locus-tag class description LJC78_00005 PF00308 Bacterial dnaA protein LJC78_00005 PF08299 Bacterial dnaA protein helix-turn-helix LJC78_00005 PF11638 DnaA N-terminal domain LJC78_00010 PF00712 DNA polymerase III beta subunit, N-terminal domain LJC78_00010 PF02767 DNA polymerase III beta subunit, central domain LJC78_00010 PF02768 DNA polymerase III beta subunit, C-terminal domain LJC78_00020 PF02463 RecF/RecN/SMC N terminal domain LJC78_00025 PF04025 Domain of unknown function (DUF370) LJC78_00030 PF00204 DNA gyrase B LJC78_00030 PF00986 DNA gyrase B subunit, carboxyl terminus LJC78_00030 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LJC78_00030 PF01751 Toprim domain LJC78_00035 PF03989 DNA gyrase C-terminal domain, beta-propeller LJC78_00035 PF00521 DNA gyrase/topoisomerase IV, subunit A LJC78_00065 PF14175 YaaC-like Protein LJC78_00070 PF00478 IMP dehydrogenase / GMP reductase domain LJC78_00070 PF00571 CBS domain LJC78_00075 PF07943 Penicillin-binding protein 5, C-terminal domain LJC78_00075 PF00768 D-alanyl-D-alanine carboxypeptidase LJC78_00080 PF01680 SOR/SNZ family LJC78_00085 PF01174 SNO glutamine amidotransferase family LJC78_00090 PF02403 Seryl-tRNA synthetase N-terminal domain LJC78_00090 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) LJC78_00100 PF01712 Deoxynucleoside kinase LJC78_00105 PF01712 Deoxynucleoside kinase LJC78_00110 PF00704 Glycosyl hydrolases family 18 LJC78_00110 PF01476 LysM domain LJC78_00115 PF00857 Isochorismatase family LJC78_00120 PF14437 MafB19-like deaminase LJC78_00130 PF12169 DNA polymerase III subunits gamma and tau domain III LJC78_00135 PF02575 YbaB/EbfC DNA-binding family LJC78_00140 PF13662 Toprim domain LJC78_00140 PF02132 RecR protein LJC78_00145 PF10704 Protein of unknown function (DUF2508) LJC78_00150 PF07441 SigmaK-factor processing regulatory protein BofA LJC78_00180 PF10764 Inhibitor of sigma-G Gin LJC78_00185 PF10112 5-bromo-4-chloroindolyl phosphate hydrolysis protein LJC78_00190 PF05816 Toxic anion resistance protein (TelA) LJC78_00195 PF01276 Orn/Lys/Arg decarboxylase, major domain LJC78_00195 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain LJC78_00200 PF02223 Thymidylate kinase LJC78_00205 PF06153 Cyclic-di-AMP receptor LJC78_00210 PF03885 Protein of unknown function (DUF327) LJC78_00215 PF09115 DNA polymerase III, delta subunit, C terminal LJC78_00220 PF04468 PSP1 C-terminal conserved region LJC78_00225 PF06156 Initiation control protein YabA LJC78_00230 PF05175 Methyltransferase small domain LJC78_00235 PF01541 GIY-YIG catalytic domain LJC78_00240 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases LJC78_00245 PF18277 AbrB C-terminal domain LJC78_00245 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin LJC78_00250 PF08264 Anticodon-binding domain of tRNA LJC78_00250 PF09334 tRNA synthetases class I (M) LJC78_00250 PF01588 Putative tRNA binding domain LJC78_00255 PF01026 TatD related DNase LJC78_00260 PF06725 3D domain LJC78_00260 PF03990 G5-linked-Ubiquitin-like domain LJC78_00260 PF07501 G5 domain LJC78_00265 PF13331 Domain of unknown function (DUF4093) LJC78_00265 PF13662 Toprim domain LJC78_00270 PF00398 Ribosomal RNA adenine dimethylase LJC78_00275 PF05582 YabG peptidase U57 LJC78_00280 PF06257 Biofilm formation stimulator VEG LJC78_00285 PF00269 Small, acid-soluble spore proteins, alpha/beta type LJC78_00290 PF00288 GHMP kinases N terminal domain LJC78_00290 PF08544 GHMP kinases C terminal LJC78_00295 PF00156 Phosphoribosyl transferase domain LJC78_00295 PF09182 Bacterial purine repressor, N-terminal LJC78_00300 PF01042 Endoribonuclease L-PSP LJC78_00305 PF04026 SpoVG LJC78_00310 PF00132 Bacterial transferase hexapeptide (six repeats) LJC78_00310 PF00483 Nucleotidyl transferase LJC78_00315 PF14572 Phosphoribosyl synthetase-associated domain LJC78_00315 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase LJC78_00320 PF01386 Ribosomal L25p family LJC78_00320 PF14693 Ribosomal protein TL5, C-terminal domain LJC78_00325 PF01195 Peptidyl-tRNA hydrolase LJC78_00330 PF10955 Protein of unknown function (DUF2757) LJC78_00335 PF17757 UvrB interaction domain LJC78_00335 PF00271 Helicase conserved C-terminal domain LJC78_00335 PF03461 TRCF domain LJC78_00335 PF02559 CarD-like/TRCF domain LJC78_00335 PF00270 DEAD/DEAH box helicase LJC78_00340 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin LJC78_00340 PF15714 Stage V sporulation protein T C-terminal, transcription factor LJC78_00345 PF01943 Polysaccharide biosynthesis protein LJC78_00345 PF14667 Polysaccharide biosynthesis C-terminal domain LJC78_00350 PF03819 MazG nucleotide pyrophosphohydrolase domain LJC78_00350 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases LJC78_00355 PF01479 S4 domain LJC78_00360 PF07873 YabP family LJC78_00365 PF09578 Spore cortex protein YabQ (Spore_YabQ) LJC78_00370 PF04977 Septum formation initiator LJC78_00375 PF00575 S1 RNA binding domain LJC78_00390 PF07228 Stage II sporulation protein E (SpoIIE) LJC78_00395 PF00092 von Willebrand factor type A domain LJC78_00400 PF00069 Protein kinase domain LJC78_00405 PF11734 TilS substrate C-terminal domain LJC78_00405 PF01171 PP-loop family LJC78_00405 PF09179 TilS substrate binding domain LJC78_00410 PF00156 Phosphoribosyl transferase domain LJC78_00415 PF00004 ATPase family associated with various cellular activities (AAA) LJC78_00415 PF17862 AAA+ lid domain LJC78_00415 PF06480 FtsH Extracellular LJC78_00415 PF01434 Peptidase family M41 LJC78_00420 PF03309 Type III pantothenate kinase LJC78_00425 PF01430 Hsp33 protein LJC78_00430 PF13145 PPIC-type PPIASE domain LJC78_00435 PF00291 Pyridoxal-phosphate dependent enzyme LJC78_00440 PF04715 Anthranilate synthase component I, N terminal region LJC78_00440 PF00425 chorismate binding enzyme LJC78_00445 PF00117 Glutamine amidotransferase class-I LJC78_00450 PF01063 Amino-transferase class IV LJC78_00455 PF00809 Pterin binding enzyme LJC78_00460 PF02152 Dihydroneopterin aldolase LJC78_00465 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) LJC78_00470 PF01381 Helix-turn-helix LJC78_00475 PF01207 Dihydrouridine synthase (Dus) LJC78_00480 PF00152 tRNA synthetases class II (D, K and N) LJC78_00480 PF01336 OB-fold nucleic acid binding domain LJC78_00560 PF05848 CtsR N-terminal HTH domain LJC78_00560 PF17727 CtsR C-terminal dimerization domain LJC78_00565 PF02151 UvrB/uvrC motif LJC78_00570 PF00217 ATP:guanido phosphotransferase, C-terminal catalytic domain LJC78_00575 PF02861 Clp amino terminal domain, pathogenicity island component LJC78_00575 PF17871 AAA lid domain LJC78_00575 PF10431 C-terminal, D2-small domain, of ClpB protein LJC78_00575 PF00004 ATPase family associated with various cellular activities (AAA) LJC78_00575 PF07724 AAA domain (Cdc48 subfamily) LJC78_00580 PF18073 Rubredoxin metal binding domain LJC78_00585 PF10635 DisA bacterial checkpoint controller linker region LJC78_00585 PF02457 DisA bacterial checkpoint controller nucleotide-binding LJC78_00595 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase LJC78_00600 PF02542 YgbB family LJC78_00605 PF00749 tRNA synthetases class I (E and Q), catalytic domain LJC78_00610 PF00132 Bacterial transferase hexapeptide (six repeats) LJC78_00610 PF06426 Serine acetyltransferase, N-terminal LJC78_00615 PF09190 DALR domain LJC78_00615 PF01406 tRNA synthetases class I (C) catalytic domain LJC78_00620 PF00636 Ribonuclease III domain LJC78_00625 PF00588 SpoU rRNA Methylase family LJC78_00625 PF08032 RNA 2'-O ribose methyltransferase substrate binding LJC78_00630 PF05991 YacP-like NYN domain LJC78_00635 PF04542 Sigma-70 region 2 LJC78_00635 PF08281 Sigma-70, region 4 LJC78_00640 PF00471 Ribosomal protein L33 LJC78_00645 PF00584 SecE/Sec61-gamma subunits of protein translocation complex LJC78_00650 PF02357 Transcription termination factor nusG LJC78_00650 PF00467 KOW motif LJC78_00655 PF00298 Ribosomal protein L11, RNA binding domain LJC78_00655 PF03946 Ribosomal protein L11, N-terminal domain LJC78_00660 PF00687 Ribosomal protein L1p/L10e family LJC78_00665 PF00466 Ribosomal protein L10 LJC78_00670 PF00542 Ribosomal protein L7/L12 C-terminal domain LJC78_00670 PF16320 Ribosomal protein L7/L12 dimerisation domain LJC78_00675 PF05175 Methyltransferase small domain LJC78_00680 PF04563 RNA polymerase beta subunit LJC78_00680 PF04561 RNA polymerase Rpb2, domain 2 LJC78_00680 PF04565 RNA polymerase Rpb2, domain 3 LJC78_00680 PF10385 RNA polymerase beta subunit external 1 domain LJC78_00680 PF00562 RNA polymerase Rpb2, domain 6 LJC78_00680 PF04560 RNA polymerase Rpb2, domain 7 LJC78_00685 PF04998 RNA polymerase Rpb1, domain 5 LJC78_00685 PF05000 RNA polymerase Rpb1, domain 4 LJC78_00685 PF00623 RNA polymerase Rpb1, domain 2 LJC78_00685 PF04997 RNA polymerase Rpb1, domain 1 LJC78_00685 PF04983 RNA polymerase Rpb1, domain 3 LJC78_00690 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family LJC78_00695 PF00164 Ribosomal protein S12/S23 LJC78_00700 PF00177 Ribosomal protein S7p/S5e LJC78_00705 PF00679 Elongation factor G C-terminus LJC78_00705 PF14492 Elongation Factor G, domain II LJC78_00705 PF03764 Elongation factor G, domain IV LJC78_00705 PF00009 Elongation factor Tu GTP binding domain LJC78_00705 PF03144 Elongation factor Tu domain 2 LJC78_00710 PF00009 Elongation factor Tu GTP binding domain LJC78_00710 PF03144 Elongation factor Tu domain 2 LJC78_00710 PF03143 Elongation factor Tu C-terminal domain LJC78_00715 PF12146 Serine aminopeptidase, S33 LJC78_00720 PF00338 Ribosomal protein S10p/S20e LJC78_00725 PF00297 Ribosomal protein L3 LJC78_00730 PF00573 Ribosomal protein L4/L1 family LJC78_00735 PF00276 Ribosomal protein L23 LJC78_00740 PF00181 Ribosomal Proteins L2, RNA binding domain LJC78_00740 PF03947 Ribosomal Proteins L2, C-terminal domain LJC78_00745 PF00203 Ribosomal protein S19 LJC78_00750 PF00237 Ribosomal protein L22p/L17e LJC78_00755 PF07650 KH domain LJC78_00755 PF00189 Ribosomal protein S3, C-terminal domain LJC78_00760 PF00252 Ribosomal protein L16p/L10e LJC78_00765 PF00831 Ribosomal L29 protein LJC78_00770 PF00366 Ribosomal protein S17 LJC78_00775 PF00238 Ribosomal protein L14p/L23e LJC78_00780 PF00467 KOW motif LJC78_00780 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 LJC78_00785 PF00281 Ribosomal protein L5 LJC78_00785 PF00673 ribosomal L5P family C-terminus LJC78_00790 PF00253 Ribosomal protein S14p/S29e LJC78_00795 PF00410 Ribosomal protein S8 LJC78_00800 PF00347 Ribosomal protein L6 LJC78_00805 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast LJC78_00810 PF00333 Ribosomal protein S5, N-terminal domain LJC78_00810 PF03719 Ribosomal protein S5, C-terminal domain LJC78_00815 PF00327 Ribosomal protein L30p/L7e LJC78_00820 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A LJC78_00825 PF00344 SecY translocase LJC78_00830 PF05191 Adenylate kinase, active site lid LJC78_00835 PF00557 Metallopeptidase family M24 LJC78_00845 PF01176 Translation initiation factor 1A / IF-1 LJC78_00850 PF00444 Ribosomal protein L36 LJC78_00855 PF00416 Ribosomal protein S13/S18 LJC78_00860 PF00411 Ribosomal protein S11 LJC78_00865 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain LJC78_00865 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain LJC78_00865 PF01000 RNA polymerase Rpb3/RpoA insert domain LJC78_00870 PF01196 Ribosomal protein L17 LJC78_00875 PF00005 ABC transporter LJC78_00880 PF00005 ABC transporter LJC78_00885 PF02361 Cobalt transport protein LJC78_00890 PF01416 tRNA pseudouridine synthase LJC78_00895 PF00572 Ribosomal protein L13 LJC78_00900 PF00380 Ribosomal protein S9/S16 LJC78_00905 PF08241 Methyltransferase domain LJC78_00910 PF10730 Protein of unknown function (DUF2521) LJC78_00915 PF01520 N-acetylmuramoyl-L-alanine amidase LJC78_00920 PF10609 NUBPL iron-transfer P-loop NTPase LJC78_00925 PF17898 Spore germination GerD central core domain LJC78_00930 PF14089 KinB-signalling pathway activation in sporulation LJC78_00935 PF01522 Polysaccharide deacetylase LJC78_01020 PF00916 Sulfate permease family LJC78_01020 PF01740 STAS domain LJC78_01025 PF01758 Sodium Bile acid symporter family LJC78_01030 PF00756 Putative esterase LJC78_01035 PF01032 FecCD transport family LJC78_01040 PF01032 FecCD transport family LJC78_01045 PF01497 Periplasmic binding protein LJC78_01050 PF12833 Helix-turn-helix domain LJC78_01050 PF01497 Periplasmic binding protein LJC78_01055 PF07075 Protein of unknown function (DUF1343) LJC78_01060 PF00933 Glycosyl hydrolase family 3 N terminal domain LJC78_01060 PF01915 Glycosyl hydrolase family 3 C-terminal domain LJC78_01065 PF00144 Beta-lactamase LJC78_01070 PF00367 phosphotransferase system, EIIB LJC78_01070 PF02378 Phosphotransferase system, EIIC LJC78_01075 PF01418 Helix-turn-helix domain, rpiR family LJC78_01075 PF01380 SIS domain LJC78_01080 PF01380 SIS domain LJC78_01090 PF04463 Protein of unknown function (DUF523) LJC78_01120 PF04542 Sigma-70 region 2 LJC78_01120 PF08281 Sigma-70, region 4 LJC78_01125 PF13490 Putative zinc-finger LJC78_01130 PF02457 DisA bacterial checkpoint controller nucleotide-binding LJC78_01135 PF07949 YbbR-like protein LJC78_01140 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I LJC78_01140 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II LJC78_01140 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III LJC78_01140 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain LJC78_01145 PF01380 SIS domain LJC78_01160 PF02805 Metal binding domain of Ada LJC78_01160 PF12833 Helix-turn-helix domain LJC78_01165 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain LJC78_01165 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain LJC78_01170 PF00361 Proton-conducting membrane transporter LJC78_01170 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus LJC78_01175 PF10070 Uncharacterized protein conserved in bacteria (DUF2309) LJC78_01190 PF10057 Uncharacterized conserved protein (DUF2294) LJC78_01200 PF00672 HAMP domain LJC78_01200 PF00512 His Kinase A (phospho-acceptor) domain LJC78_01210 PF00069 Protein kinase domain LJC78_01220 PF16226 Domain of unknown function (DUF4885) LJC78_01225 PF00324 Amino acid permease LJC78_01230 PF17334 Minor curli fiber component A LJC78_01235 PF17340 Family of unknown function (DUF5370) LJC78_01240 PF00905 Penicillin binding protein transpeptidase domain LJC78_01245 PF00067 Cytochrome P450 LJC78_01255 PF13520 Amino acid permease LJC78_01260 PF03009 Glycerophosphoryl diester phosphodiesterase family LJC78_01265 PF07690 Major Facilitator Superfamily LJC78_01270 PF10852 Protein of unknown function (DUF2651) LJC78_01275 PF01047 MarR family LJC78_01275 PF00583 Acetyltransferase (GNAT) family LJC78_01290 PF08924 Domain of unknown function (DUF1906) LJC78_01290 PF01471 Putative peptidoglycan binding domain LJC78_01295 PF00892 EamA-like transporter family LJC78_01300 PF02311 AraC-like ligand binding domain LJC78_01300 PF12833 Helix-turn-helix domain LJC78_01310 PF04688 SPP1 phage holin LJC78_01315 PF05257 CHAP domain LJC78_01315 PF01476 LysM domain LJC78_01325 PF02222 ATP-grasp domain LJC78_01330 PF00089 Trypsin LJC78_01335 PF10794 Protein of unknown function (DUF2606) LJC78_01340 PF12697 Alpha/beta hydrolase family LJC78_01345 PF01066 CDP-alcohol phosphatidyltransferase LJC78_01350 PF09335 SNARE associated Golgi protein LJC78_01355 PF02666 Phosphatidylserine decarboxylase LJC78_01365 PF05139 Erythromycin esterase LJC78_01370 PF12833 Helix-turn-helix domain LJC78_01375 PF00581 Rhodanese-like domain LJC78_01375 PF12368 Rhodanase C-terminal LJC78_01375 PF17773 UPF0176 acylphosphatase like domain LJC78_01380 PF00375 Sodium:dicarboxylate symporter family LJC78_01385 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 LJC78_01385 PF00367 phosphotransferase system, EIIB LJC78_01385 PF02378 Phosphotransferase system, EIIC LJC78_01390 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase LJC78_01395 PF07702 UTRA domain LJC78_01395 PF00392 Bacterial regulatory proteins, gntR family LJC78_01400 PF07853 Protein of unknown function (DUF1648) LJC78_01405 PF01063 Amino-transferase class IV LJC78_01410 PF00324 Amino acid permease LJC78_01415 PF02574 Homocysteine S-methyltransferase LJC78_01425 PF04960 Glutaminase LJC78_01430 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LJC78_01435 PF00072 Response regulator receiver domain LJC78_01435 PF08664 YcbB domain LJC78_01440 PF00701 Dihydrodipicolinate synthetase family LJC78_01445 PF00171 Aldehyde dehydrogenase family LJC78_01450 PF07690 Major Facilitator Superfamily LJC78_01455 PF13378 Enolase C-terminal domain-like LJC78_01460 PF07729 FCD domain LJC78_01460 PF00392 Bacterial regulatory proteins, gntR family LJC78_01465 PF08666 SAF domain LJC78_01465 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus LJC78_01470 PF01636 Phosphotransferase enzyme family LJC78_01475 PF15777 Tryptophan RNA-binding attenuator protein inhibitory protein LJC78_01480 PF00892 EamA-like transporter family LJC78_01485 PF00486 Transcriptional regulatory protein, C terminal LJC78_01485 PF00072 Response regulator receiver domain LJC78_01490 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LJC78_01490 PF00512 His Kinase A (phospho-acceptor) domain LJC78_01495 PF00005 ABC transporter LJC78_01510 PF10710 Protein of unknown function (DUF2512) LJC78_01515 PF07486 Cell Wall Hydrolase LJC78_01520 PF10138 vWA found in TerF C terminus LJC78_01530 PF09423 PhoD-like phosphatase LJC78_01530 PF16655 PhoD-like phosphatase, N-terminal domain LJC78_01535 PF02416 mttA/Hcf106 family LJC78_01540 PF00902 Sec-independent protein translocase protein (TatC) LJC78_01545 PF01470 Pyroglutamyl peptidase LJC78_01550 PF00266 Aminotransferase class-V LJC78_01555 PF07690 Major Facilitator Superfamily LJC78_01560 PF00440 Bacterial regulatory proteins, tetR family LJC78_01565 PF00710 Asparaginase, N-terminal LJC78_01565 PF17763 Glutaminase/Asparaginase C-terminal domain LJC78_01570 PF01674 Lipase (class 2) LJC78_01575 PF06271 RDD family LJC78_01580 PF05225 helix-turn-helix, Psq domain LJC78_01580 PF02810 SEC-C motif LJC78_01590 PF04397 LytTr DNA-binding domain LJC78_01590 PF00072 Response regulator receiver domain LJC78_01600 PF12679 ABC-2 family transporter protein LJC78_01605 PF00248 Aldo/keto reductase family LJC78_01610 PF17118 Domain of unknown function (DUF5105) LJC78_01610 PF11611 Domain of unknown function (DUF4352) LJC78_01620 PF16244 Domain of unknown function (DUF4901) LJC78_01625 PF16244 Domain of unknown function (DUF4901) LJC78_01630 PF13539 D-alanyl-D-alanine carboxypeptidase LJC78_01645 PF00128 Alpha amylase, catalytic domain LJC78_01650 PF01297 Zinc-uptake complex component A periplasmic LJC78_01655 PF00005 ABC transporter LJC78_01660 PF00950 ABC 3 transport family LJC78_01670 PF02342 TerD domain LJC78_01675 PF02342 TerD domain LJC78_01680 PF02342 TerD domain LJC78_01685 PF03741 Integral membrane protein TerC family LJC78_01690 PF14266 Putative component of 'biosynthetic module' LJC78_01695 PF05816 Toxic anion resistance protein (TelA) LJC78_01705 PF07690 Major Facilitator Superfamily LJC78_01710 PF07690 Major Facilitator Superfamily LJC78_01720 PF00571 CBS domain LJC78_01720 PF00005 ABC transporter LJC78_01725 PF00528 Binding-protein-dependent transport system inner membrane component LJC78_01730 PF04069 Substrate binding domain of ABC-type glycine betaine transport system LJC78_01735 PF07687 Peptidase dimerisation domain LJC78_01735 PF01546 Peptidase family M20/M25/M40 LJC78_01740 PF03606 C4-dicarboxylate anaerobic carrier LJC78_01755 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain LJC78_01755 PF00056 lactate/malate dehydrogenase, NAD binding domain LJC78_01770 PF08892 YqcI/YcgG family LJC78_01785 PF02540 NAD synthase LJC78_01795 PF01202 Shikimate kinase LJC78_01805 PF08241 Methyltransferase domain LJC78_01810 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LJC78_01810 PF03466 LysR substrate binding domain LJC78_01815 PF05448 Acetyl xylan esterase (AXE1) LJC78_01820 PF10127 RNA repair pathway DNA polymerase beta family LJC78_01825 PF01619 Proline dehydrogenase LJC78_01830 PF00171 Aldehyde dehydrogenase family LJC78_01835 PF00474 Sodium:solute symporter family LJC78_01840 PF17853 GGDEF-like domain LJC78_01840 PF13556 PucR C-terminal helix-turn-helix domain LJC78_01845 PF09323 Domain of unknown function (DUF1980) LJC78_01850 PF03773 Predicted permease LJC78_01855 PF00561 alpha/beta hydrolase fold LJC78_01860 PF07992 Pyridine nucleotide-disulphide oxidoreductase LJC78_01865 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases LJC78_01870 PF00355 Rieske [2Fe-2S] domain LJC78_01875 PF04324 BFD-like [2Fe-2S] binding domain LJC78_01875 PF01077 Nitrite and sulphite reductase 4Fe-4S domain LJC78_01875 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain LJC78_01875 PF07992 Pyridine nucleotide-disulphide oxidoreductase LJC78_01875 PF18267 Rubredoxin NAD+ reductase C-terminal domain LJC78_01880 PF01568 Molydopterin dinucleotide binding domain LJC78_01880 PF04879 Molybdopterin oxidoreductase Fe4S4 domain LJC78_01880 PF00384 Molybdopterin oxidoreductase LJC78_01885 PF18267 Rubredoxin NAD+ reductase C-terminal domain LJC78_01885 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain LJC78_01885 PF07992 Pyridine nucleotide-disulphide oxidoreductase LJC78_01885 PF04324 BFD-like [2Fe-2S] binding domain LJC78_01890 PF07690 Major Facilitator Superfamily LJC78_01900 PF03734 L,D-transpeptidase catalytic domain LJC78_01915 PF00528 Binding-protein-dependent transport system inner membrane component LJC78_01920 PF00497 Bacterial extracellular solute-binding proteins, family 3 LJC78_01930 PF06271 RDD family LJC78_01935 PF10925 Protein of unknown function (DUF2680) LJC78_01940 PF01047 MarR family LJC78_01955 PF00232 Glycosyl hydrolase family 1 LJC78_01960 PF11033 Competence protein J (ComJ) LJC78_01965 PF14040 Deoxyribonuclease NucA/NucB LJC78_01975 PF01380 SIS domain LJC78_01980 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family LJC78_01985 PF01638 HxlR-like helix-turn-helix LJC78_01990 PF00550 Phosphopantetheine attachment site LJC78_01990 PF13193 AMP-binding enzyme C-terminal domain LJC78_01990 PF00668 Condensation domain LJC78_01990 PF00501 AMP-binding enzyme LJC78_02000 PF17584 Bacillus competence protein S LJC78_02010 PF00501 AMP-binding enzyme LJC78_02010 PF13193 AMP-binding enzyme C-terminal domain LJC78_02010 PF00668 Condensation domain LJC78_02010 PF00550 Phosphopantetheine attachment site LJC78_02015 PF00975 Thioesterase domain LJC78_02015 PF00550 Phosphopantetheine attachment site LJC78_02015 PF13193 AMP-binding enzyme C-terminal domain LJC78_02015 PF00668 Condensation domain LJC78_02015 PF00501 AMP-binding enzyme LJC78_02020 PF00975 Thioesterase domain LJC78_02025 PF07690 Major Facilitator Superfamily LJC78_02030 PF14317 YcxB-like protein LJC78_02035 PF00892 EamA-like transporter family LJC78_02040 PF00155 Aminotransferase class I and II LJC78_02040 PF00392 Bacterial regulatory proteins, gntR family LJC78_02045 PF01648 4'-phosphopantetheinyl transferase superfamily LJC78_02055 PF00005 ABC transporter LJC78_02060 PF00528 Binding-protein-dependent transport system inner membrane component LJC78_02065 PF00497 Bacterial extracellular solute-binding proteins, family 3 LJC78_02070 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LJC78_02070 PF03466 LysR substrate binding domain LJC78_02075 PF02441 Flavoprotein LJC78_02080 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase LJC78_02095 PF00561 alpha/beta hydrolase fold LJC78_02100 PF00854 POT family LJC78_02105 PF12708 Pectate lyase superfamily protein LJC78_02105 PF13229 Right handed beta helix region LJC78_02115 PF03323 Bacillus/Clostridium GerA spore germination protein LJC78_02120 PF05504 Spore germination B3/ GerAC like, C-terminal LJC78_02125 PF03845 Spore germination protein LJC78_02130 PF00005 ABC transporter LJC78_02135 PF02687 FtsX-like permease family LJC78_02135 PF12704 MacB-like periplasmic core domain LJC78_02140 PF00072 Response regulator receiver domain LJC78_02140 PF00486 Transcriptional regulatory protein, C terminal LJC78_02145 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LJC78_02145 PF00512 His Kinase A (phospho-acceptor) domain LJC78_02145 PF00672 HAMP domain LJC78_02150 PF18801 response regulator aspartate phosphatase H, N terminal LJC78_02155 PF11131 Rap-phr extracellular signalling LJC78_02160 PF09680 Family of unknown function LJC78_02165 PF09680 Family of unknown function LJC78_02170 PF00696 Amino acid kinase family LJC78_02170 PF13840 ACT domain LJC78_02175 PF01032 FecCD transport family LJC78_02180 PF01032 FecCD transport family LJC78_02185 PF00005 ABC transporter LJC78_02190 PF01497 Periplasmic binding protein LJC78_02200 PF07690 Major Facilitator Superfamily LJC78_02205 PF00440 Bacterial regulatory proteins, tetR family LJC78_02210 PF00881 Nitroreductase family LJC78_02215 PF03992 Antibiotic biosynthesis monooxygenase LJC78_02220 PF01022 Bacterial regulatory protein, arsR family LJC78_02225 PF00392 Bacterial regulatory proteins, gntR family LJC78_02225 PF00155 Aminotransferase class I and II LJC78_02230 PF00202 Aminotransferase class-III LJC78_02235 PF00171 Aldehyde dehydrogenase family LJC78_02240 PF06800 Sugar transport protein LJC78_02250 PF07987 Domain of unkown function (DUF1775) LJC78_02255 PF04234 CopC domain LJC78_02255 PF05425 Copper resistance protein D LJC78_02255 PF13115 YtkA-like LJC78_02260 PF08220 DeoR-like helix-turn-helix domain LJC78_02260 PF05573 NosL LJC78_02270 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit LJC78_02270 PF02378 Phosphotransferase system, EIIC LJC78_02275 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 LJC78_02280 PF08125 Mannitol dehydrogenase C-terminal domain LJC78_02280 PF01232 Mannitol dehydrogenase Rossmann domain LJC78_02285 PF00180 Isocitrate/isopropylmalate dehydrogenase LJC78_02290 PF10502 Signal peptidase, peptidase S26 LJC78_02300 PF07977 FabA-like domain LJC78_02315 PF03746 LamB/YcsF family LJC78_02320 PF01566 Natural resistance-associated macrophage protein LJC78_02325 PF07286 Protein of unknown function (DUF1445) LJC78_02330 PF02682 Carboxyltransferase domain, subdomain C and D LJC78_02335 PF02626 Carboxyltransferase domain, subdomain A and B LJC78_02340 PF09339 IclR helix-turn-helix domain LJC78_02340 PF01614 Bacterial transcriptional regulator LJC78_02345 PF13472 GDSL-like Lipase/Acylhydrolase family LJC78_02350 PF13129 Protein of unknown function (DUF3953) LJC78_02355 PF03992 Antibiotic biosynthesis monooxygenase LJC78_02360 PF05223 NTF2-like N-terminal transpeptidase domain LJC78_02360 PF03717 Penicillin-binding Protein dimerisation domain LJC78_02360 PF00905 Penicillin binding protein transpeptidase domain LJC78_02365 PF00248 Aldo/keto reductase family LJC78_02370 PF00874 PRD domain LJC78_02370 PF05043 Mga helix-turn-helix domain LJC78_02370 PF08279 HTH domain LJC78_02370 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit LJC78_02370 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 LJC78_02375 PF00501 AMP-binding enzyme LJC78_02375 PF13193 AMP-binding enzyme C-terminal domain LJC78_02380 PF13649 Methyltransferase domain LJC78_02395 PF13302 Acetyltransferase (GNAT) domain LJC78_02400 PF16242 Pyridoxamine 5'-phosphate oxidase like LJC78_02405 PF10997 Alternate to MurJ LJC78_02410 PF12823 Domain of unknown function (DUF3817) LJC78_02415 PF01037 Lrp/AsnC ligand binding domain LJC78_02420 PF01131 DNA topoisomerase LJC78_02420 PF01751 Toprim domain LJC78_02425 PF00293 NUDIX domain LJC78_02430 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain LJC78_02430 PF00205 Thiamine pyrophosphate enzyme, central domain LJC78_02430 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain LJC78_02455 PF01566 Natural resistance-associated macrophage protein LJC78_02460 PF04226 Transglycosylase associated protein LJC78_02465 PF09954 Uncharacterized protein conserved in bacteria (DUF2188) LJC78_02470 PF12787 EcsC protein family LJC78_02475 PF10685 Stress-induced bacterial acidophilic repeat motif LJC78_02475 PF00477 Small hydrophilic plant seed protein LJC78_02480 PF07883 Cupin domain LJC78_02485 PF16291 Domain of unknown function (DUF4937 LJC78_02490 PF05067 Manganese containing catalase LJC78_02495 PF03480 Bacterial extracellular solute-binding protein, family 7 LJC78_02500 PF17203 Single cache domain 3 LJC78_02500 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LJC78_02500 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain LJC78_02505 PF08279 HTH domain LJC78_02505 PF00072 Response regulator receiver domain LJC78_02510 PF00375 Sodium:dicarboxylate symporter family LJC78_02515 PF01594 AI-2E family transporter LJC78_02525 PF00005 ABC transporter LJC78_02540 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LJC78_02540 PF02770 Acyl-CoA dehydrogenase, middle domain LJC78_02540 PF08028 Acyl-CoA dehydrogenase, C-terminal domain LJC78_02545 PF13040 Fur-regulated basic protein B LJC78_02555 PF16916 Dimerisation domain of Zinc Transporter LJC78_02555 PF01545 Cation efflux family LJC78_02560 PF00085 Thioredoxin LJC78_02565 PF01820 D-ala D-ala ligase N-terminus LJC78_02565 PF07478 D-ala D-ala ligase C-terminus LJC78_02570 PF08245 Mur ligase middle domain LJC78_02570 PF02875 Mur ligase family, glutamate ligase domain LJC78_02570 PF01225 Mur ligase family, catalytic domain LJC78_02575 PF00271 Helicase conserved C-terminal domain LJC78_02575 PF00270 DEAD/DEAH box helicase LJC78_02580 PF03703 Bacterial PH domain LJC78_02585 PF03703 Bacterial PH domain LJC78_02590 PF01694 Rhomboid family LJC78_02595 PF01648 4'-phosphopantetheinyl transferase superfamily LJC78_02605 PF00842 Alanine racemase, C-terminal domain LJC78_02605 PF01168 Alanine racemase, N-terminal domain LJC78_02610 PF01402 Ribbon-helix-helix protein, copG family LJC78_02615 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system LJC78_02620 PF08678 Rsbr N terminal LJC78_02620 PF01740 STAS domain LJC78_02625 PF01740 STAS domain LJC78_02630 PF13581 Histidine kinase-like ATPase domain LJC78_02635 PF08673 Phosphoserine phosphatase RsbU, N-terminal domain LJC78_02635 PF07228 Stage II sporulation protein E (SpoIIE) LJC78_02640 PF01740 STAS domain LJC78_02645 PF13581 Histidine kinase-like ATPase domain LJC78_02650 PF04545 Sigma-70, region 4 LJC78_02650 PF04539 Sigma-70 region 3 LJC78_02650 PF04542 Sigma-70 region 2 LJC78_02655 PF07228 Stage II sporulation protein E (SpoIIE) LJC78_02670 PF01878 EVE domain LJC78_02675 PF01047 MarR family LJC78_02680 PF17674 HHH domain LJC78_02680 PF00575 S1 RNA binding domain LJC78_02680 PF09371 Tex-like protein N-terminal domain LJC78_02680 PF16921 Tex protein YqgF-like domain LJC78_02690 PF10263 SprT-like family LJC78_02690 PF17283 SprT-like zinc ribbon domain LJC78_02730 PF14659 Phage integrase, N-terminal SAM-like domain LJC78_02730 PF00589 Phage integrase family LJC78_02735 PF06114 IrrE N-terminal-like domain LJC78_02740 PF01381 Helix-turn-helix LJC78_02765 PF06125 Bacterial protein of unknown function (DUF961) LJC78_02775 PF18106 Rolling Circle replication initiation protein N-terminal domain LJC78_02775 PF02486 Replication initiation factor LJC78_02800 PF12642 Conjugative transposon protein TcpC LJC78_02810 PF12648 TcpE family LJC78_02820 PF08960 Domain of unknown function (DUF1874) LJC78_02835 PF00877 NlpC/P60 family LJC78_02845 PF14729 Domain of unknown function with cystatin-like fold (DUF4467) LJC78_02850 PF18801 response regulator aspartate phosphatase H, N terminal LJC78_02865 PF01609 Transposase DDE domain LJC78_02890 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LJC78_02890 PF03466 LysR substrate binding domain LJC78_02895 PF13302 Acetyltransferase (GNAT) domain LJC78_02905 PF14411 A nuclease of the HNH/ENDO VII superfamily with conserved LHH LJC78_02905 PF04740 LXG domain of WXG superfamily LJC78_02910 PF01381 Helix-turn-helix LJC78_02935 PF01965 DJ-1/PfpI family LJC78_02940 PF00313 'Cold-shock' DNA-binding domain LJC78_02945 PF02559 CarD-like/TRCF domain LJC78_02950 PF00892 EamA-like transporter family LJC78_02955 PF02311 AraC-like ligand binding domain LJC78_02955 PF12833 Helix-turn-helix domain LJC78_02965 PF12833 Helix-turn-helix domain LJC78_02965 PF06445 GyrI-like small molecule binding domain LJC78_02970 PF00392 Bacterial regulatory proteins, gntR family LJC78_02970 PF00155 Aminotransferase class I and II LJC78_02985 PF08818 Domain of unknown function (DU1801) LJC78_03000 PF00381 PTS HPr component phosphorylation site LJC78_03005 PF00440 Bacterial regulatory proteins, tetR family LJC78_03010 PF00892 EamA-like transporter family LJC78_03015 PF00392 Bacterial regulatory proteins, gntR family LJC78_03015 PF00155 Aminotransferase class I and II LJC78_03020 PF01575 MaoC like domain LJC78_03025 PF06821 Serine hydrolase LJC78_03035 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 LJC78_03035 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) LJC78_03040 PF01022 Bacterial regulatory protein, arsR family LJC78_03045 PF02040 Arsenical pump membrane protein LJC78_03055 PF12746 GNAT acetyltransferase LJC78_03060 PF00892 EamA-like transporter family LJC78_03065 PF00155 Aminotransferase class I and II LJC78_03065 PF00392 Bacterial regulatory proteins, gntR family LJC78_03070 PF00282 Pyridoxal-dependent decarboxylase conserved domain LJC78_03075 PF01613 Flavin reductase like domain LJC78_03085 PF02627 Carboxymuconolactone decarboxylase family LJC78_03100 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LJC78_03100 PF07730 Histidine kinase LJC78_03105 PF00196 Bacterial regulatory proteins, luxR family LJC78_03105 PF00072 Response regulator receiver domain LJC78_03110 PF03176 MMPL family LJC78_03115 PF12697 Alpha/beta hydrolase family LJC78_03120 PF04474 Protein of unknown function (DUF554) LJC78_03125 PF06445 GyrI-like small molecule binding domain LJC78_03125 PF13411 MerR HTH family regulatory protein LJC78_03130 PF01545 Cation efflux family LJC78_03130 PF16916 Dimerisation domain of Zinc Transporter LJC78_03135 PF00881 Nitroreductase family LJC78_03140 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily LJC78_03145 PF07681 DoxX LJC78_03150 PF00085 Thioredoxin LJC78_03160 PF10676 Spore germination protein gerPA/gerPF LJC78_03170 PF10676 Spore germination protein gerPA/gerPF LJC78_03180 PF04239 Protein of unknown function (DUF421) LJC78_03185 PF00011 Hsp20/alpha crystallin family LJC78_03190 PF10676 Spore germination protein gerPA/gerPF LJC78_03195 PF10676 Spore germination protein gerPA/gerPF LJC78_03200 PF00440 Bacterial regulatory proteins, tetR family LJC78_03205 PF13564 DoxX-like family LJC78_03210 PF00583 Acetyltransferase (GNAT) family LJC78_03215 PF00005 ABC transporter LJC78_03215 PF12848 ABC transporter LJC78_03220 PF00324 Amino acid permease LJC78_03225 PF05163 DinB family LJC78_03230 PF01047 MarR family LJC78_03235 PF03176 MMPL family LJC78_03240 PF00881 Nitroreductase family LJC78_03245 PF01047 MarR family LJC78_03250 PF07690 Major Facilitator Superfamily LJC78_03255 PF01925 Sulfite exporter TauE/SafE LJC78_03260 PF00392 Bacterial regulatory proteins, gntR family LJC78_03260 PF07729 FCD domain LJC78_03265 PF00704 Glycosyl hydrolases family 18 LJC78_03265 PF01476 LysM domain LJC78_03270 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase LJC78_03275 PF11611 Domain of unknown function (DUF4352) LJC78_03275 PF08139 Prokaryotic membrane lipoprotein lipid attachment site LJC78_03280 PF00245 Alkaline phosphatase LJC78_03285 PF08818 Domain of unknown function (DU1801) LJC78_03290 PF16302 Domain of unknown function (DUF4944) LJC78_03295 PF00583 Acetyltransferase (GNAT) family LJC78_03300 PF01966 HD domain LJC78_03305 PF07563 Protein of unknown function (DUF1541) LJC78_03310 PF07690 Major Facilitator Superfamily LJC78_03315 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit LJC78_03330 PF00232 Glycosyl hydrolase family 1 LJC78_03335 PF00392 Bacterial regulatory proteins, gntR family LJC78_03335 PF07702 UTRA domain LJC78_03340 PF00480 ROK family LJC78_03350 PF02156 Glycosyl hydrolase family 26 LJC78_03395 PF00586 AIR synthase related protein, N-terminal domain LJC78_03395 PF02769 AIR synthase related protein, C-terminal domain LJC78_03400 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE LJC78_03405 PF00814 Glycoprotease family LJC78_03410 PF00583 Acetyltransferase (GNAT) family LJC78_03415 PF00814 Glycoprotease family LJC78_03420 PF00005 ABC transporter LJC78_03420 PF16326 ABC transporter C-terminal domain LJC78_03420 PF12848 ABC transporter LJC78_03425 PF01967 MoaC family LJC78_03430 PF06971 Putative DNA-binding protein N-terminus LJC78_03430 PF02629 CoA binding domain LJC78_03435 PF02416 mttA/Hcf106 family LJC78_03440 PF00902 Sec-independent protein translocase protein (TatC) LJC78_03445 PF14146 Domain of unknown function (DUF4305) LJC78_03450 PF02517 CPBP intramembrane metalloprotease LJC78_03455 PF00166 Chaperonin 10 Kd subunit LJC78_03460 PF00118 TCP-1/cpn60 chaperonin family LJC78_03475 PF00931 NB-ARC domain LJC78_03475 PF13176 Tetratricopeptide repeat LJC78_03480 PF08240 Alcohol dehydrogenase GroES-like domain LJC78_03480 PF00107 Zinc-binding dehydrogenase LJC78_03490 PF00294 pfkB family carbohydrate kinase LJC78_03500 PF08271 TFIIB zinc-binding LJC78_03505 PF04536 TPM domain LJC78_03510 PF13421 SPFH domain-Band 7 family LJC78_03515 PF07885 Ion channel LJC78_03520 PF00083 Sugar (and other) transporter LJC78_03525 PF00107 Zinc-binding dehydrogenase LJC78_03525 PF08240 Alcohol dehydrogenase GroES-like domain LJC78_03530 PF03330 Lytic transglycolase LJC78_03535 PF07676 WD40-like Beta Propeller Repeat LJC78_03550 PF14169 Cold-inducible protein YdjO LJC78_03555 PF12697 Alpha/beta hydrolase family LJC78_03565 PF00394 Multicopper oxidase LJC78_03565 PF07731 Multicopper oxidase LJC78_03565 PF07732 Multicopper oxidase LJC78_03570 PF00324 Amino acid permease LJC78_03580 PF16916 Dimerisation domain of Zinc Transporter LJC78_03580 PF01545 Cation efflux family LJC78_03585 PF07726 ATPase family associated with various cellular activities (AAA) LJC78_03585 PF17863 AAA lid domain LJC78_03590 PF01882 Protein of unknown function DUF58 LJC78_03595 PF11992 Domain of unknown function (DUF3488) LJC78_03595 PF13559 Domain of unknown function (DUF4129) LJC78_03595 PF01841 Transglutaminase-like superfamily LJC78_03600 PF00117 Glutamine amidotransferase class-I LJC78_03600 PF00958 GMP synthase C terminal domain LJC78_03600 PF02540 NAD synthase LJC78_03610 PF00860 Permease family LJC78_03620 PF13076 Fur-regulated basic protein A LJC78_03625 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) LJC78_03630 PF14044 NETI protein LJC78_03635 PF00731 AIR carboxylase LJC78_03640 PF02222 ATP-grasp domain LJC78_03640 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain LJC78_03645 PF10397 Adenylosuccinate lyase C-terminus LJC78_03645 PF00206 Lyase LJC78_03650 PF01259 SAICAR synthetase LJC78_03655 PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase LJC78_03665 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain LJC78_03665 PF02769 AIR synthase related protein, C-terminal domain LJC78_03665 PF00586 AIR synthase related protein, N-terminal domain LJC78_03670 PF00156 Phosphoribosyl transferase domain LJC78_03675 PF02769 AIR synthase related protein, C-terminal domain LJC78_03675 PF00586 AIR synthase related protein, N-terminal domain LJC78_03680 PF00551 Formyl transferase LJC78_03685 PF01808 AICARFT/IMPCHase bienzyme LJC78_03685 PF02142 MGS-like domain LJC78_03690 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain LJC78_03690 PF02844 Phosphoribosylglycinamide synthetase, N domain LJC78_03690 PF02843 Phosphoribosylglycinamide synthetase, C domain LJC78_03695 PF01037 Lrp/AsnC ligand binding domain LJC78_03700 PF13520 Amino acid permease LJC78_03710 PF13382 Adenine deaminase C-terminal domain LJC78_03710 PF01979 Amidohydrolase family LJC78_03715 PF11258 Protein of unknown function (DUF3048) N-terminal domain LJC78_03715 PF17479 Protein of unknown function (DUF3048) C-terminal domain LJC78_03720 PF01371 Trp repressor protein LJC78_03725 PF01645 Conserved region in glutamate synthase LJC78_03730 PF01884 PcrB family LJC78_03735 PF00580 UvrD/REP helicase N-terminal domain LJC78_03735 PF13361 UvrD-like helicase C-terminal domain LJC78_03740 PF01653 NAD-dependent DNA ligase adenylation domain LJC78_03740 PF03120 NAD-dependent DNA ligase OB-fold domain LJC78_03740 PF03119 NAD-dependent DNA ligase C4 zinc finger domain LJC78_03740 PF12826 Helix-hairpin-helix motif LJC78_03740 PF00533 BRCA1 C Terminus (BRCT) domain LJC78_03745 PF07537 CamS sex pheromone cAM373 precursor LJC78_03755 PF01636 Phosphotransferase enzyme family LJC78_03760 PF02308 MgtC family LJC78_03765 PF00474 Sodium:solute symporter family LJC78_03770 PF02686 Glu-tRNAGln amidotransferase C subunit LJC78_03775 PF01425 Amidase LJC78_03780 PF02934 GatB/GatE catalytic domain LJC78_03780 PF02637 GatB domain LJC78_03790 PF00873 AcrB/AcrD/AcrF family LJC78_03795 PF00781 Diacylglycerol kinase catalytic domain LJC78_03800 PF01938 TRAM domain LJC78_03800 PF05958 tRNA (Uracil-5-)-methyltransferase LJC78_03805 PF13408 Recombinase zinc beta ribbon domain LJC78_03805 PF07508 Recombinase LJC78_03825 PF04634 Protein of unknown function, DUF600 LJC78_03830 PF04740 LXG domain of WXG superfamily LJC78_03840 PF18801 response regulator aspartate phosphatase H, N terminal LJC78_03840 PF13176 Tetratricopeptide repeat LJC78_03850 PF01709 Transcriptional regulator LJC78_03860 PF00440 Bacterial regulatory proteins, tetR family LJC78_03865 PF11007 Spore coat associated protein JA (CotJA) LJC78_03870 PF12652 CotJB protein LJC78_03875 PF05067 Manganese containing catalase LJC78_03880 PF00583 Acetyltransferase (GNAT) family LJC78_03890 PF04854 Protein of unknown function, DUF624 LJC78_03895 PF02743 Cache domain LJC78_03895 PF06580 Histidine kinase LJC78_03895 PF00672 HAMP domain LJC78_03895 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LJC78_03905 PF13416 Bacterial extracellular solute-binding protein LJC78_03910 PF00528 Binding-protein-dependent transport system inner membrane component LJC78_03915 PF00528 Binding-protein-dependent transport system inner membrane component LJC78_03920 PF07470 Glycosyl Hydrolase Family 88 LJC78_03925 PF12833 Helix-turn-helix domain LJC78_03930 PF13472 GDSL-like Lipase/Acylhydrolase family LJC78_03935 PF09224 Domain of unknown function (DUF1961) LJC78_03940 PF04854 Protein of unknown function, DUF624 LJC78_03945 PF18370 Rhamnogalacturonan I lyases beta-sheet domain LJC78_03950 PF01839 FG-GAP repeat LJC78_03950 PF18370 Rhamnogalacturonan I lyases beta-sheet domain LJC78_03955 PF00657 GDSL-like Lipase/Acylhydrolase LJC78_03970 PF01547 Bacterial extracellular solute-binding protein LJC78_03975 PF00528 Binding-protein-dependent transport system inner membrane component LJC78_03980 PF00528 Binding-protein-dependent transport system inner membrane component LJC78_03985 PF02056 Family 4 glycosyl hydrolase LJC78_03985 PF11975 Family 4 glycosyl hydrolase C-terminal domain LJC78_03990 PF04239 Protein of unknown function (DUF421) LJC78_03995 PF03992 Antibiotic biosynthesis monooxygenase LJC78_04000 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily LJC78_04010 PF01740 STAS domain LJC78_04015 PF10055 Uncharacterized small protein (DUF2292) LJC78_04020 PF01027 Inhibitor of apoptosis-promoting Bax1 LJC78_04035 PF00872 Transposase, Mutator family LJC78_04040 PF13037 Domain of unknown function (DUF3898) LJC78_04040 PF13039 Protein of unknown function (DUF3900) LJC78_04045 PF00667 FAD binding domain LJC78_04045 PF00258 Flavodoxin LJC78_04045 PF00175 Oxidoreductase NAD-binding domain LJC78_04045 PF00067 Cytochrome P450 LJC78_04050 PF00884 Sulfatase LJC78_04055 PF00483 Nucleotidyl transferase LJC78_04060 PF16363 GDP-mannose 4,6 dehydratase LJC78_04065 PF03407 Nucleotide-diphospho-sugar transferase LJC78_04070 PF00535 Glycosyl transferase family 2 LJC78_04075 PF03407 Nucleotide-diphospho-sugar transferase LJC78_04080 PF07690 Major Facilitator Superfamily LJC78_04085 PF13419 Haloacid dehalogenase-like hydrolase LJC78_04090 PF13520 Amino acid permease LJC78_04095 PF00171 Aldehyde dehydrogenase family LJC78_04100 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LJC78_04105 PF16326 ABC transporter C-terminal domain LJC78_04105 PF12848 ABC transporter LJC78_04105 PF00005 ABC transporter LJC78_04110 PF10787 Uncharacterised protein from bacillus cereus group LJC78_04115 PF13411 MerR HTH family regulatory protein LJC78_04120 PF07690 Major Facilitator Superfamily LJC78_04140 PF12848 ABC transporter LJC78_04140 PF00005 ABC transporter LJC78_04145 PF00270 DEAD/DEAH box helicase LJC78_04145 PF00271 Helicase conserved C-terminal domain LJC78_04155 PF00544 Pectate lyase LJC78_04160 PF00939 Sodium:sulfate symporter transmembrane region LJC78_04165 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LJC78_04165 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain LJC78_04170 PF08279 HTH domain LJC78_04170 PF00072 Response regulator receiver domain LJC78_04170 PF12431 Transcriptional regulator LJC78_04175 PF03401 Tripartite tricarboxylate transporter family receptor LJC78_04180 PF03600 Citrate transporter LJC78_04185 PF00753 Metallo-beta-lactamase superfamily LJC78_04190 PF02898 Nitric oxide synthase, oxygenase domain LJC78_04195 PF00708 Acylphosphatase LJC78_04200 PF03475 3-alpha domain LJC78_04200 PF03473 MOSC domain LJC78_04205 PF11121 Protein of unknown function (DUF2639) LJC78_04215 PF11588 Protein of unknown function (DUF3243) LJC78_04220 PF00557 Metallopeptidase family M24 LJC78_04225 PF00367 phosphotransferase system, EIIB LJC78_04225 PF02378 Phosphotransferase system, EIIC LJC78_04230 PF00884 Sulfatase LJC78_04240 PF09350 Domain of unknown function (DUF1992) LJC78_04245 PF01235 Sodium:alanine symporter family LJC78_04265 PF00367 phosphotransferase system, EIIB LJC78_04265 PF02378 Phosphotransferase system, EIIC LJC78_04270 PF00128 Alpha amylase, catalytic domain LJC78_04270 PF16657 Maltogenic Amylase, C-terminal domain LJC78_04275 PF00392 Bacterial regulatory proteins, gntR family LJC78_04275 PF07702 UTRA domain LJC78_04280 PF00881 Nitroreductase family LJC78_04285 PF02872 5'-nucleotidase, C-terminal domain LJC78_04285 PF00149 Calcineurin-like phosphoesterase LJC78_04290 PF01965 DJ-1/PfpI family LJC78_04300 PF07690 Major Facilitator Superfamily LJC78_04305 PF06569 Protein of unknown function (DUF1128) LJC78_04310 PF01451 Low molecular weight phosphotyrosine protein phosphatase LJC78_04320 PF03631 Virulence factor BrkB LJC78_04325 PF07690 Major Facilitator Superfamily LJC78_04330 PF01699 Sodium/calcium exchanger protein LJC78_04335 PF14167 YfkD-like protein LJC78_04340 PF00924 Mechanosensitive ion channel LJC78_04345 PF04055 Radical SAM superfamily LJC78_04345 PF08756 YfkB-like domain LJC78_04355 PF01522 Polysaccharide deacetylase LJC78_04360 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase LJC78_04360 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase LJC78_04365 PF01544 CorA-like Mg2+ transporter protein LJC78_04370 PF00730 HhH-GPD superfamily base excision DNA repair protein LJC78_04375 PF05958 tRNA (Uracil-5-)-methyltransferase LJC78_04375 PF01938 TRAM domain LJC78_04380 PF14118 YfzA-like protein LJC78_04385 PF01207 Dihydrouridine synthase (Dus) LJC78_04400 PF00676 Dehydrogenase E1 component LJC78_04405 PF02780 Transketolase, C-terminal domain LJC78_04405 PF02779 Transketolase, pyrimidine binding domain LJC78_04410 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) LJC78_04410 PF00364 Biotin-requiring enzyme LJC78_04410 PF02817 e3 binding domain LJC78_04415 PF07992 Pyridine nucleotide-disulphide oxidoreductase LJC78_04415 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain LJC78_04420 PF01590 GAF domain LJC78_04420 PF00158 Sigma-54 interaction domain LJC78_04420 PF02954 Bacterial regulatory protein, Fis family LJC78_04425 PF08141 Small acid-soluble spore protein H family LJC78_04430 PF02694 Uncharacterised BCR, YnfA/UPF0060 family LJC78_04435 PF17353 Family of unknown function (DUF5381) LJC78_04440 PF17353 Family of unknown function (DUF5381) LJC78_04455 PF06013 Proteins of 100 residues with WXG LJC78_04460 PF02056 Family 4 glycosyl hydrolase LJC78_04460 PF11975 Family 4 glycosyl hydrolase C-terminal domain LJC78_04465 PF01418 Helix-turn-helix domain, rpiR family LJC78_04465 PF01380 SIS domain LJC78_04470 PF02378 Phosphotransferase system, EIIC LJC78_04470 PF00367 phosphotransferase system, EIIB LJC78_04475 PF12708 Pectate lyase superfamily protein LJC78_04475 PF11962 Peptidase_G2, IMC autoproteolytic cleavage domain LJC78_04480 PF00664 ABC transporter transmembrane region LJC78_04480 PF00005 ABC transporter LJC78_04485 PF00664 ABC transporter transmembrane region LJC78_04485 PF00005 ABC transporter LJC78_04490 PF07681 DoxX LJC78_04495 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily LJC78_04500 PF02311 AraC-like ligand binding domain LJC78_04500 PF12833 Helix-turn-helix domain LJC78_04505 PF00083 Sugar (and other) transporter LJC78_04510 PF01261 Xylose isomerase-like TIM barrel LJC78_04520 PF07730 Histidine kinase LJC78_04525 PF00196 Bacterial regulatory proteins, luxR family LJC78_04525 PF00072 Response regulator receiver domain LJC78_04530 PF00005 ABC transporter LJC78_04545 PF03551 Transcriptional regulator PadR-like family LJC78_04545 PF10400 Virulence activator alpha C-term LJC78_04550 PF01674 Lipase (class 2) LJC78_04555 PF01757 Acyltransferase family LJC78_04560 PF00440 Bacterial regulatory proteins, tetR family LJC78_04560 PF17922 Tetracyclin repressor-like, C-terminal domain LJC78_04565 PF07690 Major Facilitator Superfamily LJC78_04570 PF12867 DinB superfamily LJC78_04580 PF01047 MarR family LJC78_04585 PF09924 Uncharacterised conserved protein (DUF2156) LJC78_04585 PF03706 Lysylphosphatidylglycerol synthase TM region LJC78_04590 PF01497 Periplasmic binding protein LJC78_04595 PF01032 FecCD transport family LJC78_04600 PF01032 FecCD transport family LJC78_04605 PF02567 Phenazine biosynthesis-like protein LJC78_04610 PF00881 Nitroreductase family LJC78_04615 PF14151 YfhD-like protein LJC78_04620 PF14152 YfhE-like protein LJC78_04625 PF01370 NAD dependent epimerase/dehydratase family LJC78_04625 PF08338 Domain of unknown function (DUF1731) LJC78_04630 PF02631 RecX family LJC78_04635 PF08838 Protein of unknown function (DUF1811) LJC78_04640 PF07690 Major Facilitator Superfamily LJC78_04645 PF08176 Small acid-soluble spore protein K family LJC78_04650 PF14043 WVELL protein LJC78_04655 PF08239 Bacterial SH3 domain LJC78_04660 PF13630 SdpI/YhfL protein family LJC78_04665 PF00561 alpha/beta hydrolase fold LJC78_04670 PF00535 Glycosyl transferase family 2 LJC78_04675 PF09586 Bacterial membrane protein YfhO LJC78_04680 PF04307 LexA-binding, inner membrane-associated putative hydrolase LJC78_04685 PF00730 HhH-GPD superfamily base excision DNA repair protein LJC78_04685 PF14815 NUDIX domain LJC78_04700 PF04259 Small, acid-soluble spore protein, gamma-type LJC78_04705 PF14182 YgaB-like protein LJC78_04710 PF04167 Protein of unknown function (DUF402) LJC78_04715 PF00664 ABC transporter transmembrane region LJC78_04715 PF00005 ABC transporter LJC78_04720 PF06081 Aromatic acid exporter family member 1 LJC78_04725 PF00202 Aminotransferase class-III LJC78_04730 PF00578 AhpC/TSA family LJC78_04735 PF01475 Ferric uptake regulator family LJC78_04740 PF11023 Zinc-ribbon containing domain LJC78_04745 PF18576 Helix-turn-helix domain LJC78_04745 PF14540 Nucleotidyltransferase-like LJC78_04845 PF07070 SpoOM protein LJC78_04855 PF07875 Coat F domain LJC78_04860 PF03575 Peptidase family S51 LJC78_04865 PF13667 ThiC-associated domain LJC78_04865 PF01964 Radical SAM ThiC family LJC78_04875 PF13040 Fur-regulated basic protein B LJC78_04880 PF00199 Catalase LJC78_04880 PF06628 Catalase-related immune-responsive LJC78_04885 PF00005 ABC transporter LJC78_04890 PF09084 NMT1/THI5 like LJC78_04895 PF00528 Binding-protein-dependent transport system inner membrane component LJC78_04900 PF00296 Luciferase-like monooxygenase LJC78_04910 PF00253 Ribosomal protein S14p/S29e LJC78_04920 PF01381 Helix-turn-helix LJC78_04935 PF08331 Domain of unknown function (DUF1730) LJC78_04940 PF12671 Putative amidase domain LJC78_04945 PF00588 SpoU rRNA Methylase family LJC78_04950 PF13171 Protein of unknown function (DUF4004) LJC78_04955 PF04519 Polymer-forming cytoskeletal LJC78_04965 PF08298 PrkA AAA domain LJC78_04965 PF06798 PrkA serine protein kinase C-terminal domain LJC78_04970 PF04285 Protein of unknown function (DUF444) LJC78_04975 PF01047 MarR family LJC78_04985 PF07690 Major Facilitator Superfamily LJC78_04990 PF03358 NADPH-dependent FMN reductase LJC78_05010 PF00392 Bacterial regulatory proteins, gntR family LJC78_05015 PF00005 ABC transporter LJC78_05020 PF00005 ABC transporter LJC78_05025 PF12679 ABC-2 family transporter protein LJC78_05030 PF00313 'Cold-shock' DNA-binding domain LJC78_05035 PF03180 NLPA lipoprotein LJC78_05040 PF07694 5TMR of 5TMR-LYT LJC78_05040 PF00990 Diguanylate cyclase, GGDEF domain LJC78_05045 PF00375 Sodium:dicarboxylate symporter family LJC78_05050 PF14410 HNH/ENDO VII superfamily nuclease with conserved GHE residues LJC78_05050 PF14449 Pre-toxin TG LJC78_05050 PF04740 LXG domain of WXG superfamily LJC78_05075 PF00589 Phage integrase family LJC78_05075 PF14659 Phage integrase, N-terminal SAM-like domain LJC78_05115 PF12642 Conjugative transposon protein TcpC LJC78_05125 PF12648 TcpE family LJC78_05135 PF08960 Domain of unknown function (DUF1874) LJC78_05145 PF00877 NlpC/P60 family LJC78_05155 PF14729 Domain of unknown function with cystatin-like fold (DUF4467) LJC78_05165 PF18801 response regulator aspartate phosphatase H, N terminal LJC78_05175 PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) LJC78_05185 PF02872 5'-nucleotidase, C-terminal domain LJC78_05185 PF00565 Staphylococcal nuclease homologue LJC78_05185 PF00149 Calcineurin-like phosphoesterase LJC78_05185 PF00746 LPXTG cell wall anchor motif LJC78_05190 PF04203 Sortase domain LJC78_05195 PF01479 S4 domain LJC78_05195 PF00849 RNA pseudouridylate synthase LJC78_05200 PF17326 Family of unknown function (DUF5365) LJC78_05205 PF00571 CBS domain LJC78_05210 PF13419 Haloacid dehalogenase-like hydrolase LJC78_05215 PF00795 Carbon-nitrogen hydrolase LJC78_05215 PF00583 Acetyltransferase (GNAT) family LJC78_05220 PF00202 Aminotransferase class-III LJC78_05225 PF04309 Glycerol-3-phosphate responsive antiterminator LJC78_05230 PF00230 Major intrinsic protein LJC78_05235 PF02782 FGGY family of carbohydrate kinases, C-terminal domain LJC78_05235 PF00370 FGGY family of carbohydrate kinases, N-terminal domain LJC78_05240 PF01266 FAD dependent oxidoreductase LJC78_05240 PF16901 C-terminal domain of alpha-glycerophosphate oxidase LJC78_05245 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II LJC78_05245 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I LJC78_05245 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III LJC78_05245 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain LJC78_05250 PF07730 Histidine kinase LJC78_05250 PF13185 GAF domain LJC78_05255 PF00072 Response regulator receiver domain LJC78_05255 PF00196 Bacterial regulatory proteins, luxR family LJC78_05260 PF03358 NADPH-dependent FMN reductase LJC78_05265 PF14148 YhdB-like protein LJC78_05270 PF13028 Protein of unknown function (DUF3889) LJC78_05275 PF01476 LysM domain LJC78_05275 PF00877 NlpC/P60 family LJC78_05280 PF02082 Transcriptional regulator LJC78_05285 PF05552 Conserved TM helix LJC78_05290 PF04293 SpoVR like protein LJC78_05295 PF00245 Alkaline phosphatase LJC78_05300 PF01476 LysM domain LJC78_05300 PF00877 NlpC/P60 family LJC78_05305 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LJC78_05305 PF03466 LysR substrate binding domain LJC78_05310 PF00285 Citrate synthase, C-terminal domain LJC78_05320 PF13520 Amino acid permease LJC78_05325 PF00209 Sodium:neurotransmitter symporter family LJC78_05330 PF00155 Aminotransferase class I and II LJC78_05330 PF00392 Bacterial regulatory proteins, gntR family LJC78_05335 PF00583 Acetyltransferase (GNAT) family LJC78_05340 PF17453 Sigma-M inhibitor LJC78_05345 PF13800 Sigma factor regulator N-terminal LJC78_05345 PF13791 Sigma factor regulator C-terminal LJC78_05350 PF08281 Sigma-70, region 4 LJC78_05350 PF04542 Sigma-70 region 2 LJC78_05355 PF00248 Aldo/keto reductase family LJC78_05360 PF01553 Acyltransferase LJC78_05365 PF01595 Cyclin M transmembrane N-terminal domain LJC78_05365 PF03471 Transporter associated domain LJC78_05365 PF00571 CBS domain LJC78_05370 PF13411 MerR HTH family regulatory protein LJC78_05380 PF03471 Transporter associated domain LJC78_05380 PF00571 CBS domain LJC78_05380 PF01595 Cyclin M transmembrane N-terminal domain LJC78_05385 PF02537 CrcB-like protein, Camphor Resistance (CrcB) LJC78_05390 PF02537 CrcB-like protein, Camphor Resistance (CrcB) LJC78_05395 PF03009 Glycerophosphoryl diester phosphodiesterase family LJC78_05400 PF17444 Uncharacterized YhdX-like LJC78_05405 PF00924 Mechanosensitive ion channel LJC78_05410 PF02146 Sir2 family LJC78_05415 PF01522 Polysaccharide deacetylase LJC78_05420 PF01063 Amino-transferase class IV LJC78_05425 PF03553 Na+/H+ antiporter family LJC78_05430 PF00582 Universal stress protein family LJC78_05440 PF00664 ABC transporter transmembrane region LJC78_05440 PF00005 ABC transporter LJC78_05445 PF00664 ABC transporter transmembrane region LJC78_05445 PF00005 ABC transporter LJC78_05450 PF13460 NAD(P)H-binding LJC78_05460 PF00269 Small, acid-soluble spore proteins, alpha/beta type LJC78_05470 PF17277 Family of unknown function (DUF5342) LJC78_05475 PF14398 YheC/D like ATP-grasp LJC78_05480 PF14398 YheC/D like ATP-grasp LJC78_05485 PF04286 Protein of unknown function (DUF445) LJC78_05490 PF06133 Control of competence regulator ComK, YlbF/YmcA LJC78_05505 PF04055 Radical SAM superfamily LJC78_05510 PF00999 Sodium/hydrogen exchanger family LJC78_05515 PF02080 TrkA-C domain LJC78_05525 PF00378 Enoyl-CoA hydratase/isomerase LJC78_05530 PF14120 YhzD-like protein LJC78_05535 PF00005 ABC transporter LJC78_05535 PF13732 Domain of unknown function (DUF4162) LJC78_05545 PF00149 Calcineurin-like phosphoesterase LJC78_05550 PF13514 AAA domain LJC78_05555 PF01966 HD domain LJC78_05560 PF14147 Sporulation protein YhaL LJC78_05570 PF09680 Family of unknown function LJC78_05575 PF09680 Family of unknown function LJC78_05585 PF11667 Putative zincin peptidase LJC78_05590 PF08963 Protein of unknown function (DUF1878) LJC78_05595 PF01047 MarR family LJC78_05600 PF12732 YtxH-like protein LJC78_05610 PF17099 Tryptophan transporter TrpP LJC78_05615 PF00266 Aminotransferase class-V LJC78_05620 PF01230 HIT domain LJC78_05625 PF00005 ABC transporter LJC78_05630 PF05975 Bacterial ABC transporter protein EcsB LJC78_05635 PF12787 EcsC protein family LJC78_05640 PF07687 Peptidase dimerisation domain LJC78_05640 PF01546 Peptidase family M20/M25/M40 LJC78_05655 PF03992 Antibiotic biosynthesis monooxygenase LJC78_05660 PF00912 Transglycosylase LJC78_05660 PF00905 Penicillin binding protein transpeptidase domain LJC78_05665 PF01208 Uroporphyrinogen decarboxylase (URO-D) LJC78_05670 PF00762 Ferrochelatase LJC78_05675 PF01593 Flavin containing amine oxidoreductase LJC78_05680 PF17932 Tetracyclin repressor-like, C-terminal domain LJC78_05680 PF00440 Bacterial regulatory proteins, tetR family LJC78_05690 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III LJC78_05690 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal LJC78_05695 PF10086 YhfC intramembrane metalloprotease LJC78_05705 PF05343 M42 glutamyl aminopeptidase LJC78_05710 PF04266 ASCH domain LJC78_05715 PF00375 Sodium:dicarboxylate symporter family LJC78_05720 PF14149 YhfH-like protein LJC78_05725 PF12706 Beta-lactamase superfamily domain LJC78_05730 PF03099 Biotin/lipoate A/B protein ligase family LJC78_05730 PF10437 Bacterial lipoate protein ligase C-terminus LJC78_05735 PF13460 NAD(P)H-binding LJC78_05740 PF13193 AMP-binding enzyme C-terminal domain LJC78_05740 PF00501 AMP-binding enzyme LJC78_05750 PF16491 CAAX prenyl protease N-terminal, five membrane helices LJC78_05750 PF01435 Peptidase family M48 LJC78_05755 PF05922 Peptidase inhibitor I9 LJC78_05755 PF00082 Subtilase family LJC78_05760 PF00583 Acetyltransferase (GNAT) family LJC78_05765 PF08240 Alcohol dehydrogenase GroES-like domain LJC78_05765 PF00107 Zinc-binding dehydrogenase LJC78_05770 PF01497 Periplasmic binding protein LJC78_05775 PF00300 Histidine phosphatase superfamily (branch 1) LJC78_05780 PF02803 Thiolase, C-terminal domain LJC78_05780 PF00108 Thiolase, N-terminal domain LJC78_05785 PF00501 AMP-binding enzyme LJC78_05785 PF13193 AMP-binding enzyme C-terminal domain LJC78_05790 PF02632 BioY family LJC78_05795 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LJC78_05810 PF08858 IDEAL domain LJC78_05815 PF06338 ComK protein LJC78_05825 PF05901 Excalibur calcium-binding domain LJC78_05830 PF00474 Sodium:solute symporter family LJC78_05835 PF11755 Protein of unknown function (DUF3311) LJC78_05845 PF09335 SNARE associated Golgi protein LJC78_05850 PF10502 Signal peptidase, peptidase S26 LJC78_05855 PF01494 FAD binding domain LJC78_05860 PF01047 MarR family LJC78_05870 PF07690 Major Facilitator Superfamily LJC78_05875 PF01408 Oxidoreductase family, NAD-binding Rossmann fold LJC78_05875 PF02894 Oxidoreductase family, C-terminal alpha/beta domain LJC78_05880 PF05116 Sucrose-6F-phosphate phosphohydrolase LJC78_05885 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family LJC78_05890 PF00356 Bacterial regulatory proteins, lacI family LJC78_05895 PF05145 Transition state regulatory protein AbrB LJC78_05900 PF07690 Major Facilitator Superfamily LJC78_05905 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LJC78_05905 PF12793 Sugar transport-related sRNA regulator N-term LJC78_05920 PF03860 Domain of Unknown Function (DUF326) LJC78_05925 PF02915 Rubrerythrin LJC78_05930 PF13361 UvrD-like helicase C-terminal domain LJC78_05930 PF12705 PD-(D/E)XK nuclease superfamily LJC78_05935 PF00580 UvrD/REP helicase N-terminal domain LJC78_05935 PF12705 PD-(D/E)XK nuclease superfamily LJC78_05935 PF13361 UvrD-like helicase C-terminal domain LJC78_05940 PF12320 Type 5 capsule protein repressor C-terminal domain LJC78_05940 PF00149 Calcineurin-like phosphoesterase LJC78_05945 PF13476 AAA domain LJC78_05955 PF10676 Spore germination protein gerPA/gerPF LJC78_05960 PF10970 Spore germination protein GerPE LJC78_05970 PF10737 Spore germination protein GerPC LJC78_05975 PF10803 Spore germination GerPB LJC78_05980 PF10676 Spore germination protein gerPA/gerPF LJC78_05985 PF09388 Spo0E like sporulation regulatory protein LJC78_05990 PF08757 CotH kinase protein LJC78_05995 PF01557 Fumarylacetoacetate (FAA) hydrolase family LJC78_06000 PF07457 Protein of unknown function (DUF1516) LJC78_06005 PF17936 Bacterial Ig domain LJC78_06005 PF00082 Subtilase family LJC78_06010 PF10949 Protein of unknown function (DUF2777) LJC78_06015 PF13537 Glutamine amidotransferase domain LJC78_06015 PF00733 Asparagine synthase LJC78_06025 PF01554 MatE LJC78_06030 PF02311 AraC-like ligand binding domain LJC78_06030 PF12833 Helix-turn-helix domain LJC78_06035 PF00356 Bacterial regulatory proteins, lacI family LJC78_06040 PF02894 Oxidoreductase family, C-terminal alpha/beta domain LJC78_06040 PF01408 Oxidoreductase family, NAD-binding Rossmann fold LJC78_06045 PF05163 DinB family LJC78_06050 PF01810 LysE type translocator LJC78_06055 PF00392 Bacterial regulatory proteins, gntR family LJC78_06055 PF00155 Aminotransferase class I and II LJC78_06060 PF13599 Pentapeptide repeats (9 copies) LJC78_06065 PF00561 alpha/beta hydrolase fold LJC78_06065 PF08386 TAP-like protein LJC78_06075 PF13673 Acetyltransferase (GNAT) domain LJC78_06080 PF02219 Methylenetetrahydrofolate reductase LJC78_06080 PF02574 Homocysteine S-methyltransferase LJC78_06085 PF04461 Protein of unknown function (DUF520) LJC78_06095 PF12650 Domain of unknown function (DUF3784) LJC78_06100 PF02645 Uncharacterised protein, DegV family COG1307 LJC78_06105 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) LJC78_06105 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 LJC78_06110 PF12690 Intracellular proteinase inhibitor LJC78_06115 PF12758 Protein of unknown function (DUF3813) LJC78_06130 PF00326 Prolyl oligopeptidase family LJC78_06135 PF01883 Iron-sulfur cluster assembly protein LJC78_06145 PF01565 FAD binding domain LJC78_06155 PF01118 Semialdehyde dehydrogenase, NAD binding domain LJC78_06155 PF02774 Semialdehyde dehydrogenase, dimerisation domain LJC78_06160 PF01960 ArgJ family LJC78_06165 PF00696 Amino acid kinase family LJC78_06170 PF00202 Aminotransferase class-III LJC78_06175 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain LJC78_06175 PF00117 Glutamine amidotransferase class-I LJC78_06180 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain LJC78_06180 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain LJC78_06185 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain LJC78_06185 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain LJC78_06195 PF14168 YjzC-like protein LJC78_06200 PF11151 Protein of unknown function (DUF2929) LJC78_06215 PF02608 ABC transporter substrate-binding protein PnrA-like LJC78_06220 PF10815 ComZ LJC78_06230 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III LJC78_06230 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal LJC78_06235 PF00109 Beta-ketoacyl synthase, N-terminal domain LJC78_06235 PF02801 Beta-ketoacyl synthase, C-terminal domain LJC78_06240 PF10026 Predicted Zn-dependent protease (DUF2268) LJC78_06245 PF00005 ABC transporter LJC78_06245 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LJC78_06250 PF00005 ABC transporter LJC78_06250 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LJC78_06255 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LJC78_06260 PF00528 Binding-protein-dependent transport system inner membrane component LJC78_06265 PF12911 N-terminal TM domain of oligopeptide transport permease C LJC78_06265 PF00528 Binding-protein-dependent transport system inner membrane component LJC78_06270 PF12227 Protein of unknown function (DUF3603) LJC78_06275 PF00579 tRNA synthetases class I (W and Y) LJC78_06280 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LJC78_06285 PF00528 Binding-protein-dependent transport system inner membrane component LJC78_06290 PF12911 N-terminal TM domain of oligopeptide transport permease C LJC78_06290 PF00528 Binding-protein-dependent transport system inner membrane component LJC78_06295 PF00005 ABC transporter LJC78_06295 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LJC78_06300 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LJC78_06300 PF00005 ABC transporter LJC78_06305 PF07690 Major Facilitator Superfamily LJC78_06310 PF13508 Acetyltransferase (GNAT) domain LJC78_06315 PF03960 ArsC family LJC78_06320 PF03741 Integral membrane protein TerC family LJC78_06330 PF05389 Negative regulator of genetic competence (MecA) LJC78_06340 PF06054 Competence protein CoiA-like family LJC78_06345 PF01432 Peptidase family M3 LJC78_06345 PF08439 Oligopeptidase F LJC78_06360 PF01152 Bacterial-like globin LJC78_06365 PF01464 Transglycosylase SLT domain LJC78_06370 PF01928 CYTH domain LJC78_06380 PF04607 Region found in RelA / SpoT proteins LJC78_06385 PF01513 ATP-NAD kinase LJC78_06390 PF00849 RNA pseudouridylate synthase LJC78_06395 PF00149 Calcineurin-like phosphoesterase LJC78_06400 PF00999 Sodium/hydrogen exchanger family LJC78_06400 PF02080 TrkA-C domain LJC78_06400 PF02254 TrkA-N domain LJC78_06405 PF03070 TENA/THI-4/PQQC family LJC78_06410 PF02581 Thiamine monophosphate synthase LJC78_06415 PF01266 FAD dependent oxidoreductase LJC78_06420 PF02597 ThiS family LJC78_06425 PF05690 Thiazole biosynthesis protein ThiG LJC78_06430 PF00899 ThiF family LJC78_06435 PF08543 Phosphomethylpyrimidine kinase LJC78_06445 PF14153 Spore coat protein CotO LJC78_06450 PF10612 Spore coat protein Z LJC78_06455 PF10612 Spore coat protein Z LJC78_06460 PF07552 Spore Coat Protein X and V domain LJC78_06475 PF07098 Protein of unknown function (DUF1360) LJC78_06490 PF14069 Stage VI sporulation protein F LJC78_06495 PF00580 UvrD/REP helicase N-terminal domain LJC78_06495 PF13361 UvrD-like helicase C-terminal domain LJC78_06505 PF13673 Acetyltransferase (GNAT) domain LJC78_06515 PF00756 Putative esterase LJC78_06520 PF01053 Cys/Met metabolism PLP-dependent enzyme LJC78_06525 PF01053 Cys/Met metabolism PLP-dependent enzyme LJC78_06530 PF13302 Acetyltransferase (GNAT) domain LJC78_06535 PF05684 Protein of unknown function (DUF819) LJC78_06575 PF01381 Helix-turn-helix LJC78_06615 PF00534 Glycosyl transferases group 1 LJC78_06660 PF18801 response regulator aspartate phosphatase H, N terminal LJC78_06665 PF14411 A nuclease of the HNH/ENDO VII superfamily with conserved LHH LJC78_06665 PF04740 LXG domain of WXG superfamily LJC78_06675 PF00872 Transposase, Mutator family LJC78_06685 PF17247 Family of unknown function (DUF5316) LJC78_06740 PF03992 Antibiotic biosynthesis monooxygenase LJC78_06750 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 LJC78_06750 PF08279 HTH domain LJC78_06750 PF05043 Mga helix-turn-helix domain LJC78_06750 PF00874 PRD domain LJC78_06755 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit LJC78_06755 PF02378 Phosphotransferase system, EIIC LJC78_06755 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 LJC78_06760 PF01238 Phosphomannose isomerase type I LJC78_06765 PF11208 Protein of unknown function (DUF2992) LJC78_06775 PF13302 Acetyltransferase (GNAT) domain LJC78_06785 PF04073 Aminoacyl-tRNA editing domain LJC78_06790 PF13783 Domain of unknown function (DUF4177) LJC78_06795 PF14154 Domain of unknown function (DUF4306) LJC78_06800 PF01040 UbiA prenyltransferase family LJC78_06810 PF01522 Polysaccharide deacetylase LJC78_06810 PF13739 Deacetylase PdaC LJC78_06810 PF11738 Protein of unknown function (DUF3298) LJC78_06815 PF10901 Protein of unknown function (DUF2690) LJC78_06820 PF14070 Putative motility protein LJC78_06825 PF10026 Predicted Zn-dependent protease (DUF2268) LJC78_06830 PF10990 Protein of unknown function (DUF2809) LJC78_06835 PF14172 Domain of unknown function (DUF4309) LJC78_06845 PF07849 Protein of unknown function (DUF1641) LJC78_06850 PF11611 Domain of unknown function (DUF4352) LJC78_06855 PF00293 NUDIX domain LJC78_06865 PF00067 Cytochrome P450 LJC78_06870 PF04101 Glycosyltransferase family 28 C-terminal domain LJC78_06880 PF02602 Uroporphyrinogen-III synthase HemD LJC78_06885 PF03649 Uncharacterised protein family (UPF0014) LJC78_06890 PF00005 ABC transporter LJC78_06895 PF13536 Putative multidrug resistance efflux transporter LJC78_06905 PF07849 Protein of unknown function (DUF1641) LJC78_06910 PF07992 Pyridine nucleotide-disulphide oxidoreductase LJC78_06915 PF02614 Glucuronate isomerase LJC78_06925 PF02615 Malate/L-lactate dehydrogenase LJC78_06930 PF00107 Zinc-binding dehydrogenase LJC78_06930 PF08240 Alcohol dehydrogenase GroES-like domain LJC78_06935 PF03786 D-mannonate dehydratase (UxuA) LJC78_06940 PF00106 short chain dehydrogenase LJC78_06945 PF07690 Major Facilitator Superfamily LJC78_06950 PF00356 Bacterial regulatory proteins, lacI family LJC78_06955 PF08125 Mannitol dehydrogenase C-terminal domain LJC78_06955 PF01232 Mannitol dehydrogenase Rossmann domain LJC78_06960 PF08666 SAF domain LJC78_06960 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus LJC78_06965 PF01925 Sulfite exporter TauE/SafE LJC78_06970 PF05163 DinB family LJC78_06990 PF18801 response regulator aspartate phosphatase H, N terminal LJC78_07005 PF01510 N-acetylmuramoyl-L-alanine amidase LJC78_07005 PF01476 LysM domain LJC78_07005 PF01471 Putative peptidoglycan binding domain LJC78_07010 PF08000 Bacterial PH domain LJC78_07015 PF05908 Poly-gamma-glutamate hydrolase LJC78_07020 PF05067 Manganese containing catalase LJC78_07025 PF06114 IrrE N-terminal-like domain LJC78_07030 PF01381 Helix-turn-helix LJC78_07045 PF01695 IstB-like ATP binding protein LJC78_07060 PF17356 Phage-like element PBSX protein XtrA LJC78_07065 PF08281 Sigma-70, region 4 LJC78_07070 PF10668 Phage terminase small subunit LJC78_07070 PF03592 Terminase small subunit LJC78_07075 PF17288 Terminase RNAseH like domain LJC78_07075 PF04466 Phage terminase large subunit LJC78_07080 PF04860 Phage portal protein LJC78_07085 PF14550 Putative phage serine protease XkdF LJC78_07090 PF05065 Phage capsid family LJC78_07095 PF11436 Protein of unknown function (DUF3199) LJC78_07100 PF12206 Domain of unknown function (DUF3599) LJC78_07105 PF04883 Bacteriophage HK97-gp10, putative tail-component LJC78_07120 PF04984 Phage tail sheath protein subtilisin-like domain LJC78_07120 PF17481 Phage tail sheath protein beta-sandwich domain LJC78_07120 PF17482 Phage tail sheath C-terminal domain LJC78_07125 PF09393 Phage tail tube protein LJC78_07130 PF08890 Phage XkdN-like tail assembly chaperone protein, TAC LJC78_07140 PF01464 Transglycosylase SLT domain LJC78_07140 PF01464 Transglycosylase SLT domain LJC78_07140 PF01464 Transglycosylase SLT domain LJC78_07145 PF01476 LysM domain LJC78_07155 PF10844 Protein of unknown function (DUF2577) LJC78_07160 PF10934 Protein of unknown function (DUF2634) LJC78_07165 PF04865 Baseplate J-like protein LJC78_07170 PF10076 Uncharacterised protein conserved in bacteria (DUF2313) LJC78_07185 PF09636 XkdW protein LJC78_07190 PF09693 Phage uncharacterised protein (Phage_XkdX) LJC78_07200 PF10779 Haemolysin XhlA LJC78_07205 PF04688 SPP1 phage holin LJC78_07210 PF01476 LysM domain LJC78_07210 PF01471 Putative peptidoglycan binding domain LJC78_07210 PF01510 N-acetylmuramoyl-L-alanine amidase LJC78_07220 PF14185 Antitoxin SpoIISB, type II toxin-antitoxin system LJC78_07225 PF14171 Toxin SpoIISA, type II toxin-antitoxin system LJC78_07230 PF01384 Phosphate transporter family LJC78_07235 PF01865 Protein of unknown function DUF47 LJC78_07240 PF13520 Amino acid permease LJC78_07245 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily LJC78_07255 PF13231 Dolichyl-phosphate-mannose-protein mannosyltransferase LJC78_07260 PF00535 Glycosyl transferase family 2 LJC78_07270 PF13180 PDZ domain LJC78_07275 PF03807 NADP oxidoreductase coenzyme F420-dependent LJC78_07275 PF14748 Pyrroline-5-carboxylate reductase dimerisation LJC78_07280 PF04951 D-aminopeptidase LJC78_07285 PF00528 Binding-protein-dependent transport system inner membrane component LJC78_07290 PF12911 N-terminal TM domain of oligopeptide transport permease C LJC78_07290 PF00528 Binding-protein-dependent transport system inner membrane component LJC78_07295 PF00005 ABC transporter LJC78_07295 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LJC78_07300 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LJC78_07305 PF02016 LD-carboxypeptidase N-terminal domain LJC78_07305 PF17676 LD-carboxypeptidase C-terminal domain LJC78_07310 PF13378 Enolase C-terminal domain-like LJC78_07310 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain LJC78_07315 PF00877 NlpC/P60 family LJC78_07320 PF00005 ABC transporter LJC78_07320 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LJC78_07325 PF10282 Lactonase, 7-bladed beta-propeller LJC78_07335 PF03061 Thioesterase superfamily LJC78_07340 PF00970 Oxidoreductase FAD-binding domain LJC78_07340 PF00042 Globin LJC78_07340 PF00175 Oxidoreductase NAD-binding domain LJC78_07350 PF04239 Protein of unknown function (DUF421) LJC78_07355 PF12867 DinB superfamily LJC78_07360 PF13302 Acetyltransferase (GNAT) domain LJC78_07365 PF00893 Small Multidrug Resistance protein LJC78_07370 PF00893 Small Multidrug Resistance protein LJC78_07375 PF00551 Formyl transferase LJC78_07375 PF01842 ACT domain LJC78_07380 PF01472 PUA domain LJC78_07380 PF00696 Amino acid kinase family LJC78_07385 PF00171 Aldehyde dehydrogenase family LJC78_07390 PF02566 OsmC-like protein LJC78_07395 PF01047 MarR family LJC78_07400 PF02566 OsmC-like protein LJC78_07410 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region LJC78_07415 PF01717 Cobalamin-independent synthase, Catalytic domain LJC78_07415 PF08267 Cobalamin-independent synthase, N-terminal domain LJC78_07420 PF00082 Subtilase family LJC78_07425 PF01740 STAS domain LJC78_07430 PF02361 Cobalt transport protein LJC78_07435 PF00005 ABC transporter LJC78_07440 PF09819 ABC-type cobalt transport system, permease component LJC78_07445 PF07615 YKOF-related Family LJC78_07450 PF00072 Response regulator receiver domain LJC78_07450 PF00486 Transcriptional regulatory protein, C terminal LJC78_07455 PF00672 HAMP domain LJC78_07455 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LJC78_07455 PF00512 His Kinase A (phospho-acceptor) domain LJC78_07460 PF03413 Peptidase propeptide and YPEB domain LJC78_07465 PF03413 Peptidase propeptide and YPEB domain LJC78_07470 PF11132 Transcriptional regulator protein (SplA) LJC78_07475 PF03448 MgtE intracellular N domain LJC78_07475 PF01769 Divalent cation transporter LJC78_07475 PF00571 CBS domain LJC78_07480 PF13411 MerR HTH family regulatory protein LJC78_07495 PF01047 MarR family LJC78_07500 PF06925 Monogalactosyldiacylglycerol (MGDG) synthase LJC78_07510 PF00149 Calcineurin-like phosphoesterase LJC78_07520 PF00535 Glycosyl transferase family 2 LJC78_07525 PF01068 ATP dependent DNA ligase domain LJC78_07530 PF02735 Ku70/Ku80 beta-barrel domain LJC78_07535 PF00563 EAL domain LJC78_07535 PF00990 Diguanylate cyclase, GGDEF domain LJC78_07535 PF03707 Bacterial signalling protein N terminal repeat LJC78_07540 PF09335 SNARE associated Golgi protein LJC78_07545 PF03741 Integral membrane protein TerC family LJC78_07550 PF04542 Sigma-70 region 2 LJC78_07555 PF12791 Anti-sigma factor N-terminus LJC78_07560 PF00269 Small, acid-soluble spore proteins, alpha/beta type LJC78_07565 PF08876 Domain of unknown function (DUF1836) LJC78_07570 PF01435 Peptidase family M48 LJC78_07575 PF02386 Cation transport protein LJC78_07600 PF01757 Acyltransferase family LJC78_07605 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LJC78_07605 PF00512 His Kinase A (phospho-acceptor) domain LJC78_07605 PF00989 PAS fold LJC78_07605 PF13188 PAS domain LJC78_07605 PF13426 PAS domain LJC78_07610 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain LJC78_07610 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain LJC78_07620 PF01008 Initiation factor 2 subunit family LJC78_07625 PF01636 Phosphotransferase enzyme family LJC78_07630 PF00795 Carbon-nitrogen hydrolase LJC78_07635 PF00155 Aminotransferase class I and II LJC78_07640 PF00016 Ribulose bisphosphate carboxylase large chain, catalytic domain LJC78_07640 PF02788 Ribulose bisphosphate carboxylase large chain, N-terminal domain LJC78_07650 PF00596 Class II Aldolase and Adducin N-terminal domain LJC78_07655 PF03079 ARD/ARD' family LJC78_07660 PF06803 Protein of unknown function (DUF1232) LJC78_07665 PF09388 Spo0E like sporulation regulatory protein LJC78_07675 PF02743 Cache domain LJC78_07675 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LJC78_07675 PF00512 His Kinase A (phospho-acceptor) domain LJC78_07680 PF01047 MarR family LJC78_07685 PF00691 OmpA family LJC78_07685 PF13677 Membrane MotB of proton-channel complex MotA/MotB LJC78_07690 PF01618 MotA/TolQ/ExbB proton channel family LJC78_07695 PF00004 ATPase family associated with various cellular activities (AAA) LJC78_07695 PF17871 AAA lid domain LJC78_07695 PF10431 C-terminal, D2-small domain, of ClpB protein LJC78_07695 PF07724 AAA domain (Cdc48 subfamily) LJC78_07705 PF06508 Queuosine biosynthesis protein QueC LJC78_07710 PF01242 6-pyruvoyl tetrahydropterin synthase LJC78_07715 PF04055 Radical SAM superfamily LJC78_07720 PF14489 QueF-like protein LJC78_07725 PF11514 Protein of unknown function (DUF3219) LJC78_07730 PF09953 Uncharacterized protein conserved in bacteria (DUF2187) LJC78_07740 PF07486 Cell Wall Hydrolase LJC78_07745 PF01943 Polysaccharide biosynthesis protein LJC78_07750 PF00578 AhpC/TSA family LJC78_07765 PF01321 Creatinase/Prolidase N-terminal domain LJC78_07765 PF00557 Metallopeptidase family M24 LJC78_07770 PF00356 Bacterial regulatory proteins, lacI family LJC78_07770 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family LJC78_07775 PF03123 CAT RNA binding domain LJC78_07775 PF00874 PRD domain LJC78_07780 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 LJC78_07780 PF00367 phosphotransferase system, EIIB LJC78_07780 PF02378 Phosphotransferase system, EIIC LJC78_07785 PF00381 PTS HPr component phosphorylation site LJC78_07790 PF05524 PEP-utilising enzyme, N-terminal LJC78_07790 PF00391 PEP-utilising enzyme, mobile domain LJC78_07790 PF02896 PEP-utilising enzyme, TIM barrel domain LJC78_07795 PF11132 Transcriptional regulator protein (SplA) LJC78_07805 PF00583 Acetyltransferase (GNAT) family LJC78_07810 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LJC78_07810 PF00672 HAMP domain LJC78_07810 PF02743 Cache domain LJC78_07815 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase LJC78_07815 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase LJC78_07825 PF00872 Transposase, Mutator family LJC78_07835 PF03717 Penicillin-binding Protein dimerisation domain LJC78_07835 PF00905 Penicillin binding protein transpeptidase domain LJC78_07840 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LJC78_07840 PF00512 His Kinase A (phospho-acceptor) domain LJC78_07840 PF00989 PAS fold LJC78_07840 PF08447 PAS fold LJC78_07845 PF00155 Aminotransferase class I and II LJC78_07855 PF01584 CheW-like domain LJC78_07855 PF00072 Response regulator receiver domain LJC78_07860 PF14177 YkyB-like protein LJC78_07865 PF07690 Major Facilitator Superfamily LJC78_07870 PF01476 LysM domain LJC78_07870 PF03734 L,D-transpeptidase catalytic domain LJC78_07875 PF00149 Calcineurin-like phosphoesterase LJC78_07875 PF10518 TAT (twin-arginine translocation) pathway signal sequence LJC78_07885 PF00563 EAL domain LJC78_07885 PF10388 EAL-domain associated signalling protein domain LJC78_07890 PF08796 Protein of unknown function (DUF1797) LJC78_07895 PF04308 Ribonuclease H-like LJC78_07900 PF14156 Antirepressor AbbA LJC78_07910 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LJC78_07910 PF03466 LysR substrate binding domain LJC78_07915 PF00258 Flavodoxin LJC78_07925 PF00258 Flavodoxin LJC78_07930 PF08503 Tetrahydrodipicolinate succinyltransferase N-terminal LJC78_07930 PF14602 Hexapeptide repeat of succinyl-transferase LJC78_07930 PF00132 Bacterial transferase hexapeptide (six repeats) LJC78_07935 PF01546 Peptidase family M20/M25/M40 LJC78_07935 PF07687 Peptidase dimerisation domain LJC78_07940 PF03698 Uncharacterised protein family (UPF0180) LJC78_07945 PF00924 Mechanosensitive ion channel LJC78_07950 PF00578 AhpC/TSA family LJC78_07950 PF10417 C-terminal domain of 1-Cys peroxiredoxin LJC78_07955 PF00578 AhpC/TSA family LJC78_07975 PF12804 MobA-like NTP transferase domain LJC78_07980 PF00899 ThiF family LJC78_07985 PF00994 Probable molybdopterin binding domain LJC78_07985 PF03454 MoeA C-terminal region (domain IV) LJC78_07985 PF03453 MoeA N-terminal region (domain I and II) LJC78_07990 PF03205 Molybdopterin guanine dinucleotide synthesis protein B LJC78_07995 PF02391 MoaE protein LJC78_08000 PF02597 ThiS family LJC78_08010 PF00664 ABC transporter transmembrane region LJC78_08010 PF00005 ABC transporter LJC78_08015 PF04893 Yip1 domain LJC78_08020 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion LJC78_08025 PF00005 ABC transporter LJC78_08030 PF02687 FtsX-like permease family LJC78_08030 PF12704 MacB-like periplasmic core domain LJC78_08035 PF00455 DeoR C terminal sensor domain LJC78_08035 PF08220 DeoR-like helix-turn-helix domain LJC78_08040 PF00294 pfkB family carbohydrate kinase LJC78_08045 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 LJC78_08045 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit LJC78_08050 PF10502 Signal peptidase, peptidase S26 LJC78_08060 PF00005 ABC transporter LJC78_08060 PF12848 ABC transporter LJC78_08065 PF02558 Ketopantoate reductase PanE/ApbA LJC78_08065 PF08546 Ketopantoate reductase PanE/ApbA C terminal LJC78_08070 PF02073 Thermophilic metalloprotease (M29) LJC78_08075 PF17447 Uncharacterized YkpC-like LJC78_08085 PF18277 AbrB C-terminal domain LJC78_08085 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin LJC78_08090 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LJC78_08090 PF00512 His Kinase A (phospho-acceptor) domain LJC78_08090 PF00989 PAS fold LJC78_08095 PF06094 Gamma-glutamyl cyclotransferase, AIG2-like LJC78_08100 PF02254 TrkA-N domain LJC78_08100 PF02080 TrkA-C domain LJC78_08105 PF01979 Amidohydrolase family LJC78_08105 PF13382 Adenine deaminase C-terminal domain LJC78_08110 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain LJC78_08110 PF17770 Ribonuclease J C-terminal domain LJC78_08110 PF00753 Metallo-beta-lactamase superfamily LJC78_08115 PF07288 Protein of unknown function (DUF1447) LJC78_08125 PF01327 Polypeptide deformylase LJC78_08140 PF00676 Dehydrogenase E1 component LJC78_08145 PF02779 Transketolase, pyrimidine binding domain LJC78_08145 PF02780 Transketolase, C-terminal domain LJC78_08150 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) LJC78_08150 PF00364 Biotin-requiring enzyme LJC78_08150 PF02817 e3 binding domain LJC78_08155 PF07992 Pyridine nucleotide-disulphide oxidoreductase LJC78_08155 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain LJC78_08165 PF13790 SR1 protein LJC78_08170 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain LJC78_08170 PF01276 Orn/Lys/Arg decarboxylase, major domain LJC78_08175 PF05256 Uncharacterised protein family (UPF0223) LJC78_08180 PF06335 Protein of unknown function (DUF1054) LJC78_08190 PF00459 Inositol monophosphatase family LJC78_08195 PF00583 Acetyltransferase (GNAT) family LJC78_08200 PF01609 Transposase DDE domain LJC78_08205 PF04072 Leucine carboxyl methyltransferase LJC78_08210 PF07504 Fungalysin/Thermolysin Propeptide Motif LJC78_08210 PF03413 Peptidase propeptide and YPEB domain LJC78_08210 PF01447 Thermolysin metallopeptidase, catalytic domain LJC78_08210 PF02868 Thermolysin metallopeptidase, alpha-helical domain LJC78_08230 PF13490 Putative zinc-finger LJC78_08240 PF17259 Family of unknown function (DUF5325) LJC78_08245 PF03144 Elongation factor Tu domain 2 LJC78_08245 PF00009 Elongation factor Tu GTP binding domain LJC78_08245 PF00679 Elongation factor G C-terminus LJC78_08245 PF14492 Elongation Factor G, domain II LJC78_08250 PF14036 YlaH-like protein LJC78_08255 PF09963 Uncharacterized protein conserved in bacteria (DUF2197) LJC78_08260 PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) LJC78_08265 PF02562 PhoH-like protein LJC78_08265 PF13638 PIN domain LJC78_08275 PF04960 Glutaminase LJC78_08280 PF07408 Protein of unknown function (DUF1507) LJC78_08285 PF01098 Cell cycle protein LJC78_08290 PF02785 