locus-tag class description ABU16_0001 PF00857 Isochorismatase family ABU16_0002 PF07997 Protein of unknown function (DUF1694) ABU16_0003 PF14166 YueH-like protein ABU16_0004 PF10676 Spore germination protein gerPA/gerPF ABU16_0005 PF01594 AI-2E family transporter ABU16_0006 PF10049 Protein of unknown function (DUF2283) ABU16_0007 PF10842 Protein of unknown function (DUF2642) ABU16_0008 PF01966 HD domain ABU16_0009 PF00106 short chain dehydrogenase ABU16_0010 PF17355 Family of unknown function (DUF5383) ABU16_0012 PF01580 FtsK/SpoIIIE family ABU16_0012 PF12538 DNA transporter ABU16_0013 PF10140 WXG100 protein secretion system (Wss), protein YukC ABU16_0014 PF08817 WXG100 protein secretion system (Wss), protein YukD ABU16_0015 PF06013 Proteins of 100 residues with WXG ABU16_0017 PF06018 CodY GAF-like domain ABU16_0017 PF13556 PucR C-terminal helix-turn-helix domain ABU16_0017 PF17853 GGDEF-like domain ABU16_0018 PF05222 Alanine dehydrogenase/PNT, N-terminal domain ABU16_0018 PF01262 Alanine dehydrogenase/PNT, C-terminal domain ABU16_0019 PF10042 Uncharacterized conserved protein (DUF2278) ABU16_0020 PF03621 MbtH-like protein ABU16_0021 PF13193 AMP-binding enzyme C-terminal domain ABU16_0021 PF00501 AMP-binding enzyme ABU16_0021 PF00668 Condensation domain ABU16_0021 PF00975 Thioesterase domain ABU16_0021 PF00550 Phosphopantetheine attachment site ABU16_0022 PF00550 Phosphopantetheine attachment site ABU16_0022 PF00857 Isochorismatase family ABU16_0023 PF13193 AMP-binding enzyme C-terminal domain ABU16_0023 PF00501 AMP-binding enzyme ABU16_0024 PF00425 chorismate binding enzyme ABU16_0025 PF00106 short chain dehydrogenase ABU16_0026 PF00756 Putative esterase ABU16_0027 PF00174 Oxidoreductase molybdopterin binding domain ABU16_0028 PF02632 BioY family ABU16_0029 PF13726 Na+-H+ antiporter family ABU16_0029 PF03553 Na+/H+ antiporter family ABU16_0030 PF00883 Cytosol aminopeptidase family, catalytic domain ABU16_0030 PF02789 Cytosol aminopeptidase family, N-terminal domain ABU16_0031 PF02681 Divergent PAP2 family ABU16_0032 PF06725 3D domain ABU16_0033 PF14068 Putative membrane protein ABU16_0034 PF17302 Family of unknown function (DUF5351) ABU16_0035 PF07992 Pyridine nucleotide-disulphide oxidoreductase ABU16_0036 PF07992 Pyridine nucleotide-disulphide oxidoreductase ABU16_0038 PF00478 IMP dehydrogenase / GMP reductase domain ABU16_0039 PF04299 Putative FMN-binding domain ABU16_0040 PF00583 Acetyltransferase (GNAT) family ABU16_0041 PF01521 Iron-sulphur cluster biosynthesis ABU16_0042 PF01678 Diaminopimelate epimerase ABU16_0043 PF01773 Na+ dependent nucleoside transporter N-terminus ABU16_0043 PF07662 Na+ dependent nucleoside transporter C-terminus ABU16_0044 PF07293 Protein of unknown function (DUF1450) ABU16_0045 PF07992 Pyridine nucleotide-disulphide oxidoreductase ABU16_0046 PF07315 Protein of unknown function (DUF1462) ABU16_0047 PF01106 NifU-like domain ABU16_0048 PF00326 Prolyl oligopeptidase family ABU16_0048 PF07676 WD40-like Beta Propeller Repeat ABU16_0049 PF00288 GHMP kinases N terminal domain ABU16_0049 PF08544 GHMP kinases C terminal ABU16_0050 PF00291 Pyridoxal-phosphate dependent enzyme ABU16_0051 PF03447 Homoserine dehydrogenase, NAD binding domain ABU16_0051 PF00742 Homoserine dehydrogenase ABU16_0051 PF01842 ACT domain ABU16_0054 PF04608 Phosphatidylglycerophosphatase A ABU16_0055 PF13344 Haloacid dehalogenase-like hydrolase ABU16_0056 PF01934 Protein of unknown function DUF86 ABU16_0057 PF06265 Protein of unknown function (DUF1027) ABU16_0058 PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) ABU16_0059 PF04055 Radical SAM superfamily ABU16_0059 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family ABU16_0060 PF01551 Peptidase family M23 ABU16_0061 PF09560 Sporulation protein YunB (Spo_YunB) ABU16_0062 PF08827 Domain of unknown function (DUF1805) ABU16_0063 PF02872 5'-nucleotidase, C-terminal domain ABU16_0064 PF01925 Sulfite exporter TauE/SafE ABU16_0065 PF01904 Protein of unknown function DUF72 ABU16_0067 PF01979 Amidohydrolase family ABU16_0068 PF07905 Purine catabolism regulatory protein-like family ABU16_0068 PF13556 PucR C-terminal helix-turn-helix domain ABU16_0068 PF17853 GGDEF-like domain ABU16_0069 PF00860 Permease family ABU16_0070 PF00860 Permease family ABU16_0071 PF01014 Uricase ABU16_0071 PF09349 OHCU decarboxylase ABU16_0072 PF00576 HIUase/Transthyretin family ABU16_0074 PF01799 [2Fe-2S] binding domain ABU16_0074 PF00111 2Fe-2S iron-sulfur cluster binding domain ABU16_0075 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase ABU16_0075 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain ABU16_0076 PF00941 FAD binding domain in molybdopterin dehydrogenase ABU16_0077 PF12804 MobA-like NTP transferase domain ABU16_0078 PF02625 XdhC and CoxI family ABU16_0078 PF13478 XdhC Rossmann domain ABU16_0079 PF00266 Aminotransferase class-V ABU16_0080 PF01546 Peptidase family M20/M25/M40 ABU16_0082 PF04231 Endonuclease I ABU16_0083 PF03459 TOBE domain ABU16_0083 PF00005 ABC transporter ABU16_0083 PF17912 MalK OB fold domain ABU16_0084 PF07702 UTRA domain ABU16_0084 PF00392 Bacterial regulatory proteins, gntR family ABU16_0085 PF00294 pfkB family carbohydrate kinase ABU16_0086 PF00528 Binding-protein-dependent transport system inner membrane component ABU16_0087 PF00528 Binding-protein-dependent transport system inner membrane component ABU16_0088 PF01547 Bacterial extracellular solute-binding protein ABU16_0089 PF01380 SIS domain ABU16_0090 PF01541 GIY-YIG catalytic domain ABU16_0091 PF01266 FAD dependent oxidoreductase ABU16_0092 PF01266 FAD dependent oxidoreductase ABU16_0095 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily ABU16_0097 PF01458 Uncharacterized protein family (UPF0051) ABU16_0098 PF01592 NifU-like N terminal domain ABU16_0099 PF00266 Aminotransferase class-V ABU16_0100 PF01458 Uncharacterized protein family (UPF0051) ABU16_0101 PF00005 ABC transporter ABU16_0105 PF02627 Carboxymuconolactone decarboxylase family ABU16_0106 PF03180 NLPA lipoprotein ABU16_0107 PF00528 Binding-protein-dependent transport system inner membrane component ABU16_0108 PF00005 ABC transporter ABU16_0108 PF09383 NIL domain ABU16_0110 PF02036 SCP-2 sterol transfer family ABU16_0111 PF00085 Thioredoxin ABU16_0112 PF01751 Toprim domain ABU16_0113 PF10830 Protein of unknown function (DUF2553) ABU16_0114 PF01597 Glycine cleavage H-protein ABU16_0115 PF03960 ArsC family ABU16_0116 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ABU16_0116 PF02770 Acyl-CoA dehydrogenase, middle domain ABU16_0116 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ABU16_0117 PF00108 Thiolase, N-terminal domain ABU16_0117 PF02803 Thiolase, C-terminal domain ABU16_0118 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain ABU16_0118 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain ABU16_0118 PF00378 Enoyl-CoA hydratase/isomerase ABU16_0119 PF14115 YuzL-like protein ABU16_0120 PF01619 Proline dehydrogenase ABU16_0122 PF07875 Coat F domain ABU16_0123 PF01047 MarR family ABU16_0124 PF07690 Major Facilitator Superfamily ABU16_0125 PF14552 Tautomerase enzyme ABU16_0127 PF00106 short chain dehydrogenase ABU16_0128 PF03466 LysR substrate binding domain ABU16_0128 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABU16_0129 PF10835 Protein of unknown function (DUF2573) ABU16_0130 PF00005 ABC transporter ABU16_0131 PF14039 YusW-like protein ABU16_0133 PF00106 short chain dehydrogenase ABU16_0134 PF00210 Ferritin-like domain ABU16_0135 PF13180 PDZ domain ABU16_0136 PF00486 Transcriptional regulatory protein, C terminal ABU16_0136 PF00072 Response regulator receiver domain ABU16_0137 PF00672 HAMP domain ABU16_0137 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABU16_0137 PF00512 His Kinase A (phospho-acceptor) domain ABU16_0139 PF00440 Bacterial regulatory proteins, tetR family ABU16_0140 PF00206 Lyase ABU16_0140 PF10415 Fumarase C C-terminus ABU16_0141 PF13113 Protein of unknown function (DUF3970) ABU16_0142 PF03323 Bacillus/Clostridium GerA spore germination protein ABU16_0143 PF03845 Spore germination protein ABU16_0144 PF05504 Spore germination B3/ GerAC like, C-terminal ABU16_0145 PF00196 Bacterial regulatory proteins, luxR family ABU16_0145 PF00072 Response regulator receiver domain ABU16_0146 PF00672 HAMP domain ABU16_0146 PF07730 Histidine kinase ABU16_0146 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABU16_0147 PF09922 Cell wall-active antibiotics response 4TMS YvqF ABU16_0148 PF13349 Putative adhesin ABU16_0149 PF04012 PspA/IM30 family ABU16_0152 PF07690 Major Facilitator Superfamily ABU16_0153 PF01923 Cobalamin adenosyltransferase ABU16_0154 PF00005 ABC transporter ABU16_0155 PF01032 FecCD transport family ABU16_0156 PF01497 Periplasmic binding protein ABU16_0158 PF00106 short chain dehydrogenase ABU16_0159 PF08450 SMP-30/Gluconolactonase/LRE-like region ABU16_0160 PF00512 His Kinase A (phospho-acceptor) domain ABU16_0160 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABU16_0161 PF00486 Transcriptional regulatory protein, C terminal ABU16_0161 PF00072 Response regulator receiver domain ABU16_0164 PF04545 Sigma-70, region 4 ABU16_0165 PF12841 YvrJ protein family ABU16_0167 PF00190 Cupin ABU16_0168 PF14184 Regulatory protein YrvL ABU16_0169 PF02687 FtsX-like permease family ABU16_0169 PF12704 MacB-like periplasmic core domain ABU16_0170 PF00005 ABC transporter ABU16_0171 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion ABU16_0172 PF00005 ABC transporter ABU16_0173 PF01032 FecCD transport family ABU16_0174 PF01032 FecCD transport family ABU16_0175 PF01497 Periplasmic binding protein ABU16_0177 PF13520 Amino acid permease ABU16_0178 PF09575 Small spore protein J (Spore_SspJ) ABU16_0179 PF04307 LexA-binding, inner membrane-associated putative hydrolase ABU16_0180 PF00884 Sulfatase ABU16_0181 PF12727 PBP superfamily domain ABU16_0181 PF12728 Helix-turn-helix domain ABU16_0183 PF00528 Binding-protein-dependent transport system inner membrane component ABU16_0184 PF00248 Aldo/keto reductase family ABU16_0186 PF00999 Sodium/hydrogen exchanger family ABU16_0187 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain ABU16_0187 PF01077 Nitrite and sulphite reductase 4Fe-4S domain ABU16_0188 PF00175 Oxidoreductase NAD-binding domain ABU16_0188 PF00258 Flavodoxin ABU16_0188 PF00667 FAD binding domain ABU16_0189 PF13538 UvrD-like helicase C-terminal domain ABU16_0190 PF03458 UPF0126 domain ABU16_0192 PF02600 Disulfide bond formation protein DsbB ABU16_0193 PF13462 Thioredoxin ABU16_0194 PF00403 Heavy-metal-associated domain ABU16_0195 PF00403 Heavy-metal-associated domain ABU16_0196 PF00403 Heavy-metal-associated domain ABU16_0197 PF02583 Metal-sensitive transcriptional repressor ABU16_0198 PF01408 Oxidoreductase family, NAD-binding Rossmann fold ABU16_0198 PF02894 Oxidoreductase family, C-terminal alpha/beta domain ABU16_0199 PF02525 Flavodoxin-like fold ABU16_0201 PF17314 Family of unknown function (DUF5360) ABU16_0202 PF00893 Small Multidrug Resistance protein ABU16_0203 PF00440 Bacterial regulatory proteins, tetR family ABU16_0204 PF00106 short chain dehydrogenase ABU16_0205 PF01668 SmpB protein ABU16_0206 PF08206 Ribonuclease B OB domain ABU16_0206 PF17876 Cold shock domain ABU16_0206 PF00773 RNB domain ABU16_0206 PF00575 S1 RNA binding domain ABU16_0207 PF12146 Serine aminopeptidase, S33 ABU16_0208 PF03840 Preprotein translocase SecG subunit ABU16_0209 PF00561 alpha/beta hydrolase fold ABU16_0210 PF01381 Helix-turn-helix ABU16_0213 PF01638 HxlR-like helix-turn-helix ABU16_0214 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ABU16_0214 PF12729 Four helix bundle sensory module for signal transduction ABU16_0214 PF00672 HAMP domain ABU16_0215 PF00528 Binding-protein-dependent transport system inner membrane component ABU16_0216 PF04069 Substrate binding domain of ABC-type glycine betaine transport system ABU16_0217 PF00528 Binding-protein-dependent transport system inner membrane component ABU16_0218 PF00005 ABC transporter ABU16_0218 PF00571 CBS domain ABU16_0219 PF12802 MarR family ABU16_0220 PF05090 Vitamin K-dependent gamma-carboxylase ABU16_0222 PF07853 Protein of unknown function (DUF1648) ABU16_0222 PF13630 SdpI/YhfL protein family ABU16_0223 PF01022 Bacterial regulatory protein, arsR family ABU16_0224 PF00528 Binding-protein-dependent transport system inner membrane component ABU16_0225 PF04069 Substrate binding domain of ABC-type glycine betaine transport system ABU16_0226 PF00528 Binding-protein-dependent transport system inner membrane component ABU16_0227 PF00571 CBS domain ABU16_0227 PF00005 ABC transporter ABU16_0228 PF12802 MarR family ABU16_0229 PF01914 MarC family integral membrane protein ABU16_0230 PF11724 YvbH-like oligomerisation region ABU16_0230 PF08000 Bacterial PH domain ABU16_0232 PF13240 zinc-ribbon domain ABU16_0233 PF00583 Acetyltransferase (GNAT) family ABU16_0234 PF03952 Enolase, N-terminal domain ABU16_0234 PF00113 Enolase, C-terminal TIM barrel domain ABU16_0235 PF01676 Metalloenzyme superfamily ABU16_0235 PF06415 BPG-independent PGAM N-terminus (iPGM_N) ABU16_0236 PF00121 Triosephosphate isomerase ABU16_0237 PF00162 Phosphoglycerate kinase ABU16_0238 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain ABU16_0238 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain ABU16_0239 PF04198 Putative sugar-binding domain ABU16_0240 PF00083 Sugar (and other) transporter ABU16_0241 PF00392 Bacterial regulatory proteins, gntR family ABU16_0242 PF00296 Luciferase-like monooxygenase ABU16_0243 PF03466 LysR substrate binding domain ABU16_0243 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABU16_0244 PF00892 EamA-like transporter family ABU16_0245 PF00324 Amino acid permease ABU16_0246 PF00704 Glycosyl hydrolases family 18 ABU16_0247 PF02589 LUD domain ABU16_0248 PF02589 LUD domain ABU16_0248 PF13183 4Fe-4S dicluster domain ABU16_0248 PF11870 Domain of unknown function (DUF3390) ABU16_0249 PF02754 Cysteine-rich domain ABU16_0250 PF00072 Response regulator receiver domain ABU16_0250 PF00196 Bacterial regulatory proteins, luxR family ABU16_0251 PF07730 Histidine kinase ABU16_0251 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABU16_0253 PF00005 ABC transporter ABU16_0255 PF12697 Alpha/beta hydrolase family ABU16_0256 PF13426 PAS domain ABU16_0256 PF07228 Stage II sporulation protein E (SpoIIE) ABU16_0257 PF07745 Glycosyl hydrolase family 53 ABU16_0258 PF02449 Beta-galactosidase ABU16_0258 PF08532 Beta-galactosidase trimerisation domain ABU16_0258 PF08533 Beta-galactosidase C-terminal domain ABU16_0259 PF00528 Binding-protein-dependent transport system inner membrane component ABU16_0260 PF00528 Binding-protein-dependent transport system inner membrane component ABU16_0261 PF13416 Bacterial extracellular solute-binding protein ABU16_0262 PF00356 Bacterial regulatory proteins, lacI family ABU16_0263 PF07729 FCD domain ABU16_0263 PF00392 Bacterial regulatory proteins, gntR family ABU16_0264 PF02652 L-lactate permease ABU16_0265 PF04963 Sigma-54 factor, core binding domain ABU16_0265 PF04552 Sigma-54, DNA binding domain ABU16_0265 PF00309 Sigma-54 factor, Activator interacting domain (AID) ABU16_0267 PF09628 YvfG protein ABU16_0268 PF04230 Polysaccharide pyruvyl transferase ABU16_0269 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family ABU16_0270 PF00132 Bacterial transferase hexapeptide (six repeats) ABU16_0270 PF17836 PglD N-terminal domain ABU16_0271 PF02397 Bacterial sugar transferase ABU16_0272 PF01943 Polysaccharide biosynthesis protein ABU16_0272 PF14667 Polysaccharide biosynthesis C-terminal domain ABU16_0273 PF00535 Glycosyl transferase family 2 ABU16_0274 PF04230 Polysaccharide pyruvyl transferase ABU16_0275 PF00535 Glycosyl transferase family 2 ABU16_0277 PF00534 Glycosyl transferases group 1 ABU16_0277 PF13439 Glycosyltransferase Family 4 ABU16_0278 PF00535 Glycosyl transferase family 2 ABU16_0279 PF00534 Glycosyl transferases group 1 ABU16_0279 PF13439 Glycosyltransferase Family 4 ABU16_0280 PF02719 Polysaccharide biosynthesis protein ABU16_0281 PF13614 AAA domain ABU16_0282 PF02706 Chain length determinant protein ABU16_0283 PF08671 Anti-repressor SinI ABU16_0283 PF01381 Helix-turn-helix ABU16_0284 PF00135 Carboxylesterase family ABU16_0286 PF05870 Phenolic acid decarboxylase (PAD) ABU16_0289 PF01177 Asp/Glu/Hydantoin racemase ABU16_0290 PF11954 Domain of unknown function (DUF3471) ABU16_0290 PF00144 Beta-lactamase ABU16_0291 PF02435 Levansucrase/Invertase ABU16_0292 PF00251 Glycosyl hydrolases family 32 N-terminal domain ABU16_0292 PF08244 Glycosyl hydrolases family 32 C terminal ABU16_0293 PF13520 Amino acid permease ABU16_0294 PF00440 Bacterial regulatory proteins, tetR family ABU16_0294 PF17934 Tetracyclin repressor-like, C-terminal domain ABU16_0295 PF00893 Small Multidrug Resistance protein ABU16_0296 PF00893 Small Multidrug Resistance protein ABU16_0297 PF11553 Protein of unknown function (DUF3231) ABU16_0298 PF08031 Berberine and berberine like ABU16_0298 PF01565 FAD binding domain ABU16_0299 PF01734 Patatin-like phospholipase ABU16_0300 PF00574 Clp protease ABU16_0301 PF13419 Haloacid dehalogenase-like hydrolase ABU16_0302 PF16657 Maltogenic Amylase, C-terminal domain ABU16_0302 PF00128 Alpha amylase, catalytic domain ABU16_0303 PF03636 Glycosyl hydrolase family 65, N-terminal domain ABU16_0303 PF03632 Glycosyl hydrolase family 65 central catalytic domain ABU16_0303 PF03633 Glycosyl hydrolase family 65, C-terminal domain ABU16_0304 PF06691 Protein of unknown function (DUF1189) ABU16_0305 PF00528 Binding-protein-dependent transport system inner membrane component ABU16_0306 PF00528 Binding-protein-dependent transport system inner membrane component ABU16_0307 PF13416 Bacterial extracellular solute-binding protein ABU16_0308 PF02903 Alpha amylase, N-terminal ig-like domain ABU16_0308 PF00128 Alpha amylase, catalytic domain ABU16_0309 PF00356 Bacterial regulatory proteins, lacI family ABU16_0310 PF03641 Possible lysine decarboxylase ABU16_0311 PF03819 MazG nucleotide pyrophosphohydrolase domain ABU16_0312 PF01740 STAS domain ABU16_0312 PF00916 Sulfate permease family ABU16_0313 PF00484 Carbonic anhydrase ABU16_0314 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain ABU16_0314 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain ABU16_0315 PF02687 FtsX-like permease family ABU16_0316 PF00005 ABC transporter ABU16_0317 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABU16_0318 PF00072 Response regulator receiver domain ABU16_0318 PF00486 Transcriptional regulatory protein, C terminal ABU16_0320 PF00797 N-acetyltransferase ABU16_0321 PF00381 PTS HPr component phosphorylation site ABU16_0322 PF14527 WhiA LAGLIDADG-like domain ABU16_0322 PF10298 WhiA N-terminal LAGLIDADG-like domain ABU16_0322 PF02650 WhiA C-terminal HTH domain ABU16_0323 PF01933 Uncharacterised protein family UPF0052 ABU16_0324 PF03668 P-loop ATPase protein family ABU16_0325 PF00293 NUDIX domain ABU16_0326 PF07992 Pyridine nucleotide-disulphide oxidoreductase ABU16_0327 PF00877 NlpC/P60 family ABU16_0329 PF00005 ABC transporter ABU16_0329 PF00664 ABC transporter transmembrane region ABU16_0333 PF01502 Phosphoribosyl-AMP cyclohydrolase ABU16_0333 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase ABU16_0334 PF00977 Histidine biosynthesis protein ABU16_0335 PF00977 Histidine biosynthesis protein ABU16_0336 PF00117 Glutamine amidotransferase class-I ABU16_0337 PF00475 Imidazoleglycerol-phosphate dehydratase ABU16_0338 PF00815 Histidinol dehydrogenase ABU16_0339 PF01634 ATP phosphoribosyltransferase ABU16_0340 PF13393 Histidyl-tRNA synthetase ABU16_0341 PF13529 Peptidase_C39 like family ABU16_0342 PF03211 Pectate lyase ABU16_0343 PF14602 Hexapeptide repeat of succinyl-transferase ABU16_0344 PF13419 Haloacid dehalogenase-like hydrolase ABU16_0345 PF07670 Nucleoside recognition ABU16_0346 PF01790 Prolipoprotein diacylglyceryl transferase ABU16_0347 PF07475 HPr Serine kinase C-terminal domain ABU16_0347 PF02603 HPr Serine kinase N terminus ABU16_0348 PF01979 Amidohydrolase family ABU16_0349 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase ABU16_0351 PF00149 Calcineurin-like phosphoesterase ABU16_0352 PF01047 MarR family ABU16_0353 PF00067 Cytochrome P450 ABU16_0354 PF16715 Cyclodipeptide synthase ABU16_0356 PF01047 MarR family ABU16_0357 PF07690 Major Facilitator Superfamily ABU16_0358 PF04020 Mycobacterial 4 TMS phage holin, superfamily IV ABU16_0359 PF04024 PspC domain ABU16_0360 PF13349 Putative adhesin ABU16_0363 PF00700 Bacterial flagellin C-terminal helical region ABU16_0364 PF00005 ABC transporter ABU16_0364 PF17755 UvrA DNA-binding domain ABU16_0364 PF17760 UvrA interaction domain ABU16_0365 PF12344 Ultra-violet resistance protein B ABU16_0365 PF04851 Type III restriction enzyme, res subunit ABU16_0365 PF00271 Helicase conserved C-terminal domain ABU16_0365 PF17757 UvrB interaction domain ABU16_0365 PF02151 UvrB/uvrC motif ABU16_0366 PF09964 Uncharacterized protein conserved in bacteria (DUF2198) ABU16_0368 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain ABU16_0368 PF00391 PEP-utilising enzyme, mobile domain ABU16_0369 PF00440 Bacterial regulatory proteins, tetR family ABU16_0370 PF07690 Major Facilitator Superfamily ABU16_0371 PF17820 PDZ domain ABU16_0372 PF17423 Swarming motility protein ABU16_0373 PF03572 Peptidase family S41 ABU16_0373 PF01471 Putative peptidoglycan binding domain ABU16_0373 PF17820 PDZ domain ABU16_0374 PF18075 FtsX extracellular domain ABU16_0374 PF02687 FtsX-like permease family ABU16_0375 PF00005 ABC transporter ABU16_0376 PF13442 Cytochrome C oxidase, cbb3-type, subunit III ABU16_0377 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) ABU16_0377 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 ABU16_0378 PF03462 PCRF domain ABU16_0378 PF00472 RF-1 domain ABU16_0379 PF02810 SEC-C motif ABU16_0379 PF07517 SecA DEAD-like domain ABU16_0379 PF01043 SecA preprotein cross-linking domain ABU16_0379 PF07516 SecA Wing and Scaffold domain ABU16_0380 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus ABU16_0380 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein ABU16_0383 PF02561 Flagellar protein FliS ABU16_0384 PF02465 Flagellar hook-associated protein 2 N-terminus ABU16_0384 PF07196 Flagellin hook IN motif ABU16_0384 PF07195 Flagellar hook-associated protein 2 C-terminus ABU16_0385 PF03646 FlaG protein ABU16_0386 PF00669 Bacterial flagellin N-terminal helical region ABU16_0386 PF00700 Bacterial flagellin C-terminal helical region ABU16_0387 PF02599 Global regulator protein family ABU16_0388 PF02623 FliW protein ABU16_0390 PF00669 Bacterial flagellin N-terminal helical region ABU16_0390 PF00700 Bacterial flagellin C-terminal helical region ABU16_0391 PF06429 Flagellar basal body rod FlgEFG protein C-terminal ABU16_0391 PF00460 Flagella basal body rod protein ABU16_0392 PF05130 FlgN protein ABU16_0393 PF04316 Anti-sigma-28 factor, FlgM ABU16_0396 PF10719 Late competence development protein ComFB ABU16_0397 PF04851 Type III restriction enzyme, res subunit ABU16_0397 PF00271 Helicase conserved C-terminal domain ABU16_0398 PF02645 Uncharacterised protein, DegV family COG1307 ABU16_0399 PF00072 Response regulator receiver domain ABU16_0399 PF00196 Bacterial regulatory proteins, luxR family ABU16_0400 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABU16_0400 PF07730 Histidine kinase ABU16_0400 PF05384 Sensor protein DegS ABU16_0401 PF01205 Uncharacterized protein family UPF0029 ABU16_0401 PF09186 Domain of unknown function (DUF1949) ABU16_0402 PF03816 Cell envelope-related transcriptional attenuator domain ABU16_0403 PF00953 Glycosyl transferase family 4 ABU16_0405 PF00535 Glycosyl transferase family 2 ABU16_0406 PF02706 Chain length determinant protein ABU16_0407 PF04932 O-Antigen ligase ABU16_0408 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain ABU16_0408 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain ABU16_0408 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain ABU16_0409 PF13439 Glycosyltransferase Family 4 ABU16_0409 PF00534 Glycosyl transferases group 1 ABU16_0410 PF14667 Polysaccharide biosynthesis C-terminal domain ABU16_0410 PF01943 Polysaccharide biosynthesis protein ABU16_0411 PF02397 Bacterial sugar transferase ABU16_0412 PF01520 N-acetylmuramoyl-L-alanine amidase ABU16_0412 PF04122 Putative cell wall binding repeat 2 ABU16_0413 PF08486 Stage II sporulation protein ABU16_0413 PF04122 Putative cell wall binding repeat 2 ABU16_0415 PF03816 Cell envelope-related transcriptional attenuator domain ABU16_0416 PF02350 UDP-N-acetylglucosamine 2-epimerase ABU16_0417 PF00483 Nucleotidyl transferase ABU16_0418 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase ABU16_0418 PF00535 Glycosyl transferase family 2 ABU16_0419 PF00535 Glycosyl transferase family 2 ABU16_0421 PF00483 Nucleotidyl transferase ABU16_0422 PF00005 ABC transporter ABU16_0423 PF01061 ABC-2 type transporter ABU16_0424 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase ABU16_0425 PF00534 Glycosyl transferases group 1 ABU16_0425 PF09318 Glycosyl transferase 1 domain A ABU16_0426 PF01467 Cytidylyltransferase-like ABU16_0427 PF03808 Glycosyl transferase WecB/TagA/CpsF family ABU16_0428 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase ABU16_0430 PF08239 Bacterial SH3 domain ABU16_0430 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase ABU16_0430 PF05036 Sporulation related domain ABU16_0431 PF01238 Phosphomannose isomerase type I ABU16_0433 PF03323 Bacillus/Clostridium GerA spore germination protein ABU16_0434 PF03845 Spore germination protein ABU16_0435 PF05504 Spore germination B3/ GerAC like, C-terminal ABU16_0436 PF00083 Sugar (and other) transporter ABU16_0437 PF03816 Cell envelope-related transcriptional attenuator domain ABU16_0439 PF00877 NlpC/P60 family ABU16_0441 PF09587 Bacterial capsule synthesis protein PGA_cap ABU16_0442 PF14102 Capsule biosynthesis CapC ABU16_0443 PF08245 Mur ligase middle domain ABU16_0445 PF00356 Bacterial regulatory proteins, lacI family ABU16_0446 PF00294 pfkB family carbohydrate kinase ABU16_0447 PF05025 RbsD / FucU transport protein family ABU16_0448 PF00005 ABC transporter ABU16_0449 PF02653 Branched-chain amino acid transport system / permease component ABU16_0450 PF13407 Periplasmic binding protein domain ABU16_0451 PF08239 Bacterial SH3 domain ABU16_0452 PF13031 Protein of unknown function (DUF3892) ABU16_0453 PF02525 Flavodoxin-like fold ABU16_0454 PF03306 Alpha-acetolactate decarboxylase ABU16_0455 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain ABU16_0455 PF00205 Thiamine pyrophosphate enzyme, central domain ABU16_0455 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain ABU16_0456 PF03466 LysR substrate binding domain ABU16_0456 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABU16_0457 PF02040 Arsenical pump membrane protein ABU16_0460 PF08757 CotH kinase protein ABU16_0461 PF01613 Flavin reductase like domain ABU16_0462 PF13789 Domain of unknown function (DUF4181) ABU16_0464 PF13404 AsnC-type helix-turn-helix domain ABU16_0464 PF01037 Lrp/AsnC ligand binding domain ABU16_0465 PF02417 Chromate transporter ABU16_0466 PF02417 Chromate transporter ABU16_0468 PF03358 NADPH-dependent FMN reductase ABU16_0469 PF03466 LysR substrate binding domain ABU16_0469 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABU16_0470 PF04493 Endonuclease V ABU16_0471 PF04740 LXG domain of WXG superfamily ABU16_0471 PF14449 Pre-toxin TG ABU16_0471 PF14431 YwqJ-like deaminase ABU16_0473 PF16888 Domain of unknown function (DUF5082) ABU16_0475 PF09234 Domain of unknown function (DUF1963) ABU16_0476 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain ABU16_0476 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain ABU16_0476 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain ABU16_0478 PF13614 AAA domain ABU16_0479 PF13807 G-rich domain on putative tyrosine kinase ABU16_0479 PF02706 Chain length determinant protein ABU16_0481 PF04434 SWIM zinc finger ABU16_0482 PF12419 SNF2 Helicase protein ABU16_0482 PF00271 Helicase conserved C-terminal domain ABU16_0482 PF00176 SNF2 family N-terminal domain ABU16_0484 PF00455 DeoR C terminal sensor domain ABU16_0484 PF08220 DeoR-like helix-turn-helix domain ABU16_0485 PF00436 Single-strand binding protein family ABU16_0487 PF14183 YwpF-like protein ABU16_0489 PF04203 Sortase domain ABU16_0491 PF06580 Histidine kinase ABU16_0491 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABU16_0492 PF01741 Large-conductance mechanosensitive channel, MscL ABU16_0493 PF07977 FabA-like domain ABU16_0494 PF18801 response regulator aspartate phosphatase H, N terminal ABU16_0495 PF00460 Flagella basal body rod protein ABU16_0495 PF06429 Flagellar basal body rod FlgEFG protein C-terminal ABU16_0496 PF06429 Flagellar basal body rod FlgEFG protein C-terminal ABU16_0496 PF00460 Flagella basal body rod protein ABU16_0498 PF12116 Stage III sporulation protein D ABU16_0499 PF01047 MarR family ABU16_0500 PF07690 Major Facilitator Superfamily ABU16_0501 PF13229 Right handed beta helix region ABU16_0502 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin ABU16_0503 PF07690 Major Facilitator Superfamily ABU16_0504 PF00857 Isochorismatase family ABU16_0506 PF00909 Ammonium Transporter Family ABU16_0507 PF00543 Nitrogen regulatory protein P-II ABU16_0508 PF01569 PAP2 superfamily ABU16_0509 PF04892 VanZ like family ABU16_0510 PF01551 Peptidase family M23 ABU16_0511 PF00583 Acetyltransferase (GNAT) family ABU16_0512 PF17319 Family of unknown function (DUF5362) ABU16_0514 PF17370 Family of unknown function (DUF5392) ABU16_0516 PF13091 PLD-like domain ABU16_0516 PF13396 Phospholipase_D-nuclease N-terminal ABU16_0517 PF13411 MerR HTH family regulatory protein ABU16_0517 PF07739 TipAS antibiotic-recognition domain ABU16_0518 PF17319 Family of unknown function (DUF5362) ABU16_0519 PF13460 NAD(P)H-binding ABU16_0520 PF02082 Transcriptional regulator ABU16_0521 PF01979 Amidohydrolase family ABU16_0521 PF00449 Urease alpha-subunit, N-terminal domain ABU16_0522 PF00699 Urease beta subunit ABU16_0523 PF00547 Urease, gamma subunit ABU16_0525 PF05532 CsbD-like ABU16_0528 PF17874 MalT-like TPR region ABU16_0528 PF18801 response regulator aspartate phosphatase H, N terminal ABU16_0529 PF04055 Radical SAM superfamily ABU16_0529 PF06463 Molybdenum Cofactor Synthesis C ABU16_0530 PF02634 FdhD/NarQ family ABU16_0532 PF00092 von Willebrand factor type A domain ABU16_0534 PF00092 von Willebrand factor type A domain ABU16_0536 PF08486 Stage II sporulation protein ABU16_0537 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) ABU16_0538 PF08680 TATA-box binding ABU16_0539 PF06612 Protein of unknown function (DUF1146) ABU16_0541 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain ABU16_0541 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain ABU16_0542 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain ABU16_0542 PF02874 ATP synthase alpha/beta family, beta-barrel domain ABU16_0543 PF00231 ATP synthase ABU16_0544 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain ABU16_0544 PF02874 ATP synthase alpha/beta family, beta-barrel domain ABU16_0544 PF00306 ATP synthase alpha/beta chain, C terminal domain ABU16_0545 PF00213 ATP synthase delta (OSCP) subunit ABU16_0546 PF00430 ATP synthase B/B' CF(0) ABU16_0547 PF00137 ATP synthase subunit C ABU16_0548 PF00119 ATP synthase A chain ABU16_0549 PF03899 ATP synthase I chain ABU16_0551 PF00464 Serine hydroxymethyltransferase ABU16_0552 PF04260 Protein of unknown function (DUF436) ABU16_0553 PF02502 Ribose/Galactose Isomerase ABU16_0555 PF01451 Low molecular weight phosphotyrosine protein phosphatase ABU16_0556 PF02659 Putative manganese efflux pump ABU16_0557 PF01300 Telomere recombination ABU16_0557 PF03481 Putative GTP-binding controlling metal-binding ABU16_0559 PF09551 Stage II sporulation protein R (spore_II_R) ABU16_0560 PF17094 Uncharacterised protein family (UPF0715) ABU16_0561 PF17247 Family of unknown function (DUF5316) ABU16_0562 PF17827 PrmC N-terminal domain ABU16_0562 PF05175 Methyltransferase small domain ABU16_0563 PF00472 RF-1 domain ABU16_0563 PF03462 PCRF domain ABU16_0564 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily ABU16_0565 PF13411 MerR HTH family regulatory protein ABU16_0566 PF03547 Membrane transport protein ABU16_0567 PF03949 Malic enzyme, NAD binding domain ABU16_0567 PF00390 Malic enzyme, N-terminal domain ABU16_0568 PF00265 Thymidine kinase ABU16_0569 PF01197 Ribosomal protein L31 ABU16_0570 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain ABU16_0570 PF07497 Rho termination factor, RNA-binding domain ABU16_0570 PF07498 Rho termination factor, N-terminal domain ABU16_0572 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded ABU16_0573 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) ABU16_0574 PF00923 Transaldolase/Fructose-6-phosphate aldolase ABU16_0575 PF01116 Fructose-bisphosphate aldolase class-II ABU16_0576 PF00072 Response regulator receiver domain ABU16_0577 PF10740 Domain of unknown function (DUF2529) ABU16_0578 PF06418 CTP synthase N-terminus ABU16_0578 PF00117 Glutamine amidotransferase class-I ABU16_0579 PF05066 HB1, ASXL, restriction endonuclease HTH domain ABU16_0581 PF02770 Acyl-CoA dehydrogenase, middle domain ABU16_0581 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ABU16_0581 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ABU16_0582 PF02754 Cysteine-rich domain ABU16_0582 PF13183 4Fe-4S dicluster domain ABU16_0583 PF13091 PLD-like domain ABU16_0584 PF03851 UV-endonuclease UvdE ABU16_0586 PF01872 RibD C-terminal domain ABU16_0587 PF00664 ABC transporter transmembrane region ABU16_0587 PF00005 ABC transporter ABU16_0588 PF13091 PLD-like domain ABU16_0588 PF13396 Phospholipase_D-nuclease N-terminal ABU16_0590 PF02665 Nitrate reductase gamma subunit ABU16_0591 PF02613 Nitrate reductase delta subunit ABU16_0592 PF13247 4Fe-4S dicluster domain ABU16_0592 PF14711 Respiratory nitrate reductase beta C-terminal ABU16_0593 PF00384 Molybdopterin oxidoreductase ABU16_0593 PF01568 Molydopterin dinucleotide binding domain ABU16_0593 PF14710 Respiratory nitrate reductase alpha N-terminal ABU16_0596 PF14256 YwiC-like protein ABU16_0597 PF00325 Bacterial regulatory proteins, crp family ABU16_0597 PF00027 Cyclic nucleotide-binding domain ABU16_0598 PF07690 Major Facilitator Superfamily ABU16_0599 PF05746 DALR anticodon binding domain ABU16_0599 PF03485 Arginyl tRNA synthetase N terminal domain ABU16_0599 PF00750 tRNA synthetases class I (R) ABU16_0600 PF09148 Domain of unknown function (DUF1934) ABU16_0601 PF11420 Bacteriocin subtilosin A ABU16_0602 PF05402 Coenzyme PQQ synthesis protein D (PqqD) ABU16_0602 PF04055 Radical SAM superfamily ABU16_0602 PF13186 Iron-sulfur cluster-binding domain ABU16_0604 PF00005 ABC transporter ABU16_0606 PF05193 Peptidase M16 inactive domain ABU16_0607 PF00675 Insulinase (Peptidase family M16) ABU16_0612 PF18801 response regulator aspartate phosphatase H, N terminal ABU16_0613 PF04073 Aminoacyl-tRNA editing domain ABU16_0614 PF00491 Arginase family ABU16_0615 PF17284 Spermidine synthase tetramerisation domain ABU16_0616 PF00912 Transglycosylase ABU16_0616 PF00905 Penicillin binding protein transpeptidase domain ABU16_0617 PF08741 YwhD family ABU16_0618 PF02163 Peptidase family M50 ABU16_0619 PF01361 Tautomerase enzyme ABU16_0620 PF01047 MarR family ABU16_0621 PF03129 Anticodon binding domain ABU16_0621 PF02824 TGS domain ABU16_0621 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) ABU16_0621 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain ABU16_0623 PF07690 Major Facilitator Superfamily ABU16_0624 PF02082 Transcriptional regulator ABU16_0626 PF01966 HD domain ABU16_0627 PF07293 Protein of unknown function (DUF1450) ABU16_0629 PF00892 EamA-like transporter family ABU16_0630 PF03099 Biotin/lipoate A/B protein ligase family ABU16_0631 PF03466 LysR substrate binding domain ABU16_0631 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABU16_0632 PF01515 Phosphate acetyl/butaryl transferase ABU16_0635 PF00155 Aminotransferase class I and II ABU16_0636 PF07690 Major Facilitator Superfamily ABU16_0639 PF07883 Cupin domain ABU16_0642 PF07690 Major Facilitator Superfamily ABU16_0643 PF00324 Amino acid permease ABU16_0644 PF01546 Peptidase family M20/M25/M40 ABU16_0645 PF00171 Aldehyde dehydrogenase family ABU16_0646 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain ABU16_0646 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase ABU16_0647 PF17735 Biofilm surface layer A ABU16_0648 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase ABU16_0649 PF04321 RmlD substrate binding domain ABU16_0650 PF16363 GDP-mannose 4,6 dehydratase ABU16_0651 PF00483 Nucleotidyl transferase ABU16_0652 PF04101 Glycosyltransferase family 28 C-terminal domain ABU16_0653 PF02348 Cytidylyltransferase ABU16_0654 PF03102 NeuB family ABU16_0654 PF08666 SAF domain ABU16_0655 PF00583 Acetyltransferase (GNAT) family ABU16_0656 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family ABU16_0657 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase ABU16_0658 PF00535 Glycosyl transferase family 2 ABU16_0660 PF09671 Spore coat protein (Spore_GerQ) ABU16_0661 PF04241 Protein of unknown function (DUF423) ABU16_0662 PF00860 Permease family ABU16_0663 PF17261 Family of unknown function (DUF5327) ABU16_0665 PF00171 Aldehyde dehydrogenase family ABU16_0666 PF03167 Uracil DNA glycosylase superfamily ABU16_0667 PF00535 Glycosyl transferase family 2 ABU16_0670 PF03551 Transcriptional regulator PadR-like family ABU16_0671 PF08543 Phosphomethylpyrimidine kinase ABU16_0673 PF08244 Glycosyl hydrolases family 32 C terminal ABU16_0673 PF00251 Glycosyl hydrolases family 32 N-terminal domain ABU16_0674 PF00367 phosphotransferase system, EIIB ABU16_0674 PF02378 Phosphotransferase system, EIIC ABU16_0675 PF01226 Formate/nitrite transporter ABU16_0676 PF00874 PRD domain ABU16_0676 PF03123 CAT RNA binding domain ABU16_0678 PF00082 Subtilase family ABU16_0678 PF05922 Peptidase inhibitor I9 ABU16_0678 PF02225 PA domain ABU16_0678 PF13860 FlgD Ig-like domain ABU16_0679 PF00296 Luciferase-like monooxygenase ABU16_0680 PF00881 Nitroreductase family ABU16_0681 PF01098 Cell cycle protein ABU16_0682 PF17368 Spore morphogenesis and germination YwcE ABU16_0683 PF03626 Prokaryotic Cytochrome C oxidase subunit IV ABU16_0684 PF00510 Cytochrome c oxidase subunit III ABU16_0685 PF00115 Cytochrome C and Quinol oxidase polypeptide I ABU16_0686 PF02790 Cytochrome C oxidase subunit II, transmembrane domain ABU16_0686 PF00116 Cytochrome C oxidase subunit II, periplasmic domain ABU16_0687 PF04226 Transglycosylase associated protein ABU16_0688 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain ABU16_0688 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain ABU16_0689 PF10509 Galactokinase galactose-binding signature ABU16_0689 PF08544 GHMP kinases C terminal ABU16_0689 PF00288 GHMP kinases N terminal domain ABU16_0690 PF04138 GtrA-like protein ABU16_0691 PF00440 Bacterial regulatory proteins, tetR family ABU16_0692 PF08671 Anti-repressor SinI ABU16_0693 PF04341 Protein of unknown function, DUF485 ABU16_0694 PF00474 Sodium:solute symporter family ABU16_0695 PF01323 DSBA-like thioredoxin domain ABU16_0696 PF04261 Dyp-type peroxidase family ABU16_0696 PF10518 TAT (twin-arginine translocation) pathway signal sequence ABU16_0697 PF09375 Imelysin ABU16_0698 PF03239 Iron permease FTR1 family ABU16_0699 PF02581 Thiamine monophosphate synthase ABU16_0700 PF02110 Hydroxyethylthiazole kinase family ABU16_0701 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABU16_0701 PF03466 LysR substrate binding domain ABU16_0702 PF03788 LrgA family ABU16_0703 PF04172 LrgB-like family ABU16_0704 PF12832 MFS_1 like family ABU16_0705 PF09962 Uncharacterized conserved protein (DUF2196) ABU16_0706 PF17785 PUA-like domain ABU16_0706 PF10672 S-adenosylmethionine-dependent methyltransferase ABU16_0708 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily ABU16_0710 PF10924 Protein of unknown function (DUF2711) ABU16_0711 PF02378 Phosphotransferase system, EIIC ABU16_0712 PF00082 Subtilase family ABU16_0713 PF02378 Phosphotransferase system, EIIC ABU16_0713 PF00367 phosphotransferase system, EIIB ABU16_0714 PF00874 PRD domain ABU16_0714 PF03123 CAT RNA binding domain ABU16_0715 PF01501 Glycosyl transferase family 8 ABU16_0716 PF09529 Integral membrane protein (intg_mem_TP0381) ABU16_0717 PF01047 MarR family ABU16_0718 PF01479 S4 domain ABU16_0718 PF00579 tRNA synthetases class I (W and Y) ABU16_0719 PF02225 PA domain ABU16_0719 PF04389 Peptidase family M28 ABU16_0720 PF04607 Region found in RelA / SpoT proteins ABU16_0721 PF01040 UbiA prenyltransferase family ABU16_0723 PF12459 D-Ala-teichoic acid biosynthesis protein ABU16_0724 PF00501 AMP-binding enzyme ABU16_0724 PF13193 AMP-binding enzyme C-terminal domain ABU16_0725 PF03062 MBOAT, membrane-bound O-acyltransferase family ABU16_0726 PF00550 Phosphopantetheine attachment site ABU16_0727 PF04914 DltD protein ABU16_0728 PF00106 short chain dehydrogenase ABU16_0729 PF01063 Amino-transferase class IV ABU16_0730 PF11975 Family 4 glycosyl hydrolase C-terminal domain ABU16_0730 PF02056 Family 4 glycosyl hydrolase ABU16_0731 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit ABU16_0732 PF02378 Phosphotransferase system, EIIC ABU16_0733 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit ABU16_0734 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 ABU16_0734 PF05043 Mga helix-turn-helix domain ABU16_0734 PF00874 PRD domain ABU16_0734 PF08279 HTH domain ABU16_0736 PF02245 Methylpurine-DNA glycosylase (MPG) ABU16_0737 PF06628 Catalase-related immune-responsive ABU16_0737 PF00199 Catalase ABU16_0738 PF07690 Major Facilitator Superfamily ABU16_0739 PF12679 ABC-2 family transporter protein ABU16_0740 PF13732 Domain of unknown function (DUF4162) ABU16_0740 PF00005 ABC transporter ABU16_0741 PF13396 Phospholipase_D-nuclease N-terminal ABU16_0743 PF17280 Family of unknown function (DUF5345) ABU16_0744 PF08281 Sigma-70, region 4 ABU16_0744 PF04542 Sigma-70 region 2 ABU16_0745 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin ABU16_0746 PF01256 Carbohydrate kinase ABU16_0748 PF00005 ABC transporter ABU16_0748 PF00664 ABC transporter transmembrane region ABU16_0749 PF00005 ABC transporter ABU16_0749 PF00664 ABC transporter transmembrane region ABU16_0750 PF02322 Cytochrome bd terminal oxidase subunit II ABU16_0751 PF01654 Cytochrome bd terminal oxidase subunit I ABU16_0752 PF03390 2-hydroxycarboxylate transporter family ABU16_0753 PF01435 Peptidase family M48 ABU16_0755 PF01522 Polysaccharide deacetylase ABU16_0756 PF00005 ABC transporter ABU16_0756 PF17912 MalK OB fold domain ABU16_0756 PF03459 TOBE domain ABU16_0757 PF13556 PucR C-terminal helix-turn-helix domain ABU16_0758 PF00171 Aldehyde dehydrogenase family ABU16_0759 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) ABU16_0759 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 ABU16_0760 PF11611 Domain of unknown function (DUF4352) ABU16_0761 PF16363 GDP-mannose 4,6 dehydratase ABU16_0764 PF07730 Histidine kinase ABU16_0765 PF00072 Response regulator receiver domain ABU16_0765 PF00196 Bacterial regulatory proteins, luxR family ABU16_0766 PF01546 Peptidase family M20/M25/M40 ABU16_0766 PF07687 Peptidase dimerisation domain ABU16_0769 PF04525 LURP-one-related ABU16_0770 PF01717 Cobalamin-independent synthase, Catalytic domain ABU16_0771 PF01717 Cobalamin-independent synthase, Catalytic domain ABU16_0773 PF01144 Coenzyme A transferase ABU16_0774 PF01144 Coenzyme A transferase ABU16_0777 PF08241 Methyltransferase domain ABU16_0779 PF07662 Na+ dependent nucleoside transporter C-terminus ABU16_0779 PF01773 Na+ dependent nucleoside transporter N-terminus ABU16_0782 PF06628 Catalase-related immune-responsive ABU16_0782 PF18011 C-terminal domain found in long catalases ABU16_0782 PF00199 Catalase ABU16_0783 PF03600 Citrate transporter ABU16_0784 PF00722 Glycosyl hydrolases family 16 ABU16_0786 PF03123 CAT RNA binding domain ABU16_0786 PF00874 PRD domain ABU16_0789 PF11700 Vacuole effluxer Atg22 like ABU16_0790 PF00270 DEAD/DEAH box helicase ABU16_0790 PF00271 Helicase conserved C-terminal domain ABU16_0790 PF03880 DbpA RNA binding domain ABU16_0791 PF13472 GDSL-like Lipase/Acylhydrolase family ABU16_0794 PF14176 YxiJ-like protein ABU16_0795 PF10898 Protein of unknown function (DUF2716) ABU16_0803 PF05593 RHS Repeat ABU16_0804 PF00892 EamA-like transporter family ABU16_0805 PF00582 Universal stress protein family ABU16_0806 PF00232 Glycosyl hydrolase family 1 ABU16_0807 PF02378 Phosphotransferase system, EIIC ABU16_0807 PF00367 phosphotransferase system, EIIB ABU16_0807 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 ABU16_0808 PF18593 CdiI immunity protein ABU16_0810 PF04740 LXG domain of WXG superfamily ABU16_0810 PF14449 Pre-toxin TG ABU16_0812 PF16888 Domain of unknown function (DUF5082) ABU16_0813 PF16369 C-terminal lipocalin-like domain ABU16_0813 PF04616 Glycosyl hydrolases family 43 ABU16_0815 PF09021 HutP ABU16_0816 PF00221 Aromatic amino acid lyase ABU16_0817 PF01175 Urocanase Rossmann-like domain ABU16_0817 PF17391 Urocanase N-terminal domain ABU16_0817 PF17392 Urocanase C-terminal domain ABU16_0818 PF01979 Amidohydrolase family ABU16_0819 PF00491 Arginase family ABU16_0820 PF00324 Amino acid permease ABU16_0821 PF02885 Glycosyl transferase family, helical bundle domain ABU16_0821 PF00591 Glycosyl transferase family, a/b domain ABU16_0821 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain ABU16_0822 PF07662 Na+ dependent nucleoside transporter C-terminus ABU16_0822 PF01773 Na+ dependent nucleoside transporter N-terminus ABU16_0823 PF01791 DeoC/LacD family aldolase ABU16_0825 PF04198 Putative sugar-binding domain ABU16_0826 PF06724 Domain of Unknown Function (DUF1206) ABU16_0827 PF04346 Ethanolamine utilisation protein, EutH ABU16_0828 PF03972 MmgE/PrpD family ABU16_0830 PF00005 ABC transporter ABU16_0831 PF00528 Binding-protein-dependent transport system inner membrane component ABU16_0832 PF00497 Bacterial extracellular solute-binding proteins, family 3 ABU16_0836 PF02275 Linear amide C-N hydrolases, choloylglycine hydrolase family ABU16_0839 PF11631 Protein of unknown function (DUF3255) ABU16_0843 PF01497 Periplasmic binding protein ABU16_0844 PF06486 Protein of unknown function (DUF1093) ABU16_0845 PF02687 FtsX-like permease family ABU16_0846 PF00005 ABC transporter ABU16_0847 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABU16_0848 PF00486 Transcriptional regulatory protein, C terminal ABU16_0848 PF00072 Response regulator receiver domain ABU16_0849 PF01116 Fructose-bisphosphate aldolase class-II ABU16_0850 PF01261 Xylose isomerase-like TIM barrel ABU16_0851 PF01261 Xylose isomerase-like TIM barrel ABU16_0852 PF01408 Oxidoreductase family, NAD-binding Rossmann fold ABU16_0852 PF02894 Oxidoreductase family, C-terminal alpha/beta domain ABU16_0853 PF07690 Major Facilitator Superfamily ABU16_0854 PF01261 Xylose isomerase-like TIM barrel ABU16_0855 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain ABU16_0855 PF00205 Thiamine pyrophosphate enzyme, central domain ABU16_0855 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain ABU16_0856 PF00294 pfkB family carbohydrate kinase ABU16_0857 PF04962 KduI/IolB family ABU16_0858 PF00171 Aldehyde dehydrogenase family ABU16_0859 PF08220 DeoR-like helix-turn-helix domain ABU16_0859 PF00455 DeoR C terminal sensor domain ABU16_0860 PF00248 Aldo/keto reductase family ABU16_0863 PF10850 Protein of unknown function (DUF2653) ABU16_0864 PF00083 Sugar (and other) transporter ABU16_0865 PF00183 Hsp90 protein ABU16_0868 PF00440 Bacterial regulatory proteins, tetR family ABU16_0869 PF00171 Aldehyde dehydrogenase family ABU16_0870 PF00583 Acetyltransferase (GNAT) family ABU16_0871 PF08007 Cupin superfamily protein ABU16_0872 PF08241 Methyltransferase domain ABU16_0873 PF05402 Coenzyme PQQ synthesis protein D (PqqD) ABU16_0875 PF00733 Asparagine synthase ABU16_0875 PF13537 Glutamine amidotransferase domain ABU16_0876 PF07690 Major Facilitator Superfamily ABU16_0877 PF13360 PQQ-like domain ABU16_0877 PF13570 PQQ-like domain ABU16_0877 PF01011 PQQ enzyme repeat ABU16_0878 PF17369 Family of unknown function (DUF5391) ABU16_0879 PF06271 RDD family ABU16_0880 PF04235 Protein of unknown function (DUF418) ABU16_0881 PF07883 Cupin domain ABU16_0882 PF00440 Bacterial regulatory proteins, tetR family ABU16_0883 PF00106 short chain dehydrogenase ABU16_0884 PF01047 MarR family ABU16_0885 PF03788 LrgA family ABU16_0886 PF04172 LrgB-like family ABU16_0887 PF04230 Polysaccharide pyruvyl transferase ABU16_0888 PF02595 Glycerate kinase family ABU16_0889 PF07729 FCD domain ABU16_0889 PF00392 Bacterial regulatory proteins, gntR family ABU16_0890 PF02782 FGGY family of carbohydrate kinases, C-terminal domain ABU16_0890 PF00370 FGGY family of carbohydrate kinases, N-terminal domain ABU16_0891 PF02447 GntP family permease ABU16_0892 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase ABU16_0892 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain ABU16_0893 PF00578 AhpC/TSA family ABU16_0894 PF13192 Thioredoxin domain ABU16_0894 PF07992 Pyridine nucleotide-disulphide oxidoreductase ABU16_0895 PF00232 Glycosyl hydrolase family 1 ABU16_0896 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 ABU16_0897 PF07702 UTRA domain ABU16_0897 PF00392 Bacterial regulatory proteins, gntR family ABU16_0900 PF00005 ABC transporter ABU16_0902 PF04055 Radical SAM superfamily ABU16_0904 PF06874 Firmicute fructose-1,6-bisphosphatase ABU16_0905 PF13476 AAA domain ABU16_0905 PF10088 Uncharacterised protein conserved in bacteria (DUF2326) ABU16_0907 PF00149 Calcineurin-like phosphoesterase ABU16_0908 PF02590 Predicted SPOUT methyltransferase ABU16_0910 PF00107 Zinc-binding dehydrogenase ABU16_0910 PF08240 Alcohol dehydrogenase GroES-like domain ABU16_0912 PF10852 Protein of unknown function (DUF2651) ABU16_0915 PF00583 Acetyltransferase (GNAT) family ABU16_0916 PF18801 response regulator aspartate phosphatase H, N terminal ABU16_0918 PF00491 Arginase family ABU16_0919 PF00324 Amino acid permease ABU16_0920 PF00202 Aminotransferase class-III ABU16_0921 PF13426 PAS domain ABU16_0921 PF00158 Sigma-54 interaction domain ABU16_0921 PF02954 Bacterial regulatory protein, Fis family ABU16_0922 PF00512 His Kinase A (phospho-acceptor) domain ABU16_0922 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABU16_0922 PF16736 Single Cache-like ABU16_0922 PF00989 PAS fold ABU16_0923 PF00486 Transcriptional regulatory protein, C terminal ABU16_0923 PF00072 Response regulator receiver domain ABU16_0927 PF13180 PDZ domain ABU16_0928 PF00753 Metallo-beta-lactamase superfamily ABU16_0929 PF09648 YycH protein ABU16_0930 PF07435 YycH protein ABU16_0931 PF00672 HAMP domain ABU16_0931 PF00512 His Kinase A (phospho-acceptor) domain ABU16_0931 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABU16_0931 PF13426 PAS domain ABU16_0932 PF00072 Response regulator receiver domain ABU16_0932 PF00486 Transcriptional regulatory protein, C terminal ABU16_0933 PF00709 Adenylosuccinate synthetase ABU16_0934 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily ABU16_0936 PF03796 DnaB-like helicase C terminal domain ABU16_0936 PF00772 DnaB-like helicase N terminal domain ABU16_0937 PF09954 Uncharacterized protein conserved in bacteria (DUF2188) ABU16_0939 PF14174 YycC-like protein ABU16_0940 PF07690 Major Facilitator Superfamily ABU16_0941 PF13231 Dolichyl-phosphate-mannose-protein mannosyltransferase ABU16_0942 PF03948 Ribosomal protein L9, C-terminal domain ABU16_0942 PF01281 Ribosomal protein L9, N-terminal domain ABU16_0943 PF02272 DHHA1 domain ABU16_0943 PF01368 DHH family ABU16_0944 PF09991 Predicted membrane protein (DUF2232) ABU16_0947 PF07875 Coat F domain ABU16_0948 PF01638 HxlR-like helix-turn-helix ABU16_0949 PF01368 DHH family ABU16_0949 PF02833 DHHA2 domain ABU16_0952 PF07690 Major Facilitator Superfamily ABU16_0953 PF13411 MerR HTH family regulatory protein ABU16_0953 PF06445 GyrI-like small molecule binding domain ABU16_0955 PF13474 SnoaL-like domain ABU16_0956 PF00805 Pentapeptide repeats (8 copies) ABU16_0957 PF07690 Major Facilitator Superfamily ABU16_0958 PF03466 LysR substrate binding domain ABU16_0958 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABU16_0959 PF13673 Acetyltransferase (GNAT) domain ABU16_0961 PF00753 Metallo-beta-lactamase superfamily ABU16_0963 PF01047 MarR family ABU16_0964 PF13673 Acetyltransferase (GNAT) domain ABU16_0966 PF00583 Acetyltransferase (GNAT) family ABU16_0967 PF04237 YjbR ABU16_0968 PF01872 RibD C-terminal domain ABU16_0969 PF07690 Major Facilitator Superfamily ABU16_0970 PF03190 Protein of unknown function, DUF255 ABU16_0971 PF02517 CPBP intramembrane metalloprotease ABU16_0972 PF00083 Sugar (and other) transporter ABU16_0973 PF12464 Maltose acetyltransferase ABU16_0973 PF14602 Hexapeptide repeat of succinyl-transferase ABU16_0974 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily ABU16_0975 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family ABU16_0975 PF00356 Bacterial regulatory proteins, lacI family ABU16_0976 PF03372 Endonuclease/Exonuclease/phosphatase family ABU16_0977 PF00436 Single-strand binding protein family ABU16_0978 PF01250 Ribosomal protein S6 ABU16_0979 PF01926 50S ribosome-binding GTPase ABU16_0979 PF06071 Protein of unknown function (DUF933) ABU16_0980 PF01568 Molydopterin dinucleotide binding domain ABU16_0980 PF04879 Molybdopterin oxidoreductase Fe4S4 domain ABU16_0980 PF00384 Molybdopterin oxidoreductase ABU16_0981 PF06107 Bacterial protein of unknown function (DUF951) ABU16_0983 PF06866 Protein of unknown function (DUF1256) ABU16_0984 PF17762 HTH domain found in ParB protein ABU16_0984 PF02195 ParB-like nuclease domain ABU16_0985 PF13614 AAA domain ABU16_0986 PF06713 Bacterial PH domain ABU16_0987 PF17762 HTH domain found in ParB protein ABU16_0987 PF02195 ParB-like nuclease domain ABU16_0988 PF02527 rRNA small subunit methyltransferase G ABU16_0989 PF01134 Glucose inhibited division protein A ABU16_0989 PF13932 GidA associated domain ABU16_0990 PF01926 50S ribosome-binding GTPase ABU16_0990 PF12631 MnmE helical domain ABU16_0990 PF10396 GTP-binding protein TrmE N-terminus ABU16_0991 PF14804 Jag N-terminus ABU16_0991 PF01424 R3H domain ABU16_0992 PF02096 60Kd inner membrane protein ABU16_0993 PF00825 Ribonuclease P ABU16_0994 PF08299 Bacterial dnaA protein helix-turn-helix ABU16_0994 PF00308 Bacterial dnaA protein ABU16_0994 PF11638 DnaA N-terminal domain ABU16_0995 PF02768 DNA polymerase III beta subunit, C-terminal domain ABU16_0995 PF02767 DNA polymerase III beta subunit, central domain ABU16_0995 PF00712 DNA polymerase III beta subunit, N-terminal domain ABU16_0997 PF02463 RecF/RecN/SMC N terminal domain ABU16_0998 PF04025 Domain of unknown function (DUF370) ABU16_0999 PF01751 Toprim domain ABU16_0999 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABU16_0999 PF00986 DNA gyrase B subunit, carboxyl terminus ABU16_0999 PF00204 DNA gyrase B ABU16_1001 PF00521 DNA gyrase/topoisomerase IV, subunit A ABU16_1001 PF03989 DNA gyrase C-terminal domain, beta-propeller ABU16_1002 PF14175 YaaC-like Protein ABU16_1003 PF00571 CBS domain ABU16_1003 PF00478 IMP dehydrogenase / GMP reductase domain ABU16_1004 PF00768 D-alanyl-D-alanine carboxypeptidase ABU16_1004 PF07943 Penicillin-binding protein 5, C-terminal domain ABU16_1005 PF01680 SOR/SNZ family ABU16_1006 PF01174 SNO glutamine amidotransferase family ABU16_1007 PF02403 Seryl-tRNA synthetase N-terminal domain ABU16_1007 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) ABU16_1008 PF01712 Deoxynucleoside kinase ABU16_1009 PF01712 Deoxynucleoside kinase ABU16_1010 PF00704 Glycosyl hydrolases family 18 ABU16_1010 PF01476 LysM domain ABU16_1011 PF00857 Isochorismatase family ABU16_1012 PF14437 MafB19-like deaminase ABU16_1013 PF12169 DNA polymerase III subunits gamma and tau domain III ABU16_1014 PF02575 YbaB/EbfC DNA-binding family ABU16_1015 PF13662 Toprim domain ABU16_1015 PF02132 RecR protein ABU16_1016 PF10704 Protein of unknown function (DUF2508) ABU16_1017 PF07441 SigmaK-factor processing regulatory protein BofA ABU16_1018 PF10764 Inhibitor of sigma-G Gin ABU16_1019 PF10112 5-bromo-4-chloroindolyl phosphate hydrolysis protein ABU16_1020 PF05816 Toxic anion resistance protein (TelA) ABU16_1021 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain ABU16_1021 PF01276 Orn/Lys/Arg decarboxylase, major domain ABU16_1022 PF02223 Thymidylate kinase ABU16_1023 PF06153 Cyclic-di-AMP receptor ABU16_1024 PF03885 Protein of unknown function (DUF327) ABU16_1025 PF09115 DNA polymerase III, delta subunit, C terminal ABU16_1026 PF04468 PSP1 C-terminal conserved region ABU16_1027 PF06156 Initiation control protein YabA ABU16_1028 PF05175 Methyltransferase small domain ABU16_1029 PF01541 GIY-YIG catalytic domain ABU16_1030 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases ABU16_1031 PF18277 AbrB C-terminal domain ABU16_1031 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin ABU16_1032 PF08264 Anticodon-binding domain of tRNA ABU16_1032 PF09334 tRNA synthetases class I (M) ABU16_1032 PF01588 Putative tRNA binding domain ABU16_1033 PF01026 TatD related DNase ABU16_1034 PF03990 G5-linked-Ubiquitin-like domain ABU16_1034 PF06725 3D domain ABU16_1034 PF07501 G5 domain ABU16_1035 PF13331 Domain of unknown function (DUF4093) ABU16_1035 PF13662 Toprim domain ABU16_1036 PF00398 Ribosomal RNA adenine dimethylase ABU16_1037 PF05582 YabG peptidase U57 ABU16_1038 PF06257 Biofilm formation stimulator VEG ABU16_1039 PF00269 Small, acid-soluble spore proteins, alpha/beta type ABU16_1040 PF08544 GHMP kinases C terminal ABU16_1040 PF00288 GHMP kinases N terminal domain ABU16_1041 PF09182 Bacterial purine repressor, N-terminal ABU16_1041 PF00156 Phosphoribosyl transferase domain ABU16_1042 PF01042 Endoribonuclease L-PSP ABU16_1043 PF04026 SpoVG ABU16_1045 PF00483 Nucleotidyl transferase ABU16_1045 PF00132 Bacterial transferase hexapeptide (six repeats) ABU16_1046 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase ABU16_1046 PF14572 Phosphoribosyl synthetase-associated domain ABU16_1047 PF01386 Ribosomal L25p family ABU16_1047 PF14693 Ribosomal protein TL5, C-terminal domain ABU16_1048 PF01195 Peptidyl-tRNA hydrolase ABU16_1049 PF10955 Protein of unknown function (DUF2757) ABU16_1050 PF00271 Helicase conserved C-terminal domain ABU16_1050 PF00270 DEAD/DEAH box helicase ABU16_1050 PF17757 UvrB interaction domain ABU16_1050 PF03461 TRCF domain ABU16_1050 PF02559 CarD-like/TRCF domain ABU16_1051 PF15714 Stage V sporulation protein T C-terminal, transcription factor ABU16_1051 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin ABU16_1052 PF01943 Polysaccharide biosynthesis protein ABU16_1052 PF14667 Polysaccharide biosynthesis C-terminal domain ABU16_1053 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases ABU16_1053 PF03819 MazG nucleotide pyrophosphohydrolase domain ABU16_1054 PF01479 S4 domain ABU16_1055 PF07873 YabP family ABU16_1056 PF09578 Spore cortex protein YabQ (Spore_YabQ) ABU16_1057 PF04977 Septum formation initiator ABU16_1058 PF00575 S1 RNA binding domain ABU16_1059 PF07228 Stage II sporulation protein E (SpoIIE) ABU16_1060 PF00092 von Willebrand factor type A domain ABU16_1061 PF00069 Protein kinase domain ABU16_1062 PF01171 PP-loop family ABU16_1062 PF09179 TilS substrate binding domain ABU16_1062 PF11734 TilS substrate C-terminal domain ABU16_1064 PF00004 ATPase family associated with various cellular activities (AAA) ABU16_1064 PF01434 Peptidase family M41 ABU16_1064 PF17862 AAA+ lid domain ABU16_1064 PF06480 FtsH Extracellular ABU16_1065 PF03309 Type III pantothenate kinase ABU16_1066 PF01430 Hsp33 protein ABU16_1067 PF13145 PPIC-type PPIASE domain ABU16_1068 PF00291 Pyridoxal-phosphate dependent enzyme ABU16_1069 PF04715 Anthranilate synthase component I, N terminal region ABU16_1069 PF00425 chorismate binding enzyme ABU16_1070 PF00117 Glutamine amidotransferase class-I ABU16_1071 PF01063 Amino-transferase class IV ABU16_1072 PF00809 Pterin binding enzyme ABU16_1073 PF02152 Dihydroneopterin aldolase ABU16_1074 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) ABU16_1075 PF01381 Helix-turn-helix ABU16_1076 PF01207 Dihydrouridine synthase (Dus) ABU16_1077 PF00152 tRNA synthetases class II (D, K and N) ABU16_1077 PF01336 OB-fold nucleic acid binding domain ABU16_1078 PF17727 CtsR C-terminal dimerization domain ABU16_1078 PF05848 CtsR N-terminal HTH domain ABU16_1079 PF02151 UvrB/uvrC motif ABU16_1080 PF00217 ATP:guanido phosphotransferase, C-terminal catalytic domain ABU16_1081 PF00004 ATPase family associated with various cellular activities (AAA) ABU16_1081 PF07724 AAA domain (Cdc48 subfamily) ABU16_1081 PF17871 AAA lid domain ABU16_1081 PF10431 C-terminal, D2-small domain, of ClpB protein ABU16_1081 PF02861 Clp amino terminal domain, pathogenicity island component ABU16_1082 PF18073 Rubredoxin metal binding domain ABU16_1083 PF02457 DisA bacterial checkpoint controller nucleotide-binding ABU16_1083 PF10635 DisA bacterial checkpoint controller linker region ABU16_1085 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase ABU16_1086 PF02542 YgbB family ABU16_1087 PF00749 tRNA synthetases class I (E and Q), catalytic domain ABU16_1090 PF00132 Bacterial transferase hexapeptide (six repeats) ABU16_1090 PF06426 Serine acetyltransferase, N-terminal ABU16_1091 PF09190 DALR domain ABU16_1091 PF01406 tRNA synthetases class I (C) catalytic domain ABU16_1092 PF00636 Ribonuclease III domain ABU16_1093 PF08032 RNA 2'-O ribose methyltransferase substrate binding ABU16_1093 PF00588 SpoU rRNA Methylase family ABU16_1094 PF05991 YacP-like NYN domain ABU16_1095 PF08281 Sigma-70, region 4 ABU16_1095 PF04542 Sigma-70 region 2 ABU16_1096 PF00471 Ribosomal protein L33 ABU16_1097 PF00584 SecE/Sec61-gamma subunits of protein translocation complex ABU16_1098 PF00467 KOW motif ABU16_1098 PF02357 Transcription termination factor nusG ABU16_1099 PF03946 Ribosomal protein L11, N-terminal domain ABU16_1099 PF00298 Ribosomal protein L11, RNA binding domain ABU16_1100 PF00687 Ribosomal protein L1p/L10e family ABU16_1101 PF00466 Ribosomal protein L10 ABU16_1102 PF16320 Ribosomal protein L7/L12 dimerisation domain ABU16_1102 PF00542 Ribosomal protein L7/L12 C-terminal domain ABU16_1103 PF05175 Methyltransferase small domain ABU16_1104 PF10385 RNA polymerase beta subunit external 1 domain ABU16_1104 PF04565 RNA polymerase Rpb2, domain 3 ABU16_1104 PF00562 RNA polymerase Rpb2, domain 6 ABU16_1104 PF04563 RNA polymerase beta subunit ABU16_1104 PF04560 RNA polymerase Rpb2, domain 7 ABU16_1104 PF04561 RNA polymerase Rpb2, domain 2 ABU16_1105 PF05000 RNA polymerase Rpb1, domain 4 ABU16_1105 PF04983 RNA polymerase Rpb1, domain 3 ABU16_1105 PF00623 RNA polymerase Rpb1, domain 2 ABU16_1105 PF04997 RNA polymerase Rpb1, domain 1 ABU16_1105 PF04998 RNA polymerase Rpb1, domain 5 ABU16_1106 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family ABU16_1107 PF00164 Ribosomal protein S12/S23 ABU16_1108 PF00177 Ribosomal protein S7p/S5e ABU16_1109 PF03764 Elongation factor G, domain IV ABU16_1109 PF03144 Elongation factor Tu domain 2 ABU16_1109 PF00679 Elongation factor G C-terminus ABU16_1109 PF00009 Elongation factor Tu GTP binding domain ABU16_1109 PF14492 Elongation Factor G, domain II ABU16_1110 PF00009 Elongation factor Tu GTP binding domain ABU16_1110 PF03144 Elongation factor Tu domain 2 ABU16_1110 PF03143 Elongation factor Tu C-terminal domain ABU16_1111 PF12146 Serine aminopeptidase, S33 ABU16_1112 PF00338 Ribosomal protein S10p/S20e ABU16_1113 PF00297 Ribosomal protein L3 ABU16_1114 PF00573 Ribosomal protein L4/L1 family ABU16_1115 PF00276 Ribosomal protein L23 ABU16_1116 PF00181 Ribosomal Proteins L2, RNA binding domain ABU16_1116 PF03947 Ribosomal Proteins L2, C-terminal domain ABU16_1117 PF00237 Ribosomal protein L22p/L17e ABU16_1118 PF00189 Ribosomal protein S3, C-terminal domain ABU16_1118 PF07650 KH domain ABU16_1119 PF00252 Ribosomal protein L16p/L10e ABU16_1120 PF00831 Ribosomal L29 protein ABU16_1121 PF00366 Ribosomal protein S17 ABU16_1122 PF00467 KOW motif ABU16_1122 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 ABU16_1123 PF00281 Ribosomal protein L5 ABU16_1123 PF00673 ribosomal L5P family C-terminus ABU16_1124 PF00253 Ribosomal protein S14p/S29e ABU16_1125 PF00410 Ribosomal protein S8 ABU16_1126 PF00347 Ribosomal protein L6 ABU16_1127 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast ABU16_1128 PF03719 Ribosomal protein S5, C-terminal domain ABU16_1128 PF00333 Ribosomal protein S5, N-terminal domain ABU16_1129 PF00327 Ribosomal protein L30p/L7e ABU16_1130 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A ABU16_1131 PF00344 SecY translocase ABU16_1132 PF05191 Adenylate kinase, active site lid ABU16_1133 PF00557 Metallopeptidase family M24 ABU16_1135 PF00444 Ribosomal protein L36 ABU16_1136 PF00416 Ribosomal protein S13/S18 ABU16_1137 PF00411 Ribosomal protein S11 ABU16_1138 PF01000 RNA polymerase Rpb3/RpoA insert domain ABU16_1138 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain ABU16_1138 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain ABU16_1139 PF01196 Ribosomal protein L17 ABU16_1140 PF00005 ABC transporter ABU16_1141 PF00005 ABC transporter ABU16_1142 PF02361 Cobalt transport protein ABU16_1143 PF01416 tRNA pseudouridine synthase ABU16_1144 PF00572 Ribosomal protein L13 ABU16_1145 PF00380 Ribosomal protein S9/S16 ABU16_1146 PF08241 Methyltransferase domain ABU16_1147 PF10730 Protein of unknown function (DUF2521) ABU16_1148 PF01520 N-acetylmuramoyl-L-alanine amidase ABU16_1149 PF10609 NUBPL iron-transfer P-loop NTPase ABU16_1150 PF17898 Spore germination GerD central core domain ABU16_1151 PF14089 KinB-signalling pathway activation in sporulation ABU16_1152 PF01522 Polysaccharide deacetylase ABU16_1154 PF00916 Sulfate permease family ABU16_1154 PF01740 STAS domain ABU16_1155 PF01758 Sodium Bile acid symporter family ABU16_1156 PF00756 Putative esterase ABU16_1157 PF01032 FecCD transport family ABU16_1158 PF01032 FecCD transport family ABU16_1159 PF01497 Periplasmic binding protein ABU16_1160 PF01497 Periplasmic binding protein ABU16_1160 PF12833 Helix-turn-helix domain ABU16_1161 PF07075 Protein of unknown function (DUF1343) ABU16_1162 PF01915 Glycosyl hydrolase family 3 C-terminal domain ABU16_1162 PF00933 Glycosyl hydrolase family 3 N terminal domain ABU16_1163 PF00144 Beta-lactamase ABU16_1164 PF02378 Phosphotransferase system, EIIC ABU16_1164 PF00367 phosphotransferase system, EIIB ABU16_1165 PF01418 Helix-turn-helix domain, rpiR family ABU16_1165 PF01380 SIS domain ABU16_1166 PF01380 SIS domain ABU16_1168 PF04463 Protein of unknown function (DUF523) ABU16_1169 PF04542 Sigma-70 region 2 ABU16_1169 PF08281 Sigma-70, region 4 ABU16_1170 PF13490 Putative zinc-finger ABU16_1171 PF02457 DisA bacterial checkpoint controller nucleotide-binding ABU16_1172 PF07949 YbbR-like protein ABU16_1173 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain ABU16_1173 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III ABU16_1173 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I ABU16_1173 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II ABU16_1175 PF01380 SIS domain ABU16_1176 PF07934 8-oxoguanine DNA glycosylase, N-terminal domain ABU16_1176 PF00730 HhH-GPD superfamily base excision DNA repair protein ABU16_1177 PF12833 Helix-turn-helix domain ABU16_1177 PF02805 Metal binding domain of Ada ABU16_1178 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain ABU16_1178 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain ABU16_1179 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus ABU16_1179 PF00361 Proton-conducting membrane transporter ABU16_1180 PF10070 Uncharacterized protein conserved in bacteria (DUF2309) ABU16_1183 PF10057 Uncharacterized conserved protein (DUF2294) ABU16_1186 PF07690 Major Facilitator Superfamily ABU16_1188 PF13186 Iron-sulfur cluster-binding domain ABU16_1188 PF04055 Radical SAM superfamily ABU16_1189 PF02517 CPBP intramembrane metalloprotease ABU16_1190 PF00005 ABC transporter ABU16_1193 PF13905 Thioredoxin-like ABU16_1194 PF00561 alpha/beta hydrolase fold ABU16_1195 PF00072 Response regulator receiver domain ABU16_1195 PF00486 Transcriptional regulatory protein, C terminal ABU16_1196 PF00672 HAMP domain ABU16_1196 PF00512 His Kinase A (phospho-acceptor) domain ABU16_1198 PF00069 Protein kinase domain ABU16_1200 PF16226 Domain of unknown function (DUF4885) ABU16_1201 PF00324 Amino acid permease ABU16_1202 PF17334 Minor curli fiber component A ABU16_1203 PF17340 Family of unknown function (DUF5370) ABU16_1204 PF00905 Penicillin binding protein transpeptidase domain ABU16_1205 PF00067 Cytochrome P450 ABU16_1207 PF13520 Amino acid permease ABU16_1208 PF03009 Glycerophosphoryl diester phosphodiesterase family ABU16_1209 PF07690 Major Facilitator Superfamily ABU16_1210 PF10852 Protein of unknown function (DUF2651) ABU16_1211 PF00583 Acetyltransferase (GNAT) family ABU16_1211 PF01047 MarR family ABU16_1212 PF07690 Major Facilitator Superfamily ABU16_1216 PF08924 Domain of unknown function (DUF1906) ABU16_1216 PF01471 Putative peptidoglycan binding domain ABU16_1217 PF00892 EamA-like transporter family ABU16_1218 PF02311 AraC-like ligand binding domain ABU16_1218 PF12833 Helix-turn-helix domain ABU16_1219 PF02222 ATP-grasp domain ABU16_1220 PF00089 Trypsin ABU16_1221 PF10794 Protein of unknown function (DUF2606) ABU16_1222 PF12697 Alpha/beta hydrolase family ABU16_1223 PF01066 CDP-alcohol phosphatidyltransferase ABU16_1224 PF09335 SNARE associated Golgi protein ABU16_1225 PF02666 Phosphatidylserine decarboxylase ABU16_1227 PF05139 Erythromycin esterase ABU16_1228 PF12833 Helix-turn-helix domain ABU16_1230 PF00375 Sodium:dicarboxylate symporter family ABU16_1231 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 ABU16_1231 PF00367 phosphotransferase system, EIIB ABU16_1231 PF02378 Phosphotransferase system, EIIC ABU16_1232 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase ABU16_1234 PF07853 Protein of unknown function (DUF1648) ABU16_1235 PF01063 Amino-transferase class IV ABU16_1236 PF00324 Amino acid permease ABU16_1237 PF02574 Homocysteine S-methyltransferase ABU16_1239 PF01235 Sodium:alanine symporter family ABU16_1240 PF04960 Glutaminase ABU16_1241 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABU16_1242 PF08664 YcbB domain ABU16_1242 PF00072 Response regulator receiver domain ABU16_1243 PF00701 Dihydrodipicolinate synthetase family ABU16_1244 PF00171 Aldehyde dehydrogenase family ABU16_1245 PF07690 Major Facilitator Superfamily ABU16_1246 PF13378 Enolase C-terminal domain-like ABU16_1247 PF07729 FCD domain ABU16_1247 PF00392 Bacterial regulatory proteins, gntR family ABU16_1248 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus ABU16_1248 PF08666 SAF domain ABU16_1250 PF01636 Phosphotransferase enzyme family ABU16_1251 PF15777 Tryptophan RNA-binding attenuator protein inhibitory protein ABU16_1252 PF00892 EamA-like transporter family ABU16_1253 PF00072 Response regulator receiver domain ABU16_1253 PF00486 Transcriptional regulatory protein, C terminal ABU16_1254 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABU16_1254 PF00512 His Kinase A (phospho-acceptor) domain ABU16_1255 PF00005 ABC transporter ABU16_1257 PF10710 Protein of unknown function (DUF2512) ABU16_1259 PF07486 Cell Wall Hydrolase ABU16_1260 PF10138 vWA found in TerF C terminus ABU16_1262 PF09423 PhoD-like phosphatase ABU16_1262 PF16655 PhoD-like phosphatase, N-terminal domain ABU16_1263 PF02416 mttA/Hcf106 family ABU16_1264 PF00902 Sec-independent protein translocase protein (TatC) ABU16_1265 PF01470 Pyroglutamyl peptidase ABU16_1266 PF00266 Aminotransferase class-V ABU16_1267 PF07690 Major Facilitator Superfamily ABU16_1268 PF00440 Bacterial regulatory proteins, tetR family ABU16_1269 PF17763 Glutaminase/Asparaginase C-terminal domain ABU16_1269 PF00710 Asparaginase, N-terminal ABU16_1270 PF01674 Lipase (class 2) ABU16_1271 PF06271 RDD family ABU16_1272 PF02810 SEC-C motif ABU16_1272 PF05225 helix-turn-helix, Psq domain ABU16_1273 PF14501 GHKL domain ABU16_1274 PF04397 LytTr DNA-binding domain ABU16_1274 PF00072 Response regulator receiver domain ABU16_1275 PF00005 ABC transporter ABU16_1276 PF12679 ABC-2 family transporter protein ABU16_1277 PF00248 Aldo/keto reductase family ABU16_1278 PF17118 Domain of unknown function (DUF5105) ABU16_1278 PF11611 Domain of unknown function (DUF4352) ABU16_1279 PF16244 Domain of unknown function (DUF4901) ABU16_1280 PF16244 Domain of unknown function (DUF4901) ABU16_1281 PF13539 D-alanyl-D-alanine carboxypeptidase ABU16_1282 PF18801 response regulator aspartate phosphatase H, N terminal ABU16_1284 PF00128 Alpha amylase, catalytic domain ABU16_1285 PF01297 Zinc-uptake complex component A periplasmic ABU16_1286 PF00005 ABC transporter ABU16_1287 PF00950 ABC 3 transport family ABU16_1288 PF00296 Luciferase-like monooxygenase ABU16_1289 PF02342 TerD domain ABU16_1290 PF02342 TerD domain ABU16_1291 PF02342 TerD domain ABU16_1292 PF03741 Integral membrane protein TerC family ABU16_1293 PF14266 Putative component of 'biosynthetic module' ABU16_1294 PF05816 Toxic anion resistance protein (TelA) ABU16_1295 PF07690 Major Facilitator Superfamily ABU16_1296 PF07690 Major Facilitator Superfamily ABU16_1298 PF00005 ABC transporter ABU16_1298 PF00571 CBS domain ABU16_1299 PF00528 Binding-protein-dependent transport system inner membrane component ABU16_1300 PF04069 Substrate binding domain of ABC-type glycine betaine transport system ABU16_1301 PF07687 Peptidase dimerisation domain ABU16_1301 PF01546 Peptidase family M20/M25/M40 ABU16_1302 PF03606 C4-dicarboxylate anaerobic carrier ABU16_1304 PF00128 Alpha amylase, catalytic domain ABU16_1304 PF16738 Starch-binding module 26 ABU16_1306 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain ABU16_1306 PF00056 lactate/malate dehydrogenase, NAD binding domain ABU16_1307 PF02652 L-lactate permease ABU16_1308 PF07690 Major Facilitator Superfamily ABU16_1309 PF01047 MarR family ABU16_1310 PF01810 LysE type translocator ABU16_1311 PF08892 YqcI/YcgG family ABU16_1312 PF00324 Amino acid permease ABU16_1313 PF09347 Domain of unknown function (DUF1989) ABU16_1314 PF02540 NAD synthase ABU16_1316 PF01202 Shikimate kinase ABU16_1317 PF08241 Methyltransferase domain ABU16_1318 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABU16_1318 PF03466 LysR substrate binding domain ABU16_1319 PF05448 Acetyl xylan esterase (AXE1) ABU16_1320 PF10127 RNA repair pathway DNA polymerase beta family ABU16_1321 PF01619 Proline dehydrogenase ABU16_1322 PF00171 Aldehyde dehydrogenase family ABU16_1323 PF00474 Sodium:solute symporter family ABU16_1324 PF13556 PucR C-terminal helix-turn-helix domain ABU16_1324 PF17853 GGDEF-like domain ABU16_1325 PF09323 Domain of unknown function (DUF1980) ABU16_1326 PF03773 Predicted permease ABU16_1327 PF00561 alpha/beta hydrolase fold ABU16_1328 PF07992 Pyridine nucleotide-disulphide oxidoreductase ABU16_1329 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases ABU16_1330 PF00355 Rieske [2Fe-2S] domain ABU16_1331 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain ABU16_1331 PF01077 Nitrite and sulphite reductase 4Fe-4S domain ABU16_1331 PF04324 BFD-like [2Fe-2S] binding domain ABU16_1331 PF18267 Rubredoxin NAD+ reductase C-terminal domain ABU16_1331 PF07992 Pyridine nucleotide-disulphide oxidoreductase ABU16_1332 PF01568 Molydopterin dinucleotide binding domain ABU16_1332 PF04879 Molybdopterin oxidoreductase Fe4S4 domain ABU16_1332 PF00384 Molybdopterin oxidoreductase ABU16_1333 PF04324 BFD-like [2Fe-2S] binding domain ABU16_1333 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain ABU16_1333 PF18267 Rubredoxin NAD+ reductase C-terminal domain ABU16_1333 PF07992 Pyridine nucleotide-disulphide oxidoreductase ABU16_1334 PF07690 Major Facilitator Superfamily ABU16_1335 PF02649 Type I GTP cyclohydrolase folE2 ABU16_1336 PF03734 L,D-transpeptidase catalytic domain ABU16_1338 PF07683 Cobalamin synthesis protein cobW C-terminal domain ABU16_1338 PF02492 CobW/HypB/UreG, nucleotide-binding domain ABU16_1339 PF00528 Binding-protein-dependent transport system inner membrane component ABU16_1340 PF00497 Bacterial extracellular solute-binding proteins, family 3 ABU16_1341 PF06271 RDD family ABU16_1342 PF10925 Protein of unknown function (DUF2680) ABU16_1343 PF00232 Glycosyl hydrolase family 1 ABU16_1344 PF11033 Competence protein J (ComJ) ABU16_1345 PF14040 Deoxyribonuclease NucA/NucB ABU16_1346 PF00672 HAMP domain ABU16_1346 PF17202 Single cache domain 3 ABU16_1346 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ABU16_1347 PF01380 SIS domain ABU16_1348 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family ABU16_1349 PF01638 HxlR-like helix-turn-helix ABU16_1352 PF00668 Condensation domain ABU16_1352 PF13193 AMP-binding enzyme C-terminal domain ABU16_1352 PF00550 Phosphopantetheine attachment site ABU16_1352 PF00501 AMP-binding enzyme ABU16_1353 PF00501 AMP-binding enzyme ABU16_1353 PF13193 AMP-binding enzyme C-terminal domain ABU16_1353 PF00550 Phosphopantetheine attachment site ABU16_1353 PF00668 Condensation domain ABU16_1354 PF00501 AMP-binding enzyme ABU16_1354 PF13193 AMP-binding enzyme C-terminal domain ABU16_1354 PF00668 Condensation domain ABU16_1354 PF00550 Phosphopantetheine attachment site ABU16_1354 PF00975 Thioesterase domain ABU16_1355 PF00975 Thioesterase domain ABU16_1356 PF07690 Major Facilitator Superfamily ABU16_1357 PF14317 YcxB-like protein ABU16_1358 PF00892 EamA-like transporter family ABU16_1359 PF00392 Bacterial regulatory proteins, gntR family ABU16_1359 PF00155 Aminotransferase class I and II ABU16_1360 PF01648 4'-phosphopantetheinyl transferase superfamily ABU16_1362 PF00005 ABC transporter ABU16_1363 PF00528 Binding-protein-dependent transport system inner membrane component ABU16_1364 PF00497 Bacterial extracellular solute-binding proteins, family 3 ABU16_1365 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABU16_1365 PF03466 LysR substrate binding domain ABU16_1366 PF02441 Flavoprotein ABU16_1367 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase ABU16_1370 PF00561 alpha/beta hydrolase fold ABU16_1371 PF00854 POT family ABU16_1372 PF12708 Pectate lyase superfamily protein ABU16_1372 PF13229 Right handed beta helix region ABU16_1374 PF03323 Bacillus/Clostridium GerA spore germination protein ABU16_1375 PF05504 Spore germination B3/ GerAC like, C-terminal ABU16_1376 PF03845 Spore germination protein ABU16_1377 PF00005 ABC transporter ABU16_1378 PF12704 MacB-like periplasmic core domain ABU16_1378 PF02687 FtsX-like permease family ABU16_1379 PF00072 Response regulator receiver domain ABU16_1379 PF00486 Transcriptional regulatory protein, C terminal ABU16_1380 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABU16_1380 PF00512 His Kinase A (phospho-acceptor) domain ABU16_1380 PF00672 HAMP domain ABU16_1381 PF18801 response regulator aspartate phosphatase H, N terminal ABU16_1382 PF11131 Rap-phr extracellular signalling ABU16_1383 PF09680 Family of unknown function ABU16_1384 PF09680 Family of unknown function ABU16_1385 PF13840 ACT domain ABU16_1385 PF00696 Amino acid kinase family ABU16_1386 PF01032 FecCD transport family ABU16_1387 PF01032 FecCD transport family ABU16_1388 PF00005 ABC transporter ABU16_1389 PF01497 Periplasmic binding protein ABU16_1390 PF07690 Major Facilitator Superfamily ABU16_1391 PF00440 Bacterial regulatory proteins, tetR family ABU16_1392 PF00881 Nitroreductase family ABU16_1393 PF03992 Antibiotic biosynthesis monooxygenase ABU16_1394 PF01022 Bacterial regulatory protein, arsR family ABU16_1395 PF00155 Aminotransferase class I and II ABU16_1395 PF00392 Bacterial regulatory proteins, gntR family ABU16_1396 PF00202 Aminotransferase class-III ABU16_1397 PF00171 Aldehyde dehydrogenase family ABU16_1398 PF06800 Sugar transport protein ABU16_1400 PF07987 Domain of unkown function (DUF1775) ABU16_1401 PF04234 CopC domain ABU16_1401 PF05425 Copper resistance protein D ABU16_1401 PF13115 YtkA-like ABU16_1402 PF05573 NosL ABU16_1402 PF08220 DeoR-like helix-turn-helix domain ABU16_1404 PF02378 Phosphotransferase system, EIIC ABU16_1404 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit ABU16_1405 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 ABU16_1406 PF08125 Mannitol dehydrogenase C-terminal domain ABU16_1406 PF01232 Mannitol dehydrogenase Rossmann domain ABU16_1407 PF00180 Isocitrate/isopropylmalate dehydrogenase ABU16_1408 PF10502 Signal peptidase, peptidase S26 ABU16_1409 PF01738 Dienelactone hydrolase family ABU16_1410 PF07977 FabA-like domain ABU16_1413 PF03746 LamB/YcsF family ABU16_1414 PF01566 Natural resistance-associated macrophage protein ABU16_1415 PF07286 Protein of unknown function (DUF1445) ABU16_1416 PF02682 Carboxyltransferase domain, subdomain C and D ABU16_1417 PF02626 Carboxyltransferase domain, subdomain A and B ABU16_1418 PF01614 Bacterial transcriptional regulator ABU16_1418 PF09339 IclR helix-turn-helix domain ABU16_1419 PF13472 GDSL-like Lipase/Acylhydrolase family ABU16_1420 PF13129 Protein of unknown function (DUF3953) ABU16_1421 PF03992 Antibiotic biosynthesis monooxygenase ABU16_1423 PF05223 NTF2-like N-terminal transpeptidase domain ABU16_1423 PF03717 Penicillin-binding Protein dimerisation domain ABU16_1423 PF00905 Penicillin binding protein transpeptidase domain ABU16_1424 PF00248 Aldo/keto reductase family ABU16_1425 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 ABU16_1425 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit ABU16_1425 PF05043 Mga helix-turn-helix domain ABU16_1425 PF00874 PRD domain ABU16_1425 PF08279 HTH domain ABU16_1427 PF13193 AMP-binding enzyme C-terminal domain ABU16_1427 PF00501 AMP-binding enzyme ABU16_1428 PF13649 Methyltransferase domain ABU16_1431 PF13302 Acetyltransferase (GNAT) domain ABU16_1432 PF16242 Pyridoxamine 5'-phosphate oxidase like ABU16_1433 PF10997 Alternate to MurJ ABU16_1434 PF12823 Domain of unknown function (DUF3817) ABU16_1435 PF01037 Lrp/AsnC ligand binding domain ABU16_1436 PF01131 DNA topoisomerase ABU16_1436 PF01751 Toprim domain ABU16_1438 PF00990 Diguanylate cyclase, GGDEF domain ABU16_1439 PF10096 Uncharacterized protein conserved in bacteria (DUF2334) ABU16_1441 PF03170 Bacterial cellulose synthase subunit ABU16_1442 PF13520 Amino acid permease ABU16_1443 PF00293 NUDIX domain ABU16_1444 PF00205 Thiamine pyrophosphate enzyme, central domain ABU16_1444 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain ABU16_1444 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain ABU16_1446 PF01566 Natural resistance-associated macrophage protein ABU16_1447 PF04226 Transglycosylase associated protein ABU16_1449 PF09954 Uncharacterized protein conserved in bacteria (DUF2188) ABU16_1450 PF12787 EcsC protein family ABU16_1451 PF10685 Stress-induced bacterial acidophilic repeat motif ABU16_1451 PF00477 Small hydrophilic plant seed protein ABU16_1452 PF07883 Cupin domain ABU16_1453 PF16291 Domain of unknown function (DUF4937 ABU16_1454 PF05067 Manganese containing catalase ABU16_1455 PF03480 Bacterial extracellular solute-binding protein, family 7 ABU16_1456 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABU16_1456 PF17203 Single cache domain 3 ABU16_1456 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain ABU16_1457 PF08279 HTH domain ABU16_1457 PF00072 Response regulator receiver domain ABU16_1458 PF00375 Sodium:dicarboxylate symporter family ABU16_1459 PF01594 AI-2E family transporter ABU16_1461 PF00005 ABC transporter ABU16_1464 PF08028 Acyl-CoA dehydrogenase, C-terminal domain ABU16_1464 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ABU16_1464 PF02770 Acyl-CoA dehydrogenase, middle domain ABU16_1465 PF13040 Fur-regulated basic protein B ABU16_1467 PF16916 Dimerisation domain of Zinc Transporter ABU16_1467 PF01545 Cation efflux family ABU16_1468 PF00085 Thioredoxin ABU16_1469 PF07478 D-ala D-ala ligase C-terminus ABU16_1469 PF01820 D-ala D-ala ligase N-terminus ABU16_1470 PF01225 Mur ligase family, catalytic domain ABU16_1470 PF02875 Mur ligase family, glutamate ligase domain ABU16_1470 PF08245 Mur ligase middle domain ABU16_1471 PF00270 DEAD/DEAH box helicase ABU16_1471 PF00271 Helicase conserved C-terminal domain ABU16_1472 PF03703 Bacterial PH domain ABU16_1473 PF03703 Bacterial PH domain ABU16_1474 PF01694 Rhomboid family ABU16_1475 PF01648 4'-phosphopantetheinyl transferase superfamily ABU16_1477 PF01168 Alanine racemase, N-terminal domain ABU16_1477 PF00842 Alanine racemase, C-terminal domain ABU16_1478 PF01402 Ribbon-helix-helix protein, copG family ABU16_1479 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system ABU16_1480 PF08678 Rsbr N terminal ABU16_1480 PF01740 STAS domain ABU16_1481 PF01740 STAS domain ABU16_1482 PF13581 Histidine kinase-like ATPase domain ABU16_1483 PF08673 Phosphoserine phosphatase RsbU, N-terminal domain ABU16_1483 PF07228 Stage II sporulation protein E (SpoIIE) ABU16_1484 PF01740 STAS domain ABU16_1485 PF13581 Histidine kinase-like ATPase domain ABU16_1486 PF04545 Sigma-70, region 4 ABU16_1486 PF04539 Sigma-70 region 3 ABU16_1486 PF04542 Sigma-70 region 2 ABU16_1487 PF07228 Stage II sporulation protein E (SpoIIE) ABU16_1491 PF01878 EVE domain ABU16_1492 PF01047 MarR family ABU16_1493 PF00575 S1 RNA binding domain ABU16_1493 PF17674 HHH domain ABU16_1493 PF16921 Tex protein YqgF-like domain ABU16_1493 PF09371 Tex-like protein N-terminal domain ABU16_1495 PF10263 SprT-like family ABU16_1495 PF17283 SprT-like zinc ribbon domain ABU16_1496 PF00296 Luciferase-like monooxygenase ABU16_1497 PF01037 Lrp/AsnC ligand binding domain ABU16_1498 PF01037 Lrp/AsnC ligand binding domain ABU16_1499 PF00857 Isochorismatase family ABU16_1500 PF12706 Beta-lactamase superfamily domain ABU16_1501 PF00083 Sugar (and other) transporter ABU16_1501 PF07690 Major Facilitator Superfamily ABU16_1505 PF01965 DJ-1/PfpI family ABU16_1506 PF00313 'Cold-shock' DNA-binding domain ABU16_1507 PF02559 CarD-like/TRCF domain ABU16_1509 PF00892 EamA-like transporter family ABU16_1510 PF02311 AraC-like ligand binding domain ABU16_1510 PF12833 Helix-turn-helix domain ABU16_1511 PF00892 EamA-like transporter family ABU16_1512 PF06445 GyrI-like small molecule binding domain ABU16_1512 PF12833 Helix-turn-helix domain ABU16_1513 PF00392 Bacterial regulatory proteins, gntR family ABU16_1513 PF00155 Aminotransferase class I and II ABU16_1514 PF07690 Major Facilitator Superfamily ABU16_1516 PF08818 Domain of unknown function (DU1801) ABU16_1519 PF00892 EamA-like transporter family ABU16_1520 PF00392 Bacterial regulatory proteins, gntR family ABU16_1520 PF00155 Aminotransferase class I and II ABU16_1521 PF01575 MaoC like domain ABU16_1522 PF06821 Serine hydrolase ABU16_1523 PF01638 HxlR-like helix-turn-helix ABU16_1524 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 ABU16_1524 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) ABU16_1525 PF01638 HxlR-like helix-turn-helix ABU16_1526 PF02525 Flavodoxin-like fold ABU16_1527 PF07690 Major Facilitator Superfamily ABU16_1528 PF00440 Bacterial regulatory proteins, tetR family ABU16_1528 PF16859 Tetracyclin repressor-like, C-terminal domain ABU16_1530 PF01022 Bacterial regulatory protein, arsR family ABU16_1531 PF02040 Arsenical pump membrane protein ABU16_1532 PF01451 Low molecular weight phosphotyrosine protein phosphatase ABU16_1533 PF12746 GNAT acetyltransferase ABU16_1534 PF00892 EamA-like transporter family ABU16_1535 PF00392 Bacterial regulatory proteins, gntR family ABU16_1535 PF00155 Aminotransferase class I and II ABU16_1536 PF01613 Flavin reductase like domain ABU16_1538 PF02627 Carboxymuconolactone decarboxylase family ABU16_1540 PF07730 Histidine kinase ABU16_1540 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABU16_1541 PF00196 Bacterial regulatory proteins, luxR family ABU16_1541 PF00072 Response regulator receiver domain ABU16_1542 PF03176 MMPL family ABU16_1544 PF12697 Alpha/beta hydrolase family ABU16_1545 PF04474 Protein of unknown function (DUF554) ABU16_1546 PF06445 GyrI-like small molecule binding domain ABU16_1546 PF13411 MerR HTH family regulatory protein ABU16_1547 PF01545 Cation efflux family ABU16_1547 PF16916 Dimerisation domain of Zinc Transporter ABU16_1548 PF00881 Nitroreductase family ABU16_1549 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily ABU16_1550 PF07681 DoxX ABU16_1551 PF00085 Thioredoxin ABU16_1554 PF10676 Spore germination protein gerPA/gerPF ABU16_1557 PF10676 Spore germination protein gerPA/gerPF ABU16_1558 PF04239 Protein of unknown function (DUF421) ABU16_1559 PF04239 Protein of unknown function (DUF421) ABU16_1560 PF00011 Hsp20/alpha crystallin family ABU16_1561 PF10676 Spore germination protein gerPA/gerPF ABU16_1563 PF00440 Bacterial regulatory proteins, tetR family ABU16_1564 PF13564 DoxX-like family ABU16_1565 PF00583 Acetyltransferase (GNAT) family ABU16_1567 PF00324 Amino acid permease ABU16_1569 PF05163 DinB family ABU16_1570 PF01047 MarR family ABU16_1571 PF03176 MMPL family ABU16_1572 PF00881 Nitroreductase family ABU16_1573 PF01047 MarR family ABU16_1574 PF07690 Major Facilitator Superfamily ABU16_1575 PF01925 Sulfite exporter TauE/SafE ABU16_1576 PF07729 FCD domain ABU16_1576 PF00392 Bacterial regulatory proteins, gntR family ABU16_1577 PF01476 LysM domain ABU16_1577 PF00704 Glycosyl hydrolases family 18 ABU16_1578 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase ABU16_1579 PF11611 Domain of unknown function (DUF4352) ABU16_1579 PF08139 Prokaryotic membrane lipoprotein lipid attachment site ABU16_1580 PF00245 Alkaline phosphatase ABU16_1581 PF08818 Domain of unknown function (DU1801) ABU16_1582 PF16302 Domain of unknown function (DUF4944) ABU16_1583 PF00583 Acetyltransferase (GNAT) family ABU16_1584 PF01966 HD domain ABU16_1586 PF07563 Protein of unknown function (DUF1541) ABU16_1587 PF07690 Major Facilitator Superfamily ABU16_1588 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit ABU16_1589 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit ABU16_1590 PF02378 Phosphotransferase system, EIIC ABU16_1591 PF00232 Glycosyl hydrolase family 1 ABU16_1592 PF07702 UTRA domain ABU16_1592 PF00392 Bacterial regulatory proteins, gntR family ABU16_1593 PF00480 ROK family ABU16_1594 PF01238 Phosphomannose isomerase type I ABU16_1595 PF02156 Glycosyl hydrolase family 26 ABU16_1597 PF02769 AIR synthase related protein, C-terminal domain ABU16_1597 PF00586 AIR synthase related protein, N-terminal domain ABU16_1598 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE ABU16_1599 PF00814 Glycoprotease family ABU16_1600 PF00583 Acetyltransferase (GNAT) family ABU16_1601 PF00814 Glycoprotease family ABU16_1602 PF16326 ABC transporter C-terminal domain ABU16_1602 PF00005 ABC transporter ABU16_1602 PF12848 ABC transporter ABU16_1603 PF01967 MoaC family ABU16_1604 PF02629 CoA binding domain ABU16_1604 PF06971 Putative DNA-binding protein N-terminus ABU16_1605 PF02416 mttA/Hcf106 family ABU16_1606 PF00902 Sec-independent protein translocase protein (TatC) ABU16_1607 PF14146 Domain of unknown function (DUF4305) ABU16_1608 PF02517 CPBP intramembrane metalloprotease ABU16_1609 PF00166 Chaperonin 10 Kd subunit ABU16_1610 PF00118 TCP-1/cpn60 chaperonin family ABU16_1613 PF00145 C-5 cytosine-specific DNA methylase ABU16_1614 PF00145 C-5 cytosine-specific DNA methylase ABU16_1617 PF07728 AAA domain (dynein-related subfamily) ABU16_1618 PF09563 LlaJI restriction endonuclease ABU16_1622 PF13176 Tetratricopeptide repeat ABU16_1622 PF00931 NB-ARC domain ABU16_1623 PF00107 Zinc-binding dehydrogenase ABU16_1623 PF08240 Alcohol dehydrogenase GroES-like domain ABU16_1625 PF00294 pfkB family carbohydrate kinase ABU16_1626 PF04012 PspA/IM30 family ABU16_1627 PF08271 TFIIB zinc-binding ABU16_1628 PF04536 TPM domain ABU16_1629 PF13421 SPFH domain-Band 7 family ABU16_1630 PF07885 Ion channel ABU16_1632 PF00083 Sugar (and other) transporter ABU16_1633 PF00107 Zinc-binding dehydrogenase ABU16_1633 PF08240 Alcohol dehydrogenase GroES-like domain ABU16_1634 PF03330 Lytic transglycolase ABU16_1635 PF07676 WD40-like Beta Propeller Repeat ABU16_1637 PF14169 Cold-inducible protein YdjO ABU16_1638 PF12697 Alpha/beta hydrolase family ABU16_1639 PF13170 Protein of unknown function (DUF4003) ABU16_1640 PF00394 Multicopper oxidase ABU16_1640 PF07731 Multicopper oxidase ABU16_1640 PF07732 Multicopper oxidase ABU16_1641 PF00324 Amino acid permease ABU16_1642 PF01545 Cation efflux family ABU16_1642 PF16916 Dimerisation domain of Zinc Transporter ABU16_1643 PF07726 ATPase family associated with various cellular activities (AAA) ABU16_1643 PF17863 AAA lid domain ABU16_1644 PF01882 Protein of unknown function DUF58 ABU16_1645 PF13559 Domain of unknown function (DUF4129) ABU16_1645 PF11992 Domain of unknown function (DUF3488) ABU16_1645 PF01841 Transglutaminase-like superfamily ABU16_1647 PF00117 Glutamine amidotransferase class-I ABU16_1647 PF02540 NAD synthase ABU16_1647 PF00958 GMP synthase C terminal domain ABU16_1648 PF00860 Permease family ABU16_1650 PF13076 Fur-regulated basic protein A ABU16_1651 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) ABU16_1652 PF14044 NETI protein ABU16_1653 PF00731 AIR carboxylase ABU16_1654 PF02222 ATP-grasp domain ABU16_1654 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain ABU16_1655 PF00206 Lyase ABU16_1655 PF10397 Adenylosuccinate lyase C-terminus ABU16_1656 PF01259 SAICAR synthetase ABU16_1657 PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase ABU16_1659 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain ABU16_1659 PF00586 AIR synthase related protein, N-terminal domain ABU16_1659 PF02769 AIR synthase related protein, C-terminal domain ABU16_1660 PF00156 Phosphoribosyl transferase domain ABU16_1661 PF02769 AIR synthase related protein, C-terminal domain ABU16_1661 PF00586 AIR synthase related protein, N-terminal domain ABU16_1662 PF00551 Formyl transferase ABU16_1663 PF01808 AICARFT/IMPCHase bienzyme ABU16_1663 PF02142 MGS-like domain ABU16_1664 PF02844 Phosphoribosylglycinamide synthetase, N domain ABU16_1664 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain ABU16_1664 PF02843 Phosphoribosylglycinamide synthetase, C domain ABU16_1665 PF01037 Lrp/AsnC ligand binding domain ABU16_1666 PF13520 Amino acid permease ABU16_1667 PF11127 Protein of unknown function (DUF2892) ABU16_1668 PF01979 Amidohydrolase family ABU16_1668 PF13382 Adenine deaminase C-terminal domain ABU16_1669 PF17479 Protein of unknown function (DUF3048) C-terminal domain ABU16_1669 PF11258 Protein of unknown function (DUF3048) N-terminal domain ABU16_1670 PF01371 Trp repressor protein ABU16_1671 PF01645 Conserved region in glutamate synthase ABU16_1673 PF01884 PcrB family ABU16_1674 PF00580 UvrD/REP helicase N-terminal domain ABU16_1674 PF13361 UvrD-like helicase C-terminal domain ABU16_1675 PF12826 Helix-hairpin-helix motif ABU16_1675 PF00533 BRCA1 C Terminus (BRCT) domain ABU16_1675 PF01653 NAD-dependent DNA ligase adenylation domain ABU16_1675 PF03120 NAD-dependent DNA ligase OB-fold domain ABU16_1675 PF03119 NAD-dependent DNA ligase C4 zinc finger domain ABU16_1676 PF07537 CamS sex pheromone cAM373 precursor ABU16_1677 PF01636 Phosphotransferase enzyme family ABU16_1678 PF02308 MgtC family ABU16_1679 PF00474 Sodium:solute symporter family ABU16_1680 PF02686 Glu-tRNAGln amidotransferase C subunit ABU16_1681 PF01425 Amidase ABU16_1682 PF02637 GatB domain ABU16_1682 PF02934 GatB/GatE catalytic domain ABU16_1683 PF00440 Bacterial regulatory proteins, tetR family ABU16_1684 PF00873 AcrB/AcrD/AcrF family ABU16_1685 PF00781 Diacylglycerol kinase catalytic domain ABU16_1686 PF05958 tRNA (Uracil-5-)-methyltransferase ABU16_1686 PF01938 TRAM domain ABU16_1687 PF07508 Recombinase ABU16_1687 PF13408 Recombinase zinc beta ribbon domain ABU16_1688 PF00239 Resolvase, N terminal domain ABU16_1688 PF18010 Cry35Ab1 HTH C-terminal domain ABU16_1691 PF10544 T5orf172 domain ABU16_1694 PF04634 Protein of unknown function, DUF600 ABU16_1695 PF04740 LXG domain of WXG superfamily ABU16_1699 PF18801 response regulator aspartate phosphatase H, N terminal ABU16_1699 PF13176 Tetratricopeptide repeat ABU16_1701 PF01709 Transcriptional regulator ABU16_1703 PF00440 Bacterial regulatory proteins, tetR family ABU16_1704 PF12680 SnoaL-like domain ABU16_1705 PF01370 NAD dependent epimerase/dehydratase family ABU16_1706 PF11007 Spore coat associated protein JA (CotJA) ABU16_1707 PF12652 CotJB protein ABU16_1708 PF05067 Manganese containing catalase ABU16_1709 PF00583 Acetyltransferase (GNAT) family ABU16_1710 PF14150 YesK-like protein ABU16_1711 PF14150 YesK-like protein ABU16_1713 PF04854 Protein of unknown function, DUF624 ABU16_1714 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABU16_1714 PF06580 Histidine kinase ABU16_1714 PF00672 HAMP domain ABU16_1714 PF02743 Cache domain ABU16_1715 PF12833 Helix-turn-helix domain ABU16_1715 PF00072 Response regulator receiver domain ABU16_1716 PF13416 Bacterial extracellular solute-binding protein ABU16_1717 PF00528 Binding-protein-dependent transport system inner membrane component ABU16_1718 PF00528 Binding-protein-dependent transport system inner membrane component ABU16_1719 PF07470 Glycosyl Hydrolase Family 88 ABU16_1720 PF18370 Rhamnogalacturonan I lyases beta-sheet domain ABU16_1720 PF01839 FG-GAP repeat ABU16_1721 PF01494 FAD binding domain ABU16_1722 PF13039 Protein of unknown function (DUF3900) ABU16_1722 PF13037 Domain of unknown function (DUF3898) ABU16_1723 PF00067 Cytochrome P450 ABU16_1723 PF00175 Oxidoreductase NAD-binding domain ABU16_1723 PF00667 FAD binding domain ABU16_1723 PF00258 Flavodoxin ABU16_1725 PF00884 Sulfatase ABU16_1727 PF00483 Nucleotidyl transferase ABU16_1728 PF16363 GDP-mannose 4,6 dehydratase ABU16_1729 PF03407 Nucleotide-diphospho-sugar transferase ABU16_1730 PF00535 Glycosyl transferase family 2 ABU16_1731 PF03407 Nucleotide-diphospho-sugar transferase ABU16_1732 PF07690 Major Facilitator Superfamily ABU16_1733 PF07690 Major Facilitator Superfamily ABU16_1734 PF13419 Haloacid dehalogenase-like hydrolase ABU16_1735 PF13520 Amino acid permease ABU16_1736 PF00171 Aldehyde dehydrogenase family ABU16_1737 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ABU16_1738 PF12848 ABC transporter ABU16_1738 PF16326 ABC transporter C-terminal domain ABU16_1738 PF00005 ABC transporter ABU16_1739 PF10787 Uncharacterised protein from bacillus cereus group ABU16_1740 PF13411 MerR HTH family regulatory protein ABU16_1741 PF07690 Major Facilitator Superfamily ABU16_1744 PF00005 ABC transporter ABU16_1744 PF12848 ABC transporter ABU16_1745 PF00270 DEAD/DEAH box helicase ABU16_1745 PF00271 Helicase conserved C-terminal domain ABU16_1746 PF00583 Acetyltransferase (GNAT) family ABU16_1747 PF16884 N-terminal domain of oxidoreductase ABU16_1747 PF00107 Zinc-binding dehydrogenase ABU16_1749 PF07690 Major Facilitator Superfamily ABU16_1750 PF03781 Sulfatase-modifying factor enzyme 1 ABU16_1752 PF00005 ABC transporter ABU16_1753 PF01032 FecCD transport family ABU16_1754 PF01032 FecCD transport family ABU16_1755 PF01497 Periplasmic binding protein ABU16_1756 PF11486 Protein of unknown function (DUF3212) ABU16_1757 PF11181 Heat induced stress protein YflT ABU16_1758 PF00544 Pectate lyase ABU16_1759 PF00939 Sodium:sulfate symporter transmembrane region ABU16_1760 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABU16_1760 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain ABU16_1761 PF12431 Transcriptional regulator ABU16_1761 PF08279 HTH domain ABU16_1761 PF00072 Response regulator receiver domain ABU16_1762 PF03401 Tripartite tricarboxylate transporter family receptor ABU16_1764 PF03600 Citrate transporter ABU16_1765 PF00753 Metallo-beta-lactamase superfamily ABU16_1766 PF02898 Nitric oxide synthase, oxygenase domain ABU16_1767 PF00708 Acylphosphatase ABU16_1768 PF03473 MOSC domain ABU16_1768 PF03475 3-alpha domain ABU16_1769 PF11121 Protein of unknown function (DUF2639) ABU16_1771 PF11588 Protein of unknown function (DUF3243) ABU16_1772 PF00557 Metallopeptidase family M24 ABU16_1773 PF02378 Phosphotransferase system, EIIC ABU16_1773 PF00367 phosphotransferase system, EIIB ABU16_1774 PF00884 Sulfatase ABU16_1775 PF09350 Domain of unknown function (DUF1992) ABU16_1776 PF01235 Sodium:alanine symporter family ABU16_1777 PF03845 Spore germination protein ABU16_1779 PF05504 Spore germination B3/ GerAC like, C-terminal ABU16_1780 PF03323 Bacillus/Clostridium GerA spore germination protein ABU16_1781 PF00367 phosphotransferase system, EIIB ABU16_1781 PF02378 Phosphotransferase system, EIIC ABU16_1782 PF00128 Alpha amylase, catalytic domain ABU16_1782 PF16657 Maltogenic Amylase, C-terminal domain ABU16_1783 PF07702 UTRA domain ABU16_1783 PF00392 Bacterial regulatory proteins, gntR family ABU16_1784 PF00881 Nitroreductase family ABU16_1785 PF02872 5'-nucleotidase, C-terminal domain ABU16_1785 PF00149 Calcineurin-like phosphoesterase ABU16_1786 PF01965 DJ-1/PfpI family ABU16_1787 PF07690 Major Facilitator Superfamily ABU16_1788 PF06569 Protein of unknown function (DUF1128) ABU16_1790 PF01451 Low molecular weight phosphotyrosine protein phosphatase ABU16_1792 PF03631 Virulence factor BrkB ABU16_1793 PF07690 Major Facilitator Superfamily ABU16_1795 PF01699 Sodium/calcium exchanger protein ABU16_1796 PF14167 YfkD-like protein ABU16_1797 PF00924 Mechanosensitive ion channel ABU16_1798 PF08756 YfkB-like domain ABU16_1798 PF04055 Radical SAM superfamily ABU16_1800 PF01522 Polysaccharide deacetylase ABU16_1801 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase ABU16_1801 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase ABU16_1802 PF01544 CorA-like Mg2+ transporter protein ABU16_1803 PF00730 HhH-GPD superfamily base excision DNA repair protein ABU16_1804 PF01938 TRAM domain ABU16_1804 PF05958 tRNA (Uracil-5-)-methyltransferase ABU16_1805 PF01207 Dihydrouridine synthase (Dus) ABU16_1808 PF00676 Dehydrogenase E1 component ABU16_1809 PF02779 Transketolase, pyrimidine binding domain ABU16_1809 PF02780 Transketolase, C-terminal domain ABU16_1810 PF00364 Biotin-requiring enzyme ABU16_1810 PF02817 e3 binding domain ABU16_1810 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) ABU16_1811 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain ABU16_1811 PF07992 Pyridine nucleotide-disulphide oxidoreductase ABU16_1812 PF02954 Bacterial regulatory protein, Fis family ABU16_1812 PF01590 GAF domain ABU16_1812 PF00158 Sigma-54 interaction domain ABU16_1813 PF08141 Small acid-soluble spore protein H family ABU16_1814 PF02694 Uncharacterised BCR, YnfA/UPF0060 family ABU16_1815 PF17353 Family of unknown function (DUF5381) ABU16_1816 PF17353 Family of unknown function (DUF5381) ABU16_1819 PF06013 Proteins of 100 residues with WXG ABU16_1820 PF11975 Family 4 glycosyl hydrolase C-terminal domain ABU16_1820 PF02056 Family 4 glycosyl hydrolase ABU16_1821 PF01418 Helix-turn-helix domain, rpiR family ABU16_1821 PF01380 SIS domain ABU16_1822 PF02378 Phosphotransferase system, EIIC ABU16_1822 PF00367 phosphotransferase system, EIIB ABU16_1823 PF00005 ABC transporter ABU16_1823 PF00664 ABC transporter transmembrane region ABU16_1824 PF00005 ABC transporter ABU16_1824 PF00664 ABC transporter transmembrane region ABU16_1825 PF07681 DoxX ABU16_1826 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily ABU16_1827 PF02311 AraC-like ligand binding domain ABU16_1827 PF12833 Helix-turn-helix domain ABU16_1828 PF00083 Sugar (and other) transporter ABU16_1829 PF01261 Xylose isomerase-like TIM barrel ABU16_1830 PF02894 Oxidoreductase family, C-terminal alpha/beta domain ABU16_1830 PF01408 Oxidoreductase family, NAD-binding Rossmann fold ABU16_1832 PF07730 Histidine kinase ABU16_1833 PF00196 Bacterial regulatory proteins, luxR family ABU16_1833 PF00072 Response regulator receiver domain ABU16_1835 PF00005 ABC transporter ABU16_1838 PF03551 Transcriptional regulator PadR-like family ABU16_1838 PF10400 Virulence activator alpha C-term ABU16_1839 PF01674 Lipase (class 2) ABU16_1840 PF01757 Acyltransferase family ABU16_1841 PF17922 Tetracyclin repressor-like, C-terminal domain ABU16_1841 PF00440 Bacterial regulatory proteins, tetR family ABU16_1842 PF07690 Major Facilitator Superfamily ABU16_1843 PF12867 DinB superfamily ABU16_1844 PF07690 Major Facilitator Superfamily ABU16_1845 PF01047 MarR family ABU16_1846 PF09924 Uncharacterised conserved protein (DUF2156) ABU16_1846 PF03706 Lysylphosphatidylglycerol synthase TM region ABU16_1847 PF01497 Periplasmic binding protein ABU16_1848 PF01032 FecCD transport family ABU16_1849 PF01032 FecCD transport family ABU16_1850 PF02567 Phenazine biosynthesis-like protein ABU16_1851 PF00881 Nitroreductase family ABU16_1852 PF14151 YfhD-like protein ABU16_1853 PF14152 YfhE-like protein ABU16_1854 PF08338 Domain of unknown function (DUF1731) ABU16_1854 PF01370 NAD dependent epimerase/dehydratase family ABU16_1855 PF02631 RecX family ABU16_1856 PF08838 Protein of unknown function (DUF1811) ABU16_1857 PF07690 Major Facilitator Superfamily ABU16_1858 PF08176 Small acid-soluble spore protein K family ABU16_1859 PF14043 WVELL protein ABU16_1860 PF08239 Bacterial SH3 domain ABU16_1861 PF13630 SdpI/YhfL protein family ABU16_1862 PF00561 alpha/beta hydrolase fold ABU16_1864 PF00535 Glycosyl transferase family 2 ABU16_1865 PF09586 Bacterial membrane protein YfhO ABU16_1866 PF04307 LexA-binding, inner membrane-associated putative hydrolase ABU16_1867 PF00730 HhH-GPD superfamily base excision DNA repair protein ABU16_1867 PF14815 NUDIX domain ABU16_1870 PF04259 Small, acid-soluble spore protein, gamma-type ABU16_1871 PF14182 YgaB-like protein ABU16_1872 PF04167 Protein of unknown function (DUF402) ABU16_1873 PF00664 ABC transporter transmembrane region ABU16_1873 PF00005 ABC transporter ABU16_1874 PF06081 Aromatic acid exporter family member 1 ABU16_1875 PF00202 Aminotransferase class-III ABU16_1876 PF00578 AhpC/TSA family ABU16_1877 PF01475 Ferric uptake regulator family ABU16_1878 PF11023 Zinc-ribbon containing domain ABU16_1879 PF14540 Nucleotidyltransferase-like ABU16_1879 PF18576 Helix-turn-helix domain ABU16_1880 PF07070 SpoOM protein ABU16_1882 PF07875 Coat F domain ABU16_1883 PF03575 Peptidase family S51 ABU16_1885 PF01964 Radical SAM ThiC family ABU16_1885 PF13667 ThiC-associated domain ABU16_1886 PF01565 FAD binding domain ABU16_1886 PF08031 Berberine and berberine like ABU16_1887 PF13040 Fur-regulated basic protein B ABU16_1888 PF06628 Catalase-related immune-responsive ABU16_1888 PF00199 Catalase ABU16_1889 PF00005 ABC transporter ABU16_1890 PF09084 NMT1/THI5 like ABU16_1891 PF00528 Binding-protein-dependent transport system inner membrane component ABU16_1892 PF00296 Luciferase-like monooxygenase ABU16_1894 PF00253 Ribosomal protein S14p/S29e ABU16_1896 PF01381 Helix-turn-helix ABU16_1898 PF08331 Domain of unknown function (DUF1730) ABU16_1899 PF12671 Putative amidase domain ABU16_1900 PF00588 SpoU rRNA Methylase family ABU16_1901 PF13171 Protein of unknown function (DUF4004) ABU16_1902 PF04519 Polymer-forming cytoskeletal ABU16_1905 PF08298 PrkA AAA domain ABU16_1905 PF06798 PrkA serine protein kinase C-terminal domain ABU16_1906 PF04285 Protein of unknown function (DUF444) ABU16_1907 PF01047 MarR family ABU16_1909 PF07690 Major Facilitator Superfamily ABU16_1910 PF03358 NADPH-dependent FMN reductase ABU16_1914 PF00392 Bacterial regulatory proteins, gntR family ABU16_1915 PF00005 ABC transporter ABU16_1916 PF00005 ABC transporter ABU16_1917 PF12679 ABC-2 family transporter protein ABU16_1918 PF00313 'Cold-shock' DNA-binding domain ABU16_1919 PF03180 NLPA lipoprotein ABU16_1920 PF07694 5TMR of 5TMR-LYT ABU16_1920 PF00990 Diguanylate cyclase, GGDEF domain ABU16_1921 PF00375 Sodium:dicarboxylate symporter family ABU16_1923 PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) ABU16_1925 PF00746 LPXTG cell wall anchor motif ABU16_1925 PF00149 Calcineurin-like phosphoesterase ABU16_1925 PF02872 5'-nucleotidase, C-terminal domain ABU16_1925 PF00565 Staphylococcal nuclease homologue ABU16_1926 PF04203 Sortase domain ABU16_1927 PF01479 S4 domain ABU16_1927 PF00849 RNA pseudouridylate synthase ABU16_1928 PF17326 Family of unknown function (DUF5365) ABU16_1929 PF00571 CBS domain ABU16_1930 PF13419 Haloacid dehalogenase-like hydrolase ABU16_1931 PF00795 Carbon-nitrogen hydrolase ABU16_1931 PF00583 Acetyltransferase (GNAT) family ABU16_1933 PF00202 Aminotransferase class-III ABU16_1934 PF04309 Glycerol-3-phosphate responsive antiterminator ABU16_1935 PF00230 Major intrinsic protein ABU16_1936 PF00370 FGGY family of carbohydrate kinases, N-terminal domain ABU16_1936 PF02782 FGGY family of carbohydrate kinases, C-terminal domain ABU16_1937 PF16901 C-terminal domain of alpha-glycerophosphate oxidase ABU16_1937 PF01266 FAD dependent oxidoreductase ABU16_1938 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I ABU16_1938 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III ABU16_1938 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain ABU16_1938 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II ABU16_1939 PF13185 GAF domain ABU16_1939 PF07730 Histidine kinase ABU16_1940 PF00072 Response regulator receiver domain ABU16_1940 PF00196 Bacterial regulatory proteins, luxR family ABU16_1941 PF03358 NADPH-dependent FMN reductase ABU16_1942 PF14148 YhdB-like protein ABU16_1943 PF13028 Protein of unknown function (DUF3889) ABU16_1944 PF00877 NlpC/P60 family ABU16_1944 PF01476 LysM domain ABU16_1945 PF02082 Transcriptional regulator ABU16_1946 PF05552 Conserved TM helix ABU16_1947 PF04293 SpoVR like protein ABU16_1948 PF00245 Alkaline phosphatase ABU16_1949 PF01476 LysM domain ABU16_1949 PF00877 NlpC/P60 family ABU16_1950 PF03466 LysR substrate binding domain ABU16_1950 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABU16_1951 PF00285 Citrate synthase, C-terminal domain ABU16_1953 PF13520 Amino acid permease ABU16_1954 PF00209 Sodium:neurotransmitter symporter family ABU16_1955 PF00155 Aminotransferase class I and II ABU16_1955 PF00392 Bacterial regulatory proteins, gntR family ABU16_1956 PF00583 Acetyltransferase (GNAT) family ABU16_1957 PF17453 Sigma-M inhibitor ABU16_1958 PF13791 Sigma factor regulator C-terminal ABU16_1958 PF13800 Sigma factor regulator N-terminal ABU16_1959 PF04542 Sigma-70 region 2 ABU16_1959 PF08281 Sigma-70, region 4 ABU16_1960 PF00248 Aldo/keto reductase family ABU16_1961 PF01553 Acyltransferase ABU16_1962 PF03471 Transporter associated domain ABU16_1962 PF01595 Cyclin M transmembrane N-terminal domain ABU16_1962 PF00571 CBS domain ABU16_1963 PF13411 MerR HTH family regulatory protein ABU16_1964 PF00155 Aminotransferase class I and II ABU16_1966 PF01595 Cyclin M transmembrane N-terminal domain ABU16_1966 PF00571 CBS domain ABU16_1966 PF03471 Transporter associated domain ABU16_1967 PF02537 CrcB-like protein, Camphor Resistance (CrcB) ABU16_1968 PF02537 CrcB-like protein, Camphor Resistance (CrcB) ABU16_1969 PF03009 Glycerophosphoryl diester phosphodiesterase family ABU16_1970 PF17444 Uncharacterized YhdX-like ABU16_1971 PF00924 Mechanosensitive ion channel ABU16_1972 PF02146 Sir2 family ABU16_1973 PF01522 Polysaccharide deacetylase ABU16_1974 PF01063 Amino-transferase class IV ABU16_1975 PF03553 Na+/H+ antiporter family ABU16_1976 PF00582 Universal stress protein family ABU16_1978 PF00005 ABC transporter ABU16_1978 PF00664 ABC transporter transmembrane region ABU16_1979 PF00005 ABC transporter ABU16_1979 PF00664 ABC transporter transmembrane region ABU16_1980 PF13460 NAD(P)H-binding ABU16_1982 PF00269 Small, acid-soluble spore proteins, alpha/beta type ABU16_1983 PF17277 Family of unknown function (DUF5342) ABU16_1984 PF14398 YheC/D like ATP-grasp ABU16_1985 PF14398 YheC/D like ATP-grasp ABU16_1986 PF04286 Protein of unknown function (DUF445) ABU16_1987 PF06133 Control of competence regulator ComK, YlbF/YmcA ABU16_1988 PF08713 DNA alkylation repair enzyme ABU16_1990 PF04055 Radical SAM superfamily ABU16_1991 PF00999 Sodium/hydrogen exchanger family ABU16_1992 PF02080 TrkA-C domain ABU16_1994 PF00378 Enoyl-CoA hydratase/isomerase ABU16_1995 PF14120 YhzD-like protein ABU16_1996 PF00005 ABC transporter ABU16_1996 PF13732 Domain of unknown function (DUF4162) ABU16_1998 PF00149 Calcineurin-like phosphoesterase ABU16_1999 PF13514 AAA domain ABU16_2000 PF01966 HD domain ABU16_2001 PF14147 Sporulation protein YhaL ABU16_2004 PF11667 Putative zincin peptidase ABU16_2005 PF08963 Protein of unknown function (DUF1878) ABU16_2006 PF01047 MarR family ABU16_2007 PF12732 YtxH-like protein ABU16_2009 PF17099 Tryptophan transporter TrpP ABU16_2010 PF00266 Aminotransferase class-V ABU16_2011 PF01230 HIT domain ABU16_2012 PF00005 ABC transporter ABU16_2013 PF05975 Bacterial ABC transporter protein EcsB ABU16_2014 PF12787 EcsC protein family ABU16_2015 PF07687 Peptidase dimerisation domain ABU16_2015 PF01546 Peptidase family M20/M25/M40 ABU16_2018 PF03992 Antibiotic biosynthesis monooxygenase ABU16_2019 PF00912 Transglycosylase ABU16_2019 PF00905 Penicillin binding protein transpeptidase domain ABU16_2020 PF01208 Uroporphyrinogen decarboxylase (URO-D) ABU16_2023 PF00440 Bacterial regulatory proteins, tetR family ABU16_2023 PF17932 Tetracyclin repressor-like, C-terminal domain ABU16_2025 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III ABU16_2025 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal ABU16_2026 PF10086 YhfC intramembrane metalloprotease ABU16_2028 PF05343 M42 glutamyl aminopeptidase ABU16_2029 PF04266 ASCH domain ABU16_2030 PF00375 Sodium:dicarboxylate symporter family ABU16_2031 PF14149 YhfH-like protein ABU16_2032 PF12706 Beta-lactamase superfamily domain ABU16_2033 PF03099 Biotin/lipoate A/B protein ligase family ABU16_2033 PF10437 Bacterial lipoate protein ligase C-terminus ABU16_2034 PF13460 NAD(P)H-binding ABU16_2035 PF13193 AMP-binding enzyme C-terminal domain ABU16_2035 PF00501 AMP-binding enzyme ABU16_2037 PF01435 Peptidase family M48 ABU16_2037 PF16491 CAAX prenyl protease N-terminal, five membrane helices ABU16_2038 PF00082 Subtilase family ABU16_2038 PF05922 Peptidase inhibitor I9 ABU16_2040 PF00583 Acetyltransferase (GNAT) family ABU16_2041 PF00107 Zinc-binding dehydrogenase ABU16_2041 PF08240 Alcohol dehydrogenase GroES-like domain ABU16_2043 PF01497 Periplasmic binding protein ABU16_2044 PF00300 Histidine phosphatase superfamily (branch 1) ABU16_2045 PF02803 Thiolase, C-terminal domain ABU16_2045 PF00108 Thiolase, N-terminal domain ABU16_2046 PF13193 AMP-binding enzyme C-terminal domain ABU16_2046 PF00501 AMP-binding enzyme ABU16_2047 PF02632 BioY family ABU16_2048 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ABU16_2049 PF01266 FAD dependent oxidoreductase ABU16_2049 PF00355 Rieske [2Fe-2S] domain ABU16_2051 PF08858 IDEAL domain ABU16_2052 PF06338 ComK protein ABU16_2055 PF05901 Excalibur calcium-binding domain ABU16_2056 PF00474 Sodium:solute symporter family ABU16_2057 PF11755 Protein of unknown function (DUF3311) ABU16_2059 PF09335 SNARE associated Golgi protein ABU16_2060 PF10502 Signal peptidase, peptidase S26 ABU16_2061 PF01494 FAD binding domain ABU16_2062 PF01047 MarR family ABU16_2063 PF07690 Major Facilitator Superfamily ABU16_2064 PF01408 Oxidoreductase family, NAD-binding Rossmann fold ABU16_2064 PF02894 Oxidoreductase family, C-terminal alpha/beta domain ABU16_2065 PF05116 Sucrose-6F-phosphate phosphohydrolase ABU16_2066 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family ABU16_2067 PF00356 Bacterial regulatory proteins, lacI family ABU16_2068 PF05145 Transition state regulatory protein AbrB ABU16_2069 PF07690 Major Facilitator Superfamily ABU16_2070 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle ABU16_2070 PF12793 Sugar transport-related sRNA regulator N-term ABU16_2072 PF02915 Rubrerythrin ABU16_2073 PF13361 UvrD-like helicase C-terminal domain ABU16_2073 PF12705 PD-(D/E)XK nuclease superfamily ABU16_2074 PF12705 PD-(D/E)XK nuclease superfamily ABU16_2074 PF00580 UvrD/REP helicase N-terminal domain ABU16_2074 PF13361 UvrD-like helicase C-terminal domain ABU16_2075 PF12320 Type 5 capsule protein repressor C-terminal domain ABU16_2075 PF00149 Calcineurin-like phosphoesterase ABU16_2076 PF13476 AAA domain ABU16_2078 PF10676 Spore germination protein gerPA/gerPF ABU16_2079 PF10970 Spore germination protein GerPE ABU16_2081 PF10737 Spore germination protein GerPC ABU16_2082 PF10803 Spore germination GerPB ABU16_2083 PF10676 Spore germination protein gerPA/gerPF ABU16_2085 PF09388 Spo0E like sporulation regulatory protein ABU16_2086 PF08757 CotH kinase protein ABU16_2087 PF01557 Fumarylacetoacetate (FAA) hydrolase family ABU16_2088 PF07457 Protein of unknown function (DUF1516) ABU16_2089 PF00082 Subtilase family ABU16_2089 PF17936 Bacterial Ig domain ABU16_2090 PF10949 Protein of unknown function (DUF2777) ABU16_2091 PF13537 Glutamine amidotransferase domain ABU16_2091 PF00733 Asparagine synthase ABU16_2092 PF05163 DinB family ABU16_2094 PF01554 MatE ABU16_2095 PF02311 AraC-like ligand binding domain ABU16_2095 PF12833 Helix-turn-helix domain ABU16_2096 PF00356 Bacterial regulatory proteins, lacI family ABU16_2097 PF01408 Oxidoreductase family, NAD-binding Rossmann fold ABU16_2097 PF02894 Oxidoreductase family, C-terminal alpha/beta domain ABU16_2098 PF05163 DinB family ABU16_2099 PF01810 LysE type translocator ABU16_2100 PF00155 Aminotransferase class I and II ABU16_2100 PF00392 Bacterial regulatory proteins, gntR family ABU16_2101 PF13599 Pentapeptide repeats (9 copies) ABU16_2102 PF08386 TAP-like protein ABU16_2102 PF00561 alpha/beta hydrolase fold ABU16_2104 PF01747 ATP-sulfurylase ABU16_2104 PF14306 PUA-like domain ABU16_2105 PF01507 Phosphoadenosine phosphosulfate reductase family ABU16_2106 PF04029 2-phosphosulpholactate phosphatase ABU16_2107 PF02679 (2R)-phospho-3-sulfolactate synthase (ComA) ABU16_2108 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 ABU16_2109 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain ABU16_2109 PF13378 Enolase C-terminal domain-like ABU16_2110 PF07690 Major Facilitator Superfamily ABU16_2111 PF13673 Acetyltransferase (GNAT) domain ABU16_2111 PF18014 Acetyltransferase (GNAT) domain ABU16_2112 PF13673 Acetyltransferase (GNAT) domain ABU16_2113 PF02574 Homocysteine S-methyltransferase ABU16_2113 PF02219 Methylenetetrahydrofolate reductase ABU16_2115 PF04461 Protein of unknown function (DUF520) ABU16_2116 PF17783 CvfB-like winged helix domain ABU16_2116 PF13509 S1 domain ABU16_2119 PF17418 Sporulation delaying protein SdpA ABU16_2120 PF03551 Transcriptional regulator PadR-like family ABU16_2122 PF12650 Domain of unknown function (DUF3784) ABU16_2123 PF01447 Thermolysin metallopeptidase, catalytic domain ABU16_2123 PF03413 Peptidase propeptide and YPEB domain ABU16_2123 PF02868 Thermolysin metallopeptidase, alpha-helical domain ABU16_2123 PF07504 Fungalysin/Thermolysin Propeptide Motif ABU16_2124 PF02645 Uncharacterised protein, DegV family COG1307 ABU16_2125 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 ABU16_2125 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) ABU16_2126 PF12690 Intracellular proteinase inhibitor ABU16_2127 PF12758 Protein of unknown function (DUF3813) ABU16_2129 PF00326 Prolyl oligopeptidase family ABU16_2130 PF01883 Iron-sulfur cluster assembly protein ABU16_2132 PF01565 FAD binding domain ABU16_2133 PF07690 Major Facilitator Superfamily ABU16_2134 PF02774 Semialdehyde dehydrogenase, dimerisation domain ABU16_2134 PF01118 Semialdehyde dehydrogenase, NAD binding domain ABU16_2135 PF01960 ArgJ family ABU16_2136 PF00696 Amino acid kinase family ABU16_2137 PF00202 Aminotransferase class-III ABU16_2138 PF00117 Glutamine amidotransferase class-I ABU16_2138 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain ABU16_2139 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain ABU16_2139 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain ABU16_2140 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain ABU16_2140 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain ABU16_2141 PF14168 YjzC-like protein ABU16_2142 PF11151 Protein of unknown function (DUF2929) ABU16_2146 PF02608 ABC transporter substrate-binding protein PnrA-like ABU16_2147 PF10815 ComZ ABU16_2149 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal ABU16_2149 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III ABU16_2150 PF00109 Beta-ketoacyl synthase, N-terminal domain ABU16_2150 PF02801 Beta-ketoacyl synthase, C-terminal domain ABU16_2151 PF10026 Predicted Zn-dependent protease (DUF2268) ABU16_2152 PF08352 Oligopeptide/dipeptide transporter, C-terminal region ABU16_2152 PF00005 ABC transporter ABU16_2153 PF00005 ABC transporter ABU16_2153 PF08352 Oligopeptide/dipeptide transporter, C-terminal region ABU16_2154 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle ABU16_2155 PF00528 Binding-protein-dependent transport system inner membrane component ABU16_2156 PF00528 Binding-protein-dependent transport system inner membrane component ABU16_2156 PF12911 N-terminal TM domain of oligopeptide transport permease C ABU16_2157 PF12227 Protein of unknown function (DUF3603) ABU16_2158 PF00579 tRNA synthetases class I (W and Y) ABU16_2159 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle ABU16_2160 PF00528 Binding-protein-dependent transport system inner membrane component ABU16_2162 PF07690 Major Facilitator Superfamily ABU16_2163 PF13508 Acetyltransferase (GNAT) domain ABU16_2164 PF03960 ArsC family ABU16_2165 PF03741 Integral membrane protein TerC family ABU16_2166 PF05389 Negative regulator of genetic competence (MecA) ABU16_2168 PF06054 Competence protein CoiA-like family ABU16_2169 PF01432 Peptidase family M3 ABU16_2169 PF08439 Oligopeptidase F ABU16_2172 PF01152 Bacterial-like globin ABU16_2173 PF01464 Transglycosylase SLT domain ABU16_2174 PF01928 CYTH domain ABU16_2176 PF04607 Region found in RelA / SpoT proteins ABU16_2177 PF01513 ATP-NAD kinase ABU16_2178 PF00849 RNA pseudouridylate synthase ABU16_2179 PF00849 RNA pseudouridylate synthase ABU16_2180 PF00149 Calcineurin-like phosphoesterase ABU16_2181 PF02254 TrkA-N domain ABU16_2181 PF00999 Sodium/hydrogen exchanger family ABU16_2181 PF02080 TrkA-C domain ABU16_2182 PF03070 TENA/THI-4/PQQC family ABU16_2183 PF02581 Thiamine monophosphate synthase ABU16_2184 PF01266 FAD dependent oxidoreductase ABU16_2185 PF02597 ThiS family ABU16_2186 PF05690 Thiazole biosynthesis protein ThiG ABU16_2187 PF00899 ThiF family ABU16_2188 PF08543 Phosphomethylpyrimidine kinase ABU16_2190 PF14153 Spore coat protein CotO ABU16_2192 PF10612 Spore coat protein Z ABU16_2193 PF10612 Spore coat protein Z ABU16_2194 PF07552 Spore Coat Protein X and V domain ABU16_2196 PF07552 Spore Coat Protein X and V domain ABU16_2197 PF07098 Protein of unknown function (DUF1360) ABU16_2201 PF14069 Stage VI sporulation protein F ABU16_2202 PF13361 UvrD-like helicase C-terminal domain ABU16_2202 PF00580 UvrD/REP helicase N-terminal domain ABU16_2204 PF13673 Acetyltransferase (GNAT) domain ABU16_2206 PF00756 Putative esterase ABU16_2208 PF01053 Cys/Met metabolism PLP-dependent enzyme ABU16_2209 PF01053 Cys/Met metabolism PLP-dependent enzyme ABU16_2210 PF13302 Acetyltransferase (GNAT) domain ABU16_2211 PF05684 Protein of unknown function (DUF819) ABU16_2212 PF18593 CdiI immunity protein ABU16_2215 PF14411 A nuclease of the HNH/ENDO VII superfamily with conserved LHH ABU16_2215 PF04740 LXG domain of WXG superfamily ABU16_2218 PF08863 YolD-like protein ABU16_2222 PF18593 CdiI immunity protein ABU16_2224 PF03992 Antibiotic biosynthesis monooxygenase ABU16_2226 PF02368 Bacterial Ig-like domain (group 2) ABU16_2227 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 ABU16_2227 PF05043 Mga helix-turn-helix domain ABU16_2227 PF00874 PRD domain ABU16_2227 PF08279 HTH domain ABU16_2228 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit ABU16_2228 PF02378 Phosphotransferase system, EIIC ABU16_2228 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 ABU16_2229 PF01238 Phosphomannose isomerase type I ABU16_2230 PF11208 Protein of unknown function (DUF2992) ABU16_2231 PF13302 Acetyltransferase (GNAT) domain ABU16_2232 PF04073 Aminoacyl-tRNA editing domain ABU16_2233 PF13783 Domain of unknown function (DUF4177) ABU16_2234 PF14154 Domain of unknown function (DUF4306) ABU16_2236 PF01040 UbiA prenyltransferase family ABU16_2238 PF13739 Deacetylase PdaC ABU16_2238 PF01522 Polysaccharide deacetylase ABU16_2238 PF11738 Protein of unknown function (DUF3298) ABU16_2239 PF10901 Protein of unknown function (DUF2690) ABU16_2240 PF14070 Putative motility protein ABU16_2242 PF10026 Predicted Zn-dependent protease (DUF2268) ABU16_2243 PF10990 Protein of unknown function (DUF2809) ABU16_2244 PF14172 Domain of unknown function (DUF4309) ABU16_2245 PF12838 4Fe-4S dicluster domain ABU16_2245 PF00384 Molybdopterin oxidoreductase ABU16_2245 PF01568 Molydopterin dinucleotide binding domain ABU16_2245 PF04879 Molybdopterin oxidoreductase Fe4S4 domain ABU16_2245 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region ABU16_2246 PF07849 Protein of unknown function (DUF1641) ABU16_2247 PF11611 Domain of unknown function (DUF4352) ABU16_2248 PF00293 NUDIX domain ABU16_2250 PF00067 Cytochrome P450 ABU16_2251 PF04101 Glycosyltransferase family 28 C-terminal domain ABU16_2253 PF02602 Uroporphyrinogen-III synthase HemD ABU16_2254 PF03649 Uncharacterised protein family (UPF0014) ABU16_2255 PF00005 ABC transporter ABU16_2256 PF13536 Putative multidrug resistance efflux transporter ABU16_2259 PF07849 Protein of unknown function (DUF1641) ABU16_2260 PF07992 Pyridine nucleotide-disulphide oxidoreductase ABU16_2261 PF02614 Glucuronate isomerase ABU16_2263 PF02615 Malate/L-lactate dehydrogenase ABU16_2264 PF00107 Zinc-binding dehydrogenase ABU16_2264 PF08240 Alcohol dehydrogenase GroES-like domain ABU16_2265 PF03786 D-mannonate dehydratase (UxuA) ABU16_2266 PF00106 short chain dehydrogenase ABU16_2267 PF07690 Major Facilitator Superfamily ABU16_2268 PF00356 Bacterial regulatory proteins, lacI family ABU16_2269 PF01232 Mannitol dehydrogenase Rossmann domain ABU16_2269 PF08125 Mannitol dehydrogenase C-terminal domain ABU16_2270 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus ABU16_2270 PF08666 SAF domain ABU16_2271 PF01925 Sulfite exporter TauE/SafE ABU16_2272 PF05163 DinB family ABU16_2273 PF00004 ATPase family associated with various cellular activities (AAA) ABU16_2274 PF18801 response regulator aspartate phosphatase H, N terminal ABU16_2276 PF03795 YCII-related domain ABU16_2277 PF01510 N-acetylmuramoyl-L-alanine amidase ABU16_2277 PF01476 LysM domain ABU16_2277 PF01471 Putative peptidoglycan binding domain ABU16_2278 PF08000 Bacterial PH domain ABU16_2279 PF05908 Poly-gamma-glutamate hydrolase ABU16_2280 PF05067 Manganese containing catalase ABU16_2281 PF06114 IrrE N-terminal-like domain ABU16_2282 PF01381 Helix-turn-helix ABU16_2286 PF01695 IstB-like ATP binding protein ABU16_2289 PF17356 Phage-like element PBSX protein XtrA ABU16_2290 PF08281 Sigma-70, region 4 ABU16_2291 PF03592 Terminase small subunit ABU16_2291 PF10668 Phage terminase small subunit ABU16_2292 PF17288 Terminase RNAseH like domain ABU16_2292 PF04466 Phage terminase large subunit ABU16_2293 PF04860 Phage portal protein ABU16_2294 PF14550 Putative phage serine protease XkdF ABU16_2295 PF05065 Phage capsid family ABU16_2296 PF11436 Protein of unknown function (DUF3199) ABU16_2297 PF12206 Domain of unknown function (DUF3599) ABU16_2298 PF04883 Bacteriophage HK97-gp10, putative tail-component ABU16_2301 PF17481 Phage tail sheath protein beta-sandwich domain ABU16_2301 PF17482 Phage tail sheath C-terminal domain ABU16_2301 PF04984 Phage tail sheath protein subtilisin-like domain ABU16_2302 PF09393 Phage tail tube protein ABU16_2303 PF08890 Phage XkdN-like tail assembly chaperone protein, TAC ABU16_2304 PF01464 Transglycosylase SLT domain ABU16_2305 PF01476 LysM domain ABU16_2307 PF10844 Protein of unknown function (DUF2577) ABU16_2308 PF10934 Protein of unknown function (DUF2634) ABU16_2309 PF04865 Baseplate J-like protein ABU16_2310 PF10076 Uncharacterised protein conserved in bacteria (DUF2313) ABU16_2313 PF09636 XkdW protein ABU16_2314 PF09693 Phage uncharacterised protein (Phage_XkdX) ABU16_2316 PF10779 Haemolysin XhlA ABU16_2317 PF04688 SPP1 phage holin ABU16_2318 PF01510 N-acetylmuramoyl-L-alanine amidase ABU16_2318 PF01476 LysM domain ABU16_2318 PF01471 Putative peptidoglycan binding domain ABU16_2320 PF14185 Antitoxin SpoIISB, type II toxin-antitoxin system ABU16_2321 PF14171 Toxin SpoIISA, type II toxin-antitoxin system ABU16_2322 PF01384 Phosphate transporter family ABU16_2323 PF01865 Protein of unknown function DUF47 ABU16_2324 PF13520 Amino acid permease ABU16_2325 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily ABU16_2326 PF13231 Dolichyl-phosphate-mannose-protein mannosyltransferase ABU16_2327 PF00535 Glycosyl transferase family 2 ABU16_2329 PF13180 PDZ domain ABU16_2330 PF14748 Pyrroline-5-carboxylate reductase dimerisation ABU16_2330 PF03807 NADP oxidoreductase coenzyme F420-dependent ABU16_2331 PF04951 D-aminopeptidase ABU16_2332 PF00528 Binding-protein-dependent transport system inner membrane component ABU16_2333 PF00528 Binding-protein-dependent transport system inner membrane component ABU16_2333 PF12911 N-terminal TM domain of oligopeptide transport permease C ABU16_2334 PF00005 ABC transporter ABU16_2334 PF08352 Oligopeptide/dipeptide transporter, C-terminal region ABU16_2335 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle ABU16_2337 PF17676 LD-carboxypeptidase C-terminal domain ABU16_2337 PF02016 LD-carboxypeptidase N-terminal domain ABU16_2338 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain ABU16_2338 PF13378 Enolase C-terminal domain-like ABU16_2339 PF00877 NlpC/P60 family ABU16_2340 PF00005 ABC transporter ABU16_2340 PF08352 Oligopeptide/dipeptide transporter, C-terminal region ABU16_2341 PF10282 Lactonase, 7-bladed beta-propeller ABU16_2343 PF03061 Thioesterase superfamily ABU16_2344 PF00970 Oxidoreductase FAD-binding domain ABU16_2344 PF00042 Globin ABU16_2344 PF00175 Oxidoreductase NAD-binding domain ABU16_2346 PF04239 Protein of unknown function (DUF421) ABU16_2347 PF12867 DinB superfamily ABU16_2348 PF13302 Acetyltransferase (GNAT) domain ABU16_2349 PF00893 Small Multidrug Resistance protein ABU16_2350 PF00893 Small Multidrug Resistance protein ABU16_2351 PF00551 Formyl transferase ABU16_2351 PF01842 ACT domain ABU16_2352 PF01472 PUA domain ABU16_2352 PF00696 Amino acid kinase family ABU16_2353 PF00171 Aldehyde dehydrogenase family ABU16_2354 PF02566 OsmC-like protein ABU16_2355 PF01047 MarR family ABU16_2356 PF02566 OsmC-like protein ABU16_2358 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region ABU16_2359 PF08267 Cobalamin-independent synthase, N-terminal domain ABU16_2359 PF01717 Cobalamin-independent synthase, Catalytic domain ABU16_2361 PF00082 Subtilase family ABU16_2363 PF01740 STAS domain ABU16_2364 PF02361 Cobalt transport protein ABU16_2365 PF00005 ABC transporter ABU16_2366 PF09819 ABC-type cobalt transport system, permease component ABU16_2367 PF07615 YKOF-related Family ABU16_2368 PF00072 Response regulator receiver domain ABU16_2368 PF00486 Transcriptional regulatory protein, C terminal ABU16_2369 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABU16_2369 PF00512 His Kinase A (phospho-acceptor) domain ABU16_2369 PF00672 HAMP domain ABU16_2370 PF03413 Peptidase propeptide and YPEB domain ABU16_2371 PF03413 Peptidase propeptide and YPEB domain ABU16_2372 PF11132 Transcriptional regulator protein (SplA) ABU16_2373 PF01769 Divalent cation transporter ABU16_2373 PF03448 MgtE intracellular N domain ABU16_2373 PF00571 CBS domain ABU16_2374 PF13411 MerR HTH family regulatory protein ABU16_2377 PF01047 MarR family ABU16_2378 PF06925 Monogalactosyldiacylglycerol (MGDG) synthase ABU16_2380 PF00149 Calcineurin-like phosphoesterase ABU16_2382 PF00535 Glycosyl transferase family 2 ABU16_2383 PF01068 ATP dependent DNA ligase domain ABU16_2384 PF02735 Ku70/Ku80 beta-barrel domain ABU16_2385 PF00563 EAL domain ABU16_2385 PF03707 Bacterial signalling protein N terminal repeat ABU16_2385 PF00990 Diguanylate cyclase, GGDEF domain ABU16_2386 PF09335 SNARE associated Golgi protein ABU16_2388 PF03741 Integral membrane protein TerC family ABU16_2389 PF04542 Sigma-70 region 2 ABU16_2390 PF12791 Anti-sigma factor N-terminus ABU16_2391 PF00269 Small, acid-soluble spore proteins, alpha/beta type ABU16_2392 PF08876 Domain of unknown function (DUF1836) ABU16_2393 PF01435 Peptidase family M48 ABU16_2394 PF02386 Cation transport protein ABU16_2397 PF01757 Acyltransferase family ABU16_2398 PF13426 PAS domain ABU16_2398 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABU16_2398 PF00512 His Kinase A (phospho-acceptor) domain ABU16_2398 PF13188 PAS domain ABU16_2398 PF00989 PAS fold ABU16_2399 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain ABU16_2399 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain ABU16_2401 PF01008 Initiation factor 2 subunit family ABU16_2402 PF01636 Phosphotransferase enzyme family ABU16_2403 PF00795 Carbon-nitrogen hydrolase ABU16_2404 PF00155 Aminotransferase class I and II ABU16_2405 PF00016 Ribulose bisphosphate carboxylase large chain, catalytic domain ABU16_2405 PF02788 Ribulose bisphosphate carboxylase large chain, N-terminal domain ABU16_2407 PF00596 Class II Aldolase and Adducin N-terminal domain ABU16_2408 PF03079 ARD/ARD' family ABU16_2409 PF06803 Protein of unknown function (DUF1232) ABU16_2410 PF09388 Spo0E like sporulation regulatory protein ABU16_2412 PF00512 His Kinase A (phospho-acceptor) domain ABU16_2412 PF02743 Cache domain ABU16_2412 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABU16_2413 PF01047 MarR family ABU16_2414 PF13677 Membrane MotB of proton-channel complex MotA/MotB ABU16_2414 PF00691 OmpA family ABU16_2415 PF01618 MotA/TolQ/ExbB proton channel family ABU16_2416 PF00004 ATPase family associated with various cellular activities (AAA) ABU16_2416 PF07724 AAA domain (Cdc48 subfamily) ABU16_2416 PF17871 AAA lid domain ABU16_2416 PF10431 C-terminal, D2-small domain, of ClpB protein ABU16_2418 PF06508 Queuosine biosynthesis protein QueC ABU16_2419 PF01242 6-pyruvoyl tetrahydropterin synthase ABU16_2420 PF04055 Radical SAM superfamily ABU16_2421 PF14489 QueF-like protein ABU16_2423 PF01638 HxlR-like helix-turn-helix ABU16_2425 PF01476 LysM domain ABU16_2426 PF01476 LysM domain ABU16_2427 PF00704 Glycosyl hydrolases family 18 ABU16_2430 PF11514 Protein of unknown function (DUF3219) ABU16_2431 PF09953 Uncharacterized protein conserved in bacteria (DUF2187) ABU16_2434 PF07486 Cell Wall Hydrolase ABU16_2435 PF01943 Polysaccharide biosynthesis protein ABU16_2436 PF00578 AhpC/TSA family ABU16_2439 PF00557 Metallopeptidase family M24 ABU16_2439 PF01321 Creatinase/Prolidase N-terminal domain ABU16_2441 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family ABU16_2441 PF00356 Bacterial regulatory proteins, lacI family ABU16_2442 PF00874 PRD domain ABU16_2442 PF03123 CAT RNA binding domain ABU16_2443 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 ABU16_2443 PF00367 phosphotransferase system, EIIB ABU16_2443 PF02378 Phosphotransferase system, EIIC ABU16_2444 PF00381 PTS HPr component phosphorylation site ABU16_2445 PF02896 PEP-utilising enzyme, TIM barrel domain ABU16_2445 PF00391 PEP-utilising enzyme, mobile domain ABU16_2445 PF05524 PEP-utilising enzyme, N-terminal ABU16_2446 PF11132 Transcriptional regulator protein (SplA) ABU16_2448 PF00583 Acetyltransferase (GNAT) family ABU16_2449 PF02743 Cache domain ABU16_2449 PF00672 HAMP domain ABU16_2449 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ABU16_2450 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase ABU16_2450 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase ABU16_2451 PF00188 Cysteine-rich secretory protein family ABU16_2452 PF03717 Penicillin-binding Protein dimerisation domain ABU16_2452 PF00905 Penicillin binding protein transpeptidase domain ABU16_2453 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABU16_2453 PF00512 His Kinase A (phospho-acceptor) domain ABU16_2453 PF00989 PAS fold ABU16_2453 PF08447 PAS fold ABU16_2454 PF00155 Aminotransferase class I and II ABU16_2456 PF01584 CheW-like domain ABU16_2456 PF00072 Response regulator receiver domain ABU16_2457 PF14177 YkyB-like protein ABU16_2458 PF07690 Major Facilitator Superfamily ABU16_2459 PF01476 LysM domain ABU16_2459 PF03734 L,D-transpeptidase catalytic domain ABU16_2460 PF10518 TAT (twin-arginine translocation) pathway signal sequence ABU16_2460 PF00149 Calcineurin-like phosphoesterase ABU16_2462 PF01471 Putative peptidoglycan binding domain ABU16_2462 PF08924 Domain of unknown function (DUF1906) ABU16_2465 PF10388 EAL-domain associated signalling protein domain ABU16_2465 PF00563 EAL domain ABU16_2467 PF08796 Protein of unknown function (DUF1797) ABU16_2468 PF04308 Ribonuclease H-like ABU16_2469 PF14156 Antirepressor AbbA ABU16_2471 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABU16_2471 PF03466 LysR substrate binding domain ABU16_2472 PF00258 Flavodoxin ABU16_2474 PF00258 Flavodoxin ABU16_2475 PF08503 Tetrahydrodipicolinate succinyltransferase N-terminal ABU16_2475 PF14602 Hexapeptide repeat of succinyl-transferase ABU16_2475 PF00132 Bacterial transferase hexapeptide (six repeats) ABU16_2476 PF07687 Peptidase dimerisation domain ABU16_2476 PF01546 Peptidase family M20/M25/M40 ABU16_2477 PF03698 Uncharacterised protein family (UPF0180) ABU16_2478 PF00924 Mechanosensitive ion channel ABU16_2479 PF10417 C-terminal domain of 1-Cys peroxiredoxin ABU16_2479 PF00578 AhpC/TSA family ABU16_2480 PF00578 AhpC/TSA family ABU16_2483 PF12804 MobA-like NTP transferase domain ABU16_2484 PF00899 ThiF family ABU16_2485 PF03453 MoeA N-terminal region (domain I and II) ABU16_2485 PF00994 Probable molybdopterin binding domain ABU16_2485 PF03454 MoeA C-terminal region (domain IV) ABU16_2486 PF03205 Molybdopterin guanine dinucleotide synthesis protein B ABU16_2487 PF02391 MoaE protein ABU16_2488 PF02597 ThiS family ABU16_2489 PF00005 ABC transporter ABU16_2489 PF00664 ABC transporter transmembrane region ABU16_2490 PF00005 ABC transporter ABU16_2490 PF00664 ABC transporter transmembrane region ABU16_2491 PF04893 Yip1 domain ABU16_2492 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion ABU16_2493 PF00005 ABC transporter ABU16_2494 PF12704 MacB-like periplasmic core domain ABU16_2494 PF02687 FtsX-like permease family ABU16_2495 PF08220 DeoR-like helix-turn-helix domain ABU16_2495 PF00455 DeoR C terminal sensor domain ABU16_2496 PF00294 pfkB family carbohydrate kinase ABU16_2497 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 ABU16_2497 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit ABU16_2498 PF10502 Signal peptidase, peptidase S26 ABU16_2500 PF12848 ABC transporter ABU16_2500 PF00005 ABC transporter ABU16_2501 PF08546 Ketopantoate reductase PanE/ApbA C terminal ABU16_2501 PF02558 Ketopantoate reductase PanE/ApbA ABU16_2502 PF02073 Thermophilic metalloprotease (M29) ABU16_2503 PF17447 Uncharacterized YkpC-like ABU16_2505 PF18277 AbrB C-terminal domain ABU16_2505 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin ABU16_2506 PF00989 PAS fold ABU16_2506 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABU16_2506 PF00512 His Kinase A (phospho-acceptor) domain ABU16_2507 PF06094 Gamma-glutamyl cyclotransferase, AIG2-like ABU16_2508 PF02080 TrkA-C domain ABU16_2508 PF02254 TrkA-N domain ABU16_2509 PF01979 Amidohydrolase family ABU16_2509 PF13382 Adenine deaminase C-terminal domain ABU16_2510 PF00753 Metallo-beta-lactamase superfamily ABU16_2510 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain ABU16_2510 PF17770 Ribonuclease J C-terminal domain ABU16_2514 PF01327 Polypeptide deformylase ABU16_2516 PF10368 Putative cell-wall binding lipoprotein ABU16_2517 PF00676 Dehydrogenase E1 component ABU16_2518 PF02780 Transketolase, C-terminal domain ABU16_2518 PF02779 Transketolase, pyrimidine binding domain ABU16_2519 PF00364 Biotin-requiring enzyme ABU16_2519 PF02817 e3 binding domain ABU16_2519 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) ABU16_2520 PF07992 Pyridine nucleotide-disulphide oxidoreductase ABU16_2520 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain ABU16_2522 PF13790 SR1 protein ABU16_2523 PF01276 Orn/Lys/Arg decarboxylase, major domain ABU16_2523 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain ABU16_2524 PF05256 Uncharacterised protein family (UPF0223) ABU16_2525 PF06335 Protein of unknown function (DUF1054) ABU16_2528 PF00459 Inositol monophosphatase family ABU16_2529 PF00583 Acetyltransferase (GNAT) family ABU16_2530 PF04072 Leucine carboxyl methyltransferase ABU16_2532 PF07504 Fungalysin/Thermolysin Propeptide Motif ABU16_2532 PF02868 Thermolysin metallopeptidase, alpha-helical domain ABU16_2532 PF03413 Peptidase propeptide and YPEB domain ABU16_2532 PF01447 Thermolysin metallopeptidase, catalytic domain ABU16_2535 PF08281 Sigma-70, region 4 ABU16_2535 PF04542 Sigma-70 region 2 ABU16_2536 PF13490 Putative zinc-finger ABU16_2538 PF17259 Family of unknown function (DUF5325) ABU16_2540 PF14036 YlaH-like protein ABU16_2541 PF09963 Uncharacterized protein conserved in bacteria (DUF2197) ABU16_2542 PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) ABU16_2543 PF13638 PIN domain ABU16_2543 PF02562 PhoH-like protein ABU16_2545 PF04960 Glutaminase ABU16_2546 PF07408 Protein of unknown function (DUF1507) ABU16_2548 PF01098 Cell cycle protein ABU16_2549 PF00289 Biotin carboxylase, N-terminal domain ABU16_2549 PF00364 Biotin-requiring enzyme ABU16_2549 PF00682 HMGL-like ABU16_2549 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain ABU16_2549 PF02436 Conserved carboxylase domain ABU16_2549 PF02785 Biotin carboxylase C-terminal domain ABU16_2550 PF02628 Cytochrome oxidase assembly protein ABU16_2552 PF01040 UbiA prenyltransferase family ABU16_2554 PF00034 Cytochrome c ABU16_2554 PF00116 Cytochrome C oxidase subunit II, periplasmic domain ABU16_2554 PF02790 Cytochrome C oxidase subunit II, transmembrane domain ABU16_2555 PF00115 Cytochrome C and Quinol oxidase polypeptide I ABU16_2556 PF00510 Cytochrome c oxidase subunit III ABU16_2557 PF03626 Prokaryotic Cytochrome C oxidase subunit IV ABU16_2558 PF09678 Cytochrome c oxidase caa3 assembly factor (Caa3_CtaG) ABU16_2559 PF08868 YugN-like family ABU16_2560 PF00571 CBS domain ABU16_2561 PF00188 Cysteine-rich secretory protein family ABU16_2561 PF14504 CAP-associated N-terminal ABU16_2562 PF14071 Putative coat protein ABU16_2563 PF14003 YlbE-like protein ABU16_2564 PF06133 Control of competence regulator ComK, YlbF/YmcA ABU16_2565 PF09902 Uncharacterized protein conserved in bacteria (DUF2129) ABU16_2567 PF01467 Cytidylyltransferase-like ABU16_2568 PF07670 Nucleoside recognition ABU16_2569 PF01734 Patatin-like phospholipase ABU16_2570 PF05362 Lon protease (S16) C-terminal proteolytic domain ABU16_2570 PF13180 PDZ domain ABU16_2571 PF05636 HIGH Nucleotidyl Transferase ABU16_2573 PF02620 Large ribosomal RNA subunit accumulation protein YceD ABU16_2576 PF00583 Acetyltransferase (GNAT) family ABU16_2577 PF08546 Ketopantoate reductase PanE/ApbA C terminal ABU16_2577 PF02558 Ketopantoate reductase PanE/ApbA ABU16_2578 PF10079 Bacillithiol biosynthesis BshC ABU16_2579 PF02381 MraZ protein, putative antitoxin-like ABU16_2580 PF01795 MraW methylase family ABU16_2583 PF03793 PASTA domain ABU16_2583 PF03717 Penicillin-binding Protein dimerisation domain ABU16_2583 PF00905 Penicillin binding protein transpeptidase domain ABU16_2584 PF02875 Mur ligase family, glutamate ligase domain ABU16_2584 PF01225 Mur ligase family, catalytic domain ABU16_2584 PF08245 Mur ligase middle domain ABU16_2585 PF00953 Glycosyl transferase family 4 ABU16_2585 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 ABU16_2586 PF08245 Mur ligase middle domain ABU16_2586 PF02875 Mur ligase family, glutamate ligase domain ABU16_2587 PF01098 Cell cycle protein ABU16_2588 PF04101 Glycosyltransferase family 28 C-terminal domain ABU16_2588 PF03033 Glycosyltransferase family 28 N-terminal domain ABU16_2589 PF01565 FAD binding domain ABU16_2589 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain ABU16_2590 PF08478 POTRA domain, FtsQ-type ABU16_2591 PF05949 Bacterial protein of unknown function (DUF881) ABU16_2592 PF05949 Bacterial protein of unknown function (DUF881) ABU16_2593 PF06947 Protein of unknown function (DUF1290) ABU16_2594 PF02491 SHS2 domain inserted in FTSA ABU16_2595 PF12327 FtsZ family, C-terminal domain ABU16_2595 PF00091 Tubulin/FtsZ family, GTPase domain ABU16_2596 PF05922 Peptidase inhibitor I9 ABU16_2596 PF00082 Subtilase family ABU16_2597 PF03419 Sporulation factor SpoIIGA ABU16_2598 PF04542 Sigma-70 region 2 ABU16_2598 PF04545 Sigma-70, region 4 ABU16_2599 PF04542 Sigma-70 region 2 ABU16_2599 PF04539 Sigma-70 region 3 ABU16_2599 PF04545 Sigma-70, region 4 ABU16_2600 PF00005 ABC transporter ABU16_2601 PF07687 Peptidase dimerisation domain ABU16_2601 PF01546 Peptidase family M20/M25/M40 ABU16_2602 PF05239 PRC-barrel domain ABU16_2604 PF01168 Alanine racemase, N-terminal domain ABU16_2605 PF04472 Cell division protein SepF ABU16_2606 PF02325 YGGT family ABU16_2607 PF17774 Putative RNA-binding domain in YlmH ABU16_2607 PF01479 S4 domain ABU16_2608 PF05103 DivIVA protein ABU16_2610 PF08264 Anticodon-binding domain of tRNA ABU16_2610 PF00133 tRNA synthetases class I (I, L, M and V) ABU16_2611 PF01258 Prokaryotic dksA/traR C4-type zinc finger ABU16_2612 PF01252 Signal peptidase (SPase) II ABU16_2613 PF00849 RNA pseudouridylate synthase ABU16_2613 PF01479 S4 domain ABU16_2614 PF00156 Phosphoribosyl transferase domain ABU16_2615 PF00860 Permease family ABU16_2616 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain ABU16_2616 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain ABU16_2617 PF01979 Amidohydrolase family ABU16_2618 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain ABU16_2618 PF00117 Glutamine amidotransferase class-I ABU16_2619 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain ABU16_2619 PF02142 MGS-like domain ABU16_2619 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain ABU16_2620 PF00175 Oxidoreductase NAD-binding domain ABU16_2620 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B ABU16_2621 PF01180 Dihydroorotate dehydrogenase ABU16_2622 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family ABU16_2623 PF00156 Phosphoribosyl transferase domain ABU16_2624 PF01507 Phosphoadenosine phosphosulfate reductase family ABU16_2625 PF01384 Phosphate transporter family ABU16_2626 PF14306 PUA-like domain ABU16_2626 PF01747 ATP-sulfurylase ABU16_2628 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases ABU16_2629 PF01903 CbiX ABU16_2632 PF00690 Cation transporter/ATPase, N-terminus ABU16_2632 PF00689 Cation transporting ATPase, C-terminus ABU16_2633 PF03755 YicC-like family, N-terminal region ABU16_2633 PF08340 Domain of unknown function (DUF1732) ABU16_2634 PF04025 Domain of unknown function (DUF370) ABU16_2635 PF00625 Guanylate kinase ABU16_2636 PF01192 RNA polymerase Rpb6 ABU16_2637 PF04127 DNA / pantothenate metabolism flavoprotein ABU16_2637 PF02441 Flavoprotein ABU16_2638 PF18319 PriA DNA helicase Cys-rich region (CRR) domain ABU16_2638 PF18074 Primosomal protein N C-terminal domain ABU16_2638 PF00271 Helicase conserved C-terminal domain ABU16_2638 PF04851 Type III restriction enzyme, res subunit ABU16_2638 PF17764 3′ DNA-binding domain (3′BD) ABU16_2639 PF01327 Polypeptide deformylase ABU16_2640 PF02911 Formyl transferase, C-terminal domain ABU16_2640 PF00551 Formyl transferase ABU16_2641 PF01189 16S rRNA methyltransferase RsmB/F ABU16_2641 PF01029 NusB family ABU16_2642 PF04055 Radical SAM superfamily ABU16_2644 PF00069 Protein kinase domain ABU16_2644 PF03793 PASTA domain ABU16_2645 PF03193 RsgA GTPase ABU16_2645 PF16745 RsgA N-terminal domain ABU16_2646 PF00834 Ribulose-phosphate 3 epimerase family ABU16_2647 PF04263 Thiamin pyrophosphokinase, catalytic domain ABU16_2647 PF04265 Thiamin pyrophosphokinase, vitamin B1 binding domain ABU16_2648 PF00830 Ribosomal L28 family ABU16_2649 PF03780 Asp23 family, cell envelope-related function ABU16_2650 PF13684 Dihydroxyacetone kinase family ABU16_2650 PF02734 DAK2 domain ABU16_2651 PF03315 Serine dehydratase beta chain ABU16_2651 PF01842 ACT domain ABU16_2652 PF03313 Serine dehydratase alpha chain ABU16_2653 PF00270 DEAD/DEAH box helicase ABU16_2653 PF00271 Helicase conserved C-terminal domain ABU16_2653 PF17191 RecG wedge domain ABU16_2654 PF03061 Thioesterase superfamily ABU16_2655 PF02504 Fatty acid synthesis protein ABU16_2656 PF00698 Acyl transferase domain ABU16_2658 PF00550 Phosphopantetheine attachment site ABU16_2659 PF00035 Double-stranded RNA binding motif ABU16_2659 PF14622 Ribonuclease-III-like ABU16_2660 PF02463 RecF/RecN/SMC N terminal domain ABU16_2660 PF06470 SMC proteins Flexible Hinge Domain ABU16_2661 PF00448 SRP54-type protein, GTPase domain ABU16_2661 PF02881 SRP54-type protein, helical bundle domain ABU16_2662 PF02369 Bacterial Ig-like domain (group 1) ABU16_2663 PF04297 Putative helix-turn-helix protein, YlxM / p13 like ABU16_2664 PF02881 SRP54-type protein, helical bundle domain ABU16_2664 PF00448 SRP54-type protein, GTPase domain ABU16_2664 PF02978 Signal peptide binding domain ABU16_2665 PF00886 Ribosomal protein S16 ABU16_2667 PF11068 YlqD protein ABU16_2668 PF01782 RimM N-terminal domain ABU16_2668 PF05239 PRC-barrel domain ABU16_2669 PF01746 tRNA (Guanine-1)-methyltransferase ABU16_2670 PF01245 Ribosomal protein L19 ABU16_2671 PF01926 50S ribosome-binding GTPase ABU16_2672 PF01351 Ribonuclease HII ABU16_2674 PF01312 FlhB HrpN YscU SpaS Family ABU16_2675 PF00549 CoA-ligase ABU16_2675 PF08442 ATP-grasp domain ABU16_2676 PF00549 CoA-ligase ABU16_2676 PF02629 CoA binding domain ABU16_2677 PF02481 DNA recombination-mediator protein A ABU16_2678 PF01396 Topoisomerase DNA binding C4 zinc finger ABU16_2678 PF01751 Toprim domain ABU16_2678 PF01131 DNA topoisomerase ABU16_2679 PF01134 Glucose inhibited division protein A ABU16_2680 PF00589 Phage integrase family ABU16_2680 PF02899 Phage integrase, N-terminal SAM-like domain ABU16_2681 PF00227 Proteasome subunit ABU16_2682 PF07724 AAA domain (Cdc48 subfamily) ABU16_2682 PF10431 C-terminal, D2-small domain, of ClpB protein ABU16_2682 PF00004 ATPase family associated with various cellular activities (AAA) ABU16_2683 PF06018 CodY GAF-like domain ABU16_2683 PF08222 CodY helix-turn-helix domain ABU16_2684 PF00460 Flagella basal body rod protein ABU16_2685 PF00460 Flagella basal body rod protein ABU16_2685 PF06429 Flagellar basal body rod FlgEFG protein C-terminal ABU16_2686 PF02049 Flagellar hook-basal body complex protein FliE ABU16_2687 PF01514 Secretory protein of YscJ/FliF family ABU16_2687 PF08345 Flagellar M-ring protein C-terminal ABU16_2688 PF14842 FliG N-terminal domain ABU16_2688 PF14841 FliG middle domain ABU16_2688 PF01706 FliG C-terminal domain ABU16_2689 PF02108 Flagellar assembly protein FliH ABU16_2690 PF02874 ATP synthase alpha/beta family, beta-barrel domain ABU16_2690 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain ABU16_2690 PF18269 T3SS EscN ATPase C-terminal domain ABU16_2691 PF02050 Flagellar FliJ protein ABU16_2692 PF03448 MgtE intracellular N domain ABU16_2693 PF02120 Flagellar hook-length control protein FliK ABU16_2694 PF03963 Flagellar hook capping protein - N-terminal region ABU16_2695 PF00460 Flagella basal body rod protein ABU16_2695 PF06429 Flagellar basal body rod FlgEFG protein C-terminal ABU16_2696 PF06289 Flagellar and Swarming motility proteins ABU16_2697 PF03748 Flagellar basal body-associated protein FliL ABU16_2698 PF02154 Flagellar motor switch protein FliM ABU16_2698 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term ABU16_2699 PF04509 CheC-like family ABU16_2699 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term ABU16_2700 PF00072 Response regulator receiver domain ABU16_2701 PF04347 Flagellar biosynthesis protein, FliO ABU16_2702 PF00813 FliP family ABU16_2703 PF01313 Bacterial export proteins, family 3 ABU16_2704 PF01311 Bacterial export proteins, family 1 ABU16_2705 PF01312 FlhB HrpN YscU SpaS Family ABU16_2706 PF00771 FHIPEP family ABU16_2707 PF00448 SRP54-type protein, GTPase domain ABU16_2708 PF10609 NUBPL iron-transfer P-loop NTPase ABU16_2709 PF01339 CheB methylesterase ABU16_2709 PF00072 Response regulator receiver domain ABU16_2710 PF01584 CheW-like domain ABU16_2710 PF02895 Signal transducing histidine kinase, homodimeric domain ABU16_2710 PF01627 Hpt domain ABU16_2710 PF07194 P2 response regulator binding domain ABU16_2710 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABU16_2711 PF01584 CheW-like domain ABU16_2712 PF04509 CheC-like family ABU16_2713 PF03975 CheD chemotactic sensory transduction ABU16_2714 PF04539 Sigma-70 region 3 ABU16_2714 PF04542 Sigma-70 region 2 ABU16_2714 PF04545 Sigma-70, region 4 ABU16_2716 PF00318 Ribosomal protein S2 ABU16_2717 PF00889 Elongation factor TS ABU16_2718 PF00696 Amino acid kinase family ABU16_2719 PF01765 Ribosome recycling factor ABU16_2720 PF01255 Putative undecaprenyl diphosphate synthase ABU16_2722 PF13288 DXP reductoisomerase C-terminal domain ABU16_2722 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain ABU16_2722 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase ABU16_2723 PF02163 Peptidase family M50 ABU16_2723 PF17820 PDZ domain ABU16_2724 PF03129 Anticodon binding domain ABU16_2724 PF04073 Aminoacyl-tRNA editing domain ABU16_2724 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) ABU16_2725 PF00929 Exonuclease ABU16_2725 PF02811 PHP domain ABU16_2725 PF14579 Helix-hairpin-helix motif ABU16_2725 PF17657 Bacterial DNA polymerase III alpha subunit finger domain ABU16_2725 PF07733 Bacterial DNA polymerase III alpha NTPase domain ABU16_2725 PF14480 DNA polymerase III polC-type N-terminus I ABU16_2725 PF11490 DNA polymerase III polC-type N-terminus II ABU16_2726 PF02576 RimP N-terminal domain ABU16_2726 PF17384 RimP C-terminal SH3 domain ABU16_2727 PF13184 NusA-like KH domain ABU16_2727 PF08529 NusA N-terminal domain ABU16_2727 PF00575 S1 RNA binding domain ABU16_2728 PF04296 Protein of unknown function (DUF448) ABU16_2729 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family ABU16_2730 PF00009 Elongation factor Tu GTP binding domain ABU16_2730 PF04760 Translation initiation factor IF-2, N-terminal region ABU16_2730 PF11987 Translation-initiation factor 2 ABU16_2731 PF04456 Protein of unknown function (DUF503) ABU16_2732 PF02033 Ribosome-binding factor A ABU16_2733 PF01509 TruB family pseudouridylate synthase (N terminal domain) ABU16_2733 PF16198 tRNA pseudouridylate synthase B C-terminal domain ABU16_2734 PF06574 FAD synthetase ABU16_2734 PF01687 Riboflavin kinase ABU16_2735 PF00575 S1 RNA binding domain ABU16_2735 PF00013 KH domain ABU16_2735 PF03725 3' exoribonuclease family, domain 2 ABU16_2735 PF01138 3' exoribonuclease family, domain 1 ABU16_2735 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain ABU16_2736 PF01522 Polysaccharide deacetylase ABU16_2737 PF05193 Peptidase M16 inactive domain ABU16_2737 PF00675 Insulinase (Peptidase family M16) ABU16_2738 PF05239 PRC-barrel domain ABU16_2740 PF01262 Alanine dehydrogenase/PNT, C-terminal domain ABU16_2740 PF16924 Dipicolinate synthase subunit A N-terminal domain ABU16_2741 PF02441 Flavoprotein ABU16_2742 PF01118 Semialdehyde dehydrogenase, NAD binding domain ABU16_2742 PF02774 Semialdehyde dehydrogenase, dimerisation domain ABU16_2743 PF00696 Amino acid kinase family ABU16_2743 PF13840 ACT domain ABU16_2744 PF00701 Dihydrodipicolinate synthetase family ABU16_2745 PF00753 Metallo-beta-lactamase superfamily ABU16_2745 PF17770 Ribonuclease J C-terminal domain ABU16_2745 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain ABU16_2746 PF00574 Clp protease ABU16_2747 PF14035 YlzJ-like protein ABU16_2748 PF17854 FtsK alpha domain ABU16_2748 PF09397 Ftsk gamma domain ABU16_2748 PF01580 FtsK/SpoIIIE family ABU16_2749 PF00392 Bacterial regulatory proteins, gntR family ABU16_2749 PF07702 UTRA domain ABU16_2751 PF07690 Major Facilitator Superfamily ABU16_2752 PF05193 Peptidase M16 inactive domain ABU16_2753 PF05193 Peptidase M16 inactive domain ABU16_2753 PF00675 Insulinase (Peptidase family M16) ABU16_2755 PF11588 Protein of unknown function (DUF3243) ABU16_2756 PF11868 Protein of unknown function (DUF3388) ABU16_2757 PF13464 Domain of unknown function (DUF4115) ABU16_2758 PF01066 CDP-alcohol phosphatidyltransferase ABU16_2759 PF00994 Probable molybdopterin binding domain ABU16_2759 PF18146 Damage-inducible protein CinA KH domain ABU16_2759 PF02464 Competence-damaged protein ABU16_2760 PF00154 recA bacterial DNA recombination protein ABU16_2761 PF00144 Beta-lactamase ABU16_2762 PF01966 HD domain ABU16_2762 PF00013 KH domain ABU16_2762 PF12072 Domain of unknown function (DUF3552) ABU16_2763 PF13277 YmdB-like protein ABU16_2764 PF04232 Stage V sporulation protein S (SpoVS) ABU16_2765 PF00107 Zinc-binding dehydrogenase ABU16_2765 PF08240 Alcohol dehydrogenase GroES-like domain ABU16_2766 PF00155 Aminotransferase class I and II ABU16_2767 PF00919 Uncharacterized protein family UPF0004 ABU16_2767 PF01938 TRAM domain ABU16_2767 PF04055 Radical SAM superfamily ABU16_2768 PF06133 Control of competence regulator ComK, YlbF/YmcA ABU16_2769 PF10628 Outer spore coat protein E (CotE) ABU16_2770 PF00488 MutS domain V ABU16_2770 PF05190 MutS family domain IV ABU16_2770 PF05192 MutS domain III ABU16_2770 PF05188 MutS domain II ABU16_2770 PF01624 MutS domain I ABU16_2771 PF01119 DNA mismatch repair protein, C-terminal domain ABU16_2771 PF08676 MutL C terminal dimerisation domain ABU16_2773 PF14184 Regulatory protein YrvL ABU16_2775 PF00440 Bacterial regulatory proteins, tetR family ABU16_2775 PF13977 BetI-type transcriptional repressor, C-terminal ABU16_2776 PF00753 Metallo-beta-lactamase superfamily ABU16_2777 PF00698 Acyl transferase domain ABU16_2779 PF00698 Acyl transferase domain ABU16_2780 PF00698 Acyl transferase domain ABU16_2780 PF03060 Nitronate monooxygenase ABU16_2781 PF00550 Phosphopantetheine attachment site ABU16_2782 PF00109 Beta-ketoacyl synthase, N-terminal domain ABU16_2782 PF02801 Beta-ketoacyl synthase, C-terminal domain ABU16_2783 PF01154 Hydroxymethylglutaryl-coenzyme A synthase N terminal ABU16_2783 PF08540 Hydroxymethylglutaryl-coenzyme A synthase C terminal ABU16_2784 PF00378 Enoyl-CoA hydratase/isomerase ABU16_2785 PF00378 Enoyl-CoA hydratase/isomerase ABU16_2786 PF16197 Ketoacyl-synthetase C-terminal extension ABU16_2786 PF13193 AMP-binding enzyme C-terminal domain ABU16_2786 PF00668 Condensation domain ABU16_2786 PF08659 KR domain ABU16_2786 PF00550 Phosphopantetheine attachment site ABU16_2786 PF14765 Polyketide synthase dehydratase ABU16_2786 PF00501 AMP-binding enzyme ABU16_2786 PF00109 Beta-ketoacyl synthase, N-terminal domain ABU16_2786 PF02801 Beta-ketoacyl synthase, C-terminal domain ABU16_2787 PF16197 Ketoacyl-synthetase C-terminal extension ABU16_2787 PF00109 Beta-ketoacyl synthase, N-terminal domain ABU16_2787 PF02801 Beta-ketoacyl synthase, C-terminal domain ABU16_2787 PF08659 KR domain ABU16_2787 PF00550 Phosphopantetheine attachment site ABU16_2787 PF14765 Polyketide synthase dehydratase ABU16_2788 PF00109 Beta-ketoacyl synthase, N-terminal domain ABU16_2788 PF02801 Beta-ketoacyl synthase, C-terminal domain ABU16_2788 PF14765 Polyketide synthase dehydratase ABU16_2788 PF00550 Phosphopantetheine attachment site ABU16_2788 PF08242 Methyltransferase domain ABU16_2788 PF08659 KR domain ABU16_2788 PF16197 Ketoacyl-synthetase C-terminal extension ABU16_2789 PF08659 KR domain ABU16_2789 PF14765 Polyketide synthase dehydratase ABU16_2789 PF00550 Phosphopantetheine attachment site ABU16_2789 PF02801 Beta-ketoacyl synthase, C-terminal domain ABU16_2789 PF16197 Ketoacyl-synthetase C-terminal extension ABU16_2789 PF00668 Condensation domain ABU16_2789 PF13193 AMP-binding enzyme C-terminal domain ABU16_2789 PF00501 AMP-binding enzyme ABU16_2789 PF00109 Beta-ketoacyl synthase, N-terminal domain ABU16_2790 PF00550 Phosphopantetheine attachment site ABU16_2790 PF16197 Ketoacyl-synthetase C-terminal extension ABU16_2790 PF00109 Beta-ketoacyl synthase, N-terminal domain ABU16_2790 PF02801 Beta-ketoacyl synthase, C-terminal domain ABU16_2790 PF08242 Methyltransferase domain ABU16_2790 PF00975 Thioesterase domain ABU16_2790 PF14765 Polyketide synthase dehydratase ABU16_2791 PF00067 Cytochrome P450 ABU16_2794 PF00082 Subtilase family ABU16_2796 PF05908 Poly-gamma-glutamate hydrolase ABU16_2797 PF02566 OsmC-like protein ABU16_2798 PF00893 Small Multidrug Resistance protein ABU16_2799 PF00893 Small Multidrug Resistance protein ABU16_2801 PF12788 YmaF family ABU16_2803 PF17209 Hfq protein ABU16_2804 PF14157 YmzC-like protein ABU16_2806 PF07972 NrdI Flavodoxin like ABU16_2807 PF02867 Ribonucleotide reductase, barrel domain ABU16_2807 PF00317 Ribonucleotide reductase, all-alpha domain ABU16_2807 PF08343 Ribonucleotide reductase N-terminal ABU16_2808 PF00268 Ribonucleotide reductase, small chain ABU16_2810 PF01520 N-acetylmuramoyl-L-alanine amidase ABU16_2810 PF05036 Sporulation related domain ABU16_2812 PF17866 AAA lid domain ABU16_2812 PF00004 ATPase family associated with various cellular activities (AAA) ABU16_2813 PF16360 GTP-binding GTPase Middle Region ABU16_2813 PF01926 50S ribosome-binding GTPase ABU16_2813 PF13167 GTP-binding GTPase N-terminal ABU16_2814 PF06838 Methionine gamma-lyase ABU16_2815 PF13411 MerR HTH family regulatory protein ABU16_2816 PF03951 Glutamine synthetase, beta-Grasp domain ABU16_2816 PF00120 Glutamine synthetase, catalytic domain ABU16_2821 PF13302 Acetyltransferase (GNAT) domain ABU16_2822 PF02586 SOS response associated peptidase (SRAP) ABU16_2823 PF13021 Domain of unknown function (DUF3885) ABU16_2829 PF04616 Glycosyl hydrolases family 43 ABU16_2829 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain ABU16_2830 PF00480 ROK family ABU16_2831 PF01261 Xylose isomerase-like TIM barrel ABU16_2832 PF02782 FGGY family of carbohydrate kinases, C-terminal domain ABU16_2832 PF00370 FGGY family of carbohydrate kinases, N-terminal domain ABU16_2833 PF00457 Glycosyl hydrolases family 11 ABU16_2834 PF00565 Staphylococcal nuclease homologue ABU16_2835 PF00083 Sugar (and other) transporter ABU16_2836 PF00842 Alanine racemase, C-terminal domain ABU16_2836 PF01168 Alanine racemase, N-terminal domain ABU16_2837 PF10903 Protein of unknown function (DUF2691) ABU16_2838 PF00692 dUTPase ABU16_2842 PF00303 Thymidylate synthase ABU16_2843 PF15493 Domain of unknown function, YrpD ABU16_2844 PF14037 YoqO-like protein ABU16_2846 PF02416 mttA/Hcf106 family ABU16_2849 PF08327 Activator of Hsp90 ATPase homolog 1-like protein ABU16_2851 PF03323 Bacillus/Clostridium GerA spore germination protein ABU16_2852 PF03845 Spore germination protein ABU16_2853 PF05504 Spore germination B3/ GerAC like, C-terminal ABU16_2855 PF13761 Domain of unknown function (DUF4166) ABU16_2856 PF14158 YndJ-like protein ABU16_2858 PF05908 Poly-gamma-glutamate hydrolase ABU16_2859 PF10710 Protein of unknown function (DUF2512) ABU16_2860 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily ABU16_2862 PF01726 LexA DNA binding domain ABU16_2862 PF00717 Peptidase S24-like ABU16_2863 PF01476 LysM domain ABU16_2864 PF00239 Resolvase, N terminal domain ABU16_2865 PF05979 Bacterial protein of unknown function (DUF896) ABU16_2866 PF00456 Transketolase, thiamine diphosphate binding domain ABU16_2866 PF02779 Transketolase, pyrimidine binding domain ABU16_2866 PF02780 Transketolase, C-terminal domain ABU16_2867 PF10747 Sporulation inhibitor of replication protein SirA ABU16_2868 PF03672 Uncharacterised protein family (UPF0154) ABU16_2869 PF09388 Spo0E like sporulation regulatory protein ABU16_2870 PF02683 Cytochrome C biogenesis protein transmembrane region ABU16_2871 PF00072 Response regulator receiver domain ABU16_2872 PF07301 Protein of unknown function (DUF1453) ABU16_2873 PF11084 Protein of unknown function (DUF2621) ABU16_2875 PF08179 Small acid-soluble spore protein P family ABU16_2877 PF00694 Aconitase C-terminal domain ABU16_2877 PF00330 Aconitase family (aconitate hydratase) ABU16_2878 PF00578 AhpC/TSA family ABU16_2879 PF13040 Fur-regulated basic protein B ABU16_2880 PF08177 Small acid-soluble spore protein N family ABU16_2882 PF03061 Thioesterase superfamily ABU16_2884 PF01521 Iron-sulphur cluster biosynthesis ABU16_2885 PF02660 Glycerol-3-phosphate acyltransferase ABU16_2886 PF13380 CoA binding domain ABU16_2887 PF01751 Toprim domain ABU16_2887 PF00986 DNA gyrase B subunit, carboxyl terminus ABU16_2887 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABU16_2887 PF00204 DNA gyrase B ABU16_2888 PF00521 DNA gyrase/topoisomerase IV, subunit A ABU16_2888 PF03989 DNA gyrase C-terminal domain, beta-propeller ABU16_2892 PF01235 Sodium:alanine symporter family ABU16_2893 PF00150 Cellulase (glycosyl hydrolase family 5) ABU16_2893 PF00942 Cellulose binding domain ABU16_2894 PF17452 Uncharacterized YnfE-like ABU16_2895 PF17189 Glycosyl hydrolase family 30 beta sandwich domain ABU16_2896 PF04616 Glycosyl hydrolases family 43 ABU16_2896 PF03422 Carbohydrate binding module (family 6) ABU16_2897 PF04138 GtrA-like protein ABU16_2898 PF00483 Nucleotidyl transferase ABU16_2899 PF09335 SNARE associated Golgi protein ABU16_2901 PF01039 Carboxyl transferase domain ABU16_2902 PF00378 Enoyl-CoA hydratase/isomerase ABU16_2903 PF00682 HMGL-like ABU16_2904 PF00364 Biotin-requiring enzyme ABU16_2905 PF02785 Biotin carboxylase C-terminal domain ABU16_2905 PF00289 Biotin carboxylase, N-terminal domain ABU16_2905 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain ABU16_2906 PF13193 AMP-binding enzyme C-terminal domain ABU16_2906 PF00501 AMP-binding enzyme ABU16_2907 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ABU16_2907 PF02770 Acyl-CoA dehydrogenase, middle domain ABU16_2907 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ABU16_2908 PF17329 Family of unknown function (DUF5367) ABU16_2909 PF02638 Glycosyl hydrolase-like 10 ABU16_2910 PF07098 Protein of unknown function (DUF1360) ABU16_2911 PF00668 Condensation domain ABU16_2911 PF00501 AMP-binding enzyme ABU16_2911 PF13193 AMP-binding enzyme C-terminal domain ABU16_2911 PF00975 Thioesterase domain ABU16_2911 PF00550 Phosphopantetheine attachment site ABU16_2912 PF00550 Phosphopantetheine attachment site ABU16_2912 PF00668 Condensation domain ABU16_2912 PF13193 AMP-binding enzyme C-terminal domain ABU16_2912 PF00501 AMP-binding enzyme ABU16_2913 PF13193 AMP-binding enzyme C-terminal domain ABU16_2913 PF00668 Condensation domain ABU16_2913 PF00501 AMP-binding enzyme ABU16_2913 PF00550 Phosphopantetheine attachment site ABU16_2914 PF00550 Phosphopantetheine attachment site ABU16_2914 PF00668 Condensation domain ABU16_2914 PF13193 AMP-binding enzyme C-terminal domain ABU16_2914 PF00501 AMP-binding enzyme ABU16_2915 PF13193 AMP-binding enzyme C-terminal domain ABU16_2915 PF00668 Condensation domain ABU16_2915 PF00501 AMP-binding enzyme ABU16_2915 PF00550 Phosphopantetheine attachment site ABU16_2916 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family ABU16_2917 PF01263 Aldose 1-epimerase ABU16_2918 PF01554 MatE ABU16_2919 PF16800 IseA DL-endopeptidase inhibitor ABU16_2920 PF00589 Phage integrase family ABU16_2921 PF12728 Helix-turn-helix domain ABU16_2923 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABU16_2923 PF03466 LysR substrate binding domain ABU16_2924 PF00107 Zinc-binding dehydrogenase ABU16_2924 PF08240 Alcohol dehydrogenase GroES-like domain ABU16_2925 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster ABU16_2925 PF07992 Pyridine nucleotide-disulphide oxidoreductase ABU16_2926 PF04898 Glutamate synthase central domain ABU16_2926 PF00310 Glutamine amidotransferases class-II ABU16_2926 PF01493 GXGXG motif ABU16_2926 PF01645 Conserved region in glutamate synthase ABU16_2927 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABU16_2927 PF03466 LysR substrate binding domain ABU16_2928 PF01472 PUA domain ABU16_2928 PF00696 Amino acid kinase family ABU16_2929 PF14748 Pyrroline-5-carboxylate reductase dimerisation ABU16_2929 PF03807 NADP oxidoreductase coenzyme F420-dependent ABU16_2930 PF02334 Replication terminator protein ABU16_2931 PF00106 short chain dehydrogenase ABU16_2932 PF06103 Bacterial protein of unknown function (DUF948) ABU16_2934 PF13302 Acetyltransferase (GNAT) domain ABU16_2935 PF07690 Major Facilitator Superfamily ABU16_2936 PF00370 FGGY family of carbohydrate kinases, N-terminal domain ABU16_2936 PF02782 FGGY family of carbohydrate kinases, C-terminal domain ABU16_2937 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain ABU16_2937 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain ABU16_2938 PF01568 Molydopterin dinucleotide binding domain ABU16_2938 PF00384 Molybdopterin oxidoreductase ABU16_2938 PF04879 Molybdopterin oxidoreductase Fe4S4 domain ABU16_2940 PF17094 Uncharacterised protein family (UPF0715) ABU16_2942 PF13217 Protein of unknown function (DUF4025) ABU16_2943 PF05227 CHASE3 domain ABU16_2943 PF00672 HAMP domain ABU16_2943 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ABU16_2945 PF11794 4-hydroxyphenylacetate 3-hydroxylase N terminal ABU16_2945 PF03241 4-hydroxyphenylacetate 3-hydroxylase C terminal ABU16_2946 PF03330 Lytic transglycolase ABU16_2947 PF06912 Protein of unknown function (DUF1275) ABU16_2948 PF00544 Pectate lyase ABU16_2949 PF02586 SOS response associated peptidase (SRAP) ABU16_2951 PF00190 Cupin ABU16_2952 PF16302 Domain of unknown function (DUF4944) ABU16_2953 PF14268 YoaP-like ABU16_2953 PF00583 Acetyltransferase (GNAT) family ABU16_2956 PF04294 VanW like protein ABU16_2957 PF11188 Protein of unknown function (DUF2975) ABU16_2958 PF13443 Cro/C1-type HTH DNA-binding domain ABU16_2959 PF05675 Protein of unknown function (DUF817) ABU16_2960 PF03466 LysR substrate binding domain ABU16_2960 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABU16_2961 PF00892 EamA-like transporter family ABU16_2963 PF01965 DJ-1/PfpI family ABU16_2965 PF11518 Protein of unknown function (DUF3221) ABU16_2967 PF00391 PEP-utilising enzyme, mobile domain ABU16_2967 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain ABU16_2968 PF00457 Glycosyl hydrolases family 11 ABU16_2969 PF05154 TM2 domain ABU16_2970 PF01381 Helix-turn-helix ABU16_2973 PF02586 SOS response associated peptidase (SRAP) ABU16_2979 PF18801 response regulator aspartate phosphatase H, N terminal ABU16_2981 PF11798 IMS family HHH motif ABU16_2981 PF11799 impB/mucB/samB family C-terminal domain ABU16_2982 PF00817 impB/mucB/samB family ABU16_2983 PF08863 YolD-like protein ABU16_2985 PF07693 KAP family P-loop domain ABU16_2989 PF14411 A nuclease of the HNH/ENDO VII superfamily with conserved LHH ABU16_2989 PF04740 LXG domain of WXG superfamily ABU16_2990 PF09346 SMI1 / KNR4 family (SUKH-1) ABU16_2991 PF01593 Flavin containing amine oxidoreductase ABU16_2992 PF11962 Peptidase_G2, IMC autoproteolytic cleavage domain ABU16_2992 PF12708 Pectate lyase superfamily protein ABU16_2993 PF01588 Putative tRNA binding domain ABU16_2994 PF12833 Helix-turn-helix domain ABU16_2994 PF07883 Cupin domain ABU16_2995 PF00583 Acetyltransferase (GNAT) family ABU16_2996 PF00440 Bacterial regulatory proteins, tetR family ABU16_2996 PF13305 Tetracyclin repressor-like, C-terminal domain ABU16_2997 PF00753 Metallo-beta-lactamase superfamily ABU16_2998 PF06445 GyrI-like small molecule binding domain ABU16_2999 PF08279 HTH domain ABU16_2999 PF13280 WYL domain ABU16_3001 PF01022 Bacterial regulatory protein, arsR family ABU16_3003 PF04238 Protein of unknown function (DUF420) ABU16_3004 PF18846 Bacterial archaeo-eukaryotic release factor family 5 ABU16_3005 PF18846 Bacterial archaeo-eukaryotic release factor family 5 ABU16_3007 PF02016 LD-carboxypeptidase N-terminal domain ABU16_3007 PF17676 LD-carboxypeptidase C-terminal domain ABU16_3008 PF00487 Fatty acid desaturase ABU16_3009 PF07730 Histidine kinase ABU16_3010 PF00196 Bacterial regulatory proteins, luxR family ABU16_3010 PF00072 Response regulator receiver domain ABU16_3011 PF06725 3D domain ABU16_3011 PF01476 LysM domain ABU16_3012 PF09382 RQC domain ABU16_3012 PF16124 RecQ zinc-binding ABU16_3012 PF00570 HRDC domain ABU16_3012 PF00271 Helicase conserved C-terminal domain ABU16_3012 PF00270 DEAD/DEAH box helicase ABU16_3015 PF02525 Flavodoxin-like fold ABU16_3016 PF01258 Prokaryotic dksA/traR C4-type zinc finger ABU16_3019 PF00011 Hsp20/alpha crystallin family ABU16_3022 PF08000 Bacterial PH domain ABU16_3025 PF00171 Aldehyde dehydrogenase family ABU16_3026 PF13249 Squalene-hopene cyclase N-terminal domain ABU16_3026 PF13243 Squalene-hopene cyclase C-terminal domain ABU16_3027 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain ABU16_3027 PF02777 Iron/manganese superoxide dismutases, C-terminal domain ABU16_3028 PF00209 Sodium:neurotransmitter symporter family ABU16_3029 PF01758 Sodium Bile acid symporter family ABU16_3030 PF02817 e3 binding domain ABU16_3030 PF00364 Biotin-requiring enzyme ABU16_3030 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) ABU16_3031 PF16870 2-oxoglutarate dehydrogenase C-terminal ABU16_3031 PF00676 Dehydrogenase E1 component ABU16_3031 PF02779 Transketolase, pyrimidine binding domain ABU16_3032 PF00092 von Willebrand factor type A domain ABU16_3033 PF07728 AAA domain (dynein-related subfamily) ABU16_3034 PF13627 Prokaryotic lipoprotein-attachment site ABU16_3034 PF00080 Copper/zinc superoxide dismutase (SODC) ABU16_3035 PF01476 LysM domain ABU16_3035 PF00877 NlpC/P60 family ABU16_3036 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase ABU16_3037 PF02457 DisA bacterial checkpoint controller nucleotide-binding ABU16_3037 PF10372 Bacterial membrane-spanning protein N-terminus ABU16_3038 PF01554 MatE ABU16_3039 PF01740 STAS domain ABU16_3040 PF02585 GlcNAc-PI de-N-acetylase ABU16_3041 PF08830 Protein of unknown function (DUF1806) ABU16_3043 PF00892 EamA-like transporter family ABU16_3046 PF02447 GntP family permease ABU16_3047 PF14552 Tautomerase enzyme ABU16_3049 PF01638 HxlR-like helix-turn-helix ABU16_3050 PF00881 Nitroreductase family ABU16_3051 PF01738 Dienelactone hydrolase family ABU16_3052 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily ABU16_3053 PF11755 Protein of unknown function (DUF3311) ABU16_3054 PF00474 Sodium:solute symporter family ABU16_3055 PF01471 Putative peptidoglycan binding domain ABU16_3055 PF17820 PDZ domain ABU16_3055 PF03572 Peptidase family S41 ABU16_3056 PF08241 Methyltransferase domain ABU16_3058 PF02557 D-alanyl-D-alanine carboxypeptidase ABU16_3059 PF01048 Phosphorylase superfamily ABU16_3062 PF14191 YodL-like ABU16_3063 PF01569 PAP2 superfamily ABU16_3064 PF14162 YozD-like protein ABU16_3067 PF06855 YozE SAM-like fold ABU16_3068 PF14122 YokU-like protein, putative antitoxin ABU16_3069 PF12544 Lysine-2,3-aminomutase ABU16_3070 PF00583 Acetyltransferase (GNAT) family ABU16_3071 PF01546 Peptidase family M20/M25/M40 ABU16_3071 PF07687 Peptidase dimerisation domain ABU16_3072 PF01144 Coenzyme A transferase ABU16_3073 PF01144 Coenzyme A transferase ABU16_3074 PF00202 Aminotransferase class-III ABU16_3077 PF00583 Acetyltransferase (GNAT) family ABU16_3078 PF00535 Glycosyl transferase family 2 ABU16_3081 PF12996 DUF based on E. rectale Gene description (DUF3880) ABU16_3082 PF02333 Phytase ABU16_3083 PF02719 Polysaccharide biosynthesis protein ABU16_3084 PF01641 SelR domain ABU16_3085 PF01625 Peptide methionine sulfoxide reductase ABU16_3086 PF01047 MarR family ABU16_3087 PF01554 MatE ABU16_3088 PF17431 Uncharacterized YmpT-like ABU16_3089 PF09911 Uncharacterized protein conserved in bacteria (DUF2140) ABU16_3090 PF13472 GDSL-like Lipase/Acylhydrolase family ABU16_3091 PF02630 SCO1/SenC ABU16_3092 PF10751 Protein of unknown function (DUF2535) ABU16_3093 PF00291 Pyridoxal-phosphate dependent enzyme ABU16_3093 PF00585 C-terminal regulatory domain of Threonine dehydratase ABU16_3094 PF08461 Ribonuclease R winged-helix domain ABU16_3094 PF00158 Sigma-54 interaction domain ABU16_3095 PF03006 Haemolysin-III related ABU16_3097 PF00186 Dihydrofolate reductase ABU16_3098 PF00303 Thymidylate synthase ABU16_3099 PF04608 Phosphatidylglycerophosphatase A ABU16_3100 PF14005 YpjP-like protein ABU16_3101 PF04445 Putative SAM-dependent methyltransferase ABU16_3102 PF06491 Disulphide isomerase ABU16_3103 PF00920 Dehydratase family ABU16_3104 PF13769 Virulence factor ABU16_3104 PF08712 Scaffold protein Nfu/NifU N terminal ABU16_3105 PF01966 HD domain ABU16_3106 PF00255 Glutathione peroxidase ABU16_3107 PF04204 Homoserine O-succinyltransferase ABU16_3108 PF00534 Glycosyl transferases group 1 ABU16_3108 PF06925 Monogalactosyldiacylglycerol (MGDG) synthase ABU16_3109 PF00313 'Cold-shock' DNA-binding domain ABU16_3111 PF10819 Protein of unknown function (DUF2564) ABU16_3112 PF10782 Zinc-finger ABU16_3113 PF13456 Reverse transcriptase-like ABU16_3114 PF02592 Putative vitamin uptake transporter ABU16_3115 PF13456 Reverse transcriptase-like ABU16_3117 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain ABU16_3117 PF01367 5'-3' exonuclease, C-terminal SAM fold ABU16_3119 PF10752 Protein of unknown function (DUF2533) ABU16_3121 PF00350 Dynamin family ABU16_3122 PF04140 Isoprenylcysteine carboxyl methyltransferase (ICMT) family ABU16_3123 PF00195 Chalcone and stilbene synthases, N-terminal domain ABU16_3123 PF02797 Chalcone and stilbene synthases, C-terminal domain ABU16_3124 PF00860 Permease family ABU16_3125 PF00156 Phosphoribosyl transferase domain ABU16_3126 PF02074 Carboxypeptidase Taq (M32) metallopeptidase ABU16_3127 PF03812 2-keto-3-deoxygluconate permease ABU16_3128 PF01081 KDPG and KHG aldolase ABU16_3129 PF00294 pfkB family carbohydrate kinase ABU16_3130 PF00356 Bacterial regulatory proteins, lacI family ABU16_3131 PF04962 KduI/IolB family ABU16_3133 PF13307 Helicase C-terminal domain ABU16_3135 PF01170 Putative RNA methylase family UPF0020 ABU16_3135 PF02926 THUMP domain ABU16_3136 PF05103 DivIVA protein ABU16_3137 PF06908 YspA SLOG family ABU16_3139 PF13482 RNase_H superfamily ABU16_3140 PF00270 DEAD/DEAH box helicase ABU16_3140 PF00271 Helicase conserved C-terminal domain ABU16_3140 PF09369 Domain of unknown function (DUF1998) ABU16_3141 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 ABU16_3143 PF14179 YppG-like protein ABU16_3144 PF14178 YppF-like protein ABU16_3145 PF08807 Bacterial domain of unknown function (DUF1798) ABU16_3146 PF17522 Family of unknown function (DUF5446) ABU16_3148 PF10720 Protein of unknown function (DUF2515) ABU16_3149 PF03838 Recombination protein U ABU16_3150 PF00912 Transglycosylase ABU16_3150 PF00905 Penicillin binding protein transpeptidase domain ABU16_3152 PF00730 HhH-GPD superfamily base excision DNA repair protein ABU16_3152 PF00633 Helix-hairpin-helix motif ABU16_3152 PF10576 Iron-sulfur binding domain of endonuclease III ABU16_3153 PF07261 Replication initiation and membrane attachment ABU16_3154 PF00152 tRNA synthetases class II (D, K and N) ABU16_3154 PF01336 OB-fold nucleic acid binding domain ABU16_3155 PF00155 Aminotransferase class I and II ABU16_3156 PF03413 Peptidase propeptide and YPEB domain ABU16_3156 PF17881 Domain of unknown function (DUF5590) ABU16_3157 PF14084 Protein of unknown function (DUF4264) ABU16_3158 PF00929 Exonuclease ABU16_3158 PF13307 Helicase C-terminal domain ABU16_3158 PF04851 Type III restriction enzyme, res subunit ABU16_3159 PF02261 Aspartate decarboxylase ABU16_3160 PF02569 Pantoate-beta-alanine ligase ABU16_3161 PF02548 Ketopantoate hydroxymethyltransferase ABU16_3162 PF03099 Biotin/lipoate A/B protein ligase family ABU16_3162 PF08279 HTH domain ABU16_3162 PF02237 Biotin protein ligase C terminal domain ABU16_3163 PF12627 Probable RNA and SrmB- binding site of polymerase A ABU16_3163 PF01743 Poly A polymerase head domain ABU16_3163 PF13735 tRNA nucleotidyltransferase domain 2 putative ABU16_3164 PF13439 Glycosyltransferase Family 4 ABU16_3164 PF00534 Glycosyl transferases group 1 ABU16_3165 PF02585 GlcNAc-PI de-N-acetylase ABU16_3166 PF02142 MGS-like domain ABU16_3167 PF01113 Dihydrodipicolinate reductase, N-terminus ABU16_3167 PF05173 Dihydrodipicolinate reductase, C-terminus ABU16_3168 PF03819 MazG nucleotide pyrophosphohydrolase domain ABU16_3169 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 ABU16_3169 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) ABU16_3170 PF09577 Sporulation protein YpjB (SpoYpjB) ABU16_3171 PF07187 Protein of unknown function (DUF1405) ABU16_3172 PF13442 Cytochrome C oxidase, cbb3-type, subunit III ABU16_3172 PF00032 Cytochrome b(C-terminal)/b6/petD ABU16_3173 PF00033 Cytochrome b/b6/petB ABU16_3174 PF00355 Rieske [2Fe-2S] domain ABU16_3175 PF10673 Protein of unknown function (DUF2487) ABU16_3176 PF08864 UPF0302 domain ABU16_3176 PF08858 IDEAL domain ABU16_3179 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) ABU16_3180 PF01842 ACT domain ABU16_3180 PF02153 Prephenate dehydrogenase ABU16_3181 PF00155 Aminotransferase class I and II ABU16_3182 PF00290 Tryptophan synthase alpha chain ABU16_3183 PF00291 Pyridoxal-phosphate dependent enzyme ABU16_3184 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase ABU16_3185 PF00218 Indole-3-glycerol phosphate synthase ABU16_3186 PF02885 Glycosyl transferase family, helical bundle domain ABU16_3186 PF00591 Glycosyl transferase family, a/b domain ABU16_3187 PF02885 Glycosyl transferase family, helical bundle domain ABU16_3187 PF00591 Glycosyl transferase family, a/b domain ABU16_3188 PF00425 chorismate binding enzyme ABU16_3188 PF04715 Anthranilate synthase component I, N terminal region ABU16_3189 PF07736 Chorismate mutase type I ABU16_3190 PF01761 3-dehydroquinate synthase ABU16_3191 PF01264 Chorismate synthase ABU16_3192 PF01739 CheR methyltransferase, SAM binding domain ABU16_3192 PF03705 CheR methyltransferase, all-alpha domain ABU16_3194 PF00334 Nucleoside diphosphate kinase ABU16_3195 PF00348 Polyprenyl synthetase ABU16_3196 PF01209 ubiE/COQ5 methyltransferase family ABU16_3197 PF07307 Heptaprenyl diphosphate synthase (HEPPP synthase) subunit 1 ABU16_3198 PF02081 Tryptophan RNA-binding attenuator protein ABU16_3199 PF01227 GTP cyclohydrolase I ABU16_3200 PF00216 Bacterial DNA-binding protein ABU16_3201 PF09547 Stage IV sporulation protein A (spore_IV_A) ABU16_3203 PF10966 Protein of unknown function (DUF2768) ABU16_3204 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus ABU16_3204 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus ABU16_3205 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal ABU16_3205 PF01926 50S ribosome-binding GTPase ABU16_3207 PF14045 YIEGIA protein ABU16_3209 PF14140 YpzI-like protein ABU16_3210 PF01070 FMN-dependent dehydrogenase ABU16_3211 PF00575 S1 RNA binding domain ABU16_3212 PF02224 Cytidylate kinase ABU16_3213 PF17313 Family of unknown function (DUF5359) ABU16_3214 PF07238 PilZ domain ABU16_3214 PF12945 Flagellar protein YcgR ABU16_3215 PF03413 Peptidase propeptide and YPEB domain ABU16_3215 PF14620 YpeB sporulation ABU16_3216 PF07486 Cell Wall Hydrolase ABU16_3216 PF01471 Putative peptidoglycan binding domain ABU16_3217 PF13367 PrsW family intramembrane metalloprotease ABU16_3219 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase ABU16_3219 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain ABU16_3221 PF05389 Negative regulator of genetic competence (MecA) ABU16_3222 PF00149 Calcineurin-like phosphoesterase ABU16_3223 PF10864 Protein of unknown function (DUF2663) ABU16_3224 PF01476 LysM domain ABU16_3225 PF02517 CPBP intramembrane metalloprotease ABU16_3226 PF00271 Helicase conserved C-terminal domain ABU16_3226 PF00270 DEAD/DEAH box helicase ABU16_3227 PF14493 Helix-turn-helix domain ABU16_3229 PF12822 ECF transporter, substrate-specific component ABU16_3231 PF01842 ACT domain ABU16_3231 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain ABU16_3231 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain ABU16_3232 PF01487 Type I 3-dehydroquinase ABU16_3234 PF04542 Sigma-70 region 2 ABU16_3234 PF08281 Sigma-70, region 4 ABU16_3235 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABU16_3235 PF00989 PAS fold ABU16_3235 PF18698 Histidine kinase sensor domain ABU16_3235 PF00512 His Kinase A (phospho-acceptor) domain ABU16_3235 PF00672 HAMP domain ABU16_3236 PF00072 Response regulator receiver domain ABU16_3236 PF00486 Transcriptional regulatory protein, C terminal ABU16_3237 PF01578 Cytochrome C assembly protein ABU16_3238 PF05140 ResB-like family ABU16_3239 PF00578 AhpC/TSA family ABU16_3241 PF00849 RNA pseudouridylate synthase ABU16_3241 PF01479 S4 domain ABU16_3242 PF07670 Nucleoside recognition ABU16_3243 PF07670 Nucleoside recognition ABU16_3244 PF00768 D-alanyl-D-alanine carboxypeptidase ABU16_3244 PF07943 Penicillin-binding protein 5, C-terminal domain ABU16_3245 PF13047 Protein of unknown function (DUF3907) ABU16_3246 PF04079 Segregation and condensation complex subunit ScpB ABU16_3247 PF02616 Segregation and condensation protein ScpA ABU16_3248 PF03745 Domain of unknown function (DUF309) ABU16_3249 PF00583 Acetyltransferase (GNAT) family ABU16_3250 PF00885 6,7-dimethyl-8-ribityllumazine synthase ABU16_3251 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase ABU16_3251 PF00925 GTP cyclohydrolase II ABU16_3252 PF00677 Lumazine binding domain ABU16_3253 PF01872 RibD C-terminal domain ABU16_3253 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region ABU16_3256 PF10502 Signal peptidase, peptidase S26 ABU16_3257 PF09855 Nucleic-acid-binding protein containing Zn-ribbon domain (DUF2082) ABU16_3260 PF10676 Spore germination protein gerPA/gerPF ABU16_3261 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD ABU16_3263 PF06207 Protein of unknown function (DUF1002) ABU16_3264 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain ABU16_3264 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain ABU16_3265 PF03323 Bacillus/Clostridium GerA spore germination protein ABU16_3266 PF14097 Stage V sporulation protein AE1 ABU16_3267 PF03862 SpoVAC/SpoVAEB sporulation membrane protein ABU16_3268 PF07451 Stage V sporulation protein AD (SpoVAD) ABU16_3269 PF03862 SpoVAC/SpoVAEB sporulation membrane protein ABU16_3270 PF13782 Stage V sporulation protein AB ABU16_3271 PF12164 Stage V sporulation protein AA ABU16_3272 PF04539 Sigma-70 region 3 ABU16_3272 PF04542 Sigma-70 region 2 ABU16_3272 PF04545 Sigma-70, region 4 ABU16_3273 PF13581 Histidine kinase-like ATPase domain ABU16_3274 PF01740 STAS domain ABU16_3275 PF07943 Penicillin-binding protein 5, C-terminal domain ABU16_3275 PF00768 D-alanyl-D-alanine carboxypeptidase ABU16_3276 PF01048 Phosphorylase superfamily ABU16_3277 PF01676 Metalloenzyme superfamily ABU16_3278 PF02899 Phage integrase, N-terminal SAM-like domain ABU16_3278 PF00589 Phage integrase family ABU16_3279 PF14004 Protein of unknown function (DUF4227) ABU16_3281 PF01475 Ferric uptake regulator family ABU16_3282 PF01944 Stage II sporulation protein M ABU16_3284 PF03949 Malic enzyme, NAD binding domain ABU16_3284 PF00390 Malic enzyme, N-terminal domain ABU16_3284 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain ABU16_3285 PF03553 Na+/H+ antiporter family ABU16_3286 PF00206 Lyase ABU16_3286 PF10415 Fumarase C C-terminus ABU16_3287 PF00710 Asparaginase, N-terminal ABU16_3287 PF17763 Glutaminase/Asparaginase C-terminal domain ABU16_3288 PF01381 Helix-turn-helix ABU16_3290 PF00293 NUDIX domain ABU16_3291 PF13072 Mother cell inhibitor of FtsZ ABU16_3292 PF00248 Aldo/keto reductase family ABU16_3293 PF13025 Protein of unknown function (DUF3886) ABU16_3295 PF12146 Serine aminopeptidase, S33 ABU16_3296 PF10827 Protein of unknown function (DUF2552) ABU16_3297 PF01521 Iron-sulphur cluster biosynthesis ABU16_3298 PF13673 Acetyltransferase (GNAT) domain ABU16_3298 PF04229 GrpB protein ABU16_3299 PF03992 Antibiotic biosynthesis monooxygenase ABU16_3300 PF00583 Acetyltransferase (GNAT) family ABU16_3301 PF08863 YolD-like protein ABU16_3302 PF00817 impB/mucB/samB family ABU16_3302 PF11799 impB/mucB/samB family C-terminal domain ABU16_3303 PF14164 YqzH-like protein ABU16_3305 PF07690 Major Facilitator Superfamily ABU16_3308 PF00485 Phosphoribulokinase / Uridine kinase family ABU16_3309 PF00291 Pyridoxal-phosphate dependent enzyme ABU16_3310 PF00106 short chain dehydrogenase ABU16_3311 PF00753 Metallo-beta-lactamase superfamily ABU16_3312 PF14748 Pyrroline-5-carboxylate reductase dimerisation ABU16_3312 PF03807 NADP oxidoreductase coenzyme F420-dependent ABU16_3313 PF01546 Peptidase family M20/M25/M40 ABU16_3314 PF00724 NADH:flavin oxidoreductase / NADH oxidase family ABU16_3315 PF12146 Serine aminopeptidase, S33 ABU16_3316 PF00471 Ribosomal protein L33 ABU16_3317 PF12706 Beta-lactamase superfamily domain ABU16_3318 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain ABU16_3318 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain ABU16_3319 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase ABU16_3319 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain ABU16_3320 PF00817 impB/mucB/samB family ABU16_3320 PF11799 impB/mucB/samB family C-terminal domain ABU16_3320 PF11798 IMS family HHH motif ABU16_3322 PF02096 60Kd inner membrane protein ABU16_3324 PF09844 Uncharacterized conserved protein (COG2071) ABU16_3325 PF07687 Peptidase dimerisation domain ABU16_3325 PF01546 Peptidase family M20/M25/M40 ABU16_3326 PF01039 Carboxyl transferase domain ABU16_3328 PF03734 L,D-transpeptidase catalytic domain ABU16_3329 PF06081 Aromatic acid exporter family member 1 ABU16_3329 PF11728 Putative aromatic acid exporter C-terminal domain ABU16_3330 PF00005 ABC transporter ABU16_3331 PF00528 Binding-protein-dependent transport system inner membrane component ABU16_3332 PF00497 Bacterial extracellular solute-binding proteins, family 3 ABU16_3333 PF06491 Disulphide isomerase ABU16_3334 PF00781 Diacylglycerol kinase catalytic domain ABU16_3335 PF07690 Major Facilitator Superfamily ABU16_3336 PF13411 MerR HTH family regulatory protein ABU16_3336 PF06445 GyrI-like small molecule binding domain ABU16_3337 PF02817 e3 binding domain ABU16_3337 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) ABU16_3337 PF00364 Biotin-requiring enzyme ABU16_3338 PF02780 Transketolase, C-terminal domain ABU16_3338 PF02779 Transketolase, pyrimidine binding domain ABU16_3339 PF00676 Dehydrogenase E1 component ABU16_3340 PF07992 Pyridine nucleotide-disulphide oxidoreductase ABU16_3340 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain ABU16_3341 PF00871 Acetokinase family ABU16_3342 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase ABU16_3342 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain ABU16_3343 PF01515 Phosphate acetyl/butaryl transferase ABU16_3344 PF00158 Sigma-54 interaction domain ABU16_3344 PF02954 Bacterial regulatory protein, Fis family ABU16_3344 PF00989 PAS fold ABU16_3345 PF11118 Protein of unknown function (DUF2627) ABU16_3347 PF03972 MmgE/PrpD family ABU16_3348 PF00285 Citrate synthase, C-terminal domain ABU16_3349 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ABU16_3349 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ABU16_3349 PF02770 Acyl-CoA dehydrogenase, middle domain ABU16_3350 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain ABU16_3350 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain ABU16_3351 PF02803 Thiolase, C-terminal domain ABU16_3351 PF00108 Thiolase, N-terminal domain ABU16_3352 PF03009 Glycerophosphoryl diester phosphodiesterase family ABU16_3353 PF01520 N-acetylmuramoyl-L-alanine amidase ABU16_3355 PF00724 NADH:flavin oxidoreductase / NADH oxidase family ABU16_3357 PF00072 Response regulator receiver domain ABU16_3357 PF08769 Sporulation initiation factor Spo0A C terminal ABU16_3359 PF17820 PDZ domain ABU16_3359 PF05580 SpoIVB peptidase S55 ABU16_3360 PF13476 AAA domain ABU16_3361 PF01316 Arginine repressor, DNA binding domain ABU16_3361 PF02863 Arginine repressor, C-terminal domain ABU16_3362 PF01728 FtsJ-like methyltransferase ABU16_3362 PF01479 S4 domain ABU16_3363 PF02780 Transketolase, C-terminal domain ABU16_3363 PF02779 Transketolase, pyrimidine binding domain ABU16_3363 PF13292 1-deoxy-D-xylulose-5-phosphate synthase ABU16_3364 PF00348 Polyprenyl synthetase ABU16_3365 PF02609 Exonuclease VII small subunit ABU16_3366 PF13742 OB-fold nucleic acid binding domain ABU16_3366 PF02601 Exonuclease VII, large subunit ABU16_3367 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain ABU16_3367 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain ABU16_3368 PF01029 NusB family ABU16_3369 PF03780 Asp23 family, cell envelope-related function ABU16_3370 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain ABU16_3370 PF00289 Biotin carboxylase, N-terminal domain ABU16_3370 PF02785 Biotin carboxylase C-terminal domain ABU16_3371 PF00364 Biotin-requiring enzyme ABU16_3372 PF12685 SpoIIIAH-like protein ABU16_3374 PF09581 Stage III sporulation protein AF (Spore_III_AF) ABU16_3375 PF09546 Stage III sporulation protein AE (spore_III_AE) ABU16_3376 PF06686 Stage III sporulation protein AC/AD protein family ABU16_3377 PF06686 Stage III sporulation protein AC/AD protein family ABU16_3378 PF09548 Stage III sporulation protein AB (spore_III_AB) ABU16_3380 PF10942 Protein of unknown function (DUF2619) ABU16_3381 PF09285 Elongation factor P, C-terminal ABU16_3381 PF08207 Elongation factor P (EF-P) KOW-like domain ABU16_3381 PF01132 Elongation factor P (EF-P) OB domain ABU16_3382 PF01321 Creatinase/Prolidase N-terminal domain ABU16_3382 PF00557 Metallopeptidase family M24 ABU16_3383 PF01220 Dehydroquinase class II ABU16_3384 PF11085 Conserved membrane protein YqhR ABU16_3385 PF07136 Protein of unknown function (DUF1385) ABU16_3387 PF01734 Patatin-like phospholipase ABU16_3388 PF01325 Iron dependent repressor, N-terminal DNA binding domain ABU16_3388 PF02742 Iron dependent repressor, metal binding and dimerisation domain ABU16_3389 PF03099 Biotin/lipoate A/B protein ligase family ABU16_3390 PF00581 Rhodanese-like domain ABU16_3391 PF02347 Glycine cleavage system P-protein ABU16_3392 PF02347 Glycine cleavage system P-protein ABU16_3393 PF01571 Aminomethyltransferase folate-binding domain ABU16_3393 PF08669 Glycine cleavage T-protein C-terminal barrel domain ABU16_3394 PF00176 SNF2 family N-terminal domain ABU16_3394 PF00271 Helicase conserved C-terminal domain ABU16_3395 PF11079 Bacterial protein YqhG of unknown function ABU16_3396 PF08671 Anti-repressor SinI ABU16_3397 PF08671 Anti-repressor SinI ABU16_3397 PF01381 Helix-turn-helix ABU16_3398 PF12389 Camelysin metallo-endopeptidase ABU16_3401 PF13028 Protein of unknown function (DUF3889) ABU16_3402 PF14038 YqzE-like protein ABU16_3403 PF14173 ComG operon protein 7 ABU16_3404 PF15980 Putative Competence protein ComGF ABU16_3406 PF07963 Prokaryotic N-terminal methylation motif ABU16_3407 PF07963 Prokaryotic N-terminal methylation motif ABU16_3408 PF00482 Type II secretion system (T2SS), protein F ABU16_3409 PF00437 Type II/IV secretion system protein ABU16_3411 PF01544 CorA-like Mg2+ transporter protein ABU16_3412 PF01595 Cyclin M transmembrane N-terminal domain ABU16_3412 PF03471 Transporter associated domain ABU16_3412 PF00571 CBS domain ABU16_3413 PF14361 RsbT co-antagonist protein rsbRD N-terminal domain ABU16_3413 PF01740 STAS domain ABU16_3414 PF03960 ArsC family ABU16_3415 PF11117 Protein of unknown function (DUF2626) ABU16_3416 PF00753 Metallo-beta-lactamase superfamily ABU16_3417 PF10958 Protein of unknown function (DUF2759) ABU16_3418 PF01910 Thiamine-binding protein ABU16_3420 PF00246 Zinc carboxypeptidase ABU16_3421 PF00884 Sulfatase ABU16_3422 PF00480 ROK family ABU16_3423 PF06014 Bacterial protein of unknown function (DUF910) ABU16_3424 PF01694 Rhomboid family ABU16_3426 PF01812 5-formyltetrahydrofolate cyclo-ligase family ABU16_3428 PF00534 Glycosyl transferases group 1 ABU16_3428 PF13439 Glycosyltransferase Family 4 ABU16_3429 PF13439 Glycosyltransferase Family 4 ABU16_3429 PF00534 Glycosyl transferases group 1 ABU16_3434 PF00005 ABC transporter ABU16_3435 PF00005 ABC transporter ABU16_3436 PF00528 Binding-protein-dependent transport system inner membrane component ABU16_3437 PF00528 Binding-protein-dependent transport system inner membrane component ABU16_3438 PF12849 PBP superfamily domain ABU16_3440 PF07690 Major Facilitator Superfamily ABU16_3441 PF02777 Iron/manganese superoxide dismutases, C-terminal domain ABU16_3441 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain ABU16_3442 PF04306 Protein of unknown function (DUF456) ABU16_3443 PF06691 Protein of unknown function (DUF1189) ABU16_3445 PF04551 GcpE protein ABU16_3448 PF01475 Ferric uptake regulator family ABU16_3449 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 ABU16_3449 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) ABU16_3450 PF11116 Protein of unknown function (DUF2624) ABU16_3451 PF01261 Xylose isomerase-like TIM barrel ABU16_3452 PF00271 Helicase conserved C-terminal domain ABU16_3452 PF00270 DEAD/DEAH box helicase ABU16_3453 PF14181 YqfQ-like protein ABU16_3454 PF02401 LytB protein ABU16_3455 PF01784 NIF3 (NGG1p interacting factor 3) ABU16_3456 PF04816 tRNA (adenine(22)-N(1))-methyltransferase ABU16_3457 PF13442 Cytochrome C oxidase, cbb3-type, subunit III ABU16_3459 PF00140 Sigma-70 factor, region 1.2 ABU16_3459 PF03979 Sigma-70 factor, region 1.1 ABU16_3459 PF04542 Sigma-70 region 2 ABU16_3459 PF04545 Sigma-70, region 4 ABU16_3459 PF04539 Sigma-70 region 3 ABU16_3460 PF08275 DNA primase catalytic core, N-terminal domain ABU16_3460 PF01807 CHC2 zinc finger ABU16_3460 PF10410 DnaB-helicase binding domain of primase ABU16_3461 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 ABU16_3462 PF03618 Kinase/pyrophosphorylase ABU16_3463 PF08279 HTH domain ABU16_3463 PF00571 CBS domain ABU16_3464 PF02092 Glycyl-tRNA synthetase beta subunit ABU16_3465 PF02091 Glycyl-tRNA synthetase alpha subunit ABU16_3466 PF11967 Recombination protein O N terminal ABU16_3466 PF02565 Recombination protein O C terminal ABU16_3467 PF14006 YqzL-like protein ABU16_3468 PF07650 KH domain ABU16_3468 PF01926 50S ribosome-binding GTPase ABU16_3469 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region ABU16_3470 PF01219 Prokaryotic diacylglycerol kinase ABU16_3471 PF02130 Uncharacterized protein family UPF0054 ABU16_3472 PF01966 HD domain ABU16_3472 PF07698 7TM receptor with intracellular HD hydrolase ABU16_3472 PF07697 7TM-HD extracellular ABU16_3473 PF02562 PhoH-like protein ABU16_3474 PF06898 Putative stage IV sporulation protein YqfD ABU16_3475 PF07873 YabP family ABU16_3477 PF12127 SigmaW regulon antibacterial ABU16_3478 PF01972 Serine dehydrogenase proteinase ABU16_3478 PF01957 NfeD-like C-terminal, partner-binding ABU16_3479 PF09424 Yqey-like protein ABU16_3480 PF01165 Ribosomal protein S21 ABU16_3481 PF02690 Na+/Pi-cotransporter ABU16_3482 PF00919 Uncharacterized protein family UPF0004 ABU16_3482 PF01938 TRAM domain ABU16_3482 PF04055 Radical SAM superfamily ABU16_3483 PF04452 RNA methyltransferase ABU16_3485 PF00684 DnaJ central domain ABU16_3485 PF01556 DnaJ C terminal domain ABU16_3485 PF00226 DnaJ domain ABU16_3486 PF00012 Hsp70 protein ABU16_3487 PF01025 GrpE ABU16_3488 PF01628 HrcA protein C terminal domain ABU16_3489 PF04055 Radical SAM superfamily ABU16_3489 PF06969 HemN C-terminal domain ABU16_3490 PF03144 Elongation factor Tu domain 2 ABU16_3490 PF00009 Elongation factor Tu GTP binding domain ABU16_3490 PF00679 Elongation factor G C-terminus ABU16_3490 PF06421 GTP-binding protein LepA C-terminus ABU16_3491 PF12438 Protein of unknown function (DUF3679) ABU16_3492 PF07454 Stage II sporulation protein P (SpoIIP) ABU16_3493 PF03418 Germination protease ABU16_3494 PF01649 Ribosomal protein S20 ABU16_3495 PF06144 DNA polymerase III, delta subunit ABU16_3497 PF14141 YqzM-like protein ABU16_3498 PF03772 Competence protein ABU16_3498 PF13567 Domain of unknown function (DUF4131) ABU16_3498 PF00753 Metallo-beta-lactamase superfamily ABU16_3499 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region ABU16_3500 PF10531 SLBB domain ABU16_3501 PF14748 Pyrroline-5-carboxylate reductase dimerisation ABU16_3501 PF03807 NADP oxidoreductase coenzyme F420-dependent ABU16_3502 PF13649 Methyltransferase domain ABU16_3504 PF01966 HD domain ABU16_3505 PF01467 Cytidylyltransferase-like ABU16_3506 PF01985 CRS1 / YhbY (CRM) domain ABU16_3507 PF18317 Shikimate 5'-dehydrogenase C-terminal domain ABU16_3507 PF08501 Shikimate dehydrogenase substrate binding domain ABU16_3507 PF01488 Shikimate / quinate 5-dehydrogenase ABU16_3508 PF01926 50S ribosome-binding GTPase ABU16_3510 PF08970 Sporulation inhibitor A ABU16_3511 PF00657 GDSL-like Lipase/Acylhydrolase ABU16_3512 PF01510 N-acetylmuramoyl-L-alanine amidase ABU16_3512 PF01471 Putative peptidoglycan binding domain ABU16_3513 PF09335 SNARE associated Golgi protein ABU16_3514 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain ABU16_3514 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase ABU16_3516 PF14040 Deoxyribonuclease NucA/NucB ABU16_3518 PF13408 Recombinase zinc beta ribbon domain ABU16_3518 PF00239 Resolvase, N terminal domain ABU16_3518 PF07508 Recombinase ABU16_3519 PF01451 Low molecular weight phosphotyrosine protein phosphatase ABU16_3520 PF01758 Sodium Bile acid symporter family ABU16_3521 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily ABU16_3522 PF01022 Bacterial regulatory protein, arsR family ABU16_3523 PF08892 YqcI/YcgG family ABU16_3524 PF13181 Tetratricopeptide repeat ABU16_3524 PF18801 response regulator aspartate phosphatase H, N terminal ABU16_3527 PF14449 Pre-toxin TG ABU16_3527 PF14410 HNH/ENDO VII superfamily nuclease with conserved GHE residues ABU16_3527 PF04740 LXG domain of WXG superfamily ABU16_3529 PF05076 Suppressor of fused protein (SUFU) ABU16_3531 PF01471 Putative peptidoglycan binding domain ABU16_3531 PF01510 N-acetylmuramoyl-L-alanine amidase ABU16_3532 PF05105 Bacteriophage holin family ABU16_3534 PF09693 Phage uncharacterised protein (Phage_XkdX) ABU16_3537 PF10076 Uncharacterised protein conserved in bacteria (DUF2313) ABU16_3538 PF04865 Baseplate J-like protein ABU16_3539 PF10934 Protein of unknown function (DUF2634) ABU16_3540 PF10844 Protein of unknown function (DUF2577) ABU16_3542 PF01476 LysM domain ABU16_3543 PF01464 Transglycosylase SLT domain ABU16_3545 PF08890 Phage XkdN-like tail assembly chaperone protein, TAC ABU16_3547 PF09393 Phage tail tube protein ABU16_3548 PF04984 Phage tail sheath protein subtilisin-like domain ABU16_3548 PF17482 Phage tail sheath C-terminal domain ABU16_3548 PF17481 Phage tail sheath protein beta-sandwich domain ABU16_3551 PF04883 Bacteriophage HK97-gp10, putative tail-component ABU16_3552 PF12206 Domain of unknown function (DUF3599) ABU16_3553 PF11436 Protein of unknown function (DUF3199) ABU16_3554 PF14553 YqbF, hypothetical protein domain ABU16_3555 PF05065 Phage capsid family ABU16_3556 PF14550 Putative phage serine protease XkdF ABU16_3558 PF04233 Phage Mu protein F like protein ABU16_3559 PF04860 Phage portal protein ABU16_3560 PF17288 Terminase RNAseH like domain ABU16_3560 PF04466 Phage terminase large subunit ABU16_3561 PF10668 Phage terminase small subunit ABU16_3565 PF17356 Phage-like element PBSX protein XtrA ABU16_3566 PF05866 Endodeoxyribonuclease RusA ABU16_3568 PF01695 IstB-like ATP binding protein ABU16_3569 PF07261 Replication initiation and membrane attachment ABU16_3570 PF03837 RecT family ABU16_3571 PF09588 YqaJ-like viral recombinase domain ABU16_3572 PF09466 Hypothetical protein Yqai ABU16_3573 PF17448 Uncharacterized YqaH-like ABU16_3574 PF01381 Helix-turn-helix ABU16_3576 PF01381 Helix-turn-helix ABU16_3577 PF01381 Helix-turn-helix ABU16_3580 PF06114 IrrE N-terminal-like domain ABU16_3581 PF04545 Sigma-70, region 4 ABU16_3581 PF04542 Sigma-70 region 2 ABU16_3583 PF06146 Phosphate-starvation-inducible E ABU16_3584 PF00512 His Kinase A (phospho-acceptor) domain ABU16_3585 PF00072 Response regulator receiver domain ABU16_3585 PF00486 Transcriptional regulatory protein, C terminal ABU16_3586 PF04235 Protein of unknown function (DUF418) ABU16_3588 PF00583 Acetyltransferase (GNAT) family ABU16_3589 PF02525 Flavodoxin-like fold ABU16_3590 PF13787 Protein of unknown function with HXXEE motif ABU16_3591 PF01925 Sulfite exporter TauE/SafE ABU16_3592 PF01206 Sulfurtransferase TusA ABU16_3593 PF00753 Metallo-beta-lactamase superfamily ABU16_3593 PF00581 Rhodanese-like domain ABU16_3594 PF01206 Sulfurtransferase TusA ABU16_3594 PF00581 Rhodanese-like domain ABU16_3595 PF13686 DsrE/DsrF/DrsH-like family ABU16_3596 PF02583 Metal-sensitive transcriptional repressor ABU16_3598 PF07883 Cupin domain ABU16_3599 PF13411 MerR HTH family regulatory protein ABU16_3599 PF06445 GyrI-like small molecule binding domain ABU16_3600 PF07690 Major Facilitator Superfamily ABU16_3601 PF00583 Acetyltransferase (GNAT) family ABU16_3602 PF00571 CBS domain ABU16_3602 PF01595 Cyclin M transmembrane N-terminal domain ABU16_3602 PF03471 Transporter associated domain ABU16_3603 PF14142 YrzO-like protein ABU16_3604 PF00892 EamA-like transporter family ABU16_3605 PF03466 LysR substrate binding domain ABU16_3605 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABU16_3607 PF01545 Cation efflux family ABU16_3607 PF16916 Dimerisation domain of Zinc Transporter ABU16_3608 PF14552 Tautomerase enzyme ABU16_3609 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABU16_3609 PF03466 LysR substrate binding domain ABU16_3610 PF05525 Branched-chain amino acid transport protein ABU16_3611 PF05437 Branched-chain amino acid transport protein (AzlD) ABU16_3612 PF03591 AzlC protein ABU16_3613 PF01037 Lrp/AsnC ligand binding domain ABU16_3614 PF01337 Barstar (barnase inhibitor) ABU16_3615 PF00067 Cytochrome P450 ABU16_3618 PF00857 Isochorismatase family ABU16_3619 PF05163 DinB family ABU16_3620 PF04439 Streptomycin adenylyltransferase ABU16_3621 PF03060 Nitronate monooxygenase ABU16_3622 PF01177 Asp/Glu/Hydantoin racemase ABU16_3623 PF15493 Domain of unknown function, YrpD ABU16_3625 PF09223 ZinT (YodA) periplasmic lipocalin-like zinc-recruitment ABU16_3626 PF08281 Sigma-70, region 4 ABU16_3626 PF04542 Sigma-70 region 2 ABU16_3627 PF00248 Aldo/keto reductase family ABU16_3628 PF03600 Citrate transporter ABU16_3629 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABU16_3629 PF03466 LysR substrate binding domain ABU16_3631 PF04303 PrpF protein ABU16_3632 PF01374 Glycosyl hydrolase family 46 ABU16_3634 PF00561 alpha/beta hydrolase fold ABU16_3637 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily ABU16_3639 PF07875 Coat F domain ABU16_3640 PF08240 Alcohol dehydrogenase GroES-like domain ABU16_3640 PF13823 Alcohol dehydrogenase GroES-associated ABU16_3640 PF00107 Zinc-binding dehydrogenase ABU16_3642 PF07875 Coat F domain ABU16_3643 PF13411 MerR HTH family regulatory protein ABU16_3645 PF08240 Alcohol dehydrogenase GroES-like domain ABU16_3645 PF00107 Zinc-binding dehydrogenase ABU16_3646 PF01965 DJ-1/PfpI family ABU16_3647 PF00251 Glycosyl hydrolases family 32 N-terminal domain ABU16_3647 PF08244 Glycosyl hydrolases family 32 C terminal ABU16_3648 PF03613 PTS system mannose/fructose/sorbose family IID component ABU16_3649 PF03609 PTS system sorbose-specific iic component ABU16_3650 PF03830 PTS system sorbose subfamily IIB component ABU16_3651 PF03610 PTS system fructose IIA component ABU16_3652 PF03610 PTS system fructose IIA component ABU16_3652 PF00874 PRD domain ABU16_3652 PF00158 Sigma-54 interaction domain ABU16_3653 PF00324 Amino acid permease ABU16_3654 PF01810 LysE type translocator ABU16_3655 PF01978 Sugar-specific transcriptional regulator TrmB ABU16_3655 PF11495 Archaeal transcriptional regulator TrmB ABU16_3656 PF04542 Sigma-70 region 2 ABU16_3656 PF08281 Sigma-70, region 4 ABU16_3657 PF11738 Protein of unknown function (DUF3298) ABU16_3657 PF13739 Deacetylase PdaC ABU16_3658 PF01757 Acyltransferase family ABU16_3659 PF14145 YrhK-like protein ABU16_3660 PF00067 Cytochrome P450 ABU16_3660 PF00175 Oxidoreductase NAD-binding domain ABU16_3660 PF00258 Flavodoxin ABU16_3660 PF00667 FAD binding domain ABU16_3661 PF00440 Bacterial regulatory proteins, tetR family ABU16_3661 PF16295 Tetracyclin repressor-like, C-terminal domain ABU16_3662 PF08241 Methyltransferase domain ABU16_3665 PF09501 Probable sporulation protein (Bac_small_yrzI) ABU16_3666 PF01226 Formate/nitrite transporter ABU16_3667 PF10057 Uncharacterized conserved protein (DUF2294) ABU16_3668 PF00037 4Fe-4S binding domain ABU16_3668 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region ABU16_3668 PF00384 Molybdopterin oxidoreductase ABU16_3668 PF04879 Molybdopterin oxidoreductase Fe4S4 domain ABU16_3668 PF01568 Molydopterin dinucleotide binding domain ABU16_3669 PF07849 Protein of unknown function (DUF1641) ABU16_3670 PF14143 YrhC-like protein ABU16_3671 PF01053 Cys/Met metabolism PLP-dependent enzyme ABU16_3672 PF00291 Pyridoxal-phosphate dependent enzyme ABU16_3673 PF01048 Phosphorylase superfamily ABU16_3674 PF13649 Methyltransferase domain ABU16_3675 PF10750 Protein of unknown function (DUF2536) ABU16_3676 PF07423 Domain of unknown function (DUF1510) ABU16_3677 PF03717 Penicillin-binding Protein dimerisation domain ABU16_3677 PF00905 Penicillin binding protein transpeptidase domain ABU16_3678 PF01272 Transcription elongation factor, GreA/GreB, C-term ABU16_3678 PF03449 Transcription elongation factor, N-terminal ABU16_3683 PF01471 Putative peptidoglycan binding domain ABU16_3683 PF01510 N-acetylmuramoyl-L-alanine amidase ABU16_3683 PF01476 LysM domain ABU16_3684 PF05105 Bacteriophage holin family ABU16_3688 PF12708 Pectate lyase superfamily protein ABU16_3688 PF11962 Peptidase_G2, IMC autoproteolytic cleavage domain ABU16_3689 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase ABU16_3689 PF05257 CHAP domain ABU16_3714 PF00589 Phage integrase family ABU16_3724 PF17356 Phage-like element PBSX protein XtrA ABU16_3735 PF01381 Helix-turn-helix ABU16_3737 PF00589 Phage integrase family ABU16_3737 PF02899 Phage integrase, N-terminal SAM-like domain ABU16_3738 PF00485 Phosphoribulokinase / Uridine kinase family ABU16_3742 PF02618 YceG-like family ABU16_3743 PF06949 Protein of unknown function (DUF1292) ABU16_3744 PF03652 Holliday junction resolvase ABU16_3745 PF06135 IreB regulatory phosphoprotein ABU16_3746 PF02272 DHHA1 domain ABU16_3746 PF01411 tRNA synthetases class II (A) ABU16_3746 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain ABU16_3747 PF01594 AI-2E family transporter ABU16_3748 PF00005 ABC transporter ABU16_3749 PF00497 Bacterial extracellular solute-binding proteins, family 3 ABU16_3750 PF00528 Binding-protein-dependent transport system inner membrane component ABU16_3751 PF00528 Binding-protein-dependent transport system inner membrane component ABU16_3752 PF13056 Protein of unknown function (DUF3918) ABU16_3754 PF05239 PRC-barrel domain ABU16_3755 PF14490 Helix-hairpin-helix containing domain ABU16_3755 PF13538 UvrD-like helicase C-terminal domain ABU16_3755 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain ABU16_3756 PF13181 Tetratricopeptide repeat ABU16_3756 PF07719 Tetratricopeptide repeat ABU16_3758 PF00266 Aminotransferase class-V ABU16_3759 PF02082 Transcriptional regulator ABU16_3760 PF05496 Holliday junction DNA helicase RuvB P-loop domain ABU16_3760 PF12002 MgsA AAA+ ATPase C terminal ABU16_3760 PF16193 AAA C-terminal domain ABU16_3761 PF00899 ThiF family ABU16_3763 PF00152 tRNA synthetases class II (D, K and N) ABU16_3763 PF02938 GAD domain ABU16_3763 PF01336 OB-fold nucleic acid binding domain ABU16_3764 PF03129 Anticodon binding domain ABU16_3764 PF13393 Histidyl-tRNA synthetase ABU16_3765 PF17449 Uncharacterized YrzK-like ABU16_3766 PF08239 Bacterial SH3 domain ABU16_3766 PF01520 N-acetylmuramoyl-L-alanine amidase ABU16_3767 PF02580 D-Tyr-tRNA(Tyr) deacylase ABU16_3768 PF02824 TGS domain ABU16_3768 PF04607 Region found in RelA / SpoT proteins ABU16_3768 PF13291 ACT domain ABU16_3769 PF00156 Phosphoribosyl transferase domain ABU16_3770 PF10141 Single-strand DNA-specific exonuclease, C terminal domain ABU16_3770 PF17768 RecJ OB domain ABU16_3770 PF02272 DHHA1 domain ABU16_3770 PF01368 DHH family ABU16_3771 PF06305 Lipopolysaccharide assembly protein A domain ABU16_3772 PF02080 TrkA-C domain ABU16_3773 PF07549 SecD/SecF GG Motif ABU16_3773 PF02355 Protein export membrane protein ABU16_3774 PF13797 Post-transcriptional regulator ABU16_3775 PF01943 Polysaccharide biosynthesis protein ABU16_3775 PF14667 Polysaccharide biosynthesis C-terminal domain ABU16_3776 PF04239 Protein of unknown function (DUF421) ABU16_3778 PF12670 Protein of unknown function (DUF3792) ABU16_3779 PF02699 Preprotein translocase subunit ABU16_3780 PF01702 Queuine tRNA-ribosyltransferase ABU16_3781 PF02547 Queuosine biosynthesis protein ABU16_3782 PF11146 Protein of unknown function (DUF2905) ABU16_3783 PF17864 RuvB AAA lid domain ABU16_3783 PF05496 Holliday junction DNA helicase RuvB P-loop domain ABU16_3783 PF05491 RuvB C-terminal winged helix domain ABU16_3784 PF07499 RuvA, C-terminal domain ABU16_3784 PF01330 RuvA N terminal domain ABU16_3785 PF08977 Bypass of Forespore C, N terminal ABU16_3785 PF08955 BofC C-terminal domain ABU16_3786 PF07690 Major Facilitator Superfamily ABU16_3787 PF01408 Oxidoreductase family, NAD-binding Rossmann fold ABU16_3787 PF02894 Oxidoreductase family, C-terminal alpha/beta domain ABU16_3792 PF01235 Sodium:alanine symporter family ABU16_3793 PF01709 Transcriptional regulator ABU16_3794 PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) ABU16_3795 PF01476 LysM domain ABU16_3796 PF02445 Quinolinate synthetase A protein ABU16_3797 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain ABU16_3797 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain ABU16_3798 PF02910 Fumarate reductase flavoprotein C-term ABU16_3798 PF00890 FAD binding domain ABU16_3799 PF00266 Aminotransferase class-V ABU16_3800 PF08279 HTH domain ABU16_3800 PF02829 3H domain ABU16_3801 PF00800 Prephenate dehydratase ABU16_3801 PF01842 ACT domain ABU16_3802 PF01842 ACT domain ABU16_3803 PF09269 Domain of unknown function (DUF1967) ABU16_3803 PF01926 50S ribosome-binding GTPase ABU16_3803 PF01018 GTP1/OBG ABU16_3804 PF14682 Sporulation initiation phospho-transferase B, C-terminal ABU16_3804 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain ABU16_3806 PF01016 Ribosomal L27 protein ABU16_3807 PF04327 Cysteine protease Prp ABU16_3808 PF00829 Ribosomal prokaryotic L21 protein ABU16_3809 PF02163 Peptidase family M50 ABU16_3810 PF01551 Peptidase family M23 ABU16_3811 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain ABU16_3812 PF03775 Septum formation inhibitor MinC, C-terminal domain ABU16_3813 PF04093 rod shape-determining protein MreD ABU16_3814 PF04085 rod shape-determining protein MreC ABU16_3816 PF04002 RadC-like JAB domain ABU16_3816 PF00633 Helix-hairpin-helix motif ABU16_3817 PF02545 Maf-like protein ABU16_3818 PF05036 Sporulation related domain ABU16_3819 PF01478 Type IV leader peptidase family ABU16_3819 PF06750 Bacterial Peptidase A24 N-terminal domain ABU16_3821 PF02875 Mur ligase family, glutamate ligase domain ABU16_3821 PF08245 Mur ligase middle domain ABU16_3822 PF08264 Anticodon-binding domain of tRNA ABU16_3822 PF00133 tRNA synthetases class I (I, L, M and V) ABU16_3822 PF10458 Valyl tRNA synthetase tRNA binding arm ABU16_3825 PF01476 LysM domain ABU16_3826 PF00202 Aminotransferase class-III ABU16_3827 PF00490 Delta-aminolevulinic acid dehydratase ABU16_3828 PF02602 Uroporphyrinogen-III synthase HemD ABU16_3829 PF03900 Porphobilinogen deaminase, C-terminal domain ABU16_3829 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain ABU16_3830 PF01578 Cytochrome C assembly protein ABU16_3831 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain ABU16_3831 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain ABU16_3831 PF01488 Shikimate / quinate 5-dehydrogenase ABU16_3833 PF01926 50S ribosome-binding GTPase ABU16_3834 PF00004 ATPase family associated with various cellular activities (AAA) ABU16_3834 PF05362 Lon protease (S16) C-terminal proteolytic domain ABU16_3834 PF02190 ATP-dependent protease La (LON) substrate-binding domain ABU16_3835 PF00004 ATPase family associated with various cellular activities (AAA) ABU16_3835 PF05362 Lon protease (S16) C-terminal proteolytic domain ABU16_3836 PF06689 ClpX C4-type zinc finger ABU16_3836 PF10431 C-terminal, D2-small domain, of ClpB protein ABU16_3836 PF07724 AAA domain (Cdc48 subfamily) ABU16_3837 PF05697 Bacterial trigger factor protein (TF) ABU16_3837 PF05698 Bacterial trigger factor protein (TF) C-terminus ABU16_3837 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase ABU16_3840 PF00694 Aconitase C-terminal domain ABU16_3841 PF00330 Aconitase family (aconitate hydratase) ABU16_3842 PF00180 Isocitrate/isopropylmalate dehydrogenase ABU16_3843 PF08502 LeuA allosteric (dimerisation) domain ABU16_3843 PF00682 HMGL-like ABU16_3844 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain ABU16_3844 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain ABU16_3845 PF10369 Small subunit of acetolactate synthase ABU16_3845 PF01842 ACT domain ABU16_3846 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain ABU16_3846 PF00205 Thiamine pyrophosphate enzyme, central domain ABU16_3846 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain ABU16_3848 PF00583 Acetyltransferase (GNAT) family ABU16_3850 PF09557 Domain of unknown function (DUF2382) ABU16_3850 PF11181 Heat induced stress protein YflT ABU16_3851 PF12850 Calcineurin-like phosphoesterase superfamily domain ABU16_3852 PF01725 Ham1 family ABU16_3853 PF03725 3' exoribonuclease family, domain 2 ABU16_3853 PF01138 3' exoribonuclease family, domain 1 ABU16_3854 PF10646 Sporulation and spore germination ABU16_3855 PF01177 Asp/Glu/Hydantoin racemase ABU16_3856 PF01047 MarR family ABU16_3858 PF00196 Bacterial regulatory proteins, luxR family ABU16_3859 PF03061 Thioesterase superfamily ABU16_3860 PF13085 2Fe-2S iron-sulfur cluster binding domain ABU16_3860 PF13183 4Fe-4S dicluster domain ABU16_3861 PF00890 FAD binding domain ABU16_3861 PF02910 Fumarate reductase flavoprotein C-term ABU16_3862 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit ABU16_3863 PF10702 Protein of unknown function (DUF2507) ABU16_3864 PF13840 ACT domain ABU16_3864 PF00696 Amino acid kinase family ABU16_3864 PF01842 ACT domain ABU16_3866 PF01541 GIY-YIG catalytic domain ABU16_3866 PF02151 UvrB/uvrC motif ABU16_3866 PF08459 UvrC Helix-hairpin-helix N-terminal ABU16_3867 PF00085 Thioredoxin ABU16_3870 PF06964 Alpha-L-arabinofuranosidase C-terminal domain ABU16_3871 PF01012 Electron transfer flavoprotein domain ABU16_3871 PF00766 Electron transfer flavoprotein FAD-binding domain ABU16_3872 PF01012 Electron transfer flavoprotein domain ABU16_3873 PF00378 Enoyl-CoA hydratase/isomerase ABU16_3874 PF08359 YsiA-like protein, C-terminal region ABU16_3874 PF00440 Bacterial regulatory proteins, tetR family ABU16_3875 PF00501 AMP-binding enzyme ABU16_3875 PF13193 AMP-binding enzyme C-terminal domain ABU16_3876 PF03994 Domain of Unknown Function (DUF350) ABU16_3877 PF01713 Smr domain ABU16_3877 PF00488 MutS domain V ABU16_3878 PF02811 PHP domain ABU16_3878 PF14716 Helix-hairpin-helix domain ABU16_3878 PF14791 DNA polymerase beta thumb ABU16_3879 PF02674 Colicin V production protein ABU16_3880 PF05164 Cell division protein ZapA ABU16_3881 PF11858 Domain of unknown function (DUF3378) ABU16_3881 PF01351 Ribonuclease HII ABU16_3882 PF03484 tRNA synthetase B5 domain ABU16_3882 PF03147 Ferredoxin-fold anticodon binding domain ABU16_3882 PF01588 Putative tRNA binding domain ABU16_3882 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain ABU16_3882 PF03483 B3/4 domain ABU16_3883 PF01409 tRNA synthetases class II core domain (F) ABU16_3883 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain ABU16_3885 PF00588 SpoU rRNA Methylase family ABU16_3885 PF08032 RNA 2'-O ribose methyltransferase substrate binding ABU16_3886 PF14098 Small, acid-soluble spore protein I ABU16_3887 PF17853 GGDEF-like domain ABU16_3887 PF13556 PucR C-terminal helix-turn-helix domain ABU16_3887 PF05651 Putative sugar diacid recognition ABU16_3888 PF01565 FAD binding domain ABU16_3888 PF02913 FAD linked oxidases, C-terminal domain ABU16_3889 PF13183 4Fe-4S dicluster domain ABU16_3889 PF02754 Cysteine-rich domain ABU16_3890 PF12681 Glyoxalase-like domain ABU16_3891 PF02554 Carbon starvation protein CstA ABU16_3891 PF13722 5TM C-terminal transporter carbon starvation CstA ABU16_3892 PF06964 Alpha-L-arabinofuranosidase C-terminal domain ABU16_3893 PF00528 Binding-protein-dependent transport system inner membrane component ABU16_3894 PF00528 Binding-protein-dependent transport system inner membrane component ABU16_3895 PF01547 Bacterial extracellular solute-binding protein ABU16_3896 PF13685 Iron-containing alcohol dehydrogenase ABU16_3897 PF13344 Haloacid dehalogenase-like hydrolase ABU16_3898 PF00596 Class II Aldolase and Adducin N-terminal domain ABU16_3899 PF00370 FGGY family of carbohydrate kinases, N-terminal domain ABU16_3899 PF02782 FGGY family of carbohydrate kinases, C-terminal domain ABU16_3900 PF11762 L-arabinose isomerase C-terminal domain ABU16_3900 PF02610 L-arabinose isomerase ABU16_3901 PF04616 Glycosyl hydrolases family 43 ABU16_3902 PF05343 M42 glutamyl aminopeptidase ABU16_3904 PF06961 Protein of unknown function (DUF1294) ABU16_3905 PF00453 Ribosomal protein L20 ABU16_3906 PF01632 Ribosomal protein L35 ABU16_3907 PF05198 Translation initiation factor IF-3, N-terminal domain ABU16_3907 PF00707 Translation initiation factor IF-3, C-terminal domain ABU16_3910 PF04172 LrgB-like family ABU16_3911 PF03788 LrgA family ABU16_3912 PF00072 Response regulator receiver domain ABU16_3912 PF04397 LytTr DNA-binding domain ABU16_3913 PF07694 5TMR of 5TMR-LYT ABU16_3913 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABU16_3913 PF06580 Histidine kinase ABU16_3915 PF02824 TGS domain ABU16_3915 PF03129 Anticodon binding domain ABU16_3915 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain ABU16_3915 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) ABU16_3917 PF08812 YtxC-like family ABU16_3918 PF09335 SNARE associated Golgi protein ABU16_3919 PF07319 Primosomal protein DnaI N-terminus ABU16_3919 PF01695 IstB-like ATP binding protein ABU16_3920 PF07261 Replication initiation and membrane attachment ABU16_3921 PF03477 ATP cone domain ABU16_3922 PF02675 S-adenosylmethionine decarboxylase ABU16_3923 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain ABU16_3923 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain ABU16_3924 PF01638 HxlR-like helix-turn-helix ABU16_3925 PF07690 Major Facilitator Superfamily ABU16_3926 PF00248 Aldo/keto reductase family ABU16_3927 PF01121 Dephospho-CoA kinase ABU16_3928 PF02659 Putative manganese efflux pump ABU16_3929 PF06827 Zinc finger found in FPG and IleRS ABU16_3929 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain ABU16_3929 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain ABU16_3930 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain ABU16_3930 PF00476 DNA polymerase family A ABU16_3930 PF01367 5'-3' exonuclease, C-terminal SAM fold ABU16_3931 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABU16_3931 PF16736 Single Cache-like ABU16_3931 PF00989 PAS fold ABU16_3931 PF00512 His Kinase A (phospho-acceptor) domain ABU16_3932 PF00486 Transcriptional regulatory protein, C terminal ABU16_3932 PF00072 Response regulator receiver domain ABU16_3934 PF00056 lactate/malate dehydrogenase, NAD binding domain ABU16_3934 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain ABU16_3935 PF00180 Isocitrate/isopropylmalate dehydrogenase ABU16_3936 PF00285 Citrate synthase, C-terminal domain ABU16_3937 PF04284 Protein of unknown function (DUF441) ABU16_3938 PF01594 AI-2E family transporter ABU16_3939 PF04186 FxsA cytoplasmic membrane protein ABU16_3940 PF00391 PEP-utilising enzyme, mobile domain ABU16_3940 PF00224 Pyruvate kinase, barrel domain ABU16_3940 PF02887 Pyruvate kinase, alpha/beta domain ABU16_3941 PF00365 Phosphofructokinase ABU16_3942 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit ABU16_3943 PF17848 Acetyl-coA carboxylase zinc finger domain ABU16_3943 PF01039 Carboxyl transferase domain ABU16_3944 PF00390 Malic enzyme, N-terminal domain ABU16_3944 PF03949 Malic enzyme, NAD binding domain ABU16_3945 PF17657 Bacterial DNA polymerase III alpha subunit finger domain ABU16_3945 PF07733 Bacterial DNA polymerase III alpha NTPase domain ABU16_3945 PF01336 OB-fold nucleic acid binding domain ABU16_3945 PF14579 Helix-hairpin-helix motif ABU16_3945 PF02811 PHP domain ABU16_3946 PF14034 Sporulation protein YtrH ABU16_3949 PF02272 DHHA1 domain ABU16_3949 PF01368 DHH family ABU16_3951 PF14007 YtpI-like protein ABU16_3952 PF07085 DRTGG domain ABU16_3952 PF00571 CBS domain ABU16_3952 PF00392 Bacterial regulatory proteins, gntR family ABU16_3952 PF03061 Thioesterase superfamily ABU16_3953 PF01925 Sulfite exporter TauE/SafE ABU16_3954 PF01546 Peptidase family M20/M25/M40 ABU16_3954 PF07687 Peptidase dimerisation domain ABU16_3955 PF01687 Riboflavin kinase ABU16_3956 PF00296 Luciferase-like monooxygenase ABU16_3957 PF00462 Glutaredoxin ABU16_3958 PF00296 Luciferase-like monooxygenase ABU16_3959 PF00005 ABC transporter ABU16_3960 PF00528 Binding-protein-dependent transport system inner membrane component ABU16_3961 PF00528 Binding-protein-dependent transport system inner membrane component ABU16_3962 PF00497 Bacterial extracellular solute-binding proteins, family 3 ABU16_3963 PF00497 Bacterial extracellular solute-binding proteins, family 3 ABU16_3964 PF00583 Acetyltransferase (GNAT) family ABU16_3965 PF03466 LysR substrate binding domain ABU16_3965 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABU16_3969 PF14698 Argininosuccinate lyase C-terminal ABU16_3969 PF00206 Lyase ABU16_3970 PF00764 Arginosuccinate synthase ABU16_3971 PF00994 Probable molybdopterin binding domain ABU16_3972 PF00871 Acetokinase family ABU16_3974 PF02384 N-6 DNA Methylase ABU16_3975 PF08534 Redoxin ABU16_3976 PF09579 Sporulation protein YtfJ (Spore_YtfJ) ABU16_3977 PF11167 Protein of unknown function (DUF2953) ABU16_3978 PF06271 RDD family ABU16_3979 PF01343 Peptidase family S49 ABU16_3981 PF01513 ATP-NAD kinase ABU16_3982 PF07969 Amidohydrolase family ABU16_3983 PF13193 AMP-binding enzyme C-terminal domain ABU16_3983 PF00501 AMP-binding enzyme ABU16_3984 PF00269 Small, acid-soluble spore proteins, alpha/beta type ABU16_3985 PF02926 THUMP domain ABU16_3985 PF02568 Thiamine biosynthesis protein (ThiI) ABU16_3986 PF00266 Aminotransferase class-V ABU16_3987 PF05525 Branched-chain amino acid transport protein ABU16_3988 PF06160 Septation ring formation regulator, EzrA ABU16_3989 PF02811 PHP domain ABU16_3990 PF00440 Bacterial regulatory proteins, tetR family ABU16_3991 PF13185 GAF domain ABU16_3992 PF00990 Diguanylate cyclase, GGDEF domain ABU16_3994 PF00163 Ribosomal protein S4/S9 N-terminal domain ABU16_3994 PF01479 S4 domain ABU16_3996 PF00579 tRNA synthetases class I (W and Y) ABU16_3996 PF01479 S4 domain ABU16_3997 PF00501 AMP-binding enzyme ABU16_3997 PF13193 AMP-binding enzyme C-terminal domain ABU16_3998 PF00583 Acetyltransferase (GNAT) family ABU16_3999 PF00571 CBS domain ABU16_4000 PF00850 Histone deacetylase domain ABU16_4001 PF00691 OmpA family ABU16_4001 PF13677 Membrane MotB of proton-channel complex MotA/MotB ABU16_4002 PF01618 MotA/TolQ/ExbB proton channel family ABU16_4003 PF00356 Bacterial regulatory proteins, lacI family ABU16_4004 PF00793 DAHP synthetase I family ABU16_4004 PF01817 Chorismate mutase type II ABU16_4005 PF11009 Protein of unknown function (DUF2847) ABU16_4006 PF12732 YtxH-like protein ABU16_4007 PF06103 Bacterial protein of unknown function (DUF948) ABU16_4008 PF08245 Mur ligase middle domain ABU16_4008 PF02875 Mur ligase family, glutamate ligase domain ABU16_4008 PF01225 Mur ligase family, catalytic domain ABU16_4009 PF17854 FtsK alpha domain ABU16_4009 PF01580 FtsK/SpoIIIE family ABU16_4009 PF09397 Ftsk gamma domain ABU16_4010 PF14794 Domain of unknown function (DUF4479) ABU16_4010 PF01588 Putative tRNA binding domain ABU16_4011 PF07285 Protein of unknown function (DUF1444) ABU16_4012 PF00085 Thioredoxin ABU16_4014 PF11071 Nucleoside 2-deoxyribosyltransferase YtoQ ABU16_4015 PF05343 M42 glutamyl aminopeptidase ABU16_4016 PF03413 Peptidase propeptide and YPEB domain ABU16_4017 PF00390 Malic enzyme, N-terminal domain ABU16_4017 PF03949 Malic enzyme, NAD binding domain ABU16_4018 PF00753 Metallo-beta-lactamase superfamily ABU16_4019 PF02390 Putative methyltransferase ABU16_4020 PF14165 YtzH-like protein ABU16_4021 PF01636 Phosphotransferase enzyme family ABU16_4022 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) ABU16_4022 PF17999 Pullulanase N1-terminal domain ABU16_4022 PF00128 Alpha amylase, catalytic domain ABU16_4023 PF00781 Diacylglycerol kinase catalytic domain ABU16_4026 PF00291 Pyridoxal-phosphate dependent enzyme ABU16_4027 PF01546 Peptidase family M20/M25/M40 ABU16_4028 PF00860 Permease family ABU16_4029 PF05975 Bacterial ABC transporter protein EcsB ABU16_4030 PF00005 ABC transporter ABU16_4031 PF08220 DeoR-like helix-turn-helix domain ABU16_4032 PF01479 S4 domain ABU16_4032 PF00849 RNA pseudouridylate synthase ABU16_4033 PF14667 Polysaccharide biosynthesis C-terminal domain ABU16_4033 PF01943 Polysaccharide biosynthesis protein ABU16_4035 PF02028 BCCT, betaine/carnitine/choline family transporter ABU16_4036 PF10957 Sporulation protein Cse60 ABU16_4037 PF04854 Protein of unknown function, DUF624 ABU16_4038 PF02894 Oxidoreductase family, C-terminal alpha/beta domain ABU16_4038 PF01408 Oxidoreductase family, NAD-binding Rossmann fold ABU16_4040 PF07470 Glycosyl Hydrolase Family 88 ABU16_4041 PF00528 Binding-protein-dependent transport system inner membrane component ABU16_4042 PF17853 GGDEF-like domain ABU16_4042 PF12833 Helix-turn-helix domain ABU16_4043 PF13416 Bacterial extracellular solute-binding protein ABU16_4044 PF00528 Binding-protein-dependent transport system inner membrane component ABU16_4045 PF01370 NAD dependent epimerase/dehydratase family ABU16_4046 PF00067 Cytochrome P450 ABU16_4047 PF06968 Biotin and Thiamin Synthesis associated domain ABU16_4047 PF04055 Radical SAM superfamily ABU16_4049 PF00155 Aminotransferase class I and II ABU16_4050 PF00202 Aminotransferase class-III ABU16_4051 PF03744 6-carboxyhexanoate--CoA ligase ABU16_4052 PF01738 Dienelactone hydrolase family ABU16_4057 PF11975 Family 4 glycosyl hydrolase C-terminal domain ABU16_4057 PF02056 Family 4 glycosyl hydrolase ABU16_4058 PF00581 Rhodanese-like domain ABU16_4059 PF13603 Leucyl-tRNA synthetase, Domain 2 ABU16_4059 PF09334 tRNA synthetases class I (M) ABU16_4059 PF08264 Anticodon-binding domain of tRNA ABU16_4059 PF00133 tRNA synthetases class I (I, L, M and V) ABU16_4060 PF14074 Protein of unknown function (DUF4257) ABU16_4062 PF01740 STAS domain ABU16_4062 PF13426 PAS domain ABU16_4063 PF07690 Major Facilitator Superfamily ABU16_4064 PF04791 LMBR1-like membrane protein ABU16_4065 PF02687 FtsX-like permease family ABU16_4066 PF00005 ABC transporter ABU16_4067 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABU16_4068 PF00486 Transcriptional regulatory protein, C terminal ABU16_4068 PF00072 Response regulator receiver domain ABU16_4069 PF12704 MacB-like periplasmic core domain ABU16_4069 PF02687 FtsX-like permease family ABU16_4070 PF00005 ABC transporter ABU16_4073 PF00005 ABC transporter ABU16_4074 PF00392 Bacterial regulatory proteins, gntR family ABU16_4076 PF10732 Protein of unknown function (DUF2524) ABU16_4077 PF16199 Radical_SAM C-terminal domain ABU16_4077 PF04055 Radical SAM superfamily ABU16_4078 PF06962 Putative rRNA methylase ABU16_4079 PF10776 Protein of unknown function (DUF2600) ABU16_4080 PF12146 Serine aminopeptidase, S33 ABU16_4081 PF00132 Bacterial transferase hexapeptide (six repeats) ABU16_4082 PF00324 Amino acid permease ABU16_4083 PF13537 Glutamine amidotransferase domain ABU16_4083 PF00733 Asparagine synthase ABU16_4084 PF00438 S-adenosylmethionine synthetase, N-terminal domain ABU16_4084 PF02772 S-adenosylmethionine synthetase, central domain ABU16_4084 PF02773 S-adenosylmethionine synthetase, C-terminal domain ABU16_4085 PF01293 Phosphoenolpyruvate carboxykinase ABU16_4086 PF10763 Protein of unknown function (DUF2584) ABU16_4087 PF00326 Prolyl oligopeptidase family ABU16_4089 PF00005 ABC transporter ABU16_4090 PF00528 Binding-protein-dependent transport system inner membrane component ABU16_4091 PF00293 NUDIX domain ABU16_4092 PF05105 Bacteriophage holin family ABU16_4093 PF00210 Ferritin-like domain ABU16_4095 PF13115 YtkA-like ABU16_4096 PF02664 S-Ribosylhomocysteinase (LuxS) ABU16_4097 PF01809 Putative membrane protein insertion efficiency factor ABU16_4098 PF00484 Carbonic anhydrase ABU16_4099 PF01197 Ribosomal protein L31 ABU16_4100 PF01654 Cytochrome bd terminal oxidase subunit I ABU16_4101 PF02322 Cytochrome bd terminal oxidase subunit II ABU16_4102 PF07561 Domain of Unknown Function (DUF1540) ABU16_4103 PF00950 ABC 3 transport family ABU16_4104 PF00950 ABC 3 transport family ABU16_4105 PF00005 ABC transporter ABU16_4106 PF01297 Zinc-uptake complex component A periplasmic ABU16_4107 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain ABU16_4107 PF13378 Enolase C-terminal domain-like ABU16_4108 PF00501 AMP-binding enzyme ABU16_4108 PF13193 AMP-binding enzyme C-terminal domain ABU16_4109 PF00378 Enoyl-CoA hydratase/isomerase ABU16_4110 PF00561 alpha/beta hydrolase fold ABU16_4111 PF16582 Middle domain of thiamine pyrophosphate ABU16_4111 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain ABU16_4111 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain ABU16_4112 PF00425 chorismate binding enzyme ABU16_4114 PF01258 Prokaryotic dksA/traR C4-type zinc finger ABU16_4115 PF00483 Nucleotidyl transferase ABU16_4116 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain ABU16_4116 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain ABU16_4116 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain ABU16_4117 PF01370 NAD dependent epimerase/dehydratase family ABU16_4118 PF13439 Glycosyltransferase Family 4 ABU16_4118 PF00534 Glycosyl transferases group 1 ABU16_4121 PF00534 Glycosyl transferases group 1 ABU16_4121 PF13439 Glycosyltransferase Family 4 ABU16_4122 PF01636 Phosphotransferase enzyme family ABU16_4123 PF03073 TspO/MBR family ABU16_4124 PF00343 Carbohydrate phosphorylase ABU16_4125 PF00534 Glycosyl transferases group 1 ABU16_4125 PF08323 Starch synthase catalytic domain ABU16_4126 PF00483 Nucleotidyl transferase ABU16_4127 PF00483 Nucleotidyl transferase ABU16_4128 PF02806 Alpha amylase, C-terminal all-beta domain ABU16_4128 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) ABU16_4128 PF00128 Alpha amylase, catalytic domain ABU16_4129 PF09515 Thiamine transporter protein (Thia_YuaJ) ABU16_4130 PF00583 Acetyltransferase (GNAT) family ABU16_4131 PF15975 Flotillin ABU16_4131 PF01145 SPFH domain / Band 7 family ABU16_4133 PF12867 DinB superfamily ABU16_4135 PF00465 Iron-containing alcohol dehydrogenase ABU16_4138 PF17735 Biofilm surface layer A ABU16_4139 PF02080 TrkA-C domain ABU16_4139 PF02254 TrkA-N domain ABU16_4140 PF02386 Cation transport protein ABU16_4141 PF05360 yiaA/B two helix domain ABU16_4142 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase ABU16_4142 PF13457 GW (Gly-Tryp) dipeptide domain ABU16_4143 PF07690 Major Facilitator Superfamily ABU16_4144 PF05995 Cysteine dioxygenase type I ABU16_4146 PF02673 Bacitracin resistance protein BacA ABU16_4147 PF01594 AI-2E family transporter ABU16_4148 PF01408 Oxidoreductase family, NAD-binding Rossmann fold ABU16_4148 PF02894 Oxidoreductase family, C-terminal alpha/beta domain ABU16_4149 PF06134 L-rhamnose isomerase (RhaA) ABU16_4150 PF05336 L-rhamnose mutarotase ABU16_4151 PF00370 FGGY family of carbohydrate kinases, N-terminal domain ABU16_4151 PF02782 FGGY family of carbohydrate kinases, C-terminal domain ABU16_4152 PF00455 DeoR C terminal sensor domain ABU16_4152 PF08220 DeoR-like helix-turn-helix domain ABU16_4153 PF00596 Class II Aldolase and Adducin N-terminal domain ABU16_4155 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ABU16_4155 PF02743 Cache domain ABU16_4155 PF00672 HAMP domain ABU16_4156 PF00672 HAMP domain ABU16_4156 PF02743 Cache domain ABU16_4156 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ABU16_4157 PF02743 Cache domain ABU16_4157 PF00672 HAMP domain ABU16_4157 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ABU16_4158 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ABU16_4158 PF02743 Cache domain ABU16_4158 PF00672 HAMP domain ABU16_4162 PF01894 Uncharacterised protein family UPF0047 ABU16_4163 PF00128 Alpha amylase, catalytic domain ABU16_4163 PF16657 Maltogenic Amylase, C-terminal domain ABU16_4164 PF00571 CBS domain ABU16_4164 PF01595 Cyclin M transmembrane N-terminal domain ABU16_4164 PF03471 Transporter associated domain ABU16_4165 PF04298 Putative neutral zinc metallopeptidase ABU16_4167 PF11458 Membrane-integrating protein Mistic ABU16_4168 PF02254 TrkA-N domain ABU16_4168 PF07885 Ion channel ABU16_4169 PF08868 YugN-like family ABU16_4171 PF00342 Phosphoglucose isomerase ABU16_4172 PF00465 Iron-containing alcohol dehydrogenase ABU16_4173 PF00465 Iron-containing alcohol dehydrogenase ABU16_4174 PF04070 Domain of unknown function (DUF378) ABU16_4175 PF00575 S1 RNA binding domain ABU16_4176 PF00155 Aminotransferase class I and II ABU16_4177 PF01037 Lrp/AsnC ligand binding domain ABU16_4178 PF08386 TAP-like protein ABU16_4178 PF00561 alpha/beta hydrolase fold ABU16_4179 PF08958 Domain of unknown function (DUF1871) ABU16_4180 PF00155 Aminotransferase class I and II ABU16_4181 PF00512 His Kinase A (phospho-acceptor) domain ABU16_4181 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABU16_4182 PF08810 Kinase associated protein B ABU16_4183 PF00929 Exonuclease ABU16_4185 PF07690 Major Facilitator Superfamily ABU16_4186 PF00912 Transglycosylase ABU16_4186 PF00905 Penicillin binding protein transpeptidase domain ABU16_4187 PF04134 Protein of unknown function, DUF393 ABU16_4188 PF17328 Family of unknown function (DUF5366) ABU16_4189 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain ABU16_4189 PF17203 Single cache domain 3 ABU16_4189 PF00989 PAS fold ABU16_4189 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABU16_4190 PF00072 Response regulator receiver domain ABU16_4195 PF03390 2-hydroxycarboxylate transporter family ABU16_4197 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus ABU16_4197 PF13244 Domain of unknown function (DUF4040) ABU16_4197 PF00361 Proton-conducting membrane transporter ABU16_4198 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter ABU16_4199 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L ABU16_4200 PF00361 Proton-conducting membrane transporter ABU16_4201 PF01899 Na+/H+ ion antiporter subunit ABU16_4202 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) ABU16_4203 PF03334 Na+/H+ antiporter subunit ABU16_4204 PF03061 Thioesterase superfamily ABU16_4205 PF00196 Bacterial regulatory proteins, luxR family ABU16_4205 PF00072 Response regulator receiver domain ABU16_4206 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABU16_4206 PF07730 Histidine kinase ABU16_4209 PF00348 Polyprenyl synthetase ABU16_4210 PF08181 DegQ (SacQ) family ABU16_4213 PF00563 EAL domain ABU16_4213 PF08668 HDOD domain ABU16_4214 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain ABU16_4214 PF17956 Nicotinate phosphoribosyltransferase C-terminal domain ABU16_4214 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family ABU16_4215 PF00857 Isochorismatase family ABU16_4216 PF07997 Protein of unknown function (DUF1694) ABU16_4217 PF14166 YueH-like protein ABU16_4218 PF10676 Spore germination protein gerPA/gerPF ABU16_4219 PF01594 AI-2E family transporter ABU16_4220 PF10049 Protein of unknown function (DUF2283) ABU16_4221 PF10842 Protein of unknown function (DUF2642) ABU16_4222 PF01966 HD domain ABU16_4223 PF00106 short chain dehydrogenase ABU16_4224 PF17355 Family of unknown function (DUF5383) ABU16_4226 PF12538 DNA transporter ABU16_4226 PF01580 FtsK/SpoIIIE family ABU16_4227 PF10140 WXG100 protein secretion system (Wss), protein YukC ABU16_4228 PF10140 WXG100 protein secretion system (Wss), protein YukC ABU16_4229 PF08817 WXG100 protein secretion system (Wss), protein YukD ABU16_4230 PF06013 Proteins of 100 residues with WXG