locus-tag class description J9312_00005 PF00308 Bacterial dnaA protein J9312_00005 PF08299 Bacterial dnaA protein helix-turn-helix J9312_00005 PF11638 DnaA N-terminal domain J9312_00010 PF00712 DNA polymerase III beta subunit, N-terminal domain J9312_00010 PF02767 DNA polymerase III beta subunit, central domain J9312_00010 PF02768 DNA polymerase III beta subunit, C-terminal domain J9312_00020 PF02463 RecF/RecN/SMC N terminal domain J9312_00025 PF04025 Domain of unknown function (DUF370) J9312_00030 PF01751 Toprim domain J9312_00030 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J9312_00030 PF00204 DNA gyrase B J9312_00030 PF00986 DNA gyrase B subunit, carboxyl terminus J9312_00035 PF03989 DNA gyrase C-terminal domain, beta-propeller J9312_00035 PF00521 DNA gyrase/topoisomerase IV, subunit A J9312_00065 PF14175 YaaC-like Protein J9312_00070 PF00571 CBS domain J9312_00070 PF00478 IMP dehydrogenase / GMP reductase domain J9312_00075 PF07943 Penicillin-binding protein 5, C-terminal domain J9312_00075 PF00768 D-alanyl-D-alanine carboxypeptidase J9312_00080 PF01680 SOR/SNZ family J9312_00085 PF01174 SNO glutamine amidotransferase family J9312_00090 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) J9312_00090 PF02403 Seryl-tRNA synthetase N-terminal domain J9312_00100 PF01712 Deoxynucleoside kinase J9312_00105 PF01712 Deoxynucleoside kinase J9312_00110 PF00704 Glycosyl hydrolases family 18 J9312_00110 PF01476 LysM domain J9312_00115 PF00857 Isochorismatase family J9312_00120 PF14437 MafB19-like deaminase J9312_00130 PF12169 DNA polymerase III subunits gamma and tau domain III J9312_00135 PF02575 YbaB/EbfC DNA-binding family J9312_00140 PF13662 Toprim domain J9312_00140 PF02132 RecR protein J9312_00145 PF10704 Protein of unknown function (DUF2508) J9312_00150 PF07441 SigmaK-factor processing regulatory protein BofA J9312_00180 PF10764 Inhibitor of sigma-G Gin J9312_00185 PF10112 5-bromo-4-chloroindolyl phosphate hydrolysis protein J9312_00190 PF05816 Toxic anion resistance protein (TelA) J9312_00195 PF01276 Orn/Lys/Arg decarboxylase, major domain J9312_00195 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain J9312_00200 PF02223 Thymidylate kinase J9312_00205 PF06153 Cyclic-di-AMP receptor J9312_00210 PF03885 Protein of unknown function (DUF327) J9312_00215 PF09115 DNA polymerase III, delta subunit, C terminal J9312_00220 PF04468 PSP1 C-terminal conserved region J9312_00225 PF06156 Initiation control protein YabA J9312_00230 PF05175 Methyltransferase small domain J9312_00235 PF01541 GIY-YIG catalytic domain J9312_00240 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases J9312_00245 PF00872 Transposase, Mutator family J9312_00250 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin J9312_00250 PF18277 AbrB C-terminal domain J9312_00255 PF01588 Putative tRNA binding domain J9312_00255 PF09334 tRNA synthetases class I (M) J9312_00255 PF08264 Anticodon-binding domain of tRNA J9312_00260 PF01026 TatD related DNase J9312_00265 PF07501 G5 domain J9312_00265 PF03990 G5-linked-Ubiquitin-like domain J9312_00265 PF06725 3D domain J9312_00270 PF13662 Toprim domain J9312_00270 PF13331 Domain of unknown function (DUF4093) J9312_00275 PF00398 Ribosomal RNA adenine dimethylase J9312_00280 PF05582 YabG peptidase U57 J9312_00285 PF06257 Biofilm formation stimulator VEG J9312_00290 PF00269 Small, acid-soluble spore proteins, alpha/beta type J9312_00295 PF00288 GHMP kinases N terminal domain J9312_00295 PF08544 GHMP kinases C terminal J9312_00300 PF09182 Bacterial purine repressor, N-terminal J9312_00300 PF00156 Phosphoribosyl transferase domain J9312_00305 PF01042 Endoribonuclease L-PSP J9312_00310 PF04026 SpoVG J9312_00315 PF00483 Nucleotidyl transferase J9312_00315 PF00132 Bacterial transferase hexapeptide (six repeats) J9312_00320 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase J9312_00320 PF14572 Phosphoribosyl synthetase-associated domain J9312_00325 PF01386 Ribosomal L25p family J9312_00325 PF14693 Ribosomal protein TL5, C-terminal domain J9312_00330 PF01195 Peptidyl-tRNA hydrolase J9312_00335 PF10955 Protein of unknown function (DUF2757) J9312_00340 PF02559 CarD-like/TRCF domain J9312_00340 PF00270 DEAD/DEAH box helicase J9312_00340 PF00271 Helicase conserved C-terminal domain J9312_00340 PF03461 TRCF domain J9312_00340 PF17757 UvrB interaction domain J9312_00345 PF15714 Stage V sporulation protein T C-terminal, transcription factor J9312_00345 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin J9312_00350 PF14667 Polysaccharide biosynthesis C-terminal domain J9312_00350 PF01943 Polysaccharide biosynthesis protein J9312_00355 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases J9312_00355 PF03819 MazG nucleotide pyrophosphohydrolase domain J9312_00360 PF01479 S4 domain J9312_00365 PF07873 YabP family J9312_00370 PF09578 Spore cortex protein YabQ (Spore_YabQ) J9312_00375 PF04977 Septum formation initiator J9312_00380 PF00575 S1 RNA binding domain J9312_00395 PF07228 Stage II sporulation protein E (SpoIIE) J9312_00400 PF00092 von Willebrand factor type A domain J9312_00405 PF00069 Protein kinase domain J9312_00410 PF01171 PP-loop family J9312_00410 PF09179 TilS substrate binding domain J9312_00410 PF11734 TilS substrate C-terminal domain J9312_00415 PF00156 Phosphoribosyl transferase domain J9312_00420 PF00004 ATPase family associated with various cellular activities (AAA) J9312_00420 PF17862 AAA+ lid domain J9312_00420 PF01434 Peptidase family M41 J9312_00420 PF06480 FtsH Extracellular J9312_00425 PF03309 Type III pantothenate kinase J9312_00430 PF01430 Hsp33 protein J9312_00435 PF13145 PPIC-type PPIASE domain J9312_00440 PF00291 Pyridoxal-phosphate dependent enzyme J9312_00445 PF00425 chorismate binding enzyme J9312_00445 PF04715 Anthranilate synthase component I, N terminal region J9312_00450 PF00117 Glutamine amidotransferase class-I J9312_00455 PF01063 Amino-transferase class IV J9312_00460 PF00809 Pterin binding enzyme J9312_00465 PF02152 Dihydroneopterin aldolase J9312_00470 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) J9312_00475 PF01381 Helix-turn-helix J9312_00480 PF01207 Dihydrouridine synthase (Dus) J9312_00485 PF01336 OB-fold nucleic acid binding domain J9312_00485 PF00152 tRNA synthetases class II (D, K and N) J9312_00565 PF17727 CtsR C-terminal dimerization domain J9312_00565 PF05848 CtsR N-terminal HTH domain J9312_00570 PF02151 UvrB/uvrC motif J9312_00575 PF00217 ATP:guanido phosphotransferase, C-terminal catalytic domain J9312_00580 PF10431 C-terminal, D2-small domain, of ClpB protein J9312_00580 PF02861 Clp amino terminal domain, pathogenicity island component J9312_00580 PF17871 AAA lid domain J9312_00580 PF07724 AAA domain (Cdc48 subfamily) J9312_00580 PF00004 ATPase family associated with various cellular activities (AAA) J9312_00585 PF18073 Rubredoxin metal binding domain J9312_00590 PF10635 DisA bacterial checkpoint controller linker region J9312_00590 PF02457 DisA bacterial checkpoint controller nucleotide-binding J9312_00600 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase J9312_00605 PF02542 YgbB family J9312_00610 PF00749 tRNA synthetases class I (E and Q), catalytic domain J9312_00615 PF06426 Serine acetyltransferase, N-terminal J9312_00615 PF00132 Bacterial transferase hexapeptide (six repeats) J9312_00620 PF01406 tRNA synthetases class I (C) catalytic domain J9312_00620 PF09190 DALR domain J9312_00625 PF00636 Ribonuclease III domain J9312_00630 PF08032 RNA 2'-O ribose methyltransferase substrate binding J9312_00630 PF00588 SpoU rRNA Methylase family J9312_00635 PF05991 YacP-like NYN domain J9312_00640 PF08281 Sigma-70, region 4 J9312_00640 PF04542 Sigma-70 region 2 J9312_00645 PF00471 Ribosomal protein L33 J9312_00650 PF00584 SecE/Sec61-gamma subunits of protein translocation complex J9312_00655 PF02357 Transcription termination factor nusG J9312_00655 PF00467 KOW motif J9312_00660 PF00298 Ribosomal protein L11, RNA binding domain J9312_00660 PF03946 Ribosomal protein L11, N-terminal domain J9312_00665 PF00687 Ribosomal protein L1p/L10e family J9312_00670 PF00466 Ribosomal protein L10 J9312_00675 PF00542 Ribosomal protein L7/L12 C-terminal domain J9312_00675 PF16320 Ribosomal protein L7/L12 dimerisation domain J9312_00680 PF05175 Methyltransferase small domain J9312_00685 PF04561 RNA polymerase Rpb2, domain 2 J9312_00685 PF04565 RNA polymerase Rpb2, domain 3 J9312_00685 PF10385 RNA polymerase beta subunit external 1 domain J9312_00685 PF00562 RNA polymerase Rpb2, domain 6 J9312_00685 PF04560 RNA polymerase Rpb2, domain 7 J9312_00685 PF04563 RNA polymerase beta subunit J9312_00690 PF04997 RNA polymerase Rpb1, domain 1 J9312_00690 PF04983 RNA polymerase Rpb1, domain 3 J9312_00690 PF05000 RNA polymerase Rpb1, domain 4 J9312_00690 PF04998 RNA polymerase Rpb1, domain 5 J9312_00690 PF00623 RNA polymerase Rpb1, domain 2 J9312_00695 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family J9312_00700 PF00164 Ribosomal protein S12/S23 J9312_00705 PF00177 Ribosomal protein S7p/S5e J9312_00710 PF00679 Elongation factor G C-terminus J9312_00710 PF14492 Elongation Factor G, domain II J9312_00710 PF03764 Elongation factor G, domain IV J9312_00710 PF00009 Elongation factor Tu GTP binding domain J9312_00710 PF03144 Elongation factor Tu domain 2 J9312_00715 PF00009 Elongation factor Tu GTP binding domain J9312_00715 PF03143 Elongation factor Tu C-terminal domain J9312_00715 PF03144 Elongation factor Tu domain 2 J9312_00720 PF12146 Serine aminopeptidase, S33 J9312_00725 PF00338 Ribosomal protein S10p/S20e J9312_00730 PF00297 Ribosomal protein L3 J9312_00735 PF00573 Ribosomal protein L4/L1 family J9312_00740 PF00276 Ribosomal protein L23 J9312_00745 PF00181 Ribosomal Proteins L2, RNA binding domain J9312_00745 PF03947 Ribosomal Proteins L2, C-terminal domain J9312_00750 PF00203 Ribosomal protein S19 J9312_00755 PF00237 Ribosomal protein L22p/L17e J9312_00760 PF07650 KH domain J9312_00760 PF00189 Ribosomal protein S3, C-terminal domain J9312_00765 PF00252 Ribosomal protein L16p/L10e J9312_00770 PF00831 Ribosomal L29 protein J9312_00775 PF00366 Ribosomal protein S17 J9312_00780 PF00238 Ribosomal protein L14p/L23e J9312_00785 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 J9312_00785 PF00467 KOW motif J9312_00790 PF00673 ribosomal L5P family C-terminus J9312_00790 PF00281 Ribosomal protein L5 J9312_00795 PF00253 Ribosomal protein S14p/S29e J9312_00800 PF00410 Ribosomal protein S8 J9312_00805 PF00347 Ribosomal protein L6 J9312_00810 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast J9312_00815 PF03719 Ribosomal protein S5, C-terminal domain J9312_00815 PF00333 Ribosomal protein S5, N-terminal domain J9312_00820 PF00327 Ribosomal protein L30p/L7e J9312_00825 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A J9312_00830 PF00344 SecY translocase J9312_00835 PF05191 Adenylate kinase, active site lid J9312_00840 PF00557 Metallopeptidase family M24 J9312_00850 PF01176 Translation initiation factor 1A / IF-1 J9312_00855 PF00444 Ribosomal protein L36 J9312_00860 PF00416 Ribosomal protein S13/S18 J9312_00865 PF00411 Ribosomal protein S11 J9312_00870 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain J9312_00870 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain J9312_00870 PF01000 RNA polymerase Rpb3/RpoA insert domain J9312_00875 PF01196 Ribosomal protein L17 J9312_00880 PF00005 ABC transporter J9312_00885 PF00005 ABC transporter J9312_00890 PF02361 Cobalt transport protein J9312_00895 PF01416 tRNA pseudouridine synthase J9312_00900 PF00572 Ribosomal protein L13 J9312_00905 PF00380 Ribosomal protein S9/S16 J9312_00910 PF08241 Methyltransferase domain J9312_00915 PF10730 Protein of unknown function (DUF2521) J9312_00920 PF01520 N-acetylmuramoyl-L-alanine amidase J9312_00925 PF10609 NUBPL iron-transfer P-loop NTPase J9312_00930 PF17898 Spore germination GerD central core domain J9312_00935 PF14089 KinB-signalling pathway activation in sporulation J9312_00940 PF01522 Polysaccharide deacetylase J9312_01025 PF00916 Sulfate permease family J9312_01025 PF01740 STAS domain J9312_01030 PF01758 Sodium Bile acid symporter family J9312_01035 PF00756 Putative esterase J9312_01040 PF01032 FecCD transport family J9312_01045 PF01032 FecCD transport family J9312_01050 PF01497 Periplasmic binding protein J9312_01055 PF01497 Periplasmic binding protein J9312_01055 PF12833 Helix-turn-helix domain J9312_01060 PF07075 Protein of unknown function (DUF1343) J9312_01065 PF01915 Glycosyl hydrolase family 3 C-terminal domain J9312_01065 PF00933 Glycosyl hydrolase family 3 N terminal domain J9312_01070 PF00144 Beta-lactamase J9312_01075 PF02378 Phosphotransferase system, EIIC J9312_01075 PF00367 phosphotransferase system, EIIB J9312_01080 PF01380 SIS domain J9312_01080 PF01418 Helix-turn-helix domain, rpiR family J9312_01085 PF01380 SIS domain J9312_01095 PF04463 Protein of unknown function (DUF523) J9312_01125 PF08281 Sigma-70, region 4 J9312_01125 PF04542 Sigma-70 region 2 J9312_01130 PF13490 Putative zinc-finger J9312_01135 PF02457 DisA bacterial checkpoint controller nucleotide-binding J9312_01140 PF07949 YbbR-like protein J9312_01145 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III J9312_01145 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II J9312_01145 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I J9312_01145 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain J9312_01150 PF01380 SIS domain J9312_01160 PF07934 8-oxoguanine DNA glycosylase, N-terminal domain J9312_01160 PF00730 HhH-GPD superfamily base excision DNA repair protein J9312_01165 PF12833 Helix-turn-helix domain J9312_01165 PF02805 Metal binding domain of Ada J9312_01170 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain J9312_01170 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain J9312_01175 PF00361 Proton-conducting membrane transporter J9312_01175 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus J9312_01180 PF10070 Uncharacterized protein conserved in bacteria (DUF2309) J9312_01195 PF10057 Uncharacterized conserved protein (DUF2294) J9312_01205 PF07690 Major Facilitator Superfamily J9312_01220 PF00561 alpha/beta hydrolase fold J9312_01225 PF00072 Response regulator receiver domain J9312_01225 PF00486 Transcriptional regulatory protein, C terminal J9312_01230 PF00512 His Kinase A (phospho-acceptor) domain J9312_01230 PF00672 HAMP domain J9312_01240 PF00069 Protein kinase domain J9312_01250 PF16226 Domain of unknown function (DUF4885) J9312_01255 PF00324 Amino acid permease J9312_01260 PF17334 Minor curli fiber component A J9312_01270 PF17340 Family of unknown function (DUF5370) J9312_01275 PF00905 Penicillin binding protein transpeptidase domain J9312_01280 PF00067 Cytochrome P450 J9312_01290 PF13520 Amino acid permease J9312_01295 PF03009 Glycerophosphoryl diester phosphodiesterase family J9312_01300 PF07690 Major Facilitator Superfamily J9312_01305 PF10852 Protein of unknown function (DUF2651) J9312_01310 PF00583 Acetyltransferase (GNAT) family J9312_01310 PF01047 MarR family J9312_01325 PF01471 Putative peptidoglycan binding domain J9312_01325 PF08924 Domain of unknown function (DUF1906) J9312_01330 PF00892 EamA-like transporter family J9312_01335 PF02311 AraC-like ligand binding domain J9312_01335 PF12833 Helix-turn-helix domain J9312_01345 PF04688 SPP1 phage holin J9312_01350 PF05257 CHAP domain J9312_01350 PF01476 LysM domain J9312_01360 PF02222 ATP-grasp domain J9312_01365 PF00089 Trypsin J9312_01370 PF10794 Protein of unknown function (DUF2606) J9312_01375 PF12697 Alpha/beta hydrolase family J9312_01380 PF01066 CDP-alcohol phosphatidyltransferase J9312_01385 PF09335 SNARE associated Golgi protein J9312_01390 PF02666 Phosphatidylserine decarboxylase J9312_01400 PF05139 Erythromycin esterase J9312_01405 PF12833 Helix-turn-helix domain J9312_01410 PF17773 UPF0176 acylphosphatase like domain J9312_01410 PF12368 Rhodanase C-terminal J9312_01410 PF00581 Rhodanese-like domain J9312_01415 PF00375 Sodium:dicarboxylate symporter family J9312_01420 PF02378 Phosphotransferase system, EIIC J9312_01420 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 J9312_01420 PF00367 phosphotransferase system, EIIB J9312_01425 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase J9312_01430 PF07702 UTRA domain J9312_01430 PF00392 Bacterial regulatory proteins, gntR family J9312_01435 PF07853 Protein of unknown function (DUF1648) J9312_01440 PF01063 Amino-transferase class IV J9312_01445 PF00324 Amino acid permease J9312_01450 PF02574 Homocysteine S-methyltransferase J9312_01460 PF04960 Glutaminase J9312_01465 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J9312_01470 PF08664 YcbB domain J9312_01470 PF00072 Response regulator receiver domain J9312_01475 PF00701 Dihydrodipicolinate synthetase family J9312_01480 PF00171 Aldehyde dehydrogenase family J9312_01485 PF07690 Major Facilitator Superfamily J9312_01490 PF13378 Enolase C-terminal domain-like J9312_01495 PF00392 Bacterial regulatory proteins, gntR family J9312_01495 PF07729 FCD domain J9312_01500 PF08666 SAF domain J9312_01500 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus J9312_01505 PF01636 Phosphotransferase enzyme family J9312_01510 PF15777 Tryptophan RNA-binding attenuator protein inhibitory protein J9312_01515 PF00892 EamA-like transporter family J9312_01520 PF00486 Transcriptional regulatory protein, C terminal J9312_01520 PF00072 Response regulator receiver domain J9312_01525 PF00512 His Kinase A (phospho-acceptor) domain J9312_01525 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J9312_01530 PF00005 ABC transporter J9312_01545 PF10710 Protein of unknown function (DUF2512) J9312_01550 PF07486 Cell Wall Hydrolase J9312_01555 PF10138 vWA found in TerF C terminus J9312_01565 PF09423 PhoD-like phosphatase J9312_01565 PF16655 PhoD-like phosphatase, N-terminal domain J9312_01570 PF02416 mttA/Hcf106 family J9312_01575 PF00902 Sec-independent protein translocase protein (TatC) J9312_01580 PF01470 Pyroglutamyl peptidase J9312_01585 PF00266 Aminotransferase class-V J9312_01590 PF07690 Major Facilitator Superfamily J9312_01595 PF00440 Bacterial regulatory proteins, tetR family J9312_01600 PF17763 Glutaminase/Asparaginase C-terminal domain J9312_01600 PF00710 Asparaginase, N-terminal J9312_01605 PF01674 Lipase (class 2) J9312_01610 PF06271 RDD family J9312_01615 PF02810 SEC-C motif J9312_01615 PF05225 helix-turn-helix, Psq domain J9312_01625 PF04397 LytTr DNA-binding domain J9312_01625 PF00072 Response regulator receiver domain J9312_01635 PF12679 ABC-2 family transporter protein J9312_01640 PF00248 Aldo/keto reductase family J9312_01645 PF11611 Domain of unknown function (DUF4352) J9312_01645 PF17118 Domain of unknown function (DUF5105) J9312_01655 PF16244 Domain of unknown function (DUF4901) J9312_01660 PF16244 Domain of unknown function (DUF4901) J9312_01665 PF13539 D-alanyl-D-alanine carboxypeptidase J9312_01685 PF01297 Zinc-uptake complex component A periplasmic J9312_01690 PF00005 ABC transporter J9312_01695 PF00950 ABC 3 transport family J9312_01700 PF00296 Luciferase-like monooxygenase J9312_01705 PF02342 TerD domain J9312_01710 PF02342 TerD domain J9312_01715 PF02342 TerD domain J9312_01720 PF03741 Integral membrane protein TerC family J9312_01725 PF14266 Putative component of 'biosynthetic module' J9312_01730 PF05816 Toxic anion resistance protein (TelA) J9312_01735 PF07690 Major Facilitator Superfamily J9312_01740 PF07690 Major Facilitator Superfamily J9312_01750 PF00571 CBS domain J9312_01750 PF00005 ABC transporter J9312_01755 PF00528 Binding-protein-dependent transport system inner membrane component J9312_01760 PF04069 Substrate binding domain of ABC-type glycine betaine transport system J9312_01765 PF01546 Peptidase family M20/M25/M40 J9312_01765 PF07687 Peptidase dimerisation domain J9312_01770 PF03606 C4-dicarboxylate anaerobic carrier J9312_01785 PF00056 lactate/malate dehydrogenase, NAD binding domain J9312_01785 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain J9312_01800 PF08892 YqcI/YcgG family J9312_01815 PF02540 NAD synthase J9312_01825 PF01202 Shikimate kinase J9312_01830 PF08241 Methyltransferase domain J9312_01835 PF03466 LysR substrate binding domain J9312_01835 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J9312_01840 PF05448 Acetyl xylan esterase (AXE1) J9312_01845 PF10127 RNA repair pathway DNA polymerase beta family J9312_01850 PF01619 Proline dehydrogenase J9312_01855 PF00171 Aldehyde dehydrogenase family J9312_01860 PF00474 Sodium:solute symporter family J9312_01865 PF17853 GGDEF-like domain J9312_01865 PF13556 PucR C-terminal helix-turn-helix domain J9312_01870 PF09323 Domain of unknown function (DUF1980) J9312_01875 PF03773 Predicted permease J9312_01880 PF00561 alpha/beta hydrolase fold J9312_01885 PF07992 Pyridine nucleotide-disulphide oxidoreductase J9312_01890 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases J9312_01895 PF00355 Rieske [2Fe-2S] domain J9312_01900 PF01077 Nitrite and sulphite reductase 4Fe-4S domain J9312_01900 PF04324 BFD-like [2Fe-2S] binding domain J9312_01900 PF07992 Pyridine nucleotide-disulphide oxidoreductase J9312_01900 PF18267 Rubredoxin NAD+ reductase C-terminal domain J9312_01900 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain J9312_01905 PF04879 Molybdopterin oxidoreductase Fe4S4 domain J9312_01905 PF00384 Molybdopterin oxidoreductase J9312_01905 PF01568 Molydopterin dinucleotide binding domain J9312_01910 PF04324 BFD-like [2Fe-2S] binding domain J9312_01910 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain J9312_01910 PF07992 Pyridine nucleotide-disulphide oxidoreductase J9312_01910 PF18267 Rubredoxin NAD+ reductase C-terminal domain J9312_01915 PF07690 Major Facilitator Superfamily J9312_01925 PF03734 L,D-transpeptidase catalytic domain J9312_01940 PF00528 Binding-protein-dependent transport system inner membrane component J9312_01945 PF00497 Bacterial extracellular solute-binding proteins, family 3 J9312_01955 PF06271 RDD family J9312_01960 PF10925 Protein of unknown function (DUF2680) J9312_01965 PF01047 MarR family J9312_01980 PF00232 Glycosyl hydrolase family 1 J9312_01985 PF11033 Competence protein J (ComJ) J9312_01990 PF14040 Deoxyribonuclease NucA/NucB J9312_02000 PF01380 SIS domain J9312_02005 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family J9312_02010 PF01638 HxlR-like helix-turn-helix J9312_02015 PF00501 AMP-binding enzyme J9312_02015 PF13193 AMP-binding enzyme C-terminal domain J9312_02015 PF00550 Phosphopantetheine attachment site J9312_02015 PF00668 Condensation domain J9312_02020 PF00668 Condensation domain J9312_02020 PF00550 Phosphopantetheine attachment site J9312_02020 PF13193 AMP-binding enzyme C-terminal domain J9312_02020 PF00501 AMP-binding enzyme J9312_02025 PF00501 AMP-binding enzyme J9312_02025 PF13193 AMP-binding enzyme C-terminal domain J9312_02025 PF00668 Condensation domain J9312_02025 PF00975 Thioesterase domain J9312_02025 PF00550 Phosphopantetheine attachment site J9312_02030 PF00975 Thioesterase domain J9312_02035 PF07690 Major Facilitator Superfamily J9312_02040 PF14317 YcxB-like protein J9312_02045 PF00892 EamA-like transporter family J9312_02050 PF00392 Bacterial regulatory proteins, gntR family J9312_02050 PF00155 Aminotransferase class I and II J9312_02055 PF01648 4'-phosphopantetheinyl transferase superfamily J9312_02065 PF00005 ABC transporter J9312_02070 PF00528 Binding-protein-dependent transport system inner membrane component J9312_02075 PF00497 Bacterial extracellular solute-binding proteins, family 3 J9312_02080 PF03466 LysR substrate binding domain J9312_02080 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J9312_02085 PF02441 Flavoprotein J9312_02090 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase J9312_02105 PF00561 alpha/beta hydrolase fold J9312_02110 PF00854 POT family J9312_02115 PF12708 Pectate lyase superfamily protein J9312_02115 PF13229 Right handed beta helix region J9312_02125 PF03323 Bacillus/Clostridium GerA spore germination protein J9312_02130 PF05504 Spore germination B3/ GerAC like, C-terminal J9312_02135 PF03845 Spore germination protein J9312_02140 PF00005 ABC transporter J9312_02145 PF12704 MacB-like periplasmic core domain J9312_02145 PF02687 FtsX-like permease family J9312_02150 PF00486 Transcriptional regulatory protein, C terminal J9312_02150 PF00072 Response regulator receiver domain J9312_02155 PF00512 His Kinase A (phospho-acceptor) domain J9312_02155 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J9312_02155 PF00672 HAMP domain J9312_02160 PF18801 response regulator aspartate phosphatase H, N terminal J9312_02165 PF11131 Rap-phr extracellular signalling J9312_02170 PF09680 Family of unknown function J9312_02175 PF09680 Family of unknown function J9312_02180 PF00696 Amino acid kinase family J9312_02180 PF13840 ACT domain J9312_02185 PF01032 FecCD transport family J9312_02190 PF01032 FecCD transport family J9312_02195 PF00005 ABC transporter J9312_02200 PF01497 Periplasmic binding protein J9312_02210 PF07690 Major Facilitator Superfamily J9312_02215 PF00440 Bacterial regulatory proteins, tetR family J9312_02220 PF00881 Nitroreductase family J9312_02225 PF03992 Antibiotic biosynthesis monooxygenase J9312_02230 PF01022 Bacterial regulatory protein, arsR family J9312_02235 PF00392 Bacterial regulatory proteins, gntR family J9312_02235 PF00155 Aminotransferase class I and II J9312_02240 PF00202 Aminotransferase class-III J9312_02245 PF00171 Aldehyde dehydrogenase family J9312_02250 PF06800 Sugar transport protein J9312_02260 PF07987 Domain of unkown function (DUF1775) J9312_02265 PF04234 CopC domain J9312_02265 PF13115 YtkA-like J9312_02265 PF05425 Copper resistance protein D J9312_02270 PF08220 DeoR-like helix-turn-helix domain J9312_02270 PF05573 NosL J9312_02280 PF02378 Phosphotransferase system, EIIC J9312_02280 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit J9312_02285 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 J9312_02290 PF01232 Mannitol dehydrogenase Rossmann domain J9312_02290 PF08125 Mannitol dehydrogenase C-terminal domain J9312_02295 PF00180 Isocitrate/isopropylmalate dehydrogenase J9312_02300 PF10502 Signal peptidase, peptidase S26 J9312_02310 PF07977 FabA-like domain J9312_02325 PF03746 LamB/YcsF family J9312_02330 PF01566 Natural resistance-associated macrophage protein J9312_02335 PF07286 Protein of unknown function (DUF1445) J9312_02340 PF02682 Carboxyltransferase domain, subdomain C and D J9312_02345 PF02626 Carboxyltransferase domain, subdomain A and B J9312_02350 PF01614 Bacterial transcriptional regulator J9312_02350 PF09339 IclR helix-turn-helix domain J9312_02355 PF13472 GDSL-like Lipase/Acylhydrolase family J9312_02360 PF13129 Protein of unknown function (DUF3953) J9312_02365 PF03992 Antibiotic biosynthesis monooxygenase J9312_02370 PF00905 Penicillin binding protein transpeptidase domain J9312_02370 PF03717 Penicillin-binding Protein dimerisation domain J9312_02370 PF05223 NTF2-like N-terminal transpeptidase domain J9312_02375 PF00248 Aldo/keto reductase family J9312_02380 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 J9312_02380 PF00874 PRD domain J9312_02380 PF05043 Mga helix-turn-helix domain J9312_02380 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit J9312_02380 PF08279 HTH domain J9312_02385 PF00501 AMP-binding enzyme J9312_02385 PF13193 AMP-binding enzyme C-terminal domain J9312_02390 PF13649 Methyltransferase domain J9312_02405 PF13302 Acetyltransferase (GNAT) domain J9312_02410 PF16242 Pyridoxamine 5'-phosphate oxidase like J9312_02415 PF10997 Alternate to MurJ J9312_02420 PF12823 Domain of unknown function (DUF3817) J9312_02425 PF01037 Lrp/AsnC ligand binding domain J9312_02430 PF01751 Toprim domain J9312_02430 PF01131 DNA topoisomerase J9312_02435 PF00293 NUDIX domain J9312_02440 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain J9312_02440 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain J9312_02440 PF00205 Thiamine pyrophosphate enzyme, central domain J9312_02465 PF01566 Natural resistance-associated macrophage protein J9312_02470 PF04226 Transglycosylase associated protein J9312_02475 PF09954 Uncharacterized protein conserved in bacteria (DUF2188) J9312_02480 PF12787 EcsC protein family J9312_02485 PF10685 Stress-induced bacterial acidophilic repeat motif J9312_02485 PF00477 Small hydrophilic plant seed protein J9312_02490 PF07883 Cupin domain J9312_02495 PF16291 Domain of unknown function (DUF4937 J9312_02500 PF05067 Manganese containing catalase J9312_02505 PF03480 Bacterial extracellular solute-binding protein, family 7 J9312_02510 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J9312_02510 PF17203 Single cache domain 3 J9312_02510 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain J9312_02515 PF08279 HTH domain J9312_02515 PF00072 Response regulator receiver domain J9312_02520 PF00375 Sodium:dicarboxylate symporter family J9312_02525 PF01594 AI-2E family transporter J9312_02530 PF00005 ABC transporter J9312_02545 PF02771 Acyl-CoA dehydrogenase, N-terminal domain J9312_02545 PF02770 Acyl-CoA dehydrogenase, middle domain J9312_02545 PF08028 Acyl-CoA dehydrogenase, C-terminal domain J9312_02550 PF13040 Fur-regulated basic protein B J9312_02560 PF16916 Dimerisation domain of Zinc