ABU16_0008 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. ABU16_0018 SM01002 Alanine dehydrogenase/PNT, C-terminal domain ABU16_0018 SM01003 Alanine dehydrogenase/PNT, N-terminal domain ABU16_0020 SM00923 MbtH-like protein ABU16_0021 SM00823 Phosphopantetheine attachment site ABU16_0021 SM00824 Thioesterase ABU16_0038 SM01240 ABU16_0038 ABU16_0059 SM00729 Elongator protein 3, MiaB family, Radical SAM ABU16_0075 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain ABU16_0083 SM00382 ATPases associated with a variety of cellular activities ABU16_0084 SM00345 helix_turn_helix gluconate operon transcriptional repressor ABU16_0084 SM00866 ABU16_0084 ABU16_0090 SM00465 GIY-YIG type nucleases (URI domain) ABU16_0101 SM00382 ATPases associated with a variety of cellular activities ABU16_0108 SM00382 ATPases associated with a variety of cellular activities ABU16_0108 SM00930 ABU16_0108 ABU16_0112 SM00493 ABU16_0112 ABU16_0123 SM00347 helix_turn_helix multiple antibiotic resistance protein ABU16_0130 SM00382 ATPases associated with a variety of cellular activities ABU16_0135 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. ABU16_0136 SM00448 cheY-homologous receiver domain ABU16_0136 SM00862 Transcriptional regulatory protein, C terminal ABU16_0137 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain ABU16_0137 SM00387 Histidine kinase-like ATPases ABU16_0137 SM00388 His Kinase A (phosphoacceptor) domain ABU16_0145 SM00421 helix_turn_helix, Lux Regulon ABU16_0145 SM00448 cheY-homologous receiver domain ABU16_0146 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain ABU16_0146 SM00387 Histidine kinase-like ATPases ABU16_0154 SM00382 ATPases associated with a variety of cellular activities ABU16_0160 SM00387 Histidine kinase-like ATPases ABU16_0160 SM00388 His Kinase A (phosphoacceptor) domain ABU16_0161 SM00448 cheY-homologous receiver domain ABU16_0161 SM00862 Transcriptional regulatory protein, C terminal ABU16_0167 SM00835 Cupin ABU16_0170 SM00382 ATPases associated with a variety of cellular activities ABU16_0172 SM00382 ATPases associated with a variety of cellular activities ABU16_0206 SM00316 Ribosomal protein S1-like RNA-binding domain ABU16_0206 SM00357 Cold shock protein domain ABU16_0206 SM00955 ABU16_0206 ABU16_0210 SM00530 Helix-turn-helix XRE-family like proteins ABU16_0211 SM00530 Helix-turn-helix XRE-family like proteins ABU16_0212 SM00530 Helix-turn-helix XRE-family like proteins ABU16_0214 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). ABU16_0214 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain ABU16_0218 SM00116 Domain in cystathionine beta-synthase and other proteins. ABU16_0218 SM00382 ATPases associated with a variety of cellular activities ABU16_0220 SM00752 Horizontally Transferred TransMembrane Domain ABU16_0223 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor ABU16_0227 SM00116 Domain in cystathionine beta-synthase and other proteins. ABU16_0227 SM00382 ATPases associated with a variety of cellular activities ABU16_0234 SM01192 ABU16_0234 ABU16_0234 SM01193 ABU16_0234 ABU16_0238 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain ABU16_0241 SM00345 helix_turn_helix gluconate operon transcriptional repressor ABU16_0246 SM00636 ABU16_0246 ABU16_0250 SM00421 helix_turn_helix, Lux Regulon ABU16_0250 SM00448 cheY-homologous receiver domain ABU16_0253 SM00382 ATPases associated with a variety of cellular activities ABU16_0256 SM00331 Sigma factor PP2C-like phosphatases ABU16_0262 SM00354 helix_turn _helix lactose operon repressor ABU16_0263 SM00345 helix_turn_helix gluconate operon transcriptional repressor ABU16_0263 SM00895 ABU16_0263 ABU16_0283 SM00530 Helix-turn-helix XRE-family like proteins ABU16_0292 SM00640 Glycosyl hydrolases family 32 ABU16_0302 SM00642 Alpha-amylase domain ABU16_0308 SM00642 Alpha-amylase domain ABU16_0309 SM00354 helix_turn _helix lactose operon repressor ABU16_0313 SM00947 Carbonic anhydrase ABU16_0316 SM00382 ATPases associated with a variety of cellular activities ABU16_0317 SM00387 Histidine kinase-like ATPases ABU16_0318 SM00448 cheY-homologous receiver domain ABU16_0318 SM00862 Transcriptional regulatory protein, C terminal ABU16_0328 SM00028 Tetratricopeptide repeats ABU16_0329 SM00382 ATPases associated with a variety of cellular activities ABU16_0350 SM00345 helix_turn_helix gluconate operon transcriptional repressor ABU16_0350 SM00866 ABU16_0350 ABU16_0352 SM00347 helix_turn_helix multiple antibiotic resistance protein ABU16_0356 SM00347 helix_turn_helix multiple antibiotic resistance protein ABU16_0364 SM00382 ATPases associated with a variety of cellular activities ABU16_0365 SM00487 DEAD-like helicases superfamily ABU16_0365 SM00490 helicase superfamily c-terminal domain ABU16_0371 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. ABU16_0373 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. ABU16_0373 SM00245 tail specific protease ABU16_0375 SM00382 ATPases associated with a variety of cellular activities ABU16_0378 SM00937 ABU16_0378 ABU16_0379 SM00957 SecA DEAD-like domain ABU16_0379 SM00958 SecA preprotein cross-linking domain ABU16_0397 SM00487 DEAD-like helicases superfamily ABU16_0397 SM00490 helicase superfamily c-terminal domain ABU16_0399 SM00421 helix_turn_helix, Lux Regulon ABU16_0399 SM00448 cheY-homologous receiver domain ABU16_0400 SM00387 Histidine kinase-like ATPases ABU16_0408 SM00984 UDP binding domain ABU16_0412 SM00646 ABU16_0412 ABU16_0422 SM00382 ATPases associated with a variety of cellular activities ABU16_0430 SM00047 Lysozyme subfamily 2 ABU16_0430 SM00287 Bacterial SH3 domain homologues ABU16_0441 SM00854 Bacterial capsule synthesis protein PGA_cap ABU16_0445 SM00354 helix_turn _helix lactose operon repressor ABU16_0448 SM00382 ATPases associated with a variety of cellular activities ABU16_0451 SM00287 Bacterial SH3 domain homologues ABU16_0461 SM00903 Flavin reductase like domain ABU16_0464 SM00344 helix_turn_helix ASNC type ABU16_0476 SM00984 UDP binding domain ABU16_0482 SM00487 DEAD-like helicases superfamily ABU16_0482 SM00490 helicase superfamily c-terminal domain ABU16_0484 SM00420 helix_turn_helix, Deoxyribose operon repressor ABU16_0484 SM01134 ABU16_0484 ABU16_0491 SM00387 Histidine kinase-like ATPases ABU16_0494 SM00028 Tetratricopeptide repeats ABU16_0499 SM00347 helix_turn_helix multiple antibiotic resistance protein ABU16_0501 SM00710 Parallel beta-helix repeats ABU16_0501 SM00722 Domain present in carbohydrate binding proteins and sugar hydrolses ABU16_0507 SM00938 Nitrogen regulatory protein P-II ABU16_0508 SM00014 Acid phosphatase homologues ABU16_0516 SM00155 Phospholipase D. Active site motifs. ABU16_0517 SM00422 helix_turn_helix, mercury resistance ABU16_0528 SM00028 Tetratricopeptide repeats ABU16_0529 SM00729 Elongator protein 3, MiaB family, Radical SAM ABU16_0532 SM00327 von Willebrand factor (vWF) type A domain ABU16_0534 SM00327 von Willebrand factor (vWF) type A domain ABU16_0542 SM00382 ATPases associated with a variety of cellular activities ABU16_0555 SM00226 Low