03970 PF13520 Amino acid permease NYR91_03975 PF00171 Aldehyde dehydrogenase family NYR91_03980 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NYR91_03985 PF16326 ABC transporter C-terminal domain NYR91_03985 PF12848 ABC transporter NYR91_03985 PF00005 ABC transporter NYR91_03990 PF10787 Uncharacterised protein from bacillus cereus group NYR91_03995 PF13411 MerR HTH family regulatory protein NYR91_04000 PF07690 Major Facilitator Superfamily NYR91_04010 PF00005 ABC transporter NYR91_04010 PF12848 ABC transporter NYR91_04015 PF00270 DEAD/DEAH box helicase NYR91_04015 PF00271 Helicase conserved C-terminal domain NYR91_04020 PF00583 Acetyltransferase (GNAT) family NYR91_04025 PF00107 Zinc-binding dehydrogenase NYR91_04025 PF16884 N-terminal domain of oxidoreductase NYR91_04030 PF00005 ABC transporter NYR91_04035 PF01032 FecCD transport family NYR91_04040 PF01032 FecCD transport family NYR91_04045 PF01497 Periplasmic binding protein NYR91_04050 PF11486 Protein of unknown function (DUF3212) NYR91_04055 PF11181 Heat induced stress protein YflT NYR91_04060 PF00544 Pectate lyase NYR91_04065 PF00939 Sodium:sulfate symporter transmembrane region NYR91_04085 PF00535 Glycosyl transferase family 2 NYR91_04085 PF13181 Tetratricopeptide repeat NYR91_04090 PF00535 Glycosyl transferase family 2 NYR91_04095 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain NYR91_04095 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NYR91_04100 PF12431 Transcriptional regulator NYR91_04100 PF08279 HTH domain NYR91_04100 PF00072 Response regulator receiver domain NYR91_04105 PF03401 Tripartite tricarboxylate transporter family receptor NYR91_04115 PF03600 Citrate transporter NYR91_04120 PF00753 Metallo-beta-lactamase superfamily NYR91_04125 PF02898 Nitric oxide synthase, oxygenase domain NYR91_04130 PF00708 Acylphosphatase NYR91_04135 PF03473 MOSC domain NYR91_04135 PF03475 3-alpha domain NYR91_04140 PF11121 Protein of unknown function (DUF2639) NYR91_04150 PF11588 Protein of unknown function (DUF3243) NYR91_04155 PF00557 Metallopeptidase family M24 NYR91_04160 PF00367 phosphotransferase system, EIIB NYR91_04160 PF02378 Phosphotransferase system, EIIC NYR91_04165 PF00884 Sulfatase NYR91_04175 PF09350 Domain of unknown function (DUF1992) NYR91_04180 PF01235 Sodium:alanine symporter family NYR91_04185 PF03845 Spore germination protein NYR91_04195 PF05504 Spore germination B3/ GerAC like, C-terminal NYR91_04200 PF03323 Bacillus/Clostridium GerA spore germination protein NYR91_04205 PF00367 phosphotransferase system, EIIB NYR91_04205 PF02378 Phosphotransferase system, EIIC NYR91_04210 PF00128 Alpha amylase, catalytic domain NYR91_04210 PF16657 Maltogenic Amylase, C-terminal domain NYR91_04215 PF00392 Bacterial regulatory proteins, gntR family NYR91_04215 PF07702 UTRA domain NYR91_04220 PF00881 Nitroreductase family NYR91_04225 PF00149 Calcineurin-like phosphoesterase NYR91_04225 PF02872 5'-nucleotidase, C-terminal domain NYR91_04230 PF01965 DJ-1/PfpI family NYR91_04235 PF07690 Major Facilitator Superfamily NYR91_04240 PF06569 Protein of unknown function (DUF1128) NYR91_04245 PF01451 Low molecular weight phosphotyrosine protein phosphatase NYR91_04255 PF03631 Virulence factor BrkB NYR91_04260 PF07690 Major Facilitator Superfamily NYR91_04265 PF01699 Sodium/calcium exchanger protein NYR91_04270 PF14167 YfkD-like protein NYR91_04275 PF00924 Mechanosensitive ion channel NYR91_04280 PF04055 Radical SAM superfamily NYR91_04280 PF08756 YfkB-like domain NYR91_04295 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase NYR91_04295 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase NYR91_04305 PF00730 HhH-GPD superfamily base excision DNA repair protein NYR91_04310 PF01938 TRAM domain NYR91_04310 PF05958 tRNA (Uracil-5-)-methyltransferase NYR91_04315 PF14118 YfzA-like protein NYR91_04335 PF00676 Dehydrogenase E1 component NYR91_04340 PF02779 Transketolase, pyrimidine binding domain NYR91_04340 PF02780 Transketolase, C-terminal domain NYR91_04345 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) NYR91_04345 PF00364 Biotin-requiring enzyme NYR91_04345 PF02817 e3 binding domain NYR91_04350 PF07992 Pyridine nucleotide-disulphide oxidoreductase NYR91_04350 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain NYR91_04355 PF02954 Bacterial regulatory protein, Fis family NYR91_04355 PF00158 Sigma-54 interaction domain NYR91_04355 PF01590 GAF domain NYR91_04360 PF08141 Small acid-soluble spore protein H family NYR91_04365 PF02694 Uncharacterised BCR, YnfA/UPF0060 family NYR91_04370 PF17353 Family of unknown function (DUF5381) NYR91_04375 PF17353 Family of unknown function (DUF5381) NYR91_04390 PF06013 Proteins of 100 residues with WXG NYR91_04405 PF04740 LXG domain of WXG superfamily NYR91_04405 PF14449 Pre-toxin TG NYR91_04420 PF02056 Family 4 glycosyl hydrolase NYR91_04420 PF11975 Family 4 glycosyl hydrolase C-terminal domain NYR91_04425 PF01380 SIS domain NYR91_04425 PF01418 Helix-turn-helix domain, rpiR family NYR91_04430 PF00367 phosphotransferase system, EIIB NYR91_04430 PF02378 Phosphotransferase system, EIIC NYR91_04435 PF00664 ABC transporter transmembrane region NYR91_04435 PF00005 ABC transporter NYR91_04440 PF00664 ABC transporter transmembrane region NYR91_04440 PF00005 ABC transporter NYR91_04445 PF07681 DoxX NYR91_04450 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily NYR91_04455 PF12833 Helix-turn-helix domain NYR91_04455 PF02311 AraC-like ligand binding domain NYR91_04465 PF01261 Xylose isomerase-like TIM barrel NYR91_04470 PF02894 Oxidoreductase family, C-terminal alpha/beta domain NYR91_04470 PF01408 Oxidoreductase family, NAD-binding Rossmann fold NYR91_04475 PF07730 Histidine kinase NYR91_04480 PF00072 Response regulator receiver domain NYR91_04480 PF00196 Bacterial regulatory proteins, luxR family NYR91_04485 PF00005 ABC transporter NYR91_04505 PF03551 Transcriptional regulator PadR-like family NYR91_04505 PF10400 Virulence activator alpha C-term NYR91_04510 PF01674 Lipase (class 2) NYR91_04515 PF01757 Acyltransferase family NYR91_04520 PF12867 DinB superfamily NYR91_04525 PF07690 Major Facilitator Superfamily NYR91_04530 PF01047 MarR family NYR91_04535 PF09924 Uncharacterised conserved protein (DUF2156) NYR91_04535 PF03706 Lysylphosphatidylglycerol synthase TM region NYR91_04540 PF01497 Periplasmic binding protein NYR91_04545 PF01032 FecCD transport family NYR91_04550 PF01032 FecCD transport family NYR91_04555 PF02567 Phenazine biosynthesis-like protein NYR91_04560 PF00881 Nitroreductase family NYR91_04565 PF14151 YfhD-like protein NYR91_04570 PF14152 YfhE-like protein NYR91_04575 PF08338 Domain of unknown function (DUF1731) NYR91_04575 PF01370 NAD dependent epimerase/dehydratase family NYR91_04580 PF02631 RecX family NYR91_04585 PF08838 Protein of unknown function (DUF1811) NYR91_04590 PF07690 Major Facilitator Superfamily NYR91_04595 PF08176 Small acid-soluble spore protein K family NYR91_04600 PF14043 WVELL protein NYR91_04605 PF08239 Bacterial SH3 domain NYR91_04610 PF13630 SdpI/YhfL protein family NYR91_04615 PF00561 alpha/beta hydrolase fold NYR91_04620 PF00535 Glycosyl transferase family 2 NYR91_04625 PF09586 Bacterial membrane protein YfhO NYR91_04630 PF04307 LexA-binding, inner membrane-associated putative hydrolase NYR91_04635 PF14815 NUDIX domain NYR91_04635 PF00730 HhH-GPD superfamily base excision DNA repair protein NYR91_04650 PF04259 Small, acid-soluble spore protein, gamma-type NYR91_04655 PF14182 YgaB-like protein NYR91_04660 PF04167 Protein of unknown function (DUF402) NYR91_04665 PF00664 ABC transporter transmembrane region NYR91_04665 PF00005 ABC transporter NYR91_04670 PF06081 Aromatic acid exporter family member 1 NYR91_04675 PF00202 Aminotransferase class-III NYR91_04680 PF00578 AhpC/TSA family NYR91_04685 PF01475 Ferric uptake regulator family NYR91_04690 PF11023 Zinc-ribbon containing domain NYR91_04695 PF14540 Nucleotidyltransferase-like NYR91_04695 PF18576 Helix-turn-helix domain NYR91_04795 PF07070 SpoOM protein NYR91_04805 PF07875 Coat F domain NYR91_04810 PF03575 Peptidase family S51 NYR91_04815 PF01964 Radical SAM ThiC family NYR91_04815 PF13667 ThiC-associated domain NYR91_04820 PF13040 Fur-regulated basic protein B NYR91_04825 PF06628 Catalase-related immune-responsive NYR91_04825 PF00199 Catalase NYR91_04830 PF00005 ABC transporter NYR91_04835 PF09084 NMT1/THI5 like NYR91_04840 PF00528 Binding-protein-dependent transport system inner membrane component NYR91_04845 PF00296 Luciferase-like monooxygenase NYR91_04855 PF00253 Ribosomal protein S14p/S29e NYR91_04865 PF01381 Helix-turn-helix NYR91_04880 PF08331 Domain of unknown function (DUF1730) NYR91_04885 PF12671 Putative amidase domain NYR91_04890 PF00588 SpoU rRNA Methylase family NYR91_04895 PF13171 Protein of unknown function (DUF4004) NYR91_04900 PF04519 Polymer-forming cytoskeletal NYR91_04910 PF06798 PrkA serine protein kinase C-terminal domain NYR91_04910 PF08298 PrkA AAA domain NYR91_04915 PF04285 Protein of unknown function (DUF444) NYR91_04920 PF01047 MarR family NYR91_04930 PF07690 Major Facilitator Superfamily NYR91_04935 PF03358 NADPH-dependent FMN reductase NYR91_04955 PF00392 Bacterial regulatory proteins, gntR family NYR91_04960 PF00005 ABC transporter NYR91_04965 PF00005 ABC transporter NYR91_04970 PF12679 ABC-2 family transporter protein NYR91_04975 PF00313 'Cold-shock' DNA-binding domain NYR91_04980 PF03180 NLPA lipoprotein NYR91_04985 PF07694 5TMR of 5TMR-LYT NYR91_04985 PF00990 Diguanylate cyclase, GGDEF domain NYR91_04990 PF00375 Sodium:dicarboxylate symporter family NYR91_05000 PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) NYR91_05010 PF07875 Coat F domain NYR91_05015 PF02872 5'-nucleotidase, C-terminal domain NYR91_05015 PF00746 LPXTG cell wall anchor motif NYR91_05015 PF00149 Calcineurin-like phosphoesterase NYR91_05015 PF00565 Staphylococcal nuclease homologue NYR91_05020 PF04203 Sortase domain NYR91_05025 PF01479 S4 domain NYR91_05025 PF00849 RNA pseudouridylate synthase NYR91_05030 PF17326 Family of unknown function (DUF5365) NYR91_05035 PF00571 CBS domain NYR91_05040 PF13419 Haloacid dehalogenase-like hydrolase NYR91_05045 PF00795 Carbon-nitrogen hydrolase NYR91_05045 PF00583 Acetyltransferase (GNAT) family NYR91_05050 PF00202 Aminotransferase class-III NYR91_05055 PF04309 Glycerol-3-phosphate responsive antiterminator NYR91_05060 PF00230 Major intrinsic protein NYR91_05065 PF02782 FGGY family of carbohydrate kinases, C-terminal domain NYR91_05065 PF00370 FGGY family of carbohydrate kinases, N-terminal domain NYR91_05070 PF01266 FAD dependent oxidoreductase NYR91_05070 PF16901 C-terminal domain of alpha-glycerophosphate oxidase NYR91_05075 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II NYR91_05075 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain NYR91_05075 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I NYR91_05075 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III NYR91_05080 PF13185 GAF domain NYR91_05080 PF07730 Histidine kinase NYR91_05085 PF00196 Bacterial regulatory proteins, luxR family NYR91_05085 PF00072 Response regulator receiver domain NYR91_05090 PF03358 NADPH-dependent FMN reductase NYR91_05095 PF14148 YhdB-like protein NYR91_05100 PF13028 Protein of unknown function (DUF3889) NYR91_05105 PF00877 NlpC/P60 family NYR91_05105 PF01476 LysM domain NYR91_05110 PF02082 Transcriptional regulator NYR91_05115 PF05552 Conserved TM helix NYR91_05120 PF04293 SpoVR like protein NYR91_05125 PF00245 Alkaline phosphatase NYR91_05130 PF01476 LysM domain NYR91_05130 PF00877 NlpC/P60 family NYR91_05135 PF03466 LysR substrate binding domain NYR91_05135 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NYR91_05140 PF00285 Citrate synthase, C-terminal domain NYR91_05150 PF13520 Amino acid permease NYR91_05155 PF00209 Sodium:neurotransmitter symporter family NYR91_05160 PF00155 Aminotransferase class I and II NYR91_05160 PF00392 Bacterial regulatory proteins, gntR family NYR91_05165 PF00583 Acetyltransferase (GNAT) family NYR91_05170 PF17453 Sigma-M inhibitor NYR91_05175 PF13791 Sigma factor regulator C-terminal NYR91_05175 PF13800 Sigma factor regulator N-terminal NYR91_05180 PF04542 Sigma-70 region 2 NYR91_05180 PF08281 Sigma-70, region 4 NYR91_05185 PF00248 Aldo/keto reductase family NYR91_05190 PF01553 Acyltransferase NYR91_05195 PF03471 Transporter associated domain NYR91_05195 PF01595 Cyclin M transmembrane N-terminal domain NYR91_05195 PF00571 CBS domain NYR91_05200 PF13411 MerR HTH family regulatory protein NYR91_05205 PF00155 Aminotransferase class I and II NYR91_05210 PF00571 CBS domain NYR91_05210 PF03471 Transporter associated domain NYR91_05210 PF01595 Cyclin M transmembrane N-terminal domain NYR91_05215 PF02537 CrcB-like protein, Camphor Resistance (CrcB) NYR91_05220 PF02537 CrcB-like protein, Camphor Resistance (CrcB) NYR91_05230 PF17444 Uncharacterized YhdX-like NYR91_05235 PF00924 Mechanosensitive ion channel NYR91_05240 PF02146 Sir2 family NYR91_05245 PF01522 Polysaccharide deacetylase NYR91_05250 PF01063 Amino-transferase class IV NYR91_05255 PF03553 Na+/H+ antiporter family NYR91_05260 PF00582 Universal stress protein family NYR91_05270 PF00005 ABC transporter NYR91_05270 PF00664 ABC transporter transmembrane region NYR91_05275 PF00005 ABC transporter NYR91_05275 PF00664 ABC transporter transmembrane region NYR91_05280 PF13460 NAD(P)H-binding NYR91_05290 PF00269 Small, acid-soluble spore proteins, alpha/beta type NYR91_05295 PF17277 Family of unknown function (DUF5342) NYR91_05300 PF14398 YheC/D like ATP-grasp NYR91_05305 PF14398 YheC/D like ATP-grasp NYR91_05310 PF04286 Protein of unknown function (DUF445) NYR91_05315 PF06133 Control of competence regulator ComK, YlbF/YmcA NYR91_05320 PF08713 DNA alkylation repair enzyme NYR91_05330 PF04055 Radical SAM superfamily NYR91_05335 PF00999 Sodium/hydrogen exchanger family NYR91_05340 PF02080 TrkA-C domain NYR91_05350 PF00378 Enoyl-CoA hydratase/isomerase NYR91_05355 PF14120 YhzD-like protein NYR91_05360 PF13732 Domain of unknown function (DUF4162) NYR91_05360 PF00005 ABC transporter NYR91_05375 PF00149 Calcineurin-like phosphoesterase NYR91_05380 PF13514 AAA domain NYR91_05385 PF01966 HD domain NYR91_05390 PF14147 Sporulation protein YhaL NYR91_05400 PF09680 Family of unknown function NYR91_05405 PF09680 Family of unknown function NYR91_05415 PF11667 Putative zincin peptidase NYR91_05420 PF08963 Protein of unknown function (DUF1878) NYR91_05425 PF01047 MarR family NYR91_05430 PF12732 YtxH-like protein NYR91_05440 PF17099 Tryptophan transporter TrpP NYR91_05445 PF00266 Aminotransferase class-V NYR91_05450 PF01230 HIT domain NYR91_05455 PF00005 ABC transporter NYR91_05460 PF05975 Bacterial ABC transporter protein EcsB NYR91_05465 PF12787 EcsC protein family NYR91_05470 PF01546 Peptidase family M20/M25/M40 NYR91_05470 PF07687 Peptidase dimerisation domain NYR91_05485 PF03992 Antibiotic biosynthesis monooxygenase NYR91_05490 PF00912 Transglycosylase NYR91_05490 PF00905 Penicillin binding protein transpeptidase domain NYR91_05495 PF01208 Uroporphyrinogen decarboxylase (URO-D) NYR91_05500 PF00762 Ferrochelatase NYR91_05505 PF01593 Flavin containing amine oxidoreductase NYR91_05510 PF00440 Bacterial regulatory proteins, tetR family NYR91_05510 PF17932 Tetracyclin repressor-like, C-terminal domain NYR91_05520 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III NYR91_05520 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal NYR91_05525 PF10086 YhfC intramembrane metalloprotease NYR91_05535 PF05343 M42 glutamyl aminopeptidase NYR91_05540 PF04266 ASCH domain NYR91_05545 PF00375 Sodium:dicarboxylate symporter family NYR91_05550 PF14149 YhfH-like protein NYR91_05555 PF12706 Beta-lactamase superfamily domain NYR91_05560 PF03099 Biotin/lipoate A/B protein ligase family NYR91_05560 PF10437 Bacterial lipoate protein ligase C-terminus NYR91_05565 PF13460 NAD(P)H-binding NYR91_05570 PF00501 AMP-binding enzyme NYR91_05570 PF13193 AMP-binding enzyme C-terminal domain NYR91_05580 PF01435 Peptidase family M48 NYR91_05580 PF16491 CAAX prenyl protease N-terminal, five membrane helices NYR91_05585 PF00082 Subtilase family NYR91_05585 PF05922 Peptidase inhibitor I9 NYR91_05590 PF00583 Acetyltransferase (GNAT) family NYR91_05595 PF00107 Zinc-binding dehydrogenase NYR91_05595 PF08240 Alcohol dehydrogenase GroES-like domain NYR91_05600 PF01497 Periplasmic binding protein NYR91_05605 PF00300 Histidine phosphatase superfamily (branch 1) NYR91_05610 PF00108 Thiolase, N-terminal domain NYR91_05610 PF02803 Thiolase, C-terminal domain NYR91_05615 PF13193 AMP-binding enzyme C-terminal domain NYR91_05615 PF00501 AMP-binding enzyme NYR91_05620 PF02632 BioY family NYR91_05625 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NYR91_05630 PF00355 Rieske [2Fe-2S] domain NYR91_05630 PF01266 FAD dependent oxidoreductase NYR91_05640 PF08858 IDEAL domain NYR91_05645 PF06338 ComK protein NYR91_05655 PF05901 Excalibur calcium-binding domain NYR91_05660 PF00474 Sodium:solute symporter family NYR91_05665 PF11755 Protein of unknown function (DUF3311) NYR91_05675 PF09335 SNARE associated Golgi protein NYR91_05680 PF10502 Signal peptidase, peptidase S26 NYR91_05685 PF01494 FAD binding domain NYR91_05690 PF01047 MarR family NYR91_05695 PF07690 Major Facilitator Superfamily NYR91_05700 PF01408 Oxidoreductase family, NAD-binding Rossmann fold NYR91_05700 PF02894 Oxidoreductase family, C-terminal alpha/beta domain NYR91_05705 PF05116 Sucrose-6F-phosphate phosphohydrolase NYR91_05710 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family NYR91_05715 PF00356 Bacterial regulatory proteins, lacI family NYR91_05720 PF05145 Transition state regulatory protein AbrB NYR91_05725 PF07690 Major Facilitator Superfamily NYR91_05730 PF12793 Sugar transport-related sRNA regulator N-term NYR91_05730 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle NYR91_05735 PF03860 Domain of Unknown Function (DUF326) NYR91_05740 PF02915 Rubrerythrin NYR91_05745 PF12705 PD-(D/E)XK nuclease superfamily NYR91_05745 PF13361 UvrD-like helicase C-terminal domain NYR91_05750 PF12705 PD-(D/E)XK nuclease superfamily NYR91_05750 PF00580 UvrD/REP helicase N-terminal domain NYR91_05750 PF13361 UvrD-like helicase C-terminal domain NYR91_05755 PF00149 Calcineurin-like phosphoesterase NYR91_05755 PF12320 Type 5 capsule protein repressor C-terminal domain NYR91_05760 PF13476 AAA domain NYR91_05770 PF10676 Spore germination protein gerPA/gerPF NYR91_05775 PF10970 Spore germination protein GerPE NYR91_05785 PF10737 Spore germination protein GerPC NYR91_05790 PF10803 Spore germination GerPB NYR91_05795 PF10676 Spore germination protein gerPA/gerPF NYR91_05800 PF09388 Spo0E like sporulation regulatory protein NYR91_05805 PF08757 CotH kinase protein NYR91_05810 PF01557 Fumarylacetoacetate (FAA) hydrolase family NYR91_05815 PF07457 Protein of unknown function (DUF1516) NYR91_05820 PF00082 Subtilase family NYR91_05820 PF17936 Bacterial Ig domain NYR91_05825 PF10949 Protein of unknown function (DUF2777) NYR91_05830 PF00733 Asparagine synthase NYR91_05830 PF13537 Glutamine amidotransferase domain NYR91_05840 PF01554 MatE NYR91_05845 PF02311 AraC-like ligand binding domain NYR91_05845 PF12833 Helix-turn-helix domain NYR91_05850 PF00356 Bacterial regulatory proteins, lacI family NYR91_05855 PF01408 Oxidoreductase family, NAD-binding Rossmann fold NYR91_05855 PF02894 Oxidoreductase family, C-terminal alpha/beta domain NYR91_05860 PF05163 DinB family NYR91_05870 PF00392 Bacterial regulatory proteins, gntR family NYR91_05870 PF00155 Aminotransferase class I and II NYR91_05875 PF13599 Pentapeptide repeats (9 copies) NYR91_05880 PF08386 TAP-like protein NYR91_05880 PF00561 alpha/beta hydrolase fold NYR91_05890 PF01747 ATP-sulfurylase NYR91_05890 PF14306 PUA-like domain NYR91_05895 PF01507 Phosphoadenosine phosphosulfate reductase family NYR91_05900 PF04029 2-phosphosulpholactate phosphatase NYR91_05905 PF02679 (2R)-phospho-3-sulfolactate synthase (ComA) NYR91_05910 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 NYR91_05915 PF13378 Enolase C-terminal domain-like NYR91_05915 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain NYR91_05920 PF07690 Major Facilitator Superfamily NYR91_05925 PF18014 Acetyltransferase (GNAT) domain NYR91_05925 PF13673 Acetyltransferase (GNAT) domain NYR91_05930 PF13673 Acetyltransferase (GNAT) domain NYR91_05935 PF02574 Homocysteine S-methyltransferase NYR91_05935 PF02219 Methylenetetrahydrofolate reductase NYR91_05940 PF04461 Protein of unknown function (DUF520) NYR91_05945 PF17783 CvfB-like winged helix domain NYR91_05945 PF13509 S1 domain NYR91_05950 PF12650 Domain of unknown function (DUF3784) NYR91_05955 PF02645 Uncharacterised protein, DegV family COG1307 NYR91_05960 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) NYR91_05960 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 NYR91_05965 PF12690 Intracellular proteinase inhibitor NYR91_05970 PF12758 Protein of unknown function (DUF3813) NYR91_05985 PF00326 Prolyl oligopeptidase family NYR91_05990 PF01883 Iron-sulfur cluster assembly protein NYR91_06000 PF01565 FAD binding domain NYR91_06005 PF07690 Major Facilitator Superfamily NYR91_06010 PF02774 Semialdehyde dehydrogenase, dimerisation domain NYR91_06010 PF01118 Semialdehyde dehydrogenase, NAD binding domain NYR91_06015 PF01960 ArgJ family NYR91_06020 PF00696 Amino acid kinase family NYR91_06025 PF00202 Aminotransferase class-III NYR91_06030 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain NYR91_06030 PF00117 Glutamine amidotransferase class-I NYR91_06035 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain NYR91_06035 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain NYR91_06040 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain NYR91_06040 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain NYR91_06045 PF14168 YjzC-like protein NYR91_06050 PF11151 Protein of unknown function (DUF2929) NYR91_06065 PF02608 ABC transporter substrate-binding protein PnrA-like NYR91_06070 PF10815 ComZ NYR91_06080 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal NYR91_06080 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III NYR91_06085 PF02801 Beta-ketoacyl synthase, C-terminal domain NYR91_06085 PF00109 Beta-ketoacyl synthase, N-terminal domain NYR91_06090 PF10026 Predicted Zn-dependent protease (DUF2268) NYR91_06095 PF08352 Oligopeptide/dipeptide transporter, C-terminal region NYR91_06095 PF00005 ABC transporter NYR91_06100 PF00005 ABC transporter NYR91_06100 PF08352 Oligopeptide/dipeptide transporter, C-terminal region NYR91_06105 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle NYR91_06110 PF00528 Binding-protein-dependent transport system inner membrane component NYR91_06115 PF00528 Binding-protein-dependent transport system inner membrane component NYR91_06115 PF12911 N-terminal TM domain of oligopeptide transport permease C NYR91_06120 PF12227 Protein of unknown function (DUF3603) NYR91_06125 PF00579 tRNA synthetases class I (W and Y) NYR91_06130 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle NYR91_06135 PF00528 Binding-protein-dependent transport system inner membrane component NYR91_06140 PF12911 N-terminal TM domain of oligopeptide transport permease C NYR91_06140 PF00528 Binding-protein-dependent transport system inner membrane component NYR91_06145 PF08352 Oligopeptide/dipeptide transporter, C-terminal region NYR91_06145 PF00005 ABC transporter NYR91_06150 PF08352 Oligopeptide/dipeptide transporter, C-terminal region NYR91_06150 PF00005 ABC transporter NYR91_06155 PF07690 Major Facilitator Superfamily NYR91_06160 PF13508 Acetyltransferase (GNAT) domain NYR91_06165 PF03960 ArsC family NYR91_06170 PF03741 Integral membrane protein TerC family NYR91_06180 PF05389 Negative regulator of genetic competence (MecA) NYR91_06190 PF06054 Competence protein CoiA-like family NYR91_06195 PF08439 Oligopeptidase F NYR91_06195 PF01432 Peptidase family M3 NYR91_06210 PF01152 Bacterial-like globin NYR91_06215 PF01464 Transglycosylase SLT domain NYR91_06220 PF01928 CYTH domain NYR91_06230 PF04607 Region found in RelA / SpoT proteins NYR91_06235 PF01513 ATP-NAD kinase NYR91_06240 PF00849 RNA pseudouridylate synthase NYR91_06245 PF00149 Calcineurin-like phosphoesterase NYR91_06250 PF02080 TrkA-C domain NYR91_06250 PF00999 Sodium/hydrogen exchanger