Biotin carboxylase C-terminal domain LJC78_08290 PF00289 Biotin carboxylase, N-terminal domain LJC78_08290 PF00364 Biotin-requiring enzyme LJC78_08290 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain LJC78_08290 PF00682 HMGL-like LJC78_08290 PF02436 Conserved carboxylase domain LJC78_08295 PF02628 Cytochrome oxidase assembly protein LJC78_08300 PF01040 UbiA prenyltransferase family LJC78_08305 PF00034 Cytochrome c LJC78_08305 PF00116 Cytochrome C oxidase subunit II, periplasmic domain LJC78_08305 PF02790 Cytochrome C oxidase subunit II, transmembrane domain LJC78_08310 PF00115 Cytochrome C and Quinol oxidase polypeptide I LJC78_08315 PF00510 Cytochrome c oxidase subunit III LJC78_08320 PF03626 Prokaryotic Cytochrome C oxidase subunit IV LJC78_08325 PF09678 Cytochrome c oxidase caa3 assembly factor (Caa3_CtaG) LJC78_08330 PF08868 YugN-like family LJC78_08335 PF00571 CBS domain LJC78_08340 PF14504 CAP-associated N-terminal LJC78_08340 PF00188 Cysteine-rich secretory protein family LJC78_08345 PF14071 Putative coat protein LJC78_08350 PF14003 YlbE-like protein LJC78_08355 PF06133 Control of competence regulator ComK, YlbF/YmcA LJC78_08360 PF09902 Uncharacterized protein conserved in bacteria (DUF2129) LJC78_08370 PF01467 Cytidylyltransferase-like LJC78_08375 PF07670 Nucleoside recognition LJC78_08380 PF01734 Patatin-like phospholipase LJC78_08385 PF05362 Lon protease (S16) C-terminal proteolytic domain LJC78_08385 PF13180 PDZ domain LJC78_08390 PF05636 HIGH Nucleotidyl Transferase LJC78_08400 PF02620 Large ribosomal RNA subunit accumulation protein YceD LJC78_08405 PF01783 Ribosomal L32p protein family LJC78_08415 PF00583 Acetyltransferase (GNAT) family LJC78_08420 PF02558 Ketopantoate reductase PanE/ApbA LJC78_08420 PF08546 Ketopantoate reductase PanE/ApbA C terminal LJC78_08425 PF10079 Bacillithiol biosynthesis BshC LJC78_08430 PF02381 MraZ protein, putative antitoxin-like LJC78_08435 PF01795 MraW methylase family LJC78_08445 PF03717 Penicillin-binding Protein dimerisation domain LJC78_08445 PF00905 Penicillin binding protein transpeptidase domain LJC78_08445 PF03793 PASTA domain LJC78_08450 PF03793 PASTA domain LJC78_08450 PF03717 Penicillin-binding Protein dimerisation domain LJC78_08450 PF00905 Penicillin binding protein transpeptidase domain LJC78_08455 PF02875 Mur ligase family, glutamate ligase domain LJC78_08455 PF01225 Mur ligase family, catalytic domain LJC78_08455 PF08245 Mur ligase middle domain LJC78_08460 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 LJC78_08460 PF00953 Glycosyl transferase family 4 LJC78_08465 PF02875 Mur ligase family, glutamate ligase domain LJC78_08465 PF08245 Mur ligase middle domain LJC78_08470 PF01098 Cell cycle protein LJC78_08475 PF04101 Glycosyltransferase family 28 C-terminal domain LJC78_08475 PF03033 Glycosyltransferase family 28 N-terminal domain LJC78_08480 PF01565 FAD binding domain LJC78_08480 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain LJC78_08485 PF08478 POTRA domain, FtsQ-type LJC78_08490 PF05949 Bacterial protein of unknown function (DUF881) LJC78_08495 PF05949 Bacterial protein of unknown function (DUF881) LJC78_08500 PF06947 Protein of unknown function (DUF1290) LJC78_08505 PF02491 SHS2 domain inserted in FTSA LJC78_08510 PF12327 FtsZ family, C-terminal domain LJC78_08510 PF00091 Tubulin/FtsZ family, GTPase domain LJC78_08515 PF05922 Peptidase inhibitor I9 LJC78_08515 PF00082 Subtilase family LJC78_08520 PF03419 Sporulation factor SpoIIGA LJC78_08525 PF04542 Sigma-70 region 2 LJC78_08525 PF04545 Sigma-70, region 4 LJC78_08530 PF04542 Sigma-70 region 2 LJC78_08530 PF04539 Sigma-70 region 3 LJC78_08530 PF04545 Sigma-70, region 4 LJC78_08535 PF00005 ABC transporter LJC78_08540 PF01546 Peptidase family M20/M25/M40 LJC78_08540 PF07687 Peptidase dimerisation domain LJC78_08545 PF05239 PRC-barrel domain LJC78_08550 PF02578 Multi-copper polyphenol oxidoreductase laccase LJC78_08555 PF01168 Alanine racemase, N-terminal domain LJC78_08560 PF04472 Cell division protein SepF LJC78_08565 PF02325 YGGT family LJC78_08570 PF01479 S4 domain LJC78_08570 PF17774 Putative RNA-binding domain in YlmH LJC78_08575 PF05103 DivIVA protein LJC78_08580 PF00133 tRNA synthetases class I (I, L, M and V) LJC78_08580 PF08264 Anticodon-binding domain of tRNA LJC78_08585 PF01258 Prokaryotic dksA/traR C4-type zinc finger LJC78_08590 PF01252 Signal peptidase (SPase) II LJC78_08595 PF00849 RNA pseudouridylate synthase LJC78_08595 PF01479 S4 domain LJC78_08600 PF00156 Phosphoribosyl transferase domain LJC78_08605 PF00860 Permease family LJC78_08610 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain LJC78_08610 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain LJC78_08615 PF01979 Amidohydrolase family LJC78_08620 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain LJC78_08620 PF00117 Glutamine amidotransferase class-I LJC78_08625 PF02142 MGS-like domain LJC78_08625 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain LJC78_08625 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain LJC78_08630 PF00175 Oxidoreductase NAD-binding domain LJC78_08630 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B LJC78_08635 PF01180 Dihydroorotate dehydrogenase LJC78_08640 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family LJC78_08645 PF00156 Phosphoribosyl transferase domain LJC78_08650 PF01507 Phosphoadenosine phosphosulfate reductase family LJC78_08655 PF01384 Phosphate transporter family LJC78_08660 PF01747 ATP-sulfurylase LJC78_08660 PF14306 PUA-like domain LJC78_08670 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases LJC78_08675 PF01903 CbiX LJC78_08685 PF05670 NFACT protein RNA binding domain LJC78_08690 PF00689 Cation transporting ATPase, C-terminus LJC78_08690 PF00690 Cation transporter/ATPase, N-terminus LJC78_08695 PF08340 Domain of unknown function (DUF1732) LJC78_08695 PF03755 YicC-like family, N-terminal region LJC78_08700 PF04025 Domain of unknown function (DUF370) LJC78_08705 PF00625 Guanylate kinase LJC78_08710 PF01192 RNA polymerase Rpb6 LJC78_08715 PF04127 DNA / pantothenate metabolism flavoprotein LJC78_08715 PF02441 Flavoprotein LJC78_08720 PF00271 Helicase conserved C-terminal domain LJC78_08720 PF18074 Primosomal protein N C-terminal domain LJC78_08720 PF18319 PriA DNA helicase Cys-rich region (CRR) domain LJC78_08720 PF17764 3′ DNA-binding domain (3′BD) LJC78_08720 PF04851 Type III restriction enzyme, res subunit LJC78_08725 PF01327 Polypeptide deformylase LJC78_08730 PF02911 Formyl transferase, C-terminal domain LJC78_08730 PF00551 Formyl transferase LJC78_08735 PF01189 16S rRNA methyltransferase RsmB/F LJC78_08735 PF01029 NusB family LJC78_08740 PF04055 Radical SAM superfamily LJC78_08750 PF03793 PASTA domain LJC78_08750 PF00069 Protein kinase domain LJC78_08755 PF16745 RsgA N-terminal domain LJC78_08755 PF03193 RsgA GTPase LJC78_08760 PF00834 Ribulose-phosphate 3 epimerase family LJC78_08765 PF04265 Thiamin pyrophosphokinase, vitamin B1 binding domain LJC78_08765 PF04263 Thiamin pyrophosphokinase, catalytic domain LJC78_08770 PF08183 Stage V sporulation protein family LJC78_08775 PF00830 Ribosomal L28 family LJC78_08780 PF03780 Asp23 family, cell envelope-related function LJC78_08785 PF13684 Dihydroxyacetone kinase family LJC78_08785 PF02734 DAK2 domain LJC78_08790 PF01842 ACT domain LJC78_08790 PF03315 Serine dehydratase beta chain LJC78_08795 PF03313 Serine dehydratase alpha chain LJC78_08800 PF00270 DEAD/DEAH box helicase LJC78_08800 PF00271 Helicase conserved C-terminal domain LJC78_08800 PF17191 RecG wedge domain LJC78_08805 PF03061 Thioesterase superfamily LJC78_08810 PF02504 Fatty acid synthesis protein LJC78_08815 PF00698 Acyl transferase domain LJC78_08825 PF00550 Phosphopantetheine attachment site LJC78_08830 PF00035 Double-stranded RNA binding motif LJC78_08830 PF14622 Ribonuclease-III-like LJC78_08835 PF02463 RecF/RecN/SMC N terminal domain LJC78_08835 PF06470 SMC proteins Flexible Hinge Domain LJC78_08840 PF00448 SRP54-type protein, GTPase domain LJC78_08840 PF02881 SRP54-type protein, helical bundle domain LJC78_08845 PF02369 Bacterial Ig-like domain (group 1) LJC78_08850 PF04297 Putative helix-turn-helix protein, YlxM / p13 like LJC78_08855 PF00448 SRP54-type protein, GTPase domain LJC78_08855 PF02881 SRP54-type protein, helical bundle domain LJC78_08855 PF02978 Signal peptide binding domain LJC78_08860 PF00886 Ribosomal protein S16 LJC78_08870 PF11068 YlqD protein LJC78_08875 PF05239 PRC-barrel domain LJC78_08875 PF01782 RimM N-terminal domain LJC78_08880 PF01746 tRNA (Guanine-1)-methyltransferase LJC78_08885 PF01245 Ribosomal protein L19 LJC78_08890 PF01926 50S ribosome-binding GTPase LJC78_08895 PF01351 Ribonuclease HII LJC78_08905 PF01312 FlhB HrpN YscU SpaS Family LJC78_08910 PF08442 ATP-grasp domain LJC78_08910 PF00549 CoA-ligase LJC78_08915 PF02629 CoA binding domain LJC78_08915 PF00549 CoA-ligase LJC78_08920 PF02481 DNA recombination-mediator protein A LJC78_08925 PF01131 DNA topoisomerase LJC78_08925 PF01751 Toprim domain LJC78_08925 PF01396 Topoisomerase DNA binding C4 zinc finger LJC78_08930 PF01134 Glucose inhibited division protein A LJC78_08935 PF02899 Phage integrase, N-terminal SAM-like domain LJC78_08935 PF00589 Phage integrase family LJC78_08940 PF00227 Proteasome subunit LJC78_08945 PF07724 AAA domain (Cdc48 subfamily) LJC78_08945 PF10431 C-terminal, D2-small domain, of ClpB protein LJC78_08945 PF00004 ATPase family associated with various cellular activities (AAA) LJC78_08950 PF06018 CodY GAF-like domain LJC78_08950 PF08222 CodY helix-turn-helix domain LJC78_08955 PF00460 Flagella basal body rod protein LJC78_08960 PF06429 Flagellar basal body rod FlgEFG protein C-terminal LJC78_08960 PF00460 Flagella basal body rod protein LJC78_08965 PF02049 Flagellar hook-basal body complex protein FliE LJC78_08975 PF14842 FliG N-terminal domain LJC78_08975 PF14841 FliG middle domain LJC78_08975 PF01706 FliG C-terminal domain LJC78_08980 PF02108 Flagellar assembly protein FliH LJC78_08985 PF18269 T3SS EscN ATPase C-terminal domain LJC78_08985 PF02874 ATP synthase alpha/beta family, beta-barrel domain LJC78_08985 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain LJC78_08990 PF02050 Flagellar FliJ protein LJC78_08995 PF03448 MgtE intracellular N domain LJC78_09000 PF02120 Flagellar hook-length control protein FliK LJC78_09005 PF03963 Flagellar hook capping protein - N-terminal region LJC78_09010 PF00460 Flagella basal body rod protein LJC78_09010 PF06429 Flagellar basal body rod FlgEFG protein C-terminal LJC78_09015 PF06289 Flagellar and Swarming motility proteins LJC78_09020 PF03748 Flagellar basal body-associated protein FliL LJC78_09025 PF02154 Flagellar motor switch protein FliM LJC78_09025 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term LJC78_09030 PF04509 CheC-like family LJC78_09030 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term LJC78_09035 PF00072 Response regulator receiver domain LJC78_09040 PF04347 Flagellar biosynthesis protein, FliO LJC78_09045 PF00813 FliP family LJC78_09050 PF01313 Bacterial export proteins, family 3 LJC78_09060 PF01312 FlhB HrpN YscU SpaS Family LJC78_09065 PF00771 FHIPEP family LJC78_09070 PF00448 SRP54-type protein, GTPase domain LJC78_09075 PF10609 NUBPL iron-transfer P-loop NTPase LJC78_09080 PF01339 CheB methylesterase LJC78_09080 PF00072 Response regulator receiver domain LJC78_09085 PF01584 CheW-like domain LJC78_09085 PF02895 Signal transducing histidine kinase, homodimeric domain LJC78_09085 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LJC78_09085 PF07194 P2 response regulator binding domain LJC78_09085 PF01627 Hpt domain LJC78_09090 PF01584 CheW-like domain LJC78_09100 PF03975 CheD chemotactic sensory transduction LJC78_09105 PF04542 Sigma-70 region 2 LJC78_09105 PF04539 Sigma-70 region 3 LJC78_09105 PF04545 Sigma-70, region 4 LJC78_09115 PF00318 Ribosomal protein S2 LJC78_09120 PF00889 Elongation factor TS LJC78_09125 PF00696 Amino acid kinase family LJC78_09130 PF01765 Ribosome recycling factor LJC78_09135 PF01255 Putative undecaprenyl diphosphate synthase LJC78_09145 PF13288 DXP reductoisomerase C-terminal domain LJC78_09145 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase LJC78_09145 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain LJC78_09150 PF17820 PDZ domain LJC78_09150 PF02163 Peptidase family M50 LJC78_09155 PF03129 Anticodon binding domain LJC78_09155 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) LJC78_09155 PF04073 Aminoacyl-tRNA editing domain LJC78_09160 PF00929 Exonuclease LJC78_09160 PF02811 PHP domain LJC78_09160 PF07733 Bacterial DNA polymerase III alpha NTPase domain LJC78_09160 PF11490 DNA polymerase III polC-type N-terminus II LJC78_09160 PF14579 Helix-hairpin-helix motif LJC78_09160 PF17657 Bacterial DNA polymerase III alpha subunit finger domain LJC78_09160 PF14480 DNA polymerase III polC-type N-terminus I LJC78_09165 PF17384 RimP C-terminal SH3 domain LJC78_09165 PF02576 RimP N-terminal domain LJC78_09170 PF13184 NusA-like KH domain LJC78_09170 PF08529 NusA N-terminal domain LJC78_09170 PF00575 S1 RNA binding domain LJC78_09175 PF04296 Protein of unknown function (DUF448) LJC78_09180 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family LJC78_09185 PF11987 Translation-initiation factor 2 LJC78_09185 PF04760 Translation initiation factor IF-2, N-terminal region LJC78_09185 PF00009 Elongation factor Tu GTP binding domain LJC78_09190 PF04456 Protein of unknown function (DUF503) LJC78_09195 PF02033 Ribosome-binding factor A LJC78_09200 PF16198 tRNA pseudouridylate synthase B C-terminal domain LJC78_09200 PF01509 TruB family pseudouridylate synthase (N terminal domain) LJC78_09205 PF01687 Riboflavin kinase LJC78_09205 PF06574 FAD synthetase LJC78_09210 PF00312 Ribosomal protein S15 LJC78_09215 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain LJC78_09215 PF01138 3' exoribonuclease family, domain 1 LJC78_09215 PF03725 3' exoribonuclease family, domain 2 LJC78_09215 PF00575 S1 RNA binding domain LJC78_09215 PF00013 KH domain LJC78_09220 PF01522 Polysaccharide deacetylase LJC78_09225 PF00675 Insulinase (Peptidase family M16) LJC78_09225 PF05193 Peptidase M16 inactive domain LJC78_09230 PF05239 PRC-barrel domain LJC78_09235 PF01262 Alanine dehydrogenase/PNT, C-terminal domain LJC78_09235 PF16924 Dipicolinate synthase subunit A N-terminal domain LJC78_09240 PF02441 Flavoprotein LJC78_09245 PF02774 Semialdehyde dehydrogenase, dimerisation domain LJC78_09245 PF01118 Semialdehyde dehydrogenase, NAD binding domain LJC78_09250 PF13840 ACT domain LJC78_09250 PF00696 Amino acid kinase family LJC78_09255 PF00701 Dihydrodipicolinate synthetase family LJC78_09260 PF00753 Metallo-beta-lactamase superfamily LJC78_09260 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain LJC78_09260 PF17770 Ribonuclease J C-terminal domain LJC78_09265 PF00574 Clp protease LJC78_09270 PF14035 YlzJ-like protein LJC78_09275 PF17854 FtsK alpha domain LJC78_09275 PF09397 Ftsk gamma domain LJC78_09275 PF01580 FtsK/SpoIIIE family LJC78_09280 PF00392 Bacterial regulatory proteins, gntR family LJC78_09280 PF07702 UTRA domain LJC78_09285 PF07690 Major Facilitator Superfamily LJC78_09290 PF05193 Peptidase M16 inactive domain LJC78_09295 PF00675 Insulinase (Peptidase family M16) LJC78_09295 PF05193 Peptidase M16 inactive domain LJC78_09305 PF11588 Protein of unknown function (DUF3243) LJC78_09310 PF11868 Protein of unknown function (DUF3388) LJC78_09315 PF13464 Domain of unknown function (DUF4115) LJC78_09320 PF01066 CDP-alcohol phosphatidyltransferase LJC78_09325 PF02464 Competence-damaged protein LJC78_09325 PF00994 Probable molybdopterin binding domain LJC78_09325 PF18146 Damage-inducible protein CinA KH domain LJC78_09330 PF00154 recA bacterial DNA recombination protein LJC78_09335 PF00144 Beta-lactamase LJC78_09340 PF00013 KH domain LJC78_09340 PF01966 HD domain LJC78_09340 PF12072 Domain of unknown function (DUF3552) LJC78_09345 PF13277 YmdB-like protein LJC78_09350 PF04232 Stage V sporulation protein S (SpoVS) LJC78_09355 PF08240 Alcohol dehydrogenase GroES-like domain LJC78_09355 PF00107 Zinc-binding dehydrogenase LJC78_09360 PF00155 Aminotransferase class I and II LJC78_09365 PF04055 Radical SAM superfamily LJC78_09365 PF01938 TRAM domain LJC78_09365 PF00919 Uncharacterized protein family UPF0004 LJC78_09370 PF06133 Control of competence regulator ComK, YlbF/YmcA LJC78_09375 PF10628 Outer spore coat protein E (CotE) LJC78_09380 PF01624 MutS domain I LJC78_09380 PF05192 MutS domain III LJC78_09380 PF05190 MutS family domain IV LJC78_09380 PF00488 MutS domain V LJC78_09380 PF05188 MutS domain II LJC78_09385 PF01119 DNA mismatch repair protein, C-terminal domain LJC78_09385 PF08676 MutL C terminal dimerisation domain LJC78_09390 PF17356 Phage-like element PBSX protein XtrA LJC78_09405 PF02368 Bacterial Ig-like domain (group 2) LJC78_09480 PF14184 Regulatory protein YrvL LJC78_09490 PF00440 Bacterial regulatory proteins, tetR family LJC78_09490 PF13977 BetI-type transcriptional repressor, C-terminal LJC78_09505 PF00082 Subtilase family LJC78_09515 PF05908 Poly-gamma-glutamate hydrolase LJC78_09520 PF02566 OsmC-like protein LJC78_09525 PF00893 Small Multidrug Resistance protein LJC78_09530 PF00893 Small Multidrug Resistance protein LJC78_09540 PF12788 YmaF family LJC78_09550 PF17209 Hfq protein LJC78_09555 PF14157 YmzC-like protein LJC78_09565 PF07972 NrdI Flavodoxin like LJC78_09570 PF00317 Ribonucleotide reductase, all-alpha domain LJC78_09570 PF08343 Ribonucleotide reductase N-terminal LJC78_09570 PF02867 Ribonucleotide reductase, barrel domain LJC78_09575 PF00268 Ribonucleotide reductase, small chain LJC78_09585 PF01520 N-acetylmuramoyl-L-alanine amidase LJC78_09585 PF05036 Sporulation related domain LJC78_09590 PF00004 ATPase family associated with various cellular activities (AAA) LJC78_09590 PF17866 AAA lid domain LJC78_09595 PF16360 GTP-binding GTPase Middle Region LJC78_09595 PF13167 GTP-binding GTPase N-terminal LJC78_09595 PF01926 50S ribosome-binding GTPase LJC78_09600 PF06838 Methionine gamma-lyase LJC78_09605 PF13411 MerR HTH family regulatory protein LJC78_09610 PF03951 Glutamine synthetase, beta-Grasp domain LJC78_09610 PF00120 Glutamine synthetase, catalytic domain LJC78_09615 PF00589 Phage integrase family LJC78_09615 PF02899 Phage integrase, N-terminal SAM-like domain LJC78_09635 PF03374 Phage antirepressor protein KilAC domain LJC78_09635 PF09669 Phage regulatory protein Rha (Phage_pRha) LJC78_09780 PF01464 Transglycosylase SLT domain LJC78_09815 PF10960 BhlA holin family LJC78_09820 PF04688 SPP1 phage holin LJC78_09825 PF01471 Putative peptidoglycan binding domain LJC78_09825 PF01476 LysM domain LJC78_09825 PF01510 N-acetylmuramoyl-L-alanine amidase LJC78_09835 PF04740 LXG domain of WXG superfamily LJC78_09835 PF14411 A nuclease of the HNH/ENDO VII superfamily with conserved LHH LJC78_09880 PF01695 IstB-like ATP binding protein LJC78_09885 PF00665 Integrase core domain LJC78_09905 PF13443 Cro/C1-type HTH DNA-binding domain LJC78_09955 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain LJC78_09955 PF04616 Glycosyl hydrolases family 43 LJC78_09960 PF00480 ROK family LJC78_09965 PF01261 Xylose isomerase-like TIM barrel LJC78_09970 PF02782 FGGY family of carbohydrate kinases, C-terminal domain LJC78_09970 PF00370 FGGY family of carbohydrate kinases, N-terminal domain LJC78_09980 PF00872 Transposase, Mutator family LJC78_09985 PF00565 Staphylococcal nuclease homologue LJC78_09990 PF00083 Sugar (and other) transporter LJC78_09995 PF01168 Alanine racemase, N-terminal domain LJC78_09995 PF00842 Alanine racemase, C-terminal domain LJC78_10010 PF00692 dUTPase LJC78_10025 PF00303 Thymidylate synthase LJC78_10035 PF15493 Domain of unknown function, YrpD LJC78_10040 PF14037 YoqO-like protein LJC78_10050 PF02416 mttA/Hcf106 family LJC78_10070 PF08327 Activator of Hsp90 ATPase homolog 1-like protein LJC78_10095 PF13761 Domain of unknown function (DUF4166) LJC78_10100 PF14158 YndJ-like protein LJC78_10110 PF05908 Poly-gamma-glutamate hydrolase LJC78_10115 PF10710 Protein of unknown function (DUF2512) LJC78_10120 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily LJC78_10130 PF00717 Peptidase S24-like LJC78_10130 PF01726 LexA DNA binding domain LJC78_10135 PF01476 LysM domain LJC78_10140 PF00239 Resolvase, N terminal domain LJC78_10145 PF05979 Bacterial protein of unknown function (DUF896) LJC78_10150 PF02779 Transketolase, pyrimidine binding domain LJC78_10150 PF02780 Transketolase, C-terminal domain LJC78_10150 PF00456 Transketolase, thiamine diphosphate binding domain LJC78_10155 PF10747 Sporulation inhibitor of replication protein SirA LJC78_10160 PF03672 Uncharacterised protein family (UPF0154) LJC78_10165 PF09388 Spo0E like sporulation regulatory protein LJC78_10170 PF02683 Cytochrome C biogenesis protein transmembrane region LJC78_10175 PF00072 Response regulator receiver domain LJC78_10180 PF07301 Protein of unknown function (DUF1453) LJC78_10185 PF11084 Protein of unknown function (DUF2621) LJC78_10195 PF08179 Small acid-soluble spore protein P family LJC78_10205 PF00694 Aconitase C-terminal domain LJC78_10205 PF00330 Aconitase family (aconitate hydratase) LJC78_10210 PF00578 AhpC/TSA family LJC78_10215 PF13040 Fur-regulated basic protein B LJC78_10220 PF08177 Small acid-soluble spore protein N family LJC78_10230 PF03061 Thioesterase superfamily LJC78_10240 PF01521 Iron-sulphur cluster biosynthesis LJC78_10245 PF02660 Glycerol-3-phosphate acyltransferase LJC78_10250 PF13380 CoA binding domain LJC78_10255 PF01751 Toprim domain LJC78_10255 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LJC78_10255 PF00986 DNA gyrase B subunit, carboxyl terminus LJC78_10255 PF00204 DNA gyrase B LJC78_10260 PF03989 DNA gyrase C-terminal domain, beta-propeller LJC78_10260 PF00521 DNA gyrase/topoisomerase IV, subunit A LJC78_10270 PF01235 Sodium:alanine symporter family LJC78_10275 PF00942 Cellulose binding domain LJC78_10275 PF00150 Cellulase (glycosyl hydrolase family 5) LJC78_10280 PF17452 Uncharacterized YnfE-like LJC78_10285 PF17189 Glycosyl hydrolase family 30 beta sandwich domain LJC78_10295 PF04138 GtrA-like protein LJC78_10300 PF00483 Nucleotidyl transferase LJC78_10305 PF09335 SNARE associated Golgi protein LJC78_10315 PF01039 Carboxyl transferase domain LJC78_10320 PF00378 Enoyl-CoA hydratase/isomerase LJC78_10325 PF00682 HMGL-like LJC78_10330 PF00364 Biotin-requiring enzyme LJC78_10335 PF00289 Biotin carboxylase, N-terminal domain LJC78_10335 PF02785 Biotin carboxylase C-terminal domain LJC78_10335 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain LJC78_10340 PF00501 AMP-binding enzyme LJC78_10340 PF13193 AMP-binding enzyme C-terminal domain LJC78_10345 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LJC78_10345 PF02770 Acyl-CoA dehydrogenase, middle domain LJC78_10345 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LJC78_10350 PF17329 Family of unknown function (DUF5367) LJC78_10360 PF02638 Glycosyl hydrolase-like 10 LJC78_10365 PF07098 Protein of unknown function (DUF1360) LJC78_10375 PF13193 AMP-binding enzyme C-terminal domain LJC78_10375 PF00501 AMP-binding enzyme LJC78_10375 PF00550 Phosphopantetheine attachment site LJC78_10375 PF00668 Condensation domain LJC78_10380 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family LJC78_10385 PF01263 Aldose 1-epimerase LJC78_10390 PF01554 MatE LJC78_10395 PF16800 IseA DL-endopeptidase inhibitor LJC78_10410 PF00589 Phage integrase family LJC78_10415 PF12728 Helix-turn-helix domain LJC78_10425 PF03466 LysR substrate binding domain LJC78_10425 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LJC78_10430 PF08240 Alcohol dehydrogenase GroES-like domain LJC78_10430 PF00107 Zinc-binding dehydrogenase LJC78_10435 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster LJC78_10435 PF07992 Pyridine nucleotide-disulphide oxidoreductase LJC78_10440 PF00310 Glutamine amidotransferases class-II LJC78_10440 PF04898 Glutamate synthase central domain LJC78_10440 PF01645 Conserved region in glutamate synthase LJC78_10440 PF01493 GXGXG motif LJC78_10445 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LJC78_10445 PF03466 LysR substrate binding domain LJC78_10470 PF02334 Replication terminator protein LJC78_10475 PF00106 short chain dehydrogenase LJC78_10480 PF06103 Bacterial protein of unknown function (DUF948) LJC78_10490 PF13302 Acetyltransferase (GNAT) domain LJC78_10505 PF00005 ABC transporter LJC78_10515 PF07690 Major Facilitator Superfamily LJC78_10520 PF00872 Transposase, Mutator family LJC78_10555 PF00872 Transposase, Mutator family LJC78_10575 PF00144 Beta-lactamase LJC78_10585 PF17094 Uncharacterised protein family (UPF0715) LJC78_10600 PF13021 Domain of unknown function (DUF3885) LJC78_10610 PF00899 ThiF family LJC78_10615 PF01209 ubiE/COQ5 methyltransferase family LJC78_10620 PF07690 Major Facilitator Superfamily LJC78_10625 PF00872 Transposase, Mutator family LJC78_10655 PF13302 Acetyltransferase (GNAT) domain LJC78_10675 PF14411 A nuclease of the HNH/ENDO VII superfamily with conserved LHH LJC78_10675 PF04740 LXG domain of WXG superfamily LJC78_10680 PF09346 SMI1 / KNR4 family (SUKH-1) LJC78_10685 PF01593 Flavin containing amine oxidoreductase LJC78_10690 PF01588 Putative tRNA binding domain LJC78_10695 PF12833 Helix-turn-helix domain LJC78_10695 PF07883 Cupin domain LJC78_10700 PF00583 Acetyltransferase (GNAT) family LJC78_10705 PF13305 Tetracyclin repressor-like, C-terminal domain LJC78_10705 PF00440 Bacterial regulatory proteins, tetR family LJC78_10710 PF00753 Metallo-beta-lactamase superfamily LJC78_10715 PF06445 GyrI-like small molecule binding domain LJC78_10720 PF08279 HTH domain LJC78_10720 PF13280 WYL domain LJC78_10730 PF01022 Bacterial regulatory protein, arsR family LJC78_10740 PF04238 Protein of unknown function (DUF420) LJC78_10755 PF02016 LD-carboxypeptidase N-terminal domain LJC78_10755 PF17676 LD-carboxypeptidase C-terminal domain LJC78_10760 PF00487 Fatty acid desaturase LJC78_10765 PF07730 Histidine kinase LJC78_10770 PF00196 Bacterial regulatory proteins, luxR family LJC78_10770 PF00072 Response regulator receiver domain LJC78_10775 PF06725 3D domain LJC78_10775 PF01476 LysM domain LJC78_10780 PF09382 RQC domain LJC78_10780 PF16124 RecQ zinc-binding LJC78_10780 PF00570 HRDC domain LJC78_10780 PF00271 Helicase conserved C-terminal domain LJC78_10780 PF00270 DEAD/DEAH box helicase LJC78_10790 PF02525 Flavodoxin-like fold LJC78_10795 PF01258 Prokaryotic dksA/traR C4-type zinc finger LJC78_10810 PF00011 Hsp20/alpha crystallin family LJC78_10825 PF08000 Bacterial PH domain LJC78_10835 PF00171 Aldehyde dehydrogenase family LJC78_10840 PF13249 Squalene-hopene cyclase N-terminal domain LJC78_10840 PF13243 Squalene-hopene cyclase C-terminal domain LJC78_10845 PF02777 Iron/manganese superoxide dismutases, C-terminal domain LJC78_10845 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain LJC78_10850 PF00209 Sodium:neurotransmitter symporter family LJC78_10855 PF01758 Sodium Bile acid symporter family LJC78_10860 PF02817 e3 binding domain LJC78_10860 PF00364 Biotin-requiring enzyme LJC78_10860 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) LJC78_10865 PF02779 Transketolase, pyrimidine binding domain LJC78_10865 PF16870 2-oxoglutarate dehydrogenase C-terminal LJC78_10865 PF00676 Dehydrogenase E1 component LJC78_10870 PF00092 von Willebrand factor type A domain LJC78_10875 PF07728 AAA domain (dynein-related subfamily) LJC78_10880 PF00080 Copper/zinc superoxide dismutase (SODC) LJC78_10880 PF13627 Prokaryotic lipoprotein-attachment site LJC78_10885 PF00877 NlpC/P60 family LJC78_10885 PF01476 LysM domain LJC78_10890 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase LJC78_10895 PF02457 DisA bacterial checkpoint controller nucleotide-binding LJC78_10895 PF10372 Bacterial membrane-spanning protein N-terminus LJC78_10900 PF01554 MatE LJC78_10905 PF01740 STAS domain LJC78_10910 PF02585 GlcNAc-PI de-N-acetylase LJC78_10915 PF08830 Protein of unknown function (DUF1806) LJC78_10925 PF00892 EamA-like transporter family LJC78_10945 PF14552 Tautomerase enzyme LJC78_10950 PF01638 HxlR-like helix-turn-helix LJC78_10955 PF00881 Nitroreductase family LJC78_10965 PF01738 Dienelactone hydrolase family LJC78_10975 PF11755 Protein of unknown function (DUF3311) LJC78_10980 PF00474 Sodium:solute symporter family LJC78_10985 PF17820 PDZ domain LJC78_10985 PF03572 Peptidase family S41 LJC78_10985 PF01471 Putative peptidoglycan binding domain LJC78_10990 PF08241 Methyltransferase domain LJC78_11000 PF02557 D-alanyl-D-alanine carboxypeptidase LJC78_11005 PF01048 Phosphorylase superfamily LJC78_11015 PF14191 YodL-like LJC78_11020 PF01569 PAP2 superfamily LJC78_11025 PF14162 YozD-like protein LJC78_11040 PF06855 YozE SAM-like fold LJC78_11045 PF14122 YokU-like protein, putative antitoxin LJC78_11050 PF12544 Lysine-2,3-aminomutase LJC78_11055 PF00583 Acetyltransferase (GNAT) family LJC78_11060 PF07687 Peptidase dimerisation domain LJC78_11060 PF01546 Peptidase family M20/M25/M40 LJC78_11065 PF01144 Coenzyme A transferase LJC78_11070 PF01144 Coenzyme A transferase LJC78_11075 PF00202 Aminotransferase class-III LJC78_11090 PF00583 Acetyltransferase (GNAT) family LJC78_11095 PF00535 Glycosyl transferase family 2 LJC78_11110 PF12996 DUF based on E. rectale Gene description (DUF3880) LJC78_11115 PF02333 Phytase LJC78_11120 PF02719 Polysaccharide biosynthesis protein LJC78_11125 PF01641 SelR domain LJC78_11130 PF01625 Peptide methionine sulfoxide reductase LJC78_11135 PF01047 MarR family LJC78_11140 PF01554 MatE LJC78_11145 PF17431 Uncharacterized YmpT-like LJC78_11150 PF09911 Uncharacterized protein conserved in bacteria (DUF2140) LJC78_11155 PF13472 GDSL-like Lipase/Acylhydrolase family LJC78_11160 PF02630 SCO1/SenC LJC78_11165 PF10751 Protein of unknown function (DUF2535) LJC78_11170 PF00585 C-terminal regulatory domain of Threonine dehydratase LJC78_11170 PF00291 Pyridoxal-phosphate dependent enzyme LJC78_11175 PF08461 Ribonuclease R winged-helix domain LJC78_11175 PF00158 Sigma-54 interaction domain LJC78_11180 PF03006 Haemolysin-III related LJC78_11190 PF00186 Dihydrofolate reductase LJC78_11195 PF04608 Phosphatidylglycerophosphatase A LJC78_11200 PF14005 YpjP-like protein LJC78_11205 PF04445 Putative SAM-dependent methyltransferase LJC78_11210 PF06491 Disulphide isomerase LJC78_11215 PF00920 Dehydratase family LJC78_11220 PF08712 Scaffold protein Nfu/NifU N terminal LJC78_11220 PF13769 Virulence factor LJC78_11225 PF01966 HD domain LJC78_11230 PF00255 Glutathione peroxidase LJC78_11235 PF04204 Homoserine O-succinyltransferase LJC78_11240 PF00534 Glycosyl transferases group 1 LJC78_11240 PF06925 Monogalactosyldiacylglycerol (MGDG) synthase LJC78_11250 PF00313 'Cold-shock' DNA-binding domain LJC78_11260 PF10819 Protein of unknown function (DUF2564) LJC78_11265 PF10782 Zinc-finger LJC78_11270 PF13456 Reverse transcriptase-like LJC78_11275 PF02592 Putative vitamin uptake transporter LJC78_11280 PF13456 Reverse transcriptase-like LJC78_11290 PF01367 5'-3' exonuclease, C-terminal SAM fold LJC78_11290 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain LJC78_11300 PF10752 Protein of unknown function (DUF2533) LJC78_11305 PF00350 Dynamin family LJC78_11315 PF04140 Isoprenylcysteine carboxyl methyltransferase (ICMT) family LJC78_11320 PF00195 Chalcone and stilbene synthases, N-terminal domain LJC78_11320 PF02797 Chalcone and stilbene synthases, C-terminal domain LJC78_11325 PF00860 Permease family LJC78_11330 PF00156 Phosphoribosyl transferase domain LJC78_11335 PF02074 Carboxypeptidase Taq (M32) metallopeptidase LJC78_11340 PF03812 2-keto-3-deoxygluconate permease LJC78_11345 PF01081 KDPG and KHG aldolase LJC78_11350 PF00294 pfkB family carbohydrate kinase LJC78_11355 PF00356 Bacterial regulatory proteins, lacI family LJC78_11360 PF04962 KduI/IolB family LJC78_11370 PF13307 Helicase C-terminal domain LJC78_11380 PF14139 YpzG-like protein LJC78_11385 PF01170 Putative RNA methylase family UPF0020 LJC78_11385 PF02926 THUMP domain LJC78_11395 PF05103 DivIVA protein LJC78_11400 PF06908 YspA SLOG family LJC78_11405 PF11122 Inner spore coat protein D LJC78_11415 PF13482 RNase_H superfamily LJC78_11420 PF00270 DEAD/DEAH box helicase LJC78_11420 PF09369 Domain of unknown function (DUF1998) LJC78_11420 PF00271 Helicase conserved C-terminal domain LJC78_11425 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 LJC78_11435 PF14179 YppG-like protein LJC78_11440 PF14178 YppF-like protein LJC78_11445 PF08807 Bacterial domain of unknown function (DUF1798) LJC78_11450 PF17522 Family of unknown function (DUF5446) LJC78_11460 PF10720 Protein of unknown function (DUF2515) LJC78_11465 PF03838 Recombination protein U LJC78_11470 PF00912 Transglycosylase LJC78_11470 PF00905 Penicillin binding protein transpeptidase domain LJC78_11480 PF10576 Iron-sulfur binding domain of endonuclease III LJC78_11480 PF00730 HhH-GPD superfamily base excision DNA repair protein LJC78_11480 PF00633 Helix-hairpin-helix motif LJC78_11485 PF07261 Replication initiation and membrane attachment LJC78_11490 PF00152 tRNA synthetases class II (D, K and N) LJC78_11490 PF01336 OB-fold nucleic acid binding domain LJC78_11495 PF00155 Aminotransferase class I and II LJC78_11500 PF17881 Domain of unknown function (DUF5590) LJC78_11500 PF03413 Peptidase propeptide and YPEB domain LJC78_11505 PF14084 Protein of unknown function (DUF4264) LJC78_11510 PF13307 Helicase C-terminal domain LJC78_11510 PF04851 Type III restriction enzyme, res subunit LJC78_11510 PF00929 Exonuclease LJC78_11515 PF02261 Aspartate decarboxylase LJC78_11520 PF02569 Pantoate-beta-alanine ligase LJC78_11525 PF02548 Ketopantoate hydroxymethyltransferase LJC78_11530 PF02237 Biotin protein ligase C terminal domain LJC78_11530 PF08279 HTH domain LJC78_11530 PF03099 Biotin/lipoate A/B protein ligase family LJC78_11535 PF01743 Poly A polymerase head domain LJC78_11535 PF12627 Probable RNA and SrmB- binding site of polymerase A LJC78_11535 PF13735 tRNA nucleotidyltransferase domain 2 putative LJC78_11540 PF13439 Glycosyltransferase Family 4 LJC78_11540 PF00534 Glycosyl transferases group 1 LJC78_11545 PF02585 GlcNAc-PI de-N-acetylase LJC78_11550 PF02142 MGS-like domain LJC78_11555 PF05173 Dihydrodipicolinate reductase, C-terminus LJC78_11555 PF01113 Dihydrodipicolinate reductase, N-terminus LJC78_11560 PF03819 MazG nucleotide pyrophosphohydrolase domain LJC78_11565 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 LJC78_11565 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) LJC78_11570 PF09577 Sporulation protein YpjB (SpoYpjB) LJC78_11575 PF07187 Protein of unknown function (DUF1405) LJC78_11580 PF00032 Cytochrome b(C-terminal)/b6/petD LJC78_11580 PF13442 Cytochrome C oxidase, cbb3-type, subunit III LJC78_11585 PF00033 Cytochrome b/b6/petB LJC78_11590 PF00355 Rieske [2Fe-2S] domain LJC78_11595 PF10673 Protein of unknown function (DUF2487) LJC78_11600 PF08858 IDEAL domain LJC78_11600 PF08864 UPF0302 domain LJC78_11610 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) LJC78_11615 PF01842 ACT domain LJC78_11615 PF02153 Prephenate dehydrogenase LJC78_11620 PF00155 Aminotransferase class I and II LJC78_11625 PF00290 Tryptophan synthase alpha chain LJC78_11630 PF00291 Pyridoxal-phosphate dependent enzyme LJC78_11635 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase LJC78_11640 PF00218 Indole-3-glycerol phosphate synthase LJC78_11645 PF02885 Glycosyl transferase family, helical bundle domain LJC78_11645 PF00591 Glycosyl transferase family, a/b domain LJC78_11650 PF04715 Anthranilate synthase component I, N terminal region LJC78_11650 PF00425 chorismate binding enzyme LJC78_11655 PF07736 Chorismate mutase type I LJC78_11660 PF01761 3-dehydroquinate synthase LJC78_11665 PF01264 Chorismate synthase LJC78_11670 PF01739 CheR methyltransferase, SAM binding domain LJC78_11670 PF03705 CheR methyltransferase, all-alpha domain LJC78_11675 PF00334 Nucleoside diphosphate kinase LJC78_11680 PF00348 Polyprenyl synthetase LJC78_11685 PF01209 ubiE/COQ5 methyltransferase family LJC78_11690 PF07307 Heptaprenyl diphosphate synthase (HEPPP synthase) subunit 1 LJC78_11695 PF02081 Tryptophan RNA-binding attenuator protein LJC78_11700 PF01227 GTP cyclohydrolase I LJC78_11705 PF00216 Bacterial DNA-binding protein LJC78_11710 PF09547 Stage IV sporulation protein A (spore_IV_A) LJC78_11720 PF10966 Protein of unknown function (DUF2768) LJC78_11725 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus LJC78_11725 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus LJC78_11730 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal LJC78_11730 PF01926 50S ribosome-binding GTPase LJC78_11740 PF14045 YIEGIA protein LJC78_11750 PF14140 YpzI-like protein LJC78_11755 PF01070 FMN-dependent dehydrogenase LJC78_11760 PF00575 S1 RNA binding domain LJC78_11765 PF02224 Cytidylate kinase LJC78_11770 PF17313 Family of unknown function (DUF5359) LJC78_11775 PF12945 Flagellar protein YcgR LJC78_11775 PF07238 PilZ domain LJC78_11780 PF03413 Peptidase propeptide and YPEB domain LJC78_11780 PF14620 YpeB sporulation LJC78_11785 PF07486 Cell Wall Hydrolase LJC78_11785 PF01471 Putative peptidoglycan binding domain LJC78_11790 PF13367 PrsW family intramembrane metalloprotease LJC78_11800 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain LJC78_11800 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase LJC78_11805 PF05389 Negative regulator of genetic competence (MecA) LJC78_11810 PF00149 Calcineurin-like phosphoesterase LJC78_11815 PF10864 Protein of unknown function (DUF2663) LJC78_11820 PF01476 LysM domain LJC78_11825 PF02517 CPBP intramembrane metalloprotease LJC78_11830 PF00270 DEAD/DEAH box helicase LJC78_11830 PF00271 Helicase conserved C-terminal domain LJC78_11835 PF14493 Helix-turn-helix domain LJC78_11845 PF12822 ECF transporter, substrate-specific component LJC78_11850 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain LJC78_11850 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain LJC78_11850 PF01842 ACT domain LJC78_11855 PF01487 Type I 3-dehydroquinase LJC78_11865 PF04542 Sigma-70 region 2 LJC78_11865 PF08281 Sigma-70, region 4 LJC78_11870 PF00672 HAMP domain LJC78_11870 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LJC78_11870 PF18698 Histidine kinase sensor domain LJC78_11870 PF00512 His Kinase A (phospho-acceptor) domain LJC78_11870 PF00989 PAS fold LJC78_11875 PF00072 Response regulator receiver domain LJC78_11875 PF00486 Transcriptional regulatory protein, C terminal LJC78_11880 PF01578 Cytochrome C assembly protein LJC78_11885 PF05140 ResB-like family LJC78_11890 PF00578 AhpC/TSA family LJC78_11895 PF01479 S4 domain LJC78_11895 PF00849 RNA pseudouridylate synthase LJC78_11900 PF07670 Nucleoside recognition LJC78_11905 PF07670 Nucleoside recognition LJC78_11910 PF00768 D-alanyl-D-alanine carboxypeptidase LJC78_11910 PF07943 Penicillin-binding protein 5, C-terminal domain LJC78_11915 PF13047 Protein of unknown function (DUF3907) LJC78_11920 PF04079 Segregation and condensation complex subunit ScpB LJC78_11925 PF02616 Segregation and condensation protein ScpA LJC78_11930 PF03745 Domain of unknown function (DUF309) LJC78_11935 PF00583 Acetyltransferase (GNAT) family LJC78_11940 PF00885 6,7-dimethyl-8-ribityllumazine synthase LJC78_11945 PF00925 GTP cyclohydrolase II LJC78_11945 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase LJC78_11950 PF00677 Lumazine binding domain LJC78_11955 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region LJC78_11955 PF01872 RibD C-terminal domain LJC78_11965 PF10502 Signal peptidase, peptidase S26 LJC78_11975 PF09855 Nucleic-acid-binding protein containing Zn-ribbon domain (DUF2082) LJC78_11980 PF10676 Spore germination protein gerPA/gerPF LJC78_11990 PF01609 Transposase DDE domain LJC78_12030 PF00872 Transposase, Mutator family LJC78_12080 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD LJC78_12090 PF06207 Protein of unknown function (DUF1002) LJC78_12095 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain LJC78_12095 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain LJC78_12100 PF03323 Bacillus/Clostridium GerA spore germination protein LJC78_12105 PF14097 Stage V sporulation protein AE1 LJC78_12110 PF03862 SpoVAC/SpoVAEB sporulation membrane protein LJC78_12115 PF07451 Stage V sporulation protein AD (SpoVAD) LJC78_12120 PF03862 SpoVAC/SpoVAEB sporulation membrane protein LJC78_12125 PF13782 Stage V sporulation protein AB LJC78_12130 PF12164 Stage V sporulation protein AA LJC78_12135 PF04539 Sigma-70 region 3 LJC78_12135 PF04542 Sigma-70 region 2 LJC78_12135 PF04545 Sigma-70, region 4 LJC78_12140 PF13581 Histidine kinase-like ATPase domain LJC78_12145 PF01740 STAS domain LJC78_12150 PF07943 Penicillin-binding protein 5, C-terminal domain LJC78_12150 PF00768 D-alanyl-D-alanine carboxypeptidase LJC78_12155 PF01048 Phosphorylase superfamily LJC78_12160 PF01676 Metalloenzyme superfamily LJC78_12165 PF02899 Phage integrase, N-terminal SAM-like domain LJC78_12165 PF00589 Phage integrase family LJC78_12170 PF14004 Protein of unknown function (DUF4227) LJC78_12175 PF01475 Ferric uptake regulator family LJC78_12180 PF01944 Stage II sporulation protein M LJC78_12190 PF03949 Malic enzyme, NAD binding domain LJC78_12190 PF00390 Malic enzyme, N-terminal domain LJC78_12190 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain LJC78_12195 PF03553 Na+/H+ antiporter family LJC78_12200 PF00206 Lyase LJC78_12200 PF10415 Fumarase C C-terminus LJC78_12205 PF17763 Glutaminase/Asparaginase C-terminal domain LJC78_12205 PF00710 Asparaginase, N-terminal LJC78_12210 PF01381 Helix-turn-helix LJC78_12220 PF00293 NUDIX domain LJC78_12225 PF13072 Mother cell inhibitor of FtsZ LJC78_12230 PF00248 Aldo/keto reductase family LJC78_12235 PF13025 Protein of unknown function (DUF3886) LJC78_12240 PF12146 Serine aminopeptidase, S33 LJC78_12245 PF10827 Protein of unknown function (DUF2552) LJC78_12250 PF01521 Iron-sulphur cluster biosynthesis LJC78_12255 PF13673 Acetyltransferase (GNAT) domain LJC78_12255 PF04229 GrpB protein LJC78_12260 PF03992 Antibiotic biosynthesis monooxygenase LJC78_12265 PF00583 Acetyltransferase (GNAT) family LJC78_12270 PF08863 YolD-like protein LJC78_12275 PF00817 impB/mucB/samB family LJC78_12275 PF11799 impB/mucB/samB family C-terminal domain LJC78_12280 PF14164 YqzH-like protein LJC78_12285 PF07690 Major Facilitator Superfamily LJC78_12300 PF00485 Phosphoribulokinase / Uridine kinase family LJC78_12305 PF00291 Pyridoxal-phosphate dependent enzyme LJC78_12310 PF00106 short chain dehydrogenase LJC78_12315 PF00753 Metallo-beta-lactamase superfamily LJC78_12320 PF03807 NADP oxidoreductase coenzyme F420-dependent LJC78_12320 PF14748 Pyrroline-5-carboxylate reductase dimerisation LJC78_12325 PF01546 Peptidase family M20/M25/M40 LJC78_12330 PF00724 NADH:flavin oxidoreductase / NADH oxidase family LJC78_12345 PF12146 Serine aminopeptidase, S33 LJC78_12350 PF00471 Ribosomal protein L33 LJC78_12355 PF12706 Beta-lactamase superfamily domain LJC78_12360 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain LJC78_12360 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain LJC78_12365 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase LJC78_12365 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain LJC78_12370 PF11799 impB/mucB/samB family C-terminal domain LJC78_12370 PF11798 IMS family HHH motif LJC78_12370 PF00817 impB/mucB/samB family LJC78_12380 PF02096 60Kd inner membrane protein LJC78_12385 PF09844 Uncharacterized conserved protein (COG2071) LJC78_12390 PF07687 Peptidase dimerisation domain LJC78_12390 PF01546 Peptidase family M20/M25/M40 LJC78_12410 PF03734 L,D-transpeptidase catalytic domain LJC78_12415 PF11728 Putative aromatic acid exporter C-terminal domain LJC78_12415 PF06081 Aromatic acid exporter family member 1 LJC78_12420 PF00005 ABC transporter LJC78_12425 PF00528 Binding-protein-dependent transport system inner membrane component LJC78_12430 PF00497 Bacterial extracellular solute-binding proteins, family 3 LJC78_12435 PF06491 Disulphide isomerase LJC78_12440 PF00781 Diacylglycerol kinase catalytic domain LJC78_12450 PF13411 MerR HTH family regulatory protein LJC78_12450 PF06445 GyrI-like small molecule binding domain LJC78_12455 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) LJC78_12455 PF02817 e3 binding domain LJC78_12455 PF00364 Biotin-requiring enzyme LJC78_12460 PF02779 Transketolase, pyrimidine binding domain LJC78_12460 PF02780 Transketolase, C-terminal domain LJC78_12465 PF00676 Dehydrogenase E1 component LJC78_12470 PF07992 Pyridine nucleotide-disulphide oxidoreductase LJC78_12470 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain LJC78_12475 PF00871 Acetokinase family LJC78_12480 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase LJC78_12480 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain LJC78_12485 PF01515 Phosphate acetyl/butaryl transferase LJC78_12490 PF02954 Bacterial regulatory protein, Fis family LJC78_12490 PF00989 PAS fold LJC78_12490 PF00158 Sigma-54 interaction domain LJC78_12495 PF11118 Protein of unknown function (DUF2627) LJC78_12505 PF03972 MmgE/PrpD family LJC78_12510 PF00285 Citrate synthase, C-terminal domain LJC78_12515 PF02770 Acyl-CoA dehydrogenase, middle domain LJC78_12515 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LJC78_12515 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LJC78_12520 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain LJC78_12520 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain LJC78_12525 PF02803 Thiolase, C-terminal domain LJC78_12525 PF00108 Thiolase, N-terminal domain LJC78_12530 PF03009 Glycerophosphoryl diester phosphodiesterase family LJC78_12535 PF01520 N-acetylmuramoyl-L-alanine amidase LJC78_12550 PF00724 NADH:flavin oxidoreductase / NADH oxidase family LJC78_12555 PF00072 Response regulator receiver domain LJC78_12555 PF08769 Sporulation initiation factor Spo0A C terminal LJC78_12560 PF17820 PDZ domain LJC78_12560 PF05580 SpoIVB peptidase S55 LJC78_12565 PF13476 AAA domain LJC78_12570 PF01316 Arginine repressor, DNA binding domain LJC78_12570 PF02863 Arginine repressor, C-terminal domain LJC78_12575 PF01728 FtsJ-like methyltransferase LJC78_12575 PF01479 S4 domain LJC78_12580 PF13292 1-deoxy-D-xylulose-5-phosphate synthase LJC78_12580 PF02779 Transketolase, pyrimidine binding domain LJC78_12580 PF02780 Transketolase, C-terminal domain LJC78_12585 PF00348 Polyprenyl synthetase LJC78_12590 PF02609 Exonuclease VII small subunit LJC78_12595 PF02601 Exonuclease VII, large subunit LJC78_12595 PF13742 OB-fold nucleic acid binding domain LJC78_12600 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain LJC78_12600 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain LJC78_12605 PF01029 NusB family LJC78_12610 PF03780 Asp23 family, cell envelope-related function LJC78_12615 PF02785 Biotin carboxylase C-terminal domain LJC78_12615 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain LJC78_12615 PF00289 Biotin carboxylase, N-terminal domain LJC78_12620 PF00364 Biotin-requiring enzyme LJC78_12635 PF12685 SpoIIIAH-like protein LJC78_12645 PF09581 Stage III sporulation protein AF (Spore_III_AF) LJC78_12650 PF09546 Stage III sporulation protein AE (spore_III_AE) LJC78_12655 PF06686 Stage III sporulation protein AC/AD protein family LJC78_12660 PF06686 Stage III sporulation protein AC/AD protein family LJC78_12665 PF09548 Stage III sporulation protein AB (spore_III_AB) LJC78_12675 PF10942 Protein of unknown function (DUF2619) LJC78_12680 PF01132 Elongation factor P (EF-P) OB domain LJC78_12680 PF08207 Elongation factor P (EF-P) KOW-like domain LJC78_12680 PF09285 Elongation factor P, C-terminal LJC78_12685 PF01321 Creatinase/Prolidase N-terminal domain LJC78_12685 PF00557 Metallopeptidase family M24 LJC78_12690 PF01220 Dehydroquinase class II LJC78_12695 PF11085 Conserved membrane protein YqhR LJC78_12700 PF07136 Protein of unknown function (DUF1385) LJC78_12710 PF01734 Patatin-like phospholipase LJC78_12715 PF02742 Iron dependent repressor, metal binding and dimerisation domain LJC78_12715 PF01325 Iron dependent repressor, N-terminal DNA binding domain LJC78_12720 PF03099 Biotin/lipoate A/B protein ligase family LJC78_12725 PF00581 Rhodanese-like domain LJC78_12730 PF02347 Glycine cleavage system P-protein LJC78_12735 PF02347 Glycine cleavage system P-protein LJC78_12740 PF01571 Aminomethyltransferase folate-binding domain LJC78_12740 PF08669 Glycine cleavage T-protein C-terminal barrel domain LJC78_12745 PF00271 Helicase conserved C-terminal domain LJC78_12745 PF00176 SNF2 family N-terminal domain LJC78_12750 PF11079 Bacterial protein YqhG of unknown function LJC78_12755 PF08671 Anti-repressor SinI LJC78_12760 PF01381 Helix-turn-helix LJC78_12760 PF08671 Anti-repressor SinI LJC78_12765 PF12389 Camelysin metallo-endopeptidase LJC78_12780 PF13028 Protein of unknown function (DUF3889) LJC78_12785 PF14038 YqzE-like protein LJC78_12790 PF14173 ComG operon protein 7 LJC78_12795 PF15980 Putative Competence protein ComGF LJC78_12805 PF07963 Prokaryotic N-terminal methylation motif LJC78_12810 PF07963 Prokaryotic N-terminal methylation motif LJC78_12815 PF00482 Type II secretion system (T2SS), protein F LJC78_12820 PF00437 Type II/IV secretion system protein LJC78_12825 PF00571 CBS domain LJC78_12830 PF01544 CorA-like Mg2+ transporter protein LJC78_12835 PF01595 Cyclin M transmembrane N-terminal domain LJC78_12835 PF03471 Transporter associated domain LJC78_12835 PF00571 CBS domain LJC78_12840 PF14361 RsbT co-antagonist protein rsbRD N-terminal domain LJC78_12840 PF01740 STAS domain LJC78_12850 PF03960 ArsC family LJC78_12855 PF11117 Protein of unknown function (DUF2626) LJC78_12860 PF00753 Metallo-beta-lactamase superfamily LJC78_12865 PF10958 Protein of unknown function (DUF2759) LJC78_12870 PF01910 Thiamine-binding protein LJC78_12880 PF00246 Zinc carboxypeptidase LJC78_12885 PF00884 Sulfatase LJC78_12890 PF00480 ROK family LJC78_12895 PF06014 Bacterial protein of unknown function (DUF910) LJC78_12900 PF01694 Rhomboid family LJC78_12910 PF01812 5-formyltetrahydrofolate cyclo-ligase family LJC78_12915 PF00471 Ribosomal protein L33 LJC78_12920 PF00534 Glycosyl transferases group 1 LJC78_12920 PF13439 Glycosyltransferase Family 4 LJC78_12940 PF00005 ABC transporter LJC78_12945 PF00005 ABC transporter LJC78_12950 PF00528 Binding-protein-dependent transport system inner membrane component LJC78_12955 PF00528 Binding-protein-dependent transport system inner membrane component LJC78_12960 PF12849 PBP superfamily domain LJC78_12965 PF03717 Penicillin-binding Protein dimerisation domain LJC78_12965 PF00905 Penicillin binding protein transpeptidase domain LJC78_12970 PF07690 Major Facilitator Superfamily LJC78_12975 PF02777 Iron/manganese superoxide dismutases, C-terminal domain LJC78_12975 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain LJC78_12980 PF04306 Protein of unknown function (DUF456) LJC78_12985 PF06691 Protein of unknown function (DUF1189) LJC78_12995 PF04551 GcpE protein LJC78_13010 PF01475 Ferric uptake regulator family LJC78_13015 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 LJC78_13015 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) LJC78_13020 PF11116 Protein of unknown function (DUF2624) LJC78_13025 PF01261 Xylose isomerase-like TIM barrel LJC78_13030 PF00270 DEAD/DEAH box helicase LJC78_13030 PF00271 Helicase conserved C-terminal domain LJC78_13035 PF14181 YqfQ-like protein LJC78_13040 PF02401 LytB protein LJC78_13045 PF01784 NIF3 (NGG1p interacting factor 3) LJC78_13050 PF04816 tRNA (adenine(22)-N(1))-methyltransferase LJC78_13055 PF13442 Cytochrome C oxidase, cbb3-type, subunit III LJC78_13060 PF04545 Sigma-70, region 4 LJC78_13060 PF03979 Sigma-70 factor, region 1.1 LJC78_13060 PF00140 Sigma-70 factor, region 1.2 LJC78_13060 PF04542 Sigma-70 region 2 LJC78_13060 PF04539 Sigma-70 region 3 LJC78_13065 PF10410 DnaB-helicase binding domain of primase LJC78_13065 PF08275 DNA primase catalytic core, N-terminal domain LJC78_13065 PF01807 CHC2 zinc finger LJC78_13070 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 LJC78_13075 PF03618 Kinase/pyrophosphorylase LJC78_13080 PF00571 CBS domain LJC78_13080 PF08279 HTH domain LJC78_13085 PF02092 Glycyl-tRNA synthetase beta subunit LJC78_13090 PF02091 Glycyl-tRNA synthetase alpha subunit LJC78_13095 PF11967 Recombination protein O N terminal LJC78_13095 PF02565 Recombination protein O C terminal LJC78_13100 PF14006 YqzL-like protein LJC78_13105 PF01926 50S ribosome-binding GTPase LJC78_13105 PF07650 KH domain LJC78_13110 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region LJC78_13115 PF01219 Prokaryotic diacylglycerol kinase LJC78_13120 PF02130 Uncharacterized protein family UPF0054 LJC78_13125 PF07698 7TM receptor with intracellular HD hydrolase LJC78_13125 PF07697 7TM-HD extracellular LJC78_13125 PF01966 HD domain LJC78_13130 PF02562 PhoH-like protein LJC78_13135 PF06898 Putative stage IV sporulation protein YqfD LJC78_13140 PF07873 YabP family LJC78_13150 PF12127 SigmaW regulon antibacterial LJC78_13155 PF01957 NfeD-like C-terminal, partner-binding LJC78_13155 PF01972 Serine dehydrogenase proteinase LJC78_13160 PF09424 Yqey-like protein LJC78_13165 PF01165 Ribosomal protein S21 LJC78_13170 PF02690 Na+/Pi-cotransporter LJC78_13175 PF04055 Radical SAM superfamily LJC78_13175 PF01938 TRAM domain LJC78_13175 PF00919 Uncharacterized protein family UPF0004 LJC78_13180 PF04452 RNA methyltransferase LJC78_13190 PF00226 DnaJ domain LJC78_13190 PF01556 DnaJ C terminal domain LJC78_13190 PF00684 DnaJ central domain LJC78_13195 PF00012 Hsp70 protein LJC78_13200 PF01025 GrpE LJC78_13205 PF01628 HrcA protein C terminal domain LJC78_13210 PF06969 HemN C-terminal domain LJC78_13210 PF04055 Radical SAM superfamily LJC78_13215 PF00679 Elongation factor G C-terminus LJC78_13215 PF00009 Elongation factor Tu GTP binding domain LJC78_13215 PF03144 Elongation factor Tu domain 2 LJC78_13215 PF06421 GTP-binding protein LepA C-terminus LJC78_13220 PF12438 Protein of unknown function (DUF3679) LJC78_13225 PF07454 Stage II sporulation protein P (SpoIIP) LJC78_13230 PF03418 Germination protease LJC78_13235 PF01649 Ribosomal protein S20 LJC78_13240 PF06144 DNA polymerase III, delta subunit LJC78_13250 PF14141 YqzM-like protein LJC78_13255 PF03772 Competence protein LJC78_13255 PF13567 Domain of unknown function (DUF4131) LJC78_13255 PF00753 Metallo-beta-lactamase superfamily LJC78_13260 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region LJC78_13265 PF10531 SLBB domain LJC78_13270 PF14748 Pyrroline-5-carboxylate reductase dimerisation LJC78_13270 PF03807 NADP oxidoreductase coenzyme F420-dependent LJC78_13275 PF13649 Methyltransferase domain LJC78_13285 PF01966 HD domain LJC78_13290 PF01467 Cytidylyltransferase-like LJC78_13295 PF01985 CRS1 / YhbY (CRM) domain LJC78_13300 PF18317 Shikimate 5'-dehydrogenase C-terminal domain LJC78_13300 PF01488 Shikimate / quinate 5-dehydrogenase LJC78_13300 PF08501 Shikimate dehydrogenase substrate binding domain LJC78_13305 PF01926 50S ribosome-binding GTPase LJC78_13315 PF08970 Sporulation inhibitor A LJC78_13320 PF00657 GDSL-like Lipase/Acylhydrolase LJC78_13325 PF01471 Putative peptidoglycan binding domain LJC78_13325 PF01510 N-acetylmuramoyl-L-alanine amidase LJC78_13330 PF09335 SNARE associated Golgi protein LJC78_13335 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain LJC78_13335 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase LJC78_13350 PF14040 Deoxyribonuclease NucA/NucB LJC78_13355 PF04542 Sigma-70 region 2 LJC78_13355 PF04545 Sigma-70, region 4 LJC78_13370 PF10415 Fumarase C C-terminus LJC78_13370 PF00206 Lyase LJC78_13375 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LJC78_13375 PF03466 LysR substrate binding domain LJC78_13390 PF18801 response regulator aspartate phosphatase H, N terminal LJC78_13390 PF13176 Tetratricopeptide repeat LJC78_13445 PF18593 CdiI immunity protein LJC78_13450 PF00665 Integrase core domain LJC78_13455 PF01695 IstB-like ATP binding protein LJC78_13500 PF17356 Phage-like element PBSX protein XtrA LJC78_13525 PF06445 GyrI-like small molecule binding domain LJC78_13525 PF13411 MerR HTH family regulatory protein LJC78_13530 PF07690 Major Facilitator Superfamily LJC78_13535 PF00583 Acetyltransferase (GNAT) family LJC78_13540 PF00571 CBS domain LJC78_13540 PF03471 Transporter associated domain LJC78_13540 PF01595 Cyclin M transmembrane N-terminal domain LJC78_13545 PF14142 YrzO-like protein LJC78_13550 PF00892 EamA-like transporter family LJC78_13555 PF03466 LysR substrate binding domain LJC78_13555 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LJC78_13565 PF16916 Dimerisation domain of Zinc Transporter LJC78_13565 PF01545 Cation efflux family LJC78_13580 PF05525 Branched-chain amino acid transport protein LJC78_13585 PF05437 Branched-chain amino acid transport protein (AzlD) LJC78_13595 PF01037 Lrp/AsnC ligand binding domain LJC78_13600 PF01337 Barstar (barnase inhibitor) LJC78_13605 PF00067 Cytochrome P450 LJC78_13615 PF00857 Isochorismatase family LJC78_13620 PF10823 Protein of unknown function (DUF2568) LJC78_13635 PF05163 DinB family LJC78_13640 PF04439 Streptomycin adenylyltransferase LJC78_13645 PF03060 Nitronate monooxygenase LJC78_13650 PF01177 Asp/Glu/Hydantoin racemase LJC78_13655 PF15493 Domain of unknown function, YrpD LJC78_13660 PF09680 Family of unknown function LJC78_13670 PF09223 ZinT (YodA) periplasmic lipocalin-like zinc-recruitment LJC78_13675 PF08281 Sigma-70, region 4 LJC78_13675 PF04542 Sigma-70 region 2 LJC78_13680 PF00248 Aldo/keto reductase family LJC78_13685 PF01374 Glycosyl hydrolase family 46 LJC78_13695 PF00561 alpha/beta hydrolase fold LJC78_13715 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily LJC78_13725 PF07875 Coat F domain LJC78_13730 PF08240 Alcohol dehydrogenase GroES-like domain LJC78_13730 PF13823 Alcohol dehydrogenase GroES-associated LJC78_13730 PF00107 Zinc-binding dehydrogenase LJC78_13740 PF07875 Coat F domain LJC78_13745 PF13411 MerR HTH family regulatory protein LJC78_13755 PF08240 Alcohol dehydrogenase GroES-like domain LJC78_13755 PF00107 Zinc-binding dehydrogenase LJC78_13760 PF01965 DJ-1/PfpI family LJC78_13765 PF08244 Glycosyl hydrolases family 32 C terminal LJC78_13765 PF00251 Glycosyl hydrolases family 32 N-terminal domain LJC78_13770 PF03613 PTS system mannose/fructose/sorbose family IID component LJC78_13775 PF03609 PTS system sorbose-specific iic component LJC78_13780 PF03830 PTS system sorbose subfamily IIB component LJC78_13785 PF03610 PTS system fructose IIA component LJC78_13790 PF03610 PTS system fructose IIA component LJC78_13790 PF00874 PRD domain LJC78_13790 PF00158 Sigma-54 interaction domain LJC78_13800 PF00324 Amino acid permease LJC78_13805 PF01810 LysE type translocator LJC78_13810 PF01978 Sugar-specific transcriptional regulator TrmB LJC78_13810 PF11495 Archaeal transcriptional regulator TrmB LJC78_13815 PF04542 Sigma-70 region 2 LJC78_13815 PF08281 Sigma-70, region 4 LJC78_13820 PF11738 Protein of unknown function (DUF3298) LJC78_13820 PF13739 Deacetylase PdaC LJC78_13830 PF14145 YrhK-like protein LJC78_13840 PF16295 Tetracyclin repressor-like, C-terminal domain LJC78_13840 PF00440 Bacterial regulatory proteins, tetR family LJC78_13845 PF08241 Methyltransferase domain LJC78_13855 PF09501 Probable sporulation protein (Bac_small_yrzI) LJC78_13860 PF01226 Formate/nitrite transporter LJC78_13865 PF10057 Uncharacterized conserved protein (DUF2294) LJC78_13870 PF04879 Molybdopterin oxidoreductase Fe4S4 domain LJC78_13870 PF00384 Molybdopterin oxidoreductase LJC78_13870 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region LJC78_13870 PF01568 Molydopterin dinucleotide binding domain LJC78_13870 PF00037 4Fe-4S binding domain LJC78_13875 PF07849 Protein of unknown function (DUF1641) LJC78_13885 PF14143 YrhC-like protein LJC78_13890 PF01053 Cys/Met metabolism PLP-dependent enzyme LJC78_13895 PF00291 Pyridoxal-phosphate dependent enzyme LJC78_13900 PF01048 Phosphorylase superfamily LJC78_13905 PF13649 Methyltransferase domain LJC78_13910 PF10750 Protein of unknown function (DUF2536) LJC78_13915 PF07423 Domain of unknown function (DUF1510) LJC78_13920 PF03717 Penicillin-binding Protein dimerisation domain LJC78_13920 PF00905 Penicillin binding protein transpeptidase domain LJC78_13925 PF01272 Transcription elongation factor, GreA/GreB, C-term LJC78_13925 PF03449 Transcription elongation factor, N-terminal LJC78_13930 PF00485 Phosphoribulokinase / Uridine kinase family LJC78_13935 PF16325 Peptidase family U32 C-terminal domain LJC78_13935 PF01136 Peptidase family U32 LJC78_13940 PF01136 Peptidase family U32 LJC78_13945 PF01596 O-methyltransferase LJC78_13950 PF02618 YceG-like family LJC78_13955 PF06949 Protein of unknown function (DUF1292) LJC78_13960 PF03652 Holliday junction resolvase LJC78_13965 PF06135 IreB regulatory phosphoprotein LJC78_13970 PF02272 DHHA1 domain LJC78_13970 PF01411 tRNA synthetases class II (A) LJC78_13970 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain LJC78_13975 PF01594 AI-2E family transporter LJC78_13980 PF00005 ABC transporter LJC78_13985 PF00497 Bacterial extracellular solute-binding proteins, family 3 LJC78_13990 PF00528 Binding-protein-dependent transport system inner membrane component LJC78_13995 PF00528 Binding-protein-dependent transport system inner membrane component LJC78_14000 PF13056 Protein of unknown function (DUF3918) LJC78_14010 PF05239 PRC-barrel domain LJC78_14015 PF14490 Helix-hairpin-helix containing domain LJC78_14015 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain LJC78_14015 PF13538 UvrD-like helicase C-terminal domain LJC78_14020 PF07719 Tetratricopeptide repeat LJC78_14020 PF13181 Tetratricopeptide repeat LJC78_14030 PF00266 Aminotransferase class-V LJC78_14035 PF02082 Transcriptional regulator LJC78_14040 PF16193 AAA C-terminal domain LJC78_14040 PF12002 MgsA AAA+ ATPase C terminal LJC78_14040 PF05496 Holliday junction DNA helicase RuvB P-loop domain LJC78_14045 PF00899 ThiF family LJC78_14055 PF02938 GAD domain LJC78_14055 PF00152 tRNA synthetases class II (D, K and N) LJC78_14055 PF01336 OB-fold nucleic acid binding domain LJC78_14060 PF03129 Anticodon binding domain LJC78_14060 PF13393 Histidyl-tRNA synthetase LJC78_14065 PF17449 Uncharacterized YrzK-like LJC78_14070 PF01520 N-acetylmuramoyl-L-alanine amidase LJC78_14070 PF08239 Bacterial SH3 domain LJC78_14075 PF02580 D-Tyr-tRNA(Tyr) deacylase LJC78_14080 PF13291 ACT domain LJC78_14080 PF02824 TGS domain LJC78_14080 PF04607 Region found in RelA / SpoT proteins LJC78_14085 PF00156 Phosphoribosyl transferase domain LJC78_14090 PF02272 DHHA1 domain LJC78_14090 PF17768 RecJ OB domain LJC78_14090 PF10141 Single-strand DNA-specific exonuclease, C terminal domain LJC78_14090 PF01368 DHH family LJC78_14095 PF06305 Lipopolysaccharide assembly protein A domain LJC78_14100 PF02080 TrkA-C domain LJC78_14105 PF07549 SecD/SecF GG Motif LJC78_14105 PF02355 Protein export membrane protein LJC78_14110 PF13797 Post-transcriptional regulator LJC78_14115 PF14667 Polysaccharide biosynthesis C-terminal domain LJC78_14115 PF01943 Polysaccharide biosynthesis protein LJC78_14120 PF04239 Protein of unknown function (DUF421) LJC78_14125 PF12670 Protein of unknown function (DUF3792) LJC78_14130 PF02699 Preprotein translocase subunit LJC78_14135 PF01702 Queuine tRNA-ribosyltransferase LJC78_14140 PF02547 Queuosine biosynthesis protein LJC78_14145 PF11146 Protein of unknown function (DUF2905) LJC78_14150 PF17864 RuvB AAA lid domain LJC78_14150 PF05491 RuvB C-terminal winged helix domain LJC78_14150 PF05496 Holliday junction DNA helicase RuvB P-loop domain LJC78_14155 PF07499 RuvA, C-terminal domain LJC78_14155 PF01330 RuvA N terminal domain LJC78_14160 PF08955 BofC C-terminal domain LJC78_14160 PF08977 Bypass of Forespore C, N terminal LJC78_14165 PF07690 Major Facilitator Superfamily LJC78_14170 PF02894 Oxidoreductase family, C-terminal alpha/beta domain LJC78_14170 PF01408 Oxidoreductase family, NAD-binding Rossmann fold LJC78_14195 PF01235 Sodium:alanine symporter family LJC78_14200 PF01709 Transcriptional regulator LJC78_14205 PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) LJC78_14210 PF01476 LysM domain LJC78_14215 PF02445 Quinolinate synthetase A protein LJC78_14220 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain LJC78_14220 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain LJC78_14225 PF00890 FAD binding domain LJC78_14225 PF02910 Fumarate reductase flavoprotein C-term LJC78_14230 PF00266 Aminotransferase class-V LJC78_14235 PF02829 3H domain LJC78_14235 PF08279 HTH domain LJC78_14240 PF01842 ACT domain LJC78_14240 PF00800 Prephenate dehydratase LJC78_14245 PF01842 ACT domain LJC78_14250 PF09269 Domain of unknown function (DUF1967) LJC78_14250 PF01018 GTP1/OBG LJC78_14250 PF01926 50S ribosome-binding GTPase LJC78_14255 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain LJC78_14255 PF14682 Sporulation initiation phospho-transferase B, C-terminal LJC78_14265 PF01016 Ribosomal L27 protein LJC78_14270 PF04327 Cysteine protease Prp LJC78_14275 PF00829 Ribosomal prokaryotic L21 protein LJC78_14280 PF02163 Peptidase family M50 LJC78_14285 PF01551 Peptidase family M23 LJC78_14290 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain LJC78_14295 PF03775 Septum formation inhibitor MinC, C-terminal domain LJC78_14300 PF04093 rod shape-determining protein MreD LJC78_14305 PF04085 rod shape-determining protein MreC LJC78_14315 PF00633 Helix-hairpin-helix motif LJC78_14315 PF04002 RadC-like JAB domain LJC78_14320 PF02545 Maf-like protein LJC78_14325 PF05036 Sporulation related domain LJC78_14330 PF06750 Bacterial Peptidase A24 N-terminal domain LJC78_14330 PF01478 Type IV leader peptidase family LJC78_14335 PF02875 Mur ligase family, glutamate ligase domain LJC78_14335 PF08245 Mur ligase middle domain LJC78_14340 PF00133 tRNA synthetases class I (I, L, M and V) LJC78_14340 PF10458 Valyl tRNA synthetase tRNA binding arm LJC78_14340 PF08264 Anticodon-binding domain of tRNA LJC78_14355 PF01476 LysM domain LJC78_14360 PF00202 Aminotransferase class-III LJC78_14365 PF00490 Delta-aminolevulinic acid dehydratase LJC78_14370 PF02602 Uroporphyrinogen-III synthase HemD LJC78_14375 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain LJC78_14375 PF03900 Porphobilinogen deaminase, C-terminal domain LJC78_14380 PF01578 Cytochrome C assembly protein LJC78_14385 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain LJC78_14385 PF01488 Shikimate / quinate 5-dehydrogenase LJC78_14385 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain LJC78_14395 PF01926 50S ribosome-binding GTPase LJC78_14400 PF02190 ATP-dependent protease La (LON) substrate-binding domain LJC78_14400 PF00004 ATPase family associated with various cellular activities (AAA) LJC78_14400 PF05362 Lon protease (S16) C-terminal proteolytic domain LJC78_14405 PF00004 ATPase family associated with various cellular activities (AAA) LJC78_14405 PF05362 Lon protease (S16) C-terminal proteolytic domain LJC78_14410 PF07724 AAA domain (Cdc48 subfamily) LJC78_14410 PF10431 C-terminal, D2-small domain, of ClpB protein LJC78_14410 PF06689 ClpX C4-type zinc finger LJC78_14415 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase LJC78_14415 PF05698 Bacterial trigger factor protein (TF) C-terminus LJC78_14415 PF05697 Bacterial trigger factor protein (TF) LJC78_14425 PF00694 Aconitase C-terminal domain LJC78_14430 PF00330 Aconitase family (aconitate hydratase) LJC78_14435 PF00180 Isocitrate/isopropylmalate dehydrogenase LJC78_14440 PF08502 LeuA allosteric (dimerisation) domain LJC78_14440 PF00682 HMGL-like LJC78_14445 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain LJC78_14445 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain LJC78_14450 PF01842 ACT domain LJC78_14450 PF10369 Small subunit of acetolactate synthase LJC78_14455 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain LJC78_14455 PF00205 Thiamine pyrophosphate enzyme, central domain LJC78_14455 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain LJC78_14470 PF09557 Domain of unknown function (DUF2382) LJC78_14470 PF11181 Heat induced stress protein YflT LJC78_14485 PF01420 Type I restriction modification DNA specificity domain LJC78_14490 PF02384 N-6 DNA Methylase LJC78_14495 PF08463 EcoEI R protein C-terminal LJC78_14495 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) LJC78_14495 PF04851 Type III restriction enzyme, res subunit LJC78_14495 PF00271 Helicase conserved C-terminal domain LJC78_14515 PF02899 Phage integrase, N-terminal SAM-like domain LJC78_14515 PF00589 Phage integrase family LJC78_14525 PF12850 Calcineurin-like phosphoesterase superfamily domain LJC78_14530 PF01725 Ham1 family LJC78_14535 PF01138 3' exoribonuclease family, domain 1 LJC78_14535 PF03725 3' exoribonuclease family, domain 2 LJC78_14540 PF10646 Sporulation and spore germination LJC78_14545 PF01177 Asp/Glu/Hydantoin racemase LJC78_14550 PF01047 MarR family LJC78_14555 PF00196 Bacterial regulatory proteins, luxR family LJC78_14560 PF03061 Thioesterase superfamily LJC78_14565 PF13085 2Fe-2S iron-sulfur cluster binding domain LJC78_14565 PF13183 4Fe-4S dicluster domain LJC78_14570 PF02910 Fumarate reductase flavoprotein C-term LJC78_14570 PF00890 FAD binding domain LJC78_14575 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit LJC78_14580 PF10702 Protein of unknown function (DUF2507) LJC78_14585 PF00696 Amino acid kinase family LJC78_14585 PF01842 ACT domain LJC78_14585 PF13840 ACT domain LJC78_14590 PF01541 GIY-YIG catalytic domain LJC78_14590 PF02151 UvrB/uvrC motif LJC78_14590 PF08459 UvrC Helix-hairpin-helix N-terminal LJC78_14595 PF00085 Thioredoxin LJC78_14600 PF06964 Alpha-L-arabinofuranosidase C-terminal domain LJC78_14605 PF01012 Electron transfer flavoprotein domain LJC78_14605 PF00766 Electron transfer flavoprotein FAD-binding domain LJC78_14610 PF01012 Electron transfer flavoprotein domain LJC78_14615 PF00378 Enoyl-CoA hydratase/isomerase LJC78_14620 PF00440 Bacterial regulatory proteins, tetR family LJC78_14620 PF08359 YsiA-like protein, C-terminal region LJC78_14625 PF00501 AMP-binding enzyme LJC78_14625 PF13193 AMP-binding enzyme C-terminal domain LJC78_14630 PF03994 Domain of Unknown Function (DUF350) LJC78_14635 PF01713 Smr domain LJC78_14635 PF00488 MutS domain V LJC78_14640 PF14716 Helix-hairpin-helix domain LJC78_14640 PF14791 DNA polymerase beta thumb LJC78_14640 PF02811 PHP domain LJC78_14645 PF02674 Colicin V production protein LJC78_14650 PF05164 Cell division protein ZapA LJC78_14655 PF01351 Ribonuclease HII LJC78_14655 PF11858 Domain of unknown function (DUF3378) LJC78_14660 PF03484 tRNA synthetase B5 domain LJC78_14660 PF03147 Ferredoxin-fold anticodon binding domain LJC78_14660 PF01588 Putative tRNA binding domain LJC78_14660 PF03483 B3/4 domain LJC78_14660 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain LJC78_14665 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain LJC78_14665 PF01409 tRNA synthetases class II core domain (F) LJC78_14675 PF00588 SpoU rRNA Methylase family LJC78_14675 PF08032 RNA 2'-O ribose methyltransferase substrate binding LJC78_14680 PF14098 Small, acid-soluble spore protein I LJC78_14685 PF05651 Putative sugar diacid recognition LJC78_14685 PF17853 GGDEF-like domain LJC78_14685 PF13556 PucR C-terminal helix-turn-helix domain LJC78_14690 PF02913 FAD linked oxidases, C-terminal domain LJC78_14690 PF01565 FAD binding domain LJC78_14695 PF02754 Cysteine-rich domain LJC78_14695 PF13183 4Fe-4S dicluster domain LJC78_14700 PF12681 Glyoxalase-like domain LJC78_14710 PF02554 Carbon starvation protein CstA LJC78_14710 PF13722 5TM C-terminal transporter carbon starvation CstA LJC78_14715 PF06964 Alpha-L-arabinofuranosidase C-terminal domain LJC78_14720 PF00528 Binding-protein-dependent transport system inner membrane component LJC78_14725 PF00528 Binding-protein-dependent transport system inner membrane component LJC78_14730 PF01547 Bacterial extracellular solute-binding protein LJC78_14735 PF13685 Iron-containing alcohol dehydrogenase LJC78_14740 PF13344 Haloacid dehalogenase-like hydrolase LJC78_14745 PF00596 Class II Aldolase and Adducin N-terminal domain LJC78_14750 PF02782 FGGY family of carbohydrate kinases, C-terminal domain LJC78_14750 PF00370 FGGY family of carbohydrate kinases, N-terminal domain LJC78_14755 PF02610 L-arabinose isomerase LJC78_14755 PF11762 L-arabinose isomerase C-terminal domain LJC78_14765 PF05343 M42 glutamyl aminopeptidase LJC78_14775 PF06961 Protein of unknown function (DUF1294) LJC78_14780 PF00453 Ribosomal protein L20 LJC78_14785 PF01632 Ribosomal protein L35 LJC78_14790 PF05198 Translation initiation factor IF-3, N-terminal domain LJC78_14790 PF00707 Translation initiation factor IF-3, C-terminal domain LJC78_14800 PF04172 LrgB-like family LJC78_14805 PF03788 LrgA family LJC78_14810 PF04397 LytTr DNA-binding domain LJC78_14810 PF00072 Response regulator receiver domain LJC78_14815 PF06580 Histidine kinase LJC78_14815 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LJC78_14815 PF07694 5TMR of 5TMR-LYT LJC78_14820 PF13419 Haloacid dehalogenase-like hydrolase LJC78_14825 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain LJC78_14825 PF02824 TGS domain LJC78_14825 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) LJC78_14825 PF03129 Anticodon binding domain LJC78_14830 PF08812 YtxC-like family LJC78_14835 PF09335 SNARE associated Golgi protein LJC78_14840 PF07319 Primosomal protein DnaI N-terminus LJC78_14840 PF01695 IstB-like ATP binding protein LJC78_14845 PF07261 Replication initiation and membrane attachment LJC78_14850 PF03477 ATP cone domain LJC78_14855 PF02675 S-adenosylmethionine decarboxylase LJC78_14860 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain LJC78_14860 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain LJC78_14865 PF01638 HxlR-like helix-turn-helix LJC78_14870 PF07690 Major Facilitator Superfamily LJC78_14875 PF00248 Aldo/keto reductase family LJC78_14880 PF01121 Dephospho-CoA kinase LJC78_14885 PF02659 Putative manganese efflux pump LJC78_14890 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain LJC78_14890 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain LJC78_14890 PF06827 Zinc finger found in FPG and IleRS LJC78_14895 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain LJC78_14895 PF00476 DNA polymerase family A LJC78_14895 PF01367 5'-3' exonuclease, C-terminal SAM fold LJC78_14900 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LJC78_14900 PF00512 His Kinase A (phospho-acceptor) domain LJC78_14900 PF00989 PAS fold LJC78_14900 PF16736 Single Cache-like LJC78_14905 PF00072 Response regulator receiver domain LJC78_14905 PF00486 Transcriptional regulatory protein, C terminal LJC78_14910 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain LJC78_14910 PF00056 lactate/malate dehydrogenase, NAD binding domain LJC78_14915 PF00180 Isocitrate/isopropylmalate dehydrogenase LJC78_14920 PF00285 Citrate synthase, C-terminal domain LJC78_14925 PF04284 Protein of unknown function (DUF441) LJC78_14930 PF01594 AI-2E family transporter LJC78_14935 PF04186 FxsA cytoplasmic membrane protein LJC78_14940 PF00224 Pyruvate kinase, barrel domain LJC78_14940 PF00391 PEP-utilising enzyme, mobile domain LJC78_14940 PF02887 Pyruvate kinase, alpha/beta domain LJC78_14945 PF00365 Phosphofructokinase LJC78_14950 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit LJC78_14955 PF01039 Carboxyl transferase domain LJC78_14955 PF17848 Acetyl-coA carboxylase zinc finger domain LJC78_14960 PF00390 Malic enzyme, N-terminal domain LJC78_14960 PF03949 Malic enzyme, NAD binding domain LJC78_14965 PF07733 Bacterial DNA polymerase III alpha NTPase domain LJC78_14965 PF17657 Bacterial DNA polymerase III alpha subunit finger domain LJC78_14965 PF14579 Helix-hairpin-helix motif LJC78_14965 PF02811 PHP domain LJC78_14965 PF01336 OB-fold nucleic acid binding domain LJC78_14970 PF14034 Sporulation protein YtrH LJC78_14985 PF01368 DHH family LJC78_14985 PF02272 DHHA1 domain LJC78_14990 PF14007 YtpI-like protein LJC78_14995 PF03061 Thioesterase superfamily LJC78_14995 PF00571 CBS domain LJC78_14995 PF07085 DRTGG domain LJC78_14995 PF00392 Bacterial regulatory proteins, gntR family LJC78_15020 PF14698 Argininosuccinate lyase C-terminal LJC78_15020 PF00206 Lyase LJC78_15025 PF00764 Arginosuccinate synthase LJC78_15030 PF00994 Probable molybdopterin binding domain LJC78_15035 PF00871 Acetokinase family LJC78_15045 PF02384 N-6 DNA Methylase LJC78_15050 PF08534 Redoxin LJC78_15055 PF09579 Sporulation protein YtfJ (Spore_YtfJ) LJC78_15060 PF11167 Protein of unknown function (DUF2953) LJC78_15065 PF06271 RDD family LJC78_15070 PF01343 Peptidase family S49 LJC78_15075 PF01513 ATP-NAD kinase LJC78_15080 PF07969 Amidohydrolase family LJC78_15085 PF13193 AMP-binding enzyme C-terminal domain LJC78_15085 PF00501 AMP-binding enzyme LJC78_15090 PF00269 Small, acid-soluble spore proteins, alpha/beta type LJC78_15095 PF02568 Thiamine biosynthesis protein (ThiI) LJC78_15095 PF02926 THUMP domain LJC78_15100 PF00266 Aminotransferase class-V LJC78_15105 PF05525 Branched-chain amino acid transport protein LJC78_15110 PF06160 Septation ring formation regulator, EzrA LJC78_15115 PF02811 PHP domain LJC78_15120 PF00440 Bacterial regulatory proteins, tetR family LJC78_15125 PF13185 GAF domain LJC78_15130 PF00990 Diguanylate cyclase, GGDEF domain LJC78_15135 PF00163 Ribosomal protein S4/S9 N-terminal domain LJC78_15135 PF01479 S4 domain LJC78_15140 PF01479 S4 domain LJC78_15140 PF00579 tRNA synthetases class I (W and Y) LJC78_15145 PF00501 AMP-binding enzyme LJC78_15145 PF13193 AMP-binding enzyme C-terminal domain LJC78_15150 PF00583 Acetyltransferase (GNAT) family LJC78_15155 PF00571 CBS domain LJC78_15160 PF00850 Histone deacetylase domain LJC78_15165 PF13677 Membrane MotB of proton-channel complex MotA/MotB LJC78_15165 PF00691 OmpA family LJC78_15170 PF01618 MotA/TolQ/ExbB proton channel family LJC78_15175 PF00356 Bacterial regulatory proteins, lacI family LJC78_15180 PF01817 Chorismate mutase type II LJC78_15180 PF00793 DAHP synthetase I family LJC78_15185 PF11009 Protein of unknown function (DUF2847) LJC78_15190 PF12732 YtxH-like protein LJC78_15195 PF06103 Bacterial protein of unknown function (DUF948) LJC78_15200 PF01225 Mur ligase family, catalytic domain LJC78_15200 PF02875 Mur ligase family, glutamate ligase domain LJC78_15200 PF08245 Mur ligase middle domain LJC78_15205 PF17854 FtsK alpha domain LJC78_15205 PF09397 Ftsk gamma domain LJC78_15205 PF01580 FtsK/SpoIIIE family LJC78_15210 PF01588 Putative tRNA binding domain LJC78_15210 PF14794 Domain of unknown function (DUF4479) LJC78_15215 PF07285 Protein of unknown function (DUF1444) LJC78_15220 PF00085 Thioredoxin LJC78_15230 PF11071 Nucleoside 2-deoxyribosyltransferase YtoQ LJC78_15235 PF05343 M42 glutamyl aminopeptidase LJC78_15240 PF03413 Peptidase propeptide and YPEB domain LJC78_15245 PF03949 Malic enzyme, NAD binding domain LJC78_15245 PF00390 Malic enzyme, N-terminal domain LJC78_15250 PF00753 Metallo-beta-lactamase superfamily LJC78_15255 PF02390 Putative methyltransferase LJC78_15260 PF14165 YtzH-like protein LJC78_15265 PF01636 Phosphotransferase enzyme family LJC78_15270 PF00128 Alpha amylase, catalytic domain LJC78_15270 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) LJC78_15270 PF17999 Pullulanase N1-terminal domain LJC78_15275 PF00781 Diacylglycerol kinase catalytic domain LJC78_15290 PF00291 Pyridoxal-phosphate dependent enzyme LJC78_15295 PF01546 Peptidase family M20/M25/M40 LJC78_15300 PF00860 Permease family LJC78_15305 PF05975 Bacterial ABC transporter protein EcsB LJC78_15310 PF00005 ABC transporter LJC78_15315 PF08220 DeoR-like helix-turn-helix domain LJC78_15320 PF00849 RNA pseudouridylate synthase LJC78_15320 PF01479 S4 domain LJC78_15325 PF14667 Polysaccharide biosynthesis C-terminal domain LJC78_15325 PF01943 Polysaccharide biosynthesis protein LJC78_15335 PF02028 BCCT, betaine/carnitine/choline family transporter LJC78_15340 PF10957 Sporulation protein Cse60 LJC78_15360 PF07470 Glycosyl Hydrolase Family 88 LJC78_15365 PF00528 Binding-protein-dependent transport system inner membrane component LJC78_15375 PF13416 Bacterial extracellular solute-binding protein LJC78_15380 PF00528 Binding-protein-dependent transport system inner membrane component LJC78_15385 PF01370 NAD dependent epimerase/dehydratase family LJC78_15390 PF00067 Cytochrome P450 LJC78_15395 PF06968 Biotin and Thiamin Synthesis associated domain LJC78_15395 PF04055 Radical SAM superfamily LJC78_15405 PF00155 Aminotransferase class I and II LJC78_15410 PF00202 Aminotransferase class-III LJC78_15420 PF01738 Dienelactone hydrolase family LJC78_15425 PF00356 Bacterial regulatory proteins, lacI family LJC78_15430 PF01547 Bacterial extracellular solute-binding protein LJC78_15435 PF00528 Binding-protein-dependent transport system inner membrane component LJC78_15440 PF00528 Binding-protein-dependent transport system inner membrane component LJC78_15445 PF11975 Family 4 glycosyl hydrolase C-terminal domain LJC78_15445 PF02056 Family 4 glycosyl hydrolase LJC78_15450 PF00581 Rhodanese-like domain LJC78_15455 PF00133 tRNA synthetases class I (I, L, M and V) LJC78_15455 PF13603 Leucyl-tRNA synthetase, Domain 2 LJC78_15455 PF08264 Anticodon-binding domain of tRNA LJC78_15455 PF09334 tRNA synthetases class I (M) LJC78_15460 PF14074 Protein of unknown function (DUF4257) LJC78_15465 PF13426 PAS domain LJC78_15465 PF01740 STAS domain LJC78_15470 PF07690 Major Facilitator Superfamily LJC78_15475 PF04791 LMBR1-like membrane protein LJC78_15480 PF02687 FtsX-like permease family LJC78_15485 PF00005 ABC transporter LJC78_15490 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LJC78_15495 PF00072 Response regulator receiver domain LJC78_15495 PF00486 Transcriptional regulatory protein, C terminal LJC78_15500 PF02687 FtsX-like permease family LJC78_15500 PF12704 MacB-like periplasmic core domain LJC78_15505 PF00005 ABC transporter LJC78_15520 PF00005 ABC transporter LJC78_15525 PF00392 Bacterial regulatory proteins, gntR family LJC78_15535 PF10732 Protein of unknown function (DUF2524) LJC78_15540 PF04055 Radical SAM superfamily LJC78_15540 PF16199 Radical_SAM C-terminal domain LJC78_15545 PF06962 Putative rRNA methylase LJC78_15550 PF10776 Protein of unknown function (DUF2600) LJC78_15555 PF12146 Serine aminopeptidase, S33 LJC78_15560 PF00132 Bacterial transferase hexapeptide (six repeats) LJC78_15565 PF00324 Amino acid permease LJC78_15570 PF00733 Asparagine synthase LJC78_15570 PF13537 Glutamine amidotransferase domain LJC78_15575 PF00438 S-adenosylmethionine synthetase, N-terminal domain LJC78_15575 PF02773 S-adenosylmethionine synthetase, C-terminal domain LJC78_15575 PF02772 S-adenosylmethionine synthetase, central domain LJC78_15580 PF01293 Phosphoenolpyruvate carboxykinase LJC78_15585 PF10763 Protein of unknown function (DUF2584) LJC78_15590 PF00326 Prolyl oligopeptidase family LJC78_15600 PF00005 ABC transporter LJC78_15605 PF00528 Binding-protein-dependent transport system inner membrane component LJC78_15610 PF00293 NUDIX domain LJC78_15615 PF05105 Bacteriophage holin family LJC78_15620 PF00210 Ferritin-like domain LJC78_15630 PF13115 YtkA-like LJC78_15635 PF02664 S-Ribosylhomocysteinase (LuxS) LJC78_15640 PF01809 Putative membrane protein insertion efficiency factor LJC78_15645 PF00484 Carbonic anhydrase LJC78_15650 PF01197 Ribosomal protein L31 LJC78_15655 PF01654 Cytochrome bd terminal oxidase subunit I LJC78_15660 PF02322 Cytochrome bd terminal oxidase subunit II LJC78_15665 PF07561 Domain of Unknown Function (DUF1540) LJC78_15670 PF00950 ABC 3 transport family LJC78_15675 PF00950 ABC 3 transport family LJC78_15680 PF00005 ABC transporter LJC78_15685 PF01297 Zinc-uptake complex component A periplasmic LJC78_15690 PF13378 Enolase C-terminal domain-like LJC78_15690 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain LJC78_15695 PF00501 AMP-binding enzyme LJC78_15695 PF13193 AMP-binding enzyme C-terminal domain LJC78_15700 PF00378 Enoyl-CoA hydratase/isomerase LJC78_15705 PF00561 alpha/beta hydrolase fold LJC78_15710 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain LJC78_15710 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain LJC78_15710 PF16582 Middle domain of thiamine pyrophosphate LJC78_15715 PF00425 chorismate binding enzyme LJC78_15720 PF01258 Prokaryotic dksA/traR C4-type zinc finger LJC78_15725 PF00483 Nucleotidyl transferase LJC78_15730 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain LJC78_15730 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain LJC78_15730 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain LJC78_15735 PF01370 NAD dependent epimerase/dehydratase family LJC78_15740 PF13439 Glycosyltransferase Family 4 LJC78_15740 PF00534 Glycosyl transferases group 1 LJC78_15755 PF13439 Glycosyltransferase Family 4 LJC78_15755 PF00534 Glycosyl transferases group 1 LJC78_15760 PF01636 Phosphotransferase enzyme family LJC78_15765 PF03073 TspO/MBR family LJC78_15770 PF00343 Carbohydrate phosphorylase LJC78_15775 PF00534 Glycosyl transferases group 1 LJC78_15775 PF08323 Starch synthase catalytic domain LJC78_15780 PF00483 Nucleotidyl transferase LJC78_15785 PF00483 Nucleotidyl transferase LJC78_15790 PF00128 Alpha amylase, catalytic domain LJC78_15790 PF02806 Alpha amylase, C-terminal all-beta domain LJC78_15790 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) LJC78_15915 PF09515 Thiamine transporter protein (Thia_YuaJ) LJC78_15920 PF00583 Acetyltransferase (GNAT) family LJC78_15925 PF15975 Flotillin LJC78_15925 PF01145 SPFH domain / Band 7 family LJC78_15935 PF12867 DinB superfamily LJC78_15945 PF00465 Iron-containing alcohol dehydrogenase LJC78_15950 PF00171 Aldehyde dehydrogenase family LJC78_15960 PF17735 Biofilm surface layer A LJC78_15965 PF02080 TrkA-C domain LJC78_15965 PF02254 TrkA-N domain LJC78_15970 PF02386 Cation transport protein LJC78_15975 PF05360 yiaA/B two helix domain LJC78_15980 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase LJC78_15980 PF13457 GW (Gly-Tryp) dipeptide domain LJC78_15985 PF07690 Major Facilitator Superfamily LJC78_15990 PF05995 Cysteine dioxygenase type I LJC78_16000 PF02673 Bacitracin resistance protein BacA LJC78_16005 PF01594 AI-2E family transporter LJC78_16010 PF02894 Oxidoreductase family, C-terminal alpha/beta domain LJC78_16010 PF01408 Oxidoreductase family, NAD-binding Rossmann fold LJC78_16015 PF06134 L-rhamnose isomerase (RhaA) LJC78_16020 PF05336 L-rhamnose mutarotase LJC78_16025 PF02782 FGGY family of carbohydrate kinases, C-terminal domain LJC78_16025 PF00370 FGGY family of carbohydrate kinases, N-terminal domain LJC78_16030 PF00455 DeoR C terminal sensor domain LJC78_16030 PF08220 DeoR-like helix-turn-helix domain LJC78_16035 PF00596 Class II Aldolase and Adducin N-terminal domain LJC78_16045 PF02743 Cache domain LJC78_16045 PF00672 HAMP domain LJC78_16045 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LJC78_16055 PF02743 Cache domain LJC78_16055 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LJC78_16055 PF00672 HAMP domain LJC78_16070 PF01894 Uncharacterised protein family UPF0047 LJC78_16080 PF00128 Alpha amylase, catalytic domain LJC78_16080 PF16657 Maltogenic Amylase, C-terminal domain LJC78_16085 PF00571 CBS domain LJC78_16085 PF03471 Transporter associated domain LJC78_16085 PF01595 Cyclin M transmembrane N-terminal domain LJC78_16090 PF04298 Putative neutral zinc metallopeptidase LJC78_16100 PF11458 Membrane-integrating protein Mistic LJC78_16105 PF02254 TrkA-N domain LJC78_16105 PF07885 Ion channel LJC78_16110 PF08868 YugN-like family LJC78_16120 PF00342 Phosphoglucose isomerase LJC78_16125 PF00465 Iron-containing alcohol dehydrogenase LJC78_16130 PF00465 Iron-containing alcohol dehydrogenase LJC78_16135 PF04070 Domain of unknown function (DUF378) LJC78_16140 PF00575 S1 RNA binding domain LJC78_16145 PF00155 Aminotransferase class I and II LJC78_16150 PF01037 Lrp/AsnC ligand binding domain LJC78_16155 PF00561 alpha/beta hydrolase fold LJC78_16155 PF08386 TAP-like protein LJC78_16160 PF08958 Domain of unknown function (DUF1871) LJC78_16165 PF00155 Aminotransferase class I and II LJC78_16170 PF00512 His Kinase A (phospho-acceptor) domain LJC78_16170 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LJC78_16175 PF08810 Kinase associated protein B LJC78_16180 PF00929 Exonuclease LJC78_16190 PF07690 Major Facilitator Superfamily LJC78_16195 PF00905 Penicillin binding protein transpeptidase domain LJC78_16195 PF00912 Transglycosylase LJC78_16200 PF04134 Protein of unknown function, DUF393 LJC78_16205 PF17328 Family of unknown function (DUF5366) LJC78_16210 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain LJC78_16210 PF17203 Single cache domain 3 LJC78_16210 PF00989 PAS fold LJC78_16210 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LJC78_16215 PF00072 Response regulator receiver domain LJC78_16220 PF02608 ABC transporter substrate-binding protein PnrA-like LJC78_16225 PF00005 ABC transporter LJC78_16230 PF02653 Branched-chain amino acid transport system / permease component LJC78_16235 PF02653 Branched-chain amino acid transport system / permease component LJC78_16240 PF03390 2-hydroxycarboxylate transporter family LJC78_16250 PF13244 Domain of unknown function (DUF4040) LJC78_16250 PF00361 Proton-conducting membrane transporter LJC78_16250 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus LJC78_16255 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter LJC78_16260 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L LJC78_16265 PF00361 Proton-conducting membrane transporter LJC78_16270 PF01899 Na+/H+ ion antiporter subunit LJC78_16275 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) LJC78_16280 PF03334 Na+/H+ antiporter subunit LJC78_16285 PF03061 Thioesterase superfamily LJC78_16290 PF00072 Response regulator receiver domain LJC78_16290 PF00196 Bacterial regulatory proteins, luxR family LJC78_16295 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LJC78_16295 PF07730 Histidine kinase LJC78_16305 PF00348 Polyprenyl synthetase LJC78_16310 PF08181 DegQ (SacQ) family LJC78_16325 PF00563 EAL domain LJC78_16325 PF08668 HDOD domain LJC78_16330 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family LJC78_16330 PF17956 Nicotinate phosphoribosyltransferase C-terminal domain LJC78_16330 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain LJC78_16335 PF00857 Isochorismatase family LJC78_16340 PF07997 Protein of unknown function (DUF1694) LJC78_16345 PF14166 YueH-like protein LJC78_16350 PF10676 Spore germination protein gerPA/gerPF LJC78_16355 PF01594 AI-2E family transporter LJC78_16360 PF10049 Protein of unknown function (DUF2283) LJC78_16370 PF01966 HD domain LJC78_16375 PF00106 short chain dehydrogenase LJC78_16380 PF17355 Family of unknown function (DUF5383) LJC78_16390 PF01580 FtsK/SpoIIIE family LJC78_16390 PF12538 DNA transporter LJC78_16395 PF10140 WXG100 protein secretion system (Wss), protein YukC LJC78_16400 PF08817 WXG100 protein secretion system (Wss), protein YukD LJC78_16405 PF06013 Proteins of 100 residues with WXG LJC78_16410 PF06018 CodY GAF-like domain LJC78_16410 PF13556 PucR C-terminal helix-turn-helix domain LJC78_16410 PF17853 GGDEF-like domain LJC78_16415 PF01262 Alanine dehydrogenase/PNT, C-terminal domain LJC78_16415 PF05222 Alanine dehydrogenase/PNT, N-terminal domain LJC78_16420 PF10042 Uncharacterized conserved protein (DUF2278) LJC78_16425 PF03621 MbtH-like protein LJC78_16430 PF13193 AMP-binding enzyme C-terminal domain LJC78_16430 PF00668 Condensation domain LJC78_16430 PF00550 Phosphopantetheine attachment site LJC78_16430 PF00975 Thioesterase domain LJC78_16430 PF00501 AMP-binding enzyme LJC78_16435 PF00857 Isochorismatase family LJC78_16435 PF00550 Phosphopantetheine attachment site LJC78_16440 PF00501 AMP-binding enzyme LJC78_16440 PF13193 AMP-binding enzyme C-terminal domain LJC78_16445 PF00425 chorismate binding enzyme LJC78_16450 PF00106 short chain dehydrogenase LJC78_16455 PF00756 Putative esterase LJC78_16460 PF00174 Oxidoreductase molybdopterin binding domain LJC78_16465 PF02632 BioY family LJC78_16470 PF13726 Na+-H+ antiporter family LJC78_16470 PF03553 Na+/H+ antiporter family LJC78_16475 PF00883 Cytosol aminopeptidase family, catalytic domain LJC78_16475 PF02789 Cytosol aminopeptidase family, N-terminal domain LJC78_16480 PF02681 Divergent PAP2 family LJC78_16485 PF06725 3D domain LJC78_16490 PF14068 Putative membrane protein LJC78_16495 PF17302 Family of unknown function (DUF5351) LJC78_16500 PF07992 Pyridine nucleotide-disulphide oxidoreductase LJC78_16505 PF07992 Pyridine nucleotide-disulphide oxidoreductase LJC78_16515 PF00478 IMP dehydrogenase / GMP reductase domain LJC78_16520 PF04299 Putative FMN-binding domain LJC78_16525 PF00583 Acetyltransferase (GNAT) family LJC78_16650 PF00589 Phage integrase family LJC78_16660 PF02899 Phage integrase, N-terminal SAM-like domain LJC78_16660 PF00589 Phage integrase family LJC78_16665 PF01521 Iron-sulphur cluster biosynthesis LJC78_16670 PF01678 Diaminopimelate epimerase LJC78_16675 PF07662 Na+ dependent nucleoside transporter C-terminus LJC78_16675 PF01773 Na+ dependent nucleoside transporter N-terminus LJC78_16680 PF07293 Protein of unknown function (DUF1450) LJC78_16685 PF07992 Pyridine nucleotide-disulphide oxidoreductase LJC78_16690 PF07315 Protein of unknown function (DUF1462) LJC78_16695 PF01106 NifU-like domain LJC78_16700 PF07676 WD40-like Beta Propeller Repeat LJC78_16700 PF00326 Prolyl oligopeptidase family LJC78_16705 PF00288 GHMP kinases N terminal domain LJC78_16705 PF08544 GHMP kinases C terminal LJC78_16710 PF00291 Pyridoxal-phosphate dependent enzyme LJC78_16715 PF01842 ACT domain LJC78_16715 PF03447 Homoserine dehydrogenase, NAD binding domain LJC78_16715 PF00742 Homoserine dehydrogenase LJC78_16725 PF04608 Phosphatidylglycerophosphatase A LJC78_16730 PF13344 Haloacid dehalogenase-like hydrolase LJC78_16735 PF01934 Protein of unknown function DUF86 LJC78_16740 PF06265 Protein of unknown function (DUF1027) LJC78_16745 PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) LJC78_16750 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family LJC78_16750 PF04055 Radical SAM superfamily LJC78_16755 PF01551 Peptidase family M23 LJC78_16760 PF09560 Sporulation protein YunB (Spo_YunB) LJC78_16765 PF08827 Domain of unknown function (DUF1805) LJC78_16770 PF02872 5'-nucleotidase, C-terminal domain LJC78_16775 PF01925 Sulfite exporter TauE/SafE LJC78_16780 PF01904 Protein of unknown function DUF72 LJC78_16790 PF01979 Amidohydrolase family LJC78_16795 PF17853 GGDEF-like domain LJC78_16795 PF07905 Purine catabolism regulatory protein-like family LJC78_16795 PF13556 PucR C-terminal helix-turn-helix domain LJC78_16800 PF00860 Permease family LJC78_16805 PF00860 Permease family LJC78_16810 PF09349 OHCU decarboxylase LJC78_16810 PF01014 Uricase LJC78_16815 PF00576 HIUase/Transthyretin family LJC78_16820 PF09680 Family of unknown function LJC78_16825 PF00111 2Fe-2S iron-sulfur cluster binding domain LJC78_16825 PF01799 [2Fe-2S] binding domain LJC78_16830 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase LJC78_16830 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain LJC78_16835 PF00941 FAD binding domain in molybdopterin dehydrogenase LJC78_16840 PF12804 MobA-like NTP transferase domain LJC78_16845 PF02625 XdhC and CoxI family LJC78_16845 PF13478 XdhC Rossmann domain LJC78_16850 PF00266 Aminotransferase class-V LJC78_16855 PF01546 Peptidase family M20/M25/M40 LJC78_16865 PF04231 Endonuclease I LJC78_16870 PF17912 MalK OB fold domain LJC78_16870 PF00005 ABC transporter LJC78_16870 PF03459 TOBE domain LJC78_16875 PF00392 Bacterial regulatory proteins, gntR family LJC78_16875 PF07702 UTRA domain LJC78_16880 PF00294 pfkB family carbohydrate kinase LJC78_16890 PF00528 Binding-protein-dependent transport system inner membrane component LJC78_16895 PF01547 Bacterial extracellular solute-binding protein LJC78_16900 PF01380 SIS domain LJC78_16905 PF01541 GIY-YIG catalytic domain LJC78_16910 PF01266 FAD dependent oxidoreductase LJC78_16925 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily LJC78_16935 PF01458 Uncharacterized protein family (UPF0051) LJC78_16940 PF01592 NifU-like N terminal domain LJC78_16945 PF00266 Aminotransferase class-V LJC78_16950 PF01458 Uncharacterized protein family (UPF0051) LJC78_16955 PF00005 ABC transporter LJC78_16970 PF03180 NLPA lipoprotein LJC78_16975 PF00528 Binding-protein-dependent transport system inner membrane component LJC78_16980 PF00005 ABC transporter LJC78_16980 PF09383 NIL domain LJC78_16985 PF02036 SCP-2 sterol transfer family LJC78_16990 PF00085 Thioredoxin LJC78_16995 PF01751 Toprim domain LJC78_17000 PF10830 Protein of unknown function (DUF2553) LJC78_17005 PF01597 Glycine cleavage H-protein LJC78_17010 PF03960 ArsC family LJC78_17015 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LJC78_17015 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LJC78_17015 PF02770 Acyl-CoA dehydrogenase, middle domain LJC78_17020 PF02803 Thiolase, C-terminal domain LJC78_17020 PF00108 Thiolase, N-terminal domain LJC78_17025 PF00378 Enoyl-CoA hydratase/isomerase LJC78_17025 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain LJC78_17025 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain LJC78_17030 PF14115 YuzL-like protein LJC78_17035 PF01619 Proline dehydrogenase LJC78_17045 PF07875 Coat F domain LJC78_17050 PF01047 MarR family LJC78_17055 PF07690 Major Facilitator Superfamily LJC78_17060 PF14552 Tautomerase enzyme LJC78_17070 PF03466 LysR substrate binding domain LJC78_17070 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LJC78_17080 PF00005 ABC transporter LJC78_17085 PF14039 YusW-like protein LJC78_17100 PF00005 ABC transporter LJC78_17135 PF00155 Aminotransferase class I and II LJC78_17145 PF00210 Ferritin-like domain LJC78_17150 PF13180 PDZ domain LJC78_17155 PF00486 Transcriptional regulatory protein, C terminal LJC78_17155 PF00072 Response regulator receiver domain LJC78_17160 PF00512 His Kinase A (phospho-acceptor) domain LJC78_17160 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LJC78_17160 PF00672 HAMP domain LJC78_17170 PF00440 Bacterial regulatory proteins, tetR family LJC78_17175 PF10415 Fumarase C C-terminus LJC78_17175 PF00206 Lyase LJC78_17180 PF13113 Protein of unknown function (DUF3970) LJC78_17185 PF03323 Bacillus/Clostridium GerA spore germination protein LJC78_17190 PF03845 Spore germination protein LJC78_17195 PF05504 Spore germination B3/ GerAC like, C-terminal LJC78_17200 PF00196 Bacterial regulatory proteins, luxR family LJC78_17200 PF00072 Response regulator receiver domain LJC78_17205 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LJC78_17205 PF00672 HAMP domain LJC78_17205 PF07730 Histidine kinase LJC78_17210 PF09922 Cell wall-active antibiotics response 4TMS YvqF LJC78_17215 PF13349 Putative adhesin LJC78_17220 PF04012 PspA/IM30 family LJC78_17230 PF07690 Major Facilitator Superfamily LJC78_17235 PF01923 Cobalamin adenosyltransferase LJC78_17240 PF00005 ABC transporter LJC78_17245 PF01032 FecCD transport family LJC78_17250 PF01497 Periplasmic binding protein LJC78_17255 PF00106 short chain dehydrogenase LJC78_17260 PF08450 SMP-30/Gluconolactonase/LRE-like region LJC78_17265 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LJC78_17265 PF00512 His Kinase A (phospho-acceptor) domain LJC78_17270 PF00072 Response regulator receiver domain LJC78_17270 PF00486 Transcriptional regulatory protein, C terminal LJC78_17285 PF12841 YvrJ protein family LJC78_17290 PF00190 Cupin LJC78_17295 PF14184 Regulatory protein YrvL LJC78_17300 PF02687 FtsX-like permease family LJC78_17300 PF12704 MacB-like periplasmic core domain LJC78_17305 PF00005 ABC transporter LJC78_17310 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion LJC78_17315 PF00005 ABC transporter LJC78_17320 PF01032 FecCD transport family LJC78_17325 PF01032 FecCD transport family LJC78_17330 PF01497 Periplasmic binding protein LJC78_17335 PF13520 Amino acid permease LJC78_17340 PF09575 Small spore protein J (Spore_SspJ) LJC78_17345 PF04307 LexA-binding, inner membrane-associated putative hydrolase LJC78_17350 PF00884 Sulfatase LJC78_17355 PF12727 PBP superfamily domain LJC78_17355 PF12728 Helix-turn-helix domain LJC78_17365 PF00528 Binding-protein-dependent transport system inner membrane component LJC78_17370 PF00248 Aldo/keto reductase family LJC78_17380 PF00999 Sodium/hydrogen exchanger family LJC78_17385 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain LJC78_17385 PF01077 Nitrite and sulphite reductase 4Fe-4S domain LJC78_17390 PF00258 Flavodoxin LJC78_17390 PF00667 FAD binding domain LJC78_17390 PF00175 Oxidoreductase NAD-binding domain LJC78_17395 PF13538 UvrD-like helicase C-terminal domain LJC78_17405 PF03458 UPF0126 domain LJC78_17410 PF02600 Disulfide bond formation protein DsbB LJC78_17415 PF13462 Thioredoxin LJC78_17420 PF00403 Heavy-metal-associated domain LJC78_17425 PF00403 Heavy-metal-associated domain LJC78_17430 PF00403 Heavy-metal-associated domain LJC78_17435 PF02583 Metal-sensitive transcriptional repressor LJC78_17440 PF01408 Oxidoreductase family, NAD-binding Rossmann fold LJC78_17440 PF02894 Oxidoreductase family, C-terminal alpha/beta domain LJC78_17460 PF00893 Small Multidrug Resistance protein LJC78_17465 PF00440 Bacterial regulatory proteins, tetR family LJC78_17470 PF00106 short chain dehydrogenase LJC78_17480 PF04740 LXG domain of WXG superfamily LJC78_17480 PF14410 HNH/ENDO VII superfamily nuclease with conserved GHE residues LJC78_17480 PF14449 Pre-toxin TG LJC78_17495 PF01476 LysM domain LJC78_17495 PF01510 N-acetylmuramoyl-L-alanine amidase LJC78_17495 PF01471 Putative peptidoglycan binding domain LJC78_17500 PF05105 Bacteriophage holin family LJC78_17525 PF05257 CHAP domain LJC78_17525 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase LJC78_17655 PF09643 YopX protein LJC78_17690 PF17356 Phage-like element PBSX protein XtrA LJC78_17765 PF01668 SmpB protein LJC78_17770 PF17876 Cold shock domain LJC78_17770 PF08206 Ribonuclease B OB domain LJC78_17770 PF00575 S1 RNA binding domain LJC78_17770 PF00773 RNB domain LJC78_17775 PF12146 Serine aminopeptidase, S33 LJC78_17780 PF03840 Preprotein translocase SecG subunit LJC78_17785 PF00561 alpha/beta hydrolase fold LJC78_17790 PF01381 Helix-turn-helix LJC78_17805 PF01638 HxlR-like helix-turn-helix LJC78_17810 PF12729 Four helix bundle sensory module for signal transduction LJC78_17810 PF00672 HAMP domain LJC78_17810 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LJC78_17815 PF00528 Binding-protein-dependent transport system inner membrane component LJC78_17820 PF04069 Substrate binding domain of ABC-type glycine betaine transport system LJC78_17825 PF00528 Binding-protein-dependent transport system inner membrane component LJC78_17830 PF00571 CBS domain LJC78_17830 PF00005 ABC transporter LJC78_17835 PF12802 MarR family LJC78_17840 PF00528 Binding-protein-dependent transport system inner membrane component LJC78_17845 PF04069 Substrate binding domain of ABC-type glycine betaine transport system LJC78_17850 PF00528 Binding-protein-dependent transport system inner membrane component LJC78_17855 PF00005 ABC transporter LJC78_17855 PF00571 CBS domain LJC78_17860 PF12802 MarR family LJC78_17865 PF01914 MarC family integral membrane protein LJC78_17870 PF08000 Bacterial PH domain LJC78_17870 PF11724 YvbH-like oligomerisation region LJC78_17880 PF13240 zinc-ribbon domain LJC78_17885 PF00583 Acetyltransferase (GNAT) family LJC78_17890 PF00113 Enolase, C-terminal TIM barrel domain LJC78_17890 PF03952 Enolase, N-terminal domain LJC78_17895 PF06415 BPG-independent PGAM N-terminus (iPGM_N) LJC78_17895 PF01676 Metalloenzyme superfamily LJC78_17900 PF00121 Triosephosphate isomerase LJC78_17905 PF00162 Phosphoglycerate kinase LJC78_17910 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain LJC78_17910 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain LJC78_17915 PF04198 Putative sugar-binding domain LJC78_17920 PF00083 Sugar (and other) transporter LJC78_17925 PF00392 Bacterial regulatory proteins, gntR family LJC78_17930 PF00296 Luciferase-like monooxygenase LJC78_17935 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LJC78_17935 PF03466 LysR substrate binding domain LJC78_17940 PF00892 EamA-like transporter family LJC78_17945 PF00324 Amino acid permease LJC78_17955 PF02589 LUD domain LJC78_17960 PF13183 4Fe-4S dicluster domain LJC78_17960 PF02589 LUD domain LJC78_17960 PF11870 Domain of unknown function (DUF3390) LJC78_17965 PF02754 Cysteine-rich domain LJC78_17970 PF00072 Response regulator receiver domain LJC78_17970 PF00196 Bacterial regulatory proteins, luxR family LJC78_17975 PF07730 Histidine kinase LJC78_17975 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LJC78_17985 PF00005 ABC transporter LJC78_18005 PF12697 Alpha/beta hydrolase family LJC78_18010 PF13426 PAS domain LJC78_18010 PF07228 Stage II sporulation protein E (SpoIIE) LJC78_18015 PF07745 Glycosyl hydrolase family 53 LJC78_18020 PF08532 Beta-galactosidase trimerisation domain LJC78_18020 PF08533 Beta-galactosidase C-terminal domain LJC78_18020 PF02449 Beta-galactosidase LJC78_18025 PF00528 Binding-protein-dependent transport system inner membrane component LJC78_18030 PF00528 Binding-protein-dependent transport system inner membrane component LJC78_18035 PF13416 Bacterial extracellular solute-binding protein LJC78_18040 PF00356 Bacterial regulatory proteins, lacI family LJC78_18045 PF00392 Bacterial regulatory proteins, gntR family LJC78_18045 PF07729 FCD domain LJC78_18050 PF02652 L-lactate permease LJC78_18055 PF00309 Sigma-54 factor, Activator interacting domain (AID) LJC78_18055 PF04552 Sigma-54, DNA binding domain LJC78_18055 PF04963 Sigma-54 factor, core binding domain LJC78_18060 PF09628 YvfG protein LJC78_18065 PF04230 Polysaccharide pyruvyl transferase LJC78_18070 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family LJC78_18075 PF00132 Bacterial transferase hexapeptide (six repeats) LJC78_18075 PF17836 PglD N-terminal domain LJC78_18080 PF02397 Bacterial sugar transferase LJC78_18085 PF14667 Polysaccharide biosynthesis C-terminal domain LJC78_18085 PF01943 Polysaccharide biosynthesis protein LJC78_18090 PF00535 Glycosyl transferase family 2 LJC78_18095 PF04230 Polysaccharide pyruvyl transferase LJC78_18100 PF00535 Glycosyl transferase family 2 LJC78_18110 PF00534 Glycosyl transferases group 1 LJC78_18110 PF13439 Glycosyltransferase Family 4 LJC78_18115 PF00535 Glycosyl transferase family 2 LJC78_18120 PF00534 Glycosyl transferases group 1 LJC78_18120 PF13439 Glycosyltransferase Family 4 LJC78_18125 PF02719 Polysaccharide biosynthesis protein LJC78_18130 PF13614 AAA domain LJC78_18135 PF02706 Chain length determinant protein LJC78_18140 PF01381 Helix-turn-helix LJC78_18140 PF08671 Anti-repressor SinI LJC78_18145 PF00135 Carboxylesterase family LJC78_18155 PF05870 Phenolic acid decarboxylase (PAD) LJC78_18165 PF01177 Asp/Glu/Hydantoin racemase LJC78_18175 PF02435 Levansucrase/Invertase LJC78_18180 PF00251 Glycosyl hydrolases family 32 N-terminal domain LJC78_18180 PF08244 Glycosyl hydrolases family 32 C terminal LJC78_18185 PF13520 Amino acid permease LJC78_18190 PF17934 Tetracyclin repressor-like, C-terminal domain LJC78_18190 PF00440 Bacterial regulatory proteins, tetR family LJC78_18195 PF00893 Small Multidrug Resistance protein LJC78_18200 PF00893 Small Multidrug Resistance protein LJC78_18220 PF01580 FtsK/SpoIIIE family LJC78_18240 PF01510 N-acetylmuramoyl-L-alanine amidase LJC78_18240 PF01476 LysM domain LJC78_18240 PF01471 Putative peptidoglycan binding domain LJC78_18245 PF10960 BhlA holin family LJC78_18275 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase LJC78_18275 PF13457 GW (Gly-Tryp) dipeptide domain LJC78_18355 PF00589 Phage integrase family LJC78_18470 PF02899 Phage integrase, N-terminal SAM-like domain LJC78_18470 PF00589 Phage integrase family LJC78_18480 PF00574 Clp protease LJC78_18485 PF13419 Haloacid dehalogenase-like hydrolase LJC78_18490 PF16657 Maltogenic Amylase, C-terminal domain LJC78_18490 PF00128 Alpha amylase, catalytic domain LJC78_18495 PF03636 Glycosyl hydrolase family 65, N-terminal domain LJC78_18495 PF03632 Glycosyl hydrolase family 65 central catalytic domain LJC78_18495 PF03633 Glycosyl hydrolase family 65, C-terminal domain LJC78_18500 PF06691 Protein of unknown function (DUF1189) LJC78_18505 PF00528 Binding-protein-dependent transport system inner membrane component LJC78_18510 PF00528 Binding-protein-dependent transport system inner membrane component LJC78_18515 PF13416 Bacterial extracellular solute-binding protein LJC78_18520 PF02903 Alpha amylase, N-terminal ig-like domain LJC78_18520 PF00128 Alpha amylase, catalytic domain LJC78_18525 PF00356 Bacterial regulatory proteins, lacI family LJC78_18530 PF03641 Possible lysine decarboxylase LJC78_18540 PF01740 STAS domain LJC78_18540 PF00916 Sulfate permease family LJC78_18545 PF00484 Carbonic anhydrase LJC78_18550 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain LJC78_18550 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain LJC78_18555 PF02687 FtsX-like permease family LJC78_18560 PF00005 ABC transporter LJC78_18565 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LJC78_18570 PF00072 Response regulator receiver domain LJC78_18570 PF00486 Transcriptional regulatory protein, C terminal LJC78_18580 PF00797 N-acetyltransferase LJC78_18585 PF00381 PTS HPr component phosphorylation site LJC78_18590 PF10298 WhiA N-terminal LAGLIDADG-like domain LJC78_18590 PF14527 WhiA LAGLIDADG-like domain LJC78_18590 PF02650 WhiA C-terminal HTH domain LJC78_18595 PF01933 Uncharacterised protein family UPF0052 LJC78_18600 PF03668 P-loop ATPase protein family LJC78_18605 PF00293 NUDIX domain LJC78_18610 PF07992 Pyridine nucleotide-disulphide oxidoreductase LJC78_18615 PF00877 NlpC/P60 family LJC78_18625 PF00005 ABC transporter LJC78_18625 PF00664 ABC transporter transmembrane region LJC78_18645 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase LJC78_18645 PF01502 Phosphoribosyl-AMP cyclohydrolase LJC78_18650 PF00977 Histidine biosynthesis protein LJC78_18655 PF00977 Histidine biosynthesis protein LJC78_18660 PF00117 Glutamine amidotransferase class-I LJC78_18665 PF00475 Imidazoleglycerol-phosphate dehydratase LJC78_18670 PF00815 Histidinol dehydrogenase LJC78_18675 PF01634 ATP phosphoribosyltransferase LJC78_18680 PF13393 Histidyl-tRNA synthetase LJC78_18685 PF13529 Peptidase_C39 like family LJC78_18690 PF03211 Pectate lyase LJC78_18705 PF13419 Haloacid dehalogenase-like hydrolase LJC78_18710 PF07670 Nucleoside recognition LJC78_18715 PF01790 Prolipoprotein diacylglyceryl transferase LJC78_18720 PF07475 HPr Serine kinase C-terminal domain LJC78_18720 PF02603 HPr Serine kinase N terminus LJC78_18725 PF01979 Amidohydrolase family LJC78_18730 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase LJC78_18735 PF07702 UTRA domain LJC78_18735 PF00392 Bacterial regulatory proteins, gntR family LJC78_18740 PF00149 Calcineurin-like phosphoesterase LJC78_18755 PF04020 Mycobacterial 4 TMS phage holin, superfamily IV LJC78_18760 PF04024 PspC domain LJC78_18765 PF13349 Putative adhesin LJC78_18780 PF00669 Bacterial flagellin N-terminal helical region LJC78_18780 PF00700 Bacterial flagellin C-terminal helical region LJC78_18785 PF00005 ABC transporter LJC78_18785 PF17760 UvrA interaction domain LJC78_18785 PF17755 UvrA DNA-binding domain LJC78_18790 PF02151 UvrB/uvrC motif LJC78_18790 PF12344 Ultra-violet resistance protein B LJC78_18790 PF17757 UvrB interaction domain LJC78_18790 PF04851 Type III restriction enzyme, res subunit LJC78_18790 PF00271 Helicase conserved C-terminal domain LJC78_18795 PF09964 Uncharacterized protein conserved in bacteria (DUF2198) LJC78_18800 PF00391 PEP-utilising enzyme, mobile domain LJC78_18800 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain LJC78_18805 PF00440 Bacterial regulatory proteins, tetR family LJC78_18810 PF07690 Major Facilitator Superfamily LJC78_18815 PF17820 PDZ domain LJC78_18820 PF17423 Swarming motility protein LJC78_18825 PF17820 PDZ domain LJC78_18825 PF03572 Peptidase family S41 LJC78_18825 PF01471 Putative peptidoglycan binding domain LJC78_18830 PF02687 FtsX-like permease family LJC78_18830 PF18075 FtsX extracellular domain LJC78_18835 PF00005 ABC transporter LJC78_18840 PF13442 Cytochrome C oxidase, cbb3-type, subunit III LJC78_18845 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) LJC78_18845 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 LJC78_18855 PF01043 SecA preprotein cross-linking domain LJC78_18855 PF07517 SecA DEAD-like domain LJC78_18855 PF02810 SEC-C motif LJC78_18855 PF07516 SecA Wing and Scaffold domain LJC78_18860 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein LJC78_18860 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus LJC78_18875 PF02561 Flagellar protein FliS LJC78_18880 PF07196 Flagellin hook IN motif LJC78_18880 PF07195 Flagellar hook-associated protein 2 C-terminus LJC78_18880 PF02465 Flagellar hook-associated protein 2 N-terminus LJC78_18885 PF03646 FlaG protein LJC78_18890 PF00700 Bacterial flagellin C-terminal helical region LJC78_18890 PF00669 Bacterial flagellin N-terminal helical region LJC78_18895 PF02599 Global regulator protein family LJC78_18900 PF02623 FliW protein LJC78_18910 PF00669 Bacterial flagellin N-terminal helical region LJC78_18910 PF00700 Bacterial flagellin C-terminal helical region LJC78_18915 PF06429 Flagellar basal body rod FlgEFG protein C-terminal LJC78_18915 PF00460 Flagella basal body rod protein LJC78_18920 PF05130 FlgN protein LJC78_18925 PF04316 Anti-sigma-28 factor, FlgM LJC78_18940 PF10719 Late competence development protein ComFB LJC78_18945 PF00271 Helicase conserved C-terminal domain LJC78_18945 PF04851 Type III restriction enzyme, res subunit LJC78_18950 PF02645 Uncharacterised protein, DegV family COG1307 LJC78_18955 PF00072 Response regulator receiver domain LJC78_18955 PF00196 Bacterial regulatory proteins, luxR family LJC78_18960 PF07730 Histidine kinase LJC78_18960 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LJC78_18960 PF05384 Sensor protein DegS LJC78_18965 PF09186 Domain of unknown function (DUF1949) LJC78_18965 PF01205 Uncharacterized protein family UPF0029 LJC78_19000 PF00005 ABC transporter LJC78_19010 PF00953 Glycosyl transferase family 4 LJC78_19020 PF00535 Glycosyl transferase family 2 LJC78_19025 PF02706 Chain length determinant protein LJC78_19030 PF04932 O-Antigen ligase LJC78_19035 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain LJC78_19035 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain LJC78_19035 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain LJC78_19040 PF00534 Glycosyl transferases group 1 LJC78_19040 PF13439 Glycosyltransferase Family 4 LJC78_19045 PF01943 Polysaccharide biosynthesis protein LJC78_19045 PF14667 Polysaccharide biosynthesis C-terminal domain LJC78_19050 PF02397 Bacterial sugar transferase LJC78_19055 PF01609 Transposase DDE domain LJC78_19060 PF01520 N-acetylmuramoyl-L-alanine amidase LJC78_19060 PF04122 Putative cell wall binding repeat 2 LJC78_19065 PF04122 Putative cell wall binding repeat 2 LJC78_19065 PF08486 Stage II sporulation protein LJC78_19095 PF02350 UDP-N-acetylglucosamine 2-epimerase LJC78_19100 PF00483 Nucleotidyl transferase LJC78_19115 PF01061 ABC-2 type transporter LJC78_19125 PF00535 Glycosyl transferase family 2 LJC78_19125 