M036_00005 SM00382 ATPases associated with a variety of cellular activities M036_00005 SM00760 Bacterial dnaA protein helix-turn-helix domain M036_00010 SM00480 DNA polymerase III beta subunit M036_00030 SM00387 Histidine kinase-like ATPases M036_00030 SM00433 TopoisomeraseII M036_00035 SM00434 DNA Topoisomerase IV M036_00070 SM00116 Domain in cystathionine beta-synthase and other proteins. M036_00070 SM01240 M036_00070 M036_00075 SM00936 Penicillin-binding protein 5, C-terminal domain M036_00110 SM00257 Lysin motif M036_00110 SM00636 M036_00110 M036_00125 SM00382 ATPases associated with a variety of cellular activities M036_00135 SM00493 M036_00135 M036_00220 SM00465 GIY-YIG type nucleases (URI domain) M036_00230 SM00966 SpoVT / AbrB like domain M036_00245 SM01208 M036_00245 M036_00250 SM00493 M036_00250 M036_00255 SM00650 Ribosomal RNA adenine dimethylases M036_00305 SM01400 M036_00305 M036_00325 SM00487 DEAD-like helicases superfamily M036_00325 SM00490 helicase superfamily c-terminal domain M036_00325 SM00982 M036_00325 M036_00325 SM01058 CarD-like/TRCF domain M036_00330 SM00966 SpoVT / AbrB like domain M036_00345 SM00363 S4 RNA-binding domain M036_00365 SM00316 Ribosomal protein S1-like RNA-binding domain M036_00380 SM00331 Sigma factor PP2C-like phosphatases M036_00380 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain M036_00390 SM00220 Serine/Threonine protein kinases, catalytic domain M036_00395 SM00977 TilS substrate C-terminal domain M036_00405 SM00382 ATPases associated with a variety of cellular activities M036_00450 SM00905 Dihydroneopterin aldolase M036_00460 SM00530 Helix-turn-helix XRE-family like proteins M036_00505 SM00382 ATPases associated with a variety of cellular activities M036_00505 SM01086 C-terminal, D2-small domain, of ClpB protein M036_00510 SM00382 ATPases associated with a variety of cellular activities M036_00520 SM00670 Large family of predicted nucleotide-binding domains M036_00550 SM00840 M036_00550 M036_00555 SM00535 Ribonuclease III family M036_00560 SM00967 RNA 2'-O ribose methyltransferase substrate binding M036_00585 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. M036_00585 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. M036_00590 SM00649 Ribosomal protein L11/L12 M036_00620 SM00663 RNA polymerase I subunit A N-terminus M036_00640 SM00838 Elongation factor G C-terminus M036_00640 SM00889 Elongation factor G, domain IV M036_00655 SM01403 M036_00655 M036_00675 SM01382 M036_00675 M036_00675 SM01383 M036_00675 M036_00690 SM00322 K homology RNA-binding domain M036_00710 SM01374 M036_00710 M036_00715 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. M036_00780 SM00316 Ribosomal protein S1-like RNA-binding domain M036_00800 SM00662 RNA polymerases D M036_00810 SM00382 ATPases associated with a variety of cellular activities M036_00815 SM00382 ATPases associated with a variety of cellular activities M036_00850 SM00646 M036_00850 M036_00870 SM01251 M036_00870 M036_00935 SM00342 helix_turn_helix, arabinose operon control protein M036_01035 SM00478 endonuclease III M036_01040 SM00342 helix_turn_helix, arabinose operon control protein M036_01075 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor M036_01090 SM00729 Elongator protein 3, MiaB family, Radical SAM M036_01100 SM00382 ATPases associated with a variety of cellular activities M036_01130 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain M036_01130 SM00388 His Kinase A (phosphoacceptor) domain M036_01205 SM00347 helix_turn_helix multiple antibiotic resistance protein M036_01235 SM00342 helix_turn_helix, arabinose operon control protein M036_01285 SM00342 helix_turn_helix, arabinose operon control protein M036_01290 SM00450 Rhodanese Homology Domain M036_01310 SM00345 helix_turn_helix gluconate operon transcriptional repressor M036_01310 SM00866 M036_01310 M036_01350 SM00387 Histidine kinase-like ATPases M036_01355 SM00448 cheY-homologous receiver domain M036_01360 SM01130 M036_01360 M036_01375 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain M036_01380 SM00345 helix_turn_helix gluconate operon transcriptional repressor M036_01380 SM00895 M036_01380 M036_01385 SM00858 M036_01385 M036_01405 SM00448 cheY-homologous receiver domain M036_01405 SM00862 Transcriptional regulatory protein, C terminal M036_01410 SM00387 Histidine kinase-like ATPases M036_01410 SM00388 His Kinase A (phosphoacceptor) domain M036_01415 SM00382 ATPases associated with a variety of cellular activities M036_01440 SM00327 von Willebrand factor (vWF) type A domain M036_01485 SM00870 M036_01485 M036_01505 SM00387 Histidine kinase-like ATPases M036_01510 SM00448 cheY-homologous receiver domain M036_01510 SM00850 LytTr DNA-binding domain M036_01515 SM00382 ATPases associated with a variety of cellular activities M036_01550 SM00028 Tetratricopeptide repeats M036_01560 SM00642 Alpha-amylase domain M036_01570 SM00382 ATPases associated with a variety of cellular activities M036_01625 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor M036_01630 SM00116 Domain in cystathionine beta-synthase and other proteins. M036_01630 SM00382 ATPases associated with a variety of cellular activities M036_01660 SM00632 M036_01660 M036_01660 SM00642 Alpha-amylase domain M036_01680 SM00347 helix_turn_helix multiple antibiotic resistance protein M036_01795 SM00926 Molybdopterin oxidoreductase Fe4S4 domain M036_01820 SM00833 Cobalamin synthesis protein cobW C-terminal domain M036_01830 SM00062 Bacterial periplasmic substrate-binding proteins M036_01865 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). M036_01865 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain M036_01875 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family M036_01890 SM00823 Phosphopantetheine attachment site M036_01890 SM01294 M036_01890 M036_01895 SM00823 Phosphopantetheine attachment site M036_01895 SM01294 M036_01895 M036_01900 SM00823 Phosphopantetheine attachment site M036_01925 SM00345 helix_turn_helix gluconate operon transcriptional repressor M036_01940 SM00382 ATPases associated with a variety of cellular activities M036_01950 SM00062 Bacterial periplasmic substrate-binding proteins M036_01990 SM00710 Parallel beta-helix repeats M036_01990 SM00722 Domain present in carbohydrate binding proteins and sugar hydrolses M036_02015 SM00382 ATPases associated with a variety of cellular activities M036_02025 SM00448 cheY-homologous receiver domain M036_02025 SM00862 Transcriptional regulatory protein, C terminal M036_02030 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain M036_02030 SM00387 Histidine kinase-like ATPases M036_02030 SM00388 His Kinase A (phosphoacceptor) domain M036_02035 SM00028 Tetratricopeptide repeats M036_02070 SM00382 ATPases associated with a variety of cellular activities M036_02100 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor M036_02105 SM00345 helix_turn_helix gluconate operon transcriptional repressor M036_02140 SM00420 helix_turn_helix, Deoxyribose operon repressor M036_02165 SM01329 M036_02165 M036_02210 SM00796 Allophanate hydrolase subunit 1 M036_02215 SM00797 Allophanate hydrolase subunit 2 M036_02220 SM00346 helix_turn_helix isocitrate lyase regulation M036_02295 SM00344 helix_turn_helix ASNC type M036_02300 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain M036_02300 SM00437 Bacterial DNA topoisomerase I DNA-binding domain M036_02300 SM00493 M036_02300 M036_02310 SM00267 diguanylate cyclase M036_02400 SM00091 PAS domain M036_02400 SM00387 Histidine kinase-like ATPases M036_02405 SM00448 cheY-homologous receiver domain M036_02425 SM00382 ATPases associated with a variety of cellular activities M036_02475 SM00487 DEAD-like helicases superfamily M036_02475 SM00490 helicase superfamily c-terminal domain M036_02505 SM01005 Alanine racemase, C-terminal domain M036_02530 SM00387 Histidine kinase-like ATPases M036_02535 SM00331 Sigma factor PP2C-like phosphatases M036_02555 SM00331 Sigma factor PP2C-like phosphatases M036_02555 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain M036_02575 SM00347 helix_turn_helix multiple antibiotic resistance protein M036_02580 SM00316 Ribosomal protein S1-like RNA-binding domain M036_02580 SM00732 Likely ribonuclease with RNase H fold. M036_02590 SM00731 SprT homologues. M036_02635 SM00344 helix_turn_helix ASNC type M036_02640 SM00344 helix_turn_helix ASNC type M036_02680 SM00357 Cold shock protein domain M036_02685 SM01058 CarD-like/TRCF domain M036_02695 SM00342 helix_turn_helix, arabinose operon control protein M036_02705 SM00342 helix_turn_helix, arabinose operon control protein M036_02705 SM00871 Bacterial transcription activator, effector binding domain M036_02710 SM00345 helix_turn_helix gluconate operon transcriptional repressor M036_02740 SM00345 helix_turn_helix gluconate operon transcriptional repressor M036_02785 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor M036_02805 SM00345 helix_turn_helix gluconate operon transcriptional repressor M036_02815 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor M036_02835 SM00387 Histidine kinase-like ATPases M036_02840 SM00421 helix_turn_helix, Lux Regulon M036_02840 SM00448 cheY-homologous receiver domain M036_02860 SM00422 helix_turn_helix, mercury resistance M036_02860 SM00871 Bacterial transcription activator, effector binding domain M036_02950 SM00382 ATPases associated with a variety of cellular activities M036_02965 SM00347 helix_turn_helix multiple antibiotic resistance protein M036_02980 SM00347 helix_turn_helix multiple antibiotic resistance protein M036_02980 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor M036_02995 SM00345 helix_turn_helix gluconate operon transcriptional repressor M036_02995 SM00895 M036_02995 M036_03000 SM00257 Lysin motif M036_03000 SM00636 M036_03000 M036_03015 SM00098 Alkaline phosphatase homologues M036_03035 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. M036_03070 SM00345 helix_turn_helix gluconate operon transcriptional repressor M036_03070 SM00866 M036_03070 M036_03155 SM00382 ATPases associated with a variety of cellular activities M036_03165 SM00881 CoA binding domain M036_03190 SM00883 Chaperonin 10 Kd subunit M036_03245 SM00028 Tetratricopeptide repeats M036_03245 SM00382 ATPases associated with a variety of cellular activities M036_03250 SM00829 Enoylreductase M036_03295 SM00829 Enoylreductase M036_03355 SM00460 Transglutaminase/protease-like homologues M036_03395 SM01001 AIR carboxylase M036_03405 SM00998 Adenylosuccinate lyase C-terminus M036_03420 SM01211 M036_03420 M036_03445 SM00798 AICARFT/IMPCHase bienzyme M036_03445 SM00851 MGS-like domain M036_03450 SM01209 M036_03450 M036_03450 SM01210 M036_03450 M036_03455 SM00344 helix_turn_helix ASNC type M036_03505 SM00278 Helix-hairpin-helix DNA-binding motif class 1 M036_03505 SM00292 breast cancer carboxy-terminal domain M036_03505 SM00532 Ligase N family M036_03540 SM00845 GatB domain M036_03555 SM00046 Diacylglycerol kinase catalytic domain (presumed) M036_03580 SM00487 DEAD-like helicases superfamily M036_03585 SM00974 M036_03585 M036_03630 SM00028 Tetratricopeptide repeats M036_03700 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain M036_03700 SM00387 Histidine kinase-like ATPases M036_03705 SM00342 helix_turn_helix, arabinose operon control protein M036_03705 SM00448 cheY-homologous receiver domain M036_03800 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). M036_03805 SM00382 ATPases associated with a variety of cellular activities M036_03815 SM00422 helix_turn_helix, mercury resistance M036_03825 SM00382 ATPases associated with a variety of cellular activities M036_03835 SM00487 DEAD-like helicases superfamily M036_03835 SM00490 helicase superfamily c-terminal domain M036_03845 SM00829 Enoylreductase M036_03865 SM00382 ATPases associated with a variety of cellular activities M036_03895 SM00656 M036_03895 M036_03905 SM00387 Histidine kinase-like ATPases M036_03910 SM00448 cheY-homologous receiver domain M036_03930 SM00849 Metallo-beta-lactamase superfamily M036_04015 SM00642 Alpha-amylase domain M036_04020 SM00345 helix_turn_helix gluconate operon transcriptional repressor M036_04020 SM00866 M036_04020 M036_04050 SM00226 Low molecular weight phosphatase family M036_04120 SM00478 endonuclease III M036_04155 SM00861 Transketolase, pyrimidine binding domain M036_04170 SM00382 ATPases associated with a variety of cellular activities M036_04225 SM00382 ATPases associated with a variety of cellular activities M036_04230 SM00382 ATPases associated with a variety of cellular activities M036_04245 SM00342 helix_turn_helix, arabinose operon control protein M036_04265 SM00387 Histidine kinase-like ATPases M036_04270 SM00421 helix_turn_helix, Lux Regulon M036_04270 SM00448 cheY-homologous receiver domain M036_04275 SM00382 ATPases associated with a variety of cellular activities M036_04325 SM00347 helix_turn_helix multiple antibiotic resistance protein M036_04405 SM00287 Bacterial SH3 domain homologues M036_04435 SM00478 endonuclease III M036_04435 SM00525 M036_04435 M036_04465 SM00382 ATPases associated with a variety of cellular activities M036_04635 SM01060 M036_04635 M036_04640 SM00382 ATPases associated with a variety of cellular activities M036_04645 SM00062 Bacterial periplasmic substrate-binding proteins M036_04675 SM00530 Helix-turn-helix XRE-family like proteins M036_04690 SM00567 E-Z type HEAT repeats M036_04725 SM00763 PrkA AAA domain M036_04740 SM00347 helix_turn_helix multiple antibiotic resistance protein M036_04770 SM00345 helix_turn_helix gluconate operon transcriptional repressor M036_04775 SM00382 ATPases associated with a variety of cellular activities M036_04780 SM00382 ATPases associated with a variety of cellular activities M036_04790 SM00357 Cold shock protein domain M036_04805 SM00267 diguanylate cyclase M036_04835 SM00318 Staphylococcal nuclease homologues M036_04845 SM00363 S4 RNA-binding domain M036_04855 SM00116 Domain in cystathionine beta-synthase and other proteins. M036_04900 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. M036_04900 SM00387 Histidine kinase-like ATPases M036_04905 SM00421 helix_turn_helix, Lux Regulon M036_04905 SM00448 cheY-homologous receiver domain M036_04925 SM00257 Lysin motif M036_04945 SM00098 Alkaline phosphatase homologues M036_04950 SM00257 Lysin motif M036_04980 SM00345 helix_turn_helix gluconate operon transcriptional repressor M036_05010 SM00563 Phosphate acyltransferases M036_05015 SM01091 Transporter associated domain M036_05030 SM01091 Transporter associated domain M036_05095 SM00382 ATPases associated with a variety of cellular activities M036_05100 SM00382 ATPases associated with a variety of cellular activities M036_05150 SM00729 Elongator protein 3, MiaB family, Radical SAM M036_05180 SM00382 ATPases associated with a variety of cellular activities M036_05200 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. M036_05235 SM00347 helix_turn_helix multiple antibiotic resistance protein M036_05265 SM00382 ATPases associated with a variety of cellular activities M036_05345 SM01022 M036_05345 M036_05360 SM00849 Metallo-beta-lactamase superfamily M036_05400 SM00829 Enoylreductase M036_05415 SM00855 Phosphoglycerate mutase family M036_05435 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). M036_05450 SM00914 M036_05450 M036_05465 SM00894 Excalibur calcium-binding domain M036_05500 SM00347 helix_turn_helix multiple antibiotic resistance protein M036_05525 SM00354 helix_turn _helix lactose operon repressor M036_05665 SM00342 helix_turn_helix, arabinose operon control protein M036_05670 SM00354 helix_turn _helix lactose operon repressor M036_05690 SM00345 helix_turn_helix gluconate operon transcriptional repressor M036_05735 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain M036_05765 SM00316 Ribosomal protein S1-like RNA-binding domain M036_05775 SM00752 Horizontally Transferred TransMembrane Domain M036_05860 SM00859 Semialdehyde dehydrogenase, NAD binding domain M036_05880 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain M036_05885 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain M036_05935 SM00825 Beta-ketoacyl synthase M036_05945 SM00382 ATPases associated with a variety of cellular activities M036_05950 SM00382 ATPases associated with a variety of cellular activities M036_06050 SM01118 M036_06050 M036_06060 SM00954 Region found in RelA / SpoT proteins M036_06285 SM00635 Bacterial Ig-like domain 2 M036_06380 SM00926 Molybdopterin oxidoreductase Fe4S4 domain M036_06380 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region M036_06430 SM00382 ATPases associated with a variety of cellular activities M036_06440 SM00835 Cupin M036_06475 SM00829 Enoylreductase M036_06495 SM00354 helix_turn _helix lactose operon repressor M036_06505 SM00858 M036_06505 M036_06520 SM00382 ATPases associated with a variety of cellular activities M036_06525 SM00028 Tetratricopeptide repeats M036_06540 SM00257 Lysin motif M036_06540 SM00644 M036_06540 M036_06565 SM00530 Helix-turn-helix XRE-family like proteins M036_06580 SM00382 ATPases associated with a variety of cellular activities M036_06685 SM00257 Lysin motif M036_06750 SM00257 Lysin motif M036_06750 SM00644 M036_06750 M036_06800 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. M036_06825 SM00382 ATPases associated with a variety of cellular activities M036_06840 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain M036_06850 SM00382 ATPases associated with a variety of cellular activities M036_06910 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase M036_06925 SM00347 helix_turn_helix multiple antibiotic resistance protein M036_06965 SM00382 ATPases associated with a variety of cellular activities M036_06980 SM00448 cheY-homologous receiver domain M036_06980 SM00862 Transcriptional regulatory protein, C terminal M036_06985 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain M036_06985 SM00387 Histidine kinase-like ATPases M036_06985 SM00388 His Kinase A (phosphoacceptor) domain M036_07010 SM00116 Domain in cystathionine beta-synthase and other proteins. M036_07010 SM00924 MgtE intracellular N domain M036_07015 SM00422 helix_turn_helix, mercury resistance M036_07030 SM00347 helix_turn_helix multiple antibiotic resistance protein M036_07065 SM00559 Ku70 and Ku80 are 70kDa and 80kDa subunits of the Lupus Ku autoantigen M036_07070 SM00052 Putative diguanylate phosphodiesterase M036_07070 SM00267 diguanylate cyclase M036_07130 SM00091 PAS domain M036_07130 SM00387 Histidine kinase-like ATPases M036_07130 SM00388 His Kinase A (phosphoacceptor) domain M036_07175 SM01007 Class II Aldolase and Adducin N-terminal domain M036_07200 SM00387 Histidine kinase-like ATPases M036_07200 SM00388 His Kinase A (phosphoacceptor) domain M036_07205 SM00347 helix_turn_helix multiple antibiotic resistance protein M036_07220 SM00382 ATPases associated with a variety of cellular activities M036_07220 SM01086 C-terminal, D2-small domain, of ClpB protein M036_07255 SM00822 M036_07255 M036_07260 SM00257 Lysin motif M036_07265 SM00257 Lysin motif M036_07320 SM00354 helix_turn _helix lactose operon repressor M036_07325 SM01061 CAT RNA binding domain M036_07360 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). M036_07360 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain M036_07380 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) M036_07380 SM00091 PAS domain M036_07380 SM00387 Histidine kinase-like ATPases M036_07380 SM00388 His Kinase A (phosphoacceptor) domain M036_07395 SM00260 Two component signalling adaptor domain M036_07395 SM00448 cheY-homologous receiver domain M036_07410 SM00257 Lysin motif M036_07440 SM00052 Putative diguanylate phosphodiesterase M036_07540 SM00852 Probable molybdopterin binding domain M036_07560 SM00382 ATPases associated with a variety of cellular activities M036_07565 SM00382 ATPases associated with a variety of cellular activities M036_07580 SM00382 ATPases associated with a variety of cellular activities M036_07585 SM01066 Carbohydrate binding domain M036_07590 SM00420 helix_turn_helix, Deoxyribose operon repressor M036_07590 SM01134 M036_07590 M036_07615 SM00382 ATPases associated with a variety of cellular activities M036_07640 SM00966 SpoVT / AbrB like domain M036_07645 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) M036_07645 SM00091 PAS domain M036_07645 SM00387 Histidine kinase-like ATPases M036_07645 SM00388 His Kinase A (phosphoacceptor) domain M036_07665 SM00849 Metallo-beta-lactamase superfamily M036_07700 SM00861 Transketolase, pyrimidine binding domain M036_07785 SM00838 Elongation factor G C-terminus M036_07805 SM00670 Large family of predicted nucleotide-binding domains M036_07830 SM00878 Biotin carboxylase C-terminal domain M036_07875 SM00116 Domain in cystathionine beta-synthase and other proteins. M036_07925 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. M036_07980 SM00740 M036_07980 M036_07985 SM00740 M036_07985 M036_08050 SM00842 Cell division protein FtsA M036_08055 SM00864 Tubulin/FtsZ family, GTPase domain M036_08055 SM00865 Tubulin/FtsZ family, C-terminal domain M036_08080 SM00382 ATPases associated with a variety of cellular activities M036_08115 SM00363 S4 RNA-binding domain M036_08140 SM00363 S4 RNA-binding domain M036_08165 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain M036_08170 SM00851 MGS-like domain M036_08170 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain M036_08170 SM01209 M036_08170 M036_08185 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family M036_08235 SM00831 Cation transporter/ATPase, N-terminus M036_08250 SM00072 Guanylate kinase homologues. M036_08255 SM01409 M036_08255 M036_08265 SM00487 DEAD-like helicases superfamily M036_08265 SM00490 helicase superfamily c-terminal domain M036_08290 SM00331 Sigma factor PP2C-like phosphatases M036_08290 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain M036_08295 SM00220 Serine/Threonine protein kinases, catalytic domain M036_08295 SM00740 M036_08295 M036_08310 SM00983 Thiamin pyrophosphokinase, vitamin B1 binding domain M036_08330 SM01120 M036_08330 M036_08330 SM01121 M036_08330 M036_08345 SM00487 DEAD-like helicases superfamily M036_08345 SM00490 helicase superfamily c-terminal domain M036_08360 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. M036_08365 SM00822 M036_08365 M036_08375 SM00358 Double-stranded RNA binding motif M036_08375 SM00535 Ribonuclease III family M036_08380 SM00968 SMC proteins Flexible Hinge Domain M036_08385 SM00382 ATPases associated with a variety of cellular activities M036_08385 SM00962 SRP54-type protein, GTPase domain M036_08385 SM00963 SRP54-type protein, helical bundle domain M036_08400 SM00382 ATPases associated with a variety of cellular activities M036_08400 SM00962 SRP54-type protein, GTPase domain M036_08400 SM00963 SRP54-type protein, helical bundle domain M036_08460 SM00881 CoA binding domain M036_08470 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain M036_08470 SM00437 Bacterial DNA topoisomerase I DNA-binding domain M036_08470 SM00493 M036_08470 M036_08490 SM00382 ATPases associated with a variety of cellular activities M036_08490 SM01086 C-terminal, D2-small domain, of ClpB protein M036_08530 SM00382 ATPases associated with a variety of cellular activities M036_08580 SM00448 cheY-homologous receiver domain M036_08615 SM00962 SRP54-type protein, GTPase domain M036_08625 SM00448 cheY-homologous receiver domain M036_08630 SM00073 Histidine Phosphotransfer domain M036_08630 SM00260 Two component signalling adaptor domain M036_08630 SM00387 Histidine kinase-like ATPases M036_08630 SM01231 M036_08630 M036_08635 SM00260 Two component signalling adaptor domain M036_08695 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. M036_08705 SM00479 M036_08705 M036_08705 SM00481 DNA polymerase alpha chain like domain M036_08715 SM00316 Ribosomal protein S1-like RNA-binding domain M036_08715 SM00322 K homology RNA-binding domain M036_08750 SM00904 Riboflavin kinase M036_08755 SM01387 M036_08755 M036_08760 SM00316 Ribosomal protein S1-like RNA-binding domain M036_08760 SM00322 K homology RNA-binding domain M036_08795 SM00859 Semialdehyde dehydrogenase, NAD binding domain M036_08805 SM01130 M036_08805 M036_08810 SM00849 Metallo-beta-lactamase superfamily M036_08825 SM00382 ATPases associated with a variety of cellular activities M036_08825 SM00843 M036_08825 M036_08830 SM00345 helix_turn_helix gluconate operon transcriptional repressor M036_08830 SM00866 M036_08830 M036_08865 SM00530 Helix-turn-helix XRE-family like proteins M036_08875 SM00852 Probable molybdopterin binding domain M036_08880 SM00382 ATPases associated with a variety of cellular activities M036_08890 SM00322 K homology RNA-binding domain M036_08890 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. M036_08905 SM00829 Enoylreductase M036_08915 SM00729 Elongator protein 3, MiaB family, Radical SAM M036_08930 SM00533 DNA-binding domain of DNA mismatch repair MUTS family M036_08930 SM00534 ATPase domain of DNA mismatch repair MUTS family M036_08935 SM00853 MutL C terminal dimerisation domain M036_08935 SM01340 M036_08935 M036_08965 SM00849 Metallo-beta-lactamase superfamily M036_08975 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. M036_08980 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. M036_08985 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. M036_08995 SM00825 Beta-ketoacyl synthase M036_09015 SM00822 M036_09015 M036_09015 SM00823 Phosphopantetheine attachment site M036_09015 SM00825 Beta-ketoacyl synthase M036_09015 SM00826 M036_09015 M036_09015 SM01294 M036_09015 M036_09020 SM00822 M036_09020 M036_09020 SM00823 Phosphopantetheine attachment site M036_09020 SM00825 Beta-ketoacyl synthase M036_09020 SM00826 M036_09020 M036_09020 SM01294 M036_09020 M036_09025 SM00822 M036_09025 M036_09025 SM00823 Phosphopantetheine attachment site M036_09025 SM00825 Beta-ketoacyl synthase M036_09025 SM00826 M036_09025 M036_09025 SM01294 M036_09025 M036_09030 SM00822 M036_09030 M036_09030 SM00823 Phosphopantetheine attachment site M036_09030 SM00825 Beta-ketoacyl synthase M036_09030 SM00826 M036_09030 M036_09030 SM01294 M036_09030 M036_09035 SM00823 Phosphopantetheine attachment site M036_09035 SM00825 Beta-ketoacyl synthase M036_09035 SM01294 M036_09035 M036_09050 SM00849 Metallo-beta-lactamase superfamily M036_09135 SM00646 M036_09135 M036_09140 SM00382 ATPases associated with a variety of cellular activities M036_09160 SM00422 helix_turn_helix, mercury resistance M036_09165 SM01230 M036_09165 M036_09185 SM00860 SMI1 / KNR4 family M036_09250 SM00318 Staphylococcal nuclease homologues M036_09260 SM01005 Alanine racemase, C-terminal domain M036_09390 SM00257 Lysin motif M036_09395 SM00857 Resolvase, N terminal domain M036_09405 SM00861 Transketolase, pyrimidine binding domain M036_09430 SM00448 cheY-homologous receiver domain M036_09500 SM01207 M036_09500 M036_09505 SM00881 CoA binding domain M036_09510 SM00387 Histidine kinase-like ATPases M036_09510 SM00433 TopoisomeraseII M036_09515 SM00434 DNA Topoisomerase IV M036_09535 SM01067 Cellulose binding domain M036_09550 SM00606 Cellulose Binding Domain Type IV M036_09600 SM00878 Biotin carboxylase C-terminal domain M036_09635 SM00823 Phosphopantetheine attachment site M036_09635 SM00824 Thioesterase M036_09650 SM00823 Phosphopantetheine attachment site M036_09650 SM01294 M036_09650 M036_09655 SM00823 Phosphopantetheine attachment site M036_09660 SM00823 Phosphopantetheine attachment site M036_09710 SM00829 Enoylreductase M036_09730 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase M036_09745 SM00822 M036_09745 M036_09780 SM00926 Molybdopterin oxidoreductase Fe4S4 domain M036_09805 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). M036_09805 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain M036_09825 SM00656 M036_09825 M036_09845 SM00835 Cupin M036_09880 SM00530 Helix-turn-helix XRE-family like proteins M036_09945 SM00530 Helix-turn-helix XRE-family like proteins M036_10035 SM00860 SMI1 / KNR4 family M036_10045 SM00860 SMI1 / KNR4 family M036_10055 SM00710 Parallel beta-helix repeats M036_10065 SM00342 helix_turn_helix, arabinose operon control protein M036_10080 SM00849 Metallo-beta-lactamase superfamily M036_10085 SM00871 Bacterial transcription activator, effector binding domain M036_10100 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor M036_10140 SM00421 helix_turn_helix, Lux Regulon M036_10140 SM00448 cheY-homologous receiver domain M036_10145 SM00257 Lysin motif M036_10150 SM00341 Helicase and RNase D C-terminal M036_10150 SM00487 DEAD-like helicases superfamily M036_10150 SM00490 helicase superfamily c-terminal domain M036_10150 SM00956 M036_10150 M036_10240 SM00861 Transketolase, pyrimidine binding domain M036_10245 SM00327 von Willebrand factor (vWF) type A domain M036_10250 SM00382 ATPases associated with a variety of cellular activities M036_10260 SM00257 Lysin motif M036_10360 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. M036_10360 SM00245 tail specific protease M036_10395 SM00014 Acid phosphatase homologues M036_10440 SM00882 Coenzyme A transferase M036_10445 SM00882 Coenzyme A transferase M036_10510 SM00347 helix_turn_helix multiple antibiotic resistance protein M036_10550 SM00382 ATPases associated with a variety of cellular activities M036_10600 SM00567 E-Z type HEAT repeats M036_10600 SM00932 Scaffold protein Nfu/NifU N terminal M036_10605 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. M036_10625 SM00357 Cold shock protein domain M036_10665 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs M036_10665 SM00475 5'-3' exonuclease M036_10730 SM00354 helix_turn _helix lactose operon repressor M036_10745 SM00491 M036_10745 M036_10755 SM00981 M036_10755 M036_10780 SM00487 DEAD-like helicases superfamily M036_10780 SM00490 helicase superfamily c-terminal domain M036_10840 SM00478 endonuclease III M036_10840 SM00525 M036_10840 M036_10870 SM00479 M036_10870 M036_10870 SM00487 DEAD-like helicases superfamily M036_10870 SM00491 M036_10870 M036_10910 SM00851 MGS-like domain M036_10960 SM00914 M036_10960 M036_10965 SM00028 Tetratricopeptide repeats M036_11030 SM00138 Methyltransferase, chemotaxis proteins M036_11040 SM00562 M036_11040 M036_11070 SM00411 bacterial (prokaryotic) histone like domain M036_11120 SM01240 M036_11120 M036_11125 SM00316 Ribosomal protein S1-like RNA-binding domain M036_11165 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase M036_11185 SM00257 Lysin motif M036_11195 SM00487 DEAD-like helicases superfamily M036_11195 SM00490 helicase superfamily c-terminal domain M036_11240 SM00091 PAS domain M036_11240 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain M036_11240 SM00387 Histidine kinase-like ATPases M036_11240 SM00388 His Kinase A (phosphoacceptor) domain M036_11245 SM00448 cheY-homologous receiver domain M036_11245 SM00862 Transcriptional regulatory protein, C terminal M036_11265 SM00363 S4 RNA-binding domain M036_11280 SM00936 Penicillin-binding protein 5, C-terminal domain M036_11420 SM00387 Histidine kinase-like ATPases M036_11430 SM00936 Penicillin-binding protein 5, C-terminal domain M036_11470 SM00919 Malic enzyme, NAD binding domain M036_11470 SM01274 M036_11470 M036_11485 SM00870 M036_11485 M036_11490 SM00530 Helix-turn-helix XRE-family like proteins M036_11595 SM00849 Metallo-beta-lactamase superfamily M036_11625 SM00849 Metallo-beta-lactamase superfamily M036_11635 SM01350 M036_11635 M036_11690 SM00382 ATPases associated with a variety of cellular activities M036_11700 SM00062 Bacterial periplasmic substrate-binding proteins M036_11700 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. M036_11710 SM00046 Diacylglycerol kinase catalytic domain (presumed) M036_11720 SM00422 helix_turn_helix, mercury resistance M036_11730 SM00861 Transketolase, pyrimidine binding domain M036_11750 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase M036_11760 SM00091 PAS domain M036_11760 SM00382 ATPases associated with a variety of cellular activities M036_11805 SM00646 M036_11805 M036_11830 SM00448 cheY-homologous receiver domain M036_11840 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. M036_11855 SM00363 S4 RNA-binding domain M036_11860 SM00861 Transketolase, pyrimidine binding domain M036_11895 SM00878 Biotin carboxylase C-terminal domain M036_11940 SM00382 ATPases associated with a variety of cellular activities M036_11950 SM00841 Elongation factor P, C-terminal M036_11950 SM01185 M036_11950 M036_11985 SM00529 Helix-turn-helix diphteria tox regulatory element M036_11995 SM00450 Rhodanese Homology Domain M036_12015 SM00487 DEAD-like helicases superfamily M036_12015 SM00490 helicase superfamily c-terminal domain M036_12030 SM00530 Helix-turn-helix XRE-family like proteins M036_12090 SM00382 ATPases associated with a variety of cellular activities M036_12110 SM01091 Transporter associated domain M036_12135 SM00849 Metallo-beta-lactamase superfamily M036_12155 SM00631 M036_12155 M036_12175 SM00028 Tetratricopeptide repeats M036_12215 SM00382 ATPases associated with a variety of cellular activities M036_12220 SM00382 ATPases associated with a variety of cellular activities M036_12270 SM00257 Lysin motif M036_12305 SM00518 AP endonuclease family 2 M036_12310 SM00487 DEAD-like helicases superfamily M036_12310 SM00490 helicase superfamily c-terminal domain M036_12345 SM00400 zinc finger M036_12345 SM00493 M036_12345 M036_12360 SM00116 Domain in cystathionine beta-synthase and other proteins. M036_12405 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. M036_12460 SM00729 Elongator protein 3, MiaB family, Radical SAM M036_12475 SM00271 DnaJ molecular chaperone homology domain M036_12495 SM00729 Elongator protein 3, MiaB family, Radical SAM M036_12500 SM00838 Elongation factor G C-terminus M036_12535 SM00849 Metallo-beta-lactamase superfamily M036_12545 SM00278 Helix-hairpin-helix DNA-binding motif class 1 M036_12565 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. M036_12575 SM01103 M036_12575 M036_12610 SM00644 M036_12610 M036_12620 SM01350 M036_12620 M036_12635 SM00857 Resolvase, N terminal domain M036_12640 SM00226 Low molecular weight phosphatase family M036_12655 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor M036_12665 SM00028 Tetratricopeptide repeats M036_12705 SM00644 M036_12705 M036_12765 SM00257 Lysin motif M036_12900 SM00382 ATPases associated with a variety of cellular activities M036_12930 SM00530 Helix-turn-helix XRE-family like proteins M036_12940 SM00530 Helix-turn-helix XRE-family like proteins M036_12945 SM00530 Helix-turn-helix XRE-family like proteins M036_12980 SM00388 His Kinase A (phosphoacceptor) domain M036_12985 SM00448 cheY-homologous receiver domain M036_12985 SM00862 Transcriptional regulatory protein, C terminal M036_13025 SM00450 Rhodanese Homology Domain M036_13025 SM00849 Metallo-beta-lactamase superfamily M036_13035 SM00450 Rhodanese Homology Domain M036_13060 SM00422 helix_turn_helix, mercury resistance M036_13075 SM01091 Transporter associated domain M036_13135 SM00344 helix_turn_helix ASNC type M036_13250 SM00287 Bacterial SH3 domain homologues M036_13290 SM00422 helix_turn_helix, mercury resistance M036_13300 SM00829 Enoylreductase M036_13310 SM00640 Glycosyl hydrolases family 32 M036_13335 SM00382 ATPases associated with a variety of cellular activities M036_13410 SM00926 Molybdopterin oxidoreductase Fe4S4 domain M036_13410 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region M036_13440 SM00650 Ribosomal RNA adenine dimethylases M036_13490 SM00257 Lysin motif M036_13490 SM00644 M036_13490 M036_13515 SM00710 Parallel beta-helix repeats M036_13520 SM00047 Lysozyme subfamily 2 M036_13615 SM00507 HNH nucleases M036_13755 SM00530 Helix-turn-helix XRE-family like proteins M036_13760 SM00530 Helix-turn-helix XRE-family like proteins M036_13810 SM00732 Likely ribonuclease with RNase H fold. M036_13820 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain M036_13830 SM00382 ATPases associated with a variety of cellular activities M036_13835 SM00062 Bacterial periplasmic substrate-binding proteins M036_13835 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. M036_13865 SM00382 ATPases associated with a variety of cellular activities M036_13870 SM00028 Tetratricopeptide repeats M036_13890 SM00382 ATPases associated with a variety of cellular activities M036_13920 SM00287 Bacterial SH3 domain homologues M036_13920 SM00646 M036_13920 M036_13930 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. M036_13930 SM00954 Region found in RelA / SpoT proteins M036_13980 SM01323 M036_13980 M036_14000 SM00382 ATPases associated with a variety of cellular activities M036_14005 SM00278 Helix-hairpin-helix DNA-binding motif class 1 M036_14060 SM00257 Lysin motif M036_14105 SM01317 M036_14105 M036_14205 SM00257 Lysin motif M036_14215 SM01004 Delta-aminolevulinic acid dehydratase M036_14250 SM00382 ATPases associated with a variety of cellular activities M036_14250 SM00464 Found in ATP-dependent protease La (LON) M036_14255 SM00382 ATPases associated with a variety of cellular activities M036_14260 SM00382 ATPases associated with a variety of cellular activities M036_14260 SM00994 ClpX C4-type zinc finger M036_14260 SM01086 C-terminal, D2-small domain, of ClpB protein M036_14285 SM01329 M036_14285 M036_14290 SM00917 LeuA allosteric (dimerisation) domain M036_14350 SM00909 Sporulation and spore germination M036_14360 SM00347 helix_turn_helix multiple antibiotic resistance protein M036_14365 SM00421 helix_turn_helix, Lux Regulon M036_14405 SM00465 GIY-YIG type nucleases (URI domain) M036_14415 SM00813 Alpha-L-arabinofuranosidase C-terminus M036_14420 SM00893 Electron transfer flavoprotein domain M036_14425 SM00893 Electron transfer flavoprotein domain M036_14455 SM00463 Small MutS-related domain M036_14455 SM00533 DNA-binding domain of DNA mismatch repair MUTS family M036_14455 SM00534 ATPase domain of DNA mismatch repair MUTS family M036_14460 SM00278 Helix-hairpin-helix DNA-binding motif class 1 M036_14460 SM00481 DNA polymerase alpha chain like domain M036_14460 SM00483 DNA polymerase X family M036_14480 SM00873 B3/4 domain M036_14480 SM00874 tRNA synthetase B5 domain M036_14480 SM00896 Ferredoxin-fold anticodon binding domain M036_14495 SM00967 RNA 2'-O ribose methyltransferase substrate binding M036_14530 SM00813 Alpha-L-arabinofuranosidase C-terminus M036_14560 SM01007 Class II Aldolase and Adducin N-terminal domain M036_14625 SM00448 cheY-homologous receiver domain M036_14625 SM00850 LytTr DNA-binding domain M036_14630 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. M036_14630 SM00387 Histidine kinase-like ATPases M036_14640 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain M036_14655 SM00382 ATPases associated with a variety of cellular activities M036_14675 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain M036_14705 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain M036_14705 SM01232 M036_14705 M036_14710 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs M036_14710 SM00474 3'-5' exonuclease M036_14710 SM00475 5'-3' exonuclease M036_14710 SM00482 DNA polymerase A domain M036_14715 SM00091 PAS domain M036_14715 SM00387 Histidine kinase-like ATPases M036_14715 SM00388 His Kinase A (phosphoacceptor) domain M036_14720 SM00448 cheY-homologous receiver domain M036_14720 SM00862 Transcriptional regulatory protein, C terminal M036_14730 SM01329 M036_14730 M036_14775 SM00919 Malic enzyme, NAD binding domain M036_14775 SM01274 M036_14775 M036_14780 SM00481 DNA polymerase alpha chain like domain M036_14810 SM00116 Domain in cystathionine beta-synthase and other proteins. M036_14830 SM00904 Riboflavin kinase M036_14850 SM00382 ATPases associated with a variety of cellular activities M036_14865 SM00062 Bacterial periplasmic substrate-binding proteins M036_14870 SM00062 Bacterial periplasmic substrate-binding proteins M036_14885 SM00849 Metallo-beta-lactamase superfamily M036_14910 SM00852 Probable molybdopterin binding domain M036_14970 SM00981 M036_14970 M036_15000 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. M036_15005 SM00267 diguanylate cyclase M036_15010 SM00363 S4 RNA-binding domain M036_15010 SM01390 M036_15010 M036_15020 SM00363 S4 RNA-binding domain M036_15035 SM00116 Domain in cystathionine beta-synthase and other proteins. M036_15055 SM00354 helix_turn _helix lactose operon repressor M036_15060 SM00830 Chorismate mutase type II M036_15085 SM00382 ATPases associated with a variety of cellular activities M036_15085 SM00843 M036_15085 M036_15120 SM00919 Malic enzyme, NAD binding domain M036_15120 SM01274 M036_15120 M036_15125 SM00849 Metallo-beta-lactamase superfamily M036_15145 SM00642 Alpha-amylase domain M036_15150 SM00046 Diacylglycerol kinase catalytic domain (presumed) M036_15185 SM00382 ATPases associated with a variety of cellular activities M036_15190 SM00420 helix_turn_helix, Deoxyribose operon repressor M036_15195 SM00363 S4 RNA-binding domain M036_15250 SM00342 helix_turn_helix, arabinose operon control protein M036_15275 SM00729 Elongator protein 3, MiaB family, Radical SAM M036_15275 SM00876 Biotin and Thiamin Synthesis associated domain M036_15305 SM00354 helix_turn _helix lactose operon repressor M036_15330 SM00450 Rhodanese Homology Domain M036_15345 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) M036_15345 SM00091 PAS domain M036_15365 SM00382 ATPases associated with a variety of cellular activities M036_15370 SM00387 Histidine kinase-like ATPases M036_15375 SM00448 cheY-homologous receiver domain M036_15375 SM00862 Transcriptional regulatory protein, C terminal M036_15385 SM00382 ATPases associated with a variety of cellular activities M036_15400 SM00382 ATPases associated with a variety of cellular activities M036_15405 SM00345 helix_turn_helix gluconate operon transcriptional repressor M036_15420 SM00729 Elongator protein 3, MiaB family, Radical SAM M036_15480 SM00382 ATPases associated with a variety of cellular activities M036_15520 SM01234 M036_15520 M036_15525 SM00947 Carbonic anhydrase M036_15560 SM00382 ATPases associated with a variety of cellular activities M036_15570 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain M036_15615 SM00984 UDP binding domain M036_15675 SM00642 Alpha-amylase domain M036_15815 SM00244 prohibitin homologues M036_15870 SM00047 Lysozyme subfamily 2 M036_15920 SM00420 helix_turn_helix, Deoxyribose operon repressor M036_15920 SM01134 M036_15920 M036_15925 SM01007 Class II Aldolase and Adducin N-terminal domain M036_15930 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). M036_15930 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain M036_15930 SM00319 Homologues of the ligand binding domain of Tar M036_15935 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). M036_15935 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain M036_15935 SM00319 Homologues of the ligand binding domain of Tar M036_15940 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). M036_15940 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain M036_15940 SM00319 Homologues of the ligand binding domain of Tar M036_15945 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). M036_15945 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain M036_15945 SM00319 Homologues of the ligand binding domain of Tar M036_15970 SM00642 Alpha-amylase domain M036_15975 SM01091 Transporter associated domain M036_16035 SM00316 Ribosomal protein S1-like RNA-binding domain M036_16045 SM00344 helix_turn_helix ASNC type M036_16065 SM00387 Histidine kinase-like ATPases M036_16065 SM00388 His Kinase A (phosphoacceptor) domain M036_16070 SM01298 M036_16070 M036_16075 SM00479 M036_16075 M036_16105 SM00091 PAS domain M036_16105 SM00387 Histidine kinase-like ATPases M036_16110 SM00448 cheY-homologous receiver domain M036_16120 SM00382 ATPases associated with a variety of cellular activities M036_16185 SM00421 helix_turn_helix, Lux Regulon M036_16185 SM00448 cheY-homologous receiver domain M036_16215 SM00052 Putative diguanylate phosphodiesterase M036_16260 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. M036_16305 SM01002 Alanine dehydrogenase/PNT, C-terminal domain M036_16305 SM01003 Alanine dehydrogenase/PNT, N-terminal domain M036_16315 SM00923 MbtH-like protein M036_16320 SM00823 Phosphopantetheine attachment site M036_16320 SM00824 Thioesterase M036_16405 SM01240 M036_16405 M036_16505 SM00729 Elongator protein 3, MiaB family, Radical SAM M036_16585 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain M036_16620 SM00382 ATPases associated with a variety of cellular activities M036_16625 SM00345 helix_turn_helix gluconate operon transcriptional repressor M036_16625 SM00866 M036_16625 M036_16655 SM00465 GIY-YIG type nucleases (URI domain) M036_16680 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor M036_16705 SM00382 ATPases associated with a variety of cellular activities M036_16730 SM00382 ATPases associated with a variety of cellular activities M036_16730 SM00930 M036_16730 M036_16745 SM00493 M036_16745 M036_16800 SM00347 helix_turn_helix multiple antibiotic resistance protein M036_16830 SM00382 ATPases associated with a variety of cellular activities M036_16855 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. M036_16865 SM00448 cheY-homologous receiver domain M036_16865 SM00862 Transcriptional regulatory protein, C terminal M036_16870 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain M036_16870 SM00387 Histidine kinase-like ATPases M036_16870 SM00388 His Kinase A (phosphoacceptor) domain M036_16910 SM00421 helix_turn_helix, Lux Regulon M036_16910 SM00448 cheY-homologous receiver domain M036_16915 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain M036_16915 SM00387 Histidine kinase-like ATPases M036_16950 SM00382 ATPases associated with a variety of cellular activities M036_16975 SM00387 Histidine kinase-like ATPases M036_16975 SM00388 His Kinase A (phosphoacceptor) domain M036_16980 SM00448 cheY-homologous receiver domain M036_16980 SM00862 Transcriptional regulatory protein, C terminal M036_17000 SM00835 Cupin M036_17015 SM00382 ATPases associated with a variety of cellular activities M036_17025 SM00382 ATPases associated with a variety of cellular activities M036_17190 SM00316 Ribosomal protein S1-like RNA-binding domain M036_17190 SM00357 Cold shock protein domain M036_17190 SM00955 M036_17190 M036_17210 SM00530 Helix-turn-helix XRE-family like proteins M036_17215 SM00530 Helix-turn-helix XRE-family like proteins M036_17220 SM00530 Helix-turn-helix XRE-family like proteins M036_17230 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). M036_17230 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain M036_17250 SM00116 Domain in cystathionine beta-synthase and other proteins. M036_17250 SM00382 ATPases associated with a variety of cellular activities M036_17265 SM00752 Horizontally Transferred TransMembrane Domain M036_17280 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor M036_17300 SM00116 Domain in cystathionine beta-synthase and other proteins. M036_17300 SM00382 ATPases associated with a variety of cellular activities M036_17335 SM01192 M036_17335 M036_17335 SM01193 M036_17335 M036_17360 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain M036_17375 SM00345 helix_turn_helix gluconate operon transcriptional repressor M036_17400 SM00636 M036_17400 M036_17420 SM00421 helix_turn_helix, Lux Regulon M036_17420 SM00448 cheY-homologous receiver domain M036_17435 SM00382 ATPases associated with a variety of cellular activities M036_17450 SM00331 Sigma factor PP2C-like phosphatases M036_17480 SM00354 helix_turn _helix lactose operon repressor M036_17485 SM00345 helix_turn_helix gluconate operon transcriptional repressor M036_17485 SM00895 M036_17485 M036_17580 SM00530 Helix-turn-helix XRE-family like proteins M036_17620 SM00640 Glycosyl hydrolases family 32 M036_17675 SM00642 Alpha-amylase domain M036_17705 SM00642 Alpha-amylase domain M036_17710 SM00354 helix_turn _helix lactose operon repressor M036_17730 SM00947 Carbonic anhydrase M036_17745 SM00382 ATPases associated with a variety of cellular activities M036_17750 SM00387 Histidine kinase-like ATPases M036_17755 SM00448 cheY-homologous receiver domain M036_17755 SM00862 Transcriptional regulatory protein, C terminal M036_17805 SM00028 Tetratricopeptide repeats M036_17810 SM00382 ATPases associated with a variety of cellular activities M036_17915 SM00345 helix_turn_helix gluconate operon transcriptional repressor M036_17915 SM00866 M036_17915 M036_17925 SM00347 helix_turn_helix multiple antibiotic resistance protein M036_17940 SM00347 helix_turn_helix multiple antibiotic resistance protein M036_17980 SM00382 ATPases associated with a variety of cellular activities M036_17985 SM00487 DEAD-like helicases superfamily M036_17985 SM00490 helicase superfamily c-terminal domain M036_18010 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. M036_18020 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. M036_18020 SM00245 tail specific protease M036_18030 SM00382 ATPases associated with a variety of cellular activities M036_18045 SM00937 M036_18045 M036_18050 SM00957 SecA DEAD-like domain M036_18050 SM00958 SecA preprotein cross-linking domain M036_18140 SM00487 DEAD-like helicases superfamily M036_18140 SM00490 helicase superfamily c-terminal domain M036_18150 SM00421 helix_turn_helix, Lux Regulon M036_18150 SM00448 cheY-homologous receiver domain M036_18155 SM00387 Histidine kinase-like ATPases M036_18195 SM00984 UDP binding domain M036_18215 SM00646 M036_18215 M036_18255 SM00382 ATPases associated with a variety of cellular activities M036_18295 SM00047 Lysozyme subfamily 2 M036_18295 SM00287 Bacterial SH3 domain homologues M036_18350 SM00854 Bacterial capsule synthesis protein PGA_cap M036_18365 SM00354 helix_turn _helix lactose operon repressor M036_18380 SM00382 ATPases associated with a variety of cellular activities M036_18395 SM00287 Bacterial SH3 domain homologues M036_18450 SM00903 Flavin reductase like domain M036_18465 SM00344 helix_turn_helix ASNC type M036_18525 SM00984 UDP binding domain M036_18555 SM00487 DEAD-like helicases superfamily M036_18555 SM00490 helicase superfamily c-terminal domain M036_18565 SM00420 helix_turn_helix, Deoxyribose operon repressor M036_18565 SM01134 M036_18565 M036_18595 SM00387 Histidine kinase-like ATPases M036_18610 SM00028 Tetratricopeptide repeats M036_18635 SM00347 helix_turn_helix multiple antibiotic resistance protein M036_18645 SM00710 Parallel beta-helix repeats M036_18645 SM00722 Domain present in carbohydrate binding proteins and sugar hydrolses M036_18675 SM00938 Nitrogen regulatory protein P-II M036_18680 SM00014 Acid phosphatase homologues M036_18715 SM00155 Phospholipase D. Active site motifs. M036_18720 SM00422 helix_turn_helix, mercury resistance M036_18765 SM00028 Tetratricopeptide repeats M036_18770 SM00729 Elongator protein 3, MiaB family, Radical SAM M036_18785 SM00327 von Willebrand factor (vWF) type A domain M036_18795 SM00327 von Willebrand factor (vWF) type A domain M036_18830 SM00382 ATPases associated with a variety of cellular activities M036_18895 SM00226 Low molecular weight phosphatase family M036_18935 SM00937 M036_18935 M036_18955 SM00919 Malic enzyme, NAD binding domain M036_18955 SM01274 M036_18955 M036_18970 SM00357 Cold shock protein domain M036_18970 SM00382 ATPases associated with a variety of cellular activities M036_18970 SM00959 Rho termination factor, N-terminal domain M036_18995 SM00448 cheY-homologous receiver domain M036_19025 SM00155 Phospholipase D. Active site motifs. M036_19045 SM00382 ATPases associated with a variety of cellular activities M036_19050 SM00155 Phospholipase D. Active site motifs. M036_19075 SM00926 Molybdopterin oxidoreductase Fe4S4 domain M036_19090 SM00100 Cyclic nucleotide-monophosphate binding domain M036_19090 SM00419 helix_turn_helix, cAMP Regulatory protein M036_19100 SM00836 DALR anticodon binding domain M036_19100 SM01016 Arginyl tRNA synthetase N terminal dom M036_19115 SM00729 Elongator protein 3, MiaB family, Radical SAM M036_19165 SM00028 Tetratricopeptide repeats M036_19210 SM00347 helix_turn_helix multiple antibiotic resistance protein M036_19215 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain M036_19245 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. M036_19340 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase M036_19380 SM00858 M036_19380 M036_19435 SM00986 Uracil DNA glycosylase superfamily M036_19435 SM00987 UreE urease accessory protein, C-terminal domain M036_19470 SM00640 Glycosyl hydrolases family 32 M036_19485 SM01061 CAT RNA binding domain M036_19635 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase M036_19645 SM00612 M036_19645 M036_19670 SM01061 CAT RNA binding domain M036_19685 SM00347 helix_turn_helix multiple antibiotic resistance protein M036_19690 SM00363 S4 RNA-binding domain M036_19700 SM00954 Region found in RelA / SpoT proteins M036_19785 SM01060 M036_19785 M036_19800 SM00382 ATPases associated with a variety of cellular activities M036_19835 SM00382 ATPases associated with a variety of cellular activities M036_19840 SM00382 ATPases associated with a variety of cellular activities M036_19875 SM00382 ATPases associated with a variety of cellular activities M036_19915 SM00421 helix_turn_helix, Lux Regulon M036_19915 SM00448 cheY-homologous receiver domain M036_19955 SM00882 Coenzyme A transferase M036_19960 SM00882 Coenzyme A transferase M036_19995 SM01060 M036_19995 M036_20010 SM01061 CAT RNA binding domain M036_20025 SM00487 DEAD-like helicases superfamily M036_20025 SM00490 helicase superfamily c-terminal domain M036_20115 SM00860 SMI1 / KNR4 family M036_20170 SM00941 Pyrimidine nucleoside phosphorylase C-terminal domain M036_20180 SM01133 M036_20180 M036_20210 SM00382 ATPases associated with a variety of cellular activities M036_20220 SM00062 Bacterial periplasmic substrate-binding proteins M036_20290 SM00382 ATPases associated with a variety of cellular activities M036_20295 SM00387 Histidine kinase-like ATPases M036_20300 SM00448 cheY-homologous receiver domain M036_20300 SM00862 Transcriptional regulatory protein, C terminal M036_20355 SM00420 helix_turn_helix, Deoxyribose operon repressor M036_20355 SM01134 M036_20355 M036_20380 SM00387 Histidine kinase-like ATPases M036_20410 SM00558 A domain family that is part of the cupin metalloenzyme superfamily. M036_20440 SM00564 beta-propeller repeat M036_20475 SM00347 helix_turn_helix multiple antibiotic resistance protein M036_20500 SM00345 helix_turn_helix gluconate operon transcriptional repressor M036_20500 SM00895 M036_20500 M036_20515 SM01350 M036_20515 M036_20540 SM00345 helix_turn_helix gluconate operon transcriptional repressor M036_20540 SM00866 M036_20540 M036_20555 SM00382 ATPases associated with a variety of cellular activities M036_20665 SM00091 PAS domain M036_20665 SM00382 ATPases associated with a variety of cellular activities M036_20670 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain M036_20670 SM00387 Histidine kinase-like ATPases M036_20670 SM00388 His Kinase A (phosphoacceptor) domain M036_20675 SM00448 cheY-homologous receiver domain M036_20675 SM00862 Transcriptional regulatory protein, C terminal M036_20690 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. M036_20695 SM00849 Metallo-beta-lactamase superfamily M036_20710 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) M036_20710 SM00091 PAS domain M036_20710 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain M036_20710 SM00387 Histidine kinase-like ATPases M036_20710 SM00388 His Kinase A (phosphoacceptor) domain M036_20715 SM00448 cheY-homologous receiver domain M036_20715 SM00862 Transcriptional regulatory protein, C terminal M036_20740 SM00788 Adenylosuccinate synthetase M036_20750 SM00382 ATPases associated with a variety of cellular activities M036_20790 SM00267 diguanylate cyclase M036_20815 SM01131 M036_20815 M036_20835 SM00422 helix_turn_helix, mercury resistance M036_20875 SM00849 Metallo-beta-lactamase superfamily M036_20880 SM00347 helix_turn_helix multiple antibiotic resistance protein M036_20930 SM01266 M036_20930 M036_20940 SM00354 helix_turn _helix lactose operon repressor M036_20970 SM00926 Molybdopterin oxidoreductase Fe4S4 domain M036_20990 SM00470 ParB-like nuclease domain M036_21010 SM00470 ParB-like nuclease domain M036_21020 SM01228 M036_21020 M036_21030 SM00322 K homology RNA-binding domain M036_21030 SM00393 Putative single-stranded nucleic acids-binding domain M036_21030 SM01245 M036_21030