locus-tag class description SD85_00005 PF00308 Bacterial dnaA protein SD85_00005 PF11638 DnaA N-terminal domain SD85_00005 PF08299 Bacterial dnaA protein helix-turn-helix SD85_00010 PF02768 DNA polymerase III beta subunit, C-terminal domain SD85_00010 PF02767 DNA polymerase III beta subunit, central domain SD85_00010 PF00712 DNA polymerase III beta subunit, N-terminal domain SD85_00020 PF02463 RecF/RecN/SMC N terminal domain SD85_00025 PF04025 Domain of unknown function (DUF370) SD85_00030 PF00204 DNA gyrase B SD85_00030 PF00986 DNA gyrase B subunit, carboxyl terminus SD85_00030 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SD85_00030 PF01751 Toprim domain SD85_00035 PF00521 DNA gyrase/topoisomerase IV, subunit A SD85_00035 PF03989 DNA gyrase C-terminal domain, beta-propeller SD85_00065 PF14175 YaaC-like Protein SD85_00070 PF00571 CBS domain SD85_00070 PF00478 IMP dehydrogenase / GMP reductase domain SD85_00075 PF00768 D-alanyl-D-alanine carboxypeptidase SD85_00075 PF07943 Penicillin-binding protein 5, C-terminal domain SD85_00080 PF01680 SOR/SNZ family SD85_00085 PF01174 SNO glutamine amidotransferase family SD85_00090 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) SD85_00090 PF02403 Seryl-tRNA synthetase N-terminal domain SD85_00100 PF01712 Deoxynucleoside kinase SD85_00105 PF01712 Deoxynucleoside kinase SD85_00110 PF01476 LysM domain SD85_00110 PF00704 Glycosyl hydrolases family 18 SD85_00115 PF00857 Isochorismatase family SD85_00120 PF14437 MafB19-like deaminase SD85_00125 PF12169 DNA polymerase III subunits gamma and tau domain III SD85_00130 PF02575 YbaB/EbfC DNA-binding family SD85_00135 PF02132 RecR protein SD85_00135 PF13662 Toprim domain SD85_00140 PF10704 Protein of unknown function (DUF2508) SD85_00145 PF07441 SigmaK-factor processing regulatory protein BofA SD85_00175 PF10764 Inhibitor of sigma-G Gin SD85_00180 PF10112 5-bromo-4-chloroindolyl phosphate hydrolysis protein SD85_00185 PF05816 Toxic anion resistance protein (TelA) SD85_00190 PF01276 Orn/Lys/Arg decarboxylase, major domain SD85_00190 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain SD85_00195 PF02223 Thymidylate kinase SD85_00200 PF06153 Cyclic-di-AMP receptor SD85_00205 PF03885 Protein of unknown function (DUF327) SD85_00210 PF09115 DNA polymerase III, delta subunit, C terminal SD85_00215 PF04468 PSP1 C-terminal conserved region SD85_00220 PF06156 Initiation control protein YabA SD85_00225 PF05175 Methyltransferase small domain SD85_00230 PF01541 GIY-YIG catalytic domain SD85_00235 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases SD85_00240 PF18277 AbrB C-terminal domain SD85_00240 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin SD85_00245 PF08264 Anticodon-binding domain of tRNA SD85_00245 PF09334 tRNA synthetases class I (M) SD85_00245 PF01588 Putative tRNA binding domain SD85_00250 PF01026 TatD related DNase SD85_00255 PF07501 G5 domain SD85_00255 PF03990 G5-linked-Ubiquitin-like domain SD85_00255 PF06725 3D domain SD85_00260 PF13662 Toprim domain SD85_00260 PF13331 Domain of unknown function (DUF4093) SD85_00265 PF00398 Ribosomal RNA adenine dimethylase SD85_00270 PF05582 YabG peptidase U57 SD85_00275 PF06257 Biofilm formation stimulator VEG SD85_00280 PF00269 Small, acid-soluble spore proteins, alpha/beta type SD85_00285 PF08544 GHMP kinases C terminal SD85_00285 PF00288 GHMP kinases N terminal domain SD85_00290 PF09182 Bacterial purine repressor, N-terminal SD85_00290 PF00156 Phosphoribosyl transferase domain SD85_00295 PF01042 Endoribonuclease L-PSP SD85_00300 PF04026 SpoVG SD85_00310 PF00483 Nucleotidyl transferase SD85_00310 PF00132 Bacterial transferase hexapeptide (six repeats) SD85_00315 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase SD85_00315 PF14572 Phosphoribosyl synthetase-associated domain SD85_00320 PF14693 Ribosomal protein TL5, C-terminal domain SD85_00320 PF01386 Ribosomal L25p family SD85_00325 PF01195 Peptidyl-tRNA hydrolase SD85_00330 PF10955 Protein of unknown function (DUF2757) SD85_00335 PF00271 Helicase conserved C-terminal domain SD85_00335 PF03461 TRCF domain SD85_00335 PF17757 UvrB interaction domain SD85_00335 PF02559 CarD-like/TRCF domain SD85_00335 PF00270 DEAD/DEAH box helicase SD85_00340 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin SD85_00340 PF15714 Stage V sporulation protein T C-terminal, transcription factor SD85_00345 PF14667 Polysaccharide biosynthesis C-terminal domain SD85_00345 PF01943 Polysaccharide biosynthesis protein SD85_00350 PF03819 MazG nucleotide pyrophosphohydrolase domain SD85_00350 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases SD85_00355 PF01479 S4 domain SD85_00360 PF07873 YabP family SD85_00365 PF09578 Spore cortex protein YabQ (Spore_YabQ) SD85_00370 PF04977 Septum formation initiator SD85_00375 PF00575 S1 RNA binding domain SD85_00390 PF07228 Stage II sporulation protein E (SpoIIE) SD85_00395 PF00092 von Willebrand factor type A domain SD85_00400 PF00069 Protein kinase domain SD85_00405 PF11734 TilS substrate C-terminal domain SD85_00405 PF09179 TilS substrate binding domain SD85_00405 PF01171 PP-loop family SD85_00415 PF00004 ATPase family associated with various cellular activities (AAA) SD85_00415 PF17862 AAA+ lid domain SD85_00415 PF01434 Peptidase family M41 SD85_00415 PF06480 FtsH Extracellular SD85_00420 PF03309 Type III pantothenate kinase SD85_00425 PF01430 Hsp33 protein SD85_00430 PF13145 PPIC-type PPIASE domain SD85_00435 PF00291 Pyridoxal-phosphate dependent enzyme SD85_00440 PF04715 Anthranilate synthase component I, N terminal region SD85_00440 PF00425 chorismate binding enzyme SD85_00445 PF00117 Glutamine amidotransferase class-I SD85_00450 PF01063 Amino-transferase class IV SD85_00455 PF00809 Pterin binding enzyme SD85_00460 PF02152 Dihydroneopterin aldolase SD85_00465 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) SD85_00470 PF01381 Helix-turn-helix SD85_00475 PF01207 Dihydrouridine synthase (Dus) SD85_00480 PF00152 tRNA synthetases class II (D, K and N) SD85_00480 PF01336 OB-fold nucleic acid binding domain SD85_00505 PF05848 CtsR N-terminal HTH domain SD85_00505 PF17727 CtsR C-terminal dimerization domain SD85_00510 PF02151 UvrB/uvrC motif SD85_00515 PF00217 ATP:guanido phosphotransferase, C-terminal catalytic domain SD85_00520 PF17871 AAA lid domain SD85_00520 PF02861 Clp amino terminal domain, pathogenicity island component SD85_00520 PF10431 C-terminal, D2-small domain, of ClpB protein SD85_00520 PF00004 ATPase family associated with various cellular activities (AAA) SD85_00520 PF07724 AAA domain (Cdc48 subfamily) SD85_00525 PF18073 Rubredoxin metal binding domain SD85_00530 PF10635 DisA bacterial checkpoint controller linker region SD85_00530 PF02457 DisA bacterial checkpoint controller nucleotide-binding SD85_00540 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase SD85_00545 PF02542 YgbB family SD85_00550 PF00749 tRNA synthetases class I (E and Q), catalytic domain SD85_00560 PF06426 Serine acetyltransferase, N-terminal SD85_00560 PF00132 Bacterial transferase hexapeptide (six repeats) SD85_00565 PF09190 DALR domain SD85_00565 PF01406 tRNA synthetases class I (C) catalytic domain SD85_00570 PF00636 Ribonuclease III domain SD85_00575 PF00588 SpoU rRNA Methylase family SD85_00575 PF08032 RNA 2'-O ribose methyltransferase substrate binding SD85_00580 PF05991 YacP-like NYN domain SD85_00585 PF04542 Sigma-70 region 2 SD85_00585 PF08281 Sigma-70, region 4 SD85_00590 PF00471 Ribosomal protein L33 SD85_00595 PF00584 SecE/Sec61-gamma subunits of protein translocation complex SD85_00600 PF00467 KOW motif SD85_00600 PF02357 Transcription termination factor nusG SD85_00605 PF00298 Ribosomal protein L11, RNA binding domain SD85_00605 PF03946 Ribosomal protein L11, N-terminal domain SD85_00610 PF00687 Ribosomal protein L1p/L10e family SD85_00615 PF00466 Ribosomal protein L10 SD85_00620 PF16320 Ribosomal protein L7/L12 dimerisation domain SD85_00620 PF00542 Ribosomal protein L7/L12 C-terminal domain SD85_00625 PF05175 Methyltransferase small domain SD85_00630 PF10385 RNA polymerase beta subunit external 1 domain SD85_00630 PF00562 RNA polymerase Rpb2, domain 6 SD85_00630 PF04565 RNA polymerase Rpb2, domain 3 SD85_00630 PF04560 RNA polymerase Rpb2, domain 7 SD85_00630 PF04563 RNA polymerase beta subunit SD85_00630 PF04561 RNA polymerase Rpb2, domain 2 SD85_00635 PF04997 RNA polymerase Rpb1, domain 1 SD85_00635 PF05000 RNA polymerase Rpb1, domain 4 SD85_00635 PF00623 RNA polymerase Rpb1, domain 2 SD85_00635 PF04983 RNA polymerase Rpb1, domain 3 SD85_00635 PF04998 RNA polymerase Rpb1, domain 5 SD85_00640 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family SD85_00645 PF00164 Ribosomal protein S12/S23 SD85_00650 PF00177 Ribosomal protein S7p/S5e SD85_00655 PF03144 Elongation factor Tu domain 2 SD85_00655 PF00679 Elongation factor G C-terminus SD85_00655 PF03764 Elongation factor G, domain IV SD85_00655 PF00009 Elongation factor Tu GTP binding domain SD85_00655 PF14492 Elongation Factor G, domain II SD85_00660 PF00009 Elongation factor Tu GTP binding domain SD85_00660 PF03144 Elongation factor Tu domain 2 SD85_00660 PF03143 Elongation factor Tu C-terminal domain SD85_00665 PF12146 Serine aminopeptidase, S33 SD85_00670 PF00338 Ribosomal protein S10p/S20e SD85_00675 PF00297 Ribosomal protein L3 SD85_00680 PF00573 Ribosomal protein L4/L1 family SD85_00685 PF00276 Ribosomal protein L23 SD85_00690 PF03947 Ribosomal Proteins L2, C-terminal domain SD85_00690 PF00181 Ribosomal Proteins L2, RNA binding domain SD85_00695 PF00203 Ribosomal protein S19 SD85_00700 PF00237 Ribosomal protein L22p/L17e SD85_00705 PF07650 KH domain SD85_00705 PF00189 Ribosomal protein S3, C-terminal domain SD85_00710 PF00252 Ribosomal protein L16p/L10e SD85_00715 PF00831 Ribosomal L29 protein SD85_00720 PF00366 Ribosomal protein S17 SD85_00725 PF00238 Ribosomal protein L14p/L23e SD85_00730 PF00467 KOW motif SD85_00730 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 SD85_00735 PF00281 Ribosomal protein L5 SD85_00735 PF00673 ribosomal L5P family C-terminus SD85_00740 PF00253 Ribosomal protein S14p/S29e SD85_00745 PF00410 Ribosomal protein S8 SD85_00750 PF00347 Ribosomal protein L6 SD85_00755 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast SD85_00760 PF00333 Ribosomal protein S5, N-terminal domain SD85_00760 PF03719 Ribosomal protein S5, C-terminal domain SD85_00765 PF00327 Ribosomal protein L30p/L7e SD85_00770 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A SD85_00775 PF00344 SecY translocase SD85_00780 PF05191 Adenylate kinase, active site lid SD85_00785 PF00557 Metallopeptidase family M24 SD85_00795 PF01176 Translation initiation factor 1A / IF-1 SD85_00800 PF00444 Ribosomal protein L36 SD85_00805 PF00416 Ribosomal protein S13/S18 SD85_00810 PF00411 Ribosomal protein S11 SD85_00815 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain SD85_00815 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain SD85_00815 PF01000 RNA polymerase Rpb3/RpoA insert domain SD85_00820 PF01196 Ribosomal protein L17 SD85_00825 PF00005 ABC transporter SD85_00830 PF00005 ABC transporter SD85_00835 PF02361 Cobalt transport protein SD85_00840 PF01416 tRNA pseudouridine synthase SD85_00845 PF00572 Ribosomal protein L13 SD85_00850 PF00380 Ribosomal protein S9/S16 SD85_00860 PF08241 Methyltransferase domain SD85_00865 PF10730 Protein of unknown function (DUF2521) SD85_00870 PF01520 N-acetylmuramoyl-L-alanine amidase SD85_00875 PF10609 NUBPL iron-transfer P-loop NTPase SD85_00880 PF17898 Spore germination GerD central core domain SD85_00885 PF14089 KinB-signalling pathway activation in sporulation SD85_00890 PF01522 Polysaccharide deacetylase SD85_00960 PF01740 STAS domain SD85_00960 PF00916 Sulfate permease family SD85_00965 PF01758 Sodium Bile acid symporter family SD85_00970 PF00756 Putative esterase SD85_00975 PF01032 FecCD transport family SD85_00980 PF01032 FecCD transport family SD85_00985 PF01497 Periplasmic binding protein SD85_00990 PF12833 Helix-turn-helix domain SD85_00990 PF01497 Periplasmic binding protein SD85_00995 PF07075 Protein of unknown function (DUF1343) SD85_01000 PF01915 Glycosyl hydrolase family 3 C-terminal domain SD85_01000 PF00933 Glycosyl hydrolase family 3 N terminal domain SD85_01005 PF00144 Beta-lactamase SD85_01010 PF02378 Phosphotransferase system, EIIC SD85_01010 PF00367 phosphotransferase system, EIIB SD85_01015 PF01380 SIS domain SD85_01015 PF01418 Helix-turn-helix domain, rpiR family SD85_01020 PF01380 SIS domain SD85_01030 PF04463 Protein of unknown function (DUF523) SD85_01060 PF08281 Sigma-70, region 4 SD85_01060 PF04542 Sigma-70 region 2 SD85_01065 PF13490 Putative zinc-finger SD85_01070 PF02457 DisA bacterial checkpoint controller nucleotide-binding SD85_01075 PF07949 YbbR-like protein SD85_01080 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain SD85_01080 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II SD85_01080 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I SD85_01080 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III SD85_01085 PF01380 SIS domain SD85_01090 PF00361 Proton-conducting membrane transporter SD85_01090 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus SD85_01095 PF10070 Uncharacterized protein conserved in bacteria (DUF2309) SD85_01110 PF10057 Uncharacterized conserved protein (DUF2294) SD85_01115 PF00561 alpha/beta hydrolase fold SD85_01120 PF00072 Response regulator receiver domain SD85_01120 PF00486 Transcriptional regulatory protein, C terminal SD85_01125 PF00672 HAMP domain SD85_01125 PF00512 His Kinase A (phospho-acceptor) domain SD85_01130 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SD85_01130 PF03466 LysR substrate binding domain SD85_01135 PF00291 Pyridoxal-phosphate dependent enzyme SD85_01140 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain SD85_01140 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain SD85_01140 PF02142 MGS-like domain SD85_01145 PF07690 Major Facilitator Superfamily SD85_01155 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain SD85_01155 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain SD85_01160 PF07836 DmpG-like communication domain SD85_01160 PF00682 HMGL-like SD85_01180 PF00266 Aminotransferase class-V SD85_01205 PF00069 Protein kinase domain SD85_01215 PF16226 Domain of unknown function (DUF4885) SD85_01220 PF00324 Amino acid permease SD85_01225 PF17334 Minor curli fiber component A SD85_01230 PF17340 Family of unknown function (DUF5370) SD85_01235 PF00905 Penicillin binding protein transpeptidase domain SD85_01240 PF00067 Cytochrome P450 SD85_01250 PF02690 Na+/Pi-cotransporter SD85_01255 PF03009 Glycerophosphoryl diester phosphodiesterase family SD85_01260 PF07690 Major Facilitator Superfamily SD85_01265 PF10852 Protein of unknown function (DUF2651) SD85_01270 PF01047 MarR family SD85_01270 PF00583 Acetyltransferase (GNAT) family SD85_01275 PF07690 Major Facilitator Superfamily SD85_01290 PF00892 EamA-like transporter family SD85_01295 PF02311 AraC-like ligand binding domain SD85_01295 PF12833 Helix-turn-helix domain SD85_01300 PF02222 ATP-grasp domain SD85_01305 PF00089 Trypsin SD85_01310 PF10794 Protein of unknown function (DUF2606) SD85_01315 PF12697 Alpha/beta hydrolase family SD85_01320 PF01066 CDP-alcohol phosphatidyltransferase SD85_01325 PF09335 SNARE associated Golgi protein SD85_01330 PF02666 Phosphatidylserine decarboxylase SD85_01340 PF05139 Erythromycin esterase SD85_01350 PF00375 Sodium:dicarboxylate symporter family SD85_01360 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase SD85_01370 PF07853 Protein of unknown function (DUF1648) SD85_01375 PF01063 Amino-transferase class IV SD85_01380 PF00324 Amino acid permease SD85_01385 PF02574 Homocysteine S-methyltransferase SD85_01395 PF01235 Sodium:alanine symporter family SD85_01400 PF04960 Glutaminase SD85_01405 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SD85_01410 PF08664 YcbB domain SD85_01410 PF00072 Response regulator receiver domain SD85_01415 PF00701 Dihydrodipicolinate synthetase family SD85_01420 PF00171 Aldehyde dehydrogenase family SD85_01425 PF07690 Major Facilitator Superfamily SD85_01430 PF13378 Enolase C-terminal domain-like SD85_01435 PF07729 FCD domain SD85_01435 PF00392 Bacterial regulatory proteins, gntR family SD85_01440 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus SD85_01440 PF08666 SAF domain SD85_01445 PF01636 Phosphotransferase enzyme family SD85_01455 PF00072 Response regulator receiver domain SD85_01455 PF00486 Transcriptional regulatory protein, C terminal SD85_01460 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SD85_01460 PF00512 His Kinase A (phospho-acceptor) domain SD85_01465 PF00005 ABC transporter SD85_01475 PF10710 Protein of unknown function (DUF2512) SD85_01485 PF07486 Cell Wall Hydrolase SD85_01490 PF10138 vWA found in TerF C terminus SD85_01500 PF09423 PhoD-like phosphatase SD85_01500 PF16655 PhoD-like phosphatase, N-terminal domain SD85_01505 PF02416 mttA/Hcf106 family SD85_01510 PF00902 Sec-independent protein translocase protein (TatC) SD85_01515 PF01470 Pyroglutamyl peptidase SD85_01520 PF00266 Aminotransferase class-V SD85_01525 PF07690 Major Facilitator Superfamily SD85_01530 PF00440 Bacterial regulatory proteins, tetR family SD85_01535 PF01674 Lipase (class 2) SD85_01540 PF06271 RDD family SD85_01545 PF02810 SEC-C motif SD85_01545 PF05225 helix-turn-helix, Psq domain SD85_01550 PF14501 GHKL domain SD85_01555 PF12679 ABC-2 family transporter protein SD85_01560 PF00248 Aldo/keto reductase family SD85_01565 PF17118 Domain of unknown function (DUF5105) SD85_01565 PF11611 Domain of unknown function (DUF4352) SD85_01570 PF16244 Domain of unknown function (DUF4901) SD85_01585 PF13276 HTH-like domain SD85_01585 PF13333 Integrase core domain SD85_01585 PF00665 Integrase core domain SD85_01590 PF16244 Domain of unknown function (DUF4901) SD85_01595 PF13539 D-alanyl-D-alanine carboxypeptidase SD85_01600 PF18801 response regulator aspartate phosphatase H, N terminal SD85_01610 PF00128 Alpha amylase, catalytic domain SD85_01615 PF01297 Zinc-uptake complex component A periplasmic SD85_01620 PF00005 ABC transporter SD85_01625 PF00950 ABC 3 transport family SD85_01630 PF00296 Luciferase-like monooxygenase SD85_01635 PF02342 TerD domain SD85_01640 PF02342 TerD domain SD85_01645 PF02342 TerD domain SD85_01650 PF03741 Integral membrane protein TerC family SD85_01655 PF14266 Putative component of 'biosynthetic module' SD85_01660 PF05816 Toxic anion resistance protein (TelA) SD85_01665 PF07690 Major Facilitator Superfamily SD85_01675 PF00005 ABC transporter SD85_01675 PF00571 CBS domain SD85_01680 PF00528 Binding-protein-dependent transport system inner membrane component SD85_01685 PF04069 Substrate binding domain of ABC-type glycine betaine transport system SD85_01690 PF01546 Peptidase family M20/M25/M40 SD85_01690 PF07687 Peptidase dimerisation domain SD85_01695 PF03606 C4-dicarboxylate anaerobic carrier SD85_01710 PF00128 Alpha amylase, catalytic domain SD85_01710 PF16738 Starch-binding module 26 SD85_01715 PF00056 lactate/malate dehydrogenase, NAD binding domain SD85_01715 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain SD85_01720 PF02652 L-lactate permease SD85_01725 PF07690 Major Facilitator Superfamily SD85_01730 PF01047 MarR family SD85_01735 PF01810 LysE type translocator SD85_01740 PF08892 YqcI/YcgG family SD85_01745 PF00324 Amino acid permease SD85_01750 PF09347 Domain of unknown function (DUF1989) SD85_01755 PF02540 NAD synthase SD85_01765 PF01202 Shikimate kinase SD85_01770 PF08241 Methyltransferase domain SD85_01775 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SD85_01775 PF03466 LysR substrate binding domain SD85_01780 PF05448 Acetyl xylan esterase (AXE1) SD85_01785 PF10127 RNA repair pathway DNA polymerase beta family SD85_01790 PF01619 Proline dehydrogenase SD85_01795 PF00171 Aldehyde dehydrogenase family SD85_01800 PF00474 Sodium:solute symporter family SD85_01805 PF13556 PucR C-terminal helix-turn-helix domain SD85_01805 PF17853 GGDEF-like domain SD85_01810 PF09323 Domain of unknown function (DUF1980) SD85_01815 PF03773 Predicted permease SD85_01820 PF00561 alpha/beta hydrolase fold SD85_01825 PF07992 Pyridine nucleotide-disulphide oxidoreductase SD85_01830 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases SD85_01835 PF00355 Rieske [2Fe-2S] domain SD85_01840 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain SD85_01840 PF18267 Rubredoxin NAD+ reductase C-terminal domain SD85_01840 PF07992 Pyridine nucleotide-disulphide oxidoreductase SD85_01840 PF04324 BFD-like [2Fe-2S] binding domain SD85_01840 PF01077 Nitrite and sulphite reductase 4Fe-4S domain SD85_01845 PF04879 Molybdopterin oxidoreductase Fe4S4 domain SD85_01845 PF00384 Molybdopterin oxidoreductase SD85_01845 PF01568 Molydopterin dinucleotide binding domain SD85_01850 PF18267 Rubredoxin NAD+ reductase C-terminal domain SD85_01850 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain SD85_01850 PF07992 Pyridine nucleotide-disulphide oxidoreductase SD85_01850 PF04324 BFD-like [2Fe-2S] binding domain SD85_01855 PF07690 Major Facilitator Superfamily SD85_01860 PF02649 Type I GTP cyclohydrolase folE2 SD85_01865 PF03734 L,D-transpeptidase catalytic domain SD85_01875 PF07683 Cobalamin synthesis protein cobW C-terminal domain SD85_01875 PF02492 CobW/HypB/UreG, nucleotide-binding domain SD85_01880 PF00528 Binding-protein-dependent transport system inner membrane component SD85_01885 PF00497 Bacterial extracellular solute-binding proteins, family 3 SD85_01895 PF06271 RDD family SD85_01900 PF10925 Protein of unknown function (DUF2680) SD85_01905 PF01047 MarR family SD85_01915 PF00005 ABC transporter SD85_01920 PF00232 Glycosyl hydrolase family 1 SD85_01925 PF11033 Competence protein J (ComJ) SD85_01930 PF14040 Deoxyribonuclease NucA/NucB SD85_01935 PF00672 HAMP domain SD85_01935 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain SD85_01935 PF17202 Single cache domain 3 SD85_01940 PF01380 SIS domain SD85_01945 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family SD85_01950 PF01638 HxlR-like helix-turn-helix SD85_01960 PF00550 Phosphopantetheine attachment site SD85_01960 PF00668 Condensation domain SD85_01960 PF13193 AMP-binding enzyme C-terminal domain SD85_01960 PF00501 AMP-binding enzyme SD85_01965 PF00501 AMP-binding enzyme SD85_01965 PF00550 Phosphopantetheine attachment site SD85_01965 PF13193 AMP-binding enzyme C-terminal domain SD85_01965 PF00668 Condensation domain SD85_01970 PF00550 Phosphopantetheine attachment site SD85_01970 PF13193 AMP-binding enzyme C-terminal domain SD85_01970 PF00501 AMP-binding enzyme SD85_01970 PF00668 Condensation domain SD85_01970 PF00975 Thioesterase domain SD85_01975 PF00975 Thioesterase domain SD85_01980 PF07690 Major Facilitator Superfamily SD85_01985 PF14317 YcxB-like protein SD85_01990 PF00892 EamA-like transporter family SD85_01995 PF00392 Bacterial regulatory proteins, gntR family SD85_01995 PF00155 Aminotransferase class I and II SD85_02000 PF01648 4'-phosphopantetheinyl transferase superfamily SD85_02010 PF00005 ABC transporter SD85_02015 PF00528 Binding-protein-dependent transport system inner membrane component SD85_02020 PF00497 Bacterial extracellular solute-binding proteins, family 3 SD85_02025 PF03466 LysR substrate binding domain SD85_02025 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SD85_02030 PF02441 Flavoprotein SD85_02035 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase SD85_02050 PF00561 alpha/beta hydrolase fold SD85_02055 PF00854 POT family SD85_02060 PF13229 Right handed beta helix region SD85_02060 PF12708 Pectate lyase superfamily protein SD85_02070 PF03323 Bacillus/Clostridium GerA spore germination protein SD85_02075 PF05504 Spore germination B3/ GerAC like, C-terminal SD85_02080 PF03845 Spore germination protein SD85_02085 PF00005 ABC transporter SD85_02090 PF02687 FtsX-like permease family SD85_02090 PF12704 MacB-like periplasmic core domain SD85_02095 PF00486 Transcriptional regulatory protein, C terminal SD85_02095 PF00072 Response regulator receiver domain SD85_02100 PF00512 His Kinase A (phospho-acceptor) domain SD85_02100 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SD85_02100 PF00672 HAMP domain SD85_02105 PF18801 response regulator aspartate phosphatase H, N terminal SD85_02110 PF11131 Rap-phr extracellular signalling SD85_02115 PF09680 Family of unknown function SD85_02120 PF13840 ACT domain SD85_02120 PF00696 Amino acid kinase family SD85_02125 PF01032 FecCD transport family SD85_02130 PF01032 FecCD transport family SD85_02135 PF00005 ABC transporter SD85_02140 PF01497 Periplasmic binding protein SD85_02145 PF07690 Major Facilitator Superfamily SD85_02150 PF00440 Bacterial regulatory proteins, tetR family SD85_02155 PF00881 Nitroreductase family SD85_02160 PF03992 Antibiotic biosynthesis monooxygenase SD85_02165 PF01022 Bacterial regulatory protein, arsR family SD85_02170 PF00155 Aminotransferase class I and II SD85_02170 PF00392 Bacterial regulatory proteins, gntR family SD85_02175 PF00202 Aminotransferase class-III SD85_02180 PF00171 Aldehyde dehydrogenase family SD85_02185 PF06800 Sugar transport protein SD85_02195 PF07987 Domain of unkown function (DUF1775) SD85_02200 PF04234 CopC domain SD85_02200 PF05425 Copper resistance protein D SD85_02200 PF13115 YtkA-like SD85_02205 PF05573 NosL SD85_02205 PF08220 DeoR-like helix-turn-helix domain SD85_02215 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit SD85_02215 PF02378 Phosphotransferase system, EIIC SD85_02220 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 SD85_02225 PF08125 Mannitol dehydrogenase C-terminal domain SD85_02225 PF01232 Mannitol dehydrogenase Rossmann domain SD85_02230 PF00180 Isocitrate/isopropylmalate dehydrogenase SD85_02235 PF10502 Signal peptidase, peptidase S26 SD85_02240 PF01738 Dienelactone hydrolase family SD85_02245 PF07977 FabA-like domain SD85_02260 PF03746 LamB/YcsF family SD85_02265 PF01566 Natural resistance-associated macrophage protein SD85_02270 PF07286 Protein of unknown function (DUF1445) SD85_02275 PF02682 Carboxyltransferase domain, subdomain C and D SD85_02280 PF02626 Carboxyltransferase domain, subdomain A and B SD85_02285 PF01614 Bacterial transcriptional regulator SD85_02285 PF09339 IclR helix-turn-helix domain SD85_02290 PF13472 GDSL-like Lipase/Acylhydrolase family SD85_02295 PF13129 Protein of unknown function (DUF3953) SD85_02300 PF03992 Antibiotic biosynthesis monooxygenase SD85_02305 PF03717 Penicillin-binding Protein dimerisation domain SD85_02305 PF00905 Penicillin binding protein transpeptidase domain SD85_02305 PF05223 NTF2-like N-terminal transpeptidase domain SD85_02310 PF00248 Aldo/keto reductase family SD85_02315 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 SD85_02315 PF00874 PRD domain SD85_02315 PF05043 Mga helix-turn-helix domain SD85_02315 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit SD85_02315 PF08279 HTH domain SD85_02320 PF00501 AMP-binding enzyme SD85_02320 PF13193 AMP-binding enzyme C-terminal domain SD85_02325 PF13649 Methyltransferase domain SD85_02340 PF13302 Acetyltransferase (GNAT) domain SD85_02345 PF16242 Pyridoxamine 5'-phosphate oxidase like SD85_02350 PF10997 Alternate to MurJ SD85_02355 PF12823 Domain of unknown function (DUF3817) SD85_02360 PF01037 Lrp/AsnC ligand binding domain SD85_02365 PF01751 Toprim domain SD85_02365 PF01131 DNA topoisomerase SD85_02375 PF00990 Diguanylate cyclase, GGDEF domain SD85_02380 PF10096 Uncharacterized protein conserved in bacteria (DUF2334) SD85_02390 PF03170 Bacterial cellulose synthase subunit SD85_02395 PF13520 Amino acid permease SD85_02400 PF00293 NUDIX domain SD85_02405 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain SD85_02405 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain SD85_02405 PF00205 Thiamine pyrophosphate enzyme, central domain SD85_02415 PF01566 Natural resistance-associated macrophage protein SD85_02420 PF04226 Transglycosylase associated protein SD85_02425 PF09954 Uncharacterized protein conserved in bacteria (DUF2188) SD85_02430 PF12787 EcsC protein family SD85_02435 PF00477 Small hydrophilic plant seed protein SD85_02435 PF10685 Stress-induced bacterial acidophilic repeat motif SD85_02445 PF16291 Domain of unknown function (DUF4937 SD85_02450 PF05067 Manganese containing catalase SD85_02455 PF03480 Bacterial extracellular solute-binding protein, family 7 SD85_02460 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SD85_02460 PF17203 Single cache domain 3 SD85_02460 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain SD85_02465 PF08279 HTH domain SD85_02465 PF00072 Response regulator receiver domain SD85_02470 PF00375 Sodium:dicarboxylate symporter family SD85_02475 PF01594 AI-2E family transporter SD85_02480 PF00375 Sodium:dicarboxylate symporter family SD85_02485 PF00005 ABC transporter SD85_02500 PF02771 Acyl-CoA dehydrogenase, N-terminal domain SD85_02500 PF02770 Acyl-CoA dehydrogenase, middle domain SD85_02500 PF08028 Acyl-CoA dehydrogenase, C-terminal domain SD85_02505 PF13040 Fur-regulated basic protein B SD85_02515 PF16916 Dimerisation domain of Zinc Transporter SD85_02515 PF01545 Cation efflux family SD85_02520 PF00085 Thioredoxin SD85_02525 PF07478 D-ala D-ala ligase C-terminus SD85_02525 PF01820 D-ala D-ala ligase N-terminus SD85_02530 PF01225 Mur ligase family, catalytic domain SD85_02530 PF02875 Mur ligase family, glutamate ligase domain SD85_02530 PF08245 Mur ligase middle domain SD85_02535 PF00271 Helicase conserved C-terminal domain SD85_02535 PF00270 DEAD/DEAH box helicase SD85_02540 PF03703 Bacterial PH domain SD85_02545 PF03703 Bacterial PH domain SD85_02550 PF01694 Rhomboid family SD85_02555 PF01648 4'-phosphopantetheinyl transferase superfamily SD85_02565 PF00842 Alanine racemase, C-terminal domain SD85_02565 PF01168 Alanine racemase, N-terminal domain SD85_02570 PF01402 Ribbon-helix-helix protein, copG family SD85_02575 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system SD85_02580 PF01740 STAS domain SD85_02580 PF08678 Rsbr N terminal SD85_02585 PF01740 STAS domain SD85_02590 PF13581 Histidine kinase-like ATPase domain SD85_02595 PF08673 Phosphoserine phosphatase RsbU, N-terminal domain SD85_02595 PF07228 Stage II sporulation protein E (SpoIIE) SD85_02600 PF01740 STAS domain SD85_02605 PF13581 Histidine kinase-like ATPase domain SD85_02610 PF04539 Sigma-70 region 3 SD85_02610 PF04542 Sigma-70 region 2 SD85_02610 PF04545 Sigma-70, region 4 SD85_02615 PF07228 Stage II sporulation protein E (SpoIIE) SD85_02620 PF16921 Tex protein YqgF-like domain SD85_02620 PF17674 HHH domain SD85_02620 PF00575 S1 RNA binding domain SD85_02620 PF09371 Tex-like protein N-terminal domain SD85_02630 PF17283 SprT-like zinc ribbon domain SD85_02630 PF10263 SprT-like family SD85_02675 PF13411 MerR HTH family regulatory protein SD85_02680 PF00106 short chain dehydrogenase SD85_02685 PF00248 Aldo/keto reductase family SD85_02690 PF00106 short chain dehydrogenase SD85_02705 PF00106 short chain dehydrogenase SD85_02710 PF00487 Fatty acid desaturase SD85_02715 PF00313 'Cold-shock' DNA-binding domain SD85_02720 PF02559 CarD-like/TRCF domain SD85_02730 PF01381 Helix-turn-helix SD85_02735 PF12833 Helix-turn-helix domain SD85_02735 PF06445 GyrI-like small molecule binding domain SD85_02745 PF08818 Domain of unknown function (DU1801) SD85_02760 PF12706 Beta-lactamase superfamily domain SD85_02765 PF01037 Lrp/AsnC ligand binding domain SD85_02770 PF00892 EamA-like transporter family SD85_02775 PF00392 Bacterial regulatory proteins, gntR family SD85_02775 PF00155 Aminotransferase class I and II SD85_02780 PF01575 MaoC like domain SD85_02785 PF06821 Serine hydrolase SD85_02790 PF01638 HxlR-like helix-turn-helix SD85_02795 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 SD85_02795 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) SD85_02805 PF01022 Bacterial regulatory protein, arsR family SD85_02810 PF02040 Arsenical pump membrane protein SD85_02815 PF01451 Low molecular weight phosphotyrosine protein phosphatase SD85_02820 PF12746 GNAT acetyltransferase SD85_02825 PF00892 EamA-like transporter family SD85_02830 PF00392 Bacterial regulatory proteins, gntR family SD85_02830 PF00155 Aminotransferase class I and II SD85_02835 PF01613 Flavin reductase like domain SD85_02845 PF02627 Carboxymuconolactone decarboxylase family SD85_02860 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SD85_02860 PF07730 Histidine kinase SD85_02865 PF00196 Bacterial regulatory proteins, luxR family SD85_02865 PF00072 Response regulator receiver domain SD85_02870 PF03176 MMPL family SD85_02880 PF03591 AzlC protein SD85_02885 PF05525 Branched-chain amino acid transport protein SD85_02895 PF04474 Protein of unknown function (DUF554) SD85_02900 PF06445 GyrI-like small molecule binding domain SD85_02900 PF13411 MerR HTH family regulatory protein SD85_02905 PF01545 Cation efflux family SD85_02905 PF16916 Dimerisation domain of Zinc Transporter SD85_02910 PF00881 Nitroreductase family SD85_02915 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily SD85_02920 PF07681 DoxX SD85_02925 PF00085 Thioredoxin SD85_02930 PF00392 Bacterial regulatory proteins, gntR family SD85_02930 PF00155 Aminotransferase class I and II SD85_02950 PF04239 Protein of unknown function (DUF421) SD85_02955 PF00011 Hsp20/alpha crystallin family SD85_02960 PF10676 Spore germination protein gerPA/gerPF SD85_02965 PF10676 Spore germination protein gerPA/gerPF SD85_02970 PF00440 Bacterial regulatory proteins, tetR family SD85_02975 PF13564 DoxX-like family SD85_02980 PF00583 Acetyltransferase (GNAT) family SD85_02990 PF02894 Oxidoreductase family, C-terminal alpha/beta domain SD85_02990 PF01408 Oxidoreductase family, NAD-binding Rossmann fold SD85_02995 PF00356 Bacterial regulatory proteins, lacI family SD85_03000 PF00083 Sugar (and other) transporter SD85_03005 PF00083 Sugar (and other) transporter SD85_03010 PF00083 Sugar (and other) transporter SD85_03020 PF07690 Major Facilitator Superfamily SD85_03035 PF00324 Amino acid permease SD85_03040 PF05163 DinB family SD85_03045 PF01047 MarR family SD85_03050 PF03176 MMPL family SD85_03055 PF00881 Nitroreductase family SD85_03060 PF01047 MarR family SD85_03065 PF07883 Cupin domain SD85_03065 PF01381 Helix-turn-helix SD85_03080 PF07690 Major Facilitator Superfamily SD85_03085 PF01925 Sulfite exporter TauE/SafE SD85_03090 PF07729 FCD domain SD85_03090 PF00392 Bacterial regulatory proteins, gntR family SD85_03095 PF00704 Glycosyl hydrolases family 18 SD85_03095 PF01476 LysM domain SD85_03100 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase SD85_03110 PF11611 Domain of unknown function (DUF4352) SD85_03110 PF08139 Prokaryotic membrane lipoprotein lipid attachment site SD85_03115 PF00245 Alkaline phosphatase SD85_03120 PF16302 Domain of unknown function (DUF4944) SD85_03125 PF00583 Acetyltransferase (GNAT) family SD85_03130 PF01966 HD domain SD85_03135 PF07563 Protein of unknown function (DUF1541) SD85_03140 PF07690 Major Facilitator Superfamily SD85_03145 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit SD85_03150 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit SD85_03155 PF02378 Phosphotransferase system, EIIC SD85_03160 PF00232 Glycosyl hydrolase family 1 SD85_03165 PF07702 UTRA domain SD85_03165 PF00392 Bacterial regulatory proteins, gntR family SD85_03170 PF00480 ROK family SD85_03175 PF01238 Phosphomannose isomerase type I SD85_03180 PF02156 Glycosyl hydrolase family 26 SD85_03225 PF00586 AIR synthase related protein, N-terminal domain SD85_03225 PF02769 AIR synthase related protein, C-terminal domain SD85_03230 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE SD85_03235 PF00814 Glycoprotease family SD85_03240 PF00583 Acetyltransferase (GNAT) family SD85_03245 PF00814 Glycoprotease family SD85_03250 PF16326 ABC transporter C-terminal domain SD85_03250 PF00005 ABC transporter SD85_03250 PF12848 ABC transporter SD85_03255 PF01967 MoaC family SD85_03260 PF06971 Putative DNA-binding protein N-terminus SD85_03260 PF02629 CoA binding domain SD85_03265 PF02416 mttA/Hcf106 family SD85_03270 PF00902 Sec-independent protein translocase protein (TatC) SD85_03275 PF14146 Domain of unknown function (DUF4305) SD85_03280 PF02517 CPBP intramembrane metalloprotease SD85_03285 PF00166 Chaperonin 10 Kd subunit SD85_03290 PF00118 TCP-1/cpn60 chaperonin family SD85_03300 PF13176 Tetratricopeptide repeat SD85_03300 PF00931 NB-ARC domain SD85_03305 PF00107 Zinc-binding dehydrogenase SD85_03305 PF08240 Alcohol dehydrogenase GroES-like domain SD85_03315 PF00294 pfkB family carbohydrate kinase SD85_03320 PF04012 PspA/IM30 family SD85_03325 PF08271 TFIIB zinc-binding SD85_03330 PF04536 TPM domain SD85_03335 PF13421 SPFH domain-Band 7 family SD85_03340 PF07885 Ion channel SD85_03345 PF00083 Sugar (and other) transporter SD85_03350 PF08240 Alcohol dehydrogenase GroES-like domain SD85_03350 PF00107 Zinc-binding dehydrogenase SD85_03355 PF03330 Lytic transglycolase SD85_03360 PF07676 WD40-like Beta Propeller Repeat SD85_03370 PF13276 HTH-like domain SD85_03370 PF00665 Integrase core domain SD85_03370 PF13333 Integrase core domain SD85_03380 PF14169 Cold-inducible protein YdjO SD85_03385 PF12697 Alpha/beta hydrolase family SD85_03390 PF13170 Protein of unknown function (DUF4003) SD85_03395 PF00394 Multicopper oxidase SD85_03395 PF07732 Multicopper oxidase SD85_03395 PF07731 Multicopper oxidase SD85_03400 PF00324 Amino acid permease SD85_03410 PF16916 Dimerisation domain of Zinc Transporter SD85_03410 PF01545 Cation efflux family SD85_03415 PF17863 AAA lid domain SD85_03415 PF07726 ATPase family associated with various cellular activities (AAA) SD85_03420 PF01882 Protein of unknown function DUF58 SD85_03425 PF13559 Domain of unknown function (DUF4129) SD85_03425 PF01841 Transglutaminase-like superfamily SD85_03425 PF11992 Domain of unknown function (DUF3488) SD85_03430 PF00958 GMP synthase C terminal domain SD85_03430 PF00117 Glutamine amidotransferase class-I SD85_03430 PF02540 NAD synthase SD85_03435 PF00860 Permease family SD85_03445 PF13076 Fur-regulated basic protein A SD85_03450 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) SD85_03455 PF14044 NETI protein SD85_03460 PF00731 AIR carboxylase SD85_03465 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain SD85_03465 PF02222 ATP-grasp domain SD85_03470 PF00206 Lyase SD85_03470 PF10397 Adenylosuccinate lyase C-terminus SD85_03475 PF01259 SAICAR synthetase SD85_03480 PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase SD85_03490 PF02769 AIR synthase related protein, C-terminal domain SD85_03490 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain SD85_03490 PF00586 AIR synthase related protein, N-terminal domain SD85_03495 PF00156 Phosphoribosyl transferase domain SD85_03500 PF00586 AIR synthase related protein, N-terminal domain SD85_03500 PF02769 AIR synthase related protein, C-terminal domain SD85_03505 PF00551 Formyl transferase SD85_03510 PF01808 AICARFT/IMPCHase bienzyme SD85_03510 PF02142 MGS-like domain SD85_03515 PF02843 Phosphoribosylglycinamide synthetase, C domain SD85_03515 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain SD85_03515 PF02844 Phosphoribosylglycinamide synthetase, N domain SD85_03520 PF01037 Lrp/AsnC ligand binding domain SD85_03525 PF13520 Amino acid permease SD85_03530 PF11127 Protein of unknown function (DUF2892) SD85_03535 PF01979 Amidohydrolase family SD85_03535 PF13382 Adenine deaminase C-terminal domain SD85_03540 PF11258 Protein of unknown function (DUF3048) N-terminal domain SD85_03540 PF17479 Protein of unknown function (DUF3048) C-terminal domain SD85_03545 PF01371 Trp repressor protein SD85_03550 PF01645 Conserved region in glutamate synthase SD85_03555 PF01884 PcrB family SD85_03560 PF13361 UvrD-like helicase C-terminal domain SD85_03560 PF00580 UvrD/REP helicase N-terminal domain SD85_03565 PF00533 BRCA1 C Terminus (BRCT) domain SD85_03565 PF03120 NAD-dependent DNA ligase OB-fold domain SD85_03565 PF03119 NAD-dependent DNA ligase C4 zinc finger domain SD85_03565 PF12826 Helix-hairpin-helix motif SD85_03565 PF01653 NAD-dependent DNA ligase adenylation domain SD85_03570 PF07537 CamS sex pheromone cAM373 precursor SD85_03580 PF01636 Phosphotransferase enzyme family SD85_03585 PF02308 MgtC family SD85_03590 PF00474 Sodium:solute symporter family SD85_03595 PF02686 Glu-tRNAGln amidotransferase C subunit SD85_03600 PF01425 Amidase SD85_03605 PF02637 GatB domain SD85_03605 PF02934 GatB/GatE catalytic domain SD85_03610 PF00440 Bacterial regulatory proteins, tetR family SD85_03615 PF00873 AcrB/AcrD/AcrF family SD85_03620 PF00781 Diacylglycerol kinase catalytic domain SD85_03625 PF05958 tRNA (Uracil-5-)-methyltransferase SD85_03625 PF01938 TRAM domain SD85_03630 PF02384 N-6 DNA Methylase SD85_03635 PF01420 Type I restriction modification DNA specificity domain SD85_03640 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) SD85_03640 PF11867 Domain of unknown function (DUF3387) SD85_03640 PF18766 SWI2/SNF2 ATPase SD85_03650 PF04634 Protein of unknown function, DUF600 SD85_03655 PF04634 Protein of unknown function, DUF600 SD85_03660 PF04740 LXG domain of WXG superfamily SD85_03670 PF13176 Tetratricopeptide repeat SD85_03670 PF18801 response regulator aspartate phosphatase H, N terminal SD85_03680 PF01709 Transcriptional regulator SD85_03690 PF00440 Bacterial regulatory proteins, tetR family SD85_03695 PF12680 SnoaL-like domain SD85_03700 PF01370 NAD dependent epimerase/dehydratase family SD85_03705 PF04909 Amidohydrolase SD85_03710 PF00440 Bacterial regulatory proteins, tetR family SD85_03715 PF11007 Spore coat associated protein JA (CotJA) SD85_03720 PF12652 CotJB protein SD85_03725 PF05067 Manganese containing catalase SD85_03730 PF00583 Acetyltransferase (GNAT) family SD85_03735 PF14150 YesK-like protein SD85_03740 PF04854 Protein of unknown function, DUF624 SD85_03745 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SD85_03745 PF00672 HAMP domain SD85_03745 PF02743 Cache domain SD85_03745 PF06580 Histidine kinase SD85_03750 PF00072 Response regulator receiver domain SD85_03750 PF12833 Helix-turn-helix domain SD85_03755 PF13416 Bacterial extracellular solute-binding protein SD85_03760 PF00528 Binding-protein-dependent transport system inner membrane component SD85_03765 PF00528 Binding-protein-dependent transport system inner membrane component SD85_03770 PF07470 Glycosyl Hydrolase Family 88 SD85_03775 PF12833 Helix-turn-helix domain SD85_03780 PF13472 GDSL-like Lipase/Acylhydrolase family SD85_03785 PF09224 Domain of unknown function (DUF1961) SD85_03790 PF04854 Protein of unknown function, DUF624 SD85_03795 PF18370 Rhamnogalacturonan I lyases beta-sheet domain SD85_03800 PF18370 Rhamnogalacturonan I lyases beta-sheet domain SD85_03800 PF01839 FG-GAP repeat SD85_03805 PF00657 GDSL-like Lipase/Acylhydrolase SD85_03810 PF02449 Beta-galactosidase SD85_03810 PF08533 Beta-galactosidase C-terminal domain SD85_03810 PF08532 Beta-galactosidase trimerisation domain SD85_03820 PF01547 Bacterial extracellular solute-binding protein SD85_03825 PF00528 Binding-protein-dependent transport system inner membrane component SD85_03830 PF00528 Binding-protein-dependent transport system inner membrane component SD85_03835 PF11975 Family 4 glycosyl hydrolase C-terminal domain SD85_03835 PF02056 Family 4 glycosyl hydrolase SD85_03840 PF04239 Protein of unknown function (DUF421) SD85_03845 PF03992 Antibiotic biosynthesis monooxygenase SD85_03850 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily SD85_03860 PF14361 RsbT co-antagonist protein rsbRD N-terminal domain SD85_03860 PF01740 STAS domain SD85_03865 PF10055 Uncharacterized small protein (DUF2292) SD85_03870 PF01027 Inhibitor of apoptosis-promoting Bax1 SD85_03875 PF01047 MarR family SD85_03880 PF01494 FAD binding domain SD85_03885 PF13037 Domain of unknown function (DUF3898) SD85_03885 PF13039 Protein of unknown function (DUF3900) SD85_03890 PF00067 Cytochrome P450 SD85_03890 PF00175 Oxidoreductase NAD-binding domain SD85_03890 PF00258 Flavodoxin SD85_03890 PF00667 FAD binding domain SD85_03895 PF00884 Sulfatase SD85_03900 PF00483 Nucleotidyl transferase SD85_03905 PF16363 GDP-mannose 4,6 dehydratase SD85_03910 PF03407 Nucleotide-diphospho-sugar transferase SD85_03915 PF00535 Glycosyl transferase family 2 SD85_03920 PF03407 Nucleotide-diphospho-sugar transferase SD85_03925 PF07690 Major Facilitator Superfamily SD85_03930 PF13419 Haloacid dehalogenase-like hydrolase SD85_03935 PF13520 Amino acid permease SD85_03940 PF00171 Aldehyde dehydrogenase family SD85_03945 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain SD85_03950 PF12848 ABC transporter SD85_03950 PF16326 ABC transporter C-terminal domain SD85_03950 PF00005 ABC transporter SD85_03955 PF10787 Uncharacterised protein from bacillus cereus group SD85_03960 PF13411 MerR HTH family regulatory protein SD85_03965 PF07690 Major Facilitator Superfamily SD85_03980 PF00005 ABC transporter SD85_03980 PF12848 ABC transporter SD85_03985 PF00270 DEAD/DEAH box helicase SD85_03985 PF00271 Helicase conserved C-terminal domain SD85_03990 PF00583 Acetyltransferase (GNAT) family SD85_03995 PF16884 N-terminal domain of oxidoreductase SD85_03995 PF00107 Zinc-binding dehydrogenase SD85_04000 PF00005 ABC transporter SD85_04005 PF01032 FecCD transport family SD85_04010 PF01032 FecCD transport family SD85_04015 PF01497 Periplasmic binding protein SD85_04020 PF11486 Protein of unknown function (DUF3212) SD85_04025 PF11181 Heat induced stress protein YflT SD85_04030 PF00544 Pectate lyase SD85_04035 PF00939 Sodium:sulfate symporter transmembrane region SD85_04040 