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase LJC78_19130 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase LJC78_19135 PF01467 Cytidylyltransferase-like LJC78_19140 PF03808 Glycosyl transferase WecB/TagA/CpsF family LJC78_19145 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase LJC78_19150 PF05036 Sporulation related domain LJC78_19150 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase LJC78_19150 PF08239 Bacterial SH3 domain LJC78_19155 PF01238 Phosphomannose isomerase type I LJC78_19160 PF03323 Bacillus/Clostridium GerA spore germination protein LJC78_19165 PF03845 Spore germination protein LJC78_19170 PF05504 Spore germination B3/ GerAC like, C-terminal LJC78_19180 PF03816 Cell envelope-related transcriptional attenuator domain LJC78_19190 PF00877 NlpC/P60 family LJC78_19200 PF09587 Bacterial capsule synthesis protein PGA_cap LJC78_19205 PF14102 Capsule biosynthesis CapC LJC78_19210 PF08245 Mur ligase middle domain LJC78_19215 PF00356 Bacterial regulatory proteins, lacI family LJC78_19220 PF00294 pfkB family carbohydrate kinase LJC78_19225 PF05025 RbsD / FucU transport protein family LJC78_19230 PF00005 ABC transporter LJC78_19235 PF02653 Branched-chain amino acid transport system / permease component LJC78_19240 PF13407 Periplasmic binding protein domain LJC78_19245 PF08239 Bacterial SH3 domain LJC78_19250 PF13031 Protein of unknown function (DUF3892) LJC78_19255 PF02525 Flavodoxin-like fold LJC78_19260 PF03306 Alpha-acetolactate decarboxylase LJC78_19265 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain LJC78_19265 PF00205 Thiamine pyrophosphate enzyme, central domain LJC78_19265 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain LJC78_19270 PF03466 LysR substrate binding domain LJC78_19270 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LJC78_19275 PF02040 Arsenical pump membrane protein LJC78_19290 PF08757 CotH kinase protein LJC78_19300 PF01613 Flavin reductase like domain LJC78_19305 PF13789 Domain of unknown function (DUF4181) LJC78_19315 PF01037 Lrp/AsnC ligand binding domain LJC78_19315 PF13404 AsnC-type helix-turn-helix domain LJC78_19320 PF02417 Chromate transporter LJC78_19325 PF02417 Chromate transporter LJC78_19335 PF03358 NADPH-dependent FMN reductase LJC78_19340 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LJC78_19340 PF03466 LysR substrate binding domain LJC78_19385 PF16888 Domain of unknown function (DUF5082) LJC78_19400 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain LJC78_19400 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain LJC78_19400 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain LJC78_19410 PF13614 AAA domain LJC78_19415 PF02706 Chain length determinant protein LJC78_19415 PF13807 G-rich domain on putative tyrosine kinase LJC78_19425 PF04434 SWIM zinc finger LJC78_19430 PF12419 SNF2 Helicase protein LJC78_19430 PF00176 SNF2 family N-terminal domain LJC78_19430 PF00271 Helicase conserved C-terminal domain LJC78_19440 PF00455 DeoR C terminal sensor domain LJC78_19440 PF08220 DeoR-like helix-turn-helix domain LJC78_19445 PF00436 Single-strand binding protein family LJC78_19455 PF14183 YwpF-like protein LJC78_19470 PF06580 Histidine kinase LJC78_19470 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LJC78_19475 PF01741 Large-conductance mechanosensitive channel, MscL LJC78_19480 PF07977 FabA-like domain LJC78_19485 PF18801 response regulator aspartate phosphatase H, N terminal LJC78_19490 PF06429 Flagellar basal body rod FlgEFG protein C-terminal LJC78_19490 PF00460 Flagella basal body rod protein LJC78_19495 PF06429 Flagellar basal body rod FlgEFG protein C-terminal LJC78_19495 PF00460 Flagella basal body rod protein LJC78_19505 PF12116 Stage III sporulation protein D LJC78_19515 PF01047 MarR family LJC78_19520 PF07690 Major Facilitator Superfamily LJC78_19525 PF13229 Right handed beta helix region LJC78_19530 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin LJC78_19535 PF07690 Major Facilitator Superfamily LJC78_19540 PF00857 Isochorismatase family LJC78_19550 PF00909 Ammonium Transporter Family LJC78_19555 PF00543 Nitrogen regulatory protein P-II LJC78_19560 PF01569 PAP2 superfamily LJC78_19565 PF04892 VanZ like family LJC78_19570 PF01551 Peptidase family M23 LJC78_19575 PF00583 Acetyltransferase (GNAT) family LJC78_19580 PF17319 Family of unknown function (DUF5362) LJC78_19585 PF03102 NeuB family LJC78_19585 PF08666 SAF domain LJC78_19590 PF17370 Family of unknown function (DUF5392) LJC78_19595 PF13396 Phospholipase_D-nuclease N-terminal LJC78_19595 PF13091 PLD-like domain LJC78_19600 PF07739 TipAS antibiotic-recognition domain LJC78_19600 PF13411 MerR HTH family regulatory protein LJC78_19605 PF17319 Family of unknown function (DUF5362) LJC78_19610 PF13460 NAD(P)H-binding LJC78_19615 PF02082 Transcriptional regulator LJC78_19620 PF01979 Amidohydrolase family LJC78_19620 PF00449 Urease alpha-subunit, N-terminal domain LJC78_19625 PF00699 Urease beta subunit LJC78_19630 PF00547 Urease, gamma subunit LJC78_19645 PF05532 CsbD-like LJC78_19655 PF18801 response regulator aspartate phosphatase H, N terminal LJC78_19655 PF17874 MalT-like TPR region LJC78_19660 PF06463 Molybdenum Cofactor Synthesis C LJC78_19660 PF04055 Radical SAM superfamily LJC78_19665 PF02634 FdhD/NarQ family LJC78_19675 PF00092 von Willebrand factor type A domain LJC78_19685 PF00092 von Willebrand factor type A domain LJC78_19690 PF08486 Stage II sporulation protein LJC78_19695 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) LJC78_19700 PF08680 TATA-box binding LJC78_19705 PF06612 Protein of unknown function (DUF1146) LJC78_19715 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain LJC78_19715 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain LJC78_19720 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain LJC78_19720 PF02874 ATP synthase alpha/beta family, beta-barrel domain LJC78_19725 PF00231 ATP synthase LJC78_19730 PF02874 ATP synthase alpha/beta family, beta-barrel domain LJC78_19730 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain LJC78_19730 PF00306 ATP synthase alpha/beta chain, C terminal domain LJC78_19735 PF00213 ATP synthase delta (OSCP) subunit LJC78_19740 PF00430 ATP synthase B/B' CF(0) LJC78_19745 PF00137 ATP synthase subunit C LJC78_19750 PF00119 ATP synthase A chain LJC78_19755 PF03899 ATP synthase I chain LJC78_19765 PF00464 Serine hydroxymethyltransferase LJC78_19770 PF04260 Protein of unknown function (DUF436) LJC78_19775 PF02502 Ribose/Galactose Isomerase LJC78_19780 PF01451 Low molecular weight phosphotyrosine protein phosphatase LJC78_19785 PF02659 Putative manganese efflux pump LJC78_19790 PF01300 Telomere recombination LJC78_19790 PF03481 Putative GTP-binding controlling metal-binding LJC78_19800 PF09551 Stage II sporulation protein R (spore_II_R) LJC78_19805 PF17094 Uncharacterised protein family (UPF0715) LJC78_19810 PF17247 Family of unknown function (DUF5316) LJC78_19815 PF17827 PrmC N-terminal domain LJC78_19815 PF05175 Methyltransferase small domain LJC78_19820 PF03462 PCRF domain LJC78_19820 PF00472 RF-1 domain LJC78_19825 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily LJC78_19830 PF13411 MerR HTH family regulatory protein LJC78_19835 PF03547 Membrane transport protein LJC78_19840 PF03949 Malic enzyme, NAD binding domain LJC78_19840 PF00390 Malic enzyme, N-terminal domain LJC78_19845 PF00265 Thymidine kinase LJC78_19850 PF01197 Ribosomal protein L31 LJC78_19855 PF07498 Rho termination factor, N-terminal domain LJC78_19855 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain LJC78_19855 PF07497 Rho termination factor, RNA-binding domain LJC78_19865 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded LJC78_19870 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) LJC78_19880 PF00923 Transaldolase/Fructose-6-phosphate aldolase LJC78_19885 PF01116 Fructose-bisphosphate aldolase class-II LJC78_19890 PF00072 Response regulator receiver domain LJC78_19895 PF10740 Domain of unknown function (DUF2529) LJC78_19900 PF06418 CTP synthase N-terminus LJC78_19900 PF00117 Glutamine amidotransferase class-I LJC78_19905 PF05066 HB1, ASXL, restriction endonuclease HTH domain LJC78_19910 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LJC78_19910 PF02770 Acyl-CoA dehydrogenase, middle domain LJC78_19910 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LJC78_19915 PF13183 4Fe-4S dicluster domain LJC78_19915 PF02754 Cysteine-rich domain LJC78_19920 PF13091 PLD-like domain LJC78_19925 PF03851 UV-endonuclease UvdE LJC78_19935 PF01872 RibD C-terminal domain LJC78_19945 PF13091 PLD-like domain LJC78_19945 PF13396 Phospholipase_D-nuclease N-terminal LJC78_19955 PF02665 Nitrate reductase gamma subunit LJC78_19960 PF02613 Nitrate reductase delta subunit LJC78_19965 PF14711 Respiratory nitrate reductase beta C-terminal LJC78_19965 PF13247 4Fe-4S dicluster domain LJC78_19970 PF14710 Respiratory nitrate reductase alpha N-terminal LJC78_19970 PF01568 Molydopterin dinucleotide binding domain LJC78_19970 PF00384 Molybdopterin oxidoreductase LJC78_19980 PF14256 YwiC-like protein LJC78_19985 PF00325 Bacterial regulatory proteins, crp family LJC78_19985 PF00027 Cyclic nucleotide-binding domain LJC78_19990 PF07690 Major Facilitator Superfamily LJC78_19995 PF00750 tRNA synthetases class I (R) LJC78_19995 PF05746 DALR anticodon binding domain LJC78_19995 PF03485 Arginyl tRNA synthetase N terminal domain LJC78_20000 PF09148 Domain of unknown function (DUF1934) LJC78_20005 PF11420 Bacteriocin subtilosin A LJC78_20015 PF05402 Coenzyme PQQ synthesis protein D (PqqD) LJC78_20015 PF04055 Radical SAM superfamily LJC78_20015 PF13186 Iron-sulfur cluster-binding domain LJC78_20025 PF00005 ABC transporter LJC78_20035 PF05193 Peptidase M16 inactive domain LJC78_20040 PF00675 Insulinase (Peptidase family M16) LJC78_20060 PF18801 response regulator aspartate phosphatase H, N terminal LJC78_20065 PF11131 Rap-phr extracellular signalling LJC78_20075 PF00491 Arginase family LJC78_20080 PF17284 Spermidine synthase tetramerisation domain LJC78_20085 PF00912 Transglycosylase LJC78_20085 PF00905 Penicillin binding protein transpeptidase domain LJC78_20095 PF08741 YwhD family LJC78_20100 PF02163 Peptidase family M50 LJC78_20105 PF01361 Tautomerase enzyme LJC78_20110 PF01047 MarR family LJC78_20115 PF03129 Anticodon binding domain LJC78_20115 PF02824 TGS domain LJC78_20115 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain LJC78_20115 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) LJC78_20120 PF07690 Major Facilitator Superfamily LJC78_20125 PF02082 Transcriptional regulator LJC78_20135 PF01966 HD domain LJC78_20140 PF07293 Protein of unknown function (DUF1450) LJC78_20150 PF00892 EamA-like transporter family LJC78_20155 PF03099 Biotin/lipoate A/B protein ligase family LJC78_20160 PF03466 LysR substrate binding domain LJC78_20160 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LJC78_20165 PF01515 Phosphate acetyl/butaryl transferase LJC78_20170 PF06778 Chlorite dismutase LJC78_20180 PF00155 Aminotransferase class I and II LJC78_20185 PF07690 Major Facilitator Superfamily LJC78_20200 PF07883 Cupin domain LJC78_20210 PF07690 Major Facilitator Superfamily LJC78_20215 PF00324 Amino acid permease LJC78_20220 PF01546 Peptidase family M20/M25/M40 LJC78_20225 PF00171 Aldehyde dehydrogenase family LJC78_20230 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain LJC78_20230 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase LJC78_20235 PF17735 Biofilm surface layer A LJC78_20240 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase LJC78_20245 PF04321 RmlD substrate binding domain LJC78_20250 PF16363 GDP-mannose 4,6 dehydratase LJC78_20255 PF00483 Nucleotidyl transferase LJC78_20260 PF04101 Glycosyltransferase family 28 C-terminal domain LJC78_20265 PF02348 Cytidylyltransferase LJC78_20270 PF03102 NeuB family LJC78_20270 PF08666 SAF domain LJC78_20275 PF00583 Acetyltransferase (GNAT) family LJC78_20280 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family LJC78_20285 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase LJC78_20290 PF00535 Glycosyl transferase family 2 LJC78_20295 PF09671 Spore coat protein (Spore_GerQ) LJC78_20300 PF04241 Protein of unknown function (DUF423) LJC78_20305 PF00860 Permease family LJC78_20310 PF17261 Family of unknown function (DUF5327) LJC78_20315 PF00171 Aldehyde dehydrogenase family LJC78_20320 PF03167 Uracil DNA glycosylase superfamily LJC78_20325 PF00535 Glycosyl transferase family 2 LJC78_20330 PF08543 Phosphomethylpyrimidine kinase LJC78_20340 PF00251 Glycosyl hydrolases family 32 N-terminal domain LJC78_20340 PF08244 Glycosyl hydrolases family 32 C terminal LJC78_20345 PF00367 phosphotransferase system, EIIB LJC78_20345 PF02378 Phosphotransferase system, EIIC LJC78_20350 PF01226 Formate/nitrite transporter LJC78_20365 PF00082 Subtilase family LJC78_20365 PF02225 PA domain LJC78_20365 PF05922 Peptidase inhibitor I9 LJC78_20365 PF13860 FlgD Ig-like domain LJC78_20370 PF00296 Luciferase-like monooxygenase LJC78_20375 PF00881 Nitroreductase family LJC78_20380 PF01098 Cell cycle protein LJC78_20390 PF17368 Spore morphogenesis and germination YwcE LJC78_20395 PF03626 Prokaryotic Cytochrome C oxidase subunit IV LJC78_20400 PF00510 Cytochrome c oxidase subunit III LJC78_20405 PF00115 Cytochrome C and Quinol oxidase polypeptide I LJC78_20410 PF00116 Cytochrome C oxidase subunit II, periplasmic domain LJC78_20410 PF02790 Cytochrome C oxidase subunit II, transmembrane domain LJC78_20415 PF04226 Transglycosylase associated protein LJC78_20420 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain LJC78_20420 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain LJC78_20425 PF08544 GHMP kinases C terminal LJC78_20425 PF00288 GHMP kinases N terminal domain LJC78_20425 PF10509 Galactokinase galactose-binding signature LJC78_20430 PF04138 GtrA-like protein LJC78_20435 PF00440 Bacterial regulatory proteins, tetR family LJC78_20440 PF08671 Anti-repressor SinI LJC78_20445 PF04341 Protein of unknown function, DUF485 LJC78_20450 PF00474 Sodium:solute symporter family LJC78_20455 PF01323 DSBA-like thioredoxin domain LJC78_20460 PF04261 Dyp-type peroxidase family LJC78_20460 PF10518 TAT (twin-arginine translocation) pathway signal sequence LJC78_20465 PF09375 Imelysin LJC78_20470 PF03239 Iron permease FTR1 family LJC78_20475 PF02581 Thiamine monophosphate synthase LJC78_20480 PF02110 Hydroxyethylthiazole kinase family LJC78_20485 PF03466 LysR substrate binding domain LJC78_20485 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LJC78_20490 PF03788 LrgA family LJC78_20495 PF04172 LrgB-like family LJC78_20500 PF12832 MFS_1 like family LJC78_20505 PF09962 Uncharacterized conserved protein (DUF2196) LJC78_20510 PF10672 S-adenosylmethionine-dependent methyltransferase LJC78_20510 PF17785 PUA-like domain LJC78_20515 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily LJC78_20520 PF10924 Protein of unknown function (DUF2711) LJC78_20535 PF02378 Phosphotransferase system, EIIC LJC78_20535 PF00367 phosphotransferase system, EIIB LJC78_20540 PF00874 PRD domain LJC78_20540 PF03123 CAT RNA binding domain LJC78_20545 PF01501 Glycosyl transferase family 8 LJC78_20550 PF09529 Integral membrane protein (intg_mem_TP0381) LJC78_20555 PF01047 MarR family LJC78_20560 PF00579 tRNA synthetases class I (W and Y) LJC78_20560 PF01479 S4 domain LJC78_20565 PF04389 Peptidase family M28 LJC78_20565 PF02225 PA domain LJC78_20570 PF04607 Region found in RelA / SpoT proteins LJC78_20580 PF01040 UbiA prenyltransferase family LJC78_20590 PF12459 D-Ala-teichoic acid biosynthesis protein LJC78_20595 PF13193 AMP-binding enzyme C-terminal domain LJC78_20595 PF00501 AMP-binding enzyme LJC78_20600 PF03062 MBOAT, membrane-bound O-acyltransferase family LJC78_20605 PF00550 Phosphopantetheine attachment site LJC78_20610 PF04914 DltD protein LJC78_20620 PF01063 Amino-transferase class IV LJC78_20625 PF11975 Family 4 glycosyl hydrolase C-terminal domain LJC78_20625 PF02056 Family 4 glycosyl hydrolase LJC78_20630 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit LJC78_20635 PF02378 Phosphotransferase system, EIIC LJC78_20640 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit LJC78_20645 PF00874 PRD domain LJC78_20645 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 LJC78_20645 PF05043 Mga helix-turn-helix domain LJC78_20645 PF08279 HTH domain LJC78_20655 PF02245 Methylpurine-DNA glycosylase (MPG) LJC78_20660 PF00199 Catalase LJC78_20660 PF06628 Catalase-related immune-responsive LJC78_20665 PF07690 Major Facilitator Superfamily LJC78_20670 PF12679 ABC-2 family transporter protein LJC78_20675 PF00005 ABC transporter LJC78_20675 PF13732 Domain of unknown function (DUF4162) LJC78_20680 PF13396 Phospholipase_D-nuclease N-terminal LJC78_20690 PF17280 Family of unknown function (DUF5345) LJC78_20695 PF04542 Sigma-70 region 2 LJC78_20695 PF08281 Sigma-70, region 4 LJC78_20700 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin LJC78_20705 PF01256 Carbohydrate kinase LJC78_20710 PF00005 ABC transporter LJC78_20710 PF00664 ABC transporter transmembrane region LJC78_20715 PF00005 ABC transporter LJC78_20715 PF00664 ABC transporter transmembrane region LJC78_20720 PF02322 Cytochrome bd terminal oxidase subunit II LJC78_20725 PF01654 Cytochrome bd terminal oxidase subunit I LJC78_20730 PF03390 2-hydroxycarboxylate transporter family LJC78_20735 PF01435 Peptidase family M48 LJC78_20745 PF01522 Polysaccharide deacetylase LJC78_20750 PF03459 TOBE domain LJC78_20750 PF00005 ABC transporter LJC78_20750 PF17912 MalK OB fold domain LJC78_20755 PF13556 PucR C-terminal helix-turn-helix domain LJC78_20760 PF00171 Aldehyde dehydrogenase family LJC78_20765 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) LJC78_20765 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 LJC78_20770 PF16363 GDP-mannose 4,6 dehydratase LJC78_20780 PF07730 Histidine kinase LJC78_20785 PF00196 Bacterial regulatory proteins, luxR family LJC78_20785 PF00072 Response regulator receiver domain LJC78_20790 PF07687 Peptidase dimerisation domain LJC78_20790 PF01546 Peptidase family M20/M25/M40 LJC78_20800 PF04525 LURP-one-related LJC78_20805 PF01717 Cobalamin-independent synthase, Catalytic domain LJC78_20810 PF01717 Cobalamin-independent synthase, Catalytic domain LJC78_20820 PF01144 Coenzyme A transferase LJC78_20825 PF01144 Coenzyme A transferase LJC78_20835 PF08241 Methyltransferase domain LJC78_20840 PF07662 Na+ dependent nucleoside transporter C-terminus LJC78_20840 PF01773 Na+ dependent nucleoside transporter N-terminus LJC78_20855 PF18011 C-terminal domain found in long catalases LJC78_20855 PF06628 Catalase-related immune-responsive LJC78_20855 PF00199 Catalase LJC78_20860 PF03600 Citrate transporter LJC78_20865 PF00722 Glycosyl hydrolases family 16 LJC78_20870 PF00874 PRD domain LJC78_20870 PF03123 CAT RNA binding domain LJC78_20880 PF11700 Vacuole effluxer Atg22 like LJC78_20885 PF03880 DbpA RNA binding domain LJC78_20885 PF00270 DEAD/DEAH box helicase LJC78_20885 PF00271 Helicase conserved C-terminal domain LJC78_20890 PF13472 GDSL-like Lipase/Acylhydrolase family LJC78_20905 PF14176 YxiJ-like protein LJC78_20925 PF10898 Protein of unknown function (DUF2716) LJC78_21000 PF14176 YxiJ-like protein LJC78_21005 PF05593 RHS Repeat LJC78_21010 PF00892 EamA-like transporter family LJC78_21020 PF10014 2OG-Fe dioxygenase LJC78_21025 PF00582 Universal stress protein family LJC78_21035 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 LJC78_21035 PF02378 Phosphotransferase system, EIIC LJC78_21035 PF00367 phosphotransferase system, EIIB LJC78_21055 PF14449 Pre-toxin TG LJC78_21055 PF04740 LXG domain of WXG superfamily LJC78_21065 PF16888 Domain of unknown function (DUF5082) LJC78_21070 PF08463 EcoEI R protein C-terminal LJC78_21070 PF00271 Helicase conserved C-terminal domain LJC78_21070 PF13588 Type I restriction enzyme R protein N terminus (HSDR_N) LJC78_21070 PF04851 Type III restriction enzyme, res subunit LJC78_21075 PF00293 NUDIX domain LJC78_21080 PF13086 AAA domain LJC78_21080 PF13195 Protein of unknown function (DUF4011) LJC78_21080 PF13087 AAA domain LJC78_21085 PF16369 C-terminal lipocalin-like domain LJC78_21085 PF04616 Glycosyl hydrolases family 43 LJC78_21100 PF02885 Glycosyl transferase family, helical bundle domain LJC78_21100 PF00591 Glycosyl transferase family, a/b domain LJC78_21100 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain LJC78_21105 PF07662 Na+ dependent nucleoside transporter C-terminus LJC78_21105 PF01773 Na+ dependent nucleoside transporter N-terminus LJC78_21110 PF01791 DeoC/LacD family aldolase LJC78_21115 PF04198 Putative sugar-binding domain LJC78_21120 PF06724 Domain of Unknown Function (DUF1206) LJC78_21125 PF04346 Ethanolamine utilisation protein, EutH LJC78_21130 PF03972 MmgE/PrpD family LJC78_21135 PF01546 Peptidase family M20/M25/M40 LJC78_21135 PF07687 Peptidase dimerisation domain LJC78_21140 PF00005 ABC transporter LJC78_21145 PF00528 Binding-protein-dependent transport system inner membrane component LJC78_21150 PF00497 Bacterial extracellular solute-binding proteins, family 3 LJC78_21155 PF00583 Acetyltransferase (GNAT) family LJC78_21160 PF00296 Luciferase-like monooxygenase LJC78_21165 PF02275 Linear amide C-N hydrolases, choloylglycine hydrolase family LJC78_21180 PF11631 Protein of unknown function (DUF3255) LJC78_21200 PF01497 Periplasmic binding protein LJC78_21205 PF06486 Protein of unknown function (DUF1093) LJC78_21220 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LJC78_21225 PF00486 Transcriptional regulatory protein, C terminal LJC78_21225 PF00072 Response regulator receiver domain LJC78_21230 PF01116 Fructose-bisphosphate aldolase class-II LJC78_21235 PF01261 Xylose isomerase-like TIM barrel LJC78_21240 PF01261 Xylose isomerase-like TIM barrel LJC78_21245 PF02894 Oxidoreductase family, C-terminal alpha/beta domain LJC78_21245 PF01408 Oxidoreductase family, NAD-binding Rossmann fold LJC78_21250 PF07690 Major Facilitator Superfamily LJC78_21255 PF01261 Xylose isomerase-like TIM barrel LJC78_21260 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain LJC78_21260 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain LJC78_21260 PF00205 Thiamine pyrophosphate enzyme, central domain LJC78_21265 PF00294 pfkB family carbohydrate kinase LJC78_21270 PF04962 KduI/IolB family LJC78_21275 PF00171 Aldehyde dehydrogenase family LJC78_21280 PF01609 Transposase DDE domain LJC78_21285 PF08220 DeoR-like helix-turn-helix domain LJC78_21285 PF00455 DeoR C terminal sensor domain LJC78_21290 PF00248 Aldo/keto reductase family LJC78_21320 PF00183 Hsp90 protein LJC78_21350 PF01609 Transposase DDE domain LJC78_21360 PF00664 ABC transporter transmembrane region LJC78_21360 PF00005 ABC transporter LJC78_21360 PF03412 Peptidase C39 family LJC78_21375 PF07883 Cupin domain LJC78_21380 PF00440 Bacterial regulatory proteins, tetR family LJC78_21385 PF00106 short chain dehydrogenase LJC78_21390 PF01047 MarR family LJC78_21395 PF03788 LrgA family LJC78_21400 PF04172 LrgB-like family LJC78_21405 PF04230 Polysaccharide pyruvyl transferase LJC78_21410 PF02595 Glycerate kinase family LJC78_21415 PF00392 Bacterial regulatory proteins, gntR family LJC78_21415 PF07729 FCD domain LJC78_21420 PF00370 FGGY family of carbohydrate kinases, N-terminal domain LJC78_21420 PF02782 FGGY family of carbohydrate kinases, C-terminal domain LJC78_21425 PF02447 GntP family permease LJC78_21430 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase LJC78_21430 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain LJC78_21435 PF00578 AhpC/TSA family LJC78_21440 PF13192 Thioredoxin domain LJC78_21440 PF07992 Pyridine nucleotide-disulphide oxidoreductase LJC78_21445 PF00232 Glycosyl hydrolase family 1 LJC78_21450 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 LJC78_21460 PF07702 UTRA domain LJC78_21460 PF00392 Bacterial regulatory proteins, gntR family LJC78_21470 PF00005 ABC transporter LJC78_21475 PF06874 Firmicute fructose-1,6-bisphosphatase LJC78_21490 PF00011 Hsp20/alpha crystallin family LJC78_21505 PF01695 IstB-like ATP binding protein LJC78_21510 PF00665 Integrase core domain LJC78_21525 PF00580 UvrD/REP helicase N-terminal domain LJC78_21525 PF13361 UvrD-like helicase C-terminal domain LJC78_21555 PF01527 Transposase LJC78_21590 PF02590 Predicted SPOUT methyltransferase LJC78_21595 PF14116 YyzF-like protein LJC78_21605 PF00107 Zinc-binding dehydrogenase LJC78_21605 PF08240 Alcohol dehydrogenase GroES-like domain LJC78_21615 PF10852 Protein of unknown function (DUF2651) LJC78_21630 PF00583 Acetyltransferase (GNAT) family LJC78_21635 PF18801 response regulator aspartate phosphatase H, N terminal LJC78_21645 PF00491 Arginase family LJC78_21650 PF00324 Amino acid permease LJC78_21655 PF00202 Aminotransferase class-III LJC78_21670 PF17418 Sporulation delaying protein SdpA LJC78_21675 PF07853 Protein of unknown function (DUF1648) LJC78_21675 PF13630 SdpI/YhfL protein family LJC78_21680 PF01022 Bacterial regulatory protein, arsR family LJC78_21685 PF00158 Sigma-54 interaction domain LJC78_21685 PF13426 PAS domain LJC78_21685 PF02954 Bacterial regulatory protein, Fis family LJC78_21700 PF13180 PDZ domain LJC78_21705 PF00753 Metallo-beta-lactamase superfamily LJC78_21710 PF09648 YycH protein LJC78_21715 PF07435 YycH protein LJC78_21720 PF00672 HAMP domain LJC78_21720 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LJC78_21720 PF00512 His Kinase A (phospho-acceptor) domain LJC78_21720 PF13426 PAS domain LJC78_21725 PF00486 Transcriptional regulatory protein, C terminal LJC78_21725 PF00072 Response regulator receiver domain LJC78_21750 PF00709 Adenylosuccinate synthetase LJC78_21755 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily LJC78_21760 PF00772 DnaB-like helicase N terminal domain LJC78_21760 PF03796 DnaB-like helicase C terminal domain LJC78_21765 PF09954 Uncharacterized protein conserved in bacteria (DUF2188) LJC78_21775 PF14174 YycC-like protein LJC78_21780 PF07690 Major Facilitator Superfamily LJC78_21785 PF13231 Dolichyl-phosphate-mannose-protein mannosyltransferase LJC78_21790 PF03948 Ribosomal protein L9, C-terminal domain LJC78_21790 PF01281 Ribosomal protein L9, N-terminal domain LJC78_21795 PF01368 DHH family LJC78_21795 PF02272 DHHA1 domain LJC78_21800 PF09991 Predicted membrane protein (DUF2232) LJC78_21815 PF01638 HxlR-like helix-turn-helix LJC78_21820 PF01368 DHH family LJC78_21820 PF02833 DHHA2 domain LJC78_21830 PF07690 Major Facilitator Superfamily LJC78_21835 PF13411 MerR HTH family regulatory protein LJC78_21835 PF06445 GyrI-like small molecule binding domain LJC78_21845 PF13474 SnoaL-like domain LJC78_21850 PF00805 Pentapeptide repeats (8 copies) LJC78_21865 PF01047 MarR family LJC78_21870 PF13673 Acetyltransferase (GNAT) domain LJC78_21880 PF00583 Acetyltransferase (GNAT) family LJC78_21885 PF04237 YjbR LJC78_21890 PF01872 RibD C-terminal domain LJC78_21900 PF06445 GyrI-like small molecule binding domain LJC78_21905 PF03190 Protein of unknown function, DUF255 LJC78_21910 PF02517 CPBP intramembrane metalloprotease LJC78_21915 PF00083 Sugar (and other) transporter LJC78_21920 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily LJC78_21925 PF00899 ThiF family LJC78_21930 PF00004 ATPase family associated with various cellular activities (AAA) LJC78_21930 PF07724 AAA domain (Cdc48 subfamily) LJC78_21930 PF17871 AAA lid domain LJC78_21930 PF02861 Clp amino terminal domain, pathogenicity island component LJC78_21930 PF10431 C-terminal, D2-small domain, of ClpB protein LJC78_21945 PF03372 Endonuclease/Exonuclease/phosphatase family LJC78_21950 PF01084 Ribosomal protein S18 LJC78_21955 PF00436 Single-strand binding protein family LJC78_21960 PF01250 Ribosomal protein S6 LJC78_21965 PF06071 Protein of unknown function (DUF933) LJC78_21965 PF01926 50S ribosome-binding GTPase LJC78_21970 PF04879 Molybdopterin oxidoreductase Fe4S4 domain LJC78_21970 PF00384 Molybdopterin oxidoreductase LJC78_21970 PF01568 Molydopterin dinucleotide binding domain LJC78_21975 PF06107 Bacterial protein of unknown function (DUF951) LJC78_21985 PF06866 Protein of unknown function (DUF1256) LJC78_21990 PF17762 HTH domain found in ParB protein LJC78_21990 PF02195 ParB-like nuclease domain LJC78_21995 PF13614 AAA domain LJC78_22000 PF06713 Bacterial PH domain LJC78_22005 PF02195 ParB-like nuclease domain LJC78_22005 PF17762 HTH domain found in ParB protein LJC78_22010 PF02527 rRNA small subunit methyltransferase G LJC78_22015 PF01134 Glucose inhibited division protein A LJC78_22015 PF13932 GidA associated domain LJC78_22020 PF01926 50S ribosome-binding GTPase LJC78_22020 PF12631 MnmE helical domain LJC78_22020 PF10396 GTP-binding protein TrmE N-terminus LJC78_22025 PF14804 Jag N-terminus LJC78_22025 PF01424 R3H domain LJC78_22030 PF02096 60Kd inner membrane protein LJC78_22035 PF00825 Ribonuclease P LJC78_22040 PF00468 Ribosomal protein L34