molecular weight phosphatase family ABU16_0563 SM00937 ABU16_0563 ABU16_0567 SM00919 Malic enzyme, NAD binding domain ABU16_0567 SM01274 ABU16_0567 ABU16_0570 SM00357 Cold shock protein domain ABU16_0570 SM00382 ATPases associated with a variety of cellular activities ABU16_0570 SM00959 Rho termination factor, N-terminal domain ABU16_0576 SM00448 cheY-homologous receiver domain ABU16_0583 SM00155 Phospholipase D. Active site motifs. ABU16_0587 SM00382 ATPases associated with a variety of cellular activities ABU16_0588 SM00155 Phospholipase D. Active site motifs. ABU16_0593 SM00926 Molybdopterin oxidoreductase Fe4S4 domain ABU16_0597 SM00100 Cyclic nucleotide-monophosphate binding domain ABU16_0597 SM00419 helix_turn_helix, cAMP Regulatory protein ABU16_0599 SM00836 DALR anticodon binding domain ABU16_0599 SM01016 Arginyl tRNA synthetase N terminal dom ABU16_0602 SM00729 Elongator protein 3, MiaB family, Radical SAM ABU16_0612 SM00028 Tetratricopeptide repeats ABU16_0620 SM00347 helix_turn_helix multiple antibiotic resistance protein ABU16_0621 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain ABU16_0626 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. ABU16_0646 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase ABU16_0654 SM00858 ABU16_0654 ABU16_0666 SM00986 Uracil DNA glycosylase superfamily ABU16_0666 SM00987 UreE urease accessory protein, C-terminal domain ABU16_0673 SM00640 Glycosyl hydrolases family 32 ABU16_0676 SM01061 CAT RNA binding domain ABU16_0706 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase ABU16_0709 SM00612 ABU16_0709 ABU16_0714 SM01061 CAT RNA binding domain ABU16_0717 SM00347 helix_turn_helix multiple antibiotic resistance protein ABU16_0718 SM00363 S4 RNA-binding domain ABU16_0720 SM00954 Region found in RelA / SpoT proteins ABU16_0737 SM01060 ABU16_0737 ABU16_0740 SM00382 ATPases associated with a variety of cellular activities ABU16_0748 SM00382 ATPases associated with a variety of cellular activities ABU16_0749 SM00382 ATPases associated with a variety of cellular activities ABU16_0756 SM00382 ATPases associated with a variety of cellular activities ABU16_0765 SM00421 helix_turn_helix, Lux Regulon ABU16_0765 SM00448 cheY-homologous receiver domain ABU16_0773 SM00882 Coenzyme A transferase ABU16_0774 SM00882 Coenzyme A transferase ABU16_0782 SM01060 ABU16_0782 ABU16_0786 SM01061 CAT RNA binding domain ABU16_0790 SM00487 DEAD-like helicases superfamily ABU16_0790 SM00490 helicase superfamily c-terminal domain ABU16_0809 SM00860 SMI1 / KNR4 family ABU16_0821 SM00941 Pyrimidine nucleoside phosphorylase C-terminal domain ABU16_0823 SM01133 ABU16_0823 ABU16_0830 SM00382 ATPases associated with a variety of cellular activities ABU16_0832 SM00062 Bacterial periplasmic substrate-binding proteins ABU16_0846 SM00382 ATPases associated with a variety of cellular activities ABU16_0847 SM00387 Histidine kinase-like ATPases ABU16_0848 SM00448 cheY-homologous receiver domain ABU16_0848 SM00862 Transcriptional regulatory protein, C terminal ABU16_0859 SM00420 helix_turn_helix, Deoxyribose operon repressor ABU16_0859 SM01134 ABU16_0859 ABU16_0865 SM00387 Histidine kinase-like ATPases ABU16_0871 SM00558 A domain family that is part of the cupin metalloenzyme superfamily. ABU16_0877 SM00564 beta-propeller repeat ABU16_0884 SM00347 helix_turn_helix multiple antibiotic resistance protein ABU16_0889 SM00345 helix_turn_helix gluconate operon transcriptional repressor ABU16_0889 SM00895 ABU16_0889 ABU16_0892 SM01350 ABU16_0892 ABU16_0897 SM00345 helix_turn_helix gluconate operon transcriptional repressor ABU16_0897 SM00866 ABU16_0897 ABU16_0900 SM00382 ATPases associated with a variety of cellular activities ABU16_0921 SM00091 PAS domain ABU16_0921 SM00382 ATPases associated with a variety of cellular activities ABU16_0922 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain ABU16_0922 SM00387 Histidine kinase-like ATPases ABU16_0922 SM00388 His Kinase A (phosphoacceptor) domain ABU16_0923 SM00448 cheY-homologous receiver domain ABU16_0923 SM00862 Transcriptional regulatory protein, C terminal ABU16_0927 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. ABU16_0928 SM00849 Metallo-beta-lactamase superfamily ABU16_0931 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) ABU16_0931 SM00091 PAS domain ABU16_0931 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain ABU16_0931 SM00387 Histidine kinase-like ATPases ABU16_0931 SM00388 His Kinase A (phosphoacceptor) domain ABU16_0932 SM00448 cheY-homologous receiver domain ABU16_0932 SM00862 Transcriptional regulatory protein, C terminal ABU16_0933 SM00788 Adenylosuccinate synthetase ABU16_0936 SM00382 ATPases associated with a variety of cellular activities ABU16_0943 SM00267 diguanylate cyclase ABU16_0949 SM01131 ABU16_0949 ABU16_0953 SM00422 helix_turn_helix, mercury resistance ABU16_0961 SM00849 Metallo-beta-lactamase superfamily ABU16_0963 SM00347 helix_turn_helix multiple antibiotic resistance protein ABU16_0973 SM01266 ABU16_0973 ABU16_0975 SM00354 helix_turn _helix lactose operon repressor ABU16_0980 SM00926 Molybdopterin oxidoreductase Fe4S4 domain ABU16_0984 SM00470 ParB-like nuclease domain ABU16_0987 SM00470 ParB-like nuclease domain ABU16_0989 SM01228 ABU16_0989 ABU16_0991 SM00322 K homology RNA-binding domain ABU16_0991 SM00393 Putative single-stranded nucleic acids-binding domain ABU16_0991 SM01245 ABU16_0991 ABU16_0994 SM00382 ATPases associated with a variety of cellular activities ABU16_0994 SM00760 Bacterial dnaA protein helix-turn-helix domain ABU16_0995 SM00480 DNA polymerase III beta subunit ABU16_0999 SM00387 Histidine kinase-like ATPases ABU16_0999 SM00433 TopoisomeraseII ABU16_1001 SM00434 DNA Topoisomerase IV ABU16_1003 SM00116 Domain in cystathionine beta-synthase and other proteins. ABU16_1003 SM01240 ABU16_1003 ABU16_1004 SM00936 Penicillin-binding protein 5, C-terminal domain ABU16_1010 SM00257 Lysin motif ABU16_1010 SM00636 ABU16_1010 ABU16_1013 SM00382 ATPases associated with a variety of cellular activities ABU16_1015 SM00493 ABU16_1015 ABU16_1031 SM00966 SpoVT / AbrB like domain ABU16_1034 SM01208 ABU16_1034 ABU16_1035 SM00493 ABU16_1035 ABU16_1036 SM00650 Ribosomal RNA adenine dimethylases ABU16_1046 SM01400 ABU16_1046 ABU16_1050 SM00487 DEAD-like helicases superfamily ABU16_1050 SM00490 helicase superfamily c-terminal domain ABU16_1050 SM00982 ABU16_1050 ABU16_1050 SM01058 CarD-like/TRCF domain ABU16_1051 SM00966 SpoVT / AbrB like domain ABU16_1054 SM00363 S4 RNA-binding domain ABU16_1058 SM00316 Ribosomal protein S1-like RNA-binding domain ABU16_1059 SM00331 Sigma factor PP2C-like phosphatases ABU16_1059 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain ABU16_1061 SM00220 Serine/Threonine protein kinases, catalytic domain ABU16_1062 SM00977 TilS substrate C-terminal domain ABU16_1064 SM00382 ATPases associated with a variety of cellular activities ABU16_1073 SM00905 Dihydroneopterin aldolase ABU16_1075 SM00530 Helix-turn-helix XRE-family like proteins ABU16_1081 SM00382 ATPases associated with a variety of cellular