locus-tag class description JNE32_00005 PF00308 Bacterial dnaA protein JNE32_00005 PF08299 Bacterial dnaA protein helix-turn-helix JNE32_00005 PF11638 DnaA N-terminal domain JNE32_00010 PF00712 DNA polymerase III beta subunit, N-terminal domain JNE32_00010 PF02767 DNA polymerase III beta subunit, central domain JNE32_00010 PF02768 DNA polymerase III beta subunit, C-terminal domain JNE32_00020 PF02463 RecF/RecN/SMC N terminal domain JNE32_00025 PF04025 Domain of unknown function (DUF370) JNE32_00030 PF00204 DNA gyrase B JNE32_00030 PF00986 DNA gyrase B subunit, carboxyl terminus JNE32_00030 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JNE32_00030 PF01751 Toprim domain JNE32_00035 PF03989 DNA gyrase C-terminal domain, beta-propeller JNE32_00035 PF00521 DNA gyrase/topoisomerase IV, subunit A JNE32_00070 PF00571 CBS domain JNE32_00070 PF00478 IMP dehydrogenase / GMP reductase domain JNE32_00075 PF00768 D-alanyl-D-alanine carboxypeptidase JNE32_00075 PF07943 Penicillin-binding protein 5, C-terminal domain JNE32_00080 PF01680 SOR/SNZ family JNE32_00085 PF01174 SNO glutamine amidotransferase family JNE32_00090 PF02403 Seryl-tRNA synthetase N-terminal domain JNE32_00090 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) JNE32_00100 PF01712 Deoxynucleoside kinase JNE32_00105 PF01712 Deoxynucleoside kinase JNE32_00110 PF01476 LysM domain JNE32_00110 PF00704 Glycosyl hydrolases family 18 JNE32_00115 PF00857 Isochorismatase family JNE32_00120 PF14437 MafB19-like deaminase JNE32_00130 PF12169 DNA polymerase III subunits gamma and tau domain III JNE32_00135 PF02575 YbaB/EbfC DNA-binding family JNE32_00140 PF02132 RecR protein JNE32_00140 PF13662 Toprim domain JNE32_00145 PF10704 Protein of unknown function (DUF2508) JNE32_00150 PF07441 SigmaK-factor processing regulatory protein BofA JNE32_00180 PF10764 Inhibitor of sigma-G Gin JNE32_00185 PF10112 5-bromo-4-chloroindolyl phosphate hydrolysis protein JNE32_00190 PF05816 Toxic anion resistance protein (TelA) JNE32_00195 PF01276 Orn/Lys/Arg decarboxylase, major domain JNE32_00195 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain JNE32_00200 PF02223 Thymidylate kinase JNE32_00205 PF06153 Cyclic-di-AMP receptor JNE32_00210 PF03885 Protein of unknown function (DUF327) JNE32_00215 PF09115 DNA polymerase III, delta subunit, C terminal JNE32_00220 PF04468 PSP1 C-terminal conserved region JNE32_00225 PF06156 Initiation control protein YabA JNE32_00230 PF05175 Methyltransferase small domain JNE32_00235 PF01541 GIY-YIG catalytic domain JNE32_00240 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases JNE32_00245 PF18277 AbrB C-terminal domain JNE32_00245 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin JNE32_00250 PF08264 Anticodon-binding domain of tRNA JNE32_00250 PF09334 tRNA synthetases class I (M) JNE32_00250 PF01588 Putative tRNA binding domain JNE32_00255 PF01026 TatD related DNase JNE32_00260 PF06725 3D domain JNE32_00260 PF03990 G5-linked-Ubiquitin-like domain JNE32_00260 PF07501 G5 domain JNE32_00265 PF13331 Domain of unknown function (DUF4093) JNE32_00265 PF13662 Toprim domain JNE32_00270 PF00398 Ribosomal RNA adenine dimethylase JNE32_00275 PF05582 YabG peptidase U57 JNE32_00280 PF06257 Biofilm formation stimulator VEG JNE32_00285 PF00269 Small, acid-soluble spore proteins, alpha/beta type JNE32_00290 PF08544 GHMP kinases C terminal JNE32_00290 PF00288 GHMP kinases N terminal domain JNE32_00295 PF00156 Phosphoribosyl transferase domain JNE32_00295 PF09182 Bacterial purine repressor, N-terminal JNE32_00300 PF01042 Endoribonuclease L-PSP JNE32_00305 PF04026 SpoVG JNE32_00310 PF00132 Bacterial transferase hexapeptide (six repeats) JNE32_00310 PF00483 Nucleotidyl transferase JNE32_00315 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase JNE32_00315 PF14572 Phosphoribosyl synthetase-associated domain JNE32_00320 PF01386 Ribosomal L25p family JNE32_00320 PF14693 Ribosomal protein TL5, C-terminal domain JNE32_00325 PF01195 Peptidyl-tRNA hydrolase JNE32_00330 PF10955 Protein of unknown function (DUF2757) JNE32_00335 PF17757 UvrB interaction domain JNE32_00335 PF00271 Helicase conserved C-terminal domain JNE32_00335 PF03461 TRCF domain JNE32_00335 PF02559 CarD-like/TRCF domain JNE32_00335 PF00270 DEAD/DEAH box helicase JNE32_00340 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin JNE32_00340 PF15714 Stage V sporulation protein T C-terminal, transcription factor JNE32_00345 PF01943 Polysaccharide biosynthesis protein JNE32_00345 PF14667 Polysaccharide biosynthesis C-terminal domain JNE32_00350 PF03819 MazG nucleotide pyrophosphohydrolase domain JNE32_00350 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases JNE32_00355 PF01479 S4 domain JNE32_00360 PF07873 YabP family JNE32_00365 PF09578 Spore cortex protein YabQ (Spore_YabQ) JNE32_00370 PF04977 Septum formation initiator JNE32_00375 PF00575 S1 RNA binding domain JNE32_00390 PF07228 Stage II sporulation protein E (SpoIIE) JNE32_00395 PF00092 von Willebrand factor type A domain JNE32_00400 PF00069 Protein kinase domain JNE32_00405 PF01171 PP-loop family JNE32_00405 PF09179 TilS substrate binding domain JNE32_00405 PF11734 TilS substrate C-terminal domain JNE32_00410 PF00156 Phosphoribosyl transferase domain JNE32_00415 PF00004 ATPase family associated with various cellular activities (AAA) JNE32_00415 PF17862 AAA+ lid domain JNE32_00415 PF06480 FtsH Extracellular JNE32_00415 PF01434 Peptidase family M41 JNE32_00420 PF03309 Type III pantothenate kinase JNE32_00425 PF01430 Hsp33 protein JNE32_00430 PF13145 PPIC-type PPIASE domain JNE32_00435 PF00291 Pyridoxal-phosphate dependent enzyme JNE32_00440 PF00425 chorismate binding enzyme JNE32_00440 PF04715 Anthranilate synthase component I, N terminal region JNE32_00445 PF00117 Glutamine amidotransferase class-I JNE32_00450 PF01063 Amino-transferase class IV JNE32_00455 PF00809 Pterin binding enzyme JNE32_00460 PF02152 Dihydroneopterin aldolase JNE32_00465 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) JNE32_00470 PF01381 Helix-turn-helix JNE32_00475 PF01207 Dihydrouridine synthase (Dus) JNE32_00480 PF00152 tRNA synthetases class II (D, K and N) JNE32_00480 PF01336 OB-fold nucleic acid binding domain JNE32_00560 PF05848 CtsR N-terminal HTH domain JNE32_00560 PF17727 CtsR C-terminal dimerization domain JNE32_00565 PF02151 UvrB/uvrC motif JNE32_00570 PF00217 ATP:guanido phosphotransferase, C-terminal catalytic domain JNE32_00575 PF10431 C-terminal, D2-small domain, of ClpB protein JNE32_00575 PF02861 Clp amino terminal domain, pathogenicity island component JNE32_00575 PF17871 AAA lid domain JNE32_00575 PF07724 AAA domain (Cdc48 subfamily) JNE32_00575 PF00004 ATPase family associated with various cellular activities (AAA) JNE32_00580 PF18073 Rubredoxin metal binding domain JNE32_00585 PF02457 DisA bacterial checkpoint controller nucleotide-binding JNE32_00585 PF10635 DisA bacterial checkpoint controller linker region JNE32_00595 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase JNE32_00600 PF02542 YgbB family JNE32_00605 PF00749 tRNA synthetases class I (E and Q), catalytic domain JNE32_00610 PF00132 Bacterial transferase hexapeptide (six repeats) JNE32_00610 PF06426 Serine acetyltransferase, N-terminal JNE32_00615 PF09190 DALR domain JNE32_00615 PF01406 tRNA synthetases class I (C) catalytic domain JNE32_00620 PF00636 Ribonuclease III domain JNE32_00625 PF00588 SpoU rRNA Methylase family JNE32_00625 PF08032 RNA 2'-O ribose methyltransferase substrate binding JNE32_00630 PF05991 YacP-like NYN domain JNE32_00635 PF08281 Sigma-70, region 4 JNE32_00635 PF04542 Sigma-70 region 2 JNE32_00640 PF00471 Ribosomal protein L33 JNE32_00645 PF00584 SecE/Sec61-gamma subunits of protein translocation complex JNE32_00650 PF00467 KOW motif JNE32_00650 PF02357 Transcription termination factor nusG JNE32_00655 PF00298 Ribosomal protein L11, RNA binding domain JNE32_00655 PF03946 Ribosomal protein L11, N-terminal domain JNE32_00660 PF00687 Ribosomal protein L1p/L10e family JNE32_00665 PF00466 Ribosomal protein L10 JNE32_00670 PF00542 Ribosomal protein L7/L12 C-terminal domain JNE32_00670 PF16320 Ribosomal protein L7/L12 dimerisation domain JNE32_00675 PF05175 Methyltransferase small domain JNE32_00680 PF04563 RNA polymerase beta subunit JNE32_00680 PF04561 RNA polymerase Rpb2, domain 2 JNE32_00680 PF04565 RNA polymerase Rpb2, domain 3 JNE32_00680 PF10385 RNA polymerase beta subunit external 1 domain JNE32_00680 PF00562 RNA polymerase Rpb2, domain 6 JNE32_00680 PF04560 RNA polymerase Rpb2, domain 7 JNE32_00685 PF04998 RNA polymerase Rpb1, domain 5 JNE32_00685 PF05000 RNA polymerase Rpb1, domain 4 JNE32_00685 PF04983 RNA polymerase Rpb1, domain 3 JNE32_00685 PF00623 RNA polymerase Rpb1, domain 2 JNE32_00685 PF04997 RNA polymerase Rpb1, domain 1 JNE32_00690 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family JNE32_00695 PF00164 Ribosomal protein S12/S23 JNE32_00700 PF00177 Ribosomal protein S7p/S5e JNE32_00705 PF03144 Elongation factor Tu domain 2 JNE32_00705 PF03764 Elongation factor G, domain IV JNE32_00705 PF00009 Elongation factor Tu GTP binding domain JNE32_00705 PF00679 Elongation factor G C-terminus JNE32_00705 PF14492 Elongation Factor G, domain II JNE32_00710 PF00009 Elongation factor Tu GTP binding domain JNE32_00710 PF03144 Elongation factor Tu domain 2 JNE32_00710 PF03143 Elongation factor Tu C-terminal domain JNE32_00715 PF12146 Serine aminopeptidase, S33 JNE32_00720 PF00338 Ribosomal protein S10p/S20e JNE32_00725 PF00297 Ribosomal protein L3 JNE32_00730 PF00573 Ribosomal protein L4/L1 family JNE32_00735 PF00276 Ribosomal protein L23 JNE32_00740 PF00181 Ribosomal Proteins L2, RNA binding domain JNE32_00740 PF03947 Ribosomal Proteins L2, C-terminal domain JNE32_00745 PF00203 Ribosomal protein S19 JNE32_00750 PF00237 Ribosomal protein L22p/L17e JNE32_00755 PF07650 KH domain JNE32_00755 PF00189 Ribosomal protein S3, C-terminal domain JNE32_00760 PF00252 Ribosomal protein L16p/L10e JNE32_00765 PF00831 Ribosomal L29 protein JNE32_00770 PF00366 Ribosomal protein S17 JNE32_00775 PF00238 Ribosomal protein L14p/L23e JNE32_00780 PF00467 KOW motif JNE32_00780 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 JNE32_00785 PF00281 Ribosomal protein L5 JNE32_00785 PF00673 ribosomal L5P family C-terminus JNE32_00790 PF00253 Ribosomal protein S14p/S29e JNE32_00795 PF00410 Ribosomal protein S8 JNE32_00800 PF00347 Ribosomal protein L6 JNE32_00805 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast JNE32_00810 PF00333 Ribosomal protein S5, N-terminal domain JNE32_00810 PF03719 Ribosomal protein S5, C-terminal domain JNE32_00815 PF00327 Ribosomal protein L30p/L7e JNE32_00820 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A JNE32_00825 PF00344 SecY translocase JNE32_00830 PF05191 Adenylate kinase, active site lid JNE32_00835 PF00557 Metallopeptidase family M24 JNE32_00845 PF01176 Translation initiation factor 1A / IF-1 JNE32_00850 PF00444 Ribosomal protein L36 JNE32_00855 PF00416 Ribosomal protein S13/S18 JNE32_00860 PF00411 Ribosomal protein S11 JNE32_00865 PF01000 RNA polymerase Rpb3/RpoA insert domain JNE32_00865 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain JNE32_00865 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain JNE32_00870 PF01196 Ribosomal protein L17 JNE32_00875 PF00005 ABC transporter JNE32_00880 PF00005 ABC transporter JNE32_00885 PF02361 Cobalt transport protein JNE32_00890 PF01416 tRNA pseudouridine synthase JNE32_00895 PF00572 Ribosomal protein L13 JNE32_00900 PF00380 Ribosomal protein S9/S16 JNE32_00905 PF08241 Methyltransferase domain JNE32_00910 PF10730 Protein of unknown function (DUF2521) JNE32_00915 PF01520 N-acetylmuramoyl-L-alanine amidase JNE32_00920 PF10609 NUBPL iron-transfer P-loop NTPase JNE32_00925 PF17898 Spore germination GerD central core domain JNE32_00930 PF14089 KinB-signalling pathway activation in sporulation JNE32_00935 PF01522 Polysaccharide deacetylase JNE32_01020 PF01740 STAS domain JNE32_01020 PF00916 Sulfate permease family JNE32_01025 PF01758 Sodium Bile acid symporter family JNE32_01030 PF00756 Putative esterase JNE32_01035 PF01032 FecCD transport family JNE32_01040 PF01032 FecCD transport family JNE32_01045 PF01497 Periplasmic binding protein JNE32_01050 PF01497 Periplasmic binding protein JNE32_01050 PF12833 Helix-turn-helix domain JNE32_01055 PF07075 Protein of unknown function (DUF1343) JNE32_01060 PF00933 Glycosyl hydrolase family 3 N terminal domain JNE32_01060 PF01915 Glycosyl hydrolase family 3 C-terminal domain JNE32_01065 PF00144 Beta-lactamase JNE32_01070 PF00367 phosphotransferase system, EIIB JNE32_01070 PF02378 Phosphotransferase system, EIIC JNE32_01075 PF01418 Helix-turn-helix domain, rpiR family JNE32_01075 PF01380 SIS domain JNE32_01080 PF01380 SIS domain JNE32_01090 PF04463 Protein of unknown function (DUF523) JNE32_01120 PF04542 Sigma-70 region 2 JNE32_01120 PF08281 Sigma-70, region 4 JNE32_01125 PF13490 Putative zinc-finger JNE32_01130 PF02457 DisA bacterial checkpoint controller nucleotide-binding JNE32_01135 PF07949 YbbR-like protein JNE32_01140 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain JNE32_01140 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III JNE32_01140 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II JNE32_01140 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I JNE32_01145 PF01380 SIS domain JNE32_01155 PF00730 HhH-GPD superfamily base excision DNA repair protein JNE32_01155 PF07934 8-oxoguanine DNA glycosylase, N-terminal domain JNE32_01160 PF02805 Metal binding domain of Ada JNE32_01160 PF12833 Helix-turn-helix domain JNE32_01165 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain JNE32_01165 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain JNE32_01170 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus JNE32_01170 PF00361 Proton-conducting membrane transporter JNE32_01175 PF10070 Uncharacterized protein conserved in bacteria (DUF2309) JNE32_01190 PF10057 Uncharacterized conserved protein (DUF2294) JNE32_01200 PF07690 Major Facilitator Superfamily JNE32_01215 PF00082 Subtilase family JNE32_01220 PF14028 Lantibiotic biosynthesis dehydratase C-term JNE32_01220 PF04738 Lantibiotic dehydratase, N terminus JNE32_01225 PF05147 Lanthionine synthetase C-like protein JNE32_01235 PF00005 ABC transporter JNE32_01235 PF00664 ABC transporter transmembrane region JNE32_01240 PF00561 alpha/beta hydrolase fold JNE32_01245 PF00072 Response regulator receiver domain JNE32_01245 PF00486 Transcriptional regulatory protein, C terminal JNE32_01250 PF00672 HAMP domain JNE32_01250 PF00512 His Kinase A (phospho-acceptor) domain JNE32_01260 PF00069 Protein kinase domain JNE32_01270 PF16226 Domain of unknown function (DUF4885) JNE32_01275 PF00324 Amino acid permease JNE32_01280 PF17334 Minor curli fiber component A JNE32_01285 PF17340 Family of unknown function (DUF5370) JNE32_01290 PF00905 Penicillin binding protein transpeptidase domain JNE32_01295 PF00067 Cytochrome P450 JNE32_01305 PF13520 Amino acid permease JNE32_01310 PF03009 Glycerophosphoryl diester phosphodiesterase family JNE32_01315 PF07690 Major Facilitator Superfamily JNE32_01320 PF10852 Protein of unknown function (DUF2651) JNE32_01325 PF01047 MarR family JNE32_01325 PF00583 Acetyltransferase (GNAT) family JNE32_01330 PF07690 Major Facilitator Superfamily JNE32_01340 PF08924 Domain of unknown function (DUF1906) JNE32_01340 PF01471 Putative peptidoglycan binding domain JNE32_01345 PF00892 EamA-like transporter family JNE32_01350 PF02311 AraC-like ligand binding domain JNE32_01350 PF12833 Helix-turn-helix domain JNE32_01355 PF02222 ATP-grasp domain JNE32_01360 PF00089 Trypsin JNE32_01365 PF10794 Protein of unknown function (DUF2606) JNE32_01370 PF12697 Alpha/beta hydrolase family JNE32_01375 PF01066 CDP-alcohol phosphatidyltransferase JNE32_01380 PF09335 SNARE associated Golgi protein JNE32_01385 PF02666 Phosphatidylserine decarboxylase JNE32_01395 PF17773 UPF0176 acylphosphatase like domain JNE32_01395 PF12368 Rhodanase C-terminal JNE32_01395 PF00581 Rhodanese-like domain JNE32_01400 PF00375 Sodium:dicarboxylate symporter family JNE32_01405 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 JNE32_01405 PF00367 phosphotransferase system, EIIB JNE32_01405 PF02378 Phosphotransferase system, EIIC JNE32_01410 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase JNE32_01415 PF00392 Bacterial regulatory proteins, gntR family JNE32_01415 PF07702 UTRA domain JNE32_01420 PF07853 Protein of unknown function (DUF1648) JNE32_01425 PF01063 Amino-transferase class IV JNE32_01430 PF00324 Amino acid permease JNE32_01435 PF02574 Homocysteine S-methyltransferase JNE32_01440 PF01235 Sodium:alanine symporter family JNE32_01445 PF04960 Glutaminase JNE32_01450 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JNE32_01455 PF08664 YcbB domain JNE32_01455 PF00072 Response regulator receiver domain JNE32_01460 PF00701 Dihydrodipicolinate synthetase family JNE32_01465 PF00171 Aldehyde dehydrogenase family JNE32_01470 PF07690 Major Facilitator Superfamily JNE32_01475 PF13378 Enolase C-terminal domain-like JNE32_01480 PF07729 FCD domain JNE32_01480 PF00392 Bacterial regulatory proteins, gntR family JNE32_01485 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus JNE32_01485 PF08666 SAF domain JNE32_01490 PF01636 Phosphotransferase enzyme family JNE32_01495 PF15777 Tryptophan RNA-binding attenuator protein inhibitory protein JNE32_01500 PF00892 EamA-like transporter family JNE32_01505 PF00072 Response regulator receiver domain JNE32_01505 PF00486 Transcriptional regulatory protein, C terminal JNE32_01510 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JNE32_01510 PF00512 His Kinase A (phospho-acceptor) domain JNE32_01515 PF00005 ABC transporter JNE32_01530 PF10710 Protein of unknown function (DUF2512) JNE32_01535 PF07486 Cell Wall Hydrolase JNE32_01540 PF10138 vWA found in TerF C terminus JNE32_01550 PF09423 PhoD-like phosphatase JNE32_01550 PF16655 PhoD-like phosphatase, N-terminal domain JNE32_01555 PF02416 mttA/Hcf106 family JNE32_01560 PF00902 Sec-independent protein translocase protein (TatC) JNE32_01565 PF01470 Pyroglutamyl peptidase JNE32_01570 PF00266 Aminotransferase class-V JNE32_01575 PF07690 Major Facilitator Superfamily JNE32_01580 PF00440 Bacterial regulatory proteins, tetR family JNE32_01585 PF00710 Asparaginase, N-terminal JNE32_01585 PF17763 Glutaminase/Asparaginase C-terminal domain JNE32_01590 PF01674 Lipase (class 2) JNE32_01595 PF06271 RDD family JNE32_01600 PF02810 SEC-C motif JNE32_01600 PF05225 helix-turn-helix, Psq domain JNE32_01605 PF14501 GHKL domain JNE32_01610 PF04397 LytTr DNA-binding domain JNE32_01610 PF00072 Response regulator receiver domain JNE32_01615 PF00005 ABC transporter JNE32_01620 PF12679 ABC-2 family transporter protein JNE32_01625 PF00248 Aldo/keto reductase family JNE32_01630 PF11611 Domain of unknown function (DUF4352) JNE32_01630 PF17118 Domain of unknown function (DUF5105) JNE32_01640 PF16244 Domain of unknown function (DUF4901) JNE32_01645 PF16244 Domain of unknown function (DUF4901) JNE32_01650 PF13539 D-alanyl-D-alanine carboxypeptidase JNE32_01655 PF18801 response regulator aspartate phosphatase H, N terminal JNE32_01665 PF00128 Alpha amylase, catalytic domain JNE32_01670 PF01297 Zinc-uptake complex component A periplasmic JNE32_01675 PF00005 ABC transporter JNE32_01680 PF00950 ABC 3 transport family JNE32_01685 PF00296 Luciferase-like monooxygenase JNE32_01690 PF02342 TerD domain JNE32_01695 PF02342 TerD domain JNE32_01700 PF02342 TerD domain JNE32_01705 PF03741 Integral membrane protein TerC family JNE32_01710 PF14266 Putative component of 'biosynthetic module' JNE32_01715 PF05816 Toxic anion resistance protein (TelA) JNE32_01720 PF07690 Major Facilitator Superfamily JNE32_01725 PF07690 Major Facilitator Superfamily JNE32_01735 PF00005 ABC transporter JNE32_01735 PF00571 CBS domain JNE32_01740 PF00528 Binding-protein-dependent transport system inner membrane component JNE32_01745 PF04069 Substrate binding domain of ABC-type glycine betaine transport system JNE32_01750 PF07687 Peptidase dimerisation domain JNE32_01750 PF01546 Peptidase family M20/M25/M40 JNE32_01755 PF03606 C4-dicarboxylate anaerobic carrier JNE32_01765 PF16738 Starch-binding module 26 JNE32_01765 PF00128 Alpha amylase, catalytic domain JNE32_01770 PF00056 lactate/malate dehydrogenase, NAD binding domain JNE32_01770 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain JNE32_01775 PF02652 L-lactate permease JNE32_01780 PF07690 Major Facilitator Superfamily JNE32_01785 PF01047 MarR family JNE32_01790 PF01810 LysE type translocator JNE32_01795 PF08892 YqcI/YcgG family JNE32_01800 PF00324 Amino acid permease JNE32_01805 PF09347 Domain of unknown function (DUF1989) JNE32_01810 PF02540 NAD synthase JNE32_01820 PF01202 Shikimate kinase JNE32_01825 PF08241 Methyltransferase domain JNE32_01830 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JNE32_01830 PF03466 LysR substrate binding domain JNE32_01835 PF05448 Acetyl xylan esterase (AXE1) JNE32_01840 PF10127 RNA repair pathway DNA polymerase beta family JNE32_01845 PF01619 Proline dehydrogenase JNE32_01850 PF00171 Aldehyde dehydrogenase family JNE32_01855 PF00474 Sodium:solute symporter family JNE32_01860 PF17853 GGDEF-like domain JNE32_01860 PF13556 PucR C-terminal helix-turn-helix domain JNE32_01865 PF09323 Domain of unknown function (DUF1980) JNE32_01870 PF03773 Predicted permease JNE32_01875 PF00561 alpha/beta hydrolase fold JNE32_01880 PF07992 Pyridine nucleotide-disulphide oxidoreductase JNE32_01885 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases JNE32_01890 PF00355 Rieske [2Fe-2S] domain JNE32_01895 PF18267 Rubredoxin NAD+ reductase C-terminal domain JNE32_01895 PF04324 BFD-like [2Fe-2S] binding domain JNE32_01895 PF01077 Nitrite and sulphite reductase 4Fe-4S domain JNE32_01895 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain JNE32_01895 PF07992 Pyridine nucleotide-disulphide oxidoreductase JNE32_01900 PF04879 Molybdopterin oxidoreductase Fe4S4 domain JNE32_01900 PF01568 Molydopterin dinucleotide binding domain JNE32_01900 PF00384 Molybdopterin oxidoreductase JNE32_01905 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain JNE32_01905 PF07992 Pyridine nucleotide-disulphide oxidoreductase JNE32_01905 PF18267 Rubredoxin NAD+ reductase C-terminal domain JNE32_01905 PF04324 BFD-like [2Fe-2S] binding domain JNE32_01910 PF07690 Major Facilitator Superfamily JNE32_01915 PF02649 Type I GTP cyclohydrolase folE2 JNE32_01920 PF03734 L,D-transpeptidase catalytic domain JNE32_01935 PF07683 Cobalamin synthesis protein cobW C-terminal domain JNE32_01935 PF02492 CobW/HypB/UreG, nucleotide-binding domain JNE32_01940 PF00528 Binding-protein-dependent transport system inner membrane component JNE32_01945 PF00497 Bacterial extracellular solute-binding proteins, family 3 JNE32_01955 PF06271 RDD family JNE32_01960 PF10925 Protein of unknown function (DUF2680) JNE32_01965 PF00232 Glycosyl hydrolase family 1 JNE32_01970 PF11033 Competence protein J (ComJ) JNE32_01975 PF14040 Deoxyribonuclease NucA/NucB JNE32_01980 PF00672 HAMP domain JNE32_01980 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JNE32_01980 PF17202 Single cache domain 3 JNE32_01985 PF01380 SIS domain JNE32_01990 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family JNE32_01995 PF01638 HxlR-like helix-turn-helix JNE32_02000 PF00550 Phosphopantetheine attachment site JNE32_02000 PF00668 Condensation domain JNE32_02000 PF13193 AMP-binding enzyme C-terminal domain JNE32_02000 PF00501 AMP-binding enzyme JNE32_02005 PF00501 AMP-binding enzyme JNE32_02005 PF13193 AMP-binding enzyme C-terminal domain JNE32_02005 PF00668 Condensation domain JNE32_02005 PF00550 Phosphopantetheine attachment site JNE32_02010 PF00501 AMP-binding enzyme JNE32_02010 PF13193 AMP-binding enzyme C-terminal domain JNE32_02010 PF00668 Condensation domain JNE32_02010 PF00550 Phosphopantetheine attachment site JNE32_02010 PF00975 Thioesterase domain JNE32_02015 PF00975 Thioesterase domain JNE32_02020 PF07690 Major Facilitator Superfamily JNE32_02025 PF14317 YcxB-like protein JNE32_02030 PF00892 EamA-like transporter family JNE32_02040 PF01648 4'-phosphopantetheinyl transferase superfamily JNE32_02050 PF00005 ABC transporter JNE32_02055 PF00528 Binding-protein-dependent transport system inner membrane component JNE32_02060 PF00497 Bacterial extracellular solute-binding proteins, family 3 JNE32_02065 PF03466 LysR substrate binding domain JNE32_02065 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JNE32_02070 PF02441 Flavoprotein JNE32_02075 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase JNE32_02090 PF00561 alpha/beta hydrolase fold JNE32_02095 PF00854 POT family JNE32_02100 PF13229 Right handed beta helix region JNE32_02100 PF12708 Pectate lyase superfamily protein JNE32_02110 PF03323 Bacillus/Clostridium GerA spore germination protein JNE32_02115 PF05504 Spore germination B3/ GerAC like, C-terminal JNE32_02120 PF03845 Spore germination protein JNE32_02125 PF00005 ABC transporter JNE32_02130 PF12704 MacB-like periplasmic core domain JNE32_02130 PF02687 FtsX-like permease family JNE32_02135 PF00486 Transcriptional regulatory protein, C terminal JNE32_02135 PF00072 Response regulator receiver domain JNE32_02140 PF00672 HAMP domain JNE32_02140 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JNE32_02140 PF00512 His Kinase A (phospho-acceptor) domain JNE32_02145 PF18801 response regulator aspartate phosphatase H, N terminal JNE32_02150 PF11131 Rap-phr extracellular signalling JNE32_02155 PF09680 Family of unknown function JNE32_02160 PF09680 Family of unknown function JNE32_02165 PF00696 Amino acid kinase family JNE32_02165 PF13840 ACT domain JNE32_02170 PF01032 FecCD transport family JNE32_02175 PF01032 FecCD transport family JNE32_02180 PF00005 ABC transporter JNE32_02185 PF01497 Periplasmic binding protein JNE32_02190 PF07690 Major Facilitator Superfamily JNE32_02195 PF00440 Bacterial regulatory proteins, tetR family JNE32_02200 PF00881 Nitroreductase family JNE32_02205 PF03992 Antibiotic biosynthesis monooxygenase JNE32_02210 PF01022 Bacterial regulatory protein, arsR family JNE32_02215 PF00392 Bacterial regulatory proteins, gntR family JNE32_02215 PF00155 Aminotransferase class I and II JNE32_02220 PF00202 Aminotransferase class-III JNE32_02225 PF00171 Aldehyde dehydrogenase family JNE32_02230 PF06800 Sugar transport protein JNE32_02240 PF07987 Domain of unkown function (DUF1775) JNE32_02245 PF04234 CopC domain JNE32_02245 PF05425 Copper resistance protein D JNE32_02245 PF13115 YtkA-like JNE32_02250 PF08220 DeoR-like helix-turn-helix domain JNE32_02250 PF05573 NosL JNE32_02260 PF02378 Phosphotransferase system, EIIC JNE32_02260 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit JNE32_02265 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 JNE32_02270 PF01232 Mannitol dehydrogenase Rossmann domain JNE32_02270 PF08125 Mannitol dehydrogenase C-terminal domain JNE32_02275 PF00180 Isocitrate/isopropylmalate dehydrogenase JNE32_02280 PF10502 Signal peptidase, peptidase S26 JNE32_02285 PF01738 Dienelactone hydrolase family JNE32_02290 PF07977 FabA-like domain JNE32_02305 PF03746 LamB/YcsF family JNE32_02310 PF01566 Natural resistance-associated macrophage protein JNE32_02320 PF02682 Carboxyltransferase domain, subdomain C and D JNE32_02325 PF02626 Carboxyltransferase domain, subdomain A and B JNE32_02330 PF09339 IclR helix-turn-helix domain JNE32_02330 PF01614 Bacterial transcriptional regulator JNE32_02335 PF13472 GDSL-like Lipase/Acylhydrolase family JNE32_02340 PF13129 Protein of unknown function (DUF3953) JNE32_02345 PF03992 Antibiotic biosynthesis monooxygenase JNE32_02350 PF05223 NTF2-like N-terminal transpeptidase domain JNE32_02350 PF03717 Penicillin-binding Protein dimerisation domain JNE32_02350 PF00905 Penicillin binding protein transpeptidase domain JNE32_02355 PF00248 Aldo/keto reductase family JNE32_02365 PF00501 AMP-binding enzyme JNE32_02365 PF13193 AMP-binding enzyme C-terminal domain JNE32_02370 PF13649 Methyltransferase domain JNE32_02385 PF13302 Acetyltransferase (GNAT) domain JNE32_02390 PF16242 Pyridoxamine 5'-phosphate oxidase like JNE32_02395 PF10997 Alternate to MurJ JNE32_02400 PF12823 Domain of unknown function (DUF3817) JNE32_02405 PF01037 Lrp/AsnC ligand binding domain JNE32_02410 PF01131 DNA topoisomerase JNE32_02410 PF01751 Toprim domain JNE32_02420 PF00990 Diguanylate cyclase, GGDEF domain JNE32_02425 PF10096 Uncharacterized protein conserved in bacteria (DUF2334) JNE32_02435 PF03170 Bacterial cellulose synthase subunit JNE32_02440 PF13520 Amino acid permease JNE32_02445 PF00293 NUDIX domain JNE32_02450 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain JNE32_02450 PF00205 Thiamine pyrophosphate enzyme, central domain JNE32_02450 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain JNE32_02465 PF01566 Natural resistance-associated macrophage protein JNE32_02470 PF04226 Transglycosylase associated protein JNE32_02475 PF09954 Uncharacterized protein conserved in bacteria (DUF2188) JNE32_02480 PF12787 EcsC protein family JNE32_02485 PF10685 Stress-induced bacterial acidophilic repeat motif JNE32_02485 PF00477 Small hydrophilic plant seed protein JNE32_02490 PF07883 Cupin domain JNE32_02495 PF16291 Domain of unknown function (DUF4937 JNE32_02500 PF05067 Manganese containing catalase JNE32_02505 PF03480 Bacterial extracellular solute-binding protein, family 7 JNE32_02510 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JNE32_02510 PF17203 Single cache domain 3 JNE32_02510 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain JNE32_02515 PF08279 HTH domain JNE32_02515 PF00072 Response regulator receiver domain JNE32_02520 PF00375 Sodium:dicarboxylate symporter family JNE32_02525 PF01594 AI-2E family transporter JNE32_02535 PF00005 ABC transporter JNE32_02550 PF02771 Acyl-CoA dehydrogenase, N-terminal domain JNE32_02550 PF08028 Acyl-CoA dehydrogenase, C-terminal domain JNE32_02550 PF02770 Acyl-CoA dehydrogenase, middle domain JNE32_02555 PF13040 Fur-regulated basic protein B JNE32_02565 PF16916 Dimerisation domain of Zinc Transporter JNE32_02565 PF01545 Cation efflux family JNE32_02570 PF00085 Thioredoxin JNE32_02575 PF07478 D-ala D-ala ligase C-terminus JNE32_02575 PF01820 D-ala D-ala ligase N-terminus JNE32_02580 PF01225 Mur ligase family, catalytic domain JNE32_02580 PF02875 Mur ligase family, glutamate ligase domain JNE32_02580 PF08245 Mur ligase middle domain JNE32_02585 PF00271 Helicase conserved C-terminal domain JNE32_02585 PF00270 DEAD/DEAH box helicase JNE32_02590 PF03703 Bacterial PH domain JNE32_02595 PF03703 Bacterial PH domain JNE32_02600 PF01694 Rhomboid family JNE32_02605 PF01648 4'-phosphopantetheinyl transferase superfamily JNE32_02615 PF00842 Alanine racemase, C-terminal domain JNE32_02615 PF01168 Alanine racemase, N-terminal domain JNE32_02620 PF01402 Ribbon-helix-helix protein, copG family JNE32_02625 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system JNE32_02630 PF08678 Rsbr N terminal JNE32_02630 PF01740 STAS domain JNE32_02635 PF01740 STAS domain JNE32_02640 PF13581 Histidine kinase-like ATPase domain JNE32_02645 PF08673 Phosphoserine phosphatase RsbU, N-terminal domain JNE32_02645 PF07228 Stage II sporulation protein E (SpoIIE) JNE32_02650 PF01740 STAS domain JNE32_02655 PF13581 Histidine kinase-like ATPase domain JNE32_02660 PF04542 Sigma-70 region 2 JNE32_02660 PF04539 Sigma-70 region 3 JNE32_02660 PF04545 Sigma-70, region 4 JNE32_02665 PF07228 Stage II sporulation protein E (SpoIIE) JNE32_02670 PF17674 HHH domain JNE32_02670 PF00575 S1 RNA binding domain JNE32_02670 PF09371 Tex-like protein N-terminal domain JNE32_02670 PF16921 Tex protein YqgF-like domain JNE32_02680 PF17283 SprT-like zinc ribbon domain JNE32_02680 PF10263 SprT-like family JNE32_02730 PF01381 Helix-turn-helix JNE32_02755 PF01965 DJ-1/PfpI family JNE32_02760 PF00313 'Cold-shock' DNA-binding domain JNE32_02765 PF02559 CarD-like/TRCF domain JNE32_02770 PF00892 EamA-like transporter family JNE32_02775 PF02311 AraC-like ligand binding domain JNE32_02775 PF12833 Helix-turn-helix domain JNE32_02780 PF00892 EamA-like transporter family JNE32_02785 PF06445 GyrI-like small molecule binding domain JNE32_02785 PF12833 Helix-turn-helix domain JNE32_02790 PF00392 Bacterial regulatory proteins, gntR family JNE32_02790 PF00155 Aminotransferase class I and II JNE32_02795 PF07690 Major Facilitator Superfamily JNE32_02805 PF08818 Domain of unknown function (DU1801) JNE32_02820 PF00381 PTS HPr component phosphorylation site JNE32_02825 PF00440 Bacterial regulatory proteins, tetR family JNE32_02830 PF00892 EamA-like transporter family JNE32_02835 PF00155 Aminotransferase class I and II JNE32_02835 PF00392 Bacterial regulatory proteins, gntR family JNE32_02840 PF01575 MaoC like domain JNE32_02845 PF06821 Serine hydrolase JNE32_02850 PF01638 HxlR-like helix-turn-helix JNE32_02855 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 JNE32_02855 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) JNE32_02860 PF07690 Major Facilitator Superfamily JNE32_02865 PF00440 Bacterial regulatory proteins, tetR family JNE32_02865 PF16859 Tetracyclin repressor-like, C-terminal domain JNE32_02875 PF01022 Bacterial regulatory protein, arsR family JNE32_02880 PF02040 Arsenical pump membrane protein JNE32_02890 PF12746 GNAT acetyltransferase JNE32_02895 PF00892 EamA-like transporter family JNE32_02900 PF00392 Bacterial regulatory proteins, gntR family JNE32_02900 PF00155 Aminotransferase class I and II JNE32_02905 PF01613 Flavin reductase like domain JNE32_02915 PF02627 Carboxymuconolactone decarboxylase family JNE32_02930 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JNE32_02930 PF07730 Histidine kinase JNE32_02935 PF00072 Response regulator receiver domain JNE32_02935 PF00196 Bacterial regulatory proteins, luxR family JNE32_02940 PF03176 MMPL family JNE32_02945 PF12697 Alpha/beta hydrolase family JNE32_02950 PF04474 Protein of unknown function (DUF554) JNE32_02955 PF06445 GyrI-like small molecule binding domain JNE32_02955 PF13411 MerR HTH family regulatory protein JNE32_02960 PF01545 Cation efflux family JNE32_02960 PF16916 Dimerisation domain of Zinc Transporter JNE32_02965 PF00881 Nitroreductase family JNE32_02970 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily JNE32_02975 PF07681 DoxX JNE32_02980 PF00085 Thioredoxin JNE32_02985 PF10676 Spore germination protein gerPA/gerPF JNE32_02995 PF10676 Spore germination protein gerPA/gerPF JNE32_03000 PF04239 Protein of unknown function (DUF421) JNE32_03005 PF04239 Protein of unknown function (DUF421) JNE32_03010 PF00011 Hsp20/alpha crystallin family JNE32_03015 PF10676 Spore germination protein gerPA/gerPF JNE32_03020 PF10676 Spore germination protein gerPA/gerPF JNE32_03025 PF00440 Bacterial regulatory proteins, tetR family JNE32_03030 PF13564 DoxX-like family JNE32_03035 PF00583 Acetyltransferase (GNAT) family JNE32_03040 PF00005 ABC transporter JNE32_03040 PF12848 ABC transporter JNE32_03045 PF00324 Amino acid permease JNE32_03050 PF05163 DinB family JNE32_03055 PF01047 MarR family JNE32_03060 PF03176 MMPL family JNE32_03065 PF00881 Nitroreductase family JNE32_03070 PF01047 MarR family JNE32_03075 PF07690 Major Facilitator Superfamily JNE32_03080 PF01925 Sulfite exporter TauE/SafE JNE32_03085 PF00392 Bacterial regulatory proteins, gntR family JNE32_03085 PF07729 FCD domain JNE32_03090 PF00704 Glycosyl hydrolases family 18 JNE32_03090 PF01476 LysM domain JNE32_03095 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase JNE32_03100 PF11611 Domain of unknown function (DUF4352) JNE32_03100 PF08139 Prokaryotic membrane lipoprotein lipid attachment site JNE32_03105 PF00245 Alkaline phosphatase JNE32_03110 PF08818 Domain of unknown function (DU1801) JNE32_03115 PF16302 Domain of unknown function (DUF4944) JNE32_03120 PF00583 Acetyltransferase (GNAT) family JNE32_03125 PF01966 HD domain JNE32_03130 PF07563 Protein of unknown function (DUF1541) JNE32_03135 PF07690 Major Facilitator Superfamily JNE32_03140 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit JNE32_03145 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit JNE32_03150 PF02378 Phosphotransferase system, EIIC JNE32_03155 PF00232 Glycosyl hydrolase family 1 JNE32_03160 PF00392 Bacterial regulatory proteins, gntR family JNE32_03160 PF07702 UTRA domain JNE32_03165 PF00480 ROK family JNE32_03170 PF01238 Phosphomannose isomerase type I JNE32_03175 PF02156 Glycosyl hydrolase family 26 JNE32_03220 PF02769 AIR synthase related protein, C-terminal domain JNE32_03220 PF00586 AIR synthase related protein, N-terminal domain JNE32_03225 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE JNE32_03230 PF00814 Glycoprotease family JNE32_03235 PF00583 Acetyltransferase (GNAT) family JNE32_03240 PF00814 Glycoprotease family JNE32_03245 PF00005 ABC transporter JNE32_03245 PF12848 ABC transporter JNE32_03245 PF16326 ABC transporter C-terminal domain JNE32_03250 PF01967 MoaC family JNE32_03255 PF02629 CoA binding domain JNE32_03255 PF06971 Putative DNA-binding protein N-terminus JNE32_03260 PF02416 mttA/Hcf106 family JNE32_03265 PF00902 Sec-independent protein translocase protein (TatC) JNE32_03270 PF14146 Domain of unknown function (DUF4305) JNE32_03275 PF02517 CPBP intramembrane metalloprotease JNE32_03280 PF00166 Chaperonin 10 Kd subunit JNE32_03285 PF00118 TCP-1/cpn60 chaperonin family JNE32_03295 PF13176 Tetratricopeptide repeat JNE32_03295 PF00931 NB-ARC domain JNE32_03300 PF00107 Zinc-binding dehydrogenase JNE32_03300 PF08240 Alcohol dehydrogenase GroES-like domain JNE32_03310 PF00294 pfkB family carbohydrate kinase JNE32_03315 PF04012 PspA/IM30 family JNE32_03320 PF08271 TFIIB zinc-binding JNE32_03325 PF04536 TPM domain JNE32_03330 PF13421 SPFH domain-Band 7 family JNE32_03335 PF07885 Ion channel JNE32_03340 PF00083 Sugar (and other) transporter JNE32_03345 PF08240 Alcohol dehydrogenase GroES-like domain JNE32_03345 PF00107 Zinc-binding dehydrogenase JNE32_03350 PF03330 Lytic transglycolase JNE32_03355 PF07676 WD40-like Beta Propeller Repeat JNE32_03365 PF14169 Cold-inducible protein YdjO JNE32_03370 PF12697 Alpha/beta hydrolase family JNE32_03375 PF13170 Protein of unknown function (DUF4003) JNE32_03380 PF00394 Multicopper oxidase JNE32_03380 PF07731 Multicopper oxidase JNE32_03380 PF07732 Multicopper oxidase JNE32_03385 PF00324 Amino acid permease JNE32_03395 PF16916 Dimerisation domain of Zinc Transporter JNE32_03395 PF01545 Cation efflux family JNE32_03400 PF07726 ATPase family associated with various cellular activities (AAA) JNE32_03400 PF17863 AAA lid domain JNE32_03405 PF01882 Protein of unknown function DUF58 JNE32_03410 PF11992 Domain of unknown function (DUF3488) JNE32_03410 PF01841 Transglutaminase-like superfamily JNE32_03410 PF13559 Domain of unknown function (DUF4129) JNE32_03420 PF00958 GMP synthase C terminal domain JNE32_03420 PF02540 NAD synthase JNE32_03420 PF00117 Glutamine amidotransferase class-I JNE32_03425 PF00860 Permease family JNE32_03435 PF13076 Fur-regulated basic protein A JNE32_03440 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) JNE32_03445 PF14044 NETI protein JNE32_03450 PF00731 AIR carboxylase JNE32_03455 PF02222 ATP-grasp domain JNE32_03455 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain JNE32_03460 PF10397 Adenylosuccinate lyase C-terminus JNE32_03460 PF00206 Lyase JNE32_03465 PF01259 SAICAR synthetase JNE32_03470 PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase JNE32_03480 PF00586 AIR synthase related protein, N-terminal domain JNE32_03480 PF02769 AIR synthase related protein, C-terminal domain JNE32_03480 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain JNE32_03485 PF00156 Phosphoribosyl transferase domain JNE32_03490 PF02769 AIR synthase related protein, C-terminal domain JNE32_03490 PF00586 AIR synthase related protein, N-terminal domain JNE32_03495 PF00551 Formyl transferase JNE32_03500 PF01808 AICARFT/IMPCHase bienzyme JNE32_03500 PF02142 MGS-like domain JNE32_03505 PF02843 Phosphoribosylglycinamide synthetase, C domain JNE32_03505 PF02844 Phosphoribosylglycinamide synthetase, N domain JNE32_03505 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain JNE32_03510 PF01037 Lrp/AsnC ligand binding domain JNE32_03515 PF13520 Amino acid permease JNE32_03520 PF11127 Protein of unknown function (DUF2892) JNE32_03525 PF01979 Amidohydrolase family JNE32_03525 PF13382 Adenine deaminase C-terminal domain JNE32_03530 PF17479 Protein of unknown function (DUF3048) C-terminal domain JNE32_03530 PF11258 Protein of unknown function (DUF3048) N-terminal domain JNE32_03535 PF01371 Trp repressor protein JNE32_03540 PF01645 Conserved region in glutamate synthase JNE32_03545 PF01884 PcrB family JNE32_03550 PF00580 UvrD/REP helicase N-terminal domain JNE32_03550 PF13361 UvrD-like helicase C-terminal domain JNE32_03555 PF03120 NAD-dependent DNA ligase OB-fold domain JNE32_03555 PF00533 BRCA1 C Terminus (BRCT) domain JNE32_03555 PF01653 NAD-dependent DNA ligase adenylation domain JNE32_03555 PF03119 NAD-dependent DNA ligase C4 zinc finger domain JNE32_03555 PF12826 Helix-hairpin-helix motif JNE32_03560 PF07537 CamS sex pheromone cAM373 precursor JNE32_03565 PF01636 Phosphotransferase enzyme family JNE32_03570 PF02308 MgtC family JNE32_03575 PF00474 Sodium:solute symporter family JNE32_03580 PF02686 Glu-tRNAGln amidotransferase C subunit JNE32_03585 PF01425 Amidase JNE32_03590 PF02934 GatB/GatE catalytic domain JNE32_03590 PF02637 GatB domain JNE32_03595 PF00440 Bacterial regulatory proteins, tetR family JNE32_03600 PF00873 AcrB/AcrD/AcrF family JNE32_03605 PF00781 Diacylglycerol kinase catalytic domain JNE32_03610 PF01938 TRAM domain JNE32_03610 PF05958 tRNA (Uracil-5-)-methyltransferase JNE32_03620 PF18801 response regulator aspartate phosphatase H, N terminal JNE32_03620 PF13181 Tetratricopeptide repeat JNE32_03635 PF04740 LXG domain of WXG superfamily JNE32_03645 PF13176 Tetratricopeptide repeat JNE32_03645 PF18801 response regulator aspartate phosphatase H, N terminal JNE32_03655 PF01709 Transcriptional regulator JNE32_03665 PF00440 Bacterial regulatory proteins, tetR family JNE32_03670 PF12680 SnoaL-like domain JNE32_03675 PF01370 NAD dependent epimerase/dehydratase family JNE32_03680 PF11007 Spore coat associated protein JA (CotJA) JNE32_03685 PF12652 CotJB protein JNE32_03690 PF05067 Manganese containing catalase JNE32_03695 PF00583 Acetyltransferase (GNAT) family JNE32_03705 PF04854 Protein of unknown function, DUF624 JNE32_03710 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JNE32_03710 PF00672 HAMP domain JNE32_03710 PF06580 Histidine kinase JNE32_03710 PF02743 Cache domain JNE32_03715 PF12833 Helix-turn-helix domain JNE32_03715 PF00072 Response regulator receiver domain JNE32_03720 PF13416 Bacterial extracellular solute-binding protein JNE32_03725 PF00528 Binding-protein-dependent transport system inner membrane component JNE32_03730 PF00528 Binding-protein-dependent transport system inner membrane component JNE32_03735 PF07470 Glycosyl Hydrolase Family 88 JNE32_03740 PF12833 Helix-turn-helix domain JNE32_03745 PF13472 GDSL-like Lipase/Acylhydrolase family JNE32_03750 PF09224 Domain of unknown function (DUF1961) JNE32_03755 PF04854 Protein of unknown function, DUF624 JNE32_03760 PF18370 Rhamnogalacturonan I lyases beta-sheet domain JNE32_03765 PF18370 Rhamnogalacturonan I lyases beta-sheet domain JNE32_03765 PF01839 FG-GAP repeat JNE32_03770 PF00657 GDSL-like Lipase/Acylhydrolase JNE32_03775 PF02449 Beta-galactosidase JNE32_03775 PF08532 Beta-galactosidase trimerisation domain JNE32_03775 PF08533 Beta-galactosidase C-terminal domain JNE32_03785 PF01547 Bacterial extracellular solute-binding protein JNE32_03790 PF00528 Binding-protein-dependent transport system inner membrane component JNE32_03795 PF00528 Binding-protein-dependent transport system inner membrane component JNE32_03800 PF11975 Family 4 glycosyl hydrolase C-terminal domain JNE32_03800 PF02056 Family 4 glycosyl hydrolase JNE32_03810 PF03992 Antibiotic biosynthesis monooxygenase JNE32_03815 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily JNE32_03825 PF01740 STAS domain JNE32_03830 PF10055 Uncharacterized small protein (DUF2292) JNE32_03835 PF01027 Inhibitor of apoptosis-promoting Bax1 JNE32_03840 PF00892 EamA-like transporter family JNE32_03845 PF01047 MarR family JNE32_03850 PF01494 FAD binding domain JNE32_03860 PF13037 Domain of unknown function (DUF3898) JNE32_03860 PF13039 Protein of unknown function (DUF3900) JNE32_03865 PF00258 Flavodoxin JNE32_03865 PF00175 Oxidoreductase NAD-binding domain JNE32_03865 PF00067 Cytochrome P450 JNE32_03865 PF00667 FAD binding domain JNE32_03870 PF00884 Sulfatase JNE32_03875 PF00483 Nucleotidyl transferase JNE32_03880 PF16363 GDP-mannose 4,6 dehydratase JNE32_03885 PF03407 Nucleotide-diphospho-sugar transferase JNE32_03890 PF00535 Glycosyl transferase family 2 JNE32_03895 PF03407 Nucleotide-diphospho-sugar transferase JNE32_03900 PF07690 Major Facilitator Superfamily JNE32_03905 PF13419 Haloacid dehalogenase-like hydrolase JNE32_03910 PF13520 Amino acid permease JNE32_03915 PF00171 Aldehyde dehydrogenase family JNE32_03920 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JNE32_03925 PF12848 ABC transporter JNE32_03925 PF00005 ABC transporter JNE32_03925 PF16326 ABC transporter C-terminal domain JNE32_03930 PF10787 Uncharacterised protein from bacillus cereus group JNE32_03935 PF13411 MerR HTH family regulatory protein JNE32_03940 PF07690 Major Facilitator Superfamily JNE32_03950 PF12848 ABC transporter JNE32_03950 PF00005 ABC transporter JNE32_03955 PF00271 Helicase conserved C-terminal domain JNE32_03955 PF00270 DEAD/DEAH box helicase JNE32_03960 PF00583 Acetyltransferase (GNAT) family JNE32_03965 PF00107 Zinc-binding dehydrogenase JNE32_03965 PF16884 N-terminal domain of oxidoreductase JNE32_03970 PF07690 Major Facilitator Superfamily JNE32_03975 PF03781 Sulfatase-modifying factor enzyme 1 JNE32_03980 PF00005 ABC transporter JNE32_03985 PF01032 FecCD transport family JNE32_03990 PF01032 FecCD transport family JNE32_03995 PF01497 Periplasmic binding protein JNE32_04000 PF11486 Protein of unknown function (DUF3212) JNE32_04005 PF11181 Heat induced stress protein YflT JNE32_04010 PF00544 Pectate lyase JNE32_04015 PF00939 Sodium:sulfate symporter transmembrane region JNE32_04020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JNE32_04020 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain JNE32_04025 PF08279 HTH domain JNE32_04025 PF12431 Transcriptional regulator JNE32_04025 PF00072 Response regulator receiver domain JNE32_04030 PF03401 Tripartite tricarboxylate transporter family receptor JNE32_04035 PF03600 Citrate transporter JNE32_04040 PF00753 Metallo-beta-lactamase superfamily JNE32_04045 PF02898 Nitric oxide synthase, oxygenase domain JNE32_04050 PF00708 Acylphosphatase JNE32_04055 PF03473 MOSC domain JNE32_04055 PF03475 3-alpha domain JNE32_04060 PF11121 Protein of unknown function (DUF2639) JNE32_04070 PF11588 Protein of unknown function (DUF3243) JNE32_04075 PF00557 Metallopeptidase family M24 JNE32_04080 PF00367 phosphotransferase system, EIIB JNE32_04080 PF02378 Phosphotransferase system, EIIC JNE32_04085 PF00884 Sulfatase JNE32_04095 PF09350 Domain of unknown function (DUF1992) JNE32_04100 PF01235 Sodium:alanine symporter family JNE32_04105 PF03845 Spore germination protein JNE32_04115 PF05504 Spore germination B3/ GerAC like, C-terminal JNE32_04120 PF03323 Bacillus/Clostridium GerA spore germination protein JNE32_04125 PF02378 Phosphotransferase system, EIIC JNE32_04125 PF00367 phosphotransferase system, EIIB JNE32_04130 PF16657 Maltogenic Amylase, C-terminal domain JNE32_04130 PF00128 Alpha amylase, catalytic domain JNE32_04135 PF07702 UTRA domain JNE32_04135 PF00392 Bacterial regulatory proteins, gntR family JNE32_04140 PF00881 Nitroreductase family JNE32_04145 PF02872 5'-nucleotidase, C-terminal domain JNE32_04145 PF00149 Calcineurin-like phosphoesterase JNE32_04150 PF01965 DJ-1/PfpI family JNE32_04155 PF07690 Major Facilitator Superfamily JNE32_04160 PF06569 Protein of unknown function (DUF1128) JNE32_04165 PF01451 Low molecular weight phosphotyrosine protein phosphatase JNE32_04175 PF03631 Virulence factor BrkB JNE32_04180 PF07690 Major Facilitator Superfamily JNE32_04185 PF01699 Sodium/calcium exchanger protein JNE32_04190 PF14167 YfkD-like protein JNE32_04195 PF00924 Mechanosensitive ion channel JNE32_04200 PF08756 YfkB-like domain JNE32_04200 PF04055 Radical SAM superfamily JNE32_04210 PF01522 Polysaccharide deacetylase JNE32_04215 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase JNE32_04215 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase JNE32_04220 PF01544 CorA-like Mg2+ transporter protein JNE32_04225 PF00730 HhH-GPD superfamily base excision DNA repair protein JNE32_04230 PF05958 tRNA (Uracil-5-)-methyltransferase JNE32_04230 PF01938 TRAM domain JNE32_04235 PF14118 YfzA-like protein JNE32_04240 PF01207 Dihydrouridine synthase (Dus) JNE32_04250 PF00676 Dehydrogenase E1 component JNE32_04255 PF02780 Transketolase, C-terminal domain JNE32_04255 PF02779 Transketolase, pyrimidine binding domain JNE32_04260 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) JNE32_04260 PF00364 Biotin-requiring enzyme JNE32_04260 PF02817 e3 binding domain JNE32_04265 PF07992 Pyridine nucleotide-disulphide oxidoreductase JNE32_04265 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain JNE32_04270 PF01590 GAF domain JNE32_04270 PF02954 Bacterial regulatory protein, Fis family JNE32_04270 PF00158 Sigma-54 interaction domain JNE32_04275 PF08141 Small acid-soluble spore protein H family JNE32_04280 PF02694 Uncharacterised BCR, YnfA/UPF0060 family JNE32_04285 PF17353 Family of unknown function (DUF5381) JNE32_04300 PF06013 Proteins of 100 residues with WXG JNE32_04305 PF02056 Family 4 glycosyl hydrolase JNE32_04305 PF11975 Family 4 glycosyl hydrolase C-terminal domain JNE32_04310 PF01380 SIS domain JNE32_04310 PF01418 Helix-turn-helix domain, rpiR family JNE32_04315 PF00367 phosphotransferase system, EIIB JNE32_04315 PF02378 Phosphotransferase system, EIIC JNE32_04320 PF12708 Pectate lyase superfamily protein JNE32_04320 PF11962 Peptidase_G2, IMC autoproteolytic cleavage domain JNE32_04325 PF00664 ABC transporter transmembrane region JNE32_04325 PF00005 ABC transporter JNE32_04330 PF00005 ABC transporter JNE32_04330 PF00664 ABC transporter transmembrane region JNE32_04335 PF07681 DoxX JNE32_04340 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily JNE32_04345 PF07730 Histidine kinase JNE32_04350 PF00196 Bacterial regulatory proteins, luxR family JNE32_04350 PF00072 Response regulator receiver domain JNE32_04355 PF00005 ABC transporter JNE32_04370 PF03551 Transcriptional regulator PadR-like family JNE32_04370 PF10400 Virulence activator alpha C-term JNE32_04375 PF01674 Lipase (class 2) JNE32_04380 PF01757 Acyltransferase family JNE32_04385 PF12867 DinB superfamily JNE32_04390 PF07690 Major Facilitator Superfamily JNE32_04395 PF01047 MarR family JNE32_04400 PF03706 Lysylphosphatidylglycerol synthase TM region JNE32_04400 PF09924 Uncharacterised conserved protein (DUF2156) JNE32_04405 PF01497 Periplasmic binding protein JNE32_04410 PF01032 FecCD transport family JNE32_04415 PF01032 FecCD transport family JNE32_04420 PF02567 Phenazine biosynthesis-like protein JNE32_04425 PF00881 Nitroreductase family JNE32_04430 PF14151 YfhD-like protein JNE32_04435 PF14152 YfhE-like protein JNE32_04440 PF01370 NAD dependent epimerase/dehydratase family JNE32_04440 PF08338 Domain of unknown function (DUF1731) JNE32_04445 PF02631 RecX family JNE32_04450 PF08838 Protein of unknown function (DUF1811) JNE32_04455 PF07690 Major Facilitator Superfamily JNE32_04460 PF08176 Small acid-soluble spore protein K family JNE32_04465 PF14043 WVELL protein JNE32_04470 PF08239 Bacterial SH3 domain JNE32_04475 PF13630 SdpI/YhfL protein family JNE32_04480 PF00561 alpha/beta hydrolase fold JNE32_04485 PF00535 Glycosyl transferase family 2 JNE32_04490 PF09586 Bacterial membrane protein YfhO JNE32_04495 PF04307 LexA-binding, inner membrane-associated putative hydrolase JNE32_04500 PF00730 HhH-GPD superfamily base excision DNA repair protein JNE32_04500 PF14815 NUDIX domain JNE32_04515 PF04259 Small, acid-soluble spore protein, gamma-type JNE32_04520 PF14182 YgaB-like protein JNE32_04525 PF04167 Protein of unknown function (DUF402) JNE32_04530 PF00664 ABC transporter transmembrane region JNE32_04530 PF00005 ABC transporter JNE32_04535 PF06081 Aromatic acid exporter family member 1 JNE32_04540 PF00202 Aminotransferase class-III JNE32_04545 PF00578 AhpC/TSA family JNE32_04550 PF01475 Ferric uptake regulator family JNE32_04555 PF11023 Zinc-ribbon containing domain JNE32_04560 PF14540 Nucleotidyltransferase-like JNE32_04560 PF18576 Helix-turn-helix domain JNE32_04660 PF07070 SpoOM protein JNE32_04670 PF07875 Coat F domain JNE32_04675 PF03575 Peptidase family S51 JNE32_04680 PF01964 Radical SAM ThiC family JNE32_04680 PF13667 ThiC-associated domain JNE32_04685 PF08031 Berberine and berberine like JNE32_04685 PF01565 FAD binding domain JNE32_04690 PF13040 Fur-regulated basic protein B JNE32_04695 PF00199 Catalase JNE32_04695 PF06628 Catalase-related immune-responsive JNE32_04700 PF00005 ABC transporter JNE32_04705 PF09084 NMT1/THI5 like JNE32_04710 PF00528 Binding-protein-dependent transport system inner membrane component JNE32_04715 PF00296 Luciferase-like monooxygenase JNE32_04725 PF00253 Ribosomal protein S14p/S29e JNE32_04735 PF01381 Helix-turn-helix JNE32_04750 PF08331 Domain of unknown function (DUF1730) JNE32_04755 PF12671 Putative amidase domain JNE32_04760 PF00588 SpoU rRNA Methylase family JNE32_04765 PF13171 Protein of unknown function (DUF4004) JNE32_04770 PF04519 Polymer-forming cytoskeletal JNE32_04780 PF08298 PrkA AAA domain JNE32_04780 PF06798 PrkA serine protein kinase C-terminal domain JNE32_04785 PF04285 Protein of unknown function (DUF444) JNE32_04790 PF01047 MarR family JNE32_04800 PF07690 Major Facilitator Superfamily JNE32_04805 PF03358 NADPH-dependent FMN reductase JNE32_04825 PF00392 Bacterial regulatory proteins, gntR family JNE32_04830 PF00005 ABC transporter JNE32_04835 PF00005 ABC transporter JNE32_04840 PF12679 ABC-2 family transporter protein JNE32_04845 PF00313 'Cold-shock' DNA-binding domain JNE32_04850 PF03180 NLPA lipoprotein JNE32_04855 PF00990 Diguanylate cyclase, GGDEF domain JNE32_04855 PF07694 5TMR of 5TMR-LYT JNE32_04860 PF00375 Sodium:dicarboxylate symporter family JNE32_04870 PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) JNE32_04880 PF07875 Coat F domain JNE32_04885 PF00565 Staphylococcal nuclease homologue JNE32_04885 PF00149 Calcineurin-like phosphoesterase JNE32_04885 PF00746 LPXTG cell wall anchor motif JNE32_04885 PF02872 5'-nucleotidase, C-terminal domain JNE32_04890 PF04203 Sortase domain JNE32_04895 PF01479 S4 domain JNE32_04895 PF00849 RNA pseudouridylate synthase JNE32_04900 PF17326 Family of unknown function (DUF5365) JNE32_04905 PF00571 CBS domain JNE32_04910 PF13419 Haloacid dehalogenase-like hydrolase JNE32_04915 PF00583 Acetyltransferase (GNAT) family JNE32_04915 PF00795 Carbon-nitrogen hydrolase JNE32_04920 PF00202 Aminotransferase class-III JNE32_04925 PF04309 Glycerol-3-phosphate responsive antiterminator JNE32_04930 PF00230 Major intrinsic protein JNE32_04935 PF02782 FGGY family of carbohydrate kinases, C-terminal domain JNE32_04935 PF00370 FGGY family of carbohydrate kinases, N-terminal domain JNE32_04940 PF16901 C-terminal domain of alpha-glycerophosphate oxidase JNE32_04940 PF01266 FAD dependent oxidoreductase JNE32_04945 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain JNE32_04945 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III JNE32_04945 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I JNE32_04945 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II JNE32_04950 PF13185 GAF domain JNE32_04950 PF07730 Histidine kinase JNE32_04955 PF00072 Response regulator receiver domain JNE32_04955 PF00196 Bacterial regulatory proteins, luxR family JNE32_04960 PF03358 NADPH-dependent FMN reductase JNE32_04965 PF14148 YhdB-like protein JNE32_04970 PF13028 Protein of unknown function (DUF3889) JNE32_04975 PF01476 LysM domain JNE32_04975 PF00877 NlpC/P60 family JNE32_04980 PF02082 Transcriptional regulator JNE32_04985 PF05552 Conserved TM helix JNE32_04990 PF04293 SpoVR like protein JNE32_04995 PF00245 Alkaline phosphatase JNE32_05000 PF01476 LysM domain JNE32_05000 PF00877 NlpC/P60 family JNE32_05005 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JNE32_05005 PF03466 LysR substrate binding domain JNE32_05010 PF00285 Citrate synthase, C-terminal domain JNE32_05020 PF13520 Amino acid permease JNE32_05025 PF00209 Sodium:neurotransmitter symporter family JNE32_05030 PF00392 Bacterial regulatory proteins, gntR family JNE32_05030 PF00155 Aminotransferase class I and II JNE32_05040 PF17453 Sigma-M inhibitor JNE32_05045 PF13800 Sigma factor regulator N-terminal JNE32_05045 PF13791 Sigma factor regulator C-terminal JNE32_05050 PF08281 Sigma-70, region 4 JNE32_05050 PF04542 Sigma-70 region 2 JNE32_05055 PF00248 Aldo/keto reductase family JNE32_05060 PF01553 Acyltransferase JNE32_05065 PF00571 CBS domain JNE32_05065 PF03471 Transporter associated domain JNE32_05065 PF01595 Cyclin M transmembrane N-terminal domain JNE32_05070 PF13411 MerR HTH family regulatory protein JNE32_05075 PF00155 Aminotransferase class I and II JNE32_05080 PF03471 Transporter associated domain JNE32_05080 PF00571 CBS domain JNE32_05080 PF01595 Cyclin M transmembrane N-terminal domain JNE32_05085 PF02537 CrcB-like protein, Camphor Resistance (CrcB) JNE32_05090 PF02537 CrcB-like protein, Camphor Resistance (CrcB) JNE32_05095 PF03009 Glycerophosphoryl diester phosphodiesterase family JNE32_05100 PF17444 Uncharacterized YhdX-like JNE32_05105 PF00924 Mechanosensitive ion channel JNE32_05110 PF02146 Sir2 family JNE32_05115 PF01522 Polysaccharide deacetylase JNE32_05120 PF01063 Amino-transferase class IV JNE32_05125 PF03553 Na+/H+ antiporter family JNE32_05130 PF00582 Universal stress protein family JNE32_05140 PF00664 ABC transporter transmembrane region JNE32_05140 PF00005 ABC transporter JNE32_05145 PF00005 ABC transporter JNE32_05145 PF00664 ABC transporter transmembrane region JNE32_05160 PF00269 Small, acid-soluble spore proteins, alpha/beta type JNE32_05165 PF17277 Family of unknown function (DUF5342) JNE32_05170 PF14398 YheC/D like ATP-grasp JNE32_05175 PF14398 YheC/D like ATP-grasp JNE32_05180 PF04286 Protein of unknown function (DUF445) JNE32_05185 PF06133 Control of competence regulator ComK, YlbF/YmcA JNE32_05190 PF08713 DNA alkylation repair enzyme JNE32_05200 PF04055 Radical SAM superfamily JNE32_05205 PF00999 Sodium/hydrogen exchanger family JNE32_05210 PF02080 TrkA-C domain JNE32_05220 PF00378 Enoyl-CoA hydratase/isomerase JNE32_05225 PF14120 YhzD-like protein JNE32_05230 PF00005 ABC transporter JNE32_05230 PF13732 Domain of unknown function (DUF4162) JNE32_05240 PF00149 Calcineurin-like phosphoesterase JNE32_05245 PF13514 AAA domain JNE32_05250 PF01966 HD domain JNE32_05255 PF14147 Sporulation protein YhaL JNE32_05265 PF09680 Family of unknown function JNE32_05270 PF09680 Family of unknown function JNE32_05280 PF11667 Putative zincin peptidase JNE32_05285 PF08963 Protein of unknown function (DUF1878) JNE32_05290 PF01047 MarR family JNE32_05295 PF12732 YtxH-like protein JNE32_05305 PF17099 Tryptophan transporter TrpP JNE32_05310 PF00266 Aminotransferase class-V JNE32_05315 PF01230 HIT domain JNE32_05320 PF00005 ABC transporter JNE32_05325 PF05975 Bacterial ABC transporter protein EcsB JNE32_05330 PF12787 EcsC protein family JNE32_05335 PF01546 Peptidase family M20/M25/M40 JNE32_05335 PF07687 Peptidase dimerisation domain JNE32_05350 PF03992 Antibiotic biosynthesis monooxygenase JNE32_05355 PF00912 Transglycosylase JNE32_05355 PF00905 Penicillin binding protein transpeptidase domain JNE32_05360 PF01208 Uroporphyrinogen decarboxylase (URO-D) JNE32_05365 PF00762 Ferrochelatase JNE32_05370 PF01593 Flavin containing amine oxidoreductase JNE32_05375 PF17932 Tetracyclin repressor-like, C-terminal domain JNE32_05375 PF00440 Bacterial regulatory proteins, tetR family JNE32_05390 PF10086 YhfC intramembrane metalloprotease JNE32_05400 PF05343 M42 glutamyl aminopeptidase JNE32_05405 PF04266 ASCH domain JNE32_05410 PF00375 Sodium:dicarboxylate symporter family JNE32_05415 PF14149 YhfH-like protein JNE32_05420 PF12706 Beta-lactamase superfamily domain JNE32_05425 PF10437 Bacterial lipoate protein ligase C-terminus JNE32_05425 PF03099 Biotin/lipoate A/B protein ligase family JNE32_05430 PF13460 NAD(P)H-binding JNE32_05435 PF13193 AMP-binding enzyme C-terminal domain JNE32_05435 PF00501 AMP-binding enzyme JNE32_05445 PF16491 CAAX prenyl protease N-terminal, five membrane helices JNE32_05445 PF01435 Peptidase family M48 JNE32_05450 PF00082 Subtilase family JNE32_05450 PF05922 Peptidase inhibitor I9 JNE32_05460 PF08240 Alcohol dehydrogenase GroES-like domain JNE32_05460 PF00107 Zinc-binding dehydrogenase JNE32_05465 PF01497 Periplasmic binding protein JNE32_05470 PF00300 Histidine phosphatase superfamily (branch 1) JNE32_05475 PF00108 Thiolase, N-terminal domain JNE32_05475 PF02803 Thiolase, C-terminal domain JNE32_05480 PF13193 AMP-binding enzyme C-terminal domain JNE32_05480 PF00501 AMP-binding enzyme JNE32_05485 PF02632 BioY family JNE32_05490 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JNE32_05495 PF00355 Rieske [2Fe-2S] domain JNE32_05495 PF01266 FAD dependent oxidoreductase JNE32_05510 PF06338 ComK protein JNE32_05520 PF05901 Excalibur calcium-binding domain JNE32_05525 PF00474 Sodium:solute symporter family JNE32_05530 PF11755 Protein of unknown function (DUF3311) JNE32_05540 PF09335 SNARE associated Golgi protein JNE32_05545 PF10502 Signal peptidase, peptidase S26 JNE32_05550 PF01494 FAD binding domain JNE32_05555 PF01047 MarR family JNE32_05560 PF07690 Major Facilitator Superfamily JNE32_05565 PF01408 Oxidoreductase family, NAD-binding Rossmann fold JNE32_05565 PF02894 Oxidoreductase family, C-terminal alpha/beta domain JNE32_05570 PF05116 Sucrose-6F-phosphate phosphohydrolase JNE32_05575 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family JNE32_05580 PF00356 Bacterial regulatory proteins, lacI family JNE32_05585 PF05145 Transition state regulatory protein AbrB JNE32_05590 PF07690 Major Facilitator Superfamily JNE32_05595 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle JNE32_05595 PF12793 Sugar transport-related sRNA regulator N-term JNE32_05600 PF03860 Domain of Unknown Function (DUF326) JNE32_05605 PF02915 Rubrerythrin JNE32_05610 PF13361 UvrD-like helicase C-terminal domain JNE32_05610 PF12705 PD-(D/E)XK nuclease superfamily JNE32_05615 PF12705 PD-(D/E)XK nuclease superfamily JNE32_05615 PF00580 UvrD/REP helicase N-terminal domain JNE32_05615 PF13361 UvrD-like helicase C-terminal domain JNE32_05620 PF00149 Calcineurin-like phosphoesterase JNE32_05620 PF12320 Type 5 capsule protein repressor C-terminal domain JNE32_05625 PF13476 AAA domain JNE32_05635 PF10676 Spore germination protein gerPA/gerPF JNE32_05640 PF10970 Spore germination protein GerPE JNE32_05650 PF10737 Spore germination protein GerPC JNE32_05655 PF10803 Spore germination GerPB JNE32_05660 PF10676 Spore germination protein gerPA/gerPF JNE32_05665 PF09388 Spo0E like sporulation regulatory protein JNE32_05670 PF08757 CotH kinase protein JNE32_05675 PF01557 Fumarylacetoacetate (FAA) hydrolase family JNE32_05680 PF07457 Protein of unknown function (DUF1516) JNE32_05685 PF00082 Subtilase family JNE32_05685 PF17936 Bacterial Ig domain JNE32_05690 PF10949 Protein of unknown function (DUF2777) JNE32_05695 PF13537 Glutamine amidotransferase domain JNE32_05695 PF00733 Asparagine synthase JNE32_05700 PF05163 DinB family JNE32_05710 PF01554 MatE JNE32_05715 PF02311 AraC-like ligand binding domain JNE32_05715 PF12833 Helix-turn-helix domain JNE32_05720 PF00356 Bacterial regulatory proteins, lacI family JNE32_05725 PF02894 Oxidoreductase family, C-terminal alpha/beta domain JNE32_05725 PF01408 Oxidoreductase family, NAD-binding Rossmann fold JNE32_05730 PF05163 DinB family JNE32_05735 PF01810 LysE type translocator JNE32_05740 PF00155 Aminotransferase class I and II JNE32_05740 PF00392 Bacterial regulatory proteins, gntR family JNE32_05745 PF13599 Pentapeptide repeats (9 copies) JNE32_05750 PF08386 TAP-like protein JNE32_05750 PF00561 alpha/beta hydrolase fold JNE32_05760 PF14306 PUA-like domain JNE32_05760 PF01747 ATP-sulfurylase JNE32_05765 PF01507 Phosphoadenosine phosphosulfate reductase family JNE32_05770 PF04029 2-phosphosulpholactate phosphatase JNE32_05775 PF02679 (2R)-phospho-3-sulfolactate synthase (ComA) JNE32_05780 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 JNE32_05785 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain JNE32_05785 PF13378 Enolase C-terminal domain-like JNE32_05790 PF07690 Major Facilitator Superfamily JNE32_05795 PF13673 Acetyltransferase (GNAT) domain JNE32_05795 PF18014 Acetyltransferase (GNAT) domain JNE32_05800 PF13673 Acetyltransferase (GNAT) domain JNE32_05805 PF02574 Homocysteine S-methyltransferase JNE32_05805 PF02219 Methylenetetrahydrofolate reductase JNE32_05810 PF04461 Protein of unknown function (DUF520) JNE32_05815 PF13509 S1 domain JNE32_05815 PF17783 CvfB-like winged helix domain JNE32_05830 PF17418 Sporulation delaying protein SdpA JNE32_05835 PF03551 Transcriptional regulator PadR-like family JNE32_05845 PF12650 Domain of unknown function (DUF3784) JNE32_05850 PF02868 Thermolysin metallopeptidase, alpha-helical domain JNE32_05850 PF07504 Fungalysin/Thermolysin Propeptide Motif JNE32_05850 PF03413 Peptidase propeptide and YPEB domain JNE32_05850 PF01447 Thermolysin metallopeptidase, catalytic domain JNE32_05855 PF02645 Uncharacterised protein, DegV family COG1307 JNE32_05860 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 JNE32_05860 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) JNE32_05865 PF12690 Intracellular proteinase inhibitor JNE32_05870 PF12758 Protein of unknown function (DUF3813) JNE32_05885 PF00326 Prolyl oligopeptidase family JNE32_05890 PF01883 Iron-sulfur cluster assembly protein JNE32_05900 PF01565 FAD binding domain JNE32_05905 PF07690 Major Facilitator Superfamily JNE32_05910 PF02774 Semialdehyde dehydrogenase, dimerisation domain JNE32_05910 PF01118 Semialdehyde dehydrogenase, NAD binding domain JNE32_05915 PF01960 ArgJ family JNE32_05920 PF00696 Amino acid kinase family JNE32_05925 PF00202 Aminotransferase class-III JNE32_05930 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain JNE32_05930 PF00117 Glutamine amidotransferase class-I JNE32_05935 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain JNE32_05935 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain JNE32_05940 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain JNE32_05940 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain JNE32_05945 PF14168 YjzC-like protein JNE32_05950 PF11151 Protein of unknown function (DUF2929) JNE32_05965 PF02608 ABC transporter substrate-binding protein PnrA-like JNE32_05970 PF10815 ComZ JNE32_05980 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal JNE32_05980 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III JNE32_05985 PF02801 Beta-ketoacyl synthase, C-terminal domain JNE32_05985 PF00109 Beta-ketoacyl synthase, N-terminal domain JNE32_05990 PF10026 Predicted Zn-dependent protease (DUF2268) JNE32_05995 PF08352 Oligopeptide/dipeptide transporter, C-terminal region JNE32_05995 PF00005 ABC transporter JNE32_06000 PF08352 Oligopeptide/dipeptide transporter, C-terminal region JNE32_06000 PF00005 ABC transporter JNE32_06005 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle JNE32_06010 PF00528 Binding-protein-dependent transport system inner membrane component JNE32_06015 PF12911 N-terminal TM domain of oligopeptide transport permease C JNE32_06015 PF00528 Binding-protein-dependent transport system inner membrane component JNE32_06020 PF12227 Protein of unknown function (DUF3603) JNE32_06025 PF00579 tRNA synthetases class I (W and Y) JNE32_06030 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle JNE32_06035 PF00528 Binding-protein-dependent transport system inner membrane component JNE32_06040 PF12911 N-terminal TM domain of oligopeptide transport permease C JNE32_06040 PF00528 Binding-protein-dependent transport system inner membrane component JNE32_06045 PF08352 Oligopeptide/dipeptide transporter, C-terminal region JNE32_06045 PF00005 ABC transporter JNE32_06050 PF08352 Oligopeptide/dipeptide transporter, C-terminal region JNE32_06050 PF00005 ABC transporter JNE32_06055 PF07690 Major Facilitator Superfamily JNE32_06060 PF13508 Acetyltransferase (GNAT) domain JNE32_06065 PF03960 ArsC family JNE32_06070 PF03741 Integral membrane protein TerC family JNE32_06080 PF05389 Negative regulator of genetic competence (MecA) JNE32_06090 PF06054 Competence protein CoiA-like family JNE32_06095 PF08439 Oligopeptidase F JNE32_06095 PF01432 Peptidase family M3 JNE32_06110 PF01152 Bacterial-like globin JNE32_06115 PF01464 Transglycosylase SLT domain JNE32_06120 PF01928 CYTH domain JNE32_06130 PF04607 Region found in RelA / SpoT proteins JNE32_06135 PF01513 ATP-NAD kinase JNE32_06140 PF00849 RNA pseudouridylate synthase JNE32_06145 PF00149 Calcineurin-like phosphoesterase JNE32_06150 PF00999 Sodium/hydrogen exchanger family JNE32_06150 PF02080 TrkA-C domain JNE32_06150 PF02254 TrkA-N domain JNE32_06155 PF03070 TENA/THI-4/PQQC family JNE32_06160 PF02581 Thiamine monophosphate synthase JNE32_06165 PF01266 FAD dependent oxidoreductase JNE32_06170 PF02597 ThiS family JNE32_06175 PF05690 Thiazole biosynthesis protein ThiG JNE32_06180 PF00899 ThiF family JNE32_06185 PF08543 Phosphomethylpyrimidine kinase JNE32_06195 PF14153 Spore coat protein CotO JNE32_06200 PF10612 Spore coat protein Z JNE32_06205 PF10612 Spore coat protein Z JNE32_06210 PF07552 Spore Coat Protein X and V domain JNE32_06220 PF07552 Spore Coat Protein X and V domain JNE32_06225 PF07098 Protein of unknown function (DUF1360) JNE32_06240 PF14069 Stage VI sporulation protein F JNE32_06245 PF13361 UvrD-like helicase C-terminal domain JNE32_06245 PF00580 UvrD/REP helicase N-terminal domain JNE32_06255 PF13673 Acetyltransferase (GNAT) domain JNE32_06265 PF00756 Putative esterase JNE32_06270 PF01053 Cys/Met metabolism PLP-dependent enzyme JNE32_06275 PF01053 Cys/Met metabolism PLP-dependent enzyme JNE32_06285 PF05684 Protein of unknown function (DUF819) JNE32_06310 PF04740 LXG domain of WXG superfamily JNE32_06310 PF14411 A nuclease of the HNH/ENDO VII superfamily with conserved LHH JNE32_06350 PF03992 Antibiotic biosynthesis monooxygenase JNE32_06360 PF02368 Bacterial Ig-like domain (group 2) JNE32_06365 PF05043 Mga helix-turn-helix domain JNE32_06365 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 JNE32_06365 PF00874 PRD domain JNE32_06365 PF08279 HTH domain JNE32_06370 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit JNE32_06370 PF02378 Phosphotransferase system, EIIC JNE32_06370 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 JNE32_06375 PF01238 Phosphomannose isomerase type I JNE32_06380 PF11208 Protein of unknown function (DUF2992) JNE32_06385 PF13302 Acetyltransferase (GNAT) domain JNE32_06395 PF04073 Aminoacyl-tRNA editing domain JNE32_06400 PF13783 Domain of unknown function (DUF4177) JNE32_06405 PF14154 Domain of unknown function (DUF4306) JNE32_06410 PF01040 UbiA prenyltransferase family JNE32_06420 PF13739 Deacetylase PdaC JNE32_06420 PF01522 Polysaccharide deacetylase JNE32_06420 PF11738 Protein of unknown function (DUF3298) JNE32_06425 PF10901 Protein of unknown function (DUF2690) JNE32_06430 PF14070 Putative motility protein JNE32_06435 PF10026 Predicted Zn-dependent protease (DUF2268) JNE32_06440 PF10990 Protein of unknown function (DUF2809) JNE32_06445 PF14172 Domain of unknown function (DUF4309) JNE32_06450 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region JNE32_06450 PF01568 Molydopterin dinucleotide binding domain JNE32_06450 PF00384 Molybdopterin oxidoreductase JNE32_06450 PF04879 Molybdopterin oxidoreductase Fe4S4 domain JNE32_06450 PF12838 4Fe-4S dicluster domain JNE32_06455 PF07849 Protein of unknown function (DUF1641) JNE32_06460 PF11611 Domain of unknown function (DUF4352) JNE32_06465 PF00293 NUDIX domain JNE32_06475 PF00067 Cytochrome P450 JNE32_06480 PF04101 Glycosyltransferase family 28 C-terminal domain JNE32_06490 PF02602 Uroporphyrinogen-III synthase HemD JNE32_06495 PF03649 Uncharacterised protein family (UPF0014) JNE32_06500 PF00005 ABC transporter JNE32_06505 PF13536 Putative multidrug resistance efflux transporter JNE32_06515 PF07849 Protein of unknown function (DUF1641) JNE32_06520 PF07992 Pyridine nucleotide-disulphide oxidoreductase JNE32_06525 PF02614 Glucuronate isomerase JNE32_06535 PF02615 Malate/L-lactate dehydrogenase JNE32_06540 PF00107 Zinc-binding dehydrogenase JNE32_06540 PF08240 Alcohol dehydrogenase GroES-like domain JNE32_06545 PF03786 D-mannonate dehydratase (UxuA) JNE32_06550 PF00106 short chain dehydrogenase JNE32_06555 PF07690 Major Facilitator Superfamily JNE32_06560 PF00356 Bacterial regulatory proteins, lacI family JNE32_06565 PF01232 Mannitol dehydrogenase Rossmann domain JNE32_06565 PF08125 Mannitol dehydrogenase C-terminal domain JNE32_06570 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus JNE32_06570 PF08666 SAF domain JNE32_06575 PF01925 Sulfite exporter TauE/SafE JNE32_06580 PF05163 DinB family JNE32_06585 PF00004 ATPase family associated with various cellular activities (AAA) JNE32_06590 PF18801 response regulator aspartate phosphatase H, N terminal JNE32_06600 PF03795 YCII-related domain JNE32_06605 PF01471 Putative peptidoglycan binding domain JNE32_06605 PF01476 LysM domain JNE32_06605 PF01510 N-acetylmuramoyl-L-alanine amidase JNE32_06610 PF08000 Bacterial PH domain JNE32_06615 PF05908 Poly-gamma-glutamate hydrolase JNE32_06620 PF05067 Manganese containing catalase JNE32_06625 PF06114 IrrE N-terminal-like domain JNE32_06630 PF01381 Helix-turn-helix JNE32_06645 PF01695 IstB-like ATP binding protein JNE32_06660 PF17356 Phage-like element PBSX protein XtrA JNE32_06665 PF08281 Sigma-70, region 4 JNE32_06670 PF03592 Terminase small subunit JNE32_06670 PF10668 Phage terminase small subunit JNE32_06675 PF04466 Phage terminase large subunit JNE32_06675 PF17288 Terminase RNAseH like domain JNE32_06680 PF04860 Phage portal protein JNE32_06685 PF14550 Putative phage serine protease XkdF JNE32_06690 PF05065 Phage capsid family JNE32_06695 PF11436 Protein of unknown function (DUF3199) JNE32_06700 PF12206 Domain of unknown function (DUF3599) JNE32_06705 PF04883 Bacteriophage HK97-gp10, putative tail-component JNE32_06720 PF17481 Phage tail sheath protein beta-sandwich domain JNE32_06720 PF17482 Phage tail sheath C-terminal domain JNE32_06720 PF04984 Phage tail sheath protein subtilisin-like domain JNE32_06725 PF09393 Phage tail tube protein JNE32_06730 PF08890 Phage XkdN-like tail assembly chaperone protein, TAC JNE32_06745 PF01476 LysM domain JNE32_06755 PF10844 Protein of unknown function (DUF2577) JNE32_06760 PF10934 Protein of unknown function (DUF2634) JNE32_06765 PF04865 Baseplate J-like protein JNE32_06770 PF10076 Uncharacterised protein conserved in bacteria (DUF2313) JNE32_06785 PF09636 XkdW protein JNE32_06790 PF09693 Phage uncharacterised protein (Phage_XkdX) JNE32_06800 PF10779 Haemolysin XhlA JNE32_06805 PF04688 SPP1 phage holin JNE32_06810 PF01510 N-acetylmuramoyl-L-alanine amidase JNE32_06810 PF01471 Putative peptidoglycan binding domain JNE32_06810 PF01476 LysM domain JNE32_06820 PF14185 Antitoxin SpoIISB, type II toxin-antitoxin system JNE32_06825 PF14171 Toxin SpoIISA, type II toxin-antitoxin system JNE32_06830 PF01384 Phosphate transporter family JNE32_06835 PF01865 Protein of unknown function DUF47 JNE32_06840 PF13520 Amino acid permease JNE32_06845 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily JNE32_06850 PF13231 Dolichyl-phosphate-mannose-protein mannosyltransferase JNE32_06855 PF00535 Glycosyl transferase family 2 JNE32_06860 PF13180 PDZ domain JNE32_06865 PF14748 Pyrroline-5-carboxylate reductase dimerisation JNE32_06865 PF03807 NADP oxidoreductase coenzyme F420-dependent JNE32_06870 PF04951 D-aminopeptidase JNE32_06875 PF00528 Binding-protein-dependent transport system inner membrane component JNE32_06880 PF00528 Binding-protein-dependent transport system inner membrane component JNE32_06880 PF12911 N-terminal TM domain of oligopeptide transport permease C JNE32_06885 PF00005 ABC transporter JNE32_06885 PF08352 Oligopeptide/dipeptide transporter, C-terminal region JNE32_06890 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle JNE32_06895 PF02016 LD-carboxypeptidase N-terminal domain JNE32_06895 PF17676 LD-carboxypeptidase C-terminal domain JNE32_06900 PF13378 Enolase C-terminal domain-like JNE32_06900 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain JNE32_06905 PF00877 NlpC/P60 family JNE32_06910 PF00005 ABC transporter JNE32_06910 PF08352 Oligopeptide/dipeptide transporter, C-terminal region JNE32_06915 PF10282 Lactonase, 7-bladed beta-propeller JNE32_06925 PF03061 Thioesterase superfamily JNE32_06930 PF00042 Globin JNE32_06930 PF00175 Oxidoreductase NAD-binding domain JNE32_06930 PF00970 Oxidoreductase FAD-binding domain JNE32_06940 PF04239 Protein of unknown function (DUF421) JNE32_06945 PF12867 DinB superfamily JNE32_06950 PF13302 Acetyltransferase (GNAT) domain JNE32_06955 PF00893 Small Multidrug Resistance protein JNE32_06960 PF00893 Small Multidrug Resistance protein JNE32_06965 PF00551 Formyl transferase JNE32_06965 PF01842 ACT domain JNE32_06970 PF01472 PUA domain JNE32_06970 PF00696 Amino acid kinase family JNE32_06975 PF00171 Aldehyde dehydrogenase family JNE32_06980 PF02566 OsmC-like protein JNE32_06985 PF01047 MarR family JNE32_06990 PF02566 OsmC-like protein JNE32_07000 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region JNE32_07005 PF01717 Cobalamin-independent synthase, Catalytic domain JNE32_07005 PF08267 Cobalamin-independent synthase, N-terminal domain JNE32_07010 PF00082 Subtilase family JNE32_07015 PF01740 STAS domain JNE32_07020 PF02361 Cobalt transport protein JNE32_07025 PF00005 ABC transporter JNE32_07030 PF09819 ABC-type cobalt transport system, permease component JNE32_07035 PF07615 YKOF-related Family JNE32_07040 PF00486 Transcriptional regulatory protein, C terminal JNE32_07040 PF00072 Response regulator receiver domain JNE32_07045 PF00512 His Kinase A (phospho-acceptor) domain JNE32_07045 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JNE32_07045 PF00672 HAMP domain JNE32_07050 PF03413 Peptidase propeptide and YPEB domain JNE32_07055 PF03413 Peptidase propeptide and YPEB domain JNE32_07060 PF11132 Transcriptional regulator protein (SplA) JNE32_07065 PF03448 MgtE intracellular N domain JNE32_07065 PF01769 Divalent cation transporter JNE32_07065 PF00571 CBS domain JNE32_07070 PF13411 MerR HTH family regulatory protein JNE32_07085 PF01047 MarR family JNE32_07090 PF06925 Monogalactosyldiacylglycerol (MGDG) synthase JNE32_07100 PF00149 Calcineurin-like phosphoesterase JNE32_07110 PF00535 Glycosyl transferase family 2 JNE32_07115 PF01068 ATP dependent DNA ligase domain JNE32_07120 PF02735 Ku70/Ku80 beta-barrel domain JNE32_07125 PF00990 Diguanylate cyclase, GGDEF domain JNE32_07125 PF00563 EAL domain JNE32_07125 PF03707 Bacterial signalling protein N terminal repeat JNE32_07130 PF09335 SNARE associated Golgi protein JNE32_07135 PF03741 Integral membrane protein TerC family JNE32_07140 PF04542 Sigma-70 region 2 JNE32_07145 PF12791 Anti-sigma factor N-terminus JNE32_07150 PF00269 Small, acid-soluble spore proteins, alpha/beta type JNE32_07155 PF08876 Domain of unknown function (DUF1836) JNE32_07160 PF01435 Peptidase family M48 JNE32_07165 PF02386 Cation transport protein JNE32_07180 PF01757 Acyltransferase family JNE32_07185 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JNE32_07185 PF00512 His Kinase A (phospho-acceptor) domain JNE32_07185 PF00989 PAS fold JNE32_07185 PF13188 PAS domain JNE32_07185 PF13426 PAS domain JNE32_07190 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain JNE32_07190 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain JNE32_07200 PF01008 Initiation factor 2 subunit family JNE32_07205 PF01636 Phosphotransferase enzyme family JNE32_07210 PF00795 Carbon-nitrogen hydrolase JNE32_07215 PF00155 Aminotransferase class I and II JNE32_07220 PF00016 Ribulose bisphosphate carboxylase large chain, catalytic domain JNE32_07220 PF02788 Ribulose bisphosphate carboxylase large chain, N-terminal domain JNE32_07230 PF00596 Class II Aldolase and Adducin N-terminal domain JNE32_07235 PF03079 ARD/ARD' family JNE32_07240 PF06803 Protein of unknown function (DUF1232) JNE32_07245 PF09388 Spo0E like sporulation regulatory protein JNE32_07255 PF02743 Cache domain JNE32_07255 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JNE32_07255 PF00512 His Kinase A (phospho-acceptor) domain JNE32_07260 PF01047 MarR family JNE32_07265 PF13677 Membrane MotB of proton-channel complex MotA/MotB JNE32_07265 PF00691 OmpA family JNE32_07270 PF01618 MotA/TolQ/ExbB proton channel family JNE32_07275 PF00004 ATPase family associated with various cellular activities (AAA) JNE32_07275 PF07724 AAA domain (Cdc48 subfamily) JNE32_07275 PF10431 C-terminal, D2-small domain, of ClpB protein JNE32_07275 PF17871 AAA lid domain JNE32_07285 PF06508 Queuosine biosynthesis protein QueC JNE32_07290 PF01242 6-pyruvoyl tetrahydropterin synthase JNE32_07295 PF04055 Radical SAM superfamily JNE32_07300 PF14489 QueF-like protein JNE32_07305 PF01638 HxlR-like helix-turn-helix JNE32_07315 PF01476 LysM domain JNE32_07320 PF01476 LysM domain JNE32_07325 PF00704 Glycosyl hydrolases family 18 JNE32_07330 PF11514 Protein of unknown function (DUF3219) JNE32_07335 PF09953 Uncharacterized protein conserved in bacteria (DUF2187) JNE32_07345 PF07486 Cell Wall Hydrolase JNE32_07350 PF01943 Polysaccharide biosynthesis protein JNE32_07355 PF00578 AhpC/TSA family JNE32_07370 PF01321 Creatinase/Prolidase N-terminal domain JNE32_07370 PF00557 Metallopeptidase family M24 JNE32_07375 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family JNE32_07375 PF00356 Bacterial regulatory proteins, lacI family JNE32_07380 PF00874 PRD domain JNE32_07380 PF03123 CAT RNA binding domain JNE32_07385 PF02378 Phosphotransferase system, EIIC JNE32_07385 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 JNE32_07385 PF00367 phosphotransferase system, EIIB JNE32_07390 PF00381 PTS HPr component phosphorylation site JNE32_07395 PF05524 PEP-utilising enzyme, N-terminal JNE32_07395 PF00391 PEP-utilising enzyme, mobile domain JNE32_07395 PF02896 PEP-utilising enzyme, TIM barrel domain JNE32_07400 PF11132 Transcriptional regulator protein (SplA) JNE32_07410 PF00583 Acetyltransferase (GNAT) family JNE32_07415 PF02743 Cache domain JNE32_07415 PF00672 HAMP domain JNE32_07415 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JNE32_07420 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase JNE32_07420 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase JNE32_07425 PF00188 Cysteine-rich secretory protein family JNE32_07430 PF00905 Penicillin binding protein transpeptidase domain JNE32_07430 PF03717 Penicillin-binding Protein dimerisation domain JNE32_07435 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JNE32_07435 PF00512 His Kinase A (phospho-acceptor) domain JNE32_07435 PF00989 PAS fold JNE32_07435 PF08447 PAS fold JNE32_07440 PF00155 Aminotransferase class I and II JNE32_07450 PF00072 Response regulator receiver domain JNE32_07450 PF01584 CheW-like domain JNE32_07455 PF14177 YkyB-like protein JNE32_07460 PF07690 Major Facilitator Superfamily JNE32_07465 PF01476 LysM domain JNE32_07465 PF03734 L,D-transpeptidase catalytic domain JNE32_07470 PF00149 Calcineurin-like phosphoesterase JNE32_07470 PF10518 TAT (twin-arginine translocation) pathway signal sequence JNE32_07480 PF00563 EAL domain JNE32_07480 PF10388 EAL-domain associated signalling protein domain JNE32_07485 PF08796 Protein of unknown function (DUF1797) JNE32_07490 PF04308 Ribonuclease H-like JNE32_07495 PF14156 Antirepressor AbbA JNE32_07505 PF03466 LysR substrate binding domain JNE32_07505 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JNE32_07510 PF00258 Flavodoxin JNE32_07520 PF00258 Flavodoxin JNE32_07525 PF00132 Bacterial transferase hexapeptide (six repeats) JNE32_07525 PF14602 Hexapeptide repeat of succinyl-transferase JNE32_07525 PF08503 Tetrahydrodipicolinate succinyltransferase N-terminal JNE32_07530 PF01546 Peptidase family M20/M25/M40 JNE32_07530 PF07687 Peptidase dimerisation domain JNE32_07535 PF03698 Uncharacterised protein family (UPF0180) JNE32_07540 PF00924 Mechanosensitive ion channel JNE32_07545 PF00578 AhpC/TSA family JNE32_07545 PF10417 C-terminal domain of 1-Cys peroxiredoxin JNE32_07550 PF00578 AhpC/TSA family JNE32_07565 PF12804 MobA-like NTP transferase domain JNE32_07570 PF00899 ThiF family JNE32_07575 PF03453 MoeA N-terminal region (domain I and II) JNE32_07575 PF03454 MoeA C-terminal region (domain IV) JNE32_07575 PF00994 Probable molybdopterin binding domain JNE32_07580 PF03205 Molybdopterin guanine dinucleotide synthesis protein B JNE32_07585 PF02391 MoaE protein JNE32_07590 PF02597 ThiS family JNE32_07595 PF00005 ABC transporter JNE32_07595 PF00664 ABC transporter transmembrane region JNE32_07600 PF00005 ABC transporter JNE32_07600 PF00664 ABC transporter transmembrane region JNE32_07605 PF04893 Yip1 domain JNE32_07610 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion JNE32_07615 PF00005 ABC transporter JNE32_07620 PF02687 FtsX-like permease family JNE32_07620 PF12704 MacB-like periplasmic core domain JNE32_07625 PF08220 DeoR-like helix-turn-helix domain JNE32_07625 PF00455 DeoR C terminal sensor domain JNE32_07630 PF00294 pfkB family carbohydrate kinase JNE32_07635 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit JNE32_07635 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 JNE32_07640 PF10502 Signal peptidase, peptidase S26 JNE32_07650 PF12848 ABC transporter JNE32_07650 PF00005 ABC transporter JNE32_07655 PF08546 Ketopantoate reductase PanE/ApbA C terminal JNE32_07655 PF02558 Ketopantoate reductase PanE/ApbA JNE32_07660 PF02073 Thermophilic metalloprotease (M29) JNE32_07665 PF17447 Uncharacterized YkpC-like JNE32_07675 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin JNE32_07675 PF18277 AbrB C-terminal domain JNE32_07680 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JNE32_07680 PF00989 PAS fold JNE32_07680 PF00512 His Kinase A (phospho-acceptor) domain JNE32_07690 PF02080 TrkA-C domain JNE32_07690 PF02254 TrkA-N domain JNE32_07695 PF13382 Adenine deaminase C-terminal domain JNE32_07695 PF01979 Amidohydrolase family JNE32_07700 PF17770 Ribonuclease J C-terminal domain JNE32_07700 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain JNE32_07700 PF00753 Metallo-beta-lactamase superfamily JNE32_07705 PF07288 Protein of unknown function (DUF1447) JNE32_07715 PF01327 Polypeptide deformylase JNE32_07725 PF10368 Putative cell-wall binding lipoprotein JNE32_07730 PF00676 Dehydrogenase E1 component JNE32_07735 PF02780 Transketolase, C-terminal domain JNE32_07735 PF02779 Transketolase, pyrimidine binding domain JNE32_07740 PF02817 e3 binding domain JNE32_07740 PF00364 Biotin-requiring enzyme JNE32_07740 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) JNE32_07745 PF07992 Pyridine nucleotide-disulphide oxidoreductase JNE32_07745 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain JNE32_07755 PF13790 SR1 protein JNE32_07760 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain JNE32_07760 PF01276 Orn/Lys/Arg decarboxylase, major domain JNE32_07765 PF05256 Uncharacterised protein family (UPF0223) JNE32_07770 PF06335 Protein of unknown function (DUF1054) JNE32_07780 PF00459 Inositol monophosphatase family JNE32_07785 PF00583 Acetyltransferase (GNAT) family JNE32_07790 PF04072 Leucine carboxyl methyltransferase JNE32_07795 PF07504 Fungalysin/Thermolysin Propeptide Motif JNE32_07795 PF03413 Peptidase propeptide and YPEB domain JNE32_07795 PF01447 Thermolysin metallopeptidase, catalytic domain JNE32_07795 PF02868 Thermolysin metallopeptidase, alpha-helical domain JNE32_07810 PF04542 Sigma-70 region 2 JNE32_07810 PF08281 Sigma-70, region 4 JNE32_07815 PF13490 Putative zinc-finger JNE32_07825 PF17259 Family of unknown function (DUF5325) JNE32_07830 PF00679 Elongation factor G C-terminus JNE32_07830 PF14492 Elongation Factor G, domain II JNE32_07830 PF00009 Elongation factor Tu GTP binding domain JNE32_07830 PF03144 Elongation factor Tu domain 2 JNE32_07835 PF14036 YlaH-like protein JNE32_07840 PF09963 Uncharacterized protein conserved in bacteria (DUF2197) JNE32_07845 PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) JNE32_07850 PF02562 PhoH-like protein JNE32_07850 PF13638 PIN domain JNE32_07860 PF04960 Glutaminase JNE32_07865 PF07408 Protein of unknown function (DUF1507) JNE32_07870 PF01098 Cell cycle protein JNE32_07875 PF02436 Conserved carboxylase domain JNE32_07875 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain JNE32_07875 PF00364 Biotin-requiring enzyme JNE32_07875 PF00289 Biotin carboxylase, N-terminal domain JNE32_07875 PF02785 Biotin carboxylase C-terminal domain JNE32_07875 PF00682 HMGL-like JNE32_07880 PF02628 Cytochrome oxidase assembly protein JNE32_07885 PF01040 UbiA prenyltransferase family JNE32_07890 PF02790 Cytochrome C oxidase subunit II, transmembrane domain JNE32_07890 PF00116 Cytochrome C oxidase subunit II, periplasmic domain JNE32_07890 PF00034 Cytochrome c JNE32_07895 PF00115 Cytochrome C and Quinol oxidase polypeptide I JNE32_07900 PF00510 Cytochrome c oxidase subunit III JNE32_07905 PF03626 Prokaryotic Cytochrome C oxidase subunit IV JNE32_07910 PF09678 Cytochrome c oxidase caa3 assembly factor (Caa3_CtaG) JNE32_07915 PF08868 YugN-like family JNE32_07920 PF00571 CBS domain JNE32_07925 PF00188 Cysteine-rich secretory protein family JNE32_07925 PF14504 CAP-associated N-terminal JNE32_07930 PF14071 Putative coat protein JNE32_07935 PF14003 YlbE-like protein JNE32_07940 PF06133 Control of competence regulator ComK, YlbF/YmcA JNE32_07945 PF09902 Uncharacterized protein conserved in bacteria (DUF2129) JNE32_07955 PF01467 Cytidylyltransferase-like JNE32_07960 PF07670 Nucleoside recognition JNE32_07965 PF01734 Patatin-like phospholipase JNE32_07970 PF05362 Lon protease (S16) C-terminal proteolytic domain JNE32_07970 PF13180 PDZ domain JNE32_07975 PF05636 HIGH Nucleotidyl Transferase JNE32_07985 PF02620 Large ribosomal RNA subunit accumulation protein YceD JNE32_07990 PF01783 Ribosomal L32p protein family JNE32_08000 PF00583 Acetyltransferase (GNAT) family JNE32_08005 PF08546 Ketopantoate reductase PanE/ApbA C terminal JNE32_08005 PF02558 Ketopantoate reductase PanE/ApbA JNE32_08010 PF10079 Bacillithiol biosynthesis BshC JNE32_08015 PF02381 MraZ protein, putative antitoxin-like JNE32_08020 PF01795 MraW methylase family JNE32_08030 PF00905 Penicillin binding protein transpeptidase domain JNE32_08030 PF03717 Penicillin-binding Protein dimerisation domain JNE32_08030 PF03793 PASTA domain JNE32_08035 PF00905 Penicillin binding protein transpeptidase domain JNE32_08035 PF03717 Penicillin-binding Protein dimerisation domain JNE32_08035 PF03793 PASTA domain JNE32_08040 PF08245 Mur ligase middle domain JNE32_08040 PF02875 Mur ligase family, glutamate ligase domain JNE32_08040 PF01225 Mur ligase family, catalytic domain JNE32_08045 PF00953 Glycosyl transferase family 4 JNE32_08045 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 JNE32_08050 PF08245 Mur ligase middle domain JNE32_08050 PF02875 Mur ligase family, glutamate ligase domain JNE32_08055 PF01098 Cell cycle protein JNE32_08060 PF03033 Glycosyltransferase family 28 N-terminal domain JNE32_08060 PF04101 Glycosyltransferase family 28 C-terminal domain JNE32_08065 PF01565 FAD binding domain JNE32_08065 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain JNE32_08070 PF08478 POTRA domain, FtsQ-type JNE32_08075 PF05949 Bacterial protein of unknown function (DUF881) JNE32_08080 PF05949 Bacterial protein of unknown function (DUF881) JNE32_08085 PF06947 Protein of unknown function (DUF1290) JNE32_08090 PF02491 SHS2 domain inserted in FTSA JNE32_08095 PF00091 Tubulin/FtsZ family, GTPase domain JNE32_08095 PF12327 FtsZ family, C-terminal domain JNE32_08100 PF00082 Subtilase family JNE32_08100 PF05922 Peptidase inhibitor I9 JNE32_08105 PF03419 Sporulation factor SpoIIGA JNE32_08110 PF04545 Sigma-70, region 4 JNE32_08110 PF04542 Sigma-70 region 2 JNE32_08115 PF04539 Sigma-70 region 3 JNE32_08115 PF04542 Sigma-70 region 2 JNE32_08115 PF04545 Sigma-70, region 4 JNE32_08120 PF00005 ABC transporter JNE32_08125 PF07687 Peptidase dimerisation domain JNE32_08125 PF01546 Peptidase family M20/M25/M40 JNE32_08130 PF05239 PRC-barrel domain JNE32_08135 PF02578 Multi-copper polyphenol oxidoreductase laccase JNE32_08140 PF01168 Alanine racemase, N-terminal domain JNE32_08145 PF04472 Cell division protein SepF JNE32_08150 PF02325 YGGT family JNE32_08155 PF17774 Putative RNA-binding domain in YlmH JNE32_08155 PF01479 S4 domain JNE32_08160 PF05103 DivIVA protein JNE32_08165 PF08264 Anticodon-binding domain of tRNA JNE32_08165 PF00133 tRNA synthetases class I (I, L, M and V) JNE32_08170 PF01258 Prokaryotic dksA/traR C4-type zinc finger JNE32_08175 PF01252 Signal peptidase (SPase) II JNE32_08180 PF01479 S4 domain JNE32_08180 PF00849 RNA pseudouridylate synthase JNE32_08185 PF00156 Phosphoribosyl transferase domain JNE32_08190 PF00860 Permease family JNE32_08195 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain JNE32_08195 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain JNE32_08200 PF01979 Amidohydrolase family JNE32_08205 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain JNE32_08205 PF00117 Glutamine amidotransferase class-I JNE32_08210 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain JNE32_08210 PF02142 MGS-like domain JNE32_08210 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain JNE32_08215 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B JNE32_08215 PF00175 Oxidoreductase NAD-binding domain JNE32_08220 PF01180 Dihydroorotate dehydrogenase JNE32_08225 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family JNE32_08230 PF00156 Phosphoribosyl transferase domain JNE32_08235 PF01507 Phosphoadenosine phosphosulfate reductase family JNE32_08240 PF01384 Phosphate transporter family JNE32_08245 PF14306 PUA-like domain JNE32_08245 PF01747 ATP-sulfurylase JNE32_08260 PF01903 CbiX JNE32_08270 PF05670 NFACT protein RNA binding domain JNE32_08275 PF00689 Cation transporting ATPase, C-terminus JNE32_08275 PF00690 Cation transporter/ATPase, N-terminus JNE32_08280 PF03755 YicC-like family, N-terminal region JNE32_08280 PF08340 Domain of unknown function (DUF1732) JNE32_08285 PF04025 Domain of unknown function (DUF370) JNE32_08290 PF00625 Guanylate kinase JNE32_08295 PF01192 RNA polymerase Rpb6 JNE32_08300 PF04127 DNA / pantothenate metabolism flavoprotein JNE32_08300 PF02441 Flavoprotein JNE32_08305 PF18074 Primosomal protein N C-terminal domain JNE32_08305 PF18319 PriA DNA helicase Cys-rich region (CRR) domain JNE32_08305 PF17764 3′ DNA-binding domain (3′BD) JNE32_08305 PF00271 Helicase conserved C-terminal domain JNE32_08305 PF04851 Type III restriction enzyme, res subunit JNE32_08310 PF01327 Polypeptide deformylase JNE32_08315 PF02911 Formyl transferase, C-terminal domain JNE32_08315 PF00551 Formyl transferase JNE32_08320 PF01189 16S rRNA methyltransferase RsmB/F JNE32_08320 PF01029 NusB family JNE32_08325 PF04055 Radical SAM superfamily JNE32_08335 PF03793 PASTA domain JNE32_08335 PF00069 Protein kinase domain JNE32_08340 PF03193 RsgA GTPase JNE32_08340 PF16745 RsgA N-terminal domain JNE32_08345 PF00834 Ribulose-phosphate 3 epimerase family JNE32_08350 PF04263 Thiamin pyrophosphokinase, catalytic domain JNE32_08350 PF04265 Thiamin pyrophosphokinase, vitamin B1 binding domain JNE32_08355 PF08183 Stage V sporulation protein family JNE32_08360 PF00830 Ribosomal L28 family JNE32_08365 PF03780 Asp23 family, cell envelope-related function JNE32_08370 PF02734 DAK2 domain JNE32_08370 PF13684 Dihydroxyacetone kinase family JNE32_08375 PF03315 Serine dehydratase beta chain JNE32_08375 PF01842 ACT domain JNE32_08380 PF03313 Serine dehydratase alpha chain JNE32_08385 PF17191 RecG wedge domain JNE32_08385 PF00270 DEAD/DEAH box helicase JNE32_08385 PF00271 Helicase conserved C-terminal domain JNE32_08390 PF03061 Thioesterase superfamily JNE32_08395 PF02504 Fatty acid synthesis protein JNE32_08400 PF00698 Acyl transferase domain JNE32_08410 PF00550 Phosphopantetheine attachment site JNE32_08415 PF00035 Double-stranded RNA binding motif JNE32_08415 PF14622 Ribonuclease-III-like JNE32_08420 PF02463 RecF/RecN/SMC N terminal domain JNE32_08420 PF06470 SMC proteins Flexible Hinge Domain JNE32_08425 PF02881 SRP54-type protein, helical bundle domain JNE32_08425 PF00448 SRP54-type protein, GTPase domain JNE32_08430 PF02369 Bacterial Ig-like domain (group 1) JNE32_08435 PF04297 Putative helix-turn-helix protein, YlxM / p13 like JNE32_08440 PF02978 Signal peptide binding domain JNE32_08440 PF02881 SRP54-type protein, helical bundle domain JNE32_08440 PF00448 SRP54-type protein, GTPase domain JNE32_08445 PF00886 Ribosomal protein S16 JNE32_08455 PF11068 YlqD protein JNE32_08460 PF01782 RimM N-terminal domain JNE32_08460 PF05239 PRC-barrel domain JNE32_08465 PF01746 tRNA (Guanine-1)-methyltransferase JNE32_08470 PF01245 Ribosomal protein L19 JNE32_08475 PF01926 50S ribosome-binding GTPase JNE32_08480 PF01351 Ribonuclease HII JNE32_08490 PF01312 FlhB HrpN YscU SpaS Family JNE32_08495 PF08442 ATP-grasp domain JNE32_08495 PF00549 CoA-ligase JNE32_08500 PF00549 CoA-ligase JNE32_08500 PF02629 CoA binding domain JNE32_08505 PF02481 DNA recombination-mediator protein A JNE32_08510 PF01396 Topoisomerase DNA binding C4 zinc finger JNE32_08510 PF01131 DNA topoisomerase JNE32_08510 PF01751 Toprim domain JNE32_08515 PF01134 Glucose inhibited division protein A JNE32_08520 PF02899 Phage integrase, N-terminal SAM-like domain JNE32_08520 PF00589 Phage integrase family JNE32_08525 PF00227 Proteasome subunit JNE32_08530 PF00004 ATPase family associated with various cellular activities (AAA) JNE32_08530 PF07724 AAA domain (Cdc48 subfamily) JNE32_08530 PF10431 C-terminal, D2-small domain, of ClpB protein JNE32_08535 PF08222 CodY helix-turn-helix domain JNE32_08535 PF06018 CodY GAF-like domain JNE32_08540 PF00460 Flagella basal body rod protein JNE32_08545 PF00460 Flagella basal body rod protein JNE32_08545 PF06429 Flagellar basal body rod FlgEFG protein C-terminal JNE32_08550 PF02049 Flagellar hook-basal body complex protein FliE JNE32_08555 PF01514 Secretory protein of YscJ/FliF family JNE32_08555 PF08345 Flagellar M-ring protein C-terminal JNE32_08560 PF01706 FliG C-terminal domain JNE32_08560 PF14841 FliG middle domain JNE32_08560 PF14842 FliG N-terminal domain JNE32_08565 PF02108 Flagellar assembly protein FliH JNE32_08570 PF02874 ATP synthase alpha/beta family, beta-barrel domain JNE32_08570 PF18269 T3SS EscN ATPase C-terminal domain JNE32_08570 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain JNE32_08575 PF02050 Flagellar FliJ protein JNE32_08580 PF03448 MgtE intracellular N domain JNE32_08585 PF02120 Flagellar hook-length control protein FliK JNE32_08590 PF03963 Flagellar hook capping protein - N-terminal region JNE32_08595 PF00460 Flagella basal body rod protein JNE32_08595 PF06429 Flagellar basal body rod FlgEFG protein C-terminal JNE32_08600 PF06289 Flagellar and Swarming motility proteins JNE32_08605 PF03748 Flagellar basal body-associated protein FliL JNE32_08610 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term JNE32_08610 PF02154 Flagellar motor switch protein FliM JNE32_08615 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term JNE32_08615 PF04509 CheC-like family JNE32_08620 PF00072 Response regulator receiver domain JNE32_08625 PF04347 Flagellar biosynthesis protein, FliO JNE32_08630 PF00813 FliP family JNE32_08635 PF01313 Bacterial export proteins, family 3 JNE32_08640 PF01311 Bacterial export proteins, family 1 JNE32_08645 PF01312 FlhB HrpN YscU SpaS Family JNE32_08650 PF00771 FHIPEP family JNE32_08655 PF00448 SRP54-type protein, GTPase domain JNE32_08660 PF10609 NUBPL iron-transfer P-loop NTPase JNE32_08665 PF00072 Response regulator receiver domain JNE32_08665 PF01339 CheB methylesterase JNE32_08670 PF01584 CheW-like domain JNE32_08670 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JNE32_08670 PF01627 Hpt domain JNE32_08670 PF07194 P2 response regulator binding domain JNE32_08670 PF02895 Signal transducing histidine kinase, homodimeric domain JNE32_08675 PF01584 CheW-like domain JNE32_08680 PF04509 CheC-like family JNE32_08685 PF03975 CheD chemotactic sensory transduction JNE32_08690 PF04539 Sigma-70 region 3 JNE32_08690 PF04545 Sigma-70, region 4 JNE32_08690 PF04542 Sigma-70 region 2 JNE32_08700 PF00318 Ribosomal protein S2 JNE32_08705 PF00889 Elongation factor TS JNE32_08710 PF00696 Amino acid kinase family JNE32_08715 PF01765 Ribosome recycling factor JNE32_08720 PF01255 Putative undecaprenyl diphosphate synthase JNE32_08730 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase JNE32_08730 PF13288 DXP reductoisomerase C-terminal domain JNE32_08730 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain JNE32_08735 PF02163 Peptidase family M50 JNE32_08735 PF17820 PDZ domain JNE32_08740 PF04073 Aminoacyl-tRNA editing domain JNE32_08740 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) JNE32_08740 PF03129 Anticodon binding domain JNE32_08745 PF14480 DNA polymerase III polC-type N-terminus I JNE32_08745 PF07733 Bacterial DNA polymerase III alpha NTPase domain JNE32_08745 PF11490 DNA polymerase III polC-type N-terminus II JNE32_08745 PF02811 PHP domain JNE32_08745 PF00929 Exonuclease JNE32_08745 PF17657 Bacterial DNA polymerase III alpha subunit finger domain JNE32_08745 PF14579 Helix-hairpin-helix motif JNE32_08750 PF17384 RimP C-terminal SH3 domain JNE32_08750 PF02576 RimP N-terminal domain JNE32_08755 PF00575 S1 RNA binding domain JNE32_08755 PF13184 NusA-like KH domain JNE32_08755 PF08529 NusA N-terminal domain JNE32_08760 PF04296 Protein of unknown function (DUF448) JNE32_08765 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family JNE32_08770 PF00009 Elongation factor Tu GTP binding domain JNE32_08770 PF11987 Translation-initiation factor 2 JNE32_08770 PF04760 Translation initiation factor IF-2, N-terminal region JNE32_08775 PF04456 Protein of unknown function (DUF503) JNE32_08780 PF02033 Ribosome-binding factor A JNE32_08785 PF16198 tRNA pseudouridylate synthase B C-terminal domain JNE32_08785 PF01509 TruB family pseudouridylate synthase (N terminal domain) JNE32_08790 PF01687 Riboflavin kinase JNE32_08790 PF06574 FAD synthetase JNE32_08795 PF00312 Ribosomal protein S15 JNE32_08800 PF01138 3' exoribonuclease family, domain 1 JNE32_08800 PF03725 3' exoribonuclease family, domain 2 JNE32_08800 PF00013 KH domain JNE32_08800 PF00575 S1 RNA binding domain JNE32_08800 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain JNE32_08805 PF01522 Polysaccharide deacetylase JNE32_08810 PF00675 Insulinase (Peptidase family M16) JNE32_08810 PF05193 Peptidase M16 inactive domain JNE32_08815 PF05239 PRC-barrel domain JNE32_08820 PF16924 Dipicolinate synthase subunit A N-terminal domain JNE32_08820 PF01262 Alanine dehydrogenase/PNT, C-terminal domain JNE32_08825 PF02441 Flavoprotein JNE32_08830 PF01118 Semialdehyde dehydrogenase, NAD binding domain JNE32_08830 PF02774 Semialdehyde dehydrogenase, dimerisation domain JNE32_08835 PF00696 Amino acid kinase family JNE32_08835 PF13840 ACT domain JNE32_08840 PF00701 Dihydrodipicolinate synthetase family JNE32_08845 PF00753 Metallo-beta-lactamase superfamily JNE32_08845 PF17770 Ribonuclease J C-terminal domain JNE32_08845 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain JNE32_08850 PF00574 Clp protease JNE32_08855 PF14035 YlzJ-like protein JNE32_08860 PF01580 FtsK/SpoIIIE family JNE32_08860 PF09397 Ftsk gamma domain JNE32_08860 PF17854 FtsK alpha domain JNE32_08865 PF07702 UTRA domain JNE32_08865 PF00392 Bacterial regulatory proteins, gntR family JNE32_08870 PF07690 Major Facilitator Superfamily JNE32_08875 PF05193 Peptidase M16 inactive domain JNE32_08880 PF05193 Peptidase M16 inactive domain JNE32_08880 PF00675 Insulinase (Peptidase family M16) JNE32_08890 PF11588 Protein of unknown function (DUF3243) JNE32_08895 PF11868 Protein of unknown function (DUF3388) JNE32_08900 PF13464 Domain of unknown function (DUF4115) JNE32_08905 PF01066 CDP-alcohol phosphatidyltransferase JNE32_08910 PF02464 Competence-damaged protein JNE32_08910 PF00994 Probable molybdopterin binding domain JNE32_08910 PF18146 Damage-inducible protein CinA KH domain JNE32_08915 PF00154 recA bacterial DNA recombination protein JNE32_08920 PF00144 Beta-lactamase JNE32_08925 PF00013 KH domain JNE32_08925 PF01966 HD domain JNE32_08925 PF12072 Domain of unknown function (DUF3552) JNE32_08930 PF13277 YmdB-like protein JNE32_08935 PF04232 Stage V sporulation protein S (SpoVS) JNE32_08940 PF08240 Alcohol dehydrogenase GroES-like domain JNE32_08940 PF00107 Zinc-binding dehydrogenase JNE32_08945 PF00155 Aminotransferase class I and II JNE32_08950 PF04055 Radical SAM superfamily JNE32_08950 PF01938 TRAM domain JNE32_08950 PF00919 Uncharacterized protein family UPF0004 JNE32_08955 PF06133 Control of competence regulator ComK, YlbF/YmcA JNE32_08960 PF10628 Outer spore coat protein E (CotE) JNE32_08965 PF00488 MutS domain V JNE32_08965 PF01624 MutS domain I JNE32_08965 PF05188 MutS domain II JNE32_08965 PF05192 MutS domain III JNE32_08965 PF05190 MutS family domain IV JNE32_08975 PF14184 Regulatory protein YrvL JNE32_08985 PF13977 BetI-type transcriptional repressor, C-terminal JNE32_08985 PF00440 Bacterial regulatory proteins, tetR family JNE32_08990 PF00753 Metallo-beta-lactamase superfamily JNE32_09000 PF00698 Acyl transferase domain JNE32_09005 PF00698 Acyl transferase domain JNE32_09010 PF00698 Acyl transferase domain JNE32_09010 PF03060 Nitronate monooxygenase JNE32_09015 PF00550 Phosphopantetheine attachment site JNE32_09020 PF02801 Beta-ketoacyl synthase, C-terminal domain JNE32_09020 PF00109 Beta-ketoacyl synthase, N-terminal domain JNE32_09025 PF08540 Hydroxymethylglutaryl-coenzyme A synthase C terminal JNE32_09025 PF01154 Hydroxymethylglutaryl-coenzyme A synthase N terminal JNE32_09030 PF00378 Enoyl-CoA hydratase/isomerase JNE32_09035 PF00378 Enoyl-CoA hydratase/isomerase JNE32_09040 PF00668 Condensation domain JNE32_09040 PF16197 Ketoacyl-synthetase C-terminal extension JNE32_09040 PF00109 Beta-ketoacyl synthase, N-terminal domain JNE32_09040 PF02801 Beta-ketoacyl synthase, C-terminal domain JNE32_09040 PF08659 KR domain JNE32_09040 PF00550 Phosphopantetheine attachment site JNE32_09040 PF14765 Polyketide synthase dehydratase JNE32_09040 PF13193 AMP-binding enzyme C-terminal domain JNE32_09040 PF00501 AMP-binding enzyme JNE32_09045 PF08659 KR domain JNE32_09045 PF02801 Beta-ketoacyl synthase, C-terminal domain JNE32_09045 PF00109 Beta-ketoacyl synthase, N-terminal domain JNE32_09045 PF16197 Ketoacyl-synthetase C-terminal extension JNE32_09045 PF14765 Polyketide synthase dehydratase JNE32_09045 PF00550 Phosphopantetheine attachment site JNE32_09050 PF08659 KR domain JNE32_09050 PF16197 Ketoacyl-synthetase C-terminal extension JNE32_09050 PF00109 Beta-ketoacyl synthase, N-terminal domain JNE32_09050 PF02801 Beta-ketoacyl synthase, C-terminal domain JNE32_09050 PF08242 Methyltransferase domain JNE32_09050 PF00550 Phosphopantetheine attachment site JNE32_09050 PF14765 Polyketide synthase dehydratase JNE32_09055 PF00501 AMP-binding enzyme JNE32_09055 PF02801 Beta-ketoacyl synthase, C-terminal domain JNE32_09055 PF13193 AMP-binding enzyme C-terminal domain JNE32_09055 PF00668 Condensation domain JNE32_09055 PF16197 Ketoacyl-synthetase C-terminal extension JNE32_09055 PF00550 Phosphopantetheine attachment site JNE32_09055 PF14765 Polyketide synthase dehydratase JNE32_09055 PF08659 KR domain JNE32_09055 PF00109 Beta-ketoacyl synthase, N-terminal domain JNE32_09060 PF16197 Ketoacyl-synthetase C-terminal extension JNE32_09060 PF00550 Phosphopantetheine attachment site JNE32_09060 PF02801 Beta-ketoacyl synthase, C-terminal domain JNE32_09060 PF14765 Polyketide synthase dehydratase JNE32_09060 PF00975 Thioesterase domain JNE32_09060 PF08242 Methyltransferase domain JNE32_09060 PF00109 Beta-ketoacyl synthase, N-terminal domain JNE32_09065 PF00067 Cytochrome P450 JNE32_09080 PF00082 Subtilase family JNE32_09090 PF05908 Poly-gamma-glutamate hydrolase JNE32_09095 PF02566 OsmC-like protein JNE32_09100 PF00893 Small Multidrug Resistance protein JNE32_09105 PF00893 Small Multidrug Resistance protein JNE32_09115 PF12788 YmaF family JNE32_09125 PF17209 Hfq protein JNE32_09130 PF14157 YmzC-like protein JNE32_09140 PF07972 NrdI Flavodoxin like JNE32_09145 PF02867 Ribonucleotide reductase, barrel domain JNE32_09145 PF00317 Ribonucleotide reductase, all-alpha domain JNE32_09145 PF08343 Ribonucleotide reductase N-terminal JNE32_09150 PF00268 Ribonucleotide reductase, small chain JNE32_09160 PF05036 Sporulation related domain JNE32_09160 PF01520 N-acetylmuramoyl-L-alanine amidase JNE32_09165 PF00004 ATPase family associated with various cellular activities (AAA) JNE32_09165 PF17866 AAA lid domain JNE32_09170 PF16360 GTP-binding GTPase Middle Region JNE32_09170 PF13167 GTP-binding GTPase N-terminal JNE32_09170 PF01926 50S ribosome-binding GTPase JNE32_09175 PF06838 Methionine gamma-lyase JNE32_09180 PF13411 MerR HTH family regulatory protein JNE32_09185 PF00120 Glutamine synthetase, catalytic domain JNE32_09185 PF03951 Glutamine synthetase, beta-Grasp domain JNE32_09190 PF00589 Phage integrase family JNE32_09190 PF02899 Phage integrase, N-terminal SAM-like domain JNE32_09210 PF03374 Phage antirepressor protein KilAC domain JNE32_09210 PF09669 Phage regulatory protein Rha (Phage_pRha) JNE32_09385 PF01464 Transglycosylase SLT domain JNE32_09395 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase JNE32_09395 PF13457 GW (Gly-Tryp) dipeptide domain JNE32_09430 PF10960 BhlA holin family JNE32_09435 PF04688 SPP1 phage holin JNE32_09440 PF01471 Putative peptidoglycan binding domain JNE32_09440 PF01476 LysM domain JNE32_09440 PF01510 N-acetylmuramoyl-L-alanine amidase JNE32_09445 PF18593 CdiI immunity protein JNE32_09450 PF04740 LXG domain of WXG superfamily JNE32_09450 PF14411 A nuclease of the HNH/ENDO VII superfamily with conserved LHH JNE32_09505 PF15919 HicB_like antitoxin of bacterial toxin-antitoxin system JNE32_09590 PF00535 Glycosyl transferase family 2 JNE32_09595 PF00534 Glycosyl transferases group 1 JNE32_09595 PF00535 Glycosyl transferase family 2 JNE32_09605 PF13302 Acetyltransferase (GNAT) domain JNE32_09620 PF13443 Cro/C1-type HTH DNA-binding domain JNE32_09625 PF13021 Domain of unknown function (DUF3885) JNE32_09655 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain JNE32_09655 PF04616 Glycosyl hydrolases family 43 JNE32_09660 PF00480 ROK family JNE32_09665 PF01261 Xylose isomerase-like TIM barrel JNE32_09670 PF02782 FGGY family of carbohydrate kinases, C-terminal domain JNE32_09670 PF00370 FGGY family of carbohydrate kinases, N-terminal domain JNE32_09675 PF00565 Staphylococcal nuclease homologue JNE32_09680 PF00083 Sugar (and other) transporter JNE32_09685 PF00842 Alanine racemase, C-terminal domain JNE32_09685 PF01168 Alanine racemase, N-terminal domain JNE32_09690 PF10903 Protein of unknown function (DUF2691) JNE32_09695 PF00692 dUTPase JNE32_09715 PF00303 Thymidylate synthase JNE32_09720 PF15493 Domain of unknown function, YrpD JNE32_09725 PF14037 YoqO-like protein JNE32_09735 PF02416 mttA/Hcf106 family JNE32_09745 PF08327 Activator of Hsp90 ATPase homolog 1-like protein JNE32_09770 PF05504 Spore germination B3/ GerAC like, C-terminal JNE32_09780 PF13761 Domain of unknown function (DUF4166) JNE32_09785 PF14158 YndJ-like protein JNE32_09795 PF05908 Poly-gamma-glutamate hydrolase JNE32_09800 PF10710 Protein of unknown function (DUF2512) JNE32_09805 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily JNE32_09810 PF01726 LexA DNA binding domain JNE32_09810 PF00717 Peptidase S24-like JNE32_09815 PF01476 LysM domain JNE32_09820 PF00239 Resolvase, N terminal domain JNE32_09825 PF05979 Bacterial protein of unknown function (DUF896) JNE32_09830 PF00456 Transketolase, thiamine diphosphate binding domain JNE32_09830 PF02779 Transketolase, pyrimidine binding domain JNE32_09830 PF02780 Transketolase, C-terminal domain JNE32_09835 PF10747 Sporulation inhibitor of replication protein SirA JNE32_09840 PF03672 Uncharacterised protein family (UPF0154) JNE32_09845 PF09388 Spo0E like sporulation regulatory protein JNE32_09850 PF02683 Cytochrome C biogenesis protein transmembrane region JNE32_09855 PF00072 Response regulator receiver domain JNE32_09860 PF07301 Protein of unknown function (DUF1453) JNE32_09865 PF11084 Protein of unknown function (DUF2621) JNE32_09875 PF08179 Small acid-soluble spore protein P family JNE32_09885 PF00330 Aconitase family (aconitate hydratase) JNE32_09885 PF00694 Aconitase C-terminal domain JNE32_09890 PF00578 AhpC/TSA family JNE32_09895 PF13040 Fur-regulated basic protein B JNE32_09900 PF08177 Small acid-soluble spore protein N family JNE32_09910 PF03061 Thioesterase superfamily JNE32_09920 PF01521 Iron-sulphur cluster biosynthesis JNE32_09925 PF02660 Glycerol-3-phosphate acyltransferase JNE32_09930 PF13380 CoA binding domain JNE32_09935 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JNE32_09935 PF01751 Toprim domain JNE32_09935 PF00204 DNA gyrase B JNE32_09935 PF00986 DNA gyrase B subunit, carboxyl terminus JNE32_09950 PF01235 Sodium:alanine symporter family JNE32_09955 PF00942 Cellulose binding domain JNE32_09955 PF00150 Cellulase (glycosyl hydrolase family 5) JNE32_09960 PF17452 Uncharacterized YnfE-like JNE32_09965 PF17189 Glycosyl hydrolase family 30 beta sandwich domain JNE32_09970 PF03422 Carbohydrate binding module (family 6) JNE32_09970 PF04616 Glycosyl hydrolases family 43 JNE32_09975 PF04138 GtrA-like protein JNE32_09980 PF00483 Nucleotidyl transferase JNE32_09985 PF09335 SNARE associated Golgi protein JNE32_09995 PF01039 Carboxyl transferase domain JNE32_10000 PF00378 Enoyl-CoA hydratase/isomerase JNE32_10005 PF00682 HMGL-like JNE32_10010 PF00364 Biotin-requiring enzyme JNE32_10015 PF00289 Biotin carboxylase, N-terminal domain JNE32_10015 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain JNE32_10015 PF02785 Biotin carboxylase C-terminal domain JNE32_10020 PF00501 AMP-binding enzyme JNE32_10020 PF13193 AMP-binding enzyme C-terminal domain JNE32_10025 PF00441 Acyl-CoA dehydrogenase, C-terminal domain JNE32_10025 PF02770 Acyl-CoA dehydrogenase, middle domain JNE32_10025 PF02771 Acyl-CoA dehydrogenase, N-terminal domain JNE32_10030 PF17329 Family of unknown function (DUF5367) JNE32_10040 PF02638 Glycosyl hydrolase-like 10 JNE32_10045 PF07098 Protein of unknown function (DUF1360) JNE32_10050 PF13193 AMP-binding enzyme C-terminal domain JNE32_10050 PF00668 Condensation domain JNE32_10050 PF00501 AMP-binding enzyme JNE32_10050 PF00975 Thioesterase domain JNE32_10050 PF00550 Phosphopantetheine attachment site JNE32_10055 PF00501 AMP-binding enzyme JNE32_10055 PF13193 AMP-binding enzyme C-terminal domain JNE32_10055 PF00668 Condensation domain JNE32_10055 PF00550 Phosphopantetheine attachment site JNE32_10060 PF00501 AMP-binding enzyme JNE32_10060 PF13193 AMP-binding enzyme C-terminal domain JNE32_10060 PF00668 Condensation domain JNE32_10060 PF00550 Phosphopantetheine attachment site JNE32_10065 PF13193 AMP-binding enzyme C-terminal domain JNE32_10065 PF00668 Condensation domain JNE32_10065 PF00550 Phosphopantetheine attachment site JNE32_10065 PF00501 AMP-binding enzyme JNE32_10070 PF00501 AMP-binding enzyme JNE32_10070 PF13193 AMP-binding enzyme C-terminal domain JNE32_10070 PF00668 Condensation domain JNE32_10070 PF00550 Phosphopantetheine attachment site JNE32_10075 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family JNE32_10080 PF01263 Aldose 1-epimerase JNE32_10085 PF01554 MatE JNE32_10090 PF16800 IseA DL-endopeptidase inhibitor JNE32_10100 PF00589 Phage integrase family JNE32_10105 PF12728 Helix-turn-helix domain JNE32_10115 PF03466 LysR substrate binding domain JNE32_10115 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JNE32_10120 PF00107 Zinc-binding dehydrogenase JNE32_10120 PF08240 Alcohol dehydrogenase GroES-like domain JNE32_10125 PF07992 Pyridine nucleotide-disulphide oxidoreductase JNE32_10125 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster JNE32_10130 PF01493 GXGXG motif JNE32_10130 PF01645 Conserved region in glutamate synthase JNE32_10130 PF00310 Glutamine amidotransferases class-II JNE32_10130 PF04898 Glutamate synthase central domain JNE32_10135 PF03466 LysR substrate binding domain JNE32_10135 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JNE32_10140 PF00696 Amino acid kinase family JNE32_10140 PF01472 PUA domain JNE32_10145 PF03807 NADP oxidoreductase coenzyme F420-dependent JNE32_10145 PF14748 Pyrroline-5-carboxylate reductase dimerisation JNE32_10150 PF02334 Replication terminator protein JNE32_10155 PF00106 short chain dehydrogenase JNE32_10160 PF06103 Bacterial protein of unknown function (DUF948) JNE32_10170 PF13302 Acetyltransferase (GNAT) domain JNE32_10190 PF07690 Major Facilitator Superfamily JNE32_10195 PF00370 FGGY family of carbohydrate kinases, N-terminal domain JNE32_10195 PF02782 FGGY family of carbohydrate kinases, C-terminal domain JNE32_10200 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain JNE32_10200 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain JNE32_10205 PF01568 Molydopterin dinucleotide binding domain JNE32_10205 PF00384 Molybdopterin oxidoreductase JNE32_10205 PF04879 Molybdopterin oxidoreductase Fe4S4 domain JNE32_10230 PF13217 Protein of unknown function (DUF4025) JNE32_10235 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JNE32_10235 PF05227 CHASE3 domain JNE32_10235 PF00672 HAMP domain JNE32_10240 PF11794 4-hydroxyphenylacetate 3-hydroxylase N terminal JNE32_10240 PF03241 4-hydroxyphenylacetate 3-hydroxylase C terminal JNE32_10245 PF03330 Lytic transglycolase JNE32_10250 PF06912 Protein of unknown function (DUF1275) JNE32_10255 PF00544 Pectate lyase JNE32_10260 PF02586 SOS response associated peptidase (SRAP) JNE32_10270 PF00190 Cupin JNE32_10275 PF16302 Domain of unknown function (DUF4944) JNE32_10280 PF00583 Acetyltransferase (GNAT) family JNE32_10280 PF14268 YoaP-like JNE32_10300 PF04294 VanW like protein JNE32_10305 PF11188 Protein of unknown function (DUF2975) JNE32_10310 PF13443 Cro/C1-type HTH DNA-binding domain JNE32_10315 PF05675 Protein of unknown function (DUF817) JNE32_10320 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JNE32_10320 PF03466 LysR substrate binding domain JNE32_10325 PF00892 EamA-like transporter family JNE32_10335 PF01965 DJ-1/PfpI family JNE32_10345 PF11518 Protein of unknown function (DUF3221) JNE32_10360 PF00391 PEP-utilising enzyme, mobile domain JNE32_10360 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain JNE32_10365 PF00457 Glycosyl hydrolases family 11 JNE32_10370 PF05154 TM2 domain JNE32_10375 PF01381 Helix-turn-helix JNE32_10430 PF17094 Uncharacterised protein family (UPF0715) JNE32_10530 PF04740 LXG domain of WXG superfamily JNE32_10530 PF15652 HNH/Endo VII superfamily toxin with a SHH signature JNE32_10535 PF09346 SMI1 / KNR4 family (SUKH-1) JNE32_10540 PF01593 Flavin containing amine oxidoreductase JNE32_10545 PF00589 Phage integrase family JNE32_10545 PF14659 Phage integrase, N-terminal SAM-like domain JNE32_10585 PF01510 N-acetylmuramoyl-L-alanine amidase JNE32_10590 PF04688 SPP1 phage holin JNE32_10595 PF10960 BhlA holin family JNE32_10630 PF01464 Transglycosylase SLT domain JNE32_10705 PF01464 Transglycosylase SLT domain JNE32_10760 PF09669 Phage regulatory protein Rha (Phage_pRha) JNE32_10760 PF03374 Phage antirepressor protein KilAC domain JNE32_10775 PF01588 Putative tRNA binding domain JNE32_10780 PF12833 Helix-turn-helix domain JNE32_10780 PF07883 Cupin domain JNE32_10785 PF00583 Acetyltransferase (GNAT) family JNE32_10790 PF00440 Bacterial regulatory proteins, tetR family JNE32_10790 PF13305 Tetracyclin repressor-like, C-terminal domain JNE32_10795 PF00753 Metallo-beta-lactamase superfamily JNE32_10800 PF06445 GyrI-like small molecule binding domain JNE32_10805 PF08279 HTH domain JNE32_10805 PF13280 WYL domain JNE32_10815 PF01022 Bacterial regulatory protein, arsR family JNE32_10825 PF04238 Protein of unknown function (DUF420) JNE32_10830 PF18846 Bacterial archaeo-eukaryotic release factor family 5 JNE32_10845 PF00487 Fatty acid desaturase JNE32_10850 PF07730 Histidine kinase JNE32_10855 PF00196 Bacterial regulatory proteins, luxR family JNE32_10855 PF00072 Response regulator receiver domain JNE32_10860 PF06725 3D domain JNE32_10860 PF01476 LysM domain JNE32_10865 PF00570 HRDC domain JNE32_10865 PF00271 Helicase conserved C-terminal domain JNE32_10865 PF09382 RQC domain JNE32_10865 PF00270 DEAD/DEAH box helicase JNE32_10865 PF16124 RecQ zinc-binding JNE32_10875 PF02525 Flavodoxin-like fold JNE32_10880 PF01258 Prokaryotic dksA/traR C4-type zinc finger JNE32_10895 PF00011 Hsp20/alpha crystallin family JNE32_10910 PF08000 Bacterial PH domain JNE32_10920 PF00171 Aldehyde dehydrogenase family JNE32_10930 PF02777 Iron/manganese superoxide dismutases, C-terminal domain JNE32_10930 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain JNE32_10935 PF00209 Sodium:neurotransmitter symporter family JNE32_10940 PF01758 Sodium Bile acid symporter family JNE32_10945 PF02817 e3 binding domain JNE32_10945 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) JNE32_10945 PF00364 Biotin-requiring enzyme JNE32_10950 PF00676 Dehydrogenase E1 component JNE32_10950 PF02779 Transketolase, pyrimidine binding domain JNE32_10950 PF16870 2-oxoglutarate dehydrogenase C-terminal JNE32_10955 PF00092 von Willebrand factor type A domain JNE32_10960 PF07728 AAA domain (dynein-related subfamily) JNE32_10965 PF00080 Copper/zinc superoxide dismutase (SODC) JNE32_10965 PF13627 Prokaryotic lipoprotein-attachment site JNE32_10970 PF01476 LysM domain JNE32_10970 PF00877 NlpC/P60 family JNE32_10975 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase JNE32_10980 PF10372 Bacterial membrane-spanning protein N-terminus JNE32_10980 PF02457 DisA bacterial checkpoint controller nucleotide-binding JNE32_10985 PF01554 MatE JNE32_10990 PF01740 STAS domain JNE32_10995 PF02585 GlcNAc-PI de-N-acetylase JNE32_11000 PF08830 Protein of unknown function (DUF1806) JNE32_11010 PF00892 EamA-like transporter family JNE32_11025 PF02447 GntP family permease JNE32_11030 PF14552 Tautomerase enzyme JNE32_11035 PF01638 HxlR-like helix-turn-helix JNE32_11040 PF00881 Nitroreductase family JNE32_11045 PF01738 Dienelactone hydrolase family JNE32_11050 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily JNE32_11055 PF11755 Protein of unknown function (DUF3311) JNE32_11060 PF00474 Sodium:solute symporter family JNE32_11065 PF17820 PDZ domain JNE32_11065 PF01471 Putative peptidoglycan binding domain JNE32_11065 PF03572 Peptidase family S41 JNE32_11070 PF08241 Methyltransferase domain JNE32_11080 PF02557 D-alanyl-D-alanine carboxypeptidase JNE32_11085 PF01048 Phosphorylase superfamily JNE32_11095 PF14191 YodL-like JNE32_11100 PF01569 PAP2 superfamily JNE32_11105 PF14162 YozD-like protein JNE32_11120 PF06855 YozE SAM-like fold JNE32_11125 PF14122 YokU-like protein, putative antitoxin JNE32_11145 PF13443 Cro/C1-type HTH DNA-binding domain JNE32_11200 PF00269 Small, acid-soluble spore proteins, alpha/beta type JNE32_11215 PF00186 Dihydrofolate reductase JNE32_11220 PF00303 Thymidylate synthase JNE32_11245 PF00692 dUTPase JNE32_11260 PF00085 Thioredoxin JNE32_11270 PF13392 HNH endonuclease JNE32_11285 PF00317 Ribonucleotide reductase, all-alpha domain JNE32_11285 PF14528 LAGLIDADG-like domain JNE32_11285 PF08343 Ribonucleotide reductase N-terminal JNE32_11285 PF02867 Ribonucleotide reductase, barrel domain JNE32_11290 PF07972 NrdI Flavodoxin like JNE32_11320 PF01555 DNA methylase JNE32_11380 PF01555 DNA methylase JNE32_11385 PF01844 HNH endonuclease JNE32_11395 PF02223 Thymidylate kinase JNE32_11405 PF09629 YorP protein JNE32_11420 PF06725 3D domain JNE32_11425 PF07733 Bacterial DNA polymerase III alpha NTPase domain JNE32_11425 PF17657 Bacterial DNA polymerase III alpha subunit finger domain JNE32_11425 PF14579 Helix-hairpin-helix motif JNE32_11425 PF02811 PHP domain JNE32_11430 PF17768 RecJ OB domain JNE32_11430 PF01368 DHH family JNE32_11440 PF03796 DnaB-like helicase C terminal domain JNE32_11485 PF02586 SOS response associated peptidase (SRAP) JNE32_11490 PF01068 ATP dependent DNA ligase domain JNE32_11515 PF14037 YoqO-like protein JNE32_11565 PF03374 Phage antirepressor protein KilAC domain JNE32_11565 PF09669 Phage regulatory protein Rha (Phage_pRha) JNE32_11605 PF09467 Hypothetical protein Yopt JNE32_11610 PF13443 Cro/C1-type HTH DNA-binding domain JNE32_11620 PF14072 DNA-sulfur modification-associated JNE32_11625 PF02899 Phage integrase, N-terminal SAM-like domain JNE32_11625 PF00589 Phage integrase family JNE32_11630 PF01381 Helix-turn-helix JNE32_11715 PF00580 UvrD/REP helicase N-terminal domain JNE32_11715 PF13361 UvrD-like helicase C-terminal domain JNE32_11775 PF00216 Bacterial DNA-binding protein JNE32_11815 PF03237 Terminase-like family JNE32_11915 PF13495 Phage integrase, N-terminal SAM-like domain JNE32_11915 PF00589 Phage integrase family JNE32_11935 PF01551 Peptidase family M23 JNE32_11935 PF01464 Transglycosylase SLT domain JNE32_11935 PF10145 Phage-related minor tail protein JNE32_11940 PF05709 Phage tail protein JNE32_11945 PF06605 Prophage endopeptidase tail JNE32_11960 PF01510 N-acetylmuramoyl-L-alanine amidase JNE32_11975 PF18801 response regulator aspartate phosphatase H, N terminal JNE32_11985 PF00817 impB/mucB/samB family JNE32_11985 PF11799 impB/mucB/samB family C-terminal domain JNE32_11985 PF11798 IMS family HHH motif JNE32_11990 PF08863 YolD-like protein JNE32_12010 PF15652 HNH/Endo VII superfamily toxin with a SHH signature JNE32_12010 PF04740 LXG domain of WXG superfamily JNE32_12025 PF05901 Excalibur calcium-binding domain JNE32_12025 PF00565 Staphylococcal nuclease homologue JNE32_12035 PF00239 Resolvase, N terminal domain JNE32_12035 PF07508 Recombinase JNE32_12040 PF12544 Lysine-2,3-aminomutase JNE32_12045 PF00583 Acetyltransferase (GNAT) family JNE32_12050 PF07687 Peptidase dimerisation domain JNE32_12050 PF01546 Peptidase family M20/M25/M40 JNE32_12055 PF01144 Coenzyme A transferase JNE32_12060 PF01144 Coenzyme A transferase JNE32_12065 PF00202 Aminotransferase class-III JNE32_12080 PF00583 Acetyltransferase (GNAT) family JNE32_12085 PF00535 Glycosyl transferase family 2 JNE32_12100 PF12996 DUF based on E. rectale Gene description (DUF3880) JNE32_12105 PF02333 Phytase JNE32_12110 PF02719 Polysaccharide biosynthesis protein JNE32_12115 PF01641 SelR domain JNE32_12120 PF01625 Peptide methionine sulfoxide reductase JNE32_12125 PF01047 MarR family JNE32_12130 PF01554 MatE JNE32_12135 PF17431 Uncharacterized YmpT-like JNE32_12140 PF09911 Uncharacterized protein conserved in bacteria (DUF2140) JNE32_12145 PF13472 GDSL-like Lipase/Acylhydrolase family JNE32_12150 PF02630 SCO1/SenC JNE32_12155 PF10751 Protein of unknown function (DUF2535) JNE32_12160 PF00291 Pyridoxal-phosphate dependent enzyme JNE32_12160 PF00585 C-terminal regulatory domain of Threonine dehydratase JNE32_12165 PF00158 Sigma-54 interaction domain JNE32_12165 PF08461 Ribonuclease R winged-helix domain JNE32_12170 PF03006 Haemolysin-III related JNE32_12180 PF00186 Dihydrofolate reductase JNE32_12185 PF00303 Thymidylate synthase JNE32_12190 PF04608 Phosphatidylglycerophosphatase A JNE32_12195 PF14005 YpjP-like protein JNE32_12200 PF04445 Putative SAM-dependent methyltransferase JNE32_12205 PF06491 Disulphide isomerase JNE32_12210 PF00920 Dehydratase family JNE32_12215 PF13769 Virulence factor JNE32_12215 PF08712 Scaffold protein Nfu/NifU N terminal JNE32_12220 PF01966 HD domain JNE32_12225 PF00255 Glutathione peroxidase JNE32_12230 PF04204 Homoserine O-succinyltransferase JNE32_12235 PF00534 Glycosyl transferases group 1 JNE32_12235 PF06925 Monogalactosyldiacylglycerol (MGDG) synthase JNE32_12245 PF00313 'Cold-shock' DNA-binding domain JNE32_12255 PF10819 Protein of unknown function (DUF2564) JNE32_12260 PF10782 Zinc-finger JNE32_12265 PF13456 Reverse transcriptase-like JNE32_12270 PF02592 Putative vitamin uptake transporter JNE32_12275 PF13456 Reverse transcriptase-like JNE32_12285 PF01367 5'-3' exonuclease, C-terminal SAM fold JNE32_12285 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain JNE32_12295 PF10752 Protein of unknown function (DUF2533) JNE32_12300 PF00350 Dynamin family JNE32_12310 PF04140 Isoprenylcysteine carboxyl methyltransferase (ICMT) family JNE32_12315 PF02797 Chalcone and stilbene synthases, C-terminal domain JNE32_12315 PF00195 Chalcone and stilbene synthases, N-terminal domain JNE32_12320 PF00860 Permease family JNE32_12325 PF00156 Phosphoribosyl transferase domain JNE32_12330 PF02074 Carboxypeptidase Taq (M32) metallopeptidase JNE32_12335 PF03812 2-keto-3-deoxygluconate permease JNE32_12340 PF01081 KDPG and KHG aldolase JNE32_12345 PF00294 pfkB family carbohydrate kinase JNE32_12350 PF00356 Bacterial regulatory proteins, lacI family JNE32_12355 PF04962 KduI/IolB family JNE32_12365 PF13307 Helicase C-terminal domain JNE32_12375 PF14139 YpzG-like protein JNE32_12380 PF01170 Putative RNA methylase family UPF0020 JNE32_12380 PF02926 THUMP domain JNE32_12390 PF05103 DivIVA protein JNE32_12395 PF06908 YspA SLOG family JNE32_12400 PF11122 Inner spore coat protein D JNE32_12410 PF13482 RNase_H superfamily JNE32_12415 PF00271 Helicase conserved C-terminal domain JNE32_12415 PF09369 Domain of unknown function (DUF1998) JNE32_12415 PF00270 DEAD/DEAH box helicase JNE32_12420 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 JNE32_12430 PF14179 YppG-like protein JNE32_12435 PF14178 YppF-like protein JNE32_12440 PF08807 Bacterial domain of unknown function (DUF1798) JNE32_12445 PF17522 Family of unknown function (DUF5446) JNE32_12455 PF10720 Protein of unknown function (DUF2515) JNE32_12460 PF03838 Recombination protein U JNE32_12465 PF00905 Penicillin binding protein transpeptidase domain JNE32_12465 PF00912 Transglycosylase JNE32_12475 PF00730 HhH-GPD superfamily base excision DNA repair protein JNE32_12475 PF00633 Helix-hairpin-helix motif JNE32_12475 PF10576 Iron-sulfur binding domain of endonuclease III JNE32_12480 PF07261 Replication initiation and membrane attachment JNE32_12485 PF01336 OB-fold nucleic acid binding domain JNE32_12485 PF00152 tRNA synthetases class II (D, K and N) JNE32_12490 PF00155 Aminotransferase class I and II JNE32_12495 PF17881 Domain of unknown function (DUF5590) JNE32_12495 PF03413 Peptidase propeptide and YPEB domain JNE32_12500 PF14084 Protein of unknown function (DUF4264) JNE32_12505 PF13307 Helicase C-terminal domain JNE32_12505 PF04851 Type III restriction enzyme, res subunit JNE32_12505 PF00929 Exonuclease JNE32_12510 PF02261 Aspartate decarboxylase JNE32_12515 PF02569 Pantoate-beta-alanine ligase JNE32_12520 PF02548 Ketopantoate hydroxymethyltransferase JNE32_12525 PF02237 Biotin protein ligase C terminal domain JNE32_12525 PF03099 Biotin/lipoate A/B protein ligase family JNE32_12525 PF08279 HTH domain JNE32_12530 PF01743 Poly A polymerase head domain JNE32_12530 PF12627 Probable RNA and SrmB- binding site of polymerase A JNE32_12530 PF13735 tRNA nucleotidyltransferase domain 2 putative JNE32_12535 PF00534 Glycosyl transferases group 1 JNE32_12535 PF13439 Glycosyltransferase Family 4 JNE32_12540 PF02585 GlcNAc-PI de-N-acetylase JNE32_12545 PF02142 MGS-like domain JNE32_12550 PF01113 Dihydrodipicolinate reductase, N-terminus JNE32_12550 PF05173 Dihydrodipicolinate reductase, C-terminus JNE32_12555 PF03819 MazG nucleotide pyrophosphohydrolase domain JNE32_12560 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) JNE32_12560 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 JNE32_12565 PF09577 Sporulation protein YpjB (SpoYpjB) JNE32_12570 PF07187 Protein of unknown function (DUF1405) JNE32_12575 PF00032 Cytochrome b(C-terminal)/b6/petD JNE32_12575 PF13442 Cytochrome C oxidase, cbb3-type, subunit III JNE32_12580 PF00033 Cytochrome b/b6/petB JNE32_12590 PF10673 Protein of unknown function (DUF2487) JNE32_12595 PF08858 IDEAL domain JNE32_12595 PF08864 UPF0302 domain JNE32_12605 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) JNE32_12610 PF01842 ACT domain JNE32_12610 PF02153 Prephenate dehydrogenase JNE32_12615 PF00155 Aminotransferase class I and II JNE32_12620 PF00290 Tryptophan synthase alpha chain JNE32_12625 PF00291 Pyridoxal-phosphate dependent enzyme JNE32_12630 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase JNE32_12635 PF00218 Indole-3-glycerol phosphate synthase JNE32_12640 PF00591 Glycosyl transferase family, a/b domain JNE32_12640 PF02885 Glycosyl transferase family, helical bundle domain JNE32_12645 PF00425 chorismate binding enzyme JNE32_12645 PF04715 Anthranilate synthase component I, N terminal region JNE32_12650 PF07736 Chorismate mutase type I JNE32_12655 PF01761 3-dehydroquinate synthase JNE32_12660 PF01264 Chorismate synthase JNE32_12665 PF03705 CheR methyltransferase, all-alpha domain JNE32_12665 PF01739 CheR methyltransferase, SAM binding domain JNE32_12670 PF00334 Nucleoside diphosphate kinase JNE32_12675 PF00348 Polyprenyl synthetase JNE32_12680 PF01209 ubiE/COQ5 methyltransferase family JNE32_12685 PF07307 Heptaprenyl diphosphate synthase (HEPPP synthase) subunit 1 JNE32_12690 PF02081 Tryptophan RNA-binding attenuator protein JNE32_12695 PF01227 GTP cyclohydrolase I JNE32_12700 PF00216 Bacterial DNA-binding protein JNE32_12705 PF09547 Stage IV sporulation protein A (spore_IV_A) JNE32_12715 PF10966 Protein of unknown function (DUF2768) JNE32_12720 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus JNE32_12720 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus JNE32_12725 PF01926 50S ribosome-binding GTPase JNE32_12725 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal JNE32_12735 PF14045 YIEGIA protein JNE32_12745 PF14140 YpzI-like protein JNE32_12750 PF01070 FMN-dependent dehydrogenase JNE32_12755 PF00575 S1 RNA binding domain JNE32_12760 PF02224 Cytidylate kinase JNE32_12765 PF17313 Family of unknown function (DUF5359) JNE32_12770 PF12945 Flagellar protein YcgR JNE32_12770 PF07238 PilZ domain JNE32_12775 PF14620 YpeB sporulation JNE32_12775 PF03413 Peptidase propeptide and YPEB domain JNE32_12780 PF01471 Putative peptidoglycan binding domain JNE32_12780 PF07486 Cell Wall Hydrolase JNE32_12785 PF13367 PrsW family intramembrane metalloprotease JNE32_12795 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase JNE32_12795 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain JNE32_12800 PF05389 Negative regulator of genetic competence (MecA) JNE32_12805 PF00149 Calcineurin-like phosphoesterase JNE32_12810 PF10864 Protein of unknown function (DUF2663) JNE32_12815 PF01476 LysM domain JNE32_12820 PF02517 CPBP intramembrane metalloprotease JNE32_12825 PF00271 Helicase conserved C-terminal domain JNE32_12825 PF00270 DEAD/DEAH box helicase JNE32_12830 PF14493 Helix-turn-helix domain JNE32_12840 PF12822 ECF transporter, substrate-specific component JNE32_12845 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain JNE32_12845 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain JNE32_12845 PF01842 ACT domain JNE32_12850 PF01487 Type I 3-dehydroquinase JNE32_12860 PF04542 Sigma-70 region 2 JNE32_12860 PF08281 Sigma-70, region 4 JNE32_12865 PF00989 PAS fold JNE32_12865 PF00512 His Kinase A (phospho-acceptor) domain JNE32_12865 PF18698 Histidine kinase sensor domain JNE32_12865 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JNE32_12865 PF00672 HAMP domain JNE32_12870 PF00486 Transcriptional regulatory protein, C terminal JNE32_12870 PF00072 Response regulator receiver domain JNE32_12875 PF01578 Cytochrome C assembly protein JNE32_12880 PF05140 ResB-like family JNE32_12885 PF00578 AhpC/TSA family JNE32_12890 PF00849 RNA pseudouridylate synthase JNE32_12890 PF01479 S4 domain JNE32_12895 PF07670 Nucleoside recognition JNE32_12900 PF07670 Nucleoside recognition JNE32_12905 PF00768 D-alanyl-D-alanine carboxypeptidase JNE32_12905 PF07943 Penicillin-binding protein 5, C-terminal domain JNE32_12910 PF13047 Protein of unknown function (DUF3907) JNE32_12915 PF04079 Segregation and condensation complex subunit ScpB JNE32_12920 PF02616 Segregation and condensation protein ScpA JNE32_12925 PF03745 Domain of unknown function (DUF309) JNE32_12930 PF00583 Acetyltransferase (GNAT) family JNE32_12935 PF00885 6,7-dimethyl-8-ribityllumazine synthase JNE32_12940 PF00925 GTP cyclohydrolase II JNE32_12940 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase JNE32_12945 PF00677 Lumazine binding domain JNE32_12950 PF01872 RibD C-terminal domain JNE32_12950 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region JNE32_12960 PF10502 Signal peptidase, peptidase S26 JNE32_12970 PF09855 Nucleic-acid-binding protein containing Zn-ribbon domain (DUF2082) JNE32_12985 PF10676 Spore germination protein gerPA/gerPF JNE32_12990 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD JNE32_12995 PF06207 Protein of unknown function (DUF1002) JNE32_13000 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain JNE32_13000 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain JNE32_13005 PF03323 Bacillus/Clostridium GerA spore germination protein JNE32_13010 PF14097 Stage V sporulation protein AE1 JNE32_13015 PF03862 SpoVAC/SpoVAEB sporulation membrane protein JNE32_13020 PF07451 Stage V sporulation protein AD (SpoVAD) JNE32_13025 PF03862 SpoVAC/SpoVAEB sporulation membrane protein JNE32_13030 PF13782 Stage V sporulation protein AB JNE32_13035 PF12164 Stage V sporulation protein AA JNE32_13040 PF04545 Sigma-70, region 4 JNE32_13040 PF04539 Sigma-70 region 3 JNE32_13040 PF04542 Sigma-70 region 2 JNE32_13045 PF13581 Histidine kinase-like ATPase domain JNE32_13050 PF01740 STAS domain JNE32_13055 PF00768 D-alanyl-D-alanine carboxypeptidase JNE32_13055 PF07943 Penicillin-binding protein 5, C-terminal domain JNE32_13060 PF01048 Phosphorylase superfamily JNE32_13065 PF01676 Metalloenzyme superfamily JNE32_13070 PF00589 Phage integrase family JNE32_13070 PF02899 Phage integrase, N-terminal SAM-like domain JNE32_13075 PF14004 Protein of unknown function (DUF4227) JNE32_13080 PF01475 Ferric uptake regulator family JNE32_13085 PF01944 Stage II sporulation protein M JNE32_13095 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain JNE32_13095 PF00390 Malic enzyme, N-terminal domain JNE32_13095 PF03949 Malic enzyme, NAD binding domain JNE32_13100 PF03553 Na+/H+ antiporter family JNE32_13105 PF10415 Fumarase C C-terminus JNE32_13105 PF00206 Lyase JNE32_13110 PF00710 Asparaginase, N-terminal JNE32_13110 PF17763 Glutaminase/Asparaginase C-terminal domain JNE32_13115 PF01381 Helix-turn-helix JNE32_13125 PF00293 NUDIX domain JNE32_13130 PF13072 Mother cell inhibitor of FtsZ JNE32_13135 PF00248 Aldo/keto reductase family JNE32_13140 PF13025 Protein of unknown function (DUF3886) JNE32_13145 PF12146 Serine aminopeptidase, S33 JNE32_13150 PF10827 Protein of unknown function (DUF2552) JNE32_13155 PF01521 Iron-sulphur cluster biosynthesis JNE32_13160 PF04229 GrpB protein JNE32_13160 PF13673 Acetyltransferase (GNAT) domain JNE32_13165 PF03992 Antibiotic biosynthesis monooxygenase JNE32_13170 PF00583 Acetyltransferase (GNAT) family JNE32_13175 PF08863 YolD-like protein JNE32_13180 PF11799 impB/mucB/samB family C-terminal domain JNE32_13180 PF00817 impB/mucB/samB family JNE32_13185 PF14164 YqzH-like protein JNE32_13190 PF07690 Major Facilitator Superfamily JNE32_13205 PF00485 Phosphoribulokinase / Uridine kinase family JNE32_13210 PF00291 Pyridoxal-phosphate dependent enzyme JNE32_13215 PF00106 short chain dehydrogenase JNE32_13220 PF00753 Metallo-beta-lactamase superfamily JNE32_13225 PF03807 NADP oxidoreductase coenzyme F420-dependent JNE32_13225 PF14748 Pyrroline-5-carboxylate reductase dimerisation JNE32_13230 PF01546 Peptidase family M20/M25/M40 JNE32_13235 PF00724 NADH:flavin oxidoreductase / NADH oxidase family JNE32_13240 PF12146 Serine aminopeptidase, S33 JNE32_13245 PF00471 Ribosomal protein L33 JNE32_13250 PF12706 Beta-lactamase superfamily domain JNE32_13255 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain JNE32_13255 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain JNE32_13260 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase JNE32_13260 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain JNE32_13265 PF11798 IMS family HHH motif JNE32_13265 PF11799 impB/mucB/samB family C-terminal domain JNE32_13265 PF00817 impB/mucB/samB family JNE32_13275 PF02096 60Kd inner membrane protein JNE32_13280 PF09844 Uncharacterized conserved protein (COG2071) JNE32_13285 PF01546 Peptidase family M20/M25/M40 JNE32_13285 PF07687 Peptidase dimerisation domain JNE32_13290 PF01039 Carboxyl transferase domain JNE32_13305 PF03734 L,D-transpeptidase catalytic domain JNE32_13310 PF11728 Putative aromatic acid exporter C-terminal domain JNE32_13310 PF06081 Aromatic acid exporter family member 1 JNE32_13315 PF00005 ABC transporter JNE32_13320 PF00528 Binding-protein-dependent transport system inner membrane component JNE32_13325 PF00497 Bacterial extracellular solute-binding proteins, family 3 JNE32_13330 PF06491 Disulphide isomerase JNE32_13335 PF00781 Diacylglycerol kinase catalytic domain JNE32_13340 PF07690 Major Facilitator Superfamily JNE32_13345 PF13411 MerR HTH family regulatory protein JNE32_13345 PF06445 GyrI-like small molecule binding domain JNE32_13350 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) JNE32_13350 PF02817 e3 binding domain JNE32_13350 PF00364 Biotin-requiring enzyme JNE32_13355 PF02780 Transketolase, C-terminal domain JNE32_13355 PF02779 Transketolase, pyrimidine binding domain JNE32_13360 PF00676 Dehydrogenase E1 component JNE32_13365 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain JNE32_13365 PF07992 Pyridine nucleotide-disulphide oxidoreductase JNE32_13370 PF00871 Acetokinase family JNE32_13375 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain JNE32_13375 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase JNE32_13380 PF01515 Phosphate acetyl/butaryl transferase JNE32_13385 PF00158 Sigma-54 interaction domain JNE32_13385 PF00989 PAS fold JNE32_13385 PF02954 Bacterial regulatory protein, Fis family JNE32_13390 PF11118 Protein of unknown function (DUF2627) JNE32_13400 PF03972 MmgE/PrpD family JNE32_13405 PF00285 Citrate synthase, C-terminal domain JNE32_13410 PF00441 Acyl-CoA dehydrogenase, C-terminal domain JNE32_13410 PF02771 Acyl-CoA dehydrogenase, N-terminal domain JNE32_13410 PF02770 Acyl-CoA dehydrogenase, middle domain JNE32_13415 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain JNE32_13415 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain JNE32_13420 PF02803 Thiolase, C-terminal domain JNE32_13420 PF00108 Thiolase, N-terminal domain JNE32_13425 PF03009 Glycerophosphoryl diester phosphodiesterase family JNE32_13430 PF01520 N-acetylmuramoyl-L-alanine amidase JNE32_13445 PF00724 NADH:flavin oxidoreductase / NADH oxidase family JNE32_13450 PF00072 Response regulator receiver domain JNE32_13450 PF08769 Sporulation initiation factor Spo0A C terminal JNE32_13455 PF17820 PDZ domain JNE32_13455 PF05580 SpoIVB peptidase S55 JNE32_13460 PF13476 AAA domain JNE32_13465 PF01316 Arginine repressor, DNA binding domain JNE32_13465 PF02863 Arginine repressor, C-terminal domain JNE32_13470 PF01479 S4 domain JNE32_13470 PF01728 FtsJ-like methyltransferase JNE32_13475 PF02780 Transketolase, C-terminal domain JNE32_13475 PF02779 Transketolase, pyrimidine binding domain JNE32_13475 PF13292 1-deoxy-D-xylulose-5-phosphate synthase JNE32_13480 PF00348 Polyprenyl synthetase JNE32_13485 PF02609 Exonuclease VII small subunit JNE32_13490 PF02601 Exonuclease VII, large subunit JNE32_13490 PF13742 OB-fold nucleic acid binding domain JNE32_13495 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain JNE32_13495 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain JNE32_13500 PF01029 NusB family JNE32_13505 PF03780 Asp23 family, cell envelope-related function JNE32_13510 PF00289 Biotin carboxylase, N-terminal domain JNE32_13510 PF02785 Biotin carboxylase C-terminal domain JNE32_13510 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain JNE32_13515 PF00364 Biotin-requiring enzyme JNE32_13520 PF12685 SpoIIIAH-like protein JNE32_13530 PF09581 Stage III sporulation protein AF (Spore_III_AF) JNE32_13535 PF09546 Stage III sporulation protein AE (spore_III_AE) JNE32_13540 PF06686 Stage III sporulation protein AC/AD protein family JNE32_13545 PF06686 Stage III sporulation protein AC/AD protein family JNE32_13550 PF09548 Stage III sporulation protein AB (spore_III_AB) JNE32_13560 PF10942 Protein of unknown function (DUF2619) JNE32_13565 PF09285 Elongation factor P, C-terminal JNE32_13565 PF08207 Elongation factor P (EF-P) KOW-like domain JNE32_13565 PF01132 Elongation factor P (EF-P) OB domain JNE32_13570 PF01321 Creatinase/Prolidase N-terminal domain JNE32_13570 PF00557 Metallopeptidase family M24 JNE32_13575 PF01220 Dehydroquinase class II JNE32_13580 PF11085 Conserved membrane protein YqhR JNE32_13585 PF07136 Protein of unknown function (DUF1385) JNE32_13595 PF01734 Patatin-like phospholipase JNE32_13600 PF01325 Iron dependent repressor, N-terminal DNA binding domain JNE32_13600 PF02742 Iron dependent repressor, metal binding and dimerisation domain JNE32_13605 PF03099 Biotin/lipoate A/B protein ligase family JNE32_13610 PF00581 Rhodanese-like domain JNE32_13615 PF02347 Glycine cleavage system P-protein JNE32_13620 PF02347 Glycine cleavage system P-protein JNE32_13625 PF08669 Glycine cleavage T-protein C-terminal barrel domain JNE32_13625 PF01571 Aminomethyltransferase folate-binding domain JNE32_13630 PF00176 SNF2 family N-terminal domain JNE32_13630 PF00271 Helicase conserved C-terminal domain JNE32_13635 PF11079 Bacterial protein YqhG of unknown function JNE32_13640 PF08671 Anti-repressor SinI JNE32_13645 PF01381 Helix-turn-helix JNE32_13645 PF08671 Anti-repressor SinI JNE32_13650 PF12389 Camelysin metallo-endopeptidase JNE32_13665 PF13028 Protein of unknown function (DUF3889) JNE32_13670 PF14038 YqzE-like protein JNE32_13675 PF14173 ComG operon protein 7 JNE32_13680 PF15980 Putative Competence protein ComGF JNE32_13690 PF07963 Prokaryotic N-terminal methylation motif JNE32_13695 PF07963 Prokaryotic N-terminal methylation motif JNE32_13700 PF00482 Type II secretion system (T2SS), protein F JNE32_13710 PF00571 CBS domain JNE32_13715 PF01544 CorA-like Mg2+ transporter protein JNE32_13720 PF00571 CBS domain JNE32_13720 PF03471 Transporter associated domain JNE32_13720 PF01595 Cyclin M transmembrane N-terminal domain JNE32_13725 PF14361 RsbT co-antagonist protein rsbRD N-terminal domain JNE32_13725 PF01740 STAS domain JNE32_13735 PF03960 ArsC family JNE32_13740 PF11117 Protein of unknown function (DUF2626) JNE32_13745 PF00753 Metallo-beta-lactamase superfamily JNE32_13750 PF10958 Protein of unknown function (DUF2759) JNE32_13755 PF01910 Thiamine-binding protein JNE32_13765 PF00246 Zinc carboxypeptidase JNE32_13770 PF00884 Sulfatase JNE32_13775 PF00480 ROK family JNE32_13780 PF06014 Bacterial protein of unknown function (DUF910) JNE32_13785 PF01694 Rhomboid family JNE32_13795 PF01812 5-formyltetrahydrofolate cyclo-ligase family JNE32_13800 PF00471 Ribosomal protein L33 JNE32_13805 PF00534 Glycosyl transferases group 1 JNE32_13805 PF13439 Glycosyltransferase Family 4 JNE32_13825 PF00005 ABC transporter JNE32_13830 PF00005 ABC transporter JNE32_13835 PF00528 Binding-protein-dependent transport system inner membrane component JNE32_13840 PF00528 Binding-protein-dependent transport system inner membrane component JNE32_13845 PF12849 PBP superfamily domain JNE32_13850 PF03717 Penicillin-binding Protein dimerisation domain JNE32_13850 PF00905 Penicillin binding protein transpeptidase domain JNE32_13855 PF07690 Major Facilitator Superfamily JNE32_13860 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain JNE32_13860 PF02777 Iron/manganese superoxide dismutases, C-terminal domain JNE32_13865 PF04306 Protein of unknown function (DUF456) JNE32_13870 PF06691 Protein of unknown function (DUF1189) JNE32_13880 PF04551 GcpE protein JNE32_13895 PF01475 Ferric uptake regulator family JNE32_13900 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) JNE32_13900 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 JNE32_13905 PF11116 Protein of unknown function (DUF2624) JNE32_13910 PF01261 Xylose isomerase-like TIM barrel JNE32_13915 PF00271 Helicase conserved C-terminal domain JNE32_13915 PF00270 DEAD/DEAH box helicase JNE32_13920 PF14181 YqfQ-like protein JNE32_13925 PF02401 LytB protein JNE32_13930 PF01784 NIF3 (NGG1p interacting factor 3) JNE32_13935 PF04816 tRNA (adenine(22)-N(1))-methyltransferase JNE32_13940 PF13442 Cytochrome C oxidase, cbb3-type, subunit III JNE32_13945 PF03979 Sigma-70 factor, region 1.1 JNE32_13945 PF00140 Sigma-70 factor, region 1.2 JNE32_13945 PF04542 Sigma-70 region 2 JNE32_13945 PF04539 Sigma-70 region 3 JNE32_13945 PF04545 Sigma-70, region 4 JNE32_13950 PF10410 DnaB-helicase binding domain of primase JNE32_13950 PF08275 DNA primase catalytic core, N-terminal domain JNE32_13950 PF01807 CHC2 zinc finger JNE32_13955 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 JNE32_13960 PF03618 Kinase/pyrophosphorylase JNE32_13965 PF08279 HTH domain JNE32_13965 PF00571 CBS domain JNE32_13970 PF02092 Glycyl-tRNA synthetase beta subunit JNE32_13975 PF02091 Glycyl-tRNA synthetase alpha subunit JNE32_13980 PF11967 Recombination protein O N terminal JNE32_13980 PF02565 Recombination protein O C terminal JNE32_13985 PF14006 YqzL-like protein JNE32_13990 PF01926 50S ribosome-binding GTPase JNE32_13990 PF07650 KH domain JNE32_13995 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region JNE32_14000 PF01219 Prokaryotic diacylglycerol kinase JNE32_14005 PF02130 Uncharacterized protein family UPF0054 JNE32_14010 PF01966 HD domain JNE32_14010 PF07698 7TM receptor with intracellular HD hydrolase JNE32_14010 PF07697 7TM-HD extracellular JNE32_14015 PF02562 PhoH-like protein JNE32_14020 PF06898 Putative stage IV sporulation protein YqfD JNE32_14025 PF07873 YabP family JNE32_14035 PF12127 SigmaW regulon antibacterial JNE32_14040 PF01972 Serine dehydrogenase proteinase JNE32_14040 PF01957 NfeD-like C-terminal, partner-binding JNE32_14045 PF09424 Yqey-like protein JNE32_14050 PF01165 Ribosomal protein S21 JNE32_14055 PF02690 Na+/Pi-cotransporter JNE32_14060 PF04055 Radical SAM superfamily JNE32_14060 PF00919 Uncharacterized protein family UPF0004 JNE32_14060 PF01938 TRAM domain JNE32_14065 PF04452 RNA methyltransferase JNE32_14075 PF00684 DnaJ central domain JNE32_14075 PF00226 DnaJ domain JNE32_14075 PF01556 DnaJ C terminal domain JNE32_14080 PF00012 Hsp70 protein JNE32_14085 PF01025 GrpE JNE32_14090 PF01628 HrcA protein C terminal domain JNE32_14095 PF04055 Radical SAM superfamily JNE32_14095 PF06969 HemN C-terminal domain JNE32_14100 PF06421 GTP-binding protein LepA C-terminus JNE32_14100 PF03144 Elongation factor Tu domain 2 JNE32_14100 PF00009 Elongation factor Tu GTP binding domain JNE32_14100 PF00679 Elongation factor G C-terminus JNE32_14105 PF12438 Protein of unknown function (DUF3679) JNE32_14110 PF07454 Stage II sporulation protein P (SpoIIP) JNE32_14115 PF03418 Germination protease JNE32_14120 PF01649 Ribosomal protein S20 JNE32_14125 PF06144 DNA polymerase III, delta subunit JNE32_14135 PF14141 YqzM-like protein JNE32_14140 PF00753 Metallo-beta-lactamase superfamily JNE32_14140 PF13567 Domain of unknown function (DUF4131) JNE32_14140 PF03772 Competence protein JNE32_14145 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region JNE32_14150 PF10531 SLBB domain JNE32_14155 PF14748 Pyrroline-5-carboxylate reductase dimerisation JNE32_14155 PF03807 NADP oxidoreductase coenzyme F420-dependent JNE32_14160 PF13649 Methyltransferase domain JNE32_14170 PF01966 HD domain JNE32_14175 PF01467 Cytidylyltransferase-like JNE32_14180 PF01985 CRS1 / YhbY (CRM) domain JNE32_14185 PF08501 Shikimate dehydrogenase substrate binding domain JNE32_14185 PF01488 Shikimate / quinate 5-dehydrogenase JNE32_14185 PF18317 Shikimate 5'-dehydrogenase C-terminal domain JNE32_14190 PF01926 50S ribosome-binding GTPase JNE32_14200 PF08970 Sporulation inhibitor A JNE32_14205 PF00657 GDSL-like Lipase/Acylhydrolase JNE32_14210 PF01471 Putative peptidoglycan binding domain JNE32_14210 PF01510 N-acetylmuramoyl-L-alanine amidase JNE32_14230 PF14040 Deoxyribonuclease NucA/NucB JNE32_14240 PF13408 Recombinase zinc beta ribbon domain JNE32_14240 PF00239 Resolvase, N terminal domain JNE32_14240 PF07508 Recombinase JNE32_14245 PF01451 Low molecular weight phosphotyrosine protein phosphatase JNE32_14250 PF01758 Sodium Bile acid symporter family JNE32_14255 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily JNE32_14260 PF01022 Bacterial regulatory protein, arsR family JNE32_14265 PF08892 YqcI/YcgG family JNE32_14285 PF00107 Zinc-binding dehydrogenase JNE32_14285 PF08240 Alcohol dehydrogenase GroES-like domain JNE32_14310 PF13181 Tetratricopeptide repeat JNE32_14310 PF18801 response regulator aspartate phosphatase H, N terminal JNE32_14325 PF14449 Pre-toxin TG JNE32_14325 PF04740 LXG domain of WXG superfamily JNE32_14325 PF14410 HNH/ENDO VII superfamily nuclease with conserved GHE residues JNE32_14330 PF05076 Suppressor of fused protein (SUFU) JNE32_14350 PF01471 Putative peptidoglycan binding domain JNE32_14350 PF01510 N-acetylmuramoyl-L-alanine amidase JNE32_14355 PF05105 Bacteriophage holin family JNE32_14365 PF09693 Phage uncharacterised protein (Phage_XkdX) JNE32_14370 PF09636 XkdW protein JNE32_14385 PF10076 Uncharacterised protein conserved in bacteria (DUF2313) JNE32_14390 PF04865 Baseplate J-like protein JNE32_14395 PF10934 Protein of unknown function (DUF2634) JNE32_14400 PF10844 Protein of unknown function (DUF2577) JNE32_14410 PF01476 LysM domain JNE32_14415 PF01464 Transglycosylase SLT domain JNE32_14425 PF08890 Phage XkdN-like tail assembly chaperone protein, TAC JNE32_14430 PF09393 Phage tail tube protein JNE32_14435 PF17481 Phage tail sheath protein beta-sandwich domain JNE32_14435 PF04984 Phage tail sheath protein subtilisin-like domain JNE32_14435 PF17482 Phage tail sheath C-terminal domain JNE32_14450 PF04883 Bacteriophage HK97-gp10, putative tail-component JNE32_14455 PF12206 Domain of unknown function (DUF3599) JNE32_14460 PF11436 Protein of unknown function (DUF3199) JNE32_14465 PF14553 YqbF, hypothetical protein domain JNE32_14470 PF05065 Phage capsid family JNE32_14475 PF14550 Putative phage serine protease XkdF JNE32_14485 PF04233 Phage Mu protein F like protein JNE32_14490 PF04860 Phage portal protein JNE32_14495 PF17288 Terminase RNAseH like domain JNE32_14495 PF04466 Phage terminase large subunit JNE32_14500 PF10668 Phage terminase small subunit JNE32_14530 PF17356 Phage-like element PBSX protein XtrA JNE32_14535 PF05866 Endodeoxyribonuclease RusA JNE32_14545 PF01695 IstB-like ATP binding protein JNE32_14550 PF07261 Replication initiation and membrane attachment JNE32_14555 PF03837 RecT family JNE32_14560 PF09588 YqaJ-like viral recombinase domain JNE32_14565 PF09466 Hypothetical protein Yqai JNE32_14575 PF17448 Uncharacterized YqaH-like JNE32_14580 PF01381 Helix-turn-helix JNE32_14595 PF01381 Helix-turn-helix JNE32_14610 PF06114 IrrE N-terminal-like domain JNE32_14620 PF00512 His Kinase A (phospho-acceptor) domain JNE32_14625 PF00072 Response regulator receiver domain JNE32_14625 PF00486 Transcriptional regulatory protein, C terminal JNE32_14630 PF04235 Protein of unknown function (DUF418) JNE32_14640 PF00583 Acetyltransferase (GNAT) family JNE32_14645 PF02525 Flavodoxin-like fold JNE32_14650 PF13787 Protein of unknown function with HXXEE motif JNE32_14655 PF01925 Sulfite exporter TauE/SafE JNE32_14660 PF01206 Sulfurtransferase TusA JNE32_14665 PF00581 Rhodanese-like domain JNE32_14665 PF00753 Metallo-beta-lactamase superfamily JNE32_14675 PF01206 Sulfurtransferase TusA JNE32_14675 PF00581 Rhodanese-like domain JNE32_14685 PF02583 Metal-sensitive transcriptional repressor JNE32_14695 PF07883 Cupin domain JNE32_14705 PF13411 MerR HTH family regulatory protein JNE32_14705 PF06445 GyrI-like small molecule binding domain JNE32_14710 PF07690 Major Facilitator Superfamily JNE32_14715 PF00583 Acetyltransferase (GNAT) family JNE32_14720 PF01595 Cyclin M transmembrane N-terminal domain JNE32_14720 PF03471 Transporter associated domain JNE32_14720 PF00571 CBS domain JNE32_14725 PF14142 YrzO-like protein JNE32_14730 PF00892 EamA-like transporter family JNE32_14735 PF03466 LysR substrate binding domain JNE32_14735 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JNE32_14745 PF16916 Dimerisation domain of Zinc Transporter JNE32_14745 PF01545 Cation efflux family JNE32_14750 PF14552 Tautomerase enzyme JNE32_14755 PF03466 LysR substrate binding domain JNE32_14755 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JNE32_14770 PF05525 Branched-chain amino acid transport protein JNE32_14775 PF05437 Branched-chain amino acid transport protein (AzlD) JNE32_14780 PF03591 AzlC protein JNE32_14785 PF01037 Lrp/AsnC ligand binding domain JNE32_14795 PF00067 Cytochrome P450 JNE32_14805 PF00857 Isochorismatase family JNE32_14810 PF10823 Protein of unknown function (DUF2568) JNE32_14820 PF05163 DinB family JNE32_14825 PF04439 Streptomycin adenylyltransferase JNE32_14830 PF03060 Nitronate monooxygenase JNE32_14840 PF15493 Domain of unknown function, YrpD JNE32_14845 PF00392 Bacterial regulatory proteins, gntR family JNE32_14845 PF07729 FCD domain JNE32_14855 PF07690 Major Facilitator Superfamily JNE32_14865 PF02780 Transketolase, C-terminal domain JNE32_14865 PF02779 Transketolase, pyrimidine binding domain JNE32_14865 PF13292 1-deoxy-D-xylulose-5-phosphate synthase JNE32_14870 PF00456 Transketolase, thiamine diphosphate binding domain JNE32_14880 PF06445 GyrI-like small molecule binding domain JNE32_14880 PF13411 MerR HTH family regulatory protein JNE32_14885 PF04237 YjbR JNE32_14895 PF09223 ZinT (YodA) periplasmic lipocalin-like zinc-recruitment JNE32_14900 PF08281 Sigma-70, region 4 JNE32_14900 PF04542 Sigma-70 region 2 JNE32_14905 PF00248 Aldo/keto reductase family JNE32_14910 PF03600 Citrate transporter JNE32_14915 PF03466 LysR substrate binding domain JNE32_14915 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JNE32_14920 PF04303 PrpF protein JNE32_14925 PF01374 Glycosyl hydrolase family 46 JNE32_14935 PF00561 alpha/beta hydrolase fold JNE32_14955 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily JNE32_14965 PF07875 Coat F domain JNE32_14970 PF00107 Zinc-binding dehydrogenase JNE32_14970 PF13823 Alcohol dehydrogenase GroES-associated JNE32_14970 PF08240 Alcohol dehydrogenase GroES-like domain JNE32_14980 PF07875 Coat F domain JNE32_14985 PF13411 MerR HTH family regulatory protein JNE32_14995 PF00107 Zinc-binding dehydrogenase JNE32_14995 PF08240 Alcohol dehydrogenase GroES-like domain JNE32_15000 PF01965 DJ-1/PfpI family JNE32_15005 PF00251 Glycosyl hydrolases family 32 N-terminal domain JNE32_15005 PF08244 Glycosyl hydrolases family 32 C terminal JNE32_15010 PF03613 PTS system mannose/fructose/sorbose family IID component JNE32_15015 PF03609 PTS system sorbose-specific iic component JNE32_15020 PF03830 PTS system sorbose subfamily IIB component JNE32_15025 PF03610 PTS system fructose IIA component JNE32_15030 PF00158 Sigma-54 interaction domain JNE32_15030 PF00874 PRD domain JNE32_15030 PF03610 PTS system fructose IIA component JNE32_15040 PF00324 Amino acid permease JNE32_15045 PF01810 LysE type translocator JNE32_15050 PF01978 Sugar-specific transcriptional regulator TrmB JNE32_15050 PF11495 Archaeal transcriptional regulator TrmB JNE32_15055 PF08281 Sigma-70, region 4 JNE32_15055 PF04542 Sigma-70 region 2 JNE32_15060 PF13739 Deacetylase PdaC JNE32_15060 PF11738 Protein of unknown function (DUF3298) JNE32_15070 PF14145 YrhK-like protein JNE32_15075 PF00667 FAD binding domain JNE32_15075 PF00258 Flavodoxin JNE32_15075 PF00175 Oxidoreductase NAD-binding domain JNE32_15075 PF00067 Cytochrome P450 JNE32_15080 PF00440 Bacterial regulatory proteins, tetR family JNE32_15080 PF16295 Tetracyclin repressor-like, C-terminal domain JNE32_15085 PF08241 Methyltransferase domain JNE32_15095 PF09501 Probable sporulation protein (Bac_small_yrzI) JNE32_15100 PF01226 Formate/nitrite transporter JNE32_15105 PF10057 Uncharacterized conserved protein (DUF2294) JNE32_15110 PF04879 Molybdopterin oxidoreductase Fe4S4 domain JNE32_15110 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region JNE32_15110 PF01568 Molydopterin dinucleotide binding domain JNE32_15110 PF00384 Molybdopterin oxidoreductase JNE32_15110 PF00037 4Fe-4S binding domain JNE32_15115 PF07849 Protein of unknown function (DUF1641) JNE32_15120 PF14143 YrhC-like protein JNE32_15125 PF01053 Cys/Met metabolism PLP-dependent enzyme JNE32_15130 PF00291 Pyridoxal-phosphate dependent enzyme JNE32_15135 PF01048 Phosphorylase superfamily JNE32_15140 PF13649 Methyltransferase domain JNE32_15145 PF10750 Protein of unknown function (DUF2536) JNE32_15150 PF07423 Domain of unknown function (DUF1510) JNE32_15155 PF00905 Penicillin binding protein transpeptidase domain JNE32_15155 PF03717 Penicillin-binding Protein dimerisation domain JNE32_15160 PF03449 Transcription elongation factor, N-terminal JNE32_15160 PF01272 Transcription elongation factor, GreA/GreB, C-term JNE32_15165 PF00485 Phosphoribulokinase / Uridine kinase family JNE32_15170 PF01136 Peptidase family U32 JNE32_15170 PF16325 Peptidase family U32 C-terminal domain JNE32_15175 PF01136 Peptidase family U32 JNE32_15180 PF01596 O-methyltransferase JNE32_15185 PF02618 YceG-like family JNE32_15190 PF06949 Protein of unknown function (DUF1292) JNE32_15195 PF03652 Holliday junction resolvase JNE32_15200 PF06135 IreB regulatory phosphoprotein JNE32_15205 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain JNE32_15205 PF01411 tRNA synthetases class II (A) JNE32_15205 PF02272 DHHA1 domain JNE32_15210 PF01594 AI-2E family transporter JNE32_15215 PF00005 ABC transporter JNE32_15220 PF00497 Bacterial extracellular solute-binding proteins, family 3 JNE32_15225 PF00528 Binding-protein-dependent transport system inner membrane component JNE32_15230 PF00528 Binding-protein-dependent transport system inner membrane component JNE32_15235 PF13056 Protein of unknown function (DUF3918) JNE32_15245 PF05239 PRC-barrel domain JNE32_15250 PF14490 Helix-hairpin-helix containing domain JNE32_15250 PF13538 UvrD-like helicase C-terminal domain JNE32_15250 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain JNE32_15255 PF07719 Tetratricopeptide repeat JNE32_15255 PF13181 Tetratricopeptide repeat JNE32_15265 PF00266 Aminotransferase class-V JNE32_15270 PF02082 Transcriptional regulator JNE32_15275 PF12002 MgsA AAA+ ATPase C terminal JNE32_15275 PF05496 Holliday junction DNA helicase RuvB P-loop domain JNE32_15275 PF16193 AAA C-terminal domain JNE32_15280 PF00899 ThiF family JNE32_15290 PF00152 tRNA synthetases class II (D, K and N) JNE32_15290 PF02938 GAD domain JNE32_15290 PF01336 OB-fold nucleic acid binding domain JNE32_15295 PF13393 Histidyl-tRNA synthetase JNE32_15295 PF03129 Anticodon binding domain JNE32_15300 PF17449 Uncharacterized YrzK-like JNE32_15305 PF08239 Bacterial SH3 domain JNE32_15305 PF01520 N-acetylmuramoyl-L-alanine amidase JNE32_15310 PF02580 D-Tyr-tRNA(Tyr) deacylase JNE32_15315 PF02824 TGS domain JNE32_15315 PF04607 Region found in RelA / SpoT proteins JNE32_15315 PF13291 ACT domain JNE32_15320 PF00156 Phosphoribosyl transferase domain JNE32_15325 PF02272 DHHA1 domain JNE32_15325 PF17768 RecJ OB domain JNE32_15325 PF10141 Single-strand DNA-specific exonuclease, C terminal domain JNE32_15325 PF01368 DHH family JNE32_15330 PF06305 Lipopolysaccharide assembly protein A domain JNE32_15335 PF02080 TrkA-C domain JNE32_15340 PF07549 SecD/SecF GG Motif JNE32_15340 PF02355 Protein export membrane protein JNE32_15345 PF13797 Post-transcriptional regulator JNE32_15350 PF01943 Polysaccharide biosynthesis protein JNE32_15350 PF14667 Polysaccharide biosynthesis C-terminal domain JNE32_15355 PF04239 Protein of unknown function (DUF421) JNE32_15360 PF12670 Protein of unknown function (DUF3792) JNE32_15365 PF02699 Preprotein translocase subunit JNE32_15370 PF01702 Queuine tRNA-ribosyltransferase JNE32_15375 PF02547 Queuosine biosynthesis protein JNE32_15380 PF11146 Protein of unknown function (DUF2905) JNE32_15385 PF05496 Holliday junction DNA helicase RuvB P-loop domain JNE32_15385 PF05491 RuvB C-terminal winged helix domain JNE32_15385 PF17864 RuvB AAA lid domain JNE32_15390 PF01330 RuvA N terminal domain JNE32_15390 PF07499 RuvA, C-terminal domain JNE32_15395 PF08955 BofC C-terminal domain JNE32_15395 PF08977 Bypass of Forespore C, N terminal JNE32_15400 PF07690 Major Facilitator Superfamily JNE32_15405 PF01408 Oxidoreductase family, NAD-binding Rossmann fold JNE32_15405 PF02894 Oxidoreductase family, C-terminal alpha/beta domain JNE32_15430 PF01235 Sodium:alanine symporter family JNE32_15435 PF01709 Transcriptional regulator JNE32_15440 PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) JNE32_15445 PF01476 LysM domain JNE32_15450 PF02445 Quinolinate synthetase A protein JNE32_15455 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain JNE32_15455 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain JNE32_15460 PF00890 FAD binding domain JNE32_15460 PF02910 Fumarate reductase flavoprotein C-term JNE32_15465 PF00266 Aminotransferase class-V JNE32_15470 PF08279 HTH domain JNE32_15470 PF02829 3H domain JNE32_15475 PF01842 ACT domain JNE32_15475 PF00800 Prephenate dehydratase JNE32_15480 PF01842 ACT domain JNE32_15485 PF01926 50S ribosome-binding GTPase JNE32_15485 PF01018 GTP1/OBG JNE32_15485 PF09269 Domain of unknown function (DUF1967) JNE32_15490 PF14682 Sporulation initiation phospho-transferase B, C-terminal JNE32_15490 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain JNE32_15500 PF01016 Ribosomal L27 protein JNE32_15505 PF04327 Cysteine protease Prp JNE32_15510 PF00829 Ribosomal prokaryotic L21 protein JNE32_15515 PF02163 Peptidase family M50 JNE32_15520 PF01551 Peptidase family M23 JNE32_15525 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain JNE32_15530 PF03775 Septum formation inhibitor MinC, C-terminal domain JNE32_15535 PF04093 rod shape-determining protein MreD JNE32_15540 PF04085 rod shape-determining protein MreC JNE32_15550 PF04002 RadC-like JAB domain JNE32_15550 PF00633 Helix-hairpin-helix motif JNE32_15555 PF02545 Maf-like protein JNE32_15560 PF05036 Sporulation related domain JNE32_15565 PF01478 Type IV leader peptidase family JNE32_15565 PF06750 Bacterial Peptidase A24 N-terminal domain JNE32_15570 PF02875 Mur ligase family, glutamate ligase domain JNE32_15570 PF08245 Mur ligase middle domain JNE32_15575 PF10458 Valyl tRNA synthetase tRNA binding arm JNE32_15575 PF00133 tRNA synthetases class I (I, L, M and V) JNE32_15575 PF08264 Anticodon-binding domain of tRNA JNE32_15590 PF01476 LysM domain JNE32_15595 PF00202 Aminotransferase class-III JNE32_15600 PF00490 Delta-aminolevulinic acid dehydratase JNE32_15605 PF02602 Uroporphyrinogen-III synthase HemD JNE32_15610 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain JNE32_15610 PF03900 Porphobilinogen deaminase, C-terminal domain JNE32_15615 PF01578 Cytochrome C assembly protein JNE32_15620 PF01488 Shikimate / quinate 5-dehydrogenase JNE32_15620 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain JNE32_15620 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain JNE32_15630 PF01926 50S ribosome-binding GTPase JNE32_15635 PF02190 ATP-dependent protease La (LON) substrate-binding domain JNE32_15635 PF05362 Lon protease (S16) C-terminal proteolytic domain JNE32_15635 PF00004 ATPase family associated with various cellular activities (AAA) JNE32_15640 PF05362 Lon protease (S16) C-terminal proteolytic domain JNE32_15640 PF00004 ATPase family associated with various cellular activities (AAA) JNE32_15645 PF07724 AAA domain (Cdc48 subfamily) JNE32_15645 PF06689 ClpX C4-type zinc finger JNE32_15645 PF10431 C-terminal, D2-small domain, of ClpB protein JNE32_15650 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase JNE32_15650 PF05697 Bacterial trigger factor protein (TF) JNE32_15650 PF05698 Bacterial trigger factor protein (TF) C-terminus JNE32_15660 PF00694 Aconitase C-terminal domain JNE32_15665 PF00330 Aconitase family (aconitate hydratase) JNE32_15670 PF00180 Isocitrate/isopropylmalate dehydrogenase JNE32_15675 PF00682 HMGL-like JNE32_15675 PF08502 LeuA allosteric (dimerisation) domain JNE32_15680 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain JNE32_15680 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain JNE32_15685 PF10369 Small subunit of acetolactate synthase JNE32_15685 PF01842 ACT domain JNE32_15690 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain JNE32_15690 PF00205 Thiamine pyrophosphate enzyme, central domain JNE32_15690 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain JNE32_15700 PF00583 Acetyltransferase (GNAT) family JNE32_15705 PF09557 Domain of unknown function (DUF2382) JNE32_15705 PF11181 Heat induced stress protein YflT JNE32_15715 PF12850 Calcineurin-like phosphoesterase superfamily domain JNE32_15720 PF01725 Ham1 family JNE32_15725 PF01138 3' exoribonuclease family, domain 1 JNE32_15725 PF03725 3' exoribonuclease family, domain 2 JNE32_15730 PF10646 Sporulation and spore germination JNE32_15735 PF01177 Asp/Glu/Hydantoin racemase JNE32_15740 PF01047 MarR family JNE32_15745 PF00196 Bacterial regulatory proteins, luxR family JNE32_15750 PF03061 Thioesterase superfamily JNE32_15755 PF13085 2Fe-2S iron-sulfur cluster binding domain JNE32_15755 PF13183 4Fe-4S dicluster domain JNE32_15760 PF02910 Fumarate reductase flavoprotein C-term JNE32_15760 PF00890 FAD binding domain JNE32_15765 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit JNE32_15770 PF10702 Protein of unknown function (DUF2507) JNE32_15775 PF13840 ACT domain JNE32_15775 PF01842 ACT domain JNE32_15775 PF00696 Amino acid kinase family JNE32_15780 PF02151 UvrB/uvrC motif JNE32_15780 PF08459 UvrC Helix-hairpin-helix N-terminal JNE32_15780 PF01541 GIY-YIG catalytic domain JNE32_15785 PF00085 Thioredoxin JNE32_15790 PF06964 Alpha-L-arabinofuranosidase C-terminal domain JNE32_15795 PF00766 Electron transfer flavoprotein FAD-binding domain JNE32_15795 PF01012 Electron transfer flavoprotein domain JNE32_15800 PF01012 Electron transfer flavoprotein domain JNE32_15805 PF00378 Enoyl-CoA hydratase/isomerase JNE32_15810 PF08359 YsiA-like protein, C-terminal region JNE32_15810 PF00440 Bacterial regulatory proteins, tetR family JNE32_15815 PF13193 AMP-binding enzyme C-terminal domain JNE32_15815 PF00501 AMP-binding enzyme JNE32_15820 PF03994 Domain of Unknown Function (DUF350) JNE32_15825 PF00488 MutS domain V JNE32_15825 PF01713 Smr domain JNE32_15830 PF02811 PHP domain JNE32_15830 PF14716 Helix-hairpin-helix domain JNE32_15830 PF14791 DNA polymerase beta thumb JNE32_15835 PF02674 Colicin V production protein JNE32_15840 PF05164 Cell division protein ZapA JNE32_15845 PF01351 Ribonuclease HII JNE32_15845 PF11858 Domain of unknown function (DUF3378) JNE32_15850 PF03484 tRNA synthetase B5 domain JNE32_15850 PF03483 B3/4 domain JNE32_15850 PF01588 Putative tRNA binding domain JNE32_15850 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain JNE32_15850 PF03147 Ferredoxin-fold anticodon binding domain JNE32_15855 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain JNE32_15855 PF01409 tRNA synthetases class II core domain (F) JNE32_15865 PF08032 RNA 2'-O ribose methyltransferase substrate binding JNE32_15865 PF00588 SpoU rRNA Methylase family JNE32_15870 PF14098 Small, acid-soluble spore protein I JNE32_15875 PF05651 Putative sugar diacid recognition JNE32_15875 PF17853 GGDEF-like domain JNE32_15875 PF13556 PucR C-terminal helix-turn-helix domain JNE32_15880 PF01565 FAD binding domain JNE32_15880 PF02913 FAD linked oxidases, C-terminal domain JNE32_15885 PF13183 4Fe-4S dicluster domain JNE32_15885 PF02754 Cysteine-rich domain JNE32_15890 PF12681 Glyoxalase-like domain JNE32_15895 PF13722 5TM C-terminal transporter carbon starvation CstA JNE32_15895 PF02554 Carbon starvation protein CstA JNE32_15900 PF06964 Alpha-L-arabinofuranosidase C-terminal domain JNE32_15905 PF00528 Binding-protein-dependent transport system inner membrane component JNE32_15910 PF00528 Binding-protein-dependent transport system inner membrane component JNE32_15915 PF01547 Bacterial extracellular solute-binding protein JNE32_15920 PF13685 Iron-containing alcohol dehydrogenase JNE32_15925 PF13344 Haloacid dehalogenase-like hydrolase JNE32_15930 PF00596 Class II Aldolase and Adducin N-terminal domain JNE32_15935 PF00370 FGGY family of carbohydrate kinases, N-terminal domain JNE32_15935 PF02782 FGGY family of carbohydrate kinases, C-terminal domain JNE32_15940 PF11762 L-arabinose isomerase C-terminal domain JNE32_15940 PF02610 L-arabinose isomerase JNE32_15945 PF04616 Glycosyl hydrolases family 43 JNE32_15950 PF05343 M42 glutamyl aminopeptidase JNE32_15960 PF06961 Protein of unknown function (DUF1294) JNE32_15965 PF00453 Ribosomal protein L20 JNE32_15970 PF01632 Ribosomal protein L35 JNE32_15975 PF00707 Translation initiation factor IF-3, C-terminal domain JNE32_15975 PF05198 Translation initiation factor IF-3, N-terminal domain JNE32_15985 PF04172 LrgB-like family JNE32_15990 PF03788 LrgA family JNE32_15995 PF00072 Response regulator receiver domain JNE32_15995 PF04397 LytTr DNA-binding domain JNE32_16000 PF06580 Histidine kinase JNE32_16000 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JNE32_16000 PF07694 5TMR of 5TMR-LYT JNE32_16005 PF13419 Haloacid dehalogenase-like hydrolase JNE32_16010 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain JNE32_16010 PF02824 TGS domain JNE32_16010 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) JNE32_16010 PF03129 Anticodon binding domain JNE32_16015 PF08812 YtxC-like family JNE32_16020 PF09335 SNARE associated Golgi protein JNE32_16025 PF01695 IstB-like ATP binding protein JNE32_16025 PF07319 Primosomal protein DnaI N-terminus JNE32_16030 PF07261 Replication initiation and membrane attachment JNE32_16035 PF03477 ATP cone domain JNE32_16040 PF02675 S-adenosylmethionine decarboxylase JNE32_16045 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain JNE32_16045 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain JNE32_16050 PF01638 HxlR-like helix-turn-helix JNE32_16055 PF07690 Major Facilitator Superfamily JNE32_16060 PF00248 Aldo/keto reductase family JNE32_16065 PF01121 Dephospho-CoA kinase JNE32_16070 PF02659 Putative manganese efflux pump JNE32_16075 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain JNE32_16075 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain JNE32_16075 PF06827 Zinc finger found in FPG and IleRS JNE32_16080 PF01367 5'-3' exonuclease, C-terminal SAM fold JNE32_16080 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain JNE32_16080 PF00476 DNA polymerase family A JNE32_16085 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JNE32_16085 PF00512 His Kinase A (phospho-acceptor) domain JNE32_16085 PF00989 PAS fold JNE32_16085 PF16736 Single Cache-like JNE32_16090 PF00486 Transcriptional regulatory protein, C terminal JNE32_16090 PF00072 Response regulator receiver domain JNE32_16095 PF00056 lactate/malate dehydrogenase, NAD binding domain JNE32_16095 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain JNE32_16100 PF00180 Isocitrate/isopropylmalate dehydrogenase JNE32_16105 PF00285 Citrate synthase, C-terminal domain JNE32_16110 PF04284 Protein of unknown function (DUF441) JNE32_16115 PF01594 AI-2E family transporter JNE32_16120 PF04186 FxsA cytoplasmic membrane protein JNE32_16125 PF02887 Pyruvate kinase, alpha/beta domain JNE32_16125 PF00391 PEP-utilising enzyme, mobile domain JNE32_16125 PF00224 Pyruvate kinase, barrel domain JNE32_16130 PF00365 Phosphofructokinase JNE32_16135 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit JNE32_16140 PF17848 Acetyl-coA carboxylase zinc finger domain JNE32_16140 PF01039 Carboxyl transferase domain JNE32_16145 PF03949 Malic enzyme, NAD binding domain JNE32_16145 PF00390 Malic enzyme, N-terminal domain JNE32_16150 PF01336 OB-fold nucleic acid binding domain JNE32_16150 PF02811 PHP domain JNE32_16150 PF14579 Helix-hairpin-helix motif JNE32_16150 PF17657 Bacterial DNA polymerase III alpha subunit finger domain JNE32_16150 PF07733 Bacterial DNA polymerase III alpha NTPase domain JNE32_16155 PF14034 Sporulation protein YtrH JNE32_16170 PF01368 DHH family JNE32_16170 PF02272 DHHA1 domain JNE32_16175 PF14007 YtpI-like protein JNE32_16180 PF00392 Bacterial regulatory proteins, gntR family JNE32_16180 PF07085 DRTGG domain JNE32_16180 PF00571 CBS domain JNE32_16180 PF03061 Thioesterase superfamily JNE32_16185 PF01925 Sulfite exporter TauE/SafE JNE32_16190 PF01546 Peptidase family M20/M25/M40 JNE32_16190 PF07687 Peptidase dimerisation domain JNE32_16195 PF01687 Riboflavin kinase JNE32_16200 PF00296 Luciferase-like monooxygenase JNE32_16205 PF00462 Glutaredoxin JNE32_16210 PF00296 Luciferase-like monooxygenase JNE32_16215 PF00005 ABC transporter JNE32_16220 PF00528 Binding-protein-dependent transport system inner membrane component JNE32_16225 PF00528 Binding-protein-dependent transport system inner membrane component JNE32_16230 PF00497 Bacterial extracellular solute-binding proteins, family 3 JNE32_16235 PF00497 Bacterial extracellular solute-binding proteins, family 3 JNE32_16240 PF00583 Acetyltransferase (GNAT) family JNE32_16245 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JNE32_16245 PF03466 LysR substrate binding domain JNE32_16260 PF14698 Argininosuccinate lyase C-terminal JNE32_16260 PF00206 Lyase JNE32_16265 PF00764 Arginosuccinate synthase JNE32_16270 PF00994 Probable molybdopterin binding domain JNE32_16275 PF00871 Acetokinase family JNE32_16285 PF02384 N-6 DNA Methylase JNE32_16290 PF08534 Redoxin JNE32_16295 PF09579 Sporulation protein YtfJ (Spore_YtfJ) JNE32_16300 PF11167 Protein of unknown function (DUF2953) JNE32_16305 PF06271 RDD family JNE32_16310 PF01343 Peptidase family S49 JNE32_16315 PF01513 ATP-NAD kinase JNE32_16320 PF07969 Amidohydrolase family JNE32_16325 PF00501 AMP-binding enzyme JNE32_16325 PF13193 AMP-binding enzyme C-terminal domain JNE32_16330 PF00269 Small, acid-soluble spore proteins, alpha/beta type JNE32_16335 PF02568 Thiamine biosynthesis protein (ThiI) JNE32_16335 PF02926 THUMP domain JNE32_16340 PF00266 Aminotransferase class-V JNE32_16345 PF05525 Branched-chain amino acid transport protein JNE32_16350 PF06160 Septation ring formation regulator, EzrA JNE32_16355 PF02811 PHP domain JNE32_16360 PF00440 Bacterial regulatory proteins, tetR family JNE32_16365 PF13185 GAF domain JNE32_16370 PF00990 Diguanylate cyclase, GGDEF domain JNE32_16375 PF00163 Ribosomal protein S4/S9 N-terminal domain JNE32_16375 PF01479 S4 domain JNE32_16380 PF01479 S4 domain JNE32_16380 PF00579 tRNA synthetases class I (W and Y) JNE32_16385 PF00501 AMP-binding enzyme JNE32_16385 PF13193 AMP-binding enzyme C-terminal domain JNE32_16390 PF00583 Acetyltransferase (GNAT) family JNE32_16395 PF00571 CBS domain JNE32_16400 PF00850 Histone deacetylase domain JNE32_16405 PF13677 Membrane MotB of proton-channel complex MotA/MotB JNE32_16405 PF00691 OmpA family JNE32_16410 PF01618 MotA/TolQ/ExbB proton channel family JNE32_16415 PF00356 Bacterial regulatory proteins, lacI family JNE32_16420 PF00793 DAHP synthetase I family JNE32_16420 PF01817 Chorismate mutase type II JNE32_16425 PF11009 Protein of unknown function (DUF2847) JNE32_16430 PF12732 YtxH-like protein JNE32_16435 PF06103 Bacterial protein of unknown function (DUF948) JNE32_16440 PF02875 Mur ligase family, glutamate ligase domain JNE32_16440 PF01225 Mur ligase family, catalytic domain JNE32_16440 PF08245 Mur ligase middle domain JNE32_16445 PF17854 FtsK alpha domain JNE32_16445 PF09397 Ftsk gamma domain JNE32_16445 PF01580 FtsK/SpoIIIE family JNE32_16450 PF01588 Putative tRNA binding domain JNE32_16450 PF14794 Domain of unknown function (DUF4479) JNE32_16455 PF07285 Protein of unknown function (DUF1444) JNE32_16460 PF00085 Thioredoxin JNE32_16470 PF11071 Nucleoside 2-deoxyribosyltransferase YtoQ JNE32_16475 PF05343 M42 glutamyl aminopeptidase JNE32_16480 PF03413 Peptidase propeptide and YPEB domain JNE32_16485 PF03949 Malic enzyme, NAD binding domain JNE32_16485 PF00390 Malic enzyme, N-terminal domain JNE32_16490 PF00753 Metallo-beta-lactamase superfamily JNE32_16495 PF02390 Putative methyltransferase JNE32_16500 PF14165 YtzH-like protein JNE32_16505 PF01636 Phosphotransferase enzyme family JNE32_16510 PF17999 Pullulanase N1-terminal domain JNE32_16510 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) JNE32_16510 PF00128 Alpha amylase, catalytic domain JNE32_16515 PF00781 Diacylglycerol kinase catalytic domain JNE32_16530 PF00291 Pyridoxal-phosphate dependent enzyme JNE32_16535 PF01546 Peptidase family M20/M25/M40 JNE32_16540 PF00860 Permease family JNE32_16545 PF05975 Bacterial ABC transporter protein EcsB JNE32_16550 PF00005 ABC transporter JNE32_16555 PF08220 DeoR-like helix-turn-helix domain JNE32_16560 PF01479 S4 domain JNE32_16560 PF00849 RNA pseudouridylate synthase JNE32_16565 PF14667 Polysaccharide biosynthesis C-terminal domain JNE32_16565 PF01943 Polysaccharide biosynthesis protein JNE32_16575 PF02028 BCCT, betaine/carnitine/choline family transporter JNE32_16580 PF10957 Sporulation protein Cse60 JNE32_16585 PF04854 Protein of unknown function, DUF624 JNE32_16590 PF02894 Oxidoreductase family, C-terminal alpha/beta domain JNE32_16590 PF01408 Oxidoreductase family, NAD-binding Rossmann fold JNE32_16600 PF07470 Glycosyl Hydrolase Family 88 JNE32_16605 PF00528 Binding-protein-dependent transport system inner membrane component JNE32_16610 PF17853 GGDEF-like domain JNE32_16610 PF12833 Helix-turn-helix domain JNE32_16615 PF13416 Bacterial extracellular solute-binding protein JNE32_16620 PF00528 Binding-protein-dependent transport system inner membrane component JNE32_16625 PF01370 NAD dependent epimerase/dehydratase family JNE32_16630 PF00067 Cytochrome P450 JNE32_16635 PF04055 Radical SAM superfamily JNE32_16635 PF06968 Biotin and Thiamin Synthesis associated domain JNE32_16645 PF00155 Aminotransferase class I and II JNE32_16650 PF00202 Aminotransferase class-III JNE32_16655 PF03744 6-carboxyhexanoate--CoA ligase JNE32_16660 PF01738 Dienelactone hydrolase family JNE32_16665 PF00356 Bacterial regulatory proteins, lacI family JNE32_16670 PF01547 Bacterial extracellular solute-binding protein JNE32_16675 PF00528 Binding-protein-dependent transport system inner membrane component JNE32_16680 PF00528 Binding-protein-dependent transport system inner membrane component JNE32_16685 PF02056 Family 4 glycosyl hydrolase JNE32_16685 PF11975 Family 4 glycosyl hydrolase C-terminal domain JNE32_16690 PF00581 Rhodanese-like domain JNE32_16695 PF08264 Anticodon-binding domain of tRNA JNE32_16695 PF00133 tRNA synthetases class I (I, L, M and V) JNE32_16695 PF13603 Leucyl-tRNA synthetase, Domain 2 JNE32_16695 PF09334 tRNA synthetases class I (M) JNE32_16700 PF14074 Protein of unknown function (DUF4257) JNE32_16705 PF13426 PAS domain JNE32_16705 PF01740 STAS domain JNE32_16710 PF07690 Major Facilitator Superfamily JNE32_16715 PF04791 LMBR1-like membrane protein JNE32_16720 PF02687 FtsX-like permease family JNE32_16725 PF00005 ABC transporter JNE32_16730 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JNE32_16735 PF00486 Transcriptional regulatory protein, C terminal JNE32_16735 PF00072 Response regulator receiver domain JNE32_16740 PF02687 FtsX-like permease family JNE32_16740 PF12704 MacB-like periplasmic core domain JNE32_16745 PF00005 ABC transporter JNE32_16760 PF00005 ABC transporter JNE32_16765 PF00392 Bacterial regulatory proteins, gntR family JNE32_16775 PF10732 Protein of unknown function (DUF2524) JNE32_16780 PF04055 Radical SAM superfamily JNE32_16780 PF16199 Radical_SAM C-terminal domain JNE32_16785 PF06962 Putative rRNA methylase JNE32_16790 PF10776 Protein of unknown function (DUF2600) JNE32_16795 PF12146 Serine aminopeptidase, S33 JNE32_16800 PF00132 Bacterial transferase hexapeptide (six repeats) JNE32_16805 PF00324 Amino acid permease JNE32_16810 PF13537 Glutamine amidotransferase domain JNE32_16810 PF00733 Asparagine synthase JNE32_16815 PF00438 S-adenosylmethionine synthetase, N-terminal domain JNE32_16815 PF02772 S-adenosylmethionine synthetase, central domain JNE32_16815 PF02773 S-adenosylmethionine synthetase, C-terminal domain JNE32_16820 PF01293 Phosphoenolpyruvate carboxykinase JNE32_16825 PF10763 Protein of unknown function (DUF2584) JNE32_16830 PF00326 Prolyl oligopeptidase family JNE32_16840 PF00005 ABC transporter JNE32_16845 PF00528 Binding-protein-dependent transport system inner membrane component JNE32_16850 PF00293 NUDIX domain JNE32_16855 PF05105 Bacteriophage holin family JNE32_16860 PF00210 Ferritin-like domain JNE32_16870 PF13115 YtkA-like JNE32_16875 PF02664 S-Ribosylhomocysteinase (LuxS) JNE32_16880 PF01809 Putative membrane protein insertion efficiency factor JNE32_16885 PF00484 Carbonic anhydrase JNE32_16890 PF01197 Ribosomal protein L31 JNE32_16895 PF01654 Cytochrome bd terminal oxidase subunit I JNE32_16900 PF02322 Cytochrome bd terminal oxidase subunit II JNE32_16905 PF07561 Domain of Unknown Function (DUF1540) JNE32_16910 PF00950 ABC 3 transport family JNE32_16915 PF00950 ABC 3 transport family JNE32_16920 PF00005 ABC transporter JNE32_16925 PF01297 Zinc-uptake complex component A periplasmic JNE32_16930 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain JNE32_16930 PF13378 Enolase C-terminal domain-like JNE32_16935 PF13193 AMP-binding enzyme C-terminal domain JNE32_16935 PF00501 AMP-binding enzyme JNE32_16940 PF00378 Enoyl-CoA hydratase/isomerase JNE32_16945 PF00561 alpha/beta hydrolase fold JNE32_16950 PF16582 Middle domain of thiamine pyrophosphate JNE32_16950 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain JNE32_16950 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain JNE32_16955 PF00425 chorismate binding enzyme JNE32_16960 PF01258 Prokaryotic dksA/traR C4-type zinc finger JNE32_16965 PF00483 Nucleotidyl transferase JNE32_16970 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain JNE32_16970 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain JNE32_16970 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain JNE32_16975 PF01370 NAD dependent epimerase/dehydratase family JNE32_16980 PF13439 Glycosyltransferase Family 4 JNE32_16980 PF00534 Glycosyl transferases group 1 JNE32_16995 PF13439 Glycosyltransferase Family 4 JNE32_16995 PF00534 Glycosyl transferases group 1 JNE32_17000 PF01636 Phosphotransferase enzyme family JNE32_17005 PF03073 TspO/MBR family JNE32_17010 PF00343 Carbohydrate phosphorylase JNE32_17015 PF00534 Glycosyl transferases group 1 JNE32_17015 PF08323 Starch synthase catalytic domain JNE32_17020 PF00483 Nucleotidyl transferase JNE32_17025 PF00483 Nucleotidyl transferase JNE32_17030 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) JNE32_17030 PF00128 Alpha amylase, catalytic domain JNE32_17030 PF02806 Alpha amylase, C-terminal all-beta domain JNE32_17155 PF09515 Thiamine transporter protein (Thia_YuaJ) JNE32_17160 PF00583 Acetyltransferase (GNAT) family JNE32_17165 PF01145 SPFH domain / Band 7 family JNE32_17165 PF15975 Flotillin JNE32_17175 PF12867 DinB superfamily JNE32_17185 PF00465 Iron-containing alcohol dehydrogenase JNE32_17190 PF00171 Aldehyde dehydrogenase family JNE32_17200 PF17735 Biofilm surface layer A JNE32_17205 PF02080 TrkA-C domain JNE32_17205 PF02254 TrkA-N domain JNE32_17210 PF02386 Cation transport protein JNE32_17215 PF05360 yiaA/B two helix domain JNE32_17220 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase JNE32_17220 PF13457 GW (Gly-Tryp) dipeptide domain JNE32_17225 PF07690 Major Facilitator Superfamily JNE32_17230 PF05995 Cysteine dioxygenase type I JNE32_17240 PF02673 Bacitracin resistance protein BacA JNE32_17245 PF01594 AI-2E family transporter JNE32_17250 PF01408 Oxidoreductase family, NAD-binding Rossmann fold JNE32_17250 PF02894 Oxidoreductase family, C-terminal alpha/beta domain JNE32_17255 PF06134 L-rhamnose isomerase (RhaA) JNE32_17260 PF05336 L-rhamnose mutarotase JNE32_17265 PF00370 FGGY family of carbohydrate kinases, N-terminal domain JNE32_17265 PF02782 FGGY family of carbohydrate kinases, C-terminal domain JNE32_17270 PF00455 DeoR C terminal sensor domain JNE32_17270 PF08220 DeoR-like helix-turn-helix domain JNE32_17275 PF00596 Class II Aldolase and Adducin N-terminal domain JNE32_17280 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JNE32_17280 PF00672 HAMP domain JNE32_17280 PF02743 Cache domain JNE32_17285 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JNE32_17285 PF00672 HAMP domain JNE32_17285 PF02743 Cache domain JNE32_17290 PF00672 HAMP domain JNE32_17290 PF02743 Cache domain JNE32_17290 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JNE32_17295 PF02743 Cache domain JNE32_17295 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JNE32_17295 PF00672 HAMP domain JNE32_17310 PF01894 Uncharacterised protein family UPF0047 JNE32_17320 PF16657 Maltogenic Amylase, C-terminal domain JNE32_17320 PF00128 Alpha amylase, catalytic domain JNE32_17325 PF01595 Cyclin M transmembrane N-terminal domain JNE32_17325 PF03471 Transporter associated domain JNE32_17325 PF00571 CBS domain JNE32_17330 PF04298 Putative neutral zinc metallopeptidase JNE32_17340 PF11458 Membrane-integrating protein Mistic JNE32_17345 PF07885 Ion channel JNE32_17345 PF02254 TrkA-N domain JNE32_17350 PF08868 YugN-like family JNE32_17360 PF00342 Phosphoglucose isomerase JNE32_17365 PF00465 Iron-containing alcohol dehydrogenase JNE32_17370 PF00465 Iron-containing alcohol dehydrogenase JNE32_17375 PF04070 Domain of unknown function (DUF378) JNE32_17380 PF00575 S1 RNA binding domain JNE32_17385 PF00155 Aminotransferase class I and II JNE32_17390 PF01037 Lrp/AsnC ligand binding domain JNE32_17395 PF00561 alpha/beta hydrolase fold JNE32_17395 PF08386 TAP-like protein JNE32_17400 PF08958 Domain of unknown function (DUF1871) JNE32_17405 PF00155 Aminotransferase class I and II JNE32_17410 PF00512 His Kinase A (phospho-acceptor) domain JNE32_17410 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JNE32_17415 PF08810 Kinase associated protein B JNE32_17420 PF00929 Exonuclease JNE32_17425 PF07690 Major Facilitator Superfamily JNE32_17430 PF00912 Transglycosylase JNE32_17430 PF00905 Penicillin binding protein transpeptidase domain JNE32_17435 PF04134 Protein of unknown function, DUF393 JNE32_17440 PF17328 Family of unknown function (DUF5366) JNE32_17445 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JNE32_17445 PF17203 Single cache domain 3 JNE32_17445 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain JNE32_17445 PF00989 PAS fold JNE32_17450 PF00072 Response regulator receiver domain JNE32_17455 PF02608 ABC transporter substrate-binding protein PnrA-like JNE32_17460 PF00005 ABC transporter JNE32_17465 PF02653 Branched-chain amino acid transport system / permease component JNE32_17470 PF02653 Branched-chain amino acid transport system / permease component JNE32_17475 PF03390 2-hydroxycarboxylate transporter family JNE32_17485 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus JNE32_17485 PF00361 Proton-conducting membrane transporter JNE32_17485 PF13244 Domain of unknown function (DUF4040) JNE32_17490 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter JNE32_17495 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L JNE32_17500 PF00361 Proton-conducting membrane transporter JNE32_17505 PF01899 Na+/H+ ion antiporter subunit JNE32_17510 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) JNE32_17515 PF03334 Na+/H+ antiporter subunit JNE32_17520 PF03061 Thioesterase superfamily JNE32_17525 PF00196 Bacterial regulatory proteins, luxR family JNE32_17525 PF00072 Response regulator receiver domain JNE32_17530 PF07730 Histidine kinase JNE32_17530 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JNE32_17540 PF00348 Polyprenyl synthetase JNE32_17545 PF08181 DegQ (SacQ) family JNE32_17560 PF08668 HDOD domain JNE32_17560 PF00563 EAL domain JNE32_17565 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain JNE32_17565 PF17956 Nicotinate phosphoribosyltransferase C-terminal domain JNE32_17565 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family JNE32_17570 PF00857 Isochorismatase family JNE32_17575 PF07997 Protein of unknown function (DUF1694) JNE32_17580 PF14166 YueH-like protein JNE32_17585 PF10676 Spore germination protein gerPA/gerPF JNE32_17590 PF01594 AI-2E family transporter JNE32_17595 PF10049 Protein of unknown function (DUF2283) JNE32_17600 PF10842 Protein of unknown function (DUF2642) JNE32_17605 PF01966 HD domain JNE32_17610 PF00106 short chain dehydrogenase JNE32_17615 PF17355 Family of unknown function (DUF5383) JNE32_17625 PF12538 DNA transporter JNE32_17625 PF01580 FtsK/SpoIIIE family JNE32_17630 PF10140 WXG100 protein secretion system (Wss), protein YukC JNE32_17635 PF08817 WXG100 protein secretion system (Wss), protein YukD JNE32_17640 PF06013 Proteins of 100 residues with WXG JNE32_17645 PF06018 CodY GAF-like domain JNE32_17645 PF13556 PucR C-terminal helix-turn-helix domain JNE32_17645 PF17853 GGDEF-like domain JNE32_17650 PF01262 Alanine dehydrogenase/PNT, C-terminal domain JNE32_17650 PF05222 Alanine dehydrogenase/PNT, N-terminal domain JNE32_17655 PF10042 Uncharacterized conserved protein (DUF2278) JNE32_17660 PF03621 MbtH-like protein JNE32_17665 PF00501 AMP-binding enzyme JNE32_17665 PF13193 AMP-binding enzyme C-terminal domain JNE32_17665 PF00668 Condensation domain JNE32_17665 PF00550 Phosphopantetheine attachment site JNE32_17665 PF00975 Thioesterase domain JNE32_17670 PF00550 Phosphopantetheine attachment site JNE32_17670 PF00857 Isochorismatase family JNE32_17675 PF13193 AMP-binding enzyme C-terminal domain JNE32_17675 PF00501 AMP-binding enzyme JNE32_17680 PF00425 chorismate binding enzyme JNE32_17685 PF00106 short chain dehydrogenase JNE32_17690 PF00756 Putative esterase JNE32_17695 PF00174 Oxidoreductase molybdopterin binding domain JNE32_17700 PF02632 BioY family JNE32_17705 PF13726 Na+-H+ antiporter family JNE32_17705 PF03553 Na+/H+ antiporter family JNE32_17710 PF00883 Cytosol aminopeptidase family, catalytic domain JNE32_17710 PF02789 Cytosol aminopeptidase family, N-terminal domain JNE32_17715 PF02681 Divergent PAP2 family JNE32_17720 PF06725 3D domain JNE32_17725 PF14068 Putative membrane protein JNE32_17730 PF17302 Family of unknown function (DUF5351) JNE32_17735 PF07992 Pyridine nucleotide-disulphide oxidoreductase JNE32_17740 PF07992 Pyridine nucleotide-disulphide oxidoreductase JNE32_17750 PF00478 IMP dehydrogenase / GMP reductase domain JNE32_17755 PF04299 Putative FMN-binding domain JNE32_17760 PF00583 Acetyltransferase (GNAT) family JNE32_17765 PF01521 Iron-sulphur cluster biosynthesis JNE32_17770 PF01678 Diaminopimelate epimerase JNE32_17775 PF07662 Na+ dependent nucleoside transporter C-terminus JNE32_17775 PF01773 Na+ dependent nucleoside transporter N-terminus JNE32_17780 PF07293 Protein of unknown function (DUF1450) JNE32_17785 PF07992 Pyridine nucleotide-disulphide oxidoreductase JNE32_17790 PF07315 Protein of unknown function (DUF1462) JNE32_17795 PF01106 NifU-like domain JNE32_17800 PF07676 WD40-like Beta Propeller Repeat JNE32_17800 PF00326 Prolyl oligopeptidase family JNE32_17805 PF00288 GHMP kinases N terminal domain JNE32_17805 PF08544 GHMP kinases C terminal JNE32_17810 PF00291 Pyridoxal-phosphate dependent enzyme JNE32_17815 PF01842 ACT domain JNE32_17815 PF00742 Homoserine dehydrogenase JNE32_17815 PF03447 Homoserine dehydrogenase, NAD binding domain JNE32_17825 PF04608 Phosphatidylglycerophosphatase A JNE32_17830 PF13344 Haloacid dehalogenase-like hydrolase JNE32_17835 PF01934 Protein of unknown function DUF86 JNE32_17840 PF06265 Protein of unknown function (DUF1027) JNE32_17845 PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) JNE32_17850 PF04055 Radical SAM superfamily JNE32_17850 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family JNE32_17855 PF01551 Peptidase family M23 JNE32_17860 PF09560 Sporulation protein YunB (Spo_YunB) JNE32_17865 PF08827 Domain of unknown function (DUF1805) JNE32_17870 PF02872 5'-nucleotidase, C-terminal domain JNE32_17875 PF01925 Sulfite exporter TauE/SafE JNE32_17880 PF01904 Protein of unknown function DUF72 JNE32_17890 PF01979 Amidohydrolase family JNE32_17895 PF13556 PucR C-terminal helix-turn-helix domain JNE32_17895 PF17853 GGDEF-like domain JNE32_17895 PF07905 Purine catabolism regulatory protein-like family JNE32_17900 PF00860 Permease family JNE32_17905 PF00860 Permease family JNE32_17910 PF01014 Uricase JNE32_17910 PF09349 OHCU decarboxylase JNE32_17915 PF00576 HIUase/Transthyretin family JNE32_17920 PF09680 Family of unknown function JNE32_17925 PF01799 [2Fe-2S] binding domain JNE32_17925 PF00111 2Fe-2S iron-sulfur cluster binding domain JNE32_17930 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase JNE32_17930 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain JNE32_17935 PF00941 FAD binding domain in molybdopterin dehydrogenase JNE32_17940 PF12804 MobA-like NTP transferase domain JNE32_17945 PF13478 XdhC Rossmann domain JNE32_17945 PF02625 XdhC and CoxI family JNE32_17950 PF00266 Aminotransferase class-V JNE32_17955 PF01546 Peptidase family M20/M25/M40 JNE32_17965 PF04231 Endonuclease I JNE32_17970 PF03459 TOBE domain JNE32_17970 PF17912 MalK OB fold domain JNE32_17970 PF00005 ABC transporter JNE32_17975 PF07702 UTRA domain JNE32_17975 PF00392 Bacterial regulatory proteins, gntR family JNE32_17980 PF00294 pfkB family carbohydrate kinase JNE32_17985 PF00528 Binding-protein-dependent transport system inner membrane component JNE32_17990 PF00528 Binding-protein-dependent transport system inner membrane component JNE32_17995 PF01547 Bacterial extracellular solute-binding protein JNE32_18000 PF01380 SIS domain JNE32_18005 PF01541 GIY-YIG catalytic domain JNE32_18010 PF01266 FAD dependent oxidoreductase JNE32_18025 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily JNE32_18035 PF01458 Uncharacterized protein family (UPF0051) JNE32_18040 PF01592 NifU-like N terminal domain JNE32_18045 PF00266 Aminotransferase class-V JNE32_18050 PF01458 Uncharacterized protein family (UPF0051) JNE32_18055 PF00005 ABC transporter JNE32_18065 PF02627 Carboxymuconolactone decarboxylase family JNE32_18070 PF03180 NLPA lipoprotein JNE32_18075 PF00528 Binding-protein-dependent transport system inner membrane component JNE32_18080 PF09383 NIL domain JNE32_18080 PF00005 ABC transporter JNE32_18085 PF02036 SCP-2 sterol transfer family JNE32_18090 PF00085 Thioredoxin JNE32_18095 PF01751 Toprim domain JNE32_18100 PF10830 Protein of unknown function (DUF2553) JNE32_18105 PF01597 Glycine cleavage H-protein JNE32_18110 PF03960 ArsC family JNE32_18115 PF02771 Acyl-CoA dehydrogenase, N-terminal domain JNE32_18115 PF02770 Acyl-CoA dehydrogenase, middle domain JNE32_18115 PF00441 Acyl-CoA dehydrogenase, C-terminal domain JNE32_18120 PF00108 Thiolase, N-terminal domain JNE32_18120 PF02803 Thiolase, C-terminal domain JNE32_18125 PF00378 Enoyl-CoA hydratase/isomerase JNE32_18125 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain JNE32_18125 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain JNE32_18130 PF14115 YuzL-like protein JNE32_18135 PF01619 Proline dehydrogenase JNE32_18145 PF07875 Coat F domain JNE32_18150 PF01047 MarR family JNE32_18155 PF07690 Major Facilitator Superfamily JNE32_18160 PF14552 Tautomerase enzyme JNE32_18170 PF03466 LysR substrate binding domain JNE32_18170 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JNE32_18175 PF10835 Protein of unknown function (DUF2573) JNE32_18180 PF00005 ABC transporter JNE32_18185 PF14039 YusW-like protein JNE32_18195 PF00106 short chain dehydrogenase JNE32_18200 PF00210 Ferritin-like domain JNE32_18205 PF13180 PDZ domain JNE32_18210 PF00486 Transcriptional regulatory protein, C terminal JNE32_18210 PF00072 Response regulator receiver domain JNE32_18215 PF00672 HAMP domain JNE32_18215 PF00512 His Kinase A (phospho-acceptor) domain JNE32_18215 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JNE32_18225 PF00440 Bacterial regulatory proteins, tetR family JNE32_18230 PF00206 Lyase JNE32_18230 PF10415 Fumarase C C-terminus JNE32_18235 PF13113 Protein of unknown function (DUF3970) JNE32_18240 PF03323 Bacillus/Clostridium GerA spore germination protein JNE32_18245 PF03845 Spore germination protein JNE32_18250 PF05504 Spore germination B3/ GerAC like, C-terminal JNE32_18255 PF00072 Response regulator receiver domain JNE32_18255 PF00196 Bacterial regulatory proteins, luxR family JNE32_18260 PF00672 HAMP domain JNE32_18260 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JNE32_18260 PF07730 Histidine kinase JNE32_18265 PF09922 Cell wall-active antibiotics response 4TMS YvqF JNE32_18270 PF13349 Putative adhesin JNE32_18275 PF04012 PspA/IM30 family JNE32_18285 PF07690 Major Facilitator Superfamily JNE32_18290 PF01923 Cobalamin adenosyltransferase JNE32_18295 PF00005 ABC transporter JNE32_18300 PF01032 FecCD transport family JNE32_18305 PF01497 Periplasmic binding protein JNE32_18310 PF00106 short chain dehydrogenase JNE32_18315 PF08450 SMP-30/Gluconolactonase/LRE-like region JNE32_18320 PF00512 His Kinase A (phospho-acceptor) domain JNE32_18320 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JNE32_18325 PF00072 Response regulator receiver domain JNE32_18325 PF00486 Transcriptional regulatory protein, C terminal JNE32_18335 PF04545 Sigma-70, region 4 JNE32_18340 PF12841 YvrJ protein family JNE32_18345 PF00190 Cupin JNE32_18350 PF14184 Regulatory protein YrvL JNE32_18355 PF02687 FtsX-like permease family JNE32_18355 PF12704 MacB-like periplasmic core domain JNE32_18360 PF00005 ABC transporter JNE32_18365 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion JNE32_18370 PF00005 ABC transporter JNE32_18375 PF01032 FecCD transport family JNE32_18380 PF01032 FecCD transport family JNE32_18385 PF01497 Periplasmic binding protein JNE32_18390 PF13520 Amino acid permease JNE32_18395 PF09575 Small spore protein J (Spore_SspJ) JNE32_18400 PF04307 LexA-binding, inner membrane-associated putative hydrolase JNE32_18405 PF00884 Sulfatase JNE32_18410 PF12727 PBP superfamily domain JNE32_18410 PF12728 Helix-turn-helix domain JNE32_18420 PF00528 Binding-protein-dependent transport system inner membrane component JNE32_18425 PF00248 Aldo/keto reductase family JNE32_18435 PF00999 Sodium/hydrogen exchanger family JNE32_18440 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain JNE32_18440 PF01077 Nitrite and sulphite reductase 4Fe-4S domain JNE32_18445 PF00175 Oxidoreductase NAD-binding domain JNE32_18445 PF00258 Flavodoxin JNE32_18445 PF00667 FAD binding domain JNE32_18450 PF13538 UvrD-like helicase C-terminal domain JNE32_18460 PF03458 UPF0126 domain JNE32_18465 PF02600 Disulfide bond formation protein DsbB JNE32_18470 PF13462 Thioredoxin JNE32_18475 PF00403 Heavy-metal-associated domain JNE32_18480 PF00403 Heavy-metal-associated domain JNE32_18485 PF00403 Heavy-metal-associated domain JNE32_18490 PF02583 Metal-sensitive transcriptional repressor JNE32_18495 PF02894 Oxidoreductase family, C-terminal alpha/beta domain JNE32_18495 PF01408 Oxidoreductase family, NAD-binding Rossmann fold JNE32_18500 PF02525 Flavodoxin-like fold JNE32_18515 PF00893 Small Multidrug Resistance protein JNE32_18520 PF00440 Bacterial regulatory proteins, tetR family JNE32_18525 PF00106 short chain dehydrogenase JNE32_18535 PF01668 SmpB protein JNE32_18540 PF17876 Cold shock domain JNE32_18540 PF00773 RNB domain JNE32_18540 PF08206 Ribonuclease B OB domain JNE32_18540 PF00575 S1 RNA binding domain JNE32_18545 PF12146 Serine aminopeptidase, S33 JNE32_18550 PF03840 Preprotein translocase SecG subunit JNE32_18555 PF00561 alpha/beta hydrolase fold JNE32_18560 PF01381 Helix-turn-helix JNE32_18575 PF01638 HxlR-like helix-turn-helix JNE32_18580 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JNE32_18580 PF00672 HAMP domain JNE32_18580 PF12729 Four helix bundle sensory module for signal transduction JNE32_18585 PF00528 Binding-protein-dependent transport system inner membrane component JNE32_18590 PF04069 Substrate binding domain of ABC-type glycine betaine transport system JNE32_18595 PF00528 Binding-protein-dependent transport system inner membrane component JNE32_18600 PF00005 ABC transporter JNE32_18600 PF00571 CBS domain JNE32_18605 PF12802 MarR family JNE32_18610 PF00528 Binding-protein-dependent transport system inner membrane component JNE32_18615 PF04069 Substrate binding domain of ABC-type glycine betaine transport system JNE32_18620 PF00528 Binding-protein-dependent transport system inner membrane component JNE32_18625 PF00005 ABC transporter JNE32_18625 PF00571 CBS domain JNE32_18630 PF12802 MarR family JNE32_18635 PF01914 MarC family integral membrane protein JNE32_18640 PF08000 Bacterial PH domain JNE32_18640 PF11724 YvbH-like oligomerisation region JNE32_18650 PF13240 zinc-ribbon domain JNE32_18655 PF00583 Acetyltransferase (GNAT) family JNE32_18660 PF00113 Enolase, C-terminal TIM barrel domain JNE32_18660 PF03952 Enolase, N-terminal domain JNE32_18665 PF01676 Metalloenzyme superfamily JNE32_18665 PF06415 BPG-independent PGAM N-terminus (iPGM_N) JNE32_18670 PF00121 Triosephosphate isomerase JNE32_18675 PF00162 Phosphoglycerate kinase JNE32_18680 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain JNE32_18680 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain JNE32_18685 PF04198 Putative sugar-binding domain JNE32_18690 PF00083 Sugar (and other) transporter JNE32_18695 PF00392 Bacterial regulatory proteins, gntR family JNE32_18700 PF00296 Luciferase-like monooxygenase JNE32_18710 PF03466 LysR substrate binding domain JNE32_18710 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JNE32_18715 PF00892 EamA-like transporter family JNE32_18720 PF00324 Amino acid permease JNE32_18725 PF00704 Glycosyl hydrolases family 18 JNE32_18730 PF02589 LUD domain JNE32_18735 PF02589 LUD domain JNE32_18735 PF13183 4Fe-4S dicluster domain JNE32_18735 PF11870 Domain of unknown function (DUF3390) JNE32_18740 PF02754 Cysteine-rich domain JNE32_18745 PF00072 Response regulator receiver domain JNE32_18745 PF00196 Bacterial regulatory proteins, luxR family JNE32_18750 PF07730 Histidine kinase JNE32_18750 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JNE32_18760 PF00005 ABC transporter JNE32_18765 PF12697 Alpha/beta hydrolase family JNE32_18770 PF07228 Stage II sporulation protein E (SpoIIE) JNE32_18770 PF13426 PAS domain JNE32_18775 PF07745 Glycosyl hydrolase family 53 JNE32_18780 PF08532 Beta-galactosidase trimerisation domain JNE32_18780 PF02449 Beta-galactosidase JNE32_18780 PF08533 Beta-galactosidase C-terminal domain JNE32_18785 PF00528 Binding-protein-dependent transport system inner membrane component JNE32_18790 PF00528 Binding-protein-dependent transport system inner membrane component JNE32_18795 PF13416 Bacterial extracellular solute-binding protein JNE32_18800 PF00356 Bacterial regulatory proteins, lacI family JNE32_18805 PF00392 Bacterial regulatory proteins, gntR family JNE32_18805 PF07729 FCD domain JNE32_18810 PF02652 L-lactate permease JNE32_18815 PF00309 Sigma-54 factor, Activator interacting domain (AID) JNE32_18815 PF04552 Sigma-54, DNA binding domain JNE32_18815 PF04963 Sigma-54 factor, core binding domain JNE32_18820 PF09628 YvfG protein JNE32_18825 PF04230 Polysaccharide pyruvyl transferase JNE32_18830 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family JNE32_18835 PF00132 Bacterial transferase hexapeptide (six repeats) JNE32_18835 PF17836 PglD N-terminal domain JNE32_18840 PF02397 Bacterial sugar transferase JNE32_18845 PF14667 Polysaccharide biosynthesis C-terminal domain JNE32_18845 PF01943 Polysaccharide biosynthesis protein JNE32_18850 PF00535 Glycosyl transferase family 2 JNE32_18855 PF04230 Polysaccharide pyruvyl transferase JNE32_18860 PF00535 Glycosyl transferase family 2 JNE32_18870 PF00534 Glycosyl transferases group 1 JNE32_18870 PF13439 Glycosyltransferase Family 4 JNE32_18875 PF00535 Glycosyl transferase family 2 JNE32_18880 PF00534 Glycosyl transferases group 1 JNE32_18880 PF13439 Glycosyltransferase Family 4 JNE32_18885 PF02719 Polysaccharide biosynthesis protein JNE32_18890 PF13614 AAA domain JNE32_18895 PF02706 Chain length determinant protein JNE32_18900 PF01381 Helix-turn-helix JNE32_18900 PF08671 Anti-repressor SinI JNE32_18905 PF00135 Carboxylesterase family JNE32_18915 PF05870 Phenolic acid decarboxylase (PAD) JNE32_18925 PF01177 Asp/Glu/Hydantoin racemase JNE32_18930 PF11954 Domain of unknown function (DUF3471) JNE32_18930 PF00144 Beta-lactamase JNE32_18935 PF02435 Levansucrase/Invertase JNE32_18940 PF08244 Glycosyl hydrolases family 32 C terminal JNE32_18940 PF00251 Glycosyl hydrolases family 32 N-terminal domain JNE32_18945 PF13520 Amino acid permease JNE32_18950 PF17934 Tetracyclin repressor-like, C-terminal domain JNE32_18950 PF00440 Bacterial regulatory proteins, tetR family JNE32_18955 PF00893 Small Multidrug Resistance protein JNE32_18960 PF00893 Small Multidrug Resistance protein JNE32_18965 PF11553 Protein of unknown function (DUF3231) JNE32_18970 PF01565 FAD binding domain JNE32_18970 PF08031 Berberine and berberine like JNE32_18975 PF01734 Patatin-like phospholipase JNE32_18985 PF00574 Clp protease JNE32_18990 PF13419 Haloacid dehalogenase-like hydrolase JNE32_18995 PF00128 Alpha amylase, catalytic domain JNE32_18995 PF16657 Maltogenic Amylase, C-terminal domain JNE32_19005 PF06691 Protein of unknown function (DUF1189) JNE32_19010 PF00528 Binding-protein-dependent transport system inner membrane component JNE32_19015 PF00528 Binding-protein-dependent transport system inner membrane component JNE32_19020 PF13416 Bacterial extracellular solute-binding protein JNE32_19025 PF02903 Alpha amylase, N-terminal ig-like domain JNE32_19025 PF00128 Alpha amylase, catalytic domain JNE32_19030 PF00356 Bacterial regulatory proteins, lacI family JNE32_19035 PF03641 Possible lysine decarboxylase JNE32_19040 PF03819 MazG nucleotide pyrophosphohydrolase domain JNE32_19045 PF01740 STAS domain JNE32_19045 PF00916 Sulfate permease family JNE32_19050 PF00484 Carbonic anhydrase JNE32_19055 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain JNE32_19055 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain JNE32_19060 PF02687 FtsX-like permease family JNE32_19065 PF00005 ABC transporter JNE32_19070 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JNE32_19075 PF00486 Transcriptional regulatory protein, C terminal JNE32_19075 PF00072 Response regulator receiver domain JNE32_19085 PF00797 N-acetyltransferase JNE32_19090 PF00381 PTS HPr component phosphorylation site JNE32_19095 PF10298 WhiA N-terminal LAGLIDADG-like domain JNE32_19095 PF14527 WhiA LAGLIDADG-like domain JNE32_19095 PF02650 WhiA C-terminal HTH domain JNE32_19100 PF01933 Uncharacterised protein family UPF0052 JNE32_19105 PF03668 P-loop ATPase protein family JNE32_19110 PF00293 NUDIX domain JNE32_19115 PF07992 Pyridine nucleotide-disulphide oxidoreductase JNE32_19120 PF00877 NlpC/P60 family JNE32_19130 PF00664 ABC transporter transmembrane region JNE32_19130 PF00005 ABC transporter JNE32_19150 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase JNE32_19150 PF01502 Phosphoribosyl-AMP cyclohydrolase JNE32_19155 PF00977 Histidine biosynthesis protein JNE32_19160 PF00977 Histidine biosynthesis protein JNE32_19165 PF00117 Glutamine amidotransferase class-I JNE32_19170 PF00475 Imidazoleglycerol-phosphate dehydratase JNE32_19175 PF00815 Histidinol dehydrogenase JNE32_19180 PF01634 ATP phosphoribosyltransferase JNE32_19185 PF13393 Histidyl-tRNA synthetase JNE32_19190 PF13529 Peptidase_C39 like family JNE32_19195 PF03211 Pectate lyase JNE32_19200 PF14602 Hexapeptide repeat of succinyl-transferase JNE32_19205 PF13419 Haloacid dehalogenase-like hydrolase JNE32_19210 PF07670 Nucleoside recognition JNE32_19215 PF01790 Prolipoprotein diacylglyceryl transferase JNE32_19220 PF02603 HPr Serine kinase N terminus JNE32_19220 PF07475 HPr Serine kinase C-terminal domain JNE32_19225 PF01979 Amidohydrolase family JNE32_19230 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase JNE32_19235 PF00392 Bacterial regulatory proteins, gntR family JNE32_19235 PF07702 UTRA domain JNE32_19240 PF00149 Calcineurin-like phosphoesterase JNE32_19245 PF01047 MarR family JNE32_19255 PF16715 Cyclodipeptide synthase JNE32_19260 PF01047 MarR family JNE32_19265 PF07690 Major Facilitator Superfamily JNE32_19270 PF04020 Mycobacterial 4 TMS phage holin, superfamily IV JNE32_19275 PF04024 PspC domain JNE32_19280 PF13349 Putative adhesin JNE32_19295 PF00669 Bacterial flagellin N-terminal helical region JNE32_19295 PF00700 Bacterial flagellin C-terminal helical region JNE32_19300 PF17755 UvrA DNA-binding domain JNE32_19300 PF17760 UvrA interaction domain JNE32_19300 PF00005 ABC transporter JNE32_19305 PF17757 UvrB interaction domain JNE32_19305 PF12344 Ultra-violet resistance protein B JNE32_19305 PF02151 UvrB/uvrC motif JNE32_19305 PF04851 Type III restriction enzyme, res subunit JNE32_19305 PF00271 Helicase conserved C-terminal domain JNE32_19310 PF09964 Uncharacterized protein conserved in bacteria (DUF2198) JNE32_19315 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain JNE32_19315 PF00391 PEP-utilising enzyme, mobile domain JNE32_19320 PF00440 Bacterial regulatory proteins, tetR family JNE32_19325 PF07690 Major Facilitator Superfamily JNE32_19330 PF17820 PDZ domain JNE32_19335 PF17423 Swarming motility protein JNE32_19340 PF17820 PDZ domain JNE32_19340 PF01471 Putative peptidoglycan binding domain JNE32_19340 PF03572 Peptidase family S41 JNE32_19345 PF18075 FtsX extracellular domain JNE32_19345 PF02687 FtsX-like permease family JNE32_19350 PF00005 ABC transporter JNE32_19355 PF13442 Cytochrome C oxidase, cbb3-type, subunit III JNE32_19360 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 JNE32_19360 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) JNE32_19370 PF07516 SecA Wing and Scaffold domain JNE32_19370 PF07517 SecA DEAD-like domain JNE32_19370 PF02810 SEC-C motif JNE32_19370 PF01043 SecA preprotein cross-linking domain JNE32_19375 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein JNE32_19375 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus JNE32_19390 PF02561 Flagellar protein FliS JNE32_19395 PF02465 Flagellar hook-associated protein 2 N-terminus JNE32_19395 PF07195 Flagellar hook-associated protein 2 C-terminus JNE32_19395 PF07196 Flagellin hook IN motif JNE32_19400 PF03646 FlaG protein JNE32_19405 PF00669 Bacterial flagellin N-terminal helical region JNE32_19405 PF00700 Bacterial flagellin C-terminal helical region JNE32_19410 PF02599 Global regulator protein family JNE32_19415 PF02623 FliW protein JNE32_19425 PF00669 Bacterial flagellin N-terminal helical region JNE32_19425 PF00700 Bacterial flagellin C-terminal helical region JNE32_19430 PF06429 Flagellar basal body rod FlgEFG protein C-terminal JNE32_19430 PF00460 Flagella basal body rod protein JNE32_19435 PF05130 FlgN protein JNE32_19440 PF04316 Anti-sigma-28 factor, FlgM JNE32_19455 PF10719 Late competence development protein ComFB JNE32_19460 PF04851 Type III restriction enzyme, res subunit JNE32_19460 PF00271 Helicase conserved C-terminal domain JNE32_19465 PF02645 Uncharacterised protein, DegV family COG1307 JNE32_19475 PF07730 Histidine kinase JNE32_19475 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JNE32_19475 PF05384 Sensor protein DegS JNE32_19480 PF01205 Uncharacterized protein family UPF0029 JNE32_19480 PF09186 Domain of unknown function (DUF1949) JNE32_19485 PF03816 Cell envelope-related transcriptional attenuator domain JNE32_19490 PF00953 Glycosyl transferase family 4 JNE32_19500 PF00535 Glycosyl transferase family 2 JNE32_19505 PF02706 Chain length determinant protein JNE32_19510 PF04932 O-Antigen ligase JNE32_19515 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain JNE32_19515 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain JNE32_19515 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain JNE32_19520 PF00534 Glycosyl transferases group 1 JNE32_19520 PF13439 Glycosyltransferase Family 4 JNE32_19525 PF14667 Polysaccharide biosynthesis C-terminal domain JNE32_19525 PF01943 Polysaccharide biosynthesis protein JNE32_19530 PF02397 Bacterial sugar transferase JNE32_19535 PF00535 Glycosyl transferase family 2 JNE32_19535 PF18674 TarS beta-glycosyltransferase C-terminal domain 1 JNE32_19540 PF01520 N-acetylmuramoyl-L-alanine amidase JNE32_19540 PF04122 Putative cell wall binding repeat 2 JNE32_19545 PF04122 Putative cell wall binding repeat 2 JNE32_19545 PF08486 Stage II sporulation protein JNE32_19555 PF03816 Cell envelope-related transcriptional attenuator domain JNE32_19560 PF02350 UDP-N-acetylglucosamine 2-epimerase JNE32_19570 PF00534 Glycosyl transferases group 1 JNE32_19580 PF00483 Nucleotidyl transferase JNE32_19585 PF00005 ABC transporter JNE32_19590 PF01061 ABC-2 type transporter JNE32_19605 PF00535 Glycosyl transferase family 2 JNE32_19605 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase JNE32_19610 PF00535 Glycosyl transferase family 2 JNE32_19615 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase JNE32_19620 PF01467 Cytidylyltransferase-like JNE32_19625 PF03808 Glycosyl transferase WecB/TagA/CpsF family JNE32_19630 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase JNE32_19635 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase JNE32_19640 PF08240 Alcohol dehydrogenase GroES-like domain JNE32_19640 PF16912 Glucose dehydrogenase C-terminus JNE32_19645 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase JNE32_19650 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase JNE32_19655 PF08239 Bacterial SH3 domain JNE32_19655 PF05036 Sporulation related domain JNE32_19655 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase JNE32_19660 PF01238 Phosphomannose isomerase type I JNE32_19665 PF03323 Bacillus/Clostridium GerA spore germination protein JNE32_19670 PF03845 Spore germination protein JNE32_19675 PF05504 Spore germination B3/ GerAC like, C-terminal JNE32_19680 PF00083 Sugar (and other) transporter JNE32_19685 PF03816 Cell envelope-related transcriptional attenuator domain JNE32_19695 PF00877 NlpC/P60 family JNE32_19705 PF09587 Bacterial capsule synthesis protein PGA_cap JNE32_19710 PF14102 Capsule biosynthesis CapC JNE32_19715 PF08245 Mur ligase middle domain JNE32_19720 PF00356 Bacterial regulatory proteins, lacI family JNE32_19725 PF00294 pfkB family carbohydrate kinase JNE32_19730 PF05025 RbsD / FucU transport protein family JNE32_19735 PF00005 ABC transporter JNE32_19740 PF02653 Branched-chain amino acid transport system / permease component JNE32_19745 PF13407 Periplasmic binding protein domain JNE32_19750 PF08239 Bacterial SH3 domain JNE32_19755 PF13031 Protein of unknown function (DUF3892) JNE32_19760 PF02525 Flavodoxin-like fold JNE32_19765 PF03306 Alpha-acetolactate decarboxylase JNE32_19770 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain JNE32_19770 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain JNE32_19770 PF00205 Thiamine pyrophosphate enzyme, central domain JNE32_19775 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JNE32_19775 PF03466 LysR substrate binding domain JNE32_19780 PF02040 Arsenical pump membrane protein JNE32_19795 PF08757 CotH kinase protein JNE32_19805 PF01613 Flavin reductase like domain JNE32_19810 PF13789 Domain of unknown function (DUF4181) JNE32_19820 PF13404 AsnC-type helix-turn-helix domain JNE32_19820 PF01037 Lrp/AsnC ligand binding domain JNE32_19825 PF02417 Chromate transporter JNE32_19830 PF02417 Chromate transporter JNE32_19840 PF03358 NADPH-dependent FMN reductase JNE32_19845 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JNE32_19845 PF03466 LysR substrate binding domain JNE32_19850 PF04493 Endonuclease V JNE32_19875 PF14431 YwqJ-like deaminase JNE32_19875 PF14449 Pre-toxin TG JNE32_19875 PF04740 LXG domain of WXG superfamily JNE32_19885 PF16888 Domain of unknown function (DUF5082) JNE32_19895 PF09234 Domain of unknown function (DUF1963) JNE32_19900 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain JNE32_19900 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain JNE32_19900 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain JNE32_19910 PF13614 AAA domain JNE32_19915 PF02706 Chain length determinant protein JNE32_19915 PF13807 G-rich domain on putative tyrosine kinase JNE32_19925 PF04434 SWIM zinc finger JNE32_19930 PF00176 SNF2 family N-terminal domain JNE32_19930 PF00271 Helicase conserved C-terminal domain JNE32_19930 PF12419 SNF2 Helicase protein JNE32_19940 PF08220 DeoR-like helix-turn-helix domain JNE32_19940 PF00455 DeoR C terminal sensor domain JNE32_19945 PF00436 Single-strand binding protein family JNE32_19955 PF14183 YwpF-like protein JNE32_19960 PF04203 Sortase domain JNE32_19970 PF06580 Histidine kinase JNE32_19970 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JNE32_19975 PF01741 Large-conductance mechanosensitive channel, MscL JNE32_19980 PF07977 FabA-like domain JNE32_19985 PF18801 response regulator aspartate phosphatase H, N terminal JNE32_19990 PF06429 Flagellar basal body rod FlgEFG protein C-terminal JNE32_19990 PF00460 Flagella basal body rod protein JNE32_19995 PF00460 Flagella basal body rod protein JNE32_19995 PF06429 Flagellar basal body rod FlgEFG protein C-terminal JNE32_20005 PF12116 Stage III sporulation protein D JNE32_20015 PF01047 MarR family JNE32_20020 PF07690 Major Facilitator Superfamily JNE32_20025 PF13229 Right handed beta helix region JNE32_20030 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin JNE32_20035 PF07690 Major Facilitator Superfamily JNE32_20040 PF00857 Isochorismatase family JNE32_20050 PF00909 Ammonium Transporter Family JNE32_20055 PF00543 Nitrogen regulatory protein P-II JNE32_20060 PF01569 PAP2 superfamily JNE32_20065 PF04892 VanZ like family JNE32_20070 PF01551 Peptidase family M23 JNE32_20075 PF00583 Acetyltransferase (GNAT) family JNE32_20080 PF17319 Family of unknown function (DUF5362) JNE32_20090 PF17370 Family of unknown function (DUF5392) JNE32_20095 PF13396 Phospholipase_D-nuclease N-terminal JNE32_20095 PF13091 PLD-like domain JNE32_20100 PF07739 TipAS antibiotic-recognition domain JNE32_20100 PF13411 MerR HTH family regulatory protein JNE32_20105 PF17319 Family of unknown function (DUF5362) JNE32_20110 PF13460 NAD(P)H-binding JNE32_20115 PF02082 Transcriptional regulator JNE32_20120 PF01979 Amidohydrolase family JNE32_20120 PF00449 Urease alpha-subunit, N-terminal domain JNE32_20125 PF00699 Urease beta subunit JNE32_20130 PF00547 Urease, gamma subunit JNE32_20145 PF05532 CsbD-like JNE32_20155 PF18801 response regulator aspartate phosphatase H, N terminal JNE32_20155 PF17874 MalT-like TPR region JNE32_20160 PF04055 Radical SAM superfamily JNE32_20160 PF06463 Molybdenum Cofactor Synthesis C JNE32_20165 PF02634 FdhD/NarQ family JNE32_20175 PF00092 von Willebrand factor type A domain JNE32_20185 PF00092 von Willebrand factor type A domain JNE32_20190 PF08486 Stage II sporulation protein JNE32_20195 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) JNE32_20200 PF08680 TATA-box binding JNE32_20205 PF06612 Protein of unknown function (DUF1146) JNE32_20215 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain JNE32_20215 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain JNE32_20220 PF02874 ATP synthase alpha/beta family, beta-barrel domain JNE32_20220 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain JNE32_20225 PF00231 ATP synthase JNE32_20230 PF02874 ATP synthase alpha/beta family, beta-barrel domain JNE32_20230 PF00306 ATP synthase alpha/beta chain, C terminal domain JNE32_20230 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain JNE32_20235 PF00213 ATP synthase delta (OSCP) subunit JNE32_20240 PF00430 ATP synthase B/B' CF(0) JNE32_20245 PF00137 ATP synthase subunit C JNE32_20250 PF00119 ATP synthase A chain JNE32_20255 PF03899 ATP synthase I chain JNE32_20265 PF00464 Serine hydroxymethyltransferase JNE32_20270 PF04260 Protein of unknown function (DUF436) JNE32_20275 PF02502 Ribose/Galactose Isomerase JNE32_20280 PF01451 Low molecular weight phosphotyrosine protein phosphatase JNE32_20285 PF02659 Putative manganese efflux pump JNE32_20290 PF01300 Telomere recombination JNE32_20290 PF03481 Putative GTP-binding controlling metal-binding JNE32_20300 PF09551 Stage II sporulation protein R (spore_II_R) JNE32_20305 PF17094 Uncharacterised protein family (UPF0715) JNE32_20310 PF17247 Family of unknown function (DUF5316) JNE32_20315 PF17827 PrmC N-terminal domain JNE32_20315 PF05175 Methyltransferase small domain JNE32_20320 PF00472 RF-1 domain JNE32_20320 PF03462 PCRF domain JNE32_20325 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily JNE32_20330 PF13411 MerR HTH family regulatory protein JNE32_20335 PF03547 Membrane transport protein JNE32_20340 PF00390 Malic enzyme, N-terminal domain JNE32_20340 PF03949 Malic enzyme, NAD binding domain JNE32_20345 PF00265 Thymidine kinase JNE32_20350 PF01197 Ribosomal protein L31 JNE32_20355 PF07497 Rho termination factor, RNA-binding domain JNE32_20355 PF07498 Rho termination factor, N-terminal domain JNE32_20355 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain JNE32_20365 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded JNE32_20370 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) JNE32_20375 PF00923 Transaldolase/Fructose-6-phosphate aldolase JNE32_20380 PF01116 Fructose-bisphosphate aldolase class-II JNE32_20385 PF00072 Response regulator receiver domain JNE32_20390 PF10740 Domain of unknown function (DUF2529) JNE32_20395 PF00117 Glutamine amidotransferase class-I JNE32_20395 PF06418 CTP synthase N-terminus JNE32_20400 PF05066 HB1, ASXL, restriction endonuclease HTH domain JNE32_20405 PF02771 Acyl-CoA dehydrogenase, N-terminal domain JNE32_20405 PF02770 Acyl-CoA dehydrogenase, middle domain JNE32_20405 PF00441 Acyl-CoA dehydrogenase, C-terminal domain JNE32_20410 PF13183 4Fe-4S dicluster domain JNE32_20410 PF02754 Cysteine-rich domain JNE32_20415 PF13091 PLD-like domain JNE32_20420 PF03851 UV-endonuclease UvdE JNE32_20430 PF01872 RibD C-terminal domain JNE32_20435 PF00664 ABC transporter transmembrane region JNE32_20435 PF00005 ABC transporter JNE32_20440 PF13396 Phospholipase_D-nuclease N-terminal JNE32_20440 PF13091 PLD-like domain JNE32_20450 PF02665 Nitrate reductase gamma subunit JNE32_20455 PF02613 Nitrate reductase delta subunit JNE32_20460 PF13247 4Fe-4S dicluster domain JNE32_20460 PF14711 Respiratory nitrate reductase beta C-terminal JNE32_20465 PF14710 Respiratory nitrate reductase alpha N-terminal JNE32_20465 PF01568 Molydopterin dinucleotide binding domain JNE32_20465 PF00384 Molybdopterin oxidoreductase JNE32_20475 PF14256 YwiC-like protein JNE32_20480 PF00325 Bacterial regulatory proteins, crp family JNE32_20480 PF00027 Cyclic nucleotide-binding domain JNE32_20485 PF07690 Major Facilitator Superfamily JNE32_20490 PF00750 tRNA synthetases class I (R) JNE32_20490 PF05746 DALR anticodon binding domain JNE32_20490 PF03485 Arginyl tRNA synthetase N terminal domain JNE32_20495 PF09148 Domain of unknown function (DUF1934) JNE32_20500 PF11420 Bacteriocin subtilosin A JNE32_20520 PF00005 ABC transporter JNE32_20530 PF05193 Peptidase M16 inactive domain JNE32_20535 PF00675 Insulinase (Peptidase family M16) JNE32_20555 PF18801 response regulator aspartate phosphatase H, N terminal JNE32_20560 PF11131 Rap-phr extracellular signalling JNE32_20585 PF00005 ABC transporter JNE32_20595 PF00491 Arginase family JNE32_20600 PF17284 Spermidine synthase tetramerisation domain JNE32_20605 PF00905 Penicillin binding protein transpeptidase domain JNE32_20605 PF00912 Transglycosylase JNE32_20610 PF08741 YwhD family JNE32_20615 PF02163 Peptidase family M50 JNE32_20620 PF01361 Tautomerase enzyme JNE32_20625 PF01047 MarR family JNE32_20630 PF03129 Anticodon binding domain JNE32_20630 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) JNE32_20630 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain JNE32_20630 PF02824 TGS domain JNE32_20635 PF07690 Major Facilitator Superfamily JNE32_20640 PF02082 Transcriptional regulator JNE32_20650 PF01966 HD domain JNE32_20655 PF07293 Protein of unknown function (DUF1450) JNE32_20665 PF00892 EamA-like transporter family JNE32_20670 PF03099 Biotin/lipoate A/B protein ligase family JNE32_20675 PF03466 LysR substrate binding domain JNE32_20675 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JNE32_20680 PF01515 Phosphate acetyl/butaryl transferase JNE32_20685 PF06778 Chlorite dismutase JNE32_20695 PF00155 Aminotransferase class I and II JNE32_20700 PF07690 Major Facilitator Superfamily JNE32_20715 PF07883 Cupin domain JNE32_20725 PF07690 Major Facilitator Superfamily JNE32_20730 PF00324 Amino acid permease JNE32_20735 PF01546 Peptidase family M20/M25/M40 JNE32_20740 PF00171 Aldehyde dehydrogenase family JNE32_20745 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain JNE32_20745 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase JNE32_20750 PF17735 Biofilm surface layer A JNE32_20755 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase JNE32_20760 PF04321 RmlD substrate binding domain JNE32_20765 PF16363 GDP-mannose 4,6 dehydratase JNE32_20770 PF00483 Nucleotidyl transferase JNE32_20775 PF04101 Glycosyltransferase family 28 C-terminal domain JNE32_20780 PF02348 Cytidylyltransferase JNE32_20785 PF08666 SAF domain JNE32_20785 PF03102 NeuB family JNE32_20790 PF00583 Acetyltransferase (GNAT) family JNE32_20795 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family JNE32_20800 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase JNE32_20805 PF00535 Glycosyl transferase family 2 JNE32_20810 PF09671 Spore coat protein (Spore_GerQ) JNE32_20815 PF04241 Protein of unknown function (DUF423) JNE32_20820 PF00860 Permease family JNE32_20825 PF17261 Family of unknown function (DUF5327) JNE32_20830 PF00171 Aldehyde dehydrogenase family JNE32_20835 PF03167 Uracil DNA glycosylase superfamily JNE32_20840 PF00535 Glycosyl transferase family 2 JNE32_20845 PF08543 Phosphomethylpyrimidine kinase JNE32_20855 PF00251 Glycosyl hydrolases family 32 N-terminal domain JNE32_20855 PF08244 Glycosyl hydrolases family 32 C terminal JNE32_20860 PF00367 phosphotransferase system, EIIB JNE32_20860 PF02378 Phosphotransferase system, EIIC JNE32_20865 PF01226 Formate/nitrite transporter JNE32_20870 PF00874 PRD domain JNE32_20870 PF03123 CAT RNA binding domain JNE32_20880 PF00082 Subtilase family JNE32_20880 PF02225 PA domain JNE32_20880 PF05922 Peptidase inhibitor I9 JNE32_20880 PF13860 FlgD Ig-like domain JNE32_20885 PF00296 Luciferase-like monooxygenase JNE32_20890 PF00881 Nitroreductase family JNE32_20895 PF01098 Cell cycle protein JNE32_20900 PF17368 Spore morphogenesis and germination YwcE JNE32_20905 PF03626 Prokaryotic Cytochrome C oxidase subunit IV JNE32_20910 PF00510 Cytochrome c oxidase subunit III JNE32_20915 PF00115 Cytochrome C and Quinol oxidase polypeptide I JNE32_20920 PF00116 Cytochrome C oxidase subunit II, periplasmic domain JNE32_20920 PF02790 Cytochrome C oxidase subunit II, transmembrane domain JNE32_20925 PF04226 Transglycosylase associated protein JNE32_20930 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain JNE32_20930 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain JNE32_20935 PF00288 GHMP kinases N terminal domain JNE32_20935 PF10509 Galactokinase galactose-binding signature JNE32_20935 PF08544 GHMP kinases C terminal JNE32_20940 PF04138 GtrA-like protein JNE32_20945 PF00440 Bacterial regulatory proteins, tetR family JNE32_20950 PF08671 Anti-repressor SinI JNE32_20955 PF04341 Protein of unknown function, DUF485 JNE32_20960 PF00474 Sodium:solute symporter family JNE32_20965 PF01323 DSBA-like thioredoxin domain JNE32_20970 PF10518 TAT (twin-arginine translocation) pathway signal sequence JNE32_20970 PF04261 Dyp-type peroxidase family JNE32_20975 PF09375 Imelysin JNE32_20980 PF03239 Iron permease FTR1 family JNE32_20985 PF02581 Thiamine monophosphate synthase JNE32_20990 PF02110 Hydroxyethylthiazole kinase family JNE32_20995 PF03466 LysR substrate binding domain JNE32_20995 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JNE32_21000 PF03788 LrgA family JNE32_21005 PF04172 LrgB-like family JNE32_21010 PF12832 MFS_1 like family JNE32_21015 PF09962 Uncharacterized conserved protein (DUF2196) JNE32_21020 PF10672 S-adenosylmethionine-dependent methyltransferase JNE32_21020 PF17785 PUA-like domain JNE32_21025 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily JNE32_21030 PF02378 Phosphotransferase system, EIIC JNE32_21035 PF00082 Subtilase family JNE32_21040 PF00367 phosphotransferase system, EIIB JNE32_21040 PF02378 Phosphotransferase system, EIIC JNE32_21045 PF00874 PRD domain JNE32_21045 PF03123 CAT RNA binding domain JNE32_21050 PF01501 Glycosyl transferase family 8 JNE32_21055 PF09529 Integral membrane protein (intg_mem_TP0381) JNE32_21060 PF01047 MarR family JNE32_21065 PF01479 S4 domain JNE32_21065 PF00579 tRNA synthetases class I (W and Y) JNE32_21070 PF02225 PA domain JNE32_21070 PF04389 Peptidase family M28 JNE32_21090 PF04607 Region found in RelA / SpoT proteins JNE32_21095 PF01040 UbiA prenyltransferase family JNE32_21105 PF12459 D-Ala-teichoic acid biosynthesis protein JNE32_21110 PF00501 AMP-binding enzyme JNE32_21110 PF13193 AMP-binding enzyme C-terminal domain JNE32_21115 PF03062 MBOAT, membrane-bound O-acyltransferase family JNE32_21120 PF00550 Phosphopantetheine attachment site JNE32_21125 PF04914 DltD protein JNE32_21130 PF00106 short chain dehydrogenase JNE32_21135 PF01063 Amino-transferase class IV JNE32_21140 PF11975 Family 4 glycosyl hydrolase C-terminal domain JNE32_21140 PF02056 Family 4 glycosyl hydrolase JNE32_21145 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit JNE32_21150 PF02378 Phosphotransferase system, EIIC JNE32_21155 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit JNE32_21160 PF08279 HTH domain JNE32_21160 PF00874 PRD domain JNE32_21160 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 JNE32_21160 PF05043 Mga helix-turn-helix domain JNE32_21170 PF02245 Methylpurine-DNA glycosylase (MPG) JNE32_21175 PF00199 Catalase JNE32_21175 PF06628 Catalase-related immune-responsive JNE32_21185 PF12679 ABC-2 family transporter protein JNE32_21190 PF13732 Domain of unknown function (DUF4162) JNE32_21190 PF00005 ABC transporter JNE32_21195 PF13396 Phospholipase_D-nuclease N-terminal JNE32_21205 PF17280 Family of unknown function (DUF5345) JNE32_21210 PF04542 Sigma-70 region 2 JNE32_21210 PF08281 Sigma-70, region 4 JNE32_21215 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin JNE32_21220 PF01256 Carbohydrate kinase JNE32_21225 PF00005 ABC transporter JNE32_21225 PF00664 ABC transporter transmembrane region JNE32_21230 PF00005 ABC transporter JNE32_21230 PF00664 ABC transporter transmembrane region JNE32_21235 PF02322 Cytochrome bd terminal oxidase subunit II JNE32_21240 PF01654 Cytochrome bd terminal oxidase subunit I JNE32_21245 PF03390 2-hydroxycarboxylate transporter family JNE32_21250 PF01435 Peptidase family M48 JNE32_21260 PF01522 Polysaccharide deacetylase JNE32_21265 PF03459 TOBE domain JNE32_21265 PF00005 ABC transporter JNE32_21265 PF17912 MalK OB fold domain JNE32_21270 PF13556 PucR C-terminal helix-turn-helix domain JNE32_21275 PF00171 Aldehyde dehydrogenase family JNE32_21280 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 JNE32_21280 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) JNE32_21285 PF11611 Domain of unknown function (DUF4352) JNE32_21290 PF16363 GDP-mannose 4,6 dehydratase JNE32_21295 PF01161 Phosphatidylethanolamine-binding protein JNE32_21300 PF03466 LysR substrate binding domain JNE32_21300 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JNE32_21310 PF07730 Histidine kinase JNE32_21315 PF00072 Response regulator receiver domain JNE32_21315 PF00196 Bacterial regulatory proteins, luxR family JNE32_21320 PF07687 Peptidase dimerisation domain JNE32_21320 PF01546 Peptidase family M20/M25/M40 JNE32_21330 PF04525 LURP-one-related JNE32_21335 PF01717 Cobalamin-independent synthase, Catalytic domain JNE32_21340 PF01717 Cobalamin-independent synthase, Catalytic domain JNE32_21350 PF01144 Coenzyme A transferase JNE32_21355 PF01144 Coenzyme A transferase JNE32_21365 PF08241 Methyltransferase domain JNE32_21370 PF01773 Na+ dependent nucleoside transporter N-terminus JNE32_21370 PF07662 Na+ dependent nucleoside transporter C-terminus JNE32_21385 PF06628 Catalase-related immune-responsive JNE32_21385 PF00199 Catalase JNE32_21385 PF18011 C-terminal domain found in long catalases JNE32_21390 PF03600 Citrate transporter JNE32_21395 PF00722 Glycosyl hydrolases family 16 JNE32_21400 PF00874 PRD domain JNE32_21400 PF03123 CAT RNA binding domain JNE32_21410 PF11700 Vacuole effluxer Atg22 like JNE32_21415 PF00271 Helicase conserved C-terminal domain JNE32_21415 PF00270 DEAD/DEAH box helicase JNE32_21415 PF03880 DbpA RNA binding domain JNE32_21420 PF13472 GDSL-like Lipase/Acylhydrolase family JNE32_21435 PF14176 YxiJ-like protein JNE32_21440 PF10898 Protein of unknown function (DUF2716) JNE32_21470 PF05593 RHS Repeat JNE32_21475 PF00892 EamA-like transporter family JNE32_21480 PF13411 MerR HTH family regulatory protein JNE32_21495 PF17418 Sporulation delaying protein SdpA JNE32_21500 PF00582 Universal stress protein family JNE32_21505 PF00232 Glycosyl hydrolase family 1 JNE32_21510 PF02378 Phosphotransferase system, EIIC JNE32_21510 PF00367 phosphotransferase system, EIIB JNE32_21510 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 JNE32_21515 PF18593 CdiI immunity protein JNE32_21555 PF16888 Domain of unknown function (DUF5082) JNE32_21560 PF16369 C-terminal lipocalin-like domain JNE32_21560 PF04616 Glycosyl hydrolases family 43 JNE32_21570 PF09021 HutP JNE32_21575 PF00221 Aromatic amino acid lyase JNE32_21580 PF17391 Urocanase N-terminal domain JNE32_21580 PF17392 Urocanase C-terminal domain JNE32_21580 PF01175 Urocanase Rossmann-like domain JNE32_21585 PF01979 Amidohydrolase family JNE32_21590 PF00491 Arginase family JNE32_21595 PF00324 Amino acid permease JNE32_21600 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain JNE32_21600 PF00591 Glycosyl transferase family, a/b domain JNE32_21600 PF02885 Glycosyl transferase family, helical bundle domain JNE32_21605 PF07662 Na+ dependent nucleoside transporter C-terminus JNE32_21605 PF01773 Na+ dependent nucleoside transporter N-terminus JNE32_21610 PF01791 DeoC/LacD family aldolase JNE32_21615 PF04198 Putative sugar-binding domain JNE32_21620 PF06724 Domain of Unknown Function (DUF1206) JNE32_21625 PF04346 Ethanolamine utilisation protein, EutH JNE32_21635 PF01546 Peptidase family M20/M25/M40 JNE32_21635 PF07687 Peptidase dimerisation domain JNE32_21640 PF00005 ABC transporter JNE32_21645 PF00528 Binding-protein-dependent transport system inner membrane component JNE32_21650 PF00497 Bacterial extracellular solute-binding proteins, family 3 JNE32_21655 PF00583 Acetyltransferase (GNAT) family JNE32_21660 PF00296 Luciferase-like monooxygenase JNE32_21670 PF02275 Linear amide C-N hydrolases, choloylglycine hydrolase family JNE32_21685 PF11631 Protein of unknown function (DUF3255) JNE32_21705 PF01497 Periplasmic binding protein JNE32_21710 PF06486 Protein of unknown function (DUF1093) JNE32_21715 PF02687 FtsX-like permease family JNE32_21720 PF00005 ABC transporter JNE32_21725 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JNE32_21730 PF00072 Response regulator receiver domain JNE32_21730 PF00486 Transcriptional regulatory protein, C terminal JNE32_21735 PF01116 Fructose-bisphosphate aldolase class-II JNE32_21740 PF01261 Xylose isomerase-like TIM barrel JNE32_21745 PF01261 Xylose isomerase-like TIM barrel JNE32_21750 PF01408 Oxidoreductase family, NAD-binding Rossmann fold JNE32_21750 PF02894 Oxidoreductase family, C-terminal alpha/beta domain JNE32_21755 PF07690 Major Facilitator Superfamily JNE32_21760 PF01261 Xylose isomerase-like TIM barrel JNE32_21765 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain JNE32_21765 PF00205 Thiamine pyrophosphate enzyme, central domain JNE32_21765 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain JNE32_21770 PF00294 pfkB family carbohydrate kinase JNE32_21775 PF04962 KduI/IolB family JNE32_21780 PF00171 Aldehyde dehydrogenase family JNE32_21785 PF08220 DeoR-like helix-turn-helix domain JNE32_21785 PF00455 DeoR C terminal sensor domain JNE32_21790 PF00248 Aldo/keto reductase family JNE32_21800 PF10850 Protein of unknown function (DUF2653) JNE32_21805 PF00083 Sugar (and other) transporter JNE32_21810 PF00183 Hsp90 protein JNE32_21825 PF00440 Bacterial regulatory proteins, tetR family JNE32_21830 PF00171 Aldehyde dehydrogenase family JNE32_21840 PF01011 PQQ enzyme repeat JNE32_21840 PF13570 PQQ-like domain JNE32_21840 PF13360 PQQ-like domain JNE32_21845 PF17369 Family of unknown function (DUF5391) JNE32_21850 PF06271 RDD family JNE32_21855 PF04235 Protein of unknown function (DUF418) JNE32_21860 PF07883 Cupin domain JNE32_21865 PF00440 Bacterial regulatory proteins, tetR family JNE32_21870 PF00106 short chain dehydrogenase JNE32_21875 PF01047 MarR family JNE32_21880 PF03788 LrgA family JNE32_21885 PF04172 LrgB-like family JNE32_21890 PF04230 Polysaccharide pyruvyl transferase JNE32_21895 PF02595 Glycerate kinase family JNE32_21900 PF00392 Bacterial regulatory proteins, gntR family JNE32_21900 PF07729 FCD domain JNE32_21905 PF00370 FGGY family of carbohydrate kinases, N-terminal domain JNE32_21905 PF02782 FGGY family of carbohydrate kinases, C-terminal domain JNE32_21910 PF02447 GntP family permease JNE32_21915 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase JNE32_21915 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain JNE32_21925 PF00578 AhpC/TSA family JNE32_21930 PF13192 Thioredoxin domain JNE32_21930 PF07992 Pyridine nucleotide-disulphide oxidoreductase JNE32_21940 PF00232 Glycosyl hydrolase family 1 JNE32_21950 PF07702 UTRA domain JNE32_21950 PF00392 Bacterial regulatory proteins, gntR family JNE32_21960 PF06874 Firmicute fructose-1,6-bisphosphatase JNE32_21980 PF04851 Type III restriction enzyme, res subunit JNE32_21995 PF14116 YyzF-like protein JNE32_22005 PF00107 Zinc-binding dehydrogenase JNE32_22005 PF08240 Alcohol dehydrogenase GroES-like domain JNE32_22015 PF10852 Protein of unknown function (DUF2651) JNE32_22030 PF00583 Acetyltransferase (GNAT) family JNE32_22035 PF18801 response regulator aspartate phosphatase H, N terminal JNE32_22045 PF00491 Arginase family JNE32_22050 PF00324 Amino acid permease JNE32_22055 PF00202 Aminotransferase class-III JNE32_22060 PF02954 Bacterial regulatory protein, Fis family JNE32_22060 PF13426 PAS domain JNE32_22060 PF00158 Sigma-54 interaction domain JNE32_22065 PF00989 PAS fold JNE32_22065 PF16736 Single Cache-like JNE32_22065 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JNE32_22065 PF00512 His Kinase A (phospho-acceptor) domain JNE32_22070 PF00072 Response regulator receiver domain JNE32_22070 PF00486 Transcriptional regulatory protein, C terminal JNE32_22090 PF13180 PDZ domain JNE32_22095 PF00753 Metallo-beta-lactamase superfamily JNE32_22100 PF09648 YycH protein JNE32_22105 PF07435 YycH protein JNE32_22110 PF13426 PAS domain JNE32_22110 PF00512 His Kinase A (phospho-acceptor) domain JNE32_22110 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JNE32_22110 PF00672 HAMP domain JNE32_22115 PF00486 Transcriptional regulatory protein, C terminal JNE32_22115 PF00072 Response regulator receiver domain JNE32_22140 PF00709 Adenylosuccinate synthetase JNE32_22145 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily JNE32_22150 PF03796 DnaB-like helicase C terminal domain JNE32_22150 PF00772 DnaB-like helicase N terminal domain JNE32_22155 PF09954 Uncharacterized protein conserved in bacteria (DUF2188) JNE32_22165 PF14174 YycC-like protein JNE32_22170 PF07690 Major Facilitator Superfamily JNE32_22175 PF13231 Dolichyl-phosphate-mannose-protein mannosyltransferase JNE32_22180 PF03948 Ribosomal protein L9, C-terminal domain JNE32_22180 PF01281 Ribosomal protein L9, N-terminal domain JNE32_22185 PF01368 DHH family JNE32_22185 PF02272 DHHA1 domain JNE32_22190 PF09991 Predicted membrane protein (DUF2232) JNE32_22200 PF07875 Coat F domain JNE32_22205 PF01638 HxlR-like helix-turn-helix JNE32_22210 PF02833 DHHA2 domain JNE32_22210 PF01368 DHH family JNE32_22225 PF07690 Major Facilitator Superfamily JNE32_22230 PF13411 MerR HTH family regulatory protein JNE32_22230 PF06445 GyrI-like small molecule binding domain JNE32_22240 PF13474 SnoaL-like domain JNE32_22245 PF00805 Pentapeptide repeats (8 copies) JNE32_22250 PF07690 Major Facilitator Superfamily JNE32_22255 PF03466 LysR substrate binding domain JNE32_22255 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JNE32_22260 PF13673 Acetyltransferase (GNAT) domain JNE32_22270 PF00753 Metallo-beta-lactamase superfamily JNE32_22275 PF01047 MarR family JNE32_22280 PF13673 Acetyltransferase (GNAT) domain JNE32_22290 PF00583 Acetyltransferase (GNAT) family JNE32_22295 PF04237 YjbR JNE32_22300 PF01872 RibD C-terminal domain JNE32_22310 PF07690 Major Facilitator Superfamily JNE32_22315 PF08050 Tetracycline resistance leader peptide JNE32_22320 PF03190 Protein of unknown function, DUF255 JNE32_22325 PF02517 CPBP intramembrane metalloprotease JNE32_22330 PF00083 Sugar (and other) transporter JNE32_22335 PF14602 Hexapeptide repeat of succinyl-transferase JNE32_22335 PF12464 Maltose acetyltransferase JNE32_22340 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily JNE32_22345 PF00356 Bacterial regulatory proteins, lacI family JNE32_22345 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family JNE32_22350 PF03372 Endonuclease/Exonuclease/phosphatase family JNE32_22355 PF01084 Ribosomal protein S18 JNE32_22360 PF00436 Single-strand binding protein family JNE32_22365 PF01250 Ribosomal protein S6 JNE32_22370 PF06071 Protein of unknown function (DUF933) JNE32_22370 PF01926 50S ribosome-binding GTPase JNE32_22375 PF04879 Molybdopterin oxidoreductase Fe4S4 domain JNE32_22375 PF00384 Molybdopterin oxidoreductase JNE32_22375 PF01568 Molydopterin dinucleotide binding domain JNE32_22380 PF06107 Bacterial protein of unknown function (DUF951) JNE32_22390 PF06866 Protein of unknown function (DUF1256) JNE32_22395 PF17762 HTH domain found in ParB protein JNE32_22395 PF02195 ParB-like nuclease domain JNE32_22400 PF13614 AAA domain JNE32_22405 PF06713 Bacterial PH domain JNE32_22410 PF02195 ParB-like nuclease domain JNE32_22410 PF17762 HTH domain found in ParB protein JNE32_22415 PF02527 rRNA small subunit methyltransferase G JNE32_22420 PF01134 Glucose inhibited division protein A JNE32_22420 PF13932 GidA associated domain JNE32_22425 PF01926 50S ribosome-binding GTPase JNE32_22425 PF12631 MnmE helical domain JNE32_22425 PF10396 GTP-binding protein TrmE N-terminus JNE32_22430 PF01424 R3H domain JNE32_22430 PF14804 Jag N-terminus JNE32_22435 PF02096 60Kd inner membrane protein JNE32_22440 PF00825 Ribonuclease P JNE32_22445 PF00468 Ribosomal protein L34