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SD85_04040 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain SD85_04045 PF00072 Response regulator receiver domain SD85_04045 PF08279 HTH domain SD85_04045 PF12431 Transcriptional regulator SD85_04050 PF03401 Tripartite tricarboxylate transporter family receptor SD85_04055 PF03600 Citrate transporter SD85_04060 PF00753 Metallo-beta-lactamase superfamily SD85_04065 PF02898 Nitric oxide synthase, oxygenase domain SD85_04070 PF00708 Acylphosphatase SD85_04075 PF03475 3-alpha domain SD85_04075 PF03473 MOSC domain SD85_04080 PF11121 Protein of unknown function (DUF2639) SD85_04090 PF11588 Protein of unknown function (DUF3243) SD85_04095 PF00557 Metallopeptidase family M24 SD85_04100 PF00367 phosphotransferase system, EIIB SD85_04100 PF02378 Phosphotransferase system, EIIC SD85_04105 PF00884 Sulfatase SD85_04110 PF09350 Domain of unknown function (DUF1992) SD85_04115 PF01235 Sodium:alanine symporter family SD85_04120 PF03845 Spore germination protein SD85_04130 PF05504 Spore germination B3/ GerAC like, C-terminal SD85_04135 PF03323 Bacillus/Clostridium GerA spore germination protein SD85_04140 PF02378 Phosphotransferase system, EIIC SD85_04140 PF00367 phosphotransferase system, EIIB SD85_04145 PF16657 Maltogenic Amylase, C-terminal domain SD85_04145 PF00128 Alpha amylase, catalytic domain SD85_04150 PF00392 Bacterial regulatory proteins, gntR family SD85_04150 PF07702 UTRA domain SD85_04155 PF00881 Nitroreductase family SD85_04160 PF02872 5'-nucleotidase, C-terminal domain SD85_04160 PF00149 Calcineurin-like phosphoesterase SD85_04165 PF01965 DJ-1/PfpI family SD85_04170 PF07690 Major Facilitator Superfamily SD85_04175 PF06569 Protein of unknown function (DUF1128) SD85_04180 PF01451 Low molecular weight phosphotyrosine protein phosphatase SD85_04190 PF03631 Virulence factor BrkB SD85_04200 PF07690 Major Facilitator Superfamily SD85_04210 PF01699 Sodium/calcium exchanger protein SD85_04215 PF14167 YfkD-like protein SD85_04220 PF00924 Mechanosensitive ion channel SD85_04225 PF08756 YfkB-like domain SD85_04225 PF04055 Radical SAM superfamily SD85_04235 PF01522 Polysaccharide deacetylase SD85_04240 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase SD85_04240 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase SD85_04245 PF01544 CorA-like Mg2+ transporter protein SD85_04250 PF00730 HhH-GPD superfamily base excision DNA repair protein SD85_04260 PF05958 tRNA (Uracil-5-)-methyltransferase SD85_04260 PF01938 TRAM domain SD85_04265 PF01207 Dihydrouridine synthase (Dus) SD85_04270 PF13302 Acetyltransferase (GNAT) domain SD85_04285 PF00676 Dehydrogenase E1 component SD85_04290 PF02779 Transketolase, pyrimidine binding domain SD85_04290 PF02780 Transketolase, C-terminal domain SD85_04295 PF00364 Biotin-requiring enzyme SD85_04295 PF02817 e3 binding domain SD85_04295 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) SD85_04300 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain SD85_04300 PF07992 Pyridine nucleotide-disulphide oxidoreductase SD85_04305 PF02954 Bacterial regulatory protein, Fis family SD85_04305 PF01590 GAF domain SD85_04305 PF00158 Sigma-54 interaction domain SD85_04310 PF08141 Small acid-soluble spore protein H family SD85_04315 PF02694 Uncharacterised BCR, YnfA/UPF0060 family SD85_04320 PF17353 Family of unknown function (DUF5381) SD85_04335 PF06013 Proteins of 100 residues with WXG SD85_04340 PF02056 Family 4 glycosyl hydrolase SD85_04340 PF11975 Family 4 glycosyl hydrolase C-terminal domain SD85_04345 PF01418 Helix-turn-helix domain, rpiR family SD85_04345 PF01380 SIS domain SD85_04350 PF00367 phosphotransferase system, EIIB SD85_04350 PF02378 Phosphotransferase system, EIIC SD85_04355 PF00664 ABC transporter transmembrane region SD85_04355 PF00005 ABC transporter SD85_04360 PF00005 ABC transporter SD85_04360 PF00664 ABC transporter transmembrane region SD85_04365 PF07681 DoxX SD85_04370 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily SD85_04375 PF07730 Histidine kinase SD85_04380 PF00072 Response regulator receiver domain SD85_04380 PF00196 Bacterial regulatory proteins, luxR family SD85_04385 PF00005 ABC transporter SD85_04405 PF10400 Virulence activator alpha C-term SD85_04405 PF03551 Transcriptional regulator PadR-like family SD85_04410 PF01674 Lipase (class 2) SD85_04415 PF01757 Acyltransferase family SD85_04420 PF12867 DinB superfamily SD85_04425 PF07690 Major Facilitator Superfamily SD85_04430 PF01047 MarR family SD85_04435 PF09924 Uncharacterised conserved protein (DUF2156) SD85_04435 PF03706 Lysylphosphatidylglycerol synthase TM region SD85_04440 PF01497 Periplasmic binding protein SD85_04445 PF01032 FecCD transport family SD85_04450 PF01032 FecCD transport family SD85_04460 PF00881 Nitroreductase family SD85_04465 PF14151 YfhD-like protein SD85_04470 PF14152 YfhE-like protein SD85_04475 PF01370 NAD dependent epimerase/dehydratase family SD85_04475 PF08338 Domain of unknown function (DUF1731) SD85_04480 PF02631 RecX family SD85_04485 PF08838 Protein of unknown function (DUF1811) SD85_04495 PF07690 Major Facilitator Superfamily SD85_04500 PF08176 Small acid-soluble spore protein K family SD85_04505 PF14043 WVELL protein SD85_04510 PF08239 Bacterial SH3 domain SD85_04515 PF13630 SdpI/YhfL protein family SD85_04520 PF00561 alpha/beta hydrolase fold SD85_04525 PF00535 Glycosyl transferase family 2 SD85_04530 PF09586 Bacterial membrane protein YfhO SD85_04535 PF04307 LexA-binding, inner membrane-associated putative hydrolase SD85_04540 PF00730 HhH-GPD superfamily base excision DNA repair protein SD85_04540 PF14815 NUDIX domain SD85_04555 PF04259 Small, acid-soluble spore protein, gamma-type SD85_04560 PF14182 YgaB-like protein SD85_04565 PF04167 Protein of unknown function (DUF402) SD85_04570 PF00005 ABC transporter SD85_04570 PF00664 ABC transporter transmembrane region SD85_04575 PF06081 Aromatic acid exporter family member 1 SD85_04580 PF00202 Aminotransferase class-III SD85_04585 PF00578 AhpC/TSA family SD85_04590 PF01475 Ferric uptake regulator family SD85_04595 PF11023 Zinc-ribbon containing domain SD85_04600 PF14540 Nucleotidyltransferase-like SD85_04600 PF18576 Helix-turn-helix domain SD85_04710 PF07070 SpoOM protein SD85_04720 PF07875 Coat F domain SD85_04725 PF03575 Peptidase family S51 SD85_04730 PF01964 Radical SAM ThiC family SD85_04730 PF13667 ThiC-associated domain SD85_04735 PF13040 Fur-regulated basic protein B SD85_04740 PF06628 Catalase-related immune-responsive SD85_04740 PF00199 Catalase SD85_04745 PF00005 ABC transporter SD85_04750 PF09084 NMT1/THI5 like SD85_04755 PF00528 Binding-protein-dependent transport system inner membrane component SD85_04760 PF00296 Luciferase-like monooxygenase SD85_04770 PF00253 Ribosomal protein S14p/S29e SD85_04780 PF01381 Helix-turn-helix SD85_04795 PF08331 Domain of unknown function (DUF1730) SD85_04800 PF12671 Putative amidase domain SD85_04805 PF00588 SpoU rRNA Methylase family SD85_04810 PF13171 Protein of unknown function (DUF4004) SD85_04815 PF04519 Polymer-forming cytoskeletal SD85_04825 PF06798 PrkA serine protein kinase C-terminal domain SD85_04825 PF08298 PrkA AAA domain SD85_04830 PF04285 Protein of unknown function (DUF444) SD85_04835 PF01047 MarR family SD85_04845 PF07690 Major Facilitator Superfamily SD85_04850 PF03358 NADPH-dependent FMN reductase SD85_04865 PF00392 Bacterial regulatory proteins, gntR family SD85_04870 PF00005 ABC transporter SD85_04875 PF00005 ABC transporter SD85_04885 PF00313 'Cold-shock' DNA-binding domain SD85_04890 PF03180 NLPA lipoprotein SD85_04895 PF07694 5TMR of 5TMR-LYT SD85_04895 PF00990 Diguanylate cyclase, GGDEF domain SD85_04900 PF00375 Sodium:dicarboxylate symporter family SD85_04910 PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) SD85_04920 PF07875 Coat F domain SD85_04925 PF00746 LPXTG cell wall anchor motif SD85_04925 PF00565 Staphylococcal nuclease homologue SD85_04925 PF00149 Calcineurin-like phosphoesterase SD85_04925 PF02872 5'-nucleotidase, C-terminal domain SD85_04930 PF04203 Sortase domain SD85_04935 PF00849 RNA pseudouridylate synthase SD85_04935 PF01479 S4 domain SD85_04940 PF17326 Family of unknown function (DUF5365) SD85_04945 PF00571 CBS domain SD85_04950 PF13419 Haloacid dehalogenase-like hydrolase SD85_04955 PF00583 Acetyltransferase (GNAT) family SD85_04955 PF00795 Carbon-nitrogen hydrolase SD85_04965 PF00202 Aminotransferase class-III SD85_04970 PF04309 Glycerol-3-phosphate responsive antiterminator SD85_04975 PF00230 Major intrinsic protein SD85_04980 PF00370 FGGY family of carbohydrate kinases, N-terminal domain SD85_04980 PF02782 FGGY family of carbohydrate kinases, C-terminal domain SD85_04985 PF01266 FAD dependent oxidoreductase SD85_04985 PF16901 C-terminal domain of alpha-glycerophosphate oxidase SD85_04990 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I SD85_04990 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain SD85_04990 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III SD85_04990 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II SD85_04995 PF13185 GAF domain SD85_04995 PF07730 Histidine kinase SD85_05000 PF00072 Response regulator receiver domain SD85_05000 PF00196 Bacterial regulatory proteins, luxR family SD85_05005 PF03358 NADPH-dependent FMN reductase SD85_05010 PF14148 YhdB-like protein SD85_05015 PF13028 Protein of unknown function (DUF3889) SD85_05020 PF01476 LysM domain SD85_05020 PF00877 NlpC/P60 family SD85_05025 PF02082 Transcriptional regulator SD85_05030 PF05552 Conserved TM helix SD85_05035 PF04293 SpoVR like protein SD85_05040 PF00245 Alkaline phosphatase SD85_05045 PF00877 NlpC/P60 family SD85_05045 PF01476 LysM domain SD85_05050 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SD85_05050 PF03466 LysR substrate binding domain SD85_05055 PF00285 Citrate synthase, C-terminal domain SD85_05065 PF13520 Amino acid permease SD85_05070 PF00209 Sodium:neurotransmitter symporter family SD85_05075 PF00392 Bacterial regulatory proteins, gntR family SD85_05075 PF00155 Aminotransferase class I and II SD85_05080 PF00583 Acetyltransferase (GNAT) family SD85_05085 PF17453 Sigma-M inhibitor SD85_05090 PF13791 Sigma factor regulator C-terminal SD85_05090 PF13800 Sigma factor regulator N-terminal SD85_05095 PF08281 Sigma-70, region 4 SD85_05095 PF04542 Sigma-70 region 2 SD85_05100 PF00248 Aldo/keto reductase family SD85_05105 PF01553 Acyltransferase SD85_05110 PF01266 FAD dependent oxidoreductase SD85_05120 PF01595 Cyclin M transmembrane N-terminal domain SD85_05120 PF03471 Transporter associated domain SD85_05120 PF00571 CBS domain SD85_05125 PF13411 MerR HTH family regulatory protein SD85_05130 PF00155 Aminotransferase class I and II SD85_05135 PF00571 CBS domain SD85_05135 PF03471 Transporter associated domain SD85_05135 PF01595 Cyclin M transmembrane N-terminal domain SD85_05140 PF02537 CrcB-like protein, Camphor Resistance (CrcB) SD85_05145 PF02537 CrcB-like protein, Camphor Resistance (CrcB) SD85_05150 PF03009 Glycerophosphoryl diester phosphodiesterase family SD85_05155 PF17444 Uncharacterized YhdX-like SD85_05160 PF00924 Mechanosensitive ion channel SD85_05165 PF02146 Sir2 family SD85_05170 PF01522 Polysaccharide deacetylase SD85_05175 PF01063 Amino-transferase class IV SD85_05180 PF03553 Na+/H+ antiporter family SD85_05185 PF00582 Universal stress protein family SD85_05195 PF00664 ABC transporter transmembrane region SD85_05195 PF00005 ABC transporter SD85_05200 PF00005 ABC transporter SD85_05200 PF00664 ABC transporter transmembrane region SD85_05205 PF13460 NAD(P)H-binding SD85_05210 PF00269 Small, acid-soluble spore proteins, alpha/beta type SD85_05215 PF17277 Family of unknown function (DUF5342) SD85_05225 PF14398 YheC/D like ATP-grasp SD85_05230 PF14398 YheC/D like ATP-grasp SD85_05235 PF04286 Protein of unknown function (DUF445) SD85_05240 PF06133 Control of competence regulator ComK, YlbF/YmcA SD85_05245 PF08713 DNA alkylation repair enzyme SD85_05255 PF04055 Radical SAM superfamily SD85_05260 PF00999 Sodium/hydrogen exchanger family SD85_05265 PF02080 TrkA-C domain SD85_05275 PF00378 Enoyl-CoA hydratase/isomerase SD85_05280 PF14120 YhzD-like protein SD85_05285 PF13732 Domain of unknown function (DUF4162) SD85_05285 PF00005 ABC transporter SD85_05295 PF00149 Calcineurin-like phosphoesterase SD85_05300 PF13514 AAA domain SD85_05305 PF01966 HD domain SD85_05310 PF14147 Sporulation protein YhaL SD85_05320 PF09680 Family of unknown function SD85_05325 PF09680 Family of unknown function SD85_05330 PF11667 Putative zincin peptidase SD85_05335 PF08963 Protein of unknown function (DUF1878) SD85_05340 PF01047 MarR family SD85_05345 PF12732 YtxH-like protein SD85_05355 PF17099 Tryptophan transporter TrpP SD85_05360 PF00266 Aminotransferase class-V SD85_05365 PF01230 HIT domain SD85_05370 PF00005 ABC transporter SD85_05375 PF05975 Bacterial ABC transporter protein EcsB SD85_05380 PF12787 EcsC protein family SD85_05385 PF01546 Peptidase family M20/M25/M40 SD85_05385 PF07687 Peptidase dimerisation domain SD85_05400 PF03992 Antibiotic biosynthesis monooxygenase SD85_05405 PF00912 Transglycosylase SD85_05405 PF00905 Penicillin binding protein transpeptidase domain SD85_05410 PF01208 Uroporphyrinogen decarboxylase (URO-D) SD85_05425 PF17932 Tetracyclin repressor-like, C-terminal domain SD85_05425 PF00440 Bacterial regulatory proteins, tetR family SD85_05435 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal SD85_05435 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III SD85_05440 PF10086 YhfC intramembrane metalloprotease SD85_05450 PF05343 M42 glutamyl aminopeptidase SD85_05455 PF04266 ASCH domain SD85_05460 PF00375 Sodium:dicarboxylate symporter family SD85_05465 PF14149 YhfH-like protein SD85_05470 PF12706 Beta-lactamase superfamily domain SD85_05475 PF03099 Biotin/lipoate A/B protein ligase family SD85_05475 PF10437 Bacterial lipoate protein ligase C-terminus SD85_05480 PF13460 NAD(P)H-binding SD85_05485 PF13193 AMP-binding enzyme C-terminal domain SD85_05485 PF00501 AMP-binding enzyme SD85_05495 PF01435 Peptidase family M48 SD85_05495 PF16491 CAAX prenyl protease N-terminal, five membrane helices SD85_05500 PF00082 Subtilase family SD85_05500 PF05922 Peptidase inhibitor I9 SD85_05505 PF00583 Acetyltransferase (GNAT) family SD85_05510 PF00107 Zinc-binding dehydrogenase SD85_05510 PF08240 Alcohol dehydrogenase GroES-like domain SD85_05515 PF01497 Periplasmic binding protein SD85_05520 PF00300 Histidine phosphatase superfamily (branch 1) SD85_05525 PF02803 Thiolase, C-terminal domain SD85_05525 PF00108 Thiolase, N-terminal domain SD85_05530 PF13193 AMP-binding enzyme C-terminal domain SD85_05530 PF00501 AMP-binding enzyme SD85_05535 PF02632 BioY family SD85_05540 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain SD85_05545 PF01266 FAD dependent oxidoreductase SD85_05545 PF00355 Rieske [2Fe-2S] domain SD85_05555 PF08858 IDEAL domain SD85_05560 PF06338 ComK protein SD85_05570 PF05901 Excalibur calcium-binding domain SD85_05575 PF00474 Sodium:solute symporter family SD85_05580 PF11755 Protein of unknown function (DUF3311) SD85_05590 PF09335 SNARE associated Golgi protein SD85_05595 PF10502 Signal peptidase, peptidase S26 SD85_05600 PF01494 FAD binding domain SD85_05605 PF01047 MarR family SD85_05615 PF07690 Major Facilitator Superfamily SD85_05620 PF02894 Oxidoreductase family, C-terminal alpha/beta domain SD85_05620 PF01408 Oxidoreductase family, NAD-binding Rossmann fold SD85_05625 PF05116 Sucrose-6F-phosphate phosphohydrolase SD85_05630 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family SD85_05635 PF00356 Bacterial regulatory proteins, lacI family SD85_05640 PF05145 Transition state regulatory protein AbrB SD85_05645 PF07690 Major Facilitator Superfamily SD85_05650 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle SD85_05650 PF12793 Sugar transport-related sRNA regulator N-term SD85_05655 PF03860 Domain of Unknown Function (DUF326) SD85_05660 PF02915 Rubrerythrin SD85_05665 PF12705 PD-(D/E)XK nuclease superfamily SD85_05665 PF13361 UvrD-like helicase C-terminal domain SD85_05670 PF13361 UvrD-like helicase C-terminal domain SD85_05670 PF00580 UvrD/REP helicase N-terminal domain SD85_05670 PF12705 PD-(D/E)XK nuclease superfamily SD85_05675 PF00149 Calcineurin-like phosphoesterase SD85_05675 PF12320 Type 5 capsule protein repressor C-terminal domain SD85_05680 PF13476 AAA domain SD85_05690 PF10676 Spore germination protein gerPA/gerPF SD85_05695 PF10970 Spore germination protein GerPE SD85_05705 PF10737 Spore germination protein GerPC SD85_05710 PF10803 Spore germination GerPB SD85_05715 PF10676 Spore germination protein gerPA/gerPF SD85_05720 PF09388 Spo0E like sporulation regulatory protein SD85_05725 PF08757 CotH kinase protein SD85_05730 PF01557 Fumarylacetoacetate (FAA) hydrolase family SD85_05735 PF07457 Protein of unknown function (DUF1516) SD85_05740 PF00082 Subtilase family SD85_05740 PF17936 Bacterial Ig domain SD85_05745 PF10949 Protein of unknown function (DUF2777) SD85_05750 PF00733 Asparagine synthase SD85_05750 PF13537 Glutamine amidotransferase domain SD85_05755 PF05163 DinB family SD85_05765 PF01554 MatE SD85_05770 PF02311 AraC-like ligand binding domain SD85_05770 PF12833 Helix-turn-helix domain SD85_05775 PF00356 Bacterial regulatory proteins, lacI family SD85_05780 PF01408 Oxidoreductase family, NAD-binding Rossmann fold SD85_05780 PF02894 Oxidoreductase family, C-terminal alpha/beta domain SD85_05785 PF05163 DinB family SD85_05790 PF01810 LysE type translocator SD85_05795 PF00155 Aminotransferase class I and II SD85_05795 PF00392 Bacterial regulatory proteins, gntR family SD85_05800 PF13599 Pentapeptide repeats (9 copies) SD85_05805 PF08386 TAP-like protein SD85_05805 PF00561 alpha/beta hydrolase fold SD85_05815 PF01747 ATP-sulfurylase SD85_05815 PF14306 PUA-like domain SD85_05820 PF01507 Phosphoadenosine phosphosulfate reductase family SD85_05825 PF04029 2-phosphosulpholactate phosphatase SD85_05830 PF02679 (2R)-phospho-3-sulfolactate synthase (ComA) SD85_05835 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 SD85_05840 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain SD85_05840 PF13378 Enolase C-terminal domain-like SD85_05845 PF07690 Major Facilitator Superfamily SD85_05850 PF18014 Acetyltransferase (GNAT) domain SD85_05850 PF13673 Acetyltransferase (GNAT) domain SD85_05855 PF13673 Acetyltransferase (GNAT) domain SD85_05860 PF02219 Methylenetetrahydrofolate reductase SD85_05860 PF02574 Homocysteine S-methyltransferase SD85_05865 PF04461 Protein of unknown function (DUF520) SD85_05870 PF13509 S1 domain SD85_05870 PF17783 CvfB-like winged helix domain SD85_05875 PF12650 Domain of unknown function (DUF3784) SD85_05880 PF02645 Uncharacterised protein, DegV family COG1307 SD85_05885 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 SD85_05885 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) SD85_05890 PF12690 Intracellular proteinase inhibitor SD85_05895 PF12758 Protein of unknown function (DUF3813) SD85_05910 PF00326 Prolyl oligopeptidase family SD85_05915 PF01883 Iron-sulfur cluster assembly protein SD85_05925 PF01565 FAD binding domain SD85_05930 PF07690 Major Facilitator Superfamily SD85_05935 PF01118 Semialdehyde dehydrogenase, NAD binding domain SD85_05935 PF02774 Semialdehyde dehydrogenase, dimerisation domain SD85_05940 PF01960 ArgJ family SD85_05945 PF00696 Amino acid kinase family SD85_05950 PF00202 Aminotransferase class-III SD85_05955 PF00117 Glutamine amidotransferase class-I SD85_05955 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain SD85_05960 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain SD85_05960 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain SD85_05965 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain SD85_05965 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain SD85_05970 PF14168 YjzC-like protein SD85_05975 PF11151 Protein of unknown function (DUF2929) SD85_05990 PF02608 ABC transporter substrate-binding protein PnrA-like SD85_05995 PF10815 ComZ SD85_06005 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III SD85_06005 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal SD85_06010 PF00109 Beta-ketoacyl synthase, N-terminal domain SD85_06010 PF02801 Beta-ketoacyl synthase, C-terminal domain SD85_06015 PF10026 Predicted Zn-dependent protease (DUF2268) SD85_06020 PF00005 ABC transporter SD85_06020 PF08352 Oligopeptide/dipeptide transporter, C-terminal region SD85_06025 PF00005 ABC transporter SD85_06025 PF08352 Oligopeptide/dipeptide transporter, C-terminal region SD85_06030 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle SD85_06035 PF00528 Binding-protein-dependent transport system inner membrane component SD85_06040 PF12911 N-terminal TM domain of oligopeptide transport permease C SD85_06040 PF00528 Binding-protein-dependent transport system inner membrane component SD85_06045 PF12227 Protein of unknown function (DUF3603) SD85_06050 PF00579 tRNA synthetases class I (W and Y) SD85_06055 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle SD85_06060 PF00528 Binding-protein-dependent transport system inner membrane component SD85_06065 PF00528 Binding-protein-dependent transport system inner membrane component SD85_06065 PF12911 N-terminal TM domain of oligopeptide transport permease C SD85_06070 PF00005 ABC transporter SD85_06070 PF08352 Oligopeptide/dipeptide transporter, C-terminal region SD85_06075 PF08352 Oligopeptide/dipeptide transporter, C-terminal region SD85_06075 PF00005 ABC transporter SD85_06080 PF07690 Major Facilitator Superfamily SD85_06085 PF13508 Acetyltransferase (GNAT) domain SD85_06090 PF03960 ArsC family SD85_06095 PF03741 Integral membrane protein TerC family SD85_06100 PF05389 Negative regulator of genetic competence (MecA) SD85_06105 PF06054 Competence protein CoiA-like family SD85_06110 PF01432 Peptidase family M3 SD85_06110 PF08439 Oligopeptidase F SD85_06130 PF01152 Bacterial-like globin SD85_06135 PF01464 Transglycosylase SLT domain SD85_06140 PF01928 CYTH domain SD85_06150 PF04607 Region found in RelA / SpoT proteins SD85_06155 PF01513 ATP-NAD kinase SD85_06160 PF00849 RNA pseudouridylate synthase SD85_06165 PF00149 Calcineurin-like phosphoesterase SD85_06170 PF00999 Sodium/hydrogen exchanger family SD85_06170 PF02080 TrkA-C domain SD85_06170 PF02254 TrkA-N domain SD85_06175 PF03070 TENA/THI-4/PQQC family SD85_06180 PF02581 Thiamine monophosphate synthase SD85_06185 PF01266 FAD dependent oxidoreductase SD85_06190 PF02597 ThiS family SD85_06195 PF05690 Thiazole biosynthesis protein ThiG SD85_06200 PF00899 ThiF family SD85_06205 PF08543 Phosphomethylpyrimidine kinase SD85_06215 PF14153 Spore coat protein CotO SD85_06220 PF10612 Spore coat protein Z SD85_06225 PF10612 Spore coat protein Z SD85_06230 PF07552 Spore Coat Protein X and V domain SD85_06240 PF07552 Spore Coat Protein X and V domain SD85_06245 PF07098 Protein of unknown function (DUF1360) SD85_06265 PF14069 Stage VI sporulation protein F SD85_06270 PF13361 UvrD-like helicase C-terminal domain SD85_06270 PF00580 UvrD/REP helicase N-terminal domain SD85_06280 PF13673 Acetyltransferase (GNAT) domain SD85_06290 PF00756 Putative esterase SD85_06295 PF01053 Cys/Met metabolism PLP-dependent enzyme SD85_06300 PF01053 Cys/Met metabolism PLP-dependent enzyme SD85_06310 PF05684 Protein of unknown function (DUF819) SD85_06335 PF18801 response regulator aspartate phosphatase H, N terminal SD85_06335 PF13176 Tetratricopeptide repeat SD85_06355 PF08863 YolD-like protein SD85_06365 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 SD85_06365 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit SD85_06365 PF02378 Phosphotransferase system, EIIC SD85_06370 PF01238 Phosphomannose isomerase type I SD85_06390 PF04073 Aminoacyl-tRNA editing domain SD85_06395 PF13783 Domain of unknown function (DUF4177) SD85_06410 PF01040 UbiA prenyltransferase family SD85_06420 PF11738 Protein of unknown function (DUF3298) SD85_06420 PF13739 Deacetylase PdaC SD85_06420 PF01522 Polysaccharide deacetylase SD85_06425 PF10901 Protein of unknown function (DUF2690) SD85_06430 PF14070 Putative motility protein SD85_06440 PF10026 Predicted Zn-dependent protease (DUF2268) SD85_06445 PF10990 Protein of unknown function (DUF2809) SD85_06450 PF14172 Domain of unknown function (DUF4309) SD85_06455 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region SD85_06455 PF01568 Molydopterin dinucleotide binding domain SD85_06455 PF04879 Molybdopterin oxidoreductase Fe4S4 domain SD85_06455 PF12838 4Fe-4S dicluster domain SD85_06455 PF00384 Molybdopterin oxidoreductase SD85_06460 PF07849 Protein of unknown function (DUF1641) SD85_06465 PF11611 Domain of unknown function (DUF4352) SD85_06470 PF00293 NUDIX domain SD85_06480 PF00067 Cytochrome P450 SD85_06485 PF04101 Glycosyltransferase family 28 C-terminal domain SD85_06495 PF02602 Uroporphyrinogen-III synthase HemD SD85_06500 PF03649 Uncharacterised protein family (UPF0014) SD85_06505 PF00005 ABC transporter SD85_06510 PF13536 Putative multidrug resistance efflux transporter SD85_06520 PF07849 Protein of unknown function (DUF1641) SD85_06525 PF07992 Pyridine nucleotide-disulphide oxidoreductase SD85_06530 PF02614 Glucuronate isomerase SD85_06540 PF02615 Malate/L-lactate dehydrogenase SD85_06545 PF08240 Alcohol dehydrogenase GroES-like domain SD85_06545 PF00107 Zinc-binding dehydrogenase SD85_06550 PF03786 D-mannonate dehydratase (UxuA) SD85_06555 PF00106 short chain dehydrogenase SD85_06560 PF07690 Major Facilitator Superfamily SD85_06565 PF00356 Bacterial regulatory proteins, lacI family SD85_06570 PF01232 Mannitol dehydrogenase Rossmann domain SD85_06570 PF08125 Mannitol dehydrogenase C-terminal domain SD85_06575 PF08666 SAF domain SD85_06575 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus SD85_06580 PF01925 Sulfite exporter TauE/SafE SD85_06585 PF05163 DinB family SD85_06590 PF00004 ATPase family associated with various cellular activities (AAA) SD85_06595 PF18801 response regulator aspartate phosphatase H, N terminal SD85_06605 PF03795 YCII-related domain SD85_06610 PF01471 Putative peptidoglycan binding domain SD85_06610 PF01510 N-acetylmuramoyl-L-alanine amidase SD85_06610 PF01476 LysM domain SD85_06615 PF08000 Bacterial PH domain SD85_06620 PF05908 Poly-gamma-glutamate hydrolase SD85_06625 PF05067 Manganese containing catalase SD85_06630 PF06114 IrrE N-terminal-like domain SD85_06635 PF01381 Helix-turn-helix SD85_06650 PF01695 IstB-like ATP binding protein SD85_06670 PF17356 Phage-like element PBSX protein XtrA SD85_06675 PF08281 Sigma-70, region 4 SD85_06680 PF10668 Phage terminase small subunit SD85_06680 PF03592 Terminase small subunit SD85_06685 PF04466 Phage terminase large subunit SD85_06685 PF17288 Terminase RNAseH like domain SD85_06690 PF04860 Phage portal protein SD85_06695 PF14550 Putative phage serine protease XkdF SD85_06700 PF05065 Phage capsid family SD85_06705 PF11436 Protein of unknown function (DUF3199) SD85_06710 PF12206 Domain of unknown function (DUF3599) SD85_06715 PF04883 Bacteriophage HK97-gp10, putative tail-component SD85_06730 PF17481 Phage tail sheath protein beta-sandwich domain SD85_06730 PF17482 Phage tail sheath C-terminal domain SD85_06730 PF04984 Phage tail sheath protein subtilisin-like domain SD85_06735 PF09393 Phage tail tube protein SD85_06740 PF08890 Phage XkdN-like tail assembly chaperone protein, TAC SD85_06750 PF01464 Transglycosylase SLT domain SD85_06750 PF01464 Transglycosylase SLT domain SD85_06750 PF01464 Transglycosylase SLT domain SD85_06755 PF01476 LysM domain SD85_06765 PF10844 Protein of unknown function (DUF2577) SD85_06770 PF10934 Protein of unknown function (DUF2634) SD85_06775 PF04865 Baseplate J-like protein SD85_06780 PF10076 Uncharacterised protein conserved in bacteria (DUF2313) SD85_06795 PF09636 XkdW protein SD85_06800 PF09693 Phage uncharacterised protein (Phage_XkdX) SD85_06810 PF10779 Haemolysin XhlA SD85_06815 PF04688 SPP1 phage holin SD85_06820 PF01510 N-acetylmuramoyl-L-alanine amidase SD85_06820 PF01471 Putative peptidoglycan binding domain SD85_06820 PF01476 LysM domain SD85_06825 PF14185 Antitoxin SpoIISB, type II toxin-antitoxin system SD85_06830 PF14171 Toxin SpoIISA, type II toxin-antitoxin system SD85_06835 PF01384 Phosphate transporter family SD85_06840 PF01865 Protein of unknown function DUF47 SD85_06845 PF13520 Amino acid permease SD85_06850 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily SD85_06855 PF13231 Dolichyl-phosphate-mannose-protein mannosyltransferase SD85_06860 PF00535 Glycosyl transferase family 2 SD85_06870 PF13180 PDZ domain SD85_06875 PF03807 NADP oxidoreductase coenzyme F420-dependent SD85_06875 PF14748 Pyrroline-5-carboxylate reductase dimerisation SD85_06880 PF04951 D-aminopeptidase SD85_06885 PF00528 Binding-protein-dependent transport system inner membrane component SD85_06890 PF00528 Binding-protein-dependent transport system inner membrane component SD85_06890 PF12911 N-terminal TM domain of oligopeptide transport permease C SD85_06895 PF08352 Oligopeptide/dipeptide transporter, C-terminal region SD85_06895 PF00005 ABC transporter SD85_06900 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle SD85_06905 PF17676 LD-carboxypeptidase C-terminal domain SD85_06905 PF02016 LD-carboxypeptidase N-terminal domain SD85_06910 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain SD85_06910 PF13378 Enolase C-terminal domain-like SD85_06915 PF00877 NlpC/P60 family SD85_06920 PF00005 ABC transporter SD85_06920 PF08352 Oligopeptide/dipeptide transporter, C-terminal region SD85_06925 PF10282 Lactonase, 7-bladed beta-propeller SD85_06935 PF03061 Thioesterase superfamily SD85_06940 PF00042 Globin SD85_06940 PF00175 Oxidoreductase NAD-binding domain SD85_06940 PF00970 Oxidoreductase FAD-binding domain SD85_06950 PF04239 Protein of unknown function (DUF421) SD85_06955 PF12867 DinB superfamily SD85_06960 PF13302 Acetyltransferase (GNAT) domain SD85_06965 PF00893 Small Multidrug Resistance protein SD85_06970 PF00893 Small Multidrug Resistance protein SD85_06975 PF00551 Formyl transferase SD85_06975 PF01842 ACT domain SD85_06980 PF01472 PUA domain SD85_06980 PF00696 Amino acid kinase family SD85_06985 PF00171 Aldehyde dehydrogenase family SD85_06990 PF02566 OsmC-like protein SD85_06995 PF01047 MarR family SD85_07000 PF02566 OsmC-like protein SD85_07005 PF00535 Glycosyl transferase family 2 SD85_07005 PF13181 Tetratricopeptide repeat SD85_07010 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region SD85_07015 PF00300 Histidine phosphatase superfamily (branch 1) SD85_07020 PF01717 Cobalamin-independent synthase, Catalytic domain SD85_07020 PF08267 Cobalamin-independent synthase, N-terminal domain SD85_07025 PF00082 Subtilase family SD85_07030 PF01740 STAS domain SD85_07035 PF02361 Cobalt transport protein SD85_07040 PF00005 ABC transporter SD85_07045 PF09819 ABC-type cobalt transport system, permease component SD85_07050 PF07615 YKOF-related Family SD85_07055 PF00072 Response regulator receiver domain SD85_07055 PF00486 Transcriptional regulatory protein, C terminal SD85_07060 PF00512 His Kinase A (phospho-acceptor) domain SD85_07060 PF00672 HAMP domain SD85_07060 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SD85_07065 PF03413 Peptidase propeptide and YPEB domain SD85_07070 PF03413 Peptidase propeptide and YPEB domain SD85_07075 PF11132 Transcriptional regulator protein (SplA) SD85_07085 PF03448 MgtE intracellular N domain SD85_07085 PF00571 CBS domain SD85_07085 PF01769 Divalent cation transporter SD85_07090 PF13411 MerR HTH family regulatory protein SD85_07105 PF01047 MarR family SD85_07110 PF06925 Monogalactosyldiacylglycerol (MGDG) synthase SD85_07120 PF00149 Calcineurin-like phosphoesterase SD85_07130 PF00535 Glycosyl transferase family 2 SD85_07135 PF01068 ATP dependent DNA ligase domain SD85_07140 PF02735 Ku70/Ku80 beta-barrel domain SD85_07145 PF00990 Diguanylate cyclase, GGDEF domain SD85_07145 PF00563 EAL domain SD85_07145 PF03707 Bacterial signalling protein N terminal repeat SD85_07150 PF09335 SNARE associated Golgi protein SD85_07155 PF03741 Integral membrane protein TerC family SD85_07160 PF04542 Sigma-70 region 2 SD85_07170 PF00269 Small, acid-soluble spore proteins, alpha/beta type SD85_07175 PF08876 Domain of unknown function (DUF1836) SD85_07180 PF01435 Peptidase family M48 SD85_07185 PF02386 Cation transport protein SD85_07200 PF01757 Acyltransferase family SD85_07205 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SD85_07205 PF13426 PAS domain SD85_07205 PF13188 PAS domain SD85_07205 PF00512 His Kinase A (phospho-acceptor) domain SD85_07205 PF00989 PAS fold SD85_07210 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain SD85_07210 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain SD85_07220 PF01008 Initiation factor 2 subunit family SD85_07225 PF01636 Phosphotransferase enzyme family SD85_07230 PF00795 Carbon-nitrogen hydrolase SD85_07235 PF00155 Aminotransferase class I and II SD85_07240 PF02788 Ribulose bisphosphate carboxylase large chain, N-terminal domain SD85_07240 PF00016 Ribulose bisphosphate carboxylase large chain, catalytic domain SD85_07250 PF00596 Class II Aldolase and Adducin N-terminal domain SD85_07255 PF03079 ARD/ARD' family SD85_07260 PF06803 Protein of unknown function (DUF1232) SD85_07265 PF09388 Spo0E like sporulation regulatory protein SD85_07275 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SD85_07275 PF00512 His Kinase A (phospho-acceptor) domain SD85_07275 PF02743 Cache domain SD85_07280 PF01047 MarR family SD85_07285 PF13677 Membrane MotB of proton-channel complex MotA/MotB SD85_07285 PF00691 OmpA family SD85_07290 PF01618 MotA/TolQ/ExbB proton channel family SD85_07295 PF10431 C-terminal, D2-small domain, of ClpB protein SD85_07295 PF17871 AAA lid domain SD85_07295 PF07724 AAA domain (Cdc48 subfamily) SD85_07295 PF00004 ATPase family associated with various cellular activities (AAA) SD85_07305 PF06508 Queuosine biosynthesis protein QueC SD85_07310 PF01242 6-pyruvoyl tetrahydropterin synthase SD85_07315 PF04055 Radical SAM superfamily SD85_07320 PF14489 QueF-like protein SD85_07330 PF11514 Protein of unknown function (DUF3219) SD85_07335 PF09953 Uncharacterized protein conserved in bacteria (DUF2187) SD85_07350 PF07486 Cell Wall Hydrolase SD85_07355 PF01943 Polysaccharide biosynthesis protein SD85_07360 PF00578 AhpC/TSA family SD85_07375 PF00557 Metallopeptidase family M24 SD85_07375 PF01321 Creatinase/Prolidase N-terminal domain SD85_07385 PF00356 Bacterial regulatory proteins, lacI family SD85_07385 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family SD85_07390 PF03123 CAT RNA binding domain SD85_07390 PF00874 PRD domain SD85_07395 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 SD85_07395 PF02378 Phosphotransferase system, EIIC SD85_07395 PF00367 phosphotransferase system, EIIB SD85_07400 PF00381 PTS HPr component phosphorylation site SD85_07405 PF05524 PEP-utilising enzyme, N-terminal SD85_07405 PF02896 PEP-utilising enzyme, TIM barrel domain SD85_07405 PF00391 PEP-utilising enzyme, mobile domain SD85_07410 PF11132 Transcriptional regulator protein (SplA) SD85_07420 PF00583 Acetyltransferase (GNAT) family SD85_07425 PF02743 Cache domain SD85_07425 PF00672 HAMP domain SD85_07425 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain SD85_07430 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase SD85_07430 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase SD85_07435 PF00188 Cysteine-rich secretory protein family SD85_07440 PF03717 Penicillin-binding Protein dimerisation domain SD85_07440 PF00905 Penicillin binding protein transpeptidase domain SD85_07445 PF08447 PAS fold SD85_07445 PF00512 His Kinase A (phospho-acceptor) domain SD85_07445 PF00989 PAS fold SD85_07445 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SD85_07450 PF00155 Aminotransferase class I and II SD85_07460 PF00072 Response regulator receiver domain SD85_07460 PF01584 CheW-like domain SD85_07465 PF14177 YkyB-like protein SD85_07470 PF07690 Major Facilitator Superfamily SD85_07475 PF01476 LysM domain SD85_07475 PF03734 L,D-transpeptidase catalytic domain SD85_07480 PF00149 Calcineurin-like phosphoesterase SD85_07480 PF10518 TAT (twin-arginine translocation) pathway signal sequence SD85_07490 PF10388 EAL-domain associated signalling protein domain SD85_07490 PF00563 EAL domain SD85_07500 PF08796 Protein of unknown function (DUF1797) SD85_07505 PF04308 Ribonuclease H-like SD85_07510 PF14156 Antirepressor AbbA SD85_07520 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SD85_07520 PF03466 LysR substrate binding domain SD85_07525 PF00258 Flavodoxin SD85_07535 PF00258 Flavodoxin SD85_07540 PF00132 Bacterial transferase hexapeptide (six repeats) SD85_07540 PF14602 Hexapeptide repeat of succinyl-transferase SD85_07540 PF08503 Tetrahydrodipicolinate succinyltransferase N-terminal SD85_07545 PF01546 Peptidase family M20/M25/M40 SD85_07545 PF07687 Peptidase dimerisation domain SD85_07550 PF03698 Uncharacterised protein family (UPF0180) SD85_07555 PF00924 Mechanosensitive ion channel SD85_07560 PF10417 C-terminal domain of 1-Cys peroxiredoxin SD85_07560 PF00578 AhpC/TSA family SD85_07565 PF00578 AhpC/TSA family SD85_07580 PF12804 MobA-like NTP transferase domain SD85_07585 PF00899 ThiF family SD85_07590 PF03454 MoeA C-terminal region (domain IV) SD85_07590 PF00994 Probable molybdopterin binding domain SD85_07590 PF03453 MoeA N-terminal region (domain I and II) SD85_07595 PF03205 Molybdopterin guanine dinucleotide synthesis protein B SD85_07600 PF02391 MoaE protein SD85_07605 PF02597 ThiS family SD85_07610 PF00664 ABC transporter transmembrane region SD85_07610 PF00005 ABC transporter SD85_07615 PF00005 ABC transporter SD85_07615 PF00664 ABC transporter transmembrane region SD85_07620 PF04893 Yip1 domain SD85_07625 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion SD85_07630 PF00005 ABC transporter SD85_07635 PF02687 FtsX-like permease family SD85_07635 PF12704 MacB-like periplasmic core domain SD85_07640 PF00455 DeoR C terminal sensor domain SD85_07640 PF08220 DeoR-like helix-turn-helix domain SD85_07645 PF00294 pfkB family carbohydrate kinase SD85_07650 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 SD85_07650 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit SD85_07655 PF13276 HTH-like domain SD85_07655 PF00665 Integrase core domain SD85_07655 PF13333 Integrase core domain SD85_07665 PF10502 Signal peptidase, peptidase S26 SD85_07675 PF12848 ABC transporter SD85_07675 PF00005 ABC transporter SD85_07680 PF02558 Ketopantoate reductase PanE/ApbA SD85_07680 PF08546 Ketopantoate reductase PanE/ApbA C terminal SD85_07685 PF02073 Thermophilic metalloprotease (M29) SD85_07690 PF17447 Uncharacterized YkpC-like SD85_07700 PF18277 AbrB C-terminal domain SD85_07700 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin SD85_07705 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SD85_07705 PF00512 His Kinase A (phospho-acceptor) domain SD85_07705 PF00989 PAS fold SD85_07710 PF06094 Gamma-glutamyl cyclotransferase, AIG2-like SD85_07715 PF02254 TrkA-N domain SD85_07715 PF02080 TrkA-C domain SD85_07720 PF01979 Amidohydrolase family SD85_07720 PF13382 Adenine deaminase C-terminal domain SD85_07725 PF17770 Ribonuclease J C-terminal domain SD85_07725 PF00753 Metallo-beta-lactamase superfamily SD85_07725 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain SD85_07740 PF01327 Polypeptide deformylase SD85_07750 PF10368 Putative cell-wall binding lipoprotein SD85_07755 PF00676 Dehydrogenase E1 component SD85_07760 PF02779 Transketolase, pyrimidine binding domain SD85_07760 PF02780 Transketolase, C-terminal domain SD85_07765 PF00364 Biotin-requiring enzyme SD85_07765 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) SD85_07765 PF02817 e3 binding domain SD85_07770 PF07992 Pyridine nucleotide-disulphide oxidoreductase SD85_07770 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain SD85_07785 PF13333 Integrase core domain SD85_07785 PF00665 Integrase core domain SD85_07785 PF13276 HTH-like domain SD85_07790 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain SD85_07790 PF01276 Orn/Lys/Arg decarboxylase, major domain SD85_07795 PF05256 Uncharacterised protein family (UPF0223) SD85_07800 PF06335 Protein of unknown function (DUF1054) SD85_07810 PF00459 Inositol monophosphatase family SD85_07815 PF00583 Acetyltransferase (GNAT) family SD85_07820 PF04072 Leucine carboxyl methyltransferase SD85_07825 PF02868 Thermolysin metallopeptidase, alpha-helical domain SD85_07825 PF01447 Thermolysin metallopeptidase, catalytic domain SD85_07825 PF03413 Peptidase propeptide and YPEB domain SD85_07825 PF07504 Fungalysin/Thermolysin Propeptide Motif SD85_07840 PF04542 Sigma-70 region 2 SD85_07840 PF08281 Sigma-70, region 4 SD85_07845 PF13490 Putative zinc-finger SD85_07855 PF17259 Family of unknown function (DUF5325) SD85_07865 PF14036 YlaH-like protein SD85_07870 PF09963 Uncharacterized protein conserved in bacteria (DUF2197) SD85_07875 PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) SD85_07880 PF13638 PIN domain SD85_07880 PF02562 PhoH-like protein SD85_07890 PF04960 Glutaminase SD85_07895 PF07408 Protein of unknown function (DUF1507) SD85_07900 PF01098 Cell cycle protein SD85_07905 PF02436 Conserved carboxylase domain SD85_07905 PF00364 Biotin-requiring enzyme SD85_07905 PF02785 Biotin carboxylase C-terminal domain SD85_07905 PF00682 HMGL-like SD85_07905 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain SD85_07905 PF00289 Biotin carboxylase, N-terminal domain SD85_07910 PF02628 Cytochrome oxidase assembly protein SD85_07915 PF01040 UbiA prenyltransferase family SD85_07920 PF00116 Cytochrome C oxidase subunit II, periplasmic domain SD85_07920 PF02790 Cytochrome C oxidase subunit II, transmembrane domain SD85_07920 PF00034 Cytochrome c SD85_07925 PF00115 Cytochrome C and Quinol oxidase polypeptide I SD85_07930 PF00510 Cytochrome c oxidase subunit III SD85_07935 PF03626 Prokaryotic Cytochrome C oxidase subunit IV SD85_07940 PF09678 Cytochrome c oxidase caa3 assembly factor (Caa3_CtaG) SD85_07945 PF08868 YugN-like family SD85_07950 PF00571 CBS domain SD85_07955 PF14504 CAP-associated N-terminal SD85_07955 PF00188 Cysteine-rich secretory protein family SD85_07960 PF14071 Putative coat protein SD85_07965 PF14003 YlbE-like protein SD85_07970 PF06133 Control of competence regulator ComK, YlbF/YmcA SD85_07975 PF09902 Uncharacterized protein conserved in bacteria (DUF2129) SD85_07985 PF01467 Cytidylyltransferase-like SD85_07990 PF07670 Nucleoside recognition SD85_07995 PF01734 Patatin-like phospholipase SD85_08000 PF13180 PDZ domain SD85_08000 PF05362 Lon protease (S16) C-terminal proteolytic domain SD85_08005 PF05636 HIGH Nucleotidyl Transferase SD85_08010 PF02620 Large ribosomal RNA subunit accumulation protein YceD SD85_08015 PF01783 Ribosomal L32p protein family SD85_08025 PF00583 Acetyltransferase (GNAT) family SD85_08030 PF02558 Ketopantoate reductase PanE/ApbA SD85_08030 PF08546 Ketopantoate reductase PanE/ApbA C terminal SD85_08035 PF10079 Bacillithiol biosynthesis BshC SD85_08040 PF02381 MraZ protein, putative antitoxin-like SD85_08045 PF01795 MraW methylase family SD85_08065 PF00905 Penicillin binding protein transpeptidase domain SD85_08065 PF03793 PASTA domain SD85_08065 PF03717 Penicillin-binding Protein dimerisation domain SD85_08075 PF01225 Mur ligase family, catalytic domain SD85_08075 PF02875 Mur ligase family, glutamate ligase domain SD85_08075 PF08245 Mur ligase middle domain SD85_08085 PF00953 Glycosyl transferase family 4 SD85_08085 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 SD85_08090 PF08245 Mur ligase middle domain SD85_08090 PF02875 Mur ligase family, glutamate ligase domain SD85_08095 PF01098 Cell cycle protein SD85_08100 PF03033 Glycosyltransferase family 28 N-terminal domain SD85_08100 PF04101 Glycosyltransferase family 28 C-terminal domain SD85_08105 PF01565 FAD binding domain SD85_08105 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain SD85_08110 PF08478 POTRA domain, FtsQ-type SD85_08115 PF05949 Bacterial protein of unknown function (DUF881) SD85_08120 PF05949 Bacterial protein of unknown function (DUF881) SD85_08125 PF06947 Protein of unknown function (DUF1290) SD85_08130 PF02491 SHS2 domain inserted in FTSA SD85_08135 PF00091 Tubulin/FtsZ family, GTPase domain SD85_08135 PF12327 FtsZ family, C-terminal domain SD85_08140 PF05922 Peptidase inhibitor I9 SD85_08140 PF00082 Subtilase family SD85_08145 PF03419 Sporulation factor SpoIIGA SD85_08150 PF04545 Sigma-70, region 4 SD85_08150 PF04542 Sigma-70 region 2 SD85_08155 PF04545 Sigma-70, region 4 SD85_08155 PF04539 Sigma-70 region 3 SD85_08155 PF04542 Sigma-70 region 2 SD85_08160 PF00005 ABC transporter SD85_08165 PF07687 Peptidase dimerisation domain SD85_08165 PF01546 Peptidase family M20/M25/M40 SD85_08170 PF05239 PRC-barrel domain SD85_08180 PF01168 Alanine racemase, N-terminal domain SD85_08185 PF04472 Cell division protein SepF SD85_08190 PF02325 YGGT family SD85_08195 PF01479 S4 domain SD85_08195 PF17774 Putative RNA-binding domain in YlmH SD85_08200 PF05103 DivIVA protein SD85_08205 PF08264 Anticodon-binding domain of tRNA SD85_08205 PF00133 tRNA synthetases class I (I, L, M and V) SD85_08210 PF01258 Prokaryotic dksA/traR C4-type zinc finger SD85_08215 PF01252 Signal peptidase (SPase) II SD85_08220 PF01479 S4 domain SD85_08220 PF00849 RNA pseudouridylate synthase SD85_08225 PF00156 Phosphoribosyl transferase domain SD85_08230 PF00860 Permease family SD85_08235 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain SD85_08235 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain SD85_08240 PF01979 Amidohydrolase family SD85_08245 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain SD85_08245 PF00117 Glutamine amidotransferase class-I SD85_08250 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain SD85_08250 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain SD85_08250 PF02142 MGS-like domain SD85_08255 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B SD85_08255 PF00175 Oxidoreductase NAD-binding domain SD85_08260 PF01180 Dihydroorotate dehydrogenase SD85_08265 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family SD85_08270 PF00156 Phosphoribosyl transferase domain SD85_08280 PF01507 Phosphoadenosine phosphosulfate reductase family SD85_08285 PF01384 Phosphate transporter family SD85_08290 PF14306 PUA-like domain SD85_08290 PF01747 ATP-sulfurylase SD85_08300 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases SD85_08305 PF01903 CbiX SD85_08320 PF00690 Cation transporter/ATPase, N-terminus SD85_08320 PF00689 Cation transporting ATPase, C-terminus SD85_08325 PF08340 Domain of unknown function (DUF1732) SD85_08325 PF03755 YicC-like family, N-terminal region SD85_08330 PF04025 Domain of unknown function (DUF370) SD85_08335 PF00625 Guanylate kinase SD85_08340 PF01192 RNA polymerase Rpb6 SD85_08345 PF02441 Flavoprotein SD85_08345 PF04127 DNA / pantothenate metabolism flavoprotein SD85_08350 PF04851 Type III restriction enzyme, res subunit SD85_08350 PF18319 PriA DNA helicase Cys-rich region (CRR) domain SD85_08350 PF17764 3′ DNA-binding domain (3′BD) SD85_08350 PF00271 Helicase conserved C-terminal domain SD85_08350 PF18074 Primosomal protein N C-terminal domain SD85_08355 PF01327 Polypeptide deformylase SD85_08360 PF02911 Formyl transferase, C-terminal domain SD85_08360 PF00551 Formyl transferase SD85_08365 PF01029 NusB family SD85_08365 PF01189 16S rRNA methyltransferase RsmB/F SD85_08370 PF04055 Radical SAM superfamily SD85_08380 PF03793 PASTA domain SD85_08380 PF00069 Protein kinase domain SD85_08385 PF16745 RsgA N-terminal domain SD85_08385 PF03193 RsgA GTPase SD85_08390 PF00834 Ribulose-phosphate 3 epimerase family SD85_08395 PF04265 Thiamin pyrophosphokinase, vitamin B1 binding domain SD85_08395 PF04263 Thiamin pyrophosphokinase, catalytic domain SD85_08400 PF08183 Stage V sporulation protein family SD85_08405 PF00830 Ribosomal L28 family SD85_08410 PF03780 Asp23 family, cell envelope-related function SD85_08415 PF02734 DAK2 domain SD85_08415 PF13684 Dihydroxyacetone kinase family SD85_08420 PF03315 Serine dehydratase beta chain SD85_08420 PF01842 ACT domain SD85_08425 PF03313 Serine dehydratase alpha chain SD85_08430 PF00270 DEAD/DEAH box helicase SD85_08430 PF17191 RecG wedge domain SD85_08430 PF00271 Helicase conserved C-terminal domain SD85_08435 PF03061 Thioesterase superfamily SD85_08440 PF02504 Fatty acid synthesis protein SD85_08445 PF00698 Acyl transferase domain SD85_08455 PF00550 Phosphopantetheine attachment site SD85_08460 PF00035 Double-stranded RNA binding motif SD85_08460 PF14622 Ribonuclease-III-like SD85_08465 PF06470 SMC proteins Flexible Hinge Domain SD85_08465 PF02463 RecF/RecN/SMC N terminal domain SD85_08470 PF00448 SRP54-type protein, GTPase domain SD85_08470 PF02881 SRP54-type protein, helical bundle domain SD85_08480 PF13276 HTH-like domain SD85_08480 PF13333 Integrase core domain SD85_08480 PF00665 Integrase core domain SD85_08485 PF02369 Bacterial Ig-like domain (group 1) SD85_08490 PF04297 Putative helix-turn-helix protein, YlxM / p13 like SD85_08495 PF02978 Signal peptide binding domain SD85_08495 PF00448 SRP54-type protein, GTPase domain SD85_08495 PF02881 SRP54-type protein, helical bundle domain SD85_08500 PF00886 Ribosomal protein S16 SD85_08510 PF11068 YlqD protein SD85_08515 PF01782 RimM N-terminal domain SD85_08515 PF05239 PRC-barrel domain SD85_08520 PF01746 tRNA (Guanine-1)-methyltransferase SD85_08525 PF01245 Ribosomal protein L19 SD85_08530 PF01926 50S ribosome-binding GTPase SD85_08535 PF01351 Ribonuclease HII SD85_08545 PF01312 FlhB HrpN YscU SpaS Family SD85_08550 PF00549 CoA-ligase SD85_08550 PF08442 ATP-grasp domain SD85_08555 PF00549 CoA-ligase SD85_08555 PF02629 CoA binding domain SD85_08560 PF02481 DNA recombination-mediator protein A SD85_08565 PF01131 DNA topoisomerase SD85_08565 PF01396 Topoisomerase DNA binding C4 zinc finger SD85_08565 PF01751 Toprim domain SD85_08570 PF01134 Glucose inhibited division protein A SD85_08575 PF02899 Phage integrase, N-terminal SAM-like domain SD85_08575 PF00589 Phage integrase family SD85_08580 PF00227 Proteasome subunit SD85_08590 PF06018 CodY GAF-like domain SD85_08590 PF08222 CodY helix-turn-helix domain SD85_08595 PF00460 Flagella basal body rod protein SD85_08600 PF00460 Flagella basal body rod protein SD85_08600 PF06429 Flagellar basal body rod FlgEFG protein C-terminal SD85_08605 PF02049 Flagellar hook-basal body complex protein FliE SD85_08610 PF08345 Flagellar M-ring protein C-terminal SD85_08610 PF01514 Secretory protein of YscJ/FliF family SD85_08615 PF01706 FliG C-terminal domain SD85_08615 PF14841 FliG middle domain SD85_08615 PF14842 FliG N-terminal domain SD85_08620 PF02108 Flagellar assembly protein FliH SD85_08625 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain SD85_08625 PF02874 ATP synthase alpha/beta family, beta-barrel domain SD85_08625 PF18269 T3SS EscN ATPase C-terminal domain SD85_08630 PF02050 Flagellar FliJ protein SD85_08635 PF03448 MgtE intracellular N domain SD85_08640 PF02120 Flagellar hook-length control protein FliK SD85_08645 PF03963 Flagellar hook capping protein - N-terminal region SD85_08650 PF06429 Flagellar basal body rod FlgEFG protein C-terminal SD85_08650 PF00460 Flagella basal body rod protein SD85_08655 PF06289 Flagellar and Swarming motility proteins SD85_08660 PF03748 Flagellar basal body-associated protein FliL SD85_08665 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term SD85_08665 PF02154 Flagellar motor switch protein FliM SD85_08670 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term SD85_08670 PF04509 CheC-like family SD85_08675 PF00072 Response regulator receiver domain SD85_08680 PF04347 Flagellar biosynthesis protein, FliO SD85_08685 PF00813 FliP family SD85_08690 PF01313 Bacterial export proteins, family 3 SD85_08695 PF01311 Bacterial export proteins, family 1 SD85_08700 PF01312 FlhB HrpN YscU SpaS Family SD85_08705 PF00771 FHIPEP family SD85_08710 PF00448 SRP54-type protein, GTPase domain SD85_08715 PF10609 NUBPL iron-transfer P-loop NTPase SD85_08720 PF01339 CheB methylesterase SD85_08720 PF00072 Response regulator receiver domain SD85_08725 PF01627 Hpt domain SD85_08725 PF07194 P2 response regulator binding domain SD85_08725 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SD85_08725 PF02895 Signal transducing histidine kinase, homodimeric domain SD85_08725 PF01584 CheW-like domain SD85_08730 PF01584 CheW-like domain SD85_08735 PF04509 CheC-like family SD85_08740 PF03975 CheD chemotactic sensory transduction SD85_08745 PF04545 Sigma-70, region 4 SD85_08745 PF04539 Sigma-70 region 3 SD85_08745 PF04542 Sigma-70 region 2 SD85_08755 PF00318 Ribosomal protein S2 SD85_08760 PF00889 Elongation factor TS SD85_08765 PF00696 Amino acid kinase family SD85_08770 PF01765 Ribosome recycling factor SD85_08775 PF01255 Putative undecaprenyl diphosphate synthase SD85_08785 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain SD85_08785 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase SD85_08785 PF13288 DXP reductoisomerase C-terminal domain SD85_08790 PF17820 PDZ domain SD85_08790 PF02163 Peptidase family M50 SD85_08795 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) SD85_08795 PF04073 Aminoacyl-tRNA editing domain SD85_08795 PF03129 Anticodon binding domain SD85_08800 PF14480 DNA polymerase III polC-type N-terminus I SD85_08800 PF17657 Bacterial DNA polymerase III alpha subunit finger domain SD85_08800 PF07733 Bacterial DNA polymerase III alpha NTPase domain SD85_08800 PF11490 DNA polymerase III polC-type N-terminus II SD85_08800 PF14579 Helix-hairpin-helix motif SD85_08800 PF00929 Exonuclease SD85_08800 PF02811 PHP domain SD85_08805 PF02576 RimP N-terminal domain SD85_08805 PF17384 RimP C-terminal SH3 domain SD85_08810 PF08529 NusA N-terminal domain SD85_08810 PF13184 NusA-like KH domain SD85_08810 PF00575 S1 RNA binding domain SD85_08815 PF04296 Protein of unknown function (DUF448) SD85_08820 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family SD85_08825 PF00009 Elongation factor Tu GTP binding domain SD85_08825 PF04760 Translation initiation factor IF-2, N-terminal region SD85_08825 PF11987 Translation-initiation factor 2 SD85_08830 PF04456 Protein of unknown function (DUF503) SD85_08835 PF02033 Ribosome-binding factor A SD85_08840 PF01509 TruB family pseudouridylate synthase (N terminal domain) SD85_08840 PF16198 tRNA pseudouridylate synthase B C-terminal domain SD85_08845 PF06574 FAD synthetase SD85_08845 PF01687 Riboflavin kinase SD85_08850 PF00312 Ribosomal protein S15 SD85_08855 PF01138 3' exoribonuclease family, domain 1 SD85_08855 PF00575 S1 RNA binding domain SD85_08855 PF00013 KH domain SD85_08855 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain SD85_08855 PF03725 3' exoribonuclease family, domain 2 SD85_08860 PF01522 Polysaccharide deacetylase SD85_08865 PF05193 Peptidase M16 inactive domain SD85_08865 PF00675 Insulinase (Peptidase family M16) SD85_08870 PF05239 PRC-barrel domain SD85_08875 PF16924 Dipicolinate synthase subunit A N-terminal domain SD85_08875 PF01262 Alanine dehydrogenase/PNT, C-terminal domain SD85_08880 PF02441 Flavoprotein SD85_08885 PF02774 Semialdehyde dehydrogenase, dimerisation domain SD85_08885 PF01118 Semialdehyde dehydrogenase, NAD binding domain SD85_08890 PF13840 ACT domain SD85_08890 PF00696 Amino acid kinase family SD85_08895 PF00701 Dihydrodipicolinate synthetase family SD85_08900 PF17770 Ribonuclease J C-terminal domain SD85_08900 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain SD85_08900 PF00753 Metallo-beta-lactamase superfamily SD85_08905 PF00574 Clp protease SD85_08910 PF14035 YlzJ-like protein SD85_08915 PF01580 FtsK/SpoIIIE family SD85_08915 PF17854 FtsK alpha domain SD85_08915 PF09397 Ftsk gamma domain SD85_08920 PF00392 Bacterial regulatory proteins, gntR family SD85_08920 PF07702 UTRA domain SD85_08925 PF07690 Major Facilitator Superfamily SD85_08930 PF05193 Peptidase M16 inactive domain SD85_08935 PF05193 Peptidase M16 inactive domain SD85_08935 PF00675 Insulinase (Peptidase family M16) SD85_08945 PF11588 Protein of unknown function (DUF3243) SD85_08950 PF11868 Protein of unknown function (DUF3388) SD85_08955 PF13464 Domain of unknown function (DUF4115) SD85_08960 PF01066 CDP-alcohol phosphatidyltransferase SD85_08965 PF02464 Competence-damaged protein SD85_08965 PF18146 Damage-inducible protein CinA KH domain SD85_08965 PF00994 Probable molybdopterin binding domain SD85_08970 PF00154 recA bacterial DNA recombination protein SD85_08975 PF00144 Beta-lactamase SD85_08980 PF00013 KH domain SD85_08980 PF01966 HD domain SD85_08980 PF12072 Domain of unknown function (DUF3552) SD85_08985 PF13277 YmdB-like protein SD85_08990 PF04232 Stage V sporulation protein S (SpoVS) SD85_08995 PF08240 Alcohol dehydrogenase GroES-like domain SD85_08995 PF00107 Zinc-binding dehydrogenase SD85_09000 PF00155 Aminotransferase class I and II SD85_09005 PF01938 TRAM domain SD85_09005 PF04055 Radical SAM superfamily SD85_09005 PF00919 Uncharacterized protein family UPF0004 SD85_09010 PF06133 Control of competence regulator ComK, YlbF/YmcA SD85_09015 PF10628 Outer spore coat protein E (CotE) SD85_09020 PF05190 MutS family domain IV SD85_09020 PF05192 MutS domain III SD85_09020 PF05188 MutS domain II SD85_09020 PF01624 MutS domain I SD85_09020 PF00488 MutS domain V SD85_09025 PF01119 DNA mismatch repair protein, C-terminal domain SD85_09025 PF08676 MutL C terminal dimerisation domain SD85_09035 PF14184 Regulatory protein YrvL SD85_09050 PF13977 BetI-type transcriptional repressor, C-terminal SD85_09050 PF00440 Bacterial regulatory proteins, tetR family SD85_09055 PF00753 Metallo-beta-lactamase superfamily SD85_09065 PF00698 Acyl transferase domain SD85_09070 PF00698 Acyl transferase domain SD85_09075 PF03060 Nitronate monooxygenase SD85_09075 PF00698 Acyl transferase domain SD85_09080 PF00550 Phosphopantetheine attachment site SD85_09085 PF02801 Beta-ketoacyl synthase, C-terminal domain SD85_09085 PF00109 Beta-ketoacyl synthase, N-terminal domain SD85_09090 PF08540 Hydroxymethylglutaryl-coenzyme A synthase C terminal SD85_09090 PF01154 Hydroxymethylglutaryl-coenzyme A synthase N terminal SD85_09095 PF00378 Enoyl-CoA hydratase/isomerase SD85_09100 PF00378 Enoyl-CoA hydratase/isomerase SD85_09105 PF00550 Phosphopantetheine attachment site SD85_09105 PF13193 AMP-binding enzyme C-terminal domain SD85_09105 PF00109 Beta-ketoacyl synthase, N-terminal domain SD85_09105 PF16197 Ketoacyl-synthetase C-terminal extension SD85_09105 PF00501 AMP-binding enzyme SD85_09105 PF08659 KR domain SD85_09105 PF02801 Beta-ketoacyl synthase, C-terminal domain SD85_09105 PF14765 Polyketide synthase dehydratase SD85_09105 PF00668 Condensation domain SD85_09110 PF16197 Ketoacyl-synthetase C-terminal extension SD85_09110 PF00109 Beta-ketoacyl synthase, N-terminal domain SD85_09110 PF14765 Polyketide synthase dehydratase SD85_09110 PF02801 Beta-ketoacyl synthase, C-terminal domain SD85_09110 PF08659 KR domain SD85_09110 PF00550 Phosphopantetheine attachment site SD85_09115 PF16197 Ketoacyl-synthetase C-terminal extension SD85_09115 PF00550 Phosphopantetheine attachment site SD85_09115 PF08242 Methyltransferase domain SD85_09115 PF08659 KR domain SD85_09115 PF02801 Beta-ketoacyl synthase, C-terminal domain SD85_09115 PF00109 Beta-ketoacyl synthase, N-terminal domain SD85_09115 PF14765 Polyketide synthase dehydratase SD85_09120 PF14765 Polyketide synthase dehydratase SD85_09120 PF08659 KR domain SD85_09120 PF02801 Beta-ketoacyl synthase, C-terminal domain SD85_09120 PF00109 Beta-ketoacyl synthase, N-terminal domain SD85_09120 PF16197 Ketoacyl-synthetase C-terminal extension SD85_09120 PF00668 Condensation domain SD85_09120 PF13193 AMP-binding enzyme C-terminal domain SD85_09120 PF00501 AMP-binding enzyme SD85_09120 PF00550 Phosphopantetheine attachment site SD85_09125 PF08242 Methyltransferase domain SD85_09125 PF14765 Polyketide synthase dehydratase SD85_09125 PF00550 Phosphopantetheine attachment site SD85_09125 PF02801 Beta-ketoacyl synthase, C-terminal domain SD85_09125 PF00109 Beta-ketoacyl synthase, N-terminal domain SD85_09125 PF16197 Ketoacyl-synthetase C-terminal extension SD85_09125 PF00975 Thioesterase domain SD85_09130 PF00067 Cytochrome P450 SD85_09145 PF00082 Subtilase family SD85_09155 PF05908 Poly-gamma-glutamate hydrolase SD85_09160 PF02566 OsmC-like protein SD85_09165 PF00893 Small Multidrug Resistance protein SD85_09170 PF00893 Small Multidrug Resistance protein SD85_09180 PF12788 YmaF family SD85_09190 PF17209 Hfq protein SD85_09195 PF14157 YmzC-like protein SD85_09205 PF07972 NrdI Flavodoxin like SD85_09210 PF00317 Ribonucleotide reductase, all-alpha domain SD85_09210 PF02867 Ribonucleotide reductase, barrel domain SD85_09210 PF08343 Ribonucleotide reductase N-terminal SD85_09215 PF00268 Ribonucleotide reductase, small chain SD85_09225 PF01520 N-acetylmuramoyl-L-alanine amidase SD85_09225 PF05036 Sporulation related domain SD85_09235 PF17866 AAA lid domain SD85_09235 PF00004 ATPase family associated with various cellular activities (AAA) SD85_09245 PF01926 50S ribosome-binding GTPase SD85_09245 PF13167 GTP-binding GTPase N-terminal SD85_09245 PF16360 GTP-binding GTPase Middle Region SD85_09250 PF06838 Methionine gamma-lyase SD85_09255 PF13411 MerR HTH family regulatory protein SD85_09260 PF03951 Glutamine synthetase, beta-Grasp domain SD85_09260 PF00120 Glutamine synthetase, catalytic domain SD85_09280 PF04616 Glycosyl hydrolases family 43 SD85_09280 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain SD85_09285 PF00480 ROK family SD85_09290 PF01261 Xylose isomerase-like TIM barrel SD85_09295 PF00370 FGGY family of carbohydrate kinases, N-terminal domain SD85_09295 PF02782 FGGY family of carbohydrate kinases, C-terminal domain SD85_09300 PF00457 Glycosyl hydrolases family 11 SD85_09310 PF00083 Sugar (and other) transporter SD85_09315 PF01168 Alanine racemase, N-terminal domain SD85_09315 PF00842 Alanine racemase, C-terminal domain SD85_09320 PF10903 Protein of unknown function (DUF2691) SD85_09325 PF00692 dUTPase SD85_09340 PF00303 Thymidylate synthase SD85_09345 PF15493 Domain of unknown function, YrpD SD85_09350 PF14037 YoqO-like protein SD85_09375 PF08327 Activator of Hsp90 ATPase homolog 1-like protein SD85_09390 PF02417 Chromate transporter SD85_09395 PF03323 Bacillus/Clostridium GerA spore germination protein SD85_09405 PF13761 Domain of unknown function (DUF4166) SD85_09410 PF14158 YndJ-like protein SD85_09420 PF05908 Poly-gamma-glutamate hydrolase SD85_09425 PF10710 Protein of unknown function (DUF2512) SD85_09430 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily SD85_09445 PF00717 Peptidase S24-like SD85_09445 PF01726 LexA DNA binding domain SD85_09450 PF01476 LysM domain SD85_09455 PF00239 Resolvase, N terminal domain SD85_09460 PF05979 Bacterial protein of unknown function (DUF896) SD85_09465 PF02780 Transketolase, C-terminal domain SD85_09465 PF02779 Transketolase, pyrimidine binding domain SD85_09465 PF00456 Transketolase, thiamine diphosphate binding domain SD85_09470 PF10747 Sporulation inhibitor of replication protein SirA SD85_09475 PF03672 Uncharacterised protein family (UPF0154) SD85_09480 PF09388 Spo0E like sporulation regulatory protein SD85_09485 PF02683 Cytochrome C biogenesis protein transmembrane region SD85_09490 PF00072 Response regulator receiver domain SD85_09495 PF07301 Protein of unknown function (DUF1453) SD85_09500 PF11084 Protein of unknown function (DUF2621) SD85_09510 PF08179 Small acid-soluble spore protein P family SD85_09520 PF00694 Aconitase C-terminal domain SD85_09520 PF00330 Aconitase family (aconitate hydratase) SD85_09525 PF00578 AhpC/TSA family SD85_09530 PF13040 Fur-regulated basic protein B SD85_09535 PF08177 Small acid-soluble spore protein N family SD85_09545 PF03061 Thioesterase superfamily SD85_09555 PF01521 Iron-sulphur cluster biosynthesis SD85_09560 PF02660 Glycerol-3-phosphate acyltransferase SD85_09565 PF13380 CoA binding domain SD85_09570 PF00986 DNA gyrase B subunit, carboxyl terminus SD85_09570 PF00204 DNA gyrase B SD85_09570 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SD85_09570 PF01751 Toprim domain SD85_09575 PF03989 DNA gyrase C-terminal domain, beta-propeller SD85_09575 PF00521 DNA gyrase/topoisomerase IV, subunit A SD85_09590 PF01235 Sodium:alanine symporter family SD85_09595 PF00942 Cellulose binding domain SD85_09595 PF00150 Cellulase (glycosyl hydrolase family 5) SD85_09600 PF17452 Uncharacterized YnfE-like SD85_09605 PF04138 GtrA-like protein SD85_09610 PF00483 Nucleotidyl transferase SD85_09615 PF09335 SNARE associated Golgi protein SD85_09630 PF08863 YolD-like protein SD85_09640 PF01039 Carboxyl transferase domain SD85_09645 PF00378 Enoyl-CoA hydratase/isomerase SD85_09650 PF00682 HMGL-like SD85_09655 PF00364 Biotin-requiring enzyme SD85_09660 PF00289 Biotin carboxylase, N-terminal domain SD85_09660 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain SD85_09660 PF02785 Biotin carboxylase C-terminal domain SD85_09665 PF00501 AMP-binding enzyme SD85_09665 PF13193 AMP-binding enzyme C-terminal domain SD85_09670 PF02771 Acyl-CoA dehydrogenase, N-terminal domain SD85_09670 PF02770 Acyl-CoA dehydrogenase, middle domain SD85_09670 PF00441 Acyl-CoA dehydrogenase, C-terminal domain SD85_09685 PF02638 Glycosyl hydrolase-like 10 SD85_09690 PF07098 Protein of unknown function (DUF1360) SD85_09695 PF00501 AMP-binding enzyme SD85_09695 PF00668 Condensation domain SD85_09695 PF13193 AMP-binding enzyme C-terminal domain SD85_09695 PF00550 Phosphopantetheine attachment site SD85_09695 PF00975 Thioesterase domain SD85_09700 PF00550 Phosphopantetheine attachment site SD85_09700 PF00668 Condensation domain SD85_09700 PF13193 AMP-binding enzyme C-terminal domain SD85_09700 PF00501 AMP-binding enzyme SD85_09705 PF00202 Aminotransferase class-III SD85_09705 PF00550 Phosphopantetheine attachment site SD85_09705 PF00501 AMP-binding enzyme SD85_09705 PF13193 AMP-binding enzyme C-terminal domain SD85_09705 PF02801 Beta-ketoacyl synthase, C-terminal domain SD85_09705 PF00109 Beta-ketoacyl synthase, N-terminal domain SD85_09705 PF00668 Condensation domain SD85_09705 PF16197 Ketoacyl-synthetase C-terminal extension SD85_09710 PF00698 Acyl transferase domain SD85_09715 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family SD85_09720 PF01263 Aldose 1-epimerase SD85_09725 PF01554 MatE SD85_09730 PF16800 IseA DL-endopeptidase inhibitor SD85_09750 PF01476 LysM domain SD85_09750 PF01510 N-acetylmuramoyl-L-alanine amidase SD85_09750 PF01471 Putative peptidoglycan binding domain SD85_09755 PF04688 SPP1 phage holin SD85_09760 PF10960 BhlA holin family SD85_09785 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase SD85_09785 PF05257 CHAP domain SD85_09900 PF00589 Phage integrase family SD85_09920 PF00145 C-5 cytosine-specific DNA methylase SD85_09940 PF17356 Phage-like element PBSX protein XtrA SD85_09970 PF01381 Helix-turn-helix SD85_09995 PF00589 Phage integrase family SD85_10000 PF12728 Helix-turn-helix domain SD85_10010 PF03466 LysR substrate binding domain SD85_10010 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SD85_10020 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster SD85_10020 PF07992 Pyridine nucleotide-disulphide oxidoreductase SD85_10025 PF00310 Glutamine amidotransferases class-II SD85_10025 PF04898 Glutamate synthase central domain SD85_10025 PF01493 GXGXG motif SD85_10025 PF01645 Conserved region in glutamate synthase SD85_10030 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SD85_10030 PF03466 LysR substrate binding domain SD85_10035 PF00696 Amino acid kinase family SD85_10035 PF01472 PUA domain SD85_10040 PF14748 Pyrroline-5-carboxylate reductase dimerisation SD85_10040 PF03807 NADP oxidoreductase coenzyme F420-dependent SD85_10045 PF02334 Replication terminator protein SD85_10050 PF00067 Cytochrome P450 SD85_10055 PF00106 short chain dehydrogenase SD85_10060 PF06103 Bacterial protein of unknown function (DUF948) SD85_10070 PF13302 Acetyltransferase (GNAT) domain SD85_10095 PF07690 Major Facilitator Superfamily SD85_10100 PF02782 FGGY family of carbohydrate kinases, C-terminal domain SD85_10100 PF00370 FGGY family of carbohydrate kinases, N-terminal domain SD85_10105 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain SD85_10105 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain SD85_10110 PF01568 Molydopterin dinucleotide binding domain SD85_10110 PF00384 Molybdopterin oxidoreductase