locus-tag class description C7M28_00002 PF05908 Poly-gamma-glutamate hydrolase C7M28_00003 PF02566 OsmC-like protein C7M28_00004 PF00893 Small Multidrug Resistance protein C7M28_00005 PF00893 Small Multidrug Resistance protein C7M28_00007 PF12788 YmaF family C7M28_00009 PF17209 Hfq protein C7M28_00010 PF14157 YmzC-like protein C7M28_00012 PF07972 NrdI Flavodoxin like C7M28_00013 PF00317 Ribonucleotide reductase, all-alpha domain C7M28_00013 PF08343 Ribonucleotide reductase N-terminal C7M28_00013 PF02867 Ribonucleotide reductase, barrel domain C7M28_00014 PF00268 Ribonucleotide reductase, small chain C7M28_00016 PF05036 Sporulation related domain C7M28_00016 PF01520 N-acetylmuramoyl-L-alanine amidase C7M28_00017 PF00004 ATPase family associated with various cellular activities (AAA) C7M28_00017 PF17866 AAA lid domain C7M28_00018 PF16360 GTP-binding GTPase Middle Region C7M28_00018 PF01926 50S ribosome-binding GTPase C7M28_00018 PF13167 GTP-binding GTPase N-terminal C7M28_00019 PF06838 Methionine gamma-lyase C7M28_00020 PF13411 MerR HTH family regulatory protein C7M28_00021 PF00120 Glutamine synthetase, catalytic domain C7M28_00021 PF03951 Glutamine synthetase, beta-Grasp domain C7M28_00022 PF00589 Phage integrase family C7M28_00022 PF02899 Phage integrase, N-terminal SAM-like domain C7M28_00026 PF09669 Phage regulatory protein Rha (Phage_pRha) C7M28_00026 PF03374 Phage antirepressor protein KilAC domain C7M28_00060 PF01464 Transglycosylase SLT domain C7M28_00062 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase C7M28_00062 PF13457 GW (Gly-Tryp) dipeptide domain C7M28_00063 PF12708 Pectate lyase superfamily protein C7M28_00063 PF11962 Peptidase_G2, IMC autoproteolytic cleavage domain C7M28_00067 PF03009 Glycerophosphoryl diester phosphodiesterase family C7M28_00068 PF05105 Bacteriophage holin family C7M28_00069 PF01510 N-acetylmuramoyl-L-alanine amidase C7M28_00069 PF01476 LysM domain C7M28_00069 PF01471 Putative peptidoglycan binding domain C7M28_00071 PF04740 LXG domain of WXG superfamily C7M28_00071 PF14411 A nuclease of the HNH/ENDO VII superfamily with conserved LHH C7M28_00072 PF18801 response regulator aspartate phosphatase H, N terminal C7M28_00082 PF13302 Acetyltransferase (GNAT) domain C7M28_00085 PF13443 Cro/C1-type HTH DNA-binding domain C7M28_00086 PF13021 Domain of unknown function (DUF3885) C7M28_00091 PF04616 Glycosyl hydrolases family 43 C7M28_00091 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain C7M28_00092 PF00480 ROK family C7M28_00093 PF01261 Xylose isomerase-like TIM barrel C7M28_00094 PF02782 FGGY family of carbohydrate kinases, C-terminal domain C7M28_00094 PF00370 FGGY family of carbohydrate kinases, N-terminal domain C7M28_00095 PF00565 Staphylococcal nuclease homologue C7M28_00096 PF00083 Sugar (and other) transporter C7M28_00097 PF00842 Alanine racemase, C-terminal domain C7M28_00097 PF01168 Alanine racemase, N-terminal domain C7M28_00099 PF00692 dUTPase C7M28_00103 PF00303 Thymidylate synthase C7M28_00105 PF15493 Domain of unknown function, YrpD C7M28_00106 PF14037 YoqO-like protein C7M28_00108 PF02416 mttA/Hcf106 family C7M28_00110 PF08327 Activator of Hsp90 ATPase homolog 1-like protein C7M28_00113 PF03323 Bacillus/Clostridium GerA spore germination protein C7M28_00114 PF03323 Bacillus/Clostridium GerA spore germination protein C7M28_00115 PF05504 Spore germination B3/ GerAC like, C-terminal C7M28_00117 PF13761 Domain of unknown function (DUF4166) C7M28_00118 PF14158 YndJ-like protein C7M28_00120 PF05908 Poly-gamma-glutamate hydrolase C7M28_00121 PF10710 Protein of unknown function (DUF2512) C7M28_00122 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily C7M28_00123 PF00717 Peptidase S24-like C7M28_00123 PF01726 LexA DNA binding domain C7M28_00124 PF01476 LysM domain C7M28_00125 PF00239 Resolvase, N terminal domain C7M28_00126 PF05979 Bacterial protein of unknown function (DUF896) C7M28_00127 PF00456 Transketolase, thiamine diphosphate binding domain C7M28_00127 PF02780 Transketolase, C-terminal domain C7M28_00127 PF02779 Transketolase, pyrimidine binding domain C7M28_00128 PF10747 Sporulation inhibitor of replication protein SirA C7M28_00129 PF03672 Uncharacterised protein family (UPF0154) C7M28_00130 PF09388 Spo0E like sporulation regulatory protein C7M28_00131 PF02683 Cytochrome C biogenesis protein transmembrane region C7M28_00132 PF00072 Response regulator receiver domain C7M28_00133 PF07301 Protein of unknown function (DUF1453) C7M28_00134 PF11084 Protein of unknown function (DUF2621) C7M28_00136 PF08179 Small acid-soluble spore protein P family C7M28_00138 PF00694 Aconitase C-terminal domain C7M28_00138 PF00330 Aconitase family (aconitate hydratase) C7M28_00139 PF00578 AhpC/TSA family C7M28_00140 PF13040 Fur-regulated basic protein B C7M28_00141 PF08177 Small acid-soluble spore protein N family C7M28_00143 PF03061 Thioesterase superfamily C7M28_00145 PF01521 Iron-sulphur cluster biosynthesis C7M28_00146 PF02660 Glycerol-3-phosphate acyltransferase C7M28_00147 PF13380 CoA binding domain C7M28_00148 PF01751 Toprim domain C7M28_00148 PF00204 DNA gyrase B C7M28_00148 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C7M28_00148 PF00986 DNA gyrase B subunit, carboxyl terminus C7M28_00149 PF00521 DNA gyrase/topoisomerase IV, subunit A C7M28_00149 PF03989 DNA gyrase C-terminal domain, beta-propeller C7M28_00152 PF01235 Sodium:alanine symporter family C7M28_00153 PF00942 Cellulose binding domain C7M28_00153 PF00150 Cellulase (glycosyl hydrolase family 5) C7M28_00154 PF17452 Uncharacterized YnfE-like C7M28_00155 PF17189 Glycosyl hydrolase family 30 beta sandwich domain C7M28_00156 PF04616 Glycosyl hydrolases family 43 C7M28_00156 PF03422 Carbohydrate binding module (family 6) C7M28_00157 PF04138 GtrA-like protein C7M28_00158 PF00483 Nucleotidyl transferase C7M28_00159 PF09335 SNARE associated Golgi protein C7M28_00161 PF01039 Carboxyl transferase domain C7M28_00162 PF00378 Enoyl-CoA hydratase/isomerase C7M28_00163 PF00682 HMGL-like C7M28_00164 PF00364 Biotin-requiring enzyme C7M28_00165 PF02785 Biotin carboxylase C-terminal domain C7M28_00165 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain C7M28_00165 PF00289 Biotin carboxylase, N-terminal domain C7M28_00166 PF13193 AMP-binding enzyme C-terminal domain C7M28_00166 PF00501 AMP-binding enzyme C7M28_00167 PF00441 Acyl-CoA dehydrogenase, C-terminal domain C7M28_00167 PF02770 Acyl-CoA dehydrogenase, middle domain C7M28_00167 PF02771 Acyl-CoA dehydrogenase, N-terminal domain C7M28_00168 PF02638 Glycosyl hydrolase-like 10 C7M28_00169 PF07098 Protein of unknown function (DUF1360) C7M28_00170 PF00501 AMP-binding enzyme C7M28_00170 PF13193 AMP-binding enzyme C-terminal domain C7M28_00170 PF00550 Phosphopantetheine attachment site C7M28_00170 PF00975 Thioesterase domain C7M28_00170 PF00668 Condensation domain C7M28_00171 PF00550 Phosphopantetheine attachment site C7M28_00171 PF00668 Condensation domain C7M28_00171 PF13193 AMP-binding enzyme C-terminal domain C7M28_00171 PF00501 AMP-binding enzyme C7M28_00172 PF00550 Phosphopantetheine attachment site C7M28_00172 PF00501 AMP-binding enzyme C7M28_00172 PF13193 AMP-binding enzyme C-terminal domain C7M28_00172 PF00668 Condensation domain C7M28_00173 PF13193 AMP-binding enzyme C-terminal domain C7M28_00173 PF00501 AMP-binding enzyme C7M28_00173 PF00668 Condensation domain C7M28_00173 PF00550 Phosphopantetheine attachment site C7M28_00174 PF00501 AMP-binding enzyme C7M28_00174 PF00550 Phosphopantetheine attachment site C7M28_00174 PF00668 Condensation domain C7M28_00174 PF13193 AMP-binding enzyme C-terminal domain C7M28_00175 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family C7M28_00176 PF01263 Aldose 1-epimerase C7M28_00177 PF01554 MatE C7M28_00178 PF16800 IseA DL-endopeptidase inhibitor C7M28_00180 PF00589 Phage integrase family C7M28_00181 PF12728 Helix-turn-helix domain C7M28_00183 PF03466 LysR substrate binding domain C7M28_00183 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C7M28_00184 PF08240 Alcohol dehydrogenase GroES-like domain C7M28_00184 PF00107 Zinc-binding dehydrogenase C7M28_00185 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster C7M28_00185 PF07992 Pyridine nucleotide-disulphide oxidoreductase C7M28_00186 PF01493 GXGXG motif C7M28_00186 PF01645 Conserved region in glutamate synthase C7M28_00186 PF04898 Glutamate synthase central domain C7M28_00186 PF00310 Glutamine amidotransferases class-II C7M28_00187 PF03466 LysR substrate binding domain C7M28_00187 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C7M28_00188 PF00696 Amino acid kinase family C7M28_00188 PF01472 PUA domain C7M28_00189 PF14748 Pyrroline-5-carboxylate reductase dimerisation C7M28_00189 PF03807 NADP oxidoreductase coenzyme F420-dependent C7M28_00190 PF02334 Replication terminator protein C7M28_00191 PF00106 short chain dehydrogenase C7M28_00192 PF06103 Bacterial protein of unknown function (DUF948) C7M28_00194 PF13302 Acetyltransferase (GNAT) domain C7M28_00197 PF00005 ABC transporter C7M28_00199 PF07690 Major Facilitator Superfamily C7M28_00200 PF00370 FGGY family of carbohydrate kinases, N-terminal domain C7M28_00200 PF02782 FGGY family of carbohydrate kinases, C-terminal domain C7M28_00201 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain C7M28_00201 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain C7M28_00202 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain C7M28_00202 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain C7M28_00203 PF01568 Molydopterin dinucleotide binding domain C7M28_00203 PF00384 Molybdopterin oxidoreductase C7M28_00203 PF04879 Molybdopterin oxidoreductase Fe4S4 domain C7M28_00205 PF00083 Sugar (and other) transporter C7M28_00206 PF02894 Oxidoreductase family, C-terminal alpha/beta domain C7M28_00206 PF01408 Oxidoreductase family, NAD-binding Rossmann fold C7M28_00207 PF01261 Xylose isomerase-like TIM barrel C7M28_00208 PF00356 Bacterial regulatory proteins, lacI family C7M28_00211 PF13217 Protein of unknown function (DUF4025) C7M28_00212 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C7M28_00212 PF00672 HAMP domain C7M28_00212 PF05227 CHASE3 domain C7M28_00213 PF11794 4-hydroxyphenylacetate 3-hydroxylase N terminal C7M28_00213 PF03241 4-hydroxyphenylacetate 3-hydroxylase C terminal C7M28_00214 PF03330 Lytic transglycolase C7M28_00215 PF06912 Protein of unknown function (DUF1275) C7M28_00216 PF00544 Pectate lyase C7M28_00217 PF02586 SOS response associated peptidase (SRAP) C7M28_00219 PF00190 Cupin C7M28_00220 PF16302 Domain of unknown function (DUF4944) C7M28_00223 PF04294 VanW like protein C7M28_00224 PF11188 Protein of unknown function (DUF2975) C7M28_00225 PF13443 Cro/C1-type HTH DNA-binding domain C7M28_00226 PF05675 Protein of unknown function (DUF817) C7M28_00227 PF03466 LysR substrate binding domain C7M28_00227 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C7M28_00228 PF00892 EamA-like transporter family C7M28_00230 PF01965 DJ-1/PfpI family C7M28_00232 PF11518 Protein of unknown function (DUF3221) C7M28_00234 PF00391 PEP-utilising enzyme, mobile domain C7M28_00234 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain C7M28_00235 PF00457 Glycosyl hydrolases family 11 C7M28_00239 PF02702 Osmosensitive K+ channel His kinase sensor domain C7M28_00240 PF02669 K+-transporting ATPase, c chain C7M28_00242 PF03814 Potassium-transporting ATPase A subunit C7M28_00245 PF04740 LXG domain of WXG superfamily C7M28_00245 PF14411 A nuclease of the HNH/ENDO VII superfamily with conserved LHH C7M28_00246 PF09346 SMI1 / KNR4 family (SUKH-1) C7M28_00247 PF01593 Flavin containing amine oxidoreductase C7M28_00248 PF11962 Peptidase_G2, IMC autoproteolytic cleavage domain C7M28_00248 PF12708 Pectate lyase superfamily protein C7M28_00249 PF01588 Putative tRNA binding domain C7M28_00250 PF12833 Helix-turn-helix domain C7M28_00250 PF07883 Cupin domain C7M28_00251 PF00583 Acetyltransferase (GNAT) family C7M28_00252 PF00440 Bacterial regulatory proteins, tetR family C7M28_00252 PF13305 Tetracyclin repressor-like, C-terminal domain C7M28_00253 PF00753 Metallo-beta-lactamase superfamily C7M28_00254 PF06445 GyrI-like small molecule binding domain C7M28_00255 PF13280 WYL domain C7M28_00255 PF08279 HTH domain C7M28_00257 PF01022 Bacterial regulatory protein, arsR family C7M28_00259 PF04238 Protein of unknown function (DUF420) C7M28_00260 PF18846 Bacterial archaeo-eukaryotic release factor family 5 C7M28_00262 PF17676 LD-carboxypeptidase C-terminal domain C7M28_00262 PF02016 LD-carboxypeptidase N-terminal domain C7M28_00263 PF00487 Fatty acid desaturase C7M28_00264 PF07730 Histidine kinase C7M28_00265 PF00072 Response regulator receiver domain C7M28_00265 PF00196 Bacterial regulatory proteins, luxR family C7M28_00266 PF06725 3D domain C7M28_00266 PF01476 LysM domain C7M28_00267 PF00270 DEAD/DEAH box helicase C7M28_00267 PF09382 RQC domain C7M28_00267 PF16124 RecQ zinc-binding C7M28_00267 PF00271 Helicase conserved C-terminal domain C7M28_00267 PF00570 HRDC domain C7M28_00268 PF02525 Flavodoxin-like fold C7M28_00269 PF01258 Prokaryotic dksA/traR C4-type zinc finger C7M28_00272 PF00011 Hsp20/alpha crystallin family C7M28_00275 PF08000 Bacterial PH domain C7M28_00277 PF00171 Aldehyde dehydrogenase family C7M28_00278 PF13243 Squalene-hopene cyclase C-terminal domain C7M28_00278 PF13249 Squalene-hopene cyclase N-terminal domain C7M28_00279 PF02777 Iron/manganese superoxide dismutases, C-terminal domain C7M28_00279 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain C7M28_00280 PF00209 Sodium:neurotransmitter symporter family C7M28_00281 PF01758 Sodium Bile acid symporter family C7M28_00282 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) C7M28_00282 PF02817 e3 binding domain C7M28_00282 PF00364 Biotin-requiring enzyme C7M28_00283 PF00676 Dehydrogenase E1 component C7M28_00283 PF02779 Transketolase, pyrimidine binding domain C7M28_00283 PF16870 2-oxoglutarate dehydrogenase C-terminal C7M28_00284 PF00092 von Willebrand factor type A domain C7M28_00285 PF07728 AAA domain (dynein-related subfamily) C7M28_00286 PF13627 Prokaryotic lipoprotein-attachment site C7M28_00286 PF00080 Copper/zinc superoxide dismutase (SODC) C7M28_00287 PF01476 LysM domain C7M28_00287 PF00877 NlpC/P60 family C7M28_00288 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase C7M28_00289 PF02457 DisA bacterial checkpoint controller nucleotide-binding C7M28_00289 PF10372 Bacterial membrane-spanning protein N-terminus C7M28_00291 PF01554 MatE C7M28_00292 PF01740 STAS domain C7M28_00293 PF02585 GlcNAc-PI de-N-acetylase C7M28_00294 PF08830 Protein of unknown function (DUF1806) C7M28_00296 PF00892 EamA-like transporter family C7M28_00299 PF02447 GntP family permease C7M28_00300 PF14552 Tautomerase enzyme C7M28_00301 PF01638 HxlR-like helix-turn-helix C7M28_00302 PF00881 Nitroreductase family C7M28_00303 PF01738 Dienelactone hydrolase family C7M28_00304 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily C7M28_00305 PF11755 Protein of unknown function (DUF3311) C7M28_00306 PF00474 Sodium:solute symporter family C7M28_00307 PF03572 Peptidase family S41 C7M28_00307 PF01471 Putative peptidoglycan binding domain C7M28_00307 PF17820 PDZ domain C7M28_00308 PF08241 Methyltransferase domain C7M28_00310 PF02557 D-alanyl-D-alanine carboxypeptidase C7M28_00311 PF01048 Phosphorylase superfamily C7M28_00313 PF14191 YodL-like C7M28_00314 PF01569 PAP2 superfamily C7M28_00315 PF14162 YozD-like protein C7M28_00318 PF06855 YozE SAM-like fold C7M28_00319 PF14122 YokU-like protein, putative antitoxin C7M28_00320 PF12544 Lysine-2,3-aminomutase C7M28_00321 PF00583 Acetyltransferase (GNAT) family C7M28_00322 PF01546 Peptidase family M20/M25/M40 C7M28_00322 PF07687 Peptidase dimerisation domain C7M28_00323 PF01144 Coenzyme A transferase C7M28_00324 PF01144 Coenzyme A transferase C7M28_00325 PF00202 Aminotransferase class-III C7M28_00327 PF00583 Acetyltransferase (GNAT) family C7M28_00328 PF00535 Glycosyl transferase family 2 C7M28_00331 PF12996 DUF based on E. rectale Gene description (DUF3880) C7M28_00332 PF02333 Phytase C7M28_00333 PF02719 Polysaccharide biosynthesis protein C7M28_00334 PF01641 SelR domain C7M28_00335 PF01625 Peptide methionine sulfoxide reductase C7M28_00336 PF01047 MarR family C7M28_00337 PF01554 MatE C7M28_00338 PF17431 Uncharacterized YmpT-like C7M28_00339 PF09911 Uncharacterized protein conserved in bacteria (DUF2140) C7M28_00340 PF13472 GDSL-like Lipase/Acylhydrolase family C7M28_00341 PF02630 SCO1/SenC C7M28_00342 PF10751 Protein of unknown function (DUF2535) C7M28_00343 PF00291 Pyridoxal-phosphate dependent enzyme C7M28_00343 PF00585 C-terminal regulatory domain of Threonine dehydratase C7M28_00344 PF00158 Sigma-54 interaction domain C7M28_00344 PF08461 Ribonuclease R winged-helix domain C7M28_00345 PF03006 Haemolysin-III related C7M28_00347 PF00186 Dihydrofolate reductase C7M28_00348 PF00303 Thymidylate synthase C7M28_00349 PF04608 Phosphatidylglycerophosphatase A C7M28_00350 PF14005 YpjP-like protein C7M28_00351 PF04445 Putative SAM-dependent methyltransferase C7M28_00352 PF06491 Disulphide isomerase C7M28_00353 PF00920 Dehydratase family C7M28_00354 PF08712 Scaffold protein Nfu/NifU N terminal C7M28_00354 PF13769 Virulence factor C7M28_00355 PF01966 HD domain C7M28_00356 PF00255 Glutathione peroxidase C7M28_00357 PF04204 Homoserine O-succinyltransferase C7M28_00358 PF06925 Monogalactosyldiacylglycerol (MGDG) synthase C7M28_00358 PF00534 Glycosyl transferases group 1 C7M28_00359 PF00313 'Cold-shock' DNA-binding domain C7M28_00361 PF10819 Protein of unknown function (DUF2564) C7M28_00362 PF10782 Zinc-finger C7M28_00363 PF13456 Reverse transcriptase-like C7M28_00364 PF02592 Putative vitamin uptake transporter C7M28_00365 PF13456 Reverse transcriptase-like C7M28_00367 PF01367 5'-3' exonuclease, C-terminal SAM fold C7M28_00367 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain C7M28_00369 PF10752 Protein of unknown function (DUF2533) C7M28_00370 PF00350 Dynamin family C7M28_00372 PF04140 Isoprenylcysteine carboxyl methyltransferase (ICMT) family C7M28_00373 PF00195 Chalcone and stilbene synthases, N-terminal domain C7M28_00373 PF02797 Chalcone and stilbene synthases, C-terminal domain C7M28_00374 PF00860 Permease family C7M28_00375 PF00156 Phosphoribosyl transferase domain C7M28_00376 PF02074 Carboxypeptidase Taq (M32) metallopeptidase C7M28_00377 PF03812 2-keto-3-deoxygluconate permease C7M28_00378 PF01081 KDPG and KHG aldolase C7M28_00379 PF00294 pfkB family carbohydrate kinase C7M28_00380 PF00356 Bacterial regulatory proteins, lacI family C7M28_00381 PF04962 KduI/IolB family C7M28_00383 PF13307 Helicase C-terminal domain C7M28_00385 PF01170 Putative RNA methylase family UPF0020 C7M28_00385 PF02926 THUMP domain C7M28_00386 PF05103 DivIVA protein C7M28_00387 PF06908 YspA SLOG family C7M28_00388 PF13482 RNase_H superfamily C7M28_00389 PF00270 DEAD/DEAH box helicase C7M28_00389 PF09369 Domain of unknown function (DUF1998) C7M28_00389 PF00271 Helicase conserved C-terminal domain C7M28_00390 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 C7M28_00392 PF14179 YppG-like protein C7M28_00393 PF14178 YppF-like protein C7M28_00394 PF08807 Bacterial domain of unknown function (DUF1798) C7M28_00395 PF17522 Family of unknown function (DUF5446) C7M28_00397 PF10720 Protein of unknown function (DUF2515) C7M28_00398 PF03838 Recombination protein U C7M28_00399 PF00905 Penicillin binding protein transpeptidase domain C7M28_00399 PF00912 Transglycosylase C7M28_00401 PF00730 HhH-GPD superfamily base excision DNA repair protein C7M28_00401 PF10576 Iron-sulfur binding domain of endonuclease III C7M28_00401 PF00633 Helix-hairpin-helix motif C7M28_00402 PF07261 Replication initiation and membrane attachment C7M28_00403 PF01336 OB-fold nucleic acid binding domain C7M28_00403 PF00152 tRNA synthetases class II (D, K and N) C7M28_00404 PF00155 Aminotransferase class I and II C7M28_00405 PF03413 Peptidase propeptide and YPEB domain C7M28_00405 PF17881 Domain of unknown function (DUF5590) C7M28_00406 PF14084 Protein of unknown function (DUF4264) C7M28_00407 PF04851 Type III restriction enzyme, res subunit C7M28_00407 PF13307 Helicase C-terminal domain C7M28_00407 PF00929 Exonuclease C7M28_00408 PF02261 Aspartate decarboxylase C7M28_00409 PF02569 Pantoate-beta-alanine ligase C7M28_00410 PF02548 Ketopantoate hydroxymethyltransferase C7M28_00411 PF03099 Biotin/lipoate A/B protein ligase family C7M28_00411 PF08279 HTH domain C7M28_00411 PF02237 Biotin protein ligase C terminal domain C7M28_00412 PF13735 tRNA nucleotidyltransferase domain 2 putative C7M28_00412 PF12627 Probable RNA and SrmB- binding site of polymerase A C7M28_00412 PF01743 Poly A polymerase head domain C7M28_00413 PF00534 Glycosyl transferases group 1 C7M28_00413 PF13439 Glycosyltransferase Family 4 C7M28_00414 PF02585 GlcNAc-PI de-N-acetylase C7M28_00415 PF02142 MGS-like domain C7M28_00416 PF05173 Dihydrodipicolinate reductase, C-terminus C7M28_00416 PF01113 Dihydrodipicolinate reductase, N-terminus C7M28_00417 PF03819 MazG nucleotide pyrophosphohydrolase domain C7M28_00418 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) C7M28_00418 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 C7M28_00419 PF09577 Sporulation protein YpjB (SpoYpjB) C7M28_00420 PF07187 Protein of unknown function (DUF1405) C7M28_00421 PF00032 Cytochrome b(C-terminal)/b6/petD C7M28_00421 PF13442 Cytochrome C oxidase, cbb3-type, subunit III C7M28_00422 PF00033 Cytochrome b/b6/petB C7M28_00423 PF00355 Rieske [2Fe-2S] domain C7M28_00424 PF10673 Protein of unknown function (DUF2487) C7M28_00425 PF08858 IDEAL domain C7M28_00425 PF08864 UPF0302 domain C7M28_00427 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) C7M28_00428 PF02153 Prephenate dehydrogenase C7M28_00428 PF01842 ACT domain C7M28_00429 PF00155 Aminotransferase class I and II C7M28_00430 PF00290 Tryptophan synthase alpha chain C7M28_00431 PF00291 Pyridoxal-phosphate dependent enzyme C7M28_00432 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase C7M28_00433 PF00218 Indole-3-glycerol phosphate synthase C7M28_00434 PF00591 Glycosyl transferase family, a/b domain C7M28_00434 PF02885 Glycosyl transferase family, helical bundle domain C7M28_00435 PF04715 Anthranilate synthase component I, N terminal region C7M28_00435 PF00425 chorismate binding enzyme C7M28_00436 PF07736 Chorismate mutase type I C7M28_00437 PF01761 3-dehydroquinate synthase C7M28_00438 PF01264 Chorismate synthase C7M28_00439 PF01739 CheR methyltransferase, SAM binding domain C7M28_00439 PF03705 CheR methyltransferase, all-alpha domain C7M28_00440 PF00334 Nucleoside diphosphate kinase C7M28_00441 PF00348 Polyprenyl synthetase C7M28_00442 PF01209 ubiE/COQ5 methyltransferase family C7M28_00443 PF07307 Heptaprenyl diphosphate synthase (HEPPP synthase) subunit 1 C7M28_00444 PF02081 Tryptophan RNA-binding attenuator protein C7M28_00445 PF01227 GTP cyclohydrolase I C7M28_00446 PF00216 Bacterial DNA-binding protein C7M28_00447 PF09547 Stage IV sporulation protein A (spore_IV_A) C7M28_00449 PF10966 Protein of unknown function (DUF2768) C7M28_00450 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus C7M28_00450 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus C7M28_00451 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal C7M28_00451 PF01926 50S ribosome-binding GTPase C7M28_00453 PF14045 YIEGIA protein C7M28_00455 PF14140 YpzI-like protein C7M28_00456 PF01070 FMN-dependent dehydrogenase C7M28_00457 PF00575 S1 RNA binding domain C7M28_00458 PF02224 Cytidylate kinase C7M28_00459 PF17313 Family of unknown function (DUF5359) C7M28_00460 PF07238 PilZ domain C7M28_00460 PF12945 Flagellar protein YcgR C7M28_00461 PF14620 YpeB sporulation C7M28_00461 PF03413 Peptidase propeptide and YPEB domain C7M28_00462 PF07486 Cell Wall Hydrolase C7M28_00462 PF01471 Putative peptidoglycan binding domain C7M28_00463 PF13367 PrsW family intramembrane metalloprotease C7M28_00465 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain C7M28_00465 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase C7M28_00466 PF05389 Negative regulator of genetic competence (MecA) C7M28_00467 PF00149 Calcineurin-like phosphoesterase C7M28_00468 PF10864 Protein of unknown function (DUF2663) C7M28_00469 PF01476 LysM domain C7M28_00470 PF02517 CPBP intramembrane metalloprotease C7M28_00471 PF00270 DEAD/DEAH box helicase C7M28_00471 PF00271 Helicase conserved C-terminal domain C7M28_00472 PF14493 Helix-turn-helix domain C7M28_00474 PF12822 ECF transporter, substrate-specific component C7M28_00475 PF01842 ACT domain C7M28_00475 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain C7M28_00475 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain C7M28_00476 PF01487 Type I 3-dehydroquinase C7M28_00478 PF04542 Sigma-70 region 2 C7M28_00478 PF08281 Sigma-70, region 4 C7M28_00479 PF00672 HAMP domain C7M28_00479 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C7M28_00479 PF18698 Histidine kinase sensor domain C7M28_00479 PF00512 His Kinase A (phospho-acceptor) domain C7M28_00479 PF00989 PAS fold C7M28_00480 PF00486 Transcriptional regulatory protein, C terminal C7M28_00480 PF00072 Response regulator receiver domain C7M28_00481 PF01578 Cytochrome C assembly protein C7M28_00482 PF05140 ResB-like family C7M28_00483 PF00578 AhpC/TSA family C7M28_00484 PF01479 S4 domain C7M28_00484 PF00849 RNA pseudouridylate synthase C7M28_00485 PF07670 Nucleoside recognition C7M28_00486 PF07670 Nucleoside recognition C7M28_00487 PF00768 D-alanyl-D-alanine carboxypeptidase C7M28_00487 PF07943 Penicillin-binding protein 5, C-terminal domain C7M28_00488 PF13047 Protein of unknown function (DUF3907) C7M28_00489 PF04079 Segregation and condensation complex subunit ScpB C7M28_00490 PF02616 Segregation and condensation protein ScpA C7M28_00491 PF03745 Domain of unknown function (DUF309) C7M28_00492 PF00583 Acetyltransferase (GNAT) family C7M28_00493 PF00885 6,7-dimethyl-8-ribityllumazine synthase C7M28_00494 PF00925 GTP cyclohydrolase II C7M28_00494 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase C7M28_00495 PF00677 Lumazine binding domain C7M28_00496 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region C7M28_00496 PF01872 RibD C-terminal domain C7M28_00498 PF10502 Signal peptidase, peptidase S26 C7M28_00499 PF09855 Nucleic-acid-binding protein containing Zn-ribbon domain (DUF2082) C7M28_00503 PF10676 Spore germination protein gerPA/gerPF C7M28_00504 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD C7M28_00509 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD C7M28_00510 PF06207 Protein of unknown function (DUF1002) C7M28_00511 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain C7M28_00511 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain C7M28_00512 PF03323 Bacillus/Clostridium GerA spore germination protein C7M28_00513 PF14097 Stage V sporulation protein AE1 C7M28_00514 PF03862 SpoVAC/SpoVAEB sporulation membrane protein C7M28_00515 PF07451 Stage V sporulation protein AD (SpoVAD) C7M28_00516 PF03862 SpoVAC/SpoVAEB sporulation membrane protein C7M28_00517 PF13782 Stage V sporulation protein AB C7M28_00518 PF12164 Stage V sporulation protein AA C7M28_00519 PF04539 Sigma-70 region 3 C7M28_00519 PF04545 Sigma-70, region 4 C7M28_00519 PF04542 Sigma-70 region 2 C7M28_00520 PF13581 Histidine kinase-like ATPase domain C7M28_00521 PF01740 STAS domain C7M28_00522 PF00768 D-alanyl-D-alanine carboxypeptidase C7M28_00522 PF07943 Penicillin-binding protein 5, C-terminal domain C7M28_00523 PF01048 Phosphorylase superfamily C7M28_00524 PF01676 Metalloenzyme superfamily C7M28_00525 PF02899 Phage integrase, N-terminal SAM-like domain C7M28_00525 PF00589 Phage integrase family C7M28_00526 PF14004 Protein of unknown function (DUF4227) C7M28_00527 PF01475 Ferric uptake regulator family C7M28_00528 PF01944 Stage II sporulation protein M C7M28_00530 PF03949 Malic enzyme, NAD binding domain C7M28_00530 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain C7M28_00530 PF00390 Malic enzyme, N-terminal domain C7M28_00531 PF03553 Na+/H+ antiporter family C7M28_00532 PF00206 Lyase C7M28_00532 PF10415 Fumarase C C-terminus C7M28_00533 PF17763 Glutaminase/Asparaginase C-terminal domain C7M28_00533 PF00710 Asparaginase, N-terminal C7M28_00534 PF01381 Helix-turn-helix C7M28_00536 PF00293 NUDIX domain C7M28_00537 PF13072 Mother cell inhibitor of FtsZ C7M28_00538 PF00248 Aldo/keto reductase family C7M28_00539 PF13025 Protein of unknown function (DUF3886) C7M28_00540 PF12146 Serine aminopeptidase, S33 C7M28_00541 PF10827 Protein of unknown function (DUF2552) C7M28_00542 PF01521 Iron-sulphur cluster biosynthesis C7M28_00543 PF04229 GrpB protein C7M28_00543 PF13673 Acetyltransferase (GNAT) domain C7M28_00544 PF03992 Antibiotic biosynthesis monooxygenase C7M28_00545 PF00583 Acetyltransferase (GNAT) family C7M28_00546 PF08863 YolD-like protein C7M28_00547 PF11799 impB/mucB/samB family C-terminal domain C7M28_00547 PF00817 impB/mucB/samB family C7M28_00548 PF14164 YqzH-like protein C7M28_00549 PF07690 Major Facilitator Superfamily C7M28_00552 PF00485 Phosphoribulokinase / Uridine kinase family C7M28_00553 PF00291 Pyridoxal-phosphate dependent enzyme C7M28_00554 PF00106 short chain dehydrogenase C7M28_00555 PF00753 Metallo-beta-lactamase superfamily C7M28_00556 PF14748 Pyrroline-5-carboxylate reductase dimerisation C7M28_00556 PF03807 NADP oxidoreductase coenzyme F420-dependent C7M28_00557 PF01546 Peptidase family M20/M25/M40 C7M28_00558 PF00724 NADH:flavin oxidoreductase / NADH oxidase family C7M28_00559 PF12146 Serine aminopeptidase, S33 C7M28_00560 PF00471 Ribosomal protein L33 C7M28_00561 PF12706 Beta-lactamase superfamily domain C7M28_00562 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain C7M28_00562 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain C7M28_00563 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase C7M28_00563 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain C7M28_00564 PF00817 impB/mucB/samB family C7M28_00564 PF11799 impB/mucB/samB family C-terminal domain C7M28_00564 PF11798 IMS family HHH motif C7M28_00566 PF02096 60Kd inner membrane protein C7M28_00567 PF09844 Uncharacterized conserved protein (COG2071) C7M28_00568 PF07687 Peptidase dimerisation domain C7M28_00568 PF01546 Peptidase family M20/M25/M40 C7M28_00569 PF01039 Carboxyl transferase domain C7M28_00572 PF03734 L,D-transpeptidase catalytic domain C7M28_00573 PF06081 Aromatic acid exporter family member 1 C7M28_00573 PF11728 Putative aromatic acid exporter C-terminal domain C7M28_00574 PF00005 ABC transporter C7M28_00575 PF00528 Binding-protein-dependent transport system inner membrane component C7M28_00576 PF00497 Bacterial extracellular solute-binding proteins, family 3 C7M28_00577 PF06491 Disulphide isomerase C7M28_00578 PF00781 Diacylglycerol kinase catalytic domain C7M28_00579 PF07690 Major Facilitator Superfamily C7M28_00580 PF06445 GyrI-like small molecule binding domain C7M28_00580 PF13411 MerR HTH family regulatory protein C7M28_00581 PF00364 Biotin-requiring enzyme C7M28_00581 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) C7M28_00581 PF02817 e3 binding domain C7M28_00582 PF02780 Transketolase, C-terminal domain C7M28_00582 PF02779 Transketolase, pyrimidine binding domain C7M28_00583 PF00676 Dehydrogenase E1 component C7M28_00584 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain C7M28_00584 PF07992 Pyridine nucleotide-disulphide oxidoreductase C7M28_00585 PF00871 Acetokinase family C7M28_00586 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase C7M28_00586 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain C7M28_00587 PF01515 Phosphate acetyl/butaryl transferase C7M28_00588 PF00158 Sigma-54 interaction domain C7M28_00588 PF00989 PAS fold C7M28_00588 PF02954 Bacterial regulatory protein, Fis family C7M28_00589 PF11118 Protein of unknown function (DUF2627) C7M28_00591 PF03972 MmgE/PrpD family C7M28_00592 PF00285 Citrate synthase, C-terminal domain C7M28_00593 PF02771 Acyl-CoA dehydrogenase, N-terminal domain C7M28_00593 PF02770 Acyl-CoA dehydrogenase, middle domain C7M28_00593 PF00441 Acyl-CoA dehydrogenase, C-terminal domain C7M28_00594 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain C7M28_00594 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain C7M28_00595 PF00108 Thiolase, N-terminal domain C7M28_00595 PF02803 Thiolase, C-terminal domain C7M28_00596 PF03009 Glycerophosphoryl diester phosphodiesterase family C7M28_00597 PF01520 N-acetylmuramoyl-L-alanine amidase C7M28_00599 PF00724 NADH:flavin oxidoreductase / NADH oxidase family C7M28_00601 PF08769 Sporulation initiation factor Spo0A C terminal C7M28_00601 PF00072 Response regulator receiver domain C7M28_00602 PF05580 SpoIVB peptidase S55 C7M28_00602 PF17820 PDZ domain C7M28_00603 PF13476 AAA domain C7M28_00604 PF01316 Arginine repressor, DNA binding domain C7M28_00604 PF02863 Arginine repressor, C-terminal domain C7M28_00605 PF01728 FtsJ-like methyltransferase C7M28_00605 PF01479 S4 domain C7M28_00606 PF02780 Transketolase, C-terminal domain C7M28_00606 PF02779 Transketolase, pyrimidine binding domain C7M28_00606 PF13292 1-deoxy-D-xylulose-5-phosphate synthase C7M28_00607 PF00348 Polyprenyl synthetase C7M28_00608 PF02609 Exonuclease VII small subunit C7M28_00609 PF13742 OB-fold nucleic acid binding domain C7M28_00609 PF02601 Exonuclease VII, large subunit C7M28_00610 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain C7M28_00610 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain C7M28_00611 PF01029 NusB family C7M28_00612 PF03780 Asp23 family, cell envelope-related function C7M28_00613 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain C7M28_00613 PF02785 Biotin carboxylase C-terminal domain C7M28_00613 PF00289 Biotin carboxylase, N-terminal domain C7M28_00614 PF00364 Biotin-requiring enzyme C7M28_00615 PF12685 SpoIIIAH-like protein C7M28_00617 PF09581 Stage III sporulation protein AF (Spore_III_AF) C7M28_00618 PF09546 Stage III sporulation protein AE (spore_III_AE) C7M28_00619 PF06686 Stage III sporulation protein AC/AD protein family C7M28_00620 PF06686 Stage III sporulation protein AC/AD protein family C7M28_00621 PF09548 Stage III sporulation protein AB (spore_III_AB) C7M28_00623 PF10942 Protein of unknown function (DUF2619) C7M28_00624 PF09285 Elongation factor P, C-terminal C7M28_00624 PF08207 Elongation factor P (EF-P) KOW-like domain C7M28_00624 PF01132 Elongation factor P (EF-P) OB domain C7M28_00625 PF00557 Metallopeptidase family M24 C7M28_00625 PF01321 Creatinase/Prolidase N-terminal domain C7M28_00626 PF01220 Dehydroquinase class II C7M28_00627 PF11085 Conserved membrane protein YqhR C7M28_00628 PF07136 Protein of unknown function (DUF1385) C7M28_00630 PF01734 Patatin-like phospholipase C7M28_00631 PF02742 Iron dependent repressor, metal binding and dimerisation domain C7M28_00631 PF01325 Iron dependent repressor, N-terminal DNA binding domain C7M28_00632 PF03099 Biotin/lipoate A/B protein ligase family C7M28_00633 PF00581 Rhodanese-like domain C7M28_00634 PF02347 Glycine cleavage system P-protein C7M28_00635 PF02347 Glycine cleavage system P-protein C7M28_00636 PF08669 Glycine cleavage T-protein C-terminal barrel domain C7M28_00636 PF01571 Aminomethyltransferase folate-binding domain C7M28_00637 PF00271 Helicase conserved C-terminal domain C7M28_00637 PF00176 SNF2 family N-terminal domain C7M28_00638 PF11079 Bacterial protein YqhG of unknown function C7M28_00639 PF08671 Anti-repressor SinI C7M28_00640 PF08671 Anti-repressor SinI C7M28_00640 PF01381 Helix-turn-helix C7M28_00641 PF12389 Camelysin metallo-endopeptidase C7M28_00644 PF13028 Protein of unknown function (DUF3889) C7M28_00645 PF14038 YqzE-like protein C7M28_00646 PF14173 ComG operon protein 7 C7M28_00647 PF15980 Putative Competence protein ComGF C7M28_00649 PF07963 Prokaryotic N-terminal methylation motif C7M28_00650 PF07963 Prokaryotic N-terminal methylation motif C7M28_00651 PF00482 Type II secretion system (T2SS), protein F C7M28_00652 PF00437 Type II/IV secretion system protein C7M28_00653 PF00571 CBS domain C7M28_00654 PF01544 CorA-like Mg2+ transporter protein C7M28_00655 PF00571 CBS domain C7M28_00655 PF03471 Transporter associated domain C7M28_00655 PF01595 Cyclin M transmembrane N-terminal domain C7M28_00656 PF14361 RsbT co-antagonist protein rsbRD N-terminal domain C7M28_00656 PF01740 STAS domain C7M28_00658 PF03960 ArsC family C7M28_00659 PF11117 Protein of unknown function (DUF2626) C7M28_00660 PF00753 Metallo-beta-lactamase superfamily C7M28_00661 PF10958 Protein of unknown function (DUF2759) C7M28_00662 PF01910 Thiamine-binding protein C7M28_00664 PF00246 Zinc carboxypeptidase C7M28_00665 PF00884 Sulfatase C7M28_00666 PF00480 ROK family C7M28_00667 PF06014 Bacterial protein of unknown function (DUF910) C7M28_00668 PF01694 Rhomboid family C7M28_00670 PF01812 5-formyltetrahydrofolate cyclo-ligase family C7M28_00671 PF00471 Ribosomal protein L33 C7M28_00672 PF13439 Glycosyltransferase Family 4 C7M28_00672 PF00534 Glycosyl transferases group 1 C7M28_00676 PF00005 ABC transporter C7M28_00677 PF00005 ABC transporter C7M28_00678 PF00528 Binding-protein-dependent transport system inner membrane component C7M28_00679 PF00528 Binding-protein-dependent transport system inner membrane component C7M28_00680 PF12849 PBP superfamily domain C7M28_00682 PF07690 Major Facilitator Superfamily C7M28_00683 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain C7M28_00683 PF02777 Iron/manganese superoxide dismutases, C-terminal domain C7M28_00684 PF04306 Protein of unknown function (DUF456) C7M28_00685 PF06691 Protein of unknown function (DUF1189) C7M28_00687 PF04551 GcpE protein C7M28_00690 PF01475 Ferric uptake regulator family C7M28_00691 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) C7M28_00691 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 C7M28_00692 PF11116 Protein of unknown function (DUF2624) C7M28_00693 PF01261 Xylose isomerase-like TIM barrel C7M28_00694 PF00270 DEAD/DEAH box helicase C7M28_00694 PF00271 Helicase conserved C-terminal domain C7M28_00695 PF14181 YqfQ-like protein C7M28_00696 PF02401 LytB protein C7M28_00697 PF01784 NIF3 (NGG1p interacting factor 3) C7M28_00698 PF04816 tRNA (adenine(22)-N(1))-methyltransferase C7M28_00699 PF13442 Cytochrome C oxidase, cbb3-type, subunit III C7M28_00700 PF04539 Sigma-70 region 3 C7M28_00700 PF00140 Sigma-70 factor, region 1.2 C7M28_00700 PF04542 Sigma-70 region 2 C7M28_00700 PF04545 Sigma-70, region 4 C7M28_00700 PF03979 Sigma-70 factor, region 1.1 C7M28_00701 PF08275 DNA primase catalytic core, N-terminal domain C7M28_00701 PF10410 DnaB-helicase binding domain of primase C7M28_00701 PF01807 CHC2 zinc finger C7M28_00702 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 C7M28_00703 PF03618 Kinase/pyrophosphorylase C7M28_00704 PF08279 HTH domain C7M28_00704 PF00571 CBS domain C7M28_00705 PF02092 Glycyl-tRNA synthetase beta subunit C7M28_00706 PF02091 Glycyl-tRNA synthetase alpha subunit C7M28_00707 PF02565 Recombination protein O C terminal C7M28_00707 PF11967 Recombination protein O N terminal C7M28_00708 PF14006 YqzL-like protein C7M28_00709 PF07650 KH domain C7M28_00709 PF01926 50S ribosome-binding GTPase C7M28_00710 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region C7M28_00711 PF01219 Prokaryotic diacylglycerol kinase C7M28_00712 PF02130 Uncharacterized protein family UPF0054 C7M28_00713 PF01966 HD domain C7M28_00713 PF07697 7TM-HD extracellular C7M28_00713 PF07698 7TM receptor with intracellular HD hydrolase C7M28_00715 PF02562 PhoH-like protein C7M28_00716 PF06898 Putative stage IV sporulation protein YqfD C7M28_00717 PF07873 YabP family C7M28_00719 PF12127 SigmaW regulon antibacterial C7M28_00720 PF01972 Serine dehydrogenase proteinase C7M28_00720 PF01957 NfeD-like C-terminal, partner-binding C7M28_00721 PF09424 Yqey-like protein C7M28_00722 PF01165 Ribosomal protein S21 C7M28_00723 PF02690 Na+/Pi-cotransporter C7M28_00724 PF00919 Uncharacterized protein family UPF0004 C7M28_00724 PF01938 TRAM domain C7M28_00724 PF04055 Radical SAM superfamily C7M28_00725 PF04452 RNA methyltransferase C7M28_00727 PF00226 DnaJ domain C7M28_00727 PF01556 DnaJ C terminal domain C7M28_00727 PF00684 DnaJ central domain C7M28_00728 PF00012 Hsp70 protein C7M28_00729 PF01025 GrpE C7M28_00730 PF01628 HrcA protein C terminal domain C7M28_00731 PF04055 Radical SAM superfamily C7M28_00731 PF06969 HemN C-terminal domain C7M28_00732 PF00679 Elongation factor G C-terminus C7M28_00732 PF03144 Elongation factor Tu domain 2 C7M28_00732 PF06421 GTP-binding protein LepA C-terminus C7M28_00732 PF00009 Elongation factor Tu GTP binding domain C7M28_00733 PF12438 Protein of unknown function (DUF3679) C7M28_00734 PF07454 Stage II sporulation protein P (SpoIIP) C7M28_00735 PF03418 Germination protease C7M28_00736 PF01649 Ribosomal protein S20 C7M28_00737 PF06144 DNA polymerase III, delta subunit C7M28_00738 PF14141 YqzM-like protein C7M28_00739 PF00753 Metallo-beta-lactamase superfamily C7M28_00739 PF13567 Domain of unknown function (DUF4131) C7M28_00739 PF03772 Competence protein C7M28_00740 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region C7M28_00741 PF10531 SLBB domain C7M28_00742 PF03807 NADP oxidoreductase coenzyme F420-dependent C7M28_00742 PF14748 Pyrroline-5-carboxylate reductase dimerisation C7M28_00743 PF13649 Methyltransferase domain C7M28_00745 PF01966 HD domain C7M28_00746 PF01467 Cytidylyltransferase-like C7M28_00747 PF01985 CRS1 / YhbY (CRM) domain C7M28_00748 PF01488 Shikimate / quinate 5-dehydrogenase C7M28_00748 PF18317 Shikimate 5'-dehydrogenase C-terminal domain C7M28_00748 PF08501 Shikimate dehydrogenase substrate binding domain C7M28_00749 PF01926 50S ribosome-binding GTPase C7M28_00752 PF00657 GDSL-like Lipase/Acylhydrolase C7M28_00753 PF01510 N-acetylmuramoyl-L-alanine amidase C7M28_00753 PF01471 Putative peptidoglycan binding domain C7M28_00754 PF09335 SNARE associated Golgi protein C7M28_00755 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain C7M28_00755 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase C7M28_00757 PF14040 Deoxyribonuclease NucA/NucB C7M28_00758 PF04542 Sigma-70 region 2 C7M28_00758 PF04545 Sigma-70, region 4 C7M28_00759 PF02909 Tetracyclin repressor-like, C-terminal domain C7M28_00759 PF00440 Bacterial regulatory proteins, tetR family C7M28_00760 PF01554 MatE C7M28_00761 PF02156 Glycosyl hydrolase family 26 C7M28_00762 PF01925 Sulfite exporter TauE/SafE C7M28_00763 PF01206 Sulfurtransferase TusA C7M28_00764 PF00581 Rhodanese-like domain C7M28_00764 PF00753 Metallo-beta-lactamase superfamily C7M28_00765 PF01206 Sulfurtransferase TusA C7M28_00765 PF00581 Rhodanese-like domain C7M28_00766 PF13686 DsrE/DsrF/DrsH-like family C7M28_00767 PF02583 Metal-sensitive transcriptional repressor C7M28_00768 PF07883 Cupin domain C7M28_00769 PF06445 GyrI-like small molecule binding domain C7M28_00769 PF13411 MerR HTH family regulatory protein C7M28_00770 PF07690 Major Facilitator Superfamily C7M28_00771 PF00583 Acetyltransferase (GNAT) family C7M28_00772 PF01595 Cyclin M transmembrane N-terminal domain C7M28_00772 PF00571 CBS domain C7M28_00772 PF03471 Transporter associated domain C7M28_00773 PF14142 YrzO-like protein C7M28_00774 PF00892 EamA-like transporter family C7M28_00775 PF03466 LysR substrate binding domain C7M28_00775 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C7M28_00777 PF01545 Cation efflux family C7M28_00777 PF16916 Dimerisation domain of Zinc Transporter C7M28_00778 PF14552 Tautomerase enzyme C7M28_00779 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C7M28_00779 PF03466 LysR substrate binding domain C7M28_00780 PF05525 Branched-chain amino acid transport protein C7M28_00781 PF05437 Branched-chain amino acid transport protein (AzlD) C7M28_00782 PF03591 AzlC protein C7M28_00783 PF01037 Lrp/AsnC ligand binding domain C7M28_00784 PF01337 Barstar (barnase inhibitor) C7M28_00785 PF00857 Isochorismatase family C7M28_00786 PF10823 Protein of unknown function (DUF2568) C7M28_00787 PF05163 DinB family C7M28_00788 PF04439 Streptomycin adenylyltransferase C7M28_00789 PF03060 Nitronate monooxygenase C7M28_00790 PF01177 Asp/Glu/Hydantoin racemase C7M28_00791 PF15493 Domain of unknown function, YrpD C7M28_00793 PF09223 ZinT (YodA) periplasmic lipocalin-like zinc-recruitment C7M28_00794 PF08281 Sigma-70, region 4 C7M28_00794 PF04542 Sigma-70 region 2 C7M28_00795 PF00248 Aldo/keto reductase family C7M28_00796 PF03600 Citrate transporter C7M28_00797 PF03466 LysR substrate binding domain C7M28_00797 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C7M28_00798 PF04303 PrpF protein C7M28_00800 PF01374 Glycosyl hydrolase family 46 C7M28_00802 PF00561 alpha/beta hydrolase fold C7M28_00805 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily C7M28_00807 PF07875 Coat F domain C7M28_00808 PF00107 Zinc-binding dehydrogenase C7M28_00808 PF13823 Alcohol dehydrogenase GroES-associated C7M28_00808 PF08240 Alcohol dehydrogenase GroES-like domain C7M28_00810 PF07875 Coat F domain C7M28_00811 PF13411 MerR HTH family regulatory protein C7M28_00813 PF00107 Zinc-binding dehydrogenase C7M28_00813 PF08240 Alcohol dehydrogenase GroES-like domain C7M28_00814 PF01965 DJ-1/PfpI family C7M28_00815 PF00251 Glycosyl hydrolases family 32 N-terminal domain C7M28_00815 PF08244 Glycosyl hydrolases family 32 C terminal C7M28_00816 PF03613 PTS system mannose/fructose/sorbose family IID component C7M28_00817 PF03609 PTS system sorbose-specific iic component C7M28_00818 PF03830 PTS system sorbose subfamily IIB component C7M28_00819 PF03610 PTS system fructose IIA component C7M28_00820 PF03610 PTS system fructose IIA component C7M28_00820 PF00158 Sigma-54 interaction domain C7M28_00820 PF00874 PRD domain C7M28_00821 PF00324 Amino acid permease C7M28_00822 PF01810 LysE type translocator C7M28_00823 PF01978 Sugar-specific transcriptional regulator TrmB C7M28_00823 PF11495 Archaeal transcriptional regulator TrmB C7M28_00824 PF04542 Sigma-70 region 2 C7M28_00824 PF08281 Sigma-70, region 4 C7M28_00825 PF13739 Deacetylase PdaC C7M28_00825 PF11738 Protein of unknown function (DUF3298) C7M28_00826 PF01757 Acyltransferase family C7M28_00827 PF14145 YrhK-like protein C7M28_00831 PF01546 Peptidase family M20/M25/M40 C7M28_00831 PF07687 Peptidase dimerisation domain C7M28_00832 PF02222 ATP-grasp domain C7M28_00833 PF00221 Aromatic amino acid lyase C7M28_00834 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase C7M28_00834 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase C7M28_00835 PF00550 Phosphopantetheine attachment site C7M28_00835 PF00668 Condensation domain C7M28_00835 PF00501 AMP-binding enzyme C7M28_00835 PF00975 Thioesterase domain C7M28_00835 PF13193 AMP-binding enzyme C-terminal domain C7M28_00838 PF00005 ABC transporter C7M28_00839 PF01370 NAD dependent epimerase/dehydratase family C7M28_00840 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain C7M28_00840 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain C7M28_00840 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain C7M28_00841 PF00067 Cytochrome P450 C7M28_00841 PF00667 FAD binding domain C7M28_00841 PF00258 Flavodoxin C7M28_00841 PF00175 Oxidoreductase NAD-binding domain C7M28_00842 PF16295 Tetracyclin repressor-like, C-terminal domain C7M28_00842 PF00440 Bacterial regulatory proteins, tetR family C7M28_00843 PF08241 Methyltransferase domain C7M28_00844 PF09501 Probable sporulation protein (Bac_small_yrzI) C7M28_00846 PF01226 Formate/nitrite transporter C7M28_00847 PF10057 Uncharacterized conserved protein (DUF2294) C7M28_00848 PF04879 Molybdopterin oxidoreductase Fe4S4 domain C7M28_00848 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region C7M28_00848 PF00037 4Fe-4S binding domain C7M28_00848 PF00384 Molybdopterin oxidoreductase C7M28_00848 PF01568 Molydopterin dinucleotide binding domain C7M28_00849 PF07849 Protein of unknown function (DUF1641) C7M28_00850 PF14143 YrhC-like protein C7M28_00851 PF01053 Cys/Met metabolism PLP-dependent enzyme C7M28_00852 PF00291 Pyridoxal-phosphate dependent enzyme C7M28_00853 PF01048 Phosphorylase superfamily C7M28_00854 PF13649 Methyltransferase domain C7M28_00855 PF10750 Protein of unknown function (DUF2536) C7M28_00856 PF07423 Domain of unknown function (DUF1510) C7M28_00857 PF03717 Penicillin-binding Protein dimerisation domain C7M28_00857 PF00905 Penicillin binding protein transpeptidase domain C7M28_00858 PF03449 Transcription elongation factor, N-terminal C7M28_00858 PF01272 Transcription elongation factor, GreA/GreB, C-term C7M28_00859 PF00485 Phosphoribulokinase / Uridine kinase family C7M28_00862 PF01596 O-methyltransferase C7M28_00863 PF02618 YceG-like family C7M28_00864 PF06949 Protein of unknown function (DUF1292) C7M28_00865 PF03652 Holliday junction resolvase C7M28_00866 PF06135 IreB regulatory phosphoprotein C7M28_00867 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain C7M28_00867 PF02272 DHHA1 domain C7M28_00867 PF01411 tRNA synthetases class II (A) C7M28_00868 PF01594 AI-2E family transporter C7M28_00869 PF00005 ABC transporter C7M28_00870 PF00497 Bacterial extracellular solute-binding proteins, family 3 C7M28_00871 PF00528 Binding-protein-dependent transport system inner membrane component C7M28_00872 PF00528 Binding-protein-dependent transport system inner membrane component C7M28_00873 PF13056 Protein of unknown function (DUF3918) C7M28_00875 PF05239 PRC-barrel domain C7M28_00876 PF13538 UvrD-like helicase C-terminal domain C7M28_00876 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain C7M28_00876 PF14490 Helix-hairpin-helix containing domain C7M28_00877 PF07719 Tetratricopeptide repeat C7M28_00877 PF13181 Tetratricopeptide repeat C7M28_00879 PF00266 Aminotransferase class-V C7M28_00880 PF02082 Transcriptional regulator C7M28_00881 PF12002 MgsA AAA+ ATPase C terminal C7M28_00881 PF16193 AAA C-terminal domain C7M28_00881 PF05496 Holliday junction DNA helicase RuvB P-loop domain C7M28_00882 PF00899 ThiF family C7M28_00883 PF02938 GAD domain C7M28_00883 PF00152 tRNA synthetases class II (D, K and N) C7M28_00883 PF01336 OB-fold nucleic acid binding domain C7M28_00884 PF03129 Anticodon binding domain C7M28_00884 PF13393 Histidyl-tRNA synthetase C7M28_00885 PF17449 Uncharacterized YrzK-like C7M28_00886 PF08239 Bacterial SH3 domain C7M28_00886 PF01520 N-acetylmuramoyl-L-alanine amidase C7M28_00887 PF02580 D-Tyr-tRNA(Tyr) deacylase C7M28_00888 PF13291 ACT domain C7M28_00888 PF02824 TGS domain C7M28_00888 PF04607 Region found in RelA / SpoT proteins C7M28_00889 PF00156 Phosphoribosyl transferase domain C7M28_00890 PF01368 DHH family C7M28_00890 PF02272 DHHA1 domain C7M28_00890 PF17768 RecJ OB domain C7M28_00890 PF10141 Single-strand DNA-specific exonuclease, C terminal domain C7M28_00891 PF06305 Lipopolysaccharide assembly protein A domain C7M28_00892 PF02080 TrkA-C domain C7M28_00893 PF07549 SecD/SecF GG Motif C7M28_00893 PF02355 Protein export membrane protein C7M28_00894 PF13797 Post-transcriptional regulator C7M28_00895 PF01943 Polysaccharide biosynthesis protein C7M28_00895 PF14667 Polysaccharide biosynthesis C-terminal domain C7M28_00896 PF04239 Protein of unknown function (DUF421) C7M28_00897 PF12670 Protein of unknown function (DUF3792) C7M28_00898 PF02699 Preprotein translocase subunit C7M28_00899 PF01702 Queuine tRNA-ribosyltransferase C7M28_00900 PF02547 Queuosine biosynthesis protein C7M28_00901 PF11146 Protein of unknown function (DUF2905) C7M28_00902 PF05491 RuvB C-terminal winged helix domain C7M28_00902 PF05496 Holliday junction DNA helicase RuvB P-loop domain C7M28_00902 PF17864 RuvB AAA lid domain C7M28_00903 PF07499 RuvA, C-terminal domain C7M28_00903 PF01330 RuvA N terminal domain C7M28_00904 PF08955 BofC C-terminal domain C7M28_00904 PF08977 Bypass of Forespore C, N terminal C7M28_00905 PF07690 Major Facilitator Superfamily C7M28_00906 PF01408 Oxidoreductase family, NAD-binding Rossmann fold C7M28_00906 PF02894 Oxidoreductase family, C-terminal alpha/beta domain C7M28_00910 PF01235 Sodium:alanine symporter family C7M28_00911 PF01709 Transcriptional regulator C7M28_00912 PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) C7M28_00913 PF01476 LysM domain C7M28_00914 PF02445 Quinolinate synthetase A protein C7M28_00915 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain C7M28_00915 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain C7M28_00916 PF02910 Fumarate reductase flavoprotein C-term C7M28_00916 PF00890 FAD binding domain C7M28_00917 PF00266 Aminotransferase class-V C7M28_00918 PF08279 HTH domain C7M28_00918 PF02829 3H domain C7M28_00919 PF00800 Prephenate dehydratase C7M28_00919 PF01842 ACT domain C7M28_00920 PF01842 ACT domain C7M28_00921 PF01926 50S ribosome-binding GTPase C7M28_00921 PF01018 GTP1/OBG C7M28_00921 PF09269 Domain of unknown function (DUF1967) C7M28_00922 PF14682 Sporulation initiation phospho-transferase B, C-terminal C7M28_00922 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain C7M28_00923 PF01016 Ribosomal L27 protein C7M28_00924 PF04327 Cysteine protease Prp C7M28_00925 PF00829 Ribosomal prokaryotic L21 protein C7M28_00926 PF02163 Peptidase family M50 C7M28_00927 PF01551 Peptidase family M23 C7M28_00928 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain C7M28_00929 PF03775 Septum formation inhibitor MinC, C-terminal domain C7M28_00930 PF04093 rod shape-determining protein MreD C7M28_00931 PF04085 rod shape-determining protein MreC C7M28_00933 PF00633 Helix-hairpin-helix motif C7M28_00933 PF04002 RadC-like JAB domain C7M28_00934 PF02545 Maf-like protein C7M28_00935 PF05036 Sporulation related domain C7M28_00936 PF06750 Bacterial Peptidase A24 N-terminal domain C7M28_00936 PF01478 Type IV leader peptidase family C7M28_00937 PF02875 Mur ligase family, glutamate ligase domain C7M28_00937 PF08245 Mur ligase middle domain C7M28_00938 PF00133 tRNA synthetases class I (I, L, M and V) C7M28_00938 PF08264 Anticodon-binding domain of tRNA C7M28_00938 PF10458 Valyl tRNA synthetase tRNA binding arm C7M28_00941 PF01476 LysM domain C7M28_00942 PF00202 Aminotransferase class-III C7M28_00943 PF00490 Delta-aminolevulinic acid dehydratase C7M28_00944 PF02602 Uroporphyrinogen-III synthase HemD C7M28_00945 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain C7M28_00945 PF03900 Porphobilinogen deaminase, C-terminal domain C7M28_00946 PF01578 Cytochrome C assembly protein C7M28_00947 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain C7M28_00947 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain C7M28_00947 PF01488 Shikimate / quinate 5-dehydrogenase C7M28_00949 PF01926 50S ribosome-binding GTPase C7M28_00950 PF00004 ATPase family associated with various cellular activities (AAA) C7M28_00950 PF02190 ATP-dependent protease La (LON) substrate-binding domain C7M28_00950 PF05362 Lon protease (S16) C-terminal proteolytic domain C7M28_00951 PF00004 ATPase family associated with various cellular activities (AAA) C7M28_00951 PF05362 Lon protease (S16) C-terminal proteolytic domain C7M28_00952 PF07724 AAA domain (Cdc48 subfamily) C7M28_00952 PF10431 C-terminal, D2-small domain, of ClpB protein C7M28_00952 PF06689 ClpX C4-type zinc finger C7M28_00953 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase C7M28_00953 PF05697 Bacterial trigger factor protein (TF) C7M28_00953 PF05698 Bacterial trigger factor protein (TF) C-terminus C7M28_00955 PF00694 Aconitase C-terminal domain C7M28_00956 PF00330 Aconitase family (aconitate hydratase) C7M28_00957 PF00180 Isocitrate/isopropylmalate dehydrogenase C7M28_00958 PF08502 LeuA allosteric (dimerisation) domain C7M28_00958 PF00682 HMGL-like C7M28_00959 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain C7M28_00959 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain C7M28_00960 PF01842 ACT domain C7M28_00960 PF10369 Small subunit of acetolactate synthase C7M28_00961 PF00205 Thiamine pyrophosphate enzyme, central domain C7M28_00961 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain C7M28_00961 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain C7M28_00963 PF00583 Acetyltransferase (GNAT) family C7M28_00964 PF11181 Heat induced stress protein YflT C7M28_00964 PF09557 Domain of unknown function (DUF2382) C7M28_00966 PF12850 Calcineurin-like phosphoesterase superfamily domain C7M28_00967 PF01725 Ham1 family C7M28_00968 PF03725 3' exoribonuclease family, domain 2 C7M28_00968 PF01138 3' exoribonuclease family, domain 1 C7M28_00969 PF10646 Sporulation and spore germination C7M28_00970 PF01177 Asp/Glu/Hydantoin racemase C7M28_00971 PF01047 MarR family C7M28_00972 PF00196 Bacterial regulatory proteins, luxR family C7M28_00973 PF03061 Thioesterase superfamily C7M28_00974 PF13085 2Fe-2S iron-sulfur cluster binding domain C7M28_00974 PF13183 4Fe-4S dicluster domain C7M28_00975 PF02910 Fumarate reductase flavoprotein C-term C7M28_00975 PF00890 FAD binding domain C7M28_00976 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit C7M28_00977 PF10702 Protein of unknown function (DUF2507) C7M28_00978 PF00696 Amino acid kinase family C7M28_00978 PF01842 ACT domain C7M28_00978 PF13840 ACT domain C7M28_00979 PF08459 UvrC Helix-hairpin-helix N-terminal C7M28_00979 PF02151 UvrB/uvrC motif C7M28_00979 PF01541 GIY-YIG catalytic domain C7M28_00980 PF00085 Thioredoxin C7M28_00981 PF06964 Alpha-L-arabinofuranosidase C-terminal domain C7M28_00983 PF00766 Electron transfer flavoprotein FAD-binding domain C7M28_00983 PF01012 Electron transfer flavoprotein domain C7M28_00984 PF01012 Electron transfer flavoprotein domain C7M28_00985 PF00378 Enoyl-CoA hydratase/isomerase C7M28_00986 PF08359 YsiA-like protein, C-terminal region C7M28_00986 PF00440 Bacterial regulatory proteins, tetR family C7M28_00987 PF13193 AMP-binding enzyme C-terminal domain C7M28_00987 PF00501 AMP-binding enzyme C7M28_00988 PF03994 Domain of Unknown Function (DUF350) C7M28_00989 PF01713 Smr domain C7M28_00989 PF00488 MutS domain V C7M28_00990 PF02811 PHP domain C7M28_00990 PF14716 Helix-hairpin-helix domain C7M28_00990 PF14791 DNA polymerase beta thumb C7M28_00991 PF02674 Colicin V production protein C7M28_00992 PF05164 Cell division protein ZapA C7M28_00993 PF11858 Domain of unknown function (DUF3378) C7M28_00993 PF01351 Ribonuclease HII C7M28_00994 PF03483 B3/4 domain C7M28_00994 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain C7M28_00994 PF03147 Ferredoxin-fold anticodon binding domain C7M28_00994 PF01588 Putative tRNA binding domain C7M28_00994 PF03484 tRNA synthetase B5 domain C7M28_00995 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain C7M28_00995 PF01409 tRNA synthetases class II core domain (F) C7M28_00996 PF08032 RNA 2'-O ribose methyltransferase substrate binding C7M28_00996 PF00588 SpoU rRNA Methylase family C7M28_00997 PF14098 Small, acid-soluble spore protein I C7M28_00998 PF13556 PucR C-terminal helix-turn-helix domain C7M28_00998 PF17853 GGDEF-like domain C7M28_00998 PF05651 Putative sugar diacid recognition C7M28_00999 PF01565 FAD binding domain C7M28_00999 PF02913 FAD linked oxidases, C-terminal domain C7M28_01000 PF02754 Cysteine-rich domain C7M28_01000 PF13183 4Fe-4S dicluster domain C7M28_01001 PF12681 Glyoxalase-like domain C7M28_01002 PF02554 Carbon starvation protein CstA C7M28_01002 PF13722 5TM C-terminal transporter carbon starvation CstA C7M28_01003 PF06964 Alpha-L-arabinofuranosidase C-terminal domain C7M28_01004 PF00528 Binding-protein-dependent transport system inner membrane component C7M28_01005 PF00528 Binding-protein-dependent transport system inner membrane component C7M28_01006 PF01547 Bacterial extracellular solute-binding protein C7M28_01007 PF13685 Iron-containing alcohol dehydrogenase C7M28_01008 PF13344 Haloacid dehalogenase-like hydrolase C7M28_01009 PF00596 Class II Aldolase and Adducin N-terminal domain C7M28_01010 PF00370 FGGY family of carbohydrate kinases, N-terminal domain C7M28_01010 PF02782 FGGY family of carbohydrate kinases, C-terminal domain C7M28_01011 PF02610 L-arabinose isomerase C7M28_01011 PF11762 L-arabinose isomerase C-terminal domain C7M28_01012 PF04616 Glycosyl hydrolases family 43 C7M28_01013 PF05343 M42 glutamyl aminopeptidase C7M28_01015 PF06961 Protein of unknown function (DUF1294) C7M28_01016 PF00453 Ribosomal protein L20 C7M28_01017 PF01632 Ribosomal protein L35 C7M28_01018 PF00707 Translation initiation factor IF-3, C-terminal domain C7M28_01018 PF05198 Translation initiation factor IF-3, N-terminal domain C7M28_01020 PF04172 LrgB-like family C7M28_01021 PF03788 LrgA family C7M28_01022 PF00072 Response regulator receiver domain C7M28_01022 PF04397 LytTr DNA-binding domain C7M28_01023 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C7M28_01023 PF06580 Histidine kinase C7M28_01023 PF07694 5TMR of 5TMR-LYT C7M28_01024 PF13419 Haloacid dehalogenase-like hydrolase C7M28_01025 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) C7M28_01025 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain C7M28_01025 PF02824 TGS domain C7M28_01025 PF03129 Anticodon binding domain C7M28_01026 PF08812 YtxC-like family C7M28_01027 PF09335 SNARE associated Golgi protein C7M28_01028 PF01695 IstB-like ATP binding protein C7M28_01028 PF07319 Primosomal protein DnaI N-terminus C7M28_01029 PF07261 Replication initiation and membrane attachment C7M28_01030 PF03477 ATP cone domain C7M28_01031 PF02675 S-adenosylmethionine decarboxylase C7M28_01032 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain C7M28_01032 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain C7M28_01033 PF01638 HxlR-like helix-turn-helix C7M28_01034 PF07690 Major Facilitator Superfamily C7M28_01035 PF00248 Aldo/keto reductase family C7M28_01036 PF01121 Dephospho-CoA kinase C7M28_01037 PF02659 Putative manganese efflux pump C7M28_01038 PF06827 Zinc finger found in FPG and IleRS C7M28_01038 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain C7M28_01038 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain C7M28_01039 PF01367 5'-3' exonuclease, C-terminal SAM fold C7M28_01039 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain C7M28_01039 PF00476 DNA polymerase family A C7M28_01040 PF00512 His Kinase A (phospho-acceptor) domain C7M28_01040 PF16736 Single Cache-like C7M28_01040 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C7M28_01040 PF00989 PAS fold C7M28_01041 PF00072 Response regulator receiver domain C7M28_01041 PF00486 Transcriptional regulatory protein, C terminal C7M28_01042 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain C7M28_01042 PF00056 lactate/malate dehydrogenase, NAD binding domain C7M28_01043 PF00180 Isocitrate/isopropylmalate dehydrogenase C7M28_01044 PF00285 Citrate synthase, C-terminal domain C7M28_01045 PF04284 Protein of unknown function (DUF441) C7M28_01046 PF01594 AI-2E family transporter C7M28_01047 PF04186 FxsA cytoplasmic membrane protein C7M28_01048 PF02887 Pyruvate kinase, alpha/beta domain C7M28_01048 PF00224 Pyruvate kinase, barrel domain C7M28_01048 PF00391 PEP-utilising enzyme, mobile domain C7M28_01049 PF00365 Phosphofructokinase C7M28_01050 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit C7M28_01051 PF17848 Acetyl-coA carboxylase zinc finger domain C7M28_01051 PF01039 Carboxyl transferase domain C7M28_01052 PF00390 Malic enzyme, N-terminal domain C7M28_01052 PF03949 Malic enzyme, NAD binding domain C7M28_01053 PF02811 PHP domain C7M28_01053 PF14579 Helix-hairpin-helix motif C7M28_01053 PF17657 Bacterial DNA polymerase III alpha subunit finger domain C7M28_01053 PF01336 OB-fold nucleic acid binding domain C7M28_01053 PF07733 Bacterial DNA polymerase III alpha NTPase domain C7M28_01054 PF14034 Sporulation protein YtrH C7M28_01057 PF01368 DHH family C7M28_01057 PF02272 DHHA1 domain C7M28_01058 PF14007 YtpI-like protein C7M28_01059 PF07085 DRTGG domain C7M28_01059 PF00392 Bacterial regulatory proteins, gntR family C7M28_01059 PF03061 Thioesterase superfamily C7M28_01059 PF00571 CBS domain C7M28_01060 PF01925 Sulfite exporter TauE/SafE C7M28_01061 PF01546 Peptidase family M20/M25/M40 C7M28_01061 PF07687 Peptidase dimerisation domain C7M28_01062 PF01687 Riboflavin kinase C7M28_01063 PF00296 Luciferase-like monooxygenase C7M28_01064 PF00462 Glutaredoxin C7M28_01065 PF00296 Luciferase-like monooxygenase C7M28_01066 PF00005 ABC transporter C7M28_01067 PF00528 Binding-protein-dependent transport system inner membrane component C7M28_01068 PF00528 Binding-protein-dependent transport system inner membrane component C7M28_01069 PF00497 Bacterial extracellular solute-binding proteins, family 3 C7M28_01070 PF00497 Bacterial extracellular solute-binding proteins, family 3 C7M28_01071 PF00583 Acetyltransferase (GNAT) family C7M28_01072 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C7M28_01072 PF03466 LysR substrate binding domain C7M28_01076 PF14698 Argininosuccinate lyase C-terminal C7M28_01076 PF00206 Lyase C7M28_01077 PF00764 Arginosuccinate synthase C7M28_01078 PF00994 Probable molybdopterin binding domain C7M28_01079 PF00871 Acetokinase family C7M28_01080 PF02384 N-6 DNA Methylase C7M28_01081 PF08534 Redoxin C7M28_01082 PF09579 Sporulation protein YtfJ (Spore_YtfJ) C7M28_01083 PF11167 Protein of unknown function (DUF2953) C7M28_01084 PF06271 RDD family C7M28_01085 PF01343 Peptidase family S49 C7M28_01086 PF01513 ATP-NAD kinase C7M28_01087 PF07969 Amidohydrolase family C7M28_01088 PF00501 AMP-binding enzyme C7M28_01088 PF13193 AMP-binding enzyme C-terminal domain C7M28_01089 PF00269 Small, acid-soluble spore proteins, alpha/beta type C7M28_01090 PF02926 THUMP domain C7M28_01090 PF02568 Thiamine biosynthesis protein (ThiI) C7M28_01091 PF00266 Aminotransferase class-V C7M28_01092 PF05525 Branched-chain amino acid transport protein C7M28_01093 PF06160 Septation ring formation regulator, EzrA C7M28_01094 PF02811 PHP domain C7M28_01095 PF00440 Bacterial regulatory proteins, tetR family C7M28_01096 PF13185 GAF domain C7M28_01097 PF00990 Diguanylate cyclase, GGDEF domain C7M28_01098 PF00163 Ribosomal protein S4/S9 N-terminal domain C7M28_01098 PF01479 S4 domain C7M28_01100 PF00579 tRNA synthetases class I (W and Y) C7M28_01100 PF01479 S4 domain C7M28_01101 PF13193 AMP-binding enzyme C-terminal domain C7M28_01101 PF00501 AMP-binding enzyme C7M28_01102 PF00583 Acetyltransferase (GNAT) family C7M28_01103 PF00571 CBS domain C7M28_01104 PF00850 Histone deacetylase domain C7M28_01105 PF13677 Membrane MotB of proton-channel complex MotA/MotB C7M28_01105 PF00691 OmpA family C7M28_01106 PF01618 MotA/TolQ/ExbB proton channel family C7M28_01107 PF00356 Bacterial regulatory proteins, lacI family C7M28_01108 PF00793 DAHP synthetase I family C7M28_01108 PF01817 Chorismate mutase type II C7M28_01109 PF11009 Protein of unknown function (DUF2847) C7M28_01110 PF12732 YtxH-like protein C7M28_01111 PF06103 Bacterial protein of unknown function (DUF948) C7M28_01112 PF01225 Mur ligase family, catalytic domain C7M28_01112 PF02875 Mur ligase family, glutamate ligase domain C7M28_01112 PF08245 Mur ligase middle domain C7M28_01113 PF09397 Ftsk gamma domain C7M28_01113 PF17854 FtsK alpha domain C7M28_01113 PF01580 FtsK/SpoIIIE family C7M28_01114 PF14794 Domain of unknown function (DUF4479) C7M28_01114 PF01588 Putative tRNA binding domain C7M28_01115 PF07285 Protein of unknown function (DUF1444) C7M28_01116 PF00085 Thioredoxin C7M28_01117 PF11071 Nucleoside 2-deoxyribosyltransferase YtoQ C7M28_01118 PF05343 M42 glutamyl aminopeptidase C7M28_01119 PF03413 Peptidase propeptide and YPEB domain C7M28_01120 PF00390 Malic enzyme, N-terminal domain C7M28_01120 PF03949 Malic enzyme, NAD binding domain C7M28_01121 PF00753 Metallo-beta-lactamase superfamily C7M28_01122 PF02390 Putative methyltransferase C7M28_01123 PF14165 YtzH-like protein C7M28_01124 PF01636 Phosphotransferase enzyme family C7M28_01125 PF00128 Alpha amylase, catalytic domain C7M28_01125 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) C7M28_01125 PF17999 Pullulanase N1-terminal domain C7M28_01126 PF00781 Diacylglycerol kinase catalytic domain C7M28_01129 PF00291 Pyridoxal-phosphate dependent enzyme C7M28_01130 PF01546 Peptidase family M20/M25/M40 C7M28_01131 PF00860 Permease family C7M28_01132 PF05975 Bacterial ABC transporter protein EcsB C7M28_01133 PF00005 ABC transporter C7M28_01134 PF08220 DeoR-like helix-turn-helix domain C7M28_01135 PF01479 S4 domain C7M28_01135 PF00849 RNA pseudouridylate synthase C7M28_01136 PF01943 Polysaccharide biosynthesis protein C7M28_01136 PF14667 Polysaccharide biosynthesis C-terminal domain C7M28_01138 PF02028 BCCT, betaine/carnitine/choline family transporter C7M28_01139 PF10957 Sporulation protein Cse60 C7M28_01140 PF04854 Protein of unknown function, DUF624 C7M28_01141 PF02894 Oxidoreductase family, C-terminal alpha/beta domain C7M28_01141 PF01408 Oxidoreductase family, NAD-binding Rossmann fold C7M28_01143 PF07470 Glycosyl Hydrolase Family 88 C7M28_01144 PF00528 Binding-protein-dependent transport system inner membrane component C7M28_01145 PF12833 Helix-turn-helix domain C7M28_01145 PF17853 GGDEF-like domain C7M28_01146 PF13416 Bacterial extracellular solute-binding protein C7M28_01147 PF00528 Binding-protein-dependent transport system inner membrane component C7M28_01148 PF01370 NAD dependent epimerase/dehydratase family C7M28_01149 PF00067 Cytochrome P450 C7M28_01150 PF06968 Biotin and Thiamin Synthesis associated domain C7M28_01150 PF04055 Radical SAM superfamily C7M28_01152 PF00155 Aminotransferase class I and II C7M28_01153 PF00202 Aminotransferase class-III C7M28_01154 PF03744 6-carboxyhexanoate--CoA ligase C7M28_01155 PF01738 Dienelactone hydrolase family C7M28_01156 PF00356 Bacterial regulatory proteins, lacI family C7M28_01157 PF01547 Bacterial extracellular solute-binding protein C7M28_01158 PF00528 Binding-protein-dependent transport system inner membrane component C7M28_01159 PF00528 Binding-protein-dependent transport system inner membrane component C7M28_01160 PF02056 Family 4 glycosyl hydrolase C7M28_01160 PF11975 Family 4 glycosyl hydrolase C-terminal domain C7M28_01161 PF00581 Rhodanese-like domain C7M28_01162 PF08264 Anticodon-binding domain of tRNA C7M28_01162 PF00133 tRNA synthetases class I (I, L, M and V) C7M28_01162 PF13603 Leucyl-tRNA synthetase, Domain 2 C7M28_01162 PF09334 tRNA synthetases class I (M) C7M28_01163 PF14074 Protein of unknown function (DUF4257) C7M28_01164 PF13426 PAS domain C7M28_01164 PF01740 STAS domain C7M28_01165 PF07690 Major Facilitator Superfamily C7M28_01166 PF04791 LMBR1-like membrane protein C7M28_01167 PF02687 FtsX-like permease family C7M28_01168 PF00005 ABC transporter C7M28_01169 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C7M28_01170 PF00072 Response regulator receiver domain C7M28_01170 PF00486 Transcriptional regulatory protein, C terminal C7M28_01171 PF02687 FtsX-like permease family C7M28_01171 PF12704 MacB-like periplasmic core domain C7M28_01172 PF00005 ABC transporter C7M28_01175 PF00005 ABC transporter C7M28_01176 PF00392 Bacterial regulatory proteins, gntR family C7M28_01178 PF10732 Protein of unknown function (DUF2524) C7M28_01179 PF16199 Radical_SAM C-terminal domain C7M28_01179 PF04055 Radical SAM superfamily C7M28_01180 PF06962 Putative rRNA methylase C7M28_01181 PF10776 Protein of unknown function (DUF2600) C7M28_01182 PF12146 Serine aminopeptidase, S33 C7M28_01183 PF00132 Bacterial transferase hexapeptide (six repeats) C7M28_01184 PF00324 Amino acid permease C7M28_01185 PF00733 Asparagine synthase C7M28_01185 PF13537 Glutamine amidotransferase domain C7M28_01186 PF02773 S-adenosylmethionine synthetase, C-terminal domain C7M28_01186 PF02772 S-adenosylmethionine synthetase, central domain C7M28_01186 PF00438 S-adenosylmethionine synthetase, N-terminal domain C7M28_01187 PF01293 Phosphoenolpyruvate carboxykinase C7M28_01188 PF10763 Protein of unknown function (DUF2584) C7M28_01189 PF00326 Prolyl oligopeptidase family C7M28_01191 PF00005 ABC transporter C7M28_01192 PF00528 Binding-protein-dependent transport system inner membrane component C7M28_01193 PF00293 NUDIX domain C7M28_01194 PF05105 Bacteriophage holin family C7M28_01195 PF00210 Ferritin-like domain C7M28_01197 PF13115 YtkA-like C7M28_01198 PF02664 S-Ribosylhomocysteinase (LuxS) C7M28_01199 PF00484 Carbonic anhydrase C7M28_01200 PF01197 Ribosomal protein L31 C7M28_01201 PF01654 Cytochrome bd terminal oxidase subunit I C7M28_01202 PF02322 Cytochrome bd terminal oxidase subunit II C7M28_01203 PF07561 Domain of Unknown Function (DUF1540) C7M28_01204 PF00950 ABC 3 transport family C7M28_01205 PF00950 ABC 3 transport family C7M28_01206 PF00005 ABC transporter C7M28_01207 PF01297 Zinc-uptake complex component A periplasmic C7M28_01208 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain C7M28_01208 PF13378 Enolase C-terminal domain-like C7M28_01209 PF13193 AMP-binding enzyme C-terminal domain C7M28_01209 PF00501 AMP-binding enzyme C7M28_01210 PF00378 Enoyl-CoA hydratase/isomerase C7M28_01211 PF00561 alpha/beta hydrolase fold C7M28_01212 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain C7M28_01212 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain C7M28_01212 PF16582 Middle domain of thiamine pyrophosphate C7M28_01213 PF00425 chorismate binding enzyme C7M28_01214 PF01258 Prokaryotic dksA/traR C4-type zinc finger C7M28_01215 PF00483 Nucleotidyl transferase C7M28_01216 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain C7M28_01216 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain C7M28_01216 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain C7M28_01217 PF01370 NAD dependent epimerase/dehydratase family C7M28_01218 PF00534 Glycosyl transferases group 1 C7M28_01218 PF13439 Glycosyltransferase Family 4 C7M28_01221 PF00534 Glycosyl transferases group 1 C7M28_01221 PF13439 Glycosyltransferase Family 4 C7M28_01222 PF01636 Phosphotransferase enzyme family C7M28_01223 PF03073 TspO/MBR family C7M28_01224 PF00343 Carbohydrate phosphorylase C7M28_01225 PF08323 Starch synthase catalytic domain C7M28_01225 PF00534 Glycosyl transferases group 1 C7M28_01226 PF00483 Nucleotidyl transferase C7M28_01227 PF00483 Nucleotidyl transferase C7M28_01228 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) C7M28_01228 PF00128 Alpha amylase, catalytic domain C7M28_01228 PF02806 Alpha amylase, C-terminal all-beta domain C7M28_01253 PF09515 Thiamine transporter protein (Thia_YuaJ) C7M28_01254 PF00583 Acetyltransferase (GNAT) family C7M28_01255 PF15975 Flotillin C7M28_01255 PF01145 SPFH domain / Band 7 family C7M28_01257 PF12867 DinB superfamily C7M28_01259 PF00465 Iron-containing alcohol dehydrogenase C7M28_01260 PF00171 Aldehyde dehydrogenase family C7M28_01262 PF17735 Biofilm surface layer A C7M28_01263 PF02080 TrkA-C domain C7M28_01263 PF02254 TrkA-N domain C7M28_01264 PF02386 Cation transport protein C7M28_01265 PF05360 yiaA/B two helix domain C7M28_01266 PF13457 GW (Gly-Tryp) dipeptide domain C7M28_01266 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase C7M28_01267 PF07690 Major Facilitator Superfamily C7M28_01268 PF05995 Cysteine dioxygenase type I C7M28_01270 PF02673 Bacitracin resistance protein BacA C7M28_01271 PF01594 AI-2E family transporter C7M28_01272 PF02894 Oxidoreductase family, C-terminal alpha/beta domain C7M28_01272 PF01408 Oxidoreductase family, NAD-binding Rossmann fold C7M28_01273 PF06134 L-rhamnose isomerase (RhaA) C7M28_01274 PF05336 L-rhamnose mutarotase C7M28_01275 PF02782 FGGY family of carbohydrate kinases, C-terminal domain C7M28_01275 PF00370 FGGY family of carbohydrate kinases, N-terminal domain C7M28_01276 PF08220 DeoR-like helix-turn-helix domain C7M28_01276 PF00455 DeoR C terminal sensor domain C7M28_01277 PF00596 Class II Aldolase and Adducin N-terminal domain C7M28_01279 PF02743 Cache domain C7M28_01279 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C7M28_01279 PF00672 HAMP domain C7M28_01280 PF00672 HAMP domain C7M28_01280 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C7M28_01280 PF02743 Cache domain C7M28_01281 PF00672 HAMP domain C7M28_01281 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C7M28_01281 PF02743 Cache domain C7M28_01282 PF00672 HAMP domain C7M28_01282 PF02743 Cache domain C7M28_01282 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C7M28_01285 PF01894 Uncharacterised protein family UPF0047 C7M28_01286 PF00128 Alpha amylase, catalytic domain C7M28_01286 PF16657 Maltogenic Amylase, C-terminal domain C7M28_01287 PF03471 Transporter associated domain C7M28_01287 PF01595 Cyclin M transmembrane N-terminal domain C7M28_01287 PF00571 CBS domain C7M28_01288 PF04298 Putative neutral zinc metallopeptidase C7M28_01290 PF11458 Membrane-integrating protein Mistic C7M28_01291 PF02254 TrkA-N domain C7M28_01291 PF07885 Ion channel C7M28_01292 PF08868 YugN-like family C7M28_01294 PF00342 Phosphoglucose isomerase C7M28_01295 PF00465 Iron-containing alcohol dehydrogenase C7M28_01296 PF00465 Iron-containing alcohol dehydrogenase C7M28_01297 PF04070 Domain of unknown function (DUF378) C7M28_01298 PF00575 S1 RNA binding domain C7M28_01299 PF00155 Aminotransferase class I and II C7M28_01300 PF01037 Lrp/AsnC ligand binding domain C7M28_01301 PF00561 alpha/beta hydrolase fold C7M28_01301 PF08386 TAP-like protein C7M28_01302 PF08958 Domain of unknown function (DUF1871) C7M28_01303 PF00155 Aminotransferase class I and II C7M28_01304 PF00512 His Kinase A (phospho-acceptor) domain C7M28_01304 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C7M28_01305 PF08810 Kinase associated protein B C7M28_01306 PF00929 Exonuclease C7M28_01308 PF07690 Major Facilitator Superfamily C7M28_01309 PF00912 Transglycosylase C7M28_01309 PF00905 Penicillin binding protein transpeptidase domain C7M28_01310 PF04134 Protein of unknown function, DUF393 C7M28_01311 PF17328 Family of unknown function (DUF5366) C7M28_01312 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C7M28_01312 PF00989 PAS fold C7M28_01312 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain C7M28_01312 PF17203 Single cache domain 3 C7M28_01313 PF00072 Response regulator receiver domain C7M28_01318 PF03390 2-hydroxycarboxylate transporter family C7M28_01320 PF00361 Proton-conducting membrane transporter C7M28_01320 PF13244 Domain of unknown function (DUF4040) C7M28_01320 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus C7M28_01321 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter C7M28_01322 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L C7M28_01323 PF00361 Proton-conducting membrane transporter C7M28_01324 PF01899 Na+/H+ ion antiporter subunit C7M28_01325 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) C7M28_01326 PF03334 Na+/H+ antiporter subunit C7M28_01327 PF03061 Thioesterase superfamily C7M28_01328 PF00196 Bacterial regulatory proteins, luxR family C7M28_01328 PF00072 Response regulator receiver domain C7M28_01329 PF07730 Histidine kinase C7M28_01329 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C7M28_01331 PF00348 Polyprenyl synthetase C7M28_01332 PF08181 DegQ (SacQ) family C7M28_01335 PF08668 HDOD domain C7M28_01335 PF00563 EAL domain C7M28_01336 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family C7M28_01336 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain C7M28_01336 PF17956 Nicotinate phosphoribosyltransferase C-terminal domain C7M28_01337 PF00857 Isochorismatase family C7M28_01338 PF07997 Protein of unknown function (DUF1694) C7M28_01339 PF14166 YueH-like protein C7M28_01340 PF10676 Spore germination protein gerPA/gerPF C7M28_01341 PF01594 AI-2E family transporter C7M28_01342 PF10049 Protein of unknown function (DUF2283) C7M28_01343 PF10842 Protein of unknown function (DUF2642) C7M28_01344 PF01966 HD domain C7M28_01345 PF00106 short chain dehydrogenase C7M28_01346 PF17355 Family of unknown function (DUF5383) C7M28_01348 PF12538 DNA transporter C7M28_01348 PF01580 FtsK/SpoIIIE family C7M28_01349 PF10140 WXG100 protein secretion system (Wss), protein YukC C7M28_01350 PF08817 WXG100 protein secretion system (Wss), protein YukD C7M28_01351 PF06013 Proteins of 100 residues with WXG C7M28_01352 PF17853 GGDEF-like domain C7M28_01352 PF13556 PucR C-terminal helix-turn-helix domain C7M28_01352 PF06018 CodY GAF-like domain C7M28_01353 PF01262 Alanine dehydrogenase/PNT, C-terminal domain C7M28_01353 PF05222 Alanine dehydrogenase/PNT, N-terminal domain C7M28_01354 PF10042 Uncharacterized conserved protein (DUF2278) C7M28_01355 PF03621 MbtH-like protein C7M28_01356 PF00501 AMP-binding enzyme C7M28_01356 PF00550 Phosphopantetheine attachment site C7M28_01356 PF00975 Thioesterase domain C7M28_01356 PF13193 AMP-binding enzyme C-terminal domain C7M28_01356 PF00668 Condensation domain C7M28_01357 PF00857 Isochorismatase family C7M28_01357 PF00550 Phosphopantetheine attachment site C7M28_01358 PF00501 AMP-binding enzyme C7M28_01358 PF13193 AMP-binding enzyme C-terminal domain C7M28_01359 PF00425 chorismate binding enzyme C7M28_01360 PF00106 short chain dehydrogenase C7M28_01361 PF00756 Putative esterase C7M28_01362 PF00174 Oxidoreductase molybdopterin binding domain C7M28_01363 PF02632 BioY family C7M28_01364 PF13726 Na+-H+ antiporter family C7M28_01364 PF03553 Na+/H+ antiporter family C7M28_01365 PF02789 Cytosol aminopeptidase family, N-terminal domain C7M28_01365 PF00883 Cytosol aminopeptidase family, catalytic domain C7M28_01366 PF02681 Divergent PAP2 family C7M28_01367 PF06725 3D domain C7M28_01368 PF14068 Putative membrane protein C7M28_01369 PF07992 Pyridine nucleotide-disulphide oxidoreductase C7M28_01370 PF07992 Pyridine nucleotide-disulphide oxidoreductase C7M28_01372 PF00478 IMP dehydrogenase / GMP reductase domain C7M28_01373 PF04299 Putative FMN-binding domain C7M28_01374 PF00583 Acetyltransferase (GNAT) family C7M28_01375 PF01521 Iron-sulphur cluster biosynthesis C7M28_01376 PF01678 Diaminopimelate epimerase C7M28_01377 PF01773 Na+ dependent nucleoside transporter N-terminus C7M28_01377 PF07662 Na+ dependent nucleoside transporter C-terminus C7M28_01378 PF07293 Protein of unknown function (DUF1450) C7M28_01379 PF07992 Pyridine nucleotide-disulphide oxidoreductase C7M28_01380 PF07315 Protein of unknown function (DUF1462) C7M28_01381 PF01106 NifU-like domain C7M28_01382 PF00326 Prolyl oligopeptidase family C7M28_01382 PF07676 WD40-like Beta Propeller Repeat C7M28_01383 PF00288 GHMP kinases N terminal domain C7M28_01383 PF08544 GHMP kinases C terminal C7M28_01384 PF00291 Pyridoxal-phosphate dependent enzyme C7M28_01385 PF01842 ACT domain C7M28_01385 PF03447 Homoserine dehydrogenase, NAD binding domain C7M28_01385 PF00742 Homoserine dehydrogenase C7M28_01387 PF04608 Phosphatidylglycerophosphatase A C7M28_01388 PF13344 Haloacid dehalogenase-like hydrolase C7M28_01389 PF01934 Protein of unknown function DUF86 C7M28_01390 PF06265 Protein of unknown function (DUF1027) C7M28_01391 PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) C7M28_01392 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family C7M28_01392 PF04055 Radical SAM superfamily C7M28_01393 PF01551 Peptidase family M23 C7M28_01394 PF09560 Sporulation protein YunB (Spo_YunB) C7M28_01395 PF08827 Domain of unknown function (DUF1805) C7M28_01396 PF02872 5'-nucleotidase, C-terminal domain C7M28_01397 PF01925 Sulfite exporter TauE/SafE C7M28_01398 PF01904 Protein of unknown function DUF72 C7M28_01400 PF01979 Amidohydrolase family C7M28_01401 PF17853 GGDEF-like domain C7M28_01401 PF13556 PucR C-terminal helix-turn-helix domain C7M28_01401 PF07905 Purine catabolism regulatory protein-like family C7M28_01402 PF00860 Permease family C7M28_01403 PF00860 Permease family C7M28_01404 PF01014 Uricase C7M28_01404 PF09349 OHCU decarboxylase C7M28_01405 PF00576 HIUase/Transthyretin family C7M28_01406 PF00111 2Fe-2S iron-sulfur cluster binding domain C7M28_01406 PF01799 [2Fe-2S] binding domain C7M28_01407 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase C7M28_01407 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain C7M28_01408 PF00941 FAD binding domain in molybdopterin dehydrogenase C7M28_01409 PF12804 MobA-like NTP transferase domain C7M28_01410 PF13478 XdhC Rossmann domain C7M28_01410 PF02625 XdhC and CoxI family C7M28_01412 PF00266 Aminotransferase class-V C7M28_01413 PF01546 Peptidase family M20/M25/M40 C7M28_01414 PF04231 Endonuclease I C7M28_01415 PF17912 MalK OB fold domain C7M28_01415 PF00005 ABC transporter C7M28_01415 PF03459 TOBE domain C7M28_01416 PF00392 Bacterial regulatory proteins, gntR family C7M28_01416 PF07702 UTRA domain C7M28_01417 PF00294 pfkB family carbohydrate kinase C7M28_01418 PF00528 Binding-protein-dependent transport system inner membrane component C7M28_01419 PF00528 Binding-protein-dependent transport system inner membrane component C7M28_01420 PF01547 Bacterial extracellular solute-binding protein C7M28_01421 PF01380 SIS domain C7M28_01422 PF01541 GIY-YIG catalytic domain C7M28_01423 PF01266 FAD dependent oxidoreductase C7M28_01426 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily C7M28_01427 PF01458 Uncharacterized protein family (UPF0051) C7M28_01428 PF01592 NifU-like N terminal domain C7M28_01429 PF00266 Aminotransferase class-V C7M28_01430 PF01458 Uncharacterized protein family (UPF0051) C7M28_01431 PF00005 ABC transporter C7M28_01432 PF02627 Carboxymuconolactone decarboxylase family C7M28_01433 PF03180 NLPA lipoprotein C7M28_01434 PF00528 Binding-protein-dependent transport system inner membrane component C7M28_01435 PF09383 NIL domain C7M28_01435 PF00005 ABC transporter C7M28_01436 PF02036 SCP-2 sterol transfer family C7M28_01437 PF00085 Thioredoxin C7M28_01438 PF01751 Toprim domain C7M28_01439 PF10830 Protein of unknown function (DUF2553) C7M28_01440 PF01597 Glycine cleavage H-protein C7M28_01441 PF03960 ArsC family C7M28_01442 PF02771 Acyl-CoA dehydrogenase, N-terminal domain C7M28_01442 PF02770 Acyl-CoA dehydrogenase, middle domain C7M28_01442 PF00441 Acyl-CoA dehydrogenase, C-terminal domain C7M28_01443 PF02803 Thiolase, C-terminal domain C7M28_01443 PF00108 Thiolase, N-terminal domain C7M28_01444 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain C7M28_01444 PF00378 Enoyl-CoA hydratase/isomerase C7M28_01444 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain C7M28_01445 PF14115 YuzL-like protein C7M28_01446 PF01619 Proline dehydrogenase C7M28_01448 PF07875 Coat F domain C7M28_01449 PF01047 MarR family C7M28_01450 PF07690 Major Facilitator Superfamily C7M28_01451 PF14552 Tautomerase enzyme C7M28_01453 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C7M28_01453 PF03466 LysR substrate binding domain C7M28_01454 PF10835 Protein of unknown function (DUF2573) C7M28_01455 PF00005 ABC transporter C7M28_01456 PF14039 YusW-like protein C7M28_01458 PF00106 short chain dehydrogenase C7M28_01459 PF00210 Ferritin-like domain C7M28_01460 PF13180 PDZ domain C7M28_01461 PF00072 Response regulator receiver domain C7M28_01461 PF00486 Transcriptional regulatory protein, C terminal C7M28_01462 PF00512 His Kinase A (phospho-acceptor) domain C7M28_01462 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C7M28_01462 PF00672 HAMP domain C7M28_01463 PF00440 Bacterial regulatory proteins, tetR family C7M28_01464 PF10415 Fumarase C C-terminus C7M28_01464 PF00206 Lyase C7M28_01465 PF13113 Protein of unknown function (DUF3970) C7M28_01466 PF03323 Bacillus/Clostridium GerA spore germination protein C7M28_01467 PF03845 Spore germination protein C7M28_01468 PF05504 Spore germination B3/ GerAC like, C-terminal C7M28_01469 PF00072 Response regulator receiver domain C7M28_01469 PF00196 Bacterial regulatory proteins, luxR family C7M28_01470 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C7M28_01470 PF00672 HAMP domain C7M28_01470 PF07730 Histidine kinase C7M28_01471 PF09922 Cell wall-active antibiotics response 4TMS YvqF C7M28_01472 PF13349 Putative adhesin C7M28_01473 PF04012 PspA/IM30 family C7M28_01475 PF07690 Major Facilitator Superfamily C7M28_01476 PF01923 Cobalamin adenosyltransferase C7M28_01477 PF00005 ABC transporter C7M28_01478 PF01032 FecCD transport family C7M28_01479 PF01497 Periplasmic binding protein C7M28_01480 PF00106 short chain dehydrogenase C7M28_01481 PF08450 SMP-30/Gluconolactonase/LRE-like region C7M28_01482 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C7M28_01482 PF00512 His Kinase A (phospho-acceptor) domain C7M28_01483 PF00486 Transcriptional regulatory protein, C terminal C7M28_01483 PF00072 Response regulator receiver domain C7M28_01485 PF04545 Sigma-70, region 4 C7M28_01486 PF12841 YvrJ protein family C7M28_01487 PF00190 Cupin C7M28_01488 PF14184 Regulatory protein YrvL C7M28_01489 PF12704 MacB-like periplasmic core domain C7M28_01489 PF02687 FtsX-like permease family C7M28_01490 PF00005 ABC transporter C7M28_01491 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion C7M28_01492 PF00005 ABC transporter C7M28_01493 PF01032 FecCD transport family C7M28_01494 PF01032 FecCD transport family C7M28_01495 PF01497 Periplasmic binding protein C7M28_01497 PF13520 Amino acid permease C7M28_01498 PF09575 Small spore protein J (Spore_SspJ) C7M28_01499 PF04307 LexA-binding, inner membrane-associated putative hydrolase C7M28_01500 PF00884 Sulfatase C7M28_01501 PF12728 Helix-turn-helix domain C7M28_01501 PF12727 PBP superfamily domain C7M28_01503 PF00528 Binding-protein-dependent transport system inner membrane component C7M28_01504 PF00248 Aldo/keto reductase family C7M28_01506 PF00999 Sodium/hydrogen exchanger family C7M28_01507 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain C7M28_01507 PF01077 Nitrite and sulphite reductase 4Fe-4S domain C7M28_01508 PF00175 Oxidoreductase NAD-binding domain C7M28_01508 PF00258 Flavodoxin C7M28_01508 PF00667 FAD binding domain C7M28_01509 PF13538 UvrD-like helicase C-terminal domain C7M28_01511 PF03458 UPF0126 domain C7M28_01512 PF02600 Disulfide bond formation protein DsbB C7M28_01513 PF13462 Thioredoxin C7M28_01514 PF00403 Heavy-metal-associated domain C7M28_01515 PF00403 Heavy-metal-associated domain C7M28_01516 PF00403 Heavy-metal-associated domain C7M28_01517 PF02583 Metal-sensitive transcriptional repressor C7M28_01518 PF01408 Oxidoreductase family, NAD-binding Rossmann fold C7M28_01518 PF02894 Oxidoreductase family, C-terminal alpha/beta domain C7M28_01519 PF02525 Flavodoxin-like fold C7M28_01521 PF17314 Family of unknown function (DUF5360) C7M28_01522 PF00893 Small Multidrug Resistance protein C7M28_01523 PF00440 Bacterial regulatory proteins, tetR family C7M28_01524 PF00106 short chain dehydrogenase C7M28_01526 PF01668 SmpB protein C7M28_01527 PF00575 S1 RNA binding domain C7M28_01527 PF00773 RNB domain C7M28_01527 PF08206 Ribonuclease B OB domain C7M28_01527 PF17876 Cold shock domain C7M28_01528 PF12146 Serine aminopeptidase, S33 C7M28_01529 PF03840 Preprotein translocase SecG subunit C7M28_01530 PF00561 alpha/beta hydrolase fold C7M28_01531 PF01381 Helix-turn-helix C7M28_01534 PF01638 HxlR-like helix-turn-helix C7M28_01535 PF12729 Four helix bundle sensory module for signal transduction C7M28_01535 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C7M28_01535 PF00672 HAMP domain C7M28_01536 PF00528 Binding-protein-dependent transport system inner membrane component C7M28_01537 PF04069 Substrate binding domain of ABC-type glycine betaine transport system C7M28_01538 PF00528 Binding-protein-dependent transport system inner membrane component C7M28_01539 PF00005 ABC transporter C7M28_01539 PF00571 CBS domain C7M28_01540 PF12802 MarR family C7M28_01541 PF00528 Binding-protein-dependent transport system inner membrane component C7M28_01542 PF04069 Substrate binding domain of ABC-type glycine betaine transport system C7M28_01543 PF00528 Binding-protein-dependent transport system inner membrane component C7M28_01544 PF00005 ABC transporter C7M28_01544 PF00571 CBS domain C7M28_01545 PF12802 MarR family C7M28_01546 PF01914 MarC family integral membrane protein C7M28_01547 PF08000 Bacterial PH domain C7M28_01547 PF11724 YvbH-like oligomerisation region C7M28_01549 PF13240 zinc-ribbon domain C7M28_01550 PF00583 Acetyltransferase (GNAT) family C7M28_01551 PF03952 Enolase, N-terminal domain C7M28_01551 PF00113 Enolase, C-terminal TIM barrel domain C7M28_01552 PF06415 BPG-independent PGAM N-terminus (iPGM_N) C7M28_01552 PF01676 Metalloenzyme superfamily C7M28_01553 PF00121 Triosephosphate isomerase C7M28_01554 PF00162 Phosphoglycerate kinase C7M28_01555 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain C7M28_01555 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain C7M28_01556 PF04198 Putative sugar-binding domain C7M28_01557 PF00083 Sugar (and other) transporter C7M28_01558 PF00392 Bacterial regulatory proteins, gntR family C7M28_01559 PF00296 Luciferase-like monooxygenase C7M28_01560 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C7M28_01560 PF03466 LysR substrate binding domain C7M28_01561 PF00892 EamA-like transporter family C7M28_01562 PF00324 Amino acid permease C7M28_01563 PF00704 Glycosyl hydrolases family 18 C7M28_01564 PF02589 LUD domain C7M28_01565 PF02589 LUD domain C7M28_01565 PF13183 4Fe-4S dicluster domain C7M28_01565 PF11870 Domain of unknown function (DUF3390) C7M28_01566 PF02754 Cysteine-rich domain C7M28_01567 PF00196 Bacterial regulatory proteins, luxR family C7M28_01567 PF00072 Response regulator receiver domain C7M28_01568 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C7M28_01568 PF07730 Histidine kinase C7M28_01570 PF00005 ABC transporter C7M28_01571 PF12697 Alpha/beta hydrolase family C7M28_01572 PF07228 Stage II sporulation protein E (SpoIIE) C7M28_01572 PF13426 PAS domain C7M28_01573 PF07745 Glycosyl hydrolase family 53 C7M28_01574 PF08532 Beta-galactosidase trimerisation domain C7M28_01574 PF08533 Beta-galactosidase C-terminal domain C7M28_01574 PF02449 Beta-galactosidase C7M28_01575 PF00528 Binding-protein-dependent transport system inner membrane component C7M28_01576 PF00528 Binding-protein-dependent transport system inner membrane component C7M28_01577 PF13416 Bacterial extracellular solute-binding protein C7M28_01578 PF00356 Bacterial regulatory proteins, lacI family C7M28_01579 PF07729 FCD domain C7M28_01579 PF00392 Bacterial regulatory proteins, gntR family C7M28_01580 PF02652 L-lactate permease C7M28_01581 PF00309 Sigma-54 factor, Activator interacting domain (AID) C7M28_01581 PF04963 Sigma-54 factor, core binding domain C7M28_01581 PF04552 Sigma-54, DNA binding domain C7M28_01582 PF09628 YvfG protein C7M28_01583 PF04230 Polysaccharide pyruvyl transferase C7M28_01584 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family C7M28_01585 PF17836 PglD N-terminal domain C7M28_01585 PF00132 Bacterial transferase hexapeptide (six repeats) C7M28_01586 PF02397 Bacterial sugar transferase C7M28_01587 PF01943 Polysaccharide biosynthesis protein C7M28_01587 PF14667 Polysaccharide biosynthesis C-terminal domain C7M28_01588 PF00535 Glycosyl transferase family 2 C7M28_01589 PF04230 Polysaccharide pyruvyl transferase C7M28_01590 PF00535 Glycosyl transferase family 2 C7M28_01592 PF13439 Glycosyltransferase Family 4 C7M28_01592 PF00534 Glycosyl transferases group 1 C7M28_01593 PF00535 Glycosyl transferase family 2 C7M28_01594 PF00534 Glycosyl transferases group 1 C7M28_01594 PF13439 Glycosyltransferase Family 4 C7M28_01595 PF02719 Polysaccharide biosynthesis protein C7M28_01596 PF13614 AAA domain C7M28_01597 PF02706 Chain length determinant protein C7M28_01598 PF08671 Anti-repressor SinI C7M28_01598 PF01381 Helix-turn-helix C7M28_01599 PF00135 Carboxylesterase family C7M28_01601 PF05870 Phenolic acid decarboxylase (PAD) C7M28_01603 PF01177 Asp/Glu/Hydantoin racemase C7M28_01604 PF00144 Beta-lactamase C7M28_01604 PF11954 Domain of unknown function (DUF3471) C7M28_01605 PF02435 Levansucrase/Invertase C7M28_01606 PF00251 Glycosyl hydrolases family 32 N-terminal domain C7M28_01606 PF08244 Glycosyl hydrolases family 32 C terminal C7M28_01607 PF13520 Amino acid permease C7M28_01608 PF17934 Tetracyclin repressor-like, C-terminal domain C7M28_01608 PF00440 Bacterial regulatory proteins, tetR family C7M28_01609 PF00893 Small Multidrug Resistance protein C7M28_01610 PF00893 Small Multidrug Resistance protein C7M28_01611 PF11553 Protein of unknown function (DUF3231) C7M28_01612 PF08031 Berberine and berberine like C7M28_01612 PF01565 FAD binding domain C7M28_01613 PF01734 Patatin-like phospholipase C7M28_01615 PF00574 Clp protease C7M28_01616 PF13419 Haloacid dehalogenase-like hydrolase C7M28_01617 PF00128 Alpha amylase, catalytic domain C7M28_01617 PF16657 Maltogenic Amylase, C-terminal domain C7M28_01618 PF03632 Glycosyl hydrolase family 65 central catalytic domain C7M28_01618 PF03636 Glycosyl hydrolase family 65, N-terminal domain C7M28_01618 PF03633 Glycosyl hydrolase family 65, C-terminal domain C7M28_01619 PF06691 Protein of unknown function (DUF1189) C7M28_01620 PF00528 Binding-protein-dependent transport system inner membrane component C7M28_01621 PF00528 Binding-protein-dependent transport system inner membrane component C7M28_01622 PF13416 Bacterial extracellular solute-binding protein C7M28_01623 PF02903 Alpha amylase, N-terminal ig-like domain C7M28_01623 PF00128 Alpha amylase, catalytic domain C7M28_01624 PF00356 Bacterial regulatory proteins, lacI family C7M28_01625 PF03641 Possible lysine decarboxylase C7M28_01626 PF03819 MazG nucleotide pyrophosphohydrolase domain C7M28_01627 PF00916 Sulfate permease family C7M28_01627 PF01740 STAS domain C7M28_01628 PF00484 Carbonic anhydrase C7M28_01629 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain C7M28_01629 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain C7M28_01630 PF02687 FtsX-like permease family C7M28_01631 PF00005 ABC transporter C7M28_01632 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C7M28_01633 PF00072 Response regulator receiver domain C7M28_01633 PF00486 Transcriptional regulatory protein, C terminal C7M28_01635 PF00797 N-acetyltransferase C7M28_01636 PF00381 PTS HPr component phosphorylation site C7M28_01637 PF14527 WhiA LAGLIDADG-like domain C7M28_01637 PF10298 WhiA N-terminal LAGLIDADG-like domain C7M28_01637 PF02650 WhiA C-terminal HTH domain C7M28_01638 PF01933 Uncharacterised protein family UPF0052 C7M28_01639 PF03668 P-loop ATPase protein family C7M28_01640 PF00293 NUDIX domain C7M28_01641 PF07992 Pyridine nucleotide-disulphide oxidoreductase C7M28_01642 PF00877 NlpC/P60 family C7M28_01644 PF00005 ABC transporter C7M28_01644 PF00664 ABC transporter transmembrane region C7M28_01649 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase C7M28_01649 PF01502 Phosphoribosyl-AMP cyclohydrolase C7M28_01650 PF00977 Histidine biosynthesis protein C7M28_01651 PF00977 Histidine biosynthesis protein C7M28_01652 PF00117 Glutamine amidotransferase class-I C7M28_01653 PF00475 Imidazoleglycerol-phosphate dehydratase C7M28_01654 PF00815 Histidinol dehydrogenase C7M28_01655 PF01634 ATP phosphoribosyltransferase C7M28_01656 PF13393 Histidyl-tRNA synthetase C7M28_01657 PF13529 Peptidase_C39 like family C7M28_01658 PF03211 Pectate lyase C7M28_01659 PF14602 Hexapeptide repeat of succinyl-transferase C7M28_01660 PF13419 Haloacid dehalogenase-like hydrolase C7M28_01661 PF07670 Nucleoside recognition C7M28_01662 PF01790 Prolipoprotein diacylglyceryl transferase C7M28_01663 PF07475 HPr Serine kinase C-terminal domain C7M28_01663 PF02603 HPr Serine kinase N terminus C7M28_01664 PF01979 Amidohydrolase family C7M28_01665 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase C7M28_01666 PF00392 Bacterial regulatory proteins, gntR family C7M28_01666 PF07702 UTRA domain C7M28_01667 PF00149 Calcineurin-like phosphoesterase C7M28_01668 PF01047 MarR family C7M28_01669 PF00067 Cytochrome P450 C7M28_01670 PF16715 Cyclodipeptide synthase C7M28_01671 PF01047 MarR family C7M28_01672 PF07690 Major Facilitator Superfamily C7M28_01673 PF04020 Mycobacterial 4 TMS phage holin, superfamily IV C7M28_01674 PF04024 PspC domain C7M28_01675 PF13349 Putative adhesin C7M28_01678 PF00700 Bacterial flagellin C-terminal helical region C7M28_01679 PF17755 UvrA DNA-binding domain C7M28_01679 PF00005 ABC transporter C7M28_01679 PF17760 UvrA interaction domain C7M28_01680 PF00271 Helicase conserved C-terminal domain C7M28_01680 PF02151 UvrB/uvrC motif C7M28_01680 PF12344 Ultra-violet resistance protein B C7M28_01680 PF17757 UvrB interaction domain C7M28_01680 PF04851 Type III restriction enzyme, res subunit C7M28_01681 PF09964 Uncharacterized protein conserved in bacteria (DUF2198) C7M28_01682 PF00391 PEP-utilising enzyme, mobile domain C7M28_01682 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain C7M28_01683 PF00440 Bacterial regulatory proteins, tetR family C7M28_01684 PF07690 Major Facilitator Superfamily C7M28_01685 PF17820 PDZ domain C7M28_01686 PF17423 Swarming motility protein C7M28_01687 PF17820 PDZ domain C7M28_01687 PF03572 Peptidase family S41 C7M28_01687 PF01471 Putative peptidoglycan binding domain C7M28_01688 PF02687 FtsX-like permease family C7M28_01688 PF18075 FtsX extracellular domain C7M28_01689 PF00005 ABC transporter C7M28_01690 PF13442 Cytochrome C oxidase, cbb3-type, subunit III C7M28_01691 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 C7M28_01691 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) C7M28_01692 PF03462 PCRF domain C7M28_01692 PF00472 RF-1 domain C7M28_01693 PF07516 SecA Wing and Scaffold domain C7M28_01693 PF01043 SecA preprotein cross-linking domain C7M28_01693 PF07517 SecA DEAD-like domain C7M28_01693 PF02810 SEC-C motif C7M28_01694 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus C7M28_01694 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein C7M28_01697 PF02561 Flagellar protein FliS C7M28_01698 PF07195 Flagellar hook-associated protein 2 C-terminus C7M28_01698 PF07196 Flagellin hook IN motif C7M28_01698 PF02465 Flagellar hook-associated protein 2 N-terminus C7M28_01699 PF03646 FlaG protein C7M28_01700 PF00700 Bacterial flagellin C-terminal helical region C7M28_01700 PF00669 Bacterial flagellin N-terminal helical region C7M28_01701 PF02599 Global regulator protein family C7M28_01702 PF02623 FliW protein C7M28_01704 PF00700 Bacterial flagellin C-terminal helical region C7M28_01704 PF00669 Bacterial flagellin N-terminal helical region C7M28_01705 PF00460 Flagella basal body rod protein C7M28_01705 PF06429 Flagellar basal body rod FlgEFG protein C-terminal C7M28_01706 PF05130 FlgN protein C7M28_01707 PF04316 Anti-sigma-28 factor, FlgM C7M28_01710 PF10719 Late competence development protein ComFB C7M28_01711 PF04851 Type III restriction enzyme, res subunit C7M28_01711 PF00271 Helicase conserved C-terminal domain C7M28_01712 PF02645 Uncharacterised protein, DegV family COG1307 C7M28_01713 PF00072 Response regulator receiver domain C7M28_01713 PF00196 Bacterial regulatory proteins, luxR family C7M28_01714 PF05384 Sensor protein DegS C7M28_01714 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C7M28_01714 PF07730 Histidine kinase C7M28_01715 PF09186 Domain of unknown function (DUF1949) C7M28_01715 PF01205 Uncharacterized protein family UPF0029 C7M28_01716 PF03816 Cell envelope-related transcriptional attenuator domain C7M28_01717 PF00953 Glycosyl transferase family 4 C7M28_01719 PF00535 Glycosyl transferase family 2 C7M28_01720 PF02706 Chain length determinant protein C7M28_01721 PF04932 O-Antigen ligase C7M28_01722 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain C7M28_01722 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain C7M28_01722 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain C7M28_01723 PF00534 Glycosyl transferases group 1 C7M28_01723 PF13439 Glycosyltransferase Family 4 C7M28_01724 PF01943 Polysaccharide biosynthesis protein C7M28_01724 PF14667 Polysaccharide biosynthesis C-terminal domain C7M28_01725 PF02397 Bacterial sugar transferase C7M28_01726 PF04122 Putative cell wall binding repeat 2 C7M28_01726 PF01520 N-acetylmuramoyl-L-alanine amidase C7M28_01727 PF04122 Putative cell wall binding repeat 2 C7M28_01727 PF08486 Stage II sporulation protein C7M28_01729 PF03816 Cell envelope-related transcriptional attenuator domain C7M28_01730 PF02350 UDP-N-acetylglucosamine 2-epimerase C7M28_01731 PF00483 Nucleotidyl transferase C7M28_01733 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase C7M28_01733 PF00535 Glycosyl transferase family 2 C7M28_01734 PF00535 Glycosyl transferase family 2 C7M28_01735 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase C7M28_01736 PF00483 Nucleotidyl transferase C7M28_01737 PF00483 Nucleotidyl transferase C7M28_01738 PF00005 ABC transporter C7M28_01739 PF01061 ABC-2 type transporter C7M28_01740 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase C7M28_01741 PF09318 Glycosyl transferase 1 domain A C7M28_01741 PF00534 Glycosyl transferases group 1 C7M28_01742 PF01467 Cytidylyltransferase-like C7M28_01743 PF03808 Glycosyl transferase WecB/TagA/CpsF family C7M28_01744 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase C7M28_01746 PF05036 Sporulation related domain C7M28_01746 PF08239 Bacterial SH3 domain C7M28_01746 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase C7M28_01747 PF01238 Phosphomannose isomerase type I C7M28_01748 PF03323 Bacillus/Clostridium GerA spore germination protein C7M28_01749 PF03845 Spore germination protein C7M28_01750 PF05504 Spore germination B3/ GerAC like, C-terminal C7M28_01751 PF00083 Sugar (and other) transporter C7M28_01752 PF03816 Cell envelope-related transcriptional attenuator domain C7M28_01754 PF00877 NlpC/P60 family C7M28_01756 PF09587 Bacterial capsule synthesis protein PGA_cap C7M28_01757 PF14102 Capsule biosynthesis CapC C7M28_01758 PF08245 Mur ligase middle domain C7M28_01759 PF00356 Bacterial regulatory proteins, lacI family C7M28_01760 PF00294 pfkB family carbohydrate kinase C7M28_01761 PF05025 RbsD / FucU transport protein family C7M28_01762 PF00005 ABC transporter C7M28_01763 PF02653 Branched-chain amino acid transport system / permease component C7M28_01764 PF13407 Periplasmic binding protein domain C7M28_01765 PF08239 Bacterial SH3 domain C7M28_01766 PF13031 Protein of unknown function (DUF3892) C7M28_01767 PF02525 Flavodoxin-like fold C7M28_01768 PF03306 Alpha-acetolactate decarboxylase C7M28_01769 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain C7M28_01769 PF00205 Thiamine pyrophosphate enzyme, central domain C7M28_01769 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain C7M28_01770 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C7M28_01770 PF03466 LysR substrate binding domain C7M28_01771 PF02040 Arsenical pump membrane protein C7M28_01774 PF08757 CotH kinase protein C7M28_01776 PF01613 Flavin reductase like domain C7M28_01777 PF13789 Domain of unknown function (DUF4181) C7M28_01779 PF13404 AsnC-type helix-turn-helix domain C7M28_01779 PF01037 Lrp/AsnC ligand binding domain C7M28_01780 PF02417 Chromate transporter C7M28_01781 PF02417 Chromate transporter C7M28_01783 PF03358 NADPH-dependent FMN reductase C7M28_01784 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C7M28_01784 PF03466 LysR substrate binding domain C7M28_01785 PF04493 Endonuclease V C7M28_01787 PF14449 Pre-toxin TG C7M28_01787 PF04740 LXG domain of WXG superfamily C7M28_01787 PF14431 YwqJ-like deaminase C7M28_01790 PF14449 Pre-toxin TG C7M28_01790 PF14431 YwqJ-like deaminase C7M28_01790 PF04740 LXG domain of WXG superfamily C7M28_01792 PF16888 Domain of unknown function (DUF5082) C7M28_01793 PF09234 Domain of unknown function (DUF1963) C7M28_01794 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain C7M28_01794 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain C7M28_01794 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain C7M28_01796 PF13614 AAA domain C7M28_01797 PF13807 G-rich domain on putative tyrosine kinase C7M28_01797 PF02706 Chain length determinant protein C7M28_01799 PF04434 SWIM zinc finger C7M28_01800 PF12419 SNF2 Helicase protein C7M28_01800 PF00271 Helicase conserved C-terminal domain C7M28_01800 PF00176 SNF2 family N-terminal domain C7M28_01802 PF08220 DeoR-like helix-turn-helix domain C7M28_01802 PF00455 DeoR C terminal sensor domain C7M28_01803 PF00436 Single-strand binding protein family C7M28_01805 PF14183 YwpF-like protein C7M28_01806 PF04203 Sortase domain C7M28_01807 PF06580 Histidine kinase C7M28_01807 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C7M28_01808 PF01741 Large-conductance mechanosensitive channel, MscL C7M28_01809 PF07977 FabA-like domain C7M28_01810 PF18801 response regulator aspartate phosphatase H, N terminal C7M28_01811 PF06429 Flagellar basal body rod FlgEFG protein C-terminal C7M28_01811 PF00460 Flagella basal body rod protein C7M28_01812 PF06429 Flagellar basal body rod FlgEFG protein C-terminal C7M28_01812 PF00460 Flagella basal body rod protein C7M28_01814 PF12116 Stage III sporulation protein D C7M28_01815 PF01047 MarR family C7M28_01816 PF07690 Major Facilitator Superfamily C7M28_01817 PF13229 Right handed beta helix region C7M28_01818 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin C7M28_01819 PF07690 Major Facilitator Superfamily C7M28_01820 PF00857 Isochorismatase family C7M28_01822 PF00909 Ammonium Transporter Family C7M28_01823 PF00543 Nitrogen regulatory protein P-II C7M28_01824 PF01569 PAP2 superfamily C7M28_01825 PF04892 VanZ like family C7M28_01826 PF01551 Peptidase family M23 C7M28_01827 PF00583 Acetyltransferase (GNAT) family C7M28_01828 PF17319 Family of unknown function (DUF5362) C7M28_01829 PF17370 Family of unknown function (DUF5392) C7M28_01830 PF13396 Phospholipase_D-nuclease N-terminal C7M28_01830 PF13091 PLD-like domain C7M28_01831 PF13411 MerR HTH family regulatory protein C7M28_01831 PF07739 TipAS antibiotic-recognition domain C7M28_01832 PF17319 Family of unknown function (DUF5362) C7M28_01833 PF13460 NAD(P)H-binding C7M28_01834 PF02082 Transcriptional regulator C7M28_01835 PF01979 Amidohydrolase family C7M28_01835 PF00449 Urease alpha-subunit, N-terminal domain C7M28_01836 PF00699 Urease beta subunit C7M28_01837 PF00547 Urease, gamma subunit C7M28_01839 PF05532 CsbD-like C7M28_01841 PF17874 MalT-like TPR region C7M28_01841 PF18801 response regulator aspartate phosphatase H, N terminal C7M28_01842 PF04055 Radical SAM superfamily C7M28_01842 PF06463 Molybdenum Cofactor Synthesis C C7M28_01843 PF02634 FdhD/NarQ family C7M28_01845 PF00092 von Willebrand factor type A domain C7M28_01846 PF00092 von Willebrand factor type A domain C7M28_01847 PF08486 Stage II sporulation protein C7M28_01848 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) C7M28_01849 PF08680 TATA-box binding C7M28_01850 PF06612 Protein of unknown function (DUF1146) C7M28_01853 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain C7M28_01853 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain C7M28_01854 PF02874 ATP synthase alpha/beta family, beta-barrel domain C7M28_01854 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain C7M28_01855 PF00231 ATP synthase C7M28_01856 PF02874 ATP synthase alpha/beta family, beta-barrel domain C7M28_01856 PF00306 ATP synthase alpha/beta chain, C terminal domain C7M28_01856 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain C7M28_01857 PF00213 ATP synthase delta (OSCP) subunit C7M28_01858 PF00430 ATP synthase B/B' CF(0) C7M28_01859 PF00137 ATP synthase subunit C C7M28_01860 PF00119 ATP synthase A chain C7M28_01861 PF03899 ATP synthase I chain C7M28_01863 PF00464 Serine hydroxymethyltransferase C7M28_01864 PF04260 Protein of unknown function (DUF436) C7M28_01865 PF02502 Ribose/Galactose Isomerase C7M28_01866 PF01451 Low molecular weight phosphotyrosine protein phosphatase C7M28_01867 PF02659 Putative manganese efflux pump C7M28_01868 PF03481 Putative GTP-binding controlling metal-binding C7M28_01868 PF01300 Telomere recombination C7M28_01870 PF09551 Stage II sporulation protein R (spore_II_R) C7M28_01871 PF17094 Uncharacterised protein family (UPF0715) C7M28_01872 PF17247 Family of unknown function (DUF5316) C7M28_01873 PF05175 Methyltransferase small domain C7M28_01873 PF17827 PrmC N-terminal domain C7M28_01874 PF00472 RF-1 domain C7M28_01874 PF03462 PCRF domain C7M28_01875 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily C7M28_01876 PF13411 MerR HTH family regulatory protein C7M28_01877 PF03547 Membrane transport protein C7M28_01878 PF00390 Malic enzyme, N-terminal domain C7M28_01878 PF03949 Malic enzyme, NAD binding domain C7M28_01879 PF00265 Thymidine kinase C7M28_01880 PF01197 Ribosomal protein L31 C7M28_01881 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain C7M28_01881 PF07497 Rho termination factor, RNA-binding domain C7M28_01881 PF07498 Rho termination factor, N-terminal domain C7M28_01882 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded C7M28_01883 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) C7M28_01884 PF00923 Transaldolase/Fructose-6-phosphate aldolase C7M28_01885 PF01116 Fructose-bisphosphate aldolase class-II C7M28_01886 PF00072 Response regulator receiver domain C7M28_01887 PF10740 Domain of unknown function (DUF2529) C7M28_01888 PF00117 Glutamine amidotransferase class-I C7M28_01888 PF06418 CTP synthase N-terminus C7M28_01889 PF05066 HB1, ASXL, restriction endonuclease HTH domain C7M28_01890 PF02770 Acyl-CoA dehydrogenase, middle domain C7M28_01890 PF02771 Acyl-CoA dehydrogenase, N-terminal domain C7M28_01890 PF00441 Acyl-CoA dehydrogenase, C-terminal domain C7M28_01891 PF02754 Cysteine-rich domain C7M28_01891 PF13183 4Fe-4S dicluster domain C7M28_01892 PF13091 PLD-like domain C7M28_01893 PF03851 UV-endonuclease UvdE C7M28_01895 PF01872 RibD C-terminal domain C7M28_01896 PF00005 ABC transporter C7M28_01896 PF00664 ABC transporter transmembrane region C7M28_01897 PF13091 PLD-like domain C7M28_01897 PF13396 Phospholipase_D-nuclease N-terminal C7M28_01898 PF02665 Nitrate reductase gamma subunit C7M28_01899 PF02613 Nitrate reductase delta subunit C7M28_01900 PF14711 Respiratory nitrate reductase beta C-terminal C7M28_01900 PF13247 4Fe-4S dicluster domain C7M28_01901 PF01568 Molydopterin dinucleotide binding domain C7M28_01901 PF14710 Respiratory nitrate reductase alpha N-terminal C7M28_01901 PF00384 Molybdopterin oxidoreductase C7M28_01903 PF14256 YwiC-like protein C7M28_01904 PF00027 Cyclic nucleotide-binding domain C7M28_01904 PF00325 Bacterial regulatory proteins, crp family C7M28_01905 PF07690 Major Facilitator Superfamily C7M28_01906 PF03485 Arginyl tRNA synthetase N terminal domain C7M28_01906 PF00750 tRNA synthetases class I (R) C7M28_01906 PF05746 DALR anticodon binding domain C7M28_01907 PF09148 Domain of unknown function (DUF1934) C7M28_01908 PF11420 Bacteriocin subtilosin A C7M28_01909 PF13186 Iron-sulfur cluster-binding domain C7M28_01909 PF04055 Radical SAM superfamily C7M28_01909 PF05402 Coenzyme PQQ synthesis protein D (PqqD) C7M28_01911 PF00005 ABC transporter C7M28_01913 PF05193 Peptidase M16 inactive domain C7M28_01914 PF00675 Insulinase (Peptidase family M16) C7M28_01918 PF18801 response regulator aspartate phosphatase H, N terminal C7M28_01919 PF11131 Rap-phr extracellular signalling C7M28_01920 PF04073 Aminoacyl-tRNA editing domain C7M28_01921 PF00491 Arginase family C7M28_01922 PF17284 Spermidine synthase tetramerisation domain C7M28_01923 PF00905 Penicillin binding protein transpeptidase domain C7M28_01923 PF00912 Transglycosylase C7M28_01925 PF08741 YwhD family C7M28_01926 PF02163 Peptidase family M50 C7M28_01927 PF01361 Tautomerase enzyme C7M28_01928 PF01047 MarR family C7M28_01929 PF03129 Anticodon binding domain C7M28_01929 PF02824 TGS domain C7M28_01929 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain C7M28_01929 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) C7M28_01931 PF07690 Major Facilitator Superfamily C7M28_01932 PF02082 Transcriptional regulator C7M28_01934 PF01966 HD domain C7M28_01935 PF07293 Protein of unknown function (DUF1450) C7M28_01937 PF00892 EamA-like transporter family C7M28_01938 PF03099 Biotin/lipoate A/B protein ligase family C7M28_01939 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C7M28_01939 PF03466 LysR substrate binding domain C7M28_01940 PF01515 Phosphate acetyl/butaryl transferase C7M28_01943 PF00155 Aminotransferase class I and II C7M28_01944 PF07690 Major Facilitator Superfamily C7M28_01947 PF07883 Cupin domain C7M28_01949 PF07690 Major Facilitator Superfamily C7M28_01950 PF00324 Amino acid permease C7M28_01951 PF01546 Peptidase family M20/M25/M40 C7M28_01952 PF00171 Aldehyde dehydrogenase family C7M28_01953 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase C7M28_01953 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain C7M28_01954 PF17735 Biofilm surface layer A C7M28_01955 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase C7M28_01956 PF04321 RmlD substrate binding domain C7M28_01957 PF16363 GDP-mannose 4,6 dehydratase C7M28_01958 PF00483 Nucleotidyl transferase C7M28_01959 PF04101 Glycosyltransferase family 28 C-terminal domain C7M28_01960 PF02348 Cytidylyltransferase C7M28_01961 PF03102 NeuB family C7M28_01961 PF08666 SAF domain C7M28_01962 PF00583 Acetyltransferase (GNAT) family C7M28_01963 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family C7M28_01964 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase C7M28_01965 PF00535 Glycosyl transferase family 2 C7M28_01966 PF09671 Spore coat protein (Spore_GerQ) C7M28_01967 PF04241 Protein of unknown function (DUF423) C7M28_01968 PF00860 Permease family C7M28_01969 PF17261 Family of unknown function (DUF5327) C7M28_01970 PF00171 Aldehyde dehydrogenase family C7M28_01971 PF03167 Uracil DNA glycosylase superfamily C7M28_01972 PF00535 Glycosyl transferase family 2 C7M28_01973 PF08543 Phosphomethylpyrimidine kinase C7M28_01975 PF00251 Glycosyl hydrolases family 32 N-terminal domain C7M28_01975 PF08244 Glycosyl hydrolases family 32 C terminal C7M28_01976 PF02378 Phosphotransferase system, EIIC C7M28_01976 PF00367 phosphotransferase system, EIIB C7M28_01977 PF01226 Formate/nitrite transporter C7M28_01978 PF00874 PRD domain C7M28_01978 PF03123 CAT RNA binding domain C7M28_01980 PF00082 Subtilase family C7M28_01980 PF02225 PA domain C7M28_01980 PF05922 Peptidase inhibitor I9 C7M28_01980 PF13860 FlgD Ig-like domain C7M28_01981 PF00296 Luciferase-like monooxygenase C7M28_01982 PF00881 Nitroreductase family C7M28_01983 PF01098 Cell cycle protein C7M28_01984 PF17368 Spore morphogenesis and germination YwcE C7M28_01985 PF03626 Prokaryotic Cytochrome C oxidase subunit IV C7M28_01986 PF00510 Cytochrome c oxidase subunit III C7M28_01987 PF00115 Cytochrome C and Quinol oxidase polypeptide I C7M28_01988 PF00116 Cytochrome C oxidase subunit II, periplasmic domain C7M28_01988 PF02790 Cytochrome C oxidase subunit II, transmembrane domain C7M28_01989 PF04226 Transglycosylase associated protein C7M28_01990 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain C7M28_01990 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain C7M28_01991 PF00288 GHMP kinases N terminal domain C7M28_01991 PF10509 Galactokinase galactose-binding signature C7M28_01991 PF08544 GHMP kinases C terminal C7M28_01992 PF04138 GtrA-like protein C7M28_01993 PF00440 Bacterial regulatory proteins, tetR family C7M28_01994 PF08671 Anti-repressor SinI C7M28_01995 PF04341 Protein of unknown function, DUF485 C7M28_01996 PF00474 Sodium:solute symporter family C7M28_01997 PF01323 DSBA-like thioredoxin domain C7M28_01998 PF04261 Dyp-type peroxidase family C7M28_01998 PF10518 TAT (twin-arginine translocation) pathway signal sequence C7M28_01999 PF09375 Imelysin C7M28_02000 PF03239 Iron permease FTR1 family C7M28_02001 PF02581 Thiamine monophosphate synthase C7M28_02002 PF02110 Hydroxyethylthiazole kinase family C7M28_02003 PF03466 LysR substrate binding domain C7M28_02003 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C7M28_02004 PF03788 LrgA family C7M28_02005 PF04172 LrgB-like family C7M28_02006 PF12832 MFS_1 like family C7M28_02007 PF09962 Uncharacterized conserved protein (DUF2196) C7M28_02008 PF17785 PUA-like domain C7M28_02008 PF10672 S-adenosylmethionine-dependent methyltransferase C7M28_02009 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily C7M28_02011 PF10924 Protein of unknown function (DUF2711) C7M28_02012 PF02378 Phosphotransferase system, EIIC C7M28_02013 PF00082 Subtilase family C7M28_02014 PF02378 Phosphotransferase system, EIIC C7M28_02014 PF00367 phosphotransferase system, EIIB C7M28_02015 PF00874 PRD domain C7M28_02015 PF03123 CAT RNA binding domain C7M28_02016 PF01501 Glycosyl transferase family 8 C7M28_02017 PF09529 Integral membrane protein (intg_mem_TP0381) C7M28_02018 PF01047 MarR family C7M28_02019 PF00579 tRNA synthetases class I (W and Y) C7M28_02019 PF01479 S4 domain C7M28_02020 PF02225 PA domain C7M28_02020 PF04389 Peptidase family M28 C7M28_02023 PF07690 Major Facilitator Superfamily C7M28_02024 PF04607 Region found in RelA / SpoT proteins C7M28_02025 PF01040 UbiA prenyltransferase family C7M28_02026 PF12459 D-Ala-teichoic acid biosynthesis protein C7M28_02027 PF13193 AMP-binding enzyme C-terminal domain C7M28_02027 PF00501 AMP-binding enzyme C7M28_02028 PF03062 MBOAT, membrane-bound O-acyltransferase family C7M28_02029 PF00550 Phosphopantetheine attachment site C7M28_02030 PF04914 DltD protein C7M28_02031 PF00106 short chain dehydrogenase C7M28_02032 PF01063 Amino-transferase class IV C7M28_02033 PF11975 Family 4 glycosyl hydrolase C-terminal domain C7M28_02033 PF02056 Family 4 glycosyl hydrolase C7M28_02034 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit C7M28_02035 PF02378 Phosphotransferase system, EIIC C7M28_02036 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit C7M28_02037 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 C7M28_02037 PF08279 HTH domain C7M28_02037 PF00874 PRD domain C7M28_02037 PF05043 Mga helix-turn-helix domain C7M28_02039 PF02245 Methylpurine-DNA glycosylase (MPG) C7M28_02040 PF06628 Catalase-related immune-responsive C7M28_02040 PF00199 Catalase C7M28_02041 PF07690 Major Facilitator Superfamily C7M28_02042 PF12679 ABC-2 family transporter protein C7M28_02043 PF00005 ABC transporter C7M28_02043 PF13732 Domain of unknown function (DUF4162) C7M28_02044 PF13396 Phospholipase_D-nuclease N-terminal C7M28_02046 PF17280 Family of unknown function (DUF5345) C7M28_02047 PF04542 Sigma-70 region 2 C7M28_02047 PF08281 Sigma-70, region 4 C7M28_02048 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin C7M28_02049 PF01256 Carbohydrate kinase C7M28_02050 PF00664 ABC transporter transmembrane region C7M28_02050 PF00005 ABC transporter C7M28_02051 PF00005 ABC transporter C7M28_02051 PF00664 ABC transporter transmembrane region C7M28_02052 PF02322 Cytochrome bd terminal oxidase subunit II C7M28_02053 PF01654 Cytochrome bd terminal oxidase subunit I C7M28_02054 PF03390 2-hydroxycarboxylate transporter family C7M28_02055 PF01435 Peptidase family M48 C7M28_02057 PF01522 Polysaccharide deacetylase C7M28_02058 PF00005 ABC transporter C7M28_02058 PF03459 TOBE domain C7M28_02058 PF17912 MalK OB fold domain C7M28_02059 PF13556 PucR C-terminal helix-turn-helix domain C7M28_02060 PF00171 Aldehyde dehydrogenase family C7M28_02061 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 C7M28_02061 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) C7M28_02062 PF11611 Domain of unknown function (DUF4352) C7M28_02063 PF16363 GDP-mannose 4,6 dehydratase C7M28_02065 PF07730 Histidine kinase C7M28_02066 PF00072 Response regulator receiver domain C7M28_02066 PF00196 Bacterial regulatory proteins, luxR family C7M28_02067 PF07687 Peptidase dimerisation domain C7M28_02067 PF01546 Peptidase family M20/M25/M40 C7M28_02069 PF04525 LURP-one-related C7M28_02070 PF01717 Cobalamin-independent synthase, Catalytic domain C7M28_02071 PF01717 Cobalamin-independent synthase, Catalytic domain C7M28_02073 PF01144 Coenzyme A transferase C7M28_02074 PF01144 Coenzyme A transferase C7M28_02076 PF08241 Methyltransferase domain C7M28_02077 PF07662 Na+ dependent nucleoside transporter C-terminus C7M28_02077 PF01773 Na+ dependent nucleoside transporter N-terminus C7M28_02080 PF06628 Catalase-related immune-responsive C7M28_02080 PF18011 C-terminal domain found in long catalases C7M28_02080 PF00199 Catalase C7M28_02081 PF03600 Citrate transporter C7M28_02082 PF00722 Glycosyl hydrolases family 16 C7M28_02083 PF00874 PRD domain C7M28_02083 PF03123 CAT RNA binding domain C7M28_02085 PF11700 Vacuole effluxer Atg22 like C7M28_02086 PF03880 DbpA RNA binding domain C7M28_02086 PF00271 Helicase conserved C-terminal domain C7M28_02086 PF00270 DEAD/DEAH box helicase C7M28_02087 PF13472 GDSL-like Lipase/Acylhydrolase family C7M28_02090 PF14176 YxiJ-like protein C7M28_02091 PF10898 Protein of unknown function (DUF2716) C7M28_02098 PF05593 RHS Repeat C7M28_02099 PF00892 EamA-like transporter family C7M28_02100 PF00582 Universal stress protein family C7M28_02101 PF00232 Glycosyl hydrolase family 1 C7M28_02102 PF00367 phosphotransferase system, EIIB C7M28_02102 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 C7M28_02102 PF02378 Phosphotransferase system, EIIC C7M28_02103 PF18593 CdiI immunity protein C7M28_02105 PF04740 LXG domain of WXG superfamily C7M28_02105 PF14449 Pre-toxin TG C7M28_02107 PF16888 Domain of unknown function (DUF5082) C7M28_02108 PF16369 C-terminal lipocalin-like domain C7M28_02108 PF04616 Glycosyl hydrolases family 43 C7M28_02109 PF09021 HutP C7M28_02110 PF00221 Aromatic amino acid lyase C7M28_02111 PF01175 Urocanase Rossmann-like domain C7M28_02111 PF17391 Urocanase N-terminal domain C7M28_02111 PF17392 Urocanase C-terminal domain C7M28_02112 PF01979 Amidohydrolase family C7M28_02113 PF00491 Arginase family C7M28_02114 PF00324 Amino acid permease C7M28_02115 PF02885 Glycosyl transferase family, helical bundle domain C7M28_02115 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain C7M28_02115 PF00591 Glycosyl transferase family, a/b domain C7M28_02116 PF01773 Na+ dependent nucleoside transporter N-terminus C7M28_02116 PF07662 Na+ dependent nucleoside transporter C-terminus C7M28_02117 PF01791 DeoC/LacD family aldolase C7M28_02118 PF04198 Putative sugar-binding domain C7M28_02119 PF06724 Domain of Unknown Function (DUF1206) C7M28_02120 PF04346 Ethanolamine utilisation protein, EutH C7M28_02121 PF03972 MmgE/PrpD family C7M28_02122 PF01546 Peptidase family M20/M25/M40 C7M28_02122 PF07687 Peptidase dimerisation domain C7M28_02123 PF00005 ABC transporter C7M28_02124 PF00528 Binding-protein-dependent transport system inner membrane component C7M28_02125 PF00497 Bacterial extracellular solute-binding proteins, family 3 C7M28_02126 PF00583 Acetyltransferase (GNAT) family C7M28_02127 PF00296 Luciferase-like monooxygenase C7M28_02129 PF02275 Linear amide C-N hydrolases, choloylglycine hydrolase family C7M28_02132 PF11631 Protein of unknown function (DUF3255) C7M28_02136 PF01497 Periplasmic binding protein C7M28_02137 PF06486 Protein of unknown function (DUF1093) C7M28_02138 PF02687 FtsX-like permease family C7M28_02139 PF00005 ABC transporter C7M28_02140 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C7M28_02141 PF00072 Response regulator receiver domain C7M28_02141 PF00486 Transcriptional regulatory protein, C terminal C7M28_02142 PF01116 Fructose-bisphosphate aldolase class-II C7M28_02143 PF01261 Xylose isomerase-like TIM barrel C7M28_02144 PF01261 Xylose isomerase-like TIM barrel C7M28_02145 PF01408 Oxidoreductase family, NAD-binding Rossmann fold C7M28_02145 PF02894 Oxidoreductase family, C-terminal alpha/beta domain C7M28_02146 PF07690 Major Facilitator Superfamily C7M28_02147 PF01261 Xylose isomerase-like TIM barrel C7M28_02148 PF00205 Thiamine pyrophosphate enzyme, central domain C7M28_02148 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain C7M28_02148 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain C7M28_02149 PF00294 pfkB family carbohydrate kinase C7M28_02150 PF04962 KduI/IolB family C7M28_02151 PF00171 Aldehyde dehydrogenase family C7M28_02152 PF08220 DeoR-like helix-turn-helix domain C7M28_02152 PF00455 DeoR C terminal sensor domain C7M28_02153 PF00248 Aldo/keto reductase family C7M28_02155 PF10850 Protein of unknown function (DUF2653) C7M28_02156 PF00083 Sugar (and other) transporter C7M28_02157 PF00183 Hsp90 protein C7M28_02160 PF00440 Bacterial regulatory proteins, tetR family C7M28_02161 PF00171 Aldehyde dehydrogenase family C7M28_02162 PF00583 Acetyltransferase (GNAT) family C7M28_02163 PF08007 Cupin superfamily protein C7M28_02164 PF08241 Methyltransferase domain C7M28_02165 PF05402 Coenzyme PQQ synthesis protein D (PqqD) C7M28_02167 PF00733 Asparagine synthase C7M28_02167 PF13537 Glutamine amidotransferase domain C7M28_02168 PF07690 Major Facilitator Superfamily C7M28_02169 PF13360 PQQ-like domain C7M28_02169 PF01011 PQQ enzyme repeat C7M28_02169 PF13570 PQQ-like domain C7M28_02170 PF17369 Family of unknown function (DUF5391) C7M28_02171 PF06271 RDD family C7M28_02172 PF04235 Protein of unknown function (DUF418) C7M28_02173 PF07883 Cupin domain C7M28_02174 PF00440 Bacterial regulatory proteins, tetR family C7M28_02175 PF00106 short chain dehydrogenase C7M28_02176 PF01047 MarR family C7M28_02177 PF03788 LrgA family C7M28_02178 PF04172 LrgB-like family C7M28_02179 PF04230 Polysaccharide pyruvyl transferase C7M28_02180 PF02595 Glycerate kinase family C7M28_02181 PF00392 Bacterial regulatory proteins, gntR family C7M28_02181 PF07729 FCD domain C7M28_02182 PF00370 FGGY family of carbohydrate kinases, N-terminal domain C7M28_02182 PF02782 FGGY family of carbohydrate kinases, C-terminal domain C7M28_02183 PF02447 GntP family permease C7M28_02184 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase C7M28_02184 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain C7M28_02185 PF00578 AhpC/TSA family C7M28_02186 PF13192 Thioredoxin domain C7M28_02186 PF07992 Pyridine nucleotide-disulphide oxidoreductase C7M28_02187 PF00232 Glycosyl hydrolase family 1 C7M28_02188 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 C7M28_02189 PF07702 UTRA domain C7M28_02189 PF00392 Bacterial regulatory proteins, gntR family C7M28_02191 PF00005 ABC transporter C7M28_02192 PF06874 Firmicute fructose-1,6-bisphosphatase C7M28_02195 PF02590 Predicted SPOUT methyltransferase C7M28_02196 PF14116 YyzF-like protein C7M28_02198 PF00107 Zinc-binding dehydrogenase C7M28_02198 PF08240 Alcohol dehydrogenase GroES-like domain C7M28_02200 PF10852 Protein of unknown function (DUF2651) C7M28_02203 PF00583 Acetyltransferase (GNAT) family C7M28_02204 PF18801 response regulator aspartate phosphatase H, N terminal C7M28_02206 PF00491 Arginase family C7M28_02207 PF00324 Amino acid permease C7M28_02208 PF00202 Aminotransferase class-III C7M28_02211 PF17418 Sporulation delaying protein SdpA C7M28_02212 PF13630 SdpI/YhfL protein family C7M28_02212 PF07853 Protein of unknown function (DUF1648) C7M28_02213 PF01022 Bacterial regulatory protein, arsR family C7M28_02214 PF13426 PAS domain C7M28_02214 PF00158 Sigma-54 interaction domain C7M28_02214 PF02954 Bacterial regulatory protein, Fis family C7M28_02215 PF16736 Single Cache-like C7M28_02215 PF00989 PAS fold C7M28_02215 PF00512 His Kinase A (phospho-acceptor) domain C7M28_02215 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C7M28_02216 PF00072 Response regulator receiver domain C7M28_02216 PF00486 Transcriptional regulatory protein, C terminal C7M28_02219 PF13180 PDZ domain C7M28_02220 PF00753 Metallo-beta-lactamase superfamily C7M28_02221 PF09648 YycH protein C7M28_02222 PF07435 YycH protein C7M28_02223 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C7M28_02223 PF13426 PAS domain C7M28_02223 PF00672 HAMP domain C7M28_02223 PF00512 His Kinase A (phospho-acceptor) domain C7M28_02224 PF00072 Response regulator receiver domain C7M28_02224 PF00486 Transcriptional regulatory protein, C terminal C7M28_02229 PF00709 Adenylosuccinate synthetase C7M28_02230 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily C7M28_02231 PF03796 DnaB-like helicase C terminal domain C7M28_02231 PF00772 DnaB-like helicase N terminal domain C7M28_02232 PF09954 Uncharacterized protein conserved in bacteria (DUF2188) C7M28_02234 PF14174 YycC-like protein C7M28_02235 PF07690 Major Facilitator Superfamily C7M28_02236 PF13231 Dolichyl-phosphate-mannose-protein mannosyltransferase C7M28_02237 PF01281 Ribosomal protein L9, N-terminal domain C7M28_02237 PF03948 Ribosomal protein L9, C-terminal domain C7M28_02238 PF02272 DHHA1 domain C7M28_02238 PF01368 DHH family C7M28_02239 PF09991 Predicted membrane protein (DUF2232) C7M28_02241 PF07875 Coat F domain C7M28_02242 PF01638 HxlR-like helix-turn-helix C7M28_02243 PF01368 DHH family C7M28_02243 PF02833 DHHA2 domain C7M28_02246 PF07690 Major Facilitator Superfamily C7M28_02247 PF06445 GyrI-like small molecule binding domain C7M28_02247 PF13411 MerR HTH family regulatory protein C7M28_02249 PF13474 SnoaL-like domain C7M28_02250 PF00805 Pentapeptide repeats (8 copies) C7M28_02251 PF07690 Major Facilitator Superfamily C7M28_02252 PF03466 LysR substrate binding domain C7M28_02252 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C7M28_02253 PF13673 Acetyltransferase (GNAT) domain C7M28_02255 PF00753 Metallo-beta-lactamase superfamily C7M28_02256 PF01047 MarR family C7M28_02257 PF13673 Acetyltransferase (GNAT) domain C7M28_02259 PF00583 Acetyltransferase (GNAT) family C7M28_02260 PF04237 YjbR C7M28_02261 PF01872 RibD C-terminal domain C7M28_02262 PF07690 Major Facilitator Superfamily C7M28_02263 PF03190 Protein of unknown function, DUF255 C7M28_02264 PF13411 MerR HTH family regulatory protein C7M28_02265 PF00892 EamA-like transporter family C7M28_02266 PF03190 Protein of unknown function, DUF255 C7M28_02269 PF14729 Domain of unknown function with cystatin-like fold (DUF4467) C7M28_02271 PF00877 NlpC/P60 family C7M28_02273 PF08960 Domain of unknown function (DUF1874) C7M28_02275 PF12648 TcpE family C7M28_02277 PF12642 Conjugative transposon protein TcpC C7M28_02284 PF02486 Replication initiation factor C7M28_02284 PF18106 Rolling Circle replication initiation protein N-terminal domain C7M28_02286 PF06125 Bacterial protein of unknown function (DUF961) C7M28_02289 PF01381 Helix-turn-helix C7M28_02290 PF06114 IrrE N-terminal-like domain C7M28_02291 PF18801 response regulator aspartate phosphatase H, N terminal C7M28_02293 PF03190 Protein of unknown function, DUF255 C7M28_02295 PF00145 C-5 cytosine-specific DNA methylase C7M28_02295 PF01381 Helix-turn-helix C7M28_02296 PF03190 Protein of unknown function, DUF255 C7M28_02297 PF03190 Protein of unknown function, DUF255 C7M28_02298 PF02517 CPBP intramembrane metalloprotease C7M28_02299 PF00083 Sugar (and other) transporter C7M28_02300 PF14602 Hexapeptide repeat of succinyl-transferase C7M28_02300 PF12464 Maltose acetyltransferase C7M28_02301 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily C7M28_02302 PF00356 Bacterial regulatory proteins, lacI family C7M28_02302 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family C7M28_02303 PF03372 Endonuclease/Exonuclease/phosphatase family C7M28_02304 PF01084 Ribosomal protein S18 C7M28_02305 PF00436 Single-strand binding protein family C7M28_02306 PF01250 Ribosomal protein S6 C7M28_02307 PF01926 50S ribosome-binding GTPase C7M28_02307 PF06071 Protein of unknown function (DUF933) C7M28_02308 PF01568 Molydopterin dinucleotide binding domain C7M28_02308 PF00384 Molybdopterin oxidoreductase C7M28_02308 PF04879 Molybdopterin oxidoreductase Fe4S4 domain C7M28_02309 PF06107 Bacterial protein of unknown function (DUF951) C7M28_02311 PF06866 Protein of unknown function (DUF1256) C7M28_02312 PF02195 ParB-like nuclease domain C7M28_02312 PF17762 HTH domain found in ParB protein C7M28_02313 PF13614 AAA domain C7M28_02314 PF06713 Bacterial PH domain C7M28_02315 PF02195 ParB-like nuclease domain C7M28_02315 PF17762 HTH domain found in ParB protein C7M28_02316 PF02527 rRNA small subunit methyltransferase G C7M28_02317 PF01134 Glucose inhibited division protein A C7M28_02317 PF13932 GidA associated domain C7M28_02318 PF01926 50S ribosome-binding GTPase C7M28_02318 PF10396 GTP-binding protein TrmE N-terminus C7M28_02318 PF12631 MnmE helical domain C7M28_02319 PF14804 Jag N-terminus C7M28_02319 PF01424 R3H domain C7M28_02320 PF02096 60Kd inner membrane protein C7M28_02321 PF00825 Ribonuclease P C7M28_02322 PF11638 DnaA N-terminal domain C7M28_02322 PF00308 Bacterial dnaA protein C7M28_02322 PF08299 Bacterial dnaA protein helix-turn-helix C7M28_02323 PF00712 DNA polymerase III beta subunit, N-terminal domain C7M28_02323 PF02768 DNA polymerase III beta subunit, C-terminal domain C7M28_02323 PF02767 DNA polymerase III beta subunit, central domain C7M28_02325 PF02463 RecF/RecN/SMC N terminal domain C7M28_02326 PF04025 Domain of unknown function (DUF370) C7M28_02327 PF01751 Toprim domain C7M28_02327 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C7M28_02327 PF00986 DNA gyrase B subunit, carboxyl terminus C7M28_02327 PF00204 DNA gyrase B C7M28_02328 PF03989 DNA gyrase C-terminal domain, beta-propeller C7M28_02328 PF00521 DNA gyrase/topoisomerase IV, subunit A C7M28_02334 PF14175 YaaC-like Protein C7M28_02335 PF00571 CBS domain C7M28_02335 PF00478 IMP dehydrogenase / GMP reductase domain C7M28_02336 PF07943 Penicillin-binding protein 5, C-terminal domain C7M28_02336 PF00768 D-alanyl-D-alanine carboxypeptidase C7M28_02337 PF01680 SOR/SNZ family C7M28_02338 PF01174 SNO glutamine amidotransferase family C7M28_02339 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) C7M28_02339 PF02403 Seryl-tRNA synthetase N-terminal domain C7M28_02341 PF01712 Deoxynucleoside kinase C7M28_02342 PF01712 Deoxynucleoside kinase C7M28_02343 PF00704 Glycosyl hydrolases family 18 C7M28_02343 PF01476 LysM domain C7M28_02344 PF00857 Isochorismatase family C7M28_02345 PF14437 MafB19-like deaminase C7M28_02346 PF12169 DNA polymerase III subunits gamma and tau domain III C7M28_02347 PF02575 YbaB/EbfC DNA-binding family C7M28_02348 PF02132 RecR protein C7M28_02348 PF13662 Toprim domain C7M28_02349 PF10704 Protein of unknown function (DUF2508) C7M28_02350 PF07441 SigmaK-factor processing regulatory protein BofA C7M28_02356 PF10764 Inhibitor of sigma-G Gin C7M28_02357 PF10112 5-bromo-4-chloroindolyl phosphate hydrolysis protein C7M28_02358 PF05816 Toxic anion resistance protein (TelA) C7M28_02359 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain C7M28_02359 PF01276 Orn/Lys/Arg decarboxylase, major domain C7M28_02360 PF02223 Thymidylate kinase C7M28_02361 PF06153 Cyclic-di-AMP receptor C7M28_02362 PF03885 Protein of unknown function (DUF327) C7M28_02363 PF09115 DNA polymerase III, delta subunit, C terminal C7M28_02364 PF04468 PSP1 C-terminal conserved region C7M28_02365 PF06156 Initiation control protein YabA C7M28_02366 PF05175 Methyltransferase small domain C7M28_02367 PF01541 GIY-YIG catalytic domain C7M28_02368 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases C7M28_02369 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin C7M28_02369 PF18277 AbrB C-terminal domain C7M28_02370 PF08264 Anticodon-binding domain of tRNA C7M28_02370 PF09334 tRNA synthetases class I (M) C7M28_02370 PF01588 Putative tRNA binding domain C7M28_02371 PF01026 TatD related DNase C7M28_02372 PF03990 G5-linked-Ubiquitin-like domain C7M28_02372 PF06725 3D domain C7M28_02372 PF07501 G5 domain C7M28_02373 PF13662 Toprim domain C7M28_02373 PF13331 Domain of unknown function (DUF4093) C7M28_02374 PF00398 Ribosomal RNA adenine dimethylase C7M28_02375 PF05582 YabG peptidase U57 C7M28_02376 PF06257 Biofilm formation stimulator VEG C7M28_02377 PF00269 Small, acid-soluble spore proteins, alpha/beta type C7M28_02378 PF00288 GHMP kinases N terminal domain C7M28_02378 PF08544 GHMP kinases C terminal C7M28_02379 PF00156 Phosphoribosyl transferase domain C7M28_02379 PF09182 Bacterial purine repressor, N-terminal C7M28_02380 PF01042 Endoribonuclease L-PSP C7M28_02381 PF04026 SpoVG C7M28_02382 PF00132 Bacterial transferase hexapeptide (six repeats) C7M28_02382 PF00483 Nucleotidyl transferase C7M28_02383 PF14572 Phosphoribosyl synthetase-associated domain C7M28_02383 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase C7M28_02384 PF01386 Ribosomal L25p family C7M28_02384 PF14693 Ribosomal protein TL5, C-terminal domain C7M28_02385 PF01195 Peptidyl-tRNA hydrolase C7M28_02386 PF10955 Protein of unknown function (DUF2757) C7M28_02387 PF03461 TRCF domain C7M28_02387 PF00271 Helicase conserved C-terminal domain C7M28_02387 PF00270 DEAD/DEAH box helicase C7M28_02387 PF02559 CarD-like/TRCF domain C7M28_02387 PF17757 UvrB interaction domain C7M28_02388 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin C7M28_02388 PF15714 Stage V sporulation protein T C-terminal, transcription factor C7M28_02389 PF14667 Polysaccharide biosynthesis C-terminal domain C7M28_02389 PF01943 Polysaccharide biosynthesis protein C7M28_02390 PF03819 MazG nucleotide pyrophosphohydrolase domain C7M28_02390 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases C7M28_02391 PF01479 S4 domain C7M28_02392 PF07873 YabP family C7M28_02393 PF09578 Spore cortex protein YabQ (Spore_YabQ) C7M28_02394 PF04977 Septum formation initiator C7M28_02395 PF00575 S1 RNA binding domain C7M28_02398 PF07228 Stage II sporulation protein E (SpoIIE) C7M28_02399 PF00092 von Willebrand factor type A domain C7M28_02400 PF00069 Protein kinase domain C7M28_02401 PF01171 PP-loop family C7M28_02401 PF11734 TilS substrate C-terminal domain C7M28_02401 PF09179 TilS substrate binding domain C7M28_02403 PF01434 Peptidase family M41 C7M28_02403 PF17862 AAA+ lid domain C7M28_02403 PF06480 FtsH Extracellular C7M28_02403 PF00004 ATPase family associated with various cellular activities (AAA) C7M28_02404 PF03309 Type III pantothenate kinase C7M28_02405 PF01430 Hsp33 protein C7M28_02406 PF13145 PPIC-type PPIASE domain C7M28_02407 PF00291 Pyridoxal-phosphate dependent enzyme C7M28_02408 PF00425 chorismate binding enzyme C7M28_02408 PF04715 Anthranilate synthase component I, N terminal region C7M28_02409 PF00117 Glutamine amidotransferase class-I C7M28_02410 PF01063 Amino-transferase class IV C7M28_02411 PF00809 Pterin binding enzyme C7M28_02412 PF02152 Dihydroneopterin aldolase C7M28_02413 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) C7M28_02414 PF01381 Helix-turn-helix C7M28_02415 PF01207 Dihydrouridine synthase (Dus) C7M28_02416 PF00152 tRNA synthetases class II (D, K and N) C7M28_02416 PF01336 OB-fold nucleic acid binding domain C7M28_02432 PF05848 CtsR N-terminal HTH domain C7M28_02432 PF17727 CtsR C-terminal dimerization domain C7M28_02433 PF02151 UvrB/uvrC motif C7M28_02434 PF00217 ATP:guanido phosphotransferase, C-terminal catalytic domain C7M28_02435 PF02861 Clp amino terminal domain, pathogenicity island component C7M28_02435 PF17871 AAA lid domain C7M28_02435 PF07724 AAA domain (Cdc48 subfamily) C7M28_02435 PF10431 C-terminal, D2-small domain, of ClpB protein C7M28_02435 PF00004 ATPase family associated with various cellular activities (AAA) C7M28_02436 PF18073 Rubredoxin metal binding domain C7M28_02437 PF10635 DisA bacterial checkpoint controller linker region C7M28_02437 PF02457 DisA bacterial checkpoint controller nucleotide-binding C7M28_02439 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase C7M28_02440 PF02542 YgbB family C7M28_02441 PF00749 tRNA synthetases class I (E and Q), catalytic domain C7M28_02442 PF00132 Bacterial transferase hexapeptide (six repeats) C7M28_02442 PF06426 Serine acetyltransferase, N-terminal C7M28_02443 PF01406 tRNA synthetases class I (C) catalytic domain C7M28_02443 PF09190 DALR domain C7M28_02444 PF00636 Ribonuclease III domain C7M28_02445 PF00588 SpoU rRNA Methylase family C7M28_02445 PF08032 RNA 2'-O ribose methyltransferase substrate binding C7M28_02446 PF05991 YacP-like NYN domain C7M28_02447 PF08281 Sigma-70, region 4 C7M28_02447 PF04542 Sigma-70 region 2 C7M28_02448 PF00584 SecE/Sec61-gamma subunits of protein translocation complex C7M28_02449 PF02357 Transcription termination factor nusG C7M28_02449 PF00467 KOW motif C7M28_02450 PF00298 Ribosomal protein L11, RNA binding domain C7M28_02450 PF03946 Ribosomal protein L11, N-terminal domain C7M28_02451 PF00687 Ribosomal protein L1p/L10e family C7M28_02452 PF00466 Ribosomal protein L10 C7M28_02453 PF16320 Ribosomal protein L7/L12 dimerisation domain C7M28_02453 PF00542 Ribosomal protein L7/L12 C-terminal domain C7M28_02454 PF05175 Methyltransferase small domain C7M28_02455 PF04563 RNA polymerase beta subunit C7M28_02455 PF04561 RNA polymerase Rpb2, domain 2 C7M28_02455 PF04565 RNA polymerase Rpb2, domain 3 C7M28_02455 PF10385 RNA polymerase beta subunit external 1 domain C7M28_02455 PF00562 RNA polymerase Rpb2, domain 6 C7M28_02455 PF04560 RNA polymerase Rpb2, domain 7 C7M28_02456 PF05000 RNA polymerase Rpb1, domain 4 C7M28_02456 PF04998 RNA polymerase Rpb1, domain 5 C7M28_02456 PF00623 RNA polymerase Rpb1, domain 2 C7M28_02456 PF04983 RNA polymerase Rpb1, domain 3 C7M28_02456 PF04997 RNA polymerase Rpb1, domain 1 C7M28_02457 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family C7M28_02458 PF00164 Ribosomal protein S12/S23 C7M28_02459 PF00177 Ribosomal protein S7p/S5e C7M28_02460 PF03144 Elongation factor Tu domain 2 C7M28_02460 PF00679 Elongation factor G C-terminus C7M28_02460 PF14492 Elongation Factor G, domain II C7M28_02460 PF03764 Elongation factor G, domain IV C7M28_02460 PF00009 Elongation factor Tu GTP binding domain C7M28_02461 PF00009 Elongation factor Tu GTP binding domain C7M28_02461 PF03143 Elongation factor Tu C-terminal domain C7M28_02461 PF03144 Elongation factor Tu domain 2 C7M28_02462 PF12146 Serine aminopeptidase, S33 C7M28_02463 PF00338 Ribosomal protein S10p/S20e C7M28_02464 PF00297 Ribosomal protein L3 C7M28_02465 PF00573 Ribosomal protein L4/L1 family C7M28_02466 PF00276 Ribosomal protein L23 C7M28_02467 PF00181 Ribosomal Proteins L2, RNA binding domain C7M28_02467 PF03947 Ribosomal Proteins L2, C-terminal domain C7M28_02468 PF00203 Ribosomal protein S19 C7M28_02469 PF00237 Ribosomal protein L22p/L17e C7M28_02470 PF07650 KH domain C7M28_02470 PF00189 Ribosomal protein S3, C-terminal domain C7M28_02471 PF00252 Ribosomal protein L16p/L10e C7M28_02472 PF00831 Ribosomal L29 protein C7M28_02473 PF00366 Ribosomal protein S17 C7M28_02474 PF00238 Ribosomal protein L14p/L23e C7M28_02475 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 C7M28_02475 PF00467 KOW motif C7M28_02476 PF00281 Ribosomal protein L5 C7M28_02476 PF00673 ribosomal L5P family C-terminus C7M28_02477 PF00253 Ribosomal protein S14p/S29e C7M28_02478 PF00410 Ribosomal protein S8 C7M28_02479 PF00347 Ribosomal protein L6 C7M28_02480 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast C7M28_02481 PF03719 Ribosomal protein S5, C-terminal domain C7M28_02481 PF00333 Ribosomal protein S5, N-terminal domain C7M28_02482 PF00327 Ribosomal protein L30p/L7e C7M28_02483 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A C7M28_02484 PF00344 SecY translocase C7M28_02485 PF05191 Adenylate kinase, active site lid C7M28_02486 PF00557 Metallopeptidase family M24 C7M28_02487 PF01176 Translation initiation factor 1A / IF-1 C7M28_02488 PF00444 Ribosomal protein L36 C7M28_02489 PF00416 Ribosomal protein S13/S18 C7M28_02490 PF00411 Ribosomal protein S11 C7M28_02491 PF01000 RNA polymerase Rpb3/RpoA insert domain C7M28_02491 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain C7M28_02491 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain C7M28_02492 PF01196 Ribosomal protein L17 C7M28_02493 PF00005 ABC transporter C7M28_02494 PF00005 ABC transporter C7M28_02495 PF02361 Cobalt transport protein C7M28_02496 PF01416 tRNA pseudouridine synthase C7M28_02497 PF00572 Ribosomal protein L13 C7M28_02498 PF00380 Ribosomal protein S9/S16 C7M28_02499 PF08241 Methyltransferase domain C7M28_02500 PF10730 Protein of unknown function (DUF2521) C7M28_02501 PF01520 N-acetylmuramoyl-L-alanine amidase C7M28_02502 PF10609 NUBPL iron-transfer P-loop NTPase C7M28_02503 PF17898 Spore germination GerD central core domain C7M28_02504 PF14089 KinB-signalling pathway activation in sporulation C7M28_02505 PF01522 Polysaccharide deacetylase C7M28_02521 PF00916 Sulfate permease family C7M28_02521 PF01740 STAS domain C7M28_02523 PF01758 Sodium Bile acid symporter family C7M28_02524 PF00756 Putative esterase C7M28_02525 PF01032 FecCD transport family C7M28_02526 PF01032 FecCD transport family C7M28_02527 PF01497 Periplasmic binding protein C7M28_02528 PF12833 Helix-turn-helix domain C7M28_02528 PF01497 Periplasmic binding protein C7M28_02529 PF07075 Protein of unknown function (DUF1343) C7M28_02530 PF00933 Glycosyl hydrolase family 3 N terminal domain C7M28_02530 PF01915 Glycosyl hydrolase family 3 C-terminal domain C7M28_02531 PF00144 Beta-lactamase C7M28_02532 PF02378 Phosphotransferase system, EIIC C7M28_02532 PF00367 phosphotransferase system, EIIB C7M28_02533 PF01418 Helix-turn-helix domain, rpiR family C7M28_02533 PF01380 SIS domain C7M28_02534 PF01380 SIS domain C7M28_02536 PF04463 Protein of unknown function (DUF523) C7M28_02542 PF04542 Sigma-70 region 2 C7M28_02542 PF08281 Sigma-70, region 4 C7M28_02543 PF13490 Putative zinc-finger C7M28_02544 PF02457 DisA bacterial checkpoint controller nucleotide-binding C7M28_02545 PF07949 YbbR-like protein C7M28_02546 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain C7M28_02546 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III C7M28_02546 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I C7M28_02546 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II C7M28_02547 PF01380 SIS domain C7M28_02548 PF07934 8-oxoguanine DNA glycosylase, N-terminal domain C7M28_02548 PF00730 HhH-GPD superfamily base excision DNA repair protein C7M28_02549 PF02805 Metal binding domain of Ada C7M28_02549 PF12833 Helix-turn-helix domain C7M28_02550 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain C7M28_02550 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain C7M28_02551 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus C7M28_02551 PF00361 Proton-conducting membrane transporter C7M28_02552 PF10070 Uncharacterized protein conserved in bacteria (DUF2309) C7M28_02556 PF10057 Uncharacterized conserved protein (DUF2294) C7M28_02558 PF07690 Major Facilitator Superfamily C7M28_02560 PF13186 Iron-sulfur cluster-binding domain C7M28_02560 PF04055 Radical SAM superfamily C7M28_02561 PF02517 CPBP intramembrane metalloprotease C7M28_02562 PF00005 ABC transporter C7M28_02565 PF13905 Thioredoxin-like C7M28_02566 PF00561 alpha/beta hydrolase fold C7M28_02567 PF00072 Response regulator receiver domain C7M28_02567 PF00486 Transcriptional regulatory protein, C terminal C7M28_02568 PF00512 His Kinase A (phospho-acceptor) domain C7M28_02568 PF00672 HAMP domain C7M28_02570 PF00069 Protein kinase domain C7M28_02572 PF16226 Domain of unknown function (DUF4885) C7M28_02573 PF00324 Amino acid permease C7M28_02574 PF17334 Minor curli fiber component A C7M28_02575 PF17340 Family of unknown function (DUF5370) C7M28_02576 PF00905 Penicillin binding protein transpeptidase domain C7M28_02577 PF00067 Cytochrome P450 C7M28_02579 PF13520 Amino acid permease C7M28_02580 PF03009 Glycerophosphoryl diester phosphodiesterase family C7M28_02581 PF07690 Major Facilitator Superfamily C7M28_02582 PF10852 Protein of unknown function (DUF2651) C7M28_02583 PF01047 MarR family C7M28_02583 PF00583 Acetyltransferase (GNAT) family C7M28_02584 PF07690 Major Facilitator Superfamily C7M28_02587 PF08924 Domain of unknown function (DUF1906) C7M28_02587 PF01471 Putative peptidoglycan binding domain C7M28_02588 PF00892 EamA-like transporter family C7M28_02589 PF12833 Helix-turn-helix domain C7M28_02589 PF02311 AraC-like ligand binding domain C7M28_02590 PF02222 ATP-grasp domain C7M28_02591 PF00089 Trypsin C7M28_02592 PF10794 Protein of unknown function (DUF2606) C7M28_02593 PF12697 Alpha/beta hydrolase family C7M28_02594 PF01066 CDP-alcohol phosphatidyltransferase C7M28_02595 PF09335 SNARE associated Golgi protein C7M28_02596 PF02666 Phosphatidylserine decarboxylase C7M28_02598 PF05139 Erythromycin esterase C7M28_02600 PF00375 Sodium:dicarboxylate symporter family C7M28_02601 PF02378 Phosphotransferase system, EIIC C7M28_02601 PF00367 phosphotransferase system, EIIB C7M28_02601 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 C7M28_02602 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase C7M28_02603 PF00392 Bacterial regulatory proteins, gntR family C7M28_02603 PF07702 UTRA domain C7M28_02604 PF07853 Protein of unknown function (DUF1648) C7M28_02605 PF01063 Amino-transferase class IV C7M28_02606 PF00324 Amino acid permease C7M28_02607 PF02574 Homocysteine S-methyltransferase C7M28_02608 PF01235 Sodium:alanine symporter family C7M28_02609 PF04960 Glutaminase C7M28_02610 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C7M28_02611 PF08664 YcbB domain C7M28_02611 PF00072 Response regulator receiver domain C7M28_02612 PF00701 Dihydrodipicolinate synthetase family C7M28_02613 PF00171 Aldehyde dehydrogenase family C7M28_02614 PF07690 Major Facilitator Superfamily C7M28_02615 PF13378 Enolase C-terminal domain-like C7M28_02616 PF07729 FCD domain C7M28_02616 PF00392 Bacterial regulatory proteins, gntR family C7M28_02617 PF08666 SAF domain C7M28_02617 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus C7M28_02618 PF01636 Phosphotransferase enzyme family C7M28_02619 PF15777 Tryptophan RNA-binding attenuator protein inhibitory protein C7M28_02620 PF00892 EamA-like transporter family C7M28_02621 PF00486 Transcriptional regulatory protein, C terminal C7M28_02621 PF00072 Response regulator receiver domain C7M28_02622 PF00512 His Kinase A (phospho-acceptor) domain C7M28_02622 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C7M28_02623 PF00005 ABC transporter C7M28_02625 PF10710 Protein of unknown function (DUF2512) C7M28_02626 PF07486 Cell Wall Hydrolase C7M28_02627 PF10138 vWA found in TerF C terminus C7M28_02628 PF09423 PhoD-like phosphatase C7M28_02628 PF16655 PhoD-like phosphatase, N-terminal domain C7M28_02629 PF02416 mttA/Hcf106 family C7M28_02630 PF00902 Sec-independent protein translocase protein (TatC) C7M28_02631 PF01470 Pyroglutamyl peptidase C7M28_02632 PF00266 Aminotransferase class-V C7M28_02633 PF07690 Major Facilitator Superfamily C7M28_02634 PF00440 Bacterial regulatory proteins, tetR family C7M28_02635 PF17763 Glutaminase/Asparaginase C-terminal domain C7M28_02635 PF00710 Asparaginase, N-terminal C7M28_02636 PF01674 Lipase (class 2) C7M28_02637 PF06271 RDD family C7M28_02638 PF05225 helix-turn-helix, Psq domain C7M28_02638 PF02810 SEC-C motif C7M28_02639 PF14501 GHKL domain C7M28_02640 PF04397 LytTr DNA-binding domain C7M28_02640 PF00072 Response regulator receiver domain C7M28_02641 PF00005 ABC transporter C7M28_02642 PF12679 ABC-2 family transporter protein C7M28_02643 PF00248 Aldo/keto reductase family C7M28_02644 PF00248 Aldo/keto reductase family C7M28_02645 PF17118 Domain of unknown function (DUF5105) C7M28_02645 PF11611 Domain of unknown function (DUF4352) C7M28_02646 PF16244 Domain of unknown function (DUF4901) C7M28_02647 PF16244 Domain of unknown function (DUF4901) C7M28_02648 PF13539 D-alanyl-D-alanine carboxypeptidase C7M28_02649 PF18801 response regulator aspartate phosphatase H, N terminal C7M28_02651 PF00128 Alpha amylase, catalytic domain C7M28_02652 PF01297 Zinc-uptake complex component A periplasmic C7M28_02653 PF00005 ABC transporter C7M28_02654 PF00950 ABC 3 transport family C7M28_02655 PF00296 Luciferase-like monooxygenase C7M28_02656 PF02342 TerD domain C7M28_02657 PF02342 TerD domain C7M28_02658 PF02342 TerD domain C7M28_02659 PF03741 Integral membrane protein TerC family C7M28_02660 PF14266 Putative component of 'biosynthetic module' C7M28_02661 PF05816 Toxic anion resistance protein (TelA) C7M28_02662 PF07690 Major Facilitator Superfamily C7M28_02663 PF07690 Major Facilitator Superfamily C7M28_02665 PF00571 CBS domain C7M28_02665 PF00005 ABC transporter C7M28_02666 PF00528 Binding-protein-dependent transport system inner membrane component C7M28_02667 PF04069 Substrate binding domain of ABC-type glycine betaine transport system C7M28_02668 PF01546 Peptidase family M20/M25/M40 C7M28_02668 PF07687 Peptidase dimerisation domain C7M28_02669 PF03606 C4-dicarboxylate anaerobic carrier C7M28_02671 PF00128 Alpha amylase, catalytic domain C7M28_02671 PF16738 Starch-binding module 26 C7M28_02672 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain C7M28_02672 PF00056 lactate/malate dehydrogenase, NAD binding domain C7M28_02673 PF02652 L-lactate permease C7M28_02674 PF07690 Major Facilitator Superfamily C7M28_02675 PF01047 MarR family C7M28_02676 PF01810 LysE type translocator C7M28_02677 PF08892 YqcI/YcgG family C7M28_02678 PF00324 Amino acid permease C7M28_02679 PF09347 Domain of unknown function (DUF1989) C7M28_02680 PF02540 NAD synthase C7M28_02683 PF01202 Shikimate kinase C7M28_02684 PF08241 Methyltransferase domain C7M28_02685 PF03466 LysR substrate binding domain C7M28_02685 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C7M28_02686 PF05448 Acetyl xylan esterase (AXE1) C7M28_02687 PF10127 RNA repair pathway DNA polymerase beta family C7M28_02688 PF01619 Proline dehydrogenase C7M28_02689 PF00171 Aldehyde dehydrogenase family C7M28_02690 PF00474 Sodium:solute symporter family C7M28_02691 PF17853 GGDEF-like domain C7M28_02691 PF13556 PucR C-terminal helix-turn-helix domain C7M28_02692 PF09323 Domain of unknown function (DUF1980) C7M28_02693 PF03773 Predicted permease C7M28_02694 PF00561 alpha/beta hydrolase fold C7M28_02695 PF07992 Pyridine nucleotide-disulphide oxidoreductase C7M28_02696 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases C7M28_02697 PF00355 Rieske [2Fe-2S] domain C7M28_02698 PF07992 Pyridine nucleotide-disulphide oxidoreductase C7M28_02698 PF18267 Rubredoxin NAD+ reductase C-terminal domain C7M28_02698 PF04324 BFD-like [2Fe-2S] binding domain C7M28_02698 PF01077 Nitrite and sulphite reductase 4Fe-4S domain C7M28_02698 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain C7M28_02699 PF01568 Molydopterin dinucleotide binding domain C7M28_02699 PF00384 Molybdopterin oxidoreductase C7M28_02699 PF04879 Molybdopterin oxidoreductase Fe4S4 domain C7M28_02700 PF04324 BFD-like [2Fe-2S] binding domain C7M28_02700 PF07992 Pyridine nucleotide-disulphide oxidoreductase C7M28_02700 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain C7M28_02700 PF18267 Rubredoxin NAD+ reductase C-terminal domain C7M28_02701 PF07690 Major Facilitator Superfamily C7M28_02702 PF02649 Type I GTP cyclohydrolase folE2 C7M28_02703 PF03734 L,D-transpeptidase catalytic domain C7M28_02704 PF02492 CobW/HypB/UreG, nucleotide-binding domain C7M28_02704 PF07683 Cobalamin synthesis protein cobW C-terminal domain C7M28_02705 PF00528 Binding-protein-dependent transport system inner membrane component C7M28_02706 PF00497 Bacterial extracellular solute-binding proteins, family 3 C7M28_02709 PF06271 RDD family C7M28_02710 PF10925 Protein of unknown function (DUF2680) C7M28_02711 PF00232 Glycosyl hydrolase family 1 C7M28_02712 PF11033 Competence protein J (ComJ) C7M28_02713 PF14040 Deoxyribonuclease NucA/NucB C7M28_02714 PF17202 Single cache domain 3 C7M28_02714 PF00672 HAMP domain C7M28_02714 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C7M28_02715 PF01380 SIS domain C7M28_02716 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family C7M28_02717 PF01638 HxlR-like helix-turn-helix C7M28_02718 PF00501 AMP-binding enzyme C7M28_02718 PF13193 AMP-binding enzyme C-terminal domain C7M28_02718 PF00550 Phosphopantetheine attachment site C7M28_02718 PF00668 Condensation domain C7M28_02719 PF00501 AMP-binding enzyme C7M28_02719 PF00550 Phosphopantetheine attachment site C7M28_02719 PF00668 Condensation domain C7M28_02719 PF13193 AMP-binding enzyme C-terminal domain C7M28_02720 PF00668 Condensation domain C7M28_02720 PF00550 Phosphopantetheine attachment site C7M28_02720 PF00975 Thioesterase domain C7M28_02720 PF13193 AMP-binding enzyme C-terminal domain C7M28_02720 PF00501 AMP-binding enzyme C7M28_02721 PF00975 Thioesterase domain C7M28_02722 PF07690 Major Facilitator Superfamily C7M28_02723 PF14317 YcxB-like protein C7M28_02724 PF00892 EamA-like transporter family C7M28_02725 PF00392 Bacterial regulatory proteins, gntR family C7M28_02725 PF00155 Aminotransferase class I and II C7M28_02726 PF01648 4'-phosphopantetheinyl transferase superfamily C7M28_02728 PF00005 ABC transporter C7M28_02729 PF00528 Binding-protein-dependent transport system inner membrane component C7M28_02730 PF00497 Bacterial extracellular solute-binding proteins, family 3 C7M28_02731 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C7M28_02731 PF03466 LysR substrate binding domain C7M28_02732 PF02441 Flavoprotein C7M28_02733 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase C7M28_02736 PF00561 alpha/beta hydrolase fold C7M28_02737 PF00854 POT family C7M28_02738 PF12708 Pectate lyase superfamily protein C7M28_02738 PF13229 Right handed beta helix region C7M28_02740 PF03323 Bacillus/Clostridium GerA spore germination protein C7M28_02741 PF05504 Spore germination B3/ GerAC like, C-terminal C7M28_02742 PF03845 Spore germination protein C7M28_02743 PF00005 ABC transporter C7M28_02744 PF02687 FtsX-like permease family C7M28_02744 PF12704 MacB-like periplasmic core domain C7M28_02745 PF00072 Response regulator receiver domain C7M28_02745 PF00486 Transcriptional regulatory protein, C terminal C7M28_02746 PF00512 His Kinase A (phospho-acceptor) domain C7M28_02746 PF00672 HAMP domain C7M28_02746 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C7M28_02747 PF18801 response regulator aspartate phosphatase H, N terminal C7M28_02748 PF11131 Rap-phr extracellular signalling C7M28_02749 PF09680 Family of unknown function C7M28_02750 PF00696 Amino acid kinase family C7M28_02750 PF13840 ACT domain C7M28_02751 PF01032 FecCD transport family C7M28_02752 PF01032 FecCD transport family C7M28_02753 PF00005 ABC transporter C7M28_02754 PF01497 Periplasmic binding protein C7M28_02755 PF07690 Major Facilitator Superfamily C7M28_02756 PF00440 Bacterial regulatory proteins, tetR family C7M28_02757 PF00881 Nitroreductase family C7M28_02758 PF03992 Antibiotic biosynthesis monooxygenase C7M28_02759 PF01022 Bacterial regulatory protein, arsR family C7M28_02760 PF00392 Bacterial regulatory proteins, gntR family C7M28_02760 PF00155 Aminotransferase class I and II C7M28_02761 PF00202 Aminotransferase class-III C7M28_02762 PF00171 Aldehyde dehydrogenase family C7M28_02763 PF06800 Sugar transport protein C7M28_02765 PF07987 Domain of unkown function (DUF1775) C7M28_02766 PF05425 Copper resistance protein D C7M28_02766 PF13115 YtkA-like C7M28_02766 PF04234 CopC domain C7M28_02767 PF08220 DeoR-like helix-turn-helix domain C7M28_02767 PF05573 NosL C7M28_02769 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit C7M28_02769 PF02378 Phosphotransferase system, EIIC C7M28_02770 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 C7M28_02771 PF08125 Mannitol dehydrogenase C-terminal domain C7M28_02771 PF01232 Mannitol dehydrogenase Rossmann domain C7M28_02772 PF00180 Isocitrate/isopropylmalate dehydrogenase C7M28_02774 PF10502 Signal peptidase, peptidase S26 C7M28_02775 PF01738 Dienelactone hydrolase family C7M28_02776 PF07977 FabA-like domain C7M28_02779 PF03746 LamB/YcsF family C7M28_02780 PF01566 Natural resistance-associated macrophage protein C7M28_02781 PF07286 Protein of unknown function (DUF1445) C7M28_02782 PF02682 Carboxyltransferase domain, subdomain C and D C7M28_02783 PF02626 Carboxyltransferase domain, subdomain A and B C7M28_02784 PF09339 IclR helix-turn-helix domain C7M28_02784 PF01614 Bacterial transcriptional regulator C7M28_02785 PF13472 GDSL-like Lipase/Acylhydrolase family C7M28_02786 PF13129 Protein of unknown function (DUF3953) C7M28_02787 PF03992 Antibiotic biosynthesis monooxygenase C7M28_02788 PF03717 Penicillin-binding Protein dimerisation domain C7M28_02788 PF05223 NTF2-like N-terminal transpeptidase domain C7M28_02788 PF00905 Penicillin binding protein transpeptidase domain C7M28_02789 PF00248 Aldo/keto reductase family C7M28_02790 PF08279 HTH domain C7M28_02790 PF05043 Mga helix-turn-helix domain C7M28_02790 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 C7M28_02790 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit C7M28_02790 PF00874 PRD domain C7M28_02791 PF13193 AMP-binding enzyme C-terminal domain C7M28_02791 PF00501 AMP-binding enzyme C7M28_02792 PF13649 Methyltransferase domain C7M28_02795 PF13302 Acetyltransferase (GNAT) domain C7M28_02796 PF16242 Pyridoxamine 5'-phosphate oxidase like C7M28_02797 PF10997 Alternate to MurJ C7M28_02798 PF12823 Domain of unknown function (DUF3817) C7M28_02799 PF01037 Lrp/AsnC ligand binding domain C7M28_02800 PF01751 Toprim domain C7M28_02800 PF01131 DNA topoisomerase C7M28_02802 PF00990 Diguanylate cyclase, GGDEF domain C7M28_02803 PF10096 Uncharacterized protein conserved in bacteria (DUF2334) C7M28_02805 PF03170 Bacterial cellulose synthase subunit C7M28_02806 PF13520 Amino acid permease C7M28_02807 PF00293 NUDIX domain C7M28_02808 PF00205 Thiamine pyrophosphate enzyme, central domain C7M28_02808 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain C7M28_02808 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain C7M28_02810 PF01566 Natural resistance-associated macrophage protein C7M28_02811 PF04226 Transglycosylase associated protein C7M28_02812 PF09954 Uncharacterized protein conserved in bacteria (DUF2188) C7M28_02813 PF12787 EcsC protein family C7M28_02814 PF10685 Stress-induced bacterial acidophilic repeat motif C7M28_02814 PF00477 Small hydrophilic plant seed protein C7M28_02815 PF07883 Cupin domain C7M28_02816 PF16291 Domain of unknown function (DUF4937 C7M28_02817 PF05067 Manganese containing catalase C7M28_02818 PF03480 Bacterial extracellular solute-binding protein, family 7 C7M28_02819 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C7M28_02819 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain C7M28_02819 PF17203 Single cache domain 3 C7M28_02820 PF08279 HTH domain C7M28_02820 PF00072 Response regulator receiver domain C7M28_02821 PF00375 Sodium:dicarboxylate symporter family C7M28_02822 PF01594 AI-2E family transporter C7M28_02823 PF00005 ABC transporter C7M28_02826 PF08028 Acyl-CoA dehydrogenase, C-terminal domain C7M28_02826 PF02770 Acyl-CoA dehydrogenase, middle domain C7M28_02826 PF02771 Acyl-CoA dehydrogenase, N-terminal domain C7M28_02827 PF13040 Fur-regulated basic protein B C7M28_02829 PF01545 Cation efflux family C7M28_02829 PF16916 Dimerisation domain of Zinc Transporter C7M28_02830 PF00085 Thioredoxin C7M28_02831 PF07478 D-ala D-ala ligase C-terminus C7M28_02831 PF01820 D-ala D-ala ligase N-terminus C7M28_02832 PF08245 Mur ligase middle domain C7M28_02832 PF02875 Mur ligase family, glutamate ligase domain C7M28_02832 PF01225 Mur ligase family, catalytic domain C7M28_02833 PF00270 DEAD/DEAH box helicase C7M28_02833 PF00271 Helicase conserved C-terminal domain C7M28_02834 PF03703 Bacterial PH domain C7M28_02835 PF03703 Bacterial PH domain C7M28_02836 PF01694 Rhomboid family C7M28_02837 PF01648 4'-phosphopantetheinyl transferase superfamily C7M28_02839 PF00842 Alanine racemase, C-terminal domain C7M28_02839 PF01168 Alanine racemase, N-terminal domain C7M28_02840 PF01402 Ribbon-helix-helix protein, copG family C7M28_02841 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system C7M28_02842 PF01740 STAS domain C7M28_02842 PF08678 Rsbr N terminal C7M28_02843 PF01740 STAS domain C7M28_02844 PF13581 Histidine kinase-like ATPase domain C7M28_02845 PF07228 Stage II sporulation protein E (SpoIIE) C7M28_02845 PF08673 Phosphoserine phosphatase RsbU, N-terminal domain C7M28_02846 PF01740 STAS domain C7M28_02847 PF13581 Histidine kinase-like ATPase domain C7M28_02848 PF04542 Sigma-70 region 2 C7M28_02848 PF04539 Sigma-70 region 3 C7M28_02848 PF04545 Sigma-70, region 4 C7M28_02849 PF07228 Stage II sporulation protein E (SpoIIE) C7M28_02853 PF01878 EVE domain C7M28_02854 PF01047 MarR family C7M28_02855 PF00575 S1 RNA binding domain C7M28_02855 PF17674 HHH domain C7M28_02855 PF16921 Tex protein YqgF-like domain C7M28_02855 PF09371 Tex-like protein N-terminal domain C7M28_02856 PF17283 SprT-like zinc ribbon domain C7M28_02856 PF10263 SprT-like family C7M28_02864 PF13302 Acetyltransferase (GNAT) domain C7M28_02866 PF04740 LXG domain of WXG superfamily C7M28_02866 PF14411 A nuclease of the HNH/ENDO VII superfamily with conserved LHH C7M28_02867 PF01381 Helix-turn-helix C7M28_02872 PF01965 DJ-1/PfpI family C7M28_02873 PF00313 'Cold-shock' DNA-binding domain C7M28_02874 PF02559 CarD-like/TRCF domain C7M28_02875 PF00892 EamA-like transporter family C7M28_02876 PF12833 Helix-turn-helix domain C7M28_02876 PF02311 AraC-like ligand binding domain C7M28_02877 PF00892 EamA-like transporter family C7M28_02878 PF12833 Helix-turn-helix domain C7M28_02878 PF06445 GyrI-like small molecule binding domain C7M28_02879 PF00155 Aminotransferase class I and II C7M28_02879 PF00392 Bacterial regulatory proteins, gntR family C7M28_02880 PF07690 Major Facilitator Superfamily C7M28_02882 PF08818 Domain of unknown function (DU1801) C7M28_02885 PF00381 PTS HPr component phosphorylation site C7M28_02886 PF00440 Bacterial regulatory proteins, tetR family C7M28_02887 PF00892 EamA-like transporter family C7M28_02888 PF00155 Aminotransferase class I and II C7M28_02888 PF00392 Bacterial regulatory proteins, gntR family C7M28_02889 PF01575 MaoC like domain C7M28_02890 PF06821 Serine hydrolase C7M28_02891 PF01638 HxlR-like helix-turn-helix C7M28_02892 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) C7M28_02892 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 C7M28_02893 PF01638 HxlR-like helix-turn-helix C7M28_02894 PF02525 Flavodoxin-like fold C7M28_02895 PF07690 Major Facilitator Superfamily C7M28_02896 PF00440 Bacterial regulatory proteins, tetR family C7M28_02896 PF16859 Tetracyclin repressor-like, C-terminal domain C7M28_02897 PF01022 Bacterial regulatory protein, arsR family C7M28_02898 PF02040 Arsenical pump membrane protein C7M28_02899 PF12746 GNAT acetyltransferase C7M28_02900 PF00892 EamA-like transporter family C7M28_02901 PF00392 Bacterial regulatory proteins, gntR family C7M28_02901 PF00155 Aminotransferase class I and II C7M28_02902 PF01613 Flavin reductase like domain C7M28_02904 PF02627 Carboxymuconolactone decarboxylase family C7M28_02906 PF07730 Histidine kinase C7M28_02906 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C7M28_02907 PF00072 Response regulator receiver domain C7M28_02907 PF00196 Bacterial regulatory proteins, luxR family C7M28_02908 PF03176 MMPL family C7M28_02909 PF12697 Alpha/beta hydrolase family C7M28_02910 PF04474 Protein of unknown function (DUF554) C7M28_02911 PF13411 MerR HTH family regulatory protein C7M28_02911 PF06445 GyrI-like small molecule binding domain C7M28_02912 PF01545 Cation efflux family C7M28_02912 PF16916 Dimerisation domain of Zinc Transporter C7M28_02913 PF00881 Nitroreductase family C7M28_02914 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily C7M28_02915 PF07681 DoxX C7M28_02916 PF00085 Thioredoxin C7M28_02917 PF10676 Spore germination protein gerPA/gerPF C7M28_02919 PF10676 Spore germination protein gerPA/gerPF C7M28_02920 PF04239 Protein of unknown function (DUF421) C7M28_02921 PF04239 Protein of unknown function (DUF421) C7M28_02922 PF00011 Hsp20/alpha crystallin family C7M28_02923 PF10676 Spore germination protein gerPA/gerPF C7M28_02924 PF10676 Spore germination protein gerPA/gerPF C7M28_02925 PF00440 Bacterial regulatory proteins, tetR family C7M28_02926 PF13564 DoxX-like family C7M28_02927 PF00583 Acetyltransferase (GNAT) family C7M28_02928 PF01408 Oxidoreductase family, NAD-binding Rossmann fold C7M28_02928 PF02894 Oxidoreductase family, C-terminal alpha/beta domain C7M28_02929 PF00356 Bacterial regulatory proteins, lacI family C7M28_02930 PF00083 Sugar (and other) transporter C7M28_02931 PF01261 Xylose isomerase-like TIM barrel C7M28_02933 PF00324 Amino acid permease C7M28_02934 PF05163 DinB family C7M28_02935 PF01047 MarR family C7M28_02936 PF03176 MMPL family C7M28_02937 PF00881 Nitroreductase family C7M28_02938 PF01047 MarR family C7M28_02939 PF07690 Major Facilitator Superfamily C7M28_02940 PF01925 Sulfite exporter TauE/SafE C7M28_02941 PF00392 Bacterial regulatory proteins, gntR family C7M28_02941 PF07729 FCD domain C7M28_02942 PF00704 Glycosyl hydrolases family 18 C7M28_02942 PF01476 LysM domain C7M28_02943 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase C7M28_02944 PF11611 Domain of unknown function (DUF4352) C7M28_02944 PF08139 Prokaryotic membrane lipoprotein lipid attachment site C7M28_02945 PF00245 Alkaline phosphatase C7M28_02946 PF08818 Domain of unknown function (DU1801) C7M28_02947 PF16302 Domain of unknown function (DUF4944) C7M28_02948 PF00583 Acetyltransferase (GNAT) family C7M28_02949 PF01966 HD domain C7M28_02950 PF07563 Protein of unknown function (DUF1541) C7M28_02951 PF07690 Major Facilitator Superfamily C7M28_02952 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit C7M28_02953 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit C7M28_02954 PF02378 Phosphotransferase system, EIIC C7M28_02955 PF00232 Glycosyl hydrolase family 1 C7M28_02956 PF07702 UTRA domain C7M28_02956 PF00392 Bacterial regulatory proteins, gntR family C7M28_02957 PF00480 ROK family C7M28_02958 PF01238 Phosphomannose isomerase type I C7M28_02959 PF02156 Glycosyl hydrolase family 26 C7M28_02968 PF02769 AIR synthase related protein, C-terminal domain C7M28_02968 PF00586 AIR synthase related protein, N-terminal domain C7M28_02969 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE C7M28_02970 PF00814 Glycoprotease family C7M28_02971 PF00583 Acetyltransferase (GNAT) family C7M28_02972 PF00814 Glycoprotease family C7M28_02973 PF16326 ABC transporter C-terminal domain C7M28_02973 PF00005 ABC transporter C7M28_02973 PF12848 ABC transporter C7M28_02974 PF01967 MoaC family C7M28_02975 PF06971 Putative DNA-binding protein N-terminus C7M28_02975 PF02629 CoA binding domain C7M28_02976 PF02416 mttA/Hcf106 family C7M28_02977 PF00902 Sec-independent protein translocase protein (TatC) C7M28_02978 PF14146 Domain of unknown function (DUF4305) C7M28_02979 PF02517 CPBP intramembrane metalloprotease C7M28_02980 PF00166 Chaperonin 10 Kd subunit C7M28_02981 PF00118 TCP-1/cpn60 chaperonin family C7M28_02984 PF00145 C-5 cytosine-specific DNA methylase C7M28_02985 PF00145 C-5 cytosine-specific DNA methylase C7M28_02987 PF07728 AAA domain (dynein-related subfamily) C7M28_02988 PF09563 LlaJI restriction endonuclease C7M28_02990 PF00931 NB-ARC domain C7M28_02990 PF13176 Tetratricopeptide repeat C7M28_02991 PF00107 Zinc-binding dehydrogenase C7M28_02991 PF08240 Alcohol dehydrogenase GroES-like domain C7M28_02993 PF00294 pfkB family carbohydrate kinase C7M28_02994 PF04012 PspA/IM30 family C7M28_02995 PF08271 TFIIB zinc-binding C7M28_02996 PF04536 TPM domain C7M28_02997 PF13421 SPFH domain-Band 7 family C7M28_02998 PF07885 Ion channel C7M28_02999 PF00083 Sugar (and other) transporter C7M28_03000 PF08240 Alcohol dehydrogenase GroES-like domain C7M28_03000 PF00107 Zinc-binding dehydrogenase C7M28_03001 PF03330 Lytic transglycolase C7M28_03002 PF07676 WD40-like Beta Propeller Repeat C7M28_03004 PF14169 Cold-inducible protein YdjO C7M28_03005 PF12697 Alpha/beta hydrolase family C7M28_03006 PF13170 Protein of unknown function (DUF4003) C7M28_03007 PF07731 Multicopper oxidase C7M28_03007 PF00394 Multicopper oxidase C7M28_03007 PF07732 Multicopper oxidase C7M28_03008 PF00324 Amino acid permease C7M28_03009 PF01545 Cation efflux family C7M28_03009 PF16916 Dimerisation domain of Zinc Transporter C7M28_03010 PF07726 ATPase family associated with various cellular activities (AAA) C7M28_03010 PF17863 AAA lid domain C7M28_03011 PF01882 Protein of unknown function DUF58 C7M28_03012 PF11992 Domain of unknown function (DUF3488) C7M28_03012 PF13559 Domain of unknown function (DUF4129) C7M28_03012 PF01841 Transglutaminase-like superfamily C7M28_03013 PF00117 Glutamine amidotransferase class-I C7M28_03013 PF00958 GMP synthase C terminal domain C7M28_03013 PF02540 NAD synthase C7M28_03014 PF04542 Sigma-70 region 2 C7M28_03014 PF04545 Sigma-70, region 4 C7M28_03016 PF00860 Permease family C7M28_03018 PF13076 Fur-regulated basic protein A C7M28_03019 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) C7M28_03020 PF14044 NETI protein C7M28_03021 PF00731 AIR carboxylase C7M28_03022 PF02222 ATP-grasp domain C7M28_03022 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain C7M28_03023 PF00206 Lyase C7M28_03023 PF10397 Adenylosuccinate lyase C-terminus C7M28_03024 PF01259 SAICAR synthetase C7M28_03025 PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase C7M28_03027 PF00586 AIR synthase related protein, N-terminal domain C7M28_03027 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain C7M28_03027 PF02769 AIR synthase related protein, C-terminal domain C7M28_03028 PF00156 Phosphoribosyl transferase domain C7M28_03029 PF00586 AIR synthase related protein, N-terminal domain C7M28_03029 PF02769 AIR synthase related protein, C-terminal domain C7M28_03030 PF00551 Formyl transferase C7M28_03031 PF01808 AICARFT/IMPCHase bienzyme C7M28_03031 PF02142 MGS-like domain C7M28_03032 PF02844 Phosphoribosylglycinamide synthetase, N domain C7M28_03032 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain C7M28_03032 PF02843 Phosphoribosylglycinamide synthetase, C domain C7M28_03033 PF01037 Lrp/AsnC ligand binding domain C7M28_03034 PF13520 Amino acid permease C7M28_03035 PF11127 Protein of unknown function (DUF2892) C7M28_03036 PF13382 Adenine deaminase C-terminal domain C7M28_03036 PF01979 Amidohydrolase family C7M28_03037 PF17479 Protein of unknown function (DUF3048) C-terminal domain C7M28_03037 PF11258 Protein of unknown function (DUF3048) N-terminal domain C7M28_03038 PF01371 Trp repressor protein C7M28_03039 PF01645 Conserved region in glutamate synthase C7M28_03040 PF01884 PcrB family C7M28_03041 PF00580 UvrD/REP helicase N-terminal domain C7M28_03041 PF13361 UvrD-like helicase C-terminal domain C7M28_03042 PF00533 BRCA1 C Terminus (BRCT) domain C7M28_03042 PF01653 NAD-dependent DNA ligase adenylation domain C7M28_03042 PF03120 NAD-dependent DNA ligase OB-fold domain C7M28_03042 PF03119 NAD-dependent DNA ligase C4 zinc finger domain C7M28_03042 PF12826 Helix-hairpin-helix motif C7M28_03043 PF07537 CamS sex pheromone cAM373 precursor C7M28_03044 PF01636 Phosphotransferase enzyme family C7M28_03045 PF02308 MgtC family C7M28_03046 PF00474 Sodium:solute symporter family C7M28_03047 PF02686 Glu-tRNAGln amidotransferase C subunit C7M28_03048 PF01425 Amidase C7M28_03049 PF02637 GatB domain C7M28_03049 PF02934 GatB/GatE catalytic domain C7M28_03050 PF00440 Bacterial regulatory proteins, tetR family C7M28_03051 PF00873 AcrB/AcrD/AcrF family C7M28_03052 PF00781 Diacylglycerol kinase catalytic domain C7M28_03053 PF01938 TRAM domain C7M28_03053 PF05958 tRNA (Uracil-5-)-methyltransferase C7M28_03058 PF13181 Tetratricopeptide repeat C7M28_03058 PF18801 response regulator aspartate phosphatase H, N terminal C7M28_03061 PF04634 Protein of unknown function, DUF600 C7M28_03062 PF04740 LXG domain of WXG superfamily C7M28_03068 PF13176 Tetratricopeptide repeat C7M28_03068 PF18801 response regulator aspartate phosphatase H, N terminal C7M28_03070 PF01709 Transcriptional regulator C7M28_03072 PF00440 Bacterial regulatory proteins, tetR family C7M28_03073 PF12680 SnoaL-like domain C7M28_03074 PF01370 NAD dependent epimerase/dehydratase family C7M28_03075 PF11007 Spore coat associated protein JA (CotJA) C7M28_03076 PF12652 CotJB protein C7M28_03077 PF05067 Manganese containing catalase C7M28_03078 PF00583 Acetyltransferase (GNAT) family C7M28_03079 PF04854 Protein of unknown function, DUF624 C7M28_03080 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C7M28_03080 PF02743 Cache domain C7M28_03080 PF00672 HAMP domain C7M28_03080 PF06580 Histidine kinase C7M28_03081 PF12833 Helix-turn-helix domain C7M28_03081 PF00072 Response regulator receiver domain C7M28_03082 PF13416 Bacterial extracellular solute-binding protein C7M28_03083 PF00528 Binding-protein-dependent transport system inner membrane component C7M28_03084 PF00528 Binding-protein-dependent transport system inner membrane component C7M28_03085 PF07470 Glycosyl Hydrolase Family 88 C7M28_03086 PF12833 Helix-turn-helix domain C7M28_03087 PF13472 GDSL-like Lipase/Acylhydrolase family C7M28_03088 PF09224 Domain of unknown function (DUF1961) C7M28_03089 PF04854 Protein of unknown function, DUF624 C7M28_03090 PF18370 Rhamnogalacturonan I lyases beta-sheet domain C7M28_03091 PF01839 FG-GAP repeat C7M28_03091 PF18370 Rhamnogalacturonan I lyases beta-sheet domain C7M28_03092 PF00657 GDSL-like Lipase/Acylhydrolase C7M28_03093 PF02449 Beta-galactosidase C7M28_03093 PF08532 Beta-galactosidase trimerisation domain C7M28_03093 PF08533 Beta-galactosidase C-terminal domain C7M28_03095 PF01547 Bacterial extracellular solute-binding protein C7M28_03096 PF00528 Binding-protein-dependent transport system inner membrane component C7M28_03097 PF00528 Binding-protein-dependent transport system inner membrane component C7M28_03098 PF02056 Family 4 glycosyl hydrolase C7M28_03098 PF11975 Family 4 glycosyl hydrolase C-terminal domain C7M28_03099 PF04239 Protein of unknown function (DUF421) C7M28_03100 PF03992 Antibiotic biosynthesis monooxygenase C7M28_03101 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily C7M28_03103 PF01740 STAS domain C7M28_03104 PF10055 Uncharacterized small protein (DUF2292) C7M28_03105 PF01027 Inhibitor of apoptosis-promoting Bax1 C7M28_03106 PF01494 FAD binding domain C7M28_03107 PF13039 Protein of unknown function (DUF3900) C7M28_03107 PF13037 Domain of unknown function (DUF3898) C7M28_03108 PF00258 Flavodoxin C7M28_03108 PF00067 Cytochrome P450 C7M28_03108 PF00175 Oxidoreductase NAD-binding domain C7M28_03108 PF00667 FAD binding domain C7M28_03109 PF00884 Sulfatase C7M28_03110 PF00483 Nucleotidyl transferase C7M28_03111 PF16363 GDP-mannose 4,6 dehydratase C7M28_03112 PF03407 Nucleotide-diphospho-sugar transferase C7M28_03113 PF00535 Glycosyl transferase family 2 C7M28_03114 PF03407 Nucleotide-diphospho-sugar transferase C7M28_03115 PF07690 Major Facilitator Superfamily C7M28_03116 PF13419 Haloacid dehalogenase-like hydrolase C7M28_03117 PF13520 Amino acid permease C7M28_03118 PF00171 Aldehyde dehydrogenase family C7M28_03119 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C7M28_03120 PF00005 ABC transporter C7M28_03120 PF16326 ABC transporter C-terminal domain C7M28_03120 PF12848 ABC transporter C7M28_03121 PF10787 Uncharacterised protein from bacillus cereus group C7M28_03122 PF13411 MerR HTH family regulatory protein C7M28_03123 PF07690 Major Facilitator Superfamily C7M28_03124 PF12848 ABC transporter C7M28_03124 PF00005 ABC transporter C7M28_03125 PF00270 DEAD/DEAH box helicase C7M28_03125 PF00271 Helicase conserved C-terminal domain C7M28_03126 PF00583 Acetyltransferase (GNAT) family C7M28_03127 PF16884 N-terminal domain of oxidoreductase C7M28_03127 PF00107 Zinc-binding dehydrogenase C7M28_03128 PF00005 ABC transporter C7M28_03129 PF01032 FecCD transport family C7M28_03130 PF01032 FecCD transport family C7M28_03131 PF01497 Periplasmic binding protein C7M28_03132 PF11486 Protein of unknown function (DUF3212) C7M28_03133 PF11181 Heat induced stress protein YflT C7M28_03134 PF00544 Pectate lyase C7M28_03135 PF00939 Sodium:sulfate symporter transmembrane region C7M28_03136 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain C7M28_03136 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C7M28_03137 PF12431 Transcriptional regulator C7M28_03137 PF08279 HTH domain C7M28_03137 PF00072 Response regulator receiver domain C7M28_03138 PF03401 Tripartite tricarboxylate transporter family receptor C7M28_03139 PF03600 Citrate transporter C7M28_03140 PF00753 Metallo-beta-lactamase superfamily C7M28_03141 PF02898 Nitric oxide synthase, oxygenase domain C7M28_03142 PF00708 Acylphosphatase C7M28_03143 PF03475 3-alpha domain C7M28_03143 PF03473 MOSC domain C7M28_03144 PF11121 Protein of unknown function (DUF2639) C7M28_03146 PF11588 Protein of unknown function (DUF3243) C7M28_03147 PF00557 Metallopeptidase family M24 C7M28_03148 PF02378 Phosphotransferase system, EIIC C7M28_03148 PF00367 phosphotransferase system, EIIB C7M28_03149 PF00884 Sulfatase C7M28_03150 PF09350 Domain of unknown function (DUF1992) C7M28_03151 PF01235 Sodium:alanine symporter family C7M28_03152 PF03323 Bacillus/Clostridium GerA spore germination protein C7M28_03153 PF02378 Phosphotransferase system, EIIC C7M28_03153 PF00367 phosphotransferase system, EIIB C7M28_03154 PF00128 Alpha amylase, catalytic domain C7M28_03154 PF16657 Maltogenic Amylase, C-terminal domain C7M28_03155 PF00392 Bacterial regulatory proteins, gntR family C7M28_03155 PF07702 UTRA domain C7M28_03156 PF00881 Nitroreductase family C7M28_03157 PF02872 5'-nucleotidase, C-terminal domain C7M28_03157 PF00149 Calcineurin-like phosphoesterase C7M28_03158 PF01965 DJ-1/PfpI family C7M28_03159 PF07690 Major Facilitator Superfamily C7M28_03160 PF06569 Protein of unknown function (DUF1128) C7M28_03161 PF01451 Low molecular weight phosphotyrosine protein phosphatase C7M28_03163 PF03631 Virulence factor BrkB C7M28_03165 PF07690 Major Facilitator Superfamily C7M28_03166 PF01699 Sodium/calcium exchanger protein C7M28_03167 PF14167 YfkD-like protein C7M28_03168 PF00924 Mechanosensitive ion channel C7M28_03169 PF04055 Radical SAM superfamily C7M28_03169 PF08756 YfkB-like domain C7M28_03171 PF01522 Polysaccharide deacetylase C7M28_03172 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase C7M28_03172 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase C7M28_03173 PF01544 CorA-like Mg2+ transporter protein C7M28_03174 PF00730 HhH-GPD superfamily base excision DNA repair protein C7M28_03175 PF01938 TRAM domain C7M28_03175 PF05958 tRNA (Uracil-5-)-methyltransferase C7M28_03176 PF14118 YfzA-like protein C7M28_03177 PF01207 Dihydrouridine synthase (Dus) C7M28_03179 PF00676 Dehydrogenase E1 component C7M28_03180 PF02780 Transketolase, C-terminal domain C7M28_03180 PF02779 Transketolase, pyrimidine binding domain C7M28_03181 PF02817 e3 binding domain C7M28_03181 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) C7M28_03181 PF00364 Biotin-requiring enzyme C7M28_03182 PF07992 Pyridine nucleotide-disulphide oxidoreductase C7M28_03182 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain C7M28_03183 PF02954 Bacterial regulatory protein, Fis family C7M28_03183 PF01590 GAF domain C7M28_03183 PF00158 Sigma-54 interaction domain C7M28_03184 PF08141 Small acid-soluble spore protein H family C7M28_03185 PF02694 Uncharacterised BCR, YnfA/UPF0060 family C7M28_03186 PF17353 Family of unknown function (DUF5381) C7M28_03187 PF17353 Family of unknown function (DUF5381) C7M28_03190 PF06013 Proteins of 100 residues with WXG C7M28_03191 PF02056 Family 4 glycosyl hydrolase C7M28_03191 PF11975 Family 4 glycosyl hydrolase C-terminal domain C7M28_03192 PF01418 Helix-turn-helix domain, rpiR family C7M28_03192 PF01380 SIS domain C7M28_03193 PF00367 phosphotransferase system, EIIB C7M28_03193 PF02378 Phosphotransferase system, EIIC C7M28_03194 PF00664 ABC transporter transmembrane region C7M28_03194 PF00005 ABC transporter C7M28_03195 PF00005 ABC transporter C7M28_03195 PF00664 ABC transporter transmembrane region C7M28_03196 PF07681 DoxX C7M28_03197 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily C7M28_03198 PF12833 Helix-turn-helix domain C7M28_03198 PF02311 AraC-like ligand binding domain C7M28_03199 PF00083 Sugar (and other) transporter C7M28_03200 PF01261 Xylose isomerase-like TIM barrel C7M28_03201 PF02894 Oxidoreductase family, C-terminal alpha/beta domain C7M28_03201 PF01408 Oxidoreductase family, NAD-binding Rossmann fold C7M28_03203 PF07730 Histidine kinase C7M28_03204 PF00196 Bacterial regulatory proteins, luxR family C7M28_03204 PF00072 Response regulator receiver domain C7M28_03205 PF00005 ABC transporter C7M28_03208 PF10400 Virulence activator alpha C-term C7M28_03208 PF03551 Transcriptional regulator PadR-like family C7M28_03209 PF01674 Lipase (class 2) C7M28_03210 PF01757 Acyltransferase family C7M28_03211 PF00440 Bacterial regulatory proteins, tetR family C7M28_03211 PF17922 Tetracyclin repressor-like, C-terminal domain C7M28_03212 PF07690 Major Facilitator Superfamily C7M28_03213 PF12867 DinB superfamily C7M28_03214 PF07690 Major Facilitator Superfamily C7M28_03215 PF01047 MarR family C7M28_03216 PF03706 Lysylphosphatidylglycerol synthase TM region C7M28_03216 PF09924 Uncharacterised conserved protein (DUF2156) C7M28_03217 PF01497 Periplasmic binding protein C7M28_03218 PF01032 FecCD transport family C7M28_03219 PF01032 FecCD transport family C7M28_03220 PF02567 Phenazine biosynthesis-like protein C7M28_03221 PF00881 Nitroreductase family C7M28_03222 PF14151 YfhD-like protein C7M28_03223 PF14152 YfhE-like protein C7M28_03224 PF08338 Domain of unknown function (DUF1731) C7M28_03224 PF01370 NAD dependent epimerase/dehydratase family C7M28_03225 PF02631 RecX family C7M28_03226 PF08838 Protein of unknown function (DUF1811) C7M28_03228 PF07690 Major Facilitator Superfamily C7M28_03229 PF08176 Small acid-soluble spore protein K family C7M28_03230 PF14043 WVELL protein C7M28_03231 PF08239 Bacterial SH3 domain C7M28_03232 PF13630 SdpI/YhfL protein family C7M28_03233 PF00561 alpha/beta hydrolase fold C7M28_03234 PF00535 Glycosyl transferase family 2 C7M28_03235 PF09586 Bacterial membrane protein YfhO C7M28_03236 PF04307 LexA-binding, inner membrane-associated putative hydrolase C7M28_03237 PF00730 HhH-GPD superfamily base excision DNA repair protein C7M28_03237 PF14815 NUDIX domain C7M28_03240 PF04259 Small, acid-soluble spore protein, gamma-type C7M28_03241 PF14182 YgaB-like protein C7M28_03242 PF04167 Protein of unknown function (DUF402) C7M28_03243 PF00664 ABC transporter transmembrane region C7M28_03243 PF00005 ABC transporter C7M28_03244 PF06081 Aromatic acid exporter family member 1 C7M28_03245 PF00202 Aminotransferase class-III C7M28_03246 PF00578 AhpC/TSA family C7M28_03247 PF01475 Ferric uptake regulator family C7M28_03248 PF11023 Zinc-ribbon containing domain C7M28_03249 PF14540 Nucleotidyltransferase-like C7M28_03249 PF18576 Helix-turn-helix domain C7M28_03269 PF07070 SpoOM protein C7M28_03271 PF03575 Peptidase family S51 C7M28_03272 PF13667 ThiC-associated domain C7M28_03272 PF01964 Radical SAM ThiC family C7M28_03273 PF01565 FAD binding domain C7M28_03273 PF08031 Berberine and berberine like C7M28_03274 PF13040 Fur-regulated basic protein B C7M28_03275 PF06628 Catalase-related immune-responsive C7M28_03275 PF00199 Catalase C7M28_03276 PF00005 ABC transporter C7M28_03277 PF09084 NMT1/THI5 like C7M28_03278 PF00528 Binding-protein-dependent transport system inner membrane component C7M28_03279 PF00296 Luciferase-like monooxygenase C7M28_03281 PF00253 Ribosomal protein S14p/S29e C7M28_03283 PF01381 Helix-turn-helix C7M28_03286 PF08331 Domain of unknown function (DUF1730) C7M28_03287 PF12671 Putative amidase domain C7M28_03288 PF00588 SpoU rRNA Methylase family C7M28_03289 PF13171 Protein of unknown function (DUF4004) C7M28_03290 PF04519 Polymer-forming cytoskeletal C7M28_03292 PF08298 PrkA AAA domain C7M28_03292 PF06798 PrkA serine protein kinase C-terminal domain C7M28_03293 PF04285 Protein of unknown function (DUF444) C7M28_03294 PF01047 MarR family C7M28_03296 PF07690 Major Facilitator Superfamily C7M28_03297 PF03358 NADPH-dependent FMN reductase C7M28_03300 PF00392 Bacterial regulatory proteins, gntR family C7M28_03301 PF00005 ABC transporter C7M28_03302 PF00005 ABC transporter C7M28_03303 PF12679 ABC-2 family transporter protein C7M28_03304 PF00313 'Cold-shock' DNA-binding domain C7M28_03305 PF03180 NLPA lipoprotein C7M28_03306 PF07694 5TMR of 5TMR-LYT C7M28_03306 PF00990 Diguanylate cyclase, GGDEF domain C7M28_03307 PF00375 Sodium:dicarboxylate symporter family C7M28_03311 PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) C7M28_03313 PF07875 Coat F domain C7M28_03314 PF00746 LPXTG cell wall anchor motif C7M28_03314 PF02872 5'-nucleotidase, C-terminal domain C7M28_03314 PF00565 Staphylococcal nuclease homologue C7M28_03314 PF00149 Calcineurin-like phosphoesterase C7M28_03315 PF04203 Sortase domain C7M28_03316 PF00849 RNA pseudouridylate synthase C7M28_03316 PF01479 S4 domain C7M28_03317 PF17326 Family of unknown function (DUF5365) C7M28_03318 PF00571 CBS domain C7M28_03319 PF13419 Haloacid dehalogenase-like hydrolase C7M28_03320 PF00583 Acetyltransferase (GNAT) family C7M28_03320 PF00795 Carbon-nitrogen hydrolase C7M28_03321 PF00202 Aminotransferase class-III C7M28_03322 PF04309 Glycerol-3-phosphate responsive antiterminator C7M28_03323 PF00230 Major intrinsic protein C7M28_03324 PF00370 FGGY family of carbohydrate kinases, N-terminal domain C7M28_03324 PF02782 FGGY family of carbohydrate kinases, C-terminal domain C7M28_03325 PF01266 FAD dependent oxidoreductase C7M28_03325 PF16901 C-terminal domain of alpha-glycerophosphate oxidase C7M28_03326 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III C7M28_03326 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II C7M28_03326 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I C7M28_03326 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain C7M28_03327 PF07730 Histidine kinase C7M28_03327 PF13185 GAF domain C7M28_03328 PF00196 Bacterial regulatory proteins, luxR family C7M28_03328 PF00072 Response regulator receiver domain C7M28_03329 PF03358 NADPH-dependent FMN reductase C7M28_03330 PF14148 YhdB-like protein C7M28_03331 PF13028 Protein of unknown function (DUF3889) C7M28_03332 PF00877 NlpC/P60 family C7M28_03332 PF01476 LysM domain C7M28_03333 PF02082 Transcriptional regulator C7M28_03334 PF05552 Conserved TM helix C7M28_03335 PF04293 SpoVR like protein C7M28_03336 PF00245 Alkaline phosphatase C7M28_03337 PF01476 LysM domain C7M28_03337 PF00877 NlpC/P60 family C7M28_03338 PF03466 LysR substrate binding domain C7M28_03338 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C7M28_03339 PF00285 Citrate synthase, C-terminal domain C7M28_03341 PF13520 Amino acid permease C7M28_03342 PF00209 Sodium:neurotransmitter symporter family C7M28_03343 PF00155 Aminotransferase class I and II C7M28_03343 PF00392 Bacterial regulatory proteins, gntR family C7M28_03344 PF00583 Acetyltransferase (GNAT) family C7M28_03345 PF17453 Sigma-M inhibitor C7M28_03346 PF13800 Sigma factor regulator N-terminal C7M28_03346 PF13791 Sigma factor regulator C-terminal C7M28_03347 PF04542 Sigma-70 region 2 C7M28_03347 PF08281 Sigma-70, region 4 C7M28_03348 PF00248 Aldo/keto reductase family C7M28_03349 PF01553 Acyltransferase C7M28_03350 PF00571 CBS domain C7M28_03350 PF03471 Transporter associated domain C7M28_03350 PF01595 Cyclin M transmembrane N-terminal domain C7M28_03351 PF13411 MerR HTH family regulatory protein C7M28_03352 PF00155 Aminotransferase class I and II C7M28_03353 PF03471 Transporter associated domain C7M28_03353 PF00571 CBS domain C7M28_03353 PF01595 Cyclin M transmembrane N-terminal domain C7M28_03354 PF02537 CrcB-like protein, Camphor Resistance (CrcB) C7M28_03355 PF02537 CrcB-like protein, Camphor Resistance (CrcB) C7M28_03356 PF03009 Glycerophosphoryl diester phosphodiesterase family C7M28_03357 PF17444 Uncharacterized YhdX-like C7M28_03358 PF00924 Mechanosensitive ion channel C7M28_03359 PF02146 Sir2 family C7M28_03360 PF01522 Polysaccharide deacetylase C7M28_03361 PF01063 Amino-transferase class IV C7M28_03362 PF03553 Na+/H+ antiporter family C7M28_03363 PF00582 Universal stress protein family C7M28_03364 PF00005 ABC transporter C7M28_03364 PF00664 ABC transporter transmembrane region C7M28_03365 PF00664 ABC transporter transmembrane region C7M28_03365 PF00005 ABC transporter C7M28_03366 PF13460 NAD(P)H-binding C7M28_03367 PF00269 Small, acid-soluble spore proteins, alpha/beta type C7M28_03368 PF17277 Family of unknown function (DUF5342) C7M28_03369 PF14398 YheC/D like ATP-grasp C7M28_03370 PF14398 YheC/D like ATP-grasp C7M28_03371 PF04286 Protein of unknown function (DUF445) C7M28_03372 PF06133 Control of competence regulator ComK, YlbF/YmcA C7M28_03373 PF08713 DNA alkylation repair enzyme C7M28_03375 PF04055 Radical SAM superfamily C7M28_03376 PF00999 Sodium/hydrogen exchanger family C7M28_03377 PF02080 TrkA-C domain C7M28_03379 PF00378 Enoyl-CoA hydratase/isomerase C7M28_03380 PF14120 YhzD-like protein C7M28_03381 PF13732 Domain of unknown function (DUF4162) C7M28_03381 PF00005 ABC transporter C7M28_03383 PF00149 Calcineurin-like phosphoesterase C7M28_03384 PF13514 AAA domain C7M28_03385 PF01966 HD domain C7M28_03386 PF14147 Sporulation protein YhaL C7M28_03388 PF11667 Putative zincin peptidase C7M28_03389 PF08963 Protein of unknown function (DUF1878) C7M28_03390 PF01047 MarR family C7M28_03391 PF12732 YtxH-like protein C7M28_03392 PF17099 Tryptophan transporter TrpP C7M28_03393 PF00266 Aminotransferase class-V C7M28_03394 PF01230 HIT domain C7M28_03395 PF00005 ABC transporter C7M28_03396 PF05975 Bacterial ABC transporter protein EcsB C7M28_03397 PF12787 EcsC protein family C7M28_03398 PF07687 Peptidase dimerisation domain C7M28_03398 PF01546 Peptidase family M20/M25/M40 C7M28_03401 PF03992 Antibiotic biosynthesis monooxygenase C7M28_03402 PF00912 Transglycosylase C7M28_03402 PF00905 Penicillin binding protein transpeptidase domain C7M28_03403 PF01208 Uroporphyrinogen decarboxylase (URO-D) C7M28_03406 PF17932 Tetracyclin repressor-like, C-terminal domain C7M28_03406 PF00440 Bacterial regulatory proteins, tetR family C7M28_03408 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal C7M28_03408 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C7M28_03409 PF10086 YhfC intramembrane metalloprotease C7M28_03410 PF05343 M42 glutamyl aminopeptidase C7M28_03411 PF04266 ASCH domain C7M28_03412 PF00375 Sodium:dicarboxylate symporter family C7M28_03413 PF12706 Beta-lactamase superfamily domain C7M28_03414 PF10437 Bacterial lipoate protein ligase C-terminus C7M28_03414 PF03099 Biotin/lipoate A/B protein ligase family C7M28_03415 PF13460 NAD(P)H-binding C7M28_03416 PF00501 AMP-binding enzyme C7M28_03416 PF13193 AMP-binding enzyme C-terminal domain C7M28_03418 PF01435 Peptidase family M48 C7M28_03418 PF16491 CAAX prenyl protease N-terminal, five membrane helices C7M28_03419 PF00082 Subtilase family C7M28_03419 PF05922 Peptidase inhibitor I9 C7M28_03420 PF00583 Acetyltransferase (GNAT) family C7M28_03421 PF00107 Zinc-binding dehydrogenase C7M28_03421 PF08240 Alcohol dehydrogenase GroES-like domain C7M28_03422 PF01497 Periplasmic binding protein C7M28_03423 PF00300 Histidine phosphatase superfamily (branch 1) C7M28_03424 PF00108 Thiolase, N-terminal domain C7M28_03424 PF02803 Thiolase, C-terminal domain C7M28_03425 PF13193 AMP-binding enzyme C-terminal domain C7M28_03425 PF00501 AMP-binding enzyme C7M28_03426 PF02632 BioY family C7M28_03427 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C7M28_03428 PF01266 FAD dependent oxidoreductase C7M28_03428 PF00355 Rieske [2Fe-2S] domain C7M28_03430 PF08858 IDEAL domain C7M28_03431 PF06338 ComK protein C7M28_03433 PF05901 Excalibur calcium-binding domain C7M28_03434 PF00474 Sodium:solute symporter family C7M28_03435 PF11755 Protein of unknown function (DUF3311) C7M28_03437 PF09335 SNARE associated Golgi protein C7M28_03438 PF10502 Signal peptidase, peptidase S26 C7M28_03439 PF01494 FAD binding domain C7M28_03440 PF01047 MarR family C7M28_03441 PF07690 Major Facilitator Superfamily C7M28_03442 PF01408 Oxidoreductase family, NAD-binding Rossmann fold C7M28_03442 PF02894 Oxidoreductase family, C-terminal alpha/beta domain C7M28_03443 PF05116 Sucrose-6F-phosphate phosphohydrolase C7M28_03444 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family C7M28_03445 PF00356 Bacterial regulatory proteins, lacI family C7M28_03446 PF05145 Transition state regulatory protein AbrB C7M28_03447 PF07690 Major Facilitator Superfamily C7M28_03448 PF12793 Sugar transport-related sRNA regulator N-term C7M28_03448 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle C7M28_03449 PF03860 Domain of Unknown Function (DUF326) C7M28_03450 PF02915 Rubrerythrin C7M28_03451 PF12705 PD-(D/E)XK nuclease superfamily C7M28_03451 PF13361 UvrD-like helicase C-terminal domain C7M28_03452 PF00580 UvrD/REP helicase N-terminal domain C7M28_03452 PF12705 PD-(D/E)XK nuclease superfamily C7M28_03452 PF13361 UvrD-like helicase C-terminal domain C7M28_03453 PF12320 Type 5 capsule protein repressor C-terminal domain C7M28_03453 PF00149 Calcineurin-like phosphoesterase C7M28_03454 PF13476 AAA domain C7M28_03456 PF10676 Spore germination protein gerPA/gerPF C7M28_03457 PF10970 Spore germination protein GerPE C7M28_03459 PF10737 Spore germination protein GerPC C7M28_03460 PF10803 Spore germination GerPB C7M28_03461 PF10676 Spore germination protein gerPA/gerPF C7M28_03462 PF09388 Spo0E like sporulation regulatory protein C7M28_03463 PF08757 CotH kinase protein C7M28_03464 PF01557 Fumarylacetoacetate (FAA) hydrolase family C7M28_03465 PF07457 Protein of unknown function (DUF1516) C7M28_03466 PF17936 Bacterial Ig domain C7M28_03466 PF00082 Subtilase family C7M28_03467 PF10949 Protein of unknown function (DUF2777) C7M28_03468 PF00733 Asparagine synthase C7M28_03468 PF13537 Glutamine amidotransferase domain C7M28_03469 PF05163 DinB family C7M28_03471 PF01554 MatE C7M28_03472 PF12833 Helix-turn-helix domain C7M28_03472 PF02311 AraC-like ligand binding domain C7M28_03473 PF00356 Bacterial regulatory proteins, lacI family C7M28_03474 PF02894 Oxidoreductase family, C-terminal alpha/beta domain C7M28_03474 PF01408 Oxidoreductase family, NAD-binding Rossmann fold C7M28_03475 PF05163 DinB family C7M28_03476 PF01810 LysE type translocator C7M28_03477 PF00392 Bacterial regulatory proteins, gntR family C7M28_03477 PF00155 Aminotransferase class I and II C7M28_03478 PF13599 Pentapeptide repeats (9 copies) C7M28_03479 PF08386 TAP-like protein C7M28_03479 PF00561 alpha/beta hydrolase fold C7M28_03481 PF14306 PUA-like domain C7M28_03481 PF01747 ATP-sulfurylase C7M28_03482 PF01507 Phosphoadenosine phosphosulfate reductase family C7M28_03483 PF04029 2-phosphosulpholactate phosphatase C7M28_03484 PF02679 (2R)-phospho-3-sulfolactate synthase (ComA) C7M28_03485 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 C7M28_03486 PF13378 Enolase C-terminal domain-like C7M28_03486 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain C7M28_03487 PF07690 Major Facilitator Superfamily C7M28_03488 PF13673 Acetyltransferase (GNAT) domain C7M28_03488 PF18014 Acetyltransferase (GNAT) domain C7M28_03489 PF13673 Acetyltransferase (GNAT) domain C7M28_03490 PF02219 Methylenetetrahydrofolate reductase C7M28_03490 PF02574 Homocysteine S-methyltransferase C7M28_03491 PF04461 Protein of unknown function (DUF520) C7M28_03492 PF17783 CvfB-like winged helix domain C7M28_03492 PF13509 S1 domain C7M28_03495 PF17418 Sporulation delaying protein SdpA C7M28_03496 PF03551 Transcriptional regulator PadR-like family C7M28_03498 PF12650 Domain of unknown function (DUF3784) C7M28_03499 PF02868 Thermolysin metallopeptidase, alpha-helical domain C7M28_03499 PF01447 Thermolysin metallopeptidase, catalytic domain C7M28_03499 PF07504 Fungalysin/Thermolysin Propeptide Motif C7M28_03499 PF03413 Peptidase propeptide and YPEB domain C7M28_03500 PF02645 Uncharacterised protein, DegV family COG1307 C7M28_03501 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 C7M28_03501 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) C7M28_03502 PF12690 Intracellular proteinase inhibitor C7M28_03503 PF12758 Protein of unknown function (DUF3813) C7M28_03505 PF00326 Prolyl oligopeptidase family C7M28_03506 PF01883 Iron-sulfur cluster assembly protein C7M28_03508 PF01565 FAD binding domain C7M28_03509 PF07690 Major Facilitator Superfamily C7M28_03510 PF02774 Semialdehyde dehydrogenase, dimerisation domain C7M28_03510 PF01118 Semialdehyde dehydrogenase, NAD binding domain C7M28_03511 PF01960 ArgJ family C7M28_03512 PF00696 Amino acid kinase family C7M28_03513 PF00202 Aminotransferase class-III C7M28_03514 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain C7M28_03514 PF00117 Glutamine amidotransferase class-I C7M28_03515 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain C7M28_03515 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain C7M28_03516 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain C7M28_03516 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain C7M28_03517 PF14168 YjzC-like protein C7M28_03518 PF11151 Protein of unknown function (DUF2929) C7M28_03521 PF02608 ABC transporter substrate-binding protein PnrA-like C7M28_03522 PF10815 ComZ C7M28_03524 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal C7M28_03524 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C7M28_03525 PF02801 Beta-ketoacyl synthase, C-terminal domain C7M28_03525 PF00109 Beta-ketoacyl synthase, N-terminal domain C7M28_03526 PF10026 Predicted Zn-dependent protease (DUF2268) C7M28_03527 PF00005 ABC transporter C7M28_03527 PF08352 Oligopeptide/dipeptide transporter, C-terminal region C7M28_03528 PF08352 Oligopeptide/dipeptide transporter, C-terminal region C7M28_03528 PF00005 ABC transporter C7M28_03529 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle C7M28_03530 PF00528 Binding-protein-dependent transport system inner membrane component C7M28_03531 PF12911 N-terminal TM domain of oligopeptide transport permease C C7M28_03531 PF00528 Binding-protein-dependent transport system inner membrane component C7M28_03532 PF12227 Protein of unknown function (DUF3603) C7M28_03533 PF00579 tRNA synthetases class I (W and Y) C7M28_03534 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle C7M28_03535 PF00528 Binding-protein-dependent transport system inner membrane component C7M28_03536 PF00528 Binding-protein-dependent transport system inner membrane component C7M28_03536 PF12911 N-terminal TM domain of oligopeptide transport permease C C7M28_03537 PF08352 Oligopeptide/dipeptide transporter, C-terminal region C7M28_03537 PF00005 ABC transporter C7M28_03538 PF00005 ABC transporter C7M28_03538 PF08352 Oligopeptide/dipeptide transporter, C-terminal region C7M28_03539 PF07690 Major Facilitator Superfamily C7M28_03540 PF13508 Acetyltransferase (GNAT) domain C7M28_03541 PF03960 ArsC family C7M28_03542 PF03741 Integral membrane protein TerC family C7M28_03543 PF05389 Negative regulator of genetic competence (MecA) C7M28_03544 PF06054 Competence protein CoiA-like family C7M28_03545 PF08439 Oligopeptidase F C7M28_03545 PF01432 Peptidase family M3 C7M28_03549 PF01152 Bacterial-like globin C7M28_03550 PF01464 Transglycosylase SLT domain C7M28_03551 PF01928 CYTH domain C7M28_03553 PF04607 Region found in RelA / SpoT proteins C7M28_03554 PF01513 ATP-NAD kinase C7M28_03555 PF00849 RNA pseudouridylate synthase C7M28_03556 PF00149 Calcineurin-like phosphoesterase C7M28_03557 PF02080 TrkA-C domain C7M28_03557 PF00999 Sodium/hydrogen exchanger family C7M28_03557 PF02254 TrkA-N domain C7M28_03558 PF03070 TENA/THI-4/PQQC family C7M28_03559 PF02581 Thiamine monophosphate synthase C7M28_03560 PF01266 FAD dependent oxidoreductase C7M28_03561 PF02597 ThiS family C7M28_03562 PF05690 Thiazole biosynthesis protein ThiG C7M28_03563 PF00899 ThiF family C7M28_03564 PF08543 Phosphomethylpyrimidine kinase C7M28_03566 PF14153 Spore coat protein CotO C7M28_03567 PF10612 Spore coat protein Z C7M28_03568 PF10612 Spore coat protein Z C7M28_03569 PF07552 Spore Coat Protein X and V domain C7M28_03571 PF07552 Spore Coat Protein X and V domain C7M28_03572 PF07098 Protein of unknown function (DUF1360) C7M28_03575 PF14069 Stage VI sporulation protein F C7M28_03576 PF13361 UvrD-like helicase C-terminal domain C7M28_03576 PF00580 UvrD/REP helicase N-terminal domain C7M28_03578 PF13673 Acetyltransferase (GNAT) domain C7M28_03580 PF00756 Putative esterase C7M28_03581 PF01053 Cys/Met metabolism PLP-dependent enzyme C7M28_03582 PF01053 Cys/Met metabolism PLP-dependent enzyme C7M28_03583 PF13302 Acetyltransferase (GNAT) domain C7M28_03584 PF05684 Protein of unknown function (DUF819) C7M28_03587 PF12671 Putative amidase domain C7M28_03593 PF09639 YjcQ protein C7M28_03594 PF10668 Phage terminase small subunit C7M28_03595 PF03992 Antibiotic biosynthesis monooxygenase C7M28_03597 PF02368 Bacterial Ig-like domain (group 2) C7M28_03598 PF05043 Mga helix-turn-helix domain C7M28_03598 PF08279 HTH domain C7M28_03598 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 C7M28_03598 PF00874 PRD domain C7M28_03599 PF02378 Phosphotransferase system, EIIC C7M28_03599 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 C7M28_03599 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit C7M28_03600 PF01238 Phosphomannose isomerase type I C7M28_03601 PF11208 Protein of unknown function (DUF2992) C7M28_03602 PF13302 Acetyltransferase (GNAT) domain C7M28_03604 PF04073 Aminoacyl-tRNA editing domain C7M28_03605 PF13783 Domain of unknown function (DUF4177) C7M28_03606 PF14154 Domain of unknown function (DUF4306) C7M28_03607 PF01040 UbiA prenyltransferase family C7M28_03609 PF01522 Polysaccharide deacetylase C7M28_03609 PF13739 Deacetylase PdaC C7M28_03609 PF11738 Protein of unknown function (DUF3298) C7M28_03610 PF10901 Protein of unknown function (DUF2690) C7M28_03611 PF14070 Putative motility protein C7M28_03612 PF10026 Predicted Zn-dependent protease (DUF2268) C7M28_03613 PF10990 Protein of unknown function (DUF2809) C7M28_03614 PF14172 Domain of unknown function (DUF4309) C7M28_03615 PF12838 4Fe-4S dicluster domain C7M28_03615 PF04879 Molybdopterin oxidoreductase Fe4S4 domain C7M28_03615 PF00384 Molybdopterin oxidoreductase C7M28_03615 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region C7M28_03615 PF01568 Molydopterin dinucleotide binding domain C7M28_03616 PF07849 Protein of unknown function (DUF1641) C7M28_03617 PF11611 Domain of unknown function (DUF4352) C7M28_03618 PF00293 NUDIX domain C7M28_03620 PF00067 Cytochrome P450 C7M28_03621 PF04101 Glycosyltransferase family 28 C-terminal domain C7M28_03623 PF02602 Uroporphyrinogen-III synthase HemD C7M28_03624 PF03649 Uncharacterised protein family (UPF0014) C7M28_03625 PF00005 ABC transporter C7M28_03626 PF13536 Putative multidrug resistance efflux transporter C7M28_03628 PF07849 Protein of unknown function (DUF1641) C7M28_03629 PF07992 Pyridine nucleotide-disulphide oxidoreductase C7M28_03630 PF02614 Glucuronate isomerase C7M28_03632 PF02615 Malate/L-lactate dehydrogenase C7M28_03633 PF08240 Alcohol dehydrogenase GroES-like domain C7M28_03633 PF00107 Zinc-binding dehydrogenase C7M28_03634 PF03786 D-mannonate dehydratase (UxuA) C7M28_03635 PF00106 short chain dehydrogenase C7M28_03636 PF07690 Major Facilitator Superfamily C7M28_03637 PF00356 Bacterial regulatory proteins, lacI family C7M28_03638 PF08125 Mannitol dehydrogenase C-terminal domain C7M28_03638 PF01232 Mannitol dehydrogenase Rossmann domain C7M28_03639 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus C7M28_03639 PF08666 SAF domain C7M28_03640 PF01925 Sulfite exporter TauE/SafE C7M28_03641 PF05163 DinB family C7M28_03642 PF00004 ATPase family associated with various cellular activities (AAA) C7M28_03643 PF18801 response regulator aspartate phosphatase H, N terminal C7M28_03645 PF03795 YCII-related domain C7M28_03646 PF01471 Putative peptidoglycan binding domain C7M28_03646 PF01510 N-acetylmuramoyl-L-alanine amidase C7M28_03646 PF01476 LysM domain C7M28_03647 PF08000 Bacterial PH domain C7M28_03648 PF05908 Poly-gamma-glutamate hydrolase C7M28_03649 PF05067 Manganese containing catalase C7M28_03650 PF06114 IrrE N-terminal-like domain C7M28_03651 PF01381 Helix-turn-helix C7M28_03654 PF01695 IstB-like ATP binding protein C7M28_03657 PF17356 Phage-like element PBSX protein XtrA C7M28_03658 PF08281 Sigma-70, region 4 C7M28_03659 PF10668 Phage terminase small subunit C7M28_03659 PF03592 Terminase small subunit C7M28_03660 PF17288 Terminase RNAseH like domain C7M28_03660 PF04466 Phage terminase large subunit C7M28_03661 PF04860 Phage portal protein C7M28_03662 PF14550 Putative phage serine protease XkdF C7M28_03663 PF05065 Phage capsid family C7M28_03664 PF11436 Protein of unknown function (DUF3199) C7M28_03665 PF12206 Domain of unknown function (DUF3599) C7M28_03666 PF04883 Bacteriophage HK97-gp10, putative tail-component C7M28_03668 PF04984 Phage tail sheath protein subtilisin-like domain C7M28_03668 PF17482 Phage tail sheath C-terminal domain C7M28_03668 PF17481 Phage tail sheath protein beta-sandwich domain C7M28_03669 PF09393 Phage tail tube protein C7M28_03670 PF08890 Phage XkdN-like tail assembly chaperone protein, TAC C7M28_03671 PF01464 Transglycosylase SLT domain C7M28_03672 PF01476 LysM domain C7M28_03674 PF10844 Protein of unknown function (DUF2577) C7M28_03675 PF10934 Protein of unknown function (DUF2634) C7M28_03676 PF04865 Baseplate J-like protein C7M28_03677 PF10076 Uncharacterised protein conserved in bacteria (DUF2313) C7M28_03680 PF09636 XkdW protein C7M28_03681 PF09693 Phage uncharacterised protein (Phage_XkdX) C7M28_03683 PF10779 Haemolysin XhlA C7M28_03684 PF04688 SPP1 phage holin C7M28_03685 PF01471 Putative peptidoglycan binding domain C7M28_03685 PF01510 N-acetylmuramoyl-L-alanine amidase C7M28_03685 PF01476 LysM domain C7M28_03686 PF14185 Antitoxin SpoIISB, type II toxin-antitoxin system C7M28_03687 PF14171 Toxin SpoIISA, type II toxin-antitoxin system C7M28_03688 PF01384 Phosphate transporter family C7M28_03689 PF01865 Protein of unknown function DUF47 C7M28_03690 PF13520 Amino acid permease C7M28_03691 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily C7M28_03692 PF13231 Dolichyl-phosphate-mannose-protein mannosyltransferase C7M28_03693 PF00535 Glycosyl transferase family 2 C7M28_03695 PF13180 PDZ domain C7M28_03696 PF14748 Pyrroline-5-carboxylate reductase dimerisation C7M28_03696 PF03807 NADP oxidoreductase coenzyme F420-dependent C7M28_03697 PF04951 D-aminopeptidase C7M28_03698 PF00528 Binding-protein-dependent transport system inner membrane component C7M28_03699 PF00528 Binding-protein-dependent transport system inner membrane component C7M28_03699 PF12911 N-terminal TM domain of oligopeptide transport permease C C7M28_03700 PF08352 Oligopeptide/dipeptide transporter, C-terminal region C7M28_03700 PF00005 ABC transporter C7M28_03701 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle C7M28_03703 PF17676 LD-carboxypeptidase C-terminal domain C7M28_03703 PF02016 LD-carboxypeptidase N-terminal domain C7M28_03704 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain C7M28_03704 PF13378 Enolase C-terminal domain-like C7M28_03705 PF00877 NlpC/P60 family C7M28_03706 PF08352 Oligopeptide/dipeptide transporter, C-terminal region C7M28_03706 PF00005 ABC transporter C7M28_03707 PF10282 Lactonase, 7-bladed beta-propeller C7M28_03709 PF03061 Thioesterase superfamily C7M28_03710 PF00175 Oxidoreductase NAD-binding domain C7M28_03710 PF00970 Oxidoreductase FAD-binding domain C7M28_03710 PF00042 Globin C7M28_03712 PF04239 Protein of unknown function (DUF421) C7M28_03713 PF12867 DinB superfamily C7M28_03714 PF13302 Acetyltransferase (GNAT) domain C7M28_03715 PF00893 Small Multidrug Resistance protein C7M28_03716 PF00893 Small Multidrug Resistance protein C7M28_03717 PF00551 Formyl transferase C7M28_03717 PF01842 ACT domain C7M28_03718 PF01472 PUA domain C7M28_03718 PF00696 Amino acid kinase family C7M28_03719 PF00171 Aldehyde dehydrogenase family C7M28_03720 PF02566 OsmC-like protein C7M28_03721 PF01047 MarR family C7M28_03722 PF02566 OsmC-like protein C7M28_03723 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region C7M28_03724 PF08267 Cobalamin-independent synthase, N-terminal domain C7M28_03724 PF01717 Cobalamin-independent synthase, Catalytic domain C7M28_03725 PF00082 Subtilase family C7M28_03726 PF01740 STAS domain C7M28_03727 PF02361 Cobalt transport protein C7M28_03728 PF00005 ABC transporter C7M28_03729 PF09819 ABC-type cobalt transport system, permease component C7M28_03730 PF07615 YKOF-related Family C7M28_03731 PF00486 Transcriptional regulatory protein, C terminal C7M28_03731 PF00072 Response regulator receiver domain C7M28_03732 PF00512 His Kinase A (phospho-acceptor) domain C7M28_03732 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C7M28_03732 PF00672 HAMP domain C7M28_03733 PF03413 Peptidase propeptide and YPEB domain C7M28_03734 PF03413 Peptidase propeptide and YPEB domain C7M28_03735 PF11132 Transcriptional regulator protein (SplA) C7M28_03737 PF01769 Divalent cation transporter C7M28_03737 PF00571 CBS domain C7M28_03737 PF03448 MgtE intracellular N domain C7M28_03738 PF13411 MerR HTH family regulatory protein C7M28_03741 PF01047 MarR family C7M28_03742 PF06925 Monogalactosyldiacylglycerol (MGDG) synthase C7M28_03744 PF00149 Calcineurin-like phosphoesterase C7M28_03746 PF00535 Glycosyl transferase family 2 C7M28_03747 PF01068 ATP dependent DNA ligase domain C7M28_03748 PF02735 Ku70/Ku80 beta-barrel domain C7M28_03749 PF03707 Bacterial signalling protein N terminal repeat C7M28_03749 PF00990 Diguanylate cyclase, GGDEF domain C7M28_03749 PF00563 EAL domain C7M28_03750 PF09335 SNARE associated Golgi protein C7M28_03751 PF03741 Integral membrane protein TerC family C7M28_03752 PF04542 Sigma-70 region 2 C7M28_03753 PF12791 Anti-sigma factor N-terminus C7M28_03754 PF00269 Small, acid-soluble spore proteins, alpha/beta type C7M28_03755 PF08876 Domain of unknown function (DUF1836) C7M28_03756 PF01435 Peptidase family M48 C7M28_03757 PF02386 Cation transport protein C7M28_03760 PF01757 Acyltransferase family C7M28_03761 PF13426 PAS domain C7M28_03761 PF13188 PAS domain C7M28_03761 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C7M28_03761 PF00512 His Kinase A (phospho-acceptor) domain C7M28_03761 PF00989 PAS fold C7M28_03762 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain C7M28_03762 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain C7M28_03764 PF01008 Initiation factor 2 subunit family C7M28_03765 PF01636 Phosphotransferase enzyme family C7M28_03766 PF00795 Carbon-nitrogen hydrolase C7M28_03767 PF00155 Aminotransferase class I and II C7M28_03768 PF00016 Ribulose bisphosphate carboxylase large chain, catalytic domain C7M28_03768 PF02788 Ribulose bisphosphate carboxylase large chain, N-terminal domain C7M28_03770 PF00596 Class II Aldolase and Adducin N-terminal domain C7M28_03771 PF03079 ARD/ARD' family C7M28_03772 PF06803 Protein of unknown function (DUF1232) C7M28_03773 PF09388 Spo0E like sporulation regulatory protein C7M28_03775 PF02743 Cache domain C7M28_03775 PF00512 His Kinase A (phospho-acceptor) domain C7M28_03775 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C7M28_03776 PF01047 MarR family C7M28_03777 PF13677 Membrane MotB of proton-channel complex MotA/MotB C7M28_03777 PF00691 OmpA family C7M28_03778 PF01618 MotA/TolQ/ExbB proton channel family C7M28_03779 PF00004 ATPase family associated with various cellular activities (AAA) C7M28_03779 PF10431 C-terminal, D2-small domain, of ClpB protein C7M28_03779 PF17871 AAA lid domain C7M28_03779 PF07724 AAA domain (Cdc48 subfamily) C7M28_03781 PF06508 Queuosine biosynthesis protein QueC C7M28_03782 PF01242 6-pyruvoyl tetrahydropterin synthase C7M28_03783 PF04055 Radical SAM superfamily C7M28_03784 PF14489 QueF-like protein C7M28_03785 PF01638 HxlR-like helix-turn-helix C7M28_03787 PF01476 LysM domain C7M28_03788 PF01476 LysM domain C7M28_03789 PF00704 Glycosyl hydrolases family 18 C7M28_03790 PF11514 Protein of unknown function (DUF3219) C7M28_03791 PF09953 Uncharacterized protein conserved in bacteria (DUF2187) C7M28_03793 PF07486 Cell Wall Hydrolase C7M28_03794 PF01943 Polysaccharide biosynthesis protein C7M28_03795 PF00578 AhpC/TSA family C7M28_03798 PF01321 Creatinase/Prolidase N-terminal domain C7M28_03798 PF00557 Metallopeptidase family M24 C7M28_03799 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family C7M28_03799 PF00356 Bacterial regulatory proteins, lacI family C7M28_03801 PF00874 PRD domain C7M28_03801 PF03123 CAT RNA binding domain C7M28_03802 PF02378 Phosphotransferase system, EIIC C7M28_03802 PF00367 phosphotransferase system, EIIB C7M28_03802 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 C7M28_03803 PF00381 PTS HPr component phosphorylation site C7M28_03804 PF05524 PEP-utilising enzyme, N-terminal C7M28_03804 PF00391 PEP-utilising enzyme, mobile domain C7M28_03804 PF02896 PEP-utilising enzyme, TIM barrel domain C7M28_03805 PF11132 Transcriptional regulator protein (SplA) C7M28_03807 PF00583 Acetyltransferase (GNAT) family C7M28_03808 PF02743 Cache domain C7M28_03808 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C7M28_03808 PF00672 HAMP domain C7M28_03809 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase C7M28_03809 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase C7M28_03810 PF00188 Cysteine-rich secretory protein family C7M28_03811 PF00905 Penicillin binding protein transpeptidase domain C7M28_03811 PF03717 Penicillin-binding Protein dimerisation domain C7M28_03812 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C7M28_03812 PF00512 His Kinase A (phospho-acceptor) domain C7M28_03812 PF00989 PAS fold C7M28_03812 PF08447 PAS fold C7M28_03813 PF00155 Aminotransferase class I and II C7M28_03815 PF01584 CheW-like domain C7M28_03815 PF00072 Response regulator receiver domain C7M28_03816 PF14177 YkyB-like protein C7M28_03817 PF07690 Major Facilitator Superfamily C7M28_03818 PF03734 L,D-transpeptidase catalytic domain C7M28_03818 PF01476 LysM domain C7M28_03819 PF00149 Calcineurin-like phosphoesterase C7M28_03819 PF10518 TAT (twin-arginine translocation) pathway signal sequence C7M28_03821 PF00563 EAL domain C7M28_03821 PF10388 EAL-domain associated signalling protein domain C7M28_03822 PF08796 Protein of unknown function (DUF1797) C7M28_03823 PF04308 Ribonuclease H-like C7M28_03824 PF14156 Antirepressor AbbA C7M28_03826 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C7M28_03826 PF03466 LysR substrate binding domain C7M28_03827 PF00258 Flavodoxin C7M28_03829 PF00258 Flavodoxin C7M28_03830 PF00132 Bacterial transferase hexapeptide (six repeats) C7M28_03830 PF14602 Hexapeptide repeat of succinyl-transferase C7M28_03830 PF08503 Tetrahydrodipicolinate succinyltransferase N-terminal C7M28_03831 PF07687 Peptidase dimerisation domain C7M28_03831 PF01546 Peptidase family M20/M25/M40 C7M28_03832 PF03698 Uncharacterised protein family (UPF0180) C7M28_03833 PF00924 Mechanosensitive ion channel C7M28_03834 PF10417 C-terminal domain of 1-Cys peroxiredoxin C7M28_03834 PF00578 AhpC/TSA family C7M28_03835 PF00578 AhpC/TSA family C7M28_03838 PF12804 MobA-like NTP transferase domain C7M28_03839 PF00899 ThiF family C7M28_03840 PF03453 MoeA N-terminal region (domain I and II) C7M28_03840 PF00994 Probable molybdopterin binding domain C7M28_03840 PF03454 MoeA C-terminal region (domain IV) C7M28_03841 PF03205 Molybdopterin guanine dinucleotide synthesis protein B C7M28_03842 PF02391 MoaE protein C7M28_03843 PF02597 ThiS family C7M28_03844 PF00664 ABC transporter transmembrane region C7M28_03844 PF00005 ABC transporter C7M28_03845 PF00664 ABC transporter transmembrane region C7M28_03845 PF00005 ABC transporter C7M28_03846 PF04893 Yip1 domain C7M28_03847 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion C7M28_03848 PF00005 ABC transporter C7M28_03849 PF12704 MacB-like periplasmic core domain C7M28_03849 PF02687 FtsX-like permease family C7M28_03850 PF00455 DeoR C terminal sensor domain C7M28_03850 PF08220 DeoR-like helix-turn-helix domain C7M28_03851 PF00294 pfkB family carbohydrate kinase C7M28_03852 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit C7M28_03852 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 C7M28_03853 PF10502 Signal peptidase, peptidase S26 C7M28_03855 PF00005 ABC transporter C7M28_03855 PF12848 ABC transporter C7M28_03856 PF08546 Ketopantoate reductase PanE/ApbA C terminal C7M28_03856 PF02558 Ketopantoate reductase PanE/ApbA C7M28_03857 PF02073 Thermophilic metalloprotease (M29) C7M28_03858 PF17447 Uncharacterized YkpC-like C7M28_03860 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin C7M28_03860 PF18277 AbrB C-terminal domain C7M28_03861 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C7M28_03861 PF00512 His Kinase A (phospho-acceptor) domain C7M28_03861 PF00989 PAS fold C7M28_03862 PF06094 Gamma-glutamyl cyclotransferase, AIG2-like C7M28_03863 PF02080 TrkA-C domain C7M28_03863 PF02254 TrkA-N domain C7M28_03864 PF13382 Adenine deaminase C-terminal domain C7M28_03864 PF01979 Amidohydrolase family C7M28_03865 PF00753 Metallo-beta-lactamase superfamily C7M28_03865 PF17770 Ribonuclease J C-terminal domain C7M28_03865 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain C7M28_03868 PF01327 Polypeptide deformylase C7M28_03870 PF10368 Putative cell-wall binding lipoprotein C7M28_03871 PF00676 Dehydrogenase E1 component C7M28_03872 PF02780 Transketolase, C-terminal domain C7M28_03872 PF02779 Transketolase, pyrimidine binding domain C7M28_03873 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) C7M28_03873 PF00364 Biotin-requiring enzyme C7M28_03873 PF02817 e3 binding domain C7M28_03874 PF07992 Pyridine nucleotide-disulphide oxidoreductase C7M28_03874 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain C7M28_03876 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain C7M28_03876 PF01276 Orn/Lys/Arg decarboxylase, major domain C7M28_03877 PF05256 Uncharacterised protein family (UPF0223) C7M28_03878 PF06335 Protein of unknown function (DUF1054) C7M28_03880 PF00459 Inositol monophosphatase family C7M28_03881 PF00583 Acetyltransferase (GNAT) family C7M28_03882 PF04072 Leucine carboxyl methyltransferase C7M28_03883 PF02868 Thermolysin metallopeptidase, alpha-helical domain C7M28_03883 PF07504 Fungalysin/Thermolysin Propeptide Motif C7M28_03883 PF03413 Peptidase propeptide and YPEB domain C7M28_03883 PF01447 Thermolysin metallopeptidase, catalytic domain C7M28_03886 PF04542 Sigma-70 region 2 C7M28_03886 PF08281 Sigma-70, region 4 C7M28_03887 PF13490 Putative zinc-finger C7M28_03889 PF17259 Family of unknown function (DUF5325) C7M28_03891 PF14036 YlaH-like protein C7M28_03892 PF09963 Uncharacterized protein conserved in bacteria (DUF2197) C7M28_03893 PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) C7M28_03894 PF13638 PIN domain C7M28_03894 PF02562 PhoH-like protein C7M28_03896 PF04960 Glutaminase C7M28_03897 PF07408 Protein of unknown function (DUF1507) C7M28_03898 PF01098 Cell cycle protein C7M28_03899 PF02436 Conserved carboxylase domain C7M28_03899 PF00682 HMGL-like C7M28_03899 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain C7M28_03899 PF00364 Biotin-requiring enzyme C7M28_03899 PF00289 Biotin carboxylase, N-terminal domain C7M28_03899 PF02785 Biotin carboxylase C-terminal domain C7M28_03900 PF02628 Cytochrome oxidase assembly protein C7M28_03901 PF01040 UbiA prenyltransferase family C7M28_03902 PF02790 Cytochrome C oxidase subunit II, transmembrane domain C7M28_03902 PF00116 Cytochrome C oxidase subunit II, periplasmic domain C7M28_03902 PF00034 Cytochrome c C7M28_03903 PF00115 Cytochrome C and Quinol oxidase polypeptide I C7M28_03904 PF00510 Cytochrome c oxidase subunit III C7M28_03905 PF03626 Prokaryotic Cytochrome C oxidase subunit IV C7M28_03906 PF09678 Cytochrome c oxidase caa3 assembly factor (Caa3_CtaG) C7M28_03907 PF08868 YugN-like family C7M28_03908 PF00571 CBS domain C7M28_03909 PF14504 CAP-associated N-terminal C7M28_03909 PF00188 Cysteine-rich secretory protein family C7M28_03910 PF14071 Putative coat protein C7M28_03911 PF14003 YlbE-like protein C7M28_03912 PF06133 Control of competence regulator ComK, YlbF/YmcA C7M28_03913 PF09902 Uncharacterized protein conserved in bacteria (DUF2129) C7M28_03915 PF01467 Cytidylyltransferase-like C7M28_03916 PF07670 Nucleoside recognition C7M28_03917 PF01734 Patatin-like phospholipase C7M28_03918 PF13180 PDZ domain C7M28_03918 PF05362 Lon protease (S16) C-terminal proteolytic domain C7M28_03919 PF05636 HIGH Nucleotidyl Transferase C7M28_03921 PF02620 Large ribosomal RNA subunit accumulation protein YceD C7M28_03922 PF01783 Ribosomal L32p protein family C7M28_03924 PF00583 Acetyltransferase (GNAT) family C7M28_03925 PF02558 Ketopantoate reductase PanE/ApbA C7M28_03925 PF08546 Ketopantoate reductase PanE/ApbA C terminal C7M28_03926 PF10079 Bacillithiol biosynthesis BshC C7M28_03927 PF02381 MraZ protein, putative antitoxin-like C7M28_03928 PF01795 MraW methylase family C7M28_03931 PF03793 PASTA domain C7M28_03931 PF00905 Penicillin binding protein transpeptidase domain C7M28_03931 PF03717 Penicillin-binding Protein dimerisation domain C7M28_03932 PF08245 Mur ligase middle domain C7M28_03932 PF01225 Mur ligase family, catalytic domain C7M28_03932 PF02875 Mur ligase family, glutamate ligase domain C7M28_03933 PF00953 Glycosyl transferase family 4 C7M28_03933 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 C7M28_03934 PF08245 Mur ligase middle domain C7M28_03934 PF02875 Mur ligase family, glutamate ligase domain C7M28_03935 PF01098 Cell cycle protein C7M28_03936 PF03033 Glycosyltransferase family 28 N-terminal domain C7M28_03936 PF04101 Glycosyltransferase family 28 C-terminal domain C7M28_03937 PF01565 FAD binding domain C7M28_03937 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain C7M28_03938 PF08478 POTRA domain, FtsQ-type C7M28_03939 PF05949 Bacterial protein of unknown function (DUF881) C7M28_03940 PF05949 Bacterial protein of unknown function (DUF881) C7M28_03941 PF06947 Protein of unknown function (DUF1290) C7M28_03942 PF02491 SHS2 domain inserted in FTSA C7M28_03943 PF00091 Tubulin/FtsZ family, GTPase domain C7M28_03943 PF12327 FtsZ family, C-terminal domain C7M28_03944 PF05922 Peptidase inhibitor I9 C7M28_03944 PF00082 Subtilase family C7M28_03945 PF03419 Sporulation factor SpoIIGA C7M28_03946 PF04545 Sigma-70, region 4 C7M28_03946 PF04542 Sigma-70 region 2 C7M28_03947 PF04545 Sigma-70, region 4 C7M28_03947 PF04539 Sigma-70 region 3 C7M28_03947 PF04542 Sigma-70 region 2 C7M28_03948 PF00005 ABC transporter C7M28_03949 PF07687 Peptidase dimerisation domain C7M28_03949 PF01546 Peptidase family M20/M25/M40 C7M28_03950 PF05239 PRC-barrel domain C7M28_03952 PF01168 Alanine racemase, N-terminal domain C7M28_03953 PF04472 Cell division protein SepF C7M28_03954 PF02325 YGGT family C7M28_03955 PF17774 Putative RNA-binding domain in YlmH C7M28_03955 PF01479 S4 domain C7M28_03956 PF05103 DivIVA protein C7M28_03957 PF08264 Anticodon-binding domain of tRNA C7M28_03957 PF00133 tRNA synthetases class I (I, L, M and V) C7M28_03958 PF01258 Prokaryotic dksA/traR C4-type zinc finger C7M28_03959 PF01252 Signal peptidase (SPase) II C7M28_03960 PF01479 S4 domain C7M28_03960 PF00849 RNA pseudouridylate synthase C7M28_03961 PF00156 Phosphoribosyl transferase domain C7M28_03962 PF00860 Permease family C7M28_03963 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain C7M28_03963 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain C7M28_03964 PF01979 Amidohydrolase family C7M28_03965 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain C7M28_03965 PF00117 Glutamine amidotransferase class-I C7M28_03966 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain C7M28_03966 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain C7M28_03966 PF02142 MGS-like domain C7M28_03967 PF00175 Oxidoreductase NAD-binding domain C7M28_03967 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B C7M28_03968 PF01180 Dihydroorotate dehydrogenase C7M28_03969 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family C7M28_03970 PF00156 Phosphoribosyl transferase domain C7M28_03972 PF01507 Phosphoadenosine phosphosulfate reductase family C7M28_03973 PF01384 Phosphate transporter family C7M28_03974 PF01747 ATP-sulfurylase C7M28_03974 PF14306 PUA-like domain C7M28_03976 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases C7M28_03977 PF01903 CbiX C7M28_03979 PF05670 NFACT protein RNA binding domain C7M28_03980 PF00690 Cation transporter/ATPase, N-terminus C7M28_03980 PF00689 Cation transporting ATPase, C-terminus C7M28_03981 PF03755 YicC-like family, N-terminal region C7M28_03981 PF08340 Domain of unknown function (DUF1732) C7M28_03982 PF04025 Domain of unknown function (DUF370) C7M28_03983 PF00625 Guanylate kinase C7M28_03984 PF01192 RNA polymerase Rpb6 C7M28_03985 PF02441 Flavoprotein C7M28_03985 PF04127 DNA / pantothenate metabolism flavoprotein C7M28_03986 PF04851 Type III restriction enzyme, res subunit C7M28_03986 PF18319 PriA DNA helicase Cys-rich region (CRR) domain C7M28_03986 PF18074 Primosomal protein N C-terminal domain C7M28_03986 PF17764 3′ DNA-binding domain (3′BD) C7M28_03986 PF00271 Helicase conserved C-terminal domain C7M28_03987 PF01327 Polypeptide deformylase C7M28_03988 PF02911 Formyl transferase, C-terminal domain C7M28_03988 PF00551 Formyl transferase C7M28_03989 PF01189 16S rRNA methyltransferase RsmB/F C7M28_03989 PF01029 NusB family C7M28_03990 PF04055 Radical SAM superfamily C7M28_03992 PF03793 PASTA domain C7M28_03992 PF00069 Protein kinase domain C7M28_03993 PF03193 RsgA GTPase C7M28_03993 PF16745 RsgA N-terminal domain C7M28_03994 PF00834 Ribulose-phosphate 3 epimerase family C7M28_03995 PF04265 Thiamin pyrophosphokinase, vitamin B1 binding domain C7M28_03995 PF04263 Thiamin pyrophosphokinase, catalytic domain C7M28_03996 PF00830 Ribosomal L28 family C7M28_03997 PF03780 Asp23 family, cell envelope-related function C7M28_03998 PF13684 Dihydroxyacetone kinase family C7M28_03998 PF02734 DAK2 domain C7M28_03999 PF03315 Serine dehydratase beta chain C7M28_03999 PF01842 ACT domain C7M28_04000 PF03313 Serine dehydratase alpha chain C7M28_04001 PF00271 Helicase conserved C-terminal domain C7M28_04001 PF00270 DEAD/DEAH box helicase C7M28_04001 PF17191 RecG wedge domain C7M28_04002 PF03061 Thioesterase superfamily C7M28_04003 PF02504 Fatty acid synthesis protein C7M28_04004 PF00698 Acyl transferase domain C7M28_04006 PF00550 Phosphopantetheine attachment site C7M28_04007 PF00035 Double-stranded RNA binding motif C7M28_04007 PF14622 Ribonuclease-III-like C7M28_04008 PF06470 SMC proteins Flexible Hinge Domain C7M28_04008 PF02463 RecF/RecN/SMC N terminal domain C7M28_04009 PF00448 SRP54-type protein, GTPase domain C7M28_04009 PF02881 SRP54-type protein, helical bundle domain C7M28_04010 PF02369 Bacterial Ig-like domain (group 1) C7M28_04011 PF04297 Putative helix-turn-helix protein, YlxM / p13 like C7M28_04012 PF02881 SRP54-type protein, helical bundle domain C7M28_04012 PF00448 SRP54-type protein, GTPase domain C7M28_04012 PF02978 Signal peptide binding domain C7M28_04013 PF00886 Ribosomal protein S16 C7M28_04015 PF11068 YlqD protein C7M28_04016 PF05239 PRC-barrel domain C7M28_04016 PF01782 RimM N-terminal domain C7M28_04017 PF01746 tRNA (Guanine-1)-methyltransferase C7M28_04018 PF01245 Ribosomal protein L19 C7M28_04019 PF01926 50S ribosome-binding GTPase C7M28_04020 PF01351 Ribonuclease HII C7M28_04022 PF01312 FlhB HrpN YscU SpaS Family C7M28_04023 PF00549 CoA-ligase C7M28_04023 PF08442 ATP-grasp domain C7M28_04024 PF02629 CoA binding domain C7M28_04024 PF00549 CoA-ligase C7M28_04025 PF02481 DNA recombination-mediator protein A C7M28_04026 PF01131 DNA topoisomerase C7M28_04026 PF01751 Toprim domain C7M28_04026 PF01396 Topoisomerase DNA binding C4 zinc finger C7M28_04027 PF01134 Glucose inhibited division protein A C7M28_04028 PF00589 Phage integrase family C7M28_04028 PF02899 Phage integrase, N-terminal SAM-like domain C7M28_04029 PF00227 Proteasome subunit C7M28_04030 PF07724 AAA domain (Cdc48 subfamily) C7M28_04030 PF00004 ATPase family associated with various cellular activities (AAA) C7M28_04030 PF10431 C-terminal, D2-small domain, of ClpB protein C7M28_04031 PF08222 CodY helix-turn-helix domain C7M28_04031 PF06018 CodY GAF-like domain C7M28_04032 PF00460 Flagella basal body rod protein C7M28_04033 PF06429 Flagellar basal body rod FlgEFG protein C-terminal C7M28_04033 PF00460 Flagella basal body rod protein C7M28_04034 PF02049 Flagellar hook-basal body complex protein FliE C7M28_04035 PF01514 Secretory protein of YscJ/FliF family C7M28_04035 PF08345 Flagellar M-ring protein C-terminal C7M28_04036 PF01706 FliG C-terminal domain C7M28_04036 PF14842 FliG N-terminal domain C7M28_04036 PF14841 FliG middle domain C7M28_04037 PF02108 Flagellar assembly protein FliH C7M28_04038 PF18269 T3SS EscN ATPase C-terminal domain C7M28_04038 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain C7M28_04038 PF02874 ATP synthase alpha/beta family, beta-barrel domain C7M28_04039 PF02050 Flagellar FliJ protein C7M28_04040 PF03448 MgtE intracellular N domain C7M28_04041 PF02120 Flagellar hook-length control protein FliK C7M28_04042 PF03963 Flagellar hook capping protein - N-terminal region C7M28_04043 PF06429 Flagellar basal body rod FlgEFG protein C-terminal C7M28_04043 PF00460 Flagella basal body rod protein C7M28_04044 PF03748 Flagellar basal body-associated protein FliL C7M28_04045 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term C7M28_04045 PF02154 Flagellar motor switch protein FliM C7M28_04046 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term C7M28_04046 PF04509 CheC-like family C7M28_04047 PF00072 Response regulator receiver domain C7M28_04048 PF04347 Flagellar biosynthesis protein, FliO C7M28_04049 PF00813 FliP family C7M28_04050 PF01313 Bacterial export proteins, family 3 C7M28_04051 PF01311 Bacterial export proteins, family 1 C7M28_04052 PF01312 FlhB HrpN YscU SpaS Family C7M28_04053 PF00771 FHIPEP family C7M28_04054 PF00448 SRP54-type protein, GTPase domain C7M28_04055 PF10609 NUBPL iron-transfer P-loop NTPase C7M28_04056 PF01339 CheB methylesterase C7M28_04056 PF00072 Response regulator receiver domain C7M28_04057 PF01584 CheW-like domain C7M28_04057 PF02895 Signal transducing histidine kinase, homodimeric domain C7M28_04057 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C7M28_04057 PF01627 Hpt domain C7M28_04057 PF07194 P2 response regulator binding domain C7M28_04058 PF01584 CheW-like domain C7M28_04059 PF04509 CheC-like family C7M28_04060 PF03975 CheD chemotactic sensory transduction C7M28_04061 PF04539 Sigma-70 region 3 C7M28_04061 PF04542 Sigma-70 region 2 C7M28_04061 PF04545 Sigma-70, region 4 C7M28_04063 PF00318 Ribosomal protein S2 C7M28_04064 PF00889 Elongation factor TS C7M28_04065 PF00696 Amino acid kinase family C7M28_04066 PF01765 Ribosome recycling factor C7M28_04067 PF01255 Putative undecaprenyl diphosphate synthase C7M28_04069 PF13288 DXP reductoisomerase C-terminal domain C7M28_04069 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase C7M28_04069 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain C7M28_04070 PF17820 PDZ domain C7M28_04070 PF02163 Peptidase family M50 C7M28_04071 PF04073 Aminoacyl-tRNA editing domain C7M28_04071 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) C7M28_04071 PF03129 Anticodon binding domain C7M28_04072 PF00929 Exonuclease C7M28_04072 PF07733 Bacterial DNA polymerase III alpha NTPase domain C7M28_04072 PF11490 DNA polymerase III polC-type N-terminus II C7M28_04072 PF14480 DNA polymerase III polC-type N-terminus I C7M28_04072 PF14579 Helix-hairpin-helix motif C7M28_04072 PF17657 Bacterial DNA polymerase III alpha subunit finger domain C7M28_04072 PF02811 PHP domain C7M28_04073 PF02576 RimP N-terminal domain C7M28_04073 PF17384 RimP C-terminal SH3 domain C7M28_04074 PF13184 NusA-like KH domain C7M28_04074 PF00575 S1 RNA binding domain C7M28_04074 PF08529 NusA N-terminal domain C7M28_04075 PF04296 Protein of unknown function (DUF448) C7M28_04076 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family C7M28_04077 PF04760 Translation initiation factor IF-2, N-terminal region C7M28_04077 PF00009 Elongation factor Tu GTP binding domain C7M28_04077 PF11987 Translation-initiation factor 2 C7M28_04078 PF04456 Protein of unknown function (DUF503) C7M28_04079 PF02033 Ribosome-binding factor A C7M28_04080 PF01509 TruB family pseudouridylate synthase (N terminal domain) C7M28_04080 PF16198 tRNA pseudouridylate synthase B C-terminal domain C7M28_04081 PF01687 Riboflavin kinase C7M28_04081 PF06574 FAD synthetase C7M28_04082 PF00312 Ribosomal protein S15 C7M28_04083 PF00575 S1 RNA binding domain C7M28_04083 PF03725 3' exoribonuclease family, domain 2 C7M28_04083 PF00013 KH domain C7M28_04083 PF01138 3' exoribonuclease family, domain 1 C7M28_04083 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain C7M28_04084 PF01522 Polysaccharide deacetylase C7M28_04085 PF05193 Peptidase M16 inactive domain C7M28_04085 PF00675 Insulinase (Peptidase family M16) C7M28_04086 PF05239 PRC-barrel domain C7M28_04087 PF01262 Alanine dehydrogenase/PNT, C-terminal domain C7M28_04087 PF16924 Dipicolinate synthase subunit A N-terminal domain C7M28_04088 PF02441 Flavoprotein C7M28_04089 PF02774 Semialdehyde dehydrogenase, dimerisation domain C7M28_04089 PF01118 Semialdehyde dehydrogenase, NAD binding domain C7M28_04090 PF13840 ACT domain C7M28_04090 PF00696 Amino acid kinase family C7M28_04091 PF00701 Dihydrodipicolinate synthetase family C7M28_04092 PF17770 Ribonuclease J C-terminal domain C7M28_04092 PF00753 Metallo-beta-lactamase superfamily C7M28_04092 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain C7M28_04093 PF00574 Clp protease C7M28_04094 PF14035 YlzJ-like protein C7M28_04095 PF09397 Ftsk gamma domain C7M28_04095 PF17854 FtsK alpha domain C7M28_04095 PF01580 FtsK/SpoIIIE family C7M28_04096 PF07702 UTRA domain C7M28_04096 PF00392 Bacterial regulatory proteins, gntR family C7M28_04097 PF07690 Major Facilitator Superfamily C7M28_04098 PF05193 Peptidase M16 inactive domain C7M28_04099 PF05193 Peptidase M16 inactive domain C7M28_04099 PF00675 Insulinase (Peptidase family M16) C7M28_04101 PF11588 Protein of unknown function (DUF3243) C7M28_04102 PF11868 Protein of unknown function (DUF3388) C7M28_04103 PF13464 Domain of unknown function (DUF4115) C7M28_04104 PF01066 CDP-alcohol phosphatidyltransferase C7M28_04105 PF00994 Probable molybdopterin binding domain C7M28_04105 PF18146 Damage-inducible protein CinA KH domain C7M28_04105 PF02464 Competence-damaged protein C7M28_04106 PF00154 recA bacterial DNA recombination protein C7M28_04107 PF00144 Beta-lactamase C7M28_04108 PF00013 KH domain C7M28_04108 PF12072 Domain of unknown function (DUF3552) C7M28_04108 PF01966 HD domain C7M28_04109 PF13277 YmdB-like protein C7M28_04110 PF04232 Stage V sporulation protein S (SpoVS) C7M28_04111 PF00107 Zinc-binding dehydrogenase C7M28_04111 PF08240 Alcohol dehydrogenase GroES-like domain C7M28_04112 PF00155 Aminotransferase class I and II C7M28_04113 PF01938 TRAM domain C7M28_04113 PF04055 Radical SAM superfamily C7M28_04113 PF00919 Uncharacterized protein family UPF0004 C7M28_04114 PF06133 Control of competence regulator ComK, YlbF/YmcA C7M28_04115 PF10628 Outer spore coat protein E (CotE) C7M28_04116 PF00488 MutS domain V C7M28_04116 PF05190 MutS family domain IV C7M28_04116 PF05192 MutS domain III C7M28_04116 PF05188 MutS domain II C7M28_04116 PF01624 MutS domain I C7M28_04117 PF08676 MutL C terminal dimerisation domain C7M28_04117 PF01119 DNA mismatch repair protein, C-terminal domain C7M28_04118 PF14184 Regulatory protein YrvL C7M28_04121 PF13977 BetI-type transcriptional repressor, C-terminal C7M28_04121 PF00440 Bacterial regulatory proteins, tetR family C7M28_04122 PF00753 Metallo-beta-lactamase superfamily C7M28_04123 PF00698 Acyl transferase domain C7M28_04124 PF00698 Acyl transferase domain C7M28_04125 PF00698 Acyl transferase domain C7M28_04125 PF03060 Nitronate monooxygenase C7M28_04126 PF00550 Phosphopantetheine attachment site C7M28_04127 PF02801 Beta-ketoacyl synthase, C-terminal domain C7M28_04127 PF00109 Beta-ketoacyl synthase, N-terminal domain C7M28_04128 PF08540 Hydroxymethylglutaryl-coenzyme A synthase C terminal C7M28_04128 PF01154 Hydroxymethylglutaryl-coenzyme A synthase N terminal C7M28_04129 PF00378 Enoyl-CoA hydratase/isomerase C7M28_04130 PF00378 Enoyl-CoA hydratase/isomerase C7M28_04131 PF02801 Beta-ketoacyl synthase, C-terminal domain C7M28_04131 PF08659 KR domain C7M28_04131 PF00109 Beta-ketoacyl synthase, N-terminal domain C7M28_04131 PF00668 Condensation domain C7M28_04131 PF16197 Ketoacyl-synthetase C-terminal extension C7M28_04131 PF00501 AMP-binding enzyme C7M28_04131 PF00550 Phosphopantetheine attachment site C7M28_04131 PF14765 Polyketide synthase dehydratase C7M28_04131 PF13193 AMP-binding enzyme C-terminal domain C7M28_04132 PF02801 Beta-ketoacyl synthase, C-terminal domain C7M28_04132 PF14765 Polyketide synthase dehydratase C7M28_04132 PF00550 Phosphopantetheine attachment site C7M28_04132 PF16197 Ketoacyl-synthetase C-terminal extension C7M28_04132 PF00109 Beta-ketoacyl synthase, N-terminal domain C7M28_04132 PF08659 KR domain C7M28_04133 PF02801 Beta-ketoacyl synthase, C-terminal domain C7M28_04133 PF00109 Beta-ketoacyl synthase, N-terminal domain C7M28_04133 PF16197 Ketoacyl-synthetase C-terminal extension C7M28_04133 PF08242 Methyltransferase domain C7M28_04133 PF00550 Phosphopantetheine attachment site C7M28_04133 PF14765 Polyketide synthase dehydratase C7M28_04133 PF08659 KR domain C7M28_04134 PF00501 AMP-binding enzyme C7M28_04134 PF00668 Condensation domain C7M28_04134 PF16197 Ketoacyl-synthetase C-terminal extension C7M28_04134 PF00109 Beta-ketoacyl synthase, N-terminal domain C7M28_04134 PF02801 Beta-ketoacyl synthase, C-terminal domain C7M28_04134 PF08659 KR domain C7M28_04134 PF00550 Phosphopantetheine attachment site C7M28_04134 PF13193 AMP-binding enzyme C-terminal domain C7M28_04134 PF14765 Polyketide synthase dehydratase C7M28_04135 PF00975 Thioesterase domain C7M28_04135 PF14765 Polyketide synthase dehydratase C7M28_04135 PF00550 Phosphopantetheine attachment site C7M28_04135 PF08242 Methyltransferase domain C7M28_04135 PF02801 Beta-ketoacyl synthase, C-terminal domain C7M28_04135 PF00109 Beta-ketoacyl synthase, N-terminal domain C7M28_04135 PF16197 Ketoacyl-synthetase C-terminal extension C7M28_04136 PF00067 Cytochrome P450 C7M28_04139 PF00082 Subtilase family C7M28_04158 PF01464 Transglycosylase SLT domain C7M28_04169 PF14410 HNH/ENDO VII superfamily nuclease with conserved GHE residues C7M28_04169 PF04740 LXG domain of WXG superfamily C7M28_04169 PF14449 Pre-toxin TG C7M28_04180 PF00521 DNA gyrase/topoisomerase IV, subunit A C7M28_04180 PF03989 DNA gyrase C-terminal domain, beta-propeller C7M28_04181 PF00986 DNA gyrase B subunit, carboxyl terminus C7M28_04181 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C7M28_04181 PF01751 Toprim domain C7M28_04181 PF00204 DNA gyrase B C7M28_04182 PF18008 Replication initiator protein A C-terminal domain C7M28_04182 PF06970 Replication initiator protein A (RepA) N-terminus C7M28_04184 PF00265 Thymidine kinase C7M28_04191 PF00625 Guanylate kinase C7M28_04195 PF14579 Helix-hairpin-helix motif C7M28_04195 PF02811 PHP domain C7M28_04195 PF07733 Bacterial DNA polymerase III alpha NTPase domain C7M28_04195 PF17657 Bacterial DNA polymerase III alpha subunit finger domain C7M28_04199 PF00075 RNase H C7M28_04206 PF17768 RecJ OB domain C7M28_04206 PF01368 DHH family C7M28_04214 PF00258 Flavodoxin C7M28_04215 PF00268 Ribonucleotide reductase, small chain C7M28_04216 PF03477 ATP cone domain C7M28_04216 PF02867 Ribonucleotide reductase, barrel domain C7M28_04216 PF00317 Ribonucleotide reductase, all-alpha domain C7M28_04224 PF10850 Protein of unknown function (DUF2653) C7M28_04231 PF00589 Phage integrase family C7M28_04234 PF01476 LysM domain C7M28_04234 PF06725 3D domain C7M28_04239 PF18801 response regulator aspartate phosphatase H, N terminal