Transporter J9312_02560 PF01545 Cation efflux family J9312_02565 PF00085 Thioredoxin J9312_02570 PF07478 D-ala D-ala ligase C-terminus J9312_02570 PF01820 D-ala D-ala ligase N-terminus J9312_02575 PF08245 Mur ligase middle domain J9312_02575 PF02875 Mur ligase family, glutamate ligase domain J9312_02575 PF01225 Mur ligase family, catalytic domain J9312_02580 PF00271 Helicase conserved C-terminal domain J9312_02580 PF00270 DEAD/DEAH box helicase J9312_02585 PF03703 Bacterial PH domain J9312_02590 PF03703 Bacterial PH domain J9312_02595 PF01694 Rhomboid family J9312_02600 PF01648 4'-phosphopantetheinyl transferase superfamily J9312_02610 PF01168 Alanine racemase, N-terminal domain J9312_02610 PF00842 Alanine racemase, C-terminal domain J9312_02615 PF01402 Ribbon-helix-helix protein, copG family J9312_02620 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system J9312_02625 PF08678 Rsbr N terminal J9312_02625 PF01740 STAS domain J9312_02630 PF01740 STAS domain J9312_02635 PF13581 Histidine kinase-like ATPase domain J9312_02640 PF07228 Stage II sporulation protein E (SpoIIE) J9312_02640 PF08673 Phosphoserine phosphatase RsbU, N-terminal domain J9312_02645 PF01740 STAS domain J9312_02650 PF13581 Histidine kinase-like ATPase domain J9312_02655 PF04545 Sigma-70, region 4 J9312_02655 PF04539 Sigma-70 region 3 J9312_02655 PF04542 Sigma-70 region 2 J9312_02660 PF07228 Stage II sporulation protein E (SpoIIE) J9312_02675 PF01878 EVE domain J9312_02680 PF01047 MarR family J9312_02685 PF16921 Tex protein YqgF-like domain J9312_02685 PF09371 Tex-like protein N-terminal domain J9312_02685 PF00575 S1 RNA binding domain J9312_02685 PF17674 HHH domain J9312_02695 PF17283 SprT-like zinc ribbon domain J9312_02695 PF10263 SprT-like family J9312_02735 PF00589 Phage integrase family J9312_02735 PF14659 Phage integrase, N-terminal SAM-like domain J9312_02740 PF06114 IrrE N-terminal-like domain J9312_02745 PF01381 Helix-turn-helix J9312_02770 PF06125 Bacterial protein of unknown function (DUF961) J9312_02780 PF18106 Rolling Circle replication initiation protein N-terminal domain J9312_02780 PF02486 Replication initiation factor J9312_02800 PF12642 Conjugative transposon protein TcpC J9312_02810 PF12648 TcpE family J9312_02820 PF08960 Domain of unknown function (DUF1874) J9312_02830 PF00877 NlpC/P60 family J9312_02840 PF14729 Domain of unknown function with cystatin-like fold (DUF4467) J9312_02845 PF18801 response regulator aspartate phosphatase H, N terminal J9312_02850 PF00145 C-5 cytosine-specific DNA methylase J9312_02860 PF07728 AAA domain (dynein-related subfamily) J9312_02870 PF00392 Bacterial regulatory proteins, gntR family J9312_02870 PF07729 FCD domain J9312_02890 PF01695 IstB-like ATP binding protein J9312_02900 PF01381 Helix-turn-helix J9312_02920 PF01965 DJ-1/PfpI family J9312_02925 PF00313 'Cold-shock' DNA-binding domain J9312_02930 PF02559 CarD-like/TRCF domain J9312_02935 PF00892 EamA-like transporter family J9312_02940 PF02311 AraC-like ligand binding domain J9312_02940 PF12833 Helix-turn-helix domain J9312_02945 PF00892 EamA-like transporter family J9312_02950 PF06445 GyrI-like small molecule binding domain J9312_02950 PF12833 Helix-turn-helix domain J9312_02955 PF00155 Aminotransferase class I and II J9312_02955 PF00392 Bacterial regulatory proteins, gntR family J9312_02970 PF08818 Domain of unknown function (DU1801) J9312_02985 PF00381 PTS HPr component phosphorylation site J9312_02990 PF00440 Bacterial regulatory proteins, tetR family J9312_02995 PF00892 EamA-like transporter family J9312_03000 PF00155 Aminotransferase class I and II J9312_03000 PF00392 Bacterial regulatory proteins, gntR family J9312_03005 PF01575 MaoC like domain J9312_03010 PF06821 Serine hydrolase J9312_03015 PF01638 HxlR-like helix-turn-helix J9312_03020 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 J9312_03020 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) J9312_03025 PF01022 Bacterial regulatory protein, arsR family J9312_03030 PF02040 Arsenical pump membrane protein J9312_03040 PF12746 GNAT acetyltransferase J9312_03045 PF00892 EamA-like transporter family J9312_03050 PF00155 Aminotransferase class I and II J9312_03050 PF00392 Bacterial regulatory proteins, gntR family J9312_03055 PF00282 Pyridoxal-dependent decarboxylase conserved domain J9312_03060 PF01613 Flavin reductase like domain J9312_03070 PF02627 Carboxymuconolactone decarboxylase family J9312_03085 PF07730 Histidine kinase J9312_03085 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J9312_03090 PF00072 Response regulator receiver domain J9312_03090 PF00196 Bacterial regulatory proteins, luxR family J9312_03095 PF03176 MMPL family J9312_03100 PF12697 Alpha/beta hydrolase family J9312_03105 PF04474 Protein of unknown function (DUF554) J9312_03110 PF13411 MerR HTH family regulatory protein J9312_03110 PF06445 GyrI-like small molecule binding domain J9312_03115 PF16916 Dimerisation domain of Zinc Transporter J9312_03115 PF01545 Cation efflux family J9312_03120 PF00881 Nitroreductase family J9312_03125 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily J9312_03130 PF07681 DoxX J9312_03135 PF00085 Thioredoxin J9312_03140 PF10676 Spore germination protein gerPA/gerPF J9312_03150 PF10676 Spore germination protein gerPA/gerPF J9312_03155 PF04239 Protein of unknown function (DUF421) J9312_03160 PF04239 Protein of unknown function (DUF421) J9312_03165 PF00011 Hsp20/alpha crystallin family J9312_03170 PF10676 Spore germination protein gerPA/gerPF J9312_03175 PF10676 Spore germination protein gerPA/gerPF J9312_03180 PF00440 Bacterial regulatory proteins, tetR family J9312_03185 PF13564 DoxX-like family J9312_03190 PF00583 Acetyltransferase (GNAT) family J9312_03195 PF12848 ABC transporter J9312_03195 PF00005 ABC transporter J9312_03200 PF00324 Amino acid permease J9312_03205 PF05163 DinB family J9312_03210 PF01047 MarR family J9312_03215 PF03176 MMPL family J9312_03220 PF00881 Nitroreductase family J9312_03225 PF01047 MarR family J9312_03230 PF07690 Major Facilitator Superfamily J9312_03235 PF01925 Sulfite exporter TauE/SafE J9312_03240 PF00392 Bacterial regulatory proteins, gntR family J9312_03240 PF07729 FCD domain J9312_03245 PF00704 Glycosyl hydrolases family 18 J9312_03245 PF01476 LysM domain J9312_03250 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase J9312_03255 PF11611 Domain of unknown function (DUF4352) J9312_03255 PF08139 Prokaryotic membrane lipoprotein lipid attachment site J9312_03260 PF00245 Alkaline phosphatase J9312_03265 PF08818 Domain of unknown function (DU1801) J9312_03270 PF16302 Domain of unknown function (DUF4944) J9312_03275 PF00583 Acetyltransferase (GNAT) family J9312_03280 PF01966 HD domain J9312_03285 PF07563 Protein of unknown function (DUF1541) J9312_03290 PF07690 Major Facilitator Superfamily J9312_03295 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit J9312_03310 PF00232 Glycosyl hydrolase family 1 J9312_03315 PF00392 Bacterial regulatory proteins, gntR family J9312_03315 PF07702 UTRA domain J9312_03320 PF00480 ROK family J9312_03325 PF01238 Phosphomannose isomerase type I J9312_03330 PF02156 Glycosyl hydrolase family 26 J9312_03375 PF00586 AIR synthase related protein, N-terminal domain J9312_03375 PF02769 AIR synthase related protein, C-terminal domain J9312_03380 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE J9312_03385 PF00814 Glycoprotease family J9312_03390 PF00583 Acetyltransferase (GNAT) family J9312_03395 PF00814 Glycoprotease family J9312_03400 PF16326 ABC transporter C-terminal domain J9312_03400 PF12848 ABC transporter J9312_03400 PF00005 ABC transporter J9312_03405 PF01967 MoaC family J9312_03410 PF02629 CoA binding domain J9312_03410 PF06971 Putative DNA-binding protein N-terminus J9312_03415 PF02416 mttA/Hcf106 family J9312_03420 PF00902 Sec-independent protein translocase protein (TatC) J9312_03425 PF14146 Domain of unknown function (DUF4305) J9312_03430 PF02517 CPBP intramembrane metalloprotease J9312_03435 PF00166 Chaperonin 10 Kd subunit J9312_03440 PF00118 TCP-1/cpn60 chaperonin family J9312_03455 PF00931 NB-ARC domain J9312_03455 PF13176 Tetratricopeptide repeat J9312_03460 PF08240 Alcohol dehydrogenase GroES-like domain J9312_03460 PF00107 Zinc-binding dehydrogenase J9312_03470 PF00294 pfkB family carbohydrate kinase J9312_03475 PF04012 PspA/IM30 family J9312_03480 PF08271 TFIIB zinc-binding J9312_03485 PF04536 TPM domain J9312_03490 PF13421 SPFH domain-Band 7 family J9312_03500 PF00083 Sugar (and other) transporter J9312_03505 PF08240 Alcohol dehydrogenase GroES-like domain J9312_03505 PF00107 Zinc-binding dehydrogenase J9312_03510 PF03330 Lytic transglycolase J9312_03515 PF07676 WD40-like Beta Propeller Repeat J9312_03530 PF14169 Cold-inducible protein YdjO J9312_03535 PF12697 Alpha/beta hydrolase family J9312_03545 PF00394 Multicopper oxidase J9312_03545 PF07731 Multicopper oxidase J9312_03545 PF07732 Multicopper oxidase J9312_03550 PF00324 Amino acid permease J9312_03560 PF01545 Cation efflux family J9312_03560 PF16916 Dimerisation domain of Zinc Transporter J9312_03565 PF07726 ATPase family associated with various cellular activities (AAA) J9312_03565 PF17863 AAA lid domain J9312_03570 PF01882 Protein of unknown function DUF58 J9312_03575 PF11992 Domain of unknown function (DUF3488) J9312_03575 PF13559 Domain of unknown function (DUF4129) J9312_03575 PF01841 Transglutaminase-like superfamily J9312_03585 PF00117 Glutamine amidotransferase class-I J9312_03585 PF00958 GMP synthase C terminal domain J9312_03585 PF02540 NAD synthase J9312_03600 PF00860 Permease family J9312_03610 PF13076 Fur-regulated basic protein A J9312_03615 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) J9312_03620 PF14044 NETI protein J9312_03625 PF00731 AIR carboxylase J9312_03630 PF02222 ATP-grasp domain J9312_03630 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain J9312_03635 PF10397 Adenylosuccinate lyase C-terminus J9312_03635 PF00206 Lyase J9312_03640 PF01259 SAICAR synthetase J9312_03645 PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase J9312_03655 PF00586 AIR synthase related protein, N-terminal domain J9312_03655 PF02769 AIR synthase related protein, C-terminal domain J9312_03655 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain J9312_03660 PF00156 Phosphoribosyl transferase domain J9312_03665 PF02769 AIR synthase related protein, C-terminal domain J9312_03665 PF00586 AIR synthase related protein, N-terminal domain J9312_03670 PF00551 Formyl transferase J9312_03675 PF01808 AICARFT/IMPCHase bienzyme J9312_03675 PF02142 MGS-like domain J9312_03680 PF02843 Phosphoribosylglycinamide synthetase, C domain J9312_03680 PF02844 Phosphoribosylglycinamide synthetase, N domain J9312_03680 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain J9312_03685 PF01037 Lrp/AsnC ligand binding domain J9312_03690 PF13520 Amino acid permease J9312_03695 PF11127 Protein of unknown function (DUF2892) J9312_03700 PF13382 Adenine deaminase C-terminal domain J9312_03700 PF01979 Amidohydrolase family J9312_03705 PF11258 Protein of unknown function (DUF3048) N-terminal domain J9312_03705 PF17479 Protein of unknown function (DUF3048) C-terminal domain J9312_03710 PF01371 Trp repressor protein J9312_03715 PF01645 Conserved region in glutamate synthase J9312_03720 PF01884 PcrB family J9312_03725 PF00580 UvrD/REP helicase N-terminal domain J9312_03725 PF13361 UvrD-like helicase C-terminal domain J9312_03730 PF00533 BRCA1 C Terminus (BRCT) domain J9312_03730 PF01653 NAD-dependent DNA ligase adenylation domain J9312_03730 PF03120 NAD-dependent DNA ligase OB-fold domain J9312_03730 PF03119 NAD-dependent DNA ligase C4 zinc finger domain J9312_03730 PF12826 Helix-hairpin-helix motif J9312_03735 PF07537 CamS sex pheromone cAM373 precursor J9312_03745 PF01636 Phosphotransferase enzyme family J9312_03750 PF02308 MgtC family J9312_03755 PF00474 Sodium:solute symporter family J9312_03760 PF02686 Glu-tRNAGln amidotransferase C subunit J9312_03765 PF01425 Amidase J9312_03770 PF02934 GatB/GatE catalytic domain J9312_03770 PF02637 GatB domain J9312_03775 PF00440 Bacterial regulatory proteins, tetR family J9312_03780 PF00873 AcrB/AcrD/AcrF family J9312_03785 PF00781 Diacylglycerol kinase catalytic domain J9312_03790 PF01938 TRAM domain J9312_03790 PF05958 tRNA (Uracil-5-)-methyltransferase J9312_03815 PF04634 Protein of unknown function, DUF600 J9312_03820 PF04740 LXG domain of WXG superfamily J9312_03830 PF13176 Tetratricopeptide repeat J9312_03830 PF18801 response regulator aspartate phosphatase H, N terminal J9312_03840 PF01709 Transcriptional regulator J9312_03850 PF00440 Bacterial regulatory proteins, tetR family J9312_03855 PF12680 SnoaL-like domain J9312_03860 PF01370 NAD dependent epimerase/dehydratase family J9312_03865 PF11007 Spore coat associated protein JA (CotJA) J9312_03870 PF12652 CotJB protein J9312_03875 PF05067 Manganese containing catalase J9312_03880 PF00583 Acetyltransferase (GNAT) family J9312_03885 PF14150 YesK-like protein J9312_03890 PF04854 Protein of unknown function, DUF624 J9312_03895 PF02743 Cache domain J9312_03895 PF00672 HAMP domain J9312_03895 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J9312_03895 PF06580 Histidine kinase J9312_03900 PF12833 Helix-turn-helix domain J9312_03900 PF00072 Response regulator receiver domain J9312_03905 PF13416 Bacterial extracellular solute-binding protein J9312_03910 PF00528 Binding-protein-dependent transport system inner membrane component J9312_03915 PF00528 Binding-protein-dependent transport system inner membrane component J9312_03920 PF07470 Glycosyl Hydrolase Family 88 J9312_03925 PF12833 Helix-turn-helix domain J9312_03930 PF13472 GDSL-like Lipase/Acylhydrolase family J9312_03935 PF09224 Domain of unknown function (DUF1961) J9312_03940 PF04854 Protein of unknown function, DUF624 J9312_03945 PF18370 Rhamnogalacturonan I lyases beta-sheet domain J9312_03950 PF18370 Rhamnogalacturonan I lyases beta-sheet domain J9312_03950 PF01839 FG-GAP repeat J9312_03955 PF00657 GDSL-like Lipase/Acylhydrolase J9312_03960 PF02449 Beta-galactosidase J9312_03960 PF08533 Beta-galactosidase C-terminal domain J9312_03960 PF08532 Beta-galactosidase trimerisation domain J9312_03970 PF01547 Bacterial extracellular solute-binding protein J9312_03975 PF00528 Binding-protein-dependent transport system inner membrane component J9312_03980 PF00528 Binding-protein-dependent transport system inner membrane component J9312_03985 PF11975 Family 4 glycosyl hydrolase C-terminal domain J9312_03985 PF02056 Family 4 glycosyl hydrolase J9312_03990 PF04239 Protein of unknown function (DUF421) J9312_03995 PF03992 Antibiotic biosynthesis monooxygenase J9312_04000 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily J9312_04010 PF01740 STAS domain J9312_04015 PF10055 Uncharacterized small protein (DUF2292) J9312_04020 PF01027 Inhibitor of apoptosis-promoting Bax1 J9312_04025 PF01494 FAD binding domain J9312_04040 PF00872 Transposase, Mutator family J9312_04045 PF13039 Protein of unknown function (DUF3900) J9312_04045 PF13037 Domain of unknown function (DUF3898) J9312_04050 PF00667 FAD binding domain J9312_04050 PF00258 Flavodoxin J9312_04050 PF00175 Oxidoreductase NAD-binding domain J9312_04050 PF00067 Cytochrome P450 J9312_04055 PF00884 Sulfatase J9312_04060 PF00483 Nucleotidyl transferase J9312_04065 PF16363 GDP-mannose 4,6 dehydratase J9312_04070 PF03407 Nucleotide-diphospho-sugar transferase J9312_04075 PF00535 Glycosyl transferase family 2 J9312_04080 PF03407 Nucleotide-diphospho-sugar transferase J9312_04085 PF07690 Major Facilitator Superfamily J9312_04090 PF13419 Haloacid dehalogenase-like hydrolase J9312_04095 PF13520 Amino acid permease J9312_04100 PF00171 Aldehyde dehydrogenase family J9312_04105 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J9312_04110 PF00005 ABC transporter J9312_04110 PF16326 ABC transporter C-terminal domain J9312_04110 PF12848 ABC transporter J9312_04115 PF10787 Uncharacterised protein from bacillus cereus group J9312_04120 PF13411 MerR HTH family regulatory protein J9312_04125 PF07690 Major Facilitator Superfamily J9312_04135 PF00005 ABC transporter J9312_04135 PF12848 ABC transporter J9312_04140 PF00270 DEAD/DEAH box helicase J9312_04140 PF00271 Helicase conserved C-terminal domain J9312_04145 PF00583 Acetyltransferase (GNAT) family J9312_04150 PF00872 Transposase, Mutator family J9312_04155 PF00107 Zinc-binding dehydrogenase J9312_04155 PF16884 N-terminal domain of oxidoreductase J9312_04160 PF00005 ABC transporter J9312_04165 PF01032 FecCD transport family J9312_04170 PF01032 FecCD transport family J9312_04175 PF01497 Periplasmic binding protein J9312_04180 PF11486 Protein of unknown function (DUF3212) J9312_04185 PF11181 Heat induced stress protein YflT J9312_04190 PF00544 Pectate lyase J9312_04195 PF00939 Sodium:sulfate symporter transmembrane region J9312_04200 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J9312_04200 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain J9312_04205 PF12431 Transcriptional regulator J9312_04205 PF08279 HTH domain J9312_04205 PF00072 Response regulator receiver domain J9312_04210 PF03401 Tripartite tricarboxylate transporter family receptor J9312_04215 PF03600 Citrate transporter J9312_04220 PF00753 Metallo-beta-lactamase superfamily J9312_04225 PF02898 Nitric oxide synthase, oxygenase domain J9312_04230 PF00708 Acylphosphatase J9312_04235 PF03475 3-alpha domain J9312_04235 PF03473 MOSC domain J9312_04240 PF11121 Protein of unknown function (DUF2639) J9312_04250 PF11588 Protein of unknown function (DUF3243) J9312_04255 PF00557 Metallopeptidase family M24 J9312_04260 PF00367 phosphotransferase system, EIIB J9312_04260 PF02378 Phosphotransferase system, EIIC J9312_04265 PF00884 Sulfatase J9312_04275 PF09350 Domain of unknown function (DUF1992) J9312_04290 PF00367 phosphotransferase system, EIIB J9312_04290 PF02378 Phosphotransferase system, EIIC J9312_04295 PF16657 Maltogenic Amylase, C-terminal domain J9312_04295 PF00128 Alpha amylase, catalytic domain J9312_04300 PF07702 UTRA domain J9312_04300 PF00392 Bacterial regulatory proteins, gntR family J9312_04305 PF00881 Nitroreductase family J9312_04310 PF02872 5'-nucleotidase, C-terminal domain J9312_04310 PF00149 Calcineurin-like phosphoesterase J9312_04315 PF01965 DJ-1/PfpI family J9312_04320 PF07690 Major Facilitator Superfamily J9312_04325 PF06569 Protein of unknown function (DUF1128) J9312_04330 PF01451 Low molecular weight phosphotyrosine protein phosphatase J9312_04340 PF03631 Virulence factor BrkB J9312_04345 PF07690 Major Facilitator Superfamily J9312_04350 PF01699 Sodium/calcium exchanger protein J9312_04355 PF14167 YfkD-like protein J9312_04360 PF00924 Mechanosensitive ion channel J9312_04365 PF04055 Radical SAM superfamily J9312_04365 PF08756 YfkB-like domain J9312_04375 PF01522 Polysaccharide deacetylase J9312_04380 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase J9312_04380 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase J9312_04385 PF01544 CorA-like Mg2+ transporter protein J9312_04390 PF00730 HhH-GPD superfamily base excision DNA repair protein J9312_04395 PF01938 TRAM domain J9312_04395 PF05958 tRNA (Uracil-5-)-methyltransferase J9312_04400 PF14118 YfzA-like protein J9312_04405 PF01207 Dihydrouridine synthase (Dus) J9312_04420 PF00676 Dehydrogenase E1 component J9312_04425 PF02780 Transketolase, C-terminal domain J9312_04425 PF02779 Transketolase, pyrimidine binding domain J9312_04430 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) J9312_04430 PF00364 Biotin-requiring enzyme J9312_04430 PF02817 e3 binding domain J9312_04435 PF07992 Pyridine nucleotide-disulphide oxidoreductase J9312_04435 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain J9312_04440 PF01590 GAF domain J9312_04440 PF00158 Sigma-54 interaction domain J9312_04440 PF02954 Bacterial regulatory protein, Fis family J9312_04445 PF08141 Small acid-soluble spore protein H family J9312_04450 PF02694 Uncharacterised BCR, YnfA/UPF0060 family J9312_04455 PF17353 Family of unknown function (DUF5381) J9312_04460 PF17353 Family of unknown function (DUF5381) J9312_04475 PF06013 Proteins of 100 residues with WXG J9312_04480 PF11975 Family 4 glycosyl hydrolase C-terminal domain J9312_04480 PF02056 Family 4 glycosyl hydrolase J9312_04485 PF01418 Helix-turn-helix domain, rpiR family J9312_04485 PF01380 SIS domain J9312_04490 PF00367 phosphotransferase system, EIIB J9312_04490 PF02378 Phosphotransferase system, EIIC J9312_04495 PF12708 Pectate lyase superfamily protein J9312_04495 PF11962 Peptidase_G2, IMC autoproteolytic cleavage domain J9312_04500 PF00872 Transposase, Mutator family J9312_04505 PF00005 ABC transporter J9312_04505 PF00664 ABC transporter transmembrane region J9312_04510 PF00005 ABC transporter J9312_04510 PF00664 ABC transporter transmembrane region J9312_04515 PF07681 DoxX J9312_04520 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily J9312_04525 PF02311 AraC-like ligand binding domain J9312_04525 PF12833 Helix-turn-helix domain J9312_04530 PF00083 Sugar (and other) transporter J9312_04535 PF01261 Xylose isomerase-like TIM barrel J9312_04545 PF07730 Histidine kinase J9312_04550 PF00196 Bacterial regulatory proteins, luxR family J9312_04550 PF00072 Response regulator receiver domain J9312_04555 PF00005 ABC transporter J9312_04570 PF10400 Virulence activator alpha C-term J9312_04570 PF03551 Transcriptional regulator PadR-like family J9312_04575 PF01674 Lipase (class 2) J9312_04580 PF01757 Acyltransferase family J9312_04585 PF00440 Bacterial regulatory proteins, tetR family J9312_04585 PF17922 Tetracyclin repressor-like, C-terminal domain J9312_04590 PF07690 Major Facilitator Superfamily J9312_04595 PF12867 DinB superfamily J9312_04600 PF07690 Major Facilitator Superfamily J9312_04605 PF01047 MarR family J9312_04610 PF09924 Uncharacterised conserved protein (DUF2156) J9312_04610 PF03706 Lysylphosphatidylglycerol synthase TM region J9312_04615 PF01497 Periplasmic binding protein J9312_04620 PF01032 FecCD transport family J9312_04625 PF01032 FecCD transport family J9312_04630 PF02567 Phenazine biosynthesis-like protein J9312_04635 PF00881 Nitroreductase family J9312_04640 PF14151 YfhD-like protein J9312_04645 PF14152 YfhE-like protein J9312_04650 PF08338 Domain of unknown function (DUF1731) J9312_04650 PF01370 NAD dependent epimerase/dehydratase family J9312_04655 PF02631 RecX family J9312_04660 PF08838 Protein of unknown function (DUF1811) J9312_04665 PF07690 Major Facilitator Superfamily J9312_04670 PF08176 Small acid-soluble spore protein K family J9312_04675 PF14043 WVELL protein J9312_04685 PF08239 Bacterial SH3 domain J9312_04690 PF13630 SdpI/YhfL protein family J9312_04695 PF00561 alpha/beta hydrolase fold J9312_04700 PF00535 Glycosyl transferase family 2 J9312_04705 PF09586 Bacterial membrane protein YfhO J9312_04710 PF04307 LexA-binding, inner membrane-associated putative hydrolase J9312_04715 PF00730 HhH-GPD superfamily base excision DNA repair protein J9312_04715 PF14815 NUDIX domain J9312_04730 PF04259 Small, acid-soluble spore protein, gamma-type J9312_04735 PF14182 YgaB-like protein J9312_04740 PF04167 Protein of unknown function (DUF402) J9312_04745 PF00005 ABC transporter J9312_04745 PF00664 ABC transporter transmembrane region J9312_04750 PF06081 Aromatic acid exporter family member 1 J9312_04755 PF00202 Aminotransferase class-III J9312_04760 PF00578 AhpC/TSA family J9312_04765 PF01475 Ferric uptake regulator family J9312_04770 PF11023 Zinc-ribbon containing domain J9312_04775 PF14540 Nucleotidyltransferase-like J9312_04775 PF18576 Helix-turn-helix domain J9312_04875 PF07070 SpoOM protein J9312_04885 PF07875 Coat F domain J9312_04890 PF03575 Peptidase family S51 J9312_04895 PF13667 ThiC-associated domain J9312_04895 PF01964 Radical SAM ThiC family J9312_04905 PF13040 Fur-regulated basic protein B J9312_04910 PF00199 Catalase J9312_04910 PF06628 Catalase-related immune-responsive J9312_04915 PF00005 ABC transporter J9312_04920 PF09084 NMT1/THI5 like J9312_04925 PF00528 Binding-protein-dependent transport system inner membrane component J9312_04940 PF00253 Ribosomal protein S14p/S29e J9312_04950 PF01381 Helix-turn-helix J9312_04965 PF08331 Domain of unknown function (DUF1730) J9312_04970 PF12671 Putative amidase domain J9312_04975 PF00588 SpoU rRNA Methylase family J9312_04980 PF13171 Protein of unknown function (DUF4004) J9312_04985 PF04519 Polymer-forming cytoskeletal J9312_04995 PF08298 PrkA AAA domain J9312_04995 PF06798 PrkA serine protein kinase C-terminal domain J9312_05000 PF04285 Protein of unknown function (DUF444) J9312_05005 PF01047 MarR family J9312_05015 PF07690 Major Facilitator Superfamily J9312_05020 PF03358 NADPH-dependent FMN reductase J9312_05040 PF00392 Bacterial regulatory proteins, gntR family J9312_05045 PF00005 ABC transporter J9312_05050 PF00005 ABC transporter J9312_05055 PF12679 ABC-2 family transporter protein J9312_05060 PF00313 'Cold-shock' DNA-binding domain J9312_05065 PF03180 NLPA lipoprotein J9312_05070 PF07694 5TMR of 5TMR-LYT J9312_05070 PF00990 Diguanylate cyclase, GGDEF domain J9312_05075 PF00375 Sodium:dicarboxylate symporter family J9312_05080 PF14410 HNH/ENDO VII superfamily nuclease with conserved GHE residues J9312_05080 PF04740 LXG domain of WXG superfamily J9312_05080 PF14449 Pre-toxin TG J9312_05105 PF14659 Phage integrase, N-terminal SAM-like domain J9312_05105 PF00589 Phage integrase family J9312_05110 PF18106 Rolling Circle replication initiation protein N-terminal domain J9312_05110 PF02486 Replication initiation factor J9312_05140 PF12642 Conjugative transposon protein TcpC J9312_05150 PF12648 TcpE family J9312_05160 PF08960 Domain of unknown function (DUF1874) J9312_05170 PF00877 NlpC/P60 family J9312_05180 PF14729 Domain of unknown function with cystatin-like fold (DUF4467) J9312_05190 PF18801 response regulator aspartate phosphatase H, N terminal J9312_05200 PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) J9312_05215 PF00746 LPXTG cell wall anchor motif J9312_05215 PF00149 Calcineurin-like phosphoesterase J9312_05215 PF00565 Staphylococcal nuclease homologue J9312_05215 PF02872 5'-nucleotidase, C-terminal domain J9312_05220 PF04203 Sortase domain J9312_05225 PF01479 S4 domain J9312_05225 PF00849 RNA pseudouridylate synthase J9312_05230 PF17326 Family of unknown function (DUF5365) J9312_05235 PF00571 CBS domain J9312_05240 PF13419 Haloacid dehalogenase-like hydrolase J9312_05245 PF00583 Acetyltransferase (GNAT) family J9312_05245 PF00795 Carbon-nitrogen hydrolase J9312_05250 PF00202 Aminotransferase class-III J9312_05255 PF04309 Glycerol-3-phosphate responsive antiterminator J9312_05260 PF00230 Major intrinsic protein J9312_05265 PF00370 FGGY family of carbohydrate kinases, N-terminal domain J9312_05265 PF02782 FGGY family of carbohydrate kinases, C-terminal domain J9312_05270 PF01266 FAD dependent oxidoreductase J9312_05270 PF16901 C-terminal domain of alpha-glycerophosphate oxidase J9312_05275 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I J9312_05275 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III J9312_05275 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain J9312_05275 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II J9312_05280 PF07730 Histidine kinase J9312_05280 PF13185 GAF domain J9312_05285 PF00072 Response regulator receiver domain J9312_05285 PF00196 Bacterial regulatory proteins, luxR family J9312_05290 PF03358 NADPH-dependent FMN reductase J9312_05295 PF14148 YhdB-like protein J9312_05300 PF13028 Protein of unknown function (DUF3889) J9312_05305 PF01476 LysM domain J9312_05305 PF00877 NlpC/P60 family J9312_05310 PF02082 Transcriptional regulator J9312_05315 PF05552 Conserved TM helix J9312_05320 PF04293 SpoVR like protein J9312_05325 PF00245 Alkaline phosphatase J9312_05330 PF00877 NlpC/P60 family J9312_05330 PF01476 LysM domain J9312_05335 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J9312_05335 PF03466 LysR substrate binding domain J9312_05340 PF00285 Citrate synthase, C-terminal domain J9312_05350 PF13520 Amino acid permease J9312_05355 PF00209 Sodium:neurotransmitter symporter family J9312_05360 PF00155 Aminotransferase class I and II J9312_05360 PF00392 Bacterial regulatory proteins, gntR family J9312_05365 PF00583 Acetyltransferase (GNAT) family J9312_05370 PF17453 Sigma-M inhibitor J9312_05375 PF13791 Sigma factor regulator C-terminal J9312_05375 PF13800 Sigma factor regulator N-terminal J9312_05380 PF04542 Sigma-70 region 2 J9312_05380 PF08281 Sigma-70, region 4 J9312_05385 PF00248 Aldo/keto reductase family J9312_05390 PF01553 Acyltransferase J9312_05395 PF03471 Transporter associated domain J9312_05395 PF01595 Cyclin M transmembrane N-terminal domain J9312_05395 PF00571 CBS domain J9312_05400 PF13411 MerR HTH family regulatory protein J9312_05410 PF03471 Transporter associated domain J9312_05410 PF00571 CBS domain J9312_05410 PF01595 Cyclin M transmembrane N-terminal domain J9312_05415 PF02537 CrcB-like protein, Camphor Resistance (CrcB) J9312_05420 PF02537 CrcB-like protein, Camphor Resistance (CrcB) J9312_05425 PF03009 Glycerophosphoryl diester phosphodiesterase family J9312_05430 PF17444 Uncharacterized YhdX-like J9312_05435 PF00924 Mechanosensitive ion channel J9312_05440 PF02146 Sir2 family J9312_05445 PF01522 Polysaccharide deacetylase J9312_05450 PF01063 Amino-transferase class IV J9312_05455 PF03553 Na+/H+ antiporter family J9312_05460 PF00582 Universal stress protein family J9312_05470 PF00005 ABC transporter J9312_05470 PF00664 ABC transporter transmembrane region J9312_05475 PF00664 ABC transporter transmembrane region J9312_05475 PF00005 ABC transporter J9312_05480 PF13460 NAD(P)H-binding J9312_05490 PF00269 Small, acid-soluble spore proteins, alpha/beta type J9312_05495 PF17277 Family of unknown function (DUF5342) J9312_05500 PF14398 YheC/D like ATP-grasp J9312_05505 PF14398 YheC/D like ATP-grasp J9312_05510 PF04286 Protein of unknown function (DUF445) J9312_05515 PF06133 Control of competence regulator ComK, YlbF/YmcA J9312_05520 PF08713 DNA alkylation repair enzyme J9312_05530 PF04055 Radical SAM superfamily J9312_05535 PF00999 Sodium/hydrogen exchanger family J9312_05540 PF02080 TrkA-C domain J9312_05550 PF00378 Enoyl-CoA hydratase/isomerase J9312_05555 PF14120 YhzD-like protein J9312_05560 PF00005 ABC transporter J9312_05560 PF13732 Domain of unknown function (DUF4162) J9312_05570 PF00149 Calcineurin-like phosphoesterase J9312_05575 PF13514 AAA domain J9312_05580 PF01966 HD domain J9312_05585 PF14147 Sporulation protein YhaL J9312_05590 PF00872 Transposase, Mutator family J9312_05600 PF09680 Family of unknown function J9312_05605 PF09680 Family of unknown function J9312_05615 PF11667 Putative zincin peptidase J9312_05620 PF08963 Protein of unknown function (DUF1878) J9312_05625 PF01047 MarR family J9312_05630 PF12732 YtxH-like protein J9312_05640 PF17099 Tryptophan transporter TrpP J9312_05645 PF00266 Aminotransferase class-V J9312_05650 PF01230 HIT domain J9312_05655 PF00005 ABC transporter J9312_05660 PF05975 Bacterial ABC transporter protein EcsB J9312_05665 PF12787 EcsC protein family J9312_05670 PF07687 Peptidase dimerisation domain J9312_05670 PF01546 Peptidase family M20/M25/M40 J9312_05685 PF03992 Antibiotic biosynthesis monooxygenase J9312_05690 PF00905 Penicillin binding protein transpeptidase domain J9312_05690 PF00912 Transglycosylase J9312_05695 PF01208 Uroporphyrinogen decarboxylase (URO-D) J9312_05700 PF00762 Ferrochelatase J9312_05705 PF01593 Flavin containing amine oxidoreductase J9312_05710 PF17932 Tetracyclin repressor-like, C-terminal domain J9312_05710 PF00440 Bacterial regulatory proteins, tetR family J9312_05720 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III J9312_05720 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal J9312_05725 PF10086 YhfC intramembrane metalloprotease J9312_05735 PF05343 M42 glutamyl aminopeptidase J9312_05740 PF04266 ASCH domain J9312_05745 PF00375 Sodium:dicarboxylate symporter family J9312_05750 PF14149 YhfH-like protein J9312_05755 PF12706 Beta-lactamase superfamily domain J9312_05760 PF03099 Biotin/lipoate A/B protein ligase family J9312_05760 PF10437 Bacterial lipoate protein ligase C-terminus J9312_05765 PF13460 NAD(P)H-binding J9312_05770 PF00501 AMP-binding enzyme J9312_05770 PF13193 AMP-binding enzyme C-terminal domain J9312_05780 PF01435 Peptidase family M48 J9312_05780 PF16491 CAAX prenyl protease N-terminal, five membrane helices J9312_05785 PF05922 Peptidase inhibitor I9 J9312_05785 PF00082 Subtilase family J9312_05790 PF00583 Acetyltransferase (GNAT) family J9312_05795 PF08240 Alcohol dehydrogenase GroES-like domain J9312_05795 PF00107 Zinc-binding dehydrogenase J9312_05800 PF01497 Periplasmic binding protein J9312_05805 PF00300 Histidine phosphatase superfamily (branch 1) J9312_05810 PF02803 Thiolase, C-terminal domain J9312_05810 PF00108 Thiolase, N-terminal domain J9312_05815 PF13193 AMP-binding enzyme C-terminal domain J9312_05815 PF00501 AMP-binding enzyme J9312_05820 PF02632 BioY family J9312_05825 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J9312_05840 PF08858 IDEAL domain J9312_05845 PF06338 ComK protein J9312_05855 PF05901 Excalibur calcium-binding domain J9312_05860 PF00474 Sodium:solute symporter family J9312_05865 PF11755 Protein of unknown function (DUF3311) J9312_05875 PF09335 SNARE associated Golgi protein J9312_05880 PF10502 Signal peptidase, peptidase S26 J9312_05885 PF01494 FAD binding domain J9312_05890 PF01047 MarR family J9312_05900 PF07690 Major Facilitator Superfamily J9312_05935 PF05116 Sucrose-6F-phosphate phosphohydrolase J9312_05940 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family J9312_05945 PF00356 Bacterial regulatory proteins, lacI family J9312_05950 PF05145 Transition state regulatory protein AbrB J9312_05955 PF07690 Major Facilitator Superfamily J9312_05960 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle J9312_05960 PF12793 Sugar transport-related sRNA regulator N-term J9312_05965 PF03860 Domain of Unknown Function (DUF326) J9312_05970 PF02915 Rubrerythrin J9312_05975 PF12705 PD-(D/E)XK nuclease superfamily J9312_05975 PF13361 UvrD-like helicase C-terminal domain J9312_05980 PF12705 PD-(D/E)XK nuclease superfamily J9312_05980 PF00580 UvrD/REP helicase N-terminal domain J9312_05980 PF13361 UvrD-like helicase C-terminal domain J9312_05985 PF12320 Type 5 capsule protein repressor C-terminal domain J9312_05985 PF00149 Calcineurin-like phosphoesterase J9312_05990 PF13476 AAA domain J9312_06000 PF10676 Spore germination protein gerPA/gerPF J9312_06005 PF10970 Spore germination protein GerPE J9312_06015 PF10737 Spore germination protein GerPC J9312_06020 PF10803 Spore germination GerPB J9312_06025 PF10676 Spore germination protein gerPA/gerPF J9312_06030 PF09388 Spo0E like sporulation regulatory protein J9312_06035 PF08757 CotH kinase protein J9312_06040 PF01557 Fumarylacetoacetate (FAA) hydrolase family J9312_06045 PF07457 Protein of unknown function (DUF1516) J9312_06050 PF17936 Bacterial Ig domain J9312_06050 PF00082 Subtilase family J9312_06055 PF10949 Protein of unknown function (DUF2777) J9312_06060 PF00733 Asparagine synthase J9312_06060 PF13537 Glutamine amidotransferase domain J9312_06070 PF01554 MatE J9312_06075 PF02311 AraC-like ligand binding domain J9312_06075 PF12833 Helix-turn-helix domain J9312_06080 PF00356 Bacterial regulatory proteins, lacI family J9312_06085 PF01408 Oxidoreductase family, NAD-binding Rossmann fold J9312_06085 PF02894 Oxidoreductase family, C-terminal alpha/beta domain J9312_06090 PF05163 DinB family J9312_06095 PF01810 LysE type translocator J9312_06100 PF00155 Aminotransferase class I and II J9312_06100 PF00392 Bacterial regulatory proteins, gntR family J9312_06105 PF13599 Pentapeptide repeats (9 copies) J9312_06110 PF08386 TAP-like protein J9312_06110 PF00561 alpha/beta hydrolase fold J9312_06125 PF01507 Phosphoadenosine phosphosulfate reductase family J9312_06130 PF04029 2-phosphosulpholactate phosphatase J9312_06135 PF02679 (2R)-phospho-3-sulfolactate synthase (ComA) J9312_06140 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 J9312_06145 PF13378 Enolase C-terminal domain-like J9312_06145 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain J9312_06150 PF07690 Major Facilitator Superfamily J9312_06155 PF13673 Acetyltransferase (GNAT) domain J9312_06155 PF18014 Acetyltransferase (GNAT) domain J9312_06160 PF13673 Acetyltransferase (GNAT) domain J9312_06165 PF02219 Methylenetetrahydrofolate reductase J9312_06165 PF02574 Homocysteine S-methyltransferase J9312_06170 PF04461 Protein of unknown function (DUF520) J9312_06175 PF17783 CvfB-like winged helix domain J9312_06175 PF13509 S1 domain J9312_06190 PF17418 Sporulation delaying protein SdpA J9312_06195 PF03551 Transcriptional regulator PadR-like family J9312_06205 PF12650 Domain of unknown function (DUF3784) J9312_06210 PF07504 Fungalysin/Thermolysin Propeptide Motif J9312_06210 PF03413 Peptidase propeptide and YPEB domain J9312_06210 PF01447 Thermolysin metallopeptidase, catalytic domain J9312_06210 PF02868 Thermolysin metallopeptidase, alpha-helical domain J9312_06215 PF02645 Uncharacterised protein, DegV family COG1307 J9312_06220 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) J9312_06220 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 J9312_06225 PF12690 Intracellular proteinase inhibitor J9312_06230 PF12758 Protein of unknown function (DUF3813) J9312_06245 PF00326 Prolyl oligopeptidase family J9312_06250 PF01883 Iron-sulfur cluster assembly protein J9312_06260 PF01565 FAD binding domain J9312_06270 PF01118 Semialdehyde dehydrogenase, NAD binding domain J9312_06270 PF02774 Semialdehyde dehydrogenase, dimerisation domain J9312_06275 PF01960 ArgJ family J9312_06280 PF00696 Amino acid kinase family J9312_06285 PF00202 Aminotransferase class-III J9312_06290 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain J9312_06290 PF00117 Glutamine amidotransferase class-I J9312_06295 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain J9312_06295 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain J9312_06300 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain J9312_06300 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain J9312_06310 PF14168 YjzC-like protein J9312_06315 PF11151 Protein of unknown function (DUF2929) J9312_06330 PF02608 ABC transporter substrate-binding protein PnrA-like J9312_06335 PF10815 ComZ J9312_06345 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III J9312_06345 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal J9312_06350 PF00109 Beta-ketoacyl synthase, N-terminal domain J9312_06350 PF02801 Beta-ketoacyl synthase, C-terminal domain J9312_06355 PF10026 Predicted Zn-dependent protease (DUF2268) J9312_06360 PF00005 ABC transporter J9312_06360 PF08352 Oligopeptide/dipeptide transporter, C-terminal region J9312_06365 PF00005 ABC transporter J9312_06365 PF08352 Oligopeptide/dipeptide transporter, C-terminal region J9312_06370 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle J9312_06375 PF00528 Binding-protein-dependent transport system inner membrane component J9312_06380 PF00528 Binding-protein-dependent transport system inner membrane component J9312_06380 PF12911 N-terminal TM domain of oligopeptide transport permease C J9312_06385 PF12227 Protein of unknown function (DUF3603) J9312_06390 PF00579 tRNA synthetases class I (W and Y) J9312_06395 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle J9312_06400 PF00528 Binding-protein-dependent transport system inner membrane component J9312_06405 PF12911 N-terminal TM domain of oligopeptide transport permease C J9312_06405 PF00528 Binding-protein-dependent transport system inner membrane component J9312_06410 PF08352 Oligopeptide/dipeptide transporter, C-terminal region J9312_06410 PF00005 ABC transporter J9312_06415 PF00005 ABC transporter J9312_06415 PF08352 Oligopeptide/dipeptide transporter, C-terminal region J9312_06420 PF07690 Major Facilitator Superfamily J9312_06425 PF13508 Acetyltransferase (GNAT) domain J9312_06430 PF03960 ArsC family J9312_06435 PF03741 Integral membrane protein TerC family J9312_06445 PF05389 Negative regulator of genetic competence (MecA) J9312_06455 PF06054 Competence protein CoiA-like family J9312_06460 PF01432 Peptidase family M3 J9312_06460 PF08439 Oligopeptidase F J9312_06475 PF01152 Bacterial-like globin J9312_06480 PF01464 Transglycosylase SLT domain J9312_06485 PF01928 CYTH domain J9312_06495 PF04607 Region found in RelA / SpoT proteins J9312_06500 PF01513 ATP-NAD kinase J9312_06505 PF00849 RNA pseudouridylate synthase J9312_06510 PF00149 Calcineurin-like phosphoesterase J9312_06515 PF02254 TrkA-N domain J9312_06515 PF02080 TrkA-C domain J9312_06515 PF00999 Sodium/hydrogen exchanger family J9312_06520 PF03070 TENA/THI-4/PQQC family J9312_06525 PF02581 Thiamine monophosphate synthase J9312_06530 PF01266 FAD dependent oxidoreductase J9312_06535 PF02597 ThiS family J9312_06540 PF05690 Thiazole biosynthesis protein ThiG J9312_06545 PF00899 ThiF family J9312_06550 PF08543 Phosphomethylpyrimidine kinase J9312_06560 PF14153 Spore coat protein CotO J9312_06565 PF10612 Spore coat protein Z J9312_06570 PF10612 Spore coat protein Z J9312_06575 PF07552 Spore Coat Protein X and V domain J9312_06590 PF07098 Protein of unknown function (DUF1360) J9312_06605 PF14069 Stage VI sporulation protein F J9312_06610 PF00580 UvrD/REP helicase N-terminal domain J9312_06610 PF13361 UvrD-like helicase C-terminal domain J9312_06625 PF13673 Acetyltransferase (GNAT) domain J9312_06635 PF00756 Putative esterase J9312_06640 PF01053 Cys/Met metabolism PLP-dependent enzyme J9312_06645 PF01053 Cys/Met metabolism PLP-dependent enzyme J9312_06650 PF13302 Acetyltransferase (GNAT) domain J9312_06655 PF05684 Protein of unknown function (DUF819) J9312_06685 PF01381 Helix-turn-helix J9312_06720 PF00534 Glycosyl transferases group 1 J9312_06765 PF18801 response regulator aspartate phosphatase H, N terminal J9312_06770 PF14411 A nuclease of the HNH/ENDO VII superfamily with conserved LHH J9312_06770 PF04740 LXG domain of WXG superfamily J9312_06780 PF00872 Transposase, Mutator family J9312_06785 PF13302 Acetyltransferase (GNAT) domain J9312_06795 PF04073 Aminoacyl-tRNA editing domain J9312_06800 PF13783 Domain of unknown function (DUF4177) J9312_06805 PF14154 Domain of unknown function (DUF4306) J9312_06810 PF01040 UbiA prenyltransferase family J9312_06820 PF11738 Protein of unknown function (DUF3298) J9312_06820 PF01522 Polysaccharide deacetylase J9312_06820 PF13739 Deacetylase PdaC J9312_06825 PF10901 Protein of unknown function (DUF2690) J9312_06830 PF14070 Putative motility protein J9312_06835 PF10026 Predicted Zn-dependent protease (DUF2268) J9312_06840 PF10990 Protein of unknown function (DUF2809) J9312_06845 PF14172 Domain of unknown function (DUF4309) J9312_06850 PF04879 Molybdopterin oxidoreductase Fe4S4 domain J9312_06850 PF00384 Molybdopterin oxidoreductase J9312_06850 PF01568 Molydopterin dinucleotide binding domain J9312_06850 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region J9312_06850 PF12838 4Fe-4S dicluster domain J9312_06855 PF07849 Protein of unknown function (DUF1641) J9312_06860 PF11611 Domain of unknown function (DUF4352) J9312_06865 PF00293 NUDIX domain J9312_06875 PF00067 Cytochrome P450 J9312_06880 PF04101 Glycosyltransferase family 28 C-terminal domain J9312_06890 PF02602 Uroporphyrinogen-III synthase HemD J9312_06895 PF03649 Uncharacterised protein family (UPF0014) J9312_06900 PF00005 ABC transporter J9312_06905 PF13536 Putative multidrug resistance efflux transporter J9312_06915 PF07849 Protein of unknown function (DUF1641) J9312_06920 PF07992 Pyridine nucleotide-disulphide oxidoreductase J9312_06925 PF02614 Glucuronate isomerase J9312_06935 PF02615 Malate/L-lactate dehydrogenase J9312_06940 PF00107 Zinc-binding dehydrogenase J9312_06940 PF08240 Alcohol dehydrogenase GroES-like domain J9312_06945 PF03786 D-mannonate dehydratase (UxuA) J9312_06950 PF00106 short chain dehydrogenase J9312_06955 PF07690 Major Facilitator Superfamily J9312_06960 PF00356 Bacterial regulatory proteins, lacI family J9312_06965 PF01232 Mannitol dehydrogenase Rossmann domain J9312_06965 PF08125 Mannitol dehydrogenase C-terminal domain J9312_06970 PF08666 SAF domain J9312_06970 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus J9312_06975 PF01925 Sulfite exporter TauE/SafE J9312_06980 PF05163 DinB family J9312_06985 PF00004 ATPase family associated with various cellular activities (AAA) J9312_06990 PF18801 response regulator aspartate phosphatase H, N terminal J9312_07005 PF01510 N-acetylmuramoyl-L-alanine amidase J9312_07005 PF01476 LysM domain J9312_07005 PF01471 Putative peptidoglycan binding domain J9312_07010 PF08000 Bacterial PH domain J9312_07015 PF05908 Poly-gamma-glutamate hydrolase J9312_07020 PF05067 Manganese containing catalase J9312_07025 PF06114 IrrE N-terminal-like domain J9312_07030 PF01381 Helix-turn-helix J9312_07045 PF01695 IstB-like ATP binding protein J9312_07060 PF17356 Phage-like element PBSX protein XtrA J9312_07065 PF08281 Sigma-70, region 4 J9312_07070 PF10668 Phage terminase small subunit J9312_07070 PF03592 Terminase small subunit J9312_07075 PF04466 Phage terminase large subunit J9312_07075 PF17288 Terminase RNAseH like domain J9312_07080 PF04860 Phage portal protein J9312_07085 PF14550 Putative phage serine protease XkdF J9312_07090 PF05065 Phage capsid family J9312_07095 PF11436 Protein of unknown function (DUF3199) J9312_07100 PF12206 Domain of unknown function (DUF3599) J9312_07105 PF04883 Bacteriophage HK97-gp10, putative tail-component J9312_07120 PF17482 Phage tail sheath C-terminal domain J9312_07120 PF17481 Phage tail sheath protein beta-sandwich domain J9312_07120 PF04984 Phage tail sheath protein subtilisin-like domain J9312_07125 PF09393 Phage tail tube protein J9312_07130 PF08890 Phage XkdN-like tail assembly chaperone protein, TAC J9312_07140 PF01464 Transglycosylase SLT domain J9312_07140 PF01464 Transglycosylase SLT domain J9312_07140 PF01464 Transglycosylase SLT domain J9312_07155 PF10844 Protein of unknown function (DUF2577) J9312_07160 PF10934 Protein of unknown function (DUF2634) J9312_07165 PF04865 Baseplate J-like protein J9312_07170 PF10076 Uncharacterised protein conserved in bacteria (DUF2313) J9312_07185 PF09636 XkdW protein J9312_07190 PF09693 Phage uncharacterised protein (Phage_XkdX) J9312_07200 PF10779 Haemolysin XhlA J9312_07205 PF04688 SPP1 phage holin J9312_07210 PF01476 LysM domain J9312_07210 PF01471 Putative peptidoglycan binding domain J9312_07210 PF01510 N-acetylmuramoyl-L-alanine amidase J9312_07220 PF14185 Antitoxin SpoIISB, type II toxin-antitoxin system J9312_07225 PF14171 Toxin SpoIISA, type II toxin-antitoxin system J9312_07230 PF01384 Phosphate transporter family J9312_07235 PF01865 Protein of unknown function DUF47 J9312_07245 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily J9312_07250 PF13231 Dolichyl-phosphate-mannose-protein mannosyltransferase J9312_07255 PF00535 Glycosyl transferase family 2 J9312_07265 PF13180 PDZ domain J9312_07270 PF03807 NADP oxidoreductase coenzyme F420-dependent J9312_07270 PF14748 Pyrroline-5-carboxylate reductase dimerisation J9312_07275 PF04951 D-aminopeptidase J9312_07280 PF00528 Binding-protein-dependent transport system inner membrane component J9312_07285 PF00528 Binding-protein-dependent transport system inner membrane component J9312_07285 PF12911 N-terminal TM domain of oligopeptide transport permease C J9312_07290 PF08352 Oligopeptide/dipeptide transporter, C-terminal region J9312_07290 PF00005 ABC transporter J9312_07295 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle J9312_07300 PF02016 LD-carboxypeptidase N-terminal domain J9312_07300 PF17676 LD-carboxypeptidase C-terminal domain J9312_07305 PF13378 Enolase C-terminal domain-like J9312_07305 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain J9312_07310 PF00877 NlpC/P60 family J9312_07315 PF08352 Oligopeptide/dipeptide transporter, C-terminal region J9312_07315 PF00005 ABC transporter J9312_07320 PF10282 Lactonase, 7-bladed beta-propeller J9312_07330 PF03061 Thioesterase superfamily J9312_07335 PF00175 Oxidoreductase NAD-binding domain J9312_07335 PF00042 Globin J9312_07335 PF00970 Oxidoreductase FAD-binding domain J9312_07345 PF04239 Protein of unknown function (DUF421) J9312_07350 PF12867 DinB superfamily J9312_07355 PF13302 Acetyltransferase (GNAT) domain J9312_07360 PF00893 Small Multidrug Resistance protein J9312_07365 PF00893 Small Multidrug Resistance protein J9312_07370 PF00551 Formyl transferase J9312_07370 PF01842 ACT domain J9312_07375 PF01472 PUA domain J9312_07375 PF00696 Amino acid kinase family J9312_07380 PF00171 Aldehyde dehydrogenase family J9312_07385 PF02566 OsmC-like protein J9312_07390 PF01047 MarR family J9312_07395 PF02566 OsmC-like protein J9312_07405 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region J9312_07410 PF08267 Cobalamin-independent synthase, N-terminal domain J9312_07410 PF01717 Cobalamin-independent synthase, Catalytic domain J9312_07415 PF00082 Subtilase family J9312_07420 PF01740 STAS domain J9312_07425 PF02361 Cobalt transport protein J9312_07430 PF00005 ABC transporter J9312_07435 PF09819 ABC-type cobalt transport system, permease component J9312_07440 PF07615 YKOF-related Family J9312_07445 PF00486 Transcriptional regulatory protein, C terminal J9312_07445 PF00072 Response regulator receiver domain J9312_07450 PF00672 HAMP domain J9312_07450 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J9312_07450 PF00512 His Kinase A (phospho-acceptor) domain J9312_07455 PF03413 Peptidase propeptide and YPEB domain J9312_07460 PF03413 Peptidase propeptide and YPEB domain J9312_07465 PF11132 Transcriptional regulator protein (SplA) J9312_07470 PF00571 CBS domain J9312_07470 PF03448 MgtE intracellular N domain J9312_07470 PF01769 Divalent cation transporter J9312_07475 PF13411 MerR HTH family regulatory protein J9312_07490 PF01047 MarR family J9312_07495 PF06925 Monogalactosyldiacylglycerol (MGDG) synthase J9312_07505 PF00149 Calcineurin-like phosphoesterase J9312_07515 PF00535 Glycosyl transferase family 2 J9312_07520 PF01068 ATP dependent DNA ligase domain J9312_07525 PF02735 Ku70/Ku80 beta-barrel domain J9312_07530 PF00563 EAL domain J9312_07530 PF00990 Diguanylate cyclase, GGDEF domain J9312_07530 PF03707 Bacterial signalling protein N terminal repeat J9312_07535 PF09335 SNARE associated Golgi protein J9312_07540 PF03741 Integral membrane protein TerC family J9312_07545 PF04542 Sigma-70 region 2 J9312_07550 PF12791 Anti-sigma factor N-terminus J9312_07555 PF00269 Small, acid-soluble spore proteins, alpha/beta type J9312_07560 PF08876 Domain of unknown function (DUF1836) J9312_07565 PF01435 Peptidase family M48 J9312_07570 PF02386 Cation transport protein J9312_07585 PF01757 Acyltransferase family J9312_07590 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J9312_07590 PF00512 His Kinase A (phospho-acceptor) domain J9312_07590 PF00989 PAS fold J9312_07590 PF13188 PAS domain J9312_07590 PF13426 PAS domain J9312_07595 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain J9312_07595 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain J9312_07605 PF01008 Initiation factor 2 subunit family J9312_07610 PF01636 Phosphotransferase enzyme family J9312_07615 PF00795 Carbon-nitrogen hydrolase J9312_07620 PF00155 Aminotransferase class I and II J9312_07625 PF02788 Ribulose bisphosphate carboxylase large chain, N-terminal domain J9312_07625 PF00016 Ribulose bisphosphate carboxylase large chain, catalytic domain J9312_07635 PF00596 Class II Aldolase and Adducin N-terminal domain J9312_07640 PF03079 ARD/ARD' family J9312_07645 PF06803 Protein of unknown function (DUF1232) J9312_07650 PF09388 Spo0E like sporulation regulatory protein J9312_07660 PF00512 His Kinase A (phospho-acceptor) domain J9312_07660 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J9312_07660 PF02743 Cache domain J9312_07665 PF01047 MarR family J9312_07670 PF00691 OmpA family J9312_07670 PF13677 Membrane MotB of proton-channel complex MotA/MotB J9312_07675 PF01618 MotA/TolQ/ExbB proton channel family J9312_07680 PF10431 C-terminal, D2-small domain, of ClpB protein J9312_07680 PF17871 AAA lid domain J9312_07680 PF07724 AAA domain (Cdc48 subfamily) J9312_07680 PF00004 ATPase family associated with various cellular activities (AAA) J9312_07690 PF06508 Queuosine biosynthesis protein QueC J9312_07695 PF01242 6-pyruvoyl tetrahydropterin synthase J9312_07700 PF04055 Radical SAM superfamily J9312_07705 PF14489 QueF-like protein J9312_07710 PF01638 HxlR-like helix-turn-helix J9312_07770 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) J9312_07780 PF11514 Protein of unknown function (DUF3219) J9312_07785 PF09953 Uncharacterized protein conserved in bacteria (DUF2187) J9312_07795 PF07486 Cell Wall Hydrolase J9312_07800 PF01943 Polysaccharide biosynthesis protein J9312_07805 PF00578 AhpC/TSA family J9312_07820 PF01321 Creatinase/Prolidase N-terminal domain J9312_07820 PF00557 Metallopeptidase family M24 J9312_07825 PF00356 Bacterial regulatory proteins, lacI family J9312_07825 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family J9312_07830 PF00874 PRD domain J9312_07830 PF03123 CAT RNA binding domain J9312_07835 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 J9312_07835 PF00367 phosphotransferase system, EIIB J9312_07835 PF02378 Phosphotransferase system, EIIC J9312_07840 PF00381 PTS HPr component phosphorylation site J9312_07845 PF05524 PEP-utilising enzyme, N-terminal J9312_07845 PF00391 PEP-utilising enzyme, mobile domain J9312_07845 PF02896 PEP-utilising enzyme, TIM barrel domain J9312_07850 PF11132 Transcriptional regulator protein (SplA) J9312_07860 PF00583 Acetyltransferase (GNAT) family J9312_07865 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J9312_07865 PF02743 Cache domain J9312_07865 PF00672 HAMP domain J9312_07870 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase J9312_07870 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase J9312_07875 PF00872 Transposase, Mutator family J9312_07880 PF00188 Cysteine-rich secretory protein family J9312_07885 PF03717 Penicillin-binding Protein dimerisation domain J9312_07885 PF00905 Penicillin binding protein transpeptidase domain J9312_07890 PF00512 His Kinase A (phospho-acceptor) domain J9312_07890 PF00989 PAS fold J9312_07890 PF08447 PAS fold J9312_07890 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J9312_07895 PF00155 Aminotransferase class I and II J9312_07905 PF01584 CheW-like domain J9312_07905 PF00072 Response regulator receiver domain J9312_07910 PF14177 YkyB-like protein J9312_07915 PF07690 Major Facilitator Superfamily J9312_07920 PF03734 L,D-transpeptidase catalytic domain J9312_07920 PF01476 LysM domain J9312_07925 PF00149 Calcineurin-like phosphoesterase J9312_07925 PF10518 TAT (twin-arginine translocation) pathway signal sequence J9312_07935 PF00563 EAL domain J9312_07935 PF10388 EAL-domain associated signalling protein domain J9312_07940 PF08796 Protein of unknown function (DUF1797) J9312_07945 PF04308 Ribonuclease H-like J9312_07950 PF14156 Antirepressor AbbA J9312_07960 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J9312_07960 PF03466 LysR substrate binding domain J9312_07965 PF00258 Flavodoxin J9312_07975 PF00258 Flavodoxin J9312_07980 PF08503 Tetrahydrodipicolinate succinyltransferase N-terminal J9312_07980 PF00132 Bacterial transferase hexapeptide (six repeats) J9312_07980 PF14602 Hexapeptide repeat of succinyl-transferase J9312_07985 PF01546 Peptidase family M20/M25/M40 J9312_07985 PF07687 Peptidase dimerisation domain J9312_07990 PF03698 Uncharacterised protein family (UPF0180) J9312_07995 PF00924 Mechanosensitive ion channel J9312_08000 PF10417 C-terminal domain of 1-Cys peroxiredoxin J9312_08000 PF00578 AhpC/TSA family J9312_08005 PF00578 AhpC/TSA family J9312_08020 PF12804 MobA-like NTP transferase domain J9312_08025 PF00899 ThiF family J9312_08030 PF00994 Probable molybdopterin binding domain J9312_08030 PF03453 MoeA N-terminal region (domain I and II) J9312_08030 PF03454 MoeA C-terminal region (domain IV) J9312_08035 PF03205 Molybdopterin guanine dinucleotide synthesis protein B J9312_08040 PF02391 MoaE protein J9312_08045 PF02597 ThiS family J9312_08050 PF00664 ABC transporter transmembrane region J9312_08050 PF00005 ABC transporter J9312_08055 PF00005 ABC transporter J9312_08055 PF00664 ABC transporter transmembrane region J9312_08060 PF04893 Yip1 domain J9312_08065 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion J9312_08070 PF00005 ABC transporter J9312_08075 PF12704 MacB-like periplasmic core domain J9312_08075 PF02687 FtsX-like permease family J9312_08080 PF00455 DeoR C terminal sensor domain J9312_08080 PF08220 DeoR-like helix-turn-helix domain J9312_08085 PF00294 pfkB family carbohydrate kinase J9312_08090 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 J9312_08090 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit J9312_08095 PF10502 Signal peptidase, peptidase S26 J9312_08105 PF00005 ABC transporter J9312_08105 PF12848 ABC transporter J9312_08110 PF02558 Ketopantoate reductase PanE/ApbA J9312_08110 PF08546 Ketopantoate reductase PanE/ApbA C terminal J9312_08115 PF02073 Thermophilic metalloprotease (M29) J9312_08120 PF17447 Uncharacterized YkpC-like J9312_08130 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin J9312_08130 PF18277 AbrB C-terminal domain J9312_08135 PF00989 PAS fold J9312_08135 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J9312_08135 PF00512 His Kinase A (phospho-acceptor) domain J9312_08140 PF06094 Gamma-glutamyl cyclotransferase, AIG2-like J9312_08145 PF02080 TrkA-C domain J9312_08145 PF02254 TrkA-N domain J9312_08150 PF13382 Adenine deaminase C-terminal domain J9312_08150 PF01979 Amidohydrolase family J9312_08155 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain J9312_08155 PF17770 Ribonuclease J C-terminal domain J9312_08155 PF00753 Metallo-beta-lactamase superfamily J9312_08160 PF07288 Protein of unknown function (DUF1447) J9312_08170 PF01327 Polypeptide deformylase J9312_08185 PF00676 Dehydrogenase E1 component J9312_08190 PF02780 Transketolase, C-terminal domain J9312_08190 PF02779 Transketolase, pyrimidine binding domain J9312_08195 PF02817 e3 binding domain J9312_08195 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) J9312_08195 PF00364 Biotin-requiring enzyme J9312_08200 PF07992 Pyridine nucleotide-disulphide oxidoreductase J9312_08200 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain J9312_08210 PF13790 SR1 protein J9312_08215 PF01276 Orn/Lys/Arg decarboxylase, major domain J9312_08215 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain J9312_08220 PF05256 Uncharacterised protein family (UPF0223) J9312_08225 PF06335 Protein of unknown function (DUF1054) J9312_08235 PF00459 Inositol monophosphatase family J9312_08240 PF00583 Acetyltransferase (GNAT) family J9312_08245 PF04072 Leucine carboxyl methyltransferase J9312_08250 PF07504 Fungalysin/Thermolysin Propeptide Motif J9312_08250 PF03413 Peptidase propeptide and YPEB domain J9312_08250 PF01447 Thermolysin metallopeptidase, catalytic domain J9312_08250 PF02868 Thermolysin metallopeptidase, alpha-helical domain J9312_08265 PF04542 Sigma-70 region 2 J9312_08265 PF08281 Sigma-70, region 4 J9312_08270 PF13490 Putative zinc-finger J9312_08280 PF17259 Family of unknown function (DUF5325) J9312_08285 PF14492 Elongation Factor G, domain II J9312_08285 PF00009 Elongation factor Tu GTP binding domain J9312_08285 PF03144 Elongation factor Tu domain 2 J9312_08285 PF00679 Elongation factor G C-terminus J9312_08290 PF14036 YlaH-like protein J9312_08295 PF09963 Uncharacterized protein conserved in bacteria (DUF2197) J9312_08300 PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) J9312_08305 PF13638 PIN domain J9312_08305 PF02562 PhoH-like protein J9312_08315 PF04960 Glutaminase J9312_08320 PF07408 Protein of unknown function (DUF1507) J9312_08325 PF01098 Cell cycle protein J9312_08330 PF02436 Conserved carboxylase domain J9312_08330 PF00682 HMGL-like J9312_08330 PF00289 Biotin carboxylase, N-terminal domain J9312_08330 PF00364 Biotin-requiring enzyme J9312_08330 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain J9312_08330 PF02785 Biotin carboxylase C-terminal domain J9312_08335 PF02628 Cytochrome oxidase assembly protein J9312_08340 PF01040 UbiA prenyltransferase family J9312_08345 PF00116 Cytochrome C oxidase subunit II, periplasmic domain J9312_08345 PF02790 Cytochrome C oxidase subunit II, transmembrane domain J9312_08345 PF00034 Cytochrome c J9312_08350 PF00115 Cytochrome C and Quinol oxidase polypeptide I J9312_08355 PF00510 Cytochrome c oxidase subunit III J9312_08360 PF03626 Prokaryotic Cytochrome C oxidase subunit IV J9312_08365 PF09678 Cytochrome c oxidase caa3 assembly factor (Caa3_CtaG) J9312_08370 PF08868 YugN-like family J9312_08375 PF00571 CBS domain J9312_08380 PF00188 Cysteine-rich secretory protein family J9312_08380 PF14504 CAP-associated N-terminal J9312_08385 PF14071 Putative coat protein J9312_08390 PF14003 YlbE-like protein J9312_08395 PF06133 Control of competence regulator ComK, YlbF/YmcA J9312_08400 PF09902 Uncharacterized protein conserved in bacteria (DUF2129) J9312_08410 PF01467 Cytidylyltransferase-like J9312_08415 PF07670 Nucleoside recognition J9312_08420 PF01734 Patatin-like phospholipase J9312_08425 PF13180 PDZ domain J9312_08425 PF05362 Lon protease (S16) C-terminal proteolytic domain J9312_08430 PF05636 HIGH Nucleotidyl Transferase J9312_08440 PF02620 Large ribosomal RNA subunit accumulation protein YceD J9312_08445 PF01783 Ribosomal L32p protein family J9312_08455 PF00583 Acetyltransferase (GNAT) family J9312_08460 PF02558 Ketopantoate reductase PanE/ApbA J9312_08460 PF08546 Ketopantoate reductase PanE/ApbA C terminal J9312_08465 PF10079 Bacillithiol biosynthesis BshC J9312_08470 PF02381 MraZ protein, putative antitoxin-like J9312_08475 PF01795 MraW methylase family J9312_08485 PF03793 PASTA domain J9312_08485 PF00905 Penicillin binding protein transpeptidase domain J9312_08485 PF03717 Penicillin-binding Protein dimerisation domain J9312_08490 PF03793 PASTA domain J9312_08490 PF03717 Penicillin-binding Protein dimerisation domain J9312_08490 PF00905 Penicillin binding protein transpeptidase domain J9312_08495 PF01225 Mur ligase family, catalytic domain J9312_08495 PF02875 Mur ligase family, glutamate ligase domain J9312_08495 PF08245 Mur ligase middle domain J9312_08500 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 J9312_08500 PF00953 Glycosyl transferase family 4 J9312_08505 PF08245 Mur ligase middle domain J9312_08505 PF02875 Mur ligase family, glutamate ligase domain J9312_08510 PF01098 Cell cycle protein J9312_08515 PF03033 Glycosyltransferase family 28 N-terminal domain J9312_08515 PF04101 Glycosyltransferase family 28 C-terminal domain J9312_08520 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain J9312_08520 PF01565 FAD binding domain J9312_08525 PF08478 POTRA domain, FtsQ-type J9312_08530 PF05949 Bacterial protein of unknown function (DUF881) J9312_08535 PF05949 Bacterial protein of unknown function (DUF881) J9312_08540 PF06947 Protein of unknown function (DUF1290) J9312_08545 PF02491 SHS2 domain inserted in FTSA J9312_08550 PF12327 FtsZ family, C-terminal domain J9312_08550 PF00091 Tubulin/FtsZ family, GTPase domain J9312_08555 PF05922 Peptidase inhibitor I9 J9312_08555 PF00082 Subtilase family J9312_08560 PF03419 Sporulation factor SpoIIGA J9312_08565 PF04542 Sigma-70 region 2 J9312_08565 PF04545 Sigma-70, region 4 J9312_08570 PF04542 Sigma-70 region 2 J9312_08570 PF04539 Sigma-70 region 3 J9312_08570 PF04545 Sigma-70, region 4 J9312_08575 PF00005 ABC transporter J9312_08580 PF07687 Peptidase dimerisation domain J9312_08580 PF01546 Peptidase family M20/M25/M40 J9312_08585 PF05239 PRC-barrel domain J9312_08590 PF02578 Multi-copper polyphenol oxidoreductase laccase J9312_08595 PF01168 Alanine racemase, N-terminal domain J9312_08600 PF04472 Cell division protein SepF J9312_08605 PF02325 YGGT family J9312_08610 PF01479 S4 domain J9312_08610 PF17774 Putative RNA-binding domain in YlmH J9312_08615 PF05103 DivIVA protein J9312_08620 PF08264 Anticodon-binding domain of tRNA J9312_08620 PF00133 tRNA synthetases class I (I, L, M and V) J9312_08625 PF01258 Prokaryotic dksA/traR C4-type zinc finger J9312_08630 PF01252 Signal peptidase (SPase) II J9312_08635 PF00849 RNA pseudouridylate synthase J9312_08635 PF01479 S4 domain J9312_08640 PF00156 Phosphoribosyl transferase domain J9312_08645 PF00860 Permease family J9312_08650 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain J9312_08650 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain J9312_08655 PF01979 Amidohydrolase family J9312_08660 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain J9312_08660 PF00117 Glutamine amidotransferase class-I J9312_08665 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain J9312_08665 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain J9312_08665 PF02142 MGS-like domain J9312_08670 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B J9312_08670 PF00175 Oxidoreductase NAD-binding domain J9312_08675 PF01180 Dihydroorotate dehydrogenase J9312_08680 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family J9312_08685 PF00156 Phosphoribosyl transferase domain J9312_08690 PF01507 Phosphoadenosine phosphosulfate reductase family J9312_08695 PF01384 Phosphate transporter family J9312_08700 PF01747 ATP-sulfurylase J9312_08700 PF14306 PUA-like domain J9312_08710 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases J9312_08715 PF01903 CbiX J9312_08725 PF05670 NFACT protein RNA binding domain J9312_08730 PF00690 Cation transporter/ATPase, N-terminus J9312_08730 PF00689 Cation transporting ATPase, C-terminus J9312_08735 PF08340 Domain of unknown function (DUF1732) J9312_08735 PF03755 YicC-like family, N-terminal region J9312_08740 PF04025 Domain of unknown function (DUF370) J9312_08745 PF00625 Guanylate kinase J9312_08750 PF01192 RNA polymerase Rpb6 J9312_08755 PF04127 DNA / pantothenate metabolism flavoprotein J9312_08755 PF02441 Flavoprotein J9312_08760 PF00271 Helicase conserved C-terminal domain J9312_08760 PF18074 Primosomal protein N C-terminal domain J9312_08760 PF18319 PriA DNA helicase Cys-rich region (CRR) domain J9312_08760 PF04851 Type III restriction enzyme, res subunit J9312_08760 PF17764 3′ DNA-binding domain (3′BD) J9312_08765 PF01327 Polypeptide deformylase J9312_08770 PF02911 Formyl transferase, C-terminal domain J9312_08770 PF00551 Formyl transferase J9312_08775 PF01029 NusB family J9312_08775 PF01189 16S rRNA methyltransferase RsmB/F J9312_08780 PF04055 Radical SAM superfamily J9312_08790 PF03793 PASTA domain J9312_08790 PF00069 Protein kinase domain J9312_08795 PF03193 RsgA GTPase J9312_08795 PF16745 RsgA N-terminal domain J9312_08800 PF00834 Ribulose-phosphate 3 epimerase family J9312_08805 PF04265 Thiamin pyrophosphokinase, vitamin B1 binding domain J9312_08805 PF04263 Thiamin pyrophosphokinase, catalytic domain J9312_08810 PF08183 Stage V sporulation protein family J9312_08815 PF00830 Ribosomal L28 family J9312_08820 PF03780 Asp23 family, cell envelope-related function J9312_08825 PF02734 DAK2 domain J9312_08825 PF13684 Dihydroxyacetone kinase family J9312_08830 PF01842 ACT domain J9312_08830 PF03315 Serine dehydratase beta chain J9312_08835 PF03313 Serine dehydratase alpha chain J9312_08840 PF00270 DEAD/DEAH box helicase J9312_08840 PF00271 Helicase conserved C-terminal domain J9312_08840 PF17191 RecG wedge domain J9312_08845 PF03061 Thioesterase superfamily J9312_08850 PF02504 Fatty acid synthesis protein J9312_08855 PF00698 Acyl transferase domain J9312_08865 PF00550 Phosphopantetheine attachment site J9312_08870 PF14622 Ribonuclease-III-like J9312_08870 PF00035 Double-stranded RNA binding motif J9312_08875 PF02463 RecF/RecN/SMC N terminal domain J9312_08875 PF06470 SMC proteins Flexible Hinge Domain J9312_08880 PF02881 SRP54-type protein, helical bundle domain J9312_08880 PF00448 SRP54-type protein, GTPase domain J9312_08885 PF02369 Bacterial Ig-like domain (group 1) J9312_08890 PF04297 Putative helix-turn-helix protein, YlxM / p13 like J9312_08895 PF02978 Signal peptide binding domain J9312_08895 PF02881 SRP54-type protein, helical bundle domain J9312_08895 PF00448 SRP54-type protein, GTPase domain J9312_08900 PF00886 Ribosomal protein S16 J9312_08910 PF11068 YlqD protein J9312_08915 PF05239 PRC-barrel domain J9312_08915 PF01782 RimM N-terminal domain J9312_08920 PF01746 tRNA (Guanine-1)-methyltransferase J9312_08925 PF01245 Ribosomal protein L19 J9312_08930 PF01926 50S ribosome-binding GTPase J9312_08935 PF01351 Ribonuclease HII J9312_08945 PF01312 FlhB HrpN YscU SpaS Family J9312_08950 PF08442 ATP-grasp domain J9312_08950 PF00549 CoA-ligase J9312_08955 PF02629 CoA binding domain J9312_08955 PF00549 CoA-ligase J9312_08960 PF02481 DNA recombination-mediator protein A J9312_08965 PF01131 DNA topoisomerase J9312_08965 PF01751 Toprim domain J9312_08965 PF01396 Topoisomerase DNA binding C4 zinc finger J9312_08970 PF01134 Glucose inhibited division protein A J9312_08975 PF02899 Phage integrase, N-terminal SAM-like domain J9312_08975 PF00589 Phage integrase family J9312_08980 PF00227 Proteasome subunit J9312_08985 PF10431 C-terminal, D2-small domain, of ClpB protein J9312_08985 PF07724 AAA domain (Cdc48 subfamily) J9312_08985 PF00004 ATPase family associated with various cellular activities (AAA) J9312_08990 PF06018 CodY GAF-like domain J9312_08990 PF08222 CodY helix-turn-helix domain J9312_08995 PF00460 Flagella basal body rod protein J9312_09000 PF00460 Flagella basal body rod protein J9312_09000 PF06429 Flagellar basal body rod FlgEFG protein C-terminal J9312_09005 PF02049 Flagellar hook-basal body complex protein FliE J9312_09010 PF01514 Secretory protein of YscJ/FliF family J9312_09010 PF08345 Flagellar M-ring protein C-terminal J9312_09015 PF01706 FliG C-terminal domain J9312_09015 PF14841 FliG middle domain J9312_09015 PF14842 FliG N-terminal domain J9312_09020 PF02108 Flagellar assembly protein FliH J9312_09025 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain J9312_09025 PF18269 T3SS EscN ATPase C-terminal domain J9312_09025 PF02874 ATP synthase alpha/beta family, beta-barrel domain J9312_09030 PF02050 Flagellar FliJ protein J9312_09035 PF03448 MgtE intracellular N domain J9312_09040 PF02120 Flagellar hook-length control protein FliK J9312_09045 PF03963 Flagellar hook capping protein - N-terminal region J9312_09050 PF00460 Flagella basal body rod protein J9312_09050 PF06429 Flagellar basal body rod FlgEFG protein C-terminal J9312_09055 PF06289 Flagellar and Swarming motility proteins J9312_09060 PF03748 Flagellar basal body-associated protein FliL J9312_09065 PF02154 Flagellar motor switch protein FliM J9312_09065 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term J9312_09070 PF04509 CheC-like family J9312_09070 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term J9312_09075 PF00072 Response regulator receiver domain J9312_09080 PF04347 Flagellar biosynthesis protein, FliO J9312_09085 PF00813 FliP family J9312_09090 PF01313 Bacterial export proteins, family 3 J9312_09095 PF01311 Bacterial export proteins, family 1 J9312_09100 PF01312 FlhB HrpN YscU SpaS Family J9312_09105 PF00771 FHIPEP family J9312_09110 PF00448 SRP54-type protein, GTPase domain J9312_09115 PF10609 NUBPL iron-transfer P-loop NTPase J9312_09120 PF01339 CheB methylesterase J9312_09120 PF00072 Response regulator receiver domain J9312_09125 PF01584 CheW-like domain J9312_09125 PF02895 Signal transducing histidine kinase, homodimeric domain J9312_09125 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J9312_09125 PF01627 Hpt domain J9312_09125 PF07194 P2 response regulator binding domain J9312_09130 PF01584 CheW-like domain J9312_09135 PF04509 CheC-like family J9312_09140 PF03975 CheD chemotactic sensory transduction J9312_09145 PF04542 Sigma-70 region 2 J9312_09145 PF04539 Sigma-70 region 3 J9312_09145 PF04545 Sigma-70, region 4 J9312_09155 PF00318 Ribosomal protein S2 J9312_09160 PF00889 Elongation factor TS J9312_09165 PF00696 Amino acid kinase family J9312_09170 PF01765 Ribosome recycling factor J9312_09175 PF01255 Putative undecaprenyl diphosphate synthase J9312_09185 PF13288 DXP reductoisomerase C-terminal domain J9312_09185 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain J9312_09185 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase J9312_09190 PF17820 PDZ domain J9312_09190 PF02163 Peptidase family M50 J9312_09195 PF03129 Anticodon binding domain J9312_09195 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) J9312_09195 PF04073 Aminoacyl-tRNA editing domain J9312_09200 PF14480 DNA polymerase III polC-type N-terminus I J9312_09200 PF11490 DNA polymerase III polC-type N-terminus II J9312_09200 PF07733 Bacterial DNA polymerase III alpha NTPase domain J9312_09200 PF17657 Bacterial DNA polymerase III alpha subunit finger domain J9312_09200 PF14579 Helix-hairpin-helix motif J9312_09200 PF00929 Exonuclease J9312_09200 PF02811 PHP domain J9312_09205 PF02576 RimP N-terminal domain J9312_09205 PF17384 RimP C-terminal SH3 domain J9312_09210 PF13184 NusA-like KH domain J9312_09210 PF08529 NusA N-terminal domain J9312_09210 PF00575 S1 RNA binding domain J9312_09215 PF04296 Protein of unknown function (DUF448) J9312_09220 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family J9312_09225 PF00009 Elongation factor Tu GTP binding domain J9312_09225 PF11987 Translation-initiation factor 2 J9312_09225 PF04760 Translation initiation factor IF-2, N-terminal region J9312_09230 PF04456 Protein of unknown function (DUF503) J9312_09235 PF02033 Ribosome-binding factor A J9312_09240 PF16198 tRNA pseudouridylate synthase B C-terminal domain J9312_09240 PF01509 TruB family pseudouridylate synthase (N terminal domain) J9312_09245 PF06574 FAD synthetase J9312_09245 PF01687 Riboflavin kinase J9312_09250 PF00312 Ribosomal protein S15 J9312_09255 PF00575 S1 RNA binding domain J9312_09255 PF03725 3' exoribonuclease family, domain 2 J9312_09255 PF01138 3' exoribonuclease family, domain 1 J9312_09255 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain J9312_09255 PF00013 KH domain J9312_09260 PF01522 Polysaccharide deacetylase J9312_09265 PF00675 Insulinase (Peptidase family M16) J9312_09265 PF05193 Peptidase M16 inactive domain J9312_09270 PF05239 PRC-barrel domain J9312_09275 PF01262 Alanine dehydrogenase/PNT, C-terminal domain J9312_09275 PF16924 Dipicolinate synthase subunit A N-terminal domain J9312_09280 PF02441 Flavoprotein J9312_09285 PF01118 Semialdehyde dehydrogenase, NAD binding domain J9312_09285 PF02774 Semialdehyde dehydrogenase, dimerisation domain J9312_09290 PF00696 Amino acid kinase family J9312_09290 PF13840 ACT domain J9312_09295 PF00701 Dihydrodipicolinate synthetase family J9312_09300 PF00753 Metallo-beta-lactamase superfamily J9312_09300 PF17770 Ribonuclease J C-terminal domain J9312_09300 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain J9312_09305 PF00574 Clp protease J9312_09310 PF14035 YlzJ-like protein J9312_09315 PF17854 FtsK alpha domain J9312_09315 PF09397 Ftsk gamma domain J9312_09315 PF01580 FtsK/SpoIIIE family J9312_09320 PF00392 Bacterial regulatory proteins, gntR family J9312_09320 PF07702 UTRA domain J9312_09325 PF07690 Major Facilitator Superfamily J9312_09330 PF05193 Peptidase M16 inactive domain J9312_09335 PF00675 Insulinase (Peptidase family M16) J9312_09335 PF05193 Peptidase M16 inactive domain J9312_09345 PF11588 Protein of unknown function (DUF3243) J9312_09350 PF11868 Protein of unknown function (DUF3388) J9312_09355 PF13464 Domain of unknown function (DUF4115) J9312_09360 PF01066 CDP-alcohol phosphatidyltransferase J9312_09365 PF02464 Competence-damaged protein J9312_09365 PF18146 Damage-inducible protein CinA KH domain J9312_09365 PF00994 Probable molybdopterin binding domain J9312_09370 PF00154 recA bacterial DNA recombination protein J9312_09375 PF00144 Beta-lactamase J9312_09380 PF01966 HD domain J9312_09380 PF00013 KH domain J9312_09380 PF12072 Domain of unknown function (DUF3552) J9312_09385 PF13277 YmdB-like protein J9312_09390 PF04232 Stage V sporulation protein S (SpoVS) J9312_09395 PF08240 Alcohol dehydrogenase GroES-like domain J9312_09395 PF00107 Zinc-binding dehydrogenase J9312_09400 PF00155 Aminotransferase class I and II J9312_09405 PF04055 Radical SAM superfamily J9312_09405 PF01938 TRAM domain J9312_09405 PF00919 Uncharacterized protein family UPF0004 J9312_09410 PF06133 Control of competence regulator ComK, YlbF/YmcA J9312_09415 PF10628 Outer spore coat protein E (CotE) J9312_09420 PF01624 MutS domain I J9312_09420 PF05192 MutS domain III J9312_09420 PF05190 MutS family domain IV J9312_09420 PF00488 MutS domain V J9312_09420 PF05188 MutS domain II J9312_09425 PF01119 DNA mismatch repair protein, C-terminal domain J9312_09425 PF08676 MutL C terminal dimerisation domain J9312_09445 PF02368 Bacterial Ig-like domain (group 2) J9312_09450 PF01695 IstB-like ATP binding protein J9312_09455 PF00665 Integrase core domain J9312_09535 PF14184 Regulatory protein YrvL J9312_09545 PF13977 BetI-type transcriptional repressor, C-terminal J9312_09545 PF00440 Bacterial regulatory proteins, tetR family J9312_09560 PF00082 Subtilase family J9312_09570 PF05908 Poly-gamma-glutamate hydrolase J9312_09575 PF02566 OsmC-like protein J9312_09580 PF00893 Small Multidrug Resistance protein J9312_09585 PF00893 Small Multidrug Resistance protein J9312_09595 PF12788 YmaF family J9312_09605 PF17209 Hfq protein J9312_09610 PF14157 YmzC-like protein J9312_09620 PF07972 NrdI Flavodoxin like J9312_09625 PF02867 Ribonucleotide reductase, barrel domain J9312_09625 PF00317 Ribonucleotide reductase, all-alpha domain J9312_09625 PF08343 Ribonucleotide reductase N-terminal J9312_09630 PF00268 Ribonucleotide reductase, small chain J9312_09640 PF01520 N-acetylmuramoyl-L-alanine amidase J9312_09640 PF05036 Sporulation related domain J9312_09645 PF00004 ATPase family associated with various cellular activities (AAA) J9312_09645 PF17866 AAA lid domain J9312_09650 PF16360 GTP-binding GTPase Middle Region J9312_09650 PF01926 50S ribosome-binding GTPase J9312_09650 PF13167 GTP-binding GTPase N-terminal J9312_09655 PF06838 Methionine gamma-lyase J9312_09660 PF13411 MerR HTH family regulatory protein J9312_09665 PF03951 Glutamine synthetase, beta-Grasp domain J9312_09665 PF00120 Glutamine synthetase, catalytic domain J9312_09675 PF18593 CdiI immunity protein J9312_09685 PF04740 LXG domain of WXG superfamily J9312_09685 PF14411 A nuclease of the HNH/ENDO VII superfamily with conserved LHH J9312_09720 PF00872 Transposase, Mutator family J9312_09730 PF13302 Acetyltransferase (GNAT) domain J9312_09745 PF13443 Cro/C1-type HTH DNA-binding domain J9312_09780 PF04616 Glycosyl hydrolases family 43 J9312_09780 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain J9312_09785 PF00480 ROK family J9312_09790 PF01261 Xylose isomerase-like TIM barrel J9312_09795 PF00370 FGGY family of carbohydrate kinases, N-terminal domain J9312_09795 PF02782 FGGY family of carbohydrate kinases, C-terminal domain J9312_09805 PF00565 Staphylococcal nuclease homologue J9312_09810 PF00083 Sugar (and other) transporter J9312_09815 PF00842 Alanine racemase, C-terminal domain J9312_09815 PF01168 Alanine racemase, N-terminal domain J9312_09830 PF00692 dUTPase J9312_09845 PF00303 Thymidylate synthase J9312_09855 PF15493 Domain of unknown function, YrpD J9312_09860 PF14037 YoqO-like protein J9312_09870 PF02416 mttA/Hcf106 family J9312_09880 PF08327 Activator of Hsp90 ATPase homolog 1-like protein J9312_09905 PF13761 Domain of unknown function (DUF4166) J9312_09910 PF14158 YndJ-like protein J9312_09920 PF05908 Poly-gamma-glutamate hydrolase J9312_09925 PF10710 Protein of unknown function (DUF2512) J9312_09930 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily J9312_09935 PF01726 LexA DNA binding domain J9312_09935 PF00717 Peptidase S24-like J9312_09940 PF01476 LysM domain J9312_09945 PF00239 Resolvase, N terminal domain J9312_09950 PF05979 Bacterial protein of unknown function (DUF896) J9312_09955 PF00456 Transketolase, thiamine diphosphate binding domain J9312_09955 PF02780 Transketolase, C-terminal domain J9312_09955 PF02779 Transketolase, pyrimidine binding domain J9312_09960 PF10747 Sporulation inhibitor of replication protein SirA J9312_09965 PF03672 Uncharacterised protein family (UPF0154) J9312_09970 PF09388 Spo0E like sporulation regulatory protein J9312_09975 PF02683 Cytochrome C biogenesis protein transmembrane region J9312_09980 PF00072 Response regulator receiver domain J9312_09985 PF07301 Protein of unknown function (DUF1453) J9312_09990 PF11084 Protein of unknown function (DUF2621) J9312_10000 PF08179 Small acid-soluble spore protein P family J9312_10010 PF00330 Aconitase family (aconitate hydratase) J9312_10010 PF00694 Aconitase C-terminal domain J9312_10015 PF00578 AhpC/TSA family J9312_10020 PF13040 Fur-regulated basic protein B J9312_10025 PF08177 Small acid-soluble spore protein N family J9312_10035 PF03061 Thioesterase superfamily J9312_10045 PF01521 Iron-sulphur cluster biosynthesis J9312_10050 PF02660 Glycerol-3-phosphate acyltransferase J9312_10055 PF13380 CoA binding domain J9312_10060 PF00204 DNA gyrase B J9312_10060 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J9312_10060 PF00986 DNA gyrase B subunit, carboxyl terminus J9312_10060 PF01751 Toprim domain J9312_10065 PF03989 DNA gyrase C-terminal domain, beta-propeller J9312_10065 PF00521 DNA gyrase/topoisomerase IV, subunit A J9312_10075 PF01235 Sodium:alanine symporter family J9312_10080 PF00942 Cellulose binding domain J9312_10080 PF00150 Cellulase (glycosyl hydrolase family 5) J9312_10085 PF17452 Uncharacterized YnfE-like J9312_10090 PF17189 Glycosyl hydrolase family 30 beta sandwich domain J9312_10100 PF04138 GtrA-like protein J9312_10105 PF00483 Nucleotidyl transferase J9312_10110 PF09335 SNARE associated Golgi protein J9312_10120 PF01039 Carboxyl transferase domain J9312_10125 PF00378 Enoyl-CoA hydratase/isomerase J9312_10130 PF00682 HMGL-like J9312_10135 PF00364 Biotin-requiring enzyme J9312_10140 PF02785 Biotin carboxylase C-terminal domain J9312_10140 PF00289 Biotin carboxylase, N-terminal domain J9312_10140 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain J9312_10145 PF13193 AMP-binding enzyme C-terminal domain J9312_10145 PF00501 AMP-binding enzyme J9312_10150 PF02770 Acyl-CoA dehydrogenase, middle domain J9312_10150 PF02771 Acyl-CoA dehydrogenase, N-terminal domain J9312_10150 PF00441 Acyl-CoA dehydrogenase, C-terminal domain J9312_10155 PF17329 Family of unknown function (DUF5367) J9312_10160 PF02638 Glycosyl hydrolase-like 10 J9312_10165 PF07098 Protein of unknown function (DUF1360) J9312_10175 PF13193 AMP-binding enzyme C-terminal domain J9312_10175 PF00668 Condensation domain J9312_10175 PF00550 Phosphopantetheine attachment site J9312_10175 PF00501 AMP-binding enzyme J9312_10180 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family J9312_10185 PF01263 Aldose 1-epimerase J9312_10190 PF01554 MatE J9312_10195 PF16800 IseA DL-endopeptidase inhibitor J9312_10210 PF00589 Phage integrase family J9312_10215 PF12728 Helix-turn-helix domain J9312_10225 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J9312_10225 PF03466 LysR substrate binding domain J9312_10230 PF08240 Alcohol dehydrogenase GroES-like domain J9312_10230 PF00107 Zinc-binding dehydrogenase J9312_10235 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster J9312_10235 PF07992 Pyridine nucleotide-disulphide oxidoreductase J9312_10240 PF01493 GXGXG motif J9312_10240 PF00310 Glutamine amidotransferases class-II J9312_10240 PF04898 Glutamate synthase central domain J9312_10240 PF01645 Conserved region in glutamate synthase J9312_10245 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J9312_10245 PF03466 LysR substrate binding domain J9312_10250 PF01472 PUA domain J9312_10250 PF00696 Amino acid kinase family J9312_10255 PF14748 Pyrroline-5-carboxylate reductase dimerisation J9312_10255 PF03807 NADP oxidoreductase coenzyme F420-dependent J9312_10260 PF02334 Replication terminator protein J9312_10265 PF00106 short chain dehydrogenase J9312_10270 PF06103 Bacterial protein of unknown function (DUF948) J9312_10280 PF13302 Acetyltransferase (GNAT) domain J9312_10295 PF00005 ABC transporter J9312_10305 PF07690 Major Facilitator Superfamily J9312_10315 PF04239 Protein of unknown function (DUF421) J9312_10320 PF13396 Phospholipase_D-nuclease N-terminal J9312_10320 PF13091 PLD-like domain J9312_10325 PF00872 Transposase, Mutator family J9312_10355 PF13302 Acetyltransferase (GNAT) domain J9312_10375 PF04740 LXG domain of WXG superfamily J9312_10375 PF14411 A nuclease of the HNH/ENDO VII superfamily with conserved LHH J9312_10380 PF09346 SMI1 / KNR4 family (SUKH-1) J9312_10385 PF01593 Flavin containing amine oxidoreductase J9312_10390 PF01588 Putative tRNA binding domain J9312_10395 PF07883 Cupin domain J9312_10395 PF12833 Helix-turn-helix domain J9312_10400 PF00583 Acetyltransferase (GNAT) family J9312_10405 PF13305 Tetracyclin repressor-like, C-terminal domain J9312_10405 PF00440 Bacterial regulatory proteins, tetR family J9312_10410 PF00753 Metallo-beta-lactamase superfamily J9312_10415 PF06445 GyrI-like small molecule binding domain J9312_10420 PF08279 HTH domain J9312_10420 PF13280 WYL domain J9312_10430 PF01022 Bacterial regulatory protein, arsR family J9312_10440 PF04238 Protein of unknown function (DUF420) J9312_10445 PF18846 Bacterial archaeo-eukaryotic release factor family 5 J9312_10455 PF02016 LD-carboxypeptidase N-terminal domain J9312_10455 PF17676 LD-carboxypeptidase C-terminal domain J9312_10460 PF00487 Fatty acid desaturase J9312_10465 PF07730 Histidine kinase J9312_10470 PF00196 Bacterial regulatory proteins, luxR family J9312_10470 PF00072 Response regulator receiver domain J9312_10475 PF01476 LysM domain J9312_10475 PF06725 3D domain J9312_10480 PF00270 DEAD/DEAH box helicase J9312_10480 PF00271 Helicase conserved C-terminal domain J9312_10480 PF00570 HRDC domain J9312_10480 PF16124 RecQ zinc-binding J9312_10480 PF09382 RQC domain J9312_10490 PF02525 Flavodoxin-like fold J9312_10495 PF01258 Prokaryotic dksA/traR C4-type zinc finger J9312_10510 PF00011 Hsp20/alpha crystallin family J9312_10525 PF08000 Bacterial PH domain J9312_10535 PF00171 Aldehyde dehydrogenase family J9312_10540 PF13243 Squalene-hopene cyclase C-terminal domain J9312_10540 PF13249 Squalene-hopene cyclase N-terminal domain J9312_10545 PF02777 Iron/manganese superoxide dismutases, C-terminal domain J9312_10545 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain J9312_10550 PF00209 Sodium:neurotransmitter symporter family J9312_10555 PF01758 Sodium Bile acid symporter family J9312_10560 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) J9312_10560 PF00364 Biotin-requiring enzyme J9312_10560 PF02817 e3 binding domain J9312_10565 PF02779 Transketolase, pyrimidine binding domain J9312_10565 PF00676 Dehydrogenase E1 component J9312_10565 PF16870 2-oxoglutarate dehydrogenase C-terminal J9312_10570 PF00092 von Willebrand factor type A domain J9312_10575 PF07728 AAA domain (dynein-related subfamily) J9312_10580 PF00080 Copper/zinc superoxide dismutase (SODC) J9312_10580 PF13627 Prokaryotic lipoprotein-attachment site J9312_10585 PF01476 LysM domain J9312_10585 PF00877 NlpC/P60 family J9312_10590 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase J9312_10595 PF02457 DisA bacterial checkpoint controller nucleotide-binding J9312_10595 PF10372 Bacterial membrane-spanning protein N-terminus J9312_10600 PF01554 MatE J9312_10605 PF01740 STAS domain J9312_10610 PF02585 GlcNAc-PI de-N-acetylase J9312_10615 PF08830 Protein of unknown function (DUF1806) J9312_10625 PF00892 EamA-like transporter family J9312_10645 PF14552 Tautomerase enzyme J9312_10650 PF01638 HxlR-like helix-turn-helix J9312_10655 PF00881 Nitroreductase family J9312_10665 PF01471 Putative peptidoglycan binding domain J9312_10665 PF17820 PDZ domain J9312_10665 PF03572 Peptidase family S41 J9312_10670 PF08241 Methyltransferase domain J9312_10680 PF02557 D-alanyl-D-alanine carboxypeptidase J9312_10685 PF01048 Phosphorylase superfamily J9312_10695 PF14191 YodL-like J9312_10700 PF01569 PAP2 superfamily J9312_10705 PF14162 YozD-like protein J9312_10720 PF06855 YozE SAM-like fold J9312_10725 PF14122 YokU-like protein, putative antitoxin J9312_10730 PF12544 Lysine-2,3-aminomutase J9312_10735 PF00583 Acetyltransferase (GNAT) family J9312_10740 PF01546 Peptidase family M20/M25/M40 J9312_10740 PF07687 Peptidase dimerisation domain J9312_10745 PF01144 Coenzyme A transferase J9312_10750 PF01144 Coenzyme A transferase J9312_10755 PF00202 Aminotransferase class-III J9312_10770 PF00583 Acetyltransferase (GNAT) family J9312_10775 PF00535 Glycosyl transferase family 2 J9312_10790 PF12996 DUF based on E. rectale Gene description (DUF3880) J9312_10795 PF02333 Phytase J9312_10800 PF02719 Polysaccharide biosynthesis protein J9312_10805 PF01641 SelR domain J9312_10810 PF01625 Peptide methionine sulfoxide reductase J9312_10815 PF01047 MarR family J9312_10820 PF01554 MatE J9312_10825 PF17431 Uncharacterized YmpT-like J9312_10830 PF09911 Uncharacterized protein conserved in bacteria (DUF2140) J9312_10835 PF13472 GDSL-like Lipase/Acylhydrolase family J9312_10840 PF02630 SCO1/SenC J9312_10845 PF10751 Protein of unknown function (DUF2535) J9312_10850 PF00585 C-terminal regulatory domain of Threonine dehydratase J9312_10850 PF00291 Pyridoxal-phosphate dependent enzyme J9312_10855 PF08461 Ribonuclease R winged-helix domain J9312_10855 PF00158 Sigma-54 interaction domain J9312_10860 PF03006 Haemolysin-III related J9312_10870 PF00186 Dihydrofolate reductase J9312_10875 PF04608 Phosphatidylglycerophosphatase A J9312_10880 PF14005 YpjP-like protein J9312_10885 PF04445 Putative SAM-dependent methyltransferase J9312_10890 PF06491 Disulphide isomerase J9312_10895 PF00920 Dehydratase family J9312_10900 PF08712 Scaffold protein Nfu/NifU N terminal J9312_10900 PF13769 Virulence factor J9312_10905 PF01966 HD domain J9312_10910 PF00255 Glutathione peroxidase J9312_10915 PF04204 Homoserine O-succinyltransferase J9312_10920 PF06925 Monogalactosyldiacylglycerol (MGDG) synthase J9312_10920 PF00534 Glycosyl transferases group 1 J9312_10930 PF00313 'Cold-shock' DNA-binding domain J9312_10940 PF10819 Protein of unknown function (DUF2564) J9312_10945 PF10782 Zinc-finger J9312_10950 PF13456 Reverse transcriptase-like J9312_10955 PF02592 Putative vitamin uptake transporter J9312_10960 PF13456 Reverse transcriptase-like J9312_10970 PF01367 5'-3' exonuclease, C-terminal SAM fold J9312_10970 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain J9312_10980 PF10752 Protein of unknown function (DUF2533) J9312_10985 PF00350 Dynamin family J9312_10995 PF04140 Isoprenylcysteine carboxyl methyltransferase (ICMT) family J9312_11000 PF00195 Chalcone and stilbene synthases, N-terminal domain J9312_11000 PF02797 Chalcone and stilbene synthases, C-terminal domain J9312_11005 PF00860 Permease family J9312_11010 PF00156 Phosphoribosyl transferase domain J9312_11015 PF02074 Carboxypeptidase Taq (M32) metallopeptidase J9312_11020 PF03812 2-keto-3-deoxygluconate permease J9312_11025 PF01081 KDPG and KHG aldolase J9312_11030 PF00294 pfkB family carbohydrate kinase J9312_11035 PF00356 Bacterial regulatory proteins, lacI family J9312_11040 PF04962 KduI/IolB family J9312_11050 PF13307 Helicase C-terminal domain J9312_11060 PF14139 YpzG-like protein J9312_11065 PF02926 THUMP domain J9312_11065 PF01170 Putative RNA methylase family UPF0020 J9312_11075 PF05103 DivIVA protein J9312_11080 PF06908 YspA SLOG family J9312_11085 PF11122 Inner spore coat protein D J9312_11100 PF00270 DEAD/DEAH box helicase J9312_11100 PF00271 Helicase conserved C-terminal domain J9312_11100 PF09369 Domain of unknown function (DUF1998) J9312_11105 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 J9312_11115 PF14179 YppG-like protein J9312_11120 PF14178 YppF-like protein J9312_11125 PF08807 Bacterial domain of unknown function (DUF1798) J9312_11130 PF17522 Family of unknown function (DUF5446) J9312_11140 PF10720 Protein of unknown function (DUF2515) J9312_11145 PF03838 Recombination protein U J9312_11150 PF00905 Penicillin binding protein transpeptidase domain J9312_11150 PF00912 Transglycosylase J9312_11160 PF10576 Iron-sulfur binding domain of endonuclease III J9312_11160 PF00633 Helix-hairpin-helix motif J9312_11160 PF00730 HhH-GPD superfamily base excision DNA repair protein J9312_11165 PF07261 Replication initiation and membrane attachment J9312_11170 PF00152 tRNA synthetases class II (D, K and N) J9312_11170 PF01336 OB-fold nucleic acid binding domain J9312_11175 PF00155 Aminotransferase class I and II J9312_11180 PF17881 Domain of unknown function (DUF5590) J9312_11180 PF03413 Peptidase propeptide and YPEB domain J9312_11185 PF14084 Protein of unknown function (DUF4264) J9312_11190 PF00929 Exonuclease J9312_11190 PF04851 Type III restriction enzyme, res subunit J9312_11190 PF13307 Helicase C-terminal domain J9312_11195 PF02261 Aspartate decarboxylase J9312_11200 PF02569 Pantoate-beta-alanine ligase J9312_11205 PF02548 Ketopantoate hydroxymethyltransferase J9312_11210 PF02237 Biotin protein ligase C terminal domain J9312_11210 PF08279 HTH domain J9312_11210 PF03099 Biotin/lipoate A/B protein ligase family J9312_11215 PF01743 Poly A polymerase head domain J9312_11215 PF12627 Probable RNA and SrmB- binding site of polymerase A J9312_11215 PF13735 tRNA nucleotidyltransferase domain 2 putative J9312_11220 PF13439 Glycosyltransferase Family 4 J9312_11220 PF00534 Glycosyl transferases group 1 J9312_11225 PF02585 GlcNAc-PI de-N-acetylase J9312_11230 PF02142 MGS-like domain J9312_11235 PF05173 Dihydrodipicolinate reductase, C-terminus J9312_11235 PF01113 Dihydrodipicolinate reductase, N-terminus J9312_11240 PF03819 MazG nucleotide pyrophosphohydrolase domain J9312_11245 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) J9312_11245 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 J9312_11250 PF09577 Sporulation protein YpjB (SpoYpjB) J9312_11255 PF07187 Protein of unknown function (DUF1405) J9312_11260 PF00032 Cytochrome b(C-terminal)/b6/petD J9312_11260 PF13442 Cytochrome C oxidase, cbb3-type, subunit III J9312_11265 PF00033 Cytochrome b/b6/petB J9312_11270 PF00355 Rieske [2Fe-2S] domain J9312_11275 PF10673 Protein of unknown function (DUF2487) J9312_11280 PF08858 IDEAL domain J9312_11280 PF08864 UPF0302 domain J9312_11290 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) J9312_11295 PF02153 Prephenate dehydrogenase J9312_11295 PF01842 ACT domain J9312_11300 PF00155 Aminotransferase class I and II J9312_11305 PF00290 Tryptophan synthase alpha chain J9312_11310 PF00291 Pyridoxal-phosphate dependent enzyme J9312_11315 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase J9312_11320 PF00218 Indole-3-glycerol phosphate synthase J9312_11325 PF02885 Glycosyl transferase family, helical bundle domain J9312_11325 PF00591 Glycosyl transferase family, a/b domain J9312_11330 PF04715 Anthranilate synthase component I, N terminal region J9312_11330 PF00425 chorismate binding enzyme J9312_11335 PF07736 Chorismate mutase type I J9312_11340 PF01761 3-dehydroquinate synthase J9312_11345 PF01264 Chorismate synthase J9312_11350 PF01739 CheR methyltransferase, SAM binding domain J9312_11350 PF03705 CheR methyltransferase, all-alpha domain J9312_11355 PF00334 Nucleoside diphosphate kinase J9312_11360 PF00348 Polyprenyl synthetase J9312_11365 PF01209 ubiE/COQ5 methyltransferase family J9312_11370 PF07307 Heptaprenyl diphosphate synthase (HEPPP synthase) subunit 1 J9312_11375 PF02081 Tryptophan RNA-binding attenuator protein J9312_11380 PF01227 GTP cyclohydrolase I J9312_11385 PF00216 Bacterial DNA-binding protein J9312_11390 PF09547 Stage IV sporulation protein A (spore_IV_A) J9312_11400 PF10966 Protein of unknown function (DUF2768) J9312_11405 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus J9312_11405 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus J9312_11410 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal J9312_11410 PF01926 50S ribosome-binding GTPase J9312_11420 PF14045 YIEGIA protein J9312_11430 PF14140 YpzI-like protein J9312_11440 PF01070 FMN-dependent dehydrogenase J9312_11445 PF00575 S1 RNA binding domain J9312_11450 PF02224 Cytidylate kinase J9312_11455 PF17313 Family of unknown function (DUF5359) J9312_11460 PF07238 PilZ domain J9312_11460 PF12945 Flagellar protein YcgR J9312_11465 PF03413 Peptidase propeptide and YPEB domain J9312_11465 PF14620 YpeB sporulation J9312_11470 PF07486 Cell Wall Hydrolase J9312_11470 PF01471 Putative peptidoglycan binding domain J9312_11475 PF13367 PrsW family intramembrane metalloprotease J9312_11485 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase J9312_11485 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain J9312_11490 PF05389 Negative regulator of genetic competence (MecA) J9312_11495 PF00149 Calcineurin-like phosphoesterase J9312_11500 PF10864 Protein of unknown function (DUF2663) J9312_11505 PF01476 LysM domain J9312_11510 PF02517 CPBP intramembrane metalloprotease J9312_11515 PF00270 DEAD/DEAH box helicase J9312_11515 PF00271 Helicase conserved C-terminal domain J9312_11520 PF14493 Helix-turn-helix domain J9312_11530 PF12822 ECF transporter, substrate-specific component J9312_11535 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain J9312_11535 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain J9312_11535 PF01842 ACT domain J9312_11540 PF01487 Type I 3-dehydroquinase J9312_11550 PF04542 Sigma-70 region 2 J9312_11550 PF08281 Sigma-70, region 4 J9312_11555 PF00672 HAMP domain J9312_11555 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J9312_11555 PF18698 Histidine kinase sensor domain J9312_11555 PF00512 His Kinase A (phospho-acceptor) domain J9312_11555 PF00989 PAS fold J9312_11560 PF00486 Transcriptional regulatory protein, C terminal J9312_11560 PF00072 Response regulator receiver domain J9312_11565 PF01578 Cytochrome C assembly protein J9312_11570 PF05140 ResB-like family J9312_11575 PF00578 AhpC/TSA family J9312_11580 PF00849 RNA pseudouridylate synthase J9312_11580 PF01479 S4 domain J9312_11585 PF07670 Nucleoside recognition J9312_11590 PF07670 Nucleoside recognition J9312_11595 PF07943 Penicillin-binding protein 5, C-terminal domain J9312_11595 PF00768 D-alanyl-D-alanine carboxypeptidase J9312_11600 PF13047 Protein of unknown function (DUF3907) J9312_11605 PF04079 Segregation and condensation complex subunit ScpB J9312_11610 PF02616 Segregation and condensation protein ScpA J9312_11615 PF03745 Domain of unknown function (DUF309) J9312_11620 PF00583 Acetyltransferase (GNAT) family J9312_11625 PF00885 6,7-dimethyl-8-ribityllumazine synthase J9312_11630 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase J9312_11630 PF00925 GTP cyclohydrolase II J9312_11635 PF00677 Lumazine binding domain J9312_11640 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region J9312_11640 PF01872 RibD C-terminal domain J9312_11650 PF10502 Signal peptidase, peptidase S26 J9312_11660 PF09855 Nucleic-acid-binding protein containing Zn-ribbon domain (DUF2082) J9312_11665 PF10676 Spore germination protein gerPA/gerPF J9312_11710 PF00872 Transposase, Mutator family J9312_11715 PF02810 SEC-C motif J9312_11730 PF18801 response regulator aspartate phosphatase H, N terminal J9312_11740 PF00872 Transposase, Mutator family J9312_11790 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD J9312_11800 PF06207 Protein of unknown function (DUF1002) J9312_11805 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain J9312_11805 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain J9312_11810 PF03323 Bacillus/Clostridium GerA spore germination protein J9312_11815 PF14097 Stage V sporulation protein AE1 J9312_11820 PF03862 SpoVAC/SpoVAEB sporulation membrane protein J9312_11825 PF07451 Stage V sporulation protein AD (SpoVAD) J9312_11830 PF03862 SpoVAC/SpoVAEB sporulation membrane protein J9312_11835 PF13782 Stage V sporulation protein AB J9312_11840 PF12164 Stage V sporulation protein AA J9312_11845 PF04545 Sigma-70, region 4 J9312_11845 PF04542 Sigma-70 region 2 J9312_11845 PF04539 Sigma-70 region 3 J9312_11850 PF13581 Histidine kinase-like ATPase domain J9312_11855 PF01740 STAS domain J9312_11860 PF00768 D-alanyl-D-alanine carboxypeptidase J9312_11860 PF07943 Penicillin-binding protein 5, C-terminal domain J9312_11865 PF01048 Phosphorylase superfamily J9312_11870 PF01676 Metalloenzyme superfamily J9312_11875 PF00589 Phage integrase family J9312_11875 PF02899 Phage integrase, N-terminal SAM-like domain J9312_11880 PF14004 Protein of unknown function (DUF4227) J9312_11885 PF01475 Ferric uptake regulator family J9312_11890 PF01944 Stage II sporulation protein M J9312_11900 PF00390 Malic enzyme, N-terminal domain J9312_11900 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain J9312_11900 PF03949 Malic enzyme, NAD binding domain J9312_11905 PF03553 Na+/H+ antiporter family J9312_11910 PF00206 Lyase J9312_11910 PF10415 Fumarase C C-terminus J9312_11915 PF00710 Asparaginase, N-terminal J9312_11915 PF17763 Glutaminase/Asparaginase C-terminal domain J9312_11920 PF01381 Helix-turn-helix J9312_11930 PF00293 NUDIX domain J9312_11935 PF13072 Mother cell inhibitor of FtsZ J9312_11940 PF00248 Aldo/keto reductase family J9312_11945 PF13025 Protein of unknown function (DUF3886) J9312_11950 PF12146 Serine aminopeptidase, S33 J9312_11955 PF10827 Protein of unknown function (DUF2552) J9312_11960 PF01521 Iron-sulphur cluster biosynthesis J9312_11965 PF04229 GrpB protein J9312_11965 PF13673 Acetyltransferase (GNAT) domain J9312_11970 PF03992 Antibiotic biosynthesis monooxygenase J9312_11975 PF00583 Acetyltransferase (GNAT) family J9312_11980 PF08863 YolD-like protein J9312_11985 PF11799 impB/mucB/samB family C-terminal domain J9312_11985 PF00817 impB/mucB/samB family J9312_11990 PF14164 YqzH-like protein J9312_11995 PF07690 Major Facilitator Superfamily J9312_12010 PF00485 Phosphoribulokinase / Uridine kinase family J9312_12015 PF00291 Pyridoxal-phosphate dependent enzyme J9312_12020 PF00106 short chain dehydrogenase J9312_12025 PF00753 Metallo-beta-lactamase superfamily J9312_12030 PF03807 NADP oxidoreductase coenzyme F420-dependent J9312_12030 PF14748 Pyrroline-5-carboxylate reductase dimerisation J9312_12035 PF01546 Peptidase family M20/M25/M40 J9312_12040 PF00724 NADH:flavin oxidoreductase / NADH oxidase family J9312_12045 PF12146 Serine aminopeptidase, S33 J9312_12050 PF00471 Ribosomal protein L33 J9312_12055 PF12706 Beta-lactamase superfamily domain J9312_12060 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain J9312_12060 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain J9312_12065 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain J9312_12065 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase J9312_12070 PF00817 impB/mucB/samB family J9312_12070 PF11799 impB/mucB/samB family C-terminal domain J9312_12070 PF11798 IMS family HHH motif J9312_12080 PF02096 60Kd inner membrane protein J9312_12085 PF09844 Uncharacterized conserved protein (COG2071) J9312_12090 PF01546 Peptidase family M20/M25/M40 J9312_12090 PF07687 Peptidase dimerisation domain J9312_12095 PF01039 Carboxyl transferase domain J9312_12110 PF03734 L,D-transpeptidase catalytic domain J9312_12115 PF11728 Putative aromatic acid exporter C-terminal domain J9312_12115 PF06081 Aromatic acid exporter family member 1 J9312_12120 PF00005 ABC transporter J9312_12125 PF00528 Binding-protein-dependent transport system inner membrane component J9312_12130 PF00497 Bacterial extracellular solute-binding proteins, family 3 J9312_12140 PF06491 Disulphide isomerase J9312_12145 PF00781 Diacylglycerol kinase catalytic domain J9312_12150 PF07690 Major Facilitator Superfamily J9312_12155 PF13411 MerR HTH family regulatory protein J9312_12155 PF06445 GyrI-like small molecule binding domain J9312_12160 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) J9312_12160 PF00364 Biotin-requiring enzyme J9312_12160 PF02817 e3 binding domain J9312_12165 PF02779 Transketolase, pyrimidine binding domain J9312_12165 PF02780 Transketolase, C-terminal domain J9312_12170 PF00676 Dehydrogenase E1 component J9312_12175 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain J9312_12175 PF07992 Pyridine nucleotide-disulphide oxidoreductase J9312_12180 PF00871 Acetokinase family J9312_12185 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase J9312_12185 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain J9312_12190 PF01515 Phosphate acetyl/butaryl transferase J9312_12195 PF02954 Bacterial regulatory protein, Fis family J9312_12195 PF00158 Sigma-54 interaction domain J9312_12195 PF00989 PAS fold J9312_12200 PF11118 Protein of unknown function (DUF2627) J9312_12210 PF03972 MmgE/PrpD family J9312_12215 PF00285 Citrate synthase, C-terminal domain J9312_12220 PF00441 Acyl-CoA dehydrogenase, C-terminal domain J9312_12220 PF02770 Acyl-CoA dehydrogenase, middle domain J9312_12220 PF02771 Acyl-CoA dehydrogenase, N-terminal domain J9312_12225 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain J9312_12225 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain J9312_12230 PF00108 Thiolase, N-terminal domain J9312_12230 PF02803 Thiolase, C-terminal domain J9312_12235 PF03009 Glycerophosphoryl diester phosphodiesterase family J9312_12240 PF01520 N-acetylmuramoyl-L-alanine amidase J9312_12255 PF00724 NADH:flavin oxidoreductase / NADH oxidase family J9312_12260 PF00072 Response regulator receiver domain J9312_12260 PF08769 Sporulation initiation factor Spo0A C terminal J9312_12265 PF17820 PDZ domain J9312_12265 PF05580 SpoIVB peptidase S55 J9312_12270 PF13476 AAA domain J9312_12275 PF01316 Arginine repressor, DNA binding domain J9312_12275 PF02863 Arginine repressor, C-terminal domain J9312_12280 PF01728 FtsJ-like methyltransferase J9312_12280 PF01479 S4 domain J9312_12285 PF02779 Transketolase, pyrimidine binding domain J9312_12285 PF02780 Transketolase, C-terminal domain J9312_12285 PF13292 1-deoxy-D-xylulose-5-phosphate synthase J9312_12290 PF00348 Polyprenyl synthetase J9312_12295 PF02609 Exonuclease VII small subunit J9312_12300 PF02601 Exonuclease VII, large subunit J9312_12300 PF13742 OB-fold nucleic acid binding domain J9312_12305 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain J9312_12305 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain J9312_12310 PF01029 NusB family J9312_12315 PF03780 Asp23 family, cell envelope-related function J9312_12320 PF02785 Biotin carboxylase C-terminal domain J9312_12320 PF00289 Biotin carboxylase, N-terminal domain J9312_12320 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain J9312_12325 PF00364 Biotin-requiring enzyme J9312_12330 PF12685 SpoIIIAH-like protein J9312_12340 PF09581 Stage III sporulation protein AF (Spore_III_AF) J9312_12345 PF09546 Stage III sporulation protein AE (spore_III_AE) J9312_12350 PF06686 Stage III sporulation protein AC/AD protein family J9312_12355 PF06686 Stage III sporulation protein AC/AD protein family J9312_12360 PF09548 Stage III sporulation protein AB (spore_III_AB) J9312_12370 PF10942 Protein of unknown function (DUF2619) J9312_12375 PF09285 Elongation factor P, C-terminal J9312_12375 PF08207 Elongation factor P (EF-P) KOW-like domain J9312_12375 PF01132 Elongation factor P (EF-P) OB domain J9312_12380 PF00557 Metallopeptidase family M24 J9312_12380 PF01321 Creatinase/Prolidase N-terminal domain J9312_12385 PF01220 Dehydroquinase class II J9312_12390 PF11085 Conserved membrane protein YqhR J9312_12395 PF07136 Protein of unknown function (DUF1385) J9312_12405 PF01734 Patatin-like phospholipase J9312_12410 PF02742 Iron dependent repressor, metal binding and dimerisation domain J9312_12410 PF01325 Iron dependent repressor, N-terminal DNA binding domain J9312_12415 PF03099 Biotin/lipoate A/B protein ligase family J9312_12420 PF00581 Rhodanese-like domain J9312_12425 PF02347 Glycine cleavage system P-protein J9312_12430 PF02347 Glycine cleavage system P-protein J9312_12435 PF01571 Aminomethyltransferase folate-binding domain J9312_12435 PF08669 Glycine cleavage T-protein C-terminal barrel domain J9312_12440 PF00271 Helicase conserved C-terminal domain J9312_12440 PF00176 SNF2 family N-terminal domain J9312_12445 PF11079 Bacterial protein YqhG of unknown function J9312_12450 PF08671 Anti-repressor SinI J9312_12455 PF01381 Helix-turn-helix J9312_12455 PF08671 Anti-repressor SinI J9312_12460 PF12389 Camelysin metallo-endopeptidase J9312_12475 PF13028 Protein of unknown function (DUF3889) J9312_12480 PF14038 YqzE-like protein J9312_12485 PF14173 ComG operon protein 7 J9312_12490 PF15980 Putative Competence protein ComGF J9312_12500 PF07963 Prokaryotic N-terminal methylation motif J9312_12505 PF07963 Prokaryotic N-terminal methylation motif J9312_12510 PF00482 Type II secretion system (T2SS), protein F J9312_12515 PF00437 Type II/IV secretion system protein J9312_12520 PF00571 CBS domain J9312_12525 PF01544 CorA-like Mg2+ transporter protein J9312_12530 PF00571 CBS domain J9312_12530 PF03471 Transporter associated domain J9312_12530 PF01595 Cyclin M transmembrane N-terminal domain J9312_12535 PF14361 RsbT co-antagonist protein rsbRD N-terminal domain J9312_12535 PF01740 STAS domain J9312_12545 PF03960 ArsC family J9312_12550 PF11117 Protein of unknown function (DUF2626) J9312_12555 PF00753 Metallo-beta-lactamase superfamily J9312_12560 PF10958 Protein of unknown function (DUF2759) J9312_12565 PF01910 Thiamine-binding protein J9312_12575 PF00246 Zinc carboxypeptidase J9312_12580 PF00884 Sulfatase J9312_12585 PF00480 ROK family J9312_12590 PF06014 Bacterial protein of unknown function (DUF910) J9312_12595 PF01694 Rhomboid family J9312_12605 PF01812 5-formyltetrahydrofolate cyclo-ligase family J9312_12610 PF00471 Ribosomal protein L33 J9312_12615 PF00534 Glycosyl transferases group 1 J9312_12615 PF13439 Glycosyltransferase Family 4 J9312_12635 PF00005 ABC transporter J9312_12640 PF00005 ABC transporter J9312_12645 PF00528 Binding-protein-dependent transport system inner membrane component J9312_12650 PF00528 Binding-protein-dependent transport system inner membrane component J9312_12655 PF12849 PBP superfamily domain J9312_12660 PF00905 Penicillin binding protein transpeptidase domain J9312_12660 PF03717 Penicillin-binding Protein dimerisation domain J9312_12665 PF07690 Major Facilitator Superfamily J9312_12670 PF02777 Iron/manganese superoxide dismutases, C-terminal domain J9312_12670 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain J9312_12675 PF04306 Protein of unknown function (DUF456) J9312_12680 PF06691 Protein of unknown function (DUF1189) J9312_12690 PF04551 GcpE protein J9312_12705 PF01475 Ferric uptake regulator family J9312_12710 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) J9312_12710 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 J9312_12715 PF11116 Protein of unknown function (DUF2624) J9312_12720 PF01261 Xylose isomerase-like TIM barrel J9312_12725 PF00270 DEAD/DEAH box helicase J9312_12725 PF00271 Helicase conserved C-terminal domain J9312_12730 PF14181 YqfQ-like protein J9312_12735 PF02401 LytB protein J9312_12740 PF01784 NIF3 (NGG1p interacting factor 3) J9312_12745 PF04816 tRNA (adenine(22)-N(1))-methyltransferase J9312_12750 PF13442 Cytochrome C oxidase, cbb3-type, subunit III J9312_12755 PF03979 Sigma-70 factor, region 1.1 J9312_12755 PF04542 Sigma-70 region 2 J9312_12755 PF04539 Sigma-70 region 3 J9312_12755 PF04545 Sigma-70, region 4 J9312_12755 PF00140 Sigma-70 factor, region 1.2 J9312_12760 PF10410 DnaB-helicase binding domain of primase J9312_12760 PF01807 CHC2 zinc finger J9312_12760 PF08275 DNA primase catalytic core, N-terminal domain J9312_12765 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 J9312_12770 PF03618 Kinase/pyrophosphorylase J9312_12775 PF08279 HTH domain J9312_12775 PF00571 CBS domain J9312_12780 PF02092 Glycyl-tRNA synthetase beta subunit J9312_12785 PF02091 Glycyl-tRNA synthetase alpha subunit J9312_12790 PF11967 Recombination protein O N terminal J9312_12790 PF02565 Recombination protein O C terminal J9312_12795 PF14006 YqzL-like protein J9312_12800 PF01926 50S ribosome-binding GTPase J9312_12800 PF07650 KH domain J9312_12805 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region J9312_12810 PF01219 Prokaryotic diacylglycerol kinase J9312_12815 PF02130 Uncharacterized protein family UPF0054 J9312_12820 PF07698 7TM receptor with intracellular HD hydrolase J9312_12820 PF07697 7TM-HD extracellular J9312_12820 PF01966 HD domain J9312_12825 PF02562 PhoH-like protein J9312_12830 PF06898 Putative stage IV sporulation protein YqfD J9312_12835 PF07873 YabP family J9312_12845 PF12127 SigmaW regulon antibacterial J9312_12850 PF01957 NfeD-like C-terminal, partner-binding J9312_12850 PF01972 Serine dehydrogenase proteinase J9312_12855 PF09424 Yqey-like protein J9312_12860 PF01165 Ribosomal protein S21 J9312_12865 PF02690 Na+/Pi-cotransporter J9312_12870 PF01938 TRAM domain J9312_12870 PF04055 Radical SAM superfamily J9312_12870 PF00919 Uncharacterized protein family UPF0004 J9312_12875 PF04452 RNA methyltransferase J9312_12885 PF01556 DnaJ C terminal domain J9312_12885 PF00684 DnaJ central domain J9312_12885 PF00226 DnaJ domain J9312_12890 PF00012 Hsp70 protein J9312_12895 PF01025 GrpE J9312_12900 PF01628 HrcA protein C terminal domain J9312_12905 PF04055 Radical SAM superfamily J9312_12905 PF06969 HemN C-terminal domain J9312_12910 PF03144 Elongation factor Tu domain 2 J9312_12910 PF00679 Elongation factor G C-terminus J9312_12910 PF06421 GTP-binding protein LepA C-terminus J9312_12910 PF00009 Elongation factor Tu GTP binding domain J9312_12915 PF12438 Protein of unknown function (DUF3679) J9312_12920 PF07454 Stage II sporulation protein P (SpoIIP) J9312_12925 PF03418 Germination protease J9312_12930 PF01649 Ribosomal protein S20 J9312_12935 PF06144 DNA polymerase III, delta subunit J9312_12945 PF14141 YqzM-like protein J9312_12950 PF00753 Metallo-beta-lactamase superfamily J9312_12950 PF13567 Domain of unknown function (DUF4131) J9312_12950 PF03772 Competence protein J9312_12955 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region J9312_12960 PF10531 SLBB domain J9312_12965 PF14748 Pyrroline-5-carboxylate reductase dimerisation J9312_12965 PF03807 NADP oxidoreductase coenzyme F420-dependent J9312_12970 PF13649 Methyltransferase domain J9312_12980 PF01966 HD domain J9312_12985 PF01467 Cytidylyltransferase-like J9312_12990 PF01985 CRS1 / YhbY (CRM) domain J9312_12995 PF01488 Shikimate / quinate 5-dehydrogenase J9312_12995 PF08501 Shikimate dehydrogenase substrate binding domain J9312_12995 PF18317 Shikimate 5'-dehydrogenase C-terminal domain J9312_13000 PF01926 50S ribosome-binding GTPase J9312_13010 PF08970 Sporulation inhibitor A J9312_13015 PF00657 GDSL-like Lipase/Acylhydrolase J9312_13020 PF01510 N-acetylmuramoyl-L-alanine amidase J9312_13020 PF01471 Putative peptidoglycan binding domain J9312_13025 PF09335 SNARE associated Golgi protein J9312_13030 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain J9312_13030 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase J9312_13040 PF14040 Deoxyribonuclease NucA/NucB J9312_13045 PF04545 Sigma-70, region 4 J9312_13045 PF04542 Sigma-70 region 2 J9312_13060 PF00206 Lyase J9312_13060 PF10415 Fumarase C C-terminus J9312_13065 PF03466 LysR substrate binding domain J9312_13065 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J9312_13075 PF13176 Tetratricopeptide repeat J9312_13075 PF18801 response regulator aspartate phosphatase H, N terminal J9312_13125 PF18593 CdiI immunity protein J9312_13130 PF00665 Integrase core domain J9312_13135 PF01695 IstB-like ATP binding protein J9312_13175 PF17356 Phage-like element PBSX protein XtrA J9312_13200 PF06445 GyrI-like small molecule binding domain J9312_13200 PF13411 MerR HTH family regulatory protein J9312_13205 PF07690 Major Facilitator Superfamily J9312_13210 PF00583 Acetyltransferase (GNAT) family J9312_13215 PF00872 Transposase, Mutator family J9312_13220 PF03471 Transporter associated domain J9312_13220 PF01595 Cyclin M transmembrane N-terminal domain J9312_13220 PF00571 CBS domain J9312_13225 PF14142 YrzO-like protein J9312_13230 PF00892 EamA-like transporter family J9312_13235 PF03466 LysR substrate binding domain J9312_13235 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J9312_13245 PF16916 Dimerisation domain of Zinc Transporter J9312_13245 PF01545 Cation efflux family J9312_13255 PF05525 Branched-chain amino acid transport protein J9312_13260 PF05437 Branched-chain amino acid transport protein (AzlD) J9312_13270 PF01037 Lrp/AsnC ligand binding domain J9312_13275 PF01337 Barstar (barnase inhibitor) J9312_13280 PF00067 Cytochrome P450 J9312_13295 PF00857 Isochorismatase family J9312_13300 PF10823 Protein of unknown function (DUF2568) J9312_13315 PF05163 DinB family J9312_13320 PF04439 Streptomycin adenylyltransferase J9312_13325 PF03060 Nitronate monooxygenase J9312_13330 PF01177 Asp/Glu/Hydantoin racemase J9312_13335 PF15493 Domain of unknown function, YrpD J9312_13340 PF09680 Family of unknown function J9312_13350 PF09223 ZinT (YodA) periplasmic lipocalin-like zinc-recruitment J9312_13360 PF00248 Aldo/keto reductase family J9312_13365 PF01374 Glycosyl hydrolase family 46 J9312_13375 PF00561 alpha/beta hydrolase fold J9312_13395 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily J9312_13405 PF07875 Coat F domain J9312_13410 PF08240 Alcohol dehydrogenase GroES-like domain J9312_13410 PF13823 Alcohol dehydrogenase GroES-associated J9312_13410 PF00107 Zinc-binding dehydrogenase J9312_13420 PF07875 Coat F domain J9312_13425 PF13411 MerR HTH family regulatory protein J9312_13435 PF08240 Alcohol dehydrogenase GroES-like domain J9312_13435 PF00107 Zinc-binding dehydrogenase J9312_13440 PF01965 DJ-1/PfpI family J9312_13445 PF08244 Glycosyl hydrolases family 32 C terminal J9312_13445 PF00251 Glycosyl hydrolases family 32 N-terminal domain J9312_13450 PF03613 PTS system mannose/fructose/sorbose family IID component J9312_13455 PF03609 PTS system sorbose-specific iic component J9312_13460 PF03830 PTS system sorbose subfamily IIB component J9312_13465 PF03610 PTS system fructose IIA component J9312_13470 PF00158 Sigma-54 interaction domain J9312_13470 PF00874 PRD domain J9312_13470 PF03610 PTS system fructose IIA component J9312_13480 PF00324 Amino acid permease J9312_13485 PF01810 LysE type translocator J9312_13490 PF11495 Archaeal transcriptional regulator TrmB J9312_13490 PF01978 Sugar-specific transcriptional regulator TrmB J9312_13495 PF04542 Sigma-70 region 2 J9312_13495 PF08281 Sigma-70, region 4 J9312_13500 PF11738 Protein of unknown function (DUF3298) J9312_13500 PF13739 Deacetylase PdaC J9312_13505 PF01757 Acyltransferase family J9312_13510 PF14145 YrhK-like protein J9312_13515 PF00667 FAD binding domain J9312_13515 PF00067 Cytochrome P450 J9312_13515 PF00175 Oxidoreductase NAD-binding domain J9312_13515 PF00258 Flavodoxin J9312_13520 PF16295 Tetracyclin repressor-like, C-terminal domain J9312_13520 PF00440 Bacterial regulatory proteins, tetR family J9312_13525 PF08241 Methyltransferase domain J9312_13535 PF09501 Probable sporulation protein (Bac_small_yrzI) J9312_13540 PF01226 Formate/nitrite transporter J9312_13545 PF10057 Uncharacterized conserved protein (DUF2294) J9312_13550 PF00037 4Fe-4S binding domain J9312_13550 PF04879 Molybdopterin oxidoreductase Fe4S4 domain J9312_13550 PF00384 Molybdopterin oxidoreductase J9312_13550 PF01568 Molydopterin dinucleotide binding domain J9312_13550 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region J9312_13555 PF07849 Protein of unknown function (DUF1641) J9312_13560 PF14143 YrhC-like protein J9312_13565 PF01053 Cys/Met metabolism PLP-dependent enzyme J9312_13570 PF00291 Pyridoxal-phosphate dependent enzyme J9312_13575 PF01048 Phosphorylase superfamily J9312_13580 PF13649 Methyltransferase domain J9312_13585 PF10750 Protein of unknown function (DUF2536) J9312_13590 PF07423 Domain of unknown function (DUF1510) J9312_13595 PF03717 Penicillin-binding Protein dimerisation domain J9312_13595 PF00905 Penicillin binding protein transpeptidase domain J9312_13600 PF01272 Transcription elongation factor, GreA/GreB, C-term J9312_13600 PF03449 Transcription elongation factor, N-terminal J9312_13605 PF00485 Phosphoribulokinase / Uridine kinase family J9312_13610 PF01136 Peptidase family U32 J9312_13610 PF16325 Peptidase family U32 C-terminal domain J9312_13615 PF01136 Peptidase family U32 J9312_13620 PF01596 O-methyltransferase J9312_13625 PF02618 YceG-like family J9312_13630 PF06949 Protein of unknown function (DUF1292) J9312_13635 PF03652 Holliday junction resolvase J9312_13640 PF06135 IreB regulatory phosphoprotein J9312_13645 PF02272 DHHA1 domain J9312_13645 PF01411 tRNA synthetases class II (A) J9312_13645 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain J9312_13650 PF01594 AI-2E family transporter J9312_13655 PF00005 ABC transporter J9312_13660 PF00497 Bacterial extracellular solute-binding proteins, family 3 J9312_13665 PF00528 Binding-protein-dependent transport system inner membrane component J9312_13670 PF00528 Binding-protein-dependent transport system inner membrane component J9312_13675 PF13056 Protein of unknown function (DUF3918) J9312_13685 PF05239 PRC-barrel domain J9312_13690 PF14490 Helix-hairpin-helix containing domain J9312_13690 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain J9312_13690 PF13538 UvrD-like helicase C-terminal domain J9312_13695 PF07719 Tetratricopeptide repeat J9312_13695 PF13181 Tetratricopeptide repeat J9312_13705 PF00266 Aminotransferase class-V J9312_13710 PF02082 Transcriptional regulator J9312_13715 PF16193 AAA C-terminal domain J9312_13715 PF12002 MgsA AAA+ ATPase C terminal J9312_13715 PF05496 Holliday junction DNA helicase RuvB P-loop domain J9312_13720 PF00899 ThiF family J9312_13730 PF02938 GAD domain J9312_13730 PF01336 OB-fold nucleic acid binding domain J9312_13730 PF00152 tRNA synthetases class II (D, K and N) J9312_13735 PF03129 Anticodon binding domain J9312_13735 PF13393 Histidyl-tRNA synthetase J9312_13740 PF17449 Uncharacterized YrzK-like J9312_13745 PF01520 N-acetylmuramoyl-L-alanine amidase J9312_13745 PF08239 Bacterial SH3 domain J9312_13750 PF02580 D-Tyr-tRNA(Tyr) deacylase J9312_13755 PF04607 Region found in RelA / SpoT proteins J9312_13755 PF02824 TGS domain J9312_13755 PF13291 ACT domain J9312_13760 PF00156 Phosphoribosyl transferase domain J9312_13765 PF10141 Single-strand DNA-specific exonuclease, C terminal domain J9312_13765 PF02272 DHHA1 domain J9312_13765 PF17768 RecJ OB domain J9312_13765 PF01368 DHH family J9312_13770 PF06305 Lipopolysaccharide assembly protein A domain J9312_13775 PF02080 TrkA-C domain J9312_13780 PF07549 SecD/SecF GG Motif J9312_13780 PF02355 Protein export membrane protein J9312_13785 PF13797 Post-transcriptional regulator J9312_13790 PF01943 Polysaccharide biosynthesis protein J9312_13790 PF14667 Polysaccharide biosynthesis C-terminal domain J9312_13795 PF04239 Protein of unknown function (DUF421) J9312_13800 PF12670 Protein of unknown function (DUF3792) J9312_13805 PF02699 Preprotein translocase subunit J9312_13810 PF01702 Queuine tRNA-ribosyltransferase J9312_13815 PF02547 Queuosine biosynthesis protein J9312_13820 PF11146 Protein of unknown function (DUF2905) J9312_13825 PF17864 RuvB AAA lid domain J9312_13825 PF05491 RuvB C-terminal winged helix domain J9312_13825 PF05496 Holliday junction DNA helicase RuvB P-loop domain J9312_13830 PF07499 RuvA, C-terminal domain J9312_13830 PF01330 RuvA N terminal domain J9312_13835 PF08977 Bypass of Forespore C, N terminal J9312_13835 PF08955 BofC C-terminal domain J9312_13840 PF07690 Major Facilitator Superfamily J9312_13845 PF02894 Oxidoreductase family, C-terminal alpha/beta domain J9312_13845 PF01408 Oxidoreductase family, NAD-binding Rossmann fold J9312_13870 PF01235 Sodium:alanine symporter family J9312_13875 PF01709 Transcriptional regulator J9312_13880 PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) J9312_13885 PF01476 LysM domain J9312_13890 PF02445 Quinolinate synthetase A protein J9312_13895 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain J9312_13895 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain J9312_13900 PF00890 FAD binding domain J9312_13900 PF02910 Fumarate reductase flavoprotein C-term J9312_13905 PF00266 Aminotransferase class-V J9312_13910 PF08279 HTH domain J9312_13910 PF02829 3H domain J9312_13915 PF01842 ACT domain J9312_13915 PF00800 Prephenate dehydratase J9312_13920 PF01842 ACT domain J9312_13925 PF09269 Domain of unknown function (DUF1967) J9312_13925 PF01018 GTP1/OBG J9312_13925 PF01926 50S ribosome-binding GTPase J9312_13930 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain J9312_13930 PF14682 Sporulation initiation phospho-transferase B, C-terminal J9312_13940 PF01016 Ribosomal L27 protein J9312_13945 PF04327 Cysteine protease Prp J9312_13950 PF00829 Ribosomal prokaryotic L21 protein J9312_13955 PF02163 Peptidase family M50 J9312_13960 PF01551 Peptidase family M23 J9312_13965 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain J9312_13970 PF03775 Septum formation inhibitor MinC, C-terminal domain J9312_13975 PF04093 rod shape-determining protein MreD J9312_13980 PF04085 rod shape-determining protein MreC J9312_13990 PF00633 Helix-hairpin-helix motif J9312_13990 PF04002 RadC-like JAB domain J9312_13995 PF02545 Maf-like protein J9312_14000 PF05036 Sporulation related domain J9312_14005 PF06750 Bacterial Peptidase A24 N-terminal domain J9312_14005 PF01478 Type IV leader peptidase family J9312_14010 PF02875 Mur ligase family, glutamate ligase domain J9312_14010 PF08245 Mur ligase middle domain J9312_14015 PF08264 Anticodon-binding domain of tRNA J9312_14015 PF10458 Valyl tRNA synthetase tRNA binding arm J9312_14015 PF00133 tRNA synthetases class I (I, L, M and V) J9312_14030 PF01476 LysM domain J9312_14035 PF00202 Aminotransferase class-III J9312_14040 PF00490 Delta-aminolevulinic acid dehydratase J9312_14045 PF02602 Uroporphyrinogen-III synthase HemD J9312_14050 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain J9312_14050 PF03900 Porphobilinogen deaminase, C-terminal domain J9312_14055 PF01578 Cytochrome C assembly protein J9312_14060 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain J9312_14060 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain J9312_14060 PF01488 Shikimate / quinate 5-dehydrogenase J9312_14070 PF01926 50S ribosome-binding GTPase J9312_14075 PF00004 ATPase family associated with various cellular activities (AAA) J9312_14075 PF02190 ATP-dependent protease La (LON) substrate-binding domain J9312_14075 PF05362 Lon protease (S16) C-terminal proteolytic domain J9312_14080 PF00004 ATPase family associated with various cellular activities (AAA) J9312_14080 PF05362 Lon protease (S16) C-terminal proteolytic domain J9312_14085 PF07724 AAA domain (Cdc48 subfamily) J9312_14085 PF10431 C-terminal, D2-small domain, of ClpB protein J9312_14085 PF06689 ClpX C4-type zinc finger J9312_14090 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase J9312_14090 PF05698 Bacterial trigger factor protein (TF) C-terminus J9312_14090 PF05697 Bacterial trigger factor protein (TF) J9312_14100 PF00694 Aconitase C-terminal domain J9312_14105 PF00330 Aconitase family (aconitate hydratase) J9312_14110 PF00180 Isocitrate/isopropylmalate dehydrogenase J9312_14115 PF00682 HMGL-like J9312_14115 PF08502 LeuA allosteric (dimerisation) domain J9312_14120 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain J9312_14120 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain J9312_14125 PF01842 ACT domain J9312_14125 PF10369 Small subunit of acetolactate synthase J9312_14130 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain J9312_14130 PF00205 Thiamine pyrophosphate enzyme, central domain J9312_14130 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain J9312_14140 PF00583 Acetyltransferase (GNAT) family J9312_14145 PF11181 Heat induced stress protein YflT J9312_14145 PF09557 Domain of unknown function (DUF2382) J9312_14160 PF12850 Calcineurin-like phosphoesterase superfamily domain J9312_14165 PF01725 Ham1 family J9312_14170 PF01138 3' exoribonuclease family, domain 1 J9312_14170 PF03725 3' exoribonuclease family, domain 2 J9312_14175 PF10646 Sporulation and spore germination J9312_14180 PF01177 Asp/Glu/Hydantoin racemase J9312_14185 PF01047 MarR family J9312_14190 PF00196 Bacterial regulatory proteins, luxR family J9312_14195 PF03061 Thioesterase superfamily J9312_14200 PF13085 2Fe-2S iron-sulfur cluster binding domain J9312_14200 PF13183 4Fe-4S dicluster domain J9312_14205 PF02910 Fumarate reductase flavoprotein C-term J9312_14205 PF00890 FAD binding domain J9312_14210 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit J9312_14215 PF10702 Protein of unknown function (DUF2507) J9312_14220 PF00696 Amino acid kinase family J9312_14220 PF01842 ACT domain J9312_14220 PF13840 ACT domain J9312_14225 PF08459 UvrC Helix-hairpin-helix N-terminal J9312_14225 PF02151 UvrB/uvrC motif J9312_14225 PF01541 GIY-YIG catalytic domain J9312_14230 PF00085 Thioredoxin J9312_14235 PF06964 Alpha-L-arabinofuranosidase C-terminal domain J9312_14240 PF00766 Electron transfer flavoprotein FAD-binding domain J9312_14240 PF01012 Electron transfer flavoprotein domain J9312_14245 PF01012 Electron transfer flavoprotein domain J9312_14250 PF00378 Enoyl-CoA hydratase/isomerase J9312_14255 PF08359 YsiA-like protein, C-terminal region J9312_14255 PF00440 Bacterial regulatory proteins, tetR family J9312_14260 PF00501 AMP-binding enzyme J9312_14260 PF13193 AMP-binding enzyme C-terminal domain J9312_14265 PF03994 Domain of Unknown Function (DUF350) J9312_14270 PF01713 Smr domain J9312_14270 PF00488 MutS domain V J9312_14275 PF14716 Helix-hairpin-helix domain J9312_14275 PF14791 DNA polymerase beta thumb J9312_14275 PF02811 PHP domain J9312_14280 PF02674 Colicin V production protein J9312_14285 PF05164 Cell division protein ZapA J9312_14290 PF11858 Domain of unknown function (DUF3378) J9312_14290 PF01351 Ribonuclease HII J9312_14295 PF03483 B3/4 domain J9312_14295 PF03484 tRNA synthetase B5 domain J9312_14295 PF03147 Ferredoxin-fold anticodon binding domain J9312_14295 PF01588 Putative tRNA binding domain J9312_14295 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain J9312_14300 PF01409 tRNA synthetases class II core domain (F) J9312_14300 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain J9312_14310 PF00588 SpoU rRNA Methylase family J9312_14310 PF08032 RNA 2'-O ribose methyltransferase substrate binding J9312_14315 PF14098 Small, acid-soluble spore protein I J9312_14320 PF05651 Putative sugar diacid recognition J9312_14320 PF13556 PucR C-terminal helix-turn-helix domain J9312_14320 PF17853 GGDEF-like domain J9312_14325 PF01565 FAD binding domain J9312_14325 PF02913 FAD linked oxidases, C-terminal domain J9312_14330 PF13183 4Fe-4S dicluster domain J9312_14330 PF02754 Cysteine-rich domain J9312_14335 PF12681 Glyoxalase-like domain J9312_14345 PF13722 5TM C-terminal transporter carbon starvation CstA J9312_14345 PF02554 Carbon starvation protein CstA J9312_14350 PF06964 Alpha-L-arabinofuranosidase C-terminal domain J9312_14355 PF00528 Binding-protein-dependent transport system inner membrane component J9312_14360 PF00528 Binding-protein-dependent transport system inner membrane component J9312_14365 PF01547 Bacterial extracellular solute-binding protein J9312_14370 PF13685 Iron-containing alcohol dehydrogenase J9312_14375 PF13344 Haloacid dehalogenase-like hydrolase J9312_14380 PF00596 Class II Aldolase and Adducin N-terminal domain J9312_14385 PF02782 FGGY family of carbohydrate kinases, C-terminal domain J9312_14385 PF00370 FGGY family of carbohydrate kinases, N-terminal domain J9312_14390 PF11762 L-arabinose isomerase C-terminal domain J9312_14390 PF02610 L-arabinose isomerase J9312_14395 PF04616 Glycosyl hydrolases family 43 J9312_14400 PF05343 M42 glutamyl aminopeptidase J9312_14410 PF06961 Protein of unknown function (DUF1294) J9312_14415 PF00453 Ribosomal protein L20 J9312_14420 PF01632 Ribosomal protein L35 J9312_14425 PF05198 Translation initiation factor IF-3, N-terminal domain J9312_14425 PF00707 Translation initiation factor IF-3, C-terminal domain J9312_14435 PF04172 LrgB-like family J9312_14440 PF03788 LrgA family J9312_14445 PF04397 LytTr DNA-binding domain J9312_14445 PF00072 Response regulator receiver domain J9312_14450 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J9312_14450 PF06580 Histidine kinase J9312_14450 PF07694 5TMR of 5TMR-LYT J9312_14455 PF13419 Haloacid dehalogenase-like hydrolase J9312_14460 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) J9312_14460 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain J9312_14460 PF02824 TGS domain J9312_14460 PF03129 Anticodon binding domain J9312_14465 PF08812 YtxC-like family J9312_14470 PF09335 SNARE associated Golgi protein J9312_14475 PF07319 Primosomal protein DnaI N-terminus J9312_14475 PF01695 IstB-like ATP binding protein J9312_14480 PF07261 Replication initiation and membrane attachment J9312_14485 PF03477 ATP cone domain J9312_14490 PF02675 S-adenosylmethionine decarboxylase J9312_14495 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain J9312_14495 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain J9312_14510 PF00248 Aldo/keto reductase family J9312_14515 PF01121 Dephospho-CoA kinase J9312_14520 PF02659 Putative manganese efflux pump J9312_14525 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain J9312_14525 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain J9312_14525 PF06827 Zinc finger found in FPG and IleRS J9312_14530 PF01367 5'-3' exonuclease, C-terminal SAM fold J9312_14530 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain J9312_14530 PF00476 DNA polymerase family A J9312_14535 PF00512 His Kinase A (phospho-acceptor) domain J9312_14535 PF16736 Single Cache-like J9312_14535 PF00989 PAS fold J9312_14535 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J9312_14540 PF00072 Response regulator receiver domain J9312_14540 PF00486 Transcriptional regulatory protein, C terminal J9312_14545 PF00056 lactate/malate dehydrogenase, NAD binding domain J9312_14545 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain J9312_14550 PF00180 Isocitrate/isopropylmalate dehydrogenase J9312_14555 PF00285 Citrate synthase, C-terminal domain J9312_14560 PF04284 Protein of unknown function (DUF441) J9312_14565 PF01594 AI-2E family transporter J9312_14570 PF04186 FxsA cytoplasmic membrane protein J9312_14575 PF00391 PEP-utilising enzyme, mobile domain J9312_14575 PF00224 Pyruvate kinase, barrel domain J9312_14575 PF02887 Pyruvate kinase, alpha/beta domain J9312_14580 PF00365 Phosphofructokinase J9312_14585 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit J9312_14590 PF01039 Carboxyl transferase domain J9312_14590 PF17848 Acetyl-coA carboxylase zinc finger domain J9312_14595 PF00390 Malic enzyme, N-terminal domain J9312_14595 PF03949 Malic enzyme, NAD binding domain J9312_14600 PF07733 Bacterial DNA polymerase III alpha NTPase domain J9312_14600 PF14579 Helix-hairpin-helix motif J9312_14600 PF02811 PHP domain J9312_14600 PF01336 OB-fold nucleic acid binding domain J9312_14600 PF17657 Bacterial DNA polymerase III alpha subunit finger domain J9312_14605 PF14034 Sporulation protein YtrH J9312_14620 PF01368 DHH family J9312_14620 PF02272 DHHA1 domain J9312_14625 PF14007 YtpI-like protein J9312_14630 PF03061 Thioesterase superfamily J9312_14630 PF00571 CBS domain J9312_14630 PF00392 Bacterial regulatory proteins, gntR family J9312_14630 PF07085 DRTGG domain J9312_14645 PF14698 Argininosuccinate lyase C-terminal J9312_14645 PF00206 Lyase J9312_14650 PF00764 Arginosuccinate synthase J9312_14655 PF00994 Probable molybdopterin binding domain J9312_14660 PF00871 Acetokinase family J9312_14670 PF02384 N-6 DNA Methylase J9312_14675 PF08534 Redoxin J9312_14680 PF09579 Sporulation protein YtfJ (Spore_YtfJ) J9312_14685 PF11167 Protein of unknown function (DUF2953) J9312_14690 PF06271 RDD family J9312_14695 PF01343 Peptidase family S49 J9312_14700 PF01513 ATP-NAD kinase J9312_14705 PF07969 Amidohydrolase family J9312_14710 PF13193 AMP-binding enzyme C-terminal domain J9312_14710 PF00501 AMP-binding enzyme J9312_14715 PF00269 Small, acid-soluble spore proteins, alpha/beta type J9312_14720 PF02568 Thiamine biosynthesis protein (ThiI) J9312_14720 PF02926 THUMP domain J9312_14725 PF00266 Aminotransferase class-V J9312_14730 PF05525 Branched-chain amino acid transport protein J9312_14735 PF06160 Septation ring formation regulator, EzrA J9312_14740 PF02811 PHP domain J9312_14745 PF00440 Bacterial regulatory proteins, tetR family J9312_14750 PF13185 GAF domain J9312_14755 PF00990 Diguanylate cyclase, GGDEF domain J9312_14760 PF00163 Ribosomal protein S4/S9 N-terminal domain J9312_14760 PF01479 S4 domain J9312_14765 PF00579 tRNA synthetases class I (W and Y) J9312_14765 PF01479 S4 domain J9312_14770 PF00501 AMP-binding enzyme J9312_14770 PF13193 AMP-binding enzyme C-terminal domain J9312_14775 PF00583 Acetyltransferase (GNAT) family J9312_14780 PF00571 CBS domain J9312_14785 PF00850 Histone deacetylase domain J9312_14790 PF13677 Membrane MotB of proton-channel complex MotA/MotB J9312_14790 PF00691 OmpA family J9312_14795 PF01618 MotA/TolQ/ExbB proton channel family J9312_14800 PF00356 Bacterial regulatory proteins, lacI family J9312_14805 PF01817 Chorismate mutase type II J9312_14805 PF00793 DAHP synthetase I family J9312_14810 PF11009 Protein of unknown function (DUF2847) J9312_14815 PF12732 YtxH-like protein J9312_14820 PF06103 Bacterial protein of unknown function (DUF948) J9312_14825 PF01225 Mur ligase family, catalytic domain J9312_14825 PF02875 Mur ligase family, glutamate ligase domain J9312_14825 PF08245 Mur ligase middle domain J9312_14830 PF09397 Ftsk gamma domain J9312_14830 PF01580 FtsK/SpoIIIE family J9312_14830 PF17854 FtsK alpha domain J9312_14835 PF01588 Putative tRNA binding domain J9312_14835 PF14794 Domain of unknown function (DUF4479) J9312_14840 PF07285 Protein of unknown function (DUF1444) J9312_14845 PF00085 Thioredoxin J9312_14860 PF05343 M42 glutamyl aminopeptidase J9312_14865 PF03413 Peptidase propeptide and YPEB domain J9312_14870 PF03949 Malic enzyme, NAD binding domain J9312_14870 PF00390 Malic enzyme, N-terminal domain J9312_14875 PF00753 Metallo-beta-lactamase superfamily J9312_14880 PF02390 Putative methyltransferase J9312_14885 PF14165 YtzH-like protein J9312_14890 PF01636 Phosphotransferase enzyme family J9312_14895 PF00128 Alpha amylase, catalytic domain J9312_14895 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) J9312_14895 PF17999 Pullulanase N1-terminal domain J9312_14900 PF00781 Diacylglycerol kinase catalytic domain J9312_14915 PF00291 Pyridoxal-phosphate dependent enzyme J9312_14920 PF01546 Peptidase family M20/M25/M40 J9312_14925 PF00860 Permease family J9312_14930 PF05975 Bacterial ABC transporter protein EcsB J9312_14935 PF00005 ABC transporter J9312_14940 PF08220 DeoR-like helix-turn-helix domain J9312_14945 PF00849 RNA pseudouridylate synthase J9312_14945 PF01479 S4 domain J9312_14950 PF14667 Polysaccharide biosynthesis C-terminal domain J9312_14950 PF01943 Polysaccharide biosynthesis protein J9312_14960 PF02028 BCCT, betaine/carnitine/choline family transporter J9312_14965 PF10957 Sporulation protein Cse60 J9312_14970 PF04854 Protein of unknown function, DUF624 J9312_14975 PF01408 Oxidoreductase family, NAD-binding Rossmann fold J9312_14975 PF02894 Oxidoreductase family, C-terminal alpha/beta domain J9312_14985 PF07470 Glycosyl Hydrolase Family 88 J9312_14990 PF00528 Binding-protein-dependent transport system inner membrane component J9312_14995 PF17853 GGDEF-like domain J9312_14995 PF12833 Helix-turn-helix domain J9312_15000 PF13416 Bacterial extracellular solute-binding protein J9312_15005 PF00528 Binding-protein-dependent transport system inner membrane component J9312_15010 PF01370 NAD dependent epimerase/dehydratase family J9312_15015 PF00067 Cytochrome P450 J9312_15020 PF04055 Radical SAM superfamily J9312_15020 PF06968 Biotin and Thiamin Synthesis associated domain J9312_15030 PF00155 Aminotransferase class I and II J9312_15035 PF00202 Aminotransferase class-III J9312_15040 PF03744 6-carboxyhexanoate--CoA ligase J9312_15045 PF01738 Dienelactone hydrolase family J9312_15050 PF00356 Bacterial regulatory proteins, lacI family J9312_15055 PF01547 Bacterial extracellular solute-binding protein J9312_15060 PF00528 Binding-protein-dependent transport system inner membrane component J9312_15065 PF00528 Binding-protein-dependent transport system inner membrane component J9312_15070 PF02056 Family 4 glycosyl hydrolase J9312_15070 PF11975 Family 4 glycosyl hydrolase C-terminal domain J9312_15075 PF00581 Rhodanese-like domain J9312_15080 PF00133 tRNA synthetases class I (I, L, M and V) J9312_15080 PF13603 Leucyl-tRNA synthetase, Domain 2 J9312_15080 PF09334 tRNA synthetases class I (M) J9312_15080 PF08264 Anticodon-binding domain of tRNA J9312_15085 PF14074 Protein of unknown function (DUF4257) J9312_15090 PF13426 PAS domain J9312_15090 PF01740 STAS domain J9312_15095 PF07690 Major Facilitator Superfamily J9312_15105 PF02687 FtsX-like permease family J9312_15110 PF00005 ABC transporter J9312_15115 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J9312_15120 PF00072 Response regulator receiver domain J9312_15120 PF00486 Transcriptional regulatory protein, C terminal J9312_15125 PF02687 FtsX-like permease family J9312_15125 PF12704 MacB-like periplasmic core domain J9312_15130 PF00005 ABC transporter J9312_15145 PF00005 ABC transporter J9312_15150 PF00392 Bacterial regulatory proteins, gntR family J9312_15160 PF10732 Protein of unknown function (DUF2524) J9312_15165 PF04055 Radical SAM superfamily J9312_15165 PF16199 Radical_SAM C-terminal domain J9312_15170 PF06962 Putative rRNA methylase J9312_15175 PF10776 Protein of unknown function (DUF2600) J9312_15180 PF12146 Serine aminopeptidase, S33 J9312_15185 PF00132 Bacterial transferase hexapeptide (six repeats) J9312_15190 PF00324 Amino acid permease J9312_15195 PF00733 Asparagine synthase J9312_15195 PF13537 Glutamine amidotransferase domain J9312_15200 PF02773 S-adenosylmethionine synthetase, C-terminal domain J9312_15200 PF02772 S-adenosylmethionine synthetase, central domain J9312_15200 PF00438 S-adenosylmethionine synthetase, N-terminal domain J9312_15205 PF01293 Phosphoenolpyruvate carboxykinase J9312_15210 PF10763 Protein of unknown function (DUF2584) J9312_15215 PF00326 Prolyl oligopeptidase family J9312_15225 PF00005 ABC transporter J9312_15230 PF00528 Binding-protein-dependent transport system inner membrane component J9312_15235 PF00293 NUDIX domain J9312_15240 PF05105 Bacteriophage holin family J9312_15245 PF00210 Ferritin-like domain J9312_15255 PF13115 YtkA-like J9312_15260 PF02664 S-Ribosylhomocysteinase (LuxS) J9312_15265 PF01809 Putative membrane protein insertion efficiency factor J9312_15270 PF00484 Carbonic anhydrase J9312_15275 PF01197 Ribosomal protein L31 J9312_15280 PF01654 Cytochrome bd terminal oxidase subunit I J9312_15285 PF02322 Cytochrome bd terminal oxidase subunit II J9312_15290 PF07561 Domain of Unknown Function (DUF1540) J9312_15295 PF00950 ABC 3 transport family J9312_15300 PF00950 ABC 3 transport family J9312_15305 PF00005 ABC transporter J9312_15310 PF01297 Zinc-uptake complex component A periplasmic J9312_15315 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain J9312_15315 PF13378 Enolase C-terminal domain-like J9312_15320 PF13193 AMP-binding enzyme C-terminal domain J9312_15320 PF00501 AMP-binding enzyme J9312_15325 PF00378 Enoyl-CoA hydratase/isomerase J9312_15330 PF00561 alpha/beta hydrolase fold J9312_15335 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain J9312_15335 PF16582 Middle domain of thiamine pyrophosphate J9312_15335 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain J9312_15340 PF00425 chorismate binding enzyme J9312_15345 PF01258 Prokaryotic dksA/traR C4-type zinc finger J9312_15350 PF00483 Nucleotidyl transferase J9312_15355 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain J9312_15355 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain J9312_15355 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain J9312_15360 PF01370 NAD dependent epimerase/dehydratase family J9312_15365 PF00534 Glycosyl transferases group 1 J9312_15365 PF13439 Glycosyltransferase Family 4 J9312_15380 PF13439 Glycosyltransferase Family 4 J9312_15380 PF00534 Glycosyl transferases group 1 J9312_15385 PF01636 Phosphotransferase enzyme family J9312_15390 PF03073 TspO/MBR family J9312_15395 PF00343 Carbohydrate phosphorylase J9312_15400 PF00534 Glycosyl transferases group 1 J9312_15400 PF08323 Starch synthase catalytic domain J9312_15405 PF00483 Nucleotidyl transferase J9312_15410 PF00483 Nucleotidyl transferase J9312_15415 PF02806 Alpha amylase, C-terminal all-beta domain J9312_15415 PF00128 Alpha amylase, catalytic domain J9312_15415 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) J9312_15540 PF09515 Thiamine transporter protein (Thia_YuaJ) J9312_15545 PF00583 Acetyltransferase (GNAT) family J9312_15550 PF15975 Flotillin J9312_15550 PF01145 SPFH domain / Band 7 family J9312_15560 PF12867 DinB superfamily J9312_15570 PF00465 Iron-containing alcohol dehydrogenase J9312_15575 PF00171 Aldehyde dehydrogenase family J9312_15585 PF17735 Biofilm surface layer A J9312_15595 PF02080 TrkA-C domain J9312_15595 PF02254 TrkA-N domain J9312_15600 PF02386 Cation transport protein J9312_15605 PF05360 yiaA/B two helix domain J9312_15610 PF13457 GW (Gly-Tryp) dipeptide domain J9312_15610 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase J9312_15615 PF07690 Major Facilitator Superfamily J9312_15620 PF05995 Cysteine dioxygenase type I J9312_15630 PF02673 Bacitracin resistance protein BacA J9312_15635 PF01594 AI-2E family transporter J9312_15640 PF01408 Oxidoreductase family, NAD-binding Rossmann fold J9312_15640 PF02894 Oxidoreductase family, C-terminal alpha/beta domain J9312_15650 PF05336 L-rhamnose mutarotase J9312_15655 PF00370 FGGY family of carbohydrate kinases, N-terminal domain J9312_15655 PF02782 FGGY family of carbohydrate kinases, C-terminal domain J9312_15660 PF00455 DeoR C terminal sensor domain J9312_15660 PF08220 DeoR-like helix-turn-helix domain J9312_15665 PF00596 Class II Aldolase and Adducin N-terminal domain J9312_15675 PF02743 Cache domain J9312_15675 PF00672 HAMP domain J9312_15675 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J9312_15680 PF02743 Cache domain J9312_15680 PF00672 HAMP domain J9312_15680 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J9312_15685 PF02743 Cache domain J9312_15685 PF00672 HAMP domain J9312_15685 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J9312_15700 PF01894 Uncharacterised protein family UPF0047 J9312_15710 PF16657 Maltogenic Amylase, C-terminal domain J9312_15710 PF00128 Alpha amylase, catalytic domain J9312_15715 PF01595 Cyclin M transmembrane N-terminal domain J9312_15715 PF03471 Transporter associated domain J9312_15715 PF00571 CBS domain J9312_15720 PF04298 Putative neutral zinc metallopeptidase J9312_15730 PF11458 Membrane-integrating protein Mistic J9312_15735 PF02254 TrkA-N domain J9312_15735 PF07885 Ion channel J9312_15740 PF08868 YugN-like family J9312_15750 PF00342 Phosphoglucose isomerase J9312_15755 PF00465 Iron-containing alcohol dehydrogenase J9312_15760 PF00465 Iron-containing alcohol dehydrogenase J9312_15765 PF04070 Domain of unknown function (DUF378) J9312_15770 PF00575 S1 RNA binding domain J9312_15775 PF00155 Aminotransferase class I and II J9312_15780 PF01037 Lrp/AsnC ligand binding domain J9312_15785 PF00561 alpha/beta hydrolase fold J9312_15785 PF08386 TAP-like protein J9312_15790 PF08958 Domain of unknown function (DUF1871) J9312_15795 PF00155 Aminotransferase class I and II J9312_15800 PF00512 His Kinase A (phospho-acceptor) domain J9312_15800 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J9312_15805 PF08810 Kinase associated protein B J9312_15810 PF00929 Exonuclease J9312_15815 PF07690 Major Facilitator Superfamily J9312_15820 PF00912 Transglycosylase J9312_15820 PF00905 Penicillin binding protein transpeptidase domain J9312_15825 PF04134 Protein of unknown function, DUF393 J9312_15830 PF17328 Family of unknown function (DUF5366) J9312_15835 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J9312_15835 PF17203 Single cache domain 3 J9312_15835 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain J9312_15835 PF00989 PAS fold J9312_15840 PF00072 Response regulator receiver domain J9312_15845 PF02608 ABC transporter substrate-binding protein PnrA-like J9312_15850 PF00005 ABC transporter J9312_15855 PF02653 Branched-chain amino acid transport system / permease component J9312_15860 PF02653 Branched-chain amino acid transport system / permease component J9312_15865 PF03390 2-hydroxycarboxylate transporter family J9312_15875 PF13244 Domain of unknown function (DUF4040) J9312_15875 PF00361 Proton-conducting membrane transporter J9312_15875 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus J9312_15880 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter J9312_15885 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L J9312_15890 PF00361 Proton-conducting membrane transporter J9312_15895 PF01899 Na+/H+ ion antiporter subunit J9312_15900 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) J9312_15905 PF03334 Na+/H+ antiporter subunit J9312_15910 PF03061 Thioesterase superfamily J9312_15915 PF00196 Bacterial regulatory proteins, luxR family J9312_15915 PF00072 Response regulator receiver domain J9312_15925 PF00872 Transposase, Mutator family J9312_15940 PF00348 Polyprenyl synthetase J9312_15945 PF08181 DegQ (SacQ) family J9312_15960 PF00563 EAL domain J9312_15960 PF08668 HDOD domain J9312_15965 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family J9312_15965 PF17956 Nicotinate phosphoribosyltransferase C-terminal domain J9312_15965 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain J9312_15970 PF00857 Isochorismatase family J9312_15975 PF07997 Protein of unknown function (DUF1694) J9312_15980 PF14166 YueH-like protein J9312_15985 PF10676 Spore germination protein gerPA/gerPF J9312_15990 PF01594 AI-2E family transporter J9312_15995 PF10049 Protein of unknown function (DUF2283) J9312_16000 PF10842 Protein of unknown function (DUF2642) J9312_16005 PF01966 HD domain J9312_16010 PF00106 short chain dehydrogenase J9312_16015 PF17355 Family of unknown function (DUF5383) J9312_16025 PF01580 FtsK/SpoIIIE family J9312_16025 PF12538 DNA transporter J9312_16030 PF10140 WXG100 protein secretion system (Wss), protein YukC J9312_16035 PF08817 WXG100 protein secretion system (Wss), protein YukD J9312_16040 PF06013 Proteins of 100 residues with WXG J9312_16045 PF06018 CodY GAF-like domain J9312_16045 PF17853 GGDEF-like domain J9312_16045 PF13556 PucR C-terminal helix-turn-helix domain J9312_16050 PF01262 Alanine dehydrogenase/PNT, C-terminal domain J9312_16050 PF05222 Alanine dehydrogenase/PNT, N-terminal domain J9312_16055 PF10042 Uncharacterized conserved protein (DUF2278) J9312_16060 PF03621 MbtH-like protein J9312_16065 PF00975 Thioesterase domain J9312_16065 PF00501 AMP-binding enzyme J9312_16065 PF13193 AMP-binding enzyme C-terminal domain J9312_16065 PF00550 Phosphopantetheine attachment site J9312_16065 PF00668 Condensation domain J9312_16070 PF00857 Isochorismatase family J9312_16070 PF00550 Phosphopantetheine attachment site J9312_16075 PF00501 AMP-binding enzyme J9312_16075 PF13193 AMP-binding enzyme C-terminal domain J9312_16080 PF00425 chorismate binding enzyme J9312_16085 PF00106 short chain dehydrogenase J9312_16090 PF00756 Putative esterase J9312_16095 PF00174 Oxidoreductase molybdopterin binding domain J9312_16100 PF02632 BioY family J9312_16105 PF13726 Na+-H+ antiporter family J9312_16105 PF03553 Na+/H+ antiporter family J9312_16110 PF00883 Cytosol aminopeptidase family, catalytic domain J9312_16110 PF02789 Cytosol aminopeptidase family, N-terminal domain J9312_16115 PF02681 Divergent PAP2 family J9312_16120 PF06725 3D domain J9312_16125 PF14068 Putative membrane protein J9312_16130 PF17302 Family of unknown function (DUF5351) J9312_16135 PF07992 Pyridine nucleotide-disulphide oxidoreductase J9312_16140 PF07992 Pyridine nucleotide-disulphide oxidoreductase J9312_16150 PF00478 IMP dehydrogenase / GMP reductase domain J9312_16155 PF04299 Putative FMN-binding domain J9312_16160 PF00583 Acetyltransferase (GNAT) family J9312_16165 PF01521 Iron-sulphur cluster biosynthesis J9312_16170 PF01678 Diaminopimelate epimerase J9312_16175 PF07662 Na+ dependent nucleoside transporter C-terminus J9312_16175 PF01773 Na+ dependent nucleoside transporter N-terminus J9312_16180 PF07293 Protein of unknown function (DUF1450) J9312_16185 PF07992 Pyridine nucleotide-disulphide oxidoreductase J9312_16190 PF07315 Protein of unknown function (DUF1462) J9312_16195 PF01106 NifU-like domain J9312_16200 PF07676 WD40-like Beta Propeller Repeat J9312_16200 PF00326 Prolyl oligopeptidase family J9312_16205 PF08544 GHMP kinases C terminal J9312_16205 PF00288 GHMP kinases N terminal domain J9312_16210 PF00291 Pyridoxal-phosphate dependent enzyme J9312_16215 PF01842 ACT domain J9312_16215 PF00742 Homoserine dehydrogenase J9312_16215 PF03447 Homoserine dehydrogenase, NAD binding domain J9312_16225 PF04608 Phosphatidylglycerophosphatase A J9312_16230 PF13344 Haloacid dehalogenase-like hydrolase J9312_16235 PF01934 Protein of unknown function DUF86 J9312_16240 PF06265 Protein of unknown function (DUF1027) J9312_16245 PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) J9312_16250 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family J9312_16250 PF04055 Radical SAM superfamily J9312_16255 PF01551 Peptidase family M23 J9312_16260 PF09560 Sporulation protein YunB (Spo_YunB) J9312_16265 PF08827 Domain of unknown function (DUF1805) J9312_16270 PF02872 5'-nucleotidase, C-terminal domain J9312_16275 PF01925 Sulfite exporter TauE/SafE J9312_16280 PF01904 Protein of unknown function DUF72 J9312_16290 PF01979 Amidohydrolase family J9312_16295 PF13556 PucR C-terminal helix-turn-helix domain J9312_16295 PF07905 Purine catabolism regulatory protein-like family J9312_16295 PF17853 GGDEF-like domain J9312_16300 PF00860 Permease family J9312_16305 PF00860 Permease family J9312_16310 PF09349 OHCU decarboxylase J9312_16310 PF01014 Uricase J9312_16315 PF00576 HIUase/Transthyretin family J9312_16320 PF09680 Family of unknown function J9312_16325 PF00111 2Fe-2S iron-sulfur cluster binding domain J9312_16325 PF01799 [2Fe-2S] binding domain J9312_16330 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain J9312_16330 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase J9312_16335 PF00941 FAD binding domain in molybdopterin dehydrogenase J9312_16340 PF12804 MobA-like NTP transferase domain J9312_16345 PF02625 XdhC and CoxI family J9312_16345 PF13478 XdhC Rossmann domain J9312_16350 PF00266 Aminotransferase class-V J9312_16355 PF01546 Peptidase family M20/M25/M40 J9312_16365 PF04231 Endonuclease I J9312_16370 PF00005 ABC transporter J9312_16370 PF17912 MalK OB fold domain J9312_16370 PF03459 TOBE domain J9312_16375 PF07702 UTRA domain J9312_16375 PF00392 Bacterial regulatory proteins, gntR family J9312_16380 PF00294 pfkB family carbohydrate kinase J9312_16385 PF00528 Binding-protein-dependent transport system inner membrane component J9312_16390 PF00528 Binding-protein-dependent transport system inner membrane component J9312_16395 PF01547 Bacterial extracellular solute-binding protein J9312_16400 PF01380 SIS domain J9312_16405 PF01541 GIY-YIG catalytic domain J9312_16410 PF01266 FAD dependent oxidoreductase J9312_16430 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily J9312_16440 PF01458 Uncharacterized protein family (UPF0051) J9312_16445 PF01592 NifU-like N terminal domain J9312_16450 PF00266 Aminotransferase class-V J9312_16455 PF01458 Uncharacterized protein family (UPF0051) J9312_16460 PF00005 ABC transporter J9312_16470 PF02627 Carboxymuconolactone decarboxylase family J9312_16475 PF03180 NLPA lipoprotein J9312_16480 PF00528 Binding-protein-dependent transport system inner membrane component J9312_16485 PF00005 ABC transporter J9312_16485 PF09383 NIL domain J9312_16490 PF02036 SCP-2 sterol transfer family J9312_16495 PF00085 Thioredoxin J9312_16500 PF01751 Toprim domain J9312_16505 PF10830 Protein of unknown function (DUF2553) J9312_16510 PF01597 Glycine cleavage H-protein J9312_16515 PF03960 ArsC family J9312_16520 PF00441 Acyl-CoA dehydrogenase, C-terminal domain J9312_16520 PF02770 Acyl-CoA dehydrogenase, middle domain J9312_16520 PF02771 Acyl-CoA dehydrogenase, N-terminal domain J9312_16525 PF02803 Thiolase, C-terminal domain J9312_16525 PF00108 Thiolase, N-terminal domain J9312_16530 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain J9312_16530 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain J9312_16530 PF00378 Enoyl-CoA hydratase/isomerase J9312_16535 PF14115 YuzL-like protein J9312_16540 PF01619 Proline dehydrogenase J9312_16550 PF07875 Coat F domain J9312_16555 PF01047 MarR family J9312_16560 PF07690 Major Facilitator Superfamily J9312_16565 PF14552 Tautomerase enzyme J9312_16575 PF03466 LysR substrate binding domain J9312_16575 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J9312_16580 PF10835 Protein of unknown function (DUF2573) J9312_16585 PF00005 ABC transporter J9312_16590 PF14039 YusW-like protein J9312_16600 PF00872 Transposase, Mutator family J9312_16610 PF00005 ABC transporter J9312_16645 PF00155 Aminotransferase class I and II J9312_16655 PF00210 Ferritin-like domain J9312_16660 PF00872 Transposase, Mutator family J9312_16665 PF13180 PDZ domain J9312_16670 PF00486 Transcriptional regulatory protein, C terminal J9312_16670 PF00072 Response regulator receiver domain J9312_16675 PF00512 His Kinase A (phospho-acceptor) domain J9312_16675 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J9312_16675 PF00672 HAMP domain J9312_16685 PF00440 Bacterial regulatory proteins, tetR family J9312_16690 PF00206 Lyase J9312_16690 PF10415 Fumarase C C-terminus J9312_16695 PF13113 Protein of unknown function (DUF3970) J9312_16700 PF03323 Bacillus/Clostridium GerA spore germination protein J9312_16705 PF03845 Spore germination protein J9312_16710 PF05504 Spore germination B3/ GerAC like, C-terminal J9312_16715 PF00196 Bacterial regulatory proteins, luxR family J9312_16715 PF00072 Response regulator receiver domain J9312_16720 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J9312_16720 PF07730 Histidine kinase J9312_16720 PF00672 HAMP domain J9312_16725 PF09922 Cell wall-active antibiotics response 4TMS YvqF J9312_16730 PF13349 Putative adhesin J9312_16735 PF04012 PspA/IM30 family J9312_16745 PF07690 Major Facilitator Superfamily J9312_16750 PF01923 Cobalamin adenosyltransferase J9312_16755 PF00005 ABC transporter J9312_16760 PF01032 FecCD transport family J9312_16765 PF01497 Periplasmic binding protein J9312_16770 PF00106 short chain dehydrogenase J9312_16775 PF08450 SMP-30/Gluconolactonase/LRE-like region J9312_16780 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J9312_16780 PF00512 His Kinase A (phospho-acceptor) domain J9312_16785 PF00072 Response regulator receiver domain J9312_16785 PF00486 Transcriptional regulatory protein, C terminal J9312_16795 PF04545 Sigma-70, region 4 J9312_16800 PF12841 YvrJ protein family J9312_16805 PF00190 Cupin J9312_16810 PF14184 Regulatory protein YrvL J9312_16815 PF02687 FtsX-like permease family J9312_16815 PF12704 MacB-like periplasmic core domain J9312_16820 PF00005 ABC transporter J9312_16825 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion J9312_16830 PF00005 ABC transporter J9312_16835 PF01032 FecCD transport family J9312_16840 PF01032 FecCD transport family J9312_16845 PF01497 Periplasmic binding protein J9312_16850 PF13520 Amino acid permease J9312_16855 PF09575 Small spore protein J (Spore_SspJ) J9312_16860 PF04307 LexA-binding, inner membrane-associated putative hydrolase J9312_16865 PF00884 Sulfatase J9312_16870 PF12728 Helix-turn-helix domain J9312_16870 PF12727 PBP superfamily domain J9312_16880 PF00528 Binding-protein-dependent transport system inner membrane component J9312_16885 PF00248 Aldo/keto reductase family J9312_16895 PF00999 Sodium/hydrogen exchanger family J9312_16900 PF01077 Nitrite and sulphite reductase 4Fe-4S domain J9312_16900 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain J9312_16905 PF00258 Flavodoxin J9312_16905 PF00175 Oxidoreductase NAD-binding domain J9312_16905 PF00667 FAD binding domain J9312_16910 PF13538 UvrD-like helicase C-terminal domain J9312_16920 PF03458 UPF0126 domain J9312_16925 PF02600 Disulfide bond formation protein DsbB J9312_16930 PF13462 Thioredoxin J9312_16935 PF00403 Heavy-metal-associated domain J9312_16940 PF00403 Heavy-metal-associated domain J9312_16945 PF00403 Heavy-metal-associated domain J9312_16950 PF02583 Metal-sensitive transcriptional repressor J9312_16960 PF02525 Flavodoxin-like fold J9312_16970 PF17314 Family of unknown function (DUF5360) J9312_16975 PF00893 Small Multidrug Resistance protein J9312_16980 PF00440 Bacterial regulatory proteins, tetR family J9312_16985 PF00106 short chain dehydrogenase J9312_16995 PF14410 HNH/ENDO VII superfamily nuclease with conserved GHE residues J9312_16995 PF04740 LXG domain of WXG superfamily J9312_16995 PF14449 Pre-toxin TG J9312_17010 PF01471 Putative peptidoglycan binding domain J9312_17010 PF01476 LysM domain J9312_17010 PF01510 N-acetylmuramoyl-L-alanine amidase J9312_17015 PF05105 Bacteriophage holin family J9312_17040 PF05257 CHAP domain J9312_17040 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase J9312_17185 PF09643 YopX protein J9312_17220 PF17356 Phage-like element PBSX protein XtrA J9312_17295 PF01668 SmpB protein J9312_17300 PF17876 Cold shock domain J9312_17300 PF00575 S1 RNA binding domain J9312_17300 PF08206 Ribonuclease B OB domain J9312_17300 PF00773 RNB domain J9312_17305 PF12146 Serine aminopeptidase, S33 J9312_17310 PF03840 Preprotein translocase SecG subunit J9312_17315 PF00561 alpha/beta hydrolase fold J9312_17320 PF01381 Helix-turn-helix J9312_17335 PF01638 HxlR-like helix-turn-helix J9312_17340 PF12729 Four helix bundle sensory module for signal transduction J9312_17340 PF00672 HAMP domain J9312_17340 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J9312_17345 PF00528 Binding-protein-dependent transport system inner membrane component J9312_17350 PF04069 Substrate binding domain of ABC-type glycine betaine transport system J9312_17355 PF00528 Binding-protein-dependent transport system inner membrane component J9312_17360 PF00005 ABC transporter J9312_17360 PF00571 CBS domain J9312_17365 PF12802 MarR family J9312_17370 PF00528 Binding-protein-dependent transport system inner membrane component J9312_17375 PF04069 Substrate binding domain of ABC-type glycine betaine transport system J9312_17380 PF00528 Binding-protein-dependent transport system inner membrane component J9312_17385 PF00005 ABC transporter J9312_17385 PF00571 CBS domain J9312_17390 PF12802 MarR family J9312_17395 PF01914 MarC family integral membrane protein J9312_17400 PF11724 YvbH-like oligomerisation region J9312_17400 PF08000 Bacterial PH domain J9312_17410 PF13240 zinc-ribbon domain J9312_17415 PF00583 Acetyltransferase (GNAT) family J9312_17420 PF00113 Enolase, C-terminal TIM barrel domain J9312_17420 PF03952 Enolase, N-terminal domain J9312_17425 PF06415 BPG-independent PGAM N-terminus (iPGM_N) J9312_17425 PF01676 Metalloenzyme superfamily J9312_17430 PF00121 Triosephosphate isomerase J9312_17435 PF00162 Phosphoglycerate kinase J9312_17440 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain J9312_17440 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain J9312_17445 PF04198 Putative sugar-binding domain J9312_17450 PF00083 Sugar (and other) transporter J9312_17455 PF00392 Bacterial regulatory proteins, gntR family J9312_17460 PF00296 Luciferase-like monooxygenase J9312_17470 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J9312_17470 PF03466 LysR substrate binding domain J9312_17475 PF00892 EamA-like transporter family J9312_17480 PF00324 Amino acid permease J9312_17485 PF00704 Glycosyl hydrolases family 18 J9312_17490 PF02589 LUD domain J9312_17495 PF11870 Domain of unknown function (DUF3390) J9312_17495 PF13183 4Fe-4S dicluster domain J9312_17495 PF02589 LUD domain J9312_17500 PF02754 Cysteine-rich domain J9312_17505 PF00072 Response regulator receiver domain J9312_17505 PF00196 Bacterial regulatory proteins, luxR family J9312_17510 PF07730 Histidine kinase J9312_17510 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J9312_17520 PF00005 ABC transporter J9312_17525 PF12697 Alpha/beta hydrolase family J9312_17530 PF07228 Stage II sporulation protein E (SpoIIE) J9312_17530 PF13426 PAS domain J9312_17535 PF07745 Glycosyl hydrolase family 53 J9312_17540 PF08532 Beta-galactosidase trimerisation domain J9312_17540 PF08533 Beta-galactosidase C-terminal domain J9312_17540 PF02449 Beta-galactosidase J9312_17545 PF00528 Binding-protein-dependent transport system inner membrane component J9312_17550 PF00528 Binding-protein-dependent transport system inner membrane component J9312_17555 PF13416 Bacterial extracellular solute-binding protein J9312_17560 PF00356 Bacterial regulatory proteins, lacI family J9312_17565 PF00392 Bacterial regulatory proteins, gntR family J9312_17565 PF07729 FCD domain J9312_17570 PF02652 L-lactate permease J9312_17575 PF04552 Sigma-54, DNA binding domain J9312_17575 PF00309 Sigma-54 factor, Activator interacting domain (AID) J9312_17575 PF04963 Sigma-54 factor, core binding domain J9312_17580 PF09628 YvfG protein J9312_17585 PF04230 Polysaccharide pyruvyl transferase J9312_17590 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family J9312_17595 PF17836 PglD N-terminal domain J9312_17595 PF00132 Bacterial transferase hexapeptide (six repeats) J9312_17600 PF02397 Bacterial sugar transferase J9312_17605 PF14667 Polysaccharide biosynthesis C-terminal domain J9312_17605 PF01943 Polysaccharide biosynthesis protein J9312_17610 PF00535 Glycosyl transferase family 2 J9312_17615 PF04230 Polysaccharide pyruvyl transferase J9312_17620 PF00535 Glycosyl transferase family 2 J9312_17630 PF13439 Glycosyltransferase Family 4 J9312_17630 PF00534 Glycosyl transferases group 1 J9312_17635 PF00535 Glycosyl transferase family 2 J9312_17640 PF00534 Glycosyl transferases group 1 J9312_17640 PF13439 Glycosyltransferase Family 4 J9312_17645 PF02719 Polysaccharide biosynthesis protein J9312_17650 PF13614 AAA domain J9312_17655 PF02706 Chain length determinant protein J9312_17660 PF08671 Anti-repressor SinI J9312_17660 PF01381 Helix-turn-helix J9312_17665 PF00135 Carboxylesterase family J9312_17675 PF05870 Phenolic acid decarboxylase (PAD) J9312_17685 PF01177 Asp/Glu/Hydantoin racemase J9312_17695 PF02435 Levansucrase/Invertase J9312_17700 PF08244 Glycosyl hydrolases family 32 C terminal J9312_17700 PF00251 Glycosyl hydrolases family 32 N-terminal domain J9312_17705 PF13520 Amino acid permease J9312_17710 PF00440 Bacterial regulatory proteins, tetR family J9312_17710 PF17934 Tetracyclin repressor-like, C-terminal domain J9312_17715 PF00893 Small Multidrug Resistance protein J9312_17720 PF00893 Small Multidrug Resistance protein J9312_17740 PF01580 FtsK/SpoIIIE family J9312_17760 PF01471 Putative peptidoglycan binding domain J9312_17760 PF01476 LysM domain J9312_17760 PF01510 N-acetylmuramoyl-L-alanine amidase J9312_17765 PF10960 BhlA holin family J9312_17795 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase J9312_17795 PF13457 GW (Gly-Tryp) dipeptide domain J9312_17875 PF00589 Phage integrase family J9312_17985 PF00589 Phage integrase family J9312_17985 PF02899 Phage integrase, N-terminal SAM-like domain J9312_17995 PF00574 Clp protease J9312_18000 PF13419 Haloacid dehalogenase-like hydrolase J9312_18005 PF16657 Maltogenic Amylase, C-terminal domain J9312_18005 PF00128 Alpha amylase, catalytic domain J9312_18010 PF03636 Glycosyl hydrolase family 65, N-terminal domain J9312_18010 PF03632 Glycosyl hydrolase family 65 central catalytic domain J9312_18010 PF03633 Glycosyl hydrolase family 65, C-terminal domain J9312_18020 PF00528 Binding-protein-dependent transport system inner membrane component J9312_18025 PF00528 Binding-protein-dependent transport system inner membrane component J9312_18030 PF13416 Bacterial extracellular solute-binding protein J9312_18035 PF02903 Alpha amylase, N-terminal ig-like domain J9312_18035 PF00128 Alpha amylase, catalytic domain J9312_18040 PF00356 Bacterial regulatory proteins, lacI family J9312_18045 PF03641 Possible lysine decarboxylase J9312_18055 PF01740 STAS domain J9312_18055 PF00916 Sulfate permease family J9312_18060 PF00484 Carbonic anhydrase J9312_18065 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain J9312_18065 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain J9312_18070 PF02687 FtsX-like permease family J9312_18075 PF00005 ABC transporter J9312_18080 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J9312_18085 PF00072 Response regulator receiver domain J9312_18085 PF00486 Transcriptional regulatory protein, C terminal J9312_18095 PF00797 N-acetyltransferase J9312_18100 PF00381 PTS HPr component phosphorylation site J9312_18105 PF02650 WhiA C-terminal HTH domain J9312_18105 PF14527 WhiA LAGLIDADG-like domain J9312_18105 PF10298 WhiA N-terminal LAGLIDADG-like domain J9312_18110 PF01933 Uncharacterised protein family UPF0052 J9312_18115 PF03668 P-loop ATPase protein family J9312_18120 PF00293 NUDIX domain J9312_18125 PF07992 Pyridine nucleotide-disulphide oxidoreductase J9312_18130 PF00877 NlpC/P60 family J9312_18140 PF00005 ABC transporter J9312_18140 PF00664 ABC transporter transmembrane region J9312_18160 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase J9312_18160 PF01502 Phosphoribosyl-AMP cyclohydrolase J9312_18165 PF00977 Histidine biosynthesis protein J9312_18170 PF00977 Histidine biosynthesis protein J9312_18175 PF00117 Glutamine amidotransferase class-I J9312_18180 PF00475 Imidazoleglycerol-phosphate dehydratase J9312_18185 PF00815 Histidinol dehydrogenase J9312_18190 PF01634 ATP phosphoribosyltransferase J9312_18195 PF13393 Histidyl-tRNA synthetase J9312_18200 PF13529 Peptidase_C39 like family J9312_18205 PF03211 Pectate lyase J9312_18210 PF14602 Hexapeptide repeat of succinyl-transferase J9312_18215 PF13419 Haloacid dehalogenase-like hydrolase J9312_18220 PF07670 Nucleoside recognition J9312_18225 PF01790 Prolipoprotein diacylglyceryl transferase J9312_18230 PF02603 HPr Serine kinase N terminus J9312_18230 PF07475 HPr Serine kinase C-terminal domain J9312_18235 PF01979 Amidohydrolase family J9312_18240 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase J9312_18245 PF07702 UTRA domain J9312_18245 PF00392 Bacterial regulatory proteins, gntR family J9312_18250 PF00149 Calcineurin-like phosphoesterase J9312_18255 PF04020 Mycobacterial 4 TMS phage holin, superfamily IV J9312_18260 PF04024 PspC domain J9312_18265 PF13349 Putative adhesin J9312_18280 PF00669 Bacterial flagellin N-terminal helical region J9312_18280 PF00700 Bacterial flagellin C-terminal helical region J9312_18285 PF17760 UvrA interaction domain J9312_18285 PF00005 ABC transporter J9312_18285 PF17755 UvrA DNA-binding domain J9312_18290 PF00271 Helicase conserved C-terminal domain J9312_18290 PF02151 UvrB/uvrC motif J9312_18290 PF12344 Ultra-violet resistance protein B J9312_18290 PF17757 UvrB interaction domain J9312_18290 PF04851 Type III restriction enzyme, res subunit J9312_18295 PF09964 Uncharacterized protein conserved in bacteria (DUF2198) J9312_18300 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain J9312_18300 PF00391 PEP-utilising enzyme, mobile domain J9312_18305 PF00440 Bacterial regulatory proteins, tetR family J9312_18310 PF07690 Major Facilitator Superfamily J9312_18315 PF17820 PDZ domain J9312_18320 PF17423 Swarming motility protein J9312_18325 PF01471 Putative peptidoglycan binding domain J9312_18325 PF03572 Peptidase family S41 J9312_18325 PF17820 PDZ domain J9312_18330 PF18075 FtsX extracellular domain J9312_18330 PF02687 FtsX-like permease family J9312_18335 PF00005 ABC transporter J9312_18340 PF13442 Cytochrome C oxidase, cbb3-type, subunit III J9312_18345 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 J9312_18345 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) J9312_18355 PF02810 SEC-C motif J9312_18355 PF01043 SecA preprotein cross-linking domain J9312_18355 PF07516 SecA Wing and Scaffold domain J9312_18355 PF07517 SecA DEAD-like domain J9312_18360 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein J9312_18360 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus J9312_18375 PF02561 Flagellar protein FliS J9312_18380 PF07196 Flagellin hook IN motif J9312_18380 PF07195 Flagellar hook-associated protein 2 C-terminus J9312_18380 PF02465 Flagellar hook-associated protein 2 N-terminus J9312_18385 PF03646 FlaG protein J9312_18390 PF00669 Bacterial flagellin N-terminal helical region J9312_18390 PF00700 Bacterial flagellin C-terminal helical region J9312_18395 PF02599 Global regulator protein family J9312_18400 PF02623 FliW protein J9312_18410 PF00700 Bacterial flagellin C-terminal helical region J9312_18410 PF00669 Bacterial flagellin N-terminal helical region J9312_18415 PF06429 Flagellar basal body rod FlgEFG protein C-terminal J9312_18415 PF00460 Flagella basal body rod protein J9312_18420 PF05130 FlgN protein J9312_18425 PF04316 Anti-sigma-28 factor, FlgM J9312_18440 PF10719 Late competence development protein ComFB J9312_18445 PF00271 Helicase conserved C-terminal domain J9312_18445 PF04851 Type III restriction enzyme, res subunit J9312_18450 PF02645 Uncharacterised protein, DegV family COG1307 J9312_18455 PF00072 Response regulator receiver domain J9312_18455 PF00196 Bacterial regulatory proteins, luxR family J9312_18460 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J9312_18460 PF07730 Histidine kinase J9312_18460 PF05384 Sensor protein DegS J9312_18465 PF09186 Domain of unknown function (DUF1949) J9312_18465 PF01205 Uncharacterized protein family UPF0029 J9312_18470 PF03816 Cell envelope-related transcriptional attenuator domain J9312_18500 PF00005 ABC transporter J9312_18510 PF00953 Glycosyl transferase family 4 J9312_18520 PF00535 Glycosyl transferase family 2 J9312_18525 PF02706 Chain length determinant protein J9312_18530 PF04932 O-Antigen ligase J9312_18535 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain J9312_18535 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain J9312_18535 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain J9312_18540 PF00534 Glycosyl transferases group 1 J9312_18540 PF13439 Glycosyltransferase Family 4 J9312_18545 PF01943 Polysaccharide biosynthesis protein J9312_18545 PF14667 Polysaccharide biosynthesis C-terminal domain J9312_18550 PF02397 Bacterial sugar transferase J9312_18555 PF04122 Putative cell wall binding repeat 2 J9312_18555 PF01520 N-acetylmuramoyl-L-alanine amidase J9312_18560 PF04122 Putative cell wall binding repeat 2 J9312_18560 PF08486 Stage II sporulation protein J9312_18575 PF02350 UDP-N-acetylglucosamine 2-epimerase J9312_18580 PF00483 Nucleotidyl transferase J9312_18590 PF00005 ABC transporter J9312_18595 PF01061 ABC-2 type transporter J9312_18610 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase J9312_18610 PF00535 Glycosyl transferase family 2 J9312_18615 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase J9312_18620 PF01467 Cytidylyltransferase-like J9312_18625 PF03808 Glycosyl transferase WecB/TagA/CpsF family J9312_18630 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase J9312_18635 PF08239 Bacterial SH3 domain J9312_18635 PF05036 Sporulation related domain J9312_18635 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase J9312_18640 PF01238 Phosphomannose isomerase type I J9312_18645 PF03323 Bacillus/Clostridium GerA spore germination protein J9312_18650 PF03845 Spore germination protein J9312_18655 PF05504 Spore germination B3/ GerAC like, C-terminal J9312_18665 PF03816 Cell envelope-related transcriptional attenuator domain J9312_18675 PF00877 NlpC/P60 family J9312_18685 PF09587 Bacterial capsule synthesis protein PGA_cap J9312_18690 PF14102 Capsule biosynthesis CapC J9312_18695 PF08245 Mur ligase middle domain J9312_18700 PF00356 Bacterial regulatory proteins, lacI family J9312_18705 PF00294 pfkB family carbohydrate kinase J9312_18710 PF05025 RbsD / FucU transport protein family J9312_18715 PF00005 ABC transporter J9312_18720 PF02653 Branched-chain amino acid transport system / permease component J9312_18730 PF08239 Bacterial SH3 domain J9312_18735 PF13031 Protein of unknown function (DUF3892) J9312_18740 PF02525 Flavodoxin-like fold J9312_18745 PF03306 Alpha-acetolactate decarboxylase J9312_18750 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain J9312_18750 PF00205 Thiamine pyrophosphate enzyme, central domain J9312_18750 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain J9312_18755 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J9312_18755 PF03466 LysR substrate binding domain J9312_18760 PF02040 Arsenical pump membrane protein J9312_18775 PF08757 CotH kinase protein J9312_18785 PF01613 Flavin reductase like domain J9312_18790 PF13789 Domain of unknown function (DUF4181) J9312_18800 PF13404 AsnC-type helix-turn-helix domain J9312_18800 PF01037 Lrp/AsnC ligand binding domain J9312_18805 PF02417 Chromate transporter J9312_18810 PF02417 Chromate transporter J9312_18825 PF03466 LysR substrate binding domain J9312_18825 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J9312_18830 PF04493 Endonuclease V J9312_18855 PF04740 LXG domain of WXG superfamily J9312_18855 PF14431 YwqJ-like deaminase J9312_18855 PF14449 Pre-toxin TG J9312_18865 PF16888 Domain of unknown function (DUF5082) J9312_18875 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain J9312_18875 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain J9312_18875 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain J9312_18885 PF13614 AAA domain J9312_18890 PF13807 G-rich domain on putative tyrosine kinase J9312_18890 PF02706 Chain length determinant protein J9312_18900 PF04434 SWIM zinc finger J9312_18905 PF00176 SNF2 family N-terminal domain J9312_18905 PF00271 Helicase conserved C-terminal domain J9312_18905 PF12419 SNF2 Helicase protein J9312_18915 PF08220 DeoR-like helix-turn-helix domain J9312_18915 PF00455 DeoR C terminal sensor domain J9312_18920 PF00436 Single-strand binding protein family J9312_18930 PF14183 YwpF-like protein J9312_18935 PF04203 Sortase domain J9312_18945 PF06580 Histidine kinase J9312_18945 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J9312_18950 PF01741 Large-conductance mechanosensitive channel, MscL J9312_18955 PF07977 FabA-like domain J9312_18960 PF18801 response regulator aspartate phosphatase H, N terminal J9312_18965 PF06429 Flagellar basal body rod FlgEFG protein C-terminal J9312_18965 PF00460 Flagella basal body rod protein J9312_18970 PF00460 Flagella basal body rod protein J9312_18970 PF06429 Flagellar basal body rod FlgEFG protein C-terminal J9312_18980 PF12116 Stage III sporulation protein D J9312_18990 PF01047 MarR family J9312_18995 PF07690 Major Facilitator Superfamily J9312_19000 PF13229 Right handed beta helix region J9312_19005 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin J9312_19010 PF07690 Major Facilitator Superfamily J9312_19015 PF00857 Isochorismatase family J9312_19025 PF00909 Ammonium Transporter Family J9312_19030 PF00543 Nitrogen regulatory protein P-II J9312_19035 PF01569 PAP2 superfamily J9312_19040 PF04892 VanZ like family J9312_19045 PF01551 Peptidase family M23 J9312_19050 PF00583 Acetyltransferase (GNAT) family J9312_19055 PF17319 Family of unknown function (DUF5362) J9312_19060 PF03102 NeuB family J9312_19060 PF08666 SAF domain J9312_19065 PF17370 Family of unknown function (DUF5392) J9312_19070 PF13091 PLD-like domain J9312_19070 PF13396 Phospholipase_D-nuclease N-terminal J9312_19075 PF07739 TipAS antibiotic-recognition domain J9312_19075 PF13411 MerR HTH family regulatory protein J9312_19080 PF17319 Family of unknown function (DUF5362) J9312_19090 PF02082 Transcriptional regulator J9312_19095 PF00449 Urease alpha-subunit, N-terminal domain J9312_19095 PF01979 Amidohydrolase family J9312_19100 PF00699 Urease beta subunit J9312_19105 PF00547 Urease, gamma subunit J9312_19120 PF05532 CsbD-like J9312_19130 PF18801 response regulator aspartate phosphatase H, N terminal J9312_19130 PF17874 MalT-like TPR region J9312_19135 PF06463 Molybdenum Cofactor Synthesis C J9312_19135 PF04055 Radical SAM superfamily J9312_19140 PF02634 FdhD/NarQ family J9312_19150 PF00092 von Willebrand factor type A domain J9312_19160 PF00092 von Willebrand factor type A domain J9312_19165 PF08486 Stage II sporulation protein J9312_19170 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) J9312_19175 PF08680 TATA-box binding J9312_19180 PF06612 Protein of unknown function (DUF1146) J9312_19190 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain J9312_19190 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain J9312_19195 PF02874 ATP synthase alpha/beta family, beta-barrel domain J9312_19195 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain J9312_19200 PF00231 ATP synthase J9312_19205 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain J9312_19205 PF02874 ATP synthase alpha/beta family, beta-barrel domain J9312_19205 PF00306 ATP synthase alpha/beta chain, C terminal domain J9312_19210 PF00213 ATP synthase delta (OSCP) subunit J9312_19215 PF00430 ATP synthase B/B' CF(0) J9312_19220 PF00137 ATP synthase subunit C J9312_19225 PF00119 ATP synthase A chain J9312_19230 PF03899 ATP synthase I chain J9312_19240 PF00464 Serine hydroxymethyltransferase J9312_19245 PF04260 Protein of unknown function (DUF436) J9312_19250 PF02502 Ribose/Galactose Isomerase J9312_19255 PF01451 Low molecular weight phosphotyrosine protein phosphatase J9312_19260 PF02659 Putative manganese efflux pump J9312_19265 PF01300 Telomere recombination J9312_19265 PF03481 Putative GTP-binding controlling metal-binding J9312_19275 PF09551 Stage II sporulation protein R (spore_II_R) J9312_19280 PF17094 Uncharacterised protein family (UPF0715) J9312_19285 PF17247 Family of unknown function (DUF5316) J9312_19290 PF05175 Methyltransferase small domain J9312_19290 PF17827 PrmC N-terminal domain J9312_19295 PF03462 PCRF domain J9312_19295 PF00472 RF-1 domain J9312_19300 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily J9312_19305 PF13411 MerR HTH family regulatory protein J9312_19310 PF03547 Membrane transport protein J9312_19315 PF00390 Malic enzyme, N-terminal domain J9312_19315 PF03949 Malic enzyme, NAD binding domain J9312_19320 PF00265 Thymidine kinase J9312_19325 PF01197 Ribosomal protein L31 J9312_19330 PF07498 Rho termination factor, N-terminal domain J9312_19330 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain J9312_19330 PF07497 Rho termination factor, RNA-binding domain J9312_19340 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded J9312_19345 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) J9312_19350 PF00923 Transaldolase/Fructose-6-phosphate aldolase J9312_19355 PF01116 Fructose-bisphosphate aldolase class-II J9312_19360 PF00072 Response regulator receiver domain J9312_19365 PF10740 Domain of unknown function (DUF2529) J9312_19375 PF00117 Glutamine amidotransferase class-I J9312_19375 PF06418 CTP synthase N-terminus J9312_19380 PF05066 HB1, ASXL, restriction endonuclease HTH domain J9312_19385 PF00441 Acyl-CoA dehydrogenase, C-terminal domain J9312_19385 PF02770 Acyl-CoA dehydrogenase, middle domain J9312_19385 PF02771 Acyl-CoA dehydrogenase, N-terminal domain J9312_19390 PF13183 4Fe-4S dicluster domain J9312_19390 PF02754 Cysteine-rich domain J9312_19395 PF13091 PLD-like domain J9312_19400 PF03851 UV-endonuclease UvdE J9312_19410 PF01872 RibD C-terminal domain J9312_19420 PF13396 Phospholipase_D-nuclease N-terminal J9312_19420 PF13091 PLD-like domain J9312_19430 PF02665 Nitrate reductase gamma subunit J9312_19435 PF02613 Nitrate reductase delta subunit J9312_19440 PF13247 4Fe-4S dicluster domain J9312_19440 PF14711 Respiratory nitrate reductase beta C-terminal J9312_19445 PF00384 Molybdopterin oxidoreductase J9312_19445 PF01568 Molydopterin dinucleotide binding domain J9312_19445 PF14710 Respiratory nitrate reductase alpha N-terminal J9312_19455 PF14256 YwiC-like protein J9312_19460 PF00027 Cyclic nucleotide-binding domain J9312_19460 PF00325 Bacterial regulatory proteins, crp family J9312_19465 PF07690 Major Facilitator Superfamily J9312_19470 PF00750 tRNA synthetases class I (R) J9312_19470 PF03485 Arginyl tRNA synthetase N terminal domain J9312_19470 PF05746 DALR anticodon binding domain J9312_19475 PF09148 Domain of unknown function (DUF1934) J9312_19480 PF11420 Bacteriocin subtilosin A J9312_19490 PF13186 Iron-sulfur cluster-binding domain J9312_19490 PF04055 Radical SAM superfamily J9312_19490 PF05402 Coenzyme PQQ synthesis protein D (PqqD) J9312_19500 PF00005 ABC transporter J9312_19510 PF05193 Peptidase M16 inactive domain J9312_19515 PF00675 Insulinase (Peptidase family M16) J9312_19535 PF18801 response regulator aspartate phosphatase H, N terminal J9312_19540 PF11131 Rap-phr extracellular signalling J9312_19545 PF04073 Aminoacyl-tRNA editing domain J9312_19550 PF00491 Arginase family J9312_19555 PF17284 Spermidine synthase tetramerisation domain J9312_19560 PF00912 Transglycosylase J9312_19560 PF00905 Penicillin binding protein transpeptidase domain J9312_19565 PF08741 YwhD family J9312_19570 PF02163 Peptidase family M50 J9312_19575 PF01361 Tautomerase enzyme J9312_19580 PF01047 MarR family J9312_19585 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain J9312_19585 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) J9312_19585 PF03129 Anticodon binding domain J9312_19585 PF02824 TGS domain J9312_19590 PF07690 Major Facilitator Superfamily J9312_19595 PF02082 Transcriptional regulator J9312_19605 PF01966 HD domain J9312_19610 PF07293 Protein of unknown function (DUF1450) J9312_19620 PF00892 EamA-like transporter family J9312_19625 PF03099 Biotin/lipoate A/B protein ligase family J9312_19630 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J9312_19630 PF03466 LysR substrate binding domain J9312_19635 PF01515 Phosphate acetyl/butaryl transferase J9312_19640 PF06778 Chlorite dismutase J9312_19650 PF00155 Aminotransferase class I and II J9312_19655 PF07690 Major Facilitator Superfamily J9312_19670 PF07883 Cupin domain J9312_19680 PF07690 Major Facilitator Superfamily J9312_19685 PF00324 Amino acid permease J9312_19690 PF01546 Peptidase family M20/M25/M40 J9312_19695 PF00171 Aldehyde dehydrogenase family J9312_19700 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain J9312_19700 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase J9312_19705 PF17735 Biofilm surface layer A J9312_19710 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase J9312_19715 PF04321 RmlD substrate binding domain J9312_19720 PF16363 GDP-mannose 4,6 dehydratase J9312_19725 PF00483 Nucleotidyl transferase J9312_19730 PF04101 Glycosyltransferase family 28 C-terminal domain J9312_19735 PF02348 Cytidylyltransferase J9312_19740 PF08666 SAF domain J9312_19740 PF03102 NeuB family J9312_19745 PF00583 Acetyltransferase (GNAT) family J9312_19750 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family J9312_19755 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase J9312_19760 PF00535 Glycosyl transferase family 2 J9312_19770 PF09671 Spore coat protein (Spore_GerQ) J9312_19775 PF04241 Protein of unknown function (DUF423) J9312_19780 PF00860 Permease family J9312_19785 PF17261 Family of unknown function (DUF5327) J9312_19790 PF00171 Aldehyde dehydrogenase family J9312_19795 PF03167 Uracil DNA glycosylase superfamily J9312_19800 PF00535 Glycosyl transferase family 2 J9312_19815 PF03551 Transcriptional regulator PadR-like family J9312_19820 PF08543 Phosphomethylpyrimidine kinase J9312_19830 PF00251 Glycosyl hydrolases family 32 N-terminal domain J9312_19830 PF08244 Glycosyl hydrolases family 32 C terminal J9312_19835 PF02378 Phosphotransferase system, EIIC J9312_19835 PF00367 phosphotransferase system, EIIB J9312_19840 PF01226 Formate/nitrite transporter J9312_19845 PF03123 CAT RNA binding domain J9312_19845 PF00874 PRD domain J9312_19855 PF13860 FlgD Ig-like domain J9312_19855 PF05922 Peptidase inhibitor I9 J9312_19855 PF00082 Subtilase family J9312_19855 PF02225 PA domain J9312_19860 PF00296 Luciferase-like monooxygenase J9312_19865 PF00881 Nitroreductase family J9312_19870 PF01098 Cell cycle protein J9312_19880 PF17368 Spore morphogenesis and germination YwcE J9312_19885 PF03626 Prokaryotic Cytochrome C oxidase subunit IV J9312_19890 PF00510 Cytochrome c oxidase subunit III J9312_19895 PF00115 Cytochrome C and Quinol oxidase polypeptide I J9312_19900 PF00116 Cytochrome C oxidase subunit II, periplasmic domain J9312_19900 PF02790 Cytochrome C oxidase subunit II, transmembrane domain J9312_19905 PF04226 Transglycosylase associated protein J9312_19910 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain J9312_19910 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain J9312_19915 PF00288 GHMP kinases N terminal domain J9312_19915 PF08544 GHMP kinases C terminal J9312_19915 PF10509 Galactokinase galactose-binding signature J9312_19920 PF04138 GtrA-like protein J9312_19925 PF00440 Bacterial regulatory proteins, tetR family J9312_19930 PF08671 Anti-repressor SinI J9312_19935 PF04341 Protein of unknown function, DUF485 J9312_19940 PF00474 Sodium:solute symporter family J9312_19945 PF01323 DSBA-like thioredoxin domain J9312_19950 PF04261 Dyp-type peroxidase family J9312_19950 PF10518 TAT (twin-arginine translocation) pathway signal sequence J9312_19955 PF09375 Imelysin J9312_19960 PF03239 Iron permease FTR1 family J9312_19965 PF02581 Thiamine monophosphate synthase J9312_19970 PF02110 Hydroxyethylthiazole kinase family J9312_19975 PF03466 LysR substrate binding domain J9312_19975 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J9312_19980 PF03788 LrgA family J9312_19985 PF04172 LrgB-like family J9312_19990 PF12832 MFS_1 like family J9312_19995 PF09962 Uncharacterized conserved protein (DUF2196) J9312_20000 PF10672 S-adenosylmethionine-dependent methyltransferase J9312_20000 PF17785 PUA-like domain J9312_20005 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily J9312_20010 PF10924 Protein of unknown function (DUF2711) J9312_20015 PF02378 Phosphotransferase system, EIIC J9312_20020 PF00082 Subtilase family J9312_20025 PF02378 Phosphotransferase system, EIIC J9312_20025 PF00367 phosphotransferase system, EIIB J9312_20030 PF03123 CAT RNA binding domain J9312_20030 PF00874 PRD domain J9312_20035 PF01501 Glycosyl transferase family 8 J9312_20040 PF09529 Integral membrane protein (intg_mem_TP0381) J9312_20045 PF01047 MarR family J9312_20050 PF00579 tRNA synthetases class I (W and Y) J9312_20050 PF01479 S4 domain J9312_20055 PF04389 Peptidase family M28 J9312_20055 PF02225 PA domain J9312_20060 PF04607 Region found in RelA / SpoT proteins J9312_20070 PF01040 UbiA prenyltransferase family J9312_20080 PF12459 D-Ala-teichoic acid biosynthesis protein J9312_20085 PF00501 AMP-binding enzyme J9312_20085 PF13193 AMP-binding enzyme C-terminal domain J9312_20090 PF03062 MBOAT, membrane-bound O-acyltransferase family J9312_20095 PF00550 Phosphopantetheine attachment site J9312_20100 PF04914 DltD protein J9312_20105 PF00106 short chain dehydrogenase J9312_20110 PF01063 Amino-transferase class IV J9312_20115 PF11975 Family 4 glycosyl hydrolase C-terminal domain J9312_20115 PF02056 Family 4 glycosyl hydrolase J9312_20120 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit J9312_20125 PF02378 Phosphotransferase system, EIIC J9312_20130 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit J9312_20135 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 J9312_20135 PF00874 PRD domain J9312_20135 PF08279 HTH domain J9312_20135 PF05043 Mga helix-turn-helix domain J9312_20145 PF02245 Methylpurine-DNA glycosylase (MPG) J9312_20150 PF06628 Catalase-related immune-responsive J9312_20150 PF00199 Catalase J9312_20155 PF07690 Major Facilitator Superfamily J9312_20160 PF12679 ABC-2 family transporter protein J9312_20165 PF13732 Domain of unknown function (DUF4162) J9312_20165 PF00005 ABC transporter J9312_20170 PF13396 Phospholipase_D-nuclease N-terminal J9312_20180 PF17280 Family of unknown function (DUF5345) J9312_20185 PF08281 Sigma-70, region 4 J9312_20185 PF04542 Sigma-70 region 2 J9312_20190 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin J9312_20195 PF01256 Carbohydrate kinase J9312_20200 PF00664 ABC transporter transmembrane region J9312_20200 PF00005 ABC transporter J9312_20205 PF00005 ABC transporter J9312_20205 PF00664 ABC transporter transmembrane region J9312_20210 PF02322 Cytochrome bd terminal oxidase subunit II J9312_20215 PF01654 Cytochrome bd terminal oxidase subunit I J9312_20220 PF03390 2-hydroxycarboxylate transporter family J9312_20225 PF01435 Peptidase family M48 J9312_20235 PF01522 Polysaccharide deacetylase J9312_20245 PF03459 TOBE domain J9312_20245 PF17912 MalK OB fold domain J9312_20245 PF00005 ABC transporter J9312_20250 PF13556 PucR C-terminal helix-turn-helix domain J9312_20255 PF00171 Aldehyde dehydrogenase family J9312_20260 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) J9312_20260 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 J9312_20265 PF16363 GDP-mannose 4,6 dehydratase J9312_20275 PF07730 Histidine kinase J9312_20280 PF00072 Response regulator receiver domain J9312_20280 PF00196 Bacterial regulatory proteins, luxR family J9312_20285 PF01546 Peptidase family M20/M25/M40 J9312_20285 PF07687 Peptidase dimerisation domain J9312_20295 PF04525 LURP-one-related J9312_20300 PF01717 Cobalamin-independent synthase, Catalytic domain J9312_20305 PF01717 Cobalamin-independent synthase, Catalytic domain J9312_20315 PF01144 Coenzyme A transferase J9312_20320 PF01144 Coenzyme A transferase J9312_20330 PF08241 Methyltransferase domain J9312_20335 PF01773 Na+ dependent nucleoside transporter N-terminus J9312_20335 PF07662 Na+ dependent nucleoside transporter C-terminus J9312_20350 PF06628 Catalase-related immune-responsive J9312_20350 PF18011 C-terminal domain found in long catalases J9312_20350 PF00199 Catalase J9312_20355 PF03600 Citrate transporter J9312_20360 PF00722 Glycosyl hydrolases family 16 J9312_20365 PF00874 PRD domain J9312_20365 PF03123 CAT RNA binding domain J9312_20375 PF11700 Vacuole effluxer Atg22 like J9312_20380 PF03880 DbpA RNA binding domain J9312_20380 PF00271 Helicase conserved C-terminal domain J9312_20380 PF00270 DEAD/DEAH box helicase J9312_20385 PF13472 GDSL-like Lipase/Acylhydrolase family J9312_20400 PF14176 YxiJ-like protein J9312_20420 PF10898 Protein of unknown function (DUF2716) J9312_20495 PF14176 YxiJ-like protein J9312_20500 PF05593 RHS Repeat J9312_20505 PF00892 EamA-like transporter family J9312_20510 PF00582 Universal stress protein family J9312_20520 PF18593 CdiI immunity protein J9312_20530 PF04740 LXG domain of WXG superfamily J9312_20530 PF14449 Pre-toxin TG J9312_20540 PF16888 Domain of unknown function (DUF5082) J9312_20550 PF00145 C-5 cytosine-specific DNA methylase J9312_20565 PF04616 Glycosyl hydrolases family 43 J9312_20565 PF16369 C-terminal lipocalin-like domain J9312_20575 PF01979 Amidohydrolase family J9312_20580 PF00491 Arginase family J9312_20585 PF00324 Amino acid permease J9312_20590 PF00591 Glycosyl transferase family, a/b domain J9312_20590 PF02885 Glycosyl transferase family, helical bundle domain J9312_20590 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain J9312_20595 PF07662 Na+ dependent nucleoside transporter C-terminus J9312_20595 PF01773 Na+ dependent nucleoside transporter N-terminus J9312_20600 PF01791 DeoC/LacD family aldolase J9312_20605 PF04198 Putative sugar-binding domain J9312_20610 PF06724 Domain of Unknown Function (DUF1206) J9312_20615 PF04346 Ethanolamine utilisation protein, EutH J9312_20620 PF03972 MmgE/PrpD family J9312_20625 PF07687 Peptidase dimerisation domain J9312_20625 PF01546 Peptidase family M20/M25/M40 J9312_20630 PF00005 ABC transporter J9312_20635 PF00528 Binding-protein-dependent transport system inner membrane component J9312_20640 PF00497 Bacterial extracellular solute-binding proteins, family 3 J9312_20645 PF00583 Acetyltransferase (GNAT) family J9312_20650 PF00296 Luciferase-like monooxygenase J9312_20655 PF02275 Linear amide C-N hydrolases, choloylglycine hydrolase family J9312_20670 PF11631 Protein of unknown function (DUF3255) J9312_20690 PF01497 Periplasmic binding protein J9312_20695 PF06486 Protein of unknown function (DUF1093) J9312_20700 PF02687 FtsX-like permease family J9312_20705 PF00005 ABC transporter J9312_20710 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J9312_20720 PF01116 Fructose-bisphosphate aldolase class-II J9312_20725 PF01261 Xylose isomerase-like TIM barrel J9312_20730 PF01261 Xylose isomerase-like TIM barrel J9312_20735 PF02894 Oxidoreductase family, C-terminal alpha/beta domain J9312_20735 PF01408 Oxidoreductase family, NAD-binding Rossmann fold J9312_20745 PF01261 Xylose isomerase-like TIM barrel J9312_20750 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain J9312_20750 PF00205 Thiamine pyrophosphate enzyme, central domain J9312_20750 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain J9312_20755 PF00294 pfkB family carbohydrate kinase J9312_20760 PF04962 KduI/IolB family J9312_20765 PF00171 Aldehyde dehydrogenase family J9312_20770 PF00455 DeoR C terminal sensor domain J9312_20770 PF08220 DeoR-like helix-turn-helix domain J9312_20775 PF00248 Aldo/keto reductase family J9312_20785 PF10850 Protein of unknown function (DUF2653) J9312_20790 PF00083 Sugar (and other) transporter J9312_20795 PF00183 Hsp90 protein J9312_20825 PF01381 Helix-turn-helix J9312_20830 PF00664 ABC transporter transmembrane region J9312_20830 PF03412 Peptidase C39 family J9312_20830 PF00005 ABC transporter J9312_20845 PF00440 Bacterial regulatory proteins, tetR family J9312_20850 PF00171 Aldehyde dehydrogenase family J9312_20855 PF06271 RDD family J9312_20860 PF17369 Family of unknown function (DUF5391) J9312_20865 PF06271 RDD family J9312_20870 PF04235 Protein of unknown function (DUF418) J9312_20875 PF07883 Cupin domain J9312_20880 PF00440 Bacterial regulatory proteins, tetR family J9312_20885 PF00106 short chain dehydrogenase J9312_20890 PF01047 MarR family J9312_20895 PF03788 LrgA family J9312_20900 PF04172 LrgB-like family J9312_20905 PF04230 Polysaccharide pyruvyl transferase J9312_20910 PF02595 Glycerate kinase family J9312_20915 PF07729 FCD domain J9312_20915 PF00392 Bacterial regulatory proteins, gntR family J9312_20920 PF00370 FGGY family of carbohydrate kinases, N-terminal domain J9312_20920 PF02782 FGGY family of carbohydrate kinases, C-terminal domain J9312_20925 PF02447 GntP family permease J9312_20930 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase J9312_20930 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain J9312_20935 PF00578 AhpC/TSA family J9312_20940 PF13192 Thioredoxin domain J9312_20940 PF07992 Pyridine nucleotide-disulphide oxidoreductase J9312_20945 PF00232 Glycosyl hydrolase family 1 J9312_20955 PF07702 UTRA domain J9312_20955 PF00392 Bacterial regulatory proteins, gntR family J9312_20970 PF00005 ABC transporter J9312_20975 PF06874 Firmicute fructose-1,6-bisphosphatase J9312_20990 PF00011 Hsp20/alpha crystallin family J9312_21005 PF01695 IstB-like ATP binding protein J9312_21010 PF00665 Integrase core domain J9312_21025 PF00580 UvrD/REP helicase N-terminal domain J9312_21025 PF13361 UvrD-like helicase C-terminal domain J9312_21030 PF13361 UvrD-like helicase C-terminal domain J9312_21030 PF00580 UvrD/REP helicase N-terminal domain J9312_21055 PF02590 Predicted SPOUT methyltransferase J9312_21060 PF14116 YyzF-like protein J9312_21070 PF08240 Alcohol dehydrogenase GroES-like domain J9312_21070 PF00107 Zinc-binding dehydrogenase J9312_21095 PF00583 Acetyltransferase (GNAT) family J9312_21100 PF18801 response regulator aspartate phosphatase H, N terminal J9312_21110 PF00491 Arginase family J9312_21115 PF00324 Amino acid permease J9312_21120 PF00202 Aminotransferase class-III J9312_21135 PF17418 Sporulation delaying protein SdpA J9312_21140 PF13630 SdpI/YhfL protein family J9312_21140 PF07853 Protein of unknown function (DUF1648) J9312_21145 PF01022 Bacterial regulatory protein, arsR family J9312_21150 PF13426 PAS domain J9312_21150 PF02954 Bacterial regulatory protein, Fis family J9312_21150 PF00158 Sigma-54 interaction domain J9312_21165 PF13180 PDZ domain J9312_21170 PF00753 Metallo-beta-lactamase superfamily J9312_21175 PF09648 YycH protein J9312_21180 PF07435 YycH protein J9312_21185 PF00672 HAMP domain J9312_21185 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J9312_21185 PF00512 His Kinase A (phospho-acceptor) domain J9312_21185 PF13426 PAS domain J9312_21190 PF00486 Transcriptional regulatory protein, C terminal J9312_21190 PF00072 Response regulator receiver domain J9312_21215 PF00709 Adenylosuccinate synthetase J9312_21220 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily J9312_21225 PF00772 DnaB-like helicase N terminal domain J9312_21225 PF03796 DnaB-like helicase C terminal domain J9312_21230 PF09954 Uncharacterized protein conserved in bacteria (DUF2188) J9312_21240 PF14174 YycC-like protein J9312_21245 PF07690 Major Facilitator Superfamily J9312_21250 PF13231 Dolichyl-phosphate-mannose-protein mannosyltransferase J9312_21255 PF01281 Ribosomal protein L9, N-terminal domain J9312_21255 PF03948 Ribosomal protein L9, C-terminal domain J9312_21260 PF02272 DHHA1 domain J9312_21260 PF01368 DHH family J9312_21280 PF01638 HxlR-like helix-turn-helix J9312_21285 PF01368 DHH family J9312_21285 PF02833 DHHA2 domain J9312_21300 PF07690 Major Facilitator Superfamily J9312_21305 PF06445 GyrI-like small molecule binding domain J9312_21305 PF13411 MerR HTH family regulatory protein J9312_21315 PF13474 SnoaL-like domain J9312_21320 PF00805 Pentapeptide repeats (8 copies) J9312_21335 PF01047 MarR family J9312_21340 PF13673 Acetyltransferase (GNAT) domain J9312_21350 PF00583 Acetyltransferase (GNAT) family J9312_21355 PF04237 YjbR J9312_21360 PF01872 RibD C-terminal domain J9312_21370 PF07690 Major Facilitator Superfamily J9312_21375 PF08050 Tetracycline resistance leader peptide J9312_21380 PF03190 Protein of unknown function, DUF255 J9312_21385 PF02517 CPBP intramembrane metalloprotease J9312_21390 PF00083 Sugar (and other) transporter J9312_21395 PF14602 Hexapeptide repeat of succinyl-transferase J9312_21395 PF12464 Maltose acetyltransferase J9312_21400 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily J9312_21405 PF00356 Bacterial regulatory proteins, lacI family J9312_21405 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family J9312_21410 PF03372 Endonuclease/Exonuclease/phosphatase family J9312_21415 PF01084 Ribosomal protein S18 J9312_21420 PF00436 Single-strand binding protein family J9312_21425 PF01250 Ribosomal protein S6 J9312_21430 PF06071 Protein of unknown function (DUF933) J9312_21430 PF01926 50S ribosome-binding GTPase J9312_21435 PF04879 Molybdopterin oxidoreductase Fe4S4 domain J9312_21435 PF00384 Molybdopterin oxidoreductase J9312_21435 PF01568 Molydopterin dinucleotide binding domain J9312_21440 PF06107 Bacterial protein of unknown function (DUF951) J9312_21450 PF06866 Protein of unknown function (DUF1256) J9312_21455 PF17762 HTH domain found in ParB protein J9312_21455 PF02195 ParB-like nuclease domain J9312_21460 PF13614 AAA domain J9312_21465 PF06713 Bacterial PH domain J9312_21470 PF02195 ParB-like nuclease domain J9312_21470 PF17762 HTH domain found in ParB protein J9312_21475 PF02527 rRNA small subunit methyltransferase G J9312_21480 PF01134 Glucose inhibited division protein A J9312_21480 PF13932 GidA associated domain J9312_21485 PF01926 50S ribosome-binding GTPase J9312_21485 PF12631 MnmE helical domain J9312_21485 PF10396 GTP-binding protein TrmE N-terminus J9312_21490 PF14804 Jag N-terminus J9312_21490 PF01424 R3H domain J9312_21495 PF02096 60Kd inner membrane protein J9312_21500 PF00825 Ribonuclease P J9312_21505 PF00468 Ribosomal protein L34