SD85_10110 PF04879 Molybdopterin oxidoreductase Fe4S4 domain SD85_10125 PF17094 Uncharacterised protein family (UPF0715) SD85_10135 PF13217 Protein of unknown function (DUF4025) SD85_10140 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain SD85_10140 PF00672 HAMP domain SD85_10140 PF05227 CHASE3 domain SD85_10145 PF03241 4-hydroxyphenylacetate 3-hydroxylase C terminal SD85_10145 PF11794 4-hydroxyphenylacetate 3-hydroxylase N terminal SD85_10150 PF03330 Lytic transglycolase SD85_10155 PF06912 Protein of unknown function (DUF1275) SD85_10160 PF00544 Pectate lyase SD85_10165 PF00106 short chain dehydrogenase SD85_10180 PF02586 SOS response associated peptidase (SRAP) SD85_10195 PF16302 Domain of unknown function (DUF4944) SD85_10220 PF04294 VanW like protein SD85_10225 PF11188 Protein of unknown function (DUF2975) SD85_10230 PF13443 Cro/C1-type HTH DNA-binding domain SD85_10235 PF05675 Protein of unknown function (DUF817) SD85_10240 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SD85_10240 PF03466 LysR substrate binding domain SD85_10245 PF00892 EamA-like transporter family SD85_10270 PF01965 DJ-1/PfpI family SD85_10285 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading SD85_10285 PF18416 N-acetylglucosamine binding protein domain 2 SD85_10290 PF05163 DinB family SD85_10295 PF13302 Acetyltransferase (GNAT) domain SD85_10300 PF18801 response regulator aspartate phosphatase H, N terminal SD85_10300 PF13176 Tetratricopeptide repeat SD85_10310 PF11799 impB/mucB/samB family C-terminal domain SD85_10310 PF00817 impB/mucB/samB family SD85_10310 PF11798 IMS family HHH motif SD85_10315 PF00535 Glycosyl transferase family 2 SD85_10355 PF00589 Phage integrase family SD85_10355 PF02899 Phage integrase, N-terminal SAM-like domain SD85_10370 PF00722 Glycosyl hydrolases family 16 SD85_10375 PF09346 SMI1 / KNR4 family (SUKH-1) SD85_10380 PF01593 Flavin containing amine oxidoreductase SD85_10385 PF01588 Putative tRNA binding domain SD85_10390 PF07883 Cupin domain SD85_10390 PF12833 Helix-turn-helix domain SD85_10395 PF00583 Acetyltransferase (GNAT) family SD85_10405 PF00440 Bacterial regulatory proteins, tetR family SD85_10405 PF13305 Tetracyclin repressor-like, C-terminal domain SD85_10415 PF06445 GyrI-like small molecule binding domain SD85_10420 PF13280 WYL domain SD85_10420 PF08279 HTH domain SD85_10430 PF01022 Bacterial regulatory protein, arsR family SD85_10440 PF04238 Protein of unknown function (DUF420) SD85_10445 PF18846 Bacterial archaeo-eukaryotic release factor family 5 SD85_10455 PF17676 LD-carboxypeptidase C-terminal domain SD85_10455 PF02016 LD-carboxypeptidase N-terminal domain SD85_10460 PF00487 Fatty acid desaturase SD85_10465 PF07730 Histidine kinase SD85_10470 PF00072 Response regulator receiver domain SD85_10470 PF00196 Bacterial regulatory proteins, luxR family SD85_10475 PF00474 Sodium:solute symporter family SD85_10480 PF06725 3D domain SD85_10480 PF01476 LysM domain SD85_10485 PF16124 RecQ zinc-binding SD85_10485 PF09382 RQC domain SD85_10485 PF00270 DEAD/DEAH box helicase SD85_10485 PF00271 Helicase conserved C-terminal domain SD85_10485 PF00570 HRDC domain SD85_10490 PF02525 Flavodoxin-like fold SD85_10495 PF01258 Prokaryotic dksA/traR C4-type zinc finger SD85_10500 PF08000 Bacterial PH domain SD85_10510 PF00171 Aldehyde dehydrogenase family SD85_10515 PF13249 Squalene-hopene cyclase N-terminal domain SD85_10515 PF13243 Squalene-hopene cyclase C-terminal domain SD85_10520 PF02777 Iron/manganese superoxide dismutases, C-terminal domain SD85_10520 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain SD85_10525 PF00209 Sodium:neurotransmitter symporter family SD85_10530 PF01758 Sodium Bile acid symporter family SD85_10535 PF02817 e3 binding domain SD85_10535 PF00364 Biotin-requiring enzyme SD85_10535 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) SD85_10540 PF16870 2-oxoglutarate dehydrogenase C-terminal SD85_10540 PF02779 Transketolase, pyrimidine binding domain SD85_10540 PF00676 Dehydrogenase E1 component SD85_10545 PF00092 von Willebrand factor type A domain SD85_10550 PF07728 AAA domain (dynein-related subfamily) SD85_10555 PF00080 Copper/zinc superoxide dismutase (SODC) SD85_10555 PF13627 Prokaryotic lipoprotein-attachment site SD85_10560 PF00877 NlpC/P60 family SD85_10560 PF01476 LysM domain SD85_10565 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase SD85_10570 PF10372 Bacterial membrane-spanning protein N-terminus SD85_10570 PF02457 DisA bacterial checkpoint controller nucleotide-binding SD85_10575 PF01554 MatE SD85_10580 PF01740 STAS domain SD85_10585 PF02585 GlcNAc-PI de-N-acetylase SD85_10590 PF08830 Protein of unknown function (DUF1806) SD85_10600 PF00892 EamA-like transporter family SD85_10615 PF14552 Tautomerase enzyme SD85_10620 PF01638 HxlR-like helix-turn-helix SD85_10625 PF00881 Nitroreductase family SD85_10630 PF01738 Dienelactone hydrolase family SD85_10640 PF11755 Protein of unknown function (DUF3311) SD85_10645 PF00474 Sodium:solute symporter family SD85_10650 PF03572 Peptidase family S41 SD85_10650 PF01471 Putative peptidoglycan binding domain SD85_10650 PF17820 PDZ domain SD85_10655 PF08241 Methyltransferase domain SD85_10665 PF02557 D-alanyl-D-alanine carboxypeptidase SD85_10670 PF01048 Phosphorylase superfamily SD85_10680 PF14191 YodL-like SD85_10685 PF01569 PAP2 superfamily SD85_10690 PF14162 YozD-like protein SD85_10705 PF06855 YozE SAM-like fold SD85_10710 PF14122 YokU-like protein, putative antitoxin SD85_10715 PF12544 Lysine-2,3-aminomutase SD85_10720 PF00583 Acetyltransferase (GNAT) family SD85_10725 PF01546 Peptidase family M20/M25/M40 SD85_10725 PF07687 Peptidase dimerisation domain SD85_10730 PF01144 Coenzyme A transferase SD85_10735 PF01144 Coenzyme A transferase SD85_10740 PF00202 Aminotransferase class-III SD85_10755 PF00583 Acetyltransferase (GNAT) family SD85_10760 PF00535 Glycosyl transferase family 2 SD85_10775 PF12996 DUF based on E. rectale Gene description (DUF3880) SD85_10780 PF02333 Phytase SD85_10785 PF08485 Polysaccharide biosynthesis protein C-terminal SD85_10785 PF02719 Polysaccharide biosynthesis protein SD85_10790 PF01641 SelR domain SD85_10795 PF01625 Peptide methionine sulfoxide reductase SD85_10800 PF01047 MarR family SD85_10805 PF01554 MatE SD85_10810 PF17431 Uncharacterized YmpT-like SD85_10815 PF09911 Uncharacterized protein conserved in bacteria (DUF2140) SD85_10820 PF13472 GDSL-like Lipase/Acylhydrolase family SD85_10825 PF02630 SCO1/SenC SD85_10835 PF10751 Protein of unknown function (DUF2535) SD85_10840 PF00585 C-terminal regulatory domain of Threonine dehydratase SD85_10840 PF00291 Pyridoxal-phosphate dependent enzyme SD85_10845 PF00158 Sigma-54 interaction domain SD85_10845 PF08461 Ribonuclease R winged-helix domain SD85_10850 PF03006 Haemolysin-III related SD85_10860 PF00186 Dihydrofolate reductase SD85_10865 PF00303 Thymidylate synthase SD85_10870 PF04608 Phosphatidylglycerophosphatase A SD85_10875 PF14005 YpjP-like protein SD85_10880 PF04445 Putative SAM-dependent methyltransferase SD85_10885 PF06491 Disulphide isomerase SD85_10890 PF00920 Dehydratase family SD85_10895 PF08712 Scaffold protein Nfu/NifU N terminal SD85_10895 PF13769 Virulence factor SD85_10900 PF01966 HD domain SD85_10905 PF00255 Glutathione peroxidase SD85_10910 PF04204 Homoserine O-succinyltransferase SD85_10915 PF00534 Glycosyl transferases group 1 SD85_10915 PF06925 Monogalactosyldiacylglycerol (MGDG) synthase SD85_10920 PF00313 'Cold-shock' DNA-binding domain SD85_10930 PF10819 Protein of unknown function (DUF2564) SD85_10935 PF10782 Zinc-finger SD85_10940 PF13456 Reverse transcriptase-like SD85_10945 PF02592 Putative vitamin uptake transporter SD85_10950 PF13456 Reverse transcriptase-like SD85_10960 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain SD85_10960 PF01367 5'-3' exonuclease, C-terminal SAM fold SD85_10970 PF10752 Protein of unknown function (DUF2533) SD85_10975 PF00350 Dynamin family SD85_10980 PF04140 Isoprenylcysteine carboxyl methyltransferase (ICMT) family SD85_10985 PF02797 Chalcone and stilbene synthases, C-terminal domain SD85_10985 PF00195 Chalcone and stilbene synthases, N-terminal domain SD85_10990 PF00860 Permease family SD85_10995 PF00156 Phosphoribosyl transferase domain SD85_11000 PF02074 Carboxypeptidase Taq (M32) metallopeptidase SD85_11005 PF03812 2-keto-3-deoxygluconate permease SD85_11010 PF01081 KDPG and KHG aldolase SD85_11015 PF00294 pfkB family carbohydrate kinase SD85_11020 PF00356 Bacterial regulatory proteins, lacI family SD85_11025 PF04962 KduI/IolB family SD85_11035 PF13307 Helicase C-terminal domain SD85_11045 PF02926 THUMP domain SD85_11045 PF01170 Putative RNA methylase family UPF0020 SD85_11050 PF05103 DivIVA protein SD85_11055 PF06908 YspA SLOG family SD85_11060 PF11122 Inner spore coat protein D SD85_11070 PF13482 RNase_H superfamily SD85_11075 PF09369 Domain of unknown function (DUF1998) SD85_11075 PF00271 Helicase conserved C-terminal domain SD85_11075 PF00270 DEAD/DEAH box helicase SD85_11080 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 SD85_11090 PF14179 YppG-like protein SD85_11095 PF14178 YppF-like protein SD85_11100 PF08807 Bacterial domain of unknown function (DUF1798) SD85_11105 PF17522 Family of unknown function (DUF5446) SD85_11115 PF10720 Protein of unknown function (DUF2515) SD85_11120 PF03838 Recombination protein U SD85_11125 PF00905 Penicillin binding protein transpeptidase domain SD85_11125 PF00912 Transglycosylase SD85_11135 PF10576 Iron-sulfur binding domain of endonuclease III SD85_11135 PF00633 Helix-hairpin-helix motif SD85_11135 PF00730 HhH-GPD superfamily base excision DNA repair protein SD85_11140 PF07261 Replication initiation and membrane attachment SD85_11145 PF00152 tRNA synthetases class II (D, K and N) SD85_11145 PF01336 OB-fold nucleic acid binding domain SD85_11150 PF00155 Aminotransferase class I and II SD85_11155 PF03413 Peptidase propeptide and YPEB domain SD85_11155 PF17881 Domain of unknown function (DUF5590) SD85_11160 PF14084 Protein of unknown function (DUF4264) SD85_11165 PF13307 Helicase C-terminal domain SD85_11165 PF00929 Exonuclease SD85_11165 PF04851 Type III restriction enzyme, res subunit SD85_11170 PF02261 Aspartate decarboxylase SD85_11175 PF02569 Pantoate-beta-alanine ligase SD85_11180 PF02548 Ketopantoate hydroxymethyltransferase SD85_11185 PF03099 Biotin/lipoate A/B protein ligase family SD85_11185 PF02237 Biotin protein ligase C terminal domain SD85_11185 PF08279 HTH domain SD85_11190 PF13735 tRNA nucleotidyltransferase domain 2 putative SD85_11190 PF12627 Probable RNA and SrmB- binding site of polymerase A SD85_11190 PF01743 Poly A polymerase head domain SD85_11195 PF00534 Glycosyl transferases group 1 SD85_11195 PF13439 Glycosyltransferase Family 4 SD85_11200 PF02585 GlcNAc-PI de-N-acetylase SD85_11205 PF02142 MGS-like domain SD85_11210 PF05173 Dihydrodipicolinate reductase, C-terminus SD85_11210 PF01113 Dihydrodipicolinate reductase, N-terminus SD85_11215 PF03819 MazG nucleotide pyrophosphohydrolase domain SD85_11220 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 SD85_11220 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) SD85_11225 PF09577 Sporulation protein YpjB (SpoYpjB) SD85_11230 PF07187 Protein of unknown function (DUF1405) SD85_11235 PF13442 Cytochrome C oxidase, cbb3-type, subunit III SD85_11235 PF00032 Cytochrome b(C-terminal)/b6/petD SD85_11240 PF00033 Cytochrome b/b6/petB SD85_11245 PF00355 Rieske [2Fe-2S] domain SD85_11250 PF10673 Protein of unknown function (DUF2487) SD85_11255 PF08864 UPF0302 domain SD85_11255 PF08858 IDEAL domain SD85_11265 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) SD85_11270 PF02153 Prephenate dehydrogenase SD85_11270 PF01842 ACT domain SD85_11275 PF00155 Aminotransferase class I and II SD85_11280 PF00290 Tryptophan synthase alpha chain SD85_11285 PF00291 Pyridoxal-phosphate dependent enzyme SD85_11290 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase SD85_11295 PF00218 Indole-3-glycerol phosphate synthase SD85_11300 PF02885 Glycosyl transferase family, helical bundle domain SD85_11300 PF00591 Glycosyl transferase family, a/b domain SD85_11305 PF00425 chorismate binding enzyme SD85_11305 PF04715 Anthranilate synthase component I, N terminal region SD85_11310 PF07736 Chorismate mutase type I SD85_11315 PF01761 3-dehydroquinate synthase SD85_11320 PF01264 Chorismate synthase SD85_11325 PF03705 CheR methyltransferase, all-alpha domain SD85_11325 PF01739 CheR methyltransferase, SAM binding domain SD85_11335 PF00334 Nucleoside diphosphate kinase SD85_11340 PF00348 Polyprenyl synthetase SD85_11345 PF01209 ubiE/COQ5 methyltransferase family SD85_11350 PF07307 Heptaprenyl diphosphate synthase (HEPPP synthase) subunit 1 SD85_11355 PF02081 Tryptophan RNA-binding attenuator protein SD85_11360 PF01227 GTP cyclohydrolase I SD85_11365 PF00216 Bacterial DNA-binding protein SD85_11370 PF09547 Stage IV sporulation protein A (spore_IV_A) SD85_11380 PF10966 Protein of unknown function (DUF2768) SD85_11385 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus SD85_11385 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus SD85_11390 PF01926 50S ribosome-binding GTPase SD85_11390 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal SD85_11400 PF14045 YIEGIA protein SD85_11410 PF14140 YpzI-like protein SD85_11415 PF01070 FMN-dependent dehydrogenase SD85_11420 PF00575 S1 RNA binding domain SD85_11425 PF02224 Cytidylate kinase SD85_11430 PF17313 Family of unknown function (DUF5359) SD85_11435 PF12945 Flagellar protein YcgR SD85_11435 PF07238 PilZ domain SD85_11440 PF14620 YpeB sporulation SD85_11440 PF03413 Peptidase propeptide and YPEB domain SD85_11445 PF07486 Cell Wall Hydrolase SD85_11445 PF01471 Putative peptidoglycan binding domain SD85_11450 PF13367 PrsW family intramembrane metalloprotease SD85_11460 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain SD85_11460 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase SD85_11465 PF05389 Negative regulator of genetic competence (MecA) SD85_11470 PF00149 Calcineurin-like phosphoesterase SD85_11475 PF10864 Protein of unknown function (DUF2663) SD85_11480 PF01476 LysM domain SD85_11485 PF02517 CPBP intramembrane metalloprotease SD85_11490 PF00270 DEAD/DEAH box helicase SD85_11490 PF00271 Helicase conserved C-terminal domain SD85_11495 PF14493 Helix-turn-helix domain SD85_11505 PF12822 ECF transporter, substrate-specific component SD85_11515 PF01842 ACT domain SD85_11515 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain SD85_11515 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain SD85_11520 PF01487 Type I 3-dehydroquinase SD85_11530 PF08281 Sigma-70, region 4 SD85_11530 PF04542 Sigma-70 region 2 SD85_11535 PF18698 Histidine kinase sensor domain SD85_11535 PF00672 HAMP domain SD85_11535 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SD85_11535 PF00512 His Kinase A (phospho-acceptor) domain SD85_11535 PF00989 PAS fold SD85_11540 PF00072 Response regulator receiver domain SD85_11540 PF00486 Transcriptional regulatory protein, C terminal SD85_11545 PF01578 Cytochrome C assembly protein SD85_11550 PF05140 ResB-like family SD85_11555 PF00578 AhpC/TSA family SD85_11560 PF01479 S4 domain SD85_11560 PF00849 RNA pseudouridylate synthase SD85_11565 PF07670 Nucleoside recognition SD85_11570 PF07670 Nucleoside recognition SD85_11575 PF00768 D-alanyl-D-alanine carboxypeptidase SD85_11575 PF07943 Penicillin-binding protein 5, C-terminal domain SD85_11580 PF13047 Protein of unknown function (DUF3907) SD85_11585 PF04079 Segregation and condensation complex subunit ScpB SD85_11590 PF02616 Segregation and condensation protein ScpA SD85_11595 PF03745 Domain of unknown function (DUF309) SD85_11600 PF00583 Acetyltransferase (GNAT) family SD85_11605 PF00885 6,7-dimethyl-8-ribityllumazine synthase SD85_11610 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase SD85_11610 PF00925 GTP cyclohydrolase II SD85_11615 PF00677 Lumazine binding domain SD85_11620 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region SD85_11620 PF01872 RibD C-terminal domain SD85_11630 PF10502 Signal peptidase, peptidase S26 SD85_11635 PF09855 Nucleic-acid-binding protein containing Zn-ribbon domain (DUF2082) SD85_11645 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD SD85_11655 PF06207 Protein of unknown function (DUF1002) SD85_11660 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain SD85_11660 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain SD85_11665 PF03323 Bacillus/Clostridium GerA spore germination protein SD85_11670 PF14097 Stage V sporulation protein AE1 SD85_11675 PF03862 SpoVAC/SpoVAEB sporulation membrane protein SD85_11680 PF07451 Stage V sporulation protein AD (SpoVAD) SD85_11685 PF03862 SpoVAC/SpoVAEB sporulation membrane protein SD85_11690 PF13782 Stage V sporulation protein AB SD85_11695 PF12164 Stage V sporulation protein AA SD85_11700 PF04545 Sigma-70, region 4 SD85_11700 PF04539 Sigma-70 region 3 SD85_11700 PF04542 Sigma-70 region 2 SD85_11705 PF13581 Histidine kinase-like ATPase domain SD85_11710 PF01740 STAS domain SD85_11715 PF00768 D-alanyl-D-alanine carboxypeptidase SD85_11715 PF07943 Penicillin-binding protein 5, C-terminal domain SD85_11720 PF01048 Phosphorylase superfamily SD85_11725 PF01676 Metalloenzyme superfamily SD85_11730 PF02899 Phage integrase, N-terminal SAM-like domain SD85_11730 PF00589 Phage integrase family SD85_11735 PF14004 Protein of unknown function (DUF4227) SD85_11740 PF01475 Ferric uptake regulator family SD85_11745 PF01944 Stage II sporulation protein M SD85_11755 PF00390 Malic enzyme, N-terminal domain SD85_11755 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain SD85_11755 PF03949 Malic enzyme, NAD binding domain SD85_11760 PF03553 Na+/H+ antiporter family SD85_11765 PF00206 Lyase SD85_11765 PF10415 Fumarase C C-terminus SD85_11770 PF00710 Asparaginase, N-terminal SD85_11770 PF17763 Glutaminase/Asparaginase C-terminal domain SD85_11775 PF01381 Helix-turn-helix SD85_11785 PF13276 HTH-like domain SD85_11785 PF00665 Integrase core domain SD85_11785 PF13333 Integrase core domain SD85_11795 PF00293 NUDIX domain SD85_11800 PF13072 Mother cell inhibitor of FtsZ SD85_11805 PF00248 Aldo/keto reductase family SD85_11810 PF13025 Protein of unknown function (DUF3886) SD85_11815 PF12146 Serine aminopeptidase, S33 SD85_11820 PF01098 Cell cycle protein SD85_11825 PF01098 Cell cycle protein SD85_11830 PF06803 Protein of unknown function (DUF1232) SD85_11835 PF10827 Protein of unknown function (DUF2552) SD85_11840 PF01521 Iron-sulphur cluster biosynthesis SD85_11845 PF13673 Acetyltransferase (GNAT) domain SD85_11845 PF04229 GrpB protein SD85_11850 PF03992 Antibiotic biosynthesis monooxygenase SD85_11855 PF00583 Acetyltransferase (GNAT) family SD85_11860 PF08863 YolD-like protein SD85_11865 PF11799 impB/mucB/samB family C-terminal domain SD85_11865 PF00817 impB/mucB/samB family SD85_11870 PF14164 YqzH-like protein SD85_11880 PF07690 Major Facilitator Superfamily SD85_11895 PF00485 Phosphoribulokinase / Uridine kinase family SD85_11900 PF00291 Pyridoxal-phosphate dependent enzyme SD85_11905 PF00106 short chain dehydrogenase SD85_11910 PF00753 Metallo-beta-lactamase superfamily SD85_11915 PF03807 NADP oxidoreductase coenzyme F420-dependent SD85_11915 PF14748 Pyrroline-5-carboxylate reductase dimerisation SD85_11920 PF01546 Peptidase family M20/M25/M40 SD85_11925 PF00724 NADH:flavin oxidoreductase / NADH oxidase family SD85_11930 PF12146 Serine aminopeptidase, S33 SD85_11945 PF00471 Ribosomal protein L33 SD85_11950 PF12706 Beta-lactamase superfamily domain SD85_11955 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain SD85_11955 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain SD85_11960 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain SD85_11960 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase SD85_11965 PF00817 impB/mucB/samB family SD85_11965 PF11799 impB/mucB/samB family C-terminal domain SD85_11965 PF11798 IMS family HHH motif SD85_11975 PF02096 60Kd inner membrane protein SD85_11980 PF09844 Uncharacterized conserved protein (COG2071) SD85_11985 PF01546 Peptidase family M20/M25/M40 SD85_11985 PF07687 Peptidase dimerisation domain SD85_11990 PF01039 Carboxyl transferase domain SD85_12005 PF03734 L,D-transpeptidase catalytic domain SD85_12010 PF06081 Aromatic acid exporter family member 1 SD85_12010 PF11728 Putative aromatic acid exporter C-terminal domain SD85_12015 PF00005 ABC transporter SD85_12020 PF00528 Binding-protein-dependent transport system inner membrane component SD85_12025 PF00497 Bacterial extracellular solute-binding proteins, family 3 SD85_12030 PF06491 Disulphide isomerase SD85_12035 PF00781 Diacylglycerol kinase catalytic domain SD85_12040 PF07690 Major Facilitator Superfamily SD85_12045 PF13411 MerR HTH family regulatory protein SD85_12045 PF06445 GyrI-like small molecule binding domain SD85_12050 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) SD85_12050 PF00364 Biotin-requiring enzyme SD85_12050 PF02817 e3 binding domain SD85_12055 PF02780 Transketolase, C-terminal domain SD85_12055 PF02779 Transketolase, pyrimidine binding domain SD85_12060 PF00676 Dehydrogenase E1 component SD85_12065 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain SD85_12065 PF07992 Pyridine nucleotide-disulphide oxidoreductase SD85_12070 PF00871 Acetokinase family SD85_12075 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain SD85_12075 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase SD85_12080 PF01515 Phosphate acetyl/butaryl transferase SD85_12085 PF00158 Sigma-54 interaction domain SD85_12085 PF00989 PAS fold SD85_12085 PF02954 Bacterial regulatory protein, Fis family SD85_12090 PF11118 Protein of unknown function (DUF2627) SD85_12100 PF03972 MmgE/PrpD family SD85_12105 PF00285 Citrate synthase, C-terminal domain SD85_12110 PF00441 Acyl-CoA dehydrogenase, C-terminal domain SD85_12110 PF02770 Acyl-CoA dehydrogenase, middle domain SD85_12110 PF02771 Acyl-CoA dehydrogenase, N-terminal domain SD85_12115 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain SD85_12115 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain SD85_12120 PF00108 Thiolase, N-terminal domain SD85_12120 PF02803 Thiolase, C-terminal domain SD85_12125 PF03009 Glycerophosphoryl diester phosphodiesterase family SD85_12130 PF01520 N-acetylmuramoyl-L-alanine amidase SD85_12145 PF00724 NADH:flavin oxidoreductase / NADH oxidase family SD85_12155 PF08769 Sporulation initiation factor Spo0A C terminal SD85_12155 PF00072 Response regulator receiver domain SD85_12165 PF05580 SpoIVB peptidase S55 SD85_12165 PF17820 PDZ domain SD85_12170 PF13476 AAA domain SD85_12175 PF01316 Arginine repressor, DNA binding domain SD85_12175 PF02863 Arginine repressor, C-terminal domain SD85_12180 PF01728 FtsJ-like methyltransferase SD85_12180 PF01479 S4 domain