family NYR91_06250 PF02254 TrkA-N domain NYR91_06255 PF03070 TENA/THI-4/PQQC family NYR91_06260 PF02581 Thiamine monophosphate synthase NYR91_06265 PF01266 FAD dependent oxidoreductase NYR91_06270 PF02597 ThiS family NYR91_06275 PF05690 Thiazole biosynthesis protein ThiG NYR91_06280 PF00899 ThiF family NYR91_06285 PF08543 Phosphomethylpyrimidine kinase NYR91_06295 PF14153 Spore coat protein CotO NYR91_06300 PF10612 Spore coat protein Z NYR91_06305 PF10612 Spore coat protein Z NYR91_06310 PF07552 Spore Coat Protein X and V domain NYR91_06320 PF07552 Spore Coat Protein X and V domain NYR91_06325 PF07098 Protein of unknown function (DUF1360) NYR91_06340 PF14069 Stage VI sporulation protein F NYR91_06345 PF00580 UvrD/REP helicase N-terminal domain NYR91_06345 PF13361 UvrD-like helicase C-terminal domain NYR91_06355 PF13673 Acetyltransferase (GNAT) domain NYR91_06365 PF00756 Putative esterase NYR91_06370 PF01053 Cys/Met metabolism PLP-dependent enzyme NYR91_06375 PF01053 Cys/Met metabolism PLP-dependent enzyme NYR91_06380 PF13302 Acetyltransferase (GNAT) domain NYR91_06405 PF01435 Peptidase family M48 NYR91_06445 PF05105 Bacteriophage holin family NYR91_06465 PF08863 YolD-like protein NYR91_06485 PF18593 CdiI immunity protein NYR91_06490 PF03992 Antibiotic biosynthesis monooxygenase NYR91_06500 PF08279 HTH domain NYR91_06500 PF05043 Mga helix-turn-helix domain NYR91_06500 PF00874 PRD domain NYR91_06500 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 NYR91_06505 PF02378 Phosphotransferase system, EIIC NYR91_06505 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 NYR91_06505 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit NYR91_06510 PF01238 Phosphomannose isomerase type I NYR91_06515 PF11208 Protein of unknown function (DUF2992) NYR91_06520 PF13302 Acetyltransferase (GNAT) domain NYR91_06530 PF04073 Aminoacyl-tRNA editing domain NYR91_06535 PF13783 Domain of unknown function (DUF4177) NYR91_06540 PF14154 Domain of unknown function (DUF4306) NYR91_06545 PF01040 UbiA prenyltransferase family NYR91_06555 PF11738 Protein of unknown function (DUF3298) NYR91_06555 PF13739 Deacetylase PdaC NYR91_06555 PF01522 Polysaccharide deacetylase NYR91_06560 PF10901 Protein of unknown function (DUF2690) NYR91_06565 PF14070 Putative motility protein NYR91_06570 PF10026 Predicted Zn-dependent protease (DUF2268) NYR91_06575 PF10990 Protein of unknown function (DUF2809) NYR91_06580 PF14172 Domain of unknown function (DUF4309) NYR91_06585 PF12838 4Fe-4S dicluster domain NYR91_06585 PF04879 Molybdopterin oxidoreductase Fe4S4 domain NYR91_06585 PF00384 Molybdopterin oxidoreductase NYR91_06585 PF01568 Molydopterin dinucleotide binding domain NYR91_06585 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region NYR91_06590 PF07849 Protein of unknown function (DUF1641) NYR91_06595 PF11611 Domain of unknown function (DUF4352) NYR91_06600 PF00293 NUDIX domain NYR91_06610 PF00067 Cytochrome P450 NYR91_06615 PF04101 Glycosyltransferase family 28 C-terminal domain NYR91_06625 PF02602 Uroporphyrinogen-III synthase HemD NYR91_06630 PF03649 Uncharacterised protein family (UPF0014) NYR91_06635 PF00005 ABC transporter NYR91_06640 PF13536 Putative multidrug resistance efflux transporter NYR91_06650 PF07849 Protein of unknown function (DUF1641) NYR91_06655 PF07992 Pyridine nucleotide-disulphide oxidoreductase NYR91_06660 PF02614 Glucuronate isomerase NYR91_06670 PF02615 Malate/L-lactate dehydrogenase NYR91_06675 PF08240 Alcohol dehydrogenase GroES-like domain NYR91_06675 PF00107 Zinc-binding dehydrogenase NYR91_06680 PF03786 D-mannonate dehydratase (UxuA) NYR91_06685 PF00106 short chain dehydrogenase NYR91_06690 PF07690 Major Facilitator Superfamily NYR91_06695 PF00356 Bacterial regulatory proteins, lacI family NYR91_06700 PF01232 Mannitol dehydrogenase Rossmann domain NYR91_06700 PF08125 Mannitol dehydrogenase C-terminal domain NYR91_06705 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus NYR91_06705 PF08666 SAF domain NYR91_06710 PF01925 Sulfite exporter TauE/SafE NYR91_06715 PF05163 DinB family NYR91_06720 PF00004 ATPase family associated with various cellular activities (AAA) NYR91_06725 PF18801 response regulator aspartate phosphatase H, N terminal NYR91_06735 PF03795 YCII-related domain NYR91_06740 PF01510 N-acetylmuramoyl-L-alanine amidase NYR91_06740 PF01471 Putative peptidoglycan binding domain NYR91_06740 PF01476 LysM domain NYR91_06745 PF08000 Bacterial PH domain NYR91_06750 PF05908 Poly-gamma-glutamate hydrolase NYR91_06755 PF05067 Manganese containing catalase NYR91_06760 PF06114 IrrE N-terminal-like domain NYR91_06765 PF01381 Helix-turn-helix NYR91_06780 PF01695 IstB-like ATP binding protein NYR91_06795 PF17356 Phage-like element PBSX protein XtrA NYR91_06800 PF08281 Sigma-70, region 4 NYR91_06805 PF03592 Terminase small subunit NYR91_06805 PF10668 Phage terminase small subunit NYR91_06810 PF17288 Terminase RNAseH like domain NYR91_06810 PF04466 Phage terminase large subunit NYR91_06815 PF04860 Phage portal protein NYR91_06820 PF14550 Putative phage serine protease XkdF NYR91_06825 PF05065 Phage capsid family NYR91_06830 PF11436 Protein of unknown function (DUF3199) NYR91_06835 PF12206 Domain of unknown function (DUF3599) NYR91_06840 PF04883 Bacteriophage HK97-gp10, putative tail-component NYR91_06855 PF17482 Phage tail sheath C-terminal domain NYR91_06855 PF17481 Phage tail sheath protein beta-sandwich domain NYR91_06855 PF04984 Phage tail sheath protein subtilisin-like domain NYR91_06860 PF09393 Phage tail tube protein NYR91_06865 PF08890 Phage XkdN-like tail assembly chaperone protein, TAC NYR91_06875 PF01464 Transglycosylase SLT domain NYR91_06880 PF01476 LysM domain NYR91_06890 PF10844 Protein of unknown function (DUF2577) NYR91_06895 PF10934 Protein of unknown function (DUF2634) NYR91_06900 PF04865 Baseplate J-like protein NYR91_06905 PF10076 Uncharacterised protein conserved in bacteria (DUF2313) NYR91_06920 PF09636 XkdW protein NYR91_06925 PF09693 Phage uncharacterised protein (Phage_XkdX) NYR91_06935 PF10779 Haemolysin XhlA NYR91_06940 PF04688 SPP1 phage holin NYR91_06945 PF01510 N-acetylmuramoyl-L-alanine amidase NYR91_06945 PF01476 LysM domain NYR91_06945 PF01471 Putative peptidoglycan binding domain NYR91_06955 PF14185 Antitoxin SpoIISB, type II toxin-antitoxin system NYR91_06960 PF14171 Toxin SpoIISA, type II toxin-antitoxin system NYR91_06965 PF01384 Phosphate transporter family NYR91_06970 PF01865 Protein of unknown function DUF47 NYR91_06975 PF13520 Amino acid permease NYR91_06980 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily NYR91_06990 PF13231 Dolichyl-phosphate-mannose-protein mannosyltransferase NYR91_06995 PF00535 Glycosyl transferase family 2 NYR91_07005 PF13180 PDZ domain NYR91_07010 PF03807 NADP oxidoreductase coenzyme F420-dependent NYR91_07010 PF14748 Pyrroline-5-carboxylate reductase dimerisation NYR91_07015 PF04951 D-aminopeptidase NYR91_07020 PF00528 Binding-protein-dependent transport system inner membrane component NYR91_07025 PF00528 Binding-protein-dependent transport system inner membrane component NYR91_07025 PF12911 N-terminal TM domain of oligopeptide transport permease C NYR91_07030 PF00005 ABC transporter NYR91_07030 PF08352 Oligopeptide/dipeptide transporter, C-terminal region NYR91_07035 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle NYR91_07040 PF02016 LD-carboxypeptidase N-terminal domain NYR91_07040 PF17676 LD-carboxypeptidase C-terminal domain NYR91_07045 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain NYR91_07045 PF13378 Enolase C-terminal domain-like NYR91_07050 PF00877 NlpC/P60 family NYR91_07055 PF08352 Oligopeptide/dipeptide transporter, C-terminal region NYR91_07055 PF00005 ABC transporter NYR91_07060 PF10282 Lactonase, 7-bladed beta-propeller NYR91_07070 PF03061 Thioesterase superfamily NYR91_07075 PF00970 Oxidoreductase FAD-binding domain NYR91_07075 PF00042 Globin NYR91_07075 PF00175 Oxidoreductase NAD-binding domain NYR91_07085 PF04239 Protein of unknown function (DUF421) NYR91_07090 PF12867 DinB superfamily NYR91_07095 PF13302 Acetyltransferase (GNAT) domain NYR91_07100 PF00893 Small Multidrug Resistance protein NYR91_07105 PF00893 Small Multidrug Resistance protein NYR91_07110 PF00551 Formyl transferase NYR91_07110 PF01842 ACT domain NYR91_07115 PF00696 Amino acid kinase family NYR91_07115 PF01472 PUA domain NYR91_07120 PF00171 Aldehyde dehydrogenase family NYR91_07125 PF02566 OsmC-like protein NYR91_07130 PF01047 MarR family NYR91_07135 PF02566 OsmC-like protein NYR91_07140 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region NYR91_07145 PF00300 Histidine phosphatase superfamily (branch 1) NYR91_07150 PF01717 Cobalamin-independent synthase, Catalytic domain NYR91_07150 PF08267 Cobalamin-independent synthase, N-terminal domain NYR91_07155 PF00082 Subtilase family NYR91_07160 PF01740 STAS domain NYR91_07165 PF02361 Cobalt transport protein NYR91_07170 PF00005 ABC transporter NYR91_07175 PF09819 ABC-type cobalt transport system, permease component NYR91_07180 PF07615 YKOF-related Family NYR91_07185 PF00072 Response regulator receiver domain NYR91_07185 PF00486 Transcriptional regulatory protein, C terminal NYR91_07190 PF00672 HAMP domain NYR91_07190 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NYR91_07190 PF00512 His Kinase A (phospho-acceptor) domain NYR91_07195 PF03413 Peptidase propeptide and YPEB domain NYR91_07200 PF03413 Peptidase propeptide and YPEB domain NYR91_07205 PF11132 Transcriptional regulator protein (SplA) NYR91_07215 PF00571 CBS domain NYR91_07215 PF01769 Divalent cation transporter NYR91_07215 PF03448 MgtE intracellular N domain NYR91_07220 PF13411 MerR HTH family regulatory protein NYR91_07235 PF01047 MarR family NYR91_07250 PF00149 Calcineurin-like phosphoesterase NYR91_07260 PF00535 Glycosyl transferase family 2 NYR91_07265 PF01068 ATP dependent DNA ligase domain NYR91_07270 PF02735 Ku70/Ku80 beta-barrel domain NYR91_07275 PF00563 EAL domain NYR91_07275 PF03707 Bacterial signalling protein N terminal repeat NYR91_07275 PF00990 Diguanylate cyclase, GGDEF domain NYR91_07280 PF09335 SNARE associated Golgi protein NYR91_07285 PF03741 Integral membrane protein TerC family NYR91_07290 PF04542 Sigma-70 region 2 NYR91_07295 PF12791 Anti-sigma factor N-terminus NYR91_07300 PF00269 Small, acid-soluble spore proteins, alpha/beta type NYR91_07305 PF08876 Domain of unknown function (DUF1836) NYR91_07310 PF01435 Peptidase family M48 NYR91_07315 PF02386 Cation transport protein NYR91_07330 PF01757 Acyltransferase family NYR91_07335 PF13426 PAS domain NYR91_07335 PF13188 PAS domain NYR91_07335 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NYR91_07335 PF00989 PAS fold NYR91_07335 PF00512 His Kinase A (phospho-acceptor) domain NYR91_07340 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain NYR91_07340 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain NYR91_07350 PF01008 Initiation factor 2 subunit family NYR91_07355 PF01636 Phosphotransferase enzyme family NYR91_07360 PF00795 Carbon-nitrogen hydrolase NYR91_07365 PF00155 Aminotransferase class I and II NYR91_07370 PF00016 Ribulose bisphosphate carboxylase large chain, catalytic domain NYR91_07370 PF02788 Ribulose bisphosphate carboxylase large chain, N-terminal domain NYR91_07380 PF00596 Class II Aldolase and Adducin N-terminal domain NYR91_07385 PF03079 ARD/ARD' family NYR91_07390 PF06803 Protein of unknown function (DUF1232) NYR91_07395 PF09388 Spo0E like sporulation regulatory protein NYR91_07405 PF00512 His Kinase A (phospho-acceptor) domain NYR91_07405 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NYR91_07405 PF02743 Cache domain NYR91_07410 PF01047 MarR family NYR91_07415 PF00691 OmpA family NYR91_07415 PF13677 Membrane MotB of proton-channel complex MotA/MotB NYR91_07420 PF01618 MotA/TolQ/ExbB proton channel family NYR91_07425 PF10431 C-terminal, D2-small domain, of ClpB protein NYR91_07425 PF07724 AAA domain (Cdc48 subfamily) NYR91_07425 PF00004 ATPase family associated with various cellular activities (AAA) NYR91_07425 PF17871 AAA lid domain NYR91_07435 PF06508 Queuosine biosynthesis protein QueC NYR91_07440 PF01242 6-pyruvoyl tetrahydropterin synthase NYR91_07445 PF04055 Radical SAM superfamily NYR91_07450 PF14489 QueF-like protein NYR91_07455 PF01638 HxlR-like helix-turn-helix NYR91_07465 PF01476 LysM domain NYR91_07470 PF01476 LysM domain NYR91_07475 PF00704 Glycosyl hydrolases family 18 NYR91_07480 PF11514 Protein of unknown function (DUF3219) NYR91_07485 PF09953 Uncharacterized protein conserved in bacteria (DUF2187) NYR91_07495 PF07486 Cell Wall Hydrolase NYR91_07500 PF01943 Polysaccharide biosynthesis protein NYR91_07505 PF00578 AhpC/TSA family NYR91_07520 PF00557 Metallopeptidase family M24 NYR91_07520 PF01321 Creatinase/Prolidase N-terminal domain NYR91_07525 PF00356 Bacterial regulatory proteins, lacI family NYR91_07525 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family NYR91_07530 PF00874 PRD domain NYR91_07530 PF03123 CAT RNA binding domain NYR91_07535 PF02378 Phosphotransferase system, EIIC NYR91_07535 PF00367 phosphotransferase system, EIIB NYR91_07535 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 NYR91_07540 PF00381 PTS HPr component phosphorylation site NYR91_07545 PF02896 PEP-utilising enzyme, TIM barrel domain NYR91_07545 PF05524 PEP-utilising enzyme, N-terminal NYR91_07545 PF00391 PEP-utilising enzyme, mobile domain NYR91_07550 PF11132 Transcriptional regulator protein (SplA) NYR91_07560 PF00583 Acetyltransferase (GNAT) family NYR91_07565 PF02743 Cache domain NYR91_07565 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NYR91_07565 PF00672 HAMP domain NYR91_07570 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase NYR91_07570 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase NYR91_07575 PF00188 Cysteine-rich secretory protein family NYR91_07580 PF00905 Penicillin binding protein transpeptidase domain NYR91_07580 PF03717 Penicillin-binding Protein dimerisation domain NYR91_07585 PF08447 PAS fold NYR91_07585 PF00989 PAS fold NYR91_07585 PF00512 His Kinase A (phospho-acceptor) domain NYR91_07585 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NYR91_07590 PF00155 Aminotransferase class I and II NYR91_07600 PF00072 Response regulator receiver domain NYR91_07600 PF01584 CheW-like domain NYR91_07605 PF14177 YkyB-like protein NYR91_07610 PF07690 Major Facilitator Superfamily NYR91_07615 PF03734 L,D-transpeptidase catalytic domain NYR91_07615 PF01476 LysM domain NYR91_07620 PF10518 TAT (twin-arginine translocation) pathway signal sequence NYR91_07620 PF00149 Calcineurin-like phosphoesterase NYR91_07630 PF00563 EAL domain NYR91_07630 PF10388 EAL-domain associated signalling protein domain NYR91_07635 PF08796 Protein of unknown function (DUF1797) NYR91_07640 PF04308 Ribonuclease H-like NYR91_07645 PF14156 Antirepressor AbbA NYR91_07655 PF03466 LysR substrate binding domain NYR91_07655 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NYR91_07660 PF00258 Flavodoxin NYR91_07670 PF00258 Flavodoxin NYR91_07675 PF08503 Tetrahydrodipicolinate succinyltransferase N-terminal NYR91_07675 PF00132 Bacterial transferase hexapeptide (six repeats) NYR91_07675 PF14602 Hexapeptide repeat of succinyl-transferase NYR91_07680 PF07687 Peptidase dimerisation domain NYR91_07680 PF01546 Peptidase family M20/M25/M40 NYR91_07685 PF03698 Uncharacterised protein family (UPF0180) NYR91_07690 PF00924 Mechanosensitive ion channel NYR91_07695 PF10417 C-terminal domain of 1-Cys peroxiredoxin NYR91_07695 PF00578 AhpC/TSA family NYR91_07700 PF00578 AhpC/TSA family NYR91_07715 PF12804 MobA-like NTP transferase domain NYR91_07720 PF00899 ThiF family NYR91_07725 PF03453 MoeA N-terminal region (domain I and II) NYR91_07725 PF03454 MoeA C-terminal region (domain IV) NYR91_07725 PF00994 Probable molybdopterin binding domain NYR91_07730 PF03205 Molybdopterin guanine dinucleotide synthesis protein B NYR91_07735 PF02391 MoaE protein NYR91_07740 PF02597 ThiS family NYR91_07745 PF00005 ABC transporter NYR91_07745 PF00664 ABC transporter transmembrane region NYR91_07750 PF00005 ABC transporter NYR91_07750 PF00664 ABC transporter transmembrane region NYR91_07755 PF04893 Yip1 domain NYR91_07760 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion NYR91_07765 PF00005 ABC transporter NYR91_07770 PF12704 MacB-like periplasmic core domain NYR91_07770 PF02687 FtsX-like permease family NYR91_07775 PF00455 DeoR C terminal sensor domain NYR91_07775 PF08220 DeoR-like helix-turn-helix domain NYR91_07780 PF00294 pfkB family carbohydrate kinase NYR91_07785 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit NYR91_07785 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 NYR91_07790 PF10502 Signal peptidase, peptidase S26 NYR91_07800 PF00005 ABC transporter NYR91_07800 PF12848 ABC transporter NYR91_07805 PF02558 Ketopantoate reductase PanE/ApbA NYR91_07805 PF08546 Ketopantoate reductase PanE/ApbA C terminal NYR91_07810 PF02073 Thermophilic metalloprotease (M29) NYR91_07815 PF17447 Uncharacterized YkpC-like NYR91_07825 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin NYR91_07825 PF18277 AbrB C-terminal domain NYR91_07830 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NYR91_07830 PF00512 His Kinase A (phospho-acceptor) domain NYR91_07830 PF00989 PAS fold NYR91_07835 PF06094 Gamma-glutamyl cyclotransferase, AIG2-like NYR91_07840 PF02080 TrkA-C domain NYR91_07840 PF02254 TrkA-N domain NYR91_07845 PF13382 Adenine deaminase C-terminal domain NYR91_07845 PF01979 Amidohydrolase family NYR91_07850 PF00753 Metallo-beta-lactamase superfamily NYR91_07850 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain NYR91_07850 PF17770 Ribonuclease J C-terminal domain NYR91_07855 PF07288 Protein of unknown function (DUF1447) NYR91_07865 PF01327 Polypeptide deformylase NYR91_07875 PF10368 Putative cell-wall binding lipoprotein NYR91_07880 PF00676 Dehydrogenase E1 component NYR91_07885 PF02779 Transketolase, pyrimidine binding domain NYR91_07885 PF02780 Transketolase, C-terminal domain NYR91_07890 PF00364 Biotin-requiring enzyme NYR91_07890 PF02817 e3 binding domain NYR91_07890 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) NYR91_07895 PF07992 Pyridine nucleotide-disulphide oxidoreductase NYR91_07895 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain NYR91_07905 PF13790 SR1 protein NYR91_07910 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain NYR91_07910 PF01276 Orn/Lys/Arg decarboxylase, major domain NYR91_07915 PF05256 Uncharacterised protein family (UPF0223) NYR91_07920 PF06335 Protein of unknown function (DUF1054) NYR91_07930 PF00459 Inositol monophosphatase family NYR91_07935 PF00583 Acetyltransferase (GNAT) family NYR91_07940 PF04072 Leucine carboxyl methyltransferase NYR91_07945 PF02868 Thermolysin metallopeptidase, alpha-helical domain NYR91_07945 PF07504 Fungalysin/Thermolysin Propeptide Motif NYR91_07945 PF03413 Peptidase propeptide and YPEB domain NYR91_07945 PF01447 Thermolysin metallopeptidase, catalytic domain NYR91_07960 PF04542 Sigma-70 region 2 NYR91_07960 PF08281 Sigma-70, region 4 NYR91_07965 PF13490 Putative zinc-finger NYR91_07975 PF17259 Family of unknown function (DUF5325) NYR91_07980 PF14492 Elongation Factor G, domain II NYR91_07980 PF00009 Elongation factor Tu GTP binding domain NYR91_07980 PF03144 Elongation factor Tu domain 2 NYR91_07980 PF00679 Elongation factor G C-terminus NYR91_07985 PF14036 YlaH-like protein NYR91_07990 PF09963 Uncharacterized protein conserved in bacteria (DUF2197) NYR91_07995 PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) NYR91_08000 PF13638 PIN domain NYR91_08000 PF02562 PhoH-like protein NYR91_08010 PF04960 Glutaminase NYR91_08015 PF07408 Protein of unknown function (DUF1507) NYR91_08020 PF01098 Cell cycle protein NYR91_08025 PF02785 Biotin carboxylase C-terminal domain NYR91_08025 PF00289 Biotin carboxylase, N-terminal domain NYR91_08025 PF00364 Biotin-requiring enzyme NYR91_08025 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain NYR91_08025 PF02436 Conserved carboxylase domain NYR91_08025 PF00682 HMGL-like NYR91_08030 PF02628 Cytochrome oxidase assembly protein NYR91_08035 PF01040 UbiA prenyltransferase family NYR91_08040 PF00034 Cytochrome c NYR91_08040 PF02790 Cytochrome C oxidase subunit II, transmembrane domain NYR91_08040 PF00116 Cytochrome C oxidase subunit II, periplasmic domain NYR91_08045 PF00115 Cytochrome C and Quinol oxidase polypeptide I NYR91_08050 PF00510 Cytochrome c oxidase subunit III NYR91_08055 PF03626 Prokaryotic Cytochrome C oxidase subunit IV NYR91_08060 PF09678 Cytochrome c oxidase caa3 assembly factor (Caa3_CtaG) NYR91_08065 PF08868 YugN-like family NYR91_08070 PF00571 CBS domain NYR91_08075 PF00188 Cysteine-rich secretory protein family NYR91_08075 PF14504 CAP-associated N-terminal NYR91_08080 PF14071 Putative coat protein NYR91_08085 PF14003 YlbE-like protein NYR91_08090 PF06133 Control of competence regulator ComK, YlbF/YmcA NYR91_08095 PF09902 Uncharacterized protein conserved in bacteria (DUF2129) NYR91_08105 PF01467 Cytidylyltransferase-like NYR91_08110 PF07670 Nucleoside recognition NYR91_08115 PF01734 Patatin-like phospholipase NYR91_08120 PF05362 Lon protease (S16) C-terminal proteolytic domain NYR91_08120 PF13180 PDZ domain NYR91_08125 PF05636 HIGH Nucleotidyl Transferase NYR91_08135 PF02620 Large ribosomal RNA subunit accumulation protein YceD NYR91_08140 PF01783 Ribosomal L32p protein family NYR91_08150 PF00583 Acetyltransferase (GNAT) family NYR91_08155 PF02558 Ketopantoate reductase PanE/ApbA NYR91_08155 PF08546 Ketopantoate reductase PanE/ApbA C terminal NYR91_08160 PF10079 Bacillithiol biosynthesis BshC NYR91_08165 PF02381 MraZ protein, putative antitoxin-like NYR91_08170 PF01795 MraW methylase family NYR91_08180 PF03717 Penicillin-binding Protein dimerisation domain NYR91_08180 PF03793 PASTA domain NYR91_08180 PF00905 Penicillin binding protein transpeptidase domain NYR91_08185 PF03793 PASTA domain NYR91_08185 PF03717 Penicillin-binding Protein dimerisation domain NYR91_08185 PF00905 Penicillin binding protein transpeptidase domain NYR91_08190 PF01225 Mur ligase family, catalytic domain NYR91_08190 PF02875 Mur ligase family, glutamate ligase domain NYR91_08190 PF08245 Mur ligase middle domain NYR91_08195 PF00953 Glycosyl transferase family 4 NYR91_08195 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 NYR91_08200 PF02875 Mur ligase family, glutamate ligase domain NYR91_08200 PF08245 Mur ligase middle domain NYR91_08205 PF01098 Cell cycle protein NYR91_08210 PF04101 Glycosyltransferase family 28 C-terminal domain NYR91_08210 PF03033 Glycosyltransferase family 28 N-terminal domain NYR91_08215 PF01565 FAD binding domain NYR91_08215 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain NYR91_08220 PF08478 POTRA domain, FtsQ-type NYR91_08225 PF05949 Bacterial protein of unknown function (DUF881) NYR91_08230 PF05949 Bacterial protein of unknown function (DUF881) NYR91_08235 PF06947 Protein of unknown function (DUF1290) NYR91_08240 PF02491 SHS2 domain inserted in FTSA NYR91_08245 PF12327 FtsZ family, C-terminal domain NYR91_08245 PF00091 Tubulin/FtsZ family, GTPase domain NYR91_08250 PF05922 Peptidase inhibitor I9 NYR91_08250 PF00082 Subtilase family NYR91_08255 PF03419 Sporulation factor SpoIIGA NYR91_08260 PF04542 Sigma-70 region 2 NYR91_08260 PF04545 Sigma-70, region 4 NYR91_08265 PF04542 Sigma-70 region 2 NYR91_08265 PF04539 Sigma-70 region 3 NYR91_08265 PF04545 Sigma-70, region 4 NYR91_08270 PF00005 ABC transporter NYR91_08275 PF07687 Peptidase dimerisation domain NYR91_08275 PF01546 Peptidase family M20/M25/M40 NYR91_08280 PF05239 PRC-barrel domain NYR91_08285 PF02578 Multi-copper polyphenol oxidoreductase laccase NYR91_08290 PF01168 Alanine racemase, N-terminal domain NYR91_08295 PF04472 Cell division protein SepF NYR91_08300 PF02325 YGGT family NYR91_08305 PF01479 S4 domain NYR91_08305 PF17774 Putative RNA-binding domain in YlmH NYR91_08310 PF05103 DivIVA protein NYR91_08315 PF08264 Anticodon-binding domain of tRNA NYR91_08315 PF00133 tRNA synthetases class I (I, L, M and V) NYR91_08320 PF01258 Prokaryotic dksA/traR C4-type zinc finger NYR91_08325 PF01252 Signal peptidase (SPase) II NYR91_08330 PF01479 S4 domain NYR91_08330 PF00849 RNA pseudouridylate synthase NYR91_08335 PF00156 Phosphoribosyl transferase domain NYR91_08340 PF00860 Permease family NYR91_08345 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain NYR91_08345 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain NYR91_08350 PF01979 Amidohydrolase family NYR91_08355 PF00117 Glutamine amidotransferase class-I NYR91_08355 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain NYR91_08360 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain NYR91_08360 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain NYR91_08360 PF02142 MGS-like domain NYR91_08365 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B NYR91_08365 PF00175 Oxidoreductase NAD-binding domain NYR91_08370 PF01180 Dihydroorotate dehydrogenase NYR91_08375 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family NYR91_08380 PF00156 Phosphoribosyl transferase domain NYR91_08385 PF01507 Phosphoadenosine phosphosulfate reductase family NYR91_08390 PF01384 Phosphate transporter family NYR91_08395 PF14306 PUA-like domain NYR91_08395 PF01747 ATP-sulfurylase NYR91_08405 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases NYR91_08410 PF01903 CbiX NYR91_08420 PF05670 NFACT protein RNA binding domain NYR91_08425 PF00689 Cation transporting ATPase, C-terminus NYR91_08425 PF00690 Cation transporter/ATPase, N-terminus NYR91_08430 PF08340 Domain of unknown function (DUF1732) NYR91_08430 PF03755 YicC-like family, N-terminal region NYR91_08435 PF04025 Domain of unknown function (DUF370) NYR91_08440 PF00625 Guanylate kinase NYR91_08445 PF01192 RNA polymerase Rpb6 NYR91_08450 PF02441 Flavoprotein NYR91_08450 PF04127 DNA / pantothenate metabolism flavoprotein NYR91_08455 PF17764 3′ DNA-binding domain (3′BD) NYR91_08455 PF18074 Primosomal protein N C-terminal domain NYR91_08455 PF18319 PriA DNA helicase Cys-rich region (CRR) domain NYR91_08455 PF04851 Type III restriction enzyme, res subunit NYR91_08455 PF00271 Helicase conserved C-terminal domain NYR91_08460 PF01327 Polypeptide deformylase NYR91_08465 PF02911 Formyl transferase, C-terminal domain NYR91_08465 PF00551 Formyl transferase NYR91_08470 PF01189 16S rRNA methyltransferase RsmB/F NYR91_08470 PF01029 NusB family NYR91_08475 PF04055 Radical SAM superfamily NYR91_08485 PF03793 PASTA domain NYR91_08485 PF00069 Protein kinase domain NYR91_08490 PF03193 RsgA GTPase NYR91_08490 PF16745 RsgA N-terminal domain NYR91_08495 PF00834 Ribulose-phosphate 3 epimerase family NYR91_08500 PF04265 Thiamin pyrophosphokinase, vitamin B1 binding domain NYR91_08500 PF04263 Thiamin pyrophosphokinase, catalytic domain NYR91_08505 PF08183 Stage V sporulation protein family NYR91_08510 PF00830 Ribosomal L28 family NYR91_08515 PF03780 Asp23 family, cell envelope-related function NYR91_08520 PF02734 DAK2 domain NYR91_08520 PF13684 Dihydroxyacetone kinase family NYR91_08525 PF01842 ACT domain NYR91_08525 PF03315 Serine dehydratase beta chain NYR91_08530 PF03313 Serine dehydratase alpha chain NYR91_08535 PF00270 DEAD/DEAH box helicase NYR91_08535 PF00271 Helicase conserved C-terminal domain NYR91_08535 PF17191 RecG wedge domain NYR91_08540 PF03061 Thioesterase superfamily NYR91_08545 PF02504 Fatty acid synthesis protein NYR91_08550 PF00698 Acyl transferase domain NYR91_08560 PF00550 Phosphopantetheine attachment site NYR91_08565 PF14622 Ribonuclease-III-like NYR91_08565 PF00035 Double-stranded RNA binding motif NYR91_08570 PF06470 SMC proteins Flexible Hinge Domain NYR91_08570 PF02463 RecF/RecN/SMC N terminal domain NYR91_08575 PF02881 SRP54-type protein, helical bundle domain NYR91_08575 PF00448 SRP54-type protein, GTPase domain NYR91_08580 PF02369 Bacterial Ig-like domain (group 1) NYR91_08585 PF04297 Putative helix-turn-helix protein, YlxM / p13 like NYR91_08590 PF00448 SRP54-type protein, GTPase domain NYR91_08590 PF02881 SRP54-type protein, helical bundle domain NYR91_08590 PF02978 Signal peptide binding domain NYR91_08595 PF00886 Ribosomal protein S16 NYR91_08605 PF11068 YlqD protein NYR91_08610 PF05239 PRC-barrel domain NYR91_08610 PF01782 RimM N-terminal domain NYR91_08615 PF01746 tRNA (Guanine-1)-methyltransferase NYR91_08620 PF01245 Ribosomal protein L19 NYR91_08625 PF01926 50S ribosome-binding GTPase NYR91_08630 PF01351 Ribonuclease HII NYR91_08640 PF01312 FlhB HrpN YscU SpaS Family NYR91_08645 PF08442 ATP-grasp domain NYR91_08645 PF00549 CoA-ligase NYR91_08650 PF00549 CoA-ligase NYR91_08650 PF02629 CoA binding domain NYR91_08655 PF02481 DNA recombination-mediator protein A NYR91_08660 PF01131 DNA topoisomerase NYR91_08660 PF01751 Toprim domain NYR91_08660 PF01396 Topoisomerase DNA binding C4 zinc finger NYR91_08665 PF01134 Glucose inhibited division protein A NYR91_08670 PF02899 Phage integrase, N-terminal SAM-like domain NYR91_08670 PF00589 Phage integrase family NYR91_08675 PF00227 Proteasome subunit NYR91_08680 PF00004 ATPase family associated with various cellular activities (AAA) NYR91_08680 PF07724 AAA domain (Cdc48 subfamily) NYR91_08680 PF10431 C-terminal, D2-small domain, of ClpB protein NYR91_08685 PF06018 CodY GAF-like domain NYR91_08685 PF08222 CodY helix-turn-helix domain NYR91_08690 PF00460 Flagella basal body rod protein NYR91_08695 PF00460 Flagella basal body rod protein NYR91_08695 PF06429 Flagellar basal body rod FlgEFG protein C-terminal NYR91_08700 PF02049 Flagellar hook-basal body complex protein FliE NYR91_08705 PF08345 Flagellar M-ring protein C-terminal NYR91_08705 PF01514 Secretory protein of YscJ/FliF family NYR91_08710 PF14841 FliG middle domain NYR91_08710 PF14842 FliG N-terminal domain NYR91_08710 PF01706 FliG C-terminal domain NYR91_08715 PF02108 Flagellar assembly protein FliH NYR91_08720 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain NYR91_08720 PF02874 ATP synthase alpha/beta family, beta-barrel domain NYR91_08720 PF18269 T3SS EscN ATPase C-terminal domain NYR91_08725 PF02050 Flagellar FliJ protein NYR91_08730 PF03448 MgtE intracellular N domain NYR91_08735 PF02120 Flagellar hook-length control protein FliK NYR91_08740 PF03963 Flagellar hook capping protein - N-terminal region NYR91_08745 PF06429 Flagellar basal body rod FlgEFG protein C-terminal NYR91_08745 PF00460 Flagella basal body rod protein NYR91_08750 PF06289 Flagellar and Swarming motility proteins NYR91_08755 PF03748 Flagellar basal body-associated protein FliL NYR91_08760 PF02154 Flagellar motor switch protein FliM NYR91_08760 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term NYR91_08765 PF04509 CheC-like family NYR91_08765 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term NYR91_08770 PF00072 Response regulator receiver domain NYR91_08775 PF04347 Flagellar biosynthesis protein, FliO NYR91_08780 PF00813 FliP family NYR91_08785 PF01313 Bacterial export proteins, family 3 NYR91_08790 PF01311 Bacterial export proteins, family 1 NYR91_08795 PF01312 FlhB HrpN YscU SpaS Family NYR91_08800 PF00771 FHIPEP family NYR91_08805 PF00448 SRP54-type protein, GTPase domain NYR91_08810 PF10609 NUBPL iron-transfer P-loop NTPase NYR91_08815 PF01339 CheB methylesterase NYR91_08815 PF00072 Response regulator receiver domain NYR91_08820 PF01627 Hpt domain NYR91_08820 PF07194 P2 response regulator binding domain NYR91_08820 PF01584 CheW-like domain NYR91_08820 PF02895 Signal transducing histidine kinase, homodimeric domain NYR91_08820 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NYR91_08825 PF01584 CheW-like domain NYR91_08830 PF04509 CheC-like family NYR91_08835 PF03975 CheD chemotactic sensory transduction NYR91_08840 PF04542 Sigma-70 region 2 NYR91_08840 PF04539 Sigma-70 region 3 NYR91_08840 PF04545 Sigma-70, region 4 NYR91_08850 PF00318 Ribosomal protein S2 NYR91_08855 PF00889 Elongation factor TS NYR91_08860 PF00696 Amino acid kinase family NYR91_08865 PF01765 Ribosome recycling factor NYR91_08870 PF01255 Putative undecaprenyl diphosphate synthase NYR91_08880 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain NYR91_08880 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase NYR91_08880 PF13288 DXP reductoisomerase C-terminal domain NYR91_08885 PF17820 PDZ domain NYR91_08885 PF02163 Peptidase family M50 NYR91_08890 PF03129 Anticodon binding domain NYR91_08890 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) NYR91_08890 PF04073 Aminoacyl-tRNA editing domain NYR91_08895 PF14480 DNA polymerase III polC-type N-terminus I NYR91_08895 PF07733 Bacterial DNA polymerase III alpha NTPase domain NYR91_08895 PF17657 Bacterial DNA polymerase III alpha subunit finger domain NYR91_08895 PF14579 Helix-hairpin-helix motif NYR91_08895 PF02811 PHP domain NYR91_08895 PF00929 Exonuclease NYR91_08895 PF11490 DNA polymerase III polC-type N-terminus II NYR91_08900 PF02576 RimP N-terminal domain NYR91_08900 PF17384 RimP C-terminal SH3 domain NYR91_08905 PF00575 S1 RNA binding domain NYR91_08905 PF08529 NusA N-terminal domain NYR91_08905 PF13184 NusA-like KH domain NYR91_08910 PF04296 Protein of unknown function (DUF448) NYR91_08915 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family NYR91_08920 PF00009 Elongation factor Tu GTP binding domain NYR91_08920 PF11987 Translation-initiation factor 2 NYR91_08920 PF04760 Translation initiation factor IF-2, N-terminal region NYR91_08925 PF04456 Protein of unknown function (DUF503) NYR91_08930 PF02033 Ribosome-binding factor A NYR91_08935 PF16198 tRNA pseudouridylate synthase B C-terminal domain NYR91_08935 PF01509 TruB family pseudouridylate synthase (N terminal domain) NYR91_08940 PF06574 FAD synthetase NYR91_08940 PF01687 Riboflavin kinase NYR91_08945 PF00312 Ribosomal protein S15 NYR91_08950 PF00013 KH domain NYR91_08950 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain NYR91_08950 PF01138 3' exoribonuclease family, domain 1 NYR91_08950 PF03725 3' exoribonuclease family, domain 2 NYR91_08950 PF00575 S1 RNA binding domain NYR91_08955 PF01522 Polysaccharide deacetylase NYR91_08960 PF00675 Insulinase (Peptidase family M16) NYR91_08960 PF05193 Peptidase M16 inactive domain NYR91_08965 PF05239 PRC-barrel domain NYR91_08970 PF16924 Dipicolinate synthase subunit A N-terminal domain NYR91_08970 PF01262 Alanine dehydrogenase/PNT, C-terminal domain NYR91_08975 PF02441 Flavoprotein NYR91_08980 PF01118 Semialdehyde dehydrogenase, NAD binding domain NYR91_08980 PF02774 Semialdehyde dehydrogenase, dimerisation domain NYR91_08985 PF00696 Amino acid kinase family NYR91_08985 PF13840 ACT domain NYR91_08990 PF00701 Dihydrodipicolinate synthetase family NYR91_08995 PF17770 Ribonuclease J C-terminal domain NYR91_08995 PF00753 Metallo-beta-lactamase superfamily NYR91_08995 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain NYR91_09000 PF00574 Clp protease NYR91_09005 PF14035 YlzJ-like protein NYR91_09010 PF17854 FtsK alpha domain NYR91_09010 PF09397 Ftsk gamma domain NYR91_09010 PF01580 FtsK/SpoIIIE family NYR91_09015 PF00392 Bacterial regulatory proteins, gntR family NYR91_09015 PF07702 UTRA domain NYR91_09020 PF07690 Major Facilitator Superfamily NYR91_09025 PF05193 Peptidase M16 inactive domain NYR91_09030 PF05193 Peptidase M16 inactive domain NYR91_09030 PF00675 Insulinase (Peptidase family M16) NYR91_09040 PF11588 Protein of unknown function (DUF3243) NYR91_09045 PF11868 Protein of unknown function (DUF3388) NYR91_09050 PF13464 Domain of unknown function (DUF4115) NYR91_09055 PF01066 CDP-alcohol phosphatidyltransferase NYR91_09060 PF18146 Damage-inducible protein CinA KH domain NYR91_09060 PF00994 Probable molybdopterin binding domain NYR91_09060 PF02464 Competence-damaged protein NYR91_09065 PF00154 recA bacterial DNA recombination protein NYR91_09070 PF00144 Beta-lactamase NYR91_09075 PF01966 HD domain NYR91_09075 PF12072 Domain of unknown function (DUF3552) NYR91_09075 PF00013 KH domain NYR91_09080 PF13277 YmdB-like protein NYR91_09085 PF04232 Stage V sporulation protein S (SpoVS) NYR91_09090 PF08240 Alcohol dehydrogenase GroES-like domain NYR91_09090 PF00107 Zinc-binding dehydrogenase NYR91_09095 PF00155 Aminotransferase class I and II NYR91_09100 PF04055 Radical SAM superfamily NYR91_09100 PF00919 Uncharacterized protein family UPF0004 NYR91_09100 PF01938 TRAM domain NYR91_09105 PF06133 Control of competence regulator ComK, YlbF/YmcA NYR91_09110 PF10628 Outer spore coat protein E (CotE) NYR91_09115 PF01624 MutS domain I NYR91_09115 PF05188 MutS domain II NYR91_09115 PF05192 MutS domain III NYR91_09115 PF05190 MutS family domain IV NYR91_09115 PF00488 MutS domain V NYR91_09120 PF01119 DNA mismatch repair protein, C-terminal domain NYR91_09120 PF08676 MutL C terminal dimerisation domain NYR91_09125 PF14184 Regulatory protein YrvL NYR91_09135 PF13977 BetI-type transcriptional repressor, C-terminal NYR91_09135 PF00440 Bacterial regulatory proteins, tetR family NYR91_09140 PF00753 Metallo-beta-lactamase superfamily NYR91_09150 PF00698 Acyl transferase domain NYR91_09155 PF00698 Acyl transferase domain NYR91_09165 PF00550 Phosphopantetheine attachment site NYR91_09170 PF00109 Beta-ketoacyl synthase, N-terminal domain NYR91_09170 PF02801 Beta-ketoacyl synthase, C-terminal domain NYR91_09175 PF08540 Hydroxymethylglutaryl-coenzyme A synthase C terminal NYR91_09175 PF01154 Hydroxymethylglutaryl-coenzyme A synthase N terminal NYR91_09180 PF00378 Enoyl-CoA hydratase/isomerase NYR91_09185 PF00378 Enoyl-CoA hydratase/isomerase NYR91_09190 PF13193 AMP-binding enzyme C-terminal domain NYR91_09190 PF00501 AMP-binding enzyme NYR91_09190 PF14765 Polyketide synthase dehydratase NYR91_09190 PF00550 Phosphopantetheine attachment site NYR91_09190 PF00109 Beta-ketoacyl synthase, N-terminal domain NYR91_09190 PF02801 Beta-ketoacyl synthase, C-terminal domain NYR91_09190 PF16197 Ketoacyl-synthetase C-terminal extension NYR91_09190 PF00668 Condensation domain NYR91_09190 PF08659 KR domain NYR91_09195 PF16197 Ketoacyl-synthetase C-terminal extension NYR91_09195 PF00109 Beta-ketoacyl synthase, N-terminal domain NYR91_09195 PF02801 Beta-ketoacyl synthase, C-terminal domain NYR91_09195 PF00550 Phosphopantetheine attachment site NYR91_09195 PF14765 Polyketide synthase dehydratase NYR91_09195 PF08659 KR domain NYR91_09200 PF00109 Beta-ketoacyl synthase, N-terminal domain NYR91_09200 PF02801 Beta-ketoacyl synthase, C-terminal domain NYR91_09200 PF08659 KR domain NYR91_09200 PF08242 Methyltransferase domain NYR91_09200 PF00550 Phosphopantetheine attachment site NYR91_09200 PF14765 Polyketide synthase dehydratase NYR91_09200 PF16197 Ketoacyl-synthetase C-terminal extension NYR91_09205 PF00668 Condensation domain NYR91_09205 PF13193 AMP-binding enzyme C-terminal domain NYR91_09205 PF00501 AMP-binding enzyme NYR91_09205 PF02801 Beta-ketoacyl synthase, C-terminal domain NYR91_09205 PF08659 KR domain NYR91_09205 PF00550 Phosphopantetheine attachment site NYR91_09205 PF14765 Polyketide synthase dehydratase NYR91_09205 PF16197 Ketoacyl-synthetase C-terminal extension NYR91_09205 PF00109 Beta-ketoacyl synthase, N-terminal domain NYR91_09210 PF00550 Phosphopantetheine attachment site NYR91_09210 PF00975 Thioesterase domain NYR91_09210 PF14765 Polyketide synthase dehydratase NYR91_09210 PF16197 Ketoacyl-synthetase C-terminal extension NYR91_09210 PF08242 Methyltransferase domain NYR91_09210 PF02801 Beta-ketoacyl synthase, C-terminal domain NYR91_09210 PF00109 Beta-ketoacyl synthase, N-terminal domain NYR91_09215 PF00067 Cytochrome P450 NYR91_09230 PF00082 Subtilase family NYR91_09240 PF05908 Poly-gamma-glutamate hydrolase NYR91_09245 PF02566 OsmC-like protein NYR91_09250 PF00893 Small Multidrug Resistance protein NYR91_09255 PF00893 Small Multidrug Resistance protein NYR91_09265 PF12788 YmaF family NYR91_09275 PF17209 Hfq protein NYR91_09280 PF14157 YmzC-like protein NYR91_09290 PF07972 NrdI Flavodoxin like NYR91_09295 PF02867 Ribonucleotide reductase, barrel domain NYR91_09295 PF08343 Ribonucleotide reductase N-terminal NYR91_09295 PF00317 Ribonucleotide reductase, all-alpha domain NYR91_09300 PF00268 Ribonucleotide reductase, small chain NYR91_09310 PF01520 N-acetylmuramoyl-L-alanine amidase NYR91_09310 PF05036 Sporulation related domain NYR91_09315 PF00004 ATPase family associated with various cellular activities (AAA) NYR91_09315 PF17866 AAA lid domain NYR91_09320 PF16360 GTP-binding GTPase Middle Region NYR91_09320 PF13167 GTP-binding GTPase N-terminal NYR91_09320 PF01926 50S ribosome-binding GTPase NYR91_09325 PF06838 Methionine gamma-lyase NYR91_09330 PF13411 MerR HTH family regulatory protein NYR91_09335 PF03951 Glutamine synthetase, beta-Grasp domain NYR91_09335 PF00120 Glutamine synthetase, catalytic domain NYR91_09345 PF03009 Glycerophosphoryl diester phosphodiesterase family NYR91_09350 PF05105 Bacteriophage holin family NYR91_09400 PF13302 Acetyltransferase (GNAT) domain NYR91_09410 PF13021 Domain of unknown function (DUF3885) NYR91_09440 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain NYR91_09440 PF04616 Glycosyl hydrolases family 43 NYR91_09445 PF00480 ROK family NYR91_09450 PF01261 Xylose isomerase-like TIM barrel NYR91_09455 PF02782 FGGY family of carbohydrate kinases, C-terminal domain NYR91_09455 PF00370 FGGY family of carbohydrate kinases, N-terminal domain NYR91_09465 PF00565 Staphylococcal nuclease homologue NYR91_09470 PF00083 Sugar (and other) transporter NYR91_09475 PF00842 Alanine racemase, C-terminal domain NYR91_09475 PF01168 Alanine racemase, N-terminal domain NYR91_09485 PF10903 Protein of unknown function (DUF2691) NYR91_09490 PF00692 dUTPase NYR91_09505 PF00303 Thymidylate synthase NYR91_09515 PF15493 Domain of unknown function, YrpD NYR91_09520 PF14037 YoqO-like protein NYR91_09530 PF02416 mttA/Hcf106 family NYR91_09545 PF08327 Activator of Hsp90 ATPase homolog 1-like protein NYR91_09565 PF03845 Spore germination protein NYR91_09580 PF13761 Domain of unknown function (DUF4166) NYR91_09585 PF14158 YndJ-like protein NYR91_09595 PF05908 Poly-gamma-glutamate hydrolase NYR91_09600 PF10710 Protein of unknown function (DUF2512) NYR91_09605 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily NYR91_09615 PF01726 LexA DNA binding domain NYR91_09615 PF00717 Peptidase S24-like NYR91_09620 PF01476 LysM domain NYR91_09625 PF00239 Resolvase, N terminal domain NYR91_09630 PF05979 Bacterial protein of unknown function (DUF896) NYR91_09635 PF02780 Transketolase, C-terminal domain NYR91_09635 PF00456 Transketolase, thiamine diphosphate binding domain NYR91_09635 PF02779 Transketolase, pyrimidine binding domain NYR91_09640 PF10747 Sporulation inhibitor of replication protein SirA NYR91_09645 PF03672 Uncharacterised protein family (UPF0154) NYR91_09650 PF09388 Spo0E like sporulation regulatory protein NYR91_09655 PF02683 Cytochrome C biogenesis protein transmembrane region NYR91_09660 PF00072 Response regulator receiver domain NYR91_09665 PF07301 Protein of unknown function (DUF1453) NYR91_09670 PF11084 Protein of unknown function (DUF2621) NYR91_09680 PF08179 Small acid-soluble spore protein P family NYR91_09690 PF00330 Aconitase family (aconitate hydratase) NYR91_09690 PF00694 Aconitase C-terminal domain NYR91_09695 PF00578 AhpC/TSA family NYR91_09700 PF13040 Fur-regulated basic protein B NYR91_09705 PF08177 Small acid-soluble spore protein N family NYR91_09715 PF03061 Thioesterase superfamily NYR91_09725 PF01521 Iron-sulphur cluster biosynthesis NYR91_09730 PF02660 Glycerol-3-phosphate acyltransferase NYR91_09735 PF13380 CoA binding domain NYR91_09740 PF00204 DNA gyrase B NYR91_09740 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NYR91_09740 PF01751 Toprim domain NYR91_09740 PF00986 DNA gyrase B subunit, carboxyl terminus NYR91_09745 PF00521 DNA gyrase/topoisomerase IV, subunit A NYR91_09745 PF03989 DNA gyrase C-terminal domain, beta-propeller NYR91_09760 PF01235 Sodium:alanine symporter family NYR91_09765 PF00942 Cellulose binding domain NYR91_09765 PF00150 Cellulase (glycosyl hydrolase family 5) NYR91_09770 PF17452 Uncharacterized YnfE-like NYR91_09775 PF17189 Glycosyl hydrolase family 30 beta sandwich domain NYR91_09780 PF03422 Carbohydrate binding module (family 6) NYR91_09780 PF04616 Glycosyl hydrolases family 43 NYR91_09785 PF04138 GtrA-like protein NYR91_09790 PF00483 Nucleotidyl transferase NYR91_09795 PF09335 SNARE associated Golgi protein NYR91_09805 PF01039 Carboxyl transferase domain NYR91_09810 PF00378 Enoyl-CoA hydratase/isomerase NYR91_09815 PF00682 HMGL-like NYR91_09820 PF00364 Biotin-requiring enzyme NYR91_09825 PF00289 Biotin carboxylase, N-terminal domain NYR91_09825 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain NYR91_09825 PF02785 Biotin carboxylase C-terminal domain NYR91_09830 PF00501 AMP-binding enzyme NYR91_09830 PF13193 AMP-binding enzyme C-terminal domain NYR91_09835 PF00441 Acyl-CoA dehydrogenase, C-terminal domain NYR91_09835 PF02770 Acyl-CoA dehydrogenase, middle domain NYR91_09835 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NYR91_09840 PF17329 Family of unknown function (DUF5367) NYR91_09850 PF17932 Tetracyclin repressor-like, C-terminal domain NYR91_09850 PF00440 Bacterial regulatory proteins, tetR family NYR91_09860 PF02638 Glycosyl hydrolase-like 10 NYR91_09865 PF07098 Protein of unknown function (DUF1360) NYR91_09870 PF00975 Thioesterase domain NYR91_09870 PF00550 Phosphopantetheine attachment site NYR91_09870 PF13193 AMP-binding enzyme C-terminal domain NYR91_09870 PF00501 AMP-binding enzyme NYR91_09870 PF00668 Condensation domain NYR91_09875 PF00501 AMP-binding enzyme NYR91_09875 PF13193 AMP-binding enzyme C-terminal domain NYR91_09875 PF00668 Condensation domain NYR91_09875 PF00550 Phosphopantetheine attachment site NYR91_09880 PF13193 AMP-binding enzyme C-terminal domain NYR91_09880 PF00501 AMP-binding enzyme NYR91_09880 PF00550 Phosphopantetheine attachment site NYR91_09880 PF00668 Condensation domain NYR91_09885 PF00550 Phosphopantetheine attachment site NYR91_09885 PF13193 AMP-binding enzyme C-terminal domain NYR91_09885 PF00501 AMP-binding enzyme NYR91_09885 PF00668 Condensation domain NYR91_09890 PF00501 AMP-binding enzyme NYR91_09890 PF13193 AMP-binding enzyme C-terminal domain NYR91_09890 PF00668 Condensation domain NYR91_09890 PF00550 Phosphopantetheine attachment site NYR91_09895 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family NYR91_09900 PF01263 Aldose 1-epimerase NYR91_09905 PF01554 MatE NYR91_09910 PF16800 IseA DL-endopeptidase inhibitor NYR91_09920 PF00589 Phage integrase family NYR91_09925 PF12728 Helix-turn-helix domain NYR91_09935 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NYR91_09935 PF03466 LysR substrate binding domain NYR91_09940 PF00107 Zinc-binding dehydrogenase NYR91_09940 PF08240 Alcohol dehydrogenase GroES-like domain NYR91_09945 PF07992 Pyridine nucleotide-disulphide oxidoreductase NYR91_09945 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster NYR91_09950 PF04898 Glutamate synthase central domain NYR91_09950 PF01645 Conserved region in glutamate synthase NYR91_09950 PF00310 Glutamine amidotransferases class-II NYR91_09950 PF01493 GXGXG motif NYR91_09955 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NYR91_09955 PF03466 LysR substrate binding domain NYR91_09960 PF00696 Amino acid kinase family NYR91_09960 PF01472 PUA domain NYR91_09965 PF03807 NADP oxidoreductase coenzyme F420-dependent NYR91_09965 PF14748 Pyrroline-5-carboxylate reductase dimerisation NYR91_09970 PF02334 Replication terminator protein NYR91_09975 PF00106 short chain dehydrogenase NYR91_09980 PF06103 Bacterial protein of unknown function (DUF948) NYR91_09990 PF13302 Acetyltransferase (GNAT) domain NYR91_09995 PF07690 Major Facilitator Superfamily NYR91_10000 PF02782 FGGY family of carbohydrate kinases, C-terminal domain NYR91_10000 PF00370 FGGY family of carbohydrate kinases, N-terminal domain NYR91_10005 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain NYR91_10005 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain NYR91_10010 PF04879 Molybdopterin oxidoreductase Fe4S4 domain NYR91_10010 PF00384 Molybdopterin oxidoreductase NYR91_10010 PF01568 Molydopterin dinucleotide binding domain NYR91_10020 PF01408 Oxidoreductase family, NAD-binding Rossmann fold NYR91_10020 PF02894 Oxidoreductase family, C-terminal alpha/beta domain NYR91_10025 PF01261 Xylose isomerase-like TIM barrel NYR91_10030 PF00356 Bacterial regulatory proteins, lacI family NYR91_10045 PF13217 Protein of unknown function (DUF4025) NYR91_10050 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NYR91_10050 PF00672 HAMP domain NYR91_10050 PF05227 CHASE3 domain NYR91_10055 PF03241 4-hydroxyphenylacetate 3-hydroxylase C terminal NYR91_10055 PF11794 4-hydroxyphenylacetate 3-hydroxylase N terminal NYR91_10060 PF03330 Lytic transglycolase NYR91_10065 PF06912 Protein of unknown function (DUF1275) NYR91_10070 PF00544 Pectate lyase NYR91_10075 PF02586 SOS response associated peptidase (SRAP) NYR91_10085 PF00190 Cupin NYR91_10090 PF16302 Domain of unknown function (DUF4944) NYR91_10115 PF04294 VanW like protein NYR91_10120 PF11188 Protein of unknown function (DUF2975) NYR91_10130 PF05675 Protein of unknown function (DUF817) NYR91_10135 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NYR91_10135 PF03466 LysR substrate binding domain NYR91_10140 PF00892 EamA-like transporter family NYR91_10150 PF01965 DJ-1/PfpI family NYR91_10165 PF11518 Protein of unknown function (DUF3221) NYR91_10170 PF00391 PEP-utilising enzyme, mobile domain NYR91_10170 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain NYR91_10175 PF00457 Glycosyl hydrolases family 11 NYR91_10180 PF05154 TM2 domain NYR91_10210 PF02586 SOS response associated peptidase (SRAP) NYR91_10230 PF03466 LysR substrate binding domain NYR91_10230 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NYR91_10255 PF14037 YoqO-like protein NYR91_10265 PF18801 response regulator aspartate phosphatase H, N terminal NYR91_10285 PF09346 SMI1 / KNR4 family (SUKH-1) NYR91_10290 PF01593 Flavin containing amine oxidoreductase NYR91_10295 PF12708 Pectate lyase superfamily protein NYR91_10295 PF11962 Peptidase_G2, IMC autoproteolytic cleavage domain NYR91_10300 PF01588 Putative tRNA binding domain NYR91_10305 PF07883 Cupin domain NYR91_10305 PF12833 Helix-turn-helix domain NYR91_10310 PF00583 Acetyltransferase (GNAT) family NYR91_10315 PF00440 Bacterial regulatory proteins, tetR family NYR91_10315 PF13305 Tetracyclin repressor-like, C-terminal domain NYR91_10320 PF00753 Metallo-beta-lactamase superfamily NYR91_10325 PF06445 GyrI-like small molecule binding domain NYR91_10330 PF08279 HTH domain NYR91_10330 PF13280 WYL domain NYR91_10340 PF01022 Bacterial regulatory protein, arsR family NYR91_10350 PF04238 Protein of unknown function (DUF420) NYR91_10355 PF18846 Bacterial archaeo-eukaryotic release factor family 5 NYR91_10365 PF17676 LD-carboxypeptidase C-terminal domain NYR91_10365 PF02016 LD-carboxypeptidase N-terminal domain NYR91_10370 PF00487 Fatty acid desaturase NYR91_10375 PF07730 Histidine kinase NYR91_10380 PF00196 Bacterial regulatory proteins, luxR family NYR91_10380 PF00072 Response regulator receiver domain NYR91_10385 PF06725 3D domain NYR91_10385 PF01476 LysM domain NYR91_10390 PF09382 RQC domain NYR91_10390 PF16124 RecQ zinc-binding NYR91_10390 PF00270 DEAD/DEAH box helicase NYR91_10390 PF00271 Helicase conserved C-terminal domain NYR91_10390 PF00570 HRDC domain NYR91_10400 PF02525 Flavodoxin-like fold NYR91_10405 PF01258 Prokaryotic dksA/traR C4-type zinc finger NYR91_10420 PF00011 Hsp20/alpha crystallin family NYR91_10435 PF08000 Bacterial PH domain NYR91_10445 PF00171 Aldehyde dehydrogenase family NYR91_10450 PF13243 Squalene-hopene cyclase C-terminal domain NYR91_10450 PF13249 Squalene-hopene cyclase N-terminal domain NYR91_10455 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain NYR91_10455 PF02777 Iron/manganese superoxide dismutases, C-terminal domain NYR91_10460 PF00209 Sodium:neurotransmitter symporter family NYR91_10465 PF01758 Sodium Bile acid symporter family NYR91_10470 PF02817 e3 binding domain NYR91_10470 PF00364 Biotin-requiring enzyme NYR91_10470 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) NYR91_10475 PF02779 Transketolase, pyrimidine binding domain NYR91_10475 PF16870 2-oxoglutarate dehydrogenase C-terminal NYR91_10475 PF00676 Dehydrogenase E1 component NYR91_10480 PF00092 von Willebrand factor type A domain NYR91_10485 PF07728 AAA domain (dynein-related subfamily) NYR91_10490 PF00080 Copper/zinc superoxide dismutase (SODC) NYR91_10490 PF13627 Prokaryotic lipoprotein-attachment site NYR91_10495 PF00877 NlpC/P60 family NYR91_10495 PF01476 LysM domain NYR91_10500 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase NYR91_10505 PF10372 Bacterial membrane-spanning protein N-terminus NYR91_10505 PF02457 DisA bacterial checkpoint controller nucleotide-binding NYR91_10510 PF01554 MatE NYR91_10515 PF01740 STAS domain NYR91_10520 PF02585 GlcNAc-PI de-N-acetylase NYR91_10525 PF08830 Protein of unknown function (DUF1806) NYR91_10535 PF00892 EamA-like transporter family NYR91_10550 PF02447 GntP family permease NYR91_10555 PF14552 Tautomerase enzyme NYR91_10560 PF01638 HxlR-like helix-turn-helix NYR91_10565 PF00881 Nitroreductase family NYR91_10570 PF01738 Dienelactone hydrolase family NYR91_10575 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily NYR91_10580 PF11755 Protein of unknown function (DUF3311) NYR91_10585 PF00474 Sodium:solute symporter family NYR91_10590 PF03572 Peptidase family S41 NYR91_10590 PF17820 PDZ domain NYR91_10590 PF01471 Putative peptidoglycan binding domain NYR91_10595 PF08241 Methyltransferase domain NYR91_10605 PF02557 D-alanyl-D-alanine carboxypeptidase NYR91_10610 PF01048 Phosphorylase superfamily NYR91_10620 PF14191 YodL-like NYR91_10625 PF01569 PAP2 superfamily NYR91_10630 PF14162 YozD-like protein NYR91_10645 PF06855 YozE SAM-like fold NYR91_10650 PF14122 YokU-like protein, putative antitoxin NYR91_10655 PF12544 Lysine-2,3-aminomutase NYR91_10660 PF00583 Acetyltransferase (GNAT) family NYR91_10665 PF01546 Peptidase family M20/M25/M40 NYR91_10665 PF07687 Peptidase dimerisation domain NYR91_10670 PF01144 Coenzyme A transferase NYR91_10675 PF01144 Coenzyme A transferase NYR91_10680 PF00202 Aminotransferase class-III NYR91_10695 PF00583 Acetyltransferase (GNAT) family NYR91_10700 PF00535 Glycosyl transferase family 2 NYR91_10715 PF12996 DUF based on E. rectale Gene description (DUF3880) NYR91_10720 PF02333 Phytase NYR91_10725 PF02719 Polysaccharide biosynthesis protein NYR91_10730 PF01641 SelR domain NYR91_10735 PF01625 Peptide methionine sulfoxide reductase NYR91_10740 PF01047 MarR family NYR91_10745 PF01554 MatE NYR91_10750 PF17431 Uncharacterized YmpT-like NYR91_10755 PF09911 Uncharacterized protein conserved in bacteria (DUF2140) NYR91_10760 PF13472 GDSL-like Lipase/Acylhydrolase family NYR91_10765 PF02630 SCO1/SenC NYR91_10770 PF10751 Protein of unknown function (DUF2535) NYR91_10775 PF00291 Pyridoxal-phosphate dependent enzyme NYR91_10775 PF00585 C-terminal regulatory domain of Threonine dehydratase NYR91_10780 PF08461 Ribonuclease R winged-helix domain NYR91_10780 PF00158 Sigma-54 interaction domain NYR91_10785 PF03006 Haemolysin-III related NYR91_10795 PF00186 Dihydrofolate reductase NYR91_10800 PF04608 Phosphatidylglycerophosphatase A NYR91_10805 PF14005 YpjP-like protein NYR91_10810 PF04445 Putative SAM-dependent methyltransferase NYR91_10815 PF06491 Disulphide isomerase NYR91_10820 PF00920 Dehydratase family NYR91_10825 PF13769 Virulence factor NYR91_10825 PF08712 Scaffold protein Nfu/NifU N terminal NYR91_10830 PF01966 HD domain NYR91_10835 PF00255 Glutathione peroxidase NYR91_10840 PF04204 Homoserine O-succinyltransferase NYR91_10845 PF06925 Monogalactosyldiacylglycerol (MGDG) synthase NYR91_10845 PF00534 Glycosyl transferases group 1 NYR91_10855 PF00313 'Cold-shock' DNA-binding domain NYR91_10865 PF10819 Protein of unknown function (DUF2564) NYR91_10870 PF10782 Zinc-finger NYR91_10875 PF13456 Reverse transcriptase-like NYR91_10880 PF02592 Putative vitamin uptake transporter NYR91_10885 PF13456 Reverse transcriptase-like NYR91_10895 PF01367 5'-3' exonuclease, C-terminal SAM fold NYR91_10895 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain NYR91_10905 PF10752 Protein of unknown function (DUF2533) NYR91_10910 PF00350 Dynamin family NYR91_10920 PF04140 Isoprenylcysteine carboxyl methyltransferase (ICMT) family NYR91_10925 PF02797 Chalcone and stilbene synthases, C-terminal domain NYR91_10925 PF00195 Chalcone and stilbene synthases, N-terminal domain NYR91_10930 PF00860 Permease family NYR91_10935 PF00156 Phosphoribosyl transferase domain NYR91_10940 PF02074 Carboxypeptidase Taq (M32) metallopeptidase NYR91_10945 PF03812 2-keto-3-deoxygluconate permease NYR91_10950 PF01081 KDPG and KHG aldolase NYR91_10955 PF00294 pfkB family carbohydrate kinase NYR91_10960 PF00356 Bacterial regulatory proteins, lacI family NYR91_10965 PF04962 KduI/IolB family NYR91_10975 PF13307 Helicase C-terminal domain NYR91_10985 PF14139 YpzG-like protein NYR91_10990 PF02926 THUMP domain NYR91_10990 PF01170 Putative RNA methylase family UPF0020 NYR91_11000 PF05103 DivIVA protein NYR91_11005 PF06908 YspA SLOG family NYR91_11010 PF11122 Inner spore coat protein D NYR91_11020 PF13482 RNase_H superfamily NYR91_11025 PF00270 DEAD/DEAH box helicase NYR91_11025 PF09369 Domain of unknown function (DUF1998) NYR91_11025 PF00271 Helicase conserved C-terminal domain NYR91_11030 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 NYR91_11040 PF14179 YppG-like protein NYR91_11045 PF14178 YppF-like protein NYR91_11050 PF08807 Bacterial domain of unknown function (DUF1798) NYR91_11055 PF17522 Family of unknown function (DUF5446) NYR91_11065 PF10720 Protein of unknown function (DUF2515) NYR91_11070 PF03838 Recombination protein U NYR91_11075 PF00905 Penicillin binding protein transpeptidase domain NYR91_11075 PF00912 Transglycosylase NYR91_11085 PF10576 Iron-sulfur binding domain of endonuclease III NYR91_11085 PF00730 HhH-GPD superfamily base excision DNA repair protein NYR91_11085 PF00633 Helix-hairpin-helix motif NYR91_11090 PF07261 Replication initiation and membrane attachment NYR91_11095 PF01336 OB-fold nucleic acid binding domain NYR91_11095 PF00152 tRNA synthetases class II (D, K and N) NYR91_11100 PF00155 Aminotransferase class I and II NYR91_11105 PF03413 Peptidase propeptide and YPEB domain NYR91_11105 PF17881 Domain of unknown function (DUF5590) NYR91_11110 PF14084 Protein of unknown function (DUF4264) NYR91_11115 PF00929 Exonuclease NYR91_11115 PF04851 Type III restriction enzyme, res subunit NYR91_11115 PF13307 Helicase C-terminal domain NYR91_11120 PF02261 Aspartate decarboxylase NYR91_11125 PF02569 Pantoate-beta-alanine ligase NYR91_11130 PF02548 Ketopantoate hydroxymethyltransferase NYR91_11135 PF08279 HTH domain NYR91_11135 PF03099 Biotin/lipoate A/B protein ligase family NYR91_11135 PF02237 Biotin protein ligase C terminal domain NYR91_11140 PF13735 tRNA nucleotidyltransferase domain 2 putative NYR91_11140 PF01743 Poly A polymerase head domain NYR91_11140 PF12627 Probable RNA and SrmB- binding site of polymerase A NYR91_11145 PF00534 Glycosyl transferases group 1 NYR91_11145 PF13439 Glycosyltransferase Family 4 NYR91_11150 PF02585 GlcNAc-PI de-N-acetylase NYR91_11155 PF02142 MGS-like domain NYR91_11160 PF01113 Dihydrodipicolinate reductase, N-terminus NYR91_11160 PF05173 Dihydrodipicolinate reductase, C-terminus NYR91_11165 PF03819 MazG nucleotide pyrophosphohydrolase domain NYR91_11170 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 NYR91_11170 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) NYR91_11175 PF09577 Sporulation protein YpjB (SpoYpjB) NYR91_11180 PF07187 Protein of unknown function (DUF1405) NYR91_11185 PF13442 Cytochrome C oxidase, cbb3-type, subunit III NYR91_11185 PF00032 Cytochrome b(C-terminal)/b6/petD NYR91_11190 PF00033 Cytochrome b/b6/petB NYR91_11195 PF00355 Rieske [2Fe-2S] domain NYR91_11200 PF10673 Protein of unknown function (DUF2487) NYR91_11205 PF08858 IDEAL domain NYR91_11205 PF08864 UPF0302 domain NYR91_11215 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) NYR91_11220 PF02153 Prephenate dehydrogenase NYR91_11220 PF01842 ACT domain NYR91_11225 PF00155 Aminotransferase class I and II NYR91_11230 PF00290 Tryptophan synthase alpha chain NYR91_11235 PF00291 Pyridoxal-phosphate dependent enzyme NYR91_11240 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase NYR91_11245 PF00218 Indole-3-glycerol phosphate synthase NYR91_11250 PF00591 Glycosyl transferase family, a/b domain NYR91_11250 PF02885 Glycosyl transferase family, helical bundle domain NYR91_11255 PF00425 chorismate binding enzyme NYR91_11255 PF04715 Anthranilate synthase component I, N terminal region NYR91_11260 PF07736 Chorismate mutase type I NYR91_11265 PF01761 3-dehydroquinate synthase NYR91_11270 PF01264 Chorismate synthase NYR91_11275 PF03705 CheR methyltransferase, all-alpha domain NYR91_11275 PF01739 CheR methyltransferase, SAM binding domain NYR91_11280 PF00334 Nucleoside diphosphate kinase NYR91_11285 PF00348 Polyprenyl synthetase NYR91_11290 PF01209 ubiE/COQ5 methyltransferase family NYR91_11295 PF07307 Heptaprenyl diphosphate synthase (HEPPP synthase) subunit 1 NYR91_11300 PF02081 Tryptophan RNA-binding attenuator protein NYR91_11305 PF01227 GTP cyclohydrolase I NYR91_11310 PF00216 Bacterial DNA-binding protein NYR91_11315 PF09547 Stage IV sporulation protein A (spore_IV_A) NYR91_11325 PF10966 Protein of unknown function (DUF2768) NYR91_11330 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus NYR91_11330 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus NYR91_11335 PF01926 50S ribosome-binding GTPase NYR91_11335 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal NYR91_11345 PF14045 YIEGIA protein NYR91_11355 PF14140 YpzI-like protein NYR91_11360 PF01070 FMN-dependent dehydrogenase NYR91_11365 PF00575 S1 RNA binding domain NYR91_11370 PF02224 Cytidylate kinase NYR91_11375 PF17313 Family of unknown function (DUF5359) NYR91_11380 PF12945 Flagellar protein YcgR NYR91_11380 PF07238 PilZ domain NYR91_11385 PF14620 YpeB sporulation NYR91_11385 PF03413 Peptidase propeptide and YPEB domain NYR91_11390 PF07486 Cell Wall Hydrolase NYR91_11390 PF01471 Putative peptidoglycan binding domain NYR91_11395 PF13367 PrsW family intramembrane metalloprotease NYR91_11405 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain NYR91_11405 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase NYR91_11410 PF05389 Negative regulator of genetic competence (MecA) NYR91_11415 PF00149 Calcineurin-like phosphoesterase NYR91_11420 PF10864 Protein of unknown function (DUF2663) NYR91_11425 PF01476 LysM domain NYR91_11430 PF02517 CPBP intramembrane metalloprotease NYR91_11435 PF00270 DEAD/DEAH box helicase NYR91_11435 PF00271 Helicase conserved C-terminal domain NYR91_11440 PF14493 Helix-turn-helix domain NYR91_11450 PF12822 ECF transporter, substrate-specific component NYR91_11455 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain NYR91_11455 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain NYR91_11455 PF01842 ACT domain NYR91_11460 PF01487 Type I 3-dehydroquinase NYR91_11470 PF08281 Sigma-70, region 4 NYR91_11470 PF04542 Sigma-70 region 2 NYR91_11475 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NYR91_11475 PF18698 Histidine kinase sensor domain NYR91_11475 PF00512 His Kinase A (phospho-acceptor) domain NYR91_11475 PF00989 PAS fold NYR91_11475 PF00672 HAMP domain NYR91_11480 PF00486 Transcriptional regulatory protein, C terminal NYR91_11480 PF00072 Response regulator receiver domain NYR91_11485 PF01578 Cytochrome C assembly protein NYR91_11490 PF05140 ResB-like family NYR91_11495 PF00578 AhpC/TSA family NYR91_11500 PF00849 RNA pseudouridylate synthase NYR91_11500 PF01479 S4 domain NYR91_11505 PF07670 Nucleoside recognition NYR91_11510 PF07670 Nucleoside recognition NYR91_11515 PF07943 Penicillin-binding protein 5, C-terminal domain NYR91_11515 PF00768 D-alanyl-D-alanine carboxypeptidase NYR91_11520 PF13047 Protein of unknown function (DUF3907) NYR91_11525 PF04079 Segregation and condensation complex subunit ScpB NYR91_11530 PF02616 Segregation and condensation protein ScpA NYR91_11535 PF03745 Domain of unknown function (DUF309) NYR91_11540 PF00583 Acetyltransferase (GNAT) family NYR91_11545 PF00885 6,7-dimethyl-8-ribityllumazine synthase NYR91_11550 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase NYR91_11550 PF00925 GTP cyclohydrolase II NYR91_11555 PF00677 Lumazine binding domain NYR91_11560 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region NYR91_11560 PF01872 RibD C-terminal domain NYR91_11570 PF10502 Signal peptidase, peptidase S26 NYR91_11580 PF09855 Nucleic-acid-binding protein containing Zn-ribbon domain (DUF2082) NYR91_11595 PF10676 Spore germination protein gerPA/gerPF NYR91_11620 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD NYR91_11625 PF06207 Protein of unknown function (DUF1002) NYR91_11630 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain NYR91_11630 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain NYR91_11635 PF03323 Bacillus/Clostridium GerA spore germination protein NYR91_11640 PF14097 Stage V sporulation protein AE1 NYR91_11645 PF03862 SpoVAC/SpoVAEB sporulation membrane protein NYR91_11650 PF07451 Stage V sporulation protein AD (SpoVAD) NYR91_11655 PF03862 SpoVAC/SpoVAEB sporulation membrane protein NYR91_11660 PF13782 Stage V sporulation protein AB NYR91_11665 PF12164 Stage V sporulation protein AA NYR91_11670 PF04545 Sigma-70, region 4 NYR91_11670 PF04539 Sigma-70 region 3 NYR91_11670 PF04542 Sigma-70 region 2 NYR91_11675 PF13581 Histidine kinase-like ATPase domain NYR91_11680 PF01740 STAS domain NYR91_11685 PF00768 D-alanyl-D-alanine carboxypeptidase NYR91_11685 PF07943 Penicillin-binding protein 5, C-terminal domain NYR91_11690 PF01048 Phosphorylase superfamily NYR91_11695 PF01676 Metalloenzyme superfamily NYR91_11700 PF00589 Phage integrase family NYR91_11700 PF02899 Phage integrase, N-terminal SAM-like domain NYR91_11705 PF14004 Protein of unknown function (DUF4227) NYR91_11710 PF01475 Ferric uptake regulator family NYR91_11715 PF01944 Stage II sporulation protein M NYR91_11725 PF03949 Malic enzyme, NAD binding domain NYR91_11725 PF00390 Malic enzyme, N-terminal domain NYR91_11725 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain NYR91_11730 PF03553 Na+/H+ antiporter family NYR91_11735 PF00206 Lyase NYR91_11735 PF10415 Fumarase C C-terminus NYR91_11740 PF00710 Asparaginase, N-terminal NYR91_11740 PF17763 Glutaminase/Asparaginase C-terminal domain NYR91_11745 PF01381 Helix-turn-helix NYR91_11755 PF00293 NUDIX domain NYR91_11760 PF13072 Mother cell inhibitor of FtsZ NYR91_11765 PF00248 Aldo/keto reductase family NYR91_11770 PF13025 Protein of unknown function (DUF3886) NYR91_11775 PF12146 Serine aminopeptidase, S33 NYR91_11780 PF10827 Protein of unknown function (DUF2552) NYR91_11785 PF01521 Iron-sulphur cluster biosynthesis NYR91_11790 PF13673 Acetyltransferase (GNAT) domain NYR91_11790 PF04229 GrpB protein NYR91_11795 PF03992 Antibiotic biosynthesis monooxygenase NYR91_11800 PF00583 Acetyltransferase (GNAT) family NYR91_11805 PF08863 YolD-like protein NYR91_11810 PF11799 impB/mucB/samB family C-terminal domain NYR91_11810 PF00817 impB/mucB/samB family NYR91_11815 PF14164 YqzH-like protein NYR91_11820 PF07690 Major Facilitator Superfamily NYR91_11835 PF00485 Phosphoribulokinase / Uridine kinase family NYR91_11840 PF00291 Pyridoxal-phosphate dependent enzyme NYR91_11845 PF00106 short chain dehydrogenase NYR91_11850 PF00753 Metallo-beta-lactamase superfamily NYR91_11855 PF14748 Pyrroline-5-carboxylate reductase dimerisation NYR91_11855 PF03807 NADP oxidoreductase coenzyme F420-dependent NYR91_11860 PF01546 Peptidase family M20/M25/M40 NYR91_11865 PF00724 NADH:flavin oxidoreductase / NADH oxidase family NYR91_11870 PF12146 Serine aminopeptidase, S33 NYR91_11875 PF00471 Ribosomal protein L33 NYR91_11880 PF12706 Beta-lactamase superfamily domain NYR91_11885 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain NYR91_11885 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain NYR91_11890 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain NYR91_11890 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase NYR91_11895 PF00817 impB/mucB/samB family NYR91_11895 PF11799 impB/mucB/samB family C-terminal domain NYR91_11895 PF11798 IMS family HHH motif NYR91_11905 PF02096 60Kd inner membrane protein NYR91_11910 PF09844 Uncharacterized conserved protein (COG2071) NYR91_11915 PF07687 Peptidase dimerisation domain NYR91_11915 PF01546 Peptidase family M20/M25/M40 NYR91_11920 PF01039 Carboxyl transferase domain NYR91_11935 PF03734 L,D-transpeptidase catalytic domain NYR91_11940 PF11728 Putative aromatic acid exporter C-terminal domain NYR91_11940 PF06081 Aromatic acid exporter family member 1 NYR91_11945 PF00005 ABC transporter NYR91_11950 PF00528 Binding-protein-dependent transport system inner membrane component NYR91_11955 PF00497 Bacterial extracellular solute-binding proteins, family 3 NYR91_11960 PF06491 Disulphide isomerase NYR91_11965 PF00781 Diacylglycerol kinase catalytic domain NYR91_11970 PF07690 Major Facilitator Superfamily NYR91_11975 PF13411 MerR HTH family regulatory protein NYR91_11975 PF06445 GyrI-like small molecule binding domain NYR91_11980 PF02817 e3 binding domain NYR91_11980 PF00364 Biotin-requiring enzyme NYR91_11980 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) NYR91_11985 PF02780 Transketolase, C-terminal domain NYR91_11985 PF02779 Transketolase, pyrimidine binding domain NYR91_11990 PF00676 Dehydrogenase E1 component NYR91_11995 PF07992 Pyridine nucleotide-disulphide oxidoreductase NYR91_11995 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain NYR91_12000 PF00871 Acetokinase family NYR91_12005 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase NYR91_12005 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain NYR91_12010 PF01515 Phosphate acetyl/butaryl transferase NYR91_12015 PF02954 Bacterial regulatory protein, Fis family NYR91_12015 PF00989 PAS fold NYR91_12015 PF00158 Sigma-54 interaction domain NYR91_12020 PF11118 Protein of unknown function (DUF2627) NYR91_12030 PF03972 MmgE/PrpD family NYR91_12035 PF00285 Citrate synthase, C-terminal domain NYR91_12040 PF02770 Acyl-CoA dehydrogenase, middle domain NYR91_12040 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NYR91_12040 PF00441 Acyl-CoA dehydrogenase, C-terminal domain NYR91_12045 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain NYR91_12045 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain NYR91_12050 PF02803 Thiolase, C-terminal domain NYR91_12050 PF00108 Thiolase, N-terminal domain NYR91_12055 PF03009 Glycerophosphoryl diester phosphodiesterase family NYR91_12060 PF01520 N-acetylmuramoyl-L-alanine amidase NYR91_12075 PF00724 NADH:flavin oxidoreductase / NADH oxidase family NYR91_12080 PF00072 Response regulator receiver domain NYR91_12080 PF08769 Sporulation initiation factor Spo0A C terminal NYR91_12085 PF17820 PDZ domain NYR91_12085 PF05580 SpoIVB peptidase S55 NYR91_12090 PF13476 AAA domain NYR91_12095 PF02863 Arginine repressor, C-terminal domain NYR91_12095 PF01316 Arginine repressor, DNA binding domain NYR91_12100 PF01728 FtsJ-like methyltransferase NYR91_12100 PF01479 S4 domain NYR91_12105 PF02780 Transketolase, C-terminal domain NYR91_12105 PF02779 Transketolase, pyrimidine binding domain NYR91_12105 PF13292 1-deoxy-D-xylulose-5-phosphate synthase NYR91_12110 PF00348 Polyprenyl synthetase NYR91_12115 PF02609 Exonuclease VII small subunit NYR91_12120 PF13742 OB-fold nucleic acid binding domain NYR91_12120 PF02601 Exonuclease VII, large subunit NYR91_12125 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain NYR91_12125 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain NYR91_12130 PF01029 NusB family NYR91_12135 PF03780 Asp23 family, cell envelope-related function NYR91_12140 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain NYR91_12140 PF00289 Biotin carboxylase, N-terminal domain NYR91_12140 PF02785 Biotin carboxylase C-terminal domain NYR91_12145 PF00364 Biotin-requiring enzyme NYR91_12150 PF12685 SpoIIIAH-like protein NYR91_12160 PF09581 Stage III sporulation protein AF (Spore_III_AF) NYR91_12165 PF09546 Stage III sporulation protein AE (spore_III_AE) NYR91_12170 PF06686 Stage III sporulation protein AC/AD protein family NYR91_12175 PF06686 Stage III sporulation protein AC/AD protein family NYR91_12180 PF09548 Stage III sporulation protein AB (spore_III_AB) NYR91_12190 PF10942 Protein of unknown function (DUF2619) NYR91_12195 PF09285 Elongation factor P, C-terminal NYR91_12195 PF08207 Elongation factor P (EF-P) KOW-like domain NYR91_12195 PF01132 Elongation factor P (EF-P) OB domain NYR91_12200 PF01321 Creatinase/Prolidase N-terminal domain NYR91_12200 PF00557 Metallopeptidase family M24 NYR91_12205 PF01220 Dehydroquinase class II NYR91_12210 PF11085 Conserved membrane protein YqhR NYR91_12215 PF07136 Protein of unknown function (DUF1385) NYR91_12225 PF01734 Patatin-like phospholipase NYR91_12230 PF01325 Iron dependent repressor, N-terminal DNA binding domain NYR91_12230 PF02742 Iron dependent repressor, metal binding and dimerisation domain NYR91_12235 PF03099 Biotin/lipoate A/B protein ligase family NYR91_12240 PF00581 Rhodanese-like domain NYR91_12245 PF02347 Glycine cleavage system P-protein NYR91_12250 PF02347 Glycine cleavage system P-protein NYR91_12255 PF01571 Aminomethyltransferase folate-binding domain NYR91_12255 PF08669 Glycine cleavage T-protein C-terminal barrel domain NYR91_12260 PF00271 Helicase conserved C-terminal domain NYR91_12260 PF00176 SNF2 family N-terminal domain NYR91_12265 PF11079 Bacterial protein YqhG of unknown function NYR91_12270 PF08671 Anti-repressor SinI NYR91_12275 PF01381 Helix-turn-helix NYR91_12275 PF08671 Anti-repressor SinI NYR91_12280 PF12389 Camelysin metallo-endopeptidase NYR91_12295 PF13028 Protein of unknown function (DUF3889) NYR91_12300 PF14038 YqzE-like protein NYR91_12305 PF14173 ComG operon protein 7 NYR91_12310 PF15980 Putative Competence protein ComGF NYR91_12320 PF07963 Prokaryotic N-terminal methylation motif NYR91_12325 PF07963 Prokaryotic N-terminal methylation motif NYR91_12330 PF00482 Type II secretion system (T2SS), protein F NYR91_12335 PF00437 Type II/IV secretion system protein NYR91_12340 PF01544 CorA-like Mg2+ transporter protein NYR91_12345 PF00571 CBS domain NYR91_12345 PF03471 Transporter associated domain NYR91_12345 PF01595 Cyclin M transmembrane N-terminal domain NYR91_12350 PF14361 RsbT co-antagonist protein rsbRD N-terminal domain NYR91_12350 PF01740 STAS domain NYR91_12360 PF03960 ArsC family NYR91_12365 PF11117 Protein of unknown function (DUF2626) NYR91_12370 PF00753 Metallo-beta-lactamase superfamily NYR91_12375 PF10958 Protein of unknown function (DUF2759) NYR91_12380 PF01910 Thiamine-binding protein NYR91_12390 PF00246 Zinc carboxypeptidase NYR91_12395 PF00884 Sulfatase NYR91_12400 PF00480 ROK family NYR91_12405 PF06014 Bacterial protein of unknown function (DUF910) NYR91_12410 PF01694 Rhomboid family NYR91_12420 PF01812 5-formyltetrahydrofolate cyclo-ligase family NYR91_12425 PF00471 Ribosomal protein L33 NYR91_12430 PF13439 Glycosyltransferase Family 4 NYR91_12430 PF00534 Glycosyl transferases group 1 NYR91_12450 PF00005 ABC transporter NYR91_12455 PF00005 ABC transporter NYR91_12460 PF00528 Binding-protein-dependent transport system inner membrane component NYR91_12465 PF00528 Binding-protein-dependent transport system inner membrane component NYR91_12470 PF12849 PBP superfamily domain NYR91_12475 PF00905 Penicillin binding protein transpeptidase domain NYR91_12475 PF03717 Penicillin-binding Protein dimerisation domain NYR91_12480 PF07690 Major Facilitator Superfamily NYR91_12485 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain NYR91_12485 PF02777 Iron/manganese superoxide dismutases, C-terminal domain NYR91_12490 PF04306 Protein of unknown function (DUF456) NYR91_12495 PF06691 Protein of unknown function (DUF1189) NYR91_12505 PF04551 GcpE protein NYR91_12520 PF01475 Ferric uptake regulator family NYR91_12525 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 NYR91_12525 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) NYR91_12530 PF11116 Protein of unknown function (DUF2624) NYR91_12535 PF01261 Xylose isomerase-like TIM barrel NYR91_12540 PF00271 Helicase conserved C-terminal domain NYR91_12540 PF00270 DEAD/DEAH box helicase NYR91_12545 PF14181 YqfQ-like protein NYR91_12550 PF02401 LytB protein NYR91_12555 PF01784 NIF3 (NGG1p interacting factor 3) NYR91_12560 PF04816 tRNA (adenine(22)-N(1))-methyltransferase NYR91_12565 PF13442 Cytochrome C oxidase, cbb3-type, subunit III NYR91_12570 PF03979 Sigma-70 factor, region 1.1 NYR91_12570 PF04539 Sigma-70 region 3 NYR91_12570 PF04545 Sigma-70, region 4 NYR91_12570 PF00140 Sigma-70 factor, region 1.2 NYR91_12570 PF04542 Sigma-70 region 2 NYR91_12575 PF01807 CHC2 zinc finger NYR91_12575 PF08275 DNA primase catalytic core, N-terminal domain NYR91_12575 PF10410 DnaB-helicase binding domain of primase NYR91_12580 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 NYR91_12585 PF03618 Kinase/pyrophosphorylase NYR91_12590 PF08279 HTH domain NYR91_12590 PF00571 CBS domain NYR91_12595 PF02092 Glycyl-tRNA synthetase beta subunit NYR91_12600 PF02091 Glycyl-tRNA synthetase alpha subunit NYR91_12605 PF02565 Recombination protein O C terminal NYR91_12605 PF11967 Recombination protein O N terminal NYR91_12610 PF14006 YqzL-like protein NYR91_12615 PF07650 KH domain NYR91_12615 PF01926 50S ribosome-binding GTPase NYR91_12620 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region NYR91_12625 PF01219 Prokaryotic diacylglycerol kinase NYR91_12630 PF02130 Uncharacterized protein family UPF0054 NYR91_12635 PF01966 HD domain NYR91_12635 PF07698 7TM receptor with intracellular HD hydrolase NYR91_12635 PF07697 7TM-HD extracellular NYR91_12640 PF02562 PhoH-like protein NYR91_12645 PF06898 Putative stage IV sporulation protein YqfD NYR91_12650 PF07873 YabP family NYR91_12660 PF12127 SigmaW regulon antibacterial NYR91_12665 PF01957 NfeD-like C-terminal, partner-binding NYR91_12665 PF01972 Serine dehydrogenase proteinase NYR91_12670 PF09424 Yqey-like protein NYR91_12675 PF01165 Ribosomal protein S21 NYR91_12680 PF02690 Na+/Pi-cotransporter NYR91_12685 PF04055 Radical SAM superfamily NYR91_12685 PF01938 TRAM domain NYR91_12685 PF00919 Uncharacterized protein family UPF0004 NYR91_12690 PF04452 RNA methyltransferase NYR91_12700 PF01556 DnaJ C terminal domain NYR91_12700 PF00684 DnaJ central domain NYR91_12700 PF00226 DnaJ domain NYR91_12705 PF00012 Hsp70 protein NYR91_12710 PF01025 GrpE NYR91_12715 PF01628 HrcA protein C terminal domain NYR91_12720 PF04055 Radical SAM superfamily NYR91_12720 PF06969 HemN C-terminal domain NYR91_12725 PF06421 GTP-binding protein LepA C-terminus NYR91_12725 PF03144 Elongation factor Tu domain 2 NYR91_12725 PF00009 Elongation factor Tu GTP binding domain NYR91_12725 PF00679 Elongation factor G C-terminus NYR91_12730 PF12438 Protein of unknown function (DUF3679) NYR91_12735 PF07454 Stage II sporulation protein P (SpoIIP) NYR91_12740 PF03418 Germination protease NYR91_12745 PF01649 Ribosomal protein S20 NYR91_12750 PF06144 DNA polymerase III, delta subunit NYR91_12760 PF14141 YqzM-like protein NYR91_12765 PF03772 Competence protein NYR91_12765 PF13567 Domain of unknown function (DUF4131) NYR91_12765 PF00753 Metallo-beta-lactamase superfamily NYR91_12770 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region NYR91_12775 PF10531 SLBB domain NYR91_12780 PF03807 NADP oxidoreductase coenzyme F420-dependent NYR91_12780 PF14748 Pyrroline-5-carboxylate reductase dimerisation NYR91_12785 PF13649 Methyltransferase domain NYR91_12795 PF01966 HD domain NYR91_12800 PF01467 Cytidylyltransferase-like NYR91_12805 PF01985 CRS1 / YhbY (CRM) domain NYR91_12810 PF18317 Shikimate 5'-dehydrogenase C-terminal domain NYR91_12810 PF01488 Shikimate / quinate 5-dehydrogenase NYR91_12810 PF08501 Shikimate dehydrogenase substrate binding domain NYR91_12815 PF01926 50S ribosome-binding GTPase NYR91_12825 PF08970 Sporulation inhibitor A NYR91_12830 PF00657 GDSL-like Lipase/Acylhydrolase NYR91_12835 PF01471 Putative peptidoglycan binding domain NYR91_12835 PF01510 N-acetylmuramoyl-L-alanine amidase NYR91_12840 PF09335 SNARE associated Golgi protein NYR91_12845 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain NYR91_12845 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase NYR91_12855 PF14040 Deoxyribonuclease NucA/NucB NYR91_12860 PF04542 Sigma-70 region 2 NYR91_12860 PF04545 Sigma-70, region 4 NYR91_12885 PF00440 Bacterial regulatory proteins, tetR family NYR91_12890 PF02129 X-Pro dipeptidyl-peptidase (S15 family) NYR91_12895 PF00381 PTS HPr component phosphorylation site NYR91_12900 PF00106 short chain dehydrogenase NYR91_12905 PF07690 Major Facilitator Superfamily NYR91_12915 PF02627 Carboxymuconolactone decarboxylase family NYR91_12920 PF00248 Aldo/keto reductase family NYR91_12940 PF18801 response regulator aspartate phosphatase H, N terminal NYR91_12940 PF13176 Tetratricopeptide repeat NYR91_12955 PF14410 HNH/ENDO VII superfamily nuclease with conserved GHE residues NYR91_12955 PF04740 LXG domain of WXG superfamily NYR91_12955 PF14449 Pre-toxin TG NYR91_13020 PF06445 GyrI-like small molecule binding domain NYR91_13020 PF13411 MerR HTH family regulatory protein NYR91_13025 PF07690 Major Facilitator Superfamily NYR91_13030 PF00583 Acetyltransferase (GNAT) family NYR91_13035 PF01595 Cyclin M transmembrane N-terminal domain NYR91_13035 PF03471 Transporter associated domain NYR91_13035 PF00571 CBS domain NYR91_13040 PF14142 YrzO-like protein NYR91_13055 PF01337 Barstar (barnase inhibitor) NYR91_13060 PF00067 Cytochrome P450 NYR91_13065 PF00857 Isochorismatase family NYR91_13070 PF10823 Protein of unknown function (DUF2568) NYR91_13085 PF05163 DinB family NYR91_13090 PF04439 Streptomycin adenylyltransferase NYR91_13095 PF03060 Nitronate monooxygenase NYR91_13105 PF01408 Oxidoreductase family, NAD-binding Rossmann fold NYR91_13105 PF02894 Oxidoreductase family, C-terminal alpha/beta domain NYR91_13110 PF00881 Nitroreductase family NYR91_13115 PF01638 HxlR-like helix-turn-helix NYR91_13120 PF15493 Domain of unknown function, YrpD NYR91_13125 PF09680 Family of unknown function NYR91_13140 PF13411 MerR HTH family regulatory protein NYR91_13140 PF06445 GyrI-like small molecule binding domain NYR91_13145 PF04237 YjbR NYR91_13160 PF09223 ZinT (YodA) periplasmic lipocalin-like zinc-recruitment NYR91_13165 PF08281 Sigma-70, region 4 NYR91_13165 PF04542 Sigma-70 region 2 NYR91_13170 PF00248 Aldo/keto reductase family NYR91_13175 PF01374 Glycosyl hydrolase family 46 NYR91_13185 PF00561 alpha/beta hydrolase fold NYR91_13200 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily NYR91_13210 PF07875 Coat F domain NYR91_13215 PF13823 Alcohol dehydrogenase GroES-associated NYR91_13215 PF08240 Alcohol dehydrogenase GroES-like domain NYR91_13215 PF00107 Zinc-binding dehydrogenase NYR91_13225 PF07875 Coat F domain NYR91_13230 PF13411 MerR HTH family regulatory protein NYR91_13240 PF00107 Zinc-binding dehydrogenase NYR91_13240 PF08240 Alcohol dehydrogenase GroES-like domain NYR91_13245 PF01965 DJ-1/PfpI family NYR91_13250 PF00251 Glycosyl hydrolases family 32 N-terminal domain NYR91_13250 PF08244 Glycosyl hydrolases family 32 C terminal NYR91_13260 PF03613 PTS system mannose/fructose/sorbose family IID component NYR91_13265 PF03609 PTS system sorbose-specific iic component NYR91_13270 PF03830 PTS system sorbose subfamily IIB component NYR91_13275 PF03610 PTS system fructose IIA component NYR91_13280 PF00158 Sigma-54 interaction domain NYR91_13280 PF03610 PTS system fructose IIA component NYR91_13280 PF00874 PRD domain NYR91_13290 PF00324 Amino acid permease NYR91_13295 PF01810 LysE type translocator NYR91_13300 PF11495 Archaeal transcriptional regulator TrmB NYR91_13300 PF01978 Sugar-specific transcriptional regulator TrmB NYR91_13305 PF08281 Sigma-70, region 4 NYR91_13305 PF04542 Sigma-70 region 2 NYR91_13310 PF13739 Deacetylase PdaC NYR91_13310 PF11738 Protein of unknown function (DUF3298) NYR91_13315 PF01757 Acyltransferase family NYR91_13320 PF14145 YrhK-like protein NYR91_13325 PF00067 Cytochrome P450 NYR91_13325 PF00175 Oxidoreductase NAD-binding domain NYR91_13325 PF00258 Flavodoxin NYR91_13325 PF00667 FAD binding domain NYR91_13330 PF00440 Bacterial regulatory proteins, tetR family NYR91_13330 PF16295 Tetracyclin repressor-like, C-terminal domain NYR91_13335 PF08241 Methyltransferase domain NYR91_13345 PF09501 Probable sporulation protein (Bac_small_yrzI) NYR91_13350 PF01226 Formate/nitrite transporter NYR91_13355 PF10057 Uncharacterized conserved protein (DUF2294) NYR91_13360 PF00384 Molybdopterin oxidoreductase NYR91_13360 PF04879 Molybdopterin oxidoreductase Fe4S4 domain NYR91_13360 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region NYR91_13360 PF01568 Molydopterin dinucleotide binding domain NYR91_13360 PF00037 4Fe-4S binding domain NYR91_13365 PF07849 Protein of unknown function (DUF1641) NYR91_13370 PF14143 YrhC-like protein NYR91_13375 PF01053 Cys/Met metabolism PLP-dependent enzyme NYR91_13380 PF00291 Pyridoxal-phosphate dependent enzyme NYR91_13385 PF01048 Phosphorylase superfamily NYR91_13390 PF13649 Methyltransferase domain NYR91_13395 PF10750 Protein of unknown function (DUF2536) NYR91_13400 PF07423 Domain of unknown function (DUF1510) NYR91_13405 PF00905 Penicillin binding protein transpeptidase domain NYR91_13405 PF03717 Penicillin-binding Protein dimerisation domain NYR91_13410 PF01272 Transcription elongation factor, GreA/GreB, C-term NYR91_13410 PF03449 Transcription elongation factor, N-terminal NYR91_13415 PF00485 Phosphoribulokinase / Uridine kinase family NYR91_13420 PF01136 Peptidase family U32 NYR91_13420 PF16325 Peptidase family U32 C-terminal domain NYR91_13425 PF01136 Peptidase family U32 NYR91_13430 PF01596 O-methyltransferase NYR91_13435 PF02618 YceG-like family NYR91_13440 PF06949 Protein of unknown function (DUF1292) NYR91_13445 PF03652 Holliday junction resolvase NYR91_13450 PF06135 IreB regulatory phosphoprotein NYR91_13455 PF02272 DHHA1 domain NYR91_13455 PF01411 tRNA synthetases class II (A) NYR91_13455 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain NYR91_13460 PF01594 AI-2E family transporter NYR91_13465 PF00005 ABC transporter NYR91_13470 PF00497 Bacterial extracellular solute-binding proteins, family 3 NYR91_13475 PF00528 Binding-protein-dependent transport system inner membrane component NYR91_13480 PF00528 Binding-protein-dependent transport system inner membrane component NYR91_13485 PF13056 Protein of unknown function (DUF3918) NYR91_13495 PF05239 PRC-barrel domain NYR91_13500 PF14490 Helix-hairpin-helix containing domain NYR91_13500 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain NYR91_13500 PF13538 UvrD-like helicase C-terminal domain NYR91_13505 PF07719 Tetratricopeptide repeat NYR91_13505 PF13181 Tetratricopeptide repeat NYR91_13515 PF00266 Aminotransferase class-V NYR91_13520 PF02082 Transcriptional regulator NYR91_13525 PF16193 AAA C-terminal domain NYR91_13525 PF12002 MgsA AAA+ ATPase C terminal NYR91_13525 PF05496 Holliday junction DNA helicase RuvB P-loop domain NYR91_13530 PF00899 ThiF family NYR91_13540 PF02938 GAD domain NYR91_13540 PF01336 OB-fold nucleic acid binding domain NYR91_13540 PF00152 tRNA synthetases class II (D, K and N) NYR91_13545 PF13393 Histidyl-tRNA synthetase NYR91_13545 PF03129 Anticodon binding domain NYR91_13550 PF17449 Uncharacterized YrzK-like NYR91_13555 PF08239 Bacterial SH3 domain NYR91_13555 PF01520 N-acetylmuramoyl-L-alanine amidase NYR91_13560 PF02580 D-Tyr-tRNA(Tyr) deacylase NYR91_13565 PF02824 TGS domain NYR91_13565 PF04607 Region found in RelA / SpoT proteins NYR91_13565 PF13291 ACT domain NYR91_13570 PF00156 Phosphoribosyl transferase domain NYR91_13575 PF17768 RecJ OB domain NYR91_13575 PF02272 DHHA1 domain NYR91_13575 PF01368 DHH family NYR91_13575 PF10141 Single-strand DNA-specific exonuclease, C terminal domain NYR91_13580 PF06305 Lipopolysaccharide assembly protein A domain NYR91_13585 PF02080 TrkA-C domain NYR91_13590 PF02355 Protein export membrane protein NYR91_13590 PF07549 SecD/SecF GG Motif NYR91_13595 PF13797 Post-transcriptional regulator NYR91_13600 PF14667 Polysaccharide biosynthesis C-terminal domain NYR91_13600 PF01943 Polysaccharide biosynthesis protein NYR91_13605 PF04239 Protein of unknown function (DUF421) NYR91_13610 PF12670 Protein of unknown function (DUF3792) NYR91_13615 PF02699 Preprotein translocase subunit NYR91_13620 PF01702 Queuine tRNA-ribosyltransferase NYR91_13625 PF02547 Queuosine biosynthesis protein NYR91_13630 PF11146 Protein of unknown function (DUF2905) NYR91_13635 PF17864 RuvB AAA lid domain NYR91_13635 PF05496 Holliday junction DNA helicase RuvB P-loop domain NYR91_13635 PF05491 RuvB C-terminal winged helix domain NYR91_13640 PF07499 RuvA, C-terminal domain NYR91_13640 PF01330 RuvA N terminal domain NYR91_13645 PF08977 Bypass of Forespore C, N terminal NYR91_13645 PF08955 BofC C-terminal domain NYR91_13650 PF07690 Major Facilitator Superfamily NYR91_13655 PF02894 Oxidoreductase family, C-terminal alpha/beta domain NYR91_13655 PF01408 Oxidoreductase family, NAD-binding Rossmann fold NYR91_13685 PF01235 Sodium:alanine symporter family NYR91_13690 PF01709 Transcriptional regulator NYR91_13695 PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) NYR91_13700 PF01476 LysM domain NYR91_13705 PF02445 Quinolinate synthetase A protein NYR91_13710 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain NYR91_13710 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain NYR91_13715 PF00890 FAD binding domain NYR91_13715 PF02910 Fumarate reductase flavoprotein C-term NYR91_13720 PF00266 Aminotransferase class-V NYR91_13725 PF02829 3H domain NYR91_13725 PF08279 HTH domain NYR91_13730 PF00800 Prephenate dehydratase NYR91_13730 PF01842 ACT domain NYR91_13735 PF01842 ACT domain NYR91_13740 PF01926 50S ribosome-binding GTPase NYR91_13740 PF01018 GTP1/OBG NYR91_13740 PF09269 Domain of unknown function (DUF1967) NYR91_13745 PF14682 Sporulation initiation phospho-transferase B, C-terminal NYR91_13745 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain NYR91_13755 PF01016 Ribosomal L27 protein NYR91_13760 PF04327 Cysteine protease Prp NYR91_13765 PF00829 Ribosomal prokaryotic L21 protein NYR91_13770 PF02163 Peptidase family M50 NYR91_13775 PF01551 Peptidase family M23 NYR91_13780 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain NYR91_13785 PF03775 Septum formation inhibitor MinC, C-terminal domain NYR91_13790 PF04093 rod shape-determining protein MreD NYR91_13795 PF04085 rod shape-determining protein MreC NYR91_13805 PF04002 RadC-like JAB domain NYR91_13805 PF00633 Helix-hairpin-helix motif NYR91_13810 PF02545 Maf-like protein NYR91_13815 PF05036 Sporulation related domain NYR91_13820 PF06750 Bacterial Peptidase A24 N-terminal domain NYR91_13820 PF01478 Type IV leader peptidase family NYR91_13825 PF08245 Mur ligase middle domain NYR91_13825 PF02875 Mur ligase family, glutamate ligase domain NYR91_13830 PF00133 tRNA synthetases class I (I, L, M and V) NYR91_13830 PF08264 Anticodon-binding domain of tRNA NYR91_13830 PF10458 Valyl tRNA synthetase tRNA binding arm NYR91_13845 PF01476 LysM domain NYR91_13850 PF00202 Aminotransferase class-III NYR91_13855 PF00490 Delta-aminolevulinic acid dehydratase NYR91_13860 PF02602 Uroporphyrinogen-III synthase HemD NYR91_13865 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain NYR91_13865 PF03900 Porphobilinogen deaminase, C-terminal domain NYR91_13870 PF01578 Cytochrome C assembly protein NYR91_13875 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain NYR91_13875 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain NYR91_13875 PF01488 Shikimate / quinate 5-dehydrogenase NYR91_13885 PF01926 50S ribosome-binding GTPase NYR91_13890 PF05362 Lon protease (S16) C-terminal proteolytic domain NYR91_13890 PF02190 ATP-dependent protease La (LON) substrate-binding domain NYR91_13890 PF00004 ATPase family associated with various cellular activities (AAA) NYR91_13895 PF00004 ATPase family associated with various cellular activities (AAA) NYR91_13895 PF05362 Lon protease (S16) C-terminal proteolytic domain NYR91_13900 PF07724 AAA domain (Cdc48 subfamily) NYR91_13900 PF10431 C-terminal, D2-small domain, of ClpB protein NYR91_13900 PF06689 ClpX C4-type zinc finger NYR91_13905 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase NYR91_13905 PF05697 Bacterial trigger factor protein (TF) NYR91_13905 PF05698 Bacterial trigger factor protein (TF) C-terminus NYR91_13915 PF00694 Aconitase C-terminal domain NYR91_13920 PF00330 Aconitase family (aconitate hydratase) NYR91_13925 PF00180 Isocitrate/isopropylmalate dehydrogenase NYR91_13930 PF00682 HMGL-like NYR91_13930 PF08502 LeuA allosteric (dimerisation) domain NYR91_13935 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain NYR91_13935 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain NYR91_13940 PF10369 Small subunit of acetolactate synthase NYR91_13940 PF01842 ACT domain NYR91_13945 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain NYR91_13945 PF00205 Thiamine pyrophosphate enzyme, central domain NYR91_13945 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain NYR91_13955 PF00583 Acetyltransferase (GNAT) family NYR91_13965 PF11181 Heat induced stress protein YflT NYR91_13965 PF09557 Domain of unknown function (DUF2382) NYR91_13975 PF12850 Calcineurin-like phosphoesterase superfamily domain NYR91_13980 PF01725 Ham1 family NYR91_13985 PF03725 3' exoribonuclease family, domain 2 NYR91_13985 PF01138 3' exoribonuclease family, domain 1 NYR91_13990 PF10646 Sporulation and spore germination NYR91_13995 PF01177 Asp/Glu/Hydantoin racemase NYR91_14000 PF01047 MarR family NYR91_14005 PF00196 Bacterial regulatory proteins, luxR family NYR91_14010 PF03061 Thioesterase superfamily NYR91_14015 PF13183 4Fe-4S dicluster domain NYR91_14015 PF13085 2Fe-2S iron-sulfur cluster binding domain NYR91_14020 PF02910 Fumarate reductase flavoprotein C-term NYR91_14020 PF00890 FAD binding domain NYR91_14025 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit NYR91_14030 PF10702 Protein of unknown function (DUF2507) NYR91_14035 PF01842 ACT domain NYR91_14035 PF00696 Amino acid kinase family NYR91_14035 PF13840 ACT domain NYR91_14040 PF02151 UvrB/uvrC motif NYR91_14040 PF01541 GIY-YIG catalytic domain NYR91_14040 PF08459 UvrC Helix-hairpin-helix N-terminal NYR91_14045 PF00085 Thioredoxin NYR91_14050 PF06964 Alpha-L-arabinofuranosidase C-terminal domain NYR91_14055 PF00766 Electron transfer flavoprotein FAD-binding domain NYR91_14055 PF01012 Electron transfer flavoprotein domain NYR91_14060 PF01012 Electron transfer flavoprotein domain NYR91_14065 PF00378 Enoyl-CoA hydratase/isomerase NYR91_14070 PF00440 Bacterial regulatory proteins, tetR family NYR91_14070 PF08359 YsiA-like protein, C-terminal region NYR91_14075 PF00501 AMP-binding enzyme NYR91_14075 PF13193 AMP-binding enzyme C-terminal domain NYR91_14080 PF03994 Domain of Unknown Function (DUF350) NYR91_14085 PF00488 MutS domain V NYR91_14085 PF01713 Smr domain NYR91_14090 PF02811 PHP domain NYR91_14090 PF14791 DNA polymerase beta thumb NYR91_14090 PF14716 Helix-hairpin-helix domain NYR91_14095 PF02674 Colicin V production protein NYR91_14100 PF05164 Cell division protein ZapA NYR91_14105 PF01351 Ribonuclease HII NYR91_14105 PF11858 Domain of unknown function (DUF3378) NYR91_14110 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain NYR91_14110 PF01588 Putative tRNA binding domain NYR91_14110 PF03147 Ferredoxin-fold anticodon binding domain NYR91_14110 PF03484 tRNA synthetase B5 domain NYR91_14110 PF03483 B3/4 domain NYR91_14115 PF01409 tRNA synthetases class II core domain (F) NYR91_14115 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain NYR91_14125 PF08032 RNA 2'-O ribose methyltransferase substrate binding NYR91_14125 PF00588 SpoU rRNA Methylase family NYR91_14130 PF14098 Small, acid-soluble spore protein I NYR91_14135 PF05651 Putative sugar diacid recognition NYR91_14135 PF17853 GGDEF-like domain NYR91_14135 PF13556 PucR C-terminal helix-turn-helix domain NYR91_14140 PF02913 FAD linked oxidases, C-terminal domain NYR91_14140 PF01565 FAD binding domain NYR91_14145 PF02754 Cysteine-rich domain NYR91_14145 PF13183 4Fe-4S dicluster domain NYR91_14150 PF12681 Glyoxalase-like domain NYR91_14160 PF02554 Carbon starvation protein CstA NYR91_14160 PF13722 5TM C-terminal transporter carbon starvation CstA NYR91_14165 PF06964 Alpha-L-arabinofuranosidase C-terminal domain NYR91_14170 PF00528 Binding-protein-dependent transport system inner membrane component NYR91_14175 PF00528 Binding-protein-dependent transport system inner membrane component NYR91_14180 PF01547 Bacterial extracellular solute-binding protein NYR91_14185 PF13685 Iron-containing alcohol dehydrogenase NYR91_14190 PF13344 Haloacid dehalogenase-like hydrolase NYR91_14195 PF00596 Class II Aldolase and Adducin N-terminal domain NYR91_14200 PF00370 FGGY family of carbohydrate kinases, N-terminal domain NYR91_14200 PF02782 FGGY family of carbohydrate kinases, C-terminal domain NYR91_14205 PF02610 L-arabinose isomerase NYR91_14205 PF11762 L-arabinose isomerase C-terminal domain NYR91_14210 PF04616 Glycosyl hydrolases family 43 NYR91_14215 PF05343 M42 glutamyl aminopeptidase NYR91_14225 PF06961 Protein of unknown function (DUF1294) NYR91_14230 PF00453 Ribosomal protein L20 NYR91_14235 PF01632 Ribosomal protein L35 NYR91_14240 PF05198 Translation initiation factor IF-3, N-terminal domain NYR91_14240 PF00707 Translation initiation factor IF-3, C-terminal domain NYR91_14250 PF04172 LrgB-like family NYR91_14255 PF03788 LrgA family NYR91_14260 PF00072 Response regulator receiver domain NYR91_14260 PF04397 LytTr DNA-binding domain NYR91_14265 PF06580 Histidine kinase NYR91_14265 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NYR91_14265 PF07694 5TMR of 5TMR-LYT NYR91_14270 PF13419 Haloacid dehalogenase-like hydrolase NYR91_14275 PF02824 TGS domain NYR91_14275 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) NYR91_14275 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain NYR91_14275 PF03129 Anticodon binding domain NYR91_14280 PF08812 YtxC-like family NYR91_14285 PF09335 SNARE associated Golgi protein NYR91_14290 PF07319 Primosomal protein DnaI N-terminus NYR91_14290 PF01695 IstB-like ATP binding protein NYR91_14295 PF07261 Replication initiation and membrane attachment NYR91_14300 PF03477 ATP cone domain NYR91_14305 PF02675 S-adenosylmethionine decarboxylase NYR91_14310 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain NYR91_14310 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain NYR91_14315 PF01638 HxlR-like helix-turn-helix NYR91_14320 PF07690 Major Facilitator Superfamily NYR91_14325 PF00248 Aldo/keto reductase family NYR91_14330 PF01121 Dephospho-CoA kinase NYR91_14340 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain NYR91_14340 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain NYR91_14340 PF06827 Zinc finger found in FPG and IleRS NYR91_14345 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain NYR91_14345 PF00476 DNA polymerase family A NYR91_14345 PF01367 5'-3' exonuclease, C-terminal SAM fold NYR91_14350 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NYR91_14350 PF00512 His Kinase A (phospho-acceptor) domain NYR91_14350 PF00989 PAS fold NYR91_14350 PF16736 Single Cache-like NYR91_14355 PF00072 Response regulator receiver domain NYR91_14355 PF00486 Transcriptional regulatory protein, C terminal NYR91_14360 PF00056 lactate/malate dehydrogenase, NAD binding domain NYR91_14360 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain NYR91_14365 PF00180 Isocitrate/isopropylmalate dehydrogenase NYR91_14370 PF00285 Citrate synthase, C-terminal domain NYR91_14375 PF04284 Protein of unknown function (DUF441) NYR91_14380 PF01594 AI-2E family transporter NYR91_14385 PF04186 FxsA cytoplasmic membrane protein NYR91_14390 PF00391 PEP-utilising enzyme, mobile domain NYR91_14390 PF02887 Pyruvate kinase, alpha/beta domain NYR91_14390 PF00224 Pyruvate kinase, barrel domain NYR91_14395 PF00365 Phosphofructokinase NYR91_14400 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit NYR91_14405 PF17848 Acetyl-coA carboxylase zinc finger domain NYR91_14405 PF01039 Carboxyl transferase domain NYR91_14410 PF00390 Malic enzyme, N-terminal domain NYR91_14410 PF03949 Malic enzyme, NAD binding domain NYR91_14415 PF17657 Bacterial DNA polymerase III alpha subunit finger domain NYR91_14415 PF14579 Helix-hairpin-helix motif NYR91_14415 PF02811 PHP domain NYR91_14415 PF01336 OB-fold nucleic acid binding domain NYR91_14415 PF07733 Bacterial DNA polymerase III alpha NTPase domain NYR91_14420 PF14034 Sporulation protein YtrH NYR91_14435 PF02272 DHHA1 domain NYR91_14435 PF01368 DHH family NYR91_14440 PF14007 YtpI-like protein NYR91_14445 PF00392 Bacterial regulatory proteins, gntR family NYR91_14445 PF07085 DRTGG domain NYR91_14445 PF00571 CBS domain NYR91_14445 PF03061 Thioesterase superfamily NYR91_14465 PF14698 Argininosuccinate lyase C-terminal NYR91_14465 PF00206 Lyase NYR91_14470 PF00764 Arginosuccinate synthase NYR91_14475 PF00994 Probable molybdopterin binding domain NYR91_14480 PF00871 Acetokinase family NYR91_14490 PF02384 N-6 DNA Methylase NYR91_14495 PF08534 Redoxin NYR91_14500 PF09579 Sporulation protein YtfJ (Spore_YtfJ) NYR91_14505 PF11167 Protein of unknown function (DUF2953) NYR91_14510 PF06271 RDD family NYR91_14515 PF01343 Peptidase family S49 NYR91_14520 PF01513 ATP-NAD kinase NYR91_14525 PF07969 Amidohydrolase family NYR91_14530 PF00501 AMP-binding enzyme NYR91_14530 PF13193 AMP-binding enzyme C-terminal domain NYR91_14535 PF00269 Small, acid-soluble spore proteins, alpha/beta type NYR91_14540 PF02568 Thiamine biosynthesis protein (ThiI) NYR91_14540 PF02926 THUMP domain NYR91_14545 PF00266 Aminotransferase class-V NYR91_14550 PF05525 Branched-chain amino acid transport protein NYR91_14555 PF06160 Septation ring formation regulator, EzrA NYR91_14560 PF02811 PHP domain NYR91_14565 PF00440 Bacterial regulatory proteins, tetR family NYR91_14570 PF13185 GAF domain NYR91_14575 PF00990 Diguanylate cyclase, GGDEF domain NYR91_14580 PF01479 S4 domain NYR91_14580 PF00163 Ribosomal protein S4/S9 N-terminal domain NYR91_14590 PF00579 tRNA synthetases class I (W and Y) NYR91_14590 PF01479 S4 domain NYR91_14595 PF13193 AMP-binding enzyme C-terminal domain NYR91_14595 PF00501 AMP-binding enzyme NYR91_14600 PF00583 Acetyltransferase (GNAT) family NYR91_14605 PF00571 CBS domain NYR91_14610 PF00850 Histone deacetylase domain NYR91_14615 PF00691 OmpA family NYR91_14615 PF13677 Membrane MotB of proton-channel complex MotA/MotB NYR91_14620 PF01618 MotA/TolQ/ExbB proton channel family NYR91_14625 PF00356 Bacterial regulatory proteins, lacI family NYR91_14630 PF00793 DAHP synthetase I family NYR91_14630 PF01817 Chorismate mutase type II NYR91_14635 PF11009 Protein of unknown function (DUF2847) NYR91_14640 PF12732 YtxH-like protein NYR91_14645 PF06103 Bacterial protein of unknown function (DUF948) NYR91_14650 PF08245 Mur ligase middle domain NYR91_14650 PF02875 Mur ligase family, glutamate ligase domain NYR91_14650 PF01225 Mur ligase family, catalytic domain NYR91_14655 PF01580 FtsK/SpoIIIE family NYR91_14655 PF09397 Ftsk gamma domain NYR91_14655 PF17854 FtsK alpha domain NYR91_14660 PF14794 Domain of unknown function (DUF4479) NYR91_14660 PF01588 Putative tRNA binding domain NYR91_14665 PF07285 Protein of unknown function (DUF1444) NYR91_14670 PF00085 Thioredoxin NYR91_14680 PF11071 Nucleoside 2-deoxyribosyltransferase YtoQ NYR91_14685 PF05343 M42 glutamyl aminopeptidase NYR91_14690 PF03413 Peptidase propeptide and YPEB domain NYR91_14695 PF03949 Malic enzyme, NAD binding domain NYR91_14695 PF00390 Malic enzyme, N-terminal domain NYR91_14700 PF00753 Metallo-beta-lactamase superfamily NYR91_14705 PF02390 Putative methyltransferase NYR91_14710 PF14165 YtzH-like protein NYR91_14715 PF01636 Phosphotransferase enzyme family NYR91_14720 PF00128 Alpha amylase, catalytic domain NYR91_14720 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) NYR91_14720 PF17999 Pullulanase N1-terminal domain NYR91_14725 PF00781 Diacylglycerol kinase catalytic domain NYR91_14740 PF00291 Pyridoxal-phosphate dependent enzyme NYR91_14745 PF01546 Peptidase family M20/M25/M40 NYR91_14750 PF00860 Permease family NYR91_14755 PF05975 Bacterial ABC transporter protein EcsB NYR91_14760 PF00005 ABC transporter NYR91_14765 PF08220 DeoR-like helix-turn-helix domain NYR91_14770 PF01479 S4 domain NYR91_14770 PF00849 RNA pseudouridylate synthase NYR91_14775 PF14667 Polysaccharide biosynthesis C-terminal domain NYR91_14775 PF01943 Polysaccharide biosynthesis protein NYR91_14785 PF02028 BCCT, betaine/carnitine/choline family transporter NYR91_14790 PF10957 Sporulation protein Cse60 NYR91_14795 PF04854 Protein of unknown function, DUF624 NYR91_14800 PF01408 Oxidoreductase family, NAD-binding Rossmann fold NYR91_14800 PF02894 Oxidoreductase family, C-terminal alpha/beta domain NYR91_14810 PF07470 Glycosyl Hydrolase Family 88 NYR91_14815 PF00528 Binding-protein-dependent transport system inner membrane component NYR91_14820 PF12833 Helix-turn-helix domain NYR91_14820 PF17853 GGDEF-like domain NYR91_14825 PF13416 Bacterial extracellular solute-binding protein NYR91_14830 PF00528 Binding-protein-dependent transport system inner membrane component NYR91_14835 PF01370 NAD dependent epimerase/dehydratase family NYR91_14840 PF00067 Cytochrome P450 NYR91_14845 PF04055 Radical SAM superfamily NYR91_14845 PF06968 Biotin and Thiamin Synthesis associated domain NYR91_14855 PF00155 Aminotransferase class I and II NYR91_14860 PF00202 Aminotransferase class-III NYR91_14865 PF03744 6-carboxyhexanoate--CoA ligase NYR91_14870 PF01738 Dienelactone hydrolase family NYR91_14875 PF00356 Bacterial regulatory proteins, lacI family NYR91_14880 PF01547 Bacterial extracellular solute-binding protein NYR91_14885 PF00528 Binding-protein-dependent transport system inner membrane component NYR91_14890 PF00528 Binding-protein-dependent transport system inner membrane component NYR91_14895 PF11975 Family 4 glycosyl hydrolase C-terminal domain NYR91_14895 PF02056 Family 4 glycosyl hydrolase NYR91_14900 PF00581 Rhodanese-like domain NYR91_14905 PF13603 Leucyl-tRNA synthetase, Domain 2 NYR91_14905 PF09334 tRNA synthetases class I (M) NYR91_14905 PF00133 tRNA synthetases class I (I, L, M and V) NYR91_14905 PF08264 Anticodon-binding domain of tRNA NYR91_14910 PF14074 Protein of unknown function (DUF4257) NYR91_14915 PF13426 PAS domain NYR91_14915 PF01740 STAS domain NYR91_14920 PF07690 Major Facilitator Superfamily NYR91_14925 PF04791 LMBR1-like membrane protein NYR91_14930 PF02687 FtsX-like permease family NYR91_14935 PF00005 ABC transporter NYR91_14940 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NYR91_14945 PF00486 Transcriptional regulatory protein, C terminal NYR91_14945 PF00072 Response regulator receiver domain NYR91_14950 PF02687 FtsX-like permease family NYR91_14950 PF12704 MacB-like periplasmic core domain NYR91_14955 PF00005 ABC transporter NYR91_14970 PF00005 ABC transporter NYR91_14975 PF00392 Bacterial regulatory proteins, gntR family NYR91_14985 PF10732 Protein of unknown function (DUF2524) NYR91_14990 PF04055 Radical SAM superfamily NYR91_14990 PF16199 Radical_SAM C-terminal domain NYR91_14995 PF06962 Putative rRNA methylase NYR91_15000 PF10776 Protein of unknown function (DUF2600) NYR91_15005 PF12146 Serine aminopeptidase, S33 NYR91_15010 PF00132 Bacterial transferase hexapeptide (six repeats) NYR91_15015 PF00324 Amino acid permease NYR91_15020 PF13537 Glutamine amidotransferase domain NYR91_15020 PF00733 Asparagine synthase NYR91_15025 PF00438 S-adenosylmethionine synthetase, N-terminal domain NYR91_15025 PF02772 S-adenosylmethionine synthetase, central domain NYR91_15025 PF02773 S-adenosylmethionine synthetase, C-terminal domain NYR91_15030 PF01293 Phosphoenolpyruvate carboxykinase NYR91_15035 PF10763 Protein of unknown function (DUF2584) NYR91_15040 PF00326 Prolyl oligopeptidase family NYR91_15050 PF00005 ABC transporter NYR91_15055 PF00528 Binding-protein-dependent transport system inner membrane component NYR91_15060 PF00293 NUDIX domain NYR91_15065 PF05105 Bacteriophage holin family NYR91_15070 PF00210 Ferritin-like domain NYR91_15080 PF13115 YtkA-like NYR91_15085 PF02664 S-Ribosylhomocysteinase (LuxS) NYR91_15090 PF01809 Putative membrane protein insertion efficiency factor NYR91_15095 PF00484 Carbonic anhydrase NYR91_15100 PF01197 Ribosomal protein L31 NYR91_15105 PF01654 Cytochrome bd terminal oxidase subunit I NYR91_15110 PF02322 Cytochrome bd terminal oxidase subunit II NYR91_15115 PF07561 Domain of Unknown Function (DUF1540) NYR91_15120 PF00950 ABC 3 transport family NYR91_15125 PF00950 ABC 3 transport family NYR91_15130 PF00005 ABC transporter NYR91_15135 PF01297 Zinc-uptake complex component A periplasmic NYR91_15140 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain NYR91_15140 PF13378 Enolase C-terminal domain-like NYR91_15145 PF00501 AMP-binding enzyme NYR91_15145 PF13193 AMP-binding enzyme C-terminal domain NYR91_15150 PF00378 Enoyl-CoA hydratase/isomerase NYR91_15155 PF00561 alpha/beta hydrolase fold NYR91_15160 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain NYR91_15160 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain NYR91_15160 PF16582 Middle domain of thiamine pyrophosphate NYR91_15165 PF00425 chorismate binding enzyme NYR91_15170 PF01258 Prokaryotic dksA/traR C4-type zinc finger NYR91_15175 PF00483 Nucleotidyl transferase NYR91_15180 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain NYR91_15180 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain NYR91_15180 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain NYR91_15185 PF01370 NAD dependent epimerase/dehydratase family NYR91_15190 PF00534 Glycosyl transferases group 1 NYR91_15190 PF13439 Glycosyltransferase Family 4 NYR91_15205 PF00534 Glycosyl transferases group 1 NYR91_15205 PF13439 Glycosyltransferase Family 4 NYR91_15210 PF01636 Phosphotransferase enzyme family NYR91_15215 PF03073 TspO/MBR family NYR91_15220 PF00343 Carbohydrate phosphorylase NYR91_15225 PF08323 Starch synthase catalytic domain NYR91_15225 PF00534 Glycosyl transferases group 1 NYR91_15230 PF00483 Nucleotidyl transferase NYR91_15235 PF00483 Nucleotidyl transferase NYR91_15240 PF00128 Alpha amylase, catalytic domain NYR91_15240 PF02806 Alpha amylase, C-terminal all-beta domain NYR91_15240 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) NYR91_15365 PF09515 Thiamine transporter protein (Thia_YuaJ) NYR91_15370 PF00583 Acetyltransferase (GNAT) family NYR91_15375 PF01145 SPFH domain / Band 7 family NYR91_15375 PF15975 Flotillin NYR91_15385 PF12867 DinB superfamily NYR91_15395 PF00465 Iron-containing alcohol dehydrogenase NYR91_15400 PF00171 Aldehyde dehydrogenase family NYR91_15410 PF17735 Biofilm surface layer A NYR91_15415 PF02254 TrkA-N domain NYR91_15415 PF02080 TrkA-C domain NYR91_15420 PF02386 Cation transport protein NYR91_15425 PF05360 yiaA/B two helix domain NYR91_15430 PF13457 GW (Gly-Tryp) dipeptide domain NYR91_15430 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase NYR91_15435 PF07690 Major Facilitator Superfamily NYR91_15440 PF05995 Cysteine dioxygenase type I NYR91_15450 PF02673 Bacitracin resistance protein BacA NYR91_15455 PF01594 AI-2E family transporter NYR91_15460 PF01408 Oxidoreductase family, NAD-binding Rossmann fold NYR91_15460 PF02894 Oxidoreductase family, C-terminal alpha/beta domain NYR91_15465 PF06134 L-rhamnose isomerase (RhaA) NYR91_15470 PF05336 L-rhamnose mutarotase NYR91_15475 PF02782 FGGY family of carbohydrate kinases, C-terminal domain NYR91_15475 PF00370 FGGY family of carbohydrate kinases, N-terminal domain NYR91_15480 PF08220 DeoR-like helix-turn-helix domain NYR91_15480 PF00455 DeoR C terminal sensor domain NYR91_15485 PF00596 Class II Aldolase and Adducin N-terminal domain NYR91_15490 PF00672 HAMP domain NYR91_15490 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NYR91_15490 PF02743 Cache domain NYR91_15495 PF02743 Cache domain NYR91_15495 PF00672 HAMP domain NYR91_15495 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NYR91_15500 PF02743 Cache domain NYR91_15500 PF00672 HAMP domain NYR91_15500 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NYR91_15505 PF02743 Cache domain NYR91_15505 PF00672 HAMP domain NYR91_15505 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NYR91_15520 PF01894 Uncharacterised protein family UPF0047 NYR91_15525 PF16657 Maltogenic Amylase, C-terminal domain NYR91_15525 PF00128 Alpha amylase, catalytic domain NYR91_15530 PF00571 CBS domain NYR91_15530 PF03471 Transporter associated domain NYR91_15530 PF01595 Cyclin M transmembrane N-terminal domain NYR91_15535 PF04298 Putative neutral zinc metallopeptidase NYR91_15545 PF11458 Membrane-integrating protein Mistic NYR91_15550 PF02254 TrkA-N domain NYR91_15550 PF07885 Ion channel NYR91_15555 PF08868 YugN-like family NYR91_15565 PF00342 Phosphoglucose isomerase NYR91_15570 PF00465 Iron-containing alcohol dehydrogenase NYR91_15575 PF00465 Iron-containing alcohol dehydrogenase NYR91_15580 PF04070 Domain of unknown function (DUF378) NYR91_15585 PF00575 S1 RNA binding domain NYR91_15590 PF00155 Aminotransferase class I and II NYR91_15595 PF01037 Lrp/AsnC ligand binding domain NYR91_15600 PF08386 TAP-like protein NYR91_15600 PF00561 alpha/beta hydrolase fold NYR91_15605 PF08958 Domain of unknown function (DUF1871) NYR91_15610 PF00155 Aminotransferase class I and II NYR91_15615 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NYR91_15615 PF00512 His Kinase A (phospho-acceptor) domain NYR91_15620 PF08810 Kinase associated protein B NYR91_15625 PF00929 Exonuclease NYR91_15635 PF07690 Major Facilitator Superfamily NYR91_15640 PF00912 Transglycosylase NYR91_15640 PF00905 Penicillin binding protein transpeptidase domain NYR91_15645 PF04134 Protein of unknown function, DUF393 NYR91_15650 PF17328 Family of unknown function (DUF5366) NYR91_15655 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NYR91_15655 PF00989 PAS fold NYR91_15655 PF17203 Single cache domain 3 NYR91_15655 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain NYR91_15660 PF00072 Response regulator receiver domain NYR91_15665 PF02608 ABC transporter substrate-binding protein PnrA-like NYR91_15670 PF00005 ABC transporter NYR91_15675 PF02653 Branched-chain amino acid transport system / permease component NYR91_15680 PF02653 Branched-chain amino acid transport system / permease component NYR91_15685 PF03390 2-hydroxycarboxylate transporter family NYR91_15695 PF00361 Proton-conducting membrane transporter NYR91_15695 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus NYR91_15695 PF13244 Domain of unknown function (DUF4040) NYR91_15700 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter NYR91_15705 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L NYR91_15710 PF00361 Proton-conducting membrane transporter NYR91_15715 PF01899 Na+/H+ ion antiporter subunit NYR91_15720 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) NYR91_15725 PF03334 Na+/H+ antiporter subunit NYR91_15730 PF03061 Thioesterase superfamily NYR91_15735 PF00072 Response regulator receiver domain NYR91_15735 PF00196 Bacterial regulatory proteins, luxR family NYR91_15740 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NYR91_15740 PF07730 Histidine kinase NYR91_15750 PF00348 Polyprenyl synthetase NYR91_15755 PF08181 DegQ (SacQ) family NYR91_15770 PF00563 EAL domain NYR91_15770 PF08668 HDOD domain NYR91_15775 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family NYR91_15775 PF17956 Nicotinate phosphoribosyltransferase C-terminal domain NYR91_15775 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain NYR91_15780 PF00857 Isochorismatase family NYR91_15785 PF07997 Protein of unknown function (DUF1694) NYR91_15790 PF14166 YueH-like protein NYR91_15795 PF10676 Spore germination protein gerPA/gerPF NYR91_15800 PF01594 AI-2E family transporter NYR91_15805 PF10049 Protein of unknown function (DUF2283) NYR91_15810 PF10842 Protein of unknown function (DUF2642) NYR91_15815 PF01966 HD domain NYR91_15820 PF00106 short chain dehydrogenase NYR91_15825 PF17355 Family of unknown function (DUF5383) NYR91_15835 PF01580 FtsK/SpoIIIE family NYR91_15835 PF12538 DNA transporter NYR91_15840 PF10140 WXG100 protein secretion system (Wss), protein YukC NYR91_15845 PF08817 WXG100 protein secretion system (Wss), protein YukD NYR91_15850 PF06013 Proteins of 100 residues with WXG NYR91_15855 PF06018 CodY GAF-like domain NYR91_15855 PF13556 PucR C-terminal helix-turn-helix domain NYR91_15855 PF17853 GGDEF-like domain NYR91_15860 PF05222 Alanine dehydrogenase/PNT, N-terminal domain NYR91_15860 PF01262 Alanine dehydrogenase/PNT, C-terminal domain NYR91_15865 PF10042 Uncharacterized conserved protein (DUF2278) NYR91_15870 PF03621 MbtH-like protein NYR91_15875 PF13193 AMP-binding enzyme C-terminal domain NYR91_15875 PF00975 Thioesterase domain NYR91_15875 PF00550 Phosphopantetheine attachment site NYR91_15875 PF00668 Condensation domain NYR91_15875 PF00501 AMP-binding enzyme NYR91_15880 PF00550 Phosphopantetheine attachment site NYR91_15880 PF00857 Isochorismatase family NYR91_15885 PF13193 AMP-binding enzyme C-terminal domain NYR91_15885 PF00501 AMP-binding enzyme NYR91_15890 PF00425 chorismate binding enzyme NYR91_15895 PF00106 short chain dehydrogenase NYR91_15900 PF00756 Putative esterase NYR91_15905 PF00174 Oxidoreductase molybdopterin binding domain NYR91_15910 PF02632 BioY family NYR91_15915 PF03553 Na+/H+ antiporter family NYR91_15915 PF13726 Na+-H+ antiporter family NYR91_15920 PF02789 Cytosol aminopeptidase family, N-terminal domain NYR91_15920 PF00883 Cytosol aminopeptidase family, catalytic domain NYR91_15925 PF02681 Divergent PAP2 family NYR91_15930 PF06725 3D domain NYR91_15935 PF14068 Putative membrane protein NYR91_15940 PF17302 Family of unknown function (DUF5351) NYR91_15945 PF07992 Pyridine nucleotide-disulphide oxidoreductase NYR91_15950 PF07992 Pyridine nucleotide-disulphide oxidoreductase NYR91_15960 PF00478 IMP dehydrogenase / GMP reductase domain NYR91_15975 PF00005 ABC transporter NYR91_15985 PF09221 Bacteriocin class IId cyclical uberolysin-like NYR91_15995 PF04299 Putative FMN-binding domain NYR91_16000 PF00583 Acetyltransferase (GNAT) family NYR91_16005 PF01521 Iron-sulphur cluster biosynthesis NYR91_16010 PF01678 Diaminopimelate epimerase NYR91_16015 PF01773 Na+ dependent nucleoside transporter N-terminus NYR91_16015 PF07662 Na+ dependent nucleoside transporter C-terminus NYR91_16020 PF07293 Protein of unknown function (DUF1450) NYR91_16025 PF07992 Pyridine nucleotide-disulphide oxidoreductase NYR91_16030 PF07315 Protein of unknown function (DUF1462) NYR91_16035 PF01106 NifU-like domain NYR91_16040 PF00326 Prolyl oligopeptidase family NYR91_16040 PF07676 WD40-like Beta Propeller Repeat NYR91_16045 PF08544 GHMP kinases C terminal NYR91_16045 PF00288 GHMP kinases N terminal domain NYR91_16050 PF00291 Pyridoxal-phosphate dependent enzyme NYR91_16055 PF03447 Homoserine dehydrogenase, NAD binding domain NYR91_16055 PF00742 Homoserine dehydrogenase NYR91_16055 PF01842 ACT domain NYR91_16065 PF04608 Phosphatidylglycerophosphatase A NYR91_16070 PF13344 Haloacid dehalogenase-like hydrolase NYR91_16075 PF01934 Protein of unknown function DUF86 NYR91_16080 PF06265 Protein of unknown function (DUF1027) NYR91_16085 PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) NYR91_16090 PF04055 Radical SAM superfamily NYR91_16090 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family NYR91_16095 PF01551 Peptidase family M23 NYR91_16100 PF09560 Sporulation protein YunB (Spo_YunB) NYR91_16105 PF08827 Domain of unknown function (DUF1805) NYR91_16110 PF02872 5'-nucleotidase, C-terminal domain NYR91_16115 PF01925 Sulfite exporter TauE/SafE NYR91_16120 PF01904 Protein of unknown function DUF72 NYR91_16130 PF01979 Amidohydrolase family NYR91_16135 PF07905 Purine catabolism regulatory protein-like family NYR91_16135 PF13556 PucR C-terminal helix-turn-helix domain NYR91_16135 PF17853 GGDEF-like domain NYR91_16140 PF00860 Permease family NYR91_16145 PF00860 Permease family NYR91_16150 PF01014 Uricase NYR91_16150 PF09349 OHCU decarboxylase NYR91_16155 PF00576 HIUase/Transthyretin family NYR91_16160 PF09680 Family of unknown function NYR91_16170 PF09680 Family of unknown function NYR91_16175 PF01799 [2Fe-2S] binding domain NYR91_16175 PF00111 2Fe-2S iron-sulfur cluster binding domain NYR91_16180 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain NYR91_16180 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase NYR91_16185 PF00941 FAD binding domain in molybdopterin dehydrogenase NYR91_16190 PF12804 MobA-like NTP transferase domain NYR91_16195 PF13478 XdhC Rossmann domain NYR91_16195 PF02625 XdhC and CoxI family NYR91_16200 PF00266 Aminotransferase class-V NYR91_16205 PF01546 Peptidase family M20/M25/M40 NYR91_16215 PF04231 Endonuclease I NYR91_16220 PF17912 MalK OB fold domain NYR91_16220 PF03459 TOBE domain NYR91_16220 PF00005 ABC transporter NYR91_16225 PF07702 UTRA domain NYR91_16225 PF00392 Bacterial regulatory proteins, gntR family NYR91_16230 PF00294 pfkB family carbohydrate kinase NYR91_16235 PF00528 Binding-protein-dependent transport system inner membrane component NYR91_16240 PF00528 Binding-protein-dependent transport system inner membrane component NYR91_16245 PF01547 Bacterial extracellular solute-binding protein NYR91_16250 PF01380 SIS domain NYR91_16255 PF01541 GIY-YIG catalytic domain NYR91_16260 PF01266 FAD dependent oxidoreductase NYR91_16275 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily NYR91_16285 PF01458 Uncharacterized protein family (UPF0051) NYR91_16290 PF01592 NifU-like N terminal domain NYR91_16295 PF00266 Aminotransferase class-V NYR91_16300 PF01458 Uncharacterized protein family (UPF0051) NYR91_16305 PF00005 ABC transporter NYR91_16315 PF02627 Carboxymuconolactone decarboxylase family NYR91_16320 PF03180 NLPA lipoprotein NYR91_16325 PF00528 Binding-protein-dependent transport system inner membrane component NYR91_16330 PF00005 ABC transporter NYR91_16330 PF09383 NIL domain NYR91_16335 PF02036 SCP-2 sterol transfer family NYR91_16340 PF00085 Thioredoxin NYR91_16345 PF01751 Toprim domain NYR91_16350 PF10830 Protein of unknown function (DUF2553) NYR91_16355 PF01597 Glycine cleavage H-protein NYR91_16360 PF03960 ArsC family NYR91_16365 PF02770 Acyl-CoA dehydrogenase, middle domain NYR91_16365 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NYR91_16365 PF00441 Acyl-CoA dehydrogenase, C-terminal domain NYR91_16370 PF02803 Thiolase, C-terminal domain NYR91_16370 PF00108 Thiolase, N-terminal domain NYR91_16375 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain NYR91_16375 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain NYR91_16375 PF00378 Enoyl-CoA hydratase/isomerase NYR91_16380 PF14115 YuzL-like protein NYR91_16385 PF01619 Proline dehydrogenase NYR91_16395 PF07875 Coat F domain NYR91_16400 PF01047 MarR family NYR91_16405 PF07690 Major Facilitator Superfamily NYR91_16410 PF14552 Tautomerase enzyme NYR91_16420 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NYR91_16420 PF03466 LysR substrate binding domain NYR91_16430 PF00005 ABC transporter NYR91_16435 PF14039 YusW-like protein NYR91_16445 PF00106 short chain dehydrogenase NYR91_16450 PF00210 Ferritin-like domain NYR91_16455 PF13180 PDZ domain NYR91_16460 PF00072 Response regulator receiver domain NYR91_16460 PF00486 Transcriptional regulatory protein, C terminal NYR91_16465 PF00672 HAMP domain NYR91_16465 PF00512 His Kinase A (phospho-acceptor) domain NYR91_16465 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NYR91_16475 PF00440 Bacterial regulatory proteins, tetR family NYR91_16480 PF00206 Lyase NYR91_16480 PF10415 Fumarase C C-terminus NYR91_16485 PF13113 Protein of unknown function (DUF3970) NYR91_16490 PF03323 Bacillus/Clostridium GerA spore germination protein NYR91_16495 PF03845 Spore germination protein NYR91_16500 PF05504 Spore germination B3/ GerAC like, C-terminal NYR91_16505 PF00072 Response regulator receiver domain NYR91_16505 PF00196 Bacterial regulatory proteins, luxR family NYR91_16510 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NYR91_16510 PF00672 HAMP domain NYR91_16510 PF07730 Histidine kinase NYR91_16515 PF09922 Cell wall-active antibiotics response 4TMS YvqF NYR91_16520 PF13349 Putative adhesin NYR91_16525 PF04012 PspA/IM30 family NYR91_16535 PF07690 Major Facilitator Superfamily NYR91_16540 PF01923 Cobalamin adenosyltransferase NYR91_16545 PF00005 ABC transporter NYR91_16550 PF01032 FecCD transport family NYR91_16555 PF01497 Periplasmic binding protein NYR91_16560 PF00106 short chain dehydrogenase NYR91_16565 PF08450 SMP-30/Gluconolactonase/LRE-like region NYR91_16570 PF00512 His Kinase A (phospho-acceptor) domain NYR91_16570 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NYR91_16575 PF00072 Response regulator receiver domain NYR91_16575 PF00486 Transcriptional regulatory protein, C terminal NYR91_16585 PF04545 Sigma-70, region 4 NYR91_16590 PF12841 YvrJ protein family NYR91_16595 PF00190 Cupin NYR91_16600 PF14184 Regulatory protein YrvL NYR91_16605 PF12704 MacB-like periplasmic core domain NYR91_16605 PF02687 FtsX-like permease family NYR91_16610 PF00005 ABC transporter NYR91_16615 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion NYR91_16620 PF00005 ABC transporter NYR91_16625 PF01032 FecCD transport family NYR91_16630 PF01032 FecCD transport family NYR91_16635 PF01497 Periplasmic binding protein NYR91_16640 PF13520 Amino acid permease NYR91_16645 PF09575 Small spore protein J (Spore_SspJ) NYR91_16650 PF04307 LexA-binding, inner membrane-associated putative hydrolase NYR91_16655 PF00884 Sulfatase NYR91_16660 PF12727 PBP superfamily domain NYR91_16660 PF12728 Helix-turn-helix domain NYR91_16670 PF00528 Binding-protein-dependent transport system inner membrane component NYR91_16675 PF00248 Aldo/keto reductase family NYR91_16685 PF00999 Sodium/hydrogen exchanger family NYR91_16690 PF01077 Nitrite and sulphite reductase 4Fe-4S domain NYR91_16690 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain NYR91_16695 PF00667 FAD binding domain NYR91_16695 PF00258 Flavodoxin NYR91_16695 PF00175 Oxidoreductase NAD-binding domain NYR91_16700 PF13538 UvrD-like helicase C-terminal domain NYR91_16710 PF03458 UPF0126 domain NYR91_16715 PF02600 Disulfide bond formation protein DsbB NYR91_16720 PF13462 Thioredoxin NYR91_16725 PF00403 Heavy-metal-associated domain NYR91_16730 PF00403 Heavy-metal-associated domain NYR91_16735 PF00403 Heavy-metal-associated domain NYR91_16740 PF02583 Metal-sensitive transcriptional repressor NYR91_16745 PF01408 Oxidoreductase family, NAD-binding Rossmann fold NYR91_16745 PF02894 Oxidoreductase family, C-terminal alpha/beta domain NYR91_16750 PF02525 Flavodoxin-like fold NYR91_16760 PF17314 Family of unknown function (DUF5360) NYR91_16765 PF00893 Small Multidrug Resistance protein NYR91_16770 PF00440 Bacterial regulatory proteins, tetR family NYR91_16775 PF00106 short chain dehydrogenase NYR91_16800 PF01668 SmpB protein NYR91_16805 PF00575 S1 RNA binding domain NYR91_16805 PF00773 RNB domain NYR91_16805 PF08206 Ribonuclease B OB domain NYR91_16805 PF17876 Cold shock domain NYR91_16810 PF12146 Serine aminopeptidase, S33 NYR91_16815 PF03840 Preprotein translocase SecG subunit NYR91_16820 PF00561 alpha/beta hydrolase fold NYR91_16825 PF01381 Helix-turn-helix NYR91_16840 PF01638 HxlR-like helix-turn-helix NYR91_16845 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NYR91_16845 PF00672 HAMP domain NYR91_16845 PF12729 Four helix bundle sensory module for signal transduction NYR91_16850 PF00528 Binding-protein-dependent transport system inner membrane component NYR91_16855 PF04069 Substrate binding domain of ABC-type glycine betaine transport system NYR91_16860 PF00528 Binding-protein-dependent transport system inner membrane component NYR91_16865 PF00571 CBS domain NYR91_16865 PF00005 ABC transporter NYR91_16870 PF12802 MarR family NYR91_16875 PF00528 Binding-protein-dependent transport system inner membrane component NYR91_16880 PF04069 Substrate binding domain of ABC-type glycine betaine transport system NYR91_16885 PF00528 Binding-protein-dependent transport system inner membrane component NYR91_16890 PF00571 CBS domain NYR91_16890 PF00005 ABC transporter NYR91_16895 PF12802 MarR family NYR91_16900 PF01914 MarC family integral membrane protein NYR91_16905 PF11724 YvbH-like oligomerisation region NYR91_16905 PF08000 Bacterial PH domain NYR91_16915 PF13240 zinc-ribbon domain NYR91_16920 PF00583 Acetyltransferase (GNAT) family NYR91_16925 PF00113 Enolase, C-terminal TIM barrel domain NYR91_16925 PF03952 Enolase, N-terminal domain NYR91_16930 PF06415 BPG-independent PGAM N-terminus (iPGM_N) NYR91_16930 PF01676 Metalloenzyme superfamily NYR91_16935 PF00121 Triosephosphate isomerase NYR91_16940 PF00162 Phosphoglycerate kinase NYR91_16945 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain NYR91_16945 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain NYR91_16950 PF04198 Putative sugar-binding domain NYR91_16955 PF00083 Sugar (and other) transporter NYR91_16960 PF00392 Bacterial regulatory proteins, gntR family NYR91_16965 PF00296 Luciferase-like monooxygenase NYR91_16970 PF03466 LysR substrate binding domain NYR91_16970 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NYR91_16975 PF00892 EamA-like transporter family NYR91_16980 PF00324 Amino acid permease NYR91_16985 PF00704 Glycosyl hydrolases family 18 NYR91_16990 PF02589 LUD domain NYR91_16995 PF13183 4Fe-4S dicluster domain NYR91_16995 PF02589 LUD domain NYR91_16995 PF11870 Domain of unknown function (DUF3390) NYR91_17000 PF02754 Cysteine-rich domain NYR91_17005 PF00072 Response regulator receiver domain NYR91_17005 PF00196 Bacterial regulatory proteins, luxR family NYR91_17010 PF07730 Histidine kinase NYR91_17010 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NYR91_17020 PF00005 ABC transporter NYR91_17030 PF12697 Alpha/beta hydrolase family NYR91_17035 PF13426 PAS domain NYR91_17035 PF07228 Stage II sporulation protein E (SpoIIE) NYR91_17040 PF07745 Glycosyl hydrolase family 53 NYR91_17045 PF02449 Beta-galactosidase NYR91_17045 PF08533 Beta-galactosidase C-terminal domain NYR91_17045 PF08532 Beta-galactosidase trimerisation domain NYR91_17050 PF00528 Binding-protein-dependent transport system inner membrane component NYR91_17055 PF00528 Binding-protein-dependent transport system inner membrane component NYR91_17060 PF13416 Bacterial extracellular solute-binding protein NYR91_17065 PF00356 Bacterial regulatory proteins, lacI family NYR91_17070 PF00392 Bacterial regulatory proteins, gntR family NYR91_17070 PF07729 FCD domain NYR91_17075 PF02652 L-lactate permease NYR91_17080 PF04552 Sigma-54, DNA binding domain NYR91_17080 PF04963 Sigma-54 factor, core binding domain NYR91_17080 PF00309 Sigma-54 factor, Activator interacting domain (AID) NYR91_17085 PF09628 YvfG protein NYR91_17090 PF04230 Polysaccharide pyruvyl transferase NYR91_17095 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family NYR91_17100 PF00132 Bacterial transferase hexapeptide (six repeats) NYR91_17100 PF17836 PglD N-terminal domain NYR91_17105 PF02397 Bacterial sugar transferase NYR91_17110 PF14667 Polysaccharide biosynthesis C-terminal domain NYR91_17110 PF01943 Polysaccharide biosynthesis protein NYR91_17115 PF00535 Glycosyl transferase family 2 NYR91_17120 PF04230 Polysaccharide pyruvyl transferase NYR91_17125 PF00535 Glycosyl transferase family 2 NYR91_17135 PF00534 Glycosyl transferases group 1 NYR91_17135 PF13439 Glycosyltransferase Family 4 NYR91_17140 PF00535 Glycosyl transferase family 2 NYR91_17145 PF00534 Glycosyl transferases group 1 NYR91_17145 PF13439 Glycosyltransferase Family 4 NYR91_17150 PF02719 Polysaccharide biosynthesis protein NYR91_17155 PF13614 AAA domain NYR91_17160 PF02706 Chain length determinant protein NYR91_17165 PF08671 Anti-repressor SinI NYR91_17165 PF01381 Helix-turn-helix NYR91_17170 PF00135 Carboxylesterase family NYR91_17180 PF05870 Phenolic acid decarboxylase (PAD) NYR91_17190 PF01177 Asp/Glu/Hydantoin racemase NYR91_17195 PF00144 Beta-lactamase NYR91_17195 PF11954 Domain of unknown function (DUF3471) NYR91_17200 PF02435 Levansucrase/Invertase NYR91_17205 PF08244 Glycosyl hydrolases family 32 C terminal NYR91_17205 PF00251 Glycosyl hydrolases family 32 N-terminal domain NYR91_17210 PF13520 Amino acid permease NYR91_17215 PF00440 Bacterial regulatory proteins, tetR family NYR91_17215 PF17934 Tetracyclin repressor-like, C-terminal domain NYR91_17220 PF00893 Small Multidrug Resistance protein NYR91_17225 PF00893 Small Multidrug Resistance protein NYR91_17230 PF11553 Protein of unknown function (DUF3231) NYR91_17240 PF00574 Clp protease NYR91_17245 PF13419 Haloacid dehalogenase-like hydrolase NYR91_17250 PF16657 Maltogenic Amylase, C-terminal domain NYR91_17250 PF00128 Alpha amylase, catalytic domain NYR91_17255 PF03636 Glycosyl hydrolase family 65, N-terminal domain NYR91_17255 PF03633 Glycosyl hydrolase family 65, C-terminal domain NYR91_17255 PF03632 Glycosyl hydrolase family 65 central catalytic domain NYR91_17260 PF06691 Protein of unknown function (DUF1189) NYR91_17265 PF00528 Binding-protein-dependent transport system inner membrane component NYR91_17270 PF00528 Binding-protein-dependent transport system inner membrane component NYR91_17275 PF13416 Bacterial extracellular solute-binding protein NYR91_17280 PF02903 Alpha amylase, N-terminal ig-like domain NYR91_17280 PF00128 Alpha amylase, catalytic domain NYR91_17285 PF00356 Bacterial regulatory proteins, lacI family NYR91_17290 PF03641 Possible lysine decarboxylase NYR91_17295 PF03819 MazG nucleotide pyrophosphohydrolase domain NYR91_17300 PF01740 STAS domain NYR91_17300 PF00916 Sulfate permease family NYR91_17305 PF00484 Carbonic anhydrase NYR91_17310 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain NYR91_17310 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain NYR91_17315 PF02687 FtsX-like permease family NYR91_17320 PF00005 ABC transporter NYR91_17325 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NYR91_17330 PF00072 Response regulator receiver domain NYR91_17330 PF00486 Transcriptional regulatory protein, C terminal NYR91_17340 PF00797 N-acetyltransferase NYR91_17345 PF00381 PTS HPr component phosphorylation site NYR91_17350 PF02650 WhiA C-terminal HTH domain NYR91_17350 PF14527 WhiA LAGLIDADG-like domain NYR91_17350 PF10298 WhiA N-terminal LAGLIDADG-like domain NYR91_17355 PF01933 Uncharacterised protein family UPF0052 NYR91_17360 PF03668 P-loop ATPase protein family NYR91_17365 PF00293 NUDIX domain NYR91_17370 PF07992 Pyridine nucleotide-disulphide oxidoreductase NYR91_17375 PF00877 NlpC/P60 family NYR91_17400 PF00664 ABC transporter transmembrane region NYR91_17400 PF00005 ABC transporter NYR91_17440 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase NYR91_17440 PF01502 Phosphoribosyl-AMP cyclohydrolase NYR91_17445 PF00977 Histidine biosynthesis protein NYR91_17450 PF00977 Histidine biosynthesis protein NYR91_17455 PF00117 Glutamine amidotransferase class-I NYR91_17460 PF00475 Imidazoleglycerol-phosphate dehydratase NYR91_17465 PF00815 Histidinol dehydrogenase NYR91_17470 PF01634 ATP phosphoribosyltransferase NYR91_17475 PF13393 Histidyl-tRNA synthetase NYR91_17480 PF13529 Peptidase_C39 like family NYR91_17485 PF03211 Pectate lyase NYR91_17490 PF14602 Hexapeptide repeat of succinyl-transferase NYR91_17495 PF13419 Haloacid dehalogenase-like hydrolase NYR91_17500 PF07670 Nucleoside recognition NYR91_17505 PF01790 Prolipoprotein diacylglyceryl transferase NYR91_17510 PF02603 HPr Serine kinase N terminus NYR91_17510 PF07475 HPr Serine kinase C-terminal domain NYR91_17515 PF01979 Amidohydrolase family NYR91_17520 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase NYR91_17525 PF00392 Bacterial regulatory proteins, gntR family NYR91_17525 PF07702 UTRA domain NYR91_17530 PF00149 Calcineurin-like phosphoesterase NYR91_17540 PF04020 Mycobacterial 4 TMS phage holin, superfamily IV NYR91_17545 PF04024 PspC domain NYR91_17550 PF13349 Putative adhesin NYR91_17570 PF17760 UvrA interaction domain NYR91_17570 PF17755 UvrA DNA-binding domain NYR91_17570 PF00005 ABC transporter NYR91_17575 PF04851 Type III restriction enzyme, res subunit NYR91_17575 PF00271 Helicase conserved C-terminal domain NYR91_17575 PF17757 UvrB interaction domain NYR91_17575 PF02151 UvrB/uvrC motif NYR91_17575 PF12344 Ultra-violet resistance protein B NYR91_17580 PF09964 Uncharacterized protein conserved in bacteria (DUF2198) NYR91_17585 PF00391 PEP-utilising enzyme, mobile domain NYR91_17585 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain NYR91_17590 PF00440 Bacterial regulatory proteins, tetR family NYR91_17595 PF07690 Major Facilitator Superfamily NYR91_17600 PF17820 PDZ domain NYR91_17605 PF17423 Swarming motility protein NYR91_17610 PF17820 PDZ domain NYR91_17610 PF01471 Putative peptidoglycan binding domain NYR91_17610 PF03572 Peptidase family S41 NYR91_17615 PF02687 FtsX-like permease family NYR91_17615 PF18075 FtsX extracellular domain NYR91_17620 PF00005 ABC transporter NYR91_17625 PF13442 Cytochrome C oxidase, cbb3-type, subunit III NYR91_17630 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) NYR91_17630 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 NYR91_17640 PF07516 SecA Wing and Scaffold domain NYR91_17640 PF01043 SecA preprotein cross-linking domain NYR91_17640 PF07517 SecA DEAD-like domain NYR91_17640 PF02810 SEC-C motif NYR91_17645 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein NYR91_17645 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus NYR91_17660 PF02561 Flagellar protein FliS NYR91_17665 PF02465 Flagellar hook-associated protein 2 N-terminus NYR91_17665 PF07195 Flagellar hook-associated protein 2 C-terminus NYR91_17665 PF07196 Flagellin hook IN motif NYR91_17670 PF03646 FlaG protein NYR91_17675 PF00700 Bacterial flagellin C-terminal helical region NYR91_17675 PF00669 Bacterial flagellin N-terminal helical region NYR91_17680 PF02599 Global regulator protein family NYR91_17685 PF02623 FliW protein NYR91_17695 PF00669 Bacterial flagellin N-terminal helical region NYR91_17695 PF00700 Bacterial flagellin C-terminal helical region NYR91_17700 PF06429 Flagellar basal body rod FlgEFG protein C-terminal NYR91_17700 PF00460 Flagella basal body rod protein NYR91_17705 PF05130 FlgN protein NYR91_17710 PF04316 Anti-sigma-28 factor, FlgM NYR91_17725 PF10719 Late competence development protein ComFB NYR91_17730 PF04851 Type III restriction enzyme, res subunit NYR91_17730 PF00271 Helicase conserved C-terminal domain NYR91_17735 PF02645 Uncharacterised protein, DegV family COG1307 NYR91_17740 PF00072 Response regulator receiver domain NYR91_17740 PF00196 Bacterial regulatory proteins, luxR family NYR91_17745 PF07730 Histidine kinase NYR91_17745 PF05384 Sensor protein DegS NYR91_17745 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NYR91_17750 PF01205 Uncharacterized protein family UPF0029 NYR91_17750 PF09186 Domain of unknown function (DUF1949) NYR91_17755 PF03816 Cell envelope-related transcriptional attenuator domain NYR91_17760 PF00953 Glycosyl transferase family 4 NYR91_17770 PF00535 Glycosyl transferase family 2 NYR91_17775 PF02706 Chain length determinant protein NYR91_17780 PF04932 O-Antigen ligase NYR91_17785 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain NYR91_17785 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain NYR91_17785 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain NYR91_17790 PF00534 Glycosyl transferases group 1 NYR91_17790 PF13439 Glycosyltransferase Family 4 NYR91_17795 PF14667 Polysaccharide biosynthesis C-terminal domain NYR91_17795 PF01943 Polysaccharide biosynthesis protein NYR91_17800 PF02397 Bacterial sugar transferase NYR91_17805 PF04122 Putative cell wall binding repeat 2 NYR91_17805 PF01520 N-acetylmuramoyl-L-alanine amidase NYR91_17810 PF08486 Stage II sporulation protein NYR91_17810 PF04122 Putative cell wall binding repeat 2 NYR91_17820 PF03816 Cell envelope-related transcriptional attenuator domain NYR91_17825 PF02350 UDP-N-acetylglucosamine 2-epimerase NYR91_17830 PF00483 Nucleotidyl transferase NYR91_17835 PF00005 ABC transporter NYR91_17840 PF01061 ABC-2 type transporter NYR91_17845 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase NYR91_17850 PF00534 Glycosyl transferases group 1 NYR91_17850 PF09318 Glycosyl transferase 1 domain A NYR91_17855 PF01467 Cytidylyltransferase-like NYR91_17860 PF03808 Glycosyl transferase WecB/TagA/CpsF family NYR91_17865 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase NYR91_17875 PF05036 Sporulation related domain NYR91_17875 PF08239 Bacterial SH3 domain NYR91_17875 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase NYR91_17880 PF01238 Phosphomannose isomerase type I NYR91_17885 PF03323 Bacillus/Clostridium GerA spore germination protein NYR91_17890 PF03845 Spore germination protein NYR91_17895 PF05504 Spore germination B3/ GerAC like, C-terminal NYR91_17900 PF00083 Sugar (and other) transporter NYR91_17905 PF03816 Cell envelope-related transcriptional attenuator domain NYR91_17915 PF00877 NlpC/P60 family NYR91_17925 PF09587 Bacterial capsule synthesis protein PGA_cap NYR91_17930 PF14102 Capsule biosynthesis CapC NYR91_17935 PF08245 Mur ligase middle domain NYR91_17940 PF00356 Bacterial regulatory proteins, lacI family NYR91_17945 PF00294 pfkB family carbohydrate kinase NYR91_17950 PF05025 RbsD / FucU transport protein family NYR91_17955 PF00005 ABC transporter NYR91_17960 PF02653 Branched-chain amino acid transport system / permease component NYR91_17965 PF13407 Periplasmic binding protein domain NYR91_17970 PF08239 Bacterial SH3 domain NYR91_17975 PF13031 Protein of unknown function (DUF3892) NYR91_17980 PF02525 Flavodoxin-like fold NYR91_17985 PF03306 Alpha-acetolactate decarboxylase NYR91_17990 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain NYR91_17990 PF00205 Thiamine pyrophosphate enzyme, central domain NYR91_17990 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain NYR91_17995 PF03466 LysR substrate binding domain NYR91_17995 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NYR91_18000 PF02040 Arsenical pump membrane protein NYR91_18015 PF08757 CotH kinase protein NYR91_18025 PF01613 Flavin reductase like domain NYR91_18030 PF13789 Domain of unknown function (DUF4181) NYR91_18040 PF01037 Lrp/AsnC ligand binding domain NYR91_18040 PF13404 AsnC-type helix-turn-helix domain NYR91_18045 PF02417 Chromate transporter NYR91_18050 PF02417 Chromate transporter NYR91_18055 PF04493 Endonuclease V NYR91_18080 PF14431 YwqJ-like deaminase NYR91_18080 PF14449 Pre-toxin TG NYR91_18080 PF04740 LXG domain of WXG superfamily NYR91_18090 PF16888 Domain of unknown function (DUF5082) NYR91_18100 PF09234 Domain of unknown function (DUF1963) NYR91_18105 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain NYR91_18105 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain NYR91_18105 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain NYR91_18115 PF13614 AAA domain NYR91_18120 PF13807 G-rich domain on putative tyrosine kinase NYR91_18120 PF02706 Chain length determinant protein NYR91_18130 PF04434 SWIM zinc finger NYR91_18135 PF12419 SNF2 Helicase protein NYR91_18135 PF00271 Helicase conserved C-terminal domain NYR91_18135 PF00176 SNF2 family N-terminal domain NYR91_18145 PF00455 DeoR C terminal sensor domain NYR91_18145 PF08220 DeoR-like helix-turn-helix domain NYR91_18150 PF00436 Single-strand binding protein family NYR91_18160 PF14183 YwpF-like protein NYR91_18165 PF04203 Sortase domain NYR91_18175 PF04397 LytTr DNA-binding domain NYR91_18175 PF00072 Response regulator receiver domain NYR91_18185 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NYR91_18185 PF06580 Histidine kinase NYR91_18190 PF01741 Large-conductance mechanosensitive channel, MscL NYR91_18195 PF07977 FabA-like domain NYR91_18200 PF18801 response regulator aspartate phosphatase H, N terminal NYR91_18205 PF06429 Flagellar basal body rod FlgEFG protein C-terminal NYR91_18205 PF00460 Flagella basal body rod protein NYR91_18210 PF06429 Flagellar basal body rod FlgEFG protein C-terminal NYR91_18210 PF00460 Flagella basal body rod protein NYR91_18220 PF12116 Stage III sporulation protein D NYR91_18230 PF01047 MarR family NYR91_18235 PF07690 Major Facilitator Superfamily NYR91_18245 PF13229 Right handed beta helix region NYR91_18250 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin NYR91_18255 PF07690 Major Facilitator Superfamily NYR91_18260 PF00857 Isochorismatase family NYR91_18270 PF00909 Ammonium Transporter Family NYR91_18275 PF00543 Nitrogen regulatory protein P-II NYR91_18280 PF01569 PAP2 superfamily NYR91_18285 PF04892 VanZ like family NYR91_18290 PF01551 Peptidase family M23 NYR91_18295 PF00583 Acetyltransferase (GNAT) family NYR91_18300 PF17319 Family of unknown function (DUF5362) NYR91_18310 PF17370 Family of unknown function (DUF5392) NYR91_18315 PF13091 PLD-like domain NYR91_18315 PF13396 Phospholipase_D-nuclease N-terminal NYR91_18320 PF13411 MerR HTH family regulatory protein NYR91_18320 PF07739 TipAS antibiotic-recognition domain NYR91_18325 PF17319 Family of unknown function (DUF5362) NYR91_18330 PF13460 NAD(P)H-binding NYR91_18335 PF02082 Transcriptional regulator NYR91_18340 PF00449 Urease alpha-subunit, N-terminal domain NYR91_18340 PF01979 Amidohydrolase family NYR91_18345 PF00699 Urease beta subunit NYR91_18350 PF00547 Urease, gamma subunit NYR91_18365 PF05532 CsbD-like NYR91_18375 PF17874 MalT-like TPR region NYR91_18375 PF18801 response regulator aspartate phosphatase H, N terminal NYR91_18380 PF06463 Molybdenum Cofactor Synthesis C NYR91_18380 PF04055 Radical SAM superfamily NYR91_18385 PF02634 FdhD/NarQ family NYR91_18395 PF00092 von Willebrand factor type A domain NYR91_18405 PF00092 von Willebrand factor type A domain NYR91_18410 PF08486 Stage II sporulation protein NYR91_18415 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) NYR91_18420 PF08680 TATA-box binding NYR91_18425 PF06612 Protein of unknown function (DUF1146) NYR91_18435 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain NYR91_18435 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain NYR91_18440 PF02874 ATP synthase alpha/beta family, beta-barrel domain NYR91_18440 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain NYR91_18445 PF00231 ATP synthase NYR91_18450 PF02874 ATP synthase alpha/beta family, beta-barrel domain NYR91_18450 PF00306 ATP synthase alpha/beta chain, C terminal domain NYR91_18450 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain NYR91_18455 PF00213 ATP synthase delta (OSCP) subunit NYR91_18460 PF00430 ATP synthase B/B' CF(0) NYR91_18465 PF00137 ATP synthase subunit C NYR91_18470 PF00119 ATP synthase A chain NYR91_18475 PF03899 ATP synthase I chain NYR91_18485 PF00464 Serine hydroxymethyltransferase NYR91_18490 PF04260 Protein of unknown function (DUF436) NYR91_18495 PF02502 Ribose/Galactose Isomerase NYR91_18500 PF01451 Low molecular weight phosphotyrosine protein phosphatase NYR91_18505 PF02659 Putative manganese efflux pump NYR91_18510 PF01300 Telomere recombination NYR91_18510 PF03481 Putative GTP-binding controlling metal-binding NYR91_18520 PF09551 Stage II sporulation protein R (spore_II_R) NYR91_18525 PF17094 Uncharacterised protein family (UPF0715) NYR91_18530 PF17247 Family of unknown function (DUF5316) NYR91_18535 PF17827 PrmC N-terminal domain NYR91_18535 PF05175 Methyltransferase small domain NYR91_18540 PF00472 RF-1 domain NYR91_18540 PF03462 PCRF domain NYR91_18545 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily NYR91_18550 PF13411 MerR HTH family regulatory protein NYR91_18555 PF03547 Membrane transport protein NYR91_18560 PF00390 Malic enzyme, N-terminal domain NYR91_18560 PF03949 Malic enzyme, NAD binding domain NYR91_18565 PF00265 Thymidine kinase NYR91_18570 PF01197 Ribosomal protein L31 NYR91_18575 PF07497 Rho termination factor, RNA-binding domain NYR91_18575 PF07498 Rho termination factor, N-terminal domain NYR91_18575 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain NYR91_18585 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded NYR91_18590 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) NYR91_18595 PF00923 Transaldolase/Fructose-6-phosphate aldolase NYR91_18600 PF01116 Fructose-bisphosphate aldolase class-II NYR91_18605 PF00072 Response regulator receiver domain NYR91_18610 PF10740 Domain of unknown function (DUF2529) NYR91_18615 PF00117 Glutamine amidotransferase class-I NYR91_18615 PF06418 CTP synthase N-terminus NYR91_18620 PF05066 HB1, ASXL, restriction endonuclease HTH domain NYR91_18625 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NYR91_18625 PF02770 Acyl-CoA dehydrogenase, middle domain NYR91_18625 PF00441 Acyl-CoA dehydrogenase, C-terminal domain NYR91_18630 PF13183 4Fe-4S dicluster domain NYR91_18630 PF02754 Cysteine-rich domain NYR91_18635 PF13091 PLD-like domain NYR91_18640 PF03851 UV-endonuclease UvdE NYR91_18650 PF01872 RibD C-terminal domain NYR91_18655 PF00664 ABC transporter transmembrane region NYR91_18655 PF00005 ABC transporter NYR91_18660 PF13396 Phospholipase_D-nuclease N-terminal NYR91_18660 PF13091 PLD-like domain NYR91_18670 PF02665 Nitrate reductase gamma subunit NYR91_18675 PF02613 Nitrate reductase delta subunit NYR91_18680 PF13247 4Fe-4S dicluster domain NYR91_18680 PF14711 Respiratory nitrate reductase beta C-terminal NYR91_18685 PF00384 Molybdopterin oxidoreductase NYR91_18685 PF14710 Respiratory nitrate reductase alpha N-terminal NYR91_18685 PF01568 Molydopterin dinucleotide binding domain NYR91_18695 PF14256 YwiC-like protein NYR91_18700 PF00325 Bacterial regulatory proteins, crp family NYR91_18700 PF00027 Cyclic nucleotide-binding domain NYR91_18705 PF07690 Major Facilitator Superfamily NYR91_18710 PF03485 Arginyl tRNA synthetase N terminal domain NYR91_18710 PF05746 DALR anticodon binding domain NYR91_18710 PF00750 tRNA synthetases class I (R) NYR91_18715 PF09148 Domain of unknown function (DUF1934) NYR91_18720 PF11420 Bacteriocin subtilosin A NYR91_18730 PF05402 Coenzyme PQQ synthesis protein D (PqqD) NYR91_18730 PF04055 Radical SAM superfamily NYR91_18730 PF13186 Iron-sulfur cluster-binding domain NYR91_18740 PF00005 ABC transporter NYR91_18750 PF05193 Peptidase M16 inactive domain NYR91_18755 PF00675 Insulinase (Peptidase family M16) NYR91_18775 PF18801 response regulator aspartate phosphatase H, N terminal NYR91_18780 PF11131 Rap-phr extracellular signalling NYR91_18790 PF00491 Arginase family NYR91_18795 PF17284 Spermidine synthase tetramerisation domain NYR91_18800 PF00905 Penicillin binding protein transpeptidase domain NYR91_18800 PF00912 Transglycosylase NYR91_18810 PF08741 YwhD family NYR91_18815 PF02163 Peptidase family M50 NYR91_18820 PF01361 Tautomerase enzyme NYR91_18825 PF01047 MarR family NYR91_18830 PF02824 TGS domain NYR91_18830 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) NYR91_18830 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain NYR91_18830 PF03129 Anticodon binding domain NYR91_18835 PF07690 Major Facilitator Superfamily NYR91_18840 PF02082 Transcriptional regulator NYR91_18850 PF01966 HD domain NYR91_18855 PF07293 Protein of unknown function (DUF1450) NYR91_18865 PF00892 EamA-like transporter family NYR91_18870 PF03099 Biotin/lipoate A/B protein ligase family NYR91_18875 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NYR91_18875 PF03466 LysR substrate binding domain NYR91_18880 PF01515 Phosphate acetyl/butaryl transferase NYR91_18885 PF06778 Chlorite dismutase NYR91_18895 PF00155 Aminotransferase class I and II NYR91_18900 PF07690 Major Facilitator Superfamily NYR91_18915 PF07883 Cupin domain NYR91_18925 PF07690 Major Facilitator Superfamily NYR91_18930 PF00324 Amino acid permease NYR91_18935 PF01546 Peptidase family M20/M25/M40 NYR91_18940 PF00171 Aldehyde dehydrogenase family NYR91_18945 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase NYR91_18945 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain NYR91_18950 PF17735 Biofilm surface layer A NYR91_18955 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase NYR91_18960 PF04321 RmlD substrate binding domain NYR91_18965 PF16363 GDP-mannose 4,6 dehydratase NYR91_18970 PF00483 Nucleotidyl transferase NYR91_18975 PF04101 Glycosyltransferase family 28 C-terminal domain NYR91_18980 PF02348 Cytidylyltransferase NYR91_18985 PF03102 NeuB family NYR91_18985 PF08666 SAF domain NYR91_18990 PF00583 Acetyltransferase (GNAT) family NYR91_18995 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family NYR91_19000 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase NYR91_19005 PF00535 Glycosyl transferase family 2 NYR91_19010 PF09671 Spore coat protein (Spore_GerQ) NYR91_19015 PF04241 Protein of unknown function (DUF423) NYR91_19020 PF00860 Permease family NYR91_19025 PF17261 Family of unknown function (DUF5327) NYR91_19030 PF00171 Aldehyde dehydrogenase family NYR91_19035 PF03167 Uracil DNA glycosylase superfamily NYR91_19040 PF00535 Glycosyl transferase family 2 NYR91_19045 PF08543 Phosphomethylpyrimidine kinase NYR91_19055 PF00251 Glycosyl hydrolases family 32 N-terminal domain NYR91_19055 PF08244 Glycosyl hydrolases family 32 C terminal NYR91_19060 PF02378 Phosphotransferase system, EIIC NYR91_19060 PF00367 phosphotransferase system, EIIB NYR91_19065 PF01226 Formate/nitrite transporter NYR91_19070 PF00874 PRD domain NYR91_19070 PF03123 CAT RNA binding domain NYR91_19080 PF05922 Peptidase inhibitor I9 NYR91_19080 PF02225 PA domain NYR91_19080 PF13860 FlgD Ig-like domain NYR91_19080 PF00082 Subtilase family NYR91_19085 PF00296 Luciferase-like monooxygenase NYR91_19090 PF00881 Nitroreductase family NYR91_19095 PF01098 Cell cycle protein NYR91_19100 PF17368 Spore morphogenesis and germination YwcE NYR91_19105 PF03626 Prokaryotic Cytochrome C oxidase subunit IV NYR91_19110 PF00510 Cytochrome c oxidase subunit III NYR91_19115 PF00115 Cytochrome C and Quinol oxidase polypeptide I NYR91_19120 PF02790 Cytochrome C oxidase subunit II, transmembrane domain NYR91_19120 PF00116 Cytochrome C oxidase subunit II, periplasmic domain NYR91_19125 PF04226 Transglycosylase associated protein NYR91_19130 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain NYR91_19130 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain NYR91_19135 PF00288 GHMP kinases N terminal domain NYR91_19135 PF08544 GHMP kinases C terminal NYR91_19135 PF10509 Galactokinase galactose-binding signature NYR91_19140 PF04138 GtrA-like protein NYR91_19145 PF00440 Bacterial regulatory proteins, tetR family NYR91_19150 PF08671 Anti-repressor SinI NYR91_19155 PF04341 Protein of unknown function, DUF485 NYR91_19160 PF00474 Sodium:solute symporter family NYR91_19165 PF01323 DSBA-like thioredoxin domain NYR91_19170 PF04261 Dyp-type peroxidase family NYR91_19170 PF10518 TAT (twin-arginine translocation) pathway signal sequence NYR91_19175 PF09375 Imelysin NYR91_19180 PF03239 Iron permease FTR1 family NYR91_19185 PF02581 Thiamine monophosphate synthase NYR91_19190 PF02110 Hydroxyethylthiazole kinase family NYR91_19195 PF03466 LysR substrate binding domain NYR91_19195 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NYR91_19200 PF03788 LrgA family NYR91_19205 PF04172 LrgB-like family NYR91_19210 PF12832 MFS_1 like family NYR91_19215 PF09962 Uncharacterized conserved protein (DUF2196) NYR91_19220 PF10672 S-adenosylmethionine-dependent methyltransferase NYR91_19220 PF17785 PUA-like domain NYR91_19225 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily NYR91_19235 PF02378 Phosphotransferase system, EIIC NYR91_19240 PF00082 Subtilase family NYR91_19245 PF00367 phosphotransferase system, EIIB NYR91_19245 PF02378 Phosphotransferase system, EIIC NYR91_19250 PF00874 PRD domain NYR91_19250 PF03123 CAT RNA binding domain NYR91_19255 PF01501 Glycosyl transferase family 8 NYR91_19260 PF09529 Integral membrane protein (intg_mem_TP0381) NYR91_19265 PF01047 MarR family NYR91_19270 PF00579 tRNA synthetases class I (W and Y) NYR91_19270 PF01479 S4 domain NYR91_19275 PF04389 Peptidase family M28 NYR91_19275 PF02225 PA domain NYR91_19280 PF04607 Region found in RelA / SpoT proteins NYR91_19285 PF01040 UbiA prenyltransferase family NYR91_19295 PF12459 D-Ala-teichoic acid biosynthesis protein NYR91_19300 PF13193 AMP-binding enzyme C-terminal domain NYR91_19300 PF00501 AMP-binding enzyme NYR91_19305 PF03062 MBOAT, membrane-bound O-acyltransferase family NYR91_19310 PF00550 Phosphopantetheine attachment site NYR91_19315 PF04914 DltD protein NYR91_19320 PF00106 short chain dehydrogenase NYR91_19325 PF01063 Amino-transferase class IV NYR91_19330 PF02056 Family 4 glycosyl hydrolase NYR91_19330 PF11975 Family 4 glycosyl hydrolase C-terminal domain NYR91_19335 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit NYR91_19340 PF02378 Phosphotransferase system, EIIC NYR91_19345 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit NYR91_19350 PF08279 HTH domain NYR91_19350 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 NYR91_19350 PF00874 PRD domain NYR91_19350 PF05043 Mga helix-turn-helix domain NYR91_19360 PF02245 Methylpurine-DNA glycosylase (MPG) NYR91_19365 PF06628 Catalase-related immune-responsive NYR91_19365 PF00199 Catalase NYR91_19370 PF07690 Major Facilitator Superfamily NYR91_19375 PF12679 ABC-2 family transporter protein NYR91_19380 PF13732 Domain of unknown function (DUF4162) NYR91_19380 PF00005 ABC transporter NYR91_19385 PF13396 Phospholipase_D-nuclease N-terminal NYR91_19395 PF17280 Family of unknown function (DUF5345) NYR91_19400 PF08281 Sigma-70, region 4 NYR91_19400 PF04542 Sigma-70 region 2 NYR91_19405 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin NYR91_19410 PF01256 Carbohydrate kinase NYR91_19415 PF00005 ABC transporter NYR91_19415 PF00664 ABC transporter transmembrane region NYR91_19420 PF00664 ABC transporter transmembrane region NYR91_19420 PF00005 ABC transporter NYR91_19425 PF02322 Cytochrome bd terminal oxidase subunit II NYR91_19430 PF01654 Cytochrome bd terminal oxidase subunit I NYR91_19435 PF03390 2-hydroxycarboxylate transporter family NYR91_19440 PF01435 Peptidase family M48 NYR91_19450 PF01522 Polysaccharide deacetylase NYR91_19455 PF17912 MalK OB fold domain NYR91_19455 PF03459 TOBE domain NYR91_19455 PF00005 ABC transporter NYR91_19460 PF13556 PucR C-terminal helix-turn-helix domain NYR91_19465 PF00171 Aldehyde dehydrogenase family NYR91_19470 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) NYR91_19470 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 NYR91_19475 PF11611 Domain of unknown function (DUF4352) NYR91_19480 PF16363 GDP-mannose 4,6 dehydratase NYR91_19485 PF01161 Phosphatidylethanolamine-binding protein NYR91_19490 PF03466 LysR substrate binding domain NYR91_19490 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NYR91_19500 PF07730 Histidine kinase NYR91_19505 PF00196 Bacterial regulatory proteins, luxR family NYR91_19505 PF00072 Response regulator receiver domain NYR91_19510 PF07687 Peptidase dimerisation domain NYR91_19510 PF01546 Peptidase family M20/M25/M40 NYR91_19525 PF04525 LURP-one-related NYR91_19530 PF01717 Cobalamin-independent synthase, Catalytic domain NYR91_19535 PF01717 Cobalamin-independent synthase, Catalytic domain NYR91_19545 PF01144 Coenzyme A transferase NYR91_19550 PF01144 Coenzyme A transferase NYR91_19560 PF08241 Methyltransferase domain NYR91_19565 PF07662 Na+ dependent nucleoside transporter C-terminus NYR91_19565 PF01773 Na+ dependent nucleoside transporter N-terminus NYR91_19580 PF00199 Catalase NYR91_19580 PF06628 Catalase-related immune-responsive NYR91_19580 PF18011 C-terminal domain found in long catalases NYR91_19585 PF03600 Citrate transporter NYR91_19590 PF00722 Glycosyl hydrolases family 16 NYR91_19595 PF03123 CAT RNA binding domain NYR91_19595 PF00874 PRD domain NYR91_19605 PF11700 Vacuole effluxer Atg22 like NYR91_19610 PF00271 Helicase conserved C-terminal domain NYR91_19610 PF03880 DbpA RNA binding domain NYR91_19610 PF00270 DEAD/DEAH box helicase NYR91_19615 PF13472 GDSL-like Lipase/Acylhydrolase family NYR91_19645 PF05593 RHS Repeat NYR91_19650 PF00892 EamA-like transporter family NYR91_19655 PF00582 Universal stress protein family NYR91_19660 PF00232 Glycosyl hydrolase family 1 NYR91_19665 PF02378 Phosphotransferase system, EIIC NYR91_19665 PF00367 phosphotransferase system, EIIB NYR91_19665 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 NYR91_19670 PF18593 CdiI immunity protein NYR91_19725 PF16888 Domain of unknown function (DUF5082) NYR91_19740 PF00293 NUDIX domain NYR91_19745 PF04616 Glycosyl hydrolases family 43 NYR91_19745 PF16369 C-terminal lipocalin-like domain NYR91_19755 PF09021 HutP NYR91_19760 PF00221 Aromatic amino acid lyase NYR91_19765 PF17392 Urocanase C-terminal domain NYR91_19765 PF01175 Urocanase Rossmann-like domain NYR91_19765 PF17391 Urocanase N-terminal domain NYR91_19770 PF01979 Amidohydrolase family NYR91_19775 PF00491 Arginase family NYR91_19780 PF00324 Amino acid permease NYR91_19785 PF00591 Glycosyl transferase family, a/b domain NYR91_19785 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain NYR91_19785 PF02885 Glycosyl transferase family, helical bundle domain NYR91_19790 PF07662 Na+ dependent nucleoside transporter C-terminus NYR91_19790 PF01773 Na+ dependent nucleoside transporter N-terminus NYR91_19795 PF01791 DeoC/LacD family aldolase NYR91_19800 PF04198 Putative sugar-binding domain NYR91_19805 PF06724 Domain of Unknown Function (DUF1206) NYR91_19810 PF04346 Ethanolamine utilisation protein, EutH NYR91_19815 PF03972 MmgE/PrpD family NYR91_19820 PF07687 Peptidase dimerisation domain NYR91_19820 PF01546 Peptidase family M20/M25/M40 NYR91_19825 PF00005 ABC transporter NYR91_19830 PF00528 Binding-protein-dependent transport system inner membrane component NYR91_19835 PF00497 Bacterial extracellular solute-binding proteins, family 3 NYR91_19840 PF00583 Acetyltransferase (GNAT) family NYR91_19845 PF00296 Luciferase-like monooxygenase NYR91_19855 PF02275 Linear amide C-N hydrolases, choloylglycine hydrolase family NYR91_19870 PF11631 Protein of unknown function (DUF3255) NYR91_19890 PF01497 Periplasmic binding protein NYR91_19895 PF06486 Protein of unknown function (DUF1093) NYR91_19900 PF02687 FtsX-like permease family NYR91_19905 PF00005 ABC transporter NYR91_19910 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NYR91_19915 PF00072 Response regulator receiver domain NYR91_19915 PF00486 Transcriptional regulatory protein, C terminal NYR91_19920 PF01116 Fructose-bisphosphate aldolase class-II NYR91_19925 PF01261 Xylose isomerase-like TIM barrel NYR91_19930 PF01261 Xylose isomerase-like TIM barrel NYR91_19935 PF02894 Oxidoreductase family, C-terminal alpha/beta domain NYR91_19935 PF01408 Oxidoreductase family, NAD-binding Rossmann fold NYR91_19940 PF07690 Major Facilitator Superfamily NYR91_19945 PF01261 Xylose isomerase-like TIM barrel NYR91_19950 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain NYR91_19950 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain NYR91_19950 PF00205 Thiamine pyrophosphate enzyme, central domain NYR91_19955 PF00294 pfkB family carbohydrate kinase NYR91_19960 PF04962 KduI/IolB family NYR91_19965 PF00171 Aldehyde dehydrogenase family NYR91_19970 PF08220 DeoR-like helix-turn-helix domain NYR91_19970 PF00455 DeoR C terminal sensor domain NYR91_19975 PF00248 Aldo/keto reductase family NYR91_19985 PF10850 Protein of unknown function (DUF2653) NYR91_20000 PF00083 Sugar (and other) transporter NYR91_20005 PF00183 Hsp90 protein NYR91_20020 PF00440 Bacterial regulatory proteins, tetR family NYR91_20025 PF00171 Aldehyde dehydrogenase family NYR91_20035 PF13411 MerR HTH family regulatory protein NYR91_20040 PF06271 RDD family NYR91_20045 PF04235 Protein of unknown function (DUF418) NYR91_20050 PF07883 Cupin domain NYR91_20055 PF00440 Bacterial regulatory proteins, tetR family NYR91_20060 PF00106 short chain dehydrogenase NYR91_20065 PF01047 MarR family NYR91_20070 PF03788 LrgA family NYR91_20075 PF04172 LrgB-like family NYR91_20080 PF04230 Polysaccharide pyruvyl transferase NYR91_20085 PF02595 Glycerate kinase family NYR91_20090 PF07729 FCD domain NYR91_20090 PF00392 Bacterial regulatory proteins, gntR family NYR91_20095 PF02782 FGGY family of carbohydrate kinases, C-terminal domain NYR91_20095 PF00370 FGGY family of carbohydrate kinases, N-terminal domain NYR91_20100 PF02447 GntP family permease NYR91_20105 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain NYR91_20105 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase NYR91_20110 PF00578 AhpC/TSA family NYR91_20115 PF13192 Thioredoxin domain NYR91_20115 PF07992 Pyridine nucleotide-disulphide oxidoreductase NYR91_20120 PF00232 Glycosyl hydrolase family 1 NYR91_20125 PF02378 Phosphotransferase system, EIIC NYR91_20125 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 NYR91_20125 PF00367 phosphotransferase system, EIIB NYR91_20130 PF07702 UTRA domain NYR91_20130 PF00392 Bacterial regulatory proteins, gntR family NYR91_20145 PF00005 ABC transporter NYR91_20155 PF04055 Radical SAM superfamily NYR91_20165 PF06874 Firmicute fructose-1,6-bisphosphatase NYR91_20190 PF02590 Predicted SPOUT methyltransferase NYR91_20195 PF14116 YyzF-like protein NYR91_20205 PF08240 Alcohol dehydrogenase GroES-like domain NYR91_20205 PF00107 Zinc-binding dehydrogenase NYR91_20215 PF10852 Protein of unknown function (DUF2651) NYR91_20230 PF00583 Acetyltransferase (GNAT) family NYR91_20235 PF18801 response regulator aspartate phosphatase H, N terminal NYR91_20245 PF00491 Arginase family NYR91_20250 PF00324 Amino acid permease NYR91_20255 PF00202 Aminotransferase class-III NYR91_20260 PF13426 PAS domain NYR91_20260 PF00158 Sigma-54 interaction domain NYR91_20260 PF02954 Bacterial regulatory protein, Fis family NYR91_20275 PF13180 PDZ domain NYR91_20280 PF00753 Metallo-beta-lactamase superfamily NYR91_20285 PF09648 YycH protein NYR91_20290 PF07435 YycH protein NYR91_20295 PF13426 PAS domain NYR91_20295 PF00512 His Kinase A (phospho-acceptor) domain NYR91_20295 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NYR91_20295 PF00672 HAMP domain NYR91_20300 PF00072 Response regulator receiver domain NYR91_20300 PF00486 Transcriptional regulatory protein, C terminal NYR91_20325 PF00709 Adenylosuccinate synthetase NYR91_20330 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily NYR91_20335 PF03796 DnaB-like helicase C terminal domain NYR91_20335 PF00772 DnaB-like helicase N terminal domain NYR91_20340 PF09954 Uncharacterized protein conserved in bacteria (DUF2188) NYR91_20350 PF14174 YycC-like protein NYR91_20355 PF07690 Major Facilitator Superfamily NYR91_20360 PF13231 Dolichyl-phosphate-mannose-protein mannosyltransferase NYR91_20365 PF01281 Ribosomal protein L9, N-terminal domain NYR91_20365 PF03948 Ribosomal protein L9, C-terminal domain NYR91_20370 PF02272 DHHA1 domain NYR91_20370 PF01368 DHH family NYR91_20375 PF09991 Predicted membrane protein (DUF2232) NYR91_20385 PF07875 Coat F domain NYR91_20390 PF01638 HxlR-like helix-turn-helix NYR91_20395 PF02833 DHHA2 domain NYR91_20395 PF01368 DHH family NYR91_20405 PF07690 Major Facilitator Superfamily NYR91_20410 PF06445 GyrI-like small molecule binding domain NYR91_20410 PF13411 MerR HTH family regulatory protein NYR91_20420 PF13474 SnoaL-like domain NYR91_20425 PF00805 Pentapeptide repeats (8 copies) NYR91_20430 PF07690 Major Facilitator Superfamily NYR91_20435 PF03466 LysR substrate binding domain NYR91_20435 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NYR91_20440 PF13673 Acetyltransferase (GNAT) domain NYR91_20450 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NYR91_20450 PF03466 LysR substrate binding domain NYR91_20455 PF01810 LysE type translocator NYR91_20465 PF00753 Metallo-beta-lactamase superfamily NYR91_20470 PF01047 MarR family NYR91_20475 PF13673 Acetyltransferase (GNAT) domain NYR91_20490 PF03190 Protein of unknown function, DUF255 NYR91_20495 PF02517 CPBP intramembrane metalloprotease NYR91_20500 PF00083 Sugar (and other) transporter NYR91_20505 PF14602 Hexapeptide repeat of succinyl-transferase NYR91_20505 PF12464 Maltose acetyltransferase NYR91_20510 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily NYR91_20515 PF00356 Bacterial regulatory proteins, lacI family NYR91_20515 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family NYR91_20520 PF03372 Endonuclease/Exonuclease/phosphatase family NYR91_20525 PF01084 Ribosomal protein S18 NYR91_20530 PF00436 Single-strand binding protein family NYR91_20535 PF01250 Ribosomal protein S6 NYR91_20540 PF01926 50S ribosome-binding GTPase NYR91_20540 PF06071 Protein of unknown function (DUF933) NYR91_20545 PF04879 Molybdopterin oxidoreductase Fe4S4 domain NYR91_20545 PF00384 Molybdopterin oxidoreductase NYR91_20545 PF01568 Molydopterin dinucleotide binding domain NYR91_20550 PF06107 Bacterial protein of unknown function (DUF951) NYR91_20560 PF06866 Protein of unknown function (DUF1256) NYR91_20565 PF17762 HTH domain found in ParB protein NYR91_20565 PF02195 ParB-like nuclease domain NYR91_20570 PF13614 AAA domain NYR91_20575 PF06713 Bacterial PH domain NYR91_20580 PF17762 HTH domain found in ParB protein NYR91_20580 PF02195 ParB-like nuclease domain NYR91_20585 PF02527 rRNA small subunit methyltransferase G NYR91_20590 PF01134 Glucose inhibited division protein A NYR91_20590 PF13932 GidA associated domain NYR91_20595 PF01926 50S ribosome-binding GTPase NYR91_20595 PF12631 MnmE helical domain NYR91_20595 PF10396 GTP-binding protein TrmE N-terminus NYR91_20600 PF14804 Jag N-terminus NYR91_20600 PF01424 R3H domain NYR91_20605 PF02096 60Kd inner membrane protein NYR91_20610 PF00825 Ribonuclease P NYR91_20615 PF00468 Ribosomal protein L34