locus-tag	class	description
JNE32_00005	COG0593	it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids
JNE32_00010	COG0592	DNA-directed DNA polymerase activity
JNE32_00015	COG2501	S4 domain
JNE32_00020	COG1195	it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
JNE32_00030	COG0187	DNA topoisomerase II activity
JNE32_00035	COG0188	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
JNE32_00070	COG0516	GMP reductase activity
JNE32_00070	COG0517	IMP dehydrogenase activity
JNE32_00075	COG1686	Belongs to the peptidase S11 family
JNE32_00080	COG0214	Catalyzes the formation of pyridoxal 5'-phosphate from ribose 5-phosphate (RBP), glyceraldehyde 3-phosphate (G3P) and ammonia. The ammonia is provided by the PdxT subunit. Can also use ribulose 5-phosphate and dihydroxyacetone phosphate as substrates, resulting from enzyme-catalyzed isomerization of RBP and G3P, respectively
JNE32_00085	COG0311	Catalyzes the hydrolysis of glutamine to glutamate and ammonia as part of the biosynthesis of pyridoxal 5'-phosphate. The resulting ammonia molecule is channeled to the active site of PdxS
JNE32_00090	COG0172	Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec)
JNE32_00100	COG1428	Deoxynucleoside kinase
JNE32_00105	COG1428	Deoxynucleoside kinase
JNE32_00110	COG1388	LysM domain
JNE32_00110	COG3858	chitin binding
JNE32_00115	COG1335	isochorismatase
JNE32_00120	COG0590	tRNA wobble adenosine to inosine editing
JNE32_00130	COG2812	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
JNE32_00135	COG0718	Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection
JNE32_00140	COG0353	May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO
JNE32_00185	COG4915	5-bromo-4-chloroindolyl phosphate hydrolysis protein
JNE32_00190	COG3853	Toxic anion resistance protein (TelA)
JNE32_00195	COG1982	Orn Lys Arg decarboxylase major
JNE32_00200	COG0125	Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
JNE32_00205	COG3870	Protein conserved in bacteria
JNE32_00210	COG1728	Protein conserved in bacteria
JNE32_00215	COG0470	DNA polymerase III
JNE32_00220	COG1774	PSP1 C-terminal conserved region
JNE32_00225	COG4467	Involved in initiation control of chromosome replication
JNE32_00230	COG4123	Specifically methylates the adenine in position 37 of tRNA(1)(Val) (anticodon cmo5UAC)
JNE32_00235	COG2827	Endonuclease containing a URI domain
JNE32_00240	COG0313	Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
JNE32_00245	COG2002	toxin-antitoxin pair type II binding
JNE32_00250	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
JNE32_00250	COG0143	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
JNE32_00255	COG0084	hydrolase, TatD family'
JNE32_00260	COG3583	domain protein
JNE32_00260	COG3584	3D domain protein
JNE32_00265	COG1658	Required for correct processing of both the 5' and 3' ends of 5S rRNA precursor. Cleaves both sides of a double-stranded region yielding mature 5S rRNA in one step
JNE32_00270	COG0030	16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase activity
JNE32_00280	COG4466	Protein conserved in bacteria
JNE32_00290	COG1947	Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol
JNE32_00295	COG0503	Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
JNE32_00300	COG0251	oxidation-reduction process
JNE32_00305	COG2088	sporulation resulting in formation of a cellular spore
JNE32_00310	COG1207	Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain
JNE32_00315	COG0462	Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
JNE32_00320	COG1825	This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance
JNE32_00325	COG0193	aminoacyl-tRNA hydrolase activity
JNE32_00335	COG1197	Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
JNE32_00340	COG2002	toxin-antitoxin pair type II binding
JNE32_00345	COG2244	polysaccharide biosynthetic process
JNE32_00350	COG3956	TIGRFAM MazG family protein
JNE32_00355	COG1188	Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit, (S4 paralog))
JNE32_00370	COG2919	Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic
JNE32_00375	COG1098	S1 RNA binding domain
JNE32_00390	COG2208	phosphoserine phosphatase activity
JNE32_00395	COG2304	oxidoreductase activity
JNE32_00400	COG0515	serine threonine protein kinase
JNE32_00405	COG0037	tRNA processing
JNE32_00410	COG0634	Belongs to the purine pyrimidine phosphoribosyltransferase family
JNE32_00415	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
JNE32_00420	COG1521	Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis
JNE32_00425	COG1281	Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress
JNE32_00430	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
JNE32_00435	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
JNE32_00440	COG0147	Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
JNE32_00445	COG0512	Glutamine amidotransferase of anthranilate synthase
JNE32_00450	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
JNE32_00455	COG0294	Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives
JNE32_00460	COG1539	Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin
JNE32_00465	COG0801	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
JNE32_00470	COG1396	sequence-specific DNA binding
JNE32_00475	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
JNE32_00480	COG1190	Belongs to the class-II aminoacyl-tRNA synthetase family
JNE32_00560	COG4463	regulation of RNA biosynthetic process
JNE32_00565	COG3880	PFAM UvrB UvrC protein
JNE32_00570	COG3869	Catalyzes the specific phosphorylation of arginine residues in
JNE32_00575	COG0542	response to heat
JNE32_00580	COG1066	DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function
JNE32_00585	COG1623	Has also diadenylate cyclase activity, catalyzing the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP). c- di-AMP acts as a signaling molecule that couples DNA integrity with progression of sporulation. The rise in c-di-AMP level generated by DisA while scanning the chromosome, operates as a positive signal that advances sporulation
JNE32_00590	COG4956	integral membrane protein (PIN domain superfamily)
JNE32_00595	COG1211	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity
JNE32_00600	COG0245	2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase activity
JNE32_00605	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
JNE32_00610	COG1045	serine acetyltransferase
JNE32_00615	COG0215	cysteine-tRNA ligase activity
JNE32_00620	COG1939	Involved in correct processing of both the 5' and 3' ends of 23S rRNA precursor. Processes 30S rRNA precursor transcript even in absence of ribonuclease 3 (Rnc)
JNE32_00625	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
JNE32_00630	COG3688	RNA-binding protein containing a PIN domain
JNE32_00635	COG1595	DNA-templated transcription, initiation
JNE32_00645	COG0690	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
JNE32_00650	COG0250	Participates in transcription elongation, termination and antitermination
JNE32_00660	COG0081	regulation of translation
JNE32_00665	COG0244	Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors
JNE32_00675	COG2813	Specifically methylates the guanine in position
JNE32_00680	COG0085	RNA polymerase activity
JNE32_00685	COG0086	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
JNE32_00690	COG1358	cellular component organization or biogenesis
JNE32_00695	COG0048	Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit
JNE32_00700	COG0049	tRNA binding
JNE32_00705	COG0480	Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
JNE32_00710	COG0050	This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
JNE32_00715	COG0596	Alpha beta hydrolase
JNE32_00725	COG0087	One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit
JNE32_00730	COG0088	Forms part of the polypeptide exit tunnel
JNE32_00740	COG0090	One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity
JNE32_00760	COG0197	Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs
JNE32_00770	COG0186	One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA
JNE32_00775	COG0093	Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome
JNE32_00785	COG0094	This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits
JNE32_00795	COG0096	One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit
JNE32_00800	COG0097	This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center
JNE32_00805	COG0256	This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance
JNE32_00810	COG0098	Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body
JNE32_00820	COG0200	Binds to the 23S rRNA
JNE32_00825	COG0201	protein transport
JNE32_00830	COG0563	adenylate kinase activity
JNE32_00835	COG0024	Methionine aminopeptidase
JNE32_00850	COG0257	Belongs to the bacterial ribosomal protein bL36 family
JNE32_00855	COG0099	Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits
JNE32_00860	COG0100	Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome
JNE32_00865	COG0202	RNA polymerase activity
JNE32_00870	COG0203	ribosomal protein L17
JNE32_00875	COG1122	ATPase activity
JNE32_00880	COG1122	ATPase activity
JNE32_00885	COG0619	Transmembrane (T) component of an energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
JNE32_00890	COG0101	tRNA pseudouridine synthase activity
JNE32_00895	COG0102	This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly
JNE32_00900	COG0103	maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
JNE32_00905	COG2226	methyltransferase
JNE32_00915	COG0860	N-Acetylmuramoyl-L-alanine amidase
JNE32_00920	COG0489	protein tyrosine kinase activity
JNE32_00930	COG2194	sulfuric ester hydrolase activity
JNE32_00935	COG0726	polysaccharide deacetylase
JNE32_01020	COG0659	secondary active sulfate transmembrane transporter activity
JNE32_01025	COG0385	Bile acid
JNE32_01030	COG2819	hydrolase of the alpha beta superfamily
JNE32_01035	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
JNE32_01040	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
JNE32_01045	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
JNE32_01050	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
JNE32_01050	COG2207	Transcriptional regulator
JNE32_01055	COG3876	Protein conserved in bacteria
JNE32_01060	COG1472	Belongs to the glycosyl hydrolase 3 family
JNE32_01065	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
JNE32_01070	COG1263	PTS System
JNE32_01070	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
JNE32_01075	COG1737	Transcriptional regulator
JNE32_01080	COG2103	Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6- phosphate and D-lactate
JNE32_01085	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
JNE32_01090	COG1683	Conserved Protein
JNE32_01120	COG1595	DNA-templated transcription, initiation
JNE32_01125	COG5662	AntiSigma factor
JNE32_01130	COG1624	Catalyzes the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria
JNE32_01135	COG4856	YbbR-like protein
JNE32_01140	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
JNE32_01145	COG0449	glutamine-fructose-6-phosphate transaminase (isomerizing) activity
JNE32_01155	COG0122	3-methyladenine DNA glycosylase 8-oxoguanine DNA glycosylase
JNE32_01160	COG2169	Transcriptional regulator
JNE32_01165	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
JNE32_01170	COG1009	NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit
JNE32_01175	COG3002	Belongs to the UPF0753 family
JNE32_01180	COG0288	reversible hydration of carbon dioxide
JNE32_01190	COG5609	conserved protein (DUF2294)
JNE32_01195	COG0640	Transcriptional regulator
JNE32_01200	COG2814	Major facilitator Superfamily
JNE32_01215	COG1404	Belongs to the peptidase S8 family
JNE32_01235	COG1132	(ABC) transporter
JNE32_01240	COG0596	Alpha beta hydrolase
JNE32_01245	COG0745	RESPONSE REGULATOR receiver
JNE32_01250	COG0642	Histidine kinase
JNE32_01260	COG0515	serine threonine protein kinase
JNE32_01275	COG1113	amino acid transport
JNE32_01290	COG2602	Beta-lactamase
JNE32_01295	COG2124	cytochrome p450
JNE32_01305	COG0531	amino acid
JNE32_01310	COG0584	glycerophosphoryl diester phosphodiesterase
JNE32_01315	COG2271	Major facilitator Superfamily
JNE32_01325	COG0456	acetyltransferase
JNE32_01325	COG1846	Transcriptional regulator
JNE32_01330	COG2271	Major facilitator Superfamily
JNE32_01340	COG3409	Peptidoglycan-binding domain 1 protein
JNE32_01345	COG0697	spore germination
JNE32_01350	COG2207	Transcriptional regulator
JNE32_01350	COG1917	Cupin 2, conserved barrel domain protein
JNE32_01355	COG0027	Involved in the de novo purine biosynthesis. Catalyzes the transfer of formate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR). Formate is provided by PurU via hydrolysis of 10-formyl-tetrahydrofolate
JNE32_01360	COG3591	Belongs to the peptidase S1B family
JNE32_01370	COG0596	Alpha beta hydrolase
JNE32_01375	COG1183	phosphatidylcholine synthase activity
JNE32_01380	COG0586	Pfam SNARE associated Golgi protein
JNE32_01385	COG0688	phosphatidylethanolamine metabolic process
JNE32_01395	COG1054	Belongs to the UPF0176 family
JNE32_01400	COG1301	dicarboxylic acid transport
JNE32_01405	COG2190	(PTS) system
JNE32_01405	COG1263	PTS System
JNE32_01405	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
JNE32_01410	COG0363	glucosamine-6-phosphate deaminase activity
JNE32_01415	COG2188	Transcriptional regulator
JNE32_01425	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
JNE32_01430	COG0833	amino acid
JNE32_01435	COG2040	homocysteine
JNE32_01440	COG1115	amino acid carrier protein
JNE32_01445	COG2066	Belongs to the glutaminase family
JNE32_01450	COG4191	Histidine kinase
JNE32_01455	COG0784	Response regulator, receiver
JNE32_01460	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
JNE32_01465	COG1012	belongs to the aldehyde dehydrogenase family
JNE32_01470	COG2271	Major facilitator Superfamily
JNE32_01475	COG4948	Mandelate Racemase Muconate Lactonizing
JNE32_01480	COG2186	Transcriptional regulator
JNE32_01485	COG2721	sulfolactate sulfo-lyase activity
JNE32_01490	COG3173	Aminoglycoside phosphotransferase
JNE32_01500	COG0697	spore germination
JNE32_01505	COG0745	RESPONSE REGULATOR receiver
JNE32_01510	COG2205	protein histidine kinase activity
JNE32_01515	COG1131	(ABC) transporter
JNE32_01535	COG3773	Cell wall hydrolase
JNE32_01540	COG2304	oxidoreductase activity
JNE32_01550	COG3540	Alkaline phosphatase
JNE32_01555	COG1826	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
JNE32_01560	COG0805	protein transport
JNE32_01565	COG2039	Removes 5-oxoproline from various penultimate amino acid residues except L-proline
JNE32_01570	COG0520	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
JNE32_01575	COG0477	Major facilitator Superfamily
JNE32_01580	COG1309	transcriptional regulator
JNE32_01585	COG0252	asparaginase activity
JNE32_01590	COG1075	acetyltransferases and hydrolases with the alpha beta hydrolase fold
JNE32_01595	COG1714	RDD family
JNE32_01600	COG1405	negative regulation of cell septum assembly
JNE32_01600	COG3012	SEC-C Motif Domain Protein
JNE32_01605	COG3290	protein histidine kinase activity
JNE32_01610	COG3279	Response regulator of the LytR AlgR family
JNE32_01615	COG4555	ABC transporter
JNE32_01620	COG1668	transmembrane transport
JNE32_01625	COG0667	Aldo Keto reductase
JNE32_01640	COG1595	DNA-templated transcription, initiation
JNE32_01645	COG1595	DNA-templated transcription, initiation
JNE32_01650	COG1876	peptidase activity
JNE32_01655	COG0457	Tetratricopeptide repeat
JNE32_01660	COG1028	Short-chain dehydrogenase reductase Sdr
JNE32_01665	COG0366	Alpha amylase catalytic
JNE32_01670	COG0803	Belongs to the bacterial solute-binding protein 9 family
JNE32_01675	COG1121	(ABC) transporter
JNE32_01680	COG1108	ABC-type Mn2 Zn2 transport systems permease components
JNE32_01685	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
JNE32_01690	COG2310	stress, protein
JNE32_01695	COG2310	stress, protein
JNE32_01700	COG2310	stress, protein
JNE32_01705	COG0861	Integral membrane protein TerC family
JNE32_01715	COG3853	Toxic anion resistance protein (TelA)
JNE32_01720	COG0477	Major facilitator Superfamily
JNE32_01725	COG2814	Major facilitator Superfamily
JNE32_01730	COG0640	Transcriptional regulator
JNE32_01735	COG0517	IMP dehydrogenase activity
JNE32_01735	COG4175	Glycine betaine
JNE32_01740	COG4176	ABC-type proline glycine betaine transport system permease component
JNE32_01745	COG2113	Glycine betaine
JNE32_01750	COG1473	amidohydrolase
JNE32_01755	COG1288	antiporter activity
JNE32_01765	COG0366	Alpha amylase catalytic
JNE32_01770	COG0039	L-malate dehydrogenase activity
JNE32_01775	COG1620	l-lactate permease
JNE32_01780	COG2814	Major facilitator Superfamily
JNE32_01785	COG1846	Transcriptional regulator
JNE32_01790	COG1280	lysine exporter protein (LysE YggA)
JNE32_01795	COG3403	YqcI/YcgG family
JNE32_01800	COG1113	amino acid transport
JNE32_01805	COG3665	Urea carboxylase-associated protein
JNE32_01810	COG0171	NAD+ synthase (glutamine-hydrolyzing) activity
JNE32_01815	COG1660	Displays ATPase and GTPase activities
JNE32_01820	COG0703	Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate
JNE32_01825	COG2226	methyltransferase
JNE32_01830	COG0583	DNA-binding transcription factor activity
JNE32_01835	COG3458	cephalosporin-C deacetylase activity
JNE32_01840	COG3541	Predicted nucleotidyltransferase
JNE32_01845	COG0506	proline dehydrogenase activity
JNE32_01850	COG1012	belongs to the aldehyde dehydrogenase family
JNE32_01855	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
JNE32_01860	COG2508	Transcriptional regulator
JNE32_01865	COG3689	TIGRFAM TIGR03943 family protein
JNE32_01870	COG0701	Predicted permease
JNE32_01875	COG2267	carboxylic ester hydrolase activity
JNE32_01880	COG0492	ferredoxin-NADP+ reductase activity
JNE32_01885	COG1587	Uroporphyrinogen-III synthase
JNE32_01885	COG0007	Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme
JNE32_01890	COG2146	nitrite reductase [NAD(P)H] activity
JNE32_01895	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
JNE32_01900	COG0243	molybdopterin cofactor binding
JNE32_01905	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
JNE32_01910	COG2223	nitrite transmembrane transporter activity
JNE32_01915	COG1469	GTP cyclohydrolase I activity
JNE32_01920	COG1376	ErfK ybiS ycfS ynhG family protein
JNE32_01935	COG0523	cobalamin synthesis protein
JNE32_01940	COG0765	amino acid transport
JNE32_01945	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
JNE32_01955	COG1714	RDD family
JNE32_01965	COG2723	6-phospho-beta-galactosidase activity
JNE32_01975	COG3209	COG3209 Rhs family protein
JNE32_01980	COG3290	protein histidine kinase activity
JNE32_01980	COG0840	transmembrane signaling receptor activity
JNE32_01985	COG0794	Belongs to the SIS family. GutQ KpsF subfamily
JNE32_01990	COG0269	3-dehydro-L-gulonate-6-phosphate decarboxylase activity
JNE32_01995	COG1733	regulation of RNA biosynthetic process
JNE32_02000	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
JNE32_02005	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
JNE32_02010	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
JNE32_02015	COG3208	Thioesterase involved in non-ribosomal peptide biosynthesis
JNE32_02020	COG2814	Major facilitator Superfamily
JNE32_02030	COG0697	spore germination
JNE32_02045	COG2364	Membrane
JNE32_02050	COG1126	abc transporter atp-binding protein
JNE32_02055	COG0765	amino acid transport
JNE32_02060	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
JNE32_02065	COG0583	DNA-binding transcription factor activity
JNE32_02070	COG0163	prenyltransferase activity
JNE32_02075	COG0043	3-octaprenyl-4-hydroxybenzoate carboxy-lyase activity
JNE32_02090	COG0596	Alpha beta hydrolase
JNE32_02095	COG3104	oligopeptide transport
JNE32_02100	COG5434	Belongs to the glycosyl hydrolase 28 family
JNE32_02110	COG0697	spore germination
JNE32_02120	COG1457	Belongs to the purine-cytosine permease (2.A.39) family
JNE32_02125	COG1136	(ABC) transporter
JNE32_02130	COG0577	efflux transmembrane transporter activity
JNE32_02135	COG0745	RESPONSE REGULATOR receiver
JNE32_02140	COG3850	Histidine kinase
JNE32_02140	COG5002	protein histidine kinase activity
JNE32_02145	COG0457	Tetratricopeptide repeat
JNE32_02165	COG0527	aspartate kinase activity
JNE32_02170	COG4606	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
JNE32_02175	COG4605	iron ion homeostasis
JNE32_02180	COG4604	ABC transporter, ATP-binding protein
JNE32_02185	COG4607	ABC-type enterochelin transport system periplasmic component
JNE32_02190	COG2814	Major facilitator Superfamily
JNE32_02195	COG1309	transcriptional regulator
JNE32_02200	COG0778	Nitroreductase
JNE32_02205	COG1359	(4S)-4-hydroxy-5-phosphonooxypentane-2,3-dione isomerase activity
JNE32_02210	COG0640	Transcriptional regulator
JNE32_02215	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
JNE32_02220	COG0160	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
JNE32_02225	COG1012	belongs to the aldehyde dehydrogenase family
JNE32_02230	COG4975	Glucose uptake
JNE32_02235	COG1028	Short-chain dehydrogenase reductase Sdr
JNE32_02240	COG4549	nuclear export factor GLE1
JNE32_02245	COG2372	response to copper ion
JNE32_02245	COG1276	copper resistance
JNE32_02250	COG1349	DNA-binding transcription factor activity
JNE32_02260	COG2213	PTS system mannitol-specific
JNE32_02265	COG4668	phosphoenolpyruvate-dependent sugar phosphotransferase system
JNE32_02270	COG0246	Mannitol dehydrogenase
JNE32_02275	COG0473	3-isopropylmalate dehydrogenase activity
JNE32_02280	COG0681	Belongs to the peptidase S26 family
JNE32_02285	COG0412	Dienelactone hydrolase
JNE32_02290	COG0764	3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity
JNE32_02300	COG0561	phosphatase activity
JNE32_02305	COG1540	5-oxoprolinase (ATP-hydrolyzing) activity
JNE32_02310	COG1914	H( )-stimulated, divalent metal cation uptake system
JNE32_02320	COG2049	5-oxoprolinase (ATP-hydrolyzing) activity
JNE32_02325	COG1984	allophanate hydrolase subunit 2
JNE32_02330	COG1414	Transcriptional regulator
JNE32_02335	COG2755	lipolytic protein G-D-S-L family
JNE32_02345	COG2329	Antibiotic biosynthesis monooxygenase
JNE32_02350	COG0768	penicillin binding
JNE32_02355	COG4989	oxidoreductase activity
JNE32_02365	COG0318	PFAM AMP-dependent synthetase and ligase
JNE32_02370	COG2226	methyltransferase
JNE32_02375	COG1028	Short-chain dehydrogenase reductase Sdr
JNE32_02380	COG1917	Cupin 2, conserved barrel domain protein
JNE32_02385	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
JNE32_02390	COG3871	stress protein (general stress protein 26)
JNE32_02400	COG2814	Major facilitator Superfamily
JNE32_02405	COG1522	sequence-specific DNA binding
JNE32_02410	COG0551	DNA topoisomerase type I activity
JNE32_02410	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
JNE32_02415	COG3405	Belongs to the glycosyl hydrolase 8 (cellulase D) family
JNE32_02420	COG3706	GGDEF domain
JNE32_02425	COG5298	Protein conserved in bacteria
JNE32_02430	COG1215	transferase activity, transferring glycosyl groups
JNE32_02440	COG0531	amino acid
JNE32_02445	COG0494	nUDIX hydrolase
JNE32_02450	COG0028	Belongs to the TPP enzyme family
JNE32_02465	COG1914	H( )-stimulated, divalent metal cation uptake system
JNE32_02470	COG2261	transglycosylase associated protein
JNE32_02475	COG4876	unkown
JNE32_02480	COG2217	Heavy metal translocating P-type atpase
JNE32_02485	COG3729	General stress protein
JNE32_02490	COG0662	Cupin 2, conserved barrel domain protein
JNE32_02495	COG2329	Antibiotic biosynthesis monooxygenase
JNE32_02500	COG3546	catalase activity
JNE32_02505	COG1638	TRAP-type C4-dicarboxylate transport system periplasmic component
JNE32_02510	COG3290	protein histidine kinase activity
JNE32_02515	COG4565	transcriptional regulatory protein
JNE32_02520	COG1301	dicarboxylic acid transport
JNE32_02525	COG0628	permease
JNE32_02535	COG1131	(ABC) transporter
JNE32_02540	COG1277	ABC-type transport system involved in multi-copper enzyme maturation permease component
JNE32_02550	COG1960	acyl-CoA dehydrogenase activity
JNE32_02565	COG0053	Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family
JNE32_02570	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
JNE32_02575	COG1181	Belongs to the D-alanine--D-alanine ligase family
JNE32_02580	COG0770	UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity
JNE32_02585	COG0513	Belongs to the DEAD box helicase family
JNE32_02590	COG3402	PFAM membrane-flanked domain
JNE32_02595	COG3428	Bacterial PH domain
JNE32_02600	COG0705	Rhomboid family
JNE32_02605	COG0736	holo-[acyl-carrier-protein] synthase activity
JNE32_02610	COG2834	Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane)
JNE32_02615	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
JNE32_02620	COG0864	Transcriptional regulator
JNE32_02625	COG2337	Toxic component of a toxin-antitoxin (TA) module
JNE32_02630	COG1366	Belongs to the anti-sigma-factor antagonist family
JNE32_02635	COG1366	Belongs to the anti-sigma-factor antagonist family
JNE32_02640	COG2172	sigma factor antagonist activity
JNE32_02645	COG2208	phosphoserine phosphatase activity
JNE32_02650	COG1366	Belongs to the anti-sigma-factor antagonist family
JNE32_02655	COG2172	sigma factor antagonist activity
JNE32_02660	COG1191	sigma factor activity
JNE32_02665	COG2208	phosphoserine phosphatase activity
JNE32_02670	COG2183	response to ionizing radiation
JNE32_02680	COG3091	SprT-like family
JNE32_02730	COG1476	TRANSCRIPTIONal
JNE32_02755	COG0693	protein deglycase activity
JNE32_02760	COG1278	Cold shock
JNE32_02765	COG1329	Transcriptional regulator
JNE32_02770	COG0697	spore germination
JNE32_02775	COG2207	Transcriptional regulator
JNE32_02775	COG1917	Cupin 2, conserved barrel domain protein
JNE32_02780	COG0697	spore germination
JNE32_02785	COG2207	Transcriptional regulator
JNE32_02785	COG3708	Transcriptional regulator
JNE32_02790	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
JNE32_02795	COG0477	Major facilitator Superfamily
JNE32_02805	COG4430	Bacteriocin-protection, YdeI or OmpD-Associated
JNE32_02820	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
JNE32_02825	COG1309	transcriptional regulator
JNE32_02830	COG0697	spore germination
JNE32_02835	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
JNE32_02840	COG2030	dehydratase
JNE32_02845	COG3545	Serine hydrolase
JNE32_02850	COG1733	regulation of RNA biosynthetic process
JNE32_02855	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
JNE32_02860	COG2814	Major facilitator Superfamily
JNE32_02865	COG1309	transcriptional regulator
JNE32_02875	COG0640	Transcriptional regulator
JNE32_02880	COG1055	Involved in arsenical resistance. Thought to form the channel of an arsenite pump
JNE32_02890	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
JNE32_02895	COG0697	spore germination
JNE32_02900	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
JNE32_02905	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
JNE32_02910	COG0640	Transcriptional regulator
JNE32_02915	COG2128	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
JNE32_02930	COG4585	Histidine kinase
JNE32_02935	COG2197	response regulator
JNE32_02940	COG2409	Drug exporters of the RND superfamily
JNE32_02945	COG0596	Alpha beta hydrolase
JNE32_02950	COG1811	Na channel or pump
JNE32_02955	COG4978	Transcriptional regulator
JNE32_02955	COG0789	Transcriptional regulator
JNE32_02960	COG0053	Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family
JNE32_02965	COG0778	Nitroreductase
JNE32_02970	COG0346	lactoylglutathione lyase activity
JNE32_02975	COG2259	Doxx family
JNE32_02980	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
JNE32_03000	COG2323	membrane
JNE32_03005	COG2323	membrane
JNE32_03010	COG0071	Belongs to the small heat shock protein (HSP20) family
JNE32_03025	COG1309	transcriptional regulator
JNE32_03035	COG0456	acetyltransferase
JNE32_03040	COG0488	(ABC) transporter
JNE32_03045	COG1113	amino acid transport
JNE32_03050	COG2318	DinB family
JNE32_03055	COG1846	Transcriptional regulator
JNE32_03060	COG1033	growth of symbiont in host cell
JNE32_03060	COG2409	Drug exporters of the RND superfamily
JNE32_03065	COG0778	Nitroreductase
JNE32_03070	COG1846	Transcriptional regulator
JNE32_03075	COG2814	Major facilitator Superfamily
JNE32_03080	COG0730	response to heat
JNE32_03085	COG1802	Transcriptional regulator
JNE32_03090	COG3858	chitin binding
JNE32_03090	COG1388	LysM domain
JNE32_03095	COG1819	glycosyl
JNE32_03105	COG1785	Belongs to the alkaline phosphatase family
JNE32_03110	COG5646	InterPro IPR014922
JNE32_03120	COG0454	-acetyltransferase
JNE32_03125	COG1078	dGTPase activity
JNE32_03130	COG1388	LysM domain
JNE32_03135	COG2814	Major facilitator Superfamily
JNE32_03140	COG1440	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
JNE32_03145	COG1447	Phosphotransferase system cellobiose-specific component IIA
JNE32_03150	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
JNE32_03155	COG2723	6-phospho-beta-galactosidase activity
JNE32_03160	COG2188	Transcriptional regulator
JNE32_03165	COG1940	carbohydrate kinase activity
JNE32_03170	COG1482	cell wall glycoprotein biosynthetic process
JNE32_03175	COG4124	Belongs to the glycosyl hydrolase 26 family
JNE32_03220	COG0611	Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1
JNE32_03225	COG0802	atpase or kinase
JNE32_03230	COG1214	PFAM Peptidase M22, glycoprotease
JNE32_03235	COG0456	acetyltransferase
JNE32_03240	COG0533	Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction
JNE32_03245	COG0488	(ABC) transporter
JNE32_03250	COG0315	cyclic pyranopterin monophosphate synthase activity
JNE32_03255	COG2344	Modulates transcription in response to changes in cellular NADH NAD( ) redox state
JNE32_03260	COG1826	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
JNE32_03265	COG0805	protein transport
JNE32_03275	COG1266	CAAX protease self-immunity
JNE32_03285	COG0459	protein refolding
JNE32_03290	COG1073	alpha beta
JNE32_03295	COG0457	Tetratricopeptide repeat
JNE32_03300	COG1063	alcohol dehydrogenase
JNE32_03305	COG2211	Major facilitator Superfamily
JNE32_03310	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
JNE32_03315	COG1842	Phage shock protein A
JNE32_03320	COG1198	Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
JNE32_03325	COG1512	COG1512 Beta-propeller domains of methanol dehydrogenase type
JNE32_03330	COG4260	virion core protein, lumpy skin disease virus
JNE32_03340	COG2814	Major facilitator Superfamily
JNE32_03345	COG1063	alcohol dehydrogenase
JNE32_03350	COG0797	Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides
JNE32_03355	COG0823	Involved in the tonB-independent uptake of proteins
JNE32_03370	COG2267	carboxylic ester hydrolase activity
JNE32_03380	COG2132	Multicopper oxidase
JNE32_03385	COG1113	amino acid transport
JNE32_03395	COG0053	Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family
JNE32_03400	COG0714	Associated with various cellular activities
JNE32_03405	COG1721	protein (some members contain a von Willebrand factor type A (vWA) domain
JNE32_03410	COG1305	Transglutaminase-like
JNE32_03420	COG0519	Catalyzes the synthesis of GMP from XMP
JNE32_03420	COG0518	GMP synthase (glutamine-hydrolyzing) activity
JNE32_03425	COG2252	PERMEase
JNE32_03430	COG3064	Membrane
JNE32_03440	COG4843	Uncharacterized protein conserved in bacteria (DUF2179)
JNE32_03450	COG0041	Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR)
JNE32_03455	COG0026	Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR)
JNE32_03460	COG0015	Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
JNE32_03465	COG0152	phosphoribosylaminoimidazolesuccinocarboxamide synthase activity
JNE32_03470	COG1828	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
JNE32_03475	COG0047	phosphoribosylformylglycinamidine synthase activity
JNE32_03480	COG0046	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
JNE32_03485	COG0034	Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine
JNE32_03490	COG0150	phosphoribosylformylglycinamidine cyclo-ligase activity
JNE32_03495	COG0299	Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate
JNE32_03500	COG0138	bifunctional purine biosynthesis protein purh
JNE32_03505	COG0151	Belongs to the GarS family
JNE32_03510	COG1522	sequence-specific DNA binding
JNE32_03515	COG0531	amino acid
JNE32_03525	COG1001	Belongs to the metallo-dependent hydrolases superfamily. Adenine deaminase family
JNE32_03530	COG1470	cell adhesion involved in biofilm formation
JNE32_03535	COG4496	protein, YerC YecD
JNE32_03540	COG0069	glutamate synthase activity
JNE32_03545	COG1646	35 carbon atoms) to the C3 hydroxyl of sn-glycerol-1-phosphate (G1P), producing heptaprenylglyceryl phosphate (HepGP). This reaction is an ether-bond-formation step in the biosynthesis of archaea-type G1P-based membrane lipids found in Bacillales
JNE32_03550	COG0210	DNA helicase
JNE32_03555	COG0272	DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
JNE32_03560	COG4851	CamS sex pheromone cAM373 precursor
JNE32_03565	COG2334	A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response
JNE32_03570	COG1285	pathogenesis
JNE32_03575	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
JNE32_03580	COG0721	Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
JNE32_03585	COG0154	amidase activity
JNE32_03590	COG0064	Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
JNE32_03595	COG1309	transcriptional regulator
JNE32_03600	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
JNE32_03605	COG1597	lipid kinase activity
JNE32_03610	COG2265	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
JNE32_03620	COG0457	Tetratricopeptide repeat
JNE32_03635	COG5444	nuclease activity
JNE32_03640	COG3391	amine dehydrogenase activity
JNE32_03645	COG0457	Tetratricopeptide repeat
JNE32_03655	COG0217	transcriptional regulatory protein
JNE32_03665	COG1309	transcriptional regulator
JNE32_03670	COG3631	Ketosteroid isomerase-related protein
JNE32_03675	COG0702	epimerase
JNE32_03690	COG3546	catalase activity
JNE32_03695	COG0454	-acetyltransferase
JNE32_03705	COG5578	integral membrane protein
JNE32_03710	COG2972	Histidine kinase
JNE32_03715	COG2207	Transcriptional regulator
JNE32_03715	COG4753	response regulator
JNE32_03720	COG1653	transport
JNE32_03725	COG1175	transmembrane transport
JNE32_03730	COG0395	ABC-type sugar transport system, permease component
JNE32_03735	COG4225	unsaturated rhamnogalacturonyl hydrolase activity
JNE32_03740	COG2207	Transcriptional regulator
JNE32_03745	COG2755	lipolytic protein G-D-S-L family
JNE32_03755	COG5578	integral membrane protein
JNE32_03760	COG3401	FG-GAP repeat protein
JNE32_03765	COG3401	FG-GAP repeat protein
JNE32_03770	COG2755	lipolytic protein G-D-S-L family
JNE32_03775	COG1874	Beta-galactosidase
JNE32_03785	COG1653	transport
JNE32_03790	COG4209	transmembrane transport
JNE32_03795	COG0395	ABC-type sugar transport system, permease component
JNE32_03800	COG1486	melibiose metabolic process
JNE32_03810	COG2329	Antibiotic biosynthesis monooxygenase
JNE32_03815	COG0346	lactoylglutathione lyase activity
JNE32_03830	COG5583	Uncharacterized small protein (DUF2292)
JNE32_03835	COG0670	Belongs to the BI1 family
JNE32_03840	COG0697	spore germination
JNE32_03845	COG1846	Transcriptional regulator
JNE32_03850	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
JNE32_03865	COG2124	cytochrome p450
JNE32_03865	COG0369	Component of the sulfite reductase complex that catalyzes the 6-electron reduction of sulfite to sulfide. This is one of several activities required for the biosynthesis of L- cysteine from sulfate. The flavoprotein component catalyzes the electron flow from NADPH - FAD - FMN to the hemoprotein component
JNE32_03870	COG1368	sulfuric ester hydrolase activity
JNE32_03875	COG1208	COG1208 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis translation initiation factor 2B, gamma epsilon subunits eIF-2Bgamma eIF-2Bepsilon
JNE32_03880	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
JNE32_03885	COG1442	glycosyl transferase family 8
JNE32_03890	COG1216	Glycosyl transferase, family 2
JNE32_03895	COG1442	glycosyl transferase family 8
JNE32_03900	COG2223	nitrite transmembrane transporter activity
JNE32_03905	COG1011	Hydrolase
JNE32_03910	COG0531	amino acid
JNE32_03915	COG1012	belongs to the aldehyde dehydrogenase family
JNE32_03920	COG0840	transmembrane signaling receptor activity
JNE32_03925	COG0488	(ABC) transporter
JNE32_03935	COG0789	Transcriptional regulator
JNE32_03940	COG2814	Major facilitator Superfamily
JNE32_03950	COG0488	(ABC) transporter
JNE32_03955	COG0513	Belongs to the DEAD box helicase family
JNE32_03960	COG0456	acetyltransferase
JNE32_03965	COG2130	NADP-dependent
JNE32_03970	COG2211	Major facilitator Superfamily
JNE32_03975	COG1262	PFAM Formylglycine-generating sulfatase enzyme
JNE32_03980	COG1120	ATPase activity
JNE32_03985	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
JNE32_03990	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
JNE32_03995	COG4594	ABC-type Fe3 -citrate transport system, periplasmic component
JNE32_04010	COG3866	Pectate lyase
JNE32_04015	COG0471	metal ion transport
JNE32_04020	COG3290	protein histidine kinase activity
JNE32_04025	COG4565	transcriptional regulatory protein
JNE32_04030	COG3181	Tripartite tricarboxylate transporter family receptor
JNE32_04035	COG2851	Citrate transporter
JNE32_04040	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
JNE32_04045	COG4362	Belongs to the NOS family. Bacterial NOS oxygenase subfamily
JNE32_04050	COG1254	Belongs to the acylphosphatase family
JNE32_04055	COG2258	MOSC domain
JNE32_04075	COG0024	Methionine aminopeptidase
JNE32_04080	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
JNE32_04080	COG1263	PTS System
JNE32_04085	COG1368	sulfuric ester hydrolase activity
JNE32_04100	COG1115	amino acid carrier protein
JNE32_04105	COG0531	amino acid
JNE32_04120	COG0697	spore germination
JNE32_04125	COG1263	PTS System
JNE32_04125	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
JNE32_04130	COG0366	Alpha amylase catalytic
JNE32_04135	COG2188	Transcriptional regulator
JNE32_04140	COG0778	Nitroreductase
JNE32_04145	COG0737	Belongs to the 5'-nucleotidase family
JNE32_04150	COG0693	protein deglycase activity
JNE32_04155	COG2814	Major facilitator Superfamily
JNE32_04160	COG4840	Belongs to the UPF0435 family
JNE32_04165	COG0394	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
JNE32_04170	COG4980	gas vesicle protein
JNE32_04175	COG1295	ribonuclease BN
JNE32_04180	COG0477	Major facilitator Superfamily
JNE32_04185	COG0387	Pfam Sodium calcium exchanger
JNE32_04195	COG0668	transmembrane transport
JNE32_04200	COG0535	radical SAM domain protein
JNE32_04210	COG0726	polysaccharide deacetylase
JNE32_04215	COG2084	Dehydrogenase
JNE32_04220	COG0598	Magnesium transport protein CorA
JNE32_04225	COG0122	3-methyladenine DNA glycosylase 8-oxoguanine DNA glycosylase
JNE32_04230	COG2265	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
JNE32_04240	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
JNE32_04245	COG4637	Psort location Cytoplasmic, score
JNE32_04250	COG1071	oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor
JNE32_04255	COG0022	dehydrogenase e1 component
JNE32_04260	COG0508	dehydrogenase complex catalyzes the overall conversion of
JNE32_04265	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
JNE32_04270	COG3284	Transcriptional regulator
JNE32_04280	COG1742	UPF0060 membrane protein
JNE32_04300	COG4842	Belongs to the WXG100 family
JNE32_04305	COG1486	melibiose metabolic process
JNE32_04310	COG1737	Transcriptional regulator
JNE32_04315	COG1263	PTS System
JNE32_04315	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
JNE32_04320	COG5434	Belongs to the glycosyl hydrolase 28 family
JNE32_04325	COG1132	(ABC) transporter
JNE32_04330	COG1132	(ABC) transporter
JNE32_04335	COG2259	Doxx family
JNE32_04340	COG2514	catechol 2,3-dioxygenase activity
JNE32_04345	COG4585	Histidine kinase
JNE32_04350	COG2197	response regulator
JNE32_04355	COG1131	(ABC) transporter
JNE32_04360	COG1511	domain protein
JNE32_04360	COG0842	Transport permease protein
JNE32_04365	COG0842	Transport permease protein
JNE32_04370	COG1695	Transcriptional regulator
JNE32_04375	COG1075	acetyltransferases and hydrolases with the alpha beta hydrolase fold
JNE32_04380	COG3936	Protein involved in polysaccharide intercellular adhesin (PIA) synthesis biofilm formation
JNE32_04385	COG2318	DinB family
JNE32_04390	COG2814	Major facilitator Superfamily
JNE32_04395	COG1846	Transcriptional regulator
JNE32_04400	COG0392	lysyltransferase activity
JNE32_04400	COG2898	Catalyzes the transfer of a lysyl group from L-lysyl- tRNA(Lys) to membrane-bound phosphatidylglycerol (PG), which produces lysylphosphatidylglycerol (LPG), a major component of the bacterial membrane with a positive net charge. LPG synthesis contributes to bacterial virulence as it is involved in the resistance mechanism against cationic antimicrobial peptides (CAMP) produces by the host's immune system (defensins, cathelicidins) and by the competing microorganisms
JNE32_04405	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
JNE32_04410	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
JNE32_04415	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
JNE32_04420	COG0384	phenazine biosynthesis protein PhzF
JNE32_04425	COG0778	Nitroreductase
JNE32_04440	COG1090	epimerase
JNE32_04445	COG2137	regulation of response to DNA damage stimulus
JNE32_04455	COG2814	Major facilitator Superfamily
JNE32_04470	COG3103	Sh3 type 3 domain protein
JNE32_04475	COG5658	integral membrane protein
JNE32_04480	COG0596	Alpha beta hydrolase
JNE32_04485	COG0463	Glycosyl transferase, family 2
JNE32_04490	COG4485	Bacterial membrane protein, YfhO
JNE32_04495	COG1988	membrane-bound metal-dependent
JNE32_04500	COG1194	a g-specific adenine glycosylase
JNE32_04510	COG1028	Short-chain dehydrogenase reductase Sdr
JNE32_04525	COG3557	Belongs to the UPF0374 family
JNE32_04530	COG1132	(ABC) transporter
JNE32_04535	COG4129	membrane
JNE32_04540	COG0001	glutamate-1-semialdehyde 2,1-aminomutase activity
JNE32_04545	COG1225	Alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen
JNE32_04550	COG0735	belongs to the Fur family
JNE32_04660	COG4326	sporulation control protein
JNE32_04670	COG5577	PFAM Coat F domain
JNE32_04675	COG3340	Belongs to the peptidase S51 family
JNE32_04680	COG0422	Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction
JNE32_04685	COG0277	FAD linked oxidase domain protein
JNE32_04695	COG0753	catalase activity
JNE32_04700	COG1116	anion transmembrane transporter activity
JNE32_04705	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
JNE32_04710	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
JNE32_04715	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
JNE32_04725	COG0199	Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
JNE32_04735	COG1476	TRANSCRIPTIONal
JNE32_04745	COG3382	B3 4 domain protein
JNE32_04750	COG1600	Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr)
JNE32_04760	COG0219	Methylates the ribose at the nucleotide 34 wobble position in the two leucyl isoacceptors tRNA(Leu)(CmAA) and tRNA(Leu)(cmnm5UmAA). Catalyzes the methyl transfer from S- adenosyl-L-methionine to the 2'-OH of the wobble nucleotide
JNE32_04765	COG0789	Transcriptional regulator
JNE32_04770	COG1664	Polymer-forming cytoskeletal
JNE32_04775	COG1664	Polymer-forming cytoskeletal
JNE32_04780	COG2766	serine protein kinase
JNE32_04785	COG2718	Belongs to the UPF0229 family
JNE32_04790	COG1846	Transcriptional regulator
JNE32_04795	COG1566	PFAM secretion protein HlyD family protein
JNE32_04800	COG2814	Major facilitator Superfamily
JNE32_04805	COG0655	NAD(P)H dehydrogenase (quinone) activity
JNE32_04825	COG1725	Transcriptional regulator
JNE32_04830	COG1131	(ABC) transporter
JNE32_04835	COG1131	(ABC) transporter
JNE32_04840	COG1277	ABC-type transport system involved in multi-copper enzyme maturation permease component
JNE32_04845	COG1278	Cold shock
JNE32_04850	COG1464	Belongs to the NlpA lipoprotein family
JNE32_04855	COG3706	GGDEF domain
JNE32_04860	COG1823	symporter activity
JNE32_04880	COG5577	PFAM Coat F domain
JNE32_04885	COG4085	toxin activity
JNE32_04885	COG0737	Belongs to the 5'-nucleotidase family
JNE32_04885	COG1525	nuclease
JNE32_04890	COG3764	Sortase (surface protein transpeptidase)
JNE32_04895	COG0564	pseudouridine synthase activity
JNE32_04905	COG0517	IMP dehydrogenase activity
JNE32_04910	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
JNE32_04915	COG3153	acetyltransferase
JNE32_04915	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
JNE32_04920	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
JNE32_04925	COG1954	Regulates expression of the glpD operon. In the presence of glycerol 3-phosphate (G3P) causes antitermination of transcription of glpD at the inverted repeat of the leader region to enhance its transcription. Binds and stabilizes glpD leader mRNA
JNE32_04930	COG0580	Belongs to the MIP aquaporin (TC 1.A.8) family
JNE32_04935	COG0554	Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
JNE32_04940	COG0578	Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family
JNE32_04945	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
JNE32_04950	COG2203	Gaf domain
JNE32_04950	COG4585	Histidine kinase
JNE32_04955	COG2197	response regulator
JNE32_04960	COG0431	NADPH-dependent FMN reductase
JNE32_04975	COG0791	NLP P60 protein
JNE32_04975	COG1388	LysM domain
JNE32_04980	COG1959	2 iron, 2 sulfur cluster binding
JNE32_04985	COG0668	transmembrane transport
JNE32_04990	COG2719	SpoVR family
JNE32_04995	COG1785	Belongs to the alkaline phosphatase family
JNE32_05000	COG1388	LysM domain
JNE32_05000	COG0791	NLP P60 protein
JNE32_05005	COG0583	DNA-binding transcription factor activity
JNE32_05010	COG0372	Belongs to the citrate synthase family
JNE32_05015	COG1028	Short-chain dehydrogenase reductase Sdr
JNE32_05020	COG0531	amino acid
JNE32_05025	COG0733	neurotransmitter:sodium symporter activity
JNE32_05030	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
JNE32_05050	COG1595	DNA-templated transcription, initiation
JNE32_05055	COG0667	Aldo Keto reductase
JNE32_05060	COG0204	Acyl-transferase
JNE32_05065	COG1253	flavin adenine dinucleotide binding
JNE32_05070	COG0789	Transcriptional regulator
JNE32_05075	COG0436	Aminotransferase
JNE32_05080	COG1253	flavin adenine dinucleotide binding
JNE32_05085	COG0239	Important for reducing fluoride concentration in the cell, thus reducing its toxicity
JNE32_05090	COG0239	Important for reducing fluoride concentration in the cell, thus reducing its toxicity
JNE32_05095	COG0584	glycerophosphoryl diester phosphodiesterase
JNE32_05105	COG0668	transmembrane transport
JNE32_05110	COG0846	NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form
JNE32_05115	COG0726	polysaccharide deacetylase
JNE32_05120	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
JNE32_05125	COG1757	Na H antiporter
JNE32_05130	COG0589	response to stress
JNE32_05140	COG1132	(ABC) transporter
JNE32_05145	COG1132	(ABC) transporter
JNE32_05170	COG0189	ligase activity
JNE32_05175	COG0189	ligase activity
JNE32_05180	COG4399	Belongs to the UPF0754 family
JNE32_05185	COG3679	Belongs to the UPF0342 family
JNE32_05190	COG4335	DNA alkylation repair
JNE32_05195	COG0561	phosphatase activity
JNE32_05200	COG0635	Involved in the biosynthesis of porphyrin-containing compound
JNE32_05205	COG0475	glutathione-regulated potassium exporter activity
JNE32_05210	COG0490	domain, Protein
JNE32_05220	COG1024	Enoyl-CoA hydratase
JNE32_05230	COG4152	abc transporter atp-binding protein
JNE32_05235	COG1668	transmembrane transport
JNE32_05240	COG0420	3'-5' exonuclease activity
JNE32_05245	COG4717	serine-type aminopeptidase activity
JNE32_05250	COG3481	metal-dependent phosphohydrolase, HD sub domain
JNE32_05260	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
JNE32_05290	COG1846	Transcriptional regulator
JNE32_05295	COG4980	gas vesicle protein
JNE32_05310	COG1932	Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine
JNE32_05315	COG0537	adenosine 5'-monophosphoramidase activity
JNE32_05320	COG1131	(ABC) transporter
JNE32_05325	COG4473	ABC transporter
JNE32_05335	COG1473	amidohydrolase
JNE32_05340	COG3069	C4-dicarboxylate transmembrane transporter activity
JNE32_05350	COG2329	Antibiotic biosynthesis monooxygenase
JNE32_05355	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
JNE32_05360	COG0407	Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III
JNE32_05365	COG0276	Catalyzes the ferrous insertion into protoporphyrin IX
JNE32_05370	COG1232	Catalyzes the 6-electron oxidation of protoporphyrinogen-IX to form protoporphyrin-IX
JNE32_05375	COG1309	transcriptional regulator
JNE32_05380	COG1511	domain protein
JNE32_05390	COG4377	Putative membrane peptidase family (DUF2324)
JNE32_05400	COG1363	Peptidase, m42
JNE32_05405	COG4405	Protein conserved in bacteria
JNE32_05410	COG1301	dicarboxylic acid transport
JNE32_05420	COG1234	tRNA 3'-trailer cleavage
JNE32_05425	COG0095	Lipoate-protein ligase
JNE32_05430	COG0702	epimerase
JNE32_05435	COG0318	PFAM AMP-dependent synthetase and ligase
JNE32_05445	COG0501	Belongs to the peptidase M48B family
JNE32_05450	COG1404	Belongs to the peptidase S8 family
JNE32_05460	COG0604	alcohol dehydrogenase
JNE32_05465	COG4594	ABC-type Fe3 -citrate transport system, periplasmic component
JNE32_05470	COG0406	alpha-ribazole phosphatase activity
JNE32_05475	COG0183	Belongs to the thiolase family
JNE32_05480	COG0318	PFAM AMP-dependent synthetase and ligase
JNE32_05485	COG1268	BioY protein
JNE32_05490	COG0840	transmembrane signaling receptor activity
JNE32_05495	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
JNE32_05495	COG0723	plastoquinol--plastocyanin reductase activity
JNE32_05500	COG1028	Short-chain dehydrogenase reductase Sdr
JNE32_05510	COG4903	ComK protein
JNE32_05515	COG1028	Short-chain dehydrogenase reductase Sdr
JNE32_05525	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
JNE32_05540	COG0398	Pfam SNARE associated Golgi protein
JNE32_05545	COG0681	Belongs to the peptidase S26 family
JNE32_05550	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
JNE32_05555	COG1846	Transcriptional regulator
JNE32_05560	COG0738	Major facilitator superfamily
JNE32_05565	COG0673	inositol 2-dehydrogenase activity
JNE32_05570	COG0561	phosphatase activity
JNE32_05575	COG0399	UDP-4-amino-4-deoxy-L-arabinose aminotransferase
JNE32_05580	COG1609	Transcriptional regulator
JNE32_05585	COG3180	Ammonia monooxygenase
JNE32_05590	COG2814	Major facilitator Superfamily
JNE32_05590	COG0477	Major facilitator Superfamily
JNE32_05595	COG4533	DNA binding
JNE32_05605	COG1633	Catalyzes the formation of the isocyclic ring in chlorophyll biosynthesis. Mediates the cyclase reaction, which results in the formation of divinylprotochlorophyllide (Pchlide) characteristic of all chlorophylls from magnesium-protoporphyrin IX 13-monomethyl ester (MgPMME)
JNE32_05610	COG3857	The heterodimer acts as both an ATP-dependent DNA helicase and an ATP-dependent, dual-direction single-stranded exonuclease. Recognizes the chi site generating a DNA molecule suitable for the initiation of homologous recombination
JNE32_05615	COG1074	ATP-dependent DNA helicase activity
JNE32_05620	COG0420	3'-5' exonuclease activity
JNE32_05625	COG0419	ATPase involved in DNA repair
JNE32_05630	COG1403	HNH endonuclease
JNE32_05670	COG5337	Spore coat protein CotH
JNE32_05675	COG0179	Fumarylacetoacetate (FAA) hydrolase
JNE32_05685	COG1404	Belongs to the peptidase S8 family
JNE32_05695	COG0367	asparagine synthase
JNE32_05700	COG2318	DinB family
JNE32_05705	COG1562	ergosterol biosynthetic process
JNE32_05710	COG0534	Mate efflux family protein
JNE32_05715	COG2207	Transcriptional regulator
JNE32_05715	COG1917	Cupin 2, conserved barrel domain protein
JNE32_05720	COG1609	Transcriptional regulator
JNE32_05725	COG0673	inositol 2-dehydrogenase activity
JNE32_05730	COG2318	DinB family
JNE32_05735	COG1279	arginine transmembrane transporter activity
JNE32_05740	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
JNE32_05745	COG1357	PFAM Pentapeptide repeats (8 copies)
JNE32_05750	COG2267	carboxylic ester hydrolase activity
JNE32_05755	COG0529	Catalyzes the synthesis of activated sulfate
JNE32_05760	COG2046	Belongs to the sulfate adenylyltransferase family
JNE32_05765	COG0175	sulfate reduction
JNE32_05770	COG2045	Belongs to the ComB family
JNE32_05775	COG1809	phosphosulfolactate synthase activity
JNE32_05780	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
JNE32_05785	COG4948	Mandelate Racemase Muconate Lactonizing
JNE32_05790	COG2814	Major facilitator Superfamily
JNE32_05795	COG0454	-acetyltransferase
JNE32_05800	COG2153	protein acetylation
JNE32_05805	COG0646	methionine synthase
JNE32_05805	COG0685	methylenetetrahydrofolate reductase (NAD(P)H) activity
JNE32_05810	COG1666	GTP binding
JNE32_05815	COG2996	Protein conserved in bacteria
JNE32_05835	COG1695	Transcriptional regulator
JNE32_05850	COG3227	Zinc metalloprotease (Elastase)
JNE32_05855	COG1307	EDD domain protein, DegV family
JNE32_05860	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
JNE32_05880	COG0561	phosphatase activity
JNE32_05885	COG1073	alpha beta
JNE32_05890	COG2151	metal-sulfur cluster biosynthetic enzyme
JNE32_05900	COG0277	FAD linked oxidase domain protein
JNE32_05905	COG2271	Major facilitator Superfamily
JNE32_05910	COG0002	Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde
JNE32_05915	COG1364	Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis the synthesis of N- acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate
JNE32_05925	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
JNE32_05930	COG0505	Belongs to the CarA family
JNE32_05935	COG0458	carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity
JNE32_05940	COG0078	Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
JNE32_05955	COG2267	carboxylic ester hydrolase activity
JNE32_05965	COG1744	ABC transporter substrate-binding protein PnrA-like
JNE32_05980	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
JNE32_05985	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
JNE32_05990	COG5504	Zn-dependent protease
JNE32_05995	COG0444	Belongs to the ABC transporter superfamily
JNE32_06000	COG4608	Belongs to the ABC transporter superfamily
JNE32_06010	COG0601	transmembrane transport
JNE32_06015	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
JNE32_06025	COG0180	Tryptophanyl-tRNA synthetase
JNE32_06030	COG4166	transmembrane transport
JNE32_06035	COG0601	transmembrane transport
JNE32_06040	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
JNE32_06045	COG0444	Belongs to the ABC transporter superfamily
JNE32_06050	COG4608	Belongs to the ABC transporter superfamily
JNE32_06055	COG2814	Major facilitator Superfamily
JNE32_06060	COG0456	acetyltransferase
JNE32_06065	COG1393	Belongs to the ArsC family
JNE32_06070	COG0861	Integral membrane protein TerC family
JNE32_06080	COG4862	establishment of competence for transformation
JNE32_06090	COG4469	Competence protein
JNE32_06095	COG1164	Oligoendopeptidase f
JNE32_06105	COG2761	dithiol-disulfide isomerase involved in polyketide biosynthesis
JNE32_06110	COG2346	COG2346, Truncated hemoglobins
JNE32_06115	COG0741	lytic transglycosylase activity
JNE32_06120	COG4116	CYTH
JNE32_06130	COG2357	RelA SpoT domain protein
JNE32_06135	COG0061	Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
JNE32_06140	COG0564	pseudouridine synthase activity
JNE32_06145	COG0639	Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP
JNE32_06150	COG0475	glutathione-regulated potassium exporter activity
JNE32_06150	COG0569	domain protein
JNE32_06155	COG0819	Catalyzes an amino-pyrimidine hydrolysis reaction at the C5' of the pyrimidine moiety of thiamine compounds, a reaction that is part of a thiamine salvage pathway
JNE32_06160	COG0352	thiamine-phosphate diphosphorylase activity
JNE32_06165	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
JNE32_06170	COG2104	thiamine diphosphate biosynthetic process
JNE32_06175	COG2022	thiamine diphosphate biosynthetic process
JNE32_06180	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
JNE32_06185	COG0351	phosphomethylpyrimidine kinase
JNE32_06190	COG0623	enoyl-[acyl-carrier-protein] reductase (NADH) activity
JNE32_06245	COG0210	DNA helicase
JNE32_06255	COG2153	protein acetylation
JNE32_06260	COG1514	Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'- phosphomonoester
JNE32_06265	COG2382	esterase
JNE32_06270	COG0626	cystathionine gamma-synthase activity
JNE32_06275	COG0626	cystathionine gamma-synthase activity
JNE32_06285	COG5505	Protein of unknown function (DUF819)
JNE32_06310	COG5444	nuclease activity
JNE32_06350	COG1359	(4S)-4-hydroxy-5-phosphonooxypentane-2,3-dione isomerase activity
JNE32_06355	COG1028	Short-chain dehydrogenase reductase Sdr
JNE32_06365	COG3711	transcriptional antiterminator
JNE32_06365	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
JNE32_06370	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
JNE32_06370	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
JNE32_06370	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
JNE32_06375	COG1482	cell wall glycoprotein biosynthetic process
JNE32_06385	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
JNE32_06395	COG2606	Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
JNE32_06410	COG0109	protoheme IX farnesyltransferase activity
JNE32_06420	COG0726	polysaccharide deacetylase
JNE32_06435	COG5504	Zn-dependent protease
JNE32_06440	COG2205	protein histidine kinase activity
JNE32_06450	COG3383	formate dehydrogenase (NAD+) activity
JNE32_06455	COG2427	Protein of unknown function (DUF1641)
JNE32_06465	COG1051	belongs to the nudix hydrolase family
JNE32_06475	COG2124	cytochrome p450
JNE32_06480	COG1819	glycosyl
JNE32_06490	COG1587	Uroporphyrinogen-III synthase
JNE32_06495	COG0390	transport system, permease component
JNE32_06500	COG1117	ATPase-coupled phosphate ion transmembrane transporter activity
JNE32_06505	COG0697	spore germination
JNE32_06510	COG4297	protein containing double-stranded beta helix domain
JNE32_06520	COG1252	NADH dehydrogenase
JNE32_06525	COG1904	glucuronate isomerase
JNE32_06530	COG2211	Major facilitator Superfamily
JNE32_06535	COG2055	Belongs to the LDH2 MDH2 oxidoreductase family
JNE32_06540	COG1063	alcohol dehydrogenase
JNE32_06545	COG1312	Catalyzes the dehydration of D-mannonate
JNE32_06550	COG1028	Short-chain dehydrogenase reductase Sdr
JNE32_06555	COG2271	Major facilitator Superfamily
JNE32_06560	COG1609	Transcriptional regulator
JNE32_06565	COG0246	Mannitol dehydrogenase
JNE32_06570	COG2721	sulfolactate sulfo-lyase activity
JNE32_06575	COG0730	response to heat
JNE32_06580	COG2318	DinB family
JNE32_06585	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
JNE32_06590	COG0457	Tetratricopeptide repeat
JNE32_06600	COG2350	Protein conserved in bacteria
JNE32_06605	COG3409	Peptidoglycan-binding domain 1 protein
JNE32_06605	COG5632	N-Acetylmuramoyl-L-alanine amidase
JNE32_06605	COG1388	LysM domain
JNE32_06615	COG4195	phage-related replication protein
JNE32_06620	COG3546	catalase activity
JNE32_06625	COG2856	Zn peptidase
JNE32_06630	COG1396	sequence-specific DNA binding
JNE32_06640	COG1522	sequence-specific DNA binding
JNE32_06645	COG1484	DNA-dependent DNA replication
JNE32_06665	COG1595	DNA-templated transcription, initiation
JNE32_06670	COG5484	DNA packaging
JNE32_06670	COG3728	DNA packaging
JNE32_06675	COG1783	phage Terminase large subunit
JNE32_06680	COG5518	Phage portal protein
JNE32_06685	COG0338	D12 class N6 adenine-specific DNA methyltransferase
JNE32_06690	COG4653	Phage capsid family
JNE32_06745	COG1652	LysM domain
JNE32_06750	COG4193	domain, Protein
JNE32_06760	COG3628	GPW Gp25 family protein
JNE32_06765	COG3299	homolog of phage Mu protein gp47
JNE32_06770	COG3778	Protein conserved in bacteria
JNE32_06810	COG5632	N-Acetylmuramoyl-L-alanine amidase
JNE32_06810	COG3409	Peptidoglycan-binding domain 1 protein
JNE32_06830	COG0306	phosphate transporter
JNE32_06835	COG1392	Phosphate transport regulator
JNE32_06840	COG0531	amino acid
JNE32_06845	COG0346	lactoylglutathione lyase activity
JNE32_06850	COG1807	4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family
JNE32_06855	COG0463	Glycosyl transferase, family 2
JNE32_06860	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
JNE32_06865	COG0345	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
JNE32_06870	COG2362	D-Aminopeptidase
JNE32_06875	COG0601	transmembrane transport
JNE32_06880	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
JNE32_06885	COG0444	Belongs to the ABC transporter superfamily
JNE32_06890	COG4166	transmembrane transport
JNE32_06895	COG1619	proteins homologs of microcin C7 resistance protein MccF
JNE32_06900	COG4948	Mandelate Racemase Muconate Lactonizing
JNE32_06905	COG0791	NLP P60 protein
JNE32_06910	COG4608	Belongs to the ABC transporter superfamily
JNE32_06915	COG2706	6-phosphogluconolactonase activity
JNE32_06920	COG1834	amidinotransferase
JNE32_06925	COG1607	acyl-coa hydrolase
JNE32_06930	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
JNE32_06930	COG1017	nitric oxide dioxygenase activity
JNE32_06940	COG2323	membrane
JNE32_06945	COG2318	DinB family
JNE32_06950	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
JNE32_06955	COG2076	Multidrug Resistance protein
JNE32_06960	COG2076	Multidrug Resistance protein
JNE32_06965	COG0788	formyltetrahydrofolate deformylase activity
JNE32_06970	COG0263	Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate
JNE32_06975	COG0014	Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5- carboxylate
JNE32_06980	COG1764	response to oxidative stress
JNE32_06985	COG1846	Transcriptional regulator
JNE32_06990	COG1764	response to oxidative stress
JNE32_07000	COG0590	tRNA wobble adenosine to inosine editing
JNE32_07005	COG0620	Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation
JNE32_07010	COG1404	Belongs to the peptidase S8 family
JNE32_07015	COG1366	Belongs to the anti-sigma-factor antagonist family
JNE32_07020	COG0619	Transmembrane (T) component of an energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
JNE32_07025	COG1122	ATPase activity
JNE32_07030	COG4721	ABC-type cobalt transport system, permease component
JNE32_07040	COG0745	RESPONSE REGULATOR receiver
JNE32_07045	COG3850	Histidine kinase
JNE32_07045	COG5002	protein histidine kinase activity
JNE32_07050	COG3212	peptidase
JNE32_07055	COG3212	peptidase
JNE32_07065	COG2239	Acts as a magnesium transporter
JNE32_07070	COG0789	Transcriptional regulator
JNE32_07085	COG1846	Transcriptional regulator
JNE32_07090	COG0707	Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
JNE32_07095	COG0726	polysaccharide deacetylase
JNE32_07100	COG1408	metallophosphoesterase
JNE32_07110	COG0463	Glycosyl transferase, family 2
JNE32_07115	COG1793	dna ligase
JNE32_07115	COG3285	dna ligase
JNE32_07120	COG1273	With LigD forms a non-homologous end joining (NHEJ) DNA repair enzyme, which repairs dsDNA breaks with reduced fidelity. Binds linear dsDNA with 5'- and 3'- overhangs but not closed circular dsDNA nor ssDNA. Recruits and stimulates the ligase activity of LigD
JNE32_07125	COG3300	MHYT domain
JNE32_07125	COG5001	Diguanylate cyclase
JNE32_07130	COG0586	Pfam SNARE associated Golgi protein
JNE32_07135	COG0861	Integral membrane protein TerC family
JNE32_07140	COG1191	sigma factor activity
JNE32_07160	COG0501	Belongs to the peptidase M48B family
JNE32_07165	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
JNE32_07180	COG3594	Acyltransferase
JNE32_07185	COG5002	protein histidine kinase activity
JNE32_07190	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
JNE32_07200	COG0182	Catalyzes the interconversion of methylthioribose-1- phosphate (MTR-1-P) into methylthioribulose-1-phosphate (MTRu-1- P)
JNE32_07205	COG4857	Catalyzes the phosphorylation of methylthioribose into methylthioribose-1-phosphate
JNE32_07210	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
JNE32_07215	COG0436	Aminotransferase
JNE32_07220	COG1850	ribulose-bisphosphate carboxylase activity
JNE32_07225	COG4359	Dephosphorylates 2-hydroxy-3-keto-5-methylthiopentenyl- 1-phosphate (HK-MTPenyl-1-P) yielding 1,2-dihydroxy-3-keto-5- methylthiopentene (DHK-MTPene)
JNE32_07230	COG0235	Class ii aldolase
JNE32_07235	COG1791	Catalyzes 2 different reactions between oxygene and the acireductone 1,2-dihydroxy-3-keto-5-methylthiopentene (DHK-MTPene) depending upon the metal bound in the active site. Fe-containing acireductone dioxygenase (Fe-ARD) produces formate and 2-keto-4- methylthiobutyrate (KMTB), the alpha-ketoacid precursor of methionine in the methionine recycle pathway. Ni-containing acireductone dioxygenase (Ni-ARD) produces methylthiopropionate, carbon monoxide and formate, and does not lie on the methionine recycle pathway
JNE32_07240	COG3339	Conserved Protein
JNE32_07255	COG3852	Histidine kinase
JNE32_07260	COG1846	Transcriptional regulator
JNE32_07265	COG1360	Flagellar Motor Protein
JNE32_07270	COG1291	archaeal or bacterial-type flagellum-dependent cell motility
JNE32_07275	COG0542	response to heat
JNE32_07280	COG3949	Membrane
JNE32_07285	COG0603	Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0))
JNE32_07290	COG0720	synthase
JNE32_07295	COG0602	queuosine metabolic process
JNE32_07300	COG0780	Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1)
JNE32_07305	COG1733	regulation of RNA biosynthetic process
JNE32_07310	COG1028	Short-chain dehydrogenase reductase Sdr
JNE32_07315	COG1388	LysM domain
JNE32_07315	COG4641	Protein conserved in bacteria
JNE32_07320	COG1388	LysM domain
JNE32_07325	COG3858	chitin binding
JNE32_07335	COG4873	Protein conserved in bacteria
JNE32_07345	COG3773	Cell wall hydrolase
JNE32_07350	COG2244	polysaccharide biosynthetic process
JNE32_07355	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
JNE32_07360	COG2217	Heavy metal translocating P-type atpase
JNE32_07370	COG0006	proline dipeptidase activity
JNE32_07375	COG1609	Transcriptional regulator
JNE32_07380	COG3711	transcriptional antiterminator
JNE32_07385	COG1263	PTS System
JNE32_07385	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
JNE32_07385	COG2190	(PTS) system
JNE32_07390	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
JNE32_07395	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
JNE32_07405	COG1533	DNA photolyase activity
JNE32_07410	COG0456	acetyltransferase
JNE32_07415	COG0840	transmembrane signaling receptor activity
JNE32_07420	COG2084	Dehydrogenase
JNE32_07425	COG2340	Cysteine-rich secretory protein family
JNE32_07430	COG0768	penicillin binding
JNE32_07435	COG4191	Histidine kinase
JNE32_07440	COG0436	Aminotransferase
JNE32_07450	COG0835	chemotaxis
JNE32_07450	COG0784	Response regulator, receiver
JNE32_07460	COG2814	Major facilitator Superfamily
JNE32_07465	COG1376	ErfK ybiS ycfS ynhG family protein
JNE32_07470	COG1408	metallophosphoesterase
JNE32_07475	COG1028	Short-chain dehydrogenase reductase Sdr
JNE32_07480	COG2200	EAL domain
JNE32_07485	COG4703	Protein of unknown function (DUF1797)
JNE32_07490	COG1978	Selenoprotein B, glycine betaine sarcosine D-proline reductase family
JNE32_07500	COG0517	IMP dehydrogenase activity
JNE32_07505	COG0583	DNA-binding transcription factor activity
JNE32_07510	COG0716	FMN binding
JNE32_07520	COG0716	FMN binding
JNE32_07525	COG2171	N-acyltransferase activity
JNE32_07530	COG1473	amidohydrolase
JNE32_07540	COG0668	transmembrane transport
JNE32_07545	COG0450	alkyl hydroperoxide reductase
JNE32_07550	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
JNE32_07565	COG0746	molybdenum cofactor guanylyltransferase activity
JNE32_07570	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
JNE32_07575	COG0303	'Molybdopterin
JNE32_07580	COG1763	Mo-molybdopterin cofactor biosynthetic process
JNE32_07585	COG0314	molybdopterin synthase activity
JNE32_07590	COG1977	Involved in sulfur transfer in the conversion of molybdopterin precursor Z to molybdopterin
JNE32_07595	COG1132	(ABC) transporter
JNE32_07600	COG1132	(ABC) transporter
JNE32_07610	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
JNE32_07615	COG1136	(ABC) transporter
JNE32_07620	COG0577	efflux transmembrane transporter activity
JNE32_07625	COG1349	DNA-binding transcription factor activity
JNE32_07630	COG1105	Belongs to the carbohydrate kinase PfkB family
JNE32_07635	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
JNE32_07635	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
JNE32_07635	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
JNE32_07640	COG0681	Belongs to the peptidase S26 family
JNE32_07650	COG0488	(ABC) transporter
JNE32_07655	COG1893	Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
JNE32_07660	COG2309	aminopeptidase activity
JNE32_07670	COG1077	Cell shape determining protein MreB Mrl
JNE32_07675	COG2002	toxin-antitoxin pair type II binding
JNE32_07680	COG3852	Histidine kinase
JNE32_07690	COG0569	domain protein
JNE32_07695	COG1001	Belongs to the metallo-dependent hydrolases superfamily. Adenine deaminase family
JNE32_07700	COG0595	An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
JNE32_07705	COG5503	Protein of unknown function (DUF1447)
JNE32_07710	COG0561	phosphatase activity
JNE32_07715	COG0242	peptide deformylase activity
JNE32_07725	COG0497	DNA recombination
JNE32_07730	COG1071	oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor
JNE32_07735	COG0022	dehydrogenase e1 component
JNE32_07740	COG0508	dehydrogenase complex catalyzes the overall conversion of
JNE32_07745	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
JNE32_07750	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
JNE32_07760	COG1982	Orn Lys Arg decarboxylase major
JNE32_07765	COG4476	Belongs to the UPF0223 family
JNE32_07770	COG4493	Belongs to the UPF0637 family
JNE32_07780	COG0483	inositol monophosphate 1-phosphatase activity
JNE32_07790	COG3315	Exhibits S-adenosyl-L-methionine-dependent methyltransferase activity
JNE32_07810	COG1595	DNA-templated transcription, initiation
JNE32_07830	COG1217	gtp-binding protein TYPA
JNE32_07840	COG4896	Protein conserved in bacteria
JNE32_07850	COG1875	ATPase related to phosphate starvation-inducible protein PhoH
JNE32_07855	COG2041	Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. The catalytic subunit MsrP is non-stereospecific, being able to reduce both (R-) and (S-) diastereoisomers of methionine sulfoxide
JNE32_07860	COG2066	Belongs to the glutaminase family
JNE32_07865	COG4838	Belongs to the UPF0358 family
JNE32_07870	COG0772	Belongs to the SEDS family
JNE32_07875	COG1038	Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second
JNE32_07880	COG1612	heme a metabolic process
JNE32_07885	COG0109	protoheme IX farnesyltransferase activity
JNE32_07890	COG1622	oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor
JNE32_07890	COG2010	Cytochrome c
JNE32_07895	COG0843	Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B
JNE32_07900	COG1845	cytochrome c oxidase, subunit III
JNE32_07905	COG3125	oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor
JNE32_07910	COG3336	cytochrome c oxidase
JNE32_07920	COG2905	signal-transduction protein containing cAMP-binding and CBS domains
JNE32_07925	COG2340	Cysteine-rich secretory protein family
JNE32_07940	COG3679	Belongs to the UPF0342 family
JNE32_07945	COG4471	UPF0298 protein
JNE32_07950	COG0742	ribosomal rna small subunit methyltransferase
JNE32_07955	COG0669	Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate
JNE32_07960	COG3314	Sporulation integral membrane protein YlbJ
JNE32_07965	COG1752	Esterase of the alpha-beta hydrolase superfamily
JNE32_07970	COG3480	Lon protease (S16) C-terminal proteolytic domain
JNE32_07975	COG1323	Belongs to the UPF0348 family
JNE32_07985	COG1399	metal-binding, possibly nucleic acid-binding protein
JNE32_08000	COG0454	-acetyltransferase
JNE32_08005	COG1893	Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
JNE32_08010	COG4365	Involved in bacillithiol (BSH) biosynthesis. May catalyze the last step of the pathway, the addition of cysteine to glucosamine malate (GlcN-Mal) to generate BSH
JNE32_08015	COG2001	Belongs to the MraZ family
JNE32_08020	COG0275	rRNA processing
JNE32_08025	COG4839	cell division protein FtsL
JNE32_08030	COG0768	penicillin binding
JNE32_08035	COG0768	penicillin binding
JNE32_08040	COG0769	Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
JNE32_08045	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
JNE32_08050	COG0771	Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA)
JNE32_08055	COG0772	Belongs to the SEDS family
JNE32_08060	COG0707	Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
JNE32_08065	COG0812	UDP-N-acetylmuramate dehydrogenase activity
JNE32_08070	COG1589	Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic. May control correct divisome assembly
JNE32_08075	COG3879	Bacterial protein of unknown function (DUF881)
JNE32_08080	COG3879	Bacterial protein of unknown function (DUF881)
JNE32_08085	COG3856	small basic protein
JNE32_08090	COG0849	cell division
JNE32_08095	COG0206	Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
JNE32_08100	COG4412	M6 family metalloprotease domain protein
JNE32_08100	COG1404	Belongs to the peptidase S8 family
JNE32_08110	COG1191	sigma factor activity
JNE32_08115	COG1191	sigma factor activity
JNE32_08120	COG1119	ATPase activity
JNE32_08125	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
JNE32_08130	COG1873	PFAM PRC-barrel domain
JNE32_08135	COG1496	oxidoreductase activity
JNE32_08140	COG0325	Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis
JNE32_08145	COG1799	cell septum assembly
JNE32_08150	COG0762	integral membrane protein
JNE32_08155	COG2302	S4 RNA-binding domain
JNE32_08160	COG3599	regulation of cell shape
JNE32_08165	COG0060	amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)
JNE32_08170	COG1734	Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters
JNE32_08175	COG0597	This protein specifically catalyzes the removal of signal peptides from prolipoproteins
JNE32_08180	COG0564	pseudouridine synthase activity
JNE32_08185	COG2065	Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant
JNE32_08190	COG2233	PERMEase
JNE32_08195	COG0540	Belongs to the ATCase OTCase family
JNE32_08200	COG0044	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides
JNE32_08205	COG0505	Belongs to the CarA family
JNE32_08210	COG0458	carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity
JNE32_08215	COG0543	2 iron, 2 sulfur cluster binding
JNE32_08220	COG0167	dihydroorotate dehydrogenase activity
JNE32_08225	COG0284	orotidine-5'-phosphate decarboxylase activity
JNE32_08230	COG0461	Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)
JNE32_08235	COG0175	sulfate reduction
JNE32_08240	COG0306	phosphate transporter
JNE32_08245	COG2046	Belongs to the sulfate adenylyltransferase family
JNE32_08250	COG0529	Catalyzes the synthesis of activated sulfate
JNE32_08260	COG2138	Cobalamin (vitamin B12) biosynthesis CbiX protein
JNE32_08265	COG1648	precorrin-2 dehydrogenase activity
JNE32_08270	COG1293	RNA-binding protein homologous to eukaryotic snRNP
JNE32_08275	COG0474	ATPase, P-type transporting, HAD superfamily, subfamily IC
JNE32_08280	COG1561	YicC-like family, N-terminal region
JNE32_08290	COG0194	GDP metabolic process
JNE32_08295	COG1758	RNA polymerase activity
JNE32_08300	COG0452	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
JNE32_08305	COG1198	Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
JNE32_08310	COG0242	peptide deformylase activity
JNE32_08315	COG0223	Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
JNE32_08320	COG0144	Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
JNE32_08320	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
JNE32_08325	COG0820	rRNA (adenine-C2-)-methyltransferase activity
JNE32_08330	COG0631	protein serine/threonine phosphatase activity
JNE32_08335	COG2815	serine threonine protein kinase
JNE32_08335	COG0515	serine threonine protein kinase
JNE32_08340	COG1162	GTPase activity
JNE32_08345	COG0036	Belongs to the ribulose-phosphate 3-epimerase family
JNE32_08350	COG1564	THIamine pyrophosphokinase
JNE32_08360	COG0227	Belongs to the bacterial ribosomal protein bL28 family
JNE32_08365	COG1302	Protein conserved in bacteria
JNE32_08370	COG1461	Dihydroxyacetone kinase
JNE32_08375	COG1760	l-serine dehydratase
JNE32_08380	COG1760	l-serine dehydratase
JNE32_08385	COG1200	Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
JNE32_08390	COG2050	protein possibly involved in aromatic compounds catabolism
JNE32_08390	COG1349	DNA-binding transcription factor activity
JNE32_08395	COG0416	fatty acid biosynthetic process
JNE32_08400	COG0331	[acyl-carrier-protein] S-malonyltransferase activity
JNE32_08405	COG1028	Short-chain dehydrogenase reductase Sdr
JNE32_08415	COG0571	ribonuclease III activity
JNE32_08420	COG1196	nuclear chromosome segregation
JNE32_08425	COG0552	protein localization to endoplasmic reticulum
JNE32_08435	COG2739	Might take part in the signal recognition particle (SRP) pathway. This is inferred from the conservation of its genetic proximity to ftsY ffh. May be a regulatory protein
JNE32_08440	COG0541	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
JNE32_08445	COG0228	four-way junction DNA binding
JNE32_08450	COG1837	Belongs to the UPF0109 family
JNE32_08460	COG0806	An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes
JNE32_08465	COG0336	Belongs to the RNA methyltransferase TrmD family
JNE32_08470	COG0335	large ribosomal subunit rRNA binding
JNE32_08475	COG1161	Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity
JNE32_08480	COG0164	Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
JNE32_08490	COG2257	FlhB HrpN YscU SpaS Family
JNE32_08495	COG0045	succinate-CoA ligase (ADP-forming) activity
JNE32_08500	COG0074	Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit
JNE32_08505	COG0758	DNA mediated transformation
JNE32_08510	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
JNE32_08515	COG1206	Catalyzes the folate-dependent formation of 5-methyl- uridine at position 54 (M-5-U54) in all tRNAs
JNE32_08520	COG4974	Belongs to the 'phage' integrase family
JNE32_08525	COG5405	Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery
JNE32_08530	COG1220	this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis
JNE32_08535	COG4465	DNA-binding protein that represses the expression of many genes that are induced as cells make the transition from rapid exponential growth to stationary phase. It is a GTP-binding protein that senses the intracellular GTP concentration as an indicator of nutritional limitations. At low GTP concentration it no longer binds GTP and stop to act as a transcriptional repressor
JNE32_08540	COG1815	bacterial-type flagellum-dependent cell motility
JNE32_08545	COG1558	bacterial-type flagellum-dependent cell motility
JNE32_08550	COG1677	Flagellar hook-basal body complex protein FliE
JNE32_08555	COG1766	The M ring may be actively involved in energy transduction
JNE32_08560	COG1536	FliG is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
JNE32_08565	COG1317	bacterial-type flagellum organization
JNE32_08570	COG1157	protein secretion by the type III secretion system
JNE32_08575	COG2882	bacterial-type flagellum organization
JNE32_08580	COG3334	PFAM MgtE intracellular
JNE32_08585	COG3144	bacterial-type flagellum assembly
JNE32_08590	COG1843	Required for flagellar hook formation. May act as a scaffolding protein
JNE32_08595	COG4786	Flagellar basal body rod
JNE32_08600	COG1582	Flagellar protein (FlbD)
JNE32_08605	COG1580	Controls the rotational direction of flagella during chemotaxis
JNE32_08610	COG1868	FliM is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
JNE32_08615	COG1776	CheC inhibitor of MCP methylation
JNE32_08615	COG1886	FliN is one of three proteins (FliG, FliN, FliM) that form the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
JNE32_08620	COG2201	protein-glutamate methylesterase activity
JNE32_08625	COG3190	flagellar
JNE32_08630	COG1338	Plays a role in the flagellum-specific transport system
JNE32_08635	COG1987	bacterial-type flagellum assembly
JNE32_08640	COG1684	flagellar biosynthetic protein fliR
JNE32_08645	COG1377	Required for formation of the rod structure in the basal body of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin
JNE32_08650	COG1298	Required for formation of the rod structure of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin
JNE32_08655	COG1419	protein localization to endoplasmic reticulum
JNE32_08660	COG0455	bacterial-type flagellum organization
JNE32_08665	COG2201	protein-glutamate methylesterase activity
JNE32_08670	COG0643	Histidine kinase
JNE32_08670	COG2198	Histidine kinase
JNE32_08675	COG0835	chemotaxis
JNE32_08680	COG1776	CheC inhibitor of MCP methylation
JNE32_08685	COG1871	Probably deamidates glutamine residues to glutamate on methyl-accepting chemotaxis receptors (MCPs), playing an important role in chemotaxis
JNE32_08690	COG1191	sigma factor activity
JNE32_08700	COG0052	Belongs to the universal ribosomal protein uS2 family
JNE32_08705	COG0264	Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome
JNE32_08710	COG0528	UMP kinase activity
JNE32_08715	COG0233	cytoplasmic translational termination
JNE32_08720	COG0020	Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
JNE32_08725	COG4589	Belongs to the CDS family
JNE32_08730	COG0743	1-deoxy-D-xylulose-5-phosphate reductoisomerase activity
JNE32_08735	COG0750	zinc metalloprotease
JNE32_08740	COG0442	prolyl-tRNA aminoacylation
JNE32_08745	COG2176	DNA-directed DNA polymerase activity
JNE32_08750	COG0779	Required for maturation of 30S ribosomal subunits
JNE32_08755	COG0195	Participates in both transcription termination and antitermination
JNE32_08760	COG2740	Nucleic-acid-binding protein implicated in transcription termination
JNE32_08765	COG1358	cellular component organization or biogenesis
JNE32_08770	COG0532	One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex
JNE32_08775	COG1550	Protein conserved in bacteria
JNE32_08780	COG0858	One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA
JNE32_08785	COG0130	Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs
JNE32_08790	COG0196	riboflavin kinase activity
JNE32_08795	COG0184	Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome
JNE32_08800	COG1185	polyribonucleotide nucleotidyltransferase activity
JNE32_08805	COG0726	polysaccharide deacetylase
JNE32_08810	COG0612	Peptidase, M16
JNE32_08815	COG1873	PFAM PRC-barrel domain
JNE32_08820	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
JNE32_08825	COG0452	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
JNE32_08830	COG0136	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
JNE32_08835	COG0527	aspartate kinase activity
JNE32_08840	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
JNE32_08845	COG0595	An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
JNE32_08850	COG0740	serine-type endopeptidase activity
JNE32_08860	COG4980	gas vesicle protein
JNE32_08860	COG1674	ftsk spoiiie
JNE32_08865	COG2188	Transcriptional regulator
JNE32_08870	COG2814	Major facilitator Superfamily
JNE32_08875	COG0612	Peptidase, M16
JNE32_08880	COG0612	Peptidase, M16
JNE32_08885	COG0300	oxidoreductase activity
JNE32_08900	COG1426	Protein conserved in bacteria
JNE32_08905	COG0558	Belongs to the CDP-alcohol phosphatidyltransferase class-I family
JNE32_08910	COG1546	Belongs to the CinA family
JNE32_08910	COG1058	Belongs to the CinA family
JNE32_08915	COG0468	Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage
JNE32_08920	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
JNE32_08925	COG1418	mRNA catabolic process
JNE32_08930	COG1692	metallophosphoesterase
JNE32_08935	COG2359	stage V sporulation protein S
JNE32_08940	COG1063	alcohol dehydrogenase
JNE32_08945	COG0156	8-amino-7-oxononanoate synthase activity
JNE32_08950	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
JNE32_08955	COG4550	Control of competence regulator ComK, YlbF/YmcA
JNE32_08965	COG0249	that it carries out the mismatch recognition step. This protein has a weak ATPase activity
JNE32_08985	COG3226	Transcriptional regulator
JNE32_08990	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
JNE32_09000	COG0331	[acyl-carrier-protein] S-malonyltransferase activity
JNE32_09005	COG3321	synthase
JNE32_09010	COG0331	[acyl-carrier-protein] S-malonyltransferase activity
JNE32_09010	COG2070	2-Nitropropane dioxygenase
JNE32_09015	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
JNE32_09020	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
JNE32_09025	COG3425	synthase
JNE32_09030	COG1024	Enoyl-CoA hydratase
JNE32_09035	COG1024	Enoyl-CoA hydratase
JNE32_09040	COG0300	oxidoreductase activity
JNE32_09040	COG0318	PFAM AMP-dependent synthetase and ligase
JNE32_09040	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
JNE32_09040	COG3321	synthase
JNE32_09040	COG1028	Short-chain dehydrogenase reductase Sdr
JNE32_09045	COG4221	oxidoreductase activity
JNE32_09045	COG3321	synthase
JNE32_09045	COG0300	oxidoreductase activity
JNE32_09045	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
JNE32_09050	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
JNE32_09050	COG1028	Short-chain dehydrogenase reductase Sdr
JNE32_09050	COG3321	synthase
JNE32_09050	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
JNE32_09050	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
JNE32_09055	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
JNE32_09055	COG4221	oxidoreductase activity
JNE32_09055	COG3321	synthase
JNE32_09055	COG1028	Short-chain dehydrogenase reductase Sdr
JNE32_09060	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
JNE32_09060	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
JNE32_09060	COG3319	amino acid activation for nonribosomal peptide biosynthetic process
JNE32_09060	COG3321	synthase
JNE32_09065	COG2124	cytochrome p450
JNE32_09075	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
JNE32_09080	COG1404	Belongs to the peptidase S8 family
JNE32_09090	COG4195	phage-related replication protein
JNE32_09095	COG1764	response to oxidative stress
JNE32_09100	COG2076	Multidrug Resistance protein
JNE32_09105	COG2076	Multidrug Resistance protein
JNE32_09120	COG0324	Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A)
JNE32_09125	COG1923	regulation of RNA biosynthetic process
JNE32_09140	COG1780	Probably involved in ribonucleotide reductase function
JNE32_09145	COG0209	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
JNE32_09150	COG0208	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
JNE32_09155	COG4112	unkown
JNE32_09160	COG0860	N-Acetylmuramoyl-L-alanine amidase
JNE32_09165	COG0464	growth
JNE32_09170	COG2262	GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
JNE32_09175	COG4100	CystaTHIonine beta-lyase family protein involved in aluminum resistance
JNE32_09180	COG0789	Transcriptional regulator
JNE32_09185	COG0174	glutamine synthetase
JNE32_09190	COG4974	Belongs to the 'phage' integrase family
JNE32_09210	COG3646	Phage regulatory protein
JNE32_09210	COG3645	SOS response
JNE32_09385	COG5280	Phage tail tape measure protein TP901
JNE32_09385	COG3953	SLT domain
JNE32_09395	COG1705	Flagellar rod assembly protein muramidase FlgJ
JNE32_09440	COG3409	Peptidoglycan-binding domain 1 protein
JNE32_09440	COG5632	N-Acetylmuramoyl-L-alanine amidase
JNE32_09440	COG1388	LysM domain
JNE32_09450	COG5444	nuclease activity
JNE32_09505	COG1598	PFAM Uncharacterised protein family UPF0150
JNE32_09590	COG0463	Glycosyl transferase, family 2
JNE32_09605	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
JNE32_09620	COG3655	Transcriptional regulator
JNE32_09635	COG0135	phosphoribosylanthranilate isomerase activity
JNE32_09650	COG2211	Major facilitator Superfamily
JNE32_09655	COG3507	Belongs to the glycosyl hydrolase 43 family
JNE32_09660	COG1940	carbohydrate kinase activity
JNE32_09665	COG2115	Belongs to the xylose isomerase family
JNE32_09670	COG1070	Carbohydrate kinase
JNE32_09675	COG1525	nuclease
JNE32_09680	COG2814	Major facilitator Superfamily
JNE32_09685	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
JNE32_09695	COG0756	dUTP diphosphatase activity
JNE32_09735	COG1826	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
JNE32_09745	COG3832	glyoxalase III activity
JNE32_09795	COG4195	phage-related replication protein
JNE32_09805	COG0346	lactoylglutathione lyase activity
JNE32_09810	COG1974	Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
JNE32_09815	COG1388	LysM domain
JNE32_09820	COG1961	COG1961 Site-specific recombinases, DNA invertase Pin homologs
JNE32_09825	COG4224	UPF0291 protein
JNE32_09830	COG0021	Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate
JNE32_09840	COG3763	UPF0154 protein
JNE32_09850	COG0785	Cytochrome C biogenesis protein
JNE32_09855	COG2201	protein-glutamate methylesterase activity
JNE32_09860	COG4846	Membrane protein involved in cytochrome C biogenesis
JNE32_09870	COG0071	Belongs to the small heat shock protein (HSP20) family
JNE32_09885	COG1048	Catalyzes the isomerization of citrate to isocitrate via cis-aconitate
JNE32_09890	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
JNE32_09910	COG0824	Thioesterase
JNE32_09920	COG4841	protein insertion into membrane
JNE32_09925	COG0344	acyl-phosphate glycerol-3-phosphate acyltransferase activity
JNE32_09930	COG1832	CoA-binding protein
JNE32_09935	COG0187	DNA topoisomerase II activity
JNE32_09950	COG1115	amino acid carrier protein
JNE32_09965	COG5520	Belongs to the glycosyl hydrolase 30 family
JNE32_09970	COG3507	Belongs to the glycosyl hydrolase 43 family
JNE32_09975	COG2246	polysaccharide biosynthetic process
JNE32_09980	COG1210	Utp--glucose-1-phosphate uridylyltransferase
JNE32_09985	COG0586	Pfam SNARE associated Golgi protein
JNE32_09990	COG2404	hydrolase activity, acting on ester bonds
JNE32_09995	COG4799	Acetyl-CoA carboxylase, carboxyltransferase component subunits alpha and beta
JNE32_10000	COG1024	Enoyl-CoA hydratase
JNE32_10005	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
JNE32_10010	COG0511	ligase activity, forming carbon-carbon bonds
JNE32_10015	COG0439	Biotin carboxylase
JNE32_10020	COG0318	PFAM AMP-dependent synthetase and ligase
JNE32_10025	COG1960	acyl-CoA dehydrogenase activity
JNE32_10040	COG1649	PFAM Uncharacterised BCR, COG1649
JNE32_10050	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
JNE32_10050	COG3319	amino acid activation for nonribosomal peptide biosynthetic process
JNE32_10055	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
JNE32_10060	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
JNE32_10065	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
JNE32_10070	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
JNE32_10075	COG2027	D-alanyl-D-alanine carboxypeptidase
JNE32_10080	COG2017	converts alpha-aldose to the beta-anomer
JNE32_10085	COG0534	Mate efflux family protein
JNE32_10100	COG0582	viral genome integration into host DNA
JNE32_10105	COG0166	Belongs to the GPI family
JNE32_10110	COG0405	Gamma-glutamyltransferase
JNE32_10115	COG0583	DNA-binding transcription factor activity
JNE32_10120	COG0604	alcohol dehydrogenase
JNE32_10125	COG0493	'glutamate synthase
JNE32_10130	COG0067	glutamate synthase
JNE32_10130	COG0069	glutamate synthase activity
JNE32_10130	COG0070	glutamate synthase
JNE32_10135	COG0583	DNA-binding transcription factor activity
JNE32_10140	COG0263	Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate
JNE32_10145	COG0345	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
JNE32_10155	COG0300	oxidoreductase activity
JNE32_10160	COG4768	protein containing a divergent version of the methyl-accepting chemotaxis-like domain
JNE32_10170	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
JNE32_10190	COG2814	Major facilitator Superfamily
JNE32_10195	COG1070	Carbohydrate kinase
JNE32_10200	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
JNE32_10205	COG0243	molybdopterin cofactor binding
JNE32_10235	COG0840	transmembrane signaling receptor activity
JNE32_10235	COG5278	phosphoserine phosphatase activity
JNE32_10240	COG2368	4-hydroxyphenylacetate
JNE32_10245	COG4305	rare lipoprotein A
JNE32_10250	COG3619	membrane
JNE32_10255	COG3866	Pectate lyase
JNE32_10260	COG2135	peptidase activity
JNE32_10270	COG2140	Oxalate decarboxylase
JNE32_10280	COG0456	acetyltransferase
JNE32_10300	COG2720	vancomycin resistance protein
JNE32_10310	COG3655	Transcriptional regulator
JNE32_10315	COG3739	integral membrane protein
JNE32_10320	COG0583	DNA-binding transcription factor activity
JNE32_10325	COG0697	spore germination
JNE32_10335	COG0693	protein deglycase activity
JNE32_10340	COG2367	Beta-lactamase
JNE32_10360	COG3848	Pyruvate phosphate dikinase
JNE32_10360	COG0574	Belongs to the PEP-utilizing enzyme family
JNE32_10365	COG0726	polysaccharide deacetylase
JNE32_10370	COG2314	TM2 domain
JNE32_10375	COG1396	sequence-specific DNA binding
JNE32_10530	COG5444	nuclease activity
JNE32_10535	COG4282	regulation of fungal-type cell wall biogenesis
JNE32_10540	COG1231	oxidoreductase activity
JNE32_10545	COG0582	viral genome integration into host DNA
JNE32_10585	COG5632	N-Acetylmuramoyl-L-alanine amidase
JNE32_10630	COG5280	Phage tail tape measure protein TP901
JNE32_10630	COG3953	SLT domain
JNE32_10705	COG3953	SLT domain
JNE32_10705	COG5280	Phage tail tape measure protein TP901
JNE32_10760	COG3646	Phage regulatory protein
JNE32_10760	COG3645	SOS response
JNE32_10775	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
JNE32_10780	COG0662	Cupin 2, conserved barrel domain protein
JNE32_10780	COG2207	Transcriptional regulator
JNE32_10785	COG0456	acetyltransferase
JNE32_10790	COG1309	transcriptional regulator
JNE32_10795	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
JNE32_10800	COG3708	Transcriptional regulator
JNE32_10805	COG2378	regulation of single-species biofilm formation
JNE32_10815	COG0640	Transcriptional regulator
JNE32_10820	COG0741	lytic transglycosylase activity
JNE32_10825	COG2322	membrane
JNE32_10845	COG3239	Fatty acid desaturase
JNE32_10850	COG4585	Histidine kinase
JNE32_10855	COG2197	response regulator
JNE32_10860	COG3584	3D domain protein
JNE32_10860	COG1388	LysM domain
JNE32_10865	COG0514	ATP-dependent DNA helicase (RecQ)
JNE32_10875	COG1182	Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity
JNE32_10880	COG1734	Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters
JNE32_10895	COG0071	Belongs to the small heat shock protein (HSP20) family
JNE32_10920	COG1012	belongs to the aldehyde dehydrogenase family
JNE32_10930	COG0605	Destroys radicals which are normally produced within the cells and which are toxic to biological systems
JNE32_10935	COG0733	neurotransmitter:sodium symporter activity
JNE32_10940	COG0385	Bile acid
JNE32_10945	COG0508	dehydrogenase complex catalyzes the overall conversion of
JNE32_10950	COG0567	Dehydrogenase, E1 component
JNE32_10955	COG4548	von Willebrand factor, type A
JNE32_10960	COG0714	Associated with various cellular activities
JNE32_10965	COG2032	superoxide dismutase activity
JNE32_10970	COG0791	NLP P60 protein
JNE32_10970	COG1388	LysM domain
JNE32_10975	COG1819	glycosyl
JNE32_10980	COG1624	Catalyzes the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria
JNE32_10985	COG0534	Mate efflux family protein
JNE32_10990	COG1366	Belongs to the anti-sigma-factor antagonist family
JNE32_10995	COG2120	A mycothiol (MSH, N-acetylcysteinyl-glucosaminyl- inositol) S-conjugate amidase, it recycles conjugated MSH to the N-acetyl cysteine conjugate (AcCys S-conjugate, a mercapturic acid) and the MSH precursor. Involved in MSH-dependent detoxification of a number of alkylating agents and antibiotics
JNE32_11000	COG2120	A mycothiol (MSH, N-acetylcysteinyl-glucosaminyl- inositol) S-conjugate amidase, it recycles conjugated MSH to the N-acetyl cysteine conjugate (AcCys S-conjugate, a mercapturic acid) and the MSH precursor. Involved in MSH-dependent detoxification of a number of alkylating agents and antibiotics
JNE32_11010	COG2962	Rard protein
JNE32_11025	COG2610	gluconate transmembrane transporter activity
JNE32_11030	COG1942	4-Oxalocrotonate Tautomerase
JNE32_11035	COG1733	regulation of RNA biosynthetic process
JNE32_11040	COG0778	Nitroreductase
JNE32_11045	COG0400	carboxylic ester hydrolase activity
JNE32_11050	COG0346	lactoylglutathione lyase activity
JNE32_11060	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
JNE32_11065	COG0793	Belongs to the peptidase S41A family
JNE32_11065	COG3409	Peptidoglycan-binding domain 1 protein
JNE32_11070	COG2226	methyltransferase
JNE32_11080	COG1876	peptidase activity
JNE32_11085	COG0813	purine-nucleoside phosphorylase activity
JNE32_11100	COG0671	phosphoesterase, PA-phosphatase related
JNE32_11120	COG4479	Belongs to the UPF0346 family
JNE32_11140	COG3331	DNA recombination
JNE32_11215	COG0262	Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis
JNE32_11245	COG0756	dUTP diphosphatase activity
JNE32_11260	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
JNE32_11285	COG1372	Participates in initiation and elongation during chromosome replication
JNE32_11285	COG0209	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
JNE32_11290	COG1780	Probably involved in ribonucleotide reductase function
JNE32_11395	COG0125	Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
JNE32_11420	COG3584	3D domain protein
JNE32_11425	COG0587	DNA-directed DNA polymerase activity
JNE32_11430	COG0608	single-stranded DNA 5'-3' exodeoxyribonuclease activity
JNE32_11435	COG0358	DNA primase activity
JNE32_11440	COG0305	Participates in initiation and elongation during chromosome replication
JNE32_11450	COG2887	Belongs to the helicase family. UvrD subfamily
JNE32_11485	COG2135	peptidase activity
JNE32_11490	COG1793	dna ligase
JNE32_11565	COG3645	SOS response
JNE32_11565	COG3646	Phage regulatory protein
JNE32_11610	COG3655	Transcriptional regulator
JNE32_11625	COG0582	viral genome integration into host DNA
JNE32_11715	COG0210	DNA helicase
JNE32_11775	COG0776	regulation of translation
JNE32_11815	COG4373	Mu-like prophage FluMu protein gp28
JNE32_11915	COG0582	viral genome integration into host DNA
JNE32_11935	COG0739	heme binding
JNE32_11935	COG1196	nuclear chromosome segregation
JNE32_11935	COG0741	lytic transglycosylase activity
JNE32_11945	COG2433	Pfam Transposase IS66
JNE32_11960	COG5632	N-Acetylmuramoyl-L-alanine amidase
JNE32_11975	COG0457	Tetratricopeptide repeat
JNE32_11985	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
JNE32_12010	COG5444	nuclease activity
JNE32_12015	COG4282	regulation of fungal-type cell wall biogenesis
JNE32_12025	COG1525	nuclease
JNE32_12035	COG1961	COG1961 Site-specific recombinases, DNA invertase Pin homologs
JNE32_12040	COG1509	lysine 2,3-aminomutase activity
JNE32_12045	COG0456	acetyltransferase
JNE32_12050	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
JNE32_12055	COG2057	Acyl CoA acetate 3-ketoacid CoA transferase beta subunit
JNE32_12060	COG1788	Acyl CoA acetate 3-ketoacid CoA transferase, alpha subunit
JNE32_12065	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
JNE32_12080	COG0456	acetyltransferase
JNE32_12085	COG0463	Glycosyl transferase, family 2
JNE32_12100	COG4641	Protein conserved in bacteria
JNE32_12105	COG4247	3-phytase (myo-inositol-hexaphosphate 3-phosphohydrolase)
JNE32_12110	COG1086	Polysaccharide biosynthesis protein
JNE32_12115	COG0229	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
JNE32_12120	COG0225	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
JNE32_12125	COG1846	Transcriptional regulator
JNE32_12130	COG0534	Mate efflux family protein
JNE32_12140	COG4698	Protein conserved in bacteria
JNE32_12145	COG2755	lipolytic protein G-D-S-L family
JNE32_12150	COG1999	signal sequence binding
JNE32_12160	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
JNE32_12165	COG1221	Transcriptional regulators containing an AAA-type ATPase domain and a DNA-binding domain
JNE32_12170	COG1272	protein, Hemolysin III
JNE32_12175	COG0204	Acyl-transferase
JNE32_12180	COG0262	Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis
JNE32_12185	COG0207	Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis
JNE32_12190	COG1267	Lipid phosphatase which dephosphorylates phosphatidylglycerophosphate (PGP) to phosphatidylglycerol (PG)
JNE32_12200	COG2521	methyltransferase
JNE32_12200	COG2136	Putative SAM-dependent methyltransferase
JNE32_12210	COG0129	dihydroxy-acid dehydratase activity
JNE32_12215	COG1413	lyase activity
JNE32_12220	COG1418	mRNA catabolic process
JNE32_12225	COG0386	Belongs to the glutathione peroxidase family
JNE32_12230	COG1897	L-methionine biosynthetic process from homoserine via O-succinyl-L-homoserine and cystathionine
JNE32_12235	COG0707	Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
JNE32_12245	COG1278	Cold shock
JNE32_12265	COG0328	RNA-DNA hybrid ribonuclease activity
JNE32_12270	COG1738	Involved in the import of queuosine (Q) precursors, required for Q precursor salvage
JNE32_12275	COG0328	RNA-DNA hybrid ribonuclease activity
JNE32_12285	COG0258	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
JNE32_12300	COG0699	ATPase. Has a role at an early stage in the morphogenesis of the spore coat
JNE32_12310	COG1755	Isoprenylcysteine carboxyl methyltransferase
JNE32_12315	COG3424	synthase
JNE32_12320	COG2233	PERMEase
JNE32_12325	COG0503	Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
JNE32_12330	COG2317	Broad specificity carboxypetidase that releases amino acids sequentially from the C-terminus, including neutral, aromatic, polar and basic residues
JNE32_12340	COG0800	Aldolase
JNE32_12345	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
JNE32_12350	COG1609	Transcriptional regulator
JNE32_12355	COG3717	Catalyzes the isomerization of 5-dehydro-4-deoxy-D- glucuronate to 3-deoxy-D-glycero-2,5-hexodiulosonate
JNE32_12360	COG1028	Short-chain dehydrogenase reductase Sdr
JNE32_12365	COG1199	ATP-dependent helicase activity
JNE32_12380	COG0116	Belongs to the methyltransferase superfamily
JNE32_12395	COG4474	Belongs to the UPF0398 family
JNE32_12410	COG3359	exonuclease
JNE32_12415	COG1205	dead DEAH box helicase
JNE32_12415	COG1111	helicase
JNE32_12420	COG2190	(PTS) system
JNE32_12425	COG0071	Belongs to the small heat shock protein (HSP20) family
JNE32_12460	COG3331	DNA recombination
JNE32_12465	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
JNE32_12465	COG4499	WXG100 protein secretion system (Wss), protein YukC
JNE32_12475	COG0177	DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
JNE32_12480	COG3935	DnaD domain protein
JNE32_12485	COG0017	Asparaginyl-tRNA synthetase
JNE32_12490	COG0436	Aminotransferase
JNE32_12495	COG5353	protein conserved in bacteria
JNE32_12505	COG1199	ATP-dependent helicase activity
JNE32_12505	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
JNE32_12510	COG0853	Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine
JNE32_12515	COG0414	Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate
JNE32_12520	COG0413	3-methyl-2-oxobutanoate hydroxymethyltransferase activity
JNE32_12525	COG1654	Acts both as a biotin-- acetyl-CoA-carboxylase ligase and a biotin-operon repressor. In the presence of ATP, BirA activates biotin to form the BirA-biotinyl-5'-adenylate (BirA-bio- 5'-AMP or holoBirA) complex. HoloBirA can either transfer the biotinyl moiety to the biotin carboxyl carrier protein (BCCP) subunit of acetyl-CoA carboxylase, or bind to the biotin operator site and inhibit transcription of the operon
JNE32_12525	COG0340	biotin-[acetyl-CoA-carboxylase] ligase activity
JNE32_12530	COG0617	tRNA 3'-terminal CCA addition
JNE32_12535	COG0438	transferase activity, transferring glycosyl groups
JNE32_12540	COG2120	A mycothiol (MSH, N-acetylcysteinyl-glucosaminyl- inositol) S-conjugate amidase, it recycles conjugated MSH to the N-acetyl cysteine conjugate (AcCys S-conjugate, a mercapturic acid) and the MSH precursor. Involved in MSH-dependent detoxification of a number of alkylating agents and antibiotics
JNE32_12545	COG1803	Methylglyoxal synthase
JNE32_12550	COG0289	4-hydroxy-tetrahydrodipicolinate reductase
JNE32_12555	COG1694	Mazg nucleotide pyrophosphohydrolase
JNE32_12560	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
JNE32_12570	COG4347	Protein of unknown function (DUF1405)
JNE32_12575	COG2010	Cytochrome c
JNE32_12575	COG1290	Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis
JNE32_12580	COG1290	Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis
JNE32_12595	COG5582	Belongs to the UPF0302 family
JNE32_12600	COG0457	Tetratricopeptide repeat
JNE32_12605	COG0128	3-phosphoshikimate 1-carboxyvinyltransferase activity
JNE32_12610	COG0287	Prephenate dehydrogenase
JNE32_12615	COG0079	Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
JNE32_12620	COG0159	tryptophan synthase activity
JNE32_12625	COG0133	tryptophan synthase activity
JNE32_12630	COG0135	phosphoribosylanthranilate isomerase activity
JNE32_12640	COG0547	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
JNE32_12645	COG0147	Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
JNE32_12650	COG4401	Chorismate mutase type I
JNE32_12655	COG0337	Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ)
JNE32_12660	COG0082	Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system
JNE32_12665	COG1352	Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP
JNE32_12670	COG0105	UTP biosynthetic process
JNE32_12675	COG0142	geranyltranstransferase activity
JNE32_12680	COG2226	methyltransferase
JNE32_12685	COG0142	geranyltranstransferase activity
JNE32_12695	COG0302	gtp cyclohydrolase
JNE32_12700	COG0776	regulation of translation
JNE32_12705	COG0699	ATPase. Has a role at an early stage in the morphogenesis of the spore coat
JNE32_12720	COG0240	glycerol-3-phosphate dehydrogenase [NAD(P)+] activity
JNE32_12725	COG1160	GTP binding
JNE32_12750	COG1304	FMN binding
JNE32_12755	COG0539	negative regulation of cytoplasmic translation
JNE32_12760	COG0283	belongs to the cytidylate kinase family. Type 1 subfamily
JNE32_12770	COG5581	Acts as a flagellar brake, regulating swimming and swarming in a bis-(3'-5') cyclic diguanylic acid (c-di-GMP)- dependent manner. Binds 1 c-di-GMP dimer per subunit. Increasing levels of c-di-GMP lead to decreased motility
JNE32_12775	COG2959	enzyme of heme biosynthesis
JNE32_12780	COG3773	Cell wall hydrolase
JNE32_12780	COG3409	Peptidoglycan-binding domain 1 protein
JNE32_12785	COG2339	peptidase activity
JNE32_12790	COG0492	ferredoxin-NADP+ reductase activity
JNE32_12795	COG0334	Belongs to the Glu Leu Phe Val dehydrogenases family
JNE32_12800	COG4862	establishment of competence for transformation
JNE32_12805	COG1408	metallophosphoesterase
JNE32_12815	COG1388	LysM domain
JNE32_12820	COG1266	CAAX protease self-immunity
JNE32_12825	COG0514	ATP-dependent DNA helicase (RecQ)
JNE32_12830	COG4955	Helix-turn-helix domain
JNE32_12835	COG1141	Ferredoxin
JNE32_12840	COG3601	Mediates riboflavin uptake, may also transport FMN and roseoflavin. Probably a riboflavin-binding protein that interacts with the energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates. The substrates themselves are bound by transmembrane, not extracytoplasmic soluble proteins
JNE32_12845	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
JNE32_12850	COG0710	3-dehydroquinate dehydratase activity
JNE32_12860	COG1595	DNA-templated transcription, initiation
JNE32_12865	COG5002	protein histidine kinase activity
JNE32_12870	COG0745	RESPONSE REGULATOR receiver
JNE32_12875	COG0755	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
JNE32_12880	COG1333	cytochrome c biogenesis protein
JNE32_12885	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
JNE32_12890	COG1187	pseudouridine synthase activity
JNE32_12895	COG0700	Nucleoside recognition
JNE32_12900	COG2715	membrane protein required for spore maturation
JNE32_12905	COG1686	Belongs to the peptidase S11 family
JNE32_12915	COG1386	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves
JNE32_12920	COG1354	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves
JNE32_12925	COG1547	Domain of unknown function (DUF309)
JNE32_12930	COG0456	acetyltransferase
JNE32_12935	COG0054	6,7-dimethyl-8-ribityllumazine synthase activity
JNE32_12940	COG0807	Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
JNE32_12940	COG0108	Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
JNE32_12945	COG0307	riboflavin synthase, alpha
JNE32_12950	COG1985	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
JNE32_12950	COG0117	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
JNE32_12960	COG0681	Belongs to the peptidase S26 family
JNE32_12970	COG3478	Nucleic-acid-binding protein containing Zn-ribbon domain (DUF2082)
JNE32_12990	COG0652	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
JNE32_12995	COG4086	secreted protein
JNE32_13000	COG0019	diaminopimelate decarboxylase activity
JNE32_13005	COG0697	spore germination
JNE32_13020	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
JNE32_13040	COG1191	sigma factor activity
JNE32_13045	COG2172	sigma factor antagonist activity
JNE32_13050	COG1366	Belongs to the anti-sigma-factor antagonist family
JNE32_13055	COG1686	Belongs to the peptidase S11 family
JNE32_13060	COG0005	The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate
JNE32_13065	COG1015	Phosphotransfer between the C1 and C5 carbon atoms of pentose
JNE32_13070	COG4974	Belongs to the 'phage' integrase family
JNE32_13080	COG0735	belongs to the Fur family
JNE32_13085	COG1300	Membrane
JNE32_13095	COG0281	malic enzyme
JNE32_13100	COG1757	Na H antiporter
JNE32_13105	COG1027	Aspartate ammonia-lyase
JNE32_13110	COG0252	asparaginase activity
JNE32_13115	COG1396	sequence-specific DNA binding
JNE32_13120	COG1379	DNA repair
JNE32_13125	COG0494	nUDIX hydrolase
JNE32_13135	COG0667	Aldo Keto reductase
JNE32_13145	COG1073	alpha beta
JNE32_13155	COG4918	Iron-sulphur cluster biosynthesis
JNE32_13160	COG2320	Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A
JNE32_13160	COG0456	acetyltransferase
JNE32_13165	COG2329	Antibiotic biosynthesis monooxygenase
JNE32_13170	COG0456	acetyltransferase
JNE32_13180	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
JNE32_13190	COG2211	Major facilitator Superfamily
JNE32_13200	COG0346	lactoylglutathione lyase activity
JNE32_13205	COG1072	(Pantothenic acid kinase))
JNE32_13210	COG3048	D-serine ammonia-lyase activity
JNE32_13215	COG0300	oxidoreductase activity
JNE32_13220	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
JNE32_13225	COG0345	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
JNE32_13230	COG4187	Peptidase family M20/M25/M40
JNE32_13235	COG1902	pentaerythritol trinitrate reductase activity
JNE32_13240	COG0596	Alpha beta hydrolase
JNE32_13250	COG1234	tRNA 3'-trailer cleavage
JNE32_13255	COG0364	Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
JNE32_13260	COG0362	Catalyzes the oxidative decarboxylation of 6- phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH
JNE32_13265	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
JNE32_13275	COG0706	membrane insertase activity
JNE32_13280	COG3361	conserved protein (COG2071)
JNE32_13285	COG2195	Cleaves the N-terminal amino acid of tripeptides
JNE32_13290	COG4799	Acetyl-CoA carboxylase, carboxyltransferase component subunits alpha and beta
JNE32_13295	COG0346	lactoylglutathione lyase activity
JNE32_13305	COG1376	ErfK ybiS ycfS ynhG family protein
JNE32_13310	COG4129	membrane
JNE32_13315	COG1126	abc transporter atp-binding protein
JNE32_13320	COG0765	amino acid transport
JNE32_13325	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
JNE32_13335	COG1597	lipid kinase activity
JNE32_13340	COG2814	Major facilitator Superfamily
JNE32_13345	COG4978	Transcriptional regulator
JNE32_13345	COG0789	Transcriptional regulator
JNE32_13350	COG0508	dehydrogenase complex catalyzes the overall conversion of
JNE32_13355	COG0022	dehydrogenase e1 component
JNE32_13360	COG1071	oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor
JNE32_13365	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
JNE32_13370	COG3426	butyrate kinase activity
JNE32_13375	COG0334	Belongs to the Glu Leu Phe Val dehydrogenases family
JNE32_13380	COG0280	phosphate acetyltransferase
JNE32_13385	COG3829	transcription factor binding
JNE32_13385	COG3290	protein histidine kinase activity
JNE32_13395	COG2513	Catalyzes the thermodynamically favored C-C bond cleavage of (2R,3S)-2-methylisocitrate to yield pyruvate and succinate
JNE32_13400	COG2079	MmgE PrpD family protein
JNE32_13405	COG0372	Belongs to the citrate synthase family
JNE32_13410	COG1960	acyl-CoA dehydrogenase activity
JNE32_13415	COG1250	3-hydroxyacyl-CoA dehydrogenase
JNE32_13420	COG0183	Belongs to the thiolase family
JNE32_13425	COG0584	glycerophosphoryl diester phosphodiesterase
JNE32_13430	COG0860	N-Acetylmuramoyl-L-alanine amidase
JNE32_13445	COG1902	pentaerythritol trinitrate reductase activity
JNE32_13450	COG0745	RESPONSE REGULATOR receiver
JNE32_13455	COG0750	zinc metalloprotease
JNE32_13460	COG0497	DNA recombination
JNE32_13465	COG1438	arginine binding
JNE32_13470	COG1189	Ribosomal RNA methyltransferase RrmJ FtsJ
JNE32_13475	COG1154	Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP)
JNE32_13480	COG0142	geranyltranstransferase activity
JNE32_13485	COG1722	exodeoxyribonuclease VII activity
JNE32_13490	COG1570	exodeoxyribonuclease VII activity
JNE32_13495	COG0190	Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate
JNE32_13500	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
JNE32_13505	COG1302	Protein conserved in bacteria
JNE32_13510	COG0439	Biotin carboxylase
JNE32_13515	COG0511	ligase activity, forming carbon-carbon bonds
JNE32_13555	COG3854	ATPases associated with a variety of cellular activities
JNE32_13565	COG0231	Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
JNE32_13570	COG0006	proline dipeptidase activity
JNE32_13575	COG0757	Catalyzes a trans-dehydration via an enolate intermediate
JNE32_13585	COG3872	metal-dependent enzyme
JNE32_13595	COG1752	Esterase of the alpha-beta hydrolase superfamily
JNE32_13600	COG1321	iron dependent repressor
JNE32_13605	COG0095	Lipoate-protein ligase
JNE32_13610	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
JNE32_13615	COG1003	The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor
JNE32_13620	COG0403	The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor
JNE32_13625	COG0404	The glycine cleavage system catalyzes the degradation of glycine
JNE32_13630	COG0553	Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair
JNE32_13645	COG1396	sequence-specific DNA binding
JNE32_13655	COG0681	Belongs to the peptidase S26 family
JNE32_13680	COG4940	Competence protein ComGF
JNE32_13690	COG4970	Tfp pilus assembly protein FimT
JNE32_13695	COG4537	Required for transformation and DNA binding
JNE32_13700	COG1459	type II secretion system
JNE32_13710	COG0517	IMP dehydrogenase activity
JNE32_13715	COG0598	Magnesium transport protein CorA
JNE32_13720	COG1253	flavin adenine dinucleotide binding
JNE32_13725	COG1366	Belongs to the anti-sigma-factor antagonist family
JNE32_13735	COG1393	Belongs to the ArsC family
JNE32_13745	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
JNE32_13755	COG0011	TIGRFAM Protein of
JNE32_13765	COG2866	Carboxypeptidase
JNE32_13770	COG1368	sulfuric ester hydrolase activity
JNE32_13775	COG1940	carbohydrate kinase activity
JNE32_13780	COG4483	Protein conserved in bacteria
JNE32_13785	COG0705	Rhomboid family
JNE32_13785	COG0457	Tetratricopeptide repeat
JNE32_13795	COG0212	Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
JNE32_13805	COG0438	transferase activity, transferring glycosyl groups
JNE32_13820	COG1559	Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
JNE32_13825	COG1117	ATPase-coupled phosphate ion transmembrane transporter activity
JNE32_13830	COG1117	ATPase-coupled phosphate ion transmembrane transporter activity
JNE32_13835	COG0581	inorganic phosphate transmembrane transporter activity
JNE32_13840	COG0573	inorganic phosphate transmembrane transporter activity
JNE32_13845	COG0226	Part of the ABC transporter complex PstSACB involved in phosphate import
JNE32_13850	COG0768	penicillin binding
JNE32_13855	COG0477	Major facilitator Superfamily
JNE32_13860	COG0605	Destroys radicals which are normally produced within the cells and which are toxic to biological systems
JNE32_13865	COG2839	Protein conserved in bacteria
JNE32_13870	COG5521	maltodextrose utilization protein MalA
JNE32_13875	COG1388	LysM domain
JNE32_13880	COG0821	Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate
JNE32_13885	COG4709	membrane
JNE32_13890	COG5663	Belongs to the 5'(3')-deoxyribonucleotidase family
JNE32_13895	COG0735	belongs to the Fur family
JNE32_13900	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
JNE32_13910	COG0648	Endonuclease IV plays a role in DNA repair. It cleaves phosphodiester bonds at apurinic or apyrimidinic sites (AP sites) to produce new 5'-ends that are base-free deoxyribose 5-phosphate residues. It preferentially attacks modified AP sites created by bleomycin and neocarzinostatin
JNE32_13915	COG0513	Belongs to the DEAD box helicase family
JNE32_13925	COG0761	Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)- butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP MEP pathway for isoprenoid precursor biosynthesis
JNE32_13930	COG0327	Belongs to the GTP cyclohydrolase I type 2 NIF3 family
JNE32_13935	COG2384	SAM-dependent methyltransferase
JNE32_13940	COG2010	Cytochrome c
JNE32_13945	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
JNE32_13950	COG0358	DNA primase activity
JNE32_13955	COG1671	Belongs to the UPF0178 family
JNE32_13960	COG1806	Bifunctional serine threonine kinase and phosphorylase involved in the regulation of the
JNE32_13965	COG0517	IMP dehydrogenase activity
JNE32_13970	COG0751	glycine-tRNA ligase activity
JNE32_13975	COG0752	glycyl-tRNA synthetase alpha subunit
JNE32_13980	COG1381	Involved in DNA repair and RecF pathway recombination
JNE32_13990	COG1159	An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism
JNE32_13995	COG0295	cytidine deaminase activity
JNE32_14000	COG0818	Recycling of diacylglycerol produced during the turnover of membrane phospholipid
JNE32_14005	COG0319	Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA
JNE32_14010	COG1480	7TM receptor with intracellular HD hydrolase
JNE32_14015	COG1702	phosphate starvation-inducible protein PhoH
JNE32_14020	COG0561	phosphatase activity
JNE32_14035	COG4864	UPF0365 protein
JNE32_14040	COG1030	water channel activity
JNE32_14045	COG1610	YqeY-like protein
JNE32_14055	COG1283	sodium-dependent phosphate transmembrane transporter activity
JNE32_14060	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
JNE32_14065	COG1385	rRNA (uridine-N3-)-methyltransferase activity
JNE32_14070	COG2264	protein methyltransferase activity
JNE32_14075	COG0484	heat shock protein binding
JNE32_14080	COG0443	Heat shock 70 kDa protein
JNE32_14085	COG0576	Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ
JNE32_14090	COG1420	regulation of RNA biosynthetic process
JNE32_14095	COG0635	Involved in the biosynthesis of porphyrin-containing compound
JNE32_14100	COG0481	GTPase activity
JNE32_14110	COG0860	N-Acetylmuramoyl-L-alanine amidase
JNE32_14115	COG0680	Initiates the rapid degradation of small, acid-soluble proteins during spore germination
JNE32_14120	COG0268	Binds directly to 16S ribosomal RNA
JNE32_14125	COG1466	dna polymerase III delta subunit
JNE32_14140	COG2333	competence protein COMEC
JNE32_14140	COG0658	competence protein
JNE32_14145	COG2131	deaminase
JNE32_14150	COG1596	polysaccharide export
JNE32_14150	COG1555	photosystem II stabilization
JNE32_14155	COG0345	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
JNE32_14160	COG2226	methyltransferase
JNE32_14165	COG0799	negative regulation of ribosome biogenesis
JNE32_14170	COG1713	HD superfamily hydrolase involved in NAD metabolism
JNE32_14175	COG1057	Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD)
JNE32_14180	COG1534	Rna-binding protein
JNE32_14185	COG0169	Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA)
JNE32_14190	COG1161	Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity
JNE32_14195	COG2179	HAD superfamily (subfamily IIIA) phosphatase, TIGR01668
JNE32_14205	COG2755	lipolytic protein G-D-S-L family
JNE32_14210	COG3409	Peptidoglycan-binding domain 1 protein
JNE32_14210	COG5632	N-Acetylmuramoyl-L-alanine amidase
JNE32_14230	COG3209	COG3209 Rhs family protein
JNE32_14240	COG1961	COG1961 Site-specific recombinases, DNA invertase Pin homologs
JNE32_14245	COG0394	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
JNE32_14250	COG0798	PFAM Bile acid sodium symporter
JNE32_14255	COG0346	lactoylglutathione lyase activity
JNE32_14260	COG0640	Transcriptional regulator
JNE32_14265	COG3403	YqcI/YcgG family
JNE32_14285	COG0604	alcohol dehydrogenase
JNE32_14310	COG0457	Tetratricopeptide repeat
JNE32_14325	COG5444	nuclease activity
JNE32_14350	COG5632	N-Acetylmuramoyl-L-alanine amidase
JNE32_14350	COG3409	Peptidoglycan-binding domain 1 protein
JNE32_14355	COG4824	toxin secretion phage lysis holin
JNE32_14385	COG3778	Protein conserved in bacteria
JNE32_14390	COG3299	homolog of phage Mu protein gp47
JNE32_14395	COG3628	GPW Gp25 family protein
JNE32_14405	COG4193	domain, Protein
JNE32_14410	COG1652	LysM domain
JNE32_14415	COG5280	Phage tail tape measure protein TP901
JNE32_14415	COG3953	SLT domain
JNE32_14470	COG4653	Phage capsid family
JNE32_14475	COG0338	D12 class N6 adenine-specific DNA methyltransferase
JNE32_14485	COG2369	cell adhesion
JNE32_14490	COG5518	Phage portal protein
JNE32_14495	COG1783	phage Terminase large subunit
JNE32_14500	COG5484	DNA packaging
JNE32_14515	COG3677	Transposase
JNE32_14535	COG4570	Endonuclease that resolves Holliday junction intermediates made during homologous genetic recombination and DNA repair. Exhibits sequence and structure-selective cleavage of four-way DNA junctions, where it introduces symmetrical nicks in two strands of the same polarity at the 5' side of dinucleotides. Corrects the defects in genetic recombination and DNA repair associated with inactivation of ruvAB or ruvC
JNE32_14545	COG1484	DNA-dependent DNA replication
JNE32_14550	COG3935	DnaD domain protein
JNE32_14555	COG3723	Recombinational DNA repair protein, rece pathway
JNE32_14560	COG5377	YqaJ viral recombinase family
JNE32_14595	COG3620	sequence-specific DNA binding
JNE32_14605	COG0563	adenylate kinase activity
JNE32_14610	COG2856	Zn peptidase
JNE32_14620	COG0642	Histidine kinase
JNE32_14620	COG5002	protein histidine kinase activity
JNE32_14625	COG0745	RESPONSE REGULATOR receiver
JNE32_14630	COG2311	Membrane
JNE32_14640	COG0454	-acetyltransferase
JNE32_14645	COG2249	NAD(P)H dehydrogenase (quinone) activity
JNE32_14655	COG0730	response to heat
JNE32_14660	COG0425	Belongs to the sulfur carrier protein TusA family
JNE32_14665	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
JNE32_14665	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
JNE32_14675	COG0425	Belongs to the sulfur carrier protein TusA family
JNE32_14675	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
JNE32_14685	COG1937	Protein conserved in bacteria
JNE32_14695	COG0662	Cupin 2, conserved barrel domain protein
JNE32_14705	COG4978	Transcriptional regulator
JNE32_14705	COG0789	Transcriptional regulator
JNE32_14710	COG2814	Major facilitator Superfamily
JNE32_14715	COG0456	acetyltransferase
JNE32_14720	COG1253	flavin adenine dinucleotide binding
JNE32_14730	COG0697	spore germination
JNE32_14735	COG0583	DNA-binding transcription factor activity
JNE32_14740	COG2072	flavoprotein involved in K transport
JNE32_14745	COG1230	cation diffusion facilitator family transporter
JNE32_14750	COG1942	4-Oxalocrotonate Tautomerase
JNE32_14755	COG0583	DNA-binding transcription factor activity
JNE32_14770	COG1114	Component of the transport system for branched-chain amino acids
JNE32_14775	COG1687	branched-chain amino acid
JNE32_14780	COG1296	Branched-chain amino acid permease (Azaleucine resistance)
JNE32_14785	COG1522	sequence-specific DNA binding
JNE32_14795	COG2124	cytochrome p450
JNE32_14805	COG1335	isochorismatase
JNE32_14820	COG2318	DinB family
JNE32_14830	COG2070	2-Nitropropane dioxygenase
JNE32_14845	COG2186	Transcriptional regulator
JNE32_14860	COG1028	Short-chain dehydrogenase reductase Sdr
JNE32_14865	COG1154	Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP)
JNE32_14870	COG3959	Transketolase, thiamine diphosphate binding domain
JNE32_14880	COG4978	Transcriptional regulator
JNE32_14880	COG0789	Transcriptional regulator
JNE32_14885	COG2315	Protein conserved in bacteria
JNE32_14895	COG3443	Belongs to the bacterial solute-binding protein 9 family
JNE32_14900	COG1595	DNA-templated transcription, initiation
JNE32_14905	COG0667	Aldo Keto reductase
JNE32_14910	COG2851	Citrate transporter
JNE32_14915	COG0583	DNA-binding transcription factor activity
JNE32_14920	COG2828	Protein conserved in bacteria
JNE32_14925	COG3409	Peptidoglycan-binding domain 1 protein
JNE32_14930	COG5566	PFAM Mor transcription activator
JNE32_14935	COG0596	Alpha beta hydrolase
JNE32_14940	COG4991	sh3 domain protein
JNE32_14945	COG4991	sh3 domain protein
JNE32_14955	COG0346	lactoylglutathione lyase activity
JNE32_14965	COG5577	PFAM Coat F domain
JNE32_14970	COG1063	alcohol dehydrogenase
JNE32_14980	COG5577	PFAM Coat F domain
JNE32_14985	COG0789	Transcriptional regulator
JNE32_14995	COG1064	alcohol dehydrogenase
JNE32_15000	COG0693	protein deglycase activity
JNE32_15005	COG1621	beta-fructofuranosidase activity
JNE32_15010	COG3716	PTS system mannose fructose sorbose family IID component
JNE32_15015	COG3715	PTS system
JNE32_15020	COG3444	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
JNE32_15025	COG2893	phosphoenolpyruvate-dependent sugar phosphotransferase system
JNE32_15030	COG3933	PFAM sigma-54 factor interaction domain-containing protein
JNE32_15030	COG1221	Transcriptional regulators containing an AAA-type ATPase domain and a DNA-binding domain
JNE32_15040	COG1113	amino acid transport
JNE32_15045	COG1280	lysine exporter protein (LysE YggA)
JNE32_15050	COG1378	Sugar-specific transcriptional regulator TrmB
JNE32_15055	COG1595	DNA-templated transcription, initiation
JNE32_15075	COG0369	Component of the sulfite reductase complex that catalyzes the 6-electron reduction of sulfite to sulfide. This is one of several activities required for the biosynthesis of L- cysteine from sulfate. The flavoprotein component catalyzes the electron flow from NADPH - FAD - FMN to the hemoprotein component
JNE32_15075	COG2124	cytochrome p450
JNE32_15080	COG1309	transcriptional regulator
JNE32_15085	COG2226	methyltransferase
JNE32_15100	COG2116	formate transmembrane transporter activity
JNE32_15105	COG5609	conserved protein (DUF2294)
JNE32_15110	COG3383	formate dehydrogenase (NAD+) activity
JNE32_15115	COG2427	Protein of unknown function (DUF1641)
JNE32_15125	COG0626	cystathionine gamma-synthase activity
JNE32_15130	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
JNE32_15135	COG0775	Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
JNE32_15140	COG2226	methyltransferase
JNE32_15155	COG0768	penicillin binding
JNE32_15160	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
JNE32_15165	COG0572	uridine kinase
JNE32_15170	COG0826	peptidase U32
JNE32_15175	COG0826	peptidase U32
JNE32_15180	COG4122	O-methyltransferase activity
JNE32_15185	COG1559	Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
JNE32_15190	COG3906	Belongs to the UPF0473 family
JNE32_15195	COG0816	Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA
JNE32_15200	COG4472	Bacterial protein of unknown function (DUF965)
JNE32_15205	COG0013	Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
JNE32_15210	COG0628	permease
JNE32_15215	COG1126	abc transporter atp-binding protein
JNE32_15220	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
JNE32_15225	COG0765	amino acid transport
JNE32_15230	COG0765	amino acid transport
JNE32_15245	COG3881	PFAM PRC-barrel domain
JNE32_15250	COG0507	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD
JNE32_15255	COG0457	Tetratricopeptide repeat
JNE32_15260	COG0482	sulfurtransferase activity
JNE32_15265	COG1104	cysteine desulfurase activity
JNE32_15270	COG1959	2 iron, 2 sulfur cluster binding
JNE32_15275	COG2256	atpase related to the helicase subunit of the holliday junction resolvase
JNE32_15280	COG1179	involved in molybdopterin and THIamine biosynthesis family 1
JNE32_15290	COG0173	Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp Asn)
JNE32_15295	COG0124	histidyl-tRNA synthetase
JNE32_15305	COG0860	N-Acetylmuramoyl-L-alanine amidase
JNE32_15305	COG4991	sh3 domain protein
JNE32_15305	COG3103	Sh3 type 3 domain protein
JNE32_15310	COG1490	D-aminoacyl-tRNA deacylase activity
JNE32_15315	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
JNE32_15320	COG0503	Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
JNE32_15325	COG0608	single-stranded DNA 5'-3' exodeoxyribonuclease activity
JNE32_15325	COG4199	Single-strand DNA-specific exonuclease, C terminal domain
JNE32_15330	COG5416	Lipopolysaccharide assembly protein A domain
JNE32_15335	COG0490	domain, Protein
JNE32_15340	COG0341	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
JNE32_15340	COG0342	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
JNE32_15350	COG2244	polysaccharide biosynthetic process
JNE32_15355	COG2323	membrane
JNE32_15365	COG1862	Preprotein translocase
JNE32_15370	COG0343	queuine tRNA-ribosyltransferase activity
JNE32_15375	COG0809	Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA)
JNE32_15385	COG2255	four-way junction helicase activity
JNE32_15390	COG0632	four-way junction helicase activity
JNE32_15400	COG2814	Major facilitator Superfamily
JNE32_15405	COG0673	inositol 2-dehydrogenase activity
JNE32_15410	COG2112	serine threonine protein kinase
JNE32_15430	COG1115	amino acid carrier protein
JNE32_15435	COG0217	transcriptional regulatory protein
JNE32_15445	COG1388	LysM domain
JNE32_15450	COG0379	Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate
JNE32_15455	COG0157	Belongs to the NadC ModD family
JNE32_15460	COG0029	Catalyzes the oxidation of L-aspartate to iminoaspartate
JNE32_15465	COG1104	cysteine desulfurase activity
JNE32_15470	COG1827	regulation of RNA biosynthetic process
JNE32_15475	COG0077	Prephenate dehydratase
JNE32_15480	COG4492	Belongs to the UPF0735 family
JNE32_15485	COG0536	An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control
JNE32_15490	COG3290	protein histidine kinase activity
JNE32_15500	COG0211	Belongs to the bacterial ribosomal protein bL27 family
JNE32_15505	COG2868	ribosomal protein
JNE32_15510	COG0261	This protein binds to 23S rRNA in the presence of protein L20
JNE32_15515	COG1994	Peptidase M50
JNE32_15520	COG0739	heme binding
JNE32_15525	COG2894	cell division
JNE32_15530	COG0850	regulation of cytokinetic process
JNE32_15535	COG2891	Involved in formation of the rod shape of the cell. May also contribute to regulation of formation of penicillin-binding proteins
JNE32_15545	COG1077	Cell shape determining protein MreB Mrl
JNE32_15550	COG2003	Belongs to the UPF0758 family
JNE32_15555	COG0424	maF-like protein
JNE32_15565	COG1989	Cleaves type-4 fimbrial leader sequence and methylates the N-terminal (generally Phe) residue
JNE32_15570	COG0285	dihydrofolate synthase activity
JNE32_15575	COG0525	valine-tRNA ligase activity
JNE32_15585	COG2334	A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response
JNE32_15590	COG1388	LysM domain
JNE32_15595	COG0001	glutamate-1-semialdehyde 2,1-aminomutase activity
JNE32_15600	COG0113	porphobilinogen synthase activity
JNE32_15605	COG1587	Uroporphyrinogen-III synthase
JNE32_15610	COG0181	hydroxymethylbilane synthase activity
JNE32_15615	COG0755	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
JNE32_15620	COG0373	Catalyzes the NADPH-dependent reduction of glutamyl- tRNA(Glu) to glutamate 1-semialdehyde (GSA)
JNE32_15630	COG0218	Necessary for normal cell division and for the maintenance of normal septation
JNE32_15635	COG0466	ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner
JNE32_15640	COG0470	DNA polymerase III
JNE32_15640	COG1067	ATP-dependent peptidase activity
JNE32_15645	COG1219	ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP
JNE32_15650	COG0544	peptidyl-prolyl cis-trans isomerase activity
JNE32_15655	COG1477	protein flavinylation
JNE32_15655	COG0457	Tetratricopeptide repeat
JNE32_15660	COG0066	3-isopropylmalate dehydratase activity
JNE32_15665	COG0065	Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate
JNE32_15670	COG0473	3-isopropylmalate dehydrogenase activity
JNE32_15675	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
JNE32_15680	COG0059	Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate
JNE32_15685	COG0440	acetolactate synthase activity
JNE32_15690	COG0028	Belongs to the TPP enzyme family
JNE32_15700	COG0454	-acetyltransferase
JNE32_15705	COG3861	electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity
JNE32_15715	COG0622	Phosphoesterase
JNE32_15720	COG0127	Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions
JNE32_15725	COG0689	Phosphorolytic exoribonuclease that removes nucleotide residues following the -CCA terminus of tRNA and adds nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates
JNE32_15730	COG5401	PFAM Sporulation and spore germination
JNE32_15735	COG0796	Provides the (R)-glutamate required for cell wall biosynthesis
JNE32_15740	COG1846	Transcriptional regulator
JNE32_15745	COG2197	response regulator
JNE32_15750	COG0824	Thioesterase
JNE32_15755	COG0479	Belongs to the succinate dehydrogenase fumarate reductase iron-sulfur protein family
JNE32_15760	COG1053	succinate dehydrogenase
JNE32_15765	COG2009	succinate dehydrogenase
JNE32_15770	COG1719	4-vinyl reductase, 4VR
JNE32_15775	COG0527	aspartate kinase activity
JNE32_15780	COG0322	excinuclease ABC activity
JNE32_15785	COG3118	belongs to the thioredoxin family
JNE32_15790	COG3534	alpha-L-arabinofuranosidase
JNE32_15795	COG2025	fatty acid beta-oxidation using acyl-CoA dehydrogenase
JNE32_15800	COG2086	electron transfer activity
JNE32_15805	COG1024	Enoyl-CoA hydratase
JNE32_15810	COG1309	transcriptional regulator
JNE32_15815	COG0318	PFAM AMP-dependent synthetase and ligase
JNE32_15820	COG3766	membrane
JNE32_15825	COG1193	negative regulation of DNA recombination
JNE32_15830	COG1387	Histidinol phosphatase and related hydrolases of the PHP family
JNE32_15830	COG1796	DNA polymerase
JNE32_15835	COG1286	toxin biosynthetic process
JNE32_15840	COG3027	Activator of cell division through the inhibition of FtsZ GTPase activity, therefore promoting FtsZ assembly into bundles of protofilaments necessary for the formation of the division Z ring. It is recruited early at mid-cell but it is not essential for cell division
JNE32_15845	COG1039	Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
JNE32_15850	COG0072	phenylalanine-tRNA ligase activity
JNE32_15850	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
JNE32_15855	COG0016	Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily
JNE32_15865	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
JNE32_15875	COG3835	regulator
JNE32_15880	COG0277	FAD linked oxidase domain protein
JNE32_15885	COG0247	lactate metabolic process
JNE32_15890	COG0346	lactoylglutathione lyase activity
JNE32_15895	COG1966	Carbon starvation protein
JNE32_15900	COG3534	alpha-L-arabinofuranosidase
JNE32_15905	COG0395	ABC-type sugar transport system, permease component
JNE32_15910	COG1175	transmembrane transport
JNE32_15915	COG1653	transport
JNE32_15920	COG0371	Dehydrogenase
JNE32_15925	COG0647	UMP catabolic process
JNE32_15930	COG0235	Class ii aldolase
JNE32_15935	COG1069	ribulokinase activity
JNE32_15940	COG2160	L-arabinose isomerase activity
JNE32_15945	COG3507	Belongs to the glycosyl hydrolase 43 family
JNE32_15950	COG1363	Peptidase, m42
JNE32_15960	COG3326	Membrane
JNE32_15965	COG0292	Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit
JNE32_15970	COG0291	Belongs to the bacterial ribosomal protein bL35 family
JNE32_15975	COG0290	IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins
JNE32_15985	COG1346	cytolysis
JNE32_15990	COG1380	Effector of murein hydrolase LrgA
JNE32_15995	COG3279	Response regulator of the LytR AlgR family
JNE32_16000	COG3275	phosphorelay sensor kinase activity
JNE32_16005	COG1011	Hydrolase
JNE32_16010	COG0441	Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
JNE32_16020	COG0398	Pfam SNARE associated Golgi protein
JNE32_16025	COG1484	DNA-dependent DNA replication
JNE32_16030	COG3611	Membrane attachment protein
JNE32_16035	COG1327	Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes
JNE32_16040	COG1586	Catalyzes the decarboxylation of S-adenosylmethionine to S-adenosylmethioninamine (dcAdoMet), the propylamine donor required for the synthesis of the polyamines spermine and spermidine from the diamine putrescine
JNE32_16045	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
JNE32_16050	COG1733	regulation of RNA biosynthetic process
JNE32_16055	COG2814	Major facilitator Superfamily
JNE32_16060	COG0656	L-ascorbic acid biosynthetic process
JNE32_16065	COG0237	dephospho-CoA kinase activity
JNE32_16070	COG1971	Probably functions as a manganese efflux pump
JNE32_16075	COG0266	class I DNA-(apurinic or apyrimidinic site) endonuclease activity
JNE32_16080	COG0258	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
JNE32_16080	COG0749	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
JNE32_16085	COG5002	protein histidine kinase activity
JNE32_16090	COG0745	RESPONSE REGULATOR receiver
JNE32_16095	COG0039	L-malate dehydrogenase activity
JNE32_16100	COG0538	isocitrate dehydrogenase activity
JNE32_16105	COG0372	Belongs to the citrate synthase family
JNE32_16110	COG2707	UPF0756 membrane protein
JNE32_16115	COG0628	permease
JNE32_16120	COG3030	protein affecting phage T7 exclusion by the F plasmid
JNE32_16125	COG0469	pyruvate kinase activity
JNE32_16130	COG0205	6-phosphofructokinase activity
JNE32_16135	COG0825	malonyl-CoA metabolic process
JNE32_16140	COG0777	Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA
JNE32_16145	COG0281	malic enzyme
JNE32_16150	COG0587	DNA-directed DNA polymerase activity
JNE32_16170	COG0618	3'(2'),5'-bisphosphate nucleotidase activity
JNE32_16180	COG4109	DRTGG domain
JNE32_16185	COG0730	response to heat
JNE32_16190	COG1473	amidohydrolase
JNE32_16195	COG0196	riboflavin kinase activity
JNE32_16200	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
JNE32_16205	COG0695	Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins
JNE32_16210	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
JNE32_16215	COG1126	abc transporter atp-binding protein
JNE32_16220	COG0765	amino acid transport
JNE32_16225	COG0765	amino acid transport
JNE32_16230	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
JNE32_16235	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
JNE32_16240	COG0454	-acetyltransferase
JNE32_16245	COG0583	DNA-binding transcription factor activity
JNE32_16250	COG2220	Zn-dependent hydrolases of the beta-lactamase fold
JNE32_16255	COG1028	Short-chain dehydrogenase reductase Sdr
JNE32_16260	COG0165	Argininosuccinate lyase
JNE32_16265	COG0137	argininosuccinate synthase activity
JNE32_16270	COG0521	Mo-molybdopterin cofactor biosynthetic process
JNE32_16275	COG0282	Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
JNE32_16285	COG0827	DNA restriction-modification system
JNE32_16290	COG2077	Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides
JNE32_16295	COG3874	Sporulation protein YtfJ
JNE32_16305	COG1714	RDD family
JNE32_16310	COG0616	signal peptide processing
JNE32_16315	COG0061	Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
JNE32_16320	COG1574	metal-dependent hydrolase with the TIM-barrel fold
JNE32_16325	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
JNE32_16335	COG0301	tRNA thio-modification
JNE32_16340	COG1104	cysteine desulfurase activity
JNE32_16345	COG1114	Component of the transport system for branched-chain amino acids
JNE32_16350	COG4477	modulates the frequency and position of FtsZ ring formation. Inhibits FtsZ ring formation at polar sites. Interacts either with FtsZ or with one of its binding partners to promote depolymerization
JNE32_16355	COG1387	Histidinol phosphatase and related hydrolases of the PHP family
JNE32_16360	COG1309	transcriptional regulator
JNE32_16365	COG1956	GAF domain-containing protein
JNE32_16370	COG2199	diguanylate cyclase activity
JNE32_16370	COG2203	Gaf domain
JNE32_16375	COG0522	One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit
JNE32_16380	COG0162	Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
JNE32_16385	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
JNE32_16390	COG0454	-acetyltransferase
JNE32_16395	COG0517	IMP dehydrogenase activity
JNE32_16400	COG0123	including yeast histone deacetylase and acetoin utilization protein
JNE32_16405	COG1360	Flagellar Motor Protein
JNE32_16410	COG1291	archaeal or bacterial-type flagellum-dependent cell motility
JNE32_16415	COG1609	Transcriptional regulator
JNE32_16420	COG2876	3-deoxy-7-phosphoheptulonate synthase activity
JNE32_16420	COG1605	Chorismate mutase
JNE32_16425	COG3118	belongs to the thioredoxin family
JNE32_16430	COG4980	gas vesicle protein
JNE32_16435	COG4768	protein containing a divergent version of the methyl-accepting chemotaxis-like domain
JNE32_16440	COG0773	UDP-N-acetylmuramate-L-alanine ligase activity
JNE32_16445	COG1674	ftsk spoiiie
JNE32_16450	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
JNE32_16455	COG4848	Belongs to the UPF0354 family
JNE32_16460	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
JNE32_16475	COG1363	Peptidase, m42
JNE32_16480	COG5584	Small secreted protein
JNE32_16485	COG0281	malic enzyme
JNE32_16490	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
JNE32_16495	COG0220	tRNA (guanine-N7-)-methyltransferase activity
JNE32_16505	COG0510	thiamine kinase activity
JNE32_16510	COG1523	belongs to the glycosyl hydrolase 13 family
JNE32_16515	COG1597	lipid kinase activity
JNE32_16525	COG1514	Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'- phosphomonoester
JNE32_16530	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
JNE32_16535	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
JNE32_16540	COG2252	PERMEase
JNE32_16545	COG4473	ABC transporter
JNE32_16550	COG1131	(ABC) transporter
JNE32_16555	COG1349	DNA-binding transcription factor activity
JNE32_16560	COG1187	pseudouridine synthase activity
JNE32_16565	COG2244	polysaccharide biosynthetic process
JNE32_16570	COG2081	HI0933 family
JNE32_16575	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
JNE32_16585	COG5578	integral membrane protein
JNE32_16590	COG0673	inositol 2-dehydrogenase activity
JNE32_16595	COG1653	transport
JNE32_16600	COG4225	unsaturated rhamnogalacturonyl hydrolase activity
JNE32_16605	COG4209	transmembrane transport
JNE32_16610	COG2207	Transcriptional regulator
JNE32_16615	COG1653	transport
JNE32_16620	COG0395	ABC-type sugar transport system, permease component
JNE32_16625	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
JNE32_16630	COG2124	cytochrome p450
JNE32_16635	COG0502	Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical- based mechanism
JNE32_16645	COG0156	8-amino-7-oxononanoate synthase activity
JNE32_16650	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
JNE32_16660	COG1073	alpha beta
JNE32_16665	COG1609	Transcriptional regulator
JNE32_16670	COG1653	transport
JNE32_16675	COG1175	transmembrane transport
JNE32_16680	COG0395	ABC-type sugar transport system, permease component
JNE32_16685	COG1486	melibiose metabolic process
JNE32_16690	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
JNE32_16695	COG0495	leucyl-tRNA aminoacylation
JNE32_16705	COG1366	Belongs to the anti-sigma-factor antagonist family
JNE32_16705	COG2202	Pas domain
JNE32_16710	COG2814	Major facilitator Superfamily
JNE32_16715	COG2433	Pfam Transposase IS66
JNE32_16720	COG0577	efflux transmembrane transporter activity
JNE32_16725	COG1136	(ABC) transporter
JNE32_16730	COG2205	protein histidine kinase activity
JNE32_16735	COG0745	RESPONSE REGULATOR receiver
JNE32_16740	COG0577	efflux transmembrane transporter activity
JNE32_16745	COG1136	(ABC) transporter
JNE32_16760	COG1131	(ABC) transporter
JNE32_16765	COG1725	Transcriptional regulator
JNE32_16780	COG1242	4 iron, 4 sulfur cluster binding
JNE32_16785	COG2519	Catalyzes the S-adenosyl-L-methionine-dependent formation of N(1)-methyladenine at position 58 (m1A58) in tRNA
JNE32_16795	COG2267	carboxylic ester hydrolase activity
JNE32_16800	COG0663	COG0663 Carbonic anhydrases acetyltransferases, isoleucine patch superfamily
JNE32_16805	COG1113	amino acid transport
JNE32_16810	COG0367	asparagine synthase
JNE32_16815	COG0192	Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme
JNE32_16820	COG1866	Involved in the gluconeogenesis. Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP) through direct phosphoryl transfer between the nucleoside triphosphate and OAA
JNE32_16830	COG1506	peptidase
JNE32_16835	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
JNE32_16840	COG1116	anion transmembrane transporter activity
JNE32_16845	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
JNE32_16850	COG0494	nUDIX hydrolase
JNE32_16855	COG4824	toxin secretion phage lysis holin
JNE32_16860	COG0783	Belongs to the Dps family
JNE32_16875	COG1854	S-ribosylhomocysteine lyase activity
JNE32_16880	COG0759	Could be involved in insertion of integral membrane proteins into the membrane
JNE32_16885	COG0288	reversible hydration of carbon dioxide
JNE32_16890	COG0254	rRNA binding
JNE32_16895	COG1271	oxidase subunit
JNE32_16900	COG1294	oxidase, subunit
JNE32_16910	COG1108	ABC-type Mn2 Zn2 transport systems permease components
JNE32_16915	COG1108	ABC-type Mn2 Zn2 transport systems permease components
JNE32_16915	COG1321	iron dependent repressor
JNE32_16920	COG1121	(ABC) transporter
JNE32_16925	COG0803	Belongs to the bacterial solute-binding protein 9 family
JNE32_16930	COG4948	Mandelate Racemase Muconate Lactonizing
JNE32_16935	COG0318	PFAM AMP-dependent synthetase and ligase
JNE32_16940	COG0447	Converts o-succinylbenzoyl-CoA (OSB-CoA) to 1,4- dihydroxy-2-naphthoyl-CoA (DHNA-CoA)
JNE32_16945	COG0596	Alpha beta hydrolase
JNE32_16950	COG1165	Catalyzes the thiamine diphosphate-dependent decarboxylation of 2-oxoglutarate and the subsequent addition of the resulting succinic semialdehyde-thiamine pyrophosphate anion to isochorismate to yield 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylate (SEPHCHC)
JNE32_16955	COG1169	isochorismate synthase
JNE32_16960	COG1734	Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters
JNE32_16965	COG1210	Utp--glucose-1-phosphate uridylyltransferase
JNE32_16970	COG1004	Belongs to the UDP-glucose GDP-mannose dehydrogenase family
JNE32_16975	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
JNE32_16980	COG0438	transferase activity, transferring glycosyl groups
JNE32_16990	COG2334	A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response
JNE32_16995	COG0438	transferase activity, transferring glycosyl groups
JNE32_17000	COG2334	A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response
JNE32_17005	COG3476	COG3476 Tryptophan-rich sensory protein (mitochondrial benzodiazepine receptor homolog)
JNE32_17010	COG0058	SHG alpha-glucan phosphorylase activity
JNE32_17015	COG0297	glycogen (starch) synthase activity
JNE32_17020	COG0448	Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans
JNE32_17025	COG0448	Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans
JNE32_17030	COG0296	Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position
JNE32_17155	COG3859	Proton-coupled thiamine transporter YuaJ
JNE32_17160	COG1247	-acetyltransferase
JNE32_17165	COG2268	Band 7 protein
JNE32_17170	COG1585	Membrane protein implicated in regulation of membrane protease activity
JNE32_17175	COG2318	DinB family
JNE32_17185	COG1454	alcohol dehydrogenase
JNE32_17190	COG1012	belongs to the aldehyde dehydrogenase family
JNE32_17195	COG1510	regulation of RNA biosynthetic process
JNE32_17205	COG0569	domain protein
JNE32_17210	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
JNE32_17215	COG4682	membrane
JNE32_17220	COG1705	Flagellar rod assembly protein muramidase FlgJ
JNE32_17225	COG0477	Major facilitator Superfamily
JNE32_17230	COG5553	Cysteine dioxygenase type I
JNE32_17240	COG1968	undecaprenyl-diphosphatase activity
JNE32_17245	COG0628	permease
JNE32_17250	COG0673	inositol 2-dehydrogenase activity
JNE32_17255	COG4806	L-rhamnose isomerase
JNE32_17260	COG3254	rhamnose metabolic process
JNE32_17265	COG1070	Carbohydrate kinase
JNE32_17270	COG1349	DNA-binding transcription factor activity
JNE32_17275	COG3347	Dehydrogenase
JNE32_17275	COG1028	Short-chain dehydrogenase reductase Sdr
JNE32_17280	COG0840	transmembrane signaling receptor activity
JNE32_17285	COG0840	transmembrane signaling receptor activity
JNE32_17290	COG0840	transmembrane signaling receptor activity
JNE32_17295	COG0840	transmembrane signaling receptor activity
JNE32_17310	COG0432	Pfam Uncharacterised protein family UPF0047
JNE32_17320	COG0366	Alpha amylase catalytic
JNE32_17325	COG1253	flavin adenine dinucleotide binding
JNE32_17330	COG2738	Putative neutral zinc metallopeptidase
JNE32_17345	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
JNE32_17360	COG0166	Belongs to the GPI family
JNE32_17365	COG1979	alcohol dehydrogenase
JNE32_17370	COG1979	alcohol dehydrogenase
JNE32_17375	COG2155	Conserved Protein
JNE32_17380	COG1098	S1 RNA binding domain
JNE32_17385	COG0436	Aminotransferase
JNE32_17390	COG1522	sequence-specific DNA binding
JNE32_17395	COG2267	carboxylic ester hydrolase activity
JNE32_17405	COG1168	Bifunctional PLP-dependent enzyme with beta-cystaTHIonase and maltose regulon repressor activities
JNE32_17410	COG2205	protein histidine kinase activity
JNE32_17420	COG5018	Exonuclease
JNE32_17425	COG2814	Major facilitator Superfamily
JNE32_17430	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
JNE32_17435	COG3011	Protein conserved in bacteria
JNE32_17445	COG3290	protein histidine kinase activity
JNE32_17450	COG4565	transcriptional regulatory protein
JNE32_17455	COG1744	ABC transporter substrate-binding protein PnrA-like
JNE32_17460	COG3845	ABC transporter
JNE32_17465	COG4603	Belongs to the binding-protein-dependent transport system permease family
JNE32_17470	COG1079	Belongs to the binding-protein-dependent transport system permease family
JNE32_17475	COG3493	citrate carrier protein
JNE32_17485	COG2111	Na H antiporter
JNE32_17485	COG1009	NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit
JNE32_17490	COG2111	Na H antiporter
JNE32_17495	COG1006	Multisubunit Na H antiporter MnhC subunit
JNE32_17500	COG0651	ATP synthesis coupled electron transport
JNE32_17505	COG1863	multisubunit Na H antiporter MnhE subunit
JNE32_17510	COG2212	antiporter activity
JNE32_17515	COG1320	monovalent cation:proton antiporter activity
JNE32_17520	COG2050	protein possibly involved in aromatic compounds catabolism
JNE32_17525	COG2197	response regulator
JNE32_17530	COG4585	Histidine kinase
JNE32_17540	COG0142	geranyltranstransferase activity
JNE32_17560	COG3434	signal transduction protein containing EAL and modified HD-GYP domains
JNE32_17565	COG1488	Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP
JNE32_17570	COG1335	isochorismatase
JNE32_17575	COG5506	Protein of unknown function (DUF1694)
JNE32_17590	COG0628	permease
JNE32_17605	COG1418	mRNA catabolic process
JNE32_17610	COG1028	Short-chain dehydrogenase reductase Sdr
JNE32_17620	COG1511	domain protein
JNE32_17625	COG0433	COG0433 Predicted ATPase
JNE32_17625	COG1674	ftsk spoiiie
JNE32_17630	COG4499	WXG100 protein secretion system (Wss), protein YukC
JNE32_17635	COG5417	Belongs to the EsaB family
JNE32_17640	COG4842	Belongs to the WXG100 family
JNE32_17645	COG4465	DNA-binding protein that represses the expression of many genes that are induced as cells make the transition from rapid exponential growth to stationary phase. It is a GTP-binding protein that senses the intracellular GTP concentration as an indicator of nutritional limitations. At low GTP concentration it no longer binds GTP and stop to act as a transcriptional repressor
JNE32_17645	COG2508	Transcriptional regulator
JNE32_17650	COG0686	Belongs to the AlaDH PNT family
JNE32_17655	COG5634	Uncharacterized conserved protein (DUF2278)
JNE32_17660	COG3251	PFAM MbtH domain protein
JNE32_17665	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
JNE32_17670	COG3433	isochorismatase activity
JNE32_17670	COG1535	isochorismatase
JNE32_17675	COG1021	2,3-dihydroxybenzoate-AMP ligase
JNE32_17680	COG1169	isochorismate synthase
JNE32_17685	COG1028	Short-chain dehydrogenase reductase Sdr
JNE32_17690	COG2819	hydrolase of the alpha beta superfamily
JNE32_17695	COG2041	Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. The catalytic subunit MsrP is non-stereospecific, being able to reduce both (R-) and (S-) diastereoisomers of methionine sulfoxide
JNE32_17700	COG1268	BioY protein
JNE32_17705	COG2056	Na+-H+ antiporter family
JNE32_17710	COG0260	Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides
JNE32_17715	COG1963	PFAM Acid phosphatase vanadium-dependent haloperoxidase related
JNE32_17720	COG3584	3D domain protein
JNE32_17735	COG1252	NADH dehydrogenase
JNE32_17740	COG0492	ferredoxin-NADP+ reductase activity
JNE32_17750	COG0516	GMP reductase activity
JNE32_17755	COG2808	Putative FMN-binding domain
JNE32_17760	COG0456	acetyltransferase
JNE32_17765	COG0316	Belongs to the HesB IscA family
JNE32_17770	COG0253	Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan
JNE32_17775	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
JNE32_17780	COG4844	belongs to the
JNE32_17785	COG1252	NADH dehydrogenase
JNE32_17790	COG4837	Protein of unknown function (DUF1462)
JNE32_17795	COG0694	Involved in iron-sulfur cluster biogenesis. Binds a 4Fe- 4S cluster, can transfer this cluster to apoproteins, and thereby intervenes in the maturation of Fe S proteins. Could also act as a scaffold chaperone for damaged Fe S proteins
JNE32_17800	COG4946	Tricorn protease homolog
JNE32_17800	COG0823	Involved in the tonB-independent uptake of proteins
JNE32_17800	COG1506	peptidase
JNE32_17805	COG0083	homoserine kinase activity
JNE32_17810	COG0498	Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine
JNE32_17815	COG0460	homoserine dehydrogenase
JNE32_17820	COG2334	A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response
JNE32_17825	COG1267	Lipid phosphatase which dephosphorylates phosphatidylglycerophosphate (PGP) to phosphatidylglycerol (PG)
JNE32_17830	COG0647	UMP catabolic process
JNE32_17835	COG2445	Protein of unknown function DUF86
JNE32_17840	COG4470	Protein conserved in bacteria
JNE32_17850	COG0320	Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives
JNE32_17855	COG0739	heme binding
JNE32_17865	COG3377	Domain of unknown function (DUF1805)
JNE32_17870	COG0737	Belongs to the 5'-nucleotidase family
JNE32_17875	COG0730	response to heat
JNE32_17880	COG1801	Protein of unknown function DUF72
JNE32_17890	COG0044	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides
JNE32_17895	COG2508	Transcriptional regulator
JNE32_17900	COG2233	PERMEase
JNE32_17905	COG2233	PERMEase
JNE32_17910	COG3648	Uricase
JNE32_17910	COG3195	allantoin biosynthetic process
JNE32_17915	COG2351	hydroxyisourate hydrolase activity
JNE32_17925	COG2080	2 iron, 2 sulfur cluster binding
JNE32_17930	COG1529	Aldehyde oxidase and xanthine dehydrogenase
JNE32_17935	COG1319	Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM
JNE32_17940	COG2068	MobA-Related Protein
JNE32_17945	COG1975	Xanthine and CO dehydrogenases maturation factor, XdhC CoxF family
JNE32_17950	COG0075	2-aminoethylphosphonate-pyruvate transaminase activity
JNE32_17955	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
JNE32_17965	COG2356	endonuclease I
JNE32_17970	COG3842	ATPase activity
JNE32_17975	COG2188	Transcriptional regulator
JNE32_17980	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
JNE32_17985	COG0395	ABC-type sugar transport system, permease component
JNE32_17990	COG1175	transmembrane transport
JNE32_17995	COG1653	transport
JNE32_18000	COG2222	sugar isomerase
JNE32_18005	COG0322	excinuclease ABC activity
JNE32_18010	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
JNE32_18025	COG0346	lactoylglutathione lyase activity
JNE32_18030	COG0640	Transcriptional regulator
JNE32_18035	COG0719	Fe-S assembly protein
JNE32_18040	COG0822	iron-sulfur transferase activity
JNE32_18045	COG0520	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
JNE32_18050	COG0719	Fe-S assembly protein
JNE32_18055	COG0396	ATPase activity
JNE32_18065	COG0599	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
JNE32_18070	COG1464	Belongs to the NlpA lipoprotein family
JNE32_18075	COG2011	ABC-type metal ion transport system permease component
JNE32_18080	COG1135	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
JNE32_18090	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
JNE32_18095	COG1658	Required for correct processing of both the 5' and 3' ends of 5S rRNA precursor. Cleaves both sides of a double-stranded region yielding mature 5S rRNA in one step
JNE32_18105	COG0509	glycine decarboxylation via glycine cleavage system
JNE32_18110	COG1393	Belongs to the ArsC family
JNE32_18115	COG1960	acyl-CoA dehydrogenase activity
JNE32_18120	COG0183	Belongs to the thiolase family
JNE32_18125	COG1250	3-hydroxyacyl-CoA dehydrogenase
JNE32_18125	COG1024	Enoyl-CoA hydratase
JNE32_18135	COG0506	proline dehydrogenase activity
JNE32_18145	COG5577	PFAM Coat F domain
JNE32_18150	COG1846	Transcriptional regulator
JNE32_18155	COG0477	Major facilitator Superfamily
JNE32_18160	COG1942	4-Oxalocrotonate Tautomerase
JNE32_18165	COG1028	Short-chain dehydrogenase reductase Sdr
JNE32_18170	COG0583	DNA-binding transcription factor activity
JNE32_18180	COG1120	ATPase activity
JNE32_18195	COG1028	Short-chain dehydrogenase reductase Sdr
JNE32_18200	COG0783	Belongs to the Dps family
JNE32_18205	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
JNE32_18210	COG0745	RESPONSE REGULATOR receiver
JNE32_18215	COG2205	protein histidine kinase activity
JNE32_18215	COG2770	Histidine kinase
JNE32_18225	COG1309	transcriptional regulator
JNE32_18230	COG0114	fumarate hydratase activity
JNE32_18240	COG0697	spore germination
JNE32_18245	COG0814	amino acid
JNE32_18255	COG2197	response regulator
JNE32_18260	COG4585	Histidine kinase
JNE32_18265	COG4758	membrane
JNE32_18270	COG3595	metallopeptidase activity
JNE32_18275	COG1842	Phage shock protein A
JNE32_18280	COG4758	membrane
JNE32_18285	COG2814	Major facilitator Superfamily
JNE32_18290	COG2096	Adenosyltransferase
JNE32_18295	COG1120	ATPase activity
JNE32_18300	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
JNE32_18305	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
JNE32_18310	COG1028	Short-chain dehydrogenase reductase Sdr
JNE32_18315	COG3386	PFAM SMP-30 Gluconolaconase
JNE32_18320	COG2205	protein histidine kinase activity
JNE32_18325	COG0745	RESPONSE REGULATOR receiver
JNE32_18335	COG1191	sigma factor activity
JNE32_18345	COG2140	Oxalate decarboxylase
JNE32_18355	COG0577	efflux transmembrane transporter activity
JNE32_18360	COG1136	(ABC) transporter
JNE32_18365	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
JNE32_18370	COG1120	ATPase activity
JNE32_18375	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
JNE32_18380	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
JNE32_18385	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
JNE32_18390	COG0531	amino acid
JNE32_18400	COG1988	membrane-bound metal-dependent
JNE32_18405	COG1368	sulfuric ester hydrolase activity
JNE32_18410	COG1910	domain protein
JNE32_18415	COG0725	ABC transporter, periplasmic molybdate-binding protein
JNE32_18420	COG4149	molybdate abc transporter
JNE32_18425	COG0656	L-ascorbic acid biosynthetic process
JNE32_18435	COG0025	NhaP-type Na H and K H
JNE32_18440	COG0155	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
JNE32_18445	COG0369	Component of the sulfite reductase complex that catalyzes the 6-electron reduction of sulfite to sulfide. This is one of several activities required for the biosynthesis of L- cysteine from sulfate. The flavoprotein component catalyzes the electron flow from NADPH - FAD - FMN to the hemoprotein component
JNE32_18450	COG3973	AAA domain
JNE32_18460	COG2860	membrane
JNE32_18465	COG1495	Required for disulfide bond formation in some periplasmic proteins. Acts by oxidizing the DsbA protein
JNE32_18470	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
JNE32_18475	COG2217	Heavy metal translocating P-type atpase
JNE32_18480	COG2217	Heavy metal translocating P-type atpase
JNE32_18485	COG2608	mercury ion transmembrane transporter activity
JNE32_18490	COG1937	Protein conserved in bacteria
JNE32_18495	COG0673	inositol 2-dehydrogenase activity
JNE32_18500	COG1182	Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity
JNE32_18505	COG1289	transmembrane transporter activity
JNE32_18515	COG2076	Multidrug Resistance protein
JNE32_18520	COG1309	transcriptional regulator
JNE32_18525	COG1028	Short-chain dehydrogenase reductase Sdr
JNE32_18535	COG0691	Required for rescue of stalled ribosomes mediated by trans-translation. Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes. tmRNA and SmpB together mimic tRNA shape, replacing the anticodon stem-loop with SmpB. tmRNA is encoded by the ssrA gene
JNE32_18540	COG0557	exoribonuclease II activity
JNE32_18545	COG1647	Serine aminopeptidase, S33
JNE32_18550	COG1314	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
JNE32_18555	COG0596	Alpha beta hydrolase
JNE32_18560	COG1476	TRANSCRIPTIONal
JNE32_18565	COG1396	sequence-specific DNA binding
JNE32_18570	COG1396	sequence-specific DNA binding
JNE32_18575	COG1733	regulation of RNA biosynthetic process
JNE32_18580	COG0840	transmembrane signaling receptor activity
JNE32_18585	COG1174	glycine betaine transport
JNE32_18590	COG1732	Glycine betaine
JNE32_18595	COG1174	glycine betaine transport
JNE32_18600	COG0517	IMP dehydrogenase activity
JNE32_18600	COG1125	glycine betaine transport
JNE32_18605	COG1510	regulation of RNA biosynthetic process
JNE32_18610	COG1174	glycine betaine transport
JNE32_18615	COG1732	Glycine betaine
JNE32_18620	COG1174	glycine betaine transport
JNE32_18625	COG1125	glycine betaine transport
JNE32_18625	COG0517	IMP dehydrogenase activity
JNE32_18630	COG1510	regulation of RNA biosynthetic process
JNE32_18635	COG2095	MarC family integral membrane protein
JNE32_18645	COG3064	Membrane
JNE32_18650	COG4640	response to antibiotic
JNE32_18655	COG0456	acetyltransferase
JNE32_18660	COG0148	phosphopyruvate hydratase activity
JNE32_18665	COG0696	Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
JNE32_18670	COG0149	triose-phosphate isomerase activity
JNE32_18675	COG0126	phosphoglycerate kinase activity
JNE32_18680	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
JNE32_18685	COG2390	Transcriptional regulator
JNE32_18690	COG2814	Major facilitator Superfamily
JNE32_18695	COG1609	Transcriptional regulator
JNE32_18700	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
JNE32_18710	COG0583	DNA-binding transcription factor activity
JNE32_18715	COG0697	spore germination
JNE32_18720	COG1113	amino acid transport
JNE32_18725	COG3858	chitin binding
JNE32_18730	COG1556	Lactate utilization protein
JNE32_18735	COG1139	Iron-sulfur cluster binding protein
JNE32_18740	COG0247	lactate metabolic process
JNE32_18745	COG2197	response regulator
JNE32_18750	COG4585	Histidine kinase
JNE32_18755	COG0842	Transport permease protein
JNE32_18760	COG1131	(ABC) transporter
JNE32_18765	COG0596	Alpha beta hydrolase
JNE32_18770	COG2208	phosphoserine phosphatase activity
JNE32_18775	COG3867	Arabinogalactan endo-beta-1,4-galactanase
JNE32_18780	COG1874	Beta-galactosidase
JNE32_18785	COG3833	ABC-type maltose transport systems, permease component
JNE32_18790	COG1175	transmembrane transport
JNE32_18795	COG2182	Extracellular solute-binding protein
JNE32_18800	COG1609	Transcriptional regulator
JNE32_18805	COG2186	Transcriptional regulator
JNE32_18810	COG1620	l-lactate permease
JNE32_18815	COG1508	bacterial-type RNA polymerase transcriptional activator activity, sequence-specific DNA binding
JNE32_18825	COG5039	Polysaccharide pyruvyl transferase
JNE32_18830	COG0399	UDP-4-amino-4-deoxy-L-arabinose aminotransferase
JNE32_18835	COG0110	maltose O-acetyltransferase activity
JNE32_18840	COG2148	undecaprenyl-phosphate glucose phosphotransferase activity
JNE32_18845	COG2244	polysaccharide biosynthetic process
JNE32_18850	COG1216	Glycosyl transferase, family 2
JNE32_18855	COG5039	Polysaccharide pyruvyl transferase
JNE32_18860	COG1216	Glycosyl transferase, family 2
JNE32_18870	COG0438	transferase activity, transferring glycosyl groups
JNE32_18875	COG1215	transferase activity, transferring glycosyl groups
JNE32_18880	COG0438	transferase activity, transferring glycosyl groups
JNE32_18885	COG1086	Polysaccharide biosynthesis protein
JNE32_18890	COG0489	protein tyrosine kinase activity
JNE32_18895	COG3944	biosynthesis protein
JNE32_18900	COG1396	sequence-specific DNA binding
JNE32_18905	COG2272	Belongs to the type-B carboxylesterase lipase family
JNE32_18915	COG3479	Phenolic acid decarboxylase
JNE32_18925	COG1794	racemase activity, acting on amino acids and derivatives
JNE32_18930	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
JNE32_18935	COG1621	beta-fructofuranosidase activity
JNE32_18940	COG1621	beta-fructofuranosidase activity
JNE32_18945	COG0531	amino acid
JNE32_18950	COG1309	transcriptional regulator
JNE32_18955	COG2076	Multidrug Resistance protein
JNE32_18960	COG2076	Multidrug Resistance protein
JNE32_18970	COG0277	FAD linked oxidase domain protein
JNE32_18975	COG3621	Patatin-like phospholipase
JNE32_18985	COG0740	serine-type endopeptidase activity
JNE32_18990	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
JNE32_18995	COG0366	Alpha amylase catalytic
JNE32_19005	COG5521	maltodextrose utilization protein MalA
JNE32_19010	COG3833	ABC-type maltose transport systems, permease component
JNE32_19015	COG1175	transmembrane transport
JNE32_19020	COG2182	Extracellular solute-binding protein
JNE32_19025	COG0366	Alpha amylase catalytic
JNE32_19030	COG1609	Transcriptional regulator
JNE32_19035	COG1611	Belongs to the LOG family
JNE32_19040	COG1694	Mazg nucleotide pyrophosphohydrolase
JNE32_19045	COG0659	secondary active sulfate transmembrane transporter activity
JNE32_19050	COG0288	reversible hydration of carbon dioxide
JNE32_19055	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
JNE32_19060	COG0577	efflux transmembrane transporter activity
JNE32_19065	COG1136	(ABC) transporter
JNE32_19070	COG5002	protein histidine kinase activity
JNE32_19075	COG0745	RESPONSE REGULATOR receiver
JNE32_19085	COG2162	N-hydroxyarylamine O-acetyltransferase activity
JNE32_19090	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
JNE32_19095	COG1481	regulation of sporulation
JNE32_19100	COG0391	Required for morphogenesis under gluconeogenic growth conditions
JNE32_19105	COG1660	Displays ATPase and GTPase activities
JNE32_19110	COG1051	belongs to the nudix hydrolase family
JNE32_19115	COG0492	ferredoxin-NADP+ reductase activity
JNE32_19120	COG0791	NLP P60 protein
JNE32_19120	COG3883	PFAM NLP P60 protein
JNE32_19125	COG0457	Tetratricopeptide repeat
JNE32_19130	COG1132	(ABC) transporter
JNE32_19150	COG0139	Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP
JNE32_19150	COG0140	phosphoribosyl-ATP diphosphatase activity
JNE32_19155	COG0107	imidazoleglycerol-phosphate synthase activity
JNE32_19160	COG0106	1-(5-phosphoribosyl)-5- 5-phosphoribosylamino)methylideneamino imidazole-4-carboxamide isomerase
JNE32_19165	COG0118	IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR
JNE32_19170	COG0131	Imidazoleglycerol-phosphate dehydratase
JNE32_19175	COG0141	Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine
JNE32_19180	COG0040	Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of hisG enzymatic activity
JNE32_19185	COG3705	Required for the first step of histidine biosynthesis. May allow the feedback regulation of ATP phosphoribosyltransferase activity by histidine
JNE32_19190	COG4990	cell redox homeostasis
JNE32_19195	COG5297	Belongs to the glycosyl hydrolase family 6
JNE32_19200	COG0110	maltose O-acetyltransferase activity
JNE32_19205	COG0546	phosphoglycolate phosphatase activity
JNE32_19210	COG0370	Transporter of a GTP-driven Fe(2 ) uptake system
JNE32_19215	COG0682	Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins
JNE32_19220	COG1493	Catalyzes the ATP- as well as the pyrophosphate- dependent phosphorylation of a specific serine residue in HPr, a phosphocarrier protein of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS). HprK P also catalyzes the pyrophosphate-producing, inorganic phosphate-dependent dephosphorylation (phosphorolysis) of seryl-phosphorylated HPr (P- Ser-HPr). The two antagonistic activities of HprK P are regulated by several intracellular metabolites, which change their concentration in response to the absence or presence of rapidly metabolisable carbon sources (glucose, fructose, etc.) in the growth medium. Therefore, by controlling the phosphorylation state of HPr, HPrK P is a sensor enzyme that plays a major role in the regulation of carbon metabolism and sugar transport it mediates carbon catabolite repression (CCR), and regulates PTS-catalyzed carbohydrate uptake and inducer exclusion
JNE32_19225	COG1820	Belongs to the metallo-dependent hydrolases superfamily. NagA family
JNE32_19230	COG0363	glucosamine-6-phosphate deaminase activity
JNE32_19235	COG2188	Transcriptional regulator
JNE32_19240	COG1409	Hydrolyzes cAMP to 5'-AMP. Plays an important regulatory role in modulating the intracellular concentration of cAMP, thereby influencing cAMP-dependent processes
JNE32_19245	COG1846	Transcriptional regulator
JNE32_19260	COG1846	Transcriptional regulator
JNE32_19265	COG2814	Major facilitator Superfamily
JNE32_19270	COG1950	PFAM Membrane protein of
JNE32_19275	COG1983	PspC domain protein
JNE32_19280	COG3595	metallopeptidase activity
JNE32_19295	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
JNE32_19300	COG0178	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate
JNE32_19305	COG0556	nucleotide-excision repair
JNE32_19310	COG4897	Protein conserved in bacteria
JNE32_19315	COG0574	Belongs to the PEP-utilizing enzyme family
JNE32_19315	COG3848	Pyruvate phosphate dikinase
JNE32_19320	COG1309	transcriptional regulator
JNE32_19325	COG2814	Major facilitator Superfamily
JNE32_19330	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
JNE32_19340	COG0793	Belongs to the peptidase S41A family
JNE32_19340	COG3409	Peptidoglycan-binding domain 1 protein
JNE32_19345	COG2177	Part of the ABC transporter FtsEX involved in
JNE32_19350	COG2884	Cell division ATP-binding protein ftsE
JNE32_19355	COG2010	Cytochrome c
JNE32_19360	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
JNE32_19370	COG0653	protein targeting
JNE32_19375	COG1544	Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
JNE32_19390	COG1516	flagellar protein fliS
JNE32_19395	COG1345	Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end
JNE32_19400	COG1334	flagellar protein FlaG
JNE32_19405	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
JNE32_19410	COG1551	Could accelerate the degradation of some genes transcripts potentially through selective RNA binding
JNE32_19415	COG1699	Binds to the C-terminal region of flagellin, which is implicated in polymerization, and participates in the assembly of the flagellum
JNE32_19425	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
JNE32_19430	COG1256	bacterial-type flagellum assembly
JNE32_19430	COG4786	Flagellar basal body rod
JNE32_19435	COG3418	PFAM FlgN family protein
JNE32_19440	COG2747	anti-sigma28 factor FlgM
JNE32_19450	COG1040	competence protein
JNE32_19460	COG4098	Superfamily II DNA RNA helicase required for DNA uptake (late competence protein)
JNE32_19465	COG1307	EDD domain protein, DegV family
JNE32_19475	COG4585	Histidine kinase
JNE32_19480	COG1739	Uncharacterized protein family UPF0029
JNE32_19485	COG1316	TRANSCRIPTIONal
JNE32_19490	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
JNE32_19495	COG0438	transferase activity, transferring glycosyl groups
JNE32_19500	COG1215	transferase activity, transferring glycosyl groups
JNE32_19505	COG3206	protein involved in exopolysaccharide biosynthesis
JNE32_19510	COG3307	-O-antigen
JNE32_19515	COG1004	Belongs to the UDP-glucose GDP-mannose dehydrogenase family
JNE32_19520	COG0297	glycogen (starch) synthase activity
JNE32_19520	COG0438	transferase activity, transferring glycosyl groups
JNE32_19525	COG2244	polysaccharide biosynthetic process
JNE32_19540	COG0860	N-Acetylmuramoyl-L-alanine amidase
JNE32_19540	COG2247	cell wall binding repeat
JNE32_19545	COG2247	cell wall binding repeat
JNE32_19545	COG2385	sporulation resulting in formation of a cellular spore
JNE32_19555	COG1316	TRANSCRIPTIONal
JNE32_19560	COG0381	UDP-N-acetylglucosamine 2-epimerase activity
JNE32_19580	COG1210	Utp--glucose-1-phosphate uridylyltransferase
JNE32_19585	COG1134	teichoic acid transport
JNE32_19590	COG1682	transport, permease protein
JNE32_19605	COG1887	Glycosyl glycerophosphate transferases involved in teichoic acid biosynthesis TagF TagB EpsJ RodC
JNE32_19605	COG1215	transferase activity, transferring glycosyl groups
JNE32_19610	COG0463	Glycosyl transferase, family 2
JNE32_19655	COG4193	domain, Protein
JNE32_19660	COG1482	cell wall glycoprotein biosynthetic process
JNE32_19665	COG0697	spore germination
JNE32_19670	COG0814	amino acid
JNE32_19680	COG2814	Major facilitator Superfamily
JNE32_19685	COG1316	TRANSCRIPTIONal
JNE32_19690	COG0561	phosphatase activity
JNE32_19695	COG0791	NLP P60 protein
JNE32_19705	COG2843	Capsule synthesis protein
JNE32_19715	COG0771	Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA)
JNE32_19720	COG1609	Transcriptional regulator
JNE32_19725	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
JNE32_19730	COG1869	D-ribose catabolic process
JNE32_19735	COG1129	ABC transporter
JNE32_19740	COG1172	Belongs to the binding-protein-dependent transport system permease family
JNE32_19745	COG1879	ABC-type sugar transport system periplasmic component
JNE32_19750	COG3103	Sh3 type 3 domain protein
JNE32_19760	COG2249	NAD(P)H dehydrogenase (quinone) activity
JNE32_19765	COG3527	Alpha-acetolactate decarboxylase
JNE32_19770	COG0028	Belongs to the TPP enzyme family
JNE32_19775	COG0583	DNA-binding transcription factor activity
JNE32_19780	COG1055	Involved in arsenical resistance. Thought to form the channel of an arsenite pump
JNE32_19795	COG5337	Spore coat protein CotH
JNE32_19805	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
JNE32_19815	COG0405	Gamma-glutamyltransferase
JNE32_19820	COG1522	sequence-specific DNA binding
JNE32_19825	COG2059	Chromate
JNE32_19830	COG2059	Chromate
JNE32_19840	COG0655	NAD(P)H dehydrogenase (quinone) activity
JNE32_19845	COG0583	DNA-binding transcription factor activity
JNE32_19875	COG5444	nuclease activity
JNE32_19895	COG3878	Protein conserved in bacteria
JNE32_19900	COG1004	Belongs to the UDP-glucose GDP-mannose dehydrogenase family
JNE32_19905	COG4464	protein tyrosine phosphatase activity
JNE32_19910	COG0489	protein tyrosine kinase activity
JNE32_19915	COG3944	biosynthesis protein
JNE32_19925	COG4715	Zinc finger, swim domain protein
JNE32_19930	COG0553	Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair
JNE32_19935	COG0561	phosphatase activity
JNE32_19940	COG1349	DNA-binding transcription factor activity
JNE32_19945	COG0629	single-stranded DNA binding
JNE32_19960	COG3764	Sortase (surface protein transpeptidase)
JNE32_19970	COG0745	RESPONSE REGULATOR receiver
JNE32_19970	COG2972	Histidine kinase
JNE32_19975	COG1970	mechanosensitive ion channel activity
JNE32_19980	COG0764	3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity
JNE32_19985	COG0457	Tetratricopeptide repeat
JNE32_19990	COG4786	Flagellar basal body rod
JNE32_19995	COG4786	Flagellar basal body rod
JNE32_20000	COG1077	Cell shape determining protein MreB Mrl
JNE32_20005	COG1609	Transcriptional regulator
JNE32_20015	COG1846	Transcriptional regulator
JNE32_20020	COG2814	Major facilitator Superfamily
JNE32_20025	COG3420	alginic acid biosynthetic process
JNE32_20030	COG1953	Uracil, thiamine, allantoin
JNE32_20035	COG0477	Major facilitator Superfamily
JNE32_20040	COG1335	isochorismatase
JNE32_20050	COG0004	ammonium transporteR
JNE32_20055	COG0347	Belongs to the P(II) protein family
JNE32_20060	COG0671	phosphoesterase, PA-phosphatase related
JNE32_20070	COG0739	heme binding
JNE32_20075	COG1247	-acetyltransferase
JNE32_20095	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
JNE32_20100	COG0789	Transcriptional regulator
JNE32_20110	COG2910	NAD(P)H-binding
JNE32_20115	COG1959	2 iron, 2 sulfur cluster binding
JNE32_20120	COG0804	urea catabolic process
JNE32_20125	COG0832	Belongs to the urease beta subunit family
JNE32_20130	COG0831	urea catabolic process
JNE32_20145	COG3237	CsbD-like
JNE32_20155	COG0457	Tetratricopeptide repeat
JNE32_20160	COG2896	Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate
JNE32_20165	COG1526	Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH
JNE32_20175	COG2304	oxidoreductase activity
JNE32_20185	COG2304	oxidoreductase activity
JNE32_20190	COG2385	sporulation resulting in formation of a cellular spore
JNE32_20195	COG0766	Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
JNE32_20205	COG4836	Membrane
JNE32_20215	COG0355	proton-transporting ATP synthase activity, rotational mechanism
JNE32_20220	COG0055	Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits
JNE32_20225	COG0224	Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex
JNE32_20230	COG0056	Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit
JNE32_20235	COG0712	F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
JNE32_20240	COG0711	Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)
JNE32_20250	COG0356	it plays a direct role in the translocation of protons across the membrane
JNE32_20260	COG0035	Catalyzes the conversion of uracil and 5-phospho-alpha- D-ribose 1-diphosphate (PRPP) to UMP and diphosphate
JNE32_20265	COG0112	Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism
JNE32_20270	COG4475	Protein of unknown function (DUF436)
JNE32_20275	COG0698	ribose 5-phosphate isomerase
JNE32_20280	COG0394	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
JNE32_20285	COG1971	Probably functions as a manganese efflux pump
JNE32_20290	COG0009	L-threonylcarbamoyladenylate synthase
JNE32_20295	COG1246	Belongs to the acetyltransferase family. ArgA subfamily
JNE32_20315	COG2890	protein-(glutamine-N5) methyltransferase activity
JNE32_20320	COG0216	Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA
JNE32_20325	COG0346	lactoylglutathione lyase activity
JNE32_20330	COG0789	Transcriptional regulator
JNE32_20335	COG0679	Auxin Efflux Carrier
JNE32_20340	COG0281	malic enzyme
JNE32_20345	COG1435	thymidine kinase activity
JNE32_20355	COG1158	Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template
JNE32_20365	COG1494	fructose-1,6-bisphosphatase
JNE32_20370	COG0766	Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
JNE32_20375	COG0176	Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
JNE32_20380	COG0191	fructose-bisphosphate aldolase activity
JNE32_20385	COG2204	response regulator
JNE32_20390	COG4821	SIS domain
JNE32_20395	COG0504	CTP synthase activity
JNE32_20400	COG3343	RNA polymerase activity
JNE32_20405	COG1960	acyl-CoA dehydrogenase activity
JNE32_20410	COG2181	nitrate reductase activity
JNE32_20410	COG0247	lactate metabolic process
JNE32_20415	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
JNE32_20420	COG4294	response to UV
JNE32_20430	COG0262	Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis
JNE32_20435	COG1132	(ABC) transporter
JNE32_20440	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
JNE32_20450	COG2181	nitrate reductase activity
JNE32_20455	COG2180	nitrate reductase molybdenum cofactor assembly chaperone
JNE32_20460	COG1140	nitrate reductase beta subunit
JNE32_20465	COG5013	Belongs to the prokaryotic molybdopterin-containing oxidoreductase family
JNE32_20470	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
JNE32_20480	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
JNE32_20485	COG2223	nitrite transmembrane transporter activity
JNE32_20490	COG0018	arginyl-trna synthetase
JNE32_20495	COG4506	Protein conserved in bacteria
JNE32_20520	COG1131	(ABC) transporter
JNE32_20525	COG0474	ATPase, P-type transporting, HAD superfamily, subfamily IC
JNE32_20530	COG0612	Peptidase, M16
JNE32_20535	COG0612	Peptidase, M16
JNE32_20545	COG3391	amine dehydrogenase activity
JNE32_20550	COG3391	amine dehydrogenase activity
JNE32_20555	COG0457	Tetratricopeptide repeat
JNE32_20585	COG1131	(ABC) transporter
JNE32_20595	COG0010	Belongs to the arginase family
JNE32_20600	COG0421	Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine
JNE32_20605	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
JNE32_20615	COG1994	Peptidase M50
JNE32_20620	COG1942	4-Oxalocrotonate Tautomerase
JNE32_20625	COG1846	Transcriptional regulator
JNE32_20630	COG0441	Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
JNE32_20635	COG0477	Major facilitator Superfamily
JNE32_20640	COG1959	2 iron, 2 sulfur cluster binding
JNE32_20645	COG3465	dGTPase activity
JNE32_20650	COG1078	dGTPase activity
JNE32_20655	COG4844	belongs to the
JNE32_20665	COG0697	spore germination
JNE32_20670	COG0095	Lipoate-protein ligase
JNE32_20675	COG0583	DNA-binding transcription factor activity
JNE32_20680	COG0280	phosphate acetyltransferase
JNE32_20685	COG3253	May function as heme-dependent peroxidase
JNE32_20690	COG1028	Short-chain dehydrogenase reductase Sdr
JNE32_20695	COG0436	Aminotransferase
JNE32_20700	COG2814	Major facilitator Superfamily
JNE32_20705	COG0151	Belongs to the GarS family
JNE32_20710	COG1028	Short-chain dehydrogenase reductase Sdr
JNE32_20715	COG1917	Cupin 2, conserved barrel domain protein
JNE32_20720	COG0077	Prephenate dehydratase
JNE32_20725	COG2814	Major facilitator Superfamily
JNE32_20730	COG0833	amino acid
JNE32_20735	COG4187	Peptidase family M20/M25/M40
JNE32_20740	COG1012	belongs to the aldehyde dehydrogenase family
JNE32_20745	COG0334	Belongs to the Glu Leu Phe Val dehydrogenases family
JNE32_20755	COG1898	dTDP-4-dehydrorhamnose 3,5-epimerase activity
JNE32_20760	COG1091	dTDP-4-dehydrorhamnose reductase activity
JNE32_20765	COG1088	dTDP-glucose 4,6-dehydratase activity
JNE32_20770	COG1209	Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis
JNE32_20775	COG3980	spore coat polysaccharide biosynthesis protein
JNE32_20780	COG1861	Spore coat polysaccharide biosynthesis protein F CMP-KDO synthetase
JNE32_20785	COG2089	acid synthase
JNE32_20790	COG0456	acetyltransferase
JNE32_20795	COG0399	UDP-4-amino-4-deoxy-L-arabinose aminotransferase
JNE32_20800	COG1887	Glycosyl glycerophosphate transferases involved in teichoic acid biosynthesis TagF TagB EpsJ RodC
JNE32_20805	COG0463	Glycosyl transferase, family 2
JNE32_20815	COG2363	Small membrane protein
JNE32_20820	COG2233	PERMEase
JNE32_20830	COG1012	belongs to the aldehyde dehydrogenase family
JNE32_20835	COG0692	Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine
JNE32_20840	COG1216	Glycosyl transferase, family 2
JNE32_20845	COG0351	phosphomethylpyrimidine kinase
JNE32_20855	COG1621	beta-fructofuranosidase activity
JNE32_20860	COG1263	PTS System
JNE32_20860	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
JNE32_20865	COG2116	formate transmembrane transporter activity
JNE32_20870	COG3711	transcriptional antiterminator
JNE32_20880	COG1404	Belongs to the peptidase S8 family
JNE32_20885	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
JNE32_20890	COG0778	Nitroreductase
JNE32_20895	COG0772	Belongs to the SEDS family
JNE32_20905	COG3125	oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor
JNE32_20910	COG1845	cytochrome c oxidase, subunit III
JNE32_20915	COG0843	Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B
JNE32_20920	COG1622	oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor
JNE32_20925	COG2261	transglycosylase associated protein
JNE32_20930	COG4468	UDPglucose--hexose-1-phosphate uridylyltransferase
JNE32_20935	COG0153	Catalyzes the transfer of the gamma-phosphate of ATP to D-galactose to form alpha-D-galactose-1-phosphate (Gal-1-P)
JNE32_20940	COG2246	polysaccharide biosynthetic process
JNE32_20945	COG1309	transcriptional regulator
JNE32_20955	COG3162	membrane
JNE32_20960	COG4147	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
JNE32_20965	COG2761	dithiol-disulfide isomerase involved in polyketide biosynthesis
JNE32_20970	COG2837	iron assimilation
JNE32_20975	COG2822	iron ion transport
JNE32_20980	COG0672	)-iron permease
JNE32_20985	COG0352	thiamine-phosphate diphosphorylase activity
JNE32_20990	COG2145	Catalyzes the phosphorylation of the hydroxyl group of 4-methyl-5-beta-hydroxyethylthiazole (THZ)
JNE32_20995	COG0583	DNA-binding transcription factor activity
JNE32_21000	COG1380	Effector of murein hydrolase LrgA
JNE32_21005	COG1346	cytolysis
JNE32_21010	COG2814	Major facilitator Superfamily
JNE32_21015	COG4895	conserved protein (DUF2196)
JNE32_21020	COG1092	Specifically methylates the guanine in position 2445 (m2G2445) and the guanine in position 2069 (m7G2069) of 23S rRNA
JNE32_21025	COG0346	lactoylglutathione lyase activity
JNE32_21030	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
JNE32_21035	COG1404	Belongs to the peptidase S8 family
JNE32_21040	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
JNE32_21040	COG1263	PTS System
JNE32_21045	COG3711	transcriptional antiterminator
JNE32_21050	COG1442	glycosyl transferase family 8
JNE32_21055	COG5522	Integral membrane protein (intg_mem_TP0381)
JNE32_21060	COG1846	Transcriptional regulator
JNE32_21065	COG0162	Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
JNE32_21070	COG2234	aminopeptidase activity
JNE32_21090	COG2357	RelA SpoT domain protein
JNE32_21095	COG1575	Belongs to the MenA family. Type 1 subfamily
JNE32_21110	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
JNE32_21115	COG1696	Membrane protein involved in D-alanine export
JNE32_21120	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
JNE32_21125	COG3966	Protein involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein)
JNE32_21130	COG3967	Belongs to the short-chain dehydrogenases reductases (SDR) family
JNE32_21135	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
JNE32_21140	COG1486	melibiose metabolic process
JNE32_21145	COG1447	Phosphotransferase system cellobiose-specific component IIA
JNE32_21150	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
JNE32_21155	COG1440	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
JNE32_21160	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
JNE32_21160	COG3711	transcriptional antiterminator
JNE32_21170	COG2094	Belongs to the DNA glycosylase MPG family
JNE32_21175	COG0753	catalase activity
JNE32_21185	COG1277	ABC-type transport system involved in multi-copper enzyme maturation permease component
JNE32_21190	COG1131	(ABC) transporter
JNE32_21210	COG1595	DNA-templated transcription, initiation
JNE32_21215	COG1457	Belongs to the purine-cytosine permease (2.A.39) family
JNE32_21220	COG0063	ADP-dependent NAD(P)H-hydrate dehydratase activity
JNE32_21225	COG4987	ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease ATP-binding protein CydC
JNE32_21230	COG4988	ABC transporter
JNE32_21235	COG1294	oxidase, subunit
JNE32_21240	COG1271	oxidase subunit
JNE32_21245	COG3493	citrate carrier protein
JNE32_21250	COG0501	Belongs to the peptidase M48B family
JNE32_21260	COG0726	polysaccharide deacetylase
JNE32_21265	COG3842	ATPase activity
JNE32_21270	COG2508	Transcriptional regulator
JNE32_21275	COG1012	belongs to the aldehyde dehydrogenase family
JNE32_21280	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
JNE32_21290	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
JNE32_21295	COG1881	PFAM PEBP family protein
JNE32_21300	COG0583	DNA-binding transcription factor activity
JNE32_21310	COG4585	Histidine kinase
JNE32_21315	COG2197	response regulator
JNE32_21320	COG2195	Cleaves the N-terminal amino acid of tripeptides
JNE32_21330	COG4894	glucomannan catabolic process
JNE32_21335	COG0620	Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation
JNE32_21340	COG0620	Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation
JNE32_21345	COG1028	Short-chain dehydrogenase reductase Sdr
JNE32_21350	COG2057	Acyl CoA acetate 3-ketoacid CoA transferase beta subunit
JNE32_21355	COG1788	Acyl CoA acetate 3-ketoacid CoA transferase, alpha subunit
JNE32_21360	COG2610	gluconate transmembrane transporter activity
JNE32_21365	COG0500	methyltransferase
JNE32_21370	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
JNE32_21385	COG0693	protein deglycase activity
JNE32_21385	COG0753	catalase activity
JNE32_21390	COG2851	Citrate transporter
JNE32_21395	COG2273	Hydrolase Family 16
JNE32_21400	COG3711	transcriptional antiterminator
JNE32_21410	COG2270	Major facilitator Superfamily
JNE32_21415	COG0513	Belongs to the DEAD box helicase family
JNE32_21420	COG2755	lipolytic protein G-D-S-L family
JNE32_21420	COG3401	FG-GAP repeat protein
JNE32_21470	COG3209	COG3209 Rhs family protein
JNE32_21475	COG0697	spore germination
JNE32_21480	COG0789	Transcriptional regulator
JNE32_21500	COG0589	response to stress
JNE32_21505	COG2723	6-phospho-beta-galactosidase activity
JNE32_21510	COG2190	(PTS) system
JNE32_21510	COG1263	PTS System
JNE32_21510	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
JNE32_21560	COG3507	Belongs to the glycosyl hydrolase 43 family
JNE32_21575	COG2986	histidine ammonia-lyase
JNE32_21580	COG2987	Catalyzes the conversion of urocanate to 4-imidazolone- 5-propionate
JNE32_21585	COG1228	amidohydrolase
JNE32_21590	COG0010	Belongs to the arginase family
JNE32_21595	COG0833	amino acid
JNE32_21600	COG0213	The enzymes which catalyze the reversible phosphorolysis of pyrimidine nucleosides are involved in the degradation of these compounds and in their utilization as carbon and energy sources, or in the rescue of pyrimidine bases for nucleotide synthesis
JNE32_21605	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
JNE32_21610	COG0274	Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy- D-ribose 5-phosphate
JNE32_21615	COG2390	Transcriptional regulator
JNE32_21625	COG3192	ethanolamine utilization protein
JNE32_21635	COG1473	amidohydrolase
JNE32_21640	COG1126	abc transporter atp-binding protein
JNE32_21645	COG0765	amino acid transport
JNE32_21650	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
JNE32_21655	COG0456	acetyltransferase
JNE32_21660	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
JNE32_21670	COG3049	Linear amide C-N hydrolases, choloylglycine hydrolase family
JNE32_21675	COG0561	phosphatase activity
JNE32_21705	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
JNE32_21710	COG5294	Protein conserved in bacteria
JNE32_21715	COG0577	efflux transmembrane transporter activity
JNE32_21720	COG1136	(ABC) transporter
JNE32_21725	COG2205	protein histidine kinase activity
JNE32_21730	COG0745	RESPONSE REGULATOR receiver
JNE32_21735	COG0191	fructose-bisphosphate aldolase activity
JNE32_21740	COG1082	Xylose isomerase domain protein TIM barrel
JNE32_21745	COG1082	Xylose isomerase domain protein TIM barrel
JNE32_21750	COG0673	inositol 2-dehydrogenase activity
JNE32_21755	COG2814	Major facilitator Superfamily
JNE32_21760	COG1082	Xylose isomerase domain protein TIM barrel
JNE32_21765	COG3962	Belongs to the TPP enzyme family
JNE32_21770	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
JNE32_21780	COG1012	belongs to the aldehyde dehydrogenase family
JNE32_21785	COG1349	DNA-binding transcription factor activity
JNE32_21790	COG0667	Aldo Keto reductase
JNE32_21805	COG2814	Major facilitator Superfamily
JNE32_21810	COG0326	Molecular chaperone. Has ATPase activity
JNE32_21820	COG1028	Short-chain dehydrogenase reductase Sdr
JNE32_21825	COG1309	transcriptional regulator
JNE32_21830	COG1012	belongs to the aldehyde dehydrogenase family
JNE32_21840	COG1520	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
JNE32_21850	COG1714	RDD family
JNE32_21855	COG2311	Membrane
JNE32_21860	COG1917	Cupin 2, conserved barrel domain protein
JNE32_21865	COG1309	transcriptional regulator
JNE32_21870	COG1028	Short-chain dehydrogenase reductase Sdr
JNE32_21875	COG1846	Transcriptional regulator
JNE32_21880	COG1380	Effector of murein hydrolase LrgA
JNE32_21885	COG1346	cytolysis
JNE32_21890	COG5039	Polysaccharide pyruvyl transferase
JNE32_21895	COG1929	Belongs to the glycerate kinase type-1 family
JNE32_21900	COG1802	Transcriptional regulator
JNE32_21905	COG1070	Carbohydrate kinase
JNE32_21910	COG2610	gluconate transmembrane transporter activity
JNE32_21915	COG0362	Catalyzes the oxidative decarboxylation of 6- phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH
JNE32_21925	COG0450	alkyl hydroperoxide reductase
JNE32_21930	COG3634	alkyl hydroperoxide reductase activity
JNE32_21940	COG2723	6-phospho-beta-galactosidase activity
JNE32_21950	COG2188	Transcriptional regulator
JNE32_21960	COG3855	fructose 1,6-bisphosphate 1-phosphatase activity
JNE32_22005	COG1063	alcohol dehydrogenase
JNE32_22025	COG3863	Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family
JNE32_22030	COG0456	acetyltransferase
JNE32_22035	COG0457	Tetratricopeptide repeat
JNE32_22045	COG0010	Belongs to the arginase family
JNE32_22050	COG0833	amino acid
JNE32_22055	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
JNE32_22060	COG3829	transcription factor binding
JNE32_22065	COG5002	protein histidine kinase activity
JNE32_22070	COG0745	RESPONSE REGULATOR receiver
JNE32_22090	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
JNE32_22095	COG1235	May be involved in the transport of PQQ or its precursor to the periplasm
JNE32_22100	COG4853	Protein conserved in bacteria
JNE32_22105	COG4863	YycH protein
JNE32_22110	COG5002	protein histidine kinase activity
JNE32_22115	COG0745	RESPONSE REGULATOR receiver
JNE32_22145	COG0346	lactoylglutathione lyase activity
JNE32_22150	COG0305	Participates in initiation and elongation during chromosome replication
JNE32_22165	COG3093	addiction module antidote protein HigA
JNE32_22170	COG2807	transmembrane transport
JNE32_22175	COG1807	4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family
JNE32_22180	COG0359	binds to the 23S rRNA
JNE32_22185	COG3887	signaling protein consisting of a modified GGDEF domain and a DHH domain
JNE32_22190	COG4241	membrane
JNE32_22200	COG5577	PFAM Coat F domain
JNE32_22205	COG1733	regulation of RNA biosynthetic process
JNE32_22210	COG1227	inorganic diphosphatase activity
JNE32_22225	COG2271	Major facilitator Superfamily
JNE32_22230	COG0789	Transcriptional regulator
JNE32_22230	COG4978	Transcriptional regulator
JNE32_22240	COG4319	ketosteroid isomerase
JNE32_22245	COG1357	PFAM Pentapeptide repeats (8 copies)
JNE32_22250	COG2814	Major facilitator Superfamily
JNE32_22255	COG0583	DNA-binding transcription factor activity
JNE32_22260	COG2153	protein acetylation
JNE32_22270	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
JNE32_22275	COG1846	Transcriptional regulator
JNE32_22280	COG2153	protein acetylation
JNE32_22285	COG2364	Membrane
JNE32_22290	COG0456	acetyltransferase
JNE32_22295	COG2315	Protein conserved in bacteria
JNE32_22300	COG0262	Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis
JNE32_22310	COG2814	Major facilitator Superfamily
JNE32_22320	COG1331	Highly conserved protein containing a thioredoxin domain
JNE32_22325	COG1266	CAAX protease self-immunity
JNE32_22330	COG0477	Major facilitator Superfamily
JNE32_22330	COG2814	Major facilitator Superfamily
JNE32_22335	COG0110	maltose O-acetyltransferase activity
JNE32_22340	COG0346	lactoylglutathione lyase activity
JNE32_22345	COG1609	Transcriptional regulator
JNE32_22350	COG0708	Exodeoxyribonuclease III
JNE32_22355	COG0238	Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit
JNE32_22360	COG0629	single-stranded DNA binding
JNE32_22365	COG0360	Binds together with S18 to 16S ribosomal RNA
JNE32_22370	COG0012	GTP binding
JNE32_22375	COG0243	molybdopterin cofactor binding
JNE32_22380	COG4481	Protein conserved in bacteria
JNE32_22385	COG3949	Membrane
JNE32_22395	COG1475	DNA binding
JNE32_22400	COG1192	Involved in chromosome partitioning
JNE32_22410	COG1475	DNA binding
JNE32_22415	COG0357	Ribosomal RNA small subunit methyltransferase G
JNE32_22420	COG0445	tRNA wobble uridine modification
JNE32_22425	COG0486	Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34
JNE32_22430	COG1847	R3H domain protein
JNE32_22435	COG0706	membrane insertase activity
JNE32_22440	COG0594	ribonuclease P activity