SD85_12185 PF02779 Transketolase, pyrimidine binding domain SD85_12185 PF02780 Transketolase, C-terminal domain SD85_12185 PF13292 1-deoxy-D-xylulose-5-phosphate synthase SD85_12190 PF00348 Polyprenyl synthetase SD85_12195 PF02609 Exonuclease VII small subunit SD85_12200 PF02601 Exonuclease VII, large subunit SD85_12200 PF13742 OB-fold nucleic acid binding domain SD85_12205 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain SD85_12205 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain SD85_12210 PF01029 NusB family SD85_12215 PF03780 Asp23 family, cell envelope-related function SD85_12220 PF02785 Biotin carboxylase C-terminal domain SD85_12220 PF00289 Biotin carboxylase, N-terminal domain SD85_12220 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain SD85_12225 PF00364 Biotin-requiring enzyme SD85_12230 PF12685 SpoIIIAH-like protein SD85_12240 PF09581 Stage III sporulation protein AF (Spore_III_AF) SD85_12245 PF09546 Stage III sporulation protein AE (spore_III_AE) SD85_12250 PF06686 Stage III sporulation protein AC/AD protein family SD85_12255 PF06686 Stage III sporulation protein AC/AD protein family SD85_12260 PF09548 Stage III sporulation protein AB (spore_III_AB) SD85_12270 PF10942 Protein of unknown function (DUF2619) SD85_12275 PF09285 Elongation factor P, C-terminal SD85_12275 PF08207 Elongation factor P (EF-P) KOW-like domain SD85_12275 PF01132 Elongation factor P (EF-P) OB domain SD85_12280 PF00557 Metallopeptidase family M24 SD85_12280 PF01321 Creatinase/Prolidase N-terminal domain SD85_12285 PF01220 Dehydroquinase class II SD85_12290 PF11085 Conserved membrane protein YqhR SD85_12295 PF07136 Protein of unknown function (DUF1385) SD85_12305 PF01734 Patatin-like phospholipase SD85_12310 PF02742 Iron dependent repressor, metal binding and dimerisation domain SD85_12310 PF01325 Iron dependent repressor, N-terminal DNA binding domain SD85_12315 PF03099 Biotin/lipoate A/B protein ligase family SD85_12320 PF00581 Rhodanese-like domain SD85_12325 PF02347 Glycine cleavage system P-protein SD85_12330 PF02347 Glycine cleavage system P-protein SD85_12335 PF01571 Aminomethyltransferase folate-binding domain SD85_12335 PF08669 Glycine cleavage T-protein C-terminal barrel domain SD85_12340 PF00271 Helicase conserved C-terminal domain SD85_12340 PF00176 SNF2 family N-terminal domain SD85_12345 PF11079 Bacterial protein YqhG of unknown function SD85_12350 PF08671 Anti-repressor SinI SD85_12355 PF01381 Helix-turn-helix SD85_12355 PF08671 Anti-repressor SinI SD85_12360 PF12389 Camelysin metallo-endopeptidase SD85_12375 PF13028 Protein of unknown function (DUF3889) SD85_12380 PF14038 YqzE-like protein SD85_12385 PF14173 ComG operon protein 7 SD85_12390 PF15980 Putative Competence protein ComGF SD85_12400 PF07963 Prokaryotic N-terminal methylation motif SD85_12405 PF07963 Prokaryotic N-terminal methylation motif SD85_12410 PF00482 Type II secretion system (T2SS), protein F SD85_12415 PF00437 Type II/IV secretion system protein SD85_12420 PF00571 CBS domain SD85_12425 PF01544 CorA-like Mg2+ transporter protein SD85_12430 PF03471 Transporter associated domain SD85_12430 PF01595 Cyclin M transmembrane N-terminal domain SD85_12430 PF00571 CBS domain SD85_12435 PF14361 RsbT co-antagonist protein rsbRD N-terminal domain SD85_12435 PF01740 STAS domain SD85_12445 PF03960 ArsC family SD85_12450 PF11117 Protein of unknown function (DUF2626) SD85_12455 PF00753 Metallo-beta-lactamase superfamily SD85_12460 PF10958 Protein of unknown function (DUF2759) SD85_12465 PF01910 Thiamine-binding protein SD85_12475 PF00246 Zinc carboxypeptidase SD85_12480 PF00884 Sulfatase SD85_12485 PF00480 ROK family SD85_12490 PF06014 Bacterial protein of unknown function (DUF910) SD85_12495 PF01694 Rhomboid family SD85_12505 PF01812 5-formyltetrahydrofolate cyclo-ligase family SD85_12510 PF00471 Ribosomal protein L33 SD85_12515 PF13439 Glycosyltransferase Family 4 SD85_12515 PF00534 Glycosyl transferases group 1 SD85_12535 PF00005 ABC transporter SD85_12540 PF00005 ABC transporter SD85_12545 PF00528 Binding-protein-dependent transport system inner membrane component SD85_12550 PF00528 Binding-protein-dependent transport system inner membrane component SD85_12555 PF12849 PBP superfamily domain SD85_12565 PF07690 Major Facilitator Superfamily SD85_12570 PF02777 Iron/manganese superoxide dismutases, C-terminal domain SD85_12570 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain SD85_12575 PF04306 Protein of unknown function (DUF456) SD85_12580 PF06691 Protein of unknown function (DUF1189) SD85_12590 PF04551 GcpE protein SD85_12605 PF01475 Ferric uptake regulator family SD85_12610 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 SD85_12610 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) SD85_12615 PF11116 Protein of unknown function (DUF2624) SD85_12620 PF01261 Xylose isomerase-like TIM barrel SD85_12625 PF00271 Helicase conserved C-terminal domain SD85_12625 PF00270 DEAD/DEAH box helicase SD85_12630 PF14181 YqfQ-like protein SD85_12635 PF02401 LytB protein SD85_12640 PF01784 NIF3 (NGG1p interacting factor 3) SD85_12645 PF04816 tRNA (adenine(22)-N(1))-methyltransferase SD85_12650 PF13442 Cytochrome C oxidase, cbb3-type, subunit III SD85_12655 PF04545 Sigma-70, region 4 SD85_12655 PF03979 Sigma-70 factor, region 1.1 SD85_12655 PF00140 Sigma-70 factor, region 1.2 SD85_12655 PF04542 Sigma-70 region 2 SD85_12655 PF04539 Sigma-70 region 3 SD85_12660 PF10410 DnaB-helicase binding domain of primase SD85_12660 PF08275 DNA primase catalytic core, N-terminal domain SD85_12660 PF01807 CHC2 zinc finger SD85_12665 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 SD85_12670 PF03618 Kinase/pyrophosphorylase SD85_12675 PF08279 HTH domain SD85_12675 PF00571 CBS domain SD85_12680 PF02092 Glycyl-tRNA synthetase beta subunit SD85_12685 PF02091 Glycyl-tRNA synthetase alpha subunit SD85_12690 PF02565 Recombination protein O C terminal SD85_12690 PF11967 Recombination protein O N terminal SD85_12695 PF14006 YqzL-like protein SD85_12700 PF07650 KH domain SD85_12700 PF01926 50S ribosome-binding GTPase SD85_12705 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region SD85_12710 PF01219 Prokaryotic diacylglycerol kinase SD85_12715 PF02130 Uncharacterized protein family UPF0054 SD85_12720 PF01966 HD domain SD85_12720 PF07697 7TM-HD extracellular SD85_12720 PF07698 7TM receptor with intracellular HD hydrolase SD85_12730 PF02562 PhoH-like protein SD85_12735 PF06898 Putative stage IV sporulation protein YqfD SD85_12740 PF07873 YabP family SD85_12750 PF12127 SigmaW regulon antibacterial SD85_12755 PF01957 NfeD-like C-terminal, partner-binding SD85_12755 PF01972 Serine dehydrogenase proteinase SD85_12760 PF09424 Yqey-like protein SD85_12765 PF01165 Ribosomal protein S21 SD85_12770 PF02690 Na+/Pi-cotransporter SD85_12775 PF01938 TRAM domain SD85_12775 PF04055 Radical SAM superfamily SD85_12775 PF00919 Uncharacterized protein family UPF0004 SD85_12780 PF04452 RNA methyltransferase SD85_12790 PF00684 DnaJ central domain SD85_12790 PF00226 DnaJ domain SD85_12790 PF01556 DnaJ C terminal domain SD85_12795 PF00012 Hsp70 protein SD85_12800 PF01025 GrpE SD85_12805 PF01628 HrcA protein C terminal domain SD85_12810 PF06969 HemN C-terminal domain SD85_12810 PF04055 Radical SAM superfamily SD85_12815 PF00679 Elongation factor G C-terminus SD85_12815 PF00009 Elongation factor Tu GTP binding domain SD85_12815 PF06421 GTP-binding protein LepA C-terminus SD85_12815 PF03144 Elongation factor Tu domain 2 SD85_12820 PF12438 Protein of unknown function (DUF3679) SD85_12825 PF07454 Stage II sporulation protein P (SpoIIP) SD85_12830 PF03418 Germination protease SD85_12835 PF01649 Ribosomal protein S20 SD85_12840 PF06144 DNA polymerase III, delta subunit SD85_12845 PF14141 YqzM-like protein SD85_12850 PF13567 Domain of unknown function (DUF4131) SD85_12850 PF00753 Metallo-beta-lactamase superfamily SD85_12850 PF03772 Competence protein SD85_12855 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region SD85_12860 PF10531 SLBB domain SD85_12865 PF03807 NADP oxidoreductase coenzyme F420-dependent SD85_12865 PF14748 Pyrroline-5-carboxylate reductase dimerisation SD85_12870 PF13649 Methyltransferase domain SD85_12880 PF01966 HD domain SD85_12885 PF01467 Cytidylyltransferase-like SD85_12890 PF01985 CRS1 / YhbY (CRM) domain SD85_12895 PF01488 Shikimate / quinate 5-dehydrogenase SD85_12895 PF08501 Shikimate dehydrogenase substrate binding domain SD85_12895 PF18317 Shikimate 5'-dehydrogenase C-terminal domain SD85_12900 PF01926 50S ribosome-binding GTPase SD85_12910 PF08970 Sporulation inhibitor A SD85_12920 PF00657 GDSL-like Lipase/Acylhydrolase SD85_12930 PF01471 Putative peptidoglycan binding domain SD85_12930 PF01510 N-acetylmuramoyl-L-alanine amidase SD85_12935 PF09335 SNARE associated Golgi protein SD85_12940 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase SD85_12940 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain SD85_12950 PF14040 Deoxyribonuclease NucA/NucB SD85_12955 PF04542 Sigma-70 region 2 SD85_12955 PF04545 Sigma-70, region 4 SD85_12960 PF00239 Resolvase, N terminal domain SD85_12960 PF13408 Recombinase zinc beta ribbon domain SD85_12960 PF07508 Recombinase SD85_12965 PF00206 Lyase SD85_12965 PF10415 Fumarase C C-terminus SD85_12970 PF03466 LysR substrate binding domain SD85_12970 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SD85_12990 PF03060 Nitronate monooxygenase SD85_12995 PF01047 MarR family SD85_13005 PF01638 HxlR-like helix-turn-helix SD85_13010 PF00881 Nitroreductase family SD85_13015 PF02311 AraC-like ligand binding domain SD85_13015 PF12833 Helix-turn-helix domain SD85_13025 PF00106 short chain dehydrogenase SD85_13030 PF00583 Acetyltransferase (GNAT) family SD85_13035 PF06445 GyrI-like small molecule binding domain SD85_13035 PF13411 MerR HTH family regulatory protein SD85_13040 PF07690 Major Facilitator Superfamily SD85_13045 PF01066 CDP-alcohol phosphatidyltransferase SD85_13055 PF07729 FCD domain SD85_13055 PF00392 Bacterial regulatory proteins, gntR family SD85_13060 PF00365 Phosphofructokinase SD85_13065 PF07690 Major Facilitator Superfamily SD85_13075 PF02780 Transketolase, C-terminal domain SD85_13075 PF02779 Transketolase, pyrimidine binding domain SD85_13075 PF13292 1-deoxy-D-xylulose-5-phosphate synthase SD85_13080 PF00456 Transketolase, thiamine diphosphate binding domain SD85_13105 PF04237 YjbR SD85_13120 PF09223 ZinT (YodA) periplasmic lipocalin-like zinc-recruitment SD85_13140 PF07875 Coat F domain SD85_13145 PF08240 Alcohol dehydrogenase GroES-like domain SD85_13145 PF00107 Zinc-binding dehydrogenase SD85_13145 PF13823 Alcohol dehydrogenase GroES-associated SD85_13155 PF07875 Coat F domain SD85_13160 PF00381 PTS HPr component phosphorylation site SD85_13165 PF00248 Aldo/keto reductase family SD85_13170 PF06719 AraC-type transcriptional regulator N-terminus SD85_13170 PF12833 Helix-turn-helix domain SD85_13175 PF13411 MerR HTH family regulatory protein SD85_13180 PF13411 MerR HTH family regulatory protein SD85_13185 PF03079 ARD/ARD' family SD85_13190 PF08240 Alcohol dehydrogenase GroES-like domain SD85_13190 PF00107 Zinc-binding dehydrogenase SD85_13195 PF01965 DJ-1/PfpI family SD85_13200 PF00251 Glycosyl hydrolases family 32 N-terminal domain SD85_13200 PF08244 Glycosyl hydrolases family 32 C terminal SD85_13205 PF03613 PTS system mannose/fructose/sorbose family IID component SD85_13210 PF03609 PTS system sorbose-specific iic component SD85_13215 PF03830 PTS system sorbose subfamily IIB component SD85_13220 PF03610 PTS system fructose IIA component SD85_13225 PF03610 PTS system fructose IIA component SD85_13225 PF00874 PRD domain SD85_13225 PF00158 Sigma-54 interaction domain SD85_13240 PF00324 Amino acid permease SD85_13245 PF01810 LysE type translocator SD85_13250 PF01978 Sugar-specific transcriptional regulator TrmB SD85_13250 PF11495 Archaeal transcriptional regulator TrmB SD85_13255 PF04542 Sigma-70 region 2 SD85_13255 PF08281 Sigma-70, region 4 SD85_13260 PF11738 Protein of unknown function (DUF3298) SD85_13260 PF13739 Deacetylase PdaC SD85_13265 PF01757 Acyltransferase family SD85_13270 PF14145 YrhK-like protein SD85_13275 PF00667 FAD binding domain SD85_13275 PF00258 Flavodoxin SD85_13275 PF00175 Oxidoreductase NAD-binding domain SD85_13275 PF00067 Cytochrome P450 SD85_13280 PF00440 Bacterial regulatory proteins, tetR family SD85_13280 PF16295 Tetracyclin repressor-like, C-terminal domain SD85_13285 PF08241 Methyltransferase domain SD85_13300 PF09501 Probable sporulation protein (Bac_small_yrzI) SD85_13305 PF01226 Formate/nitrite transporter SD85_13310 PF10057 Uncharacterized conserved protein (DUF2294) SD85_13315 PF00037 4Fe-4S binding domain SD85_13315 PF04879 Molybdopterin oxidoreductase Fe4S4 domain SD85_13315 PF01568 Molydopterin dinucleotide binding domain SD85_13315 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region SD85_13315 PF00384 Molybdopterin oxidoreductase SD85_13320 PF07849 Protein of unknown function (DUF1641) SD85_13325 PF14143 YrhC-like protein SD85_13330 PF01053 Cys/Met metabolism PLP-dependent enzyme SD85_13335 PF00291 Pyridoxal-phosphate dependent enzyme SD85_13340 PF01048 Phosphorylase superfamily SD85_13345 PF13649 Methyltransferase domain SD85_13350 PF10750 Protein of unknown function (DUF2536) SD85_13355 PF07423 Domain of unknown function (DUF1510) SD85_13360 PF03717 Penicillin-binding Protein dimerisation domain SD85_13360 PF00905 Penicillin binding protein transpeptidase domain SD85_13365 PF03449 Transcription elongation factor, N-terminal SD85_13365 PF01272 Transcription elongation factor, GreA/GreB, C-term SD85_13370 PF00485 Phosphoribulokinase / Uridine kinase family SD85_13390 PF02618 YceG-like family SD85_13395 PF06949 Protein of unknown function (DUF1292) SD85_13400 PF03652 Holliday junction resolvase SD85_13405 PF06135 IreB regulatory phosphoprotein SD85_13410 PF01411 tRNA synthetases class II (A) SD85_13410 PF02272 DHHA1 domain SD85_13410 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain SD85_13415 PF01594 AI-2E family transporter SD85_13420 PF13056 Protein of unknown function (DUF3918) SD85_13430 PF05239 PRC-barrel domain SD85_13435 PF13538 UvrD-like helicase C-terminal domain SD85_13435 PF14490 Helix-hairpin-helix containing domain SD85_13435 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain SD85_13440 PF07719 Tetratricopeptide repeat SD85_13440 PF13181 Tetratricopeptide repeat SD85_13450 PF00266 Aminotransferase class-V SD85_13455 PF02082 Transcriptional regulator SD85_13460 PF16193 AAA C-terminal domain SD85_13460 PF12002 MgsA AAA+ ATPase C terminal SD85_13460 PF05496 Holliday junction DNA helicase RuvB P-loop domain SD85_13475 PF00899 ThiF family SD85_13485 PF01336 OB-fold nucleic acid binding domain SD85_13485 PF00152 tRNA synthetases class II (D, K and N) SD85_13485 PF02938 GAD domain SD85_13490 PF03129 Anticodon binding domain SD85_13490 PF13393 Histidyl-tRNA synthetase SD85_13500 PF17449 Uncharacterized YrzK-like SD85_13505 PF08239 Bacterial SH3 domain SD85_13505 PF01520 N-acetylmuramoyl-L-alanine amidase SD85_13510 PF02580 D-Tyr-tRNA(Tyr) deacylase SD85_13515 PF04607 Region found in RelA / SpoT proteins SD85_13515 PF13291 ACT domain SD85_13515 PF02824 TGS domain SD85_13520 PF00156 Phosphoribosyl transferase domain SD85_13525 PF02272 DHHA1 domain SD85_13525 PF01368 DHH family SD85_13525 PF17768 RecJ OB domain SD85_13525 PF10141 Single-strand DNA-specific exonuclease, C terminal domain SD85_13530 PF06305 Lipopolysaccharide assembly protein A domain SD85_13535 PF02080 TrkA-C domain SD85_13540 PF02355 Protein export membrane protein SD85_13540 PF07549 SecD/SecF GG Motif SD85_13545 PF13797 Post-transcriptional regulator SD85_13550 PF01943 Polysaccharide biosynthesis protein SD85_13550 PF14667 Polysaccharide biosynthesis C-terminal domain SD85_13555 PF04239 Protein of unknown function (DUF421) SD85_13560 PF12670 Protein of unknown function (DUF3792) SD85_13565 PF02699 Preprotein translocase subunit SD85_13570 PF01702 Queuine tRNA-ribosyltransferase SD85_13575 PF02547 Queuosine biosynthesis protein SD85_13580 PF11146 Protein of unknown function (DUF2905) SD85_13585 PF05496 Holliday junction DNA helicase RuvB P-loop domain SD85_13585 PF05491 RuvB C-terminal winged helix domain SD85_13585 PF17864 RuvB AAA lid domain SD85_13590 PF07499 RuvA, C-terminal domain SD85_13590 PF01330 RuvA N terminal domain SD85_13595 PF08955 BofC C-terminal domain SD85_13595 PF08977 Bypass of Forespore C, N terminal SD85_13600 PF07690 Major Facilitator Superfamily SD85_13605 PF02894 Oxidoreductase family, C-terminal alpha/beta domain SD85_13605 PF01408 Oxidoreductase family, NAD-binding Rossmann fold SD85_13620 PF01235 Sodium:alanine symporter family SD85_13625 PF01709 Transcriptional regulator SD85_13630 PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) SD85_13635 PF01476 LysM domain SD85_13640 PF02445 Quinolinate synthetase A protein SD85_13645 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain SD85_13645 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain SD85_13650 PF02910 Fumarate reductase flavoprotein C-term SD85_13650 PF00890 FAD binding domain SD85_13655 PF00266 Aminotransferase class-V SD85_13660 PF02829 3H domain SD85_13660 PF08279 HTH domain SD85_13665 PF01842 ACT domain SD85_13665 PF00800 Prephenate dehydratase SD85_13670 PF01842 ACT domain SD85_13675 PF09269 Domain of unknown function (DUF1967) SD85_13675 PF01926 50S ribosome-binding GTPase SD85_13675 PF01018 GTP1/OBG SD85_13680 PF14682 Sporulation initiation phospho-transferase B, C-terminal SD85_13680 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain SD85_13690 PF01016 Ribosomal L27 protein SD85_13695 PF04327 Cysteine protease Prp SD85_13700 PF00829 Ribosomal prokaryotic L21 protein SD85_13705 PF02163 Peptidase family M50 SD85_13710 PF01551 Peptidase family M23 SD85_13715 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain SD85_13720 PF03775 Septum formation inhibitor MinC, C-terminal domain SD85_13725 PF04093 rod shape-determining protein MreD SD85_13730 PF04085 rod shape-determining protein MreC SD85_13740 PF00633 Helix-hairpin-helix motif SD85_13740 PF04002 RadC-like JAB domain SD85_13745 PF02545 Maf-like protein SD85_13750 PF05036 Sporulation related domain SD85_13755 PF01478 Type IV leader peptidase family SD85_13755 PF06750 Bacterial Peptidase A24 N-terminal domain SD85_13760 PF02875 Mur ligase family, glutamate ligase domain SD85_13760 PF08245 Mur ligase middle domain SD85_13765 PF10458 Valyl tRNA synthetase tRNA binding arm SD85_13765 PF08264 Anticodon-binding domain of tRNA SD85_13765 PF00133 tRNA synthetases class I (I, L, M and V) SD85_13780 PF01476 LysM domain SD85_13785 PF00202 Aminotransferase class-III SD85_13790 PF00490 Delta-aminolevulinic acid dehydratase SD85_13795 PF02602 Uroporphyrinogen-III synthase HemD SD85_13800 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain SD85_13800 PF03900 Porphobilinogen deaminase, C-terminal domain SD85_13805 PF01578 Cytochrome C assembly protein SD85_13810 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain SD85_13810 PF01488 Shikimate / quinate 5-dehydrogenase SD85_13810 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain SD85_13820 PF01926 50S ribosome-binding GTPase SD85_13825 PF02190 ATP-dependent protease La (LON) substrate-binding domain SD85_13825 PF00004 ATPase family associated with various cellular activities (AAA) SD85_13825 PF05362 Lon protease (S16) C-terminal proteolytic domain SD85_13830 PF05362 Lon protease (S16) C-terminal proteolytic domain SD85_13830 PF00004 ATPase family associated with various cellular activities (AAA) SD85_13835 PF07724 AAA domain (Cdc48 subfamily) SD85_13835 PF10431 C-terminal, D2-small domain, of ClpB protein SD85_13835 PF06689 ClpX C4-type zinc finger SD85_13840 PF05698 Bacterial trigger factor protein (TF) C-terminus SD85_13840 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase SD85_13840 PF05697 Bacterial trigger factor protein (TF) SD85_13850 PF00694 Aconitase C-terminal domain SD85_13855 PF00330 Aconitase family (aconitate hydratase) SD85_13860 PF00180 Isocitrate/isopropylmalate dehydrogenase SD85_13865 PF08502 LeuA allosteric (dimerisation) domain SD85_13865 PF00682 HMGL-like SD85_13870 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain SD85_13870 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain SD85_13875 PF10369 Small subunit of acetolactate synthase SD85_13875 PF01842 ACT domain SD85_13880 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain SD85_13880 PF00205 Thiamine pyrophosphate enzyme, central domain SD85_13880 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain SD85_13890 PF00583 Acetyltransferase (GNAT) family SD85_13900 PF09557 Domain of unknown function (DUF2382) SD85_13900 PF11181 Heat induced stress protein YflT SD85_13910 PF12850 Calcineurin-like phosphoesterase superfamily domain SD85_13915 PF01725 Ham1 family SD85_13920 PF03725 3' exoribonuclease family, domain 2 SD85_13920 PF01138 3' exoribonuclease family, domain 1 SD85_13925 PF10646 Sporulation and spore germination SD85_13930 PF01177 Asp/Glu/Hydantoin racemase SD85_13935 PF01047 MarR family SD85_13940 PF00196 Bacterial regulatory proteins, luxR family SD85_13945 PF03061 Thioesterase superfamily SD85_13950 PF13183 4Fe-4S dicluster domain SD85_13950 PF13085 2Fe-2S iron-sulfur cluster binding domain SD85_13955 PF00890 FAD binding domain SD85_13955 PF02910 Fumarate reductase flavoprotein C-term SD85_13960 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit SD85_13970 PF10702 Protein of unknown function (DUF2507) SD85_13975 PF01842 ACT domain SD85_13975 PF13840 ACT domain SD85_13975 PF00696 Amino acid kinase family SD85_13980 PF01541 GIY-YIG catalytic domain SD85_13980 PF08459 UvrC Helix-hairpin-helix N-terminal SD85_13980 PF02151 UvrB/uvrC motif SD85_13985 PF00085 Thioredoxin SD85_13990 PF06964 Alpha-L-arabinofuranosidase C-terminal domain SD85_13995 PF01012 Electron transfer flavoprotein domain SD85_13995 PF00766 Electron transfer flavoprotein FAD-binding domain SD85_14000 PF01012 Electron transfer flavoprotein domain SD85_14005 PF00378 Enoyl-CoA hydratase/isomerase SD85_14010 PF00440 Bacterial regulatory proteins, tetR family SD85_14010 PF08359 YsiA-like protein, C-terminal region SD85_14015 PF00501 AMP-binding enzyme SD85_14015 PF13193 AMP-binding enzyme C-terminal domain SD85_14020 PF03994 Domain of Unknown Function (DUF350) SD85_14025 PF01713 Smr domain SD85_14025 PF00488 MutS domain V SD85_14030 PF02811 PHP domain SD85_14030 PF14716 Helix-hairpin-helix domain SD85_14030 PF14791 DNA polymerase beta thumb SD85_14035 PF02674 Colicin V production protein SD85_14040 PF05164 Cell division protein ZapA SD85_14045 PF01351 Ribonuclease HII SD85_14045 PF11858 Domain of unknown function (DUF3378) SD85_14050 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain SD85_14050 PF03483 B3/4 domain SD85_14050 PF03484 tRNA synthetase B5 domain SD85_14050 PF01588 Putative tRNA binding domain SD85_14050 PF03147 Ferredoxin-fold anticodon binding domain SD85_14055 PF01409 tRNA synthetases class II core domain (F) SD85_14055 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain SD85_14060 PF00588 SpoU rRNA Methylase family SD85_14060 PF08032 RNA 2'-O ribose methyltransferase substrate binding SD85_14065 PF14098 Small, acid-soluble spore protein I SD85_14070 PF03009 Glycerophosphoryl diester phosphodiesterase family SD85_14075 PF01565 FAD binding domain SD85_14075 PF02913 FAD linked oxidases, C-terminal domain SD85_14080 PF13183 4Fe-4S dicluster domain SD85_14080 PF02754 Cysteine-rich domain SD85_14085 PF12681 Glyoxalase-like domain SD85_14090 PF13722 5TM C-terminal transporter carbon starvation CstA SD85_14090 PF02554 Carbon starvation protein CstA SD85_14105 PF03551 Transcriptional regulator PadR-like family SD85_14110 PF06964 Alpha-L-arabinofuranosidase C-terminal domain SD85_14115 PF00528 Binding-protein-dependent transport system inner membrane component SD85_14120 PF00528 Binding-protein-dependent transport system inner membrane component SD85_14125 PF01547 Bacterial extracellular solute-binding protein SD85_14130 PF13685 Iron-containing alcohol dehydrogenase SD85_14135 PF13344 Haloacid dehalogenase-like hydrolase SD85_14140 PF00596 Class II Aldolase and Adducin N-terminal domain SD85_14145 PF00370 FGGY family of carbohydrate kinases, N-terminal domain SD85_14145 PF02782 FGGY family of carbohydrate kinases, C-terminal domain SD85_14150 PF11762 L-arabinose isomerase C-terminal domain SD85_14150 PF02610 L-arabinose isomerase SD85_14155 PF04616 Glycosyl hydrolases family 43 SD85_14160 PF05343 M42 glutamyl aminopeptidase SD85_14170 PF06961 Protein of unknown function (DUF1294) SD85_14175 PF00453 Ribosomal protein L20 SD85_14180 PF01632 Ribosomal protein L35 SD85_14185 PF00707 Translation initiation factor IF-3, C-terminal domain SD85_14185 PF05198 Translation initiation factor IF-3, N-terminal domain SD85_14200 PF04172 LrgB-like family SD85_14205 PF03788 LrgA family SD85_14210 PF00072 Response regulator receiver domain SD85_14210 PF04397 LytTr DNA-binding domain SD85_14215 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SD85_14215 PF06580 Histidine kinase SD85_14215 PF07694 5TMR of 5TMR-LYT SD85_14225 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain SD85_14225 PF02824 TGS domain SD85_14225 PF03129 Anticodon binding domain SD85_14225 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) SD85_14230 PF08812 YtxC-like family SD85_14235 PF09335 SNARE associated Golgi protein SD85_14240 PF01695 IstB-like ATP binding protein SD85_14240 PF07319 Primosomal protein DnaI N-terminus SD85_14245 PF07261 Replication initiation and membrane attachment SD85_14250 PF03477 ATP cone domain SD85_14255 PF02675 S-adenosylmethionine decarboxylase SD85_14260 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain SD85_14260 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain SD85_14265 PF01638 HxlR-like helix-turn-helix SD85_14270 PF07690 Major Facilitator Superfamily SD85_14275 PF00248 Aldo/keto reductase family SD85_14280 PF01121 Dephospho-CoA kinase SD85_14295 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain SD85_14295 PF06827 Zinc finger found in FPG and IleRS SD85_14295 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain SD85_14300 PF00476 DNA polymerase family A SD85_14300 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain SD85_14300 PF01367 5'-3' exonuclease, C-terminal SAM fold SD85_14305 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SD85_14305 PF00512 His Kinase A (phospho-acceptor) domain SD85_14305 PF00989 PAS fold SD85_14305 PF16736 Single Cache-like SD85_14310 PF00486 Transcriptional regulatory protein, C terminal SD85_14310 PF00072 Response regulator receiver domain SD85_14315 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain SD85_14315 PF00056 lactate/malate dehydrogenase, NAD binding domain SD85_14320 PF00180 Isocitrate/isopropylmalate dehydrogenase SD85_14325 PF00285 Citrate synthase, C-terminal domain SD85_14330 PF04284 Protein of unknown function (DUF441) SD85_14335 PF01594 AI-2E family transporter SD85_14340 PF04186 FxsA cytoplasmic membrane protein SD85_14345 PF00391 PEP-utilising enzyme, mobile domain SD85_14345 PF00224 Pyruvate kinase, barrel domain SD85_14345 PF02887 Pyruvate kinase, alpha/beta domain SD85_14350 PF00365 Phosphofructokinase SD85_14355 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit SD85_14360 PF01039 Carboxyl transferase domain SD85_14360 PF17848 Acetyl-coA carboxylase zinc finger domain SD85_14365 PF00390 Malic enzyme, N-terminal domain SD85_14365 PF03949 Malic enzyme, NAD binding domain SD85_14370 PF01336 OB-fold nucleic acid binding domain SD85_14370 PF07733 Bacterial DNA polymerase III alpha NTPase domain SD85_14370 PF14579 Helix-hairpin-helix motif SD85_14370 PF02811 PHP domain SD85_14370 PF17657 Bacterial DNA polymerase III alpha subunit finger domain SD85_14375 PF14034 Sporulation protein YtrH SD85_14390 PF02272 DHHA1 domain SD85_14390 PF01368 DHH family SD85_14395 PF14007 YtpI-like protein SD85_14400 PF03061 Thioesterase superfamily SD85_14400 PF00571 CBS domain SD85_14400 PF00392 Bacterial regulatory proteins, gntR family SD85_14400 PF07085 DRTGG domain SD85_14420 PF14698 Argininosuccinate lyase C-terminal SD85_14420 PF00206 Lyase SD85_14425 PF00764 Arginosuccinate synthase SD85_14430 PF00994 Probable molybdopterin binding domain SD85_14435 PF00871 Acetokinase family SD85_14440 PF02384 N-6 DNA Methylase SD85_14445 PF08534 Redoxin SD85_14450 PF09579 Sporulation protein YtfJ (Spore_YtfJ) SD85_14455 PF11167 Protein of unknown function (DUF2953) SD85_14460 PF06271 RDD family SD85_14465 PF01343 Peptidase family S49 SD85_14470 PF01513 ATP-NAD kinase SD85_14475 PF07969 Amidohydrolase family SD85_14480 PF13193 AMP-binding enzyme C-terminal domain SD85_14480 PF00501 AMP-binding enzyme SD85_14485 PF00269 Small, acid-soluble spore proteins, alpha/beta type SD85_14490 PF02926 THUMP domain SD85_14490 PF02568 Thiamine biosynthesis protein (ThiI) SD85_14495 PF00266 Aminotransferase class-V SD85_14500 PF05525 Branched-chain amino acid transport protein SD85_14505 PF06160 Septation ring formation regulator, EzrA SD85_14510 PF02811 PHP domain SD85_14515 PF00440 Bacterial regulatory proteins, tetR family SD85_14520 PF13185 GAF domain SD85_14525 PF00990 Diguanylate cyclase, GGDEF domain SD85_14530 PF01479 S4 domain SD85_14530 PF00163 Ribosomal protein S4/S9 N-terminal domain SD85_14540 PF00579 tRNA synthetases class I (W and Y) SD85_14540 PF01479 S4 domain SD85_14545 PF13193 AMP-binding enzyme C-terminal domain SD85_14545 PF00501 AMP-binding enzyme SD85_14550 PF00583 Acetyltransferase (GNAT) family SD85_14555 PF00571 CBS domain SD85_14560 PF00850 Histone deacetylase domain SD85_14565 PF13677 Membrane MotB of proton-channel complex MotA/MotB SD85_14565 PF00691 OmpA family SD85_14570 PF01618 MotA/TolQ/ExbB proton channel family SD85_14575 PF00356 Bacterial regulatory proteins, lacI family SD85_14580 PF00793 DAHP synthetase I family SD85_14580 PF01817 Chorismate mutase type II SD85_14585 PF11009 Protein of unknown function (DUF2847) SD85_14590 PF12732 YtxH-like protein SD85_14595 PF06103 Bacterial protein of unknown function (DUF948) SD85_14600 PF01225 Mur ligase family, catalytic domain SD85_14600 PF02875 Mur ligase family, glutamate ligase domain SD85_14600 PF08245 Mur ligase middle domain SD85_14605 PF01580 FtsK/SpoIIIE family SD85_14605 PF09397 Ftsk gamma domain SD85_14605 PF17854 FtsK alpha domain SD85_14610 PF14794 Domain of unknown function (DUF4479) SD85_14610 PF01588 Putative tRNA binding domain SD85_14615 PF07285 Protein of unknown function (DUF1444) SD85_14620 PF00085 Thioredoxin SD85_14625 PF11071 Nucleoside 2-deoxyribosyltransferase YtoQ SD85_14630 PF05343 M42 glutamyl aminopeptidase SD85_14635 PF03413 Peptidase propeptide and YPEB domain SD85_14640 PF03949 Malic enzyme, NAD binding domain SD85_14640 PF00390 Malic enzyme, N-terminal domain SD85_14645 PF00753 Metallo-beta-lactamase superfamily SD85_14650 PF02390 Putative methyltransferase SD85_14655 PF14165 YtzH-like protein SD85_14660 PF01636 Phosphotransferase enzyme family SD85_14665 PF00128 Alpha amylase, catalytic domain SD85_14665 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) SD85_14665 PF17999 Pullulanase N1-terminal domain SD85_14670 PF00781 Diacylglycerol kinase catalytic domain SD85_14685 PF00291 Pyridoxal-phosphate dependent enzyme SD85_14690 PF01546 Peptidase family M20/M25/M40 SD85_14695 PF00860 Permease family SD85_14700 PF05975 Bacterial ABC transporter protein EcsB SD85_14705 PF00005 ABC transporter SD85_14710 PF08220 DeoR-like helix-turn-helix domain SD85_14715 PF01479 S4 domain SD85_14715 PF00849 RNA pseudouridylate synthase SD85_14720 PF01943 Polysaccharide biosynthesis protein SD85_14720 PF14667 Polysaccharide biosynthesis C-terminal domain SD85_14730 PF02028 BCCT, betaine/carnitine/choline family transporter SD85_14735 PF10957 Sporulation protein Cse60 SD85_14740 PF04854 Protein of unknown function, DUF624 SD85_14745 PF02894 Oxidoreductase family, C-terminal alpha/beta domain SD85_14745 PF01408 Oxidoreductase family, NAD-binding Rossmann fold SD85_14755 PF07470 Glycosyl Hydrolase Family 88 SD85_14760 PF00528 Binding-protein-dependent transport system inner membrane component SD85_14765 PF12833 Helix-turn-helix domain SD85_14765 PF17853 GGDEF-like domain SD85_14770 PF13416 Bacterial extracellular solute-binding protein SD85_14775 PF00528 Binding-protein-dependent transport system inner membrane component SD85_14780 PF01370 NAD dependent epimerase/dehydratase family SD85_14785 PF00067 Cytochrome P450 SD85_14790 PF04055 Radical SAM superfamily SD85_14790 PF06968 Biotin and Thiamin Synthesis associated domain SD85_14800 PF00155 Aminotransferase class I and II SD85_14805 PF00202 Aminotransferase class-III SD85_14810 PF03744 6-carboxyhexanoate--CoA ligase SD85_14820 PF01738 Dienelactone hydrolase family SD85_14845 PF02056 Family 4 glycosyl hydrolase SD85_14845 PF11975 Family 4 glycosyl hydrolase C-terminal domain SD85_14850 PF00581 Rhodanese-like domain SD85_14855 PF00133 tRNA synthetases class I (I, L, M and V) SD85_14855 PF08264 Anticodon-binding domain of tRNA SD85_14855 PF09334 tRNA synthetases class I (M) SD85_14855 PF13603 Leucyl-tRNA synthetase, Domain 2 SD85_14860 PF14074 Protein of unknown function (DUF4257) SD85_14865 PF01740 STAS domain SD85_14865 PF13426 PAS domain SD85_14870 PF07690 Major Facilitator Superfamily SD85_14875 PF04791 LMBR1-like membrane protein SD85_14880 PF02687 FtsX-like permease family SD85_14885 PF00005 ABC transporter SD85_14890 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SD85_14895 PF00486 Transcriptional regulatory protein, C terminal SD85_14895 PF00072 Response regulator receiver domain SD85_14900 PF12704 MacB-like periplasmic core domain SD85_14900 PF02687 FtsX-like permease family SD85_14905 PF00005 ABC transporter SD85_14920 PF00005 ABC transporter SD85_14925 PF00392 Bacterial regulatory proteins, gntR family SD85_14935 PF10732 Protein of unknown function (DUF2524) SD85_14940 PF16199 Radical_SAM C-terminal domain SD85_14940 PF04055 Radical SAM superfamily SD85_14945 PF06962 Putative rRNA methylase SD85_14950 PF10776 Protein of unknown function (DUF2600) SD85_14955 PF12146 Serine aminopeptidase, S33 SD85_14960 PF00132 Bacterial transferase hexapeptide (six repeats) SD85_14965 PF00324 Amino acid permease SD85_14970 PF00733 Asparagine synthase SD85_14970 PF13537 Glutamine amidotransferase domain SD85_14975 PF02773 S-adenosylmethionine synthetase, C-terminal domain SD85_14975 PF02772 S-adenosylmethionine synthetase, central domain SD85_14975 PF00438 S-adenosylmethionine synthetase, N-terminal domain SD85_14980 PF01293 Phosphoenolpyruvate carboxykinase SD85_14985 PF10763 Protein of unknown function (DUF2584) SD85_14990 PF00326 Prolyl oligopeptidase family SD85_15000 PF00005 ABC transporter SD85_15005 PF00528 Binding-protein-dependent transport system inner membrane component SD85_15010 PF13276 HTH-like domain SD85_15010 PF00665 Integrase core domain SD85_15010 PF13333 Integrase core domain SD85_15020 PF00293 NUDIX domain SD85_15025 PF05105 Bacteriophage holin family SD85_15030 PF00210 Ferritin-like domain SD85_15040 PF13115 YtkA-like SD85_15045 PF02664 S-Ribosylhomocysteinase (LuxS) SD85_15050 PF01809 Putative membrane protein insertion efficiency factor SD85_15055 PF00484 Carbonic anhydrase SD85_15060 PF01197 Ribosomal protein L31 SD85_15065 PF01654 Cytochrome bd terminal oxidase subunit I SD85_15070 PF02322 Cytochrome bd terminal oxidase subunit II SD85_15075 PF07561 Domain of Unknown Function (DUF1540) SD85_15080 PF00950 ABC 3 transport family SD85_15085 PF00950 ABC 3 transport family SD85_15090 PF00005 ABC transporter SD85_15095 PF01297 Zinc-uptake complex component A periplasmic SD85_15100 PF13378 Enolase C-terminal domain-like SD85_15100 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain SD85_15105 PF00501 AMP-binding enzyme SD85_15105 PF13193 AMP-binding enzyme C-terminal domain SD85_15110 PF00378 Enoyl-CoA hydratase/isomerase SD85_15115 PF00561 alpha/beta hydrolase fold SD85_15120 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain SD85_15120 PF16582 Middle domain of thiamine pyrophosphate SD85_15120 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain SD85_15125 PF00425 chorismate binding enzyme SD85_15130 PF01258 Prokaryotic dksA/traR C4-type zinc finger SD85_15135 PF00483 Nucleotidyl transferase SD85_15140 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain SD85_15140 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain SD85_15140 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain SD85_15145 PF01370 NAD dependent epimerase/dehydratase family SD85_15150 PF13439 Glycosyltransferase Family 4 SD85_15150 PF00534 Glycosyl transferases group 1 SD85_15165 PF00534 Glycosyl transferases group 1 SD85_15165 PF13439 Glycosyltransferase Family 4 SD85_15170 PF01636 Phosphotransferase enzyme family SD85_15175 PF03073 TspO/MBR family SD85_15180 PF00343 Carbohydrate phosphorylase SD85_15185 PF08323 Starch synthase catalytic domain SD85_15185 PF00534 Glycosyl transferases group 1 SD85_15190 PF00483 Nucleotidyl transferase SD85_15195 PF00483 Nucleotidyl transferase SD85_15200 PF02806 Alpha amylase, C-terminal all-beta domain SD85_15200 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) SD85_15200 PF00128 Alpha amylase, catalytic domain SD85_15330 PF09515 Thiamine transporter protein (Thia_YuaJ) SD85_15335 PF00583 Acetyltransferase (GNAT) family SD85_15340 PF15975 Flotillin SD85_15340 PF01145 SPFH domain / Band 7 family SD85_15350 PF12867 DinB superfamily SD85_15360 PF00465 Iron-containing alcohol dehydrogenase SD85_15375 PF17735 Biofilm surface layer A SD85_15380 PF02080 TrkA-C domain SD85_15380 PF02254 TrkA-N domain SD85_15385 PF02386 Cation transport protein SD85_15390 PF05360 yiaA/B two helix domain SD85_15395 PF13457 GW (Gly-Tryp) dipeptide domain SD85_15395 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase SD85_15400 PF07690 Major Facilitator Superfamily SD85_15405 PF05995 Cysteine dioxygenase type I SD85_15415 PF02673 Bacitracin resistance protein BacA SD85_15420 PF01594 AI-2E family transporter SD85_15425 PF02894 Oxidoreductase family, C-terminal alpha/beta domain SD85_15425 PF01408 Oxidoreductase family, NAD-binding Rossmann fold SD85_15430 PF06134 L-rhamnose isomerase (RhaA) SD85_15435 PF05336 L-rhamnose mutarotase SD85_15440 PF00370 FGGY family of carbohydrate kinases, N-terminal domain SD85_15440 PF02782 FGGY family of carbohydrate kinases, C-terminal domain SD85_15445 PF08220 DeoR-like helix-turn-helix domain SD85_15445 PF00455 DeoR C terminal sensor domain SD85_15450 PF00596 Class II Aldolase and Adducin N-terminal domain SD85_15455 PF02743 Cache domain SD85_15455 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain SD85_15455 PF00672 HAMP domain SD85_15460 PF02743 Cache domain SD85_15460 PF00672 HAMP domain SD85_15460 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain SD85_15465 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain SD85_15465 PF00672 HAMP domain SD85_15465 PF02743 Cache domain SD85_15470 PF02743 Cache domain SD85_15470 PF00672 HAMP domain SD85_15470 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain SD85_15485 PF03060 Nitronate monooxygenase SD85_15490 PF01894 Uncharacterised protein family UPF0047 SD85_15495 PF16657 Maltogenic Amylase, C-terminal domain SD85_15495 PF00128 Alpha amylase, catalytic domain SD85_15505 PF00665 Integrase core domain SD85_15505 PF13333 Integrase core domain SD85_15505 PF13276 HTH-like domain SD85_15510 PF03471 Transporter associated domain SD85_15510 PF00571 CBS domain SD85_15510 PF01595 Cyclin M transmembrane N-terminal domain SD85_15515 PF04298 Putative neutral zinc metallopeptidase SD85_15525 PF11458 Membrane-integrating protein Mistic SD85_15530 PF02254 TrkA-N domain SD85_15530 PF07885 Ion channel SD85_15535 PF08868 YugN-like family SD85_15545 PF00342 Phosphoglucose isomerase SD85_15550 PF00465 Iron-containing alcohol dehydrogenase SD85_15555 PF00465 Iron-containing alcohol dehydrogenase SD85_15560 PF04070 Domain of unknown function (DUF378) SD85_15565 PF00575 S1 RNA binding domain SD85_15570 PF00155 Aminotransferase class I and II SD85_15575 PF01037 Lrp/AsnC ligand binding domain SD85_15580 PF08386 TAP-like protein SD85_15580 PF00561 alpha/beta hydrolase fold SD85_15585 PF08958 Domain of unknown function (DUF1871) SD85_15590 PF00155 Aminotransferase class I and II SD85_15595 PF00512 His Kinase A (phospho-acceptor) domain SD85_15595 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SD85_15600 PF08810 Kinase associated protein B SD85_15605 PF00929 Exonuclease SD85_15615 PF07690 Major Facilitator Superfamily SD85_15620 PF00905 Penicillin binding protein transpeptidase domain SD85_15620 PF00912 Transglycosylase SD85_15625 PF04134 Protein of unknown function, DUF393 SD85_15630 PF17328 Family of unknown function (DUF5366) SD85_15635 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain SD85_15635 PF00989 PAS fold SD85_15635 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SD85_15635 PF17203 Single cache domain 3 SD85_15640 PF00072 Response regulator receiver domain SD85_15645 PF03390 2-hydroxycarboxylate transporter family SD85_15655 PF00361 Proton-conducting membrane transporter SD85_15655 PF13244 Domain of unknown function (DUF4040) SD85_15655 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus SD85_15660 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter SD85_15665 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L SD85_15670 PF00361 Proton-conducting membrane transporter SD85_15675 PF01899 Na+/H+ ion antiporter subunit SD85_15680 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) SD85_15685 PF03334 Na+/H+ antiporter subunit SD85_15690 PF03061 Thioesterase superfamily SD85_15695 PF00072 Response regulator receiver domain SD85_15695 PF00196 Bacterial regulatory proteins, luxR family SD85_15700 PF07730 Histidine kinase SD85_15700 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SD85_15710 PF00348 Polyprenyl synthetase SD85_15715 PF08181 DegQ (SacQ) family SD85_15725 PF08668 HDOD domain SD85_15725 PF00563 EAL domain SD85_15730 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family SD85_15730 PF17956 Nicotinate phosphoribosyltransferase C-terminal domain SD85_15730 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain SD85_15735 PF00857 Isochorismatase family SD85_15740 PF07997 Protein of unknown function (DUF1694) SD85_15745 PF14166 YueH-like protein SD85_15750 PF10676 Spore germination protein gerPA/gerPF SD85_15755 PF01594 AI-2E family transporter SD85_15760 PF10049 Protein of unknown function (DUF2283) SD85_15765 PF10842 Protein of unknown function (DUF2642) SD85_15770 PF01966 HD domain SD85_15775 PF00106 short chain dehydrogenase SD85_15780 PF17355 Family of unknown function (DUF5383) SD85_15790 PF12538 DNA transporter SD85_15790 PF01580 FtsK/SpoIIIE family SD85_15795 PF10140 WXG100 protein secretion system (Wss), protein YukC SD85_15800 PF08817 WXG100 protein secretion system (Wss), protein YukD SD85_15805 PF06013 Proteins of 100 residues with WXG SD85_15810 PF13556 PucR C-terminal helix-turn-helix domain SD85_15810 PF17853 GGDEF-like domain SD85_15810 PF06018 CodY GAF-like domain SD85_15815 PF05222 Alanine dehydrogenase/PNT, N-terminal domain SD85_15815 PF01262 Alanine dehydrogenase/PNT, C-terminal domain SD85_15820 PF10042 Uncharacterized conserved protein (DUF2278) SD85_15825 PF03621 MbtH-like protein SD85_15830 PF00550 Phosphopantetheine attachment site SD85_15830 PF00501 AMP-binding enzyme SD85_15830 PF13193 AMP-binding enzyme C-terminal domain SD85_15830 PF00975 Thioesterase domain SD85_15830 PF00668 Condensation domain SD85_15835 PF00550 Phosphopantetheine attachment site SD85_15835 PF00857 Isochorismatase family SD85_15840 PF00501 AMP-binding enzyme SD85_15840 PF13193 AMP-binding enzyme C-terminal domain SD85_15845 PF00425 chorismate binding enzyme SD85_15850 PF00106 short chain dehydrogenase SD85_15855 PF00756 Putative esterase SD85_15860 PF00174 Oxidoreductase molybdopterin binding domain SD85_15865 PF02632 BioY family SD85_15870 PF13726 Na+-H+ antiporter family SD85_15870 PF03553 Na+/H+ antiporter family SD85_15875 PF00883 Cytosol aminopeptidase family, catalytic domain SD85_15875 PF02789 Cytosol aminopeptidase family, N-terminal domain SD85_15880 PF02681 Divergent PAP2 family SD85_15885 PF06725 3D domain SD85_15890 PF14068 Putative membrane protein SD85_15895 PF17302 Family of unknown function (DUF5351) SD85_15900 PF07992 Pyridine nucleotide-disulphide oxidoreductase SD85_15905 PF07992 Pyridine nucleotide-disulphide oxidoreductase SD85_15915 PF00478 IMP dehydrogenase / GMP reductase domain SD85_15930 PF00005 ABC transporter SD85_15950 PF00583 Acetyltransferase (GNAT) family SD85_15960 PF01521 Iron-sulphur cluster biosynthesis SD85_15965 PF01678 Diaminopimelate epimerase SD85_15970 PF01773 Na+ dependent nucleoside transporter N-terminus SD85_15970 PF07662 Na+ dependent nucleoside transporter C-terminus SD85_15975 PF07293 Protein of unknown function (DUF1450) SD85_15980 PF07992 Pyridine nucleotide-disulphide oxidoreductase SD85_15985 PF07315 Protein of unknown function (DUF1462) SD85_15990 PF01106 NifU-like domain SD85_15995 PF00326 Prolyl oligopeptidase family SD85_15995 PF07676 WD40-like Beta Propeller Repeat SD85_16000 PF00288 GHMP kinases N terminal domain SD85_16000 PF08544 GHMP kinases C terminal SD85_16005 PF00291 Pyridoxal-phosphate dependent enzyme SD85_16010 PF03447 Homoserine dehydrogenase, NAD binding domain SD85_16010 PF00742 Homoserine dehydrogenase SD85_16010 PF01842 ACT domain SD85_16020 PF04608 Phosphatