CD007_00005 PF00308 Bacterial dnaA protein CD007_00005 PF08299 Bacterial dnaA protein helix-turn-helix CD007_00005 PF11638 DnaA N-terminal domain CD007_00010 PF00712 DNA polymerase III beta subunit, N-terminal domain CD007_00010 PF02767 DNA polymerase III beta subunit, central domain CD007_00010 PF02768 DNA polymerase III beta subunit, C-terminal domain CD007_00015 PF13275 S4 domain CD007_00020 PF02463 RecF/RecN/SMC N terminal domain CD007_00025 PF04025 CD007_00025 CD007_00030 PF00204 DNA gyrase B CD007_00030 PF00986 DNA gyrase B subunit, carboxyl terminus CD007_00030 PF01751 Toprim domain CD007_00030 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CD007_00035 PF00521 DNA gyrase/topoisomerase IV, subunit A CD007_00035 PF03989 DNA gyrase C-terminal domain, beta-propeller CD007_00065 PF14175 CD007_00065 CD007_00070 PF00478 IMP dehydrogenase / GMP reductase domain CD007_00070 PF00571 CBS domain CD007_00075 PF00768 D-alanyl-D-alanine carboxypeptidase CD007_00075 PF07943 Penicillin-binding protein 5, C-terminal domain CD007_00080 PF01680 SOR/SNZ family CD007_00085 PF01174 SNO glutamine amidotransferase family CD007_00090 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CD007_00090 PF02403 Seryl-tRNA synthetase N-terminal domain CD007_00100 PF01712 Deoxynucleoside kinase CD007_00105 PF01712 Deoxynucleoside kinase CD007_00110 PF00704 Glycosyl hydrolases family 18 CD007_00110 PF01476 LysM domain CD007_00115 PF00857 Isochorismatase family CD007_00120 PF14437 CD007_00120 CD007_00130 PF12169 DNA polymerase III subunits gamma and tau domain III CD007_00130 PF13177 DNA polymerase III, delta subunit CD007_00135 PF02575 YbaB/EbfC DNA-binding family CD007_00140 PF02132 RecR protein CD007_00140 PF13662 Toprim domain CD007_00145 PF10704 CD007_00145 CD007_00150 PF07441 CD007_00150 CD007_00180 PF10764 CD007_00180 CD007_00185 PF10112 CD007_00185 CD007_00190 PF05816 CD007_00190 CD007_00195 PF01276 Orn/Lys/Arg decarboxylase, major domain CD007_00195 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain CD007_00200 PF02223 Thymidylate kinase CD007_00205 PF06153 Protein of unknown function (DUF970) CD007_00210 PF03885 Protein of unknown function (DUF327) CD007_00215 PF09115 DNA polymerase III, delta subunit, C terminal CD007_00215 PF13177 DNA polymerase III, delta subunit CD007_00220 PF04468 CD007_00220 CD007_00225 PF06156 CD007_00225 CD007_00230 PF05175 Methyltransferase small domain CD007_00235 PF01541 GIY-YIG catalytic domain CD007_00240 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CD007_00245 PF04014 Antidote-toxin recognition MazE CD007_00250 PF01588 Putative tRNA binding domain CD007_00250 PF08264 Anticodon-binding domain of tRNA CD007_00250 PF09334 tRNA synthetases class I (M) CD007_00255 PF01026 TatD related DNase CD007_00260 PF03990 CD007_00260 CD007_00260 PF06725 3D domain CD007_00260 PF07501 G5 domain CD007_00265 PF13331 CD007_00265 CD007_00265 PF13662 Toprim domain CD007_00270 PF00398 Ribosomal RNA adenine dimethylase CD007_00275 PF05582 CD007_00275 CD007_00280 PF06257 Protein of unknown function (DUF1021) CD007_00285 PF00269 Small, acid-soluble spore proteins, alpha/beta type CD007_00290 PF00288 GHMP kinases N terminal domain CD007_00290 PF08544 GHMP kinases C terminal CD007_00295 PF00156 Phosphoribosyl transferase domain CD007_00295 PF09182 Bacterial purine repressor, N-terminal CD007_00300 PF01042 Endoribonuclease L-PSP CD007_00305 PF04026 SpoVG CD007_00310 PF00132 Bacterial transferase hexapeptide (six repeats) CD007_00310 PF00483 Nucleotidyl transferase CD007_00315 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase CD007_00315 PF14572 Phosphoribosyl synthetase-associated domain CD007_00320 PF01386 Ribosomal L25p family CD007_00320 PF14693 Ribosomal protein TL5, C-terminal domain CD007_00325 PF01195 Peptidyl-tRNA hydrolase CD007_00330 PF10955 CD007_00330 CD007_00335 PF00270 DEAD/DEAH box helicase CD007_00335 PF00271 Helicase conserved C-terminal domain CD007_00335 PF02559 CarD-like/TRCF domain CD007_00335 PF03461 TRCF domain CD007_00340 PF04014 Antidote-toxin recognition MazE CD007_00340 PF15714 CD007_00340 CD007_00345 PF01943 CD007_00345 CD007_00345 PF14667 Polysaccharide biosynthesis C-terminal domain CD007_00350 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CD007_00350 PF03819 MazG nucleotide pyrophosphohydrolase domain CD007_00355 PF01479 S4 domain CD007_00360 PF07873 YabP family CD007_00365 PF09578 CD007_00365 CD007_00370 PF04977 Septum formation initiator CD007_00375 PF00575 S1 RNA binding domain CD007_00390 PF07228 Stage II sporulation protein E (SpoIIE) CD007_00395 PF00092 von Willebrand factor type A domain CD007_00400 PF00069 Protein kinase domain CD007_00405 PF01171 PP-loop family CD007_00405 PF09179 TilS substrate binding domain CD007_00405 PF11734 TilS substrate C-terminal domain CD007_00410 PF00156 Phosphoribosyl transferase domain CD007_00415 PF00004 ATPase family associated with various cellular activities (AAA) CD007_00415 PF01434 Peptidase family M41 CD007_00415 PF06480 FtsH Extracellular CD007_00420 PF03309 Type III pantothenate kinase CD007_00425 PF01430 Hsp33 protein CD007_00430 PF13145 PPIC-type PPIASE domain CD007_00435 PF00291 Pyridoxal-phosphate dependent enzyme CD007_00440 PF00425 chorismate binding enzyme CD007_00440 PF04715 Anthranilate synthase component I, N terminal region CD007_00445 PF00117 Glutamine amidotransferase class-I CD007_00450 PF01063 Aminotransferase class IV CD007_00455 PF00809 Pterin binding enzyme CD007_00460 PF02152 Dihydroneopterin aldolase CD007_00465 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) CD007_00470 PF01381 Helix-turn-helix CD007_00475 PF01207 Dihydrouridine synthase (Dus) CD007_00480 PF00152 tRNA synthetases class II (D, K and N) CD007_00480 PF01336 OB-fold nucleic acid binding domain CD007_00545 PF05848 Firmicute transcriptional repressor of class III stress genes (CtsR) CD007_00550 PF02151 UvrB/uvrC motif CD007_00555 PF00217 ATP:guanido phosphotransferase, C-terminal catalytic domain CD007_00560 PF00004 ATPase family associated with various cellular activities (AAA) CD007_00560 PF02151 UvrB/uvrC motif CD007_00560 PF02861 Clp amino terminal domain CD007_00560 PF07724 AAA domain (Cdc48 subfamily) CD007_00560 PF10431 C-terminal, D2-small domain, of ClpB protein CD007_00565 PF13481 AAA domain CD007_00565 PF13541 Subunit ChlI of Mg-chelatase CD007_00570 PF02457 DisA bacterial checkpoint controller nucleotide-binding CD007_00570 PF10635 DisA bacterial checkpoint controller linker region CD007_00580 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase CD007_00585 PF02542 YgbB family CD007_00590 PF00749 tRNA synthetases class I (E and Q), catalytic domain CD007_00600 PF00132 Bacterial transferase hexapeptide (six repeats) CD007_00600 PF06426 Serine acetyltransferase, N-terminal CD007_00605 PF01406 tRNA synthetases class I (C) catalytic domain CD007_00605 PF09190 DALR domain CD007_00610 PF00636 Ribonuclease III domain CD007_00615 PF00588 SpoU rRNA Methylase family CD007_00615 PF08032 RNA 2'-O ribose methyltransferase substrate binding CD007_00620 PF05991 CD007_00620 CD007_00625 PF04542 Sigma-70 region 2 CD007_00625 PF08281 Sigma-70, region 4 CD007_00630 PF00471 Ribosomal protein L33 CD007_00635 PF00584 SecE/Sec61-gamma subunits of protein translocation complex CD007_00640 PF00467 KOW motif CD007_00640 PF02357 Transcription termination factor nusG CD007_00645 PF00298 Ribosomal protein L11, RNA binding domain CD007_00645 PF03946 Ribosomal protein L11, N-terminal domain CD007_00650 PF00687 Ribosomal protein L1p/L10e family CD007_00655 PF00466 Ribosomal protein L10 CD007_00660 PF00542 Ribosomal protein L7/L12 C-terminal domain CD007_00660 PF16320 CD007_00660 CD007_00665 PF05175 Methyltransferase small domain CD007_00670 PF00562 RNA polymerase Rpb2, domain 6 CD007_00670 PF04560 RNA polymerase Rpb2, domain 7 CD007_00670 PF04561 RNA polymerase Rpb2, domain 2 CD007_00670 PF04563 RNA polymerase beta subunit CD007_00670 PF04565 RNA polymerase Rpb2, domain 3 CD007_00670 PF10385 RNA polymerase beta subunit external 1 domain CD007_00675 PF00623 RNA polymerase Rpb1, domain 2 CD007_00675 PF04983 RNA polymerase Rpb1, domain 3 CD007_00675 PF04997 RNA polymerase Rpb1, domain 1 CD007_00675 PF04998 RNA polymerase Rpb1, domain 5 CD007_00675 PF05000 RNA polymerase Rpb1, domain 4 CD007_00680 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family CD007_00685 PF00164 Ribosomal protein S12/S23 CD007_00690 PF00177 Ribosomal protein S7p/S5e CD007_00695 PF00009 Elongation factor Tu GTP binding domain CD007_00695 PF00679 Elongation factor G C-terminus CD007_00695 PF03144 Elongation factor Tu domain 2 CD007_00695 PF03764 Elongation factor G, domain IV CD007_00695 PF14492 Elongation Factor G, domain II CD007_00700 PF00009 Elongation factor Tu GTP binding domain CD007_00700 PF03143 Elongation factor Tu C-terminal domain CD007_00700 PF03144 Elongation factor Tu domain 2 CD007_00705 PF12146 Putative lysophospholipase CD007_00710 PF00338 Ribosomal protein S10p/S20e CD007_00715 PF00297 Ribosomal protein L3 CD007_00720 PF00573 Ribosomal protein L4/L1 family CD007_00725 PF00276 Ribosomal protein L23 CD007_00730 PF00181 Ribosomal Proteins L2, RNA binding domain CD007_00730 PF03947 Ribosomal Proteins L2, C-terminal domain CD007_00735 PF00203 Ribosomal protein S19 CD007_00740 PF00237 Ribosomal protein L22p/L17e CD007_00745 PF00189 Ribosomal protein S3, C-terminal domain CD007_00745 PF07650 KH domain CD007_00750 PF00252 Ribosomal protein L16p/L10e CD007_00755 PF00831 Ribosomal L29 protein CD007_00760 PF00366 Ribosomal protein S17 CD007_00765 PF00238 Ribosomal protein L14p/L23e CD007_00770 PF00467 KOW motif CD007_00770 PF17136 CD007_00770 CD007_00775 PF00281 Ribosomal protein L5 CD007_00775 PF00673 ribosomal L5P family C-terminus CD007_00780 PF00253 Ribosomal protein S14p/S29e CD007_00785 PF00410 Ribosomal protein S8 CD007_00790 PF00347 Ribosomal protein L6 CD007_00795 PF00861 Ribosomal L18p/L5e family CD007_00800 PF00333 Ribosomal protein S5, N-terminal domain CD007_00800 PF03719 Ribosomal protein S5, C-terminal domain CD007_00805 PF00327 Ribosomal protein L30p/L7e CD007_00810 PF00828 Ribosomal protein L18e/L15 CD007_00815 PF00344 SecY translocase CD007_00820 PF00406 Adenylate kinase CD007_00820 PF05191 Adenylate kinase, active site lid CD007_00825 PF00557 Metallopeptidase family M24 CD007_00835 PF01176 Translation initiation factor 1A / IF-1 CD007_00840 PF00444 Ribosomal protein L36 CD007_00845 PF00416 Ribosomal protein S13/S18 CD007_00850 PF00411 Ribosomal protein S11 CD007_00855 PF01000 RNA polymerase Rpb3/RpoA insert domain CD007_00855 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain CD007_00855 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain CD007_00860 PF01196 Ribosomal protein L17 CD007_00865 PF00005 ABC transporter CD007_00870 PF00005 ABC transporter CD007_00875 PF02361 Cobalt transport protein CD007_00880 PF01416 tRNA pseudouridine synthase CD007_00885 PF00572 Ribosomal protein L13 CD007_00890 PF00380 Ribosomal protein S9/S16 CD007_00895 PF08241 Methyltransferase domain CD007_00900 PF10730 CD007_00900 CD007_00905 PF01520 N-acetylmuramoyl-L-alanine amidase CD007_00910 PF10609 ParA/MinD ATPase like CD007_00920 PF14089 CD007_00920 CD007_00925 PF01522 Polysaccharide deacetylase CD007_01035 PF00916 CD007_01035 CD007_01035 PF01740 STAS domain CD007_01040 PF01758 Sodium Bile acid symporter family CD007_01045 PF00756 Putative esterase CD007_01050 PF01032 FecCD transport family CD007_01055 PF01032 FecCD transport family CD007_01060 PF01497 Periplasmic binding protein CD007_01065 PF01497 Periplasmic binding protein CD007_01065 PF12833 Helix-turn-helix domain CD007_01070 PF07075 Protein of unknown function (DUF1343) CD007_01075 PF00933 Glycosyl hydrolase family 3 N terminal domain CD007_01075 PF01915 Glycosyl hydrolase family 3 C-terminal domain CD007_01080 PF00144 Beta-lactamase CD007_01085 PF00367 phosphotransferase system, EIIB CD007_01085 PF02378 Phosphotransferase system, EIIC CD007_01090 PF01380 SIS domain CD007_01090 PF01418 Helix-turn-helix domain, rpiR family CD007_01095 PF01380 SIS domain CD007_01100 PF00583 Acetyltransferase (GNAT) family CD007_01105 PF04463 CD007_01105 CD007_01135 PF04542 Sigma-70 region 2 CD007_01135 PF08281 Sigma-70, region 4 CD007_01140 PF13490 Putative zinc-finger CD007_01145 PF02457 DisA bacterial checkpoint controller nucleotide-binding CD007_01150 PF07949 YbbR-like protein CD007_01155 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain CD007_01155 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I CD007_01155 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II CD007_01155 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III CD007_01160 PF01380 SIS domain CD007_01160 PF13522 Glutamine amidotransferase domain CD007_01165 PF00730 HhH-GPD superfamily base excision DNA repair protein CD007_01165 PF07934 8-oxoguanine DNA glycosylase, N-terminal domain CD007_01170 PF02805 Metal binding domain of Ada CD007_01170 PF12833 Helix-turn-helix domain CD007_01175 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain CD007_01175 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain CD007_01180 PF00361 NADH-Ubiquinone/plastoquinone (complex I), various chains CD007_01180 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus CD007_01185 PF10070 CD007_01185 CD007_01200 PF10057 CD007_01200 CD007_01205 PF12840 Helix-turn-helix domain CD007_01210 PF07690 Major Facilitator Superfamily CD007_01225 PF00069 Protein kinase domain CD007_01235 PF16226 CD007_01235 CD007_01240 PF00324 Amino acid permease CD007_01245 PF17334 CD007_01245 CD007_01250 PF17340 CD007_01250 CD007_01255 PF00905 Penicillin binding protein transpeptidase domain CD007_01260 PF00067 Cytochrome P450 CD007_01270 PF13520 Amino acid permease CD007_01275 PF03009 Glycerophosphoryl diester phosphodiesterase family CD007_01280 PF07690 Major Facilitator Superfamily CD007_01290 PF10852 CD007_01290 CD007_01295 PF00583 Acetyltransferase (GNAT) family CD007_01295 PF01047 MarR family CD007_01300 PF07690 Major Facilitator Superfamily CD007_01310 PF01471 Putative peptidoglycan binding domain CD007_01310 PF08924 Domain of unknown function (DUF1906) CD007_01315 PF00892 EamA-like transporter family CD007_01320 PF02311 AraC-like ligand binding domain CD007_01320 PF12833 Helix-turn-helix domain CD007_01325 PF03747 ADP-ribosylglycohydrolase CD007_01330 PF03496 ADP-ribosyltransferase exoenzyme CD007_01330 PF04740 CD007_01330 CD007_01335 PF02222 ATP-grasp domain CD007_01340 PF00089 Trypsin CD007_01345 PF10794 CD007_01345 CD007_01350 PF12697 Alpha/beta hydrolase family CD007_01355 PF01066 CDP-alcohol phosphatidyltransferase CD007_01360 PF09335 CD007_01360 CD007_01365 PF02666 CD007_01365 CD007_01375 PF05139 Erythromycin esterase CD007_01380 PF00581 Rhodanese-like domain CD007_01380 PF12368 CD007_01380 CD007_01385 PF00375 Sodium:dicarboxylate symporter family CD007_01390 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 CD007_01390 PF00367 phosphotransferase system, EIIB CD007_01390 PF02378 Phosphotransferase system, EIIC CD007_01395 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase CD007_01400 PF00392 Bacterial regulatory proteins, gntR family CD007_01400 PF07702 UTRA domain CD007_01410 PF01063 Aminotransferase class IV CD007_01415 PF00324 Amino acid permease CD007_01420 PF02574 Homocysteine S-methyltransferase CD007_01430 PF01235 CD007_01430 CD007_01435 PF04960 Glutaminase CD007_01440 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CD007_01445 PF00072 Response regulator receiver domain CD007_01445 PF08664 CD007_01445 CD007_01450 PF00701 Dihydrodipicolinate synthetase family CD007_01455 PF00171 Aldehyde dehydrogenase family CD007_01460 PF07690 Major Facilitator Superfamily CD007_01465 PF13378 Enolase C-terminal domain-like CD007_01470 PF00392 Bacterial regulatory proteins, gntR family CD007_01470 PF07729 FCD domain CD007_01475 PF04295 CD007_01475 CD007_01475 PF08666 SAF domain CD007_01480 PF01636 Phosphotransferase enzyme family CD007_01485 PF15777 CD007_01485 CD007_01490 PF00892 EamA-like transporter family CD007_01495 PF00072 Response regulator receiver domain CD007_01495 PF00486 Transcriptional regulatory protein, C terminal CD007_01500 PF00512 His Kinase A (phospho-acceptor) domain CD007_01500 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CD007_01505 PF00005 ABC transporter CD007_01510 PF12730 CD007_01510 CD007_01515 PF10710 CD007_01515 CD007_01520 PF07486 Cell Wall Hydrolase CD007_01525 PF10138 CD007_01525 CD007_01535 PF09423 PhoD-like phosphatase CD007_01535 PF16655 CD007_01535 CD007_01540 PF02416 mttA/Hcf106 family CD007_01545 PF00902 Sec-independent protein translocase protein (TatC) CD007_01550 PF01470 Pyroglutamyl peptidase CD007_01555 PF00266 Aminotransferase class-V CD007_01560 PF07690 Major Facilitator Superfamily CD007_01565 PF00440 Bacterial regulatory proteins, tetR family CD007_01570 PF00710 Asparaginase CD007_01575 PF01674 Lipase (class 2) CD007_01580 PF06271 CD007_01580 CD007_01585 PF02810 SEC-C motif CD007_01585 PF05225 helix-turn-helix, Psq domain CD007_01590 PF14501 GHKL domain CD007_01595 PF00072 Response regulator receiver domain CD007_01595 PF04397 LytTr DNA-binding domain CD007_01600 PF00005 ABC transporter CD007_01605 PF12679 CD007_01605 CD007_01610 PF00248 Aldo/keto reductase family CD007_01615 PF11611 Domain of unknown function (DUF4352) CD007_01615 PF17118 CD007_01615 CD007_01620 PF16244 CD007_01620 CD007_01630 PF16244 CD007_01630 CD007_01635 PF13539 D-alanyl-D-alanine carboxypeptidase CD007_01645 PF13561 Enoyl-(Acyl carrier protein) reductase CD007_01650 PF00128 Alpha amylase, catalytic domain CD007_01650 PF16657 CD007_01650 CD007_01655 PF01297 Periplasmic solute binding protein family CD007_01660 PF00005 ABC transporter CD007_01665 PF00950 CD007_01665 CD007_01670 PF00296 Luciferase-like monooxygenase CD007_01675 PF02342 TerD domain CD007_01680 PF02342 TerD domain CD007_01685 PF02342 TerD domain CD007_01690 PF03741 CD007_01690 CD007_01695 PF14266 CD007_01695 CD007_01700 PF05816 CD007_01700 CD007_01705 PF07690 Major Facilitator Superfamily CD007_01715 PF07690 Major Facilitator Superfamily CD007_01720 PF12840 Helix-turn-helix domain CD007_01725 PF00005 ABC transporter CD007_01725 PF00571 CBS domain CD007_01730 PF00528 Binding-protein-dependent transport system inner membrane component CD007_01735 PF04069 Substrate binding domain of ABC-type glycine betaine transport system CD007_01740 PF01546 Peptidase family M20/M25/M40 CD007_01740 PF07687 Peptidase dimerisation domain CD007_01745 PF03606 CD007_01745 CD007_01755 PF00128 Alpha amylase, catalytic domain CD007_01755 PF16738 CD007_01755 CD007_01760 PF00056 lactate/malate dehydrogenase, NAD binding domain CD007_01760 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain CD007_01765 PF02652 CD007_01765 CD007_01770 PF07690 Major Facilitator Superfamily CD007_01775 PF01047 MarR family CD007_01780 PF01810 CD007_01780 CD007_01785 PF08892 CD007_01785 CD007_01790 PF00324 Amino acid permease CD007_01795 PF09347 Domain of unknown function (DUF1989) CD007_01800 PF02540 NAD synthase CD007_01805 PF13238 AAA domain CD007_01810 PF01202 Shikimate kinase CD007_01815 PF08241 Methyltransferase domain CD007_01820 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CD007_01820 PF03466 LysR substrate binding domain CD007_01825 PF05448 Acetyl xylan esterase (AXE1) CD007_01830 PF10127 CD007_01830 CD007_01835 PF01619 Proline dehydrogenase CD007_01840 PF00171 Aldehyde dehydrogenase family CD007_01845 PF00474 Sodium:solute symporter family CD007_01850 PF13556 PucR C-terminal helix-turn-helix domain CD007_01855 PF09323 CD007_01855 CD007_01860 PF03773 CD007_01860 CD007_01865 PF00561 alpha/beta hydrolase fold CD007_01870 PF07992 Pyridine nucleotide-disulphide oxidoreductase CD007_01875 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CD007_01880 PF00355 Rieske [2Fe-2S] domain CD007_01885 PF01077 Nitrite and sulphite reductase 4Fe-4S domain CD007_01885 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain CD007_01885 PF04324 BFD-like [2Fe-2S] binding domain CD007_01885 PF07992 Pyridine nucleotide-disulphide oxidoreductase CD007_01890 PF00384 Molybdopterin oxidoreductase CD007_01890 PF01568 Molydopterin dinucleotide binding domain CD007_01890 PF04879 Molybdopterin oxidoreductase Fe4S4 domain CD007_01895 PF01077 Nitrite and sulphite reductase 4Fe-4S domain CD007_01895 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain CD007_01895 PF04324 BFD-like [2Fe-2S] binding domain CD007_01895 PF07992 Pyridine nucleotide-disulphide oxidoreductase CD007_01900 PF07690 Major Facilitator Superfamily CD007_01905 PF02649 Type I GTP cyclohydrolase folE2 CD007_01910 PF03734 L,D-transpeptidase catalytic domain CD007_01920 PF02492 CobW/HypB/UreG, nucleotide-binding domain CD007_01920 PF07683 Cobalamin synthesis protein cobW C-terminal domain CD007_01925 PF00528 Binding-protein-dependent transport system inner membrane component CD007_01930 PF00497 Bacterial extracellular solute-binding proteins, family 3 CD007_01940 PF06271 CD007_01940 CD007_01945 PF10925 CD007_01945 CD007_01950 PF00232 Glycosyl hydrolase family 1 CD007_01955 PF11033 Competence protein J (ComJ) CD007_01960 PF14040 CD007_01960 CD007_01965 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CD007_01965 PF17202 CD007_01965 CD007_01970 PF01380 SIS domain CD007_01975 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family CD007_01980 PF01638 HxlR-like helix-turn-helix CD007_01985 PF00501 AMP-binding enzyme CD007_01985 PF00550 Phosphopantetheine attachment site CD007_01985 PF00668 Condensation domain CD007_01985 PF13193 AMP-binding enzyme C-terminal domain CD007_01990 PF00501 AMP-binding enzyme CD007_01990 PF00550 Phosphopantetheine attachment site CD007_01990 PF00668 Condensation domain CD007_01990 PF13193 AMP-binding enzyme C-terminal domain CD007_01995 PF00501 AMP-binding enzyme CD007_01995 PF00550 Phosphopantetheine attachment site CD007_01995 PF00668 Condensation domain CD007_01995 PF00975 Thioesterase domain CD007_01995 PF13193 AMP-binding enzyme C-terminal domain CD007_02000 PF00975 Thioesterase domain CD007_02005 PF07690 Major Facilitator Superfamily CD007_02010 PF14317 CD007_02010 CD007_02015 PF00892 EamA-like transporter family CD007_02020 PF00155 Aminotransferase class I and II CD007_02020 PF00392 Bacterial regulatory proteins, gntR family CD007_02025 PF01648 4'-phosphopantetheinyl transferase superfamily CD007_02035 PF00005 ABC transporter CD007_02040 PF00528 Binding-protein-dependent transport system inner membrane component CD007_02045 PF00497 Bacterial extracellular solute-binding proteins, family 3 CD007_02050 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CD007_02050 PF03466 LysR substrate binding domain CD007_02055 PF02441 Flavoprotein CD007_02060 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase CD007_02075 PF00561 alpha/beta hydrolase fold CD007_02080 PF00854 POT family CD007_02085 PF12708 Pectate lyase superfamily protein CD007_02085 PF13229 Right handed beta helix region CD007_02095 PF03323 CD007_02095 CD007_02100 PF05504 Spore germination B3/ GerAC like, C-terminal CD007_02105 PF03845 CD007_02105 CD007_02110 PF00005 ABC transporter CD007_02115 PF02687 CD007_02115 CD007_02115 PF12704 MacB-like periplasmic core domain CD007_02120 PF00072 Response regulator receiver domain CD007_02120 PF00486 Transcriptional regulatory protein, C terminal CD007_02125 PF00512 His Kinase A (phospho-acceptor) domain CD007_02125 PF00672 HAMP domain CD007_02125 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CD007_02130 PF13424 Tetratricopeptide repeat CD007_02135 PF11131 CD007_02135 CD007_02140 PF09680 CD007_02140 CD007_02145 PF09680 CD007_02145 CD007_02150 PF00696 Amino acid kinase family CD007_02150 PF13840 ACT domain CD007_02155 PF01032 FecCD transport family CD007_02160 PF01032 FecCD transport family CD007_02165 PF00005 ABC transporter CD007_02170 PF01497 Periplasmic binding protein CD007_02175 PF07690 Major Facilitator Superfamily CD007_02180 PF00440 Bacterial regulatory proteins, tetR family CD007_02185 PF00881 Nitroreductase family CD007_02190 PF03992 Antibiotic biosynthesis monooxygenase CD007_02195 PF01022 Bacterial regulatory protein, arsR family CD007_02200 PF00155 Aminotransferase class I and II CD007_02200 PF00392 Bacterial regulatory proteins, gntR family CD007_02205 PF00202 Aminotransferase class-III CD007_02210 PF00171 Aldehyde dehydrogenase family CD007_02215 PF06800 CD007_02215 CD007_02220 PF13561 Enoyl-(Acyl carrier protein) reductase CD007_02225 PF07987 Domain of unkown function (DUF1775) CD007_02230 PF04234 CopC domain CD007_02230 PF05425 CD007_02230 CD007_02235 PF08220 DeoR-like helix-turn-helix domain CD007_02245 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CD007_02245 PF02378 Phosphotransferase system, EIIC CD007_02250 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CD007_02255 PF01232 Mannitol dehydrogenase Rossmann domain CD007_02255 PF08125 Mannitol dehydrogenase C-terminal domain CD007_02260 PF00180 Isocitrate/isopropylmalate dehydrogenase CD007_02265 PF00717 Peptidase S24-like CD007_02270 PF01738 Dienelactone hydrolase family CD007_02275 PF07977 FabA-like domain CD007_02285 PF08282 haloacid dehalogenase-like hydrolase CD007_02290 PF03746 LamB/YcsF family CD007_02295 PF01566 CD007_02295 CD007_02300 PF07286 Protein of unknown function (DUF1445) CD007_02305 PF02682 Allophanate hydrolase subunit 1 CD007_02310 PF02626 Allophanate hydrolase subunit 2 CD007_02315 PF01614 Bacterial transcriptional regulator CD007_02315 PF09339 IclR helix-turn-helix domain CD007_02320 PF13472 GDSL-like Lipase/Acylhydrolase family CD007_02325 PF13129 CD007_02325 CD007_02330 PF03992 Antibiotic biosynthesis monooxygenase CD007_02335 PF00905 Penicillin binding protein transpeptidase domain CD007_02335 PF03717 Penicillin-binding Protein dimerisation domain CD007_02335 PF05223 NTF2-like N-terminal transpeptidase domain CD007_02340 PF00248 Aldo/keto reductase family CD007_02345 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CD007_02345 PF00874 PRD domain CD007_02345 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CD007_02345 PF05043 Mga helix-turn-helix domain CD007_02345 PF08279 HTH domain CD007_02350 PF00501 AMP-binding enzyme CD007_02350 PF13193 AMP-binding enzyme C-terminal domain CD007_02355 PF13649 Methyltransferase domain CD007_02360 PF13561 Enoyl-(Acyl carrier protein) reductase CD007_02370 PF13302 Acetyltransferase (GNAT) domain CD007_02375 PF16242 CD007_02375 CD007_02380 PF10997 CD007_02380 CD007_02385 PF12823 CD007_02385 CD007_02390 PF01037 AsnC family CD007_02390 PF13412 Winged helix-turn-helix DNA-binding CD007_02395 PF01131 DNA topoisomerase CD007_02395 PF01751 Toprim domain CD007_02405 PF00990 GGDEF domain CD007_02410 PF10096 CD007_02410 CD007_02415 PF13641 Glycosyltransferase like family 2 CD007_02420 PF03170 Bacterial cellulose synthase subunit CD007_02425 PF13520 Amino acid permease CD007_02430 PF00293 NUDIX domain CD007_02435 PF00205 Thiamine pyrophosphate enzyme, central domain CD007_02435 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CD007_02435 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CD007_02445 PF01566 CD007_02445 CD007_02450 PF04226 CD007_02450 CD007_02455 PF09954 CD007_02455 CD007_02460 PF12787 CD007_02460 CD007_02465 PF10685 CD007_02465 CD007_02470 PF07883 Cupin domain CD007_02475 PF16291 CD007_02475 CD007_02480 PF05067 Manganese containing catalase CD007_02485 PF03480 Bacterial extracellular solute-binding protein, family 7 CD007_02490 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CD007_02490 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain CD007_02490 PF17203 CD007_02490 CD007_02495 PF00072 Response regulator receiver domain CD007_02495 PF08220 DeoR-like helix-turn-helix domain CD007_02500 PF00375 Sodium:dicarboxylate symporter family CD007_02505 PF01594 CD007_02505 CD007_02510 PF00005 ABC transporter CD007_02515 PF12730 CD007_02515 CD007_02525 PF02770 Acyl-CoA dehydrogenase, middle domain CD007_02525 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CD007_02525 PF08028 Acyl-CoA dehydrogenase, C-terminal domain CD007_02530 PF13040 CD007_02530 CD007_02535 PF13076 CD007_02535 CD007_02540 PF01545 Cation efflux family CD007_02540 PF16916 CD007_02540 CD007_02545 PF00085 Thioredoxin CD007_02550 PF01820 D-ala D-ala ligase N-terminus CD007_02550 PF07478 D-ala D-ala ligase C-terminus CD007_02555 PF01225 Mur ligase family, catalytic domain CD007_02555 PF02875 Mur ligase family, glutamate ligase domain CD007_02555 PF08245 Mur ligase middle domain CD007_02565 PF00270 DEAD/DEAH box helicase CD007_02565 PF00271 Helicase conserved C-terminal domain CD007_02570 PF03703 CD007_02570 CD007_02575 PF03703 CD007_02575 CD007_02580 PF01694 Rhomboid family CD007_02585 PF01648 4'-phosphopantetheinyl transferase superfamily CD007_02595 PF00842 Alanine racemase, C-terminal domain CD007_02595 PF01168 Alanine racemase, N-terminal domain CD007_02600 PF01402 Ribbon-helix-helix protein, copG family CD007_02605 PF02452 PemK-like protein CD007_02610 PF01740 STAS domain CD007_02610 PF08678 Rsbr N terminal CD007_02615 PF01740 STAS domain CD007_02620 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CD007_02625 PF07228 Stage II sporulation protein E (SpoIIE) CD007_02625 PF08673 Phosphoserine phosphatase RsbU, N-terminal domain CD007_02630 PF01740 STAS domain CD007_02635 PF13581 Histidine kinase-like ATPase domain CD007_02640 PF04539 Sigma-70 region 3 CD007_02640 PF04542 Sigma-70 region 2 CD007_02640 PF04545 Sigma-70, region 4 CD007_02645 PF07228 Stage II sporulation protein E (SpoIIE) CD007_02650 PF00575 S1 RNA binding domain CD007_02650 PF09371 Tex-like protein N-terminal domain CD007_02650 PF12836 Helix-hairpin-helix motif CD007_02650 PF16921 CD007_02650 CD007_02660 PF10263 CD007_02660 CD007_02660 PF17283 CD007_02660 CD007_02700 PF00589 Phage integrase family CD007_02700 PF14659 Phage integrase, N-terminal SAM-like domain CD007_02710 PF00270 DEAD/DEAH box helicase CD007_02710 PF13307 Helicase C-terminal domain CD007_02730 PF14280 CD007_02730 CD007_02735 PF14567 SMI1-KNR4 cell-wall CD007_02745 PF04740 CD007_02745 CD007_02750 PF01844 HNH endonuclease CD007_02750 PF11907 CD007_02750 CD007_02755 PF01381 Helix-turn-helix CD007_02765 PF00487 CD007_02765 CD007_02770 PF00313 'Cold-shock' DNA-binding domain CD007_02775 PF02559 CarD-like/TRCF domain CD007_02785 PF00892 EamA-like transporter family CD007_02790 PF02311 AraC-like ligand binding domain CD007_02790 PF12833 Helix-turn-helix domain CD007_02795 PF00892 EamA-like transporter family CD007_02800 PF06445 GyrI-like small molecule binding domain CD007_02800 PF12833 Helix-turn-helix domain CD007_02805 PF00155 Aminotransferase class I and II CD007_02805 PF00392 Bacterial regulatory proteins, gntR family CD007_02810 PF07690 Major Facilitator Superfamily CD007_02820 PF08818 Domain of unknown function (DU1801) CD007_02820 PF13376 CD007_02820 CD007_02835 PF00381 PTS HPr component phosphorylation site CD007_02840 PF00440 Bacterial regulatory proteins, tetR family CD007_02840 PF14278 CD007_02840 CD007_02845 PF00892 EamA-like transporter family CD007_02850 PF00155 Aminotransferase class I and II CD007_02850 PF00392 Bacterial regulatory proteins, gntR family CD007_02855 PF01575 MaoC like domain CD007_02860 PF06821 Serine hydrolase CD007_02865 PF01638 HxlR-like helix-turn-helix CD007_02870 PF02588 CD007_02870 CD007_02870 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) CD007_02875 PF01638 HxlR-like helix-turn-helix CD007_02880 PF02525 Flavodoxin-like fold CD007_02885 PF07690 Major Facilitator Superfamily CD007_02890 PF00440 Bacterial regulatory proteins, tetR family CD007_02890 PF16859 CD007_02890 CD007_02895 PF01022 Bacterial regulatory protein, arsR family CD007_02900 PF02040 CD007_02900 CD007_02910 PF12746 GNAT acetyltransferase CD007_02915 PF00892 EamA-like transporter family CD007_02920 PF00155 Aminotransferase class I and II CD007_02920 PF00392 Bacterial regulatory proteins, gntR family CD007_02925 PF01613 Flavin reductase like domain CD007_02930 PF12840 Helix-turn-helix domain CD007_02935 PF02627 Carboxymuconolactone decarboxylase family CD007_02950 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CD007_02950 PF07730 Histidine kinase CD007_02955 PF00072 Response regulator receiver domain CD007_02955 PF00196 Bacterial regulatory proteins, luxR family CD007_02960 PF03176 MMPL family CD007_02965 PF12697 Alpha/beta hydrolase family CD007_02970 PF04474 CD007_02970 CD007_02975 PF06445 GyrI-like small molecule binding domain CD007_02975 PF13411 MerR HTH family regulatory protein CD007_02980 PF01545 Cation efflux family CD007_02980 PF16916 CD007_02980 CD007_02985 PF00881 Nitroreductase family CD007_02990 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CD007_02995 PF07681 CD007_02995 CD007_03000 PF00085 Thioredoxin CD007_03010 PF10676 CD007_03010 CD007_03015 PF10676 CD007_03015 CD007_03020 PF04239 Protein of unknown function (DUF421) CD007_03025 PF04239 Protein of unknown function (DUF421) CD007_03030 PF00011 Hsp20/alpha crystallin family CD007_03035 PF10676 CD007_03035 CD007_03040 PF10676 CD007_03040 CD007_03045 PF00440 Bacterial regulatory proteins, tetR family CD007_03050 PF13564 CD007_03050 CD007_03055 PF00583 Acetyltransferase (GNAT) family CD007_03060 PF00005 ABC transporter CD007_03060 PF12848 ABC transporter CD007_03065 PF00324 Amino acid permease CD007_03070 PF05163 DinB family CD007_03075 PF01047 MarR family CD007_03080 PF03176 MMPL family CD007_03085 PF00881 Nitroreductase family CD007_03090 PF01047 MarR family CD007_03095 PF07690 Major Facilitator Superfamily CD007_03100 PF01925 CD007_03100 CD007_03105 PF00392 Bacterial regulatory proteins, gntR family CD007_03105 PF07729 FCD domain CD007_03110 PF00704 Glycosyl hydrolases family 18 CD007_03110 PF01476 LysM domain CD007_03115 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase CD007_03120 PF11611 Domain of unknown function (DUF4352) CD007_03125 PF00245 Alkaline phosphatase CD007_03130 PF08818 Domain of unknown function (DU1801) CD007_03135 PF16302 CD007_03135 CD007_03140 PF00583 Acetyltransferase (GNAT) family CD007_03145 PF01966 HD domain CD007_03150 PF07563 Protein of unknown function (DUF1541) CD007_03155 PF07690 Major Facilitator Superfamily CD007_03160 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CD007_03165 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit CD007_03170 PF02378 Phosphotransferase system, EIIC CD007_03175 PF00232 Glycosyl hydrolase family 1 CD007_03180 PF00392 Bacterial regulatory proteins, gntR family CD007_03180 PF07702 UTRA domain CD007_03185 PF00480 ROK family CD007_03190 PF01238 Phosphomannose isomerase type I CD007_03195 PF02156 Glycosyl hydrolase family 26 CD007_03200 PF05067 Manganese containing catalase CD007_03240 PF00586 AIR synthase related protein, N-terminal domain CD007_03240 PF02769 AIR synthase related protein, C-terminal domain CD007_03245 PF02367 Uncharacterised P-loop hydrolase UPF0079 CD007_03250 PF00814 Glycoprotease family CD007_03255 PF00583 Acetyltransferase (GNAT) family CD007_03260 PF00814 Glycoprotease family CD007_03265 PF00005 ABC transporter CD007_03265 PF12848 ABC transporter CD007_03265 PF16326 CD007_03265 CD007_03270 PF01967 MoaC family CD007_03275 PF02629 CoA binding domain CD007_03275 PF06971 Putative DNA-binding protein N-terminus CD007_03280 PF02416 mttA/Hcf106 family CD007_03285 PF00902 Sec-independent protein translocase protein (TatC) CD007_03295 PF14146 CD007_03295 CD007_03300 PF02517 CAAX protease self-immunity CD007_03305 PF00166 Chaperonin 10 Kd subunit CD007_03310 PF00118 TCP-1/cpn60 chaperonin family CD007_03330 PF00107 Zinc-binding dehydrogenase CD007_03330 PF08240 Alcohol dehydrogenase GroES-like domain CD007_03335 PF13347 MFS/sugar transport protein CD007_03340 PF00294 pfkB family carbohydrate kinase CD007_03345 PF04012 CD007_03345 CD007_03350 PF08271 TFIIB zinc-binding CD007_03355 PF04536 TLP18 CD007_03360 PF13248 CD007_03360 CD007_03360 PF13421 CD007_03360 CD007_03365 PF07885 Ion channel CD007_03370 PF00083 Sugar (and other) transporter CD007_03375 PF00107 Zinc-binding dehydrogenase CD007_03375 PF08240 Alcohol dehydrogenase GroES-like domain CD007_03380 PF03330 Rare lipoprotein A (RlpA)-like double-psi beta-barrel CD007_03385 PF07676 WD40-like Beta Propeller Repeat CD007_03395 PF14169 CD007_03395 CD007_03400 PF12697 Alpha/beta hydrolase family CD007_03405 PF13170 CD007_03405 CD007_03410 PF00394 Multicopper oxidase CD007_03410 PF07731 Multicopper oxidase CD007_03410 PF07732 Multicopper oxidase CD007_03415 PF00324 Amino acid permease CD007_03425 PF01545 Cation efflux family CD007_03425 PF16916 CD007_03425 CD007_03430 PF07726 ATPase family associated with various cellular activities (AAA) CD007_03435 PF01882 CD007_03435 CD007_03440 PF01841 Transglutaminase-like superfamily CD007_03440 PF13559 CD007_03440 CD007_03445 PF00117 Glutamine amidotransferase class-I CD007_03445 PF00958 GMP synthase C terminal domain CD007_03445 PF02540 NAD synthase CD007_03450 PF04542 Sigma-70 region 2 CD007_03450 PF08281 Sigma-70, region 4 CD007_03455 PF13786 Domain of unknown function (DUF4179) CD007_03460 PF00860 Permease family CD007_03470 PF13076 CD007_03470 CD007_03475 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) CD007_03480 PF14044 CD007_03480 CD007_03485 PF00731 AIR carboxylase CD007_03490 PF02222 ATP-grasp domain CD007_03490 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase CD007_03495 PF00206 Lyase CD007_03495 PF10397 Adenylosuccinate lyase C-terminus CD007_03500 PF01259 SAICAR synthetase CD007_03505 PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase CD007_03510 PF13507 CobB/CobQ-like glutamine amidotransferase domain CD007_03515 PF00586 AIR synthase related protein, N-terminal domain CD007_03515 PF02769 AIR synthase related protein, C-terminal domain CD007_03520 PF00156 Phosphoribosyl transferase domain CD007_03520 PF13522 Glutamine amidotransferase domain CD007_03525 PF00586 AIR synthase related protein, N-terminal domain CD007_03525 PF02769 AIR synthase related protein, C-terminal domain CD007_03530 PF00551 Formyl transferase CD007_03535 PF01808 AICARFT/IMPCHase bienzyme CD007_03535 PF02142 MGS-like domain CD007_03540 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain CD007_03540 PF02843 Phosphoribosylglycinamide synthetase, C domain CD007_03540 PF02844 Phosphoribosylglycinamide synthetase, N domain CD007_03545 PF01037 AsnC family CD007_03545 PF13412 Winged helix-turn-helix DNA-binding CD007_03550 PF13520 Amino acid permease CD007_03555 PF11127 Protein of unknown function (DUF2892) CD007_03560 PF01979 Amidohydrolase family CD007_03560 PF13382 Adenine deaminase C-terminal domain CD007_03565 PF11258 Protein of unknown function (DUF3048) CD007_03565 PF17479 CD007_03565 CD007_03570 PF01371 Trp repressor protein CD007_03575 PF01645 Conserved region in glutamate synthase CD007_03580 PF01884 PcrB family CD007_03585 PF00580 UvrD/REP helicase N-terminal domain CD007_03585 PF13361 UvrD-like helicase C-terminal domain CD007_03590 PF00533 BRCA1 C Terminus (BRCT) domain CD007_03590 PF01653 NAD-dependent DNA ligase adenylation domain CD007_03590 PF03119 NAD-dependent DNA ligase C4 zinc finger domain CD007_03590 PF03120 NAD-dependent DNA ligase OB-fold domain CD007_03590 PF12826 Helix-hairpin-helix motif CD007_03590 PF14520 Helix-hairpin-helix domain CD007_03595 PF07537 CamS sex pheromone cAM373 precursor CD007_03600 PF01636 Phosphotransferase enzyme family CD007_03605 PF02308 CD007_03605 CD007_03610 PF00474 Sodium:solute symporter family CD007_03615 PF02686 Glu-tRNAGln amidotransferase C subunit CD007_03620 PF01425 Amidase CD007_03625 PF02637 GatB domain CD007_03625 PF02934 GatB/GatE catalytic domain CD007_03635 PF00873 AcrB/AcrD/AcrF family CD007_03640 PF00781 Diacylglycerol kinase catalytic domain CD007_03645 PF01938 TRAM domain CD007_03645 PF05958 tRNA (Uracil-5-)-methyltransferase CD007_03655 PF04634 Protein of unknown function, DUF600 CD007_03660 PF04740 CD007_03660 CD007_03660 PF13930 DNA/RNA non-specific endonuclease CD007_03670 PF13176 Tetratricopeptide repeat CD007_03680 PF01709 Transcriptional regulator CD007_03690 PF00440 Bacterial regulatory proteins, tetR family CD007_03695 PF12680 SnoaL-like domain CD007_03705 PF11007 CD007_03705 CD007_03710 PF12652 CD007_03710 CD007_03715 PF05067 Manganese containing catalase CD007_03720 PF00583 Acetyltransferase (GNAT) family CD007_03725 PF14150 CD007_03725 CD007_03730 PF04854 CD007_03730 CD007_03735 PF00672 HAMP domain CD007_03735 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CD007_03735 PF02743 Cache domain CD007_03735 PF06580 CD007_03735 CD007_03740 PF00072 Response regulator receiver domain CD007_03740 PF12833 Helix-turn-helix domain CD007_03745 PF13416 Bacterial extracellular solute-binding protein CD007_03750 PF00528 Binding-protein-dependent transport system inner membrane component CD007_03755 PF00528 Binding-protein-dependent transport system inner membrane component CD007_03760 PF07470 Glycosyl Hydrolase Family 88 CD007_03765 PF12833 Helix-turn-helix domain CD007_03770 PF13472 GDSL-like Lipase/Acylhydrolase family CD007_03775 PF09224 Domain of unknown function (DUF1961) CD007_03780 PF04854 CD007_03780 CD007_03790 PF01839 FG-GAP repeat CD007_03795 PF13472 GDSL-like Lipase/Acylhydrolase family CD007_03800 PF02449 Beta-galactosidase CD007_03800 PF08532 Beta-galactosidase trimerisation domain CD007_03800 PF08533 Beta-galactosidase C-terminal domain CD007_03810 PF01547 Bacterial extracellular solute-binding protein CD007_03815 PF00528 Binding-protein-dependent transport system inner membrane component CD007_03820 PF00528 Binding-protein-dependent transport system inner membrane component CD007_03825 PF02056 Family 4 glycosyl hydrolase CD007_03825 PF11975 Family 4 glycosyl hydrolase C-terminal domain CD007_03830 PF04239 Protein of unknown function (DUF421) CD007_03835 PF03992 Antibiotic biosynthesis monooxygenase CD007_03840 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CD007_03850 PF01740 STAS domain CD007_03855 PF10055 CD007_03855 CD007_03860 PF01027 Inhibitor of apoptosis-promoting Bax1 CD007_03865 PF00892 EamA-like transporter family CD007_03870 PF01047 MarR family CD007_03875 PF01494 FAD binding domain CD007_03885 PF13037 CD007_03885 CD007_03885 PF13039 CD007_03885 CD007_03890 PF00067 Cytochrome P450 CD007_03890 PF00175 Oxidoreductase NAD-binding domain CD007_03890 PF00258 Flavodoxin CD007_03890 PF00667 FAD binding domain CD007_03895 PF00884 Sulfatase CD007_03900 PF00483 Nucleotidyl transferase CD007_03905 PF16363 CD007_03905 CD007_03910 PF03407 CD007_03910 CD007_03915 PF00535 Glycosyl transferase family 2 CD007_03920 PF03407 CD007_03920 CD007_03925 PF07690 Major Facilitator Superfamily CD007_03930 PF13419 Haloacid dehalogenase-like hydrolase CD007_03935 PF13520 Amino acid permease CD007_03940 PF00171 Aldehyde dehydrogenase family CD007_03945 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CD007_03950 PF00005 ABC transporter CD007_03950 PF12848 ABC transporter CD007_03950 PF16326 CD007_03950 CD007_03955 PF10787 CD007_03955 CD007_03960 PF13411 MerR HTH family regulatory protein CD007_03965 PF07690 Major Facilitator Superfamily CD007_03970 PF00082 Subtilase family CD007_03985 PF00005 ABC transporter CD007_03985 PF12848 ABC transporter CD007_03990 PF00270 DEAD/DEAH box helicase CD007_03990 PF00271 Helicase conserved C-terminal domain CD007_03995 PF00583 Acetyltransferase (GNAT) family CD007_04000 PF00107 Zinc-binding dehydrogenase CD007_04000 PF16884 CD007_04000 CD007_04005 PF00005 ABC transporter CD007_04010 PF01032 FecCD transport family CD007_04015 PF01032 FecCD transport family CD007_04020 PF01497 Periplasmic binding protein CD007_04025 PF11486 Protein of unknown function (DUF3212) CD007_04035 PF11181 CD007_04035 CD007_04040 PF00544 Pectate lyase CD007_04045 PF00939 Sodium:sulfate symporter transmembrane region CD007_04050 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CD007_04050 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain CD007_04055 PF00072 Response regulator receiver domain CD007_04055 PF08279 HTH domain CD007_04055 PF12431 CD007_04055 CD007_04060 PF03401 Tripartite tricarboxylate transporter family receptor CD007_04065 PF03600 Citrate transporter CD007_04070 PF00753 Metallo-beta-lactamase superfamily CD007_04075 PF02898 Nitric oxide synthase, oxygenase domain CD007_04080 PF00708 Acylphosphatase CD007_04085 PF03473 MOSC domain CD007_04085 PF03475 3-alpha domain CD007_04090 PF11121 CD007_04090 CD007_04100 PF11588 Protein of unknown function (DUF3243) CD007_04105 PF00557 Metallopeptidase family M24 CD007_04110 PF00367 phosphotransferase system, EIIB CD007_04110 PF02378 Phosphotransferase system, EIIC CD007_04115 PF00884 Sulfatase CD007_04125 PF09350 CD007_04125 CD007_04130 PF01235 CD007_04130 CD007_04135 PF03845 CD007_04135 CD007_04145 PF05504 Spore germination B3/ GerAC like, C-terminal CD007_04150 PF03323 CD007_04150 CD007_04155 PF00367 phosphotransferase system, EIIB CD007_04155 PF02378 Phosphotransferase system, EIIC CD007_04160 PF00128 Alpha amylase, catalytic domain CD007_04160 PF16657 CD007_04160 CD007_04165 PF00392 Bacterial regulatory proteins, gntR family CD007_04165 PF07702 UTRA domain CD007_04170 PF00881 Nitroreductase family CD007_04175 PF00149 Calcineurin-like phosphoesterase CD007_04175 PF02872 5'-nucleotidase, C-terminal domain CD007_04180 PF01965 DJ-1/PfpI family CD007_04185 PF07690 Major Facilitator Superfamily CD007_04190 PF06569 CD007_04190 CD007_04195 PF01451 Low molecular weight phosphotyrosine protein phosphatase CD007_04205 PF03631 CD007_04205 CD007_04210 PF07690 Major Facilitator Superfamily CD007_04215 PF01699 Sodium/calcium exchanger protein CD007_04220 PF14167 CD007_04220 CD007_04225 PF00924 Mechanosensitive ion channel CD007_04230 PF04055 Radical SAM superfamily CD007_04230 PF08756 CD007_04230 CD007_04230 PF13353 4Fe-4S single cluster domain CD007_04240 PF01522 Polysaccharide deacetylase CD007_04245 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase CD007_04245 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase CD007_04250 PF01544 CorA-like Mg2+ transporter protein CD007_04255 PF00730 HhH-GPD superfamily base excision DNA repair protein CD007_04260 PF01938 TRAM domain CD007_04260 PF05958 tRNA (Uracil-5-)-methyltransferase CD007_04265 PF14118 CD007_04265 CD007_04270 PF01207 Dihydrouridine synthase (Dus) CD007_04280 PF00676 Dehydrogenase E1 component CD007_04285 PF02779 Transketolase, pyrimidine binding domain CD007_04285 PF02780 Transketolase, C-terminal domain CD007_04290 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) CD007_04290 PF00364 Biotin-requiring enzyme CD007_04290 PF02817 e3 binding domain CD007_04295 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CD007_04295 PF07992 Pyridine nucleotide-disulphide oxidoreductase CD007_04300 PF00158 Sigma-54 interaction domain CD007_04300 PF01590 GAF domain CD007_04300 PF02954 Bacterial regulatory protein, Fis family CD007_04305 PF08141 CD007_04305 CD007_04310 PF02694 CD007_04310 CD007_04315 PF17353 CD007_04315 CD007_04320 PF17353 CD007_04320 CD007_04335 PF06013 Proteins of 100 residues with WXG CD007_04340 PF02056 Family 4 glycosyl hydrolase CD007_04340 PF11975 Family 4 glycosyl hydrolase C-terminal domain CD007_04345 PF01380 SIS domain CD007_04345 PF01418 Helix-turn-helix domain, rpiR family CD007_04350 PF00367 phosphotransferase system, EIIB CD007_04350 PF02378 Phosphotransferase system, EIIC CD007_04355 PF11962 Peptidase_G2, IMC autoproteolytic cleavage domain CD007_04355 PF12708 Pectate lyase superfamily protein CD007_04360 PF00005 ABC transporter CD007_04360 PF00664 ABC transporter transmembrane region CD007_04365 PF00005 ABC transporter CD007_04365 PF00664 ABC transporter transmembrane region CD007_04370 PF07681 CD007_04370 CD007_04375 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CD007_04380 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CD007_04380 PF07730 Histidine kinase CD007_04385 PF00072 Response regulator receiver domain CD007_04385 PF00196 Bacterial regulatory proteins, luxR family CD007_04395 PF00005 ABC transporter CD007_04400 PF12698 ABC-2 family transporter protein CD007_04405 PF12698 ABC-2 family transporter protein CD007_04410 PF03551 Transcriptional regulator PadR-like family CD007_04410 PF10400 Virulence activator alpha C-term CD007_04415 PF01674 Lipase (class 2) CD007_04420 PF01757 CD007_04420 CD007_04425 PF12867 DinB superfamily CD007_04430 PF07690 Major Facilitator Superfamily CD007_04435 PF01047 MarR family CD007_04440 PF03706 CD007_04440 CD007_04440 PF09924 Uncharacterized conserved protein (DUF2156) CD007_04445 PF01497 Periplasmic binding protein CD007_04450 PF01032 FecCD transport family CD007_04455 PF01032 FecCD transport family CD007_04460 PF02567 Phenazine biosynthesis-like protein CD007_04465 PF00881 Nitroreductase family CD007_04470 PF14151 CD007_04470 CD007_04475 PF14152 CD007_04475 CD007_04480 PF01370 NAD dependent epimerase/dehydratase family CD007_04480 PF08338 Domain of unknown function (DUF1731) CD007_04485 PF02631 RecX family CD007_04490 PF08838 Protein of unknown function (DUF1811) CD007_04495 PF07690 Major Facilitator Superfamily CD007_04500 PF08176 CD007_04500 CD007_04505 PF14043 CD007_04505 CD007_04510 PF08239 Bacterial SH3 domain CD007_04515 PF13630 CD007_04515 CD007_04520 PF00561 alpha/beta hydrolase fold CD007_04525 PF00535 Glycosyl transferase family 2 CD007_04530 PF09586 CD007_04530 CD007_04535 PF04307 CD007_04535 CD007_04540 PF00730 HhH-GPD superfamily base excision DNA repair protein CD007_04540 PF14815 NUDIX domain CD007_04550 PF13561 Enoyl-(Acyl carrier protein) reductase CD007_04555 PF04259 CD007_04555 CD007_04560 PF14182 CD007_04560 CD007_04565 PF04167 Protein of unknown function (DUF402) CD007_04570 PF00005 ABC transporter CD007_04570 PF00664 ABC transporter transmembrane region CD007_04575 PF06081 CD007_04575 CD007_04580 PF00202 Aminotransferase class-III CD007_04585 PF00578 AhpC/TSA family CD007_04590 PF01475 Ferric uptake regulator family CD007_04595 PF11023 CD007_04595 CD007_04600 PF14540 Nucleotidyltransferase-like CD007_04700 PF07070 CD007_04700 CD007_04710 PF07875 CD007_04710 CD007_04720 PF01964 ThiC family CD007_04720 PF13667 ThiC-associated domain CD007_04725 PF08031 Berberine and berberine like CD007_04730 PF13040 CD007_04730 CD007_04735 PF00199 Catalase CD007_04735 PF06628 Catalase-related immune-responsive CD007_04740 PF00005 ABC transporter CD007_04745 PF09084 NMT1/THI5 like CD007_04750 PF00528 Binding-protein-dependent transport system inner membrane component CD007_04755 PF00296 Luciferase-like monooxygenase CD007_04765 PF00253 Ribosomal protein S14p/S29e CD007_04775 PF01381 Helix-turn-helix CD007_04790 PF08331 CD007_04790 CD007_04790 PF13484 CD007_04790 CD007_04790 PF13646 HEAT repeats CD007_04795 PF12671 CD007_04795 CD007_04800 PF00588 SpoU rRNA Methylase family CD007_04805 PF13171 CD007_04805 CD007_04810 PF04519 CD007_04810 CD007_04820 PF06798 CD007_04820 CD007_04820 PF08298 PrkA AAA domain CD007_04825 PF04285 CD007_04825 CD007_04830 PF01047 MarR family CD007_04835 PF13437 HlyD family secretion protein CD007_04840 PF07690 Major Facilitator Superfamily CD007_04845 PF03358 NADPH-dependent FMN reductase CD007_04865 PF00392 Bacterial regulatory proteins, gntR family CD007_04870 PF00005 ABC transporter CD007_04875 PF00005 ABC transporter CD007_04880 PF12679 CD007_04880 CD007_04885 PF00313 'Cold-shock' DNA-binding domain CD007_04895 PF03180 NLPA lipoprotein CD007_04900 PF00990 GGDEF domain CD007_04900 PF07694 5TMR of 5TMR-LYT CD007_04905 PF00375 Sodium:dicarboxylate symporter family CD007_04915 PF09580 CD007_04915 CD007_04925 PF07875 CD007_04925 CD007_04930 PF00149 Calcineurin-like phosphoesterase CD007_04930 PF00565 Staphylococcal nuclease homologue CD007_04930 PF02872 5'-nucleotidase, C-terminal domain CD007_04935 PF04203 Sortase family CD007_04940 PF00849 RNA pseudouridylate synthase CD007_04940 PF01479 S4 domain CD007_04945 PF17326 CD007_04945 CD007_04950 PF00571 CBS domain CD007_04955 PF13419 Haloacid dehalogenase-like hydrolase CD007_04960 PF00583 Acetyltransferase (GNAT) family CD007_04960 PF00795 Carbon-nitrogen hydrolase CD007_04965 PF00202 Aminotransferase class-III CD007_04970 PF04309 Glycerol-3-phosphate responsive antiterminator CD007_04975 PF00230 Major intrinsic protein CD007_04980 PF00370 FGGY family of carbohydrate kinases, N-terminal domain CD007_04980 PF02782 FGGY family of carbohydrate kinases, C-terminal domain CD007_04985 PF01266 FAD dependent oxidoreductase CD007_04985 PF16901 CD007_04985 CD007_04990 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain CD007_04990 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I CD007_04990 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II CD007_04990 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III CD007_04995 PF07730 Histidine kinase CD007_04995 PF13185 GAF domain CD007_05000 PF00072 Response regulator receiver domain CD007_05000 PF00196 Bacterial regulatory proteins, luxR family CD007_05005 PF03358 NADPH-dependent FMN reductase CD007_05010 PF14148 CD007_05010 CD007_05015 PF13028 Protein of unknown function (DUF3889) CD007_05020 PF00877 NlpC/P60 family CD007_05020 PF01476 LysM domain CD007_05025 PF02082 Transcriptional regulator CD007_05030 PF05552 Conserved TM helix CD007_05035 PF04293 CD007_05035 CD007_05040 PF00245 Alkaline phosphatase CD007_05045 PF00877 NlpC/P60 family CD007_05045 PF01476 LysM domain CD007_05050 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CD007_05050 PF03466 LysR substrate binding domain CD007_05055 PF00285 Citrate synthase CD007_05060 PF13561 Enoyl-(Acyl carrier protein) reductase CD007_05065 PF13520 Amino acid permease CD007_05070 PF00209 Sodium:neurotransmitter symporter family CD007_05075 PF00155 Aminotransferase class I and II CD007_05075 PF00392 Bacterial regulatory proteins, gntR family CD007_05080 PF00583 Acetyltransferase (GNAT) family CD007_05085 PF17453 CD007_05085 CD007_05090 PF13791 CD007_05090 CD007_05090 PF13800 CD007_05090 CD007_05095 PF04542 Sigma-70 region 2 CD007_05095 PF08281 Sigma-70, region 4 CD007_05100 PF00248 Aldo/keto reductase family CD007_05105 PF01553 Acyltransferase CD007_05110 PF00571 CBS domain CD007_05110 PF01595 CD007_05110 CD007_05110 PF03471 Transporter associated domain CD007_05115 PF13411 MerR HTH family regulatory protein CD007_05120 PF00155 Aminotransferase class I and II CD007_05125 PF00571 CBS domain CD007_05125 PF01595 CD007_05125 CD007_05125 PF03471 Transporter associated domain CD007_05130 PF02537 CD007_05130 CD007_05135 PF02537 CD007_05135 CD007_05140 PF03009 Glycerophosphoryl diester phosphodiesterase family CD007_05145 PF17444 CD007_05145 CD007_05150 PF00924 Mechanosensitive ion channel CD007_05155 PF02146 Sir2 family CD007_05160 PF01522 Polysaccharide deacetylase CD007_05165 PF01063 Aminotransferase class IV CD007_05170 PF03553 CD007_05170 CD007_05175 PF00582 Universal stress protein family CD007_05185 PF00005 ABC transporter CD007_05185 PF00664 ABC transporter transmembrane region CD007_05190 PF00005 ABC transporter CD007_05190 PF00664 ABC transporter transmembrane region CD007_05195 PF13460 NADH(P)-binding CD007_05205 PF00269 Small, acid-soluble spore proteins, alpha/beta type CD007_05210 PF17277 CD007_05210 CD007_05215 PF14398 CD007_05215 CD007_05220 PF14398 CD007_05220 CD007_05225 PF04286 CD007_05225 CD007_05230 PF06133 Protein of unknown function (DUF964) CD007_05235 PF08713 DNA alkylation repair enzyme CD007_05240 PF08282 haloacid dehalogenase-like hydrolase CD007_05245 PF04055 Radical SAM superfamily CD007_05250 PF00999 Sodium/hydrogen exchanger family CD007_05255 PF02080 TrkA-C domain CD007_05265 PF00378 Enoyl-CoA hydratase/isomerase family CD007_05270 PF14120 CD007_05270 CD007_05275 PF00005 ABC transporter CD007_05275 PF13732 CD007_05275 CD007_05280 PF12698 ABC-2 family transporter protein CD007_05285 PF00149 Calcineurin-like phosphoesterase CD007_05290 PF13514 AAA domain CD007_05295 PF01966 HD domain CD007_05300 PF14147 CD007_05300 CD007_05305 PF05698 Bacterial trigger factor protein (TF) C-terminus CD007_05305 PF13616 PPIC-type PPIASE domain CD007_05310 PF09680 CD007_05310 CD007_05315 PF09680 CD007_05315 CD007_05325 PF11667 CD007_05325 CD007_05330 PF08963 Protein of unknown function (DUF1878) CD007_05335 PF01047 MarR family CD007_05340 PF12732 CD007_05340 CD007_05350 PF17099 CD007_05350 CD007_05355 PF00266 Aminotransferase class-V CD007_05360 PF01230 HIT domain CD007_05365 PF00005 ABC transporter CD007_05370 PF05975 CD007_05370 CD007_05375 PF12787 CD007_05375 CD007_05380 PF01546 Peptidase family M20/M25/M40 CD007_05380 PF07687 Peptidase dimerisation domain CD007_05395 PF03992 Antibiotic biosynthesis monooxygenase CD007_05400 PF00905 Penicillin binding protein transpeptidase domain CD007_05400 PF00912 Transglycosylase CD007_05405 PF01208 Uroporphyrinogen decarboxylase (URO-D) CD007_05410 PF00762 Ferrochelatase CD007_05415 PF01593 Flavin containing amine oxidoreductase CD007_05420 PF00440 Bacterial regulatory proteins, tetR family CD007_05425 PF12698 ABC-2 family transporter protein CD007_05430 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal CD007_05430 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III CD007_05435 PF10086 CD007_05435 CD007_05445 PF05343 M42 glutamyl aminopeptidase CD007_05450 PF04266 ASCH domain CD007_05455 PF00375 Sodium:dicarboxylate symporter family CD007_05460 PF14149 CD007_05460 CD007_05465 PF12706 Beta-lactamase superfamily domain CD007_05470 PF03099 Biotin/lipoate A/B protein ligase family CD007_05470 PF10437 Bacterial lipoate protein ligase C-terminus CD007_05475 PF13460 NADH(P)-binding CD007_05480 PF00501 AMP-binding enzyme CD007_05480 PF13193 AMP-binding enzyme C-terminal domain CD007_05490 PF01435 Peptidase family M48 CD007_05490 PF16491 CD007_05490 CD007_05495 PF00082 Subtilase family CD007_05495 PF05922 Peptidase inhibitor I9 CD007_05500 PF00583 Acetyltransferase (GNAT) family CD007_05505 PF00107 Zinc-binding dehydrogenase CD007_05505 PF08240 Alcohol dehydrogenase GroES-like domain CD007_05510 PF01497 Periplasmic binding protein CD007_05515 PF00300 Histidine phosphatase superfamily (branch 1) CD007_05520 PF00108 Thiolase, N-terminal domain CD007_05520 PF02803 Thiolase, C-terminal domain CD007_05525 PF00501 AMP-binding enzyme CD007_05525 PF13193 AMP-binding enzyme C-terminal domain CD007_05530 PF02632 BioY family CD007_05535 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CD007_05535 PF11563 Protoglobin CD007_05540 PF00355 Rieske [2Fe-2S] domain CD007_05540 PF01266 FAD dependent oxidoreductase CD007_05545 PF13561 Enoyl-(Acyl carrier protein) reductase CD007_05550 PF08858 IDEAL domain CD007_05555 PF06338 CD007_05555 CD007_05560 PF13561 Enoyl-(Acyl carrier protein) reductase CD007_05565 PF05901 CD007_05565 CD007_05570 PF00474 Sodium:solute symporter family CD007_05575 PF11755 CD007_05575 CD007_05585 PF09335 CD007_05585 CD007_05590 PF00717 Peptidase S24-like CD007_05595 PF01494 FAD binding domain CD007_05600 PF01047 MarR family CD007_05615 PF07690 Major Facilitator Superfamily CD007_05620 PF01408 Oxidoreductase family, NAD-binding Rossmann fold CD007_05620 PF02894 Oxidoreductase family, C-terminal alpha/beta domain CD007_05625 PF05116 Sucrose-6F-phosphate phosphohydrolase CD007_05630 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family CD007_05635 PF00356 Bacterial regulatory proteins, lacI family CD007_05635 PF13377 Periplasmic binding protein-like domain CD007_05640 PF05145 CD007_05640 CD007_05645 PF07690 Major Facilitator Superfamily CD007_05650 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CD007_05650 PF12793 CD007_05650 CD007_05655 PF03860 Domain of Unknown Function (DUF326) CD007_05660 PF02915 Rubrerythrin CD007_05665 PF12705 PD-(D/E)XK nuclease superfamily CD007_05670 PF00580 UvrD/REP helicase N-terminal domain CD007_05670 PF12705 PD-(D/E)XK nuclease superfamily CD007_05670 PF13361 UvrD-like helicase C-terminal domain CD007_05675 PF00149 Calcineurin-like phosphoesterase CD007_05675 PF12320 Type 5 capsule protein repressor C-terminal domain CD007_05680 PF13476 AAA domain CD007_05680 PF13558 Putative exonuclease SbcCD, C subunit CD007_05690 PF10676 CD007_05690 CD007_05695 PF10970 CD007_05695 CD007_05705 PF10737 CD007_05705 CD007_05710 PF10803 CD007_05710 CD007_05715 PF10676 CD007_05715 CD007_05720 PF09388 Spo0E like sporulation regulatory protein CD007_05725 PF08757 CD007_05725 CD007_05730 PF01557 Fumarylacetoacetate (FAA) hydrolase family CD007_05735 PF07457 CD007_05735 CD007_05740 PF00082 Subtilase family CD007_05745 PF10949 CD007_05745 CD007_05750 PF00733 Asparagine synthase CD007_05750 PF13537 Glutamine amidotransferase domain CD007_05755 PF05163 DinB family CD007_05760 PF00494 Squalene/phytoene synthase CD007_05765 PF01554 MatE CD007_05770 PF02311 AraC-like ligand binding domain CD007_05770 PF12833 Helix-turn-helix domain CD007_05775 PF00356 Bacterial regulatory proteins, lacI family CD007_05775 PF13377 Periplasmic binding protein-like domain CD007_05780 PF01408 Oxidoreductase family, NAD-binding Rossmann fold CD007_05780 PF02894 Oxidoreductase family, C-terminal alpha/beta domain CD007_05785 PF05163 DinB family CD007_05790 PF01810 CD007_05790 CD007_05795 PF00155 Aminotransferase class I and II CD007_05795 PF00392 Bacterial regulatory proteins, gntR family CD007_05800 PF00805 Pentapeptide repeats (8 copies) CD007_05800 PF13599 Pentapeptide repeats (9 copies) CD007_05805 PF00561 alpha/beta hydrolase fold CD007_05805 PF08386 TAP-like protein CD007_05810 PF01583 Adenylylsulphate kinase CD007_05815 PF01747 ATP-sulfurylase CD007_05815 PF14306 PUA-like domain CD007_05820 PF01507 Phosphoadenosine phosphosulfate reductase family CD007_05825 PF04029 2-phosphosulpholactate phosphatase CD007_05830 PF02679 (2R)-phospho-3-sulfolactate synthase (ComA) CD007_05835 PF02588 CD007_05835 CD007_05840 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain CD007_05840 PF13378 Enolase C-terminal domain-like CD007_05845 PF07690 Major Facilitator Superfamily CD007_05850 PF13673 Acetyltransferase (GNAT) domain CD007_05855 PF13673 Acetyltransferase (GNAT) domain CD007_05860 PF02219 Methylenetetrahydrofolate reductase CD007_05860 PF02574 Homocysteine S-methyltransferase CD007_05865 PF04461 Protein of unknown function (DUF520) CD007_05870 PF13509 S1 domain CD007_05885 PF17418 CD007_05885 CD007_05890 PF03551 Transcriptional regulator PadR-like family CD007_05900 PF12650 CD007_05900 CD007_05905 PF01447 Thermolysin metallopeptidase, catalytic domain CD007_05905 PF02868 Thermolysin metallopeptidase, alpha-helical domain CD007_05905 PF03413 Peptidase propeptide and YPEB domain CD007_05905 PF07504 Fungalysin/Thermolysin Propeptide Motif CD007_05910 PF02645 Uncharacterised protein, DegV family COG1307 CD007_05915 PF02588 CD007_05915 CD007_05915 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) CD007_05920 PF12690 Intracellular proteinase inhibitor CD007_05925 PF12758 CD007_05925 CD007_05930 PF08282 haloacid dehalogenase-like hydrolase CD007_05935 PF00326 Prolyl oligopeptidase family CD007_05940 PF01883 Domain of unknown function DUF59 CD007_05945 PF01679 CD007_05945 CD007_05950 PF01565 FAD binding domain CD007_05955 PF07690 Major Facilitator Superfamily CD007_05960 PF01118 Semialdehyde dehydrogenase, NAD binding domain CD007_05960 PF02774 Semialdehyde dehydrogenase, dimerisation domain CD007_05965 PF01960 ArgJ family CD007_05970 PF00696 Amino acid kinase family CD007_05975 PF00202 Aminotransferase class-III CD007_05980 PF00117 Glutamine amidotransferase class-I CD007_05980 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain CD007_05985 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain CD007_05985 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain CD007_05990 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain CD007_05990 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain CD007_05995 PF14168 CD007_05995 CD007_06000 PF11151 CD007_06000 CD007_06015 PF02608 Basic membrane protein CD007_06020 PF10815 CD007_06020 CD007_06030 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal CD007_06030 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III CD007_06035 PF00109 Beta-ketoacyl synthase, N-terminal domain CD007_06035 PF02801 Beta-ketoacyl synthase, C-terminal domain CD007_06040 PF10026 CD007_06040 CD007_06045 PF00005 ABC transporter CD007_06045 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CD007_06050 PF00005 ABC transporter CD007_06050 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CD007_06055 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CD007_06060 PF00528 Binding-protein-dependent transport system inner membrane component CD007_06065 PF00528 Binding-protein-dependent transport system inner membrane component CD007_06065 PF12911 CD007_06065 CD007_06070 PF12227 CD007_06070 CD007_06075 PF00579 tRNA synthetases class I (W and Y) CD007_06080 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CD007_06085 PF00528 Binding-protein-dependent transport system inner membrane component CD007_06090 PF00528 Binding-protein-dependent transport system inner membrane component CD007_06090 PF12911 CD007_06090 CD007_06095 PF00005 ABC transporter CD007_06095 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CD007_06100 PF00005 ABC transporter CD007_06100 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CD007_06105 PF07690 Major Facilitator Superfamily CD007_06110 PF13508 Acetyltransferase (GNAT) domain CD007_06115 PF03960 ArsC family CD007_06120 PF03741 CD007_06120 CD007_06125 PF05389 Negative regulator of genetic competence (MecA) CD007_06130 PF06054 CD007_06130 CD007_06135 PF01432 Peptidase family M3 CD007_06135 PF08439 Oligopeptidase F CD007_06150 PF13743 Thioredoxin CD007_06155 PF01152 Bacterial-like globin CD007_06160 PF01464 Transglycosylase SLT domain CD007_06165 PF01928 CYTH domain CD007_06175 PF04607 Region found in RelA / SpoT proteins CD007_06180 PF01513 ATP-NAD kinase CD007_06185 PF00849 RNA pseudouridylate synthase CD007_06190 PF00149 Calcineurin-like phosphoesterase CD007_06195 PF00999 Sodium/hydrogen exchanger family CD007_06195 PF02080 TrkA-C domain CD007_06195 PF02254 TrkA-N domain CD007_06200 PF03070 TENA/THI-4/PQQC family CD007_06205 PF02581 Thiamine monophosphate synthase/TENI CD007_06210 PF01266 FAD dependent oxidoreductase CD007_06215 PF02597 ThiS family CD007_06220 PF05690 Thiazole biosynthesis protein ThiG CD007_06225 PF00899 ThiF family CD007_06230 PF08543 Phosphomethylpyrimidine kinase CD007_06235 PF13561 Enoyl-(Acyl carrier protein) reductase CD007_06240 PF14153 CD007_06240 CD007_06245 PF10612 CD007_06245 CD007_06250 PF10612 CD007_06250 CD007_06255 PF07552 CD007_06255 CD007_06265 PF07552 CD007_06265 CD007_06270 PF07098 CD007_06270 CD007_06280 PF09680 CD007_06280 CD007_06285 PF14069 CD007_06285 CD007_06290 PF00580 UvrD/REP helicase N-terminal domain CD007_06290 PF13361 UvrD-like helicase C-terminal domain CD007_06300 PF13673 Acetyltransferase (GNAT) domain CD007_06305 PF13563 2'-5' RNA ligase superfamily CD007_06310 PF00756 Putative esterase CD007_06315 PF01053 Cys/Met metabolism PLP-dependent enzyme CD007_06320 PF01053 Cys/Met metabolism PLP-dependent enzyme CD007_06325 PF13302 Acetyltransferase (GNAT) domain CD007_06330 PF05684 CD007_06330 CD007_06365 PF04740 CD007_06365 CD007_06370 PF01471 Putative peptidoglycan binding domain CD007_06390 PF03992 Antibiotic biosynthesis monooxygenase CD007_06395 PF13561 Enoyl-(Acyl carrier protein) reductase CD007_06400 PF02368 Bacterial Ig-like domain (group 2) CD007_06405 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CD007_06405 PF00874 PRD domain CD007_06405 PF05043 Mga helix-turn-helix domain CD007_06405 PF08279 HTH domain CD007_06410 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CD007_06410 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CD007_06410 PF02378 Phosphotransferase system, EIIC CD007_06415 PF01238 Phosphomannose isomerase type I CD007_06420 PF11208 CD007_06420 CD007_06425 PF13302 Acetyltransferase (GNAT) domain CD007_06435 PF04073 Aminoacyl-tRNA editing domain CD007_06440 PF13783 CD007_06440 CD007_06445 PF14154 CD007_06445 CD007_06455 PF01040 UbiA prenyltransferase family CD007_06465 PF01522 Polysaccharide deacetylase CD007_06465 PF11738 Protein of unknown function (DUF3298) CD007_06465 PF13739 Domain of unknown function (DUF4163) CD007_06470 PF10901 CD007_06470 CD007_06475 PF14070 CD007_06475 CD007_06485 PF10990 CD007_06485 CD007_06490 PF14172 CD007_06490 CD007_06495 PF00384 Molybdopterin oxidoreductase CD007_06495 PF01568 Molydopterin dinucleotide binding domain CD007_06495 PF04879 Molybdopterin oxidoreductase Fe4S4 domain CD007_06495 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region CD007_06495 PF12838 4Fe-4S dicluster domain CD007_06495 PF13510 2Fe-2S iron-sulfur cluster binding domain CD007_06500 PF07849 CD007_06500 CD007_06505 PF11611 Domain of unknown function (DUF4352) CD007_06520 PF00067 Cytochrome P450 CD007_06525 PF04101 Glycosyltransferase family 28 C-terminal domain CD007_06530 PF02086 D12 class N6 adenine-specific DNA methyltransferase CD007_06535 PF13304 AAA domain CD007_06545 PF02602 Uroporphyrinogen-III synthase HemD CD007_06550 PF03649 CD007_06550 CD007_06555 PF00005 ABC transporter CD007_06560 PF13536 Multidrug resistance efflux transporter CD007_06565 PF07883 Cupin domain CD007_06570 PF07849 CD007_06570 CD007_06575 PF07992 Pyridine nucleotide-disulphide oxidoreductase CD007_06580 PF02614 Glucuronate isomerase CD007_06585 PF13347 MFS/sugar transport protein CD007_06590 PF02615 Malate/L-lactate dehydrogenase CD007_06595 PF00107 Zinc-binding dehydrogenase CD007_06595 PF08240 Alcohol dehydrogenase GroES-like domain CD007_06600 PF03786 D-mannonate dehydratase (UxuA) CD007_06605 PF00106 short chain dehydrogenase CD007_06610 PF07690 Major Facilitator Superfamily CD007_06615 PF00356 Bacterial regulatory proteins, lacI family CD007_06615 PF13377 Periplasmic binding protein-like domain CD007_06620 PF01232 Mannitol dehydrogenase Rossmann domain CD007_06620 PF08125 Mannitol dehydrogenase C-terminal domain CD007_06625 PF04295 CD007_06625 CD007_06625 PF08666 SAF domain CD007_06630 PF01925 CD007_06630 CD007_06635 PF05163 DinB family CD007_06640 PF00004 ATPase family associated with various cellular activities (AAA) CD007_06645 PF13424 Tetratricopeptide repeat CD007_06655 PF03795 YCII-related domain CD007_06660 PF01471 Putative peptidoglycan binding domain CD007_06660 PF01476 LysM domain CD007_06660 PF01510 N-acetylmuramoyl-L-alanine amidase CD007_06665 PF08000 Bacterial PH domain CD007_06670 PF05908 Protein of unknown function (DUF867) CD007_06675 PF05067 Manganese containing catalase CD007_06680 PF06114 Domain of unknown function (DUF955) CD007_06685 PF01381 Helix-turn-helix CD007_06700 PF01695 IstB-like ATP binding protein CD007_06715 PF17356 CD007_06715 CD007_06720 PF08281 Sigma-70, region 4 CD007_06725 PF03592 Terminase small subunit CD007_06725 PF10668 CD007_06725 CD007_06730 PF04466 Phage terminase large subunit CD007_06730 PF17288 CD007_06730 CD007_06735 PF04860 Phage portal protein CD007_06740 PF14550 CD007_06740 CD007_06745 PF05065 Phage capsid family CD007_06750 PF11436 Protein of unknown function (DUF3199) CD007_06755 PF12206 Domain of unknown function (DUF3599) CD007_06760 PF04883 CD007_06760 CD007_06775 PF04984 Phage tail sheath protein CD007_06775 PF17481 CD007_06775 CD007_06775 PF17482 CD007_06775 CD007_06780 PF09393 Protein of unknown function (DUF2001) CD007_06785 PF08890 Phage XkdN-like protein CD007_06795 PF01464 Transglycosylase SLT domain CD007_06800 PF01476 LysM domain CD007_06810 PF10844 CD007_06810 CD007_06815 PF10934 CD007_06815 CD007_06820 PF04865 CD007_06820 CD007_06825 PF10076 CD007_06825 CD007_06840 PF09636 XkdW protein CD007_06845 PF09693 CD007_06845 CD007_06855 PF10779 CD007_06855 CD007_06860 PF04688 CD007_06860 CD007_06865 PF01471 Putative peptidoglycan binding domain CD007_06865 PF01476 LysM domain CD007_06865 PF01510 N-acetylmuramoyl-L-alanine amidase CD007_06870 PF14185 Antitoxin SpoIISB, type II toxin-antitoxin system CD007_06875 PF14171 Toxin SpoIISA, type II toxin-antitoxin system CD007_06880 PF01384 CD007_06880 CD007_06885 PF01865 Protein of unknown function DUF47 CD007_06890 PF13520 Amino acid permease CD007_06895 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CD007_06900 PF13231 CD007_06900 CD007_06905 PF00535 Glycosyl transferase family 2 CD007_06910 PF13180 PDZ domain CD007_06910 PF13365 Trypsin-like peptidase domain CD007_06915 PF03807 NADP oxidoreductase coenzyme F420-dependent CD007_06915 PF14748 Pyrroline-5-carboxylate reductase dimerisation CD007_06920 PF04951 D-aminopeptidase CD007_06925 PF00528 Binding-protein-dependent transport system inner membrane component CD007_06930 PF00528 Binding-protein-dependent transport system inner membrane component CD007_06930 PF12911 CD007_06930 CD007_06935 PF00005 ABC transporter CD007_06935 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CD007_06940 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CD007_06945 PF02016 LD-carboxypeptidase CD007_06950 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain CD007_06950 PF13378 Enolase C-terminal domain-like CD007_06955 PF00877 NlpC/P60 family CD007_06960 PF00005 ABC transporter CD007_06960 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CD007_06965 PF10282 Lactonase, 7-bladed beta-propeller CD007_06970 PF02274 Amidinotransferase CD007_06975 PF03061 Thioesterase superfamily CD007_06980 PF00042 Globin CD007_06980 PF00175 Oxidoreductase NAD-binding domain CD007_06980 PF00970 Oxidoreductase FAD-binding domain CD007_06990 PF04239 Protein of unknown function (DUF421) CD007_06995 PF12867 DinB superfamily CD007_07000 PF13302 Acetyltransferase (GNAT) domain CD007_07005 PF00893 Small Multidrug Resistance protein CD007_07010 PF00893 Small Multidrug Resistance protein CD007_07015 PF00551 Formyl transferase CD007_07015 PF01842 ACT domain CD007_07020 PF00696 Amino acid kinase family CD007_07020 PF01472 PUA domain CD007_07025 PF00171 Aldehyde dehydrogenase family CD007_07030 PF02566 OsmC-like protein CD007_07035 PF01047 MarR family CD007_07040 PF02566 OsmC-like protein CD007_07050 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region CD007_07055 PF01717 Cobalamin-independent synthase, Catalytic domain CD007_07055 PF08267 Cobalamin-independent synthase, N-terminal domain CD007_07060 PF00082 Subtilase family CD007_07065 PF01740 STAS domain CD007_07070 PF02361 Cobalt transport protein CD007_07075 PF00005 ABC transporter CD007_07080 PF09819 CD007_07080 CD007_07085 PF07615 YKOF-related Family CD007_07090 PF00072 Response regulator receiver domain CD007_07090 PF00486 Transcriptional regulatory protein, C terminal CD007_07095 PF00512 His Kinase A (phospho-acceptor) domain CD007_07095 PF00672 HAMP domain CD007_07095 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CD007_07100 PF03413 Peptidase propeptide and YPEB domain CD007_07105 PF03413 Peptidase propeptide and YPEB domain CD007_07110 PF11132 CD007_07110 CD007_07120 PF00571 CBS domain CD007_07120 PF01769 Divalent cation transporter CD007_07120 PF03448 MgtE intracellular N domain CD007_07125 PF13411 MerR HTH family regulatory protein CD007_07140 PF01047 MarR family CD007_07145 PF06925 CD007_07145 CD007_07155 PF00149 Calcineurin-like phosphoesterase CD007_07165 PF00535 Glycosyl transferase family 2 CD007_07170 PF01068 ATP dependent DNA ligase domain CD007_07175 PF02735 Ku70/Ku80 beta-barrel domain CD007_07180 PF00563 EAL domain CD007_07180 PF00990 GGDEF domain CD007_07180 PF03707 CD007_07180 CD007_07185 PF09335 CD007_07185 CD007_07190 PF03741 CD007_07190 CD007_07195 PF04542 Sigma-70 region 2 CD007_07200 PF12791 CD007_07200 CD007_07205 PF00269 Small, acid-soluble spore proteins, alpha/beta type CD007_07210 PF08876 CD007_07210 CD007_07215 PF01435 Peptidase family M48 CD007_07220 PF02386 Cation transport protein CD007_07235 PF01757 CD007_07235 CD007_07240 PF00512 His Kinase A (phospho-acceptor) domain CD007_07240 PF00989 PAS fold CD007_07240 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CD007_07240 PF13188 PAS domain CD007_07240 PF13426 PAS domain CD007_07245 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain CD007_07245 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain CD007_07250 PF01008 Initiation factor 2 subunit family CD007_07255 PF01636 Phosphotransferase enzyme family CD007_07260 PF00795 Carbon-nitrogen hydrolase CD007_07265 PF00155 Aminotransferase class I and II CD007_07270 PF00016 Ribulose bisphosphate carboxylase large chain, catalytic domain CD007_07270 PF02788 Ribulose bisphosphate carboxylase large chain, N-terminal domain CD007_07275 PF12710 haloacid dehalogenase-like hydrolase CD007_07280 PF00596 Class II Aldolase and Adducin N-terminal domain CD007_07285 PF03079 ARD/ARD' family CD007_07290 PF06803 CD007_07290 CD007_07295 PF09388 Spo0E like sporulation regulatory protein CD007_07305 PF00512 His Kinase A (phospho-acceptor) domain CD007_07305 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CD007_07305 PF02743 Cache domain CD007_07310 PF01047 MarR family CD007_07315 PF00691 OmpA family CD007_07315 PF13677 CD007_07315 CD007_07320 PF01618 CD007_07320 CD007_07330 PF00004 ATPase family associated with various cellular activities (AAA) CD007_07330 PF02151 UvrB/uvrC motif CD007_07330 PF07724 AAA domain (Cdc48 subfamily) CD007_07330 PF10431 C-terminal, D2-small domain, of ClpB protein CD007_07340 PF06508 Queuosine biosynthesis protein QueC CD007_07345 PF01242 6-pyruvoyl tetrahydropterin synthase CD007_07350 PF04055 Radical SAM superfamily CD007_07350 PF13394 4Fe-4S single cluster domain CD007_07355 PF14489 QueF-like protein CD007_07360 PF01638 HxlR-like helix-turn-helix CD007_07365 PF13561 Enoyl-(Acyl carrier protein) reductase CD007_07370 PF01476 LysM domain CD007_07370 PF13524 Glycosyl transferases group 1 CD007_07375 PF01476 LysM domain CD007_07380 PF00704 Glycosyl hydrolases family 18 CD007_07390 PF11514 Protein of unknown function (DUF3219) CD007_07395 PF09953 CD007_07395 CD007_07405 PF07486 Cell Wall Hydrolase CD007_07410 PF01943 CD007_07410 CD007_07415 PF00578 AhpC/TSA family CD007_07420 PF00122 E1-E2 ATPase CD007_07420 PF00702 haloacid dehalogenase-like hydrolase CD007_07430 PF00557 Metallopeptidase family M24 CD007_07430 PF01321 Creatinase/Prolidase N-terminal domain CD007_07435 PF00356 Bacterial regulatory proteins, lacI family CD007_07435 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family CD007_07440 PF00874 PRD domain CD007_07440 PF03123 CAT RNA binding domain CD007_07445 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 CD007_07445 PF00367 phosphotransferase system, EIIB CD007_07445 PF02378 Phosphotransferase system, EIIC CD007_07450 PF00381 PTS HPr component phosphorylation site CD007_07455 PF00391 PEP-utilising enzyme, mobile domain CD007_07455 PF02896 PEP-utilising enzyme, TIM barrel domain CD007_07455 PF05524 PEP-utilising enzyme, N-terminal CD007_07460 PF11132 CD007_07460 CD007_07470 PF00583 Acetyltransferase (GNAT) family CD007_07475 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CD007_07475 PF00672 HAMP domain CD007_07475 PF02743 Cache domain CD007_07480 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase CD007_07480 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase CD007_07485 PF00188 Cysteine-rich secretory protein family CD007_07490 PF00905 Penicillin binding protein transpeptidase domain CD007_07490 PF03717 Penicillin-binding Protein dimerisation domain CD007_07495 PF00512 His Kinase A (phospho-acceptor) domain CD007_07495 PF00989 PAS fold CD007_07495 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CD007_07495 PF08447 PAS fold CD007_07500 PF00155 Aminotransferase class I and II CD007_07510 PF00072 Response regulator receiver domain CD007_07510 PF01584 CheW-like domain CD007_07515 PF14177 CD007_07515 CD007_07520 PF07690 Major Facilitator Superfamily CD007_07525 PF01476 LysM domain CD007_07525 PF03734 L,D-transpeptidase catalytic domain CD007_07530 PF00149 Calcineurin-like phosphoesterase CD007_07530 PF10518 TAT (twin-arginine translocation) pathway signal sequence CD007_07535 PF13561 Enoyl-(Acyl carrier protein) reductase CD007_07540 PF00563 EAL domain CD007_07540 PF10388 EAL-domain associated signalling protein domain CD007_07545 PF08796 Protein of unknown function (DUF1797) CD007_07550 PF04308 CD007_07550 CD007_07555 PF14156 Antirepressor AbbA CD007_07565 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CD007_07565 PF03466 LysR substrate binding domain CD007_07570 PF00258 Flavodoxin CD007_07580 PF00258 Flavodoxin CD007_07585 PF00132 Bacterial transferase hexapeptide (six repeats) CD007_07585 PF08503 Tetrahydrodipicolinate succinyltransferase N-terminal CD007_07585 PF14602 Hexapeptide repeat of succinyl-transferase CD007_07590 PF01546 Peptidase family M20/M25/M40 CD007_07590 PF07687 Peptidase dimerisation domain CD007_07595 PF03698 CD007_07595 CD007_07600 PF00924 Mechanosensitive ion channel CD007_07605 PF00578 AhpC/TSA family CD007_07605 PF10417 C-terminal domain of 1-Cys peroxiredoxin CD007_07610 PF00578 AhpC/TSA family CD007_07625 PF12804 MobA-like NTP transferase domain CD007_07630 PF00899 ThiF family CD007_07635 PF00994 Probable molybdopterin binding domain CD007_07635 PF03453 MoeA N-terminal region (domain I and II) CD007_07635 PF03454 MoeA C-terminal region (domain IV) CD007_07640 PF03205 Molybdopterin guanine dinucleotide synthesis protein B CD007_07645 PF02391 MoaE protein CD007_07650 PF02597 ThiS family CD007_07655 PF00005 ABC transporter CD007_07655 PF00664 ABC transporter transmembrane region CD007_07660 PF00005 ABC transporter CD007_07660 PF00664 ABC transporter transmembrane region CD007_07665 PF04893 CD007_07665 CD007_07670 PF16576 CD007_07670 CD007_07675 PF00005 ABC transporter CD007_07680 PF02687 CD007_07680 CD007_07680 PF12704 MacB-like periplasmic core domain CD007_07685 PF00455 CD007_07685 CD007_07685 PF08220 DeoR-like helix-turn-helix domain CD007_07690 PF00294 pfkB family carbohydrate kinase CD007_07695 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CD007_07695 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CD007_07700 PF00717 Peptidase S24-like CD007_07710 PF00005 ABC transporter CD007_07710 PF12848 ABC transporter CD007_07715 PF02558 Ketopantoate reductase PanE/ApbA CD007_07715 PF08546 Ketopantoate reductase PanE/ApbA C terminal CD007_07720 PF02073 Thermophilic metalloprotease (M29) CD007_07725 PF17447 CD007_07725 CD007_07730 PF06723 MreB/Mbl protein CD007_07735 PF04014 Antidote-toxin recognition MazE CD007_07740 PF00512 His Kinase A (phospho-acceptor) domain CD007_07740 PF00989 PAS fold CD007_07740 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CD007_07745 PF06094 AIG2-like family CD007_07745 PF13772 AIG2-like family CD007_07750 PF02080 TrkA-C domain CD007_07750 PF02254 TrkA-N domain CD007_07755 PF01979 Amidohydrolase family CD007_07755 PF13382 Adenine deaminase C-terminal domain CD007_07760 PF00753 Metallo-beta-lactamase superfamily CD007_07760 PF07521 RNA-metabolising metallo-beta-lactamase CD007_07765 PF07288 Protein of unknown function (DUF1447) CD007_07770 PF08282 haloacid dehalogenase-like hydrolase CD007_07775 PF01327 Polypeptide deformylase CD007_07780 PF09680 CD007_07780 CD007_07785 PF10368 Putative cell-wall binding lipoprotein CD007_07790 PF00676 Dehydrogenase E1 component CD007_07795 PF02779 Transketolase, pyrimidine binding domain CD007_07795 PF02780 Transketolase, C-terminal domain CD007_07800 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) CD007_07800 PF00364 Biotin-requiring enzyme CD007_07800 PF02817 e3 binding domain CD007_07805 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CD007_07805 PF07992 Pyridine nucleotide-disulphide oxidoreductase CD007_07815 PF13790 CD007_07815 CD007_07820 PF01276 Orn/Lys/Arg decarboxylase, major domain CD007_07820 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain CD007_07825 PF05256 Uncharacterised protein family (UPF0223) CD007_07830 PF06335 Protein of unknown function (DUF1054) CD007_07840 PF00459 Inositol monophosphatase family CD007_07845 PF00583 Acetyltransferase (GNAT) family CD007_07850 PF04072 Leucine carboxyl methyltransferase CD007_07860 PF01447 Thermolysin metallopeptidase, catalytic domain CD007_07860 PF02868 Thermolysin metallopeptidase, alpha-helical domain CD007_07860 PF03413 Peptidase propeptide and YPEB domain CD007_07860 PF07504 Fungalysin/Thermolysin Propeptide Motif CD007_07880 PF13490 Putative zinc-finger CD007_07890 PF17259 CD007_07890 CD007_07895 PF00009 Elongation factor Tu GTP binding domain CD007_07895 PF00679 Elongation factor G C-terminus CD007_07895 PF03144 Elongation factor Tu domain 2 CD007_07895 PF14492 Elongation Factor G, domain II CD007_07900 PF14036 CD007_07900 CD007_07905 PF09963 CD007_07905 CD007_07910 PF09580 CD007_07910 CD007_07915 PF02562 PhoH-like protein CD007_07915 PF13638 PIN domain CD007_07925 PF04960 Glutaminase CD007_07930 PF07408 Protein of unknown function (DUF1507) CD007_07935 PF01098 CD007_07935 CD007_07940 PF00289 Carbamoyl-phosphate synthase L chain, N-terminal domain CD007_07940 PF00364 Biotin-requiring enzyme CD007_07940 PF00682 HMGL-like CD007_07940 PF02436 Conserved carboxylase domain CD007_07940 PF02785 Biotin carboxylase C-terminal domain CD007_07940 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain CD007_07945 PF02628 CD007_07945 CD007_07950 PF01040 UbiA prenyltransferase family CD007_07955 PF00034 Cytochrome c CD007_07955 PF00116 Cytochrome C oxidase subunit II, periplasmic domain CD007_07955 PF02790 Cytochrome C oxidase subunit II, transmembrane domain CD007_07960 PF00115 Cytochrome C and Quinol oxidase polypeptide I CD007_07965 PF00510 Cytochrome c oxidase subunit III CD007_07970 PF03626 CD007_07970 CD007_07975 PF09678 CD007_07975 CD007_07980 PF08868 YugN-like family CD007_07985 PF00571 CBS domain CD007_07990 PF00188 Cysteine-rich secretory protein family CD007_07990 PF14504 CAP-associated N-terminal CD007_07995 PF14071 CD007_07995 CD007_08000 PF14003 CD007_08000 CD007_08005 PF06133 Protein of unknown function (DUF964) CD007_08010 PF09902 CD007_08010 CD007_08015 PF03602 Conserved hypothetical protein 95 CD007_08020 PF01467 Cytidylyltransferase CD007_08025 PF07670 Nucleoside recognition CD007_08030 PF01734 Patatin-like phospholipase CD007_08035 PF05362 Lon protease (S16) C-terminal proteolytic domain CD007_08035 PF13180 PDZ domain CD007_08040 PF05636 HIGH Nucleotidyl Transferase CD007_08050 PF02620 CD007_08050 CD007_08055 PF01783 Ribosomal L32p protein family CD007_08060 PF13921 Myb-like DNA-binding domain CD007_08065 PF00583 Acetyltransferase (GNAT) family CD007_08070 PF02558 Ketopantoate reductase PanE/ApbA CD007_08070 PF08546 Ketopantoate reductase PanE/ApbA C terminal CD007_08075 PF10079 CD007_08075 CD007_08080 PF02381 MraZ protein CD007_08085 PF01795 MraW methylase family CD007_08095 PF00905 Penicillin binding protein transpeptidase domain CD007_08095 PF03717 Penicillin-binding Protein dimerisation domain CD007_08095 PF03793 PASTA domain CD007_08100 PF00905 Penicillin binding protein transpeptidase domain CD007_08100 PF03717 Penicillin-binding Protein dimerisation domain CD007_08100 PF03793 PASTA domain CD007_08105 PF01225 Mur ligase family, catalytic domain CD007_08105 PF02875 Mur ligase family, glutamate ligase domain CD007_08105 PF08245 Mur ligase middle domain CD007_08110 PF00953 Glycosyl transferase family 4 CD007_08110 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 CD007_08115 PF02875 Mur ligase family, glutamate ligase domain CD007_08115 PF08245 Mur ligase middle domain CD007_08120 PF01098 CD007_08120 CD007_08125 PF03033 Glycosyltransferase family 28 N-terminal domain CD007_08125 PF04101 Glycosyltransferase family 28 C-terminal domain CD007_08130 PF01565 FAD binding domain CD007_08130 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain CD007_08135 PF03799 Cell division protein FtsQ CD007_08135 PF08478 POTRA domain, FtsQ-type CD007_08140 PF05949 Bacterial protein of unknown function (DUF881) CD007_08145 PF05949 Bacterial protein of unknown function (DUF881) CD007_08150 PF06947 CD007_08150 CD007_08155 PF02491 SHS2 domain inserted in FTSA CD007_08155 PF14450 Cell division protein FtsA CD007_08160 PF00091 Tubulin/FtsZ family, GTPase domain CD007_08160 PF12327 FtsZ family, C-terminal domain CD007_08165 PF00082 Subtilase family CD007_08165 PF05547 CD007_08165 CD007_08165 PF05922 Peptidase inhibitor I9 CD007_08165 PF13715 CD007_08165 CD007_08170 PF03419 CD007_08170 CD007_08175 PF04542 Sigma-70 region 2 CD007_08175 PF04545 Sigma-70, region 4 CD007_08180 PF04539 Sigma-70 region 3 CD007_08180 PF04542 Sigma-70 region 2 CD007_08180 PF04545 Sigma-70, region 4 CD007_08185 PF00005 ABC transporter CD007_08190 PF01546 Peptidase family M20/M25/M40 CD007_08190 PF07687 Peptidase dimerisation domain CD007_08195 PF05239 PRC-barrel domain CD007_08200 PF02578 Multi-copper polyphenol oxidoreductase laccase CD007_08205 PF01168 Alanine racemase, N-terminal domain CD007_08210 PF04472 Protein of unknown function (DUF552) CD007_08215 PF02325 CD007_08215 CD007_08220 PF01479 S4 domain CD007_08225 PF05103 DivIVA protein CD007_08230 PF00133 tRNA synthetases class I (I, L, M and V) CD007_08230 PF08264 Anticodon-binding domain of tRNA CD007_08240 PF01252 CD007_08240 CD007_08245 PF00849 RNA pseudouridylate synthase CD007_08245 PF01479 S4 domain CD007_08250 PF00156 Phosphoribosyl transferase domain CD007_08255 PF00860 Permease family CD007_08260 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain CD007_08260 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain CD007_08265 PF01979 Amidohydrolase family CD007_08270 PF00117 Glutamine amidotransferase class-I CD007_08270 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain CD007_08275 PF02142 MGS-like domain CD007_08275 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain CD007_08275 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain CD007_08280 PF00175 Oxidoreductase NAD-binding domain CD007_08280 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B CD007_08285 PF01180 Dihydroorotate dehydrogenase CD007_08290 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family CD007_08295 PF00156 Phosphoribosyl transferase domain CD007_08300 PF01507 Phosphoadenosine phosphosulfate reductase family CD007_08305 PF01384 CD007_08305 CD007_08310 PF01747 ATP-sulfurylase CD007_08310 PF14306 PUA-like domain CD007_08315 PF01583 Adenylylsulphate kinase CD007_08320 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CD007_08325 PF01903 CbiX CD007_08330 PF13241 Putative NAD(P)-binding CD007_08335 PF05670 CD007_08335 CD007_08335 PF05833 Fibronectin-binding protein A N-terminus (FbpA) CD007_08340 PF00122 E1-E2 ATPase CD007_08340 PF00689 Cation transporting ATPase, C-terminus CD007_08340 PF00690 Cation transporter/ATPase, N-terminus CD007_08340 PF00702 haloacid dehalogenase-like hydrolase CD007_08345 PF03755 CD007_08345 CD007_08345 PF08340 CD007_08345 CD007_08350 PF04025 CD007_08350 CD007_08355 PF00625 Guanylate kinase CD007_08360 PF01192 RNA polymerase Rpb6 CD007_08365 PF02441 Flavoprotein CD007_08365 PF04127 DNA / pantothenate metabolism flavoprotein CD007_08370 PF00271 Helicase conserved C-terminal domain CD007_08370 PF04851 Type III restriction enzyme, res subunit CD007_08375 PF01327 Polypeptide deformylase CD007_08380 PF00551 Formyl transferase CD007_08380 PF02911 Formyl transferase, C-terminal domain CD007_08385 PF01029 NusB family CD007_08385 PF01189 NOL1/NOP2/sun family CD007_08390 PF04055 Radical SAM superfamily CD007_08390 PF13394 4Fe-4S single cluster domain CD007_08395 PF13672 Protein phosphatase 2C CD007_08400 PF00069 Protein kinase domain CD007_08400 PF03793 PASTA domain CD007_08405 PF03193 Protein of unknown function, DUF258 CD007_08405 PF16745 CD007_08405 CD007_08410 PF00834 Ribulose-phosphate 3 epimerase family CD007_08415 PF04263 Thiamin pyrophosphokinase, catalytic domain CD007_08415 PF04265 Thiamin pyrophosphokinase, vitamin B1 binding domain CD007_08420 PF08183 CD007_08420 CD007_08425 PF00830 Ribosomal L28 family CD007_08430 PF03780 CD007_08430 CD007_08435 PF02734 DAK2 domain CD007_08435 PF13684 Dihydroxyacetone kinase family CD007_08440 PF01842 ACT domain CD007_08440 PF03315 Serine dehydratase beta chain CD007_08445 PF03313 CD007_08445 CD007_08450 PF00270 DEAD/DEAH box helicase CD007_08450 PF00271 Helicase conserved C-terminal domain CD007_08450 PF17191 CD007_08450 CD007_08455 PF03061 Thioesterase superfamily CD007_08460 PF02504 Fatty acid synthesis protein CD007_08465 PF00698 Acyl transferase domain CD007_08470 PF13561 Enoyl-(Acyl carrier protein) reductase CD007_08475 PF00550 Phosphopantetheine attachment site CD007_08480 PF00035 Double-stranded RNA binding motif CD007_08480 PF14622 Ribonuclease-III-like CD007_08485 PF02463 RecF/RecN/SMC N terminal domain CD007_08485 PF06470 SMC proteins Flexible Hinge Domain CD007_08490 PF00448 SRP54-type protein, GTPase domain CD007_08490 PF02881 SRP54-type protein, helical bundle domain CD007_08495 PF13620 Carboxypeptidase regulatory-like domain CD007_08500 PF04297 Putative helix-turn-helix protein, YlxM / p13 like CD007_08505 PF00448 SRP54-type protein, GTPase domain CD007_08505 PF02881 SRP54-type protein, helical bundle domain CD007_08505 PF02978 Signal peptide binding domain CD007_08510 PF00886 Ribosomal protein S16 CD007_08515 PF13083 KH domain CD007_08520 PF11068 YlqD protein CD007_08525 PF01782 RimM N-terminal domain CD007_08525 PF05239 PRC-barrel domain CD007_08530 PF01746 tRNA (Guanine-1)-methyltransferase CD007_08535 PF01245 Ribosomal protein L19 CD007_08540 PF01926 50S ribosome-binding GTPase CD007_08545 PF01351 Ribonuclease HII CD007_08555 PF01312 FlhB HrpN YscU SpaS Family CD007_08560 PF00549 CoA-ligase CD007_08560 PF08442 ATP-grasp domain CD007_08565 PF00549 CoA-ligase CD007_08565 PF02629 CoA binding domain CD007_08570 PF02481 DNA recombination-mediator protein A CD007_08575 PF01131 DNA topoisomerase CD007_08575 PF01396 CD007_08575 CD007_08575 PF01751 Toprim domain CD007_08580 PF01134 Glucose inhibited division protein A CD007_08585 PF00589 Phage integrase family CD007_08585 PF02899 Phage integrase, N-terminal SAM-like domain CD007_08590 PF00227 Proteasome subunit CD007_08595 PF00004 ATPase family associated with various cellular activities (AAA) CD007_08595 PF07724 AAA domain (Cdc48 subfamily) CD007_08595 PF10431 C-terminal, D2-small domain, of ClpB protein CD007_08600 PF06018 CodY GAF-like domain CD007_08600 PF08222 CodY helix-turn-helix domain CD007_08605 PF00460 Flagella basal body rod protein CD007_08610 PF00460 Flagella basal body rod protein CD007_08610 PF06429 Flagellar basal body rod FlgEFG protein C-terminal CD007_08615 PF02049 CD007_08615 CD007_08620 PF01514 Secretory protein of YscJ/FliF family CD007_08620 PF08345 CD007_08620 CD007_08625 PF01706 FliG C-terminal domain CD007_08625 PF14841 FliG middle domain CD007_08625 PF14842 FliG N-terminal domain CD007_08630 PF02108 CD007_08630 CD007_08635 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CD007_08635 PF02874 ATP synthase alpha/beta family, beta-barrel domain CD007_08640 PF02050 Flagellar FliJ protein CD007_08645 PF03448 MgtE intracellular N domain CD007_08650 PF02120 Flagellar hook-length control protein FliK CD007_08655 PF03963 CD007_08655 CD007_08660 PF00460 Flagella basal body rod protein CD007_08660 PF06429 Flagellar basal body rod FlgEFG protein C-terminal CD007_08665 PF06289 CD007_08665 CD007_08670 PF03748 CD007_08670 CD007_08675 PF01052 Surface presentation of antigens (SPOA) CD007_08675 PF02154 Flagellar motor switch protein FliM CD007_08680 PF01052 Surface presentation of antigens (SPOA) CD007_08680 PF04509 CheC-like family CD007_08685 PF00072 Response regulator receiver domain CD007_08690 PF04347 CD007_08690 CD007_08695 PF00813 CD007_08695 CD007_08700 PF01313 CD007_08700 CD007_08705 PF01311 CD007_08705 CD007_08710 PF01312 FlhB HrpN YscU SpaS Family CD007_08715 PF00771 FHIPEP family CD007_08720 PF00448 SRP54-type protein, GTPase domain CD007_08725 PF10609 ParA/MinD ATPase like CD007_08730 PF00072 Response regulator receiver domain CD007_08730 PF01339 CheB methylesterase CD007_08735 PF01584 CheW-like domain CD007_08735 PF01627 Hpt domain CD007_08735 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CD007_08735 PF02895 Signal transducing histidine kinase, homodimeric domain CD007_08735 PF07194 P2 response regulator binding domain CD007_08740 PF01584 CheW-like domain CD007_08745 PF04509 CheC-like family CD007_08750 PF03975 CheD chemotactic sensory transduction CD007_08755 PF04539 Sigma-70 region 3 CD007_08755 PF04542 Sigma-70 region 2 CD007_08755 PF04545 Sigma-70, region 4 CD007_08765 PF00318 Ribosomal protein S2 CD007_08770 PF00889 Elongation factor TS CD007_08775 PF00696 Amino acid kinase family CD007_08780 PF01765 Ribosome recycling factor CD007_08785 PF01255 Putative undecaprenyl diphosphate synthase CD007_08790 PF01148 Cytidylyltransferase family CD007_08795 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase CD007_08795 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal CD007_08795 PF13288 DXP reductoisomerase C-terminal domain CD007_08800 PF02163 Peptidase family M50 CD007_08805 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CD007_08805 PF03129 Anticodon binding domain CD007_08805 PF04073 Aminoacyl-tRNA editing domain CD007_08810 PF00929 Exonuclease CD007_08810 PF02811 PHP domain CD007_08810 PF07733 Bacterial DNA polymerase III alpha subunit CD007_08810 PF11490 CD007_08810 CD007_08810 PF14480 CD007_08810 CD007_08810 PF14579 Helix-hairpin-helix motif CD007_08820 PF04738 CD007_08820 CD007_08820 PF14028 CD007_08820 CD007_08825 PF00005 ABC transporter CD007_08830 PF05147 Lanthionine synthetase C-like protein CD007_08835 PF02576 Uncharacterised BCR, YhbC family COG0779 CD007_08835 PF17384 CD007_08835 CD007_08840 PF00575 S1 RNA binding domain CD007_08840 PF08529 NusA N-terminal domain CD007_08840 PF13184 NusA-like KH domain CD007_08845 PF04296 Protein of unknown function (DUF448) CD007_08850 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family CD007_08855 PF00009 Elongation factor Tu GTP binding domain CD007_08855 PF04760 Translation initiation factor IF-2, N-terminal region CD007_08855 PF11987 Translation-initiation factor 2 CD007_08860 PF04456 Protein of unknown function (DUF503) CD007_08865 PF02033 Ribosome-binding factor A CD007_08870 PF01509 TruB family pseudouridylate synthase (N terminal domain) CD007_08870 PF16198 CD007_08870 CD007_08875 PF01687 Riboflavin kinase CD007_08875 PF06574 FAD synthetase CD007_08880 PF00312 Ribosomal protein S15 CD007_08885 PF00013 KH domain CD007_08885 PF00575 S1 RNA binding domain CD007_08885 PF01138 3' exoribonuclease family, domain 1 CD007_08885 PF03725 3' exoribonuclease family, domain 2 CD007_08885 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain CD007_08890 PF01522 Polysaccharide deacetylase CD007_08895 PF00675 Insulinase (Peptidase family M16) CD007_08895 PF05193 Peptidase M16 inactive domain CD007_08900 PF05239 PRC-barrel domain CD007_08905 PF01262 Alanine dehydrogenase/PNT, C-terminal domain CD007_08905 PF16924 CD007_08905 CD007_08910 PF02441 Flavoprotein CD007_08915 PF01118 Semialdehyde dehydrogenase, NAD binding domain CD007_08915 PF02774 Semialdehyde dehydrogenase, dimerisation domain CD007_08920 PF00696 Amino acid kinase family CD007_08920 PF13840 ACT domain CD007_08925 PF00701 Dihydrodipicolinate synthetase family CD007_08930 PF00753 Metallo-beta-lactamase superfamily CD007_08930 PF07521 RNA-metabolising metallo-beta-lactamase CD007_08935 PF00574 Clp protease CD007_08940 PF14035 CD007_08940 CD007_08945 PF01580 FtsK/SpoIIIE family CD007_08945 PF09397 Ftsk gamma domain CD007_08950 PF00392 Bacterial regulatory proteins, gntR family CD007_08950 PF07702 UTRA domain CD007_08955 PF07690 Major Facilitator Superfamily CD007_08960 PF05193 Peptidase M16 inactive domain CD007_08965 PF00675 Insulinase (Peptidase family M16) CD007_08965 PF05193 Peptidase M16 inactive domain CD007_08970 PF13561 Enoyl-(Acyl carrier protein) reductase CD007_08975 PF11588 Protein of unknown function (DUF3243) CD007_08980 PF11868 CD007_08980 CD007_08985 PF13413 Helix-turn-helix domain CD007_08985 PF13464 CD007_08985 CD007_08990 PF01066 CDP-alcohol phosphatidyltransferase CD007_08995 PF00994 Probable molybdopterin binding domain CD007_08995 PF02464 Competence-damaged protein CD007_09000 PF00154 recA bacterial DNA recombination protein CD007_09005 PF00144 Beta-lactamase CD007_09010 PF00013 KH domain CD007_09010 PF01966 HD domain CD007_09010 PF12072 CD007_09010 CD007_09015 PF13277 YmdB-like protein CD007_09020 PF04232 Stage V sporulation protein S (SpoVS) CD007_09025 PF00107 Zinc-binding dehydrogenase CD007_09025 PF08240 Alcohol dehydrogenase GroES-like domain CD007_09030 PF00155 Aminotransferase class I and II CD007_09035 PF00919 Uncharacterized protein family UPF0004 CD007_09035 PF01938 TRAM domain CD007_09035 PF04055 Radical SAM superfamily CD007_09040 PF06133 Protein of unknown function (DUF964) CD007_09045 PF10628 CD007_09045 CD007_09050 PF00488 MutS domain V CD007_09050 PF01624 MutS domain I CD007_09050 PF05188 MutS domain II CD007_09050 PF05190 MutS family domain IV CD007_09050 PF05192 MutS domain III CD007_09055 PF01119 DNA mismatch repair protein, C-terminal domain CD007_09055 PF08676 MutL C terminal dimerisation domain CD007_09055 PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CD007_09060 PF14184 CD007_09060 CD007_09070 PF00440 Bacterial regulatory proteins, tetR family CD007_09070 PF13977 Bacterial transcriptional repressor CD007_09075 PF00753 Metallo-beta-lactamase superfamily CD007_09085 PF00698 Acyl transferase domain CD007_09090 PF00698 Acyl transferase domain CD007_09095 PF00698 Acyl transferase domain CD007_09095 PF03060 Nitronate monooxygenase CD007_09100 PF00550 Phosphopantetheine attachment site CD007_09105 PF00109 Beta-ketoacyl synthase, N-terminal domain CD007_09105 PF02801 Beta-ketoacyl synthase, C-terminal domain CD007_09110 PF01154 Hydroxymethylglutaryl-coenzyme A synthase N terminal CD007_09110 PF08540 Hydroxymethylglutaryl-coenzyme A synthase C terminal CD007_09115 PF00378 Enoyl-CoA hydratase/isomerase family CD007_09120 PF00378 Enoyl-CoA hydratase/isomerase family CD007_09125 PF00109 Beta-ketoacyl synthase, N-terminal domain CD007_09125 PF00501 AMP-binding enzyme CD007_09125 PF00550 Phosphopantetheine attachment site CD007_09125 PF00668 Condensation domain CD007_09125 PF02801 Beta-ketoacyl synthase, C-terminal domain CD007_09125 PF08659 KR domain CD007_09125 PF13193 AMP-binding enzyme C-terminal domain CD007_09125 PF14765 Polyketide synthase dehydratase CD007_09125 PF16197 CD007_09125 CD007_09130 PF00109 Beta-ketoacyl synthase, N-terminal domain CD007_09130 PF00550 Phosphopantetheine attachment site CD007_09130 PF02801 Beta-ketoacyl synthase, C-terminal domain CD007_09130 PF08659 KR domain CD007_09130 PF14765 Polyketide synthase dehydratase CD007_09130 PF16197 CD007_09130 CD007_09135 PF00109 Beta-ketoacyl synthase, N-terminal domain CD007_09135 PF00550 Phosphopantetheine attachment site CD007_09135 PF02801 Beta-ketoacyl synthase, C-terminal domain CD007_09135 PF08242 Methyltransferase domain CD007_09135 PF08659 KR domain CD007_09135 PF14765 Polyketide synthase dehydratase CD007_09135 PF16197 CD007_09135 CD007_09140 PF00109 Beta-ketoacyl synthase, N-terminal domain CD007_09140 PF00501 AMP-binding enzyme CD007_09140 PF00550 Phosphopantetheine attachment site CD007_09140 PF00668 Condensation domain CD007_09140 PF02801 Beta-ketoacyl synthase, C-terminal domain CD007_09140 PF08659 KR domain CD007_09140 PF13193 AMP-binding enzyme C-terminal domain CD007_09140 PF14765 Polyketide synthase dehydratase CD007_09140 PF16197 CD007_09140 CD007_09145 PF00109 Beta-ketoacyl synthase, N-terminal domain CD007_09145 PF00550 Phosphopantetheine attachment site CD007_09145 PF00975 Thioesterase domain CD007_09145 PF02801 Beta-ketoacyl synthase, C-terminal domain CD007_09145 PF08242 Methyltransferase domain CD007_09145 PF14765 Polyketide synthase dehydratase CD007_09145 PF16197 CD007_09145 CD007_09150 PF00067 Cytochrome P450 CD007_09165 PF00082 Subtilase family CD007_09175 PF05908 Protein of unknown function (DUF867) CD007_09180 PF02566 OsmC-like protein CD007_09185 PF00893 Small Multidrug Resistance protein CD007_09190 PF00893 Small Multidrug Resistance protein CD007_09200 PF12788 CD007_09200 CD007_09205 PF01715 IPP transferase CD007_09210 PF17209 CD007_09210 CD007_09215 PF14157 YmzC-like protein CD007_09225 PF07972 NrdI Flavodoxin like CD007_09230 PF00317 Ribonucleotide reductase, all-alpha domain CD007_09230 PF02867 Ribonucleotide reductase, barrel domain CD007_09230 PF08343 Ribonucleotide reductase N-terminal CD007_09235 PF00268 Ribonucleotide reductase, small chain CD007_09245 PF01520 N-acetylmuramoyl-L-alanine amidase CD007_09245 PF05036 Sporulation related domain CD007_09255 PF00004 ATPase family associated with various cellular activities (AAA) CD007_09260 PF01926 50S ribosome-binding GTPase CD007_09260 PF13167 CD007_09260 CD007_09260 PF16360 CD007_09260 CD007_09265 PF06838 Methionine gamma-lyase CD007_09270 PF13411 MerR HTH family regulatory protein CD007_09275 PF00120 Glutamine synthetase, catalytic domain CD007_09275 PF03951 Glutamine synthetase, beta-Grasp domain CD007_09300 PF14568 SMI1-KNR4 cell-wall CD007_09310 PF13302 Acetyltransferase (GNAT) domain CD007_09320 PF13021 CD007_09320 CD007_09345 PF13347 MFS/sugar transport protein CD007_09350 PF04616 Glycosyl hydrolases family 43 CD007_09355 PF00480 ROK family CD007_09355 PF13412 Winged helix-turn-helix DNA-binding CD007_09360 PF01261 Xylose isomerase-like TIM barrel CD007_09365 PF00370 FGGY family of carbohydrate kinases, N-terminal domain CD007_09365 PF02782 FGGY family of carbohydrate kinases, C-terminal domain CD007_09380 PF00083 Sugar (and other) transporter CD007_09385 PF00842 Alanine racemase, C-terminal domain CD007_09385 PF01168 Alanine racemase, N-terminal domain CD007_09395 PF10903 CD007_09395 CD007_09400 PF00692 dUTPase CD007_09410 PF00303 Thymidylate synthase CD007_09420 PF15493 Domain of unknown function, YrpD CD007_09425 PF14037 CD007_09425 CD007_09435 PF02416 mttA/Hcf106 family CD007_09445 PF08327 Activator of Hsp90 ATPase homolog 1-like protein CD007_09455 PF03323 CD007_09455 CD007_09460 PF03845 CD007_09460 CD007_09465 PF05504 Spore germination B3/ GerAC like, C-terminal CD007_09475 PF13761 CD007_09475 CD007_09480 PF14158 CD007_09480 CD007_09490 PF05908 Protein of unknown function (DUF867) CD007_09495 PF10710 CD007_09495 CD007_09500 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CD007_09510 PF00717 Peptidase S24-like CD007_09510 PF01726 LexA DNA binding domain CD007_09515 PF01476 LysM domain CD007_09520 PF00239 Resolvase, N terminal domain CD007_09525 PF05979 Bacterial protein of unknown function (DUF896) CD007_09530 PF00456 Transketolase, thiamine diphosphate binding domain CD007_09530 PF02779 Transketolase, pyrimidine binding domain CD007_09530 PF02780 Transketolase, C-terminal domain CD007_09535 PF10747 Protein of unknown function (DUF2522) CD007_09540 PF03672 CD007_09540 CD007_09545 PF09388 Spo0E like sporulation regulatory protein CD007_09550 PF02683 CD007_09550 CD007_09555 PF00072 Response regulator receiver domain CD007_09560 PF07301 CD007_09560 CD007_09565 PF11084 CD007_09565 CD007_09575 PF08179 CD007_09575 CD007_09580 PF08175 CD007_09580 CD007_09585 PF00330 Aconitase family (aconitate hydratase) CD007_09585 PF00694 Aconitase C-terminal domain CD007_09590 PF00578 AhpC/TSA family CD007_09595 PF13040 CD007_09595 CD007_09600 PF08177 CD007_09600 CD007_09610 PF03061 Thioesterase superfamily CD007_09620 PF01521 Iron-sulphur cluster biosynthesis CD007_09625 PF02660 CD007_09625 CD007_09630 PF13380 CoA binding domain CD007_09635 PF00204 DNA gyrase B CD007_09635 PF00986 DNA gyrase B subunit, carboxyl terminus CD007_09635 PF01751 Toprim domain CD007_09635 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CD007_09640 PF00521 DNA gyrase/topoisomerase IV, subunit A CD007_09640 PF03989 DNA gyrase C-terminal domain, beta-propeller CD007_09650 PF01235 CD007_09650 CD007_09655 PF00150 Cellulase (glycosyl hydrolase family 5) CD007_09655 PF00942 Cellulose binding domain CD007_09660 PF17452 CD007_09660 CD007_09665 PF02055 O-Glycosyl hydrolase family 30 CD007_09665 PF17189 CD007_09665 CD007_09670 PF03422 Carbohydrate binding module (family 6) CD007_09670 PF04616 Glycosyl hydrolases family 43 CD007_09675 PF04138 CD007_09675 CD007_09680 PF00483 Nucleotidyl transferase CD007_09685 PF09335 CD007_09685 CD007_09695 PF01039 Carboxyl transferase domain CD007_09700 PF00378 Enoyl-CoA hydratase/isomerase family CD007_09705 PF00682 HMGL-like CD007_09710 PF00364 Biotin-requiring enzyme CD007_09715 PF00289 Carbamoyl-phosphate synthase L chain, N-terminal domain CD007_09715 PF02785 Biotin carboxylase C-terminal domain CD007_09715 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain CD007_09720 PF00501 AMP-binding enzyme CD007_09720 PF13193 AMP-binding enzyme C-terminal domain CD007_09725 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CD007_09725 PF02770 Acyl-CoA dehydrogenase, middle domain CD007_09725 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CD007_09730 PF17329 CD007_09730 CD007_09735 PF02638 CD007_09735 CD007_09740 PF07098 CD007_09740 CD007_09745 PF00501 AMP-binding enzyme CD007_09745 PF00550 Phosphopantetheine attachment site CD007_09745 PF00668 Condensation domain CD007_09745 PF00975 Thioesterase domain CD007_09745 PF13193 AMP-binding enzyme C-terminal domain CD007_09750 PF00501 AMP-binding enzyme CD007_09750 PF00550 Phosphopantetheine attachment site CD007_09750 PF00668 Condensation domain CD007_09750 PF13193 AMP-binding enzyme C-terminal domain CD007_09755 PF00501 AMP-binding enzyme CD007_09755 PF00550 Phosphopantetheine attachment site CD007_09755 PF00668 Condensation domain CD007_09755 PF13193 AMP-binding enzyme C-terminal domain CD007_09760 PF00501 AMP-binding enzyme CD007_09760 PF00550 Phosphopantetheine attachment site CD007_09760 PF00668 Condensation domain CD007_09760 PF13193 AMP-binding enzyme C-terminal domain CD007_09765 PF00501 AMP-binding enzyme CD007_09765 PF00550 Phosphopantetheine attachment site CD007_09765 PF00668 Condensation domain CD007_09765 PF13193 AMP-binding enzyme C-terminal domain CD007_09770 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family CD007_09775 PF01263 Aldose 1-epimerase CD007_09780 PF01554 MatE CD007_09785 PF16800 CD007_09785 CD007_09795 PF00589 Phage integrase family CD007_09800 PF12728 Helix-turn-helix domain CD007_09805 PF01019 Gamma-glutamyltranspeptidase CD007_09810 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CD007_09810 PF03466 LysR substrate binding domain CD007_09820 PF07992 Pyridine nucleotide-disulphide oxidoreductase CD007_09820 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster CD007_09825 PF00310 Glutamine amidotransferases class-II CD007_09825 PF01493 GXGXG motif CD007_09825 PF01645 Conserved region in glutamate synthase CD007_09825 PF04898 Glutamate synthase central domain CD007_09830 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CD007_09830 PF03466 LysR substrate binding domain CD007_09835 PF00696 Amino acid kinase family CD007_09835 PF01472 PUA domain CD007_09840 PF03807 NADP oxidoreductase coenzyme F420-dependent CD007_09840 PF14748 Pyrroline-5-carboxylate reductase dimerisation CD007_09845 PF02334 Replication terminator protein CD007_09850 PF00106 short chain dehydrogenase CD007_09855 PF06103 CD007_09855 CD007_09865 PF13302 Acetyltransferase (GNAT) domain CD007_09870 PF01061 CD007_09870 CD007_09875 PF01061 CD007_09875 CD007_09880 PF00005 ABC transporter CD007_09885 PF12802 MarR family CD007_09890 PF07690 Major Facilitator Superfamily CD007_09895 PF00370 FGGY family of carbohydrate kinases, N-terminal domain CD007_09895 PF02782 FGGY family of carbohydrate kinases, C-terminal domain CD007_09900 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CD007_09900 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CD007_09905 PF00384 Molybdopterin oxidoreductase CD007_09905 PF01568 Molydopterin dinucleotide binding domain CD007_09905 PF04879 Molybdopterin oxidoreductase Fe4S4 domain CD007_09915 PF00083 Sugar (and other) transporter CD007_09920 PF01408 Oxidoreductase family, NAD-binding Rossmann fold CD007_09920 PF02894 Oxidoreductase family, C-terminal alpha/beta domain CD007_09925 PF01261 Xylose isomerase-like TIM barrel CD007_09930 PF00356 Bacterial regulatory proteins, lacI family CD007_09930 PF13377 Periplasmic binding protein-like domain CD007_09945 PF13217 CD007_09945 CD007_09950 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CD007_09950 PF00672 HAMP domain CD007_09950 PF05227 CHASE3 domain CD007_09955 PF03241 4-hydroxyphenylacetate 3-hydroxylase C terminal CD007_09955 PF11794 4-hydroxyphenylacetate 3-hydroxylase N terminal CD007_09960 PF03330 Rare lipoprotein A (RlpA)-like double-psi beta-barrel CD007_09965 PF06912 CD007_09965 CD007_09970 PF00544 Pectate lyase CD007_09975 PF02586 Uncharacterised ACR, COG2135 CD007_09985 PF00190 Cupin CD007_09990 PF16302 CD007_09990 CD007_10005 PF04294 CD007_10005 CD007_10010 PF11188 CD007_10010 CD007_10020 PF05675 CD007_10020 CD007_10025 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CD007_10025 PF03466 LysR substrate binding domain CD007_10030 PF00892 EamA-like transporter family CD007_10040 PF01965 DJ-1/PfpI family CD007_10045 PF13354 Beta-lactamase enzyme family CD007_10050 PF11518 Protein of unknown function (DUF3221) CD007_10070 PF00391 PEP-utilising enzyme, mobile domain CD007_10070 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain CD007_10075 PF00457 Glycosyl hydrolases family 11 CD007_10085 PF05154 CD007_10085 CD007_10115 PF13443 Cro/C1-type HTH DNA-binding domain CD007_10150 PF14037 CD007_10150 CD007_10160 PF13424 Tetratricopeptide repeat CD007_10180 PF09346 SMI1 / KNR4 family (SUKH-1) CD007_10185 PF01593 Flavin containing amine oxidoreductase CD007_10190 PF01588 Putative tRNA binding domain CD007_10195 PF07883 Cupin domain CD007_10195 PF12833 Helix-turn-helix domain CD007_10200 PF00583 Acetyltransferase (GNAT) family CD007_10205 PF00440 Bacterial regulatory proteins, tetR family CD007_10205 PF13305 WHG domain CD007_10210 PF00753 Metallo-beta-lactamase superfamily CD007_10215 PF06445 GyrI-like small molecule binding domain CD007_10220 PF08279 HTH domain CD007_10220 PF13280 CD007_10220 CD007_10230 PF01022 Bacterial regulatory protein, arsR family CD007_10235 PF13702 Lysozyme-like CD007_10240 PF04238 CD007_10240 CD007_10255 PF02016 LD-carboxypeptidase CD007_10260 PF00487 CD007_10260 CD007_10265 PF07730 Histidine kinase CD007_10270 PF00072 Response regulator receiver domain CD007_10270 PF00196 Bacterial regulatory proteins, luxR family CD007_10275 PF01476 LysM domain CD007_10275 PF06725 3D domain CD007_10280 PF00270 DEAD/DEAH box helicase CD007_10280 PF00271 Helicase conserved C-terminal domain CD007_10280 PF00570 HRDC domain CD007_10280 PF09382 RQC domain CD007_10280 PF16124 CD007_10280 CD007_10295 PF02525 Flavodoxin-like fold CD007_10300 PF01258 Prokaryotic dksA/traR C4-type zinc finger CD007_10315 PF00011 Hsp20/alpha crystallin family CD007_10330 PF08000 Bacterial PH domain CD007_10340 PF00171 Aldehyde dehydrogenase family CD007_10345 PF13243 Prenyltransferase-like CD007_10345 PF13249 Prenyltransferase-like CD007_10350 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain CD007_10350 PF02777 Iron/manganese superoxide dismutases, C-terminal domain CD007_10355 PF00209 Sodium:neurotransmitter symporter family CD007_10360 PF01758 Sodium Bile acid symporter family CD007_10365 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) CD007_10365 PF00364 Biotin-requiring enzyme CD007_10365 PF02817 e3 binding domain CD007_10370 PF00676 Dehydrogenase E1 component CD007_10370 PF02779 Transketolase, pyrimidine binding domain CD007_10370 PF16078 CD007_10370 CD007_10370 PF16870 CD007_10370 CD007_10375 PF00092 von Willebrand factor type A domain CD007_10380 PF07728 AAA domain (dynein-related subfamily) CD007_10385 PF00080 Copper/zinc superoxide dismutase (SODC) CD007_10390 PF00877 NlpC/P60 family CD007_10390 PF01476 LysM domain CD007_10395 PF04101 Glycosyltransferase family 28 C-terminal domain CD007_10400 PF02457 DisA bacterial checkpoint controller nucleotide-binding CD007_10400 PF10372 Bacterial membrane-spanning protein N-terminus CD007_10405 PF01554 MatE CD007_10410 PF01740 STAS domain CD007_10415 PF02585 GlcNAc-PI de-N-acetylase CD007_10420 PF08830 Protein of unknown function (DUF1806) CD007_10430 PF00892 EamA-like transporter family CD007_10445 PF02447 CD007_10445 CD007_10450 PF14552 Tautomerase enzyme CD007_10455 PF01638 HxlR-like helix-turn-helix CD007_10460 PF00881 Nitroreductase family CD007_10465 PF01738 Dienelactone hydrolase family CD007_10470 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CD007_10475 PF11755 CD007_10475 CD007_10480 PF00474 Sodium:solute symporter family CD007_10485 PF00595 PDZ domain (Also known as DHR or GLGF) CD007_10485 PF01471 Putative peptidoglycan binding domain CD007_10485 PF03572 Peptidase family S41 CD007_10490 PF08241 Methyltransferase domain CD007_10500 PF02557 D-alanyl-D-alanine carboxypeptidase CD007_10505 PF01048 Phosphorylase superfamily CD007_10515 PF14191 CD007_10515 CD007_10520 PF01569 PAP2 superfamily CD007_10525 PF14162 CD007_10525 CD007_10540 PF06855 Protein of unknown function (DUF1250) CD007_10545 PF14122 CD007_10545 CD007_10550 PF12544 Lysine-2,3-aminomutase CD007_10555 PF00583 Acetyltransferase (GNAT) family CD007_10560 PF01546 Peptidase family M20/M25/M40 CD007_10560 PF07687 Peptidase dimerisation domain CD007_10565 PF01144 Coenzyme A transferase CD007_10570 PF01144 Coenzyme A transferase CD007_10575 PF00202 Aminotransferase class-III CD007_10580 PF09680 CD007_10580 CD007_10585 PF00583 Acetyltransferase (GNAT) family CD007_10590 PF00535 Glycosyl transferase family 2 CD007_10605 PF12996 CD007_10605 CD007_10605 PF13524 Glycosyl transferases group 1 CD007_10610 PF02333 Phytase CD007_10615 PF02719 Polysaccharide biosynthesis protein CD007_10620 PF01641 SelR domain CD007_10625 PF01625 Peptide methionine sulfoxide reductase CD007_10630 PF01047 MarR family CD007_10635 PF01554 MatE CD007_10640 PF17431 CD007_10640 CD007_10645 PF09911 CD007_10645 CD007_10650 PF13472 GDSL-like Lipase/Acylhydrolase family CD007_10655 PF02630 SCO1/SenC CD007_10660 PF10751 CD007_10660 CD007_10665 PF00291 Pyridoxal-phosphate dependent enzyme CD007_10665 PF00585 C-terminal regulatory domain of Threonine dehydratase CD007_10670 PF00158 Sigma-54 interaction domain CD007_10670 PF08461 Ribonuclease R winged-helix domain CD007_10675 PF03006 CD007_10675 CD007_10685 PF00186 Dihydrofolate reductase CD007_10690 PF04608 Phosphatidylglycerophosphatase A CD007_10695 PF14005 CD007_10695 CD007_10700 PF04445 Putative SAM-dependent methyltransferase CD007_10705 PF06491 Disulphide isomerase CD007_10710 PF00920 Dehydratase family CD007_10715 PF08712 Scaffold protein Nfu/NifU N terminal CD007_10715 PF13646 HEAT repeats CD007_10715 PF13769 CD007_10715 CD007_10720 PF01966 HD domain CD007_10725 PF00255 Glutathione peroxidase CD007_10730 PF04204 Homoserine O-succinyltransferase CD007_10735 PF00534 Glycosyl transferases group 1 CD007_10735 PF06925 CD007_10735 CD007_10740 PF00313 'Cold-shock' DNA-binding domain CD007_10750 PF10819 CD007_10750 CD007_10755 PF10782 CD007_10755 CD007_10760 PF13456 Reverse transcriptase-like CD007_10765 PF02592 CD007_10765 CD007_10770 PF13456 Reverse transcriptase-like CD007_10780 PF01367 5'-3' exonuclease, C-terminal SAM fold CD007_10780 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain CD007_10790 PF10752 CD007_10790 CD007_10795 PF00350 Dynamin family CD007_10800 PF04140 Isoprenylcysteine carboxyl methyltransferase (ICMT) family CD007_10805 PF00195 Chalcone and stilbene synthases, N-terminal domain CD007_10805 PF02797 Chalcone and stilbene synthases, C-terminal domain CD007_10810 PF00860 Permease family CD007_10815 PF00156 Phosphoribosyl transferase domain CD007_10820 PF02074 Carboxypeptidase Taq (M32) metallopeptidase CD007_10825 PF03812 CD007_10825 CD007_10830 PF01081 KDPG and KHG aldolase CD007_10835 PF00294 pfkB family carbohydrate kinase CD007_10840 PF00356 Bacterial regulatory proteins, lacI family CD007_10840 PF13377 Periplasmic binding protein-like domain CD007_10845 PF04962 KduI/IolB family CD007_10850 PF13561 Enoyl-(Acyl carrier protein) reductase CD007_10855 PF13307 Helicase C-terminal domain CD007_10865 PF14139 CD007_10865 CD007_10870 PF01170 Putative RNA methylase family UPF0020 CD007_10870 PF02926 THUMP domain CD007_10880 PF05103 DivIVA protein CD007_10885 PF06908 Protein of unknown function (DUF1273) CD007_10890 PF11122 CD007_10890 CD007_10895 PF13482 RNase_H superfamily CD007_10900 PF00270 DEAD/DEAH box helicase CD007_10900 PF00271 Helicase conserved C-terminal domain CD007_10900 PF09369 CD007_10900 CD007_10905 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 CD007_10915 PF14179 CD007_10915 CD007_10920 PF14178 CD007_10920 CD007_10925 PF08807 Bacterial domain of unknown function (DUF1798) CD007_10930 PF17522 CD007_10930 CD007_10940 PF10720 CD007_10940 CD007_10945 PF03838 Recombination protein U CD007_10950 PF00905 Penicillin binding protein transpeptidase domain CD007_10950 PF00912 Transglycosylase CD007_10960 PF00633 Helix-hairpin-helix motif CD007_10960 PF00730 HhH-GPD superfamily base excision DNA repair protein CD007_10960 PF10576 Iron-sulfur binding domain of endonuclease III CD007_10965 PF07261 Replication initiation and membrane attachment CD007_10970 PF00152 tRNA synthetases class II (D, K and N) CD007_10970 PF01336 OB-fold nucleic acid binding domain CD007_10975 PF00155 Aminotransferase class I and II CD007_10980 PF03413 Peptidase propeptide and YPEB domain CD007_10985 PF14084 CD007_10985 CD007_10990 PF00929 Exonuclease CD007_10990 PF04851 Type III restriction enzyme, res subunit CD007_10990 PF13307 Helicase C-terminal domain CD007_10995 PF02261 Aspartate decarboxylase CD007_11000 PF02569 Pantoate-beta-alanine ligase CD007_11005 PF02548 Ketopantoate hydroxymethyltransferase CD007_11010 PF02237 Biotin protein ligase C terminal domain CD007_11010 PF03099 Biotin/lipoate A/B protein ligase family CD007_11010 PF08279 HTH domain CD007_11015 PF01743 Poly A polymerase head domain CD007_11015 PF12627 Probable RNA and SrmB- binding site of polymerase A CD007_11015 PF13735 tRNA nucleotidyltransferase domain 2 putative CD007_11020 PF00534 Glycosyl transferases group 1 CD007_11020 PF13439 Glycosyltransferase Family 4 CD007_11025 PF02585 GlcNAc-PI de-N-acetylase CD007_11030 PF02142 MGS-like domain CD007_11035 PF01113 Dihydrodipicolinate reductase, N-terminus CD007_11035 PF05173 Dihydrodipicolinate reductase, C-terminus CD007_11040 PF03819 MazG nucleotide pyrophosphohydrolase domain CD007_11045 PF02588 CD007_11045 CD007_11045 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) CD007_11050 PF09577 CD007_11050 CD007_11055 PF07187 CD007_11055 CD007_11060 PF00032 Cytochrome b(C-terminal)/b6/petD CD007_11060 PF13442 Cytochrome C oxidase, cbb3-type, subunit III CD007_11065 PF00033 Cytochrome b(N-terminal)/b6/petB CD007_11070 PF00355 Rieske [2Fe-2S] domain CD007_11070 PF08802 Cytochrome B6-F complex Fe-S subunit CD007_11075 PF10673 CD007_11075 CD007_11080 PF08858 IDEAL domain CD007_11080 PF08864 UPF0302 domain CD007_11085 PF13429 Tetratricopeptide repeat CD007_11085 PF13432 Tetratricopeptide repeat CD007_11085 PF14559 Tetratricopeptide repeat CD007_11090 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) CD007_11095 PF01842 ACT domain CD007_11095 PF02153 Prephenate dehydrogenase CD007_11100 PF00155 Aminotransferase class I and II CD007_11105 PF00290 Tryptophan synthase alpha chain CD007_11110 PF00291 Pyridoxal-phosphate dependent enzyme CD007_11115 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase CD007_11120 PF00218 Indole-3-glycerol phosphate synthase CD007_11125 PF00591 Glycosyl transferase family, a/b domain CD007_11125 PF02885 Glycosyl transferase family, helical bundle domain CD007_11130 PF00425 chorismate binding enzyme CD007_11130 PF04715 Anthranilate synthase component I, N terminal region CD007_11135 PF07736 Chorismate mutase type I CD007_11140 PF01761 3-dehydroquinate synthase CD007_11145 PF01264 Chorismate synthase CD007_11150 PF01739 CheR methyltransferase, SAM binding domain CD007_11150 PF03705 CheR methyltransferase, all-alpha domain CD007_11155 PF00334 Nucleoside diphosphate kinase CD007_11160 PF00348 Polyprenyl synthetase CD007_11165 PF01209 ubiE/COQ5 methyltransferase family CD007_11170 PF07307 CD007_11170 CD007_11175 PF02081 Tryptophan RNA-binding attenuator protein CD007_11180 PF01227 GTP cyclohydrolase I CD007_11185 PF00216 Bacterial DNA-binding protein CD007_11190 PF09547 CD007_11190 CD007_11200 PF10966 CD007_11200 CD007_11205 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus CD007_11205 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus CD007_11210 PF01926 50S ribosome-binding GTPase CD007_11210 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal CD007_11220 PF14045 CD007_11220 CD007_11230 PF14140 CD007_11230 CD007_11235 PF01070 FMN-dependent dehydrogenase CD007_11240 PF00575 S1 RNA binding domain CD007_11245 PF02224 Cytidylate kinase CD007_11250 PF17313 CD007_11250 CD007_11255 PF07238 PilZ domain CD007_11255 PF12945 Flagellar protein YcgR CD007_11260 PF03413 Peptidase propeptide and YPEB domain CD007_11260 PF14620 CD007_11260 CD007_11265 PF01471 Putative peptidoglycan binding domain CD007_11265 PF07486 Cell Wall Hydrolase CD007_11270 PF13367 CD007_11270 CD007_11275 PF13738 Pyridine nucleotide-disulphide oxidoreductase CD007_11280 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase CD007_11280 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain CD007_11285 PF05389 Negative regulator of genetic competence (MecA) CD007_11290 PF00149 Calcineurin-like phosphoesterase CD007_11295 PF10864 CD007_11295 CD007_11300 PF01476 LysM domain CD007_11305 PF02517 CAAX protease self-immunity CD007_11310 PF00270 DEAD/DEAH box helicase CD007_11310 PF00271 Helicase conserved C-terminal domain CD007_11315 PF14493 CD007_11315 CD007_11320 PF13370 4Fe-4S single cluster domain CD007_11325 PF12822 Protein of unknown function (DUF3816) CD007_11330 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CD007_11330 PF01842 ACT domain CD007_11330 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CD007_11335 PF01487 Type I 3-dehydroquinase CD007_11340 PF10646 CD007_11340 CD007_11345 PF04542 Sigma-70 region 2 CD007_11345 PF08281 Sigma-70, region 4 CD007_11350 PF00512 His Kinase A (phospho-acceptor) domain CD007_11350 PF00672 HAMP domain CD007_11350 PF00989 PAS fold CD007_11350 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CD007_11355 PF00072 Response regulator receiver domain CD007_11355 PF00486 Transcriptional regulatory protein, C terminal CD007_11360 PF01578 CD007_11360 CD007_11365 PF05140 CD007_11365 CD007_11370 PF00578 AhpC/TSA family CD007_11375 PF00849 RNA pseudouridylate synthase CD007_11375 PF01479 S4 domain CD007_11380 PF07670 Nucleoside recognition CD007_11385 PF07670 Nucleoside recognition CD007_11390 PF00768 D-alanyl-D-alanine carboxypeptidase CD007_11390 PF07943 Penicillin-binding protein 5, C-terminal domain CD007_11395 PF13047 CD007_11395 CD007_11400 PF04079 Putative transcriptional regulators (Ypuh-like) CD007_11405 PF02616 ScpA/B protein CD007_11410 PF03745 Domain of unknown function (DUF309) CD007_11415 PF00583 Acetyltransferase (GNAT) family CD007_11420 PF00885 6,7-dimethyl-8-ribityllumazine synthase CD007_11425 PF00925 GTP cyclohydrolase II CD007_11425 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase CD007_11430 PF00677 Lumazine binding domain CD007_11435 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region CD007_11435 PF01872 RibD C-terminal domain CD007_11445 PF00717 Peptidase S24-like CD007_11460 PF10676 CD007_11460 CD007_11465 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD CD007_11475 PF06207 CD007_11475 CD007_11480 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain CD007_11480 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain CD007_11485 PF03323 CD007_11485 CD007_11490 PF14097 CD007_11490 CD007_11495 PF03862 CD007_11495 CD007_11500 PF07451 Stage V sporulation protein AD (SpoVAD) CD007_11505 PF03862 CD007_11505 CD007_11510 PF13782 CD007_11510 CD007_11515 PF12164 Stage V sporulation protein AA CD007_11520 PF04539 Sigma-70 region 3 CD007_11520 PF04542 Sigma-70 region 2 CD007_11520 PF04545 Sigma-70, region 4 CD007_11525 PF13581 Histidine kinase-like ATPase domain CD007_11530 PF01740 STAS domain CD007_11535 PF00768 D-alanyl-D-alanine carboxypeptidase CD007_11535 PF07943 Penicillin-binding protein 5, C-terminal domain CD007_11540 PF01048 Phosphorylase superfamily CD007_11545 PF01676 Metalloenzyme superfamily CD007_11550 PF00589 Phage integrase family CD007_11550 PF02899 Phage integrase, N-terminal SAM-like domain CD007_11555 PF14004 CD007_11555 CD007_11560 PF01475 Ferric uptake regulator family CD007_11565 PF01944 CD007_11565 CD007_11575 PF00390 Malic enzyme, N-terminal domain CD007_11575 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CD007_11575 PF03949 Malic enzyme, NAD binding domain CD007_11580 PF03553 CD007_11580 CD007_11585 PF00206 Lyase CD007_11585 PF10415 Fumarase C C-terminus CD007_11590 PF00710 Asparaginase CD007_11595 PF01381 Helix-turn-helix CD007_11600 PF13263 PHP-associated CD007_11605 PF00293 NUDIX domain CD007_11610 PF13072 CD007_11610 CD007_11615 PF00248 Aldo/keto reductase family CD007_11620 PF13025 CD007_11620 CD007_11625 PF12146 Putative lysophospholipase CD007_11630 PF10827 CD007_11630 CD007_11635 PF01521 Iron-sulphur cluster biosynthesis CD007_11640 PF04229 GrpB protein CD007_11640 PF13673 Acetyltransferase (GNAT) domain CD007_11645 PF03992 Antibiotic biosynthesis monooxygenase CD007_11650 PF00583 Acetyltransferase (GNAT) family CD007_11655 PF08863 CD007_11655 CD007_11660 PF00817 impB/mucB/samB family CD007_11660 PF11799 impB/mucB/samB family C-terminal domain CD007_11665 PF14164 CD007_11665 CD007_11670 PF07690 Major Facilitator Superfamily CD007_11680 PF13669 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CD007_11685 PF00485 Phosphoribulokinase / Uridine kinase family CD007_11690 PF00291 Pyridoxal-phosphate dependent enzyme CD007_11695 PF00106 short chain dehydrogenase CD007_11700 PF00753 Metallo-beta-lactamase superfamily CD007_11705 PF03807 NADP oxidoreductase coenzyme F420-dependent CD007_11705 PF14748 Pyrroline-5-carboxylate reductase dimerisation CD007_11710 PF01546 Peptidase family M20/M25/M40 CD007_11715 PF00724 NADH:flavin oxidoreductase / NADH oxidase family CD007_11720 PF12146 Putative lysophospholipase CD007_11725 PF00471 Ribosomal protein L33 CD007_11730 PF12706 Beta-lactamase superfamily domain CD007_11735 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain CD007_11735 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain CD007_11740 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain CD007_11740 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase CD007_11745 PF00817 impB/mucB/samB family CD007_11745 PF11798 IMS family HHH motif CD007_11745 PF11799 impB/mucB/samB family C-terminal domain CD007_11755 PF02096 60Kd inner membrane protein CD007_11760 PF09844 CD007_11760 CD007_11765 PF01546 Peptidase family M20/M25/M40 CD007_11765 PF07687 Peptidase dimerisation domain CD007_11770 PF01039 Carboxyl transferase domain CD007_11775 PF13669 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CD007_11780 PF03734 L,D-transpeptidase catalytic domain CD007_11785 PF06081 CD007_11785 CD007_11785 PF11728 DUF939 C-terminal domain CD007_11790 PF00005 ABC transporter CD007_11795 PF00528 Binding-protein-dependent transport system inner membrane component CD007_11800 PF00497 Bacterial extracellular solute-binding proteins, family 3 CD007_11805 PF06491 Disulphide isomerase CD007_11810 PF00781 Diacylglycerol kinase catalytic domain CD007_11815 PF07690 Major Facilitator Superfamily CD007_11820 PF06445 GyrI-like small molecule binding domain CD007_11820 PF13411 MerR HTH family regulatory protein CD007_11825 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) CD007_11825 PF00364 Biotin-requiring enzyme CD007_11825 PF02817 e3 binding domain CD007_11830 PF02779 Transketolase, pyrimidine binding domain CD007_11830 PF02780 Transketolase, C-terminal domain CD007_11835 PF00676 Dehydrogenase E1 component CD007_11840 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CD007_11840 PF07992 Pyridine nucleotide-disulphide oxidoreductase CD007_11845 PF00871 Acetokinase family CD007_11850 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase CD007_11850 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain CD007_11855 PF01515 Phosphate acetyl/butaryl transferase CD007_11860 PF00158 Sigma-54 interaction domain CD007_11860 PF00989 PAS fold CD007_11860 PF02954 Bacterial regulatory protein, Fis family CD007_11865 PF11118 CD007_11865 CD007_11870 PF13714 Phosphoenolpyruvate phosphomutase CD007_11875 PF03972 MmgE/PrpD family CD007_11880 PF00285 Citrate synthase CD007_11885 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CD007_11885 PF02770 Acyl-CoA dehydrogenase, middle domain CD007_11885 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CD007_11890 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain CD007_11890 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain CD007_11895 PF00108 Thiolase, N-terminal domain CD007_11895 PF02803 Thiolase, C-terminal domain CD007_11900 PF03009 Glycerophosphoryl diester phosphodiesterase family CD007_11905 PF01520 N-acetylmuramoyl-L-alanine amidase CD007_11915 PF00724 NADH:flavin oxidoreductase / NADH oxidase family CD007_11920 PF00072 Response regulator receiver domain CD007_11920 PF08769 Sporulation initiation factor Spo0A C terminal CD007_11925 PF00595 PDZ domain (Also known as DHR or GLGF) CD007_11925 PF05580 CD007_11925 CD007_11930 PF13476 AAA domain CD007_11935 PF01316 Arginine repressor, DNA binding domain CD007_11935 PF02863 Arginine repressor, C-terminal domain CD007_11940 PF01479 S4 domain CD007_11940 PF01728 FtsJ-like methyltransferase CD007_11945 PF02779 Transketolase, pyrimidine binding domain CD007_11945 PF02780 Transketolase, C-terminal domain CD007_11945 PF13292 1-deoxy-D-xylulose-5-phosphate synthase CD007_11950 PF00348 Polyprenyl synthetase CD007_11955 PF02609 Exonuclease VII small subunit CD007_11960 PF02601 CD007_11960 CD007_11960 PF13742 CD007_11960 CD007_11965 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain CD007_11965 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain CD007_11970 PF01029 NusB family CD007_11975 PF03780 CD007_11975 CD007_11980 PF00289 Carbamoyl-phosphate synthase L chain, N-terminal domain CD007_11980 PF02785 Biotin carboxylase C-terminal domain CD007_11980 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain CD007_11985 PF00364 Biotin-requiring enzyme CD007_11990 PF12685 SpoIIIAH-like protein CD007_12000 PF09581 CD007_12000 CD007_12005 PF09546 CD007_12005 CD007_12010 PF06686 CD007_12010 CD007_12015 PF06686 CD007_12015 CD007_12020 PF09548 CD007_12020 CD007_12030 PF10942 CD007_12030 CD007_12035 PF01132 Elongation factor P (EF-P) OB domain CD007_12035 PF08207 Elongation factor P (EF-P) KOW-like domain CD007_12035 PF09285 Elongation factor P, C-terminal CD007_12040 PF00557 Metallopeptidase family M24 CD007_12040 PF01321 Creatinase/Prolidase N-terminal domain CD007_12045 PF01220 Dehydroquinase class II CD007_12050 PF11085 CD007_12050 CD007_12055 PF07136 CD007_12055 CD007_12065 PF01734 Patatin-like phospholipase CD007_12070 PF01325 Iron dependent repressor, N-terminal DNA binding domain CD007_12070 PF02742 Iron dependent repressor, metal binding and dimerisation domain CD007_12075 PF03099 Biotin/lipoate A/B protein ligase family CD007_12080 PF00581 Rhodanese-like domain CD007_12085 PF02347 Glycine cleavage system P-protein CD007_12090 PF02347 Glycine cleavage system P-protein CD007_12095 PF01571 Aminomethyltransferase folate-binding domain CD007_12095 PF08669 Glycine cleavage T-protein C-terminal barrel domain CD007_12100 PF00176 SNF2 family N-terminal domain CD007_12100 PF00271 Helicase conserved C-terminal domain CD007_12105 PF11079 CD007_12105 CD007_12110 PF08671 Anti-repressor SinI CD007_12115 PF01381 Helix-turn-helix CD007_12115 PF08671 Anti-repressor SinI CD007_12120 PF12389 CD007_12120 CD007_12125 PF00717 Peptidase S24-like CD007_12135 PF13028 Protein of unknown function (DUF3889) CD007_12140 PF14038 CD007_12140 CD007_12145 PF14173 CD007_12145 CD007_12150 PF15980 CD007_12150 CD007_12160 PF07963 Prokaryotic N-terminal methylation motif CD007_12165 PF07963 Prokaryotic N-terminal methylation motif CD007_12170 PF00482 Type II secretion system (T2SS), protein F CD007_12175 PF00437 Type II/IV secretion system protein CD007_12185 PF01544 CorA-like Mg2+ transporter protein CD007_12190 PF00571 CBS domain CD007_12190 PF01595 CD007_12190 CD007_12190 PF03471 Transporter associated domain CD007_12195 PF01740 STAS domain CD007_12195 PF14361 CD007_12195 CD007_12205 PF03960 ArsC family CD007_12210 PF11117 CD007_12210 CD007_12215 PF00753 Metallo-beta-lactamase superfamily CD007_12220 PF10958 CD007_12220 CD007_12225 PF01910 Domain of unknown function DUF77 CD007_12235 PF00246 Zinc carboxypeptidase CD007_12240 PF00884 Sulfatase CD007_12245 PF00480 ROK family CD007_12250 PF06014 Bacterial protein of unknown function (DUF910) CD007_12255 PF01694 Rhomboid family CD007_12255 PF13432 Tetratricopeptide repeat CD007_12265 PF01812 5-formyltetrahydrofolate cyclo-ligase family CD007_12270 PF00471 Ribosomal protein L33 CD007_12275 PF00534 Glycosyl transferases group 1 CD007_12275 PF13439 Glycosyltransferase Family 4 CD007_12290 PF02618 YceG-like family CD007_12295 PF00005 ABC transporter CD007_12300 PF00005 ABC transporter CD007_12305 PF00528 Binding-protein-dependent transport system inner membrane component CD007_12310 PF00528 Binding-protein-dependent transport system inner membrane component CD007_12315 PF12849 PBP superfamily domain CD007_12320 PF00905 Penicillin binding protein transpeptidase domain CD007_12320 PF03717 Penicillin-binding Protein dimerisation domain CD007_12325 PF07690 Major Facilitator Superfamily CD007_12330 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain CD007_12330 PF02777 Iron/manganese superoxide dismutases, C-terminal domain CD007_12335 PF04306 CD007_12335 CD007_12340 PF06691 CD007_12340 CD007_12350 PF04551 GcpE protein CD007_12365 PF01475 Ferric uptake regulator family CD007_12370 PF02588 CD007_12370 CD007_12370 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) CD007_12375 PF11116 CD007_12375 CD007_12380 PF01261 Xylose isomerase-like TIM barrel CD007_12385 PF00270 DEAD/DEAH box helicase CD007_12385 PF00271 Helicase conserved C-terminal domain CD007_12390 PF14181 CD007_12390 CD007_12395 PF02401 LytB protein CD007_12400 PF01784 NIF3 (NGG1p interacting factor 3) CD007_12405 PF04816 Family of unknown function (DUF633) CD007_12410 PF13442 Cytochrome C oxidase, cbb3-type, subunit III CD007_12420 PF00140 Sigma-70 factor, region 1 CD007_12420 PF03979 Sigma-70 factor, region 1 CD007_12420 PF04539 Sigma-70 region 3 CD007_12420 PF04542 Sigma-70 region 2 CD007_12420 PF04545 Sigma-70, region 4 CD007_12425 PF01807 CHC2 zinc finger CD007_12425 PF08275 DNA primase catalytic core, N-terminal domain CD007_12425 PF10410 DnaB-helicase binding domain of primase CD007_12425 PF13155 Toprim-like CD007_12430 PF02639 CD007_12430 CD007_12435 PF03618 CD007_12435 CD007_12440 PF00571 CBS domain CD007_12440 PF08279 HTH domain CD007_12445 PF02092 CD007_12445 CD007_12450 PF02091 Glycyl-tRNA synthetase alpha subunit CD007_12455 PF02565 Recombination protein O C terminal CD007_12455 PF11967 Recombination protein O N terminal CD007_12460 PF14006 CD007_12460 CD007_12465 PF01926 50S ribosome-binding GTPase CD007_12465 PF07650 KH domain CD007_12470 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region CD007_12475 PF01219 Prokaryotic diacylglycerol kinase CD007_12480 PF02130 Uncharacterized protein family UPF0054 CD007_12485 PF01966 HD domain CD007_12485 PF07697 CD007_12485 CD007_12485 PF07698 CD007_12485 CD007_12490 PF02562 PhoH-like protein CD007_12495 PF06898 CD007_12495 CD007_12500 PF07873 YabP family CD007_12510 PF12127 CD007_12510 CD007_12515 PF01957 NfeD-like C-terminal, partner-binding CD007_12515 PF01972 Serine dehydrogenase proteinase CD007_12520 PF09424 Yqey-like protein CD007_12525 PF01165 Ribosomal protein S21 CD007_12530 PF02690 CD007_12530 CD007_12535 PF00919 Uncharacterized protein family UPF0004 CD007_12535 PF01938 TRAM domain CD007_12535 PF04055 Radical SAM superfamily CD007_12540 PF04452 RNA methyltransferase CD007_12545 PF06325 Ribosomal protein L11 methyltransferase (PrmA) CD007_12550 PF00226 DnaJ domain CD007_12550 PF00684 DnaJ central domain CD007_12550 PF01556 DnaJ C terminal domain CD007_12555 PF00012 Hsp70 protein CD007_12560 PF01025 GrpE CD007_12565 PF01628 HrcA protein C terminal domain CD007_12570 PF04055 Radical SAM superfamily CD007_12570 PF06969 HemN C-terminal domain CD007_12575 PF00009 Elongation factor Tu GTP binding domain CD007_12575 PF00679 Elongation factor G C-terminus CD007_12575 PF03144 Elongation factor Tu domain 2 CD007_12575 PF06421 GTP-binding protein LepA C-terminus CD007_12580 PF12438 CD007_12580 CD007_12585 PF07454 CD007_12585 CD007_12590 PF03418 Germination protease CD007_12595 PF01649 Ribosomal protein S20 CD007_12600 PF06144 DNA polymerase III, delta subunit CD007_12605 PF14141 CD007_12605 CD007_12610 PF00753 Metallo-beta-lactamase superfamily CD007_12610 PF03772 CD007_12610 CD007_12610 PF13567 CD007_12610 CD007_12615 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region CD007_12620 PF10531 SLBB domain CD007_12620 PF12836 Helix-hairpin-helix motif CD007_12625 PF03807 NADP oxidoreductase coenzyme F420-dependent CD007_12625 PF14748 Pyrroline-5-carboxylate reductase dimerisation CD007_12630 PF13649 Methyltransferase domain CD007_12635 PF02410 Oligomerisation domain CD007_12640 PF01966 HD domain CD007_12645 PF01467 Cytidylyltransferase CD007_12650 PF01985 CRS1 / YhbY (CRM) domain CD007_12655 PF01488 Shikimate / quinate 5-dehydrogenase CD007_12655 PF08501 Shikimate dehydrogenase substrate binding domain CD007_12660 PF01926 50S ribosome-binding GTPase CD007_12665 PF13419 Haloacid dehalogenase-like hydrolase CD007_12670 PF08970 Sporulation inhibitor A CD007_12675 PF13472 GDSL-like Lipase/Acylhydrolase family CD007_12680 PF01471 Putative peptidoglycan binding domain CD007_12680 PF01510 N-acetylmuramoyl-L-alanine amidase CD007_12685 PF09335 CD007_12685 CD007_12690 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain CD007_12690 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase CD007_12700 PF14040 CD007_12700 CD007_12705 PF04542 Sigma-70 region 2 CD007_12710 PF00239 Resolvase, N terminal domain CD007_12710 PF07508 Recombinase CD007_12710 PF13408 Recombinase zinc beta ribbon domain CD007_12720 PF01451 Low molecular weight phosphotyrosine protein phosphatase CD007_12725 PF01758 Sodium Bile acid symporter family CD007_12730 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CD007_12735 PF01022 Bacterial regulatory protein, arsR family CD007_12740 PF08892 CD007_12740 CD007_12745 PF13181 Tetratricopeptide repeat CD007_12745 PF13424 Tetratricopeptide repeat CD007_12760 PF04740 CD007_12760 CD007_12760 PF14410 CD007_12760 CD007_12760 PF14449 CD007_12760 CD007_12765 PF05076 Suppressor of fused protein (SUFU) CD007_12780 PF01471 Putative peptidoglycan binding domain CD007_12780 PF01510 N-acetylmuramoyl-L-alanine amidase CD007_12785 PF05105 CD007_12785 CD007_12795 PF09693 CD007_12795 CD007_12800 PF09636 XkdW protein CD007_12815 PF10076 CD007_12815 CD007_12820 PF04865 CD007_12820 CD007_12825 PF10934 CD007_12825 CD007_12830 PF10844 CD007_12830 CD007_12840 PF01476 LysM domain CD007_12845 PF01464 Transglycosylase SLT domain CD007_12855 PF08890 Phage XkdN-like protein CD007_12870 PF09393 Protein of unknown function (DUF2001) CD007_12875 PF04984 Phage tail sheath protein CD007_12875 PF17481 CD007_12875 CD007_12875 PF17482 CD007_12875 CD007_12890 PF04883 CD007_12890 CD007_12895 PF12206 Domain of unknown function (DUF3599) CD007_12900 PF11436 Protein of unknown function (DUF3199) CD007_12905 PF14553 YqbF, hypothetical protein domain CD007_12910 PF05065 Phage capsid family CD007_12915 PF14550 CD007_12915 CD007_12925 PF04233 CD007_12925 CD007_12930 PF04860 Phage portal protein CD007_12935 PF04466 Phage terminase large subunit CD007_12935 PF17288 CD007_12935 CD007_12940 PF10668 CD007_12940 CD007_12960 PF17356 CD007_12960 CD007_12965 PF05866 Endodeoxyribonuclease RusA CD007_12975 PF01695 IstB-like ATP binding protein CD007_12980 PF07261 Replication initiation and membrane attachment CD007_12985 PF03837 CD007_12985 CD007_12990 PF09588 YqaJ-like viral recombinase domain CD007_12995 PF09466 Hypothetical protein Yqai CD007_13000 PF17448 CD007_13000 CD007_13005 PF01381 Helix-turn-helix CD007_13015 PF01381 Helix-turn-helix CD007_13020 PF01381 Helix-turn-helix CD007_13030 PF13238 AAA domain CD007_13035 PF06114 Domain of unknown function (DUF955) CD007_13040 PF04545 Sigma-70, region 4 CD007_13045 PF00239 Resolvase, N terminal domain CD007_13055 PF06146 CD007_13055 CD007_13060 PF00512 His Kinase A (phospho-acceptor) domain CD007_13065 PF00072 Response regulator receiver domain CD007_13065 PF00486 Transcriptional regulatory protein, C terminal CD007_13070 PF04235 CD007_13070 CD007_13075 PF00583 Acetyltransferase (GNAT) family CD007_13080 PF02525 Flavodoxin-like fold CD007_13085 PF13787 CD007_13085 CD007_13090 PF01925 CD007_13090 CD007_13095 PF01206 Sulfurtransferase TusA CD007_13105 PF13686 DsrE/DsrF/DrsH-like family CD007_13110 PF00581 Rhodanese-like domain CD007_13110 PF01206 Sulfurtransferase TusA CD007_13120 PF13686 DsrE/DsrF/DrsH-like family CD007_13125 PF02583 Metal-sensitive transcriptional repressor CD007_13140 PF07883 Cupin domain CD007_13155 PF13411 MerR HTH family regulatory protein CD007_13160 PF07690 Major Facilitator Superfamily CD007_13165 PF00583 Acetyltransferase (GNAT) family CD007_13170 PF00571 CBS domain CD007_13170 PF01595 CD007_13170 CD007_13170 PF03471 Transporter associated domain CD007_13175 PF14142 CD007_13175 CD007_13180 PF00892 EamA-like transporter family CD007_13185 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CD007_13185 PF03466 LysR substrate binding domain CD007_13190 PF13738 Pyridine nucleotide-disulphide oxidoreductase CD007_13195 PF01545 Cation efflux family CD007_13195 PF16916 CD007_13195 CD007_13200 PF14552 Tautomerase enzyme CD007_13205 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CD007_13205 PF03466 LysR substrate binding domain CD007_13215 PF05525 CD007_13215 CD007_13220 PF05437 CD007_13220 CD007_13225 PF03591 CD007_13225 CD007_13230 PF01037 AsnC family CD007_13230 PF13412 Winged helix-turn-helix DNA-binding CD007_13235 PF01337 Barstar (barnase inhibitor) CD007_13240 PF00067 Cytochrome P450 CD007_13250 PF00857 Isochorismatase family CD007_13255 PF10823 CD007_13255 CD007_13260 PF05163 DinB family CD007_13265 PF04439 Streptomycin adenylyltransferase CD007_13270 PF03060 Nitronate monooxygenase CD007_13285 PF01177 Asp/Glu/Hydantoin racemase CD007_13290 PF15493 Domain of unknown function, YrpD CD007_13295 PF00392 Bacterial regulatory proteins, gntR family CD007_13295 PF07729 FCD domain CD007_13300 PF07690 Major Facilitator Superfamily CD007_13305 PF13561 Enoyl-(Acyl carrier protein) reductase CD007_13310 PF02779 Transketolase, pyrimidine binding domain CD007_13310 PF02780 Transketolase, C-terminal domain CD007_13315 PF00456 Transketolase, thiamine diphosphate binding domain CD007_13320 PF07690 Major Facilitator Superfamily CD007_13325 PF01047 MarR family CD007_13330 PF09223 YodA lipocalin-like domain CD007_13335 PF04542 Sigma-70 region 2 CD007_13335 PF08281 Sigma-70, region 4 CD007_13340 PF00248 Aldo/keto reductase family CD007_13345 PF03600 Citrate transporter CD007_13350 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CD007_13350 PF03466 LysR substrate binding domain CD007_13355 PF04303 PrpF protein CD007_13360 PF01374 Glycosyl hydrolase family 46 CD007_13370 PF00561 alpha/beta hydrolase fold CD007_13385 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CD007_13395 PF07875 CD007_13395 CD007_13400 PF00107 Zinc-binding dehydrogenase CD007_13400 PF08240 Alcohol dehydrogenase GroES-like domain CD007_13400 PF13823 Alcohol dehydrogenase GroES-associated CD007_13410 PF07875 CD007_13410 CD007_13415 PF13411 MerR HTH family regulatory protein CD007_13425 PF00107 Zinc-binding dehydrogenase CD007_13425 PF08240 Alcohol dehydrogenase GroES-like domain CD007_13430 PF01965 DJ-1/PfpI family CD007_13435 PF00251 Glycosyl hydrolases family 32 N-terminal domain CD007_13435 PF08244 Glycosyl hydrolases family 32 C terminal CD007_13440 PF03613 CD007_13440 CD007_13445 PF03609 CD007_13445 CD007_13450 PF03830 PTS system sorbose subfamily IIB component CD007_13455 PF03610 PTS system fructose IIA component CD007_13460 PF00158 Sigma-54 interaction domain CD007_13460 PF00874 PRD domain CD007_13460 PF03610 PTS system fructose IIA component CD007_13465 PF00324 Amino acid permease CD007_13470 PF01810 CD007_13470 CD007_13475 PF01978 Sugar-specific transcriptional regulator TrmB CD007_13475 PF11495 Archaeal transcriptional regulator TrmB CD007_13480 PF04542 Sigma-70 region 2 CD007_13480 PF08281 Sigma-70, region 4 CD007_13485 PF11738 Protein of unknown function (DUF3298) CD007_13485 PF13739 Domain of unknown function (DUF4163) CD007_13490 PF01757 CD007_13490 CD007_13495 PF14145 CD007_13495 CD007_13500 PF00067 Cytochrome P450 CD007_13500 PF00175 Oxidoreductase NAD-binding domain CD007_13500 PF00258 Flavodoxin CD007_13500 PF00667 FAD binding domain CD007_13505 PF00440 Bacterial regulatory proteins, tetR family CD007_13505 PF16295 CD007_13505 CD007_13510 PF08241 Methyltransferase domain CD007_13515 PF09501 CD007_13515 CD007_13520 PF01226 Formate/nitrite transporter CD007_13525 PF10057 CD007_13525 CD007_13530 PF00384 Molybdopterin oxidoreductase CD007_13530 PF01568 Molydopterin dinucleotide binding domain CD007_13530 PF04879 Molybdopterin oxidoreductase Fe4S4 domain CD007_13530 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region CD007_13530 PF12838 4Fe-4S dicluster domain CD007_13530 PF13510 2Fe-2S iron-sulfur cluster binding domain CD007_13535 PF07849 CD007_13535 CD007_13540 PF14143 CD007_13540 CD007_13545 PF01053 Cys/Met metabolism PLP-dependent enzyme CD007_13550 PF00291 Pyridoxal-phosphate dependent enzyme CD007_13555 PF01048 Phosphorylase superfamily CD007_13560 PF13649 Methyltransferase domain CD007_13565 PF10750 CD007_13565 CD007_13570 PF07423 CD007_13570 CD007_13575 PF00905 Penicillin binding protein transpeptidase domain CD007_13575 PF03717 Penicillin-binding Protein dimerisation domain CD007_13580 PF01272 Transcription elongation factor, GreA/GreB, C-term CD007_13580 PF03449 Transcription elongation factor, N-terminal CD007_13585 PF00485 Phosphoribulokinase / Uridine kinase family CD007_13590 PF01136 CD007_13590 CD007_13590 PF16325 CD007_13590 CD007_13595 PF01136 CD007_13595 CD007_13600 PF01596 O-methyltransferase CD007_13605 PF02618 YceG-like family CD007_13610 PF06949 CD007_13610 CD007_13615 PF03652 Uncharacterised protein family (UPF0081) CD007_13620 PF06135 CD007_13620 CD007_13625 PF01411 tRNA synthetases class II (A) CD007_13625 PF02272 DHHA1 domain CD007_13625 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain CD007_13630 PF01594 CD007_13630 CD007_13635 PF00005 ABC transporter CD007_13640 PF00497 Bacterial extracellular solute-binding proteins, family 3 CD007_13645 PF00528 Binding-protein-dependent transport system inner membrane component CD007_13650 PF00528 Binding-protein-dependent transport system inner membrane component CD007_13655 PF13056 CD007_13655 CD007_13665 PF05239 PRC-barrel domain CD007_13670 PF13538 UvrD-like helicase C-terminal domain CD007_13670 PF13604 AAA domain CD007_13670 PF14490 Helix-hairpin-helix containing domain CD007_13675 PF07719 Tetratricopeptide repeat CD007_13675 PF12895 Anaphase-promoting complex, cyclosome, subunit 3 CD007_13675 PF13414 TPR repeat CD007_13680 PF03054 tRNA methyl transferase CD007_13685 PF00266 Aminotransferase class-V CD007_13690 PF02082 Transcriptional regulator CD007_13695 PF05496 Holliday junction DNA helicase ruvB N-terminus CD007_13695 PF12002 MgsA AAA+ ATPase C terminal CD007_13695 PF16193 CD007_13695 CD007_13700 PF00899 ThiF family CD007_13710 PF00152 tRNA synthetases class II (D, K and N) CD007_13710 PF01336 OB-fold nucleic acid binding domain CD007_13710 PF02938 GAD domain CD007_13715 PF03129 Anticodon binding domain CD007_13715 PF13393 Histidyl-tRNA synthetase CD007_13720 PF17449 CD007_13720 CD007_13725 PF01520 N-acetylmuramoyl-L-alanine amidase CD007_13725 PF08239 Bacterial SH3 domain CD007_13730 PF02580 D-Tyr-tRNA(Tyr) deacylase CD007_13735 PF02824 TGS domain CD007_13735 PF04607 Region found in RelA / SpoT proteins CD007_13735 PF13291 ACT domain CD007_13735 PF13328 HD domain CD007_13740 PF00156 Phosphoribosyl transferase domain CD007_13745 PF01368 DHH family CD007_13745 PF02272 DHHA1 domain CD007_13745 PF10141 CD007_13745 CD007_13750 PF06305 CD007_13750 CD007_13755 PF02080 TrkA-C domain CD007_13760 PF02355 Protein export membrane protein CD007_13760 PF07549 SecD/SecF GG Motif CD007_13765 PF13797 CD007_13765 CD007_13770 PF01943 CD007_13770 CD007_13770 PF14667 Polysaccharide biosynthesis C-terminal domain CD007_13775 PF04239 Protein of unknown function (DUF421) CD007_13780 PF12670 CD007_13780 CD007_13785 PF02699 Preprotein translocase subunit CD007_13790 PF01702 Queuine tRNA-ribosyltransferase CD007_13795 PF02547 Queuosine biosynthesis protein CD007_13800 PF11146 CD007_13800 CD007_13805 PF05491 Holliday junction DNA helicase ruvB C-terminus CD007_13805 PF05496 Holliday junction DNA helicase ruvB N-terminus CD007_13810 PF01330 RuvA N terminal domain CD007_13810 PF07499 RuvA, C-terminal domain CD007_13810 PF14520 Helix-hairpin-helix domain CD007_13815 PF08955 BofC C-terminal domain CD007_13815 PF08977 Bypass of Forespore C, N terminal CD007_13820 PF07690 Major Facilitator Superfamily CD007_13825 PF01408 Oxidoreductase family, NAD-binding Rossmann fold CD007_13825 PF02894 Oxidoreductase family, C-terminal alpha/beta domain CD007_13845 PF01235 CD007_13845 CD007_13850 PF01709 Transcriptional regulator CD007_13855 PF09580 CD007_13855 CD007_13860 PF01476 LysM domain CD007_13865 PF02445 Quinolinate synthetase A protein CD007_13870 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain CD007_13870 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain CD007_13875 PF00890 FAD binding domain CD007_13875 PF02910 Fumarate reductase flavoprotein C-term CD007_13880 PF00266 Aminotransferase class-V CD007_13885 PF02829 3H domain CD007_13885 PF08279 HTH domain CD007_13890 PF00800 Prephenate dehydratase CD007_13890 PF01842 ACT domain CD007_13895 PF01842 ACT domain CD007_13900 PF01018 GTP1/OBG CD007_13900 PF01926 50S ribosome-binding GTPase CD007_13900 PF09269 Domain of unknown function (DUF1967) CD007_13905 PF14682 Sporulation initiation phospho-transferase B, C-terminal CD007_13905 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain CD007_13910 PF01016 Ribosomal L27 protein CD007_13915 PF04327 Protein of unknown function (DUF464) CD007_13920 PF00829 Ribosomal prokaryotic L21 protein CD007_13925 PF02163 Peptidase family M50 CD007_13930 PF01551 Peptidase family M23 CD007_13935 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain CD007_13940 PF03775 Septum formation inhibitor MinC, C-terminal domain CD007_13945 PF04093 CD007_13945 CD007_13950 PF04085 rod shape-determining protein MreC CD007_13955 PF06723 MreB/Mbl protein CD007_13960 PF00633 Helix-hairpin-helix motif CD007_13960 PF04002 RadC-like JAB domain CD007_13965 PF02545 Maf-like protein CD007_13970 PF05036 Sporulation related domain CD007_13975 PF01478 Type IV leader peptidase family CD007_13975 PF06750 CD007_13975 CD007_13980 PF02875 Mur ligase family, glutamate ligase domain CD007_13980 PF08245 Mur ligase middle domain CD007_13985 PF00133 tRNA synthetases class I (I, L, M and V) CD007_13985 PF08264 Anticodon-binding domain of tRNA CD007_13985 PF10458 Valyl tRNA synthetase tRNA binding arm CD007_14000 PF01476 LysM domain CD007_14005 PF00202 Aminotransferase class-III CD007_14010 PF00490 Delta-aminolevulinic acid dehydratase CD007_14015 PF02602 Uroporphyrinogen-III synthase HemD CD007_14020 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain CD007_14020 PF03900 Porphobilinogen deaminase, C-terminal domain CD007_14025 PF01578 CD007_14025 CD007_14030 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain CD007_14030 PF01488 Shikimate / quinate 5-dehydrogenase CD007_14030 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain CD007_14040 PF01926 50S ribosome-binding GTPase CD007_14045 PF00004 ATPase family associated with various cellular activities (AAA) CD007_14045 PF02190 ATP-dependent protease La (LON) domain CD007_14045 PF05362 Lon protease (S16) C-terminal proteolytic domain CD007_14050 PF00004 ATPase family associated with various cellular activities (AAA) CD007_14050 PF05362 Lon protease (S16) C-terminal proteolytic domain CD007_14055 PF06689 ClpX C4-type zinc finger CD007_14055 PF07724 AAA domain (Cdc48 subfamily) CD007_14055 PF10431 C-terminal, D2-small domain, of ClpB protein CD007_14060 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase CD007_14060 PF05697 Bacterial trigger factor protein (TF) CD007_14060 PF05698 Bacterial trigger factor protein (TF) C-terminus CD007_14065 PF14559 Tetratricopeptide repeat CD007_14070 PF00694 Aconitase C-terminal domain CD007_14075 PF00330 Aconitase family (aconitate hydratase) CD007_14080 PF00180 Isocitrate/isopropylmalate dehydrogenase CD007_14085 PF00682 HMGL-like CD007_14085 PF08502 LeuA allosteric (dimerisation) domain CD007_14090 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain CD007_14090 PF07991 Acetohydroxy acid isomeroreductase, catalytic domain CD007_14095 PF01842 ACT domain CD007_14095 PF10369 Small subunit of acetolactate synthase CD007_14100 PF00205 Thiamine pyrophosphate enzyme, central domain CD007_14100 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CD007_14100 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CD007_14115 PF00583 Acetyltransferase (GNAT) family CD007_14120 PF09557 CD007_14120 CD007_14120 PF11181 CD007_14120 CD007_14130 PF12850 Calcineurin-like phosphoesterase superfamily domain CD007_14135 PF01725 Ham1 family CD007_14140 PF01138 3' exoribonuclease family, domain 1 CD007_14140 PF03725 3' exoribonuclease family, domain 2 CD007_14145 PF10646 CD007_14145 CD007_14150 PF01177 Asp/Glu/Hydantoin racemase CD007_14155 PF01047 MarR family CD007_14160 PF00196 Bacterial regulatory proteins, luxR family CD007_14165 PF03061 Thioesterase superfamily CD007_14170 PF13085 2Fe-2S iron-sulfur cluster binding domain CD007_14170 PF13183 4Fe-4S dicluster domain CD007_14175 PF00890 FAD binding domain CD007_14175 PF02910 Fumarate reductase flavoprotein C-term CD007_14180 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit CD007_14185 PF10702 Protein of unknown function (DUF2507) CD007_14190 PF00696 Amino acid kinase family CD007_14190 PF01842 ACT domain CD007_14190 PF13840 ACT domain CD007_14200 PF01541 GIY-YIG catalytic domain CD007_14200 PF02151 UvrB/uvrC motif CD007_14200 PF08459 UvrC Helix-hairpin-helix N-terminal CD007_14205 PF00085 Thioredoxin CD007_14215 PF06964 Alpha-L-arabinofuranosidase C-terminus CD007_14220 PF00766 Electron transfer flavoprotein FAD-binding domain CD007_14220 PF01012 Electron transfer flavoprotein domain CD007_14225 PF01012 Electron transfer flavoprotein domain CD007_14230 PF00378 Enoyl-CoA hydratase/isomerase family CD007_14235 PF00440 Bacterial regulatory proteins, tetR family CD007_14235 PF08359 YsiA-like protein, C-terminal region CD007_14240 PF00501 AMP-binding enzyme CD007_14240 PF13193 AMP-binding enzyme C-terminal domain CD007_14250 PF03994 CD007_14250 CD007_14255 PF00488 MutS domain V CD007_14255 PF01713 Smr domain CD007_14260 PF02811 PHP domain CD007_14260 PF14520 Helix-hairpin-helix domain CD007_14260 PF14716 Helix-hairpin-helix domain CD007_14260 PF14791 DNA polymerase beta thumb CD007_14265 PF02674 CD007_14265 CD007_14270 PF05164 Cell division protein ZapA CD007_14275 PF01351 Ribonuclease HII CD007_14275 PF11858 Domain of unknown function (DUF3378) CD007_14280 PF01588 Putative tRNA binding domain CD007_14280 PF03147 Ferredoxin-fold anticodon binding domain CD007_14280 PF03483 B3/4 domain CD007_14280 PF03484 tRNA synthetase B5 domain CD007_14285 PF01409 tRNA synthetases class II core domain (F) CD007_14285 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain CD007_14295 PF00588 SpoU rRNA Methylase family CD007_14295 PF08032 RNA 2'-O ribose methyltransferase substrate binding CD007_14300 PF14098 CD007_14300 CD007_14305 PF05651 CD007_14305 CD007_14305 PF13556 PucR C-terminal helix-turn-helix domain CD007_14310 PF01565 FAD binding domain CD007_14310 PF02913 FAD linked oxidases, C-terminal domain CD007_14315 PF02754 CD007_14315 CD007_14315 PF13183 4Fe-4S dicluster domain CD007_14320 PF12681 Glyoxalase-like domain CD007_14330 PF02554 CD007_14330 CD007_14330 PF13722 CD007_14330 CD007_14335 PF06964 Alpha-L-arabinofuranosidase C-terminus CD007_14340 PF00528 Binding-protein-dependent transport system inner membrane component CD007_14345 PF00528 Binding-protein-dependent transport system inner membrane component CD007_14350 PF01547 Bacterial extracellular solute-binding protein CD007_14355 PF13685 Iron-containing alcohol dehydrogenase CD007_14360 PF13242 HAD-hyrolase-like CD007_14360 PF13344 Haloacid dehalogenase-like hydrolase CD007_14365 PF00596 Class II Aldolase and Adducin N-terminal domain CD007_14370 PF00370 FGGY family of carbohydrate kinases, N-terminal domain CD007_14370 PF02782 FGGY family of carbohydrate kinases, C-terminal domain CD007_14375 PF02610 L-arabinose isomerase CD007_14375 PF11762 L-arabinose isomerase C-terminal domain CD007_14380 PF04616 Glycosyl hydrolases family 43 CD007_14385 PF05343 M42 glutamyl aminopeptidase CD007_14395 PF06961 CD007_14395 CD007_14400 PF00453 Ribosomal protein L20 CD007_14405 PF01632 Ribosomal protein L35 CD007_14410 PF00707 Translation initiation factor IF-3, C-terminal domain CD007_14410 PF05198 Translation initiation factor IF-3, N-terminal domain CD007_14420 PF04172 CD007_14420 CD007_14425 PF03788 CD007_14425 CD007_14430 PF00072 Response regulator receiver domain CD007_14430 PF04397 LytTr DNA-binding domain CD007_14435 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CD007_14435 PF06580 CD007_14435 CD007_14435 PF07694 5TMR of 5TMR-LYT CD007_14435 PF15714 CD007_14435 CD007_14440 PF13419 Haloacid dehalogenase-like hydrolase CD007_14445 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CD007_14445 PF02824 TGS domain CD007_14445 PF03129 Anticodon binding domain CD007_14445 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain CD007_14450 PF08812 CD007_14450 CD007_14455 PF09335 CD007_14455 CD007_14460 PF01695 IstB-like ATP binding protein CD007_14460 PF07319 Primosomal protein DnaI N-terminus CD007_14465 PF07261 Replication initiation and membrane attachment CD007_14470 PF03477 ATP cone domain CD007_14475 PF02675 S-adenosylmethionine decarboxylase CD007_14480 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain CD007_14480 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain CD007_14485 PF01638 HxlR-like helix-turn-helix CD007_14490 PF07690 Major Facilitator Superfamily CD007_14495 PF00248 Aldo/keto reductase family CD007_14500 PF01121 Dephospho-CoA kinase CD007_14505 PF02659 CD007_14505 CD007_14510 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain CD007_14510 PF06827 Zinc finger found in FPG and IleRS CD007_14510 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain CD007_14515 PF00476 DNA polymerase family A CD007_14515 PF01367 5'-3' exonuclease, C-terminal SAM fold CD007_14515 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain CD007_14520 PF00512 His Kinase A (phospho-acceptor) domain CD007_14520 PF00989 PAS fold CD007_14520 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CD007_14520 PF16736 CD007_14520 CD007_14525 PF00072 Response regulator receiver domain CD007_14525 PF00486 Transcriptional regulatory protein, C terminal CD007_14535 PF00056 lactate/malate dehydrogenase, NAD binding domain CD007_14535 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain CD007_14540 PF00180 Isocitrate/isopropylmalate dehydrogenase CD007_14545 PF00285 Citrate synthase CD007_14550 PF04284 CD007_14550 CD007_14555 PF01594 CD007_14555 CD007_14560 PF04186 CD007_14560 CD007_14565 PF00224 Pyruvate kinase, barrel domain CD007_14565 PF00391 PEP-utilising enzyme, mobile domain CD007_14565 PF02887 Pyruvate kinase, alpha/beta domain CD007_14570 PF00365 Phosphofructokinase CD007_14575 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit CD007_14580 PF01039 Carboxyl transferase domain CD007_14585 PF00390 Malic enzyme, N-terminal domain CD007_14585 PF03949 Malic enzyme, NAD binding domain CD007_14590 PF01336 OB-fold nucleic acid binding domain CD007_14590 PF02811 PHP domain CD007_14590 PF07733 Bacterial DNA polymerase III alpha subunit CD007_14590 PF14579 Helix-hairpin-helix motif CD007_14595 PF14034 CD007_14595 CD007_14610 PF01368 DHH family CD007_14610 PF02272 DHHA1 domain CD007_14615 PF14007 CD007_14615 CD007_14620 PF00392 Bacterial regulatory proteins, gntR family CD007_14620 PF00571 CBS domain CD007_14620 PF03061 Thioesterase superfamily CD007_14620 PF07085 DRTGG domain CD007_14625 PF01925 CD007_14625 CD007_14630 PF01546 Peptidase family M20/M25/M40 CD007_14630 PF07687 Peptidase dimerisation domain CD007_14635 PF01687 Riboflavin kinase CD007_14640 PF00296 Luciferase-like monooxygenase CD007_14645 PF00462 Glutaredoxin CD007_14650 PF00296 Luciferase-like monooxygenase CD007_14655 PF00005 ABC transporter CD007_14660 PF00528 Binding-protein-dependent transport system inner membrane component CD007_14665 PF00528 Binding-protein-dependent transport system inner membrane component CD007_14670 PF00497 Bacterial extracellular solute-binding proteins, family 3 CD007_14675 PF00497 Bacterial extracellular solute-binding proteins, family 3 CD007_14680 PF00583 Acetyltransferase (GNAT) family CD007_14685 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CD007_14685 PF03466 LysR substrate binding domain CD007_14690 PF13483 Beta-lactamase superfamily domain CD007_14695 PF13561 Enoyl-(Acyl carrier protein) reductase CD007_14705 PF00206 Lyase CD007_14705 PF14698 Argininosuccinate lyase C-terminal CD007_14710 PF00764 Arginosuccinate synthase CD007_14715 PF00994 Probable molybdopterin binding domain CD007_14720 PF00871 Acetokinase family CD007_14730 PF02384 N-6 DNA Methylase CD007_14735 PF08534 Redoxin CD007_14740 PF09579 CD007_14740 CD007_14745 PF11167 CD007_14745 CD007_14750 PF06271 CD007_14750 CD007_14755 PF01343 Peptidase family S49 CD007_14760 PF01513 ATP-NAD kinase CD007_14765 PF07969 Amidohydrolase family CD007_14770 PF00501 AMP-binding enzyme CD007_14770 PF13193 AMP-binding enzyme C-terminal domain CD007_14775 PF00269 Small, acid-soluble spore proteins, alpha/beta type CD007_14780 PF02568 Thiamine biosynthesis protein (ThiI) CD007_14780 PF02926 THUMP domain CD007_14785 PF00266 Aminotransferase class-V CD007_14790 PF05525 CD007_14790 CD007_14795 PF06160 CD007_14795 CD007_14800 PF02811 PHP domain CD007_14800 PF13263 PHP-associated CD007_14805 PF00440 Bacterial regulatory proteins, tetR family CD007_14810 PF13185 GAF domain CD007_14815 PF00990 GGDEF domain CD007_14825 PF00163 Ribosomal protein S4/S9 N-terminal domain CD007_14825 PF01479 S4 domain CD007_14830 PF00579 tRNA synthetases class I (W and Y) CD007_14830 PF01479 S4 domain CD007_14840 PF00501 AMP-binding enzyme CD007_14840 PF13193 AMP-binding enzyme C-terminal domain CD007_14845 PF00583 Acetyltransferase (GNAT) family CD007_14850 PF00571 CBS domain CD007_14855 PF00850 Histone deacetylase domain CD007_14860 PF00691 OmpA family CD007_14860 PF13677 CD007_14860 CD007_14865 PF01618 CD007_14865 CD007_14870 PF00356 Bacterial regulatory proteins, lacI family CD007_14870 PF13377 Periplasmic binding protein-like domain CD007_14875 PF00793 DAHP synthetase I family CD007_14875 PF01817 Chorismate mutase type II CD007_14880 PF11009 Protein of unknown function (DUF2847) CD007_14885 PF12732 CD007_14885 CD007_14890 PF06103 CD007_14890 CD007_14895 PF01225 Mur ligase family, catalytic domain CD007_14895 PF02875 Mur ligase family, glutamate ligase domain CD007_14895 PF08245 Mur ligase middle domain CD007_14900 PF01580 FtsK/SpoIIIE family CD007_14900 PF09397 Ftsk gamma domain CD007_14905 PF01588 Putative tRNA binding domain CD007_14905 PF14794 Domain of unknown function (DUF4479) CD007_14910 PF07285 CD007_14910 CD007_14915 PF00085 Thioredoxin CD007_14920 PF11071 CD007_14920 CD007_14925 PF05343 M42 glutamyl aminopeptidase CD007_14930 PF03413 Peptidase propeptide and YPEB domain CD007_14935 PF00390 Malic enzyme, N-terminal domain CD007_14935 PF03949 Malic enzyme, NAD binding domain CD007_14940 PF00753 Metallo-beta-lactamase superfamily CD007_14945 PF02390 Putative methyltransferase CD007_14950 PF14165 CD007_14950 CD007_14955 PF01636 Phosphotransferase enzyme family CD007_14960 PF00128 Alpha amylase, catalytic domain CD007_14960 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) CD007_14965 PF00781 Diacylglycerol kinase catalytic domain CD007_14975 PF13563 2'-5' RNA ligase superfamily CD007_14980 PF00291 Pyridoxal-phosphate dependent enzyme CD007_14985 PF01546 Peptidase family M20/M25/M40 CD007_14990 PF00860 Permease family CD007_14995 PF05975 CD007_14995 CD007_15000 PF00005 ABC transporter CD007_15005 PF08220 DeoR-like helix-turn-helix domain CD007_15010 PF00849 RNA pseudouridylate synthase CD007_15010 PF01479 S4 domain CD007_15015 PF01943 CD007_15015 CD007_15015 PF14667 Polysaccharide biosynthesis C-terminal domain CD007_15020 PF03486 HI0933-like protein CD007_15025 PF02028 BCCT family transporter CD007_15030 PF10957 CD007_15030 CD007_15035 PF04854 CD007_15035 CD007_15040 PF01408 Oxidoreductase family, NAD-binding Rossmann fold CD007_15040 PF02894 Oxidoreductase family, C-terminal alpha/beta domain CD007_15050 PF07470 Glycosyl Hydrolase Family 88 CD007_15055 PF00528 Binding-protein-dependent transport system inner membrane component CD007_15060 PF12833 Helix-turn-helix domain CD007_15065 PF13416 Bacterial extracellular solute-binding protein CD007_15070 PF00528 Binding-protein-dependent transport system inner membrane component CD007_15075 PF01370 NAD dependent epimerase/dehydratase family CD007_15080 PF00067 Cytochrome P450 CD007_15085 PF04055 Radical SAM superfamily CD007_15085 PF06968 Biotin and Thiamin Synthesis associated domain CD007_15090 PF13500 AAA domain CD007_15095 PF00155 Aminotransferase class I and II CD007_15100 PF00202 Aminotransferase class-III CD007_15105 PF03744 CD007_15105 CD007_15110 PF05448 Acetyl xylan esterase (AXE1) CD007_15115 PF00356 Bacterial regulatory proteins, lacI family CD007_15115 PF13377 Periplasmic binding protein-like domain CD007_15120 PF01547 Bacterial extracellular solute-binding protein CD007_15125 PF00528 Binding-protein-dependent transport system inner membrane component CD007_15130 PF00528 Binding-protein-dependent transport system inner membrane component CD007_15135 PF02056 Family 4 glycosyl hydrolase CD007_15135 PF11975 Family 4 glycosyl hydrolase C-terminal domain CD007_15140 PF00581 Rhodanese-like domain CD007_15145 PF00133 tRNA synthetases class I (I, L, M and V) CD007_15145 PF08264 Anticodon-binding domain of tRNA CD007_15145 PF09334 tRNA synthetases class I (M) CD007_15145 PF13603 Leucyl-tRNA synthetase, Domain 2 CD007_15150 PF14074 CD007_15150 CD007_15155 PF01740 STAS domain CD007_15155 PF13426 PAS domain CD007_15160 PF07690 Major Facilitator Superfamily CD007_15165 PF04791 CD007_15165 CD007_15170 PF02687 CD007_15170 CD007_15175 PF00005 ABC transporter CD007_15180 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CD007_15185 PF00072 Response regulator receiver domain CD007_15185 PF00486 Transcriptional regulatory protein, C terminal CD007_15190 PF02687 CD007_15190 CD007_15190 PF12704 MacB-like periplasmic core domain CD007_15195 PF00005 ABC transporter CD007_15210 PF00005 ABC transporter CD007_15215 PF00392 Bacterial regulatory proteins, gntR family CD007_15220 PF10732 CD007_15220 CD007_15225 PF04055 Radical SAM superfamily CD007_15225 PF16199 CD007_15225 CD007_15230 PF06962 Putative rRNA methylase CD007_15235 PF10776 CD007_15235 CD007_15240 PF12146 Putative lysophospholipase CD007_15245 PF00132 Bacterial transferase hexapeptide (six repeats) CD007_15250 PF00324 Amino acid permease CD007_15255 PF00733 Asparagine synthase CD007_15255 PF13537 Glutamine amidotransferase domain CD007_15260 PF00438 S-adenosylmethionine synthetase, N-terminal domain CD007_15260 PF02772 S-adenosylmethionine synthetase, central domain CD007_15260 PF02773 S-adenosylmethionine synthetase, C-terminal domain CD007_15265 PF01293 Phosphoenolpyruvate carboxykinase CD007_15270 PF10763 Protein of unknown function (DUF2584) CD007_15275 PF00326 Prolyl oligopeptidase family CD007_15280 PF13379 NMT1-like family CD007_15285 PF00005 ABC transporter CD007_15290 PF00528 Binding-protein-dependent transport system inner membrane component CD007_15295 PF00293 NUDIX domain CD007_15300 PF05105 CD007_15300 CD007_15305 PF00210 Ferritin-like domain CD007_15310 PF12606 CD007_15310 CD007_15315 PF13115 CD007_15315 CD007_15320 PF02664 S-Ribosylhomocysteinase (LuxS) CD007_15325 PF01809 CD007_15325 CD007_15330 PF00484 Carbonic anhydrase CD007_15335 PF01197 Ribosomal protein L31 CD007_15340 PF01654 CD007_15340 CD007_15345 PF02322 CD007_15345 CD007_15350 PF07561 CD007_15350 CD007_15355 PF00950 CD007_15355 CD007_15360 PF00950 CD007_15360 CD007_15365 PF00005 ABC transporter CD007_15370 PF01297 Periplasmic solute binding protein family CD007_15375 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain CD007_15375 PF13378 Enolase C-terminal domain-like CD007_15380 PF00501 AMP-binding enzyme CD007_15380 PF13193 AMP-binding enzyme C-terminal domain CD007_15385 PF00378 Enoyl-CoA hydratase/isomerase family CD007_15390 PF00561 alpha/beta hydrolase fold CD007_15395 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CD007_15395 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CD007_15395 PF16582 CD007_15395 CD007_15400 PF00425 chorismate binding enzyme CD007_15405 PF01258 Prokaryotic dksA/traR C4-type zinc finger CD007_15410 PF00483 Nucleotidyl transferase CD007_15415 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain CD007_15415 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain CD007_15415 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain CD007_15420 PF01370 NAD dependent epimerase/dehydratase family CD007_15425 PF00534 Glycosyl transferases group 1 CD007_15425 PF13439 Glycosyltransferase Family 4 CD007_15440 PF00534 Glycosyl transferases group 1 CD007_15440 PF13439 Glycosyltransferase Family 4 CD007_15445 PF01636 Phosphotransferase enzyme family CD007_15450 PF03073 TspO/MBR family CD007_15455 PF00343 Carbohydrate phosphorylase CD007_15460 PF00534 Glycosyl transferases group 1 CD007_15460 PF08323 Starch synthase catalytic domain CD007_15465 PF00483 Nucleotidyl transferase CD007_15470 PF00483 Nucleotidyl transferase CD007_15475 PF00128 Alpha amylase, catalytic domain CD007_15475 PF02806 Alpha amylase, C-terminal all-beta domain CD007_15475 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) CD007_15600 PF09515 Thiamine transporter protein (Thia_YuaJ) CD007_15605 PF00583 Acetyltransferase (GNAT) family CD007_15610 PF01145 SPFH domain / Band 7 family CD007_15610 PF15975 CD007_15610 CD007_15620 PF12867 DinB superfamily CD007_15630 PF00465 Iron-containing alcohol dehydrogenase CD007_15635 PF00171 Aldehyde dehydrogenase family CD007_15650 PF02080 TrkA-C domain CD007_15650 PF02254 TrkA-N domain CD007_15655 PF02386 Cation transport protein CD007_15660 PF05360 CD007_15660 CD007_15665 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase CD007_15665 PF13457 SH3-like domain CD007_15670 PF07690 Major Facilitator Superfamily CD007_15675 PF05995 Cysteine dioxygenase type I CD007_15685 PF02673 CD007_15685 CD007_15690 PF01594 CD007_15690 CD007_15695 PF01408 Oxidoreductase family, NAD-binding Rossmann fold CD007_15700 PF06134 L-rhamnose isomerase (RhaA) CD007_15705 PF05336 Domain of unknown function (DUF718) CD007_15710 PF00370 FGGY family of carbohydrate kinases, N-terminal domain CD007_15710 PF02782 FGGY family of carbohydrate kinases, C-terminal domain CD007_15715 PF00455 CD007_15715 CD007_15715 PF08220 DeoR-like helix-turn-helix domain CD007_15720 PF00596 Class II Aldolase and Adducin N-terminal domain CD007_15720 PF13561 Enoyl-(Acyl carrier protein) reductase CD007_15730 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CD007_15730 PF00672 HAMP domain CD007_15730 PF02743 Cache domain CD007_15735 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CD007_15735 PF00672 HAMP domain CD007_15735 PF02743 Cache domain CD007_15740 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CD007_15740 PF00672 HAMP domain CD007_15740 PF02743 Cache domain CD007_15745 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CD007_15745 PF00672 HAMP domain CD007_15745 PF02743 Cache domain CD007_15760 PF01894 Uncharacterised protein family UPF0047 CD007_15765 PF00128 Alpha amylase, catalytic domain CD007_15765 PF16657 CD007_15765 CD007_15770 PF00571 CBS domain CD007_15770 PF01595 CD007_15770 CD007_15770 PF03471 Transporter associated domain CD007_15775 PF04298 CD007_15775 CD007_15785 PF11458 Membrane-integrating protein Mistic CD007_15790 PF02254 TrkA-N domain CD007_15790 PF07885 Ion channel CD007_15795 PF08868 YugN-like family CD007_15805 PF00342 Phosphoglucose isomerase CD007_15810 PF00465 Iron-containing alcohol dehydrogenase CD007_15815 PF00465 Iron-containing alcohol dehydrogenase CD007_15820 PF04070 CD007_15820 CD007_15825 PF00575 S1 RNA binding domain CD007_15830 PF00155 Aminotransferase class I and II CD007_15835 PF01037 AsnC family CD007_15835 PF13412 Winged helix-turn-helix DNA-binding CD007_15840 PF00561 alpha/beta hydrolase fold CD007_15840 PF08386 TAP-like protein CD007_15845 PF08958 Domain of unknown function (DUF1871) CD007_15850 PF00155 Aminotransferase class I and II CD007_15855 PF00512 His Kinase A (phospho-acceptor) domain CD007_15855 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CD007_15860 PF08810 Kinase associated protein B CD007_15865 PF00929 Exonuclease CD007_15875 PF07690 Major Facilitator Superfamily CD007_15880 PF00905 Penicillin binding protein transpeptidase domain CD007_15880 PF00912 Transglycosylase CD007_15885 PF04134 CD007_15885 CD007_15890 PF17328 CD007_15890 CD007_15895 PF00989 PAS fold CD007_15895 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CD007_15895 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain CD007_15895 PF17203 CD007_15895 CD007_15900 PF00072 Response regulator receiver domain CD007_15905 PF02608 Basic membrane protein CD007_15910 PF00005 ABC transporter CD007_15915 PF02653 CD007_15915 CD007_15920 PF02653 CD007_15920 CD007_15925 PF03390 CD007_15925 CD007_15935 PF00361 NADH-Ubiquinone/plastoquinone (complex I), various chains CD007_15935 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus CD007_15935 PF13244 CD007_15935 CD007_15940 PF04039 CD007_15940 CD007_15945 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L CD007_15950 PF00361 NADH-Ubiquinone/plastoquinone (complex I), various chains CD007_15955 PF01899 CD007_15955 CD007_15960 PF04066 CD007_15960 CD007_15965 PF03334 CD007_15965 CD007_15970 PF03061 Thioesterase superfamily CD007_15975 PF00072 Response regulator receiver domain CD007_15975 PF00196 Bacterial regulatory proteins, luxR family CD007_15980 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CD007_15980 PF07730 Histidine kinase CD007_15990 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family CD007_15995 PF00857 Isochorismatase family CD007_16000 PF07997 Protein of unknown function (DUF1694) CD007_16005 PF14166 CD007_16005 CD007_16010 PF10676 CD007_16010 CD007_16015 PF01594 CD007_16015 CD007_16020 PF10049 CD007_16020 CD007_16025 PF10842 CD007_16025 CD007_16030 PF01966 HD domain CD007_16035 PF00106 short chain dehydrogenase CD007_16040 PF17355 CD007_16040 CD007_16050 PF01580 FtsK/SpoIIIE family CD007_16050 PF12538 DNA transporter CD007_16055 PF10140 WXG100 protein secretion system (Wss), protein YukC CD007_16060 PF08817 WXG100 protein secretion system (Wss), protein YukD CD007_16065 PF06013 Proteins of 100 residues with WXG CD007_16070 PF06018 CodY GAF-like domain CD007_16070 PF13556 PucR C-terminal helix-turn-helix domain CD007_16075 PF01262 Alanine dehydrogenase/PNT, C-terminal domain CD007_16075 PF05222 Alanine dehydrogenase/PNT, N-terminal domain CD007_16080 PF10042 CD007_16080 CD007_16085 PF03621 MbtH-like protein CD007_16090 PF00501 AMP-binding enzyme CD007_16090 PF00550 Phosphopantetheine attachment site CD007_16090 PF00668 Condensation domain CD007_16090 PF00975 Thioesterase domain CD007_16090 PF13193 AMP-binding enzyme C-terminal domain CD007_16095 PF00550 Phosphopantetheine attachment site CD007_16095 PF00857 Isochorismatase family CD007_16100 PF00501 AMP-binding enzyme CD007_16100 PF13193 AMP-binding enzyme C-terminal domain CD007_16105 PF00425 chorismate binding enzyme CD007_16110 PF00106 short chain dehydrogenase CD007_16115 PF00756 Putative esterase CD007_16120 PF00174 Oxidoreductase molybdopterin binding domain CD007_16125 PF02632 BioY family CD007_16130 PF03553 CD007_16130 CD007_16130 PF13726 CD007_16130 CD007_16135 PF00883 Cytosol aminopeptidase family, catalytic domain CD007_16135 PF02789 Cytosol aminopeptidase family, N-terminal domain CD007_16140 PF02681 CD007_16140 CD007_16145 PF06725 3D domain CD007_16150 PF14068 CD007_16150 CD007_16155 PF17302 CD007_16155 CD007_16160 PF07992 Pyridine nucleotide-disulphide oxidoreductase CD007_16165 PF07992 Pyridine nucleotide-disulphide oxidoreductase CD007_16175 PF00478 IMP dehydrogenase / GMP reductase domain CD007_16180 PF04299 Putative FMN-binding domain CD007_16185 PF00583 Acetyltransferase (GNAT) family CD007_16190 PF01521 Iron-sulphur cluster biosynthesis CD007_16195 PF01678 Diaminopimelate epimerase CD007_16200 PF01773 Na+ dependent nucleoside transporter N-terminus CD007_16200 PF07662 Na+ dependent nucleoside transporter C-terminus CD007_16205 PF07293 CD007_16205 CD007_16210 PF07992 Pyridine nucleotide-disulphide oxidoreductase CD007_16215 PF07315 Protein of unknown function (DUF1462) CD007_16220 PF01106 NifU-like domain CD007_16225 PF00326 Prolyl oligopeptidase family CD007_16225 PF07676 WD40-like Beta Propeller Repeat CD007_16230 PF00288 GHMP kinases N terminal domain CD007_16230 PF08544 GHMP kinases C terminal CD007_16235 PF00291 Pyridoxal-phosphate dependent enzyme CD007_16240 PF00742 Homoserine dehydrogenase CD007_16240 PF01842 ACT domain CD007_16240 PF03447 Homoserine dehydrogenase, NAD binding domain CD007_16250 PF04608 Phosphatidylglycerophosphatase A CD007_16255 PF13242 HAD-hyrolase-like CD007_16255 PF13344 Haloacid dehalogenase-like hydrolase CD007_16260 PF01934 Protein of unknown function DUF86 CD007_16265 PF06265 Protein of unknown function (DUF1027) CD007_16270 PF09580 CD007_16270 CD007_16275 PF04055 Radical SAM superfamily CD007_16275 PF16881 CD007_16275 CD007_16280 PF01551 Peptidase family M23 CD007_16285 PF09560 CD007_16285 CD007_16290 PF08827 Domain of unknown function (DUF1805) CD007_16295 PF02872 5'-nucleotidase, C-terminal domain CD007_16300 PF01925 CD007_16300 CD007_16305 PF01904 Protein of unknown function DUF72 CD007_16315 PF01979 Amidohydrolase family CD007_16320 PF07905 CD007_16320 CD007_16320 PF13556 PucR C-terminal helix-turn-helix domain CD007_16325 PF00860 Permease family CD007_16330 PF00860 Permease family CD007_16335 PF01014 Uricase CD007_16335 PF09349 OHCU decarboxylase CD007_16340 PF00576 HIUase/Transthyretin family CD007_16345 PF09680 CD007_16345 CD007_16350 PF00111 2Fe-2S iron-sulfur cluster binding domain CD007_16350 PF01799 [2Fe-2S] binding domain CD007_16355 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain CD007_16355 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase CD007_16360 PF00941 FAD binding domain in molybdopterin dehydrogenase CD007_16365 PF12804 MobA-like NTP transferase domain CD007_16370 PF02625 XdhC and CoxI family CD007_16370 PF13478 XdhC Rossmann domain CD007_16375 PF00266 Aminotransferase class-V CD007_16380 PF01546 Peptidase family M20/M25/M40 CD007_16385 PF04231 Endonuclease I CD007_16390 PF00005 ABC transporter CD007_16390 PF08402 TOBE domain CD007_16395 PF00392 Bacterial regulatory proteins, gntR family CD007_16395 PF07702 UTRA domain CD007_16400 PF00294 pfkB family carbohydrate kinase CD007_16405 PF00528 Binding-protein-dependent transport system inner membrane component CD007_16410 PF00528 Binding-protein-dependent transport system inner membrane component CD007_16415 PF01547 Bacterial extracellular solute-binding protein CD007_16420 PF01380 SIS domain CD007_16425 PF01541 GIY-YIG catalytic domain CD007_16430 PF01266 FAD dependent oxidoreductase CD007_16445 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CD007_16450 PF12840 Helix-turn-helix domain CD007_16455 PF01458 Uncharacterized protein family (UPF0051) CD007_16460 PF01592 NifU-like N terminal domain CD007_16465 PF00266 Aminotransferase class-V CD007_16470 PF01458 Uncharacterized protein family (UPF0051) CD007_16475 PF00005 ABC transporter CD007_16490 PF02627 Carboxymuconolactone decarboxylase family CD007_16495 PF03180 NLPA lipoprotein CD007_16500 PF00528 Binding-protein-dependent transport system inner membrane component CD007_16505 PF00005 ABC transporter CD007_16505 PF09383 NIL domain CD007_16510 PF02036 SCP-2 sterol transfer family CD007_16515 PF00085 Thioredoxin CD007_16520 PF01751 Toprim domain CD007_16525 PF10830 CD007_16525 CD007_16530 PF01597 Glycine cleavage H-protein CD007_16535 PF03960 ArsC family CD007_16540 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CD007_16540 PF02770 Acyl-CoA dehydrogenase, middle domain CD007_16540 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CD007_16545 PF00108 Thiolase, N-terminal domain CD007_16545 PF02803 Thiolase, C-terminal domain CD007_16550 PF00378 Enoyl-CoA hydratase/isomerase family CD007_16550 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain CD007_16550 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain CD007_16555 PF14115 CD007_16555 CD007_16560 PF01619 Proline dehydrogenase CD007_16570 PF07875 CD007_16570 CD007_16575 PF01047 MarR family CD007_16580 PF07690 Major Facilitator Superfamily CD007_16585 PF14552 Tautomerase enzyme CD007_16595 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CD007_16595 PF03466 LysR substrate binding domain CD007_16600 PF10835 CD007_16600 CD007_16605 PF00005 ABC transporter CD007_16610 PF14039 CD007_16610 CD007_16615 PF01432 Peptidase family M3 CD007_16615 PF08439 Oligopeptidase F CD007_16620 PF00106 short chain dehydrogenase CD007_16625 PF00210 Ferritin-like domain CD007_16630 PF13180 PDZ domain CD007_16630 PF13365 Trypsin-like peptidase domain CD007_16635 PF00072 Response regulator receiver domain CD007_16635 PF00486 Transcriptional regulatory protein, C terminal CD007_16640 PF00512 His Kinase A (phospho-acceptor) domain CD007_16640 PF00672 HAMP domain CD007_16640 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CD007_16650 PF00440 Bacterial regulatory proteins, tetR family CD007_16655 PF00206 Lyase CD007_16655 PF10415 Fumarase C C-terminus CD007_16660 PF13113 CD007_16660 CD007_16665 PF03323 CD007_16665 CD007_16670 PF03845 CD007_16670 CD007_16675 PF05504 Spore germination B3/ GerAC like, C-terminal CD007_16680 PF00072 Response regulator receiver domain CD007_16680 PF00196 Bacterial regulatory proteins, luxR family CD007_16685 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CD007_16685 PF07730 Histidine kinase CD007_16690 PF09922 Cell wall-active antibiotics response protein (DUF2154) CD007_16695 PF13349 CD007_16695 CD007_16700 PF04012 CD007_16700 CD007_16710 PF07690 Major Facilitator Superfamily CD007_16715 PF01923 Cobalamin adenosyltransferase CD007_16720 PF00005 ABC transporter CD007_16725 PF01032 FecCD transport family CD007_16730 PF01497 Periplasmic binding protein CD007_16735 PF00106 short chain dehydrogenase CD007_16740 PF08450 SMP-30/Gluconolaconase/LRE-like region CD007_16745 PF00512 His Kinase A (phospho-acceptor) domain CD007_16745 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CD007_16750 PF00072 Response regulator receiver domain CD007_16750 PF00486 Transcriptional regulatory protein, C terminal CD007_16760 PF04545 Sigma-70, region 4 CD007_16765 PF12841 CD007_16765 CD007_16770 PF00190 Cupin CD007_16775 PF14184 CD007_16775 CD007_16780 PF02687 CD007_16780 CD007_16780 PF12704 MacB-like periplasmic core domain CD007_16785 PF00005 ABC transporter CD007_16790 PF16576 CD007_16790 CD007_16795 PF00005 ABC transporter CD007_16800 PF01032 FecCD transport family CD007_16805 PF01032 FecCD transport family CD007_16810 PF01497 Periplasmic binding protein CD007_16820 PF13520 Amino acid permease CD007_16830 PF09575 CD007_16830 CD007_16835 PF04307 CD007_16835 CD007_16840 PF00884 Sulfatase CD007_16845 PF12727 PBP superfamily domain CD007_16845 PF12728 Helix-turn-helix domain CD007_16850 PF13531 Bacterial extracellular solute-binding protein CD007_16855 PF00528 Binding-protein-dependent transport system inner membrane component CD007_16860 PF00248 Aldo/keto reductase family CD007_16870 PF00999 Sodium/hydrogen exchanger family CD007_16875 PF01077 Nitrite and sulphite reductase 4Fe-4S domain CD007_16875 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain CD007_16880 PF00175 Oxidoreductase NAD-binding domain CD007_16880 PF00258 Flavodoxin CD007_16880 PF00667 FAD binding domain CD007_16885 PF00580 UvrD/REP helicase N-terminal domain CD007_16885 PF13538 UvrD-like helicase C-terminal domain CD007_16895 PF03458 CD007_16895 CD007_16900 PF02600 Disulfide bond formation protein DsbB CD007_16905 PF13462 Thioredoxin CD007_16910 PF00122 E1-E2 ATPase CD007_16910 PF00403 Heavy-metal-associated domain CD007_16910 PF00702 haloacid dehalogenase-like hydrolase CD007_16915 PF00122 E1-E2 ATPase CD007_16915 PF00403 Heavy-metal-associated domain CD007_16915 PF00702 haloacid dehalogenase-like hydrolase CD007_16920 PF00403 Heavy-metal-associated domain CD007_16925 PF02583 Metal-sensitive transcriptional repressor CD007_16930 PF01408 Oxidoreductase family, NAD-binding Rossmann fold CD007_16930 PF02894 Oxidoreductase family, C-terminal alpha/beta domain CD007_16935 PF02525 Flavodoxin-like fold CD007_16940 PF13515 CD007_16940 CD007_16945 PF17314 CD007_16945 CD007_16950 PF00893 Small Multidrug Resistance protein CD007_16955 PF00440 Bacterial regulatory proteins, tetR family CD007_16960 PF00106 short chain dehydrogenase CD007_16985 PF01668 SmpB protein CD007_16990 PF00575 S1 RNA binding domain CD007_16990 PF00773 RNB domain CD007_16990 PF08206 Ribonuclease B OB domain CD007_16995 PF12146 Putative lysophospholipase CD007_17000 PF03840 Preprotein translocase SecG subunit CD007_17005 PF00561 alpha/beta hydrolase fold CD007_17010 PF01381 Helix-turn-helix CD007_17015 PF13560 Helix-turn-helix domain CD007_17020 PF13560 Helix-turn-helix domain CD007_17025 PF01638 HxlR-like helix-turn-helix CD007_17030 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CD007_17030 PF00672 HAMP domain CD007_17030 PF12729 CD007_17030 CD007_17035 PF00512 His Kinase A (phospho-acceptor) domain CD007_17035 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CD007_17040 PF00072 Response regulator receiver domain CD007_17040 PF00486 Transcriptional regulatory protein, C terminal CD007_17045 PF12730 CD007_17045 CD007_17055 PF00005 ABC transporter CD007_17065 PF02052 CD007_17065 CD007_17070 PF05147 Lanthionine synthetase C-like protein CD007_17075 PF00005 ABC transporter CD007_17080 PF04738 CD007_17080 CD007_17080 PF14028 CD007_17080 CD007_17085 PF00528 Binding-protein-dependent transport system inner membrane component CD007_17090 PF04069 Substrate binding domain of ABC-type glycine betaine transport system CD007_17095 PF00528 Binding-protein-dependent transport system inner membrane component CD007_17100 PF00005 ABC transporter CD007_17100 PF00571 CBS domain CD007_17110 PF00528 Binding-protein-dependent transport system inner membrane component CD007_17115 PF04069 Substrate binding domain of ABC-type glycine betaine transport system CD007_17120 PF00528 Binding-protein-dependent transport system inner membrane component CD007_17125 PF00005 ABC transporter CD007_17125 PF00571 CBS domain CD007_17130 PF12802 MarR family CD007_17135 PF01914 CD007_17135 CD007_17140 PF08000 Bacterial PH domain CD007_17140 PF11724 YvbH-like oligomerisation region CD007_17150 PF13240 CD007_17150 CD007_17155 PF00583 Acetyltransferase (GNAT) family CD007_17160 PF00113 Enolase, C-terminal TIM barrel domain CD007_17160 PF03952 Enolase, N-terminal domain CD007_17165 PF01676 Metalloenzyme superfamily CD007_17165 PF06415 BPG-independent PGAM N-terminus (iPGM_N) CD007_17170 PF00121 Triosephosphate isomerase CD007_17175 PF00162 Phosphoglycerate kinase CD007_17180 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain CD007_17180 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain CD007_17185 PF04198 Putative sugar-binding domain CD007_17190 PF00083 Sugar (and other) transporter CD007_17195 PF00392 Bacterial regulatory proteins, gntR family CD007_17195 PF13377 Periplasmic binding protein-like domain CD007_17200 PF00296 Luciferase-like monooxygenase CD007_17210 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CD007_17210 PF03466 LysR substrate binding domain CD007_17215 PF00892 EamA-like transporter family CD007_17220 PF00324 Amino acid permease CD007_17225 PF00704 Glycosyl hydrolases family 18 CD007_17230 PF02589 Uncharacterised ACR, YkgG family COG1556 CD007_17235 PF02589 Uncharacterised ACR, YkgG family COG1556 CD007_17235 PF11870 CD007_17235 CD007_17235 PF13183 4Fe-4S dicluster domain CD007_17240 PF02754 CD007_17240 CD007_17245 PF00072 Response regulator receiver domain CD007_17245 PF00196 Bacterial regulatory proteins, luxR family CD007_17250 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CD007_17250 PF07730 Histidine kinase CD007_17255 PF12698 ABC-2 family transporter protein CD007_17260 PF00005 ABC transporter CD007_17265 PF12697 Alpha/beta hydrolase family CD007_17270 PF07228 Stage II sporulation protein E (SpoIIE) CD007_17270 PF13426 PAS domain CD007_17275 PF07745 Glycosyl hydrolase family 53 CD007_17280 PF02449 Beta-galactosidase CD007_17280 PF08532 Beta-galactosidase trimerisation domain CD007_17280 PF08533 Beta-galactosidase C-terminal domain CD007_17285 PF00528 Binding-protein-dependent transport system inner membrane component CD007_17290 PF00528 Binding-protein-dependent transport system inner membrane component CD007_17295 PF13416 Bacterial extracellular solute-binding protein CD007_17300 PF00356 Bacterial regulatory proteins, lacI family CD007_17300 PF13377 Periplasmic binding protein-like domain CD007_17305 PF00392 Bacterial regulatory proteins, gntR family CD007_17305 PF07729 FCD domain CD007_17310 PF02652 CD007_17310 CD007_17315 PF04552 Sigma-54, DNA binding domain CD007_17320 PF00309 CD007_17320 CD007_17320 PF04552 Sigma-54, DNA binding domain CD007_17320 PF04963 Sigma-54 factor, core binding domain CD007_17325 PF09628 YvfG protein CD007_17330 PF04230 CD007_17330 CD007_17335 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family CD007_17340 PF00132 Bacterial transferase hexapeptide (six repeats) CD007_17345 PF02397 CD007_17345 CD007_17350 PF01943 CD007_17350 CD007_17350 PF14667 Polysaccharide biosynthesis C-terminal domain CD007_17355 PF00535 Glycosyl transferase family 2 CD007_17360 PF04230 CD007_17360 CD007_17365 PF00535 Glycosyl transferase family 2 CD007_17370 PF14897 CD007_17370 CD007_17375 PF00534 Glycosyl transferases group 1 CD007_17375 PF13439 Glycosyltransferase Family 4 CD007_17380 PF00535 Glycosyl transferase family 2 CD007_17385 PF00534 Glycosyl transferases group 1 CD007_17385 PF13439 Glycosyltransferase Family 4 CD007_17390 PF02719 Polysaccharide biosynthesis protein CD007_17390 PF13727 CoA-binding domain CD007_17395 PF13614 AAA domain CD007_17400 PF02706 Chain length determinant protein CD007_17405 PF01381 Helix-turn-helix CD007_17405 PF08671 Anti-repressor SinI CD007_17410 PF00135 Carboxylesterase family CD007_17420 PF05870 Phenolic acid decarboxylase (PAD) CD007_17425 PF11578 Protein of unknown function (DUF3237) CD007_17430 PF01177 Asp/Glu/Hydantoin racemase CD007_17435 PF00144 Beta-lactamase CD007_17435 PF11954 CD007_17435 CD007_17440 PF02435 Levansucrase/Invertase CD007_17445 PF00251 Glycosyl hydrolases family 32 N-terminal domain CD007_17445 PF08244 Glycosyl hydrolases family 32 C terminal CD007_17450 PF13520 Amino acid permease CD007_17455 PF00440 Bacterial regulatory proteins, tetR family CD007_17460 PF00893 Small Multidrug Resistance protein CD007_17465 PF00893 Small Multidrug Resistance protein CD007_17470 PF11553 Protein of unknown function (DUF3231) CD007_17480 PF00574 Clp protease CD007_17485 PF13419 Haloacid dehalogenase-like hydrolase CD007_17490 PF00128 Alpha amylase, catalytic domain CD007_17490 PF16657 CD007_17490 CD007_17495 PF03632 Glycosyl hydrolase family 65 central catalytic domain CD007_17495 PF03633 Glycosyl hydrolase family 65, C-terminal domain CD007_17495 PF03636 Glycosyl hydrolase family 65, N-terminal domain CD007_17500 PF06691 CD007_17500 CD007_17505 PF00528 Binding-protein-dependent transport system inner membrane component CD007_17510 PF00528 Binding-protein-dependent transport system inner membrane component CD007_17515 PF13416 Bacterial extracellular solute-binding protein CD007_17520 PF00128 Alpha amylase, catalytic domain CD007_17520 PF02903 Alpha amylase, N-terminal ig-like domain CD007_17525 PF00356 Bacterial regulatory proteins, lacI family CD007_17525 PF13377 Periplasmic binding protein-like domain CD007_17530 PF03641 Possible lysine decarboxylase CD007_17535 PF03819 MazG nucleotide pyrophosphohydrolase domain CD007_17540 PF00916 CD007_17540 CD007_17540 PF01740 STAS domain CD007_17545 PF00484 Carbonic anhydrase CD007_17550 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CD007_17550 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CD007_17555 PF02687 CD007_17555 CD007_17560 PF00005 ABC transporter CD007_17565 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CD007_17570 PF00072 Response regulator receiver domain CD007_17570 PF00486 Transcriptional regulatory protein, C terminal CD007_17585 PF00797 N-acetyltransferase CD007_17590 PF00381 PTS HPr component phosphorylation site CD007_17595 PF02650 WhiA C-terminal HTH domain CD007_17595 PF10298 WhiA N-terminal LAGLIDADG-like domain CD007_17595 PF14527 WhiA LAGLIDADG-like domain CD007_17600 PF01933 Uncharacterised protein family UPF0052 CD007_17605 PF03668 CD007_17605 CD007_17610 PF00293 NUDIX domain CD007_17615 PF07992 Pyridine nucleotide-disulphide oxidoreductase CD007_17620 PF00877 NlpC/P60 family CD007_17625 PF13432 Tetratricopeptide repeat CD007_17625 PF14559 Tetratricopeptide repeat CD007_17630 PF00005 ABC transporter CD007_17630 PF00664 ABC transporter transmembrane region CD007_17650 PF01502 Phosphoribosyl-AMP cyclohydrolase CD007_17650 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase CD007_17655 PF00977 Histidine biosynthesis protein CD007_17660 PF00977 Histidine biosynthesis protein CD007_17665 PF00117 Glutamine amidotransferase class-I CD007_17670 PF00475 Imidazoleglycerol-phosphate dehydratase CD007_17675 PF00815 Histidinol dehydrogenase CD007_17680 PF01634 ATP phosphoribosyltransferase CD007_17685 PF13393 Histidyl-tRNA synthetase CD007_17690 PF13529 Peptidase_C39 like family CD007_17695 PF03211 Pectate lyase CD007_17700 PF14602 Hexapeptide repeat of succinyl-transferase CD007_17705 PF13419 Haloacid dehalogenase-like hydrolase CD007_17710 PF07670 Nucleoside recognition CD007_17715 PF01790 CD007_17715 CD007_17720 PF02603 HPr Serine kinase N terminus CD007_17720 PF07475 HPr Serine kinase C-terminal domain CD007_17725 PF01979 Amidohydrolase family CD007_17730 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase CD007_17735 PF00392 Bacterial regulatory proteins, gntR family CD007_17735 PF07702 UTRA domain CD007_17740 PF00149 Calcineurin-like phosphoesterase CD007_17745 PF01047 MarR family CD007_17755 PF16715 CD007_17755 CD007_17760 PF01047 MarR family CD007_17765 PF07690 Major Facilitator Superfamily CD007_17770 PF04020 CD007_17770 CD007_17775 PF04024 CD007_17775 CD007_17780 PF13349 CD007_17780 CD007_17800 PF00005 ABC transporter CD007_17805 PF00271 Helicase conserved C-terminal domain CD007_17805 PF02151 UvrB/uvrC motif CD007_17805 PF04851 Type III restriction enzyme, res subunit CD007_17805 PF12344 Ultra-violet resistance protein B CD007_17810 PF09964 CD007_17810 CD007_17815 PF00391 PEP-utilising enzyme, mobile domain CD007_17815 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain CD007_17820 PF00440 Bacterial regulatory proteins, tetR family CD007_17825 PF07690 Major Facilitator Superfamily CD007_17830 PF13180 PDZ domain CD007_17835 PF17423 CD007_17835 CD007_17840 PF01471 Putative peptidoglycan binding domain CD007_17840 PF03572 Peptidase family S41 CD007_17840 PF13180 PDZ domain CD007_17845 PF02687 CD007_17845 CD007_17850 PF00005 ABC transporter CD007_17855 PF13442 Cytochrome C oxidase, cbb3-type, subunit III CD007_17860 PF02588 CD007_17860 CD007_17860 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) CD007_17870 PF01043 SecA preprotein cross-linking domain CD007_17870 PF02810 SEC-C motif CD007_17870 PF07516 SecA Wing and Scaffold domain CD007_17870 PF07517 SecA DEAD-like domain CD007_17875 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein CD007_17875 PF16321 CD007_17875 CD007_17890 PF02561 Flagellar protein FliS CD007_17895 PF02465 CD007_17895 CD007_17895 PF07195 CD007_17895 CD007_17895 PF07196 Flagellin hook IN motif CD007_17900 PF03646 FlaG protein CD007_17905 PF00669 Bacterial flagellin N-terminal helical region CD007_17905 PF00700 Bacterial flagellin C-terminal helical region CD007_17910 PF02599 Global regulator protein family CD007_17915 PF02623 FliW protein CD007_17925 PF00669 Bacterial flagellin N-terminal helical region CD007_17925 PF00700 Bacterial flagellin C-terminal helical region CD007_17930 PF00460 Flagella basal body rod protein CD007_17930 PF06429 Flagellar basal body rod FlgEFG protein C-terminal CD007_17935 PF05130 FlgN protein CD007_17940 PF04316 Anti-sigma-28 factor, FlgM CD007_17955 PF10719 CD007_17955 CD007_17960 PF00271 Helicase conserved C-terminal domain CD007_17960 PF04851 Type III restriction enzyme, res subunit CD007_17965 PF02645 Uncharacterised protein, DegV family COG1307 CD007_17970 PF00072 Response regulator receiver domain CD007_17970 PF00196 Bacterial regulatory proteins, luxR family CD007_17975 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CD007_17975 PF05384 CD007_17975 CD007_17975 PF07730 Histidine kinase CD007_17980 PF01205 Uncharacterized protein family UPF0029 CD007_17980 PF09186 Domain of unknown function (DUF1949) CD007_17985 PF03816 Cell envelope-related transcriptional attenuator domain CD007_17990 PF00953 Glycosyl transferase family 4 CD007_17995 PF13692 Glycosyl transferases group 1 CD007_18000 PF00535 Glycosyl transferase family 2 CD007_18005 PF02706 Chain length determinant protein CD007_18010 PF04932 CD007_18010 CD007_18015 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain CD007_18015 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain CD007_18015 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain CD007_18020 PF00534 Glycosyl transferases group 1 CD007_18020 PF13439 Glycosyltransferase Family 4 CD007_18025 PF01943 CD007_18025 CD007_18025 PF14667 Polysaccharide biosynthesis C-terminal domain CD007_18030 PF02397 CD007_18030 CD007_18035 PF00535 Glycosyl transferase family 2 CD007_18040 PF01520 N-acetylmuramoyl-L-alanine amidase CD007_18040 PF04122 CD007_18040 CD007_18045 PF04122 CD007_18045 CD007_18045 PF08486 CD007_18045 CD007_18055 PF03816 Cell envelope-related transcriptional attenuator domain CD007_18060 PF02350 UDP-N-acetylglucosamine 2-epimerase CD007_18065 PF00535 Glycosyl transferase family 2 CD007_18070 PF00534 Glycosyl transferases group 1 CD007_18075 PF09318 Domain of unknown function (DUF1975) CD007_18080 PF00483 Nucleotidyl transferase CD007_18085 PF00005 ABC transporter CD007_18090 PF01061 CD007_18090 CD007_18095 PF00535 Glycosyl transferase family 2 CD007_18095 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase CD007_18100 PF00535 Glycosyl transferase family 2 CD007_18105 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase CD007_18110 PF01467 Cytidylyltransferase CD007_18115 PF03808 CD007_18115 CD007_18120 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase CD007_18125 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase CD007_18130 PF08240 Alcohol dehydrogenase GroES-like domain CD007_18130 PF16912 CD007_18130 CD007_18135 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase CD007_18140 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase CD007_18145 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase CD007_18145 PF08239 Bacterial SH3 domain CD007_18150 PF01238 Phosphomannose isomerase type I CD007_18155 PF03323 CD007_18155 CD007_18160 PF03845 CD007_18160 CD007_18165 PF05504 Spore germination B3/ GerAC like, C-terminal CD007_18170 PF00083 Sugar (and other) transporter CD007_18175 PF03816 Cell envelope-related transcriptional attenuator domain CD007_18180 PF08282 haloacid dehalogenase-like hydrolase CD007_18185 PF00877 NlpC/P60 family CD007_18195 PF09587 Bacterial capsule synthesis protein PGA_cap CD007_18200 PF14102 CD007_18200 CD007_18205 PF08245 Mur ligase middle domain CD007_18210 PF00356 Bacterial regulatory proteins, lacI family CD007_18210 PF13377 Periplasmic binding protein-like domain CD007_18215 PF00294 pfkB family carbohydrate kinase CD007_18220 PF05025 RbsD / FucU transport protein family CD007_18225 PF00005 ABC transporter CD007_18230 PF02653 CD007_18230 CD007_18235 PF13407 Periplasmic binding protein domain CD007_18240 PF08239 Bacterial SH3 domain CD007_18245 PF13031 CD007_18245 CD007_18250 PF02525 Flavodoxin-like fold CD007_18255 PF03306 Alpha-acetolactate decarboxylase CD007_18260 PF00205 Thiamine pyrophosphate enzyme, central domain CD007_18260 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CD007_18260 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CD007_18265 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CD007_18265 PF03466 LysR substrate binding domain CD007_18270 PF02040 CD007_18270 CD007_18275 PF10842 CD007_18275 CD007_18285 PF08757 CD007_18285 CD007_18295 PF01613 Flavin reductase like domain CD007_18300 PF13789 CD007_18300 CD007_18305 PF01019 Gamma-glutamyltranspeptidase CD007_18310 PF01037 AsnC family CD007_18310 PF13404 AsnC-type helix-turn-helix domain CD007_18315 PF02417 CD007_18315 CD007_18320 PF02417 CD007_18320 CD007_18325 PF04493 Endonuclease V CD007_18335 PF04740 CD007_18335 CD007_18335 PF14449 CD007_18335 CD007_18340 PF17279 CD007_18340 CD007_18345 PF16888 CD007_18345 CD007_18355 PF09234 Domain of unknown function (DUF1963) CD007_18360 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain CD007_18360 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain CD007_18360 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain CD007_18370 PF13614 AAA domain CD007_18375 PF02706 Chain length determinant protein CD007_18375 PF13807 CD007_18375 CD007_18385 PF04434 CD007_18385 CD007_18390 PF00176 SNF2 family N-terminal domain CD007_18390 PF00271 Helicase conserved C-terminal domain CD007_18390 PF12419 CD007_18390 CD007_18400 PF08282 haloacid dehalogenase-like hydrolase CD007_18405 PF00455 CD007_18405 CD007_18405 PF08220 DeoR-like helix-turn-helix domain CD007_18410 PF00436 Single-strand binding protein family CD007_18420 PF14183 CD007_18420 CD007_18425 PF04203 Sortase family CD007_18430 PF00746 CD007_18430 CD007_18430 PF05737 Collagen binding domain CD007_18435 PF00072 Response regulator receiver domain CD007_18435 PF00486 Transcriptional regulatory protein, C terminal CD007_18455 PF01741 Large-conductance mechanosensitive channel, MscL CD007_18460 PF07977 FabA-like domain CD007_18465 PF13424 Tetratricopeptide repeat CD007_18470 PF00460 Flagella basal body rod protein CD007_18470 PF06429 Flagellar basal body rod FlgEFG protein C-terminal CD007_18475 PF00460 Flagella basal body rod protein CD007_18475 PF06429 Flagellar basal body rod FlgEFG protein C-terminal CD007_18480 PF06723 MreB/Mbl protein CD007_18485 PF12116 Stage III sporulation protein D CD007_18495 PF01047 MarR family CD007_18500 PF07690 Major Facilitator Superfamily CD007_18505 PF13229 Right handed beta helix region CD007_18510 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin CD007_18515 PF07690 Major Facilitator Superfamily CD007_18520 PF00857 Isochorismatase family CD007_18530 PF00909 Ammonium Transporter Family CD007_18535 PF00543 Nitrogen regulatory protein P-II CD007_18540 PF01569 PAP2 superfamily CD007_18545 PF04892 CD007_18545 CD007_18550 PF01551 Peptidase family M23 CD007_18555 PF00583 Acetyltransferase (GNAT) family CD007_18560 PF17319 CD007_18560 CD007_18565 PF17370 CD007_18565 CD007_18570 PF13091 PLD-like domain CD007_18570 PF13396 CD007_18570 CD007_18575 PF07739 TipAS antibiotic-recognition domain CD007_18575 PF13411 MerR HTH family regulatory protein CD007_18580 PF17319 CD007_18580 CD007_18585 PF13460 NADH(P)-binding CD007_18590 PF02082 Transcriptional regulator CD007_18595 PF00449 Urease alpha-subunit, N-terminal domain CD007_18595 PF01979 Amidohydrolase family CD007_18600 PF00699 Urease beta subunit CD007_18605 PF00547 Urease, gamma subunit CD007_18620 PF05532 CsbD-like CD007_18630 PF13181 Tetratricopeptide repeat CD007_18630 PF13424 Tetratricopeptide repeat CD007_18640 PF04055 Radical SAM superfamily CD007_18640 PF06463 Molybdenum Cofactor Synthesis C CD007_18640 PF13353 4Fe-4S single cluster domain CD007_18645 PF02634 FdhD/NarQ family CD007_18655 PF00092 von Willebrand factor type A domain CD007_18665 PF00092 von Willebrand factor type A domain CD007_18670 PF08486 CD007_18670 CD007_18675 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) CD007_18680 PF08680 Protein of unknown function (DUF1779) CD007_18685 PF06612 CD007_18685 CD007_18695 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain CD007_18695 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain CD007_18700 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CD007_18700 PF02874 ATP synthase alpha/beta family, beta-barrel domain CD007_18705 PF00231 ATP synthase CD007_18710 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CD007_18710 PF00306 ATP synthase alpha/beta chain, C terminal domain CD007_18710 PF02874 ATP synthase alpha/beta family, beta-barrel domain CD007_18715 PF00213 ATP synthase delta (OSCP) subunit CD007_18720 PF00430 ATP synthase B/B' CF(0) CD007_18725 PF00137 ATP synthase subunit C CD007_18730 PF00119 ATP synthase A chain CD007_18735 PF03899 CD007_18735 CD007_18740 PF14681 Uracil phosphoribosyltransferase CD007_18745 PF00464 Serine hydroxymethyltransferase CD007_18750 PF04260 Protein of unknown function (DUF436) CD007_18755 PF02502 Ribose/Galactose Isomerase CD007_18760 PF01451 Low molecular weight phosphotyrosine protein phosphatase CD007_18765 PF02659 CD007_18765 CD007_18770 PF01300 Telomere recombination CD007_18770 PF03481 Putative GTP-binding controlling metal-binding CD007_18780 PF09551 CD007_18780 CD007_18785 PF17094 CD007_18785 CD007_18790 PF17247 CD007_18790 CD007_18795 PF13847 Methyltransferase domain CD007_18800 PF00472 RF-1 domain CD007_18800 PF03462 PCRF domain CD007_18805 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CD007_18810 PF13411 MerR HTH family regulatory protein CD007_18815 PF03547 CD007_18815 CD007_18820 PF00390 Malic enzyme, N-terminal domain CD007_18820 PF03949 Malic enzyme, NAD binding domain CD007_18825 PF00265 Thymidine kinase CD007_18830 PF01197 Ribosomal protein L31 CD007_18835 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CD007_18835 PF07497 Rho termination factor, RNA-binding domain CD007_18835 PF07498 Rho termination factor, N-terminal domain CD007_18840 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded CD007_18845 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) CD007_18850 PF00923 Transaldolase CD007_18855 PF01116 Fructose-bisphosphate aldolase class-II CD007_18860 PF00072 Response regulator receiver domain CD007_18865 PF10740 Protein of unknown function (DUF2529) CD007_18870 PF00117 Glutamine amidotransferase class-I CD007_18870 PF06418 CTP synthase N-terminus CD007_18875 PF05066 HB1, ASXL, restriction endonuclease HTH domain CD007_18880 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CD007_18880 PF02770 Acyl-CoA dehydrogenase, middle domain CD007_18880 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CD007_18885 PF02754 CD007_18885 CD007_18885 PF13183 4Fe-4S dicluster domain CD007_18890 PF13091 PLD-like domain CD007_18895 PF03851 UV-endonuclease UvdE CD007_18905 PF01872 RibD C-terminal domain CD007_18910 PF00005 ABC transporter CD007_18910 PF00664 ABC transporter transmembrane region CD007_18915 PF13091 PLD-like domain CD007_18915 PF13396 CD007_18915 CD007_18925 PF02665 Nitrate reductase gamma subunit CD007_18930 PF02613 Nitrate reductase delta subunit CD007_18935 PF13247 4Fe-4S dicluster domain CD007_18935 PF14711 Respiratory nitrate reductase beta C-terminal CD007_18940 PF00384 Molybdopterin oxidoreductase CD007_18940 PF01568 Molydopterin dinucleotide binding domain CD007_18940 PF14710 Respiratory nitrate reductase alpha N-terminal CD007_18950 PF14256 CD007_18950 CD007_18955 PF00027 Cyclic nucleotide-binding domain CD007_18955 PF13545 Crp-like helix-turn-helix domain CD007_18960 PF07690 Major Facilitator Superfamily CD007_18965 PF00750 tRNA synthetases class I (R) CD007_18965 PF03485 Arginyl tRNA synthetase N terminal domain CD007_18965 PF05746 DALR anticodon binding domain CD007_18970 PF09148 Domain of unknown function (DUF1934) CD007_18975 PF11420 Bacteriocin subtilosin A CD007_18985 PF04055 Radical SAM superfamily CD007_18985 PF05402 Coenzyme PQQ synthesis protein D (PqqD) CD007_18985 PF13186 Iron-sulfur cluster-binding domain CD007_18995 PF00005 ABC transporter CD007_19005 PF05193 Peptidase M16 inactive domain CD007_19010 PF00675 Insulinase (Peptidase family M16) CD007_19035 PF13424 Tetratricopeptide repeat CD007_19040 PF11131 CD007_19040 CD007_19065 PF00005 ABC transporter CD007_19075 PF00491 Arginase family CD007_19080 PF01564 Spermine/spermidine synthase CD007_19080 PF17284 CD007_19080 CD007_19085 PF00905 Penicillin binding protein transpeptidase domain CD007_19085 PF00912 Transglycosylase CD007_19095 PF08741 CD007_19095 CD007_19100 PF02163 Peptidase family M50 CD007_19105 PF01361 Tautomerase enzyme CD007_19110 PF01047 MarR family CD007_19115 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CD007_19115 PF02824 TGS domain CD007_19115 PF03129 Anticodon binding domain CD007_19115 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain CD007_19125 PF02082 Transcriptional regulator CD007_19135 PF01966 HD domain CD007_19140 PF07293 CD007_19140 CD007_19150 PF00892 EamA-like transporter family CD007_19155 PF03099 Biotin/lipoate A/B protein ligase family CD007_19160 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CD007_19160 PF03466 LysR substrate binding domain CD007_19165 PF01515 Phosphate acetyl/butaryl transferase CD007_19170 PF06778 Chlorite dismutase CD007_19175 PF13561 Enoyl-(Acyl carrier protein) reductase CD007_19180 PF00155 Aminotransferase class I and II CD007_19185 PF07690 Major Facilitator Superfamily CD007_19190 PF13535 ATP-grasp domain CD007_19195 PF13561 Enoyl-(Acyl carrier protein) reductase CD007_19200 PF07883 Cupin domain CD007_19210 PF07690 Major Facilitator Superfamily CD007_19215 PF00324 Amino acid permease CD007_19220 PF01546 Peptidase family M20/M25/M40 CD007_19225 PF00171 Aldehyde dehydrogenase family CD007_19230 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase CD007_19230 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain CD007_19240 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase CD007_19245 PF04321 RmlD substrate binding domain CD007_19250 PF16363 CD007_19250 CD007_19255 PF00483 Nucleotidyl transferase CD007_19260 PF04101 Glycosyltransferase family 28 C-terminal domain CD007_19265 PF02348 Cytidylyltransferase CD007_19270 PF03102 NeuB family CD007_19270 PF08666 SAF domain CD007_19275 PF00583 Acetyltransferase (GNAT) family CD007_19280 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family CD007_19285 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase CD007_19290 PF00535 Glycosyl transferase family 2 CD007_19300 PF09671 CD007_19300 CD007_19305 PF04241 CD007_19305 CD007_19310 PF00860 Permease family CD007_19315 PF17261 CD007_19315 CD007_19320 PF00171 Aldehyde dehydrogenase family CD007_19325 PF03167 Uracil DNA glycosylase superfamily CD007_19330 PF00535 Glycosyl transferase family 2 CD007_19345 PF03551 Transcriptional regulator PadR-like family CD007_19350 PF08543 Phosphomethylpyrimidine kinase CD007_19360 PF00251 Glycosyl hydrolases family 32 N-terminal domain CD007_19360 PF08244 Glycosyl hydrolases family 32 C terminal CD007_19365 PF00367 phosphotransferase system, EIIB CD007_19365 PF02378 Phosphotransferase system, EIIC CD007_19370 PF01226 Formate/nitrite transporter CD007_19375 PF00874 PRD domain CD007_19375 PF03123 CAT RNA binding domain CD007_19385 PF00082 Subtilase family CD007_19385 PF02225 PA domain CD007_19385 PF05922 Peptidase inhibitor I9 CD007_19385 PF13860 FlgD Ig-like domain CD007_19390 PF00296 Luciferase-like monooxygenase CD007_19395 PF00881 Nitroreductase family CD007_19400 PF01098 CD007_19400 CD007_19405 PF17368 CD007_19405 CD007_19410 PF03626 CD007_19410 CD007_19415 PF00510 Cytochrome c oxidase subunit III CD007_19420 PF00115 Cytochrome C and Quinol oxidase polypeptide I CD007_19425 PF00116 Cytochrome C oxidase subunit II, periplasmic domain CD007_19425 PF02790 Cytochrome C oxidase subunit II, transmembrane domain CD007_19430 PF04226 CD007_19430 CD007_19435 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain CD007_19435 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain CD007_19440 PF00288 GHMP kinases N terminal domain CD007_19440 PF08544 GHMP kinases C terminal CD007_19440 PF10509 Galactokinase galactose-binding signature CD007_19445 PF04138 CD007_19445 CD007_19450 PF00440 Bacterial regulatory proteins, tetR family CD007_19455 PF08671 Anti-repressor SinI CD007_19460 PF04341 CD007_19460 CD007_19465 PF00474 Sodium:solute symporter family CD007_19470 PF01323 DSBA-like thioredoxin domain CD007_19475 PF04261 Dyp-type peroxidase family CD007_19475 PF10518 TAT (twin-arginine translocation) pathway signal sequence CD007_19480 PF09375 Imelysin CD007_19485 PF03239 CD007_19485 CD007_19490 PF02581 Thiamine monophosphate synthase/TENI CD007_19495 PF02110 Hydroxyethylthiazole kinase family CD007_19500 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CD007_19500 PF03466 LysR substrate binding domain CD007_19505 PF03788 CD007_19505 CD007_19510 PF04172 CD007_19510 CD007_19515 PF12832 MFS_1 like family CD007_19520 PF09962 CD007_19520 CD007_19525 PF10672 S-adenosylmethionine-dependent methyltransferase CD007_19530 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CD007_19545 PF02378 Phosphotransferase system, EIIC CD007_19550 PF00082 Subtilase family CD007_19555 PF00367 phosphotransferase system, EIIB CD007_19555 PF02378 Phosphotransferase system, EIIC CD007_19560 PF00874 PRD domain CD007_19560 PF03123 CAT RNA binding domain CD007_19565 PF01501 Glycosyl transferase family 8 CD007_19570 PF09529 CD007_19570 CD007_19575 PF01047 MarR family CD007_19580 PF00579 tRNA synthetases class I (W and Y) CD007_19580 PF01479 S4 domain CD007_19585 PF02225 PA domain CD007_19585 PF04389 Peptidase family M28 CD007_19590 PF13560 Helix-turn-helix domain CD007_19595 PF02627 Carboxymuconolactone decarboxylase family CD007_19600 PF07690 Major Facilitator Superfamily CD007_19605 PF04607 Region found in RelA / SpoT proteins CD007_19610 PF01040 UbiA prenyltransferase family CD007_19620 PF12459 CD007_19620 CD007_19625 PF00501 AMP-binding enzyme CD007_19625 PF13193 AMP-binding enzyme C-terminal domain CD007_19630 PF03062 CD007_19630 CD007_19635 PF00550 Phosphopantetheine attachment site CD007_19640 PF04914 DltD C-terminal region CD007_19645 PF00106 short chain dehydrogenase CD007_19650 PF01063 Aminotransferase class IV CD007_19655 PF02056 Family 4 glycosyl hydrolase CD007_19655 PF11975 Family 4 glycosyl hydrolase C-terminal domain CD007_19660 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit CD007_19665 PF02378 Phosphotransferase system, EIIC CD007_19670 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CD007_19675 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CD007_19675 PF00874 PRD domain CD007_19675 PF05043 Mga helix-turn-helix domain CD007_19675 PF08279 HTH domain CD007_19685 PF02245 Methylpurine-DNA glycosylase (MPG) CD007_19690 PF00199 Catalase CD007_19690 PF06628 Catalase-related immune-responsive CD007_19695 PF07690 Major Facilitator Superfamily CD007_19700 PF12679 CD007_19700 CD007_19705 PF00005 ABC transporter CD007_19705 PF13732 CD007_19705 CD007_19710 PF13396 CD007_19710 CD007_19720 PF17280 CD007_19720 CD007_19725 PF04542 Sigma-70 region 2 CD007_19725 PF08281 Sigma-70, region 4 CD007_19730 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin CD007_19735 PF01256 Carbohydrate kinase CD007_19740 PF00005 ABC transporter CD007_19740 PF00664 ABC transporter transmembrane region CD007_19745 PF00005 ABC transporter CD007_19745 PF00664 ABC transporter transmembrane region CD007_19750 PF02322 CD007_19750 CD007_19755 PF01654 CD007_19755 CD007_19760 PF03390 CD007_19760 CD007_19765 PF01435 Peptidase family M48 CD007_19775 PF01522 Polysaccharide deacetylase CD007_19790 PF00005 ABC transporter CD007_19790 PF03459 TOBE domain CD007_19795 PF13556 PucR C-terminal helix-turn-helix domain CD007_19800 PF00171 Aldehyde dehydrogenase family CD007_19805 PF02588 CD007_19805 CD007_19805 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) CD007_19810 PF11611 Domain of unknown function (DUF4352) CD007_19815 PF16363 CD007_19815 CD007_19820 PF01161 Phosphatidylethanolamine-binding protein CD007_19825 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CD007_19825 PF03466 LysR substrate binding domain CD007_19830 PF07301 CD007_19830 CD007_19835 PF07730 Histidine kinase CD007_19840 PF00072 Response regulator receiver domain CD007_19840 PF00196 Bacterial regulatory proteins, luxR family CD007_19845 PF01546 Peptidase family M20/M25/M40 CD007_19845 PF07687 Peptidase dimerisation domain CD007_19855 PF04525 Tubby C 2 CD007_19860 PF01717 Cobalamin-independent synthase, Catalytic domain CD007_19865 PF01717 Cobalamin-independent synthase, Catalytic domain CD007_19870 PF00106 short chain dehydrogenase CD007_19875 PF01144 Coenzyme A transferase CD007_19880 PF01144 Coenzyme A transferase CD007_19890 PF08241 Methyltransferase domain CD007_19895 PF01773 Na+ dependent nucleoside transporter N-terminus CD007_19895 PF07662 Na+ dependent nucleoside transporter C-terminus CD007_19900 PF11738 Protein of unknown function (DUF3298) CD007_19900 PF13739 Domain of unknown function (DUF4163) CD007_19910 PF00199 Catalase CD007_19910 PF01965 DJ-1/PfpI family CD007_19910 PF06628 Catalase-related immune-responsive CD007_19915 PF03600 Citrate transporter CD007_19920 PF00722 Glycosyl hydrolases family 16 CD007_19925 PF00874 PRD domain CD007_19925 PF03123 CAT RNA binding domain CD007_19935 PF11700 CD007_19935 CD007_19940 PF00270 DEAD/DEAH box helicase CD007_19940 PF00271 Helicase conserved C-terminal domain CD007_19940 PF03880 DbpA RNA binding domain CD007_19945 PF13472 GDSL-like Lipase/Acylhydrolase family CD007_19960 PF14176 CD007_19960 CD007_19965 PF10898 CD007_19965 CD007_19990 PF05593 CD007_19990 CD007_19995 PF00892 EamA-like transporter family CD007_20000 PF00582 Universal stress protein family CD007_20005 PF00232 Glycosyl hydrolase family 1 CD007_20010 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 CD007_20010 PF00367 phosphotransferase system, EIIB CD007_20010 PF02378 Phosphotransferase system, EIIC CD007_20030 PF13780 CD007_20030 CD007_20045 PF17279 CD007_20045 CD007_20050 PF16888 CD007_20050 CD007_20055 PF04616 Glycosyl hydrolases family 43 CD007_20055 PF16369 CD007_20055 CD007_20060 PF09021 HutP CD007_20065 PF00221 Aromatic amino acid lyase CD007_20070 PF01175 Urocanase CD007_20070 PF17391 CD007_20070 CD007_20070 PF17392 CD007_20070 CD007_20075 PF01979 Amidohydrolase family CD007_20080 PF00491 Arginase family CD007_20085 PF00324 Amino acid permease CD007_20090 PF00591 Glycosyl transferase family, a/b domain CD007_20090 PF02885 Glycosyl transferase family, helical bundle domain CD007_20090 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain CD007_20095 PF01773 Na+ dependent nucleoside transporter N-terminus CD007_20095 PF07662 Na+ dependent nucleoside transporter C-terminus CD007_20100 PF01791 DeoC/LacD family aldolase CD007_20105 PF04198 Putative sugar-binding domain CD007_20105 PF13384 Homeodomain-like domain CD007_20110 PF06724 CD007_20110 CD007_20115 PF04346 CD007_20115 CD007_20120 PF03972 MmgE/PrpD family CD007_20125 PF01546 Peptidase family M20/M25/M40 CD007_20125 PF07687 Peptidase dimerisation domain CD007_20130 PF00005 ABC transporter CD007_20135 PF00528 Binding-protein-dependent transport system inner membrane component CD007_20140 PF00497 Bacterial extracellular solute-binding proteins, family 3 CD007_20145 PF00583 Acetyltransferase (GNAT) family CD007_20150 PF00296 Luciferase-like monooxygenase CD007_20155 PF02275 Linear amide C-N hydrolases, choloylglycine hydrolase family CD007_20160 PF08282 haloacid dehalogenase-like hydrolase CD007_20170 PF11631 Protein of unknown function (DUF3255) CD007_20190 PF01497 Periplasmic binding protein CD007_20195 PF06486 Protein of unknown function (DUF1093) CD007_20200 PF02687 CD007_20200 CD007_20205 PF00005 ABC transporter CD007_20210 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CD007_20215 PF00072 Response regulator receiver domain CD007_20215 PF00486 Transcriptional regulatory protein, C terminal CD007_20220 PF01116 Fructose-bisphosphate aldolase class-II CD007_20225 PF01261 Xylose isomerase-like TIM barrel CD007_20230 PF01261 Xylose isomerase-like TIM barrel CD007_20235 PF01408 Oxidoreductase family, NAD-binding Rossmann fold CD007_20235 PF02894 Oxidoreductase family, C-terminal alpha/beta domain CD007_20240 PF07690 Major Facilitator Superfamily CD007_20245 PF01261 Xylose isomerase-like TIM barrel CD007_20250 PF00205 Thiamine pyrophosphate enzyme, central domain CD007_20250 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CD007_20250 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CD007_20255 PF00294 pfkB family carbohydrate kinase CD007_20260 PF04962 KduI/IolB family CD007_20265 PF00171 Aldehyde dehydrogenase family CD007_20270 PF00455 CD007_20270 CD007_20270 PF08220 DeoR-like helix-turn-helix domain CD007_20275 PF00248 Aldo/keto reductase family CD007_20285 PF10850 CD007_20285 CD007_20290 PF00083 Sugar (and other) transporter CD007_20295 PF00183 Hsp90 protein CD007_20295 PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CD007_20305 PF13561 Enoyl-(Acyl carrier protein) reductase CD007_20310 PF10439 CD007_20310 CD007_20315 PF10439 CD007_20315 CD007_20320 PF00005 ABC transporter CD007_20320 PF00664 ABC transporter transmembrane region CD007_20320 PF03412 Peptidase C39 family CD007_20325 PF13437 HlyD family secretion protein CD007_20325 PF13533 Biotin-lipoyl like CD007_20335 PF00440 Bacterial regulatory proteins, tetR family CD007_20340 PF00171 Aldehyde dehydrogenase family CD007_20345 PF06271 CD007_20345 CD007_20350 PF01011 PQQ enzyme repeat CD007_20350 PF13360 PQQ-like domain CD007_20355 PF17369 CD007_20355 CD007_20360 PF06271 CD007_20360 CD007_20365 PF04235 CD007_20365 CD007_20370 PF07883 Cupin domain CD007_20375 PF00440 Bacterial regulatory proteins, tetR family CD007_20380 PF00106 short chain dehydrogenase CD007_20385 PF01047 MarR family CD007_20390 PF03788 CD007_20390 CD007_20395 PF04172 CD007_20395 CD007_20400 PF04230 CD007_20400 CD007_20405 PF02595 Glycerate kinase family CD007_20410 PF00392 Bacterial regulatory proteins, gntR family CD007_20410 PF07729 FCD domain CD007_20415 PF00370 FGGY family of carbohydrate kinases, N-terminal domain CD007_20415 PF02782 FGGY family of carbohydrate kinases, C-terminal domain CD007_20420 PF02447 CD007_20420 CD007_20425 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain CD007_20425 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase CD007_20430 PF00578 AhpC/TSA family CD007_20430 PF10417 C-terminal domain of 1-Cys peroxiredoxin CD007_20435 PF07992 Pyridine nucleotide-disulphide oxidoreductase CD007_20435 PF13192 Thioredoxin domain CD007_20440 PF04230 CD007_20440 CD007_20455 PF00367 phosphotransferase system, EIIB CD007_20460 PF00392 Bacterial regulatory proteins, gntR family CD007_20460 PF07702 UTRA domain CD007_20475 PF00005 ABC transporter CD007_20485 PF04055 Radical SAM superfamily CD007_20485 PF13394 4Fe-4S single cluster domain CD007_20495 PF06874 CD007_20495 CD007_20505 PF02590 Predicted SPOUT methyltransferase CD007_20510 PF14116 CD007_20510 CD007_20520 PF00107 Zinc-binding dehydrogenase CD007_20520 PF08240 Alcohol dehydrogenase GroES-like domain CD007_20530 PF10852 CD007_20530 CD007_20545 PF00583 Acetyltransferase (GNAT) family CD007_20550 PF13424 Tetratricopeptide repeat CD007_20560 PF00491 Arginase family CD007_20565 PF00324 Amino acid permease CD007_20570 PF00202 Aminotransferase class-III CD007_20575 PF00158 Sigma-54 interaction domain CD007_20575 PF02954 Bacterial regulatory protein, Fis family CD007_20575 PF13426 PAS domain CD007_20580 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CD007_20585 PF13180 PDZ domain CD007_20585 PF13365 Trypsin-like peptidase domain CD007_20590 PF00753 Metallo-beta-lactamase superfamily CD007_20595 PF09648 YycH protein CD007_20600 PF07435 YycH protein CD007_20605 PF00512 His Kinase A (phospho-acceptor) domain CD007_20605 PF00672 HAMP domain CD007_20605 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CD007_20605 PF13426 PAS domain CD007_20610 PF00072 Response regulator receiver domain CD007_20610 PF00486 Transcriptional regulatory protein, C terminal CD007_20635 PF00709 Adenylosuccinate synthetase CD007_20640 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CD007_20645 PF00772 DnaB-like helicase N terminal domain CD007_20645 PF03796 DnaB-like helicase C terminal domain CD007_20650 PF09954 CD007_20650 CD007_20660 PF14174 CD007_20660 CD007_20665 PF07690 Major Facilitator Superfamily CD007_20670 PF13231 CD007_20670 CD007_20675 PF01281 Ribosomal protein L9, N-terminal domain CD007_20675 PF03948 Ribosomal protein L9, C-terminal domain CD007_20680 PF01368 DHH family CD007_20680 PF02272 DHHA1 domain CD007_20685 PF09991 CD007_20685 CD007_20695 PF07875 CD007_20695 CD007_20700 PF01638 HxlR-like helix-turn-helix CD007_20705 PF01368 DHH family CD007_20705 PF02833 DHHA2 domain CD007_20720 PF07690 Major Facilitator Superfamily CD007_20725 PF07739 TipAS antibiotic-recognition domain CD007_20725 PF13411 MerR HTH family regulatory protein CD007_20735 PF13474 SnoaL-like domain CD007_20740 PF00753 Metallo-beta-lactamase superfamily CD007_20745 PF01047 MarR family CD007_20750 PF13673 Acetyltransferase (GNAT) domain CD007_20760 PF00583 Acetyltransferase (GNAT) family CD007_20765 PF04237 YjbR CD007_20770 PF01872 RibD C-terminal domain CD007_20785 PF13411 MerR HTH family regulatory protein CD007_20790 PF00892 EamA-like transporter family CD007_20795 PF03190 Protein of unknown function, DUF255 CD007_20795 PF07221 N-acylglucosamine 2-epimerase (GlcNAc 2-epimerase) CD007_20800 PF02517 CAAX protease self-immunity CD007_20805 PF00083 Sugar (and other) transporter CD007_20810 PF12464 Maltose acetyltransferase CD007_20810 PF14602 Hexapeptide repeat of succinyl-transferase CD007_20815 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CD007_20820 PF00356 Bacterial regulatory proteins, lacI family CD007_20820 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family CD007_20825 PF03372 Endonuclease/Exonuclease/phosphatase family CD007_20830 PF01084 Ribosomal protein S18 CD007_20835 PF00436 Single-strand binding protein family CD007_20840 PF01250 Ribosomal protein S6 CD007_20845 PF01926 50S ribosome-binding GTPase CD007_20845 PF06071 Protein of unknown function (DUF933) CD007_20850 PF00384 Molybdopterin oxidoreductase CD007_20850 PF01568 Molydopterin dinucleotide binding domain CD007_20850 PF04879 Molybdopterin oxidoreductase Fe4S4 domain CD007_20855 PF06107 CD007_20855 CD007_20865 PF06866 CD007_20865 CD007_20870 PF02195 ParB-like nuclease domain CD007_20875 PF13614 AAA domain CD007_20880 PF06713 CD007_20880 CD007_20885 PF02195 ParB-like nuclease domain CD007_20890 PF02527 rRNA small subunit methyltransferase G CD007_20895 PF01134 Glucose inhibited division protein A CD007_20895 PF13932 GidA associated domain 3 CD007_20900 PF01926 50S ribosome-binding GTPase CD007_20900 PF10396 GTP-binding protein TrmE N-terminus CD007_20900 PF12631 Catalytic cysteine-containing C-terminus of GTPase, MnmE CD007_20905 PF01424 R3H domain CD007_20905 PF13083 KH domain CD007_20905 PF14804 Jag N-terminus CD007_20910 PF02096 60Kd inner membrane protein CD007_20915 PF00825 Ribonuclease P CD007_20920 PF00468 Ribosomal protein L34