activities ABU16_1081 SM01086 C-terminal, D2-small domain, of ClpB protein ABU16_1082 SM00382 ATPases associated with a variety of cellular activities ABU16_1084 SM00670 Large family of predicted nucleotide-binding domains ABU16_1091 SM00840 ABU16_1091 ABU16_1092 SM00535 Ribonuclease III family ABU16_1093 SM00967 RNA 2'-O ribose methyltransferase substrate binding ABU16_1098 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. ABU16_1098 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. ABU16_1099 SM00649 Ribosomal protein L11/L12 ABU16_1105 SM00663 RNA polymerase I subunit A N-terminus ABU16_1109 SM00838 Elongation factor G C-terminus ABU16_1109 SM00889 Elongation factor G, domain IV ABU16_1112 SM01403 ABU16_1112 ABU16_1116 SM01382 ABU16_1116 ABU16_1116 SM01383 ABU16_1116 ABU16_1118 SM00322 K homology RNA-binding domain ABU16_1122 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. ABU16_1138 SM00662 RNA polymerases D ABU16_1140 SM00382 ATPases associated with a variety of cellular activities ABU16_1141 SM00382 ATPases associated with a variety of cellular activities ABU16_1148 SM00646 ABU16_1148 ABU16_1151 SM01251 ABU16_1151 ABU16_1160 SM00342 helix_turn_helix, arabinose operon control protein ABU16_1176 SM00478 endonuclease III ABU16_1177 SM00342 helix_turn_helix, arabinose operon control protein ABU16_1185 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor ABU16_1188 SM00729 Elongator protein 3, MiaB family, Radical SAM ABU16_1190 SM00382 ATPases associated with a variety of cellular activities ABU16_1195 SM00448 cheY-homologous receiver domain ABU16_1195 SM00862 Transcriptional regulatory protein, C terminal ABU16_1196 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain ABU16_1196 SM00388 His Kinase A (phosphoacceptor) domain ABU16_1211 SM00347 helix_turn_helix multiple antibiotic resistance protein ABU16_1218 SM00342 helix_turn_helix, arabinose operon control protein ABU16_1228 SM00342 helix_turn_helix, arabinose operon control protein ABU16_1229 SM00450 Rhodanese Homology Domain ABU16_1233 SM00345 helix_turn_helix gluconate operon transcriptional repressor ABU16_1233 SM00866 ABU16_1233 ABU16_1241 SM00387 Histidine kinase-like ATPases ABU16_1242 SM00448 cheY-homologous receiver domain ABU16_1243 SM01130 ABU16_1243 ABU16_1246 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain ABU16_1247 SM00345 helix_turn_helix gluconate operon transcriptional repressor ABU16_1247 SM00895 ABU16_1247 ABU16_1248 SM00858 ABU16_1248 ABU16_1253 SM00448 cheY-homologous receiver domain ABU16_1253 SM00862 Transcriptional regulatory protein, C terminal ABU16_1254 SM00387 Histidine kinase-like ATPases ABU16_1254 SM00388 His Kinase A (phosphoacceptor) domain ABU16_1255 SM00382 ATPases associated with a variety of cellular activities ABU16_1260 SM00327 von Willebrand factor (vWF) type A domain ABU16_1269 SM00870 ABU16_1269 ABU16_1273 SM00387 Histidine kinase-like ATPases ABU16_1274 SM00448 cheY-homologous receiver domain ABU16_1274 SM00850 LytTr DNA-binding domain ABU16_1275 SM00382 ATPases associated with a variety of cellular activities ABU16_1282 SM00028 Tetratricopeptide repeats ABU16_1284 SM00642 Alpha-amylase domain ABU16_1286 SM00382 ATPases associated with a variety of cellular activities ABU16_1297 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor ABU16_1298 SM00116 Domain in cystathionine beta-synthase and other proteins. ABU16_1298 SM00382 ATPases associated with a variety of cellular activities ABU16_1304 SM00632 ABU16_1304 ABU16_1304 SM00642 Alpha-amylase domain ABU16_1309 SM00347 helix_turn_helix multiple antibiotic resistance protein ABU16_1332 SM00926 Molybdopterin oxidoreductase Fe4S4 domain ABU16_1338 SM00833 Cobalamin synthesis protein cobW C-terminal domain ABU16_1340 SM00062 Bacterial periplasmic substrate-binding proteins ABU16_1346 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). ABU16_1346 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain ABU16_1348 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family ABU16_1352 SM00823 Phosphopantetheine attachment site ABU16_1352 SM01294 ABU16_1352 ABU16_1353 SM00823 Phosphopantetheine attachment site ABU16_1353 SM01294 ABU16_1353 ABU16_1354 SM00823 Phosphopantetheine attachment site ABU16_1359 SM00345 helix_turn_helix gluconate operon transcriptional repressor ABU16_1362 SM00382 ATPases associated with a variety of cellular activities ABU16_1364 SM00062 Bacterial periplasmic substrate-binding proteins ABU16_1372 SM00710 Parallel beta-helix repeats ABU16_1372 SM00722 Domain present in carbohydrate binding proteins and sugar hydrolses ABU16_1377 SM00382 ATPases associated with a variety of cellular activities ABU16_1379 SM00448 cheY-homologous receiver domain ABU16_1379 SM00862 Transcriptional regulatory protein, C terminal ABU16_1380 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain ABU16_1380 SM00387 Histidine kinase-like ATPases ABU16_1380 SM00388 His Kinase A (phosphoacceptor) domain ABU16_1381 SM00028 Tetratricopeptide repeats ABU16_1388 SM00382 ATPases associated with a variety of cellular activities ABU16_1394 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor ABU16_1395 SM00345 helix_turn_helix gluconate operon transcriptional repressor ABU16_1402 SM00420 helix_turn_helix, Deoxyribose operon repressor ABU16_1407 SM01329 ABU16_1407 ABU16_1416 SM00796 Allophanate hydrolase subunit 1 ABU16_1417 SM00797 Allophanate hydrolase subunit 2 ABU16_1418 SM00346 helix_turn_helix isocitrate lyase regulation ABU16_1435 SM00344 helix_turn_helix ASNC type ABU16_1436 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain ABU16_1436 SM00437 Bacterial DNA topoisomerase I DNA-binding domain ABU16_1436 SM00493 ABU16_1436 ABU16_1438 SM00267 diguanylate cyclase ABU16_1456 SM00091 PAS domain ABU16_1456 SM00387 Histidine kinase-like ATPases ABU16_1457 SM00448 cheY-homologous receiver domain ABU16_1461 SM00382 ATPases associated with a variety of cellular activities ABU16_1471 SM00487 DEAD-like helicases superfamily ABU16_1471 SM00490 helicase superfamily c-terminal domain ABU16_1477 SM01005 Alanine racemase, C-terminal domain ABU16_1482 SM00387 Histidine kinase-like ATPases ABU16_1483 SM00331 Sigma factor PP2C-like phosphatases ABU16_1487 SM00331 Sigma factor PP2C-like phosphatases ABU16_1487 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain ABU16_1492 SM00347 helix_turn_helix multiple antibiotic resistance protein ABU16_1493 SM00316 Ribosomal protein S1-like RNA-binding domain ABU16_1493 SM00732 Likely ribonuclease with RNase H fold. ABU16_1495 SM00731 SprT homologues. ABU16_1497 SM00344 helix_turn_helix ASNC type ABU16_1498 SM00344 helix_turn_helix ASNC type ABU16_1506 SM00357 Cold shock protein domain ABU16_1507 SM01058 CarD-like/TRCF domain ABU16_1510 SM00342 helix_turn_helix, arabinose operon control protein ABU16_1512 SM00342 helix_turn_helix, arabinose operon control protein ABU16_1512 SM00871 Bacterial transcription activator, effector binding domain ABU16_1513 SM00345 helix_turn_helix gluconate operon transcriptional repressor ABU16_1520 SM00345 helix_turn_helix gluconate operon transcriptional repressor ABU16_1530 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor ABU16_1535 SM00345 helix_turn_helix gluconate operon transcriptional repressor ABU16_1537 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor ABU16_1540 SM00387 Histidine kinase-like ATPases ABU16_1541 SM00421 helix_turn_helix, Lux Regulon ABU16_1541 SM00448 cheY-homologous receiver domain ABU16_1546 SM00422 helix_turn_helix, mercury resistance ABU16_1546 SM00871 Bacterial transcription activator, effector binding domain ABU16_1566 SM00382 ATPases associated with a variety of cellular activities ABU16_1570 SM00347 helix_turn_helix multiple antibiotic resistance protein ABU16_1573 SM00347 helix_turn_helix multiple antibiotic resistance protein ABU16_1573 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor ABU16_1576 SM00345 helix_turn_helix gluconate operon transcriptional repressor ABU16_1576 SM00895 ABU16_1576 ABU16_1577 SM00257 Lysin motif ABU16_1577 SM00636 ABU16_1577 ABU16_1580 SM00098 Alkaline phosphatase homologues ABU16_1584 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. ABU16_1592 SM00345 helix_turn_helix gluconate operon transcriptional repressor ABU16_1592 SM00866 ABU16_1592 ABU16_1602 SM00382 ATPases associated with a variety of cellular activities ABU16_1604 SM00881 CoA binding domain ABU16_1609 SM00883 Chaperonin 10 Kd subunit ABU16_1622 SM00028 Tetratricopeptide repeats ABU16_1622 SM00382 ATPases associated with a variety of cellular activities ABU16_1623 SM00829 Enoylreductase ABU16_1633 SM00829 Enoylreductase ABU16_1645 SM00460 Transglutaminase/protease-like homologues ABU16_1653 SM01001 AIR carboxylase ABU16_1655 SM00998 Adenylosuccinate lyase C-terminus ABU16_1658 SM01211 ABU16_1658 ABU16_1663 SM00798 AICARFT/IMPCHase bienzyme ABU16_1663 SM00851 MGS-like domain ABU16_1664 SM01209 ABU16_1664 ABU16_1664 SM01210 ABU16_1664 ABU16_1665 SM00344 helix_turn_helix ASNC type ABU16_1675 SM00278 Helix-hairpin-helix DNA-binding motif class 1 ABU16_1675 SM00292 breast cancer carboxy-terminal domain ABU16_1675 SM00532 Ligase N family ABU16_1682 SM00845 GatB domain ABU16_1685 SM00046 Diacylglycerol kinase catalytic domain (presumed) ABU16_1690 SM00487 DEAD-like helicases superfamily ABU16_1691 SM00974 ABU16_1691 ABU16_1699 SM00028 Tetratricopeptide repeats ABU16_1714 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain ABU16_1714 SM00387 Histidine kinase-like ATPases ABU16_1715 SM00342 helix_turn_helix, arabinose operon control protein ABU16_1715 SM00448 cheY-homologous receiver domain ABU16_1737 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). ABU16_1738 SM00382 ATPases associated with a variety of cellular activities ABU16_1740 SM00422 helix_turn_helix, mercury resistance ABU16_1744 SM00382 ATPases associated with a variety of cellular activities ABU16_1745 SM00487 DEAD-like helicases superfamily ABU16_1745 SM00490 helicase superfamily c-terminal domain ABU16_1747 SM00829 Enoylreductase ABU16_1752 SM00382 ATPases associated with a variety of cellular activities ABU16_1758 SM00656 ABU16_1758 ABU16_1760 SM00387 Histidine kinase-like ATPases ABU16_1761 SM00448 cheY-homologous receiver domain ABU16_1765 SM00849 Metallo-beta-lactamase superfamily ABU16_1782 SM00642 Alpha-amylase domain ABU16_1783 SM00345 helix_turn_helix gluconate operon transcriptional repressor ABU16_1783 SM00866 ABU16_1783 ABU16_1790 SM00226 Low molecular weight phosphatase family ABU16_1803 SM00478 endonuclease III ABU16_1809 SM00861 Transketolase, pyrimidine binding domain ABU16_1812 SM00382 ATPases associated with a variety of cellular activities ABU16_1823 SM00382 ATPases associated with a variety of cellular activities ABU16_1824 SM00382 ATPases associated with a variety of cellular activities ABU16_1827 SM00342 helix_turn_helix, arabinose operon control protein ABU16_1832 SM00387 Histidine kinase-like ATPases ABU16_1833 SM00421 helix_turn_helix, Lux Regulon ABU16_1833 SM00448 cheY-homologous receiver domain ABU16_1835 SM00382 ATPases associated with a variety of cellular activities ABU16_1845 SM00347 helix_turn_helix multiple antibiotic resistance protein ABU16_1860 SM00287 Bacterial SH3 domain homologues ABU16_1867 SM00478 endonuclease III ABU16_1867 SM00525 ABU16_1867 ABU16_1873 SM00382 ATPases associated with a variety of cellular activities ABU16_1888 SM01060 ABU16_1888 ABU16_1889 SM00382 ATPases associated with a variety of cellular activities ABU16_1890 SM00062 Bacterial periplasmic substrate-binding proteins ABU16_1896 SM00530 Helix-turn-helix XRE-family like proteins ABU16_1898 SM00567 E-Z type HEAT repeats ABU16_1905 SM00763 PrkA AAA domain ABU16_1907 SM00347 helix_turn_helix multiple antibiotic resistance protein ABU16_1914 SM00345 helix_turn_helix gluconate operon transcriptional repressor ABU16_1915 SM00382 ATPases associated with a variety of cellular activities ABU16_1916 SM00382 ATPases associated with a variety of cellular activities ABU16_1918 SM00357 Cold shock protein domain ABU16_1920 SM00267 diguanylate cyclase ABU16_1925 SM00318 Staphylococcal nuclease homologues ABU16_1927 SM00363 S4 RNA-binding domain ABU16_1929 SM00116 Domain in cystathionine beta-synthase and other proteins. ABU16_1939 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. ABU16_1939 SM00387 Histidine kinase-like ATPases ABU16_1940 SM00421 helix_turn_helix, Lux Regulon ABU16_1940 SM00448 cheY-homologous receiver domain ABU16_1944 SM00257 Lysin motif ABU16_1948 SM00098 Alkaline phosphatase homologues ABU16_1949 SM00257 Lysin motif ABU16_1955 SM00345 helix_turn_helix gluconate operon transcriptional repressor ABU16_1961 SM00563 Phosphate acyltransferases ABU16_1962 SM01091 Transporter associated domain ABU16_1963 SM00422 helix_turn_helix, mercury resistance ABU16_1966 SM01091 Transporter associated domain ABU16_1978 SM00382 ATPases associated with a variety of cellular activities ABU16_1979 SM00382 ATPases associated with a variety of cellular activities ABU16_1990 SM00729 Elongator protein 3, MiaB family, Radical SAM ABU16_1996 SM00382 ATPases associated with a variety of cellular activities ABU16_2000 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. ABU16_2006 SM00347 helix_turn_helix multiple antibiotic resistance protein ABU16_2012 SM00382 ATPases associated with a variety of cellular activities ABU16_2029 SM01022 ABU16_2029 ABU16_2032 SM00849 Metallo-beta-lactamase superfamily ABU16_2041 SM00829 Enoylreductase ABU16_2044 SM00855 Phosphoglycerate mutase family ABU16_2048 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). ABU16_2051 SM00914 ABU16_2051 ABU16_2055 SM00894 Excalibur calcium-binding domain ABU16_2062 SM00347 helix_turn_helix multiple antibiotic resistance protein ABU16_2067 SM00354 helix_turn _helix lactose operon repressor ABU16_2095 SM00342 helix_turn_helix, arabinose operon control protein ABU16_2096 SM00354 helix_turn _helix lactose operon repressor ABU16_2100 SM00345 helix_turn_helix gluconate operon transcriptional repressor ABU16_2109 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain ABU16_2116 SM00316 Ribosomal protein S1-like RNA-binding domain ABU16_2118 SM00752 Horizontally Transferred TransMembrane Domain ABU16_2134 SM00859 Semialdehyde dehydrogenase, NAD binding domain ABU16_2138 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain ABU16_2139 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain ABU16_2150 SM00825 Beta-ketoacyl synthase ABU16_2152 SM00382 ATPases associated with a variety of cellular activities ABU16_2153 SM00382 ATPases associated with a variety of cellular activities ABU16_2174 SM01118 ABU16_2174 ABU16_2176 SM00954 Region found in RelA / SpoT proteins ABU16_2226 SM00635 Bacterial Ig-like domain 2 ABU16_2245 SM00926 Molybdopterin oxidoreductase Fe4S4 domain ABU16_2245 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region ABU16_2255 SM00382 ATPases associated with a variety of cellular activities ABU16_2257 SM00835 Cupin ABU16_2264 SM00829 Enoylreductase ABU16_2268 SM00354 helix_turn _helix lactose operon repressor ABU16_2270 SM00858 ABU16_2270 ABU16_2273 SM00382 ATPases associated with a variety of cellular activities ABU16_2274 SM00028 Tetratricopeptide repeats ABU16_2277 SM00257 Lysin motif ABU16_2277 SM00644 ABU16_2277 ABU16_2282 SM00530 Helix-turn-helix XRE-family like proteins ABU16_2286 SM00382 ATPases associated with a variety of cellular activities ABU16_2305 SM00257 Lysin motif ABU16_2318 SM00257 Lysin motif ABU16_2318 SM00644 ABU16_2318 ABU16_2329 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. ABU16_2334 SM00382 ATPases associated with a variety of cellular activities ABU16_2338 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain ABU16_2340 SM00382 ATPases associated with a variety of cellular activities ABU16_2352 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase ABU16_2355 SM00347 helix_turn_helix multiple antibiotic resistance protein ABU16_2365 SM00382 ATPases associated with a variety of cellular activities ABU16_2368 SM00448 cheY-homologous receiver domain ABU16_2368 SM00862 Transcriptional regulatory protein, C terminal ABU16_2369 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain ABU16_2369 SM00387 Histidine kinase-like ATPases ABU16_2369 SM00388 His Kinase A (phosphoacceptor) domain ABU16_2373 SM00116 Domain in cystathionine beta-synthase and other proteins. ABU16_2373 SM00924 MgtE intracellular N domain ABU16_2374 SM00422 helix_turn_helix, mercury resistance ABU16_2377 SM00347 helix_turn_helix multiple antibiotic resistance protein ABU16_2384 SM00559 Ku70 and Ku80 are 70kDa and 80kDa subunits of the Lupus Ku autoantigen ABU16_2385 SM00052 Putative diguanylate phosphodiesterase ABU16_2385 SM00267 diguanylate cyclase ABU16_2398 SM00091 PAS domain ABU16_2398 SM00387 Histidine kinase-like ATPases ABU16_2398 SM00388 His Kinase A (phosphoacceptor) domain ABU16_2407 SM01007 Class II Aldolase and Adducin N-terminal domain ABU16_2412 SM00387 Histidine kinase-like ATPases ABU16_2412 SM00388 His Kinase A (phosphoacceptor) domain ABU16_2413 SM00347 helix_turn_helix multiple antibiotic resistance protein ABU16_2416 SM00382 ATPases associated with a variety of cellular activities ABU16_2416 SM01086 C-terminal, D2-small domain, of ClpB protein ABU16_2424 SM00822 ABU16_2424 ABU16_2425 SM00257 Lysin motif ABU16_2426 SM00257 Lysin motif ABU16_2427 SM00636 ABU16_2427 ABU16_2441 SM00354 helix_turn _helix lactose operon repressor ABU16_2442 SM01061 CAT RNA binding domain ABU16_2449 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). ABU16_2449 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain ABU16_2453 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) ABU16_2453 SM00091 PAS domain ABU16_2453 SM00387 Histidine kinase-like ATPases ABU16_2453 SM00388 His Kinase A (phosphoacceptor) domain ABU16_2456 SM00260 Two component signalling adaptor domain ABU16_2456 SM00448 cheY-homologous receiver domain ABU16_2459 SM00257 Lysin motif ABU16_2465 SM00052 Putative diguanylate phosphodiesterase ABU16_2485 SM00852 Probable molybdopterin binding domain ABU16_2489 SM00382 ATPases associated with a variety of cellular activities ABU16_2490 SM00382 ATPases associated with a variety of cellular activities ABU16_2493 SM00382 ATPases associated with a variety of cellular activities ABU16_2494 SM01066 Carbohydrate binding domain ABU16_2495 SM00420 helix_turn_helix, Deoxyribose operon repressor ABU16_2495 SM01134 ABU16_2495 ABU16_2500 SM00382 ATPases associated with a variety of cellular activities ABU16_2505 SM00966 SpoVT / AbrB like domain ABU16_2506 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) ABU16_2506 SM00091 PAS domain ABU16_2506 SM00387 Histidine kinase-like ATPases ABU16_2506 SM00388 His Kinase A (phosphoacceptor) domain ABU16_2510 SM00849 Metallo-beta-lactamase superfamily ABU16_2518 SM00861 Transketolase, pyrimidine binding domain ABU16_2539 SM00838 Elongation factor G C-terminus ABU16_2543 SM00670 Large family of predicted nucleotide-binding domains ABU16_2549 SM00878 Biotin carboxylase C-terminal domain ABU16_2560 SM00116 Domain in cystathionine beta-synthase and other proteins. ABU16_2570 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. ABU16_2582 SM00740 ABU16_2582 ABU16_2583 SM00740 ABU16_2583 ABU16_2594 SM00842 Cell division protein FtsA ABU16_2595 SM00864 Tubulin/FtsZ family, GTPase domain ABU16_2595 SM00865 Tubulin/FtsZ family, C-terminal domain ABU16_2600 SM00382 ATPases associated with a variety of cellular activities ABU16_2607 SM00363 S4 RNA-binding domain ABU16_2613 SM00363 S4 RNA-binding domain ABU16_2618 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain ABU16_2619 SM00851 MGS-like domain ABU16_2619 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain ABU16_2619 SM01209 ABU16_2619 ABU16_2622 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family ABU16_2632 SM00831 Cation transporter/ATPase, N-terminus ABU16_2635 SM00072 Guanylate kinase homologues. ABU16_2636 SM01409 ABU16_2636 ABU16_2638 SM00487 DEAD-like helicases superfamily ABU16_2638 SM00490 helicase superfamily c-terminal domain ABU16_2643 SM00331 Sigma factor PP2C-like phosphatases ABU16_2643 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain ABU16_2644 SM00220 Serine/Threonine protein kinases, catalytic domain ABU16_2644 SM00740 ABU16_2644 ABU16_2647 SM00983 Thiamin pyrophosphokinase, vitamin B1 binding domain ABU16_2650 SM01120 ABU16_2650 ABU16_2650 SM01121 ABU16_2650 ABU16_2653 SM00487 DEAD-like helicases superfamily ABU16_2653 SM00490 helicase superfamily c-terminal domain ABU16_2656 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. ABU16_2657 SM00822 ABU16_2657 ABU16_2659 SM00358 Double-stranded RNA binding motif ABU16_2659 SM00535 Ribonuclease III family ABU16_2660 SM00968 SMC proteins Flexible Hinge Domain ABU16_2661 SM00382 ATPases associated with a variety of cellular activities ABU16_2661 SM00962 SRP54-type protein, GTPase domain ABU16_2661 SM00963 SRP54-type protein, helical bundle domain ABU16_2664 SM00382 ATPases associated with a variety of cellular activities ABU16_2664 SM00962 SRP54-type protein, GTPase domain ABU16_2664 SM00963 SRP54-type protein, helical bundle domain ABU16_2676 SM00881 CoA binding domain ABU16_2678 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain ABU16_2678 SM00437 Bacterial DNA topoisomerase I DNA-binding domain ABU16_2678 SM00493 ABU16_2678 ABU16_2682 SM00382 ATPases associated with a variety of cellular activities ABU16_2682 SM01086 C-terminal, D2-small domain, of ClpB protein ABU16_2690 SM00382 ATPases associated with a variety of cellular activities ABU16_2700 SM00448 cheY-homologous receiver domain ABU16_2707 SM00962 SRP54-type protein, GTPase domain ABU16_2709 SM00448 cheY-homologous receiver domain ABU16_2710 SM00073 Histidine Phosphotransfer domain ABU16_2710 SM00260 Two component signalling adaptor domain ABU16_2710 SM00387 Histidine kinase-like ATPases ABU16_2710 SM01231 ABU16_2710 ABU16_2711 SM00260 Two component signalling adaptor domain ABU16_2723 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. ABU16_2725 SM00479 ABU16_2725 ABU16_2725 SM00481 DNA polymerase alpha chain like domain ABU16_2727 SM00316 Ribosomal protein S1-like RNA-binding domain ABU16_2727 SM00322 K homology RNA-binding domain ABU16_2734 SM00904 Riboflavin kinase ABU16_2735 SM00316 Ribosomal protein S1-like RNA-binding domain ABU16_2735 SM00322 K homology RNA-binding domain ABU16_2742 SM00859 Semialdehyde dehydrogenase, NAD binding domain ABU16_2744 SM01130 ABU16_2744 ABU16_2745 SM00849 Metallo-beta-lactamase superfamily ABU16_2748 SM00382 ATPases associated with a variety of cellular activities ABU16_2748 SM00843 ABU16_2748 ABU16_2749 SM00345 helix_turn_helix gluconate operon transcriptional repressor ABU16_2749 SM00866 ABU16_2749 ABU16_2757 SM00530 Helix-turn-helix XRE-family like proteins ABU16_2759 SM00852 Probable molybdopterin binding domain ABU16_2760 SM00382 ATPases associated with a variety of cellular activities ABU16_2762 SM00322 K homology RNA-binding domain ABU16_2762 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. ABU16_2765 SM00829 Enoylreductase ABU16_2767 SM00729 Elongator protein 3, MiaB family, Radical SAM ABU16_2770 SM00533 DNA-binding domain of DNA mismatch repair MUTS family ABU16_2770 SM00534 ATPase domain of DNA mismatch repair MUTS family ABU16_2771 SM00853 MutL C terminal dimerisation domain ABU16_2771 SM01340 ABU16_2771 ABU16_2776 SM00849 Metallo-beta-lactamase superfamily ABU16_2777 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. ABU16_2779 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. ABU16_2780 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. ABU16_2782 SM00825 Beta-ketoacyl synthase ABU16_2786 SM00822 ABU16_2786 ABU16_2786 SM00823 Phosphopantetheine attachment site ABU16_2786 SM00825 Beta-ketoacyl synthase ABU16_2786 SM00826 ABU16_2786 ABU16_2786 SM01294 ABU16_2786 ABU16_2787 SM00822 ABU16_2787 ABU16_2787 SM00823 Phosphopantetheine attachment site ABU16_2787 SM00825 Beta-ketoacyl synthase ABU16_2787 SM00826 ABU16_2787 ABU16_2787 SM01294 ABU16_2787 ABU16_2788 SM00822 ABU16_2788 ABU16_2788 SM00823 Phosphopantetheine attachment site ABU16_2788 SM00825 Beta-ketoacyl synthase ABU16_2788 SM00826 ABU16_2788 ABU16_2788 SM01294 ABU16_2788 ABU16_2789 SM00822 ABU16_2789 ABU16_2789 SM00823 Phosphopantetheine attachment site ABU16_2789 SM00825 Beta-ketoacyl synthase ABU16_2789 SM00826 ABU16_2789 ABU16_2789 SM01294 ABU16_2789 ABU16_2790 SM00823 Phosphopantetheine attachment site ABU16_2790 SM00825 Beta-ketoacyl synthase ABU16_2790 SM01294 ABU16_2790 ABU16_2793 SM00849 Metallo-beta-lactamase superfamily ABU16_2810 SM00646 ABU16_2810 ABU16_2812 SM00382 ATPases associated with a variety of cellular activities ABU16_2815 SM00422 helix_turn_helix, mercury resistance ABU16_2816 SM01230 ABU16_2816 ABU16_2819 SM00860 SMI1 / KNR4 family ABU16_2834 SM00318 Staphylococcal nuclease homologues ABU16_2836 SM01005 Alanine racemase, C-terminal domain ABU16_2863 SM00257 Lysin motif ABU16_2864 SM00857 Resolvase, N terminal domain ABU16_2866 SM00861 Transketolase, pyrimidine binding domain ABU16_2871 SM00448 cheY-homologous receiver domain ABU16_2885 SM01207 ABU16_2885 ABU16_2886 SM00881 CoA binding domain ABU16_2887 SM00387 Histidine kinase-like ATPases ABU16_2887 SM00433 TopoisomeraseII ABU16_2888 SM00434 DNA Topoisomerase IV ABU16_2893 SM01067 Cellulose binding domain ABU16_2896 SM00606 Cellulose Binding Domain Type IV ABU16_2905 SM00878 Biotin carboxylase C-terminal domain ABU16_2911 SM00823 Phosphopantetheine attachment site ABU16_2911 SM00824 Thioesterase ABU16_2912 SM00823 Phosphopantetheine attachment site ABU16_2913 SM00823 Phosphopantetheine attachment site ABU16_2913 SM01294 ABU16_2913 ABU16_2914 SM00823 Phosphopantetheine attachment site ABU16_2915 SM00823 Phosphopantetheine attachment site ABU16_2924 SM00829 Enoylreductase ABU16_2928 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase ABU16_2931 SM00822 ABU16_2931 ABU16_2938 SM00926 Molybdopterin oxidoreductase Fe4S4 domain ABU16_2943 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). ABU16_2943 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain ABU16_2948 SM00656 ABU16_2948 ABU16_2951 SM00835 Cupin ABU16_2958 SM00530 Helix-turn-helix XRE-family like proteins ABU16_2988 SM00860 SMI1 / KNR4 family ABU16_2990 SM00860 SMI1 / KNR4 family ABU16_2992 SM00710 Parallel beta-helix repeats ABU16_2994 SM00342 helix_turn_helix, arabinose operon control protein ABU16_2997 SM00849 Metallo-beta-lactamase superfamily ABU16_2998 SM00871 Bacterial transcription activator, effector binding domain ABU16_3001 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor ABU16_3010 SM00421 helix_turn_helix, Lux Regulon ABU16_3010 SM00448 cheY-homologous receiver domain ABU16_3011 SM00257 Lysin motif ABU16_3012 SM00341 Helicase and RNase D C-terminal ABU16_3012 SM00487 DEAD-like helicases superfamily ABU16_3012 SM00490 helicase superfamily c-terminal domain ABU16_3012 SM00956 ABU16_3012 ABU16_3031 SM00861 Transketolase, pyrimidine binding domain ABU16_3032 SM00327 von Willebrand factor (vWF) type A domain ABU16_3033 SM00382 ATPases associated with a variety of cellular activities ABU16_3035 SM00257 Lysin motif ABU16_3055 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. ABU16_3055 SM00245 tail specific protease ABU16_3063 SM00014 Acid phosphatase homologues ABU16_3072 SM00882 Coenzyme A transferase ABU16_3073 SM00882 Coenzyme A transferase ABU16_3086 SM00347 helix_turn_helix multiple antibiotic resistance protein ABU16_3094 SM00382 ATPases associated with a variety of cellular activities ABU16_3104 SM00567 E-Z type HEAT repeats ABU16_3104 SM00932 Scaffold protein Nfu/NifU N terminal ABU16_3105 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. ABU16_3109 SM00357 Cold shock protein domain ABU16_3117 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs ABU16_3117 SM00475 5'-3' exonuclease ABU16_3130 SM00354 helix_turn _helix lactose operon repressor ABU16_3133 SM00491 ABU16_3133 ABU16_3135 SM00981 ABU16_3135 ABU16_3140 SM00487 DEAD-like helicases superfamily ABU16_3140 SM00490 helicase superfamily c-terminal domain ABU16_3152 SM00478 endonuclease III ABU16_3152 SM00525 ABU16_3152 ABU16_3158 SM00479 ABU16_3158 ABU16_3158 SM00487 DEAD-like helicases superfamily ABU16_3158 SM00491 ABU16_3158 ABU16_3166 SM00851 MGS-like domain ABU16_3176 SM00914 ABU16_3176 ABU16_3177 SM00028 Tetratricopeptide repeats ABU16_3192 SM00138 Methyltransferase, chemotaxis proteins ABU16_3194 SM00562 ABU16_3194 ABU16_3200 SM00411 bacterial (prokaryotic) histone like domain ABU16_3210 SM01240 ABU16_3210 ABU16_3211 SM00316 Ribosomal protein S1-like RNA-binding domain ABU16_3219 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase ABU16_3224 SM00257 Lysin motif ABU16_3226 SM00487 DEAD-like helicases superfamily ABU16_3226 SM00490 helicase superfamily c-terminal domain ABU16_3235 SM00091 PAS domain ABU16_3235 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain ABU16_3235 SM00387 Histidine kinase-like ATPases ABU16_3235 SM00388 His Kinase A (phosphoacceptor) domain ABU16_3236 SM00448 cheY-homologous receiver domain ABU16_3236 SM00862 Transcriptional regulatory protein, C terminal ABU16_3241 SM00363 S4 RNA-binding domain ABU16_3244 SM00936 Penicillin-binding protein 5, C-terminal domain ABU16_3273 SM00387 Histidine kinase-like ATPases ABU16_3275 SM00936 Penicillin-binding protein 5, C-terminal domain ABU16_3284 SM00919 Malic enzyme, NAD binding domain ABU16_3284 SM01274 ABU16_3284 ABU16_3287 SM00870 ABU16_3287 ABU16_3288 SM00530 Helix-turn-helix XRE-family like proteins ABU16_3311 SM00849 Metallo-beta-lactamase superfamily ABU16_3317 SM00849 Metallo-beta-lactamase superfamily ABU16_3319 SM01350 ABU16_3319 ABU16_3330 SM00382 ATPases associated with a variety of cellular activities ABU16_3332 SM00062 Bacterial periplasmic substrate-binding proteins ABU16_3332 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. ABU16_3334 SM00046 Diacylglycerol kinase catalytic domain (presumed) ABU16_3336 SM00422 helix_turn_helix, mercury resistance ABU16_3338 SM00861 Transketolase, pyrimidine binding domain ABU16_3342 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase ABU16_3344 SM00091 PAS domain ABU16_3344 SM00382 ATPases associated with a variety of cellular activities ABU16_3353 SM00646 ABU16_3353 ABU16_3357 SM00448 cheY-homologous receiver domain ABU16_3359 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. ABU16_3362 SM00363 S4 RNA-binding domain ABU16_3363 SM00861 Transketolase, pyrimidine binding domain ABU16_3370 SM00878 Biotin carboxylase C-terminal domain ABU16_3379 SM00382 ATPases associated with a variety of cellular activities ABU16_3381 SM00841 Elongation factor P, C-terminal ABU16_3381 SM01185 ABU16_3381 ABU16_3388 SM00529 Helix-turn-helix diphteria tox regulatory element ABU16_3390 SM00450 Rhodanese Homology Domain ABU16_3394 SM00487 DEAD-like helicases superfamily ABU16_3394 SM00490 helicase superfamily c-terminal domain ABU16_3397 SM00530 Helix-turn-helix XRE-family like proteins ABU16_3409 SM00382 ATPases associated with a variety of cellular activities ABU16_3412 SM01091 Transporter associated domain ABU16_3416 SM00849 Metallo-beta-lactamase superfamily ABU16_3420 SM00631 ABU16_3420 ABU16_3424 SM00028 Tetratricopeptide repeats ABU16_3434 SM00382 ATPases associated with a variety of cellular activities ABU16_3435 SM00382 ATPases associated with a variety of cellular activities ABU16_3444 SM00257 Lysin motif ABU16_3451 SM00518 AP endonuclease family 2 ABU16_3452 SM00487 DEAD-like helicases superfamily ABU16_3452 SM00490 helicase superfamily c-terminal domain ABU16_3460 SM00400 zinc finger ABU16_3460 SM00493 ABU16_3460 ABU16_3463 SM00116 Domain in cystathionine beta-synthase and other proteins. ABU16_3472 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. ABU16_3482 SM00729 Elongator protein 3, MiaB family, Radical SAM ABU16_3485 SM00271 DnaJ molecular chaperone homology domain ABU16_3489 SM00729 Elongator protein 3, MiaB family, Radical SAM ABU16_3490 SM00838 Elongation factor G C-terminus ABU16_3498 SM00849 Metallo-beta-lactamase superfamily ABU16_3500 SM00278 Helix-hairpin-helix DNA-binding motif class 1 ABU16_3504 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. ABU16_3506 SM01103 ABU16_3506 ABU16_3512 SM00644 ABU16_3512 ABU16_3514 SM01350 ABU16_3514 ABU16_3518 SM00857 Resolvase, N terminal domain ABU16_3519 SM00226 Low molecular weight phosphatase family ABU16_3522 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor ABU16_3524 SM00028 Tetratricopeptide repeats ABU16_3531 SM00644 ABU16_3531 ABU16_3542 SM00257 Lysin motif ABU16_3568 SM00382 ATPases associated with a variety of cellular activities ABU16_3576 SM00530 Helix-turn-helix XRE-family like proteins ABU16_3577 SM00530 Helix-turn-helix XRE-family like proteins ABU16_3584 SM00388 His Kinase A (phosphoacceptor) domain ABU16_3585 SM00448 cheY-homologous receiver domain ABU16_3585 SM00862 Transcriptional regulatory protein, C terminal ABU16_3593 SM00450 Rhodanese Homology Domain ABU16_3593 SM00849 Metallo-beta-lactamase superfamily ABU16_3594 SM00450 Rhodanese Homology Domain ABU16_3599 SM00422 helix_turn_helix, mercury resistance ABU16_3602 SM01091 Transporter associated domain ABU16_3613 SM00344 helix_turn_helix ASNC type ABU16_3635 SM00287 Bacterial SH3 domain homologues ABU16_3643 SM00422 helix_turn_helix, mercury resistance ABU16_3645 SM00829 Enoylreductase ABU16_3647 SM00640 Glycosyl hydrolases family 32 ABU16_3652 SM00382 ATPases associated with a variety of cellular activities ABU16_3668 SM00926 Molybdopterin oxidoreductase Fe4S4 domain ABU16_3668 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region ABU16_3674 SM00650 Ribosomal RNA adenine dimethylases ABU16_3683 SM00257 Lysin motif ABU16_3683 SM00644 ABU16_3683 ABU16_3688 SM00710 Parallel beta-helix repeats ABU16_3689 SM00047 Lysozyme subfamily 2 ABU16_3735 SM00530 Helix-turn-helix XRE-family like proteins ABU16_3744 SM00732 Likely ribonuclease with RNase H fold. ABU16_3746 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain ABU16_3748 SM00382 ATPases associated with a variety of cellular activities ABU16_3749 SM00062 Bacterial periplasmic substrate-binding proteins ABU16_3749 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. ABU16_3755 SM00382 ATPases associated with a variety of cellular activities ABU16_3756 SM00028 Tetratricopeptide repeats ABU16_3760 SM00382 ATPases associated with a variety of cellular activities ABU16_3766 SM00287 Bacterial SH3 domain homologues ABU16_3766 SM00646 ABU16_3766 ABU16_3768 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. ABU16_3768 SM00954 Region found in RelA / SpoT proteins ABU16_3779 SM01323 ABU16_3779 ABU16_3783 SM00382 ATPases associated with a variety of cellular activities ABU16_3784 SM00278 Helix-hairpin-helix DNA-binding motif class 1 ABU16_3795 SM00257 Lysin motif ABU16_3804 SM01317 ABU16_3804 ABU16_3825 SM00257 Lysin motif ABU16_3827 SM01004 Delta-aminolevulinic acid dehydratase ABU16_3834 SM00382 ATPases associated with a variety of cellular activities ABU16_3834 SM00464 Found in ATP-dependent protease La (LON) ABU16_3835 SM00382 ATPases associated with a variety of cellular activities ABU16_3836 SM00382 ATPases associated with a variety of cellular activities ABU16_3836 SM00994 ClpX C4-type zinc finger ABU16_3836 SM01086 C-terminal, D2-small domain, of ClpB protein ABU16_3842 SM01329 ABU16_3842 ABU16_3843 SM00917 LeuA allosteric (dimerisation) domain ABU16_3854 SM00909 Sporulation and spore germination ABU16_3856 SM00347 helix_turn_helix multiple antibiotic resistance protein ABU16_3858 SM00421 helix_turn_helix, Lux Regulon ABU16_3866 SM00465 GIY-YIG type nucleases (URI domain) ABU16_3870 SM00813 Alpha-L-arabinofuranosidase C-terminus ABU16_3871 SM00893 Electron transfer flavoprotein domain ABU16_3872 SM00893 Electron transfer flavoprotein domain ABU16_3877 SM00463 Small MutS-related domain ABU16_3877 SM00533 DNA-binding domain of DNA mismatch repair MUTS family ABU16_3877 SM00534 ATPase domain of DNA mismatch repair MUTS family ABU16_3878 SM00278 Helix-hairpin-helix DNA-binding motif class 1 ABU16_3878 SM00481 DNA polymerase alpha chain like domain ABU16_3878 SM00483 DNA polymerase X family ABU16_3882 SM00873 B3/4 domain ABU16_3882 SM00874 tRNA synthetase B5 domain ABU16_3882 SM00896 Ferredoxin-fold anticodon binding domain ABU16_3885 SM00967 RNA 2'-O ribose methyltransferase substrate binding ABU16_3892 SM00813 Alpha-L-arabinofuranosidase C-terminus ABU16_3898 SM01007 Class II Aldolase and Adducin N-terminal domain ABU16_3912 SM00448 cheY-homologous receiver domain ABU16_3912 SM00850 LytTr DNA-binding domain ABU16_3913 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. ABU16_3913 SM00387 Histidine kinase-like ATPases ABU16_3915 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain ABU16_3919 SM00382 ATPases associated with a variety of cellular activities ABU16_3923 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain ABU16_3929 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain ABU16_3929 SM01232 ABU16_3929 ABU16_3930 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs ABU16_3930 SM00474 3'-5' exonuclease ABU16_3930 SM00475 5'-3' exonuclease ABU16_3930 SM00482 DNA polymerase A domain ABU16_3931 SM00091 PAS domain ABU16_3931 SM00387 Histidine kinase-like ATPases ABU16_3931 SM00388 His Kinase A (phosphoacceptor) domain ABU16_3932 SM00448 cheY-homologous receiver domain ABU16_3932 SM00862 Transcriptional regulatory protein, C terminal ABU16_3935 SM01329 ABU16_3935 ABU16_3944 SM00919 Malic enzyme, NAD binding domain ABU16_3944 SM01274 ABU16_3944 ABU16_3945 SM00481 DNA polymerase alpha chain like domain ABU16_3952 SM00116 Domain in cystathionine beta-synthase and other proteins. ABU16_3955 SM00904 Riboflavin kinase ABU16_3959 SM00382 ATPases associated with a variety of cellular activities ABU16_3962 SM00062 Bacterial periplasmic substrate-binding proteins ABU16_3963 SM00062 Bacterial periplasmic substrate-binding proteins ABU16_3966 SM00849 Metallo-beta-lactamase superfamily ABU16_3971 SM00852 Probable molybdopterin binding domain ABU16_3985 SM00981 ABU16_3985 ABU16_3991 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. ABU16_3992 SM00267 diguanylate cyclase ABU16_3994 SM00363 S4 RNA-binding domain ABU16_3994 SM01390 ABU16_3994 ABU16_3996 SM00363 S4 RNA-binding domain ABU16_3999 SM00116 Domain in cystathionine beta-synthase and other proteins. ABU16_4003 SM00354 helix_turn _helix lactose operon repressor ABU16_4004 SM00830 Chorismate mutase type II ABU16_4009 SM00382 ATPases associated with a variety of cellular activities ABU16_4009 SM00843 ABU16_4009 ABU16_4017 SM00919 Malic enzyme, NAD binding domain ABU16_4017 SM01274 ABU16_4017 ABU16_4018 SM00849 Metallo-beta-lactamase superfamily ABU16_4022 SM00642 Alpha-amylase domain ABU16_4023 SM00046 Diacylglycerol kinase catalytic domain (presumed) ABU16_4030 SM00382 ATPases associated with a variety of cellular activities ABU16_4032 SM00363 S4 RNA-binding domain ABU16_4042 SM00342 helix_turn_helix, arabinose operon control protein ABU16_4047 SM00729 Elongator protein 3, MiaB family, Radical SAM ABU16_4047 SM00876 Biotin and Thiamin Synthesis associated domain ABU16_4053 SM00354 helix_turn _helix lactose operon repressor ABU16_4058 SM00450 Rhodanese Homology Domain ABU16_4062 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) ABU16_4062 SM00091 PAS domain ABU16_4066 SM00382 ATPases associated with a variety of cellular activities ABU16_4067 SM00387 Histidine kinase-like ATPases ABU16_4068 SM00448 cheY-homologous receiver domain ABU16_4068 SM00862 Transcriptional regulatory protein, C terminal ABU16_4070 SM00382 ATPases associated with a variety of cellular activities ABU16_4073 SM00382 ATPases associated with a variety of cellular activities ABU16_4074 SM00345 helix_turn_helix gluconate operon transcriptional repressor ABU16_4077 SM00729 Elongator protein 3, MiaB family, Radical SAM ABU16_4089 SM00382 ATPases associated with a variety of cellular activities ABU16_4097 SM01234 ABU16_4097 ABU16_4098 SM00947 Carbonic anhydrase ABU16_4105 SM00382 ATPases associated with a variety of cellular activities ABU16_4107 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain ABU16_4116 SM00984 UDP binding domain ABU16_4128 SM00642 Alpha-amylase domain ABU16_4131 SM00244 prohibitin homologues ABU16_4142 SM00047 Lysozyme subfamily 2 ABU16_4152 SM00420 helix_turn_helix, Deoxyribose operon repressor ABU16_4152 SM01134 ABU16_4152 ABU16_4153 SM01007 Class II Aldolase and Adducin N-terminal domain ABU16_4155 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). ABU16_4155 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain ABU16_4155 SM00319 Homologues of the ligand binding domain of Tar ABU16_4156 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). ABU16_4156 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain ABU16_4156 SM00319 Homologues of the ligand binding domain of Tar ABU16_4157 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). ABU16_4157 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain ABU16_4157 SM00319 Homologues of the ligand binding domain of Tar ABU16_4158 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). ABU16_4158 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain ABU16_4158 SM00319 Homologues of the ligand binding domain of Tar ABU16_4163 SM00642 Alpha-amylase domain ABU16_4164 SM01091 Transporter associated domain ABU16_4175 SM00316 Ribosomal protein S1-like RNA-binding domain ABU16_4177 SM00344 helix_turn_helix ASNC type ABU16_4181 SM00387 Histidine kinase-like ATPases ABU16_4181 SM00388 His Kinase A (phosphoacceptor) domain ABU16_4182 SM01298 ABU16_4182 ABU16_4183 SM00479 ABU16_4183 ABU16_4189 SM00091 PAS domain ABU16_4189 SM00387 Histidine kinase-like ATPases ABU16_4190 SM00448 cheY-homologous receiver domain ABU16_4192 SM00382 ATPases associated with a variety of cellular activities ABU16_4205 SM00421 helix_turn_helix, Lux Regulon ABU16_4205 SM00448 cheY-homologous receiver domain ABU16_4206 SM00387 Histidine kinase-like ATPases ABU16_4207 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. ABU16_4213 SM00052 Putative diguanylate phosphodiesterase ABU16_4222 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif.