AN935_00015 SM00116 Domain in cystathionine beta-synthase and other proteins. AN935_00015 SM01240 AN935_00015 AN935_00020 SM00936 Penicillin-binding protein 5, C-terminal domain AN935_00055 SM00257 Lysin motif AN935_00055 SM00636 AN935_00055 AN935_00080 SM00382 ATPases associated with a variety of cellular activities AN935_00090 SM00493 AN935_00090 AN935_00160 SM00465 GIY-YIG type nucleases (URI domain) AN935_00170 SM00966 SpoVT / AbrB like domain AN935_00185 SM01208 AN935_00185 AN935_00190 SM00493 AN935_00190 AN935_00195 SM00650 Ribosomal RNA adenine dimethylases AN935_00245 SM01400 AN935_00245 AN935_00265 SM00487 DEAD-like helicases superfamily AN935_00265 SM00490 helicase superfamily c-terminal domain AN935_00265 SM00982 AN935_00265 AN935_00265 SM01058 CarD-like/TRCF domain AN935_00270 SM00966 SpoVT / AbrB like domain AN935_00285 SM00363 S4 RNA-binding domain AN935_00305 SM00316 Ribosomal protein S1-like RNA-binding domain AN935_00320 SM00331 Sigma factor PP2C-like phosphatases AN935_00320 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain AN935_00330 SM00220 Serine/Threonine protein kinases, catalytic domain AN935_00335 SM00977 TilS substrate C-terminal domain AN935_00345 SM00382 ATPases associated with a variety of cellular activities AN935_00390 SM00905 Dihydroneopterin aldolase AN935_00400 SM00530 Helix-turn-helix XRE-family like proteins AN935_00435 SM00382 ATPases associated with a variety of cellular activities AN935_00435 SM01086 C-terminal, D2-small domain, of ClpB protein AN935_00440 SM00382 ATPases associated with a variety of cellular activities AN935_00450 SM00670 Large family of predicted nucleotide-binding domains AN935_00480 SM00840 AN935_00480 AN935_00485 SM00535 Ribonuclease III family AN935_00490 SM00967 RNA 2'-O ribose methyltransferase substrate binding AN935_00515 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. AN935_00515 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. AN935_00520 SM00649 Ribosomal protein L11/L12 AN935_00550 SM00663 RNA polymerase I subunit A N-terminus AN935_00570 SM00838 Elongation factor G C-terminus AN935_00570 SM00889 Elongation factor G, domain IV AN935_00585 SM01403 AN935_00585 AN935_00605 SM01382 AN935_00605 AN935_00605 SM01383 AN935_00605 AN935_00620 SM00322 K homology RNA-binding domain AN935_00640 SM01374 AN935_00640 AN935_00645 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. AN935_00710 SM00316 Ribosomal protein S1-like RNA-binding domain AN935_00730 SM00662 RNA polymerases D AN935_00740 SM00382 ATPases associated with a variety of cellular activities AN935_00745 SM00382 ATPases associated with a variety of cellular activities AN935_00780 SM00646 AN935_00780 AN935_00795 SM01251 AN935_00795 AN935_00820 SM00829 Enoylreductase AN935_00855 SM00342 helix_turn_helix, arabinose operon control protein AN935_00910 SM00823 Phosphopantetheine attachment site AN935_00910 SM01294 AN935_00910 AN935_00995 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AN935_01015 SM00422 helix_turn_helix, mercury resistance AN935_01015 SM00871 Bacterial transcription activator, effector binding domain AN935_01025 SM00448 cheY-homologous receiver domain AN935_01025 SM00862 Transcriptional regulatory protein, C terminal AN935_01030 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AN935_01030 SM00388 His Kinase A (phosphoacceptor) domain AN935_01110 SM00347 helix_turn_helix multiple antibiotic resistance protein AN935_01135 SM00342 helix_turn_helix, arabinose operon control protein AN935_01185 SM00342 helix_turn_helix, arabinose operon control protein AN935_01190 SM00450 Rhodanese Homology Domain AN935_01210 SM00345 helix_turn_helix gluconate operon transcriptional repressor AN935_01210 SM00866 AN935_01210 AN935_01250 SM00387 Histidine kinase-like ATPases AN935_01255 SM00448 cheY-homologous receiver domain AN935_01260 SM01130 AN935_01260 AN935_01275 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain AN935_01280 SM00345 helix_turn_helix gluconate operon transcriptional repressor AN935_01280 SM00895 AN935_01280 AN935_01285 SM00858 AN935_01285 AN935_01305 SM00448 cheY-homologous receiver domain AN935_01305 SM00862 Transcriptional regulatory protein, C terminal AN935_01310 SM00387 Histidine kinase-like ATPases AN935_01310 SM00388 His Kinase A (phosphoacceptor) domain AN935_01315 SM00382 ATPases associated with a variety of cellular activities AN935_01330 SM00093 SERine Proteinase INhibitors AN935_01340 SM00327 von Willebrand factor (vWF) type A domain AN935_01385 SM00870 AN935_01385 AN935_01405 SM00387 Histidine kinase-like ATPases AN935_01410 SM00448 cheY-homologous receiver domain AN935_01410 SM00850 LytTr DNA-binding domain AN935_01415 SM00382 ATPases associated with a variety of cellular activities AN935_01450 SM00028 Tetratricopeptide repeats AN935_01460 SM00642 Alpha-amylase domain AN935_01470 SM00382 ATPases associated with a variety of cellular activities AN935_01525 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AN935_01530 SM00116 Domain in cystathionine beta-synthase and other proteins. AN935_01530 SM00382 ATPases associated with a variety of cellular activities AN935_01565 SM00632 AN935_01565 AN935_01565 SM00642 Alpha-amylase domain AN935_01585 SM00347 helix_turn_helix multiple antibiotic resistance protein AN935_01700 SM00926 Molybdopterin oxidoreductase Fe4S4 domain AN935_01730 SM00833 Cobalamin synthesis protein cobW C-terminal domain AN935_01740 SM00062 Bacterial periplasmic substrate-binding proteins AN935_01755 SM00347 helix_turn_helix multiple antibiotic resistance protein AN935_01765 SM00382 ATPases associated with a variety of cellular activities AN935_01785 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AN935_01785 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AN935_01795 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family AN935_01810 SM00823 Phosphopantetheine attachment site AN935_01815 SM00823 Phosphopantetheine attachment site AN935_01840 SM00345 helix_turn_helix gluconate operon transcriptional repressor AN935_01855 SM00382 ATPases associated with a variety of cellular activities AN935_01865 SM00062 Bacterial periplasmic substrate-binding proteins AN935_01905 SM00710 Parallel beta-helix repeats AN935_01905 SM00722 Domain present in carbohydrate binding proteins and sugar hydrolses AN935_01930 SM00382 ATPases associated with a variety of cellular activities AN935_01940 SM00448 cheY-homologous receiver domain AN935_01940 SM00862 Transcriptional regulatory protein, C terminal AN935_01945 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AN935_01945 SM00387 Histidine kinase-like ATPases AN935_01945 SM00388 His Kinase A (phosphoacceptor) domain AN935_01950 SM00028 Tetratricopeptide repeats AN935_01980 SM00382 ATPases associated with a variety of cellular activities AN935_02010 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AN935_02015 SM00345 helix_turn_helix gluconate operon transcriptional repressor AN935_02050 SM00420 helix_turn_helix, Deoxyribose operon repressor AN935_02075 SM01329 AN935_02075 AN935_02115 SM00796 Allophanate hydrolase subunit 1 AN935_02120 SM00797 Allophanate hydrolase subunit 2 AN935_02125 SM00346 helix_turn_helix isocitrate lyase regulation AN935_02200 SM00344 helix_turn_helix ASNC type AN935_02205 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain AN935_02205 SM00437 Bacterial DNA topoisomerase I DNA-binding domain AN935_02205 SM00493 AN935_02205 AN935_02215 SM00267 diguanylate cyclase AN935_02305 SM00091 PAS domain AN935_02305 SM00387 Histidine kinase-like ATPases AN935_02310 SM00448 cheY-homologous receiver domain AN935_02330 SM00382 ATPases associated with a variety of cellular activities AN935_02385 SM00487 DEAD-like helicases superfamily AN935_02385 SM00490 helicase superfamily c-terminal domain AN935_02415 SM01005 Alanine racemase, C-terminal domain AN935_02440 SM00387 Histidine kinase-like ATPases AN935_02445 SM00331 Sigma factor PP2C-like phosphatases AN935_02465 SM00331 Sigma factor PP2C-like phosphatases AN935_02465 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain AN935_02470 SM00316 Ribosomal protein S1-like RNA-binding domain AN935_02470 SM00732 Likely ribonuclease with RNase H fold. AN935_02480 SM00731 SprT homologues. AN935_02525 SM00347 helix_turn_helix multiple antibiotic resistance protein AN935_02540 SM00422 helix_turn_helix, mercury resistance AN935_02560 SM00345 helix_turn_helix gluconate operon transcriptional repressor AN935_02570 SM00530 Helix-turn-helix XRE-family like proteins AN935_02585 SM00345 helix_turn_helix gluconate operon transcriptional repressor AN935_02585 SM00895 AN935_02585 AN935_02600 SM00357 Cold shock protein domain AN935_02605 SM01058 CarD-like/TRCF domain AN935_02610 SM00342 helix_turn_helix, arabinose operon control protein AN935_02610 SM00871 Bacterial transcription activator, effector binding domain AN935_02660 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AN935_02660 SM00387 Histidine kinase-like ATPases AN935_02660 SM00388 His Kinase A (phosphoacceptor) domain AN935_02665 SM00448 cheY-homologous receiver domain AN935_02665 SM00862 Transcriptional regulatory protein, C terminal AN935_02675 SM00091 PAS domain AN935_02675 SM00382 ATPases associated with a variety of cellular activities AN935_02700 SM00849 Metallo-beta-lactamase superfamily AN935_02705 SM00344 helix_turn_helix ASNC type AN935_02715 SM00345 helix_turn_helix gluconate operon transcriptional repressor AN935_02745 SM00450 Rhodanese Homology Domain AN935_02750 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AN935_02760 SM00422 helix_turn_helix, mercury resistance AN935_02770 SM00345 helix_turn_helix gluconate operon transcriptional repressor AN935_02780 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AN935_02795 SM00387 Histidine kinase-like ATPases AN935_02800 SM00421 helix_turn_helix, Lux Regulon AN935_02800 SM00448 cheY-homologous receiver domain AN935_02815 SM00422 helix_turn_helix, mercury resistance AN935_02815 SM00871 Bacterial transcription activator, effector binding domain AN935_02845 SM00345 helix_turn_helix gluconate operon transcriptional repressor AN935_02875 SM00354 helix_turn _helix lactose operon repressor AN935_02890 SM00382 ATPases associated with a variety of cellular activities AN935_02905 SM00347 helix_turn_helix multiple antibiotic resistance protein AN935_02930 SM00347 helix_turn_helix multiple antibiotic resistance protein AN935_02930 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AN935_02935 SM00530 Helix-turn-helix XRE-family like proteins AN935_02960 SM00345 helix_turn_helix gluconate operon transcriptional repressor AN935_02960 SM00895 AN935_02960 AN935_02965 SM00257 Lysin motif AN935_02965 SM00636 AN935_02965 AN935_02980 SM00098 Alkaline phosphatase homologues AN935_03000 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AN935_03035 SM00345 helix_turn_helix gluconate operon transcriptional repressor AN935_03035 SM00866 AN935_03035 AN935_03105 SM00382 ATPases associated with a variety of cellular activities AN935_03115 SM00881 CoA binding domain AN935_03140 SM00883 Chaperonin 10 Kd subunit AN935_03155 SM00028 Tetratricopeptide repeats AN935_03155 SM00382 ATPases associated with a variety of cellular activities AN935_03160 SM00829 Enoylreductase AN935_03185 SM00829 Enoylreductase AN935_03250 SM00460 Transglutaminase/protease-like homologues AN935_03295 SM01001 AIR carboxylase AN935_03305 SM00998 Adenylosuccinate lyase C-terminus AN935_03320 SM01211 AN935_03320 AN935_03345 SM00798 AICARFT/IMPCHase bienzyme AN935_03345 SM00851 MGS-like domain AN935_03350 SM01209 AN935_03350 AN935_03350 SM01210 AN935_03350 AN935_03355 SM00344 helix_turn_helix ASNC type AN935_03400 SM00278 Helix-hairpin-helix DNA-binding motif class 1 AN935_03400 SM00292 breast cancer carboxy-terminal domain AN935_03400 SM00532 Ligase N family AN935_03455 SM00822 AN935_03455 AN935_03455 SM00823 Phosphopantetheine attachment site AN935_03455 SM00825 Beta-ketoacyl synthase AN935_03455 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. AN935_03460 SM00823 Phosphopantetheine attachment site AN935_03465 SM00822 AN935_03465 AN935_03465 SM00823 Phosphopantetheine attachment site AN935_03465 SM00825 Beta-ketoacyl synthase AN935_03465 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. AN935_03470 SM00822 AN935_03470 AN935_03470 SM00823 Phosphopantetheine attachment site AN935_03470 SM00825 Beta-ketoacyl synthase AN935_03470 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. AN935_03475 SM00823 Phosphopantetheine attachment site AN935_03475 SM00825 Beta-ketoacyl synthase AN935_03475 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. AN935_03485 SM00098 Alkaline phosphatase homologues AN935_03515 SM00845 GatB domain AN935_03530 SM00046 Diacylglycerol kinase catalytic domain (presumed) AN935_03595 SM00028 Tetratricopeptide repeats AN935_03660 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AN935_03660 SM00387 Histidine kinase-like ATPases AN935_03665 SM00342 helix_turn_helix, arabinose operon control protein AN935_03665 SM00448 cheY-homologous receiver domain AN935_03690 SM00342 helix_turn_helix, arabinose operon control protein AN935_03795 SM00347 helix_turn_helix multiple antibiotic resistance protein AN935_03805 SM00255 Toll - interleukin 1 - resistance AN935_03870 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AN935_03875 SM00382 ATPases associated with a variety of cellular activities AN935_03885 SM00422 helix_turn_helix, mercury resistance AN935_03895 SM00382 ATPases associated with a variety of cellular activities AN935_03900 SM00487 DEAD-like helicases superfamily AN935_03900 SM00490 helicase superfamily c-terminal domain AN935_03910 SM00829 Enoylreductase AN935_03915 SM00382 ATPases associated with a variety of cellular activities AN935_03945 SM00656 AN935_03945 AN935_03955 SM00387 Histidine kinase-like ATPases AN935_03960 SM00448 cheY-homologous receiver domain AN935_03980 SM00849 Metallo-beta-lactamase superfamily AN935_04050 SM00642 Alpha-amylase domain AN935_04055 SM00345 helix_turn_helix gluconate operon transcriptional repressor AN935_04055 SM00866 AN935_04055 AN935_04085 SM00226 Low molecular weight phosphatase family AN935_04155 SM00478 endonuclease III AN935_04195 SM00861 Transketolase, pyrimidine binding domain AN935_04210 SM00382 ATPases associated with a variety of cellular activities AN935_04260 SM00382 ATPases associated with a variety of cellular activities AN935_04265 SM00382 ATPases associated with a variety of cellular activities AN935_04280 SM00342 helix_turn_helix, arabinose operon control protein AN935_04300 SM00387 Histidine kinase-like ATPases AN935_04305 SM00421 helix_turn_helix, Lux Regulon AN935_04305 SM00448 cheY-homologous receiver domain AN935_04310 SM00382 ATPases associated with a variety of cellular activities AN935_04355 SM00382 ATPases associated with a variety of cellular activities AN935_04375 SM00347 helix_turn_helix multiple antibiotic resistance protein AN935_04455 SM00287 Bacterial SH3 domain homologues AN935_04485 SM00478 endonuclease III AN935_04485 SM00525 AN935_04485 AN935_04515 SM00382 ATPases associated with a variety of cellular activities AN935_04605 SM01060 AN935_04605 AN935_04610 SM00382 ATPases associated with a variety of cellular activities AN935_04615 SM00062 Bacterial periplasmic substrate-binding proteins AN935_04645 SM00530 Helix-turn-helix XRE-family like proteins AN935_04660 SM00567 E-Z type HEAT repeats AN935_04690 SM00763 PrkA AAA domain AN935_04705 SM00347 helix_turn_helix multiple antibiotic resistance protein AN935_04735 SM00345 helix_turn_helix gluconate operon transcriptional repressor AN935_04740 SM00382 ATPases associated with a variety of cellular activities AN935_04745 SM00382 ATPases associated with a variety of cellular activities AN935_04755 SM00357 Cold shock protein domain AN935_04765 SM00267 diguanylate cyclase AN935_04780 SM00530 Helix-turn-helix XRE-family like proteins AN935_04805 SM00318 Staphylococcal nuclease homologues AN935_04815 SM00363 S4 RNA-binding domain AN935_04825 SM00116 Domain in cystathionine beta-synthase and other proteins. AN935_04875 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. AN935_04880 SM00421 helix_turn_helix, Lux Regulon AN935_04880 SM00448 cheY-homologous receiver domain AN935_04900 SM00257 Lysin motif AN935_04920 SM00098 Alkaline phosphatase homologues AN935_04925 SM00257 Lysin motif AN935_04955 SM00345 helix_turn_helix gluconate operon transcriptional repressor AN935_04985 SM00563 Phosphate acyltransferases AN935_05000 SM01091 Transporter associated domain AN935_05005 SM00422 helix_turn_helix, mercury resistance AN935_05015 SM01091 Transporter associated domain AN935_05075 SM00382 ATPases associated with a variety of cellular activities AN935_05080 SM00382 ATPases associated with a variety of cellular activities AN935_05130 SM00729 Elongator protein 3, MiaB family, Radical SAM AN935_05160 SM00382 ATPases associated with a variety of cellular activities AN935_05180 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AN935_05210 SM00347 helix_turn_helix multiple antibiotic resistance protein AN935_05240 SM00382 ATPases associated with a variety of cellular activities AN935_05325 SM01022 AN935_05325 AN935_05340 SM00849 Metallo-beta-lactamase superfamily AN935_05380 SM00829 Enoylreductase AN935_05395 SM00855 Phosphoglycerate mutase family AN935_05415 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AN935_05430 SM00914 AN935_05430 AN935_05445 SM00894 Excalibur calcium-binding domain AN935_05480 SM00347 helix_turn_helix multiple antibiotic resistance protein AN935_05615 SM00342 helix_turn_helix, arabinose operon control protein AN935_05620 SM00354 helix_turn _helix lactose operon repressor AN935_05640 SM00345 helix_turn_helix gluconate operon transcriptional repressor AN935_05685 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain AN935_05715 SM00316 Ribosomal protein S1-like RNA-binding domain AN935_05725 SM00752 Horizontally Transferred TransMembrane Domain AN935_05810 SM00859 Semialdehyde dehydrogenase, NAD binding domain AN935_05830 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain AN935_05835 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain AN935_05885 SM00825 Beta-ketoacyl synthase AN935_05895 SM00382 ATPases associated with a variety of cellular activities AN935_05900 SM00382 ATPases associated with a variety of cellular activities AN935_05945 SM00382 ATPases associated with a variety of cellular activities AN935_05950 SM00382 ATPases associated with a variety of cellular activities AN935_06015 SM01118 AN935_06015 AN935_06025 SM00954 Region found in RelA / SpoT proteins AN935_06305 SM00926 Molybdopterin oxidoreductase Fe4S4 domain AN935_06305 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region AN935_06355 SM00382 ATPases associated with a variety of cellular activities AN935_06365 SM00835 Cupin AN935_06395 SM00829 Enoylreductase AN935_06415 SM00354 helix_turn _helix lactose operon repressor AN935_06425 SM00858 AN935_06425 AN935_06440 SM00028 Tetratricopeptide repeats AN935_06455 SM00257 Lysin motif AN935_06455 SM00644 AN935_06455 AN935_06480 SM00530 Helix-turn-helix XRE-family like proteins AN935_06495 SM00382 ATPases associated with a variety of cellular activities AN935_06600 SM00257 Lysin motif AN935_06665 SM00257 Lysin motif AN935_06665 SM00644 AN935_06665 AN935_06715 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. AN935_06740 SM00382 ATPases associated with a variety of cellular activities AN935_06755 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain AN935_06765 SM00382 ATPases associated with a variety of cellular activities AN935_06825 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase AN935_06840 SM00347 helix_turn_helix multiple antibiotic resistance protein AN935_06850 SM00028 Tetratricopeptide repeats AN935_06860 SM00855 Phosphoglycerate mutase family AN935_06885 SM00382 ATPases associated with a variety of cellular activities AN935_06900 SM00448 cheY-homologous receiver domain AN935_06900 SM00862 Transcriptional regulatory protein, C terminal AN935_06905 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AN935_06905 SM00387 Histidine kinase-like ATPases AN935_06905 SM00388 His Kinase A (phosphoacceptor) domain AN935_06930 SM00116 Domain in cystathionine beta-synthase and other proteins. AN935_06930 SM00924 MgtE intracellular N domain AN935_06935 SM00422 helix_turn_helix, mercury resistance AN935_06950 SM00347 helix_turn_helix multiple antibiotic resistance protein AN935_06985 SM00559 Ku70 and Ku80 are 70kDa and 80kDa subunits of the Lupus Ku autoantigen AN935_06990 SM00052 Putative diguanylate phosphodiesterase AN935_06990 SM00267 diguanylate cyclase AN935_07050 SM00091 PAS domain AN935_07050 SM00387 Histidine kinase-like ATPases AN935_07050 SM00388 His Kinase A (phosphoacceptor) domain AN935_07095 SM01007 Class II Aldolase and Adducin N-terminal domain AN935_07120 SM00387 Histidine kinase-like ATPases AN935_07120 SM00388 His Kinase A (phosphoacceptor) domain AN935_07125 SM00347 helix_turn_helix multiple antibiotic resistance protein AN935_07140 SM00382 ATPases associated with a variety of cellular activities AN935_07140 SM01086 C-terminal, D2-small domain, of ClpB protein AN935_07170 SM00257 Lysin motif AN935_07175 SM00257 Lysin motif AN935_07180 SM00636 AN935_07180 AN935_07245 SM00354 helix_turn _helix lactose operon repressor AN935_07250 SM01061 CAT RNA binding domain AN935_07285 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AN935_07285 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AN935_07310 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) AN935_07310 SM00091 PAS domain AN935_07310 SM00387 Histidine kinase-like ATPases AN935_07310 SM00388 His Kinase A (phosphoacceptor) domain AN935_07325 SM00260 Two component signalling adaptor domain AN935_07325 SM00448 cheY-homologous receiver domain AN935_07340 SM00257 Lysin motif AN935_07355 SM00052 Putative diguanylate phosphodiesterase AN935_07455 SM00852 Probable molybdopterin binding domain AN935_07475 SM00382 ATPases associated with a variety of cellular activities AN935_07480 SM00382 ATPases associated with a variety of cellular activities AN935_07495 SM00382 ATPases associated with a variety of cellular activities AN935_07505 SM00420 helix_turn_helix, Deoxyribose operon repressor AN935_07505 SM01134 AN935_07505 AN935_07530 SM00382 ATPases associated with a variety of cellular activities AN935_07555 SM00966 SpoVT / AbrB like domain AN935_07560 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) AN935_07560 SM00091 PAS domain AN935_07560 SM00387 Histidine kinase-like ATPases AN935_07560 SM00388 His Kinase A (phosphoacceptor) domain AN935_07580 SM00849 Metallo-beta-lactamase superfamily AN935_07615 SM00861 Transketolase, pyrimidine binding domain AN935_07715 SM00838 Elongation factor G C-terminus AN935_07735 SM00670 Large family of predicted nucleotide-binding domains AN935_07760 SM00878 Biotin carboxylase C-terminal domain AN935_07810 SM00116 Domain in cystathionine beta-synthase and other proteins. AN935_07860 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. AN935_07920 SM00740 AN935_07920 AN935_07930 SM00740 AN935_07930 AN935_07990 SM00842 Cell division protein FtsA AN935_07995 SM00864 Tubulin/FtsZ family, GTPase domain AN935_07995 SM00865 Tubulin/FtsZ family, C-terminal domain AN935_08020 SM00382 ATPases associated with a variety of cellular activities AN935_08055 SM00363 S4 RNA-binding domain AN935_08080 SM00363 S4 RNA-binding domain AN935_08105 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain AN935_08110 SM00851 MGS-like domain AN935_08110 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain AN935_08110 SM01209 AN935_08110 AN935_08125 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family AN935_08175 SM00831 Cation transporter/ATPase, N-terminus AN935_08190 SM00072 Guanylate kinase homologues. AN935_08195 SM01409 AN935_08195 AN935_08205 SM00487 DEAD-like helicases superfamily AN935_08205 SM00490 helicase superfamily c-terminal domain AN935_08230 SM00331 Sigma factor PP2C-like phosphatases AN935_08230 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain AN935_08235 SM00220 Serine/Threonine protein kinases, catalytic domain AN935_08235 SM00740 AN935_08235 AN935_08250 SM00983 Thiamin pyrophosphokinase, vitamin B1 binding domain AN935_08270 SM01120 AN935_08270 AN935_08270 SM01121 AN935_08270 AN935_08285 SM00487 DEAD-like helicases superfamily AN935_08285 SM00490 helicase superfamily c-terminal domain AN935_08300 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. AN935_08305 SM00822 AN935_08305 AN935_08315 SM00358 Double-stranded RNA binding motif AN935_08315 SM00535 Ribonuclease III family AN935_08320 SM00968 SMC proteins Flexible Hinge Domain AN935_08325 SM00382 ATPases associated with a variety of cellular activities AN935_08325 SM00962 SRP54-type protein, GTPase domain AN935_08325 SM00963 SRP54-type protein, helical bundle domain AN935_08340 SM00382 ATPases associated with a variety of cellular activities AN935_08340 SM00962 SRP54-type protein, GTPase domain AN935_08340 SM00963 SRP54-type protein, helical bundle domain AN935_08400 SM00881 CoA binding domain AN935_08410 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain AN935_08410 SM00437 Bacterial DNA topoisomerase I DNA-binding domain AN935_08410 SM00493 AN935_08410 AN935_08430 SM00382 ATPases associated with a variety of cellular activities AN935_08430 SM01086 C-terminal, D2-small domain, of ClpB protein AN935_08470 SM00382 ATPases associated with a variety of cellular activities AN935_08520 SM00448 cheY-homologous receiver domain AN935_08555 SM00962 SRP54-type protein, GTPase domain AN935_08565 SM00448 cheY-homologous receiver domain AN935_08570 SM00073 Histidine Phosphotransfer domain AN935_08570 SM00260 Two component signalling adaptor domain AN935_08570 SM00387 Histidine kinase-like ATPases AN935_08570 SM01231 AN935_08570 AN935_08575 SM00260 Two component signalling adaptor domain AN935_08635 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. AN935_08645 SM00479 AN935_08645 AN935_08645 SM00481 DNA polymerase alpha chain like domain AN935_08655 SM00316 Ribosomal protein S1-like RNA-binding domain AN935_08655 SM00322 K homology RNA-binding domain AN935_08690 SM00904 Riboflavin kinase AN935_08695 SM01387 AN935_08695 AN935_08700 SM00316 Ribosomal protein S1-like RNA-binding domain AN935_08700 SM00322 K homology RNA-binding domain AN935_08735 SM00859 Semialdehyde dehydrogenase, NAD binding domain AN935_08745 SM01130 AN935_08745 AN935_08750 SM00849 Metallo-beta-lactamase superfamily AN935_08765 SM00382 ATPases associated with a variety of cellular activities AN935_08765 SM00843 AN935_08765 AN935_08770 SM00345 helix_turn_helix gluconate operon transcriptional repressor AN935_08770 SM00866 AN935_08770 AN935_08805 SM00530 Helix-turn-helix XRE-family like proteins AN935_08815 SM00852 Probable molybdopterin binding domain AN935_08820 SM00382 ATPases associated with a variety of cellular activities AN935_08830 SM00322 K homology RNA-binding domain AN935_08830 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AN935_08845 SM00829 Enoylreductase AN935_08855 SM00729 Elongator protein 3, MiaB family, Radical SAM AN935_08870 SM00533 DNA-binding domain of DNA mismatch repair MUTS family AN935_08870 SM00534 ATPase domain of DNA mismatch repair MUTS family AN935_08875 SM00853 MutL C terminal dimerisation domain AN935_08875 SM01340 AN935_08875 AN935_08920 SM00849 Metallo-beta-lactamase superfamily AN935_09005 SM00646 AN935_09005 AN935_09010 SM00382 ATPases associated with a variety of cellular activities AN935_09030 SM00422 helix_turn_helix, mercury resistance AN935_09035 SM01230 AN935_09035 AN935_09105 SM01059 Chloramphenicol acetyltransferase AN935_09150 SM00318 Staphylococcal nuclease homologues AN935_09300 SM00257 Lysin motif AN935_09305 SM00857 Resolvase, N terminal domain AN935_09315 SM00861 Transketolase, pyrimidine binding domain AN935_09340 SM00448 cheY-homologous receiver domain AN935_09410 SM01207 AN935_09410 AN935_09415 SM00881 CoA binding domain AN935_09420 SM00387 Histidine kinase-like ATPases AN935_09420 SM00433 TopoisomeraseII AN935_09425 SM00434 DNA Topoisomerase IV AN935_09445 SM01067 Cellulose binding domain AN935_09460 SM00823 Phosphopantetheine attachment site AN935_09460 SM00824 Thioesterase AN935_09465 SM00823 Phosphopantetheine attachment site AN935_09470 SM00823 Phosphopantetheine attachment site AN935_09470 SM00825 Beta-ketoacyl synthase AN935_09475 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. AN935_09520 SM00878 Biotin carboxylase C-terminal domain AN935_09560 SM00823 Phosphopantetheine attachment site AN935_09560 SM00824 Thioesterase AN935_09615 SM00829 Enoylreductase AN935_09635 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase AN935_09650 SM00822 AN935_09650 AN935_09685 SM00926 Molybdopterin oxidoreductase Fe4S4 domain AN935_09715 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AN935_09715 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AN935_09735 SM00656 AN935_09735 AN935_09765 SM00835 Cupin AN935_09810 SM00530 Helix-turn-helix XRE-family like proteins AN935_09880 SM00860 SMI1 / KNR4 family AN935_10010 SM00382 ATPases associated with a variety of cellular activities AN935_10060 SM00860 SMI1 / KNR4 family AN935_10100 SM00382 ATPases associated with a variety of cellular activities AN935_10120 SM00342 helix_turn_helix, arabinose operon control protein AN935_10135 SM00849 Metallo-beta-lactamase superfamily AN935_10140 SM00871 Bacterial transcription activator, effector binding domain AN935_10155 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AN935_10195 SM00421 helix_turn_helix, Lux Regulon AN935_10195 SM00448 cheY-homologous receiver domain AN935_10200 SM00257 Lysin motif AN935_10205 SM00341 Helicase and RNase D C-terminal AN935_10205 SM00487 DEAD-like helicases superfamily AN935_10205 SM00490 helicase superfamily c-terminal domain AN935_10205 SM00956 AN935_10205 AN935_10265 SM00861 Transketolase, pyrimidine binding domain AN935_10270 SM00327 von Willebrand factor (vWF) type A domain AN935_10275 SM00382 ATPases associated with a variety of cellular activities AN935_10285 SM00257 Lysin motif AN935_10385 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. AN935_10385 SM00245 tail specific protease AN935_10420 SM00014 Acid phosphatase homologues AN935_10470 SM00882 Coenzyme A transferase AN935_10475 SM00882 Coenzyme A transferase AN935_10525 SM01005 Alanine racemase, C-terminal domain AN935_10545 SM00347 helix_turn_helix multiple antibiotic resistance protein AN935_10585 SM00382 ATPases associated with a variety of cellular activities AN935_10635 SM00567 E-Z type HEAT repeats AN935_10635 SM00932 Scaffold protein Nfu/NifU N terminal AN935_10640 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AN935_10660 SM00357 Cold shock protein domain AN935_10700 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs AN935_10700 SM00475 5'-3' exonuclease AN935_10760 SM00354 helix_turn _helix lactose operon repressor AN935_10775 SM00491 AN935_10775 AN935_10785 SM00981 AN935_10785 AN935_10815 SM00487 DEAD-like helicases superfamily AN935_10815 SM00490 helicase superfamily c-terminal domain AN935_10875 SM00478 endonuclease III AN935_10875 SM00525 AN935_10875 AN935_10905 SM00479 AN935_10905 AN935_10905 SM00487 DEAD-like helicases superfamily AN935_10905 SM00491 AN935_10905 AN935_10945 SM00851 MGS-like domain AN935_10995 SM00914 AN935_10995 AN935_11000 SM00028 Tetratricopeptide repeats AN935_11065 SM00138 Methyltransferase, chemotaxis proteins AN935_11070 SM00562 AN935_11070 AN935_11100 SM00411 bacterial (prokaryotic) histone like domain AN935_11150 SM01240 AN935_11150 AN935_11155 SM00316 Ribosomal protein S1-like RNA-binding domain AN935_11195 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase AN935_11215 SM00257 Lysin motif AN935_11225 SM00487 DEAD-like helicases superfamily AN935_11225 SM00490 helicase superfamily c-terminal domain AN935_11265 SM00091 PAS domain AN935_11265 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AN935_11265 SM00387 Histidine kinase-like ATPases AN935_11265 SM00388 His Kinase A (phosphoacceptor) domain AN935_11270 SM00448 cheY-homologous receiver domain AN935_11270 SM00862 Transcriptional regulatory protein, C terminal AN935_11290 SM00363 S4 RNA-binding domain AN935_11375 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. AN935_11375 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. AN935_11380 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. AN935_11400 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. AN935_11410 SM00849 Metallo-beta-lactamase superfamily AN935_11420 SM00822 AN935_11420 AN935_11420 SM00823 Phosphopantetheine attachment site AN935_11420 SM00825 Beta-ketoacyl synthase AN935_11420 SM01294 AN935_11420 AN935_11425 SM00825 Beta-ketoacyl synthase AN935_11470 SM00823 Phosphopantetheine attachment site AN935_11560 SM00387 Histidine kinase-like ATPases AN935_11570 SM00936 Penicillin-binding protein 5, C-terminal domain AN935_11610 SM00919 Malic enzyme, NAD binding domain AN935_11610 SM01274 AN935_11610 AN935_11625 SM00870 AN935_11625 AN935_11630 SM00530 Helix-turn-helix XRE-family like proteins AN935_11735 SM00849 Metallo-beta-lactamase superfamily AN935_11775 SM01350 AN935_11775 AN935_11830 SM00382 ATPases associated with a variety of cellular activities AN935_11840 SM00062 Bacterial periplasmic substrate-binding proteins AN935_11840 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. AN935_11850 SM00046 Diacylglycerol kinase catalytic domain (presumed) AN935_11860 SM00422 helix_turn_helix, mercury resistance AN935_11870 SM00861 Transketolase, pyrimidine binding domain AN935_11890 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase AN935_11900 SM00091 PAS domain AN935_11900 SM00382 ATPases associated with a variety of cellular activities AN935_11945 SM00646 AN935_11945 AN935_11970 SM00448 cheY-homologous receiver domain AN935_11980 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. AN935_11995 SM00363 S4 RNA-binding domain AN935_12000 SM00861 Transketolase, pyrimidine binding domain AN935_12035 SM00878 Biotin carboxylase C-terminal domain AN935_12080 SM00382 ATPases associated with a variety of cellular activities AN935_12090 SM00841 Elongation factor P, C-terminal AN935_12090 SM01185 AN935_12090 AN935_12125 SM00529 Helix-turn-helix diphteria tox regulatory element AN935_12135 SM00450 Rhodanese Homology Domain AN935_12155 SM00487 DEAD-like helicases superfamily AN935_12155 SM00490 helicase superfamily c-terminal domain AN935_12170 SM00530 Helix-turn-helix XRE-family like proteins AN935_12230 SM00382 ATPases associated with a variety of cellular activities AN935_12240 SM00116 Domain in cystathionine beta-synthase and other proteins. AN935_12250 SM01091 Transporter associated domain AN935_12275 SM00849 Metallo-beta-lactamase superfamily AN935_12295 SM00631 AN935_12295 AN935_12315 SM00028 Tetratricopeptide repeats AN935_12355 SM00382 ATPases associated with a variety of cellular activities AN935_12360 SM00382 ATPases associated with a variety of cellular activities AN935_12440 SM00518 AP endonuclease family 2 AN935_12445 SM00487 DEAD-like helicases superfamily AN935_12445 SM00490 helicase superfamily c-terminal domain AN935_12480 SM00400 zinc finger AN935_12480 SM00493 AN935_12480 AN935_12495 SM00116 Domain in cystathionine beta-synthase and other proteins. AN935_12540 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AN935_12595 SM00729 Elongator protein 3, MiaB family, Radical SAM AN935_12610 SM00271 DnaJ molecular chaperone homology domain AN935_12630 SM00729 Elongator protein 3, MiaB family, Radical SAM AN935_12635 SM00838 Elongation factor G C-terminus AN935_12670 SM00849 Metallo-beta-lactamase superfamily AN935_12680 SM00278 Helix-hairpin-helix DNA-binding motif class 1 AN935_12700 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AN935_12710 SM01103 AN935_12710 AN935_12740 SM00644 AN935_12740 AN935_12750 SM01350 AN935_12750 AN935_12795 SM00344 helix_turn_helix ASNC type AN935_12800 SM00344 helix_turn_helix ASNC type AN935_12820 SM00450 Rhodanese Homology Domain AN935_12820 SM00849 Metallo-beta-lactamase superfamily AN935_12830 SM00450 Rhodanese Homology Domain AN935_12835 SM00450 Rhodanese Homology Domain AN935_12860 SM00829 Enoylreductase AN935_12900 SM00028 Tetratricopeptide repeats AN935_12915 SM00860 SMI1 / KNR4 family AN935_13005 SM00342 helix_turn_helix, arabinose operon control protein AN935_13015 SM00345 helix_turn_helix gluconate operon transcriptional repressor AN935_13015 SM00895 AN935_13015 AN935_13035 SM00345 helix_turn_helix gluconate operon transcriptional repressor AN935_13060 SM00382 ATPases associated with a variety of cellular activities AN935_13065 SM00382 ATPases associated with a variety of cellular activities AN935_13075 SM00014 Acid phosphatase homologues AN935_13115 SM01266 AN935_13115 AN935_13120 SM00287 Bacterial SH3 domain homologues AN935_13165 SM00342 helix_turn_helix, arabinose operon control protein AN935_13170 SM00422 helix_turn_helix, mercury resistance AN935_13175 SM00422 helix_turn_helix, mercury resistance AN935_13185 SM00829 Enoylreductase AN935_13195 SM00640 Glycosyl hydrolases family 32 AN935_13220 SM00382 ATPases associated with a variety of cellular activities AN935_13295 SM00926 Molybdopterin oxidoreductase Fe4S4 domain AN935_13295 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region AN935_13380 SM00732 Likely ribonuclease with RNase H fold. AN935_13390 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain AN935_13400 SM00382 ATPases associated with a variety of cellular activities AN935_13405 SM00062 Bacterial periplasmic substrate-binding proteins AN935_13405 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. AN935_13435 SM00382 ATPases associated with a variety of cellular activities AN935_13440 SM00028 Tetratricopeptide repeats AN935_13460 SM00382 ATPases associated with a variety of cellular activities AN935_13490 SM00287 Bacterial SH3 domain homologues AN935_13490 SM00646 AN935_13490 AN935_13500 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AN935_13500 SM00954 Region found in RelA / SpoT proteins AN935_13550 SM01323 AN935_13550 AN935_13570 SM00382 ATPases associated with a variety of cellular activities AN935_13575 SM00278 Helix-hairpin-helix DNA-binding motif class 1 AN935_13630 SM00257 Lysin motif AN935_13675 SM01317 AN935_13675 AN935_13780 SM00860 SMI1 / KNR4 family AN935_13785 SM00257 Lysin motif AN935_13785 SM00644 AN935_13785 AN935_13820 SM00047 Lysozyme subfamily 2 AN935_13900 SM00507 HNH nucleases AN935_13940 SM00891 ERCC4 domain AN935_13950 SM00885 D5 N terminal like AN935_13980 SM00530 Helix-turn-helix XRE-family like proteins AN935_13985 SM00530 Helix-turn-helix XRE-family like proteins AN935_13995 SM00857 Resolvase, N terminal domain AN935_14040 SM00257 Lysin motif AN935_14050 SM01004 Delta-aminolevulinic acid dehydratase AN935_14085 SM00382 ATPases associated with a variety of cellular activities AN935_14085 SM00464 Found in ATP-dependent protease La (LON) AN935_14090 SM00382 ATPases associated with a variety of cellular activities AN935_14095 SM00382 ATPases associated with a variety of cellular activities AN935_14095 SM00994 ClpX C4-type zinc finger AN935_14095 SM01086 C-terminal, D2-small domain, of ClpB protein AN935_14120 SM01329 AN935_14120 AN935_14125 SM00917 LeuA allosteric (dimerisation) domain AN935_14180 SM00909 Sporulation and spore germination AN935_14190 SM00347 helix_turn_helix multiple antibiotic resistance protein AN935_14195 SM00421 helix_turn_helix, Lux Regulon AN935_14235 SM00465 GIY-YIG type nucleases (URI domain) AN935_14245 SM00813 Alpha-L-arabinofuranosidase C-terminus AN935_14250 SM00893 Electron transfer flavoprotein domain AN935_14255 SM00893 Electron transfer flavoprotein domain AN935_14280 SM00463 Small MutS-related domain AN935_14280 SM00533 DNA-binding domain of DNA mismatch repair MUTS family AN935_14280 SM00534 ATPase domain of DNA mismatch repair MUTS family AN935_14285 SM00278 Helix-hairpin-helix DNA-binding motif class 1 AN935_14285 SM00481 DNA polymerase alpha chain like domain AN935_14285 SM00483 DNA polymerase X family AN935_14305 SM00873 B3/4 domain AN935_14305 SM00874 tRNA synthetase B5 domain AN935_14305 SM00896 Ferredoxin-fold anticodon binding domain AN935_14320 SM00967 RNA 2'-O ribose methyltransferase substrate binding AN935_14370 SM00813 Alpha-L-arabinofuranosidase C-terminus AN935_14400 SM01007 Class II Aldolase and Adducin N-terminal domain AN935_14465 SM00448 cheY-homologous receiver domain AN935_14465 SM00850 LytTr DNA-binding domain AN935_14470 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. AN935_14470 SM00387 Histidine kinase-like ATPases AN935_14480 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain AN935_14495 SM00382 ATPases associated with a variety of cellular activities AN935_14515 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain AN935_14550 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain AN935_14550 SM01232 AN935_14550 AN935_14555 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs AN935_14555 SM00474 3'-5' exonuclease AN935_14555 SM00475 5'-3' exonuclease AN935_14555 SM00482 DNA polymerase A domain AN935_14560 SM00091 PAS domain AN935_14560 SM00387 Histidine kinase-like ATPases AN935_14560 SM00388 His Kinase A (phosphoacceptor) domain AN935_14565 SM00448 cheY-homologous receiver domain AN935_14565 SM00862 Transcriptional regulatory protein, C terminal AN935_14575 SM01329 AN935_14575 AN935_14620 SM00919 Malic enzyme, NAD binding domain AN935_14620 SM01274 AN935_14620 AN935_14625 SM00481 DNA polymerase alpha chain like domain AN935_14655 SM00116 Domain in cystathionine beta-synthase and other proteins. AN935_14675 SM00904 Riboflavin kinase AN935_14695 SM00382 ATPases associated with a variety of cellular activities AN935_14710 SM00062 Bacterial periplasmic substrate-binding proteins AN935_14715 SM00062 Bacterial periplasmic substrate-binding proteins AN935_14730 SM00849 Metallo-beta-lactamase superfamily AN935_14755 SM00852 Probable molybdopterin binding domain AN935_14815 SM00981 AN935_14815 AN935_14845 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. AN935_14850 SM00267 diguanylate cyclase AN935_14855 SM00363 S4 RNA-binding domain AN935_14855 SM01390 AN935_14855 AN935_14865 SM00363 S4 RNA-binding domain AN935_14880 SM00116 Domain in cystathionine beta-synthase and other proteins. AN935_14900 SM00354 helix_turn _helix lactose operon repressor AN935_14905 SM00830 Chorismate mutase type II AN935_14930 SM00382 ATPases associated with a variety of cellular activities AN935_14930 SM00843 AN935_14930 AN935_14965 SM00919 Malic enzyme, NAD binding domain AN935_14965 SM01274 AN935_14965 AN935_14970 SM00849 Metallo-beta-lactamase superfamily AN935_14990 SM00642 Alpha-amylase domain AN935_14995 SM00046 Diacylglycerol kinase catalytic domain (presumed) AN935_15030 SM00382 ATPases associated with a variety of cellular activities AN935_15035 SM00420 helix_turn_helix, Deoxyribose operon repressor AN935_15040 SM00363 S4 RNA-binding domain AN935_15090 SM00342 helix_turn_helix, arabinose operon control protein AN935_15115 SM00729 Elongator protein 3, MiaB family, Radical SAM AN935_15115 SM00876 Biotin and Thiamin Synthesis associated domain AN935_15150 SM00354 helix_turn _helix lactose operon repressor AN935_15175 SM00450 Rhodanese Homology Domain AN935_15190 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) AN935_15190 SM00091 PAS domain AN935_15210 SM00382 ATPases associated with a variety of cellular activities AN935_15215 SM00387 Histidine kinase-like ATPases AN935_15220 SM00448 cheY-homologous receiver domain AN935_15220 SM00862 Transcriptional regulatory protein, C terminal AN935_15230 SM00382 ATPases associated with a variety of cellular activities AN935_15245 SM00382 ATPases associated with a variety of cellular activities AN935_15250 SM00345 helix_turn_helix gluconate operon transcriptional repressor AN935_15265 SM00729 Elongator protein 3, MiaB family, Radical SAM AN935_15325 SM00382 ATPases associated with a variety of cellular activities AN935_15365 SM01234 AN935_15365 AN935_15370 SM00947 Carbonic anhydrase AN935_15405 SM00382 ATPases associated with a variety of cellular activities AN935_15415 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain AN935_15475 SM00642 Alpha-amylase domain AN935_15535 SM00244 prohibitin homologues AN935_15590 SM00047 Lysozyme subfamily 2 AN935_15640 SM00420 helix_turn_helix, Deoxyribose operon repressor AN935_15640 SM01134 AN935_15640 AN935_15645 SM01007 Class II Aldolase and Adducin N-terminal domain AN935_15650 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AN935_15650 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AN935_15650 SM00319 Homologues of the ligand binding domain of Tar AN935_15655 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AN935_15655 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AN935_15655 SM00319 Homologues of the ligand binding domain of Tar AN935_15665 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AN935_15665 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AN935_15665 SM00319 Homologues of the ligand binding domain of Tar AN935_15690 SM00642 Alpha-amylase domain AN935_15695 SM01091 Transporter associated domain AN935_15750 SM00316 Ribosomal protein S1-like RNA-binding domain AN935_15760 SM00344 helix_turn_helix ASNC type AN935_15780 SM00387 Histidine kinase-like ATPases AN935_15780 SM00388 His Kinase A (phosphoacceptor) domain AN935_15785 SM01298 AN935_15785 AN935_15790 SM00479 AN935_15790 AN935_15820 SM00091 PAS domain AN935_15820 SM00387 Histidine kinase-like ATPases AN935_15825 SM00448 cheY-homologous receiver domain AN935_15835 SM00382 ATPases associated with a variety of cellular activities AN935_15900 SM00421 helix_turn_helix, Lux Regulon AN935_15900 SM00448 cheY-homologous receiver domain AN935_15905 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. AN935_15905 SM00387 Histidine kinase-like ATPases AN935_15930 SM00052 Putative diguanylate phosphodiesterase AN935_15975 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AN935_16020 SM01002 Alanine dehydrogenase/PNT, C-terminal domain AN935_16020 SM01003 Alanine dehydrogenase/PNT, N-terminal domain AN935_16030 SM00923 MbtH-like protein AN935_16035 SM00823 Phosphopantetheine attachment site AN935_16035 SM00824 Thioesterase AN935_16120 SM01240 AN935_16120 AN935_16220 SM00729 Elongator protein 3, MiaB family, Radical SAM AN935_16305 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain AN935_16345 SM00382 ATPases associated with a variety of cellular activities AN935_16350 SM00345 helix_turn_helix gluconate operon transcriptional repressor AN935_16350 SM00866 AN935_16350 AN935_16380 SM00465 GIY-YIG type nucleases (URI domain) AN935_16405 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AN935_16430 SM00382 ATPases associated with a variety of cellular activities AN935_16455 SM00382 ATPases associated with a variety of cellular activities AN935_16455 SM00930 AN935_16455 AN935_16470 SM00493 AN935_16470 AN935_16525 SM00347 helix_turn_helix multiple antibiotic resistance protein AN935_16555 SM00382 ATPases associated with a variety of cellular activities AN935_16580 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. AN935_16585 SM00448 cheY-homologous receiver domain AN935_16585 SM00862 Transcriptional regulatory protein, C terminal AN935_16590 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AN935_16590 SM00387 Histidine kinase-like ATPases AN935_16590 SM00388 His Kinase A (phosphoacceptor) domain AN935_16630 SM00421 helix_turn_helix, Lux Regulon AN935_16630 SM00448 cheY-homologous receiver domain AN935_16635 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AN935_16635 SM00387 Histidine kinase-like ATPases AN935_16670 SM00382 ATPases associated with a variety of cellular activities AN935_16695 SM00387 Histidine kinase-like ATPases AN935_16695 SM00388 His Kinase A (phosphoacceptor) domain AN935_16700 SM00448 cheY-homologous receiver domain AN935_16700 SM00862 Transcriptional regulatory protein, C terminal AN935_16720 SM00835 Cupin AN935_16735 SM00382 ATPases associated with a variety of cellular activities AN935_16745 SM00382 ATPases associated with a variety of cellular activities AN935_16765 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AN935_16940 SM00316 Ribosomal protein S1-like RNA-binding domain AN935_16940 SM00357 Cold shock protein domain AN935_16940 SM00955 AN935_16940 AN935_16960 SM00530 Helix-turn-helix XRE-family like proteins AN935_16965 SM00530 Helix-turn-helix XRE-family like proteins AN935_16970 SM00530 Helix-turn-helix XRE-family like proteins AN935_16980 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AN935_16980 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AN935_17000 SM00116 Domain in cystathionine beta-synthase and other proteins. AN935_17000 SM00382 ATPases associated with a variety of cellular activities AN935_17025 SM00116 Domain in cystathionine beta-synthase and other proteins. AN935_17025 SM00382 ATPases associated with a variety of cellular activities AN935_17055 SM01192 AN935_17055 AN935_17055 SM01193 AN935_17055 AN935_17080 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain AN935_17095 SM00345 helix_turn_helix gluconate operon transcriptional repressor AN935_17120 SM00636 AN935_17120 AN935_17140 SM00421 helix_turn_helix, Lux Regulon AN935_17140 SM00448 cheY-homologous receiver domain AN935_17155 SM00382 ATPases associated with a variety of cellular activities AN935_17165 SM00331 Sigma factor PP2C-like phosphatases AN935_17195 SM00354 helix_turn _helix lactose operon repressor AN935_17200 SM00345 helix_turn_helix gluconate operon transcriptional repressor AN935_17200 SM00895 AN935_17200 AN935_17295 SM00530 Helix-turn-helix XRE-family like proteins AN935_17340 SM00640 Glycosyl hydrolases family 32 AN935_17385 SM00642 Alpha-amylase domain AN935_17415 SM00642 Alpha-amylase domain AN935_17420 SM00354 helix_turn _helix lactose operon repressor AN935_17440 SM00947 Carbonic anhydrase AN935_17455 SM00382 ATPases associated with a variety of cellular activities AN935_17460 SM00387 Histidine kinase-like ATPases AN935_17460 SM00388 His Kinase A (phosphoacceptor) domain AN935_17465 SM00448 cheY-homologous receiver domain AN935_17465 SM00862 Transcriptional regulatory protein, C terminal AN935_17515 SM00028 Tetratricopeptide repeats AN935_17520 SM00382 ATPases associated with a variety of cellular activities AN935_17625 SM00345 helix_turn_helix gluconate operon transcriptional repressor AN935_17625 SM00866 AN935_17625 AN935_17635 SM00347 helix_turn_helix multiple antibiotic resistance protein AN935_17675 SM00382 ATPases associated with a variety of cellular activities AN935_17680 SM00487 DEAD-like helicases superfamily AN935_17680 SM00490 helicase superfamily c-terminal domain AN935_17710 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. AN935_17720 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. AN935_17720 SM00245 tail specific protease AN935_17730 SM00382 ATPases associated with a variety of cellular activities AN935_17745 SM00937 AN935_17745 AN935_17750 SM00957 SecA DEAD-like domain AN935_17750 SM00958 SecA preprotein cross-linking domain AN935_17840 SM00487 DEAD-like helicases superfamily AN935_17840 SM00490 helicase superfamily c-terminal domain AN935_17850 SM00421 helix_turn_helix, Lux Regulon AN935_17850 SM00448 cheY-homologous receiver domain AN935_17855 SM00387 Histidine kinase-like ATPases AN935_17895 SM00984 UDP binding domain AN935_17920 SM00646 AN935_17920 AN935_17965 SM00382 ATPases associated with a variety of cellular activities AN935_18045 SM00047 Lysozyme subfamily 2 AN935_18045 SM00287 Bacterial SH3 domain homologues AN935_18100 SM00854 Bacterial capsule synthesis protein PGA_cap AN935_18115 SM00354 helix_turn _helix lactose operon repressor AN935_18130 SM00382 ATPases associated with a variety of cellular activities AN935_18145 SM00287 Bacterial SH3 domain homologues AN935_18185 SM00903 Flavin reductase like domain AN935_18200 SM00344 helix_turn_helix ASNC type AN935_18255 SM00984 UDP binding domain AN935_18285 SM00487 DEAD-like helicases superfamily AN935_18285 SM00490 helicase superfamily c-terminal domain AN935_18295 SM00420 helix_turn_helix, Deoxyribose operon repressor AN935_18295 SM01134 AN935_18295 AN935_18330 SM00448 cheY-homologous receiver domain AN935_18330 SM00862 Transcriptional regulatory protein, C terminal AN935_18335 SM00387 Histidine kinase-like ATPases AN935_18335 SM00388 His Kinase A (phosphoacceptor) domain AN935_18335 SM00448 cheY-homologous receiver domain AN935_18350 SM00028 Tetratricopeptide repeats AN935_18375 SM00347 helix_turn_helix multiple antibiotic resistance protein AN935_18385 SM00710 Parallel beta-helix repeats AN935_18385 SM00722 Domain present in carbohydrate binding proteins and sugar hydrolses AN935_18415 SM00938 Nitrogen regulatory protein P-II AN935_18420 SM00014 Acid phosphatase homologues AN935_18475 SM00858 AN935_18475 AN935_18485 SM00155 Phospholipase D. Active site motifs. AN935_18490 SM00422 helix_turn_helix, mercury resistance AN935_18525 SM00382 ATPases associated with a variety of cellular activities AN935_18530 SM00382 ATPases associated with a variety of cellular activities AN935_18560 SM00028 Tetratricopeptide repeats AN935_18565 SM00729 Elongator protein 3, MiaB family, Radical SAM AN935_18580 SM00327 von Willebrand factor (vWF) type A domain AN935_18585 SM00327 von Willebrand factor (vWF) type A domain AN935_18625 SM00382 ATPases associated with a variety of cellular activities AN935_18690 SM00226 Low molecular weight phosphatase family AN935_18730 SM00937 AN935_18730 AN935_18750 SM00919 Malic enzyme, NAD binding domain AN935_18750 SM01274 AN935_18750 AN935_18765 SM00357 Cold shock protein domain AN935_18765 SM00382 ATPases associated with a variety of cellular activities AN935_18765 SM00959 Rho termination factor, N-terminal domain AN935_18795 SM00448 cheY-homologous receiver domain AN935_18825 SM00155 Phospholipase D. Active site motifs. AN935_18845 SM00382 ATPases associated with a variety of cellular activities AN935_18850 SM00155 Phospholipase D. Active site motifs. AN935_18875 SM00926 Molybdopterin oxidoreductase Fe4S4 domain AN935_18890 SM00100 Cyclic nucleotide-monophosphate binding domain AN935_18890 SM00419 helix_turn_helix, cAMP Regulatory protein AN935_18900 SM00836 DALR anticodon binding domain AN935_18900 SM01016 Arginyl tRNA synthetase N terminal dom AN935_18915 SM00729 Elongator protein 3, MiaB family, Radical SAM AN935_18965 SM00028 Tetratricopeptide repeats AN935_19010 SM00347 helix_turn_helix multiple antibiotic resistance protein AN935_19015 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain AN935_19040 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AN935_19140 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase AN935_19220 SM00986 Uracil DNA glycosylase superfamily AN935_19220 SM00987 UreE urease accessory protein, C-terminal domain AN935_19240 SM00640 Glycosyl hydrolases family 32 AN935_19255 SM01061 CAT RNA binding domain AN935_19405 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase AN935_19435 SM01061 CAT RNA binding domain AN935_19450 SM00347 helix_turn_helix multiple antibiotic resistance protein AN935_19465 SM00530 Helix-turn-helix XRE-family like proteins AN935_19480 SM00954 Region found in RelA / SpoT proteins AN935_19565 SM01060 AN935_19565 AN935_19580 SM00382 ATPases associated with a variety of cellular activities AN935_19615 SM00382 ATPases associated with a variety of cellular activities AN935_19620 SM00382 ATPases associated with a variety of cellular activities AN935_19655 SM00382 ATPases associated with a variety of cellular activities AN935_19695 SM00421 helix_turn_helix, Lux Regulon AN935_19695 SM00448 cheY-homologous receiver domain AN935_19735 SM00882 Coenzyme A transferase AN935_19740 SM00882 Coenzyme A transferase AN935_19775 SM01060 AN935_19775 AN935_19805 SM01061 CAT RNA binding domain AN935_19820 SM00487 DEAD-like helicases superfamily AN935_19820 SM00490 helicase superfamily c-terminal domain AN935_20050 SM00941 Pyrimidine nucleoside phosphorylase C-terminal domain AN935_20060 SM01133 AN935_20060 AN935_20090 SM00382 ATPases associated with a variety of cellular activities AN935_20100 SM00062 Bacterial periplasmic substrate-binding proteins AN935_20165 SM00382 ATPases associated with a variety of cellular activities AN935_20170 SM00387 Histidine kinase-like ATPases AN935_20175 SM00448 cheY-homologous receiver domain AN935_20175 SM00862 Transcriptional regulatory protein, C terminal AN935_20230 SM00420 helix_turn_helix, Deoxyribose operon repressor AN935_20230 SM01134 AN935_20230 AN935_20275 SM00387 Histidine kinase-like ATPases AN935_20310 SM00422 helix_turn_helix, mercury resistance AN935_20340 SM00347 helix_turn_helix multiple antibiotic resistance protein AN935_20380 SM00345 helix_turn_helix gluconate operon transcriptional repressor AN935_20380 SM00895 AN935_20380 AN935_20395 SM01350 AN935_20395 AN935_20425 SM00345 helix_turn_helix gluconate operon transcriptional repressor AN935_20425 SM00866 AN935_20425 AN935_20435 SM00487 DEAD-like helicases superfamily AN935_20510 SM00091 PAS domain AN935_20510 SM00382 ATPases associated with a variety of cellular activities AN935_20515 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AN935_20515 SM00387 Histidine kinase-like ATPases AN935_20515 SM00388 His Kinase A (phosphoacceptor) domain AN935_20520 SM00448 cheY-homologous receiver domain AN935_20520 SM00862 Transcriptional regulatory protein, C terminal AN935_20540 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. AN935_20545 SM00849 Metallo-beta-lactamase superfamily AN935_20560 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) AN935_20560 SM00091 PAS domain AN935_20560 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AN935_20560 SM00387 Histidine kinase-like ATPases AN935_20560 SM00388 His Kinase A (phosphoacceptor) domain AN935_20565 SM00448 cheY-homologous receiver domain AN935_20565 SM00862 Transcriptional regulatory protein, C terminal AN935_20590 SM00788 Adenylosuccinate synthetase AN935_20600 SM00382 ATPases associated with a variety of cellular activities AN935_20640 SM00267 diguanylate cyclase AN935_20665 SM01131 AN935_20665 AN935_20740 SM00849 Metallo-beta-lactamase superfamily AN935_20750 SM00347 helix_turn_helix multiple antibiotic resistance protein AN935_20785 SM00422 helix_turn_helix, mercury resistance AN935_20835 SM00354 helix_turn _helix lactose operon repressor AN935_20865 SM00926 Molybdopterin oxidoreductase Fe4S4 domain AN935_20885 SM00470 ParB-like nuclease domain AN935_20900 SM00470 ParB-like nuclease domain AN935_20910 SM01228 AN935_20910 AN935_20920 SM00393 Putative single-stranded nucleic acids-binding domain AN935_20920 SM01245 AN935_20920 AN935_20940 SM00382 ATPases associated with a variety of cellular activities AN935_20940 SM00760 Bacterial dnaA protein helix-turn-helix domain AN935_20945 SM00480 DNA polymerase III beta subunit AN935_20965 SM00387 Histidine kinase-like ATPases AN935_20965 SM00433 TopoisomeraseII AN935_20970 SM00434 DNA Topoisomerase IV