A3772_00005 SM00382 ATPases associated with a variety of cellular activities A3772_00005 SM00760 Bacterial dnaA protein helix-turn-helix domain A3772_00010 SM00480 DNA polymerase III beta subunit A3772_00030 SM00387 Histidine kinase-like ATPases A3772_00030 SM00433 TopoisomeraseII A3772_00035 SM00434 DNA Topoisomerase IV A3772_00070 SM00116 Domain in cystathionine beta-synthase and other proteins. A3772_00070 SM01240 A3772_00070 A3772_00075 SM00936 Penicillin-binding protein 5, C-terminal domain A3772_00110 SM00257 Lysin motif A3772_00110 SM00636 A3772_00110 A3772_00130 SM00382 ATPases associated with a variety of cellular activities A3772_00140 SM00493 A3772_00140 A3772_00235 SM00465 GIY-YIG type nucleases (URI domain) A3772_00245 SM00966 SpoVT / AbrB like domain A3772_00260 SM01208 A3772_00260 A3772_00265 SM00493 A3772_00265 A3772_00270 SM00650 Ribosomal RNA adenine dimethylases A3772_00320 SM01400 A3772_00320 A3772_00340 SM00487 DEAD-like helicases superfamily A3772_00340 SM00490 helicase superfamily c-terminal domain A3772_00340 SM00982 A3772_00340 A3772_00340 SM01058 CarD-like/TRCF domain A3772_00345 SM00966 SpoVT / AbrB like domain A3772_00360 SM00363 S4 RNA-binding domain A3772_00380 SM00316 Ribosomal protein S1-like RNA-binding domain A3772_00395 SM00331 Sigma factor PP2C-like phosphatases A3772_00395 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain A3772_00405 SM00220 Serine/Threonine protein kinases, catalytic domain A3772_00410 SM00977 TilS substrate C-terminal domain A3772_00420 SM00382 ATPases associated with a variety of cellular activities A3772_00465 SM00905 Dihydroneopterin aldolase A3772_00475 SM00530 Helix-turn-helix XRE-family like proteins A3772_00585 SM00382 ATPases associated with a variety of cellular activities A3772_00585 SM01086 C-terminal, D2-small domain, of ClpB protein A3772_00590 SM00382 ATPases associated with a variety of cellular activities A3772_00600 SM00670 Large family of predicted nucleotide-binding domains A3772_00630 SM00840 A3772_00630 A3772_00635 SM00535 Ribonuclease III family A3772_00640 SM00967 RNA 2'-O ribose methyltransferase substrate binding A3772_00665 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. A3772_00665 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. A3772_00670 SM00649 Ribosomal protein L11/L12 A3772_00700 SM00663 RNA polymerase I subunit A N-terminus A3772_00720 SM00838 Elongation factor G C-terminus A3772_00720 SM00889 Elongation factor G, domain IV A3772_00735 SM01403 A3772_00735 A3772_00755 SM01382 A3772_00755 A3772_00755 SM01383 A3772_00755 A3772_00770 SM00322 K homology RNA-binding domain A3772_00790 SM01374 A3772_00790 A3772_00795 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. A3772_00860 SM00316 Ribosomal protein S1-like RNA-binding domain A3772_00880 SM00662 RNA polymerases D A3772_00890 SM00382 ATPases associated with a variety of cellular activities A3772_00895 SM00382 ATPases associated with a variety of cellular activities A3772_00930 SM00646 A3772_00930 A3772_00945 SM01251 A3772_00945 A3772_01065 SM00342 helix_turn_helix, arabinose operon control protein A3772_01165 SM00478 endonuclease III A3772_01170 SM00342 helix_turn_helix, arabinose operon control protein A3772_01210 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor A3772_01230 SM00729 Elongator protein 3, MiaB family, Radical SAM A3772_01240 SM00382 ATPases associated with a variety of cellular activities A3772_01265 SM00448 cheY-homologous receiver domain A3772_01265 SM00862 Transcriptional regulatory protein, C terminal A3772_01270 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain A3772_01270 SM00388 His Kinase A (phosphoacceptor) domain A3772_01345 SM00347 helix_turn_helix multiple antibiotic resistance protein A3772_01375 SM00342 helix_turn_helix, arabinose operon control protein A3772_01425 SM00342 helix_turn_helix, arabinose operon control protein A3772_01430 SM00450 Rhodanese Homology Domain A3772_01450 SM00345 helix_turn_helix gluconate operon transcriptional repressor A3772_01450 SM00866 A3772_01450 A3772_01490 SM00387 Histidine kinase-like ATPases A3772_01495 SM00448 cheY-homologous receiver domain A3772_01500 SM01130 A3772_01500 A3772_01515 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain A3772_01520 SM00345 helix_turn_helix gluconate operon transcriptional repressor A3772_01520 SM00895 A3772_01520 A3772_01525 SM00858 A3772_01525 A3772_01545 SM00448 cheY-homologous receiver domain A3772_01545 SM00862 Transcriptional regulatory protein, C terminal A3772_01550 SM00387 Histidine kinase-like ATPases A3772_01550 SM00388 His Kinase A (phosphoacceptor) domain A3772_01555 SM00382 ATPases associated with a variety of cellular activities A3772_01580 SM00327 von Willebrand factor (vWF) type A domain A3772_01625 SM00870 A3772_01625 A3772_01645 SM00387 Histidine kinase-like ATPases A3772_01650 SM00448 cheY-homologous receiver domain A3772_01650 SM00850 LytTr DNA-binding domain A3772_01655 SM00382 ATPases associated with a variety of cellular activities A3772_01690 SM00028 Tetratricopeptide repeats A3772_01700 SM00642 Alpha-amylase domain A3772_01710 SM00382 ATPases associated with a variety of cellular activities A3772_01765 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor A3772_01770 SM00116 Domain in cystathionine beta-synthase and other proteins. A3772_01770 SM00382 ATPases associated with a variety of cellular activities A3772_01805 SM00632 A3772_01805 A3772_01805 SM00642 Alpha-amylase domain A3772_01825 SM00347 helix_turn_helix multiple antibiotic resistance protein A3772_01940 SM00926 Molybdopterin oxidoreductase Fe4S4 domain A3772_01970 SM00833 Cobalamin synthesis protein cobW C-terminal domain A3772_01980 SM00062 Bacterial periplasmic substrate-binding proteins A3772_02015 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). A3772_02015 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain A3772_02025 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family A3772_02040 SM00823 Phosphopantetheine attachment site A3772_02040 SM01294 A3772_02040 A3772_02045 SM00823 Phosphopantetheine attachment site A3772_02045 SM01294 A3772_02045 A3772_02050 SM00823 Phosphopantetheine attachment site A3772_02075 SM00345 helix_turn_helix gluconate operon transcriptional repressor A3772_02090 SM00382 ATPases associated with a variety of cellular activities A3772_02100 SM00062 Bacterial periplasmic substrate-binding proteins A3772_02140 SM00710 Parallel beta-helix repeats A3772_02140 SM00722 Domain present in carbohydrate binding proteins and sugar hydrolses A3772_02165 SM00382 ATPases associated with a variety of cellular activities A3772_02175 SM00448 cheY-homologous receiver domain A3772_02175 SM00862 Transcriptional regulatory protein, C terminal A3772_02180 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain A3772_02180 SM00387 Histidine kinase-like ATPases A3772_02180 SM00388 His Kinase A (phosphoacceptor) domain A3772_02185 SM00028 Tetratricopeptide repeats A3772_02215 SM00382 ATPases associated with a variety of cellular activities A3772_02245 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor A3772_02250 SM00345 helix_turn_helix gluconate operon transcriptional repressor A3772_02285 SM00420 helix_turn_helix, Deoxyribose operon repressor A3772_02310 SM01329 A3772_02310 A3772_02360 SM00796 Allophanate hydrolase subunit 1 A3772_02365 SM00797 Allophanate hydrolase subunit 2 A3772_02370 SM00346 helix_turn_helix isocitrate lyase regulation A3772_02445 SM00344 helix_turn_helix ASNC type A3772_02450 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain A3772_02450 SM00437 Bacterial DNA topoisomerase I DNA-binding domain A3772_02450 SM00493 A3772_02450 A3772_02460 SM00267 diguanylate cyclase A3772_02550 SM00091 PAS domain A3772_02550 SM00387 Histidine kinase-like ATPases A3772_02555 SM00448 cheY-homologous receiver domain A3772_02575 SM00382 ATPases associated with a variety of cellular activities A3772_02625 SM00487 DEAD-like helicases superfamily A3772_02625 SM00490 helicase superfamily c-terminal domain A3772_02655 SM01005 Alanine racemase, C-terminal domain A3772_02680 SM00387 Histidine kinase-like ATPases A3772_02685 SM00331 Sigma factor PP2C-like phosphatases A3772_02705 SM00331 Sigma factor PP2C-like phosphatases A3772_02705 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain A3772_02725 SM00347 helix_turn_helix multiple antibiotic resistance protein A3772_02730 SM00316 Ribosomal protein S1-like RNA-binding domain A3772_02730 SM00732 Likely ribonuclease with RNase H fold. A3772_02740 SM00731 SprT homologues. A3772_02785 SM00344 helix_turn_helix ASNC type A3772_02790 SM00344 helix_turn_helix ASNC type A3772_02830 SM00357 Cold shock protein domain A3772_02835 SM01058 CarD-like/TRCF domain A3772_02845 SM00342 helix_turn_helix, arabinose operon control protein A3772_02855 SM00342 helix_turn_helix, arabinose operon control protein A3772_02855 SM00871 Bacterial transcription activator, effector binding domain A3772_02860 SM00345 helix_turn_helix gluconate operon transcriptional repressor A3772_02890 SM00345 helix_turn_helix gluconate operon transcriptional repressor A3772_02940 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor A3772_02965 SM00345 helix_turn_helix gluconate operon transcriptional repressor A3772_02975 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor A3772_02990 SM00387 Histidine kinase-like ATPases A3772_02995 SM00421 helix_turn_helix, Lux Regulon A3772_02995 SM00448 cheY-homologous receiver domain A3772_03015 SM00422 helix_turn_helix, mercury resistance A3772_03015 SM00871 Bacterial transcription activator, effector binding domain A3772_03100 SM00382 ATPases associated with a variety of cellular activities A3772_03115 SM00347 helix_turn_helix multiple antibiotic resistance protein A3772_03130 SM00347 helix_turn_helix multiple antibiotic resistance protein A3772_03130 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor A3772_03145 SM00345 helix_turn_helix gluconate operon transcriptional repressor A3772_03145 SM00895 A3772_03145 A3772_03150 SM00257 Lysin motif A3772_03150 SM00636 A3772_03150 A3772_03165 SM00098 Alkaline phosphatase homologues A3772_03185 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. A3772_03220 SM00345 helix_turn_helix gluconate operon transcriptional repressor A3772_03220 SM00866 A3772_03220 A3772_03305 SM00382 ATPases associated with a variety of cellular activities A3772_03315 SM00881 CoA binding domain A3772_03340 SM00883 Chaperonin 10 Kd subunit A3772_03425 SM00028 Tetratricopeptide repeats A3772_03425 SM00382 ATPases associated with a variety of cellular activities A3772_03430 SM00829 Enoylreductase A3772_03475 SM00829 Enoylreductase A3772_03540 SM00460 Transglutaminase/protease-like homologues A3772_03575 SM01001 AIR carboxylase A3772_03585 SM00998 Adenylosuccinate lyase C-terminus A3772_03600 SM01211 A3772_03600 A3772_03625 SM00798 AICARFT/IMPCHase bienzyme A3772_03625 SM00851 MGS-like domain A3772_03630 SM01209 A3772_03630 A3772_03630 SM01210 A3772_03630 A3772_03635 SM00344 helix_turn_helix ASNC type A3772_03685 SM00278 Helix-hairpin-helix DNA-binding motif class 1 A3772_03685 SM00292 breast cancer carboxy-terminal domain A3772_03685 SM00532 Ligase N family A3772_03720 SM00845 GatB domain A3772_03735 SM00046 Diacylglycerol kinase catalytic domain (presumed) A3772_03760 SM00487 DEAD-like helicases superfamily A3772_03765 SM00974 A3772_03765 A3772_03795 SM00028 Tetratricopeptide repeats A3772_03860 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain A3772_03860 SM00387 Histidine kinase-like ATPases A3772_03865 SM00342 helix_turn_helix, arabinose operon control protein A3772_03865 SM00448 cheY-homologous receiver domain A3772_03890 SM00342 helix_turn_helix, arabinose operon control protein A3772_03995 SM00347 helix_turn_helix multiple antibiotic resistance protein A3772_04065 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). A3772_04070 SM00382 ATPases associated with a variety of cellular activities A3772_04080 SM00422 helix_turn_helix, mercury resistance A3772_04100 SM00382 ATPases associated with a variety of cellular activities A3772_04105 SM00487 DEAD-like helicases superfamily A3772_04105 SM00490 helicase superfamily c-terminal domain A3772_04115 SM00829 Enoylreductase A3772_04140 SM00382 ATPases associated with a variety of cellular activities A3772_04170 SM00656 A3772_04170 A3772_04180 SM00387 Histidine kinase-like ATPases A3772_04185 SM00448 cheY-homologous receiver domain A3772_04205 SM00849 Metallo-beta-lactamase superfamily A3772_04290 SM00642 Alpha-amylase domain A3772_04295 SM00345 helix_turn_helix gluconate operon transcriptional repressor A3772_04295 SM00866 A3772_04295 A3772_04325 SM00226 Low molecular weight phosphatase family A3772_04395 SM00478 endonuclease III A3772_04430 SM00861 Transketolase, pyrimidine binding domain A3772_04445 SM00382 ATPases associated with a variety of cellular activities A3772_04500 SM00382 ATPases associated with a variety of cellular activities A3772_04505 SM00382 ATPases associated with a variety of cellular activities A3772_04520 SM00342 helix_turn_helix, arabinose operon control protein A3772_04540 SM00387 Histidine kinase-like ATPases A3772_04545 SM00421 helix_turn_helix, Lux Regulon A3772_04545 SM00448 cheY-homologous receiver domain A3772_04550 SM00382 ATPases associated with a variety of cellular activities A3772_04600 SM00347 helix_turn_helix multiple antibiotic resistance protein A3772_04680 SM00287 Bacterial SH3 domain homologues A3772_04710 SM00478 endonuclease III A3772_04710 SM00525 A3772_04710 A3772_04740 SM00382 ATPases associated with a variety of cellular activities A3772_04910 SM01060 A3772_04910 A3772_04915 SM00382 ATPases associated with a variety of cellular activities A3772_04920 SM00062 Bacterial periplasmic substrate-binding proteins A3772_04950 SM00530 Helix-turn-helix XRE-family like proteins A3772_04965 SM00567 E-Z type HEAT repeats A3772_04995 SM00763 PrkA AAA domain A3772_05010 SM00347 helix_turn_helix multiple antibiotic resistance protein A3772_05040 SM00345 helix_turn_helix gluconate operon transcriptional repressor A3772_05045 SM00382 ATPases associated with a variety of cellular activities A3772_05050 SM00382 ATPases associated with a variety of cellular activities A3772_05060 SM00357 Cold shock protein domain A3772_05075 SM00267 diguanylate cyclase A3772_05105 SM00318 Staphylococcal nuclease homologues A3772_05115 SM00363 S4 RNA-binding domain A3772_05125 SM00116 Domain in cystathionine beta-synthase and other proteins. A3772_05170 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. A3772_05170 SM00387 Histidine kinase-like ATPases A3772_05175 SM00421 helix_turn_helix, Lux Regulon A3772_05175 SM00448 cheY-homologous receiver domain A3772_05195 SM00257 Lysin motif A3772_05215 SM00098 Alkaline phosphatase homologues A3772_05220 SM00257 Lysin motif A3772_05250 SM00345 helix_turn_helix gluconate operon transcriptional repressor A3772_05280 SM00563 Phosphate acyltransferases A3772_05285 SM01091 Transporter associated domain A3772_05290 SM00422 helix_turn_helix, mercury resistance A3772_05300 SM01091 Transporter associated domain A3772_05360 SM00382 ATPases associated with a variety of cellular activities A3772_05365 SM00382 ATPases associated with a variety of cellular activities A3772_05415 SM00729 Elongator protein 3, MiaB family, Radical SAM A3772_05445 SM00382 ATPases associated with a variety of cellular activities A3772_05465 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. A3772_05495 SM00347 helix_turn_helix multiple antibiotic resistance protein A3772_05525 SM00382 ATPases associated with a variety of cellular activities A3772_05610 SM01022 A3772_05610 A3772_05625 SM00849 Metallo-beta-lactamase superfamily A3772_05665 SM00829 Enoylreductase A3772_05675 SM00855 Phosphoglycerate mutase family A3772_05695 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). A3772_05710 SM00914 A3772_05710 A3772_05725 SM00894 Excalibur calcium-binding domain A3772_05760 SM00347 helix_turn_helix multiple antibiotic resistance protein A3772_05785 SM00354 helix_turn _helix lactose operon repressor A3772_05925 SM00342 helix_turn_helix, arabinose operon control protein A3772_05930 SM00354 helix_turn _helix lactose operon repressor A3772_05950 SM00345 helix_turn_helix gluconate operon transcriptional repressor A3772_05995 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain A3772_06025 SM00316 Ribosomal protein S1-like RNA-binding domain A3772_06035 SM00752 Horizontally Transferred TransMembrane Domain A3772_06120 SM00859 Semialdehyde dehydrogenase, NAD binding domain A3772_06140 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain A3772_06145 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain A3772_06195 SM00825 Beta-ketoacyl synthase A3772_06205 SM00382 ATPases associated with a variety of cellular activities A3772_06210 SM00382 ATPases associated with a variety of cellular activities A3772_06255 SM00382 ATPases associated with a variety of cellular activities A3772_06260 SM00382 ATPases associated with a variety of cellular activities A3772_06325 SM01118 A3772_06325 A3772_06335 SM00954 Region found in RelA / SpoT proteins A3772_06560 SM00635 Bacterial Ig-like domain 2 A3772_06655 SM00926 Molybdopterin oxidoreductase Fe4S4 domain A3772_06655 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region A3772_06705 SM00382 ATPases associated with a variety of cellular activities A3772_06715 SM00835 Cupin A3772_06745 SM00829 Enoylreductase A3772_06765 SM00354 helix_turn _helix lactose operon repressor A3772_06775 SM00858 A3772_06775 A3772_06790 SM00382 ATPases associated with a variety of cellular activities A3772_06795 SM00028 Tetratricopeptide repeats A3772_06810 SM00257 Lysin motif A3772_06810 SM00644 A3772_06810 A3772_06835 SM00530 Helix-turn-helix XRE-family like proteins A3772_06850 SM00382 ATPases associated with a variety of cellular activities A3772_06955 SM00257 Lysin motif A3772_07020 SM00257 Lysin motif A3772_07020 SM00644 A3772_07020 A3772_07070 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. A3772_07095 SM00382 ATPases associated with a variety of cellular activities A3772_07110 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain A3772_07120 SM00382 ATPases associated with a variety of cellular activities A3772_07180 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase A3772_07195 SM00347 helix_turn_helix multiple antibiotic resistance protein A3772_07235 SM00382 ATPases associated with a variety of cellular activities A3772_07250 SM00448 cheY-homologous receiver domain A3772_07250 SM00862 Transcriptional regulatory protein, C terminal A3772_07255 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain A3772_07255 SM00387 Histidine kinase-like ATPases A3772_07255 SM00388 His Kinase A (phosphoacceptor) domain A3772_07285 SM00116 Domain in cystathionine beta-synthase and other proteins. A3772_07285 SM00924 MgtE intracellular N domain A3772_07290 SM00422 helix_turn_helix, mercury resistance A3772_07305 SM00347 helix_turn_helix multiple antibiotic resistance protein A3772_07340 SM00559 Ku70 and Ku80 are 70kDa and 80kDa subunits of the Lupus Ku autoantigen A3772_07345 SM00052 Putative diguanylate phosphodiesterase A3772_07345 SM00267 diguanylate cyclase A3772_07405 SM00091 PAS domain A3772_07405 SM00387 Histidine kinase-like ATPases A3772_07405 SM00388 His Kinase A (phosphoacceptor) domain A3772_07450 SM01007 Class II Aldolase and Adducin N-terminal domain A3772_07475 SM00387 Histidine kinase-like ATPases A3772_07475 SM00388 His Kinase A (phosphoacceptor) domain A3772_07480 SM00347 helix_turn_helix multiple antibiotic resistance protein A3772_07495 SM00382 ATPases associated with a variety of cellular activities A3772_07495 SM01086 C-terminal, D2-small domain, of ClpB protein A3772_07530 SM00822 A3772_07530 A3772_07535 SM00257 Lysin motif A3772_07540 SM00257 Lysin motif A3772_07545 SM00636 A3772_07545 A3772_07610 SM00354 helix_turn _helix lactose operon repressor A3772_07615 SM01061 CAT RNA binding domain A3772_07650 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). A3772_07650 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain A3772_07670 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) A3772_07670 SM00091 PAS domain A3772_07670 SM00387 Histidine kinase-like ATPases A3772_07670 SM00388 His Kinase A (phosphoacceptor) domain A3772_07685 SM00260 Two component signalling adaptor domain A3772_07685 SM00448 cheY-homologous receiver domain A3772_07700 SM00257 Lysin motif A3772_07730 SM00052 Putative diguanylate phosphodiesterase A3772_07830 SM00852 Probable molybdopterin binding domain A3772_07850 SM00382 ATPases associated with a variety of cellular activities A3772_07855 SM00382 ATPases associated with a variety of cellular activities A3772_07870 SM00382 ATPases associated with a variety of cellular activities A3772_07875 SM01066 Carbohydrate binding domain A3772_07880 SM00420 helix_turn_helix, Deoxyribose operon repressor A3772_07880 SM01134 A3772_07880 A3772_07905 SM00382 ATPases associated with a variety of cellular activities A3772_07930 SM00966 SpoVT / AbrB like domain A3772_07935 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) A3772_07935 SM00091 PAS domain A3772_07935 SM00387 Histidine kinase-like ATPases A3772_07935 SM00388 His Kinase A (phosphoacceptor) domain A3772_07955 SM00849 Metallo-beta-lactamase superfamily A3772_07990 SM00861 Transketolase, pyrimidine binding domain A3772_08080 SM00838 Elongation factor G C-terminus A3772_08100 SM00670 Large family of predicted nucleotide-binding domains A3772_08125 SM00878 Biotin carboxylase C-terminal domain A3772_08170 SM00116 Domain in cystathionine beta-synthase and other proteins. A3772_08220 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. A3772_08280 SM00740 A3772_08280 A3772_08290 SM00740 A3772_08290 A3772_08355 SM00842 Cell division protein FtsA A3772_08360 SM00864 Tubulin/FtsZ family, GTPase domain A3772_08360 SM00865 Tubulin/FtsZ family, C-terminal domain A3772_08385 SM00382 ATPases associated with a variety of cellular activities A3772_08420 SM00363 S4 RNA-binding domain A3772_08445 SM00363 S4 RNA-binding domain A3772_08470 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain A3772_08475 SM00851 MGS-like domain A3772_08475 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain A3772_08475 SM01209 A3772_08475 A3772_08490 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family A3772_08540 SM00831 Cation transporter/ATPase, N-terminus A3772_08555 SM00072 Guanylate kinase homologues. A3772_08560 SM01409 A3772_08560 A3772_08570 SM00487 DEAD-like helicases superfamily A3772_08570 SM00490 helicase superfamily c-terminal domain A3772_08595 SM00331 Sigma factor PP2C-like phosphatases A3772_08595 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain A3772_08600 SM00220 Serine/Threonine protein kinases, catalytic domain A3772_08600 SM00740 A3772_08600 A3772_08615 SM00983 Thiamin pyrophosphokinase, vitamin B1 binding domain A3772_08635 SM01120 A3772_08635 A3772_08635 SM01121 A3772_08635 A3772_08650 SM00487 DEAD-like helicases superfamily A3772_08650 SM00490 helicase superfamily c-terminal domain A3772_08665 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. A3772_08670 SM00822 A3772_08670 A3772_08680 SM00358 Double-stranded RNA binding motif A3772_08680 SM00535 Ribonuclease III family A3772_08685 SM00968 SMC proteins Flexible Hinge Domain A3772_08690 SM00382 ATPases associated with a variety of cellular activities A3772_08690 SM00962 SRP54-type protein, GTPase domain A3772_08690 SM00963 SRP54-type protein, helical bundle domain A3772_08705 SM00382 ATPases associated with a variety of cellular activities A3772_08705 SM00962 SRP54-type protein, GTPase domain A3772_08705 SM00963 SRP54-type protein, helical bundle domain A3772_08765 SM00881 CoA binding domain A3772_08775 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain A3772_08775 SM00437 Bacterial DNA topoisomerase I DNA-binding domain A3772_08775 SM00493 A3772_08775 A3772_08795 SM00382 ATPases associated with a variety of cellular activities A3772_08795 SM01086 C-terminal, D2-small domain, of ClpB protein A3772_08835 SM00382 ATPases associated with a variety of cellular activities A3772_08885 SM00448 cheY-homologous receiver domain A3772_08920 SM00962 SRP54-type protein, GTPase domain A3772_08930 SM00448 cheY-homologous receiver domain A3772_08935 SM00073 Histidine Phosphotransfer domain A3772_08935 SM00260 Two component signalling adaptor domain A3772_08935 SM00387 Histidine kinase-like ATPases A3772_08935 SM01231 A3772_08935 A3772_08940 SM00260 Two component signalling adaptor domain A3772_09000 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. A3772_09010 SM00479 A3772_09010 A3772_09010 SM00481 DNA polymerase alpha chain like domain A3772_09020 SM00316 Ribosomal protein S1-like RNA-binding domain A3772_09020 SM00322 K homology RNA-binding domain A3772_09055 SM00904 Riboflavin kinase A3772_09060 SM01387 A3772_09060 A3772_09065 SM00316 Ribosomal protein S1-like RNA-binding domain A3772_09065 SM00322 K homology RNA-binding domain A3772_09100 SM00859 Semialdehyde dehydrogenase, NAD binding domain A3772_09110 SM01130 A3772_09110 A3772_09115 SM00849 Metallo-beta-lactamase superfamily A3772_09130 SM00382 ATPases associated with a variety of cellular activities A3772_09130 SM00843 A3772_09130 A3772_09135 SM00345 helix_turn_helix gluconate operon transcriptional repressor A3772_09135 SM00866 A3772_09135 A3772_09170 SM00530 Helix-turn-helix XRE-family like proteins A3772_09180 SM00852 Probable molybdopterin binding domain A3772_09185 SM00382 ATPases associated with a variety of cellular activities A3772_09195 SM00322 K homology RNA-binding domain A3772_09195 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. A3772_09210 SM00829 Enoylreductase A3772_09220 SM00729 Elongator protein 3, MiaB family, Radical SAM A3772_09235 SM00533 DNA-binding domain of DNA mismatch repair MUTS family A3772_09235 SM00534 ATPase domain of DNA mismatch repair MUTS family A3772_09240 SM00853 MutL C terminal dimerisation domain A3772_09240 SM01340 A3772_09240 A3772_09265 SM00849 Metallo-beta-lactamase superfamily A3772_09275 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. A3772_09280 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. A3772_09285 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. A3772_09295 SM00825 Beta-ketoacyl synthase A3772_09315 SM00822 A3772_09315 A3772_09315 SM00823 Phosphopantetheine attachment site A3772_09315 SM00825 Beta-ketoacyl synthase A3772_09315 SM00826 A3772_09315 A3772_09315 SM01294 A3772_09315 A3772_09320 SM00822 A3772_09320 A3772_09320 SM00823 Phosphopantetheine attachment site A3772_09320 SM00825 Beta-ketoacyl synthase A3772_09320 SM00826 A3772_09320 A3772_09320 SM01294 A3772_09320 A3772_09325 SM00822 A3772_09325 A3772_09325 SM00823 Phosphopantetheine attachment site A3772_09325 SM00825 Beta-ketoacyl synthase A3772_09325 SM00826 A3772_09325 A3772_09325 SM01294 A3772_09325 A3772_09330 SM00822 A3772_09330 A3772_09330 SM00823 Phosphopantetheine attachment site A3772_09330 SM00825 Beta-ketoacyl synthase A3772_09330 SM00826 A3772_09330 A3772_09330 SM01294 A3772_09330 A3772_09335 SM00823 Phosphopantetheine attachment site A3772_09335 SM00825 Beta-ketoacyl synthase A3772_09335 SM01294 A3772_09335 A3772_09350 SM00849 Metallo-beta-lactamase superfamily A3772_09435 SM00646 A3772_09435 A3772_09440 SM00382 ATPases associated with a variety of cellular activities A3772_09460 SM00422 helix_turn_helix, mercury resistance A3772_09465 SM01230 A3772_09465 A3772_09485 SM00860 SMI1 / KNR4 family A3772_09550 SM00318 Staphylococcal nuclease homologues A3772_09560 SM01005 Alanine racemase, C-terminal domain A3772_09695 SM00257 Lysin motif A3772_09700 SM00857 Resolvase, N terminal domain A3772_09710 SM00861 Transketolase, pyrimidine binding domain A3772_09735 SM00448 cheY-homologous receiver domain A3772_09805 SM01207 A3772_09805 A3772_09810 SM00881 CoA binding domain A3772_09815 SM00387 Histidine kinase-like ATPases A3772_09815 SM00433 TopoisomeraseII A3772_09820 SM00434 DNA Topoisomerase IV A3772_09840 SM01067 Cellulose binding domain A3772_09855 SM00606 Cellulose Binding Domain Type IV A3772_09905 SM00878 Biotin carboxylase C-terminal domain A3772_09940 SM00823 Phosphopantetheine attachment site A3772_09940 SM00824 Thioesterase A3772_09945 SM00823 Phosphopantetheine attachment site A3772_09950 SM00823 Phosphopantetheine attachment site A3772_09950 SM01294 A3772_09950 A3772_09955 SM00823 Phosphopantetheine attachment site A3772_09960 SM00823 Phosphopantetheine attachment site A3772_10010 SM00829 Enoylreductase A3772_10030 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase A3772_10045 SM00822 A3772_10045 A3772_10080 SM00926 Molybdopterin oxidoreductase Fe4S4 domain A3772_10105 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). A3772_10105 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain A3772_10125 SM00656 A3772_10125 A3772_10140 SM00835 Cupin A3772_10175 SM00530 Helix-turn-helix XRE-family like proteins A3772_10240 SM00530 Helix-turn-helix XRE-family like proteins A3772_10335 SM00860 SMI1 / KNR4 family A3772_10345 SM00860 SMI1 / KNR4 family A3772_10355 SM00710 Parallel beta-helix repeats A3772_10365 SM00342 helix_turn_helix, arabinose operon control protein A3772_10380 SM00849 Metallo-beta-lactamase superfamily A3772_10385 SM00871 Bacterial transcription activator, effector binding domain A3772_10400 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor A3772_10440 SM00421 helix_turn_helix, Lux Regulon A3772_10440 SM00448 cheY-homologous receiver domain A3772_10445 SM00257 Lysin motif A3772_10450 SM00341 Helicase and RNase D C-terminal A3772_10450 SM00487 DEAD-like helicases superfamily A3772_10450 SM00490 helicase superfamily c-terminal domain A3772_10450 SM00956 A3772_10450 A3772_10540 SM00861 Transketolase, pyrimidine binding domain A3772_10545 SM00327 von Willebrand factor (vWF) type A domain A3772_10550 SM00382 ATPases associated with a variety of cellular activities A3772_10560 SM00257 Lysin motif A3772_10655 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. A3772_10655 SM00245 tail specific protease A3772_10690 SM00014 Acid phosphatase homologues A3772_10740 SM00882 Coenzyme A transferase A3772_10745 SM00882 Coenzyme A transferase A3772_10810 SM00530 Helix-turn-helix XRE-family like proteins A3772_10890 SM00871 Bacterial transcription activator, effector binding domain A3772_10910 SM00507 HNH nucleases A3772_11070 SM00481 DNA polymerase alpha chain like domain A3772_11125 SM00710 Parallel beta-helix repeats A3772_11200 SM00507 HNH nucleases A3772_11290 SM00530 Helix-turn-helix XRE-family like proteins A3772_11310 SM00530 Helix-turn-helix XRE-family like proteins A3772_11415 SM00530 Helix-turn-helix XRE-family like proteins A3772_11430 SM00411 bacterial (prokaryotic) histone like domain A3772_11625 SM00644 A3772_11625 A3772_11655 SM00382 ATPases associated with a variety of cellular activities A3772_11705 SM00860 SMI1 / KNR4 family A3772_11710 SM00860 SMI1 / KNR4 family A3772_11720 SM00860 SMI1 / KNR4 family A3772_11730 SM00318 Staphylococcal nuclease homologues A3772_11730 SM00894 Excalibur calcium-binding domain A3772_11765 SM00857 Resolvase, N terminal domain A3772_11785 SM00347 helix_turn_helix multiple antibiotic resistance protein A3772_11830 SM00382 ATPases associated with a variety of cellular activities A3772_11880 SM00567 E-Z type HEAT repeats A3772_11880 SM00932 Scaffold protein Nfu/NifU N terminal A3772_11885 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. A3772_11905 SM00357 Cold shock protein domain A3772_11945 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs A3772_11945 SM00475 5'-3' exonuclease A3772_12010 SM00354 helix_turn _helix lactose operon repressor A3772_12025 SM00491 A3772_12025 A3772_12035 SM00981 A3772_12035 A3772_12065 SM00487 DEAD-like helicases superfamily A3772_12065 SM00490 helicase superfamily c-terminal domain A3772_12125 SM00478 endonuclease III A3772_12125 SM00525 A3772_12125 A3772_12155 SM00479 A3772_12155 A3772_12155 SM00487 DEAD-like helicases superfamily A3772_12155 SM00491 A3772_12155 A3772_12195 SM00851 MGS-like domain A3772_12245 SM00914 A3772_12245 A3772_12250 SM00028 Tetratricopeptide repeats A3772_12315 SM00138 Methyltransferase, chemotaxis proteins A3772_12325 SM00562 A3772_12325 A3772_12355 SM00411 bacterial (prokaryotic) histone like domain A3772_12405 SM01240 A3772_12405 A3772_12410 SM00316 Ribosomal protein S1-like RNA-binding domain A3772_12470 SM00257 Lysin motif A3772_12480 SM00487 DEAD-like helicases superfamily A3772_12480 SM00490 helicase superfamily c-terminal domain A3772_12520 SM00091 PAS domain A3772_12520 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain A3772_12520 SM00387 Histidine kinase-like ATPases A3772_12520 SM00388 His Kinase A (phosphoacceptor) domain A3772_12525 SM00448 cheY-homologous receiver domain A3772_12525 SM00862 Transcriptional regulatory protein, C terminal A3772_12545 SM00363 S4 RNA-binding domain A3772_12560 SM00936 Penicillin-binding protein 5, C-terminal domain A3772_12700 SM00387 Histidine kinase-like ATPases A3772_12710 SM00936 Penicillin-binding protein 5, C-terminal domain A3772_12750 SM00919 Malic enzyme, NAD binding domain A3772_12750 SM01274 A3772_12750 A3772_12765 SM00870 A3772_12765 A3772_12770 SM00530 Helix-turn-helix XRE-family like proteins A3772_12875 SM00849 Metallo-beta-lactamase superfamily A3772_12900 SM00849 Metallo-beta-lactamase superfamily A3772_12910 SM01350 A3772_12910 A3772_12965 SM00382 ATPases associated with a variety of cellular activities A3772_12975 SM00062 Bacterial periplasmic substrate-binding proteins A3772_12975 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. A3772_12985 SM00046 Diacylglycerol kinase catalytic domain (presumed) A3772_12995 SM00422 helix_turn_helix, mercury resistance A3772_13005 SM00861 Transketolase, pyrimidine binding domain A3772_13025 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase A3772_13035 SM00091 PAS domain A3772_13035 SM00382 ATPases associated with a variety of cellular activities A3772_13080 SM00646 A3772_13080 A3772_13105 SM00448 cheY-homologous receiver domain A3772_13115 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. A3772_13130 SM00363 S4 RNA-binding domain A3772_13135 SM00861 Transketolase, pyrimidine binding domain A3772_13170 SM00878 Biotin carboxylase C-terminal domain A3772_13215 SM00382 ATPases associated with a variety of cellular activities A3772_13225 SM00841 Elongation factor P, C-terminal A3772_13225 SM01185 A3772_13225 A3772_13260 SM00529 Helix-turn-helix diphteria tox regulatory element A3772_13270 SM00450 Rhodanese Homology Domain A3772_13290 SM00487 DEAD-like helicases superfamily A3772_13290 SM00490 helicase superfamily c-terminal domain A3772_13305 SM00530 Helix-turn-helix XRE-family like proteins A3772_13365 SM00382 ATPases associated with a variety of cellular activities A3772_13380 SM01091 Transporter associated domain A3772_13405 SM00849 Metallo-beta-lactamase superfamily A3772_13425 SM00631 A3772_13425 A3772_13445 SM00028 Tetratricopeptide repeats A3772_13485 SM00382 ATPases associated with a variety of cellular activities A3772_13490 SM00382 ATPases associated with a variety of cellular activities A3772_13540 SM00257 Lysin motif A3772_13575 SM00518 AP endonuclease family 2 A3772_13580 SM00487 DEAD-like helicases superfamily A3772_13580 SM00490 helicase superfamily c-terminal domain A3772_13615 SM00400 zinc finger A3772_13615 SM00493 A3772_13615 A3772_13630 SM00116 Domain in cystathionine beta-synthase and other proteins. A3772_13675 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. A3772_13730 SM00729 Elongator protein 3, MiaB family, Radical SAM A3772_13745 SM00271 DnaJ molecular chaperone homology domain A3772_13765 SM00729 Elongator protein 3, MiaB family, Radical SAM A3772_13770 SM00838 Elongation factor G C-terminus A3772_13805 SM00849 Metallo-beta-lactamase superfamily A3772_13815 SM00278 Helix-hairpin-helix DNA-binding motif class 1 A3772_13835 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. A3772_13845 SM01103 A3772_13845 A3772_13880 SM00644 A3772_13880 A3772_13890 SM01350 A3772_13890 A3772_13910 SM00857 Resolvase, N terminal domain A3772_13915 SM00226 Low molecular weight phosphatase family A3772_13930 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor A3772_13940 SM00028 Tetratricopeptide repeats A3772_13980 SM00644 A3772_13980 A3772_14040 SM00257 Lysin motif A3772_14175 SM00382 ATPases associated with a variety of cellular activities A3772_14205 SM00530 Helix-turn-helix XRE-family like proteins A3772_14215 SM00530 Helix-turn-helix XRE-family like proteins A3772_14220 SM00530 Helix-turn-helix XRE-family like proteins A3772_14255 SM00388 His Kinase A (phosphoacceptor) domain A3772_14260 SM00448 cheY-homologous receiver domain A3772_14260 SM00862 Transcriptional regulatory protein, C terminal A3772_14300 SM00450 Rhodanese Homology Domain A3772_14300 SM00849 Metallo-beta-lactamase superfamily A3772_14310 SM00450 Rhodanese Homology Domain A3772_14340 SM00422 helix_turn_helix, mercury resistance A3772_14355 SM01091 Transporter associated domain A3772_14415 SM00344 helix_turn_helix ASNC type A3772_14520 SM00287 Bacterial SH3 domain homologues A3772_14560 SM00422 helix_turn_helix, mercury resistance A3772_14570 SM00829 Enoylreductase A3772_14580 SM00640 Glycosyl hydrolases family 32 A3772_14605 SM00382 ATPases associated with a variety of cellular activities A3772_14675 SM00926 Molybdopterin oxidoreductase Fe4S4 domain A3772_14675 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region A3772_14705 SM00650 Ribosomal RNA adenine dimethylases A3772_14760 SM00732 Likely ribonuclease with RNase H fold. A3772_14770 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain A3772_14780 SM00382 ATPases associated with a variety of cellular activities A3772_14785 SM00062 Bacterial periplasmic substrate-binding proteins A3772_14785 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. A3772_14815 SM00382 ATPases associated with a variety of cellular activities A3772_14820 SM00028 Tetratricopeptide repeats A3772_14840 SM00382 ATPases associated with a variety of cellular activities A3772_14870 SM00287 Bacterial SH3 domain homologues A3772_14870 SM00646 A3772_14870 A3772_14880 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. A3772_14880 SM00954 Region found in RelA / SpoT proteins A3772_14930 SM01323 A3772_14930 A3772_14950 SM00382 ATPases associated with a variety of cellular activities A3772_14955 SM00278 Helix-hairpin-helix DNA-binding motif class 1 A3772_15010 SM00257 Lysin motif A3772_15055 SM01317 A3772_15055 A3772_15155 SM00257 Lysin motif A3772_15165 SM01004 Delta-aminolevulinic acid dehydratase A3772_15200 SM00382 ATPases associated with a variety of cellular activities A3772_15200 SM00464 Found in ATP-dependent protease La (LON) A3772_15205 SM00382 ATPases associated with a variety of cellular activities A3772_15210 SM00382 ATPases associated with a variety of cellular activities A3772_15210 SM00994 ClpX C4-type zinc finger A3772_15210 SM01086 C-terminal, D2-small domain, of ClpB protein A3772_15235 SM01329 A3772_15235 A3772_15240 SM00917 LeuA allosteric (dimerisation) domain A3772_15300 SM00909 Sporulation and spore germination A3772_15310 SM00347 helix_turn_helix multiple antibiotic resistance protein A3772_15315 SM00421 helix_turn_helix, Lux Regulon A3772_15355 SM00465 GIY-YIG type nucleases (URI domain) A3772_15365 SM00813 Alpha-L-arabinofuranosidase C-terminus A3772_15370 SM00893 Electron transfer flavoprotein domain A3772_15375 SM00893 Electron transfer flavoprotein domain A3772_15400 SM00463 Small MutS-related domain A3772_15400 SM00533 DNA-binding domain of DNA mismatch repair MUTS family A3772_15400 SM00534 ATPase domain of DNA mismatch repair MUTS family A3772_15405 SM00278 Helix-hairpin-helix DNA-binding motif class 1 A3772_15405 SM00481 DNA polymerase alpha chain like domain A3772_15405 SM00483 DNA polymerase X family A3772_15425 SM00873 B3/4 domain A3772_15425 SM00874 tRNA synthetase B5 domain A3772_15425 SM00896 Ferredoxin-fold anticodon binding domain A3772_15440 SM00967 RNA 2'-O ribose methyltransferase substrate binding A3772_15480 SM00813 Alpha-L-arabinofuranosidase C-terminus A3772_15510 SM01007 Class II Aldolase and Adducin N-terminal domain A3772_15575 SM00448 cheY-homologous receiver domain A3772_15575 SM00850 LytTr DNA-binding domain A3772_15580 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. A3772_15580 SM00387 Histidine kinase-like ATPases A3772_15590 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain A3772_15605 SM00382 ATPases associated with a variety of cellular activities A3772_15625 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain A3772_15660 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain A3772_15660 SM01232 A3772_15660 A3772_15665 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs A3772_15665 SM00474 3'-5' exonuclease A3772_15665 SM00475 5'-3' exonuclease A3772_15665 SM00482 DNA polymerase A domain A3772_15670 SM00091 PAS domain A3772_15670 SM00387 Histidine kinase-like ATPases A3772_15670 SM00388 His Kinase A (phosphoacceptor) domain A3772_15675 SM00448 cheY-homologous receiver domain A3772_15675 SM00862 Transcriptional regulatory protein, C terminal A3772_15685 SM01329 A3772_15685 A3772_15730 SM00919 Malic enzyme, NAD binding domain A3772_15730 SM01274 A3772_15730 A3772_15735 SM00481 DNA polymerase alpha chain like domain A3772_15765 SM00116 Domain in cystathionine beta-synthase and other proteins. A3772_15785 SM00904 Riboflavin kinase A3772_15805 SM00382 ATPases associated with a variety of cellular activities A3772_15820 SM00062 Bacterial periplasmic substrate-binding proteins A3772_15825 SM00062 Bacterial periplasmic substrate-binding proteins A3772_15840 SM00849 Metallo-beta-lactamase superfamily A3772_15865 SM00852 Probable molybdopterin binding domain A3772_15925 SM00981 A3772_15925 A3772_15955 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. A3772_15960 SM00267 diguanylate cyclase A3772_15965 SM00363 S4 RNA-binding domain A3772_15965 SM01390 A3772_15965 A3772_15975 SM00363 S4 RNA-binding domain A3772_15990 SM00116 Domain in cystathionine beta-synthase and other proteins. A3772_16010 SM00354 helix_turn _helix lactose operon repressor A3772_16015 SM00830 Chorismate mutase type II A3772_16040 SM00382 ATPases associated with a variety of cellular activities A3772_16040 SM00843 A3772_16040 A3772_16075 SM00919 Malic enzyme, NAD binding domain A3772_16075 SM01274 A3772_16075 A3772_16080 SM00849 Metallo-beta-lactamase superfamily A3772_16100 SM00642 Alpha-amylase domain A3772_16105 SM00046 Diacylglycerol kinase catalytic domain (presumed) A3772_16140 SM00382 ATPases associated with a variety of cellular activities A3772_16145 SM00420 helix_turn_helix, Deoxyribose operon repressor A3772_16150 SM00363 S4 RNA-binding domain A3772_16200 SM00342 helix_turn_helix, arabinose operon control protein A3772_16225 SM00729 Elongator protein 3, MiaB family, Radical SAM A3772_16225 SM00876 Biotin and Thiamin Synthesis associated domain A3772_16255 SM00354 helix_turn _helix lactose operon repressor A3772_16280 SM00450 Rhodanese Homology Domain A3772_16295 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) A3772_16295 SM00091 PAS domain A3772_16315 SM00382 ATPases associated with a variety of cellular activities A3772_16320 SM00387 Histidine kinase-like ATPases A3772_16325 SM00448 cheY-homologous receiver domain A3772_16325 SM00862 Transcriptional regulatory protein, C terminal A3772_16335 SM00382 ATPases associated with a variety of cellular activities A3772_16350 SM00382 ATPases associated with a variety of cellular activities A3772_16355 SM00345 helix_turn_helix gluconate operon transcriptional repressor A3772_16370 SM00729 Elongator protein 3, MiaB family, Radical SAM A3772_16430 SM00382 ATPases associated with a variety of cellular activities A3772_16470 SM01234 A3772_16470 A3772_16475 SM00947 Carbonic anhydrase A3772_16510 SM00382 ATPases associated with a variety of cellular activities A3772_16520 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain A3772_16560 SM00984 UDP binding domain A3772_16620 SM00642 Alpha-amylase domain A3772_16760 SM00244 prohibitin homologues A3772_16815 SM00047 Lysozyme subfamily 2 A3772_16865 SM00420 helix_turn_helix, Deoxyribose operon repressor A3772_16865 SM01134 A3772_16865 A3772_16870 SM01007 Class II Aldolase and Adducin N-terminal domain A3772_16875 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). A3772_16875 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain A3772_16875 SM00319 Homologues of the ligand binding domain of Tar A3772_16880 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). A3772_16880 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain A3772_16880 SM00319 Homologues of the ligand binding domain of Tar A3772_16885 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). A3772_16885 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain A3772_16885 SM00319 Homologues of the ligand binding domain of Tar A3772_16890 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). A3772_16890 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain A3772_16890 SM00319 Homologues of the ligand binding domain of Tar A3772_16910 SM00642 Alpha-amylase domain A3772_16915 SM01091 Transporter associated domain A3772_16970 SM00316 Ribosomal protein S1-like RNA-binding domain A3772_16980 SM00344 helix_turn_helix ASNC type A3772_17000 SM00387 Histidine kinase-like ATPases A3772_17000 SM00388 His Kinase A (phosphoacceptor) domain A3772_17005 SM01298 A3772_17005 A3772_17010 SM00479 A3772_17010 A3772_17040 SM00091 PAS domain A3772_17040 SM00387 Histidine kinase-like ATPases A3772_17045 SM00448 cheY-homologous receiver domain A3772_17055 SM00382 ATPases associated with a variety of cellular activities A3772_17120 SM00421 helix_turn_helix, Lux Regulon A3772_17120 SM00448 cheY-homologous receiver domain A3772_17125 SM00387 Histidine kinase-like ATPases A3772_17150 SM00052 Putative diguanylate phosphodiesterase A3772_17195 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. A3772_17240 SM01002 Alanine dehydrogenase/PNT, C-terminal domain A3772_17240 SM01003 Alanine dehydrogenase/PNT, N-terminal domain A3772_17250 SM00923 MbtH-like protein A3772_17255 SM00823 Phosphopantetheine attachment site A3772_17255 SM00824 Thioesterase A3772_17340 SM01240 A3772_17340 A3772_17440 SM00729 Elongator protein 3, MiaB family, Radical SAM A3772_17520 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain A3772_17560 SM00382 ATPases associated with a variety of cellular activities A3772_17565 SM00345 helix_turn_helix gluconate operon transcriptional repressor A3772_17565 SM00866 A3772_17565 A3772_17595 SM00465 GIY-YIG type nucleases (URI domain) A3772_17620 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor A3772_17645 SM00382 ATPases associated with a variety of cellular activities A3772_17670 SM00382 ATPases associated with a variety of cellular activities A3772_17670 SM00930 A3772_17670 A3772_17685 SM00493 A3772_17685 A3772_17740 SM00347 helix_turn_helix multiple antibiotic resistance protein A3772_17775 SM00382 ATPases associated with a variety of cellular activities A3772_17805 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. A3772_17810 SM00448 cheY-homologous receiver domain A3772_17810 SM00862 Transcriptional regulatory protein, C terminal A3772_17815 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain A3772_17815 SM00387 Histidine kinase-like ATPases A3772_17815 SM00388 His Kinase A (phosphoacceptor) domain A3772_17855 SM00421 helix_turn_helix, Lux Regulon A3772_17855 SM00448 cheY-homologous receiver domain A3772_17860 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain A3772_17860 SM00387 Histidine kinase-like ATPases A3772_17895 SM00382 ATPases associated with a variety of cellular activities A3772_17920 SM00387 Histidine kinase-like ATPases A3772_17920 SM00388 His Kinase A (phosphoacceptor) domain A3772_17925 SM00448 cheY-homologous receiver domain A3772_17925 SM00862 Transcriptional regulatory protein, C terminal A3772_17945 SM00835 Cupin A3772_17960 SM00382 ATPases associated with a variety of cellular activities A3772_17970 SM00382 ATPases associated with a variety of cellular activities A3772_18140 SM00316 Ribosomal protein S1-like RNA-binding domain A3772_18140 SM00357 Cold shock protein domain A3772_18140 SM00955 A3772_18140 A3772_18160 SM00530 Helix-turn-helix XRE-family like proteins A3772_18165 SM00530 Helix-turn-helix XRE-family like proteins A3772_18170 SM00530 Helix-turn-helix XRE-family like proteins A3772_18180 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). A3772_18180 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain A3772_18200 SM00116 Domain in cystathionine beta-synthase and other proteins. A3772_18200 SM00382 ATPases associated with a variety of cellular activities A3772_18215 SM00752 Horizontally Transferred TransMembrane Domain A3772_18230 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor A3772_18250 SM00116 Domain in cystathionine beta-synthase and other proteins. A3772_18250 SM00382 ATPases associated with a variety of cellular activities A3772_18285 SM01192 A3772_18285 A3772_18285 SM01193 A3772_18285 A3772_18310 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain A3772_18325 SM00345 helix_turn_helix gluconate operon transcriptional repressor A3772_18350 SM00636 A3772_18350 A3772_18370 SM00421 helix_turn_helix, Lux Regulon A3772_18370 SM00448 cheY-homologous receiver domain A3772_18385 SM00382 ATPases associated with a variety of cellular activities A3772_18395 SM00331 Sigma factor PP2C-like phosphatases A3772_18425 SM00354 helix_turn _helix lactose operon repressor A3772_18430 SM00345 helix_turn_helix gluconate operon transcriptional repressor A3772_18430 SM00895 A3772_18430 A3772_18525 SM00530 Helix-turn-helix XRE-family like proteins A3772_18565 SM00640 Glycosyl hydrolases family 32 A3772_18620 SM00642 Alpha-amylase domain A3772_18650 SM00642 Alpha-amylase domain A3772_18655 SM00354 helix_turn _helix lactose operon repressor A3772_18675 SM00947 Carbonic anhydrase A3772_18690 SM00382 ATPases associated with a variety of cellular activities A3772_18695 SM00387 Histidine kinase-like ATPases A3772_18700 SM00448 cheY-homologous receiver domain A3772_18700 SM00862 Transcriptional regulatory protein, C terminal A3772_18750 SM00028 Tetratricopeptide repeats A3772_18755 SM00382 ATPases associated with a variety of cellular activities A3772_18860 SM00345 helix_turn_helix gluconate operon transcriptional repressor A3772_18860 SM00866 A3772_18860 A3772_18870 SM00347 helix_turn_helix multiple antibiotic resistance protein A3772_18885 SM00347 helix_turn_helix multiple antibiotic resistance protein A3772_18925 SM00382 ATPases associated with a variety of cellular activities A3772_18930 SM00487 DEAD-like helicases superfamily A3772_18930 SM00490 helicase superfamily c-terminal domain A3772_18955 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. A3772_18965 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. A3772_18965 SM00245 tail specific protease A3772_18975 SM00382 ATPases associated with a variety of cellular activities A3772_18990 SM00937 A3772_18990 A3772_18995 SM00957 SecA DEAD-like domain A3772_18995 SM00958 SecA preprotein cross-linking domain A3772_19085 SM00487 DEAD-like helicases superfamily A3772_19085 SM00490 helicase superfamily c-terminal domain A3772_19095 SM00421 helix_turn_helix, Lux Regulon A3772_19095 SM00448 cheY-homologous receiver domain A3772_19100 SM00387 Histidine kinase-like ATPases A3772_19140 SM00984 UDP binding domain A3772_19165 SM00646 A3772_19165 A3772_19215 SM00382 ATPases associated with a variety of cellular activities A3772_19255 SM00047 Lysozyme subfamily 2 A3772_19255 SM00287 Bacterial SH3 domain homologues A3772_19310 SM00854 Bacterial capsule synthesis protein PGA_cap A3772_19325 SM00354 helix_turn _helix lactose operon repressor A3772_19340 SM00382 ATPases associated with a variety of cellular activities A3772_19355 SM00287 Bacterial SH3 domain homologues A3772_19410 SM00903 Flavin reductase like domain A3772_19425 SM00344 helix_turn_helix ASNC type A3772_19485 SM00984 UDP binding domain A3772_19515 SM00487 DEAD-like helicases superfamily A3772_19515 SM00490 helicase superfamily c-terminal domain A3772_19525 SM00420 helix_turn_helix, Deoxyribose operon repressor A3772_19525 SM01134 A3772_19525 A3772_19550 SM00387 Histidine kinase-like ATPases A3772_19565 SM00028 Tetratricopeptide repeats A3772_19590 SM00347 helix_turn_helix multiple antibiotic resistance protein A3772_19600 SM00710 Parallel beta-helix repeats A3772_19600 SM00722 Domain present in carbohydrate binding proteins and sugar hydrolses A3772_19630 SM00938 Nitrogen regulatory protein P-II A3772_19635 SM00014 Acid phosphatase homologues A3772_19670 SM00155 Phospholipase D. Active site motifs. A3772_19675 SM00422 helix_turn_helix, mercury resistance A3772_19725 SM00028 Tetratricopeptide repeats A3772_19730 SM00729 Elongator protein 3, MiaB family, Radical SAM A3772_19745 SM00327 von Willebrand factor (vWF) type A domain A3772_19755 SM00327 von Willebrand factor (vWF) type A domain A3772_19790 SM00382 ATPases associated with a variety of cellular activities A3772_19855 SM00226 Low molecular weight phosphatase family A3772_19895 SM00937 A3772_19895 A3772_19915 SM00919 Malic enzyme, NAD binding domain A3772_19915 SM01274 A3772_19915 A3772_19930 SM00357 Cold shock protein domain A3772_19930 SM00382 ATPases associated with a variety of cellular activities A3772_19930 SM00959 Rho termination factor, N-terminal domain A3772_19960 SM00448 cheY-homologous receiver domain A3772_19990 SM00155 Phospholipase D. Active site motifs. A3772_20010 SM00382 ATPases associated with a variety of cellular activities A3772_20015 SM00155 Phospholipase D. Active site motifs. A3772_20040 SM00926 Molybdopterin oxidoreductase Fe4S4 domain A3772_20055 SM00100 Cyclic nucleotide-monophosphate binding domain A3772_20055 SM00419 helix_turn_helix, cAMP Regulatory protein A3772_20065 SM00836 DALR anticodon binding domain A3772_20065 SM01016 Arginyl tRNA synthetase N terminal dom A3772_20080 SM00729 Elongator protein 3, MiaB family, Radical SAM A3772_20130 SM00028 Tetratricopeptide repeats A3772_20175 SM00347 helix_turn_helix multiple antibiotic resistance protein A3772_20180 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain A3772_20205 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. A3772_20300 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase A3772_20340 SM00858 A3772_20340 A3772_20395 SM00986 Uracil DNA glycosylase superfamily A3772_20395 SM00987 UreE urease accessory protein, C-terminal domain A3772_20430 SM00640 Glycosyl hydrolases family 32 A3772_20445 SM01061 CAT RNA binding domain A3772_20595 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase A3772_20625 SM01061 CAT RNA binding domain A3772_20640 SM00347 helix_turn_helix multiple antibiotic resistance protein A3772_20645 SM00363 S4 RNA-binding domain A3772_20655 SM00954 Region found in RelA / SpoT proteins A3772_20740 SM01060 A3772_20740 A3772_20755 SM00382 ATPases associated with a variety of cellular activities A3772_20790 SM00382 ATPases associated with a variety of cellular activities A3772_20795 SM00382 ATPases associated with a variety of cellular activities A3772_20830 SM00382 ATPases associated with a variety of cellular activities A3772_20880 SM00421 helix_turn_helix, Lux Regulon A3772_20880 SM00448 cheY-homologous receiver domain A3772_20915 SM00822 A3772_20915 A3772_20920 SM00882 Coenzyme A transferase A3772_20925 SM00882 Coenzyme A transferase A3772_20965 SM01060 A3772_20965 A3772_20980 SM01061 CAT RNA binding domain A3772_20995 SM00487 DEAD-like helicases superfamily A3772_20995 SM00490 helicase superfamily c-terminal domain A3772_21085 SM00860 SMI1 / KNR4 family A3772_21145 SM00941 Pyrimidine nucleoside phosphorylase C-terminal domain A3772_21155 SM01133 A3772_21155 A3772_21185 SM00382 ATPases associated with a variety of cellular activities A3772_21195 SM00062 Bacterial periplasmic substrate-binding proteins A3772_21265 SM00382 ATPases associated with a variety of cellular activities A3772_21270 SM00387 Histidine kinase-like ATPases A3772_21275 SM00448 cheY-homologous receiver domain A3772_21275 SM00862 Transcriptional regulatory protein, C terminal A3772_21330 SM00420 helix_turn_helix, Deoxyribose operon repressor A3772_21330 SM01134 A3772_21330 A3772_21355 SM00387 Histidine kinase-like ATPases A3772_21385 SM00558 A domain family that is part of the cupin metalloenzyme superfamily. A3772_21415 SM00564 beta-propeller repeat A3772_21450 SM00347 helix_turn_helix multiple antibiotic resistance protein A3772_21475 SM00345 helix_turn_helix gluconate operon transcriptional repressor A3772_21475 SM00895 A3772_21475 A3772_21490 SM01350 A3772_21490 A3772_21515 SM00345 helix_turn_helix gluconate operon transcriptional repressor A3772_21515 SM00866 A3772_21515 A3772_21530 SM00382 ATPases associated with a variety of cellular activities A3772_21635 SM00091 PAS domain A3772_21635 SM00382 ATPases associated with a variety of cellular activities A3772_21650 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. A3772_21655 SM00849 Metallo-beta-lactamase superfamily A3772_21670 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) A3772_21670 SM00091 PAS domain A3772_21670 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain A3772_21670 SM00387 Histidine kinase-like ATPases A3772_21670 SM00388 His Kinase A (phosphoacceptor) domain A3772_21675 SM00448 cheY-homologous receiver domain A3772_21675 SM00862 Transcriptional regulatory protein, C terminal A3772_21700 SM00788 Adenylosuccinate synthetase A3772_21710 SM00382 ATPases associated with a variety of cellular activities A3772_21750 SM00267 diguanylate cyclase A3772_21775 SM01131 A3772_21775 A3772_21830 SM00382 ATPases associated with a variety of cellular activities A3772_21870 SM00849 Metallo-beta-lactamase superfamily A3772_21875 SM00347 helix_turn_helix multiple antibiotic resistance protein A3772_21915 SM00422 helix_turn_helix, mercury resistance A3772_21940 SM01266 A3772_21940 A3772_21950 SM00354 helix_turn _helix lactose operon repressor A3772_21980 SM00926 Molybdopterin oxidoreductase Fe4S4 domain A3772_22000 SM00470 ParB-like nuclease domain A3772_22015 SM00470 ParB-like nuclease domain A3772_22025 SM01228 A3772_22025 A3772_22035 SM00322 K homology RNA-binding domain A3772_22035 SM00393 Putative single-stranded nucleic acids-binding domain A3772_22035 SM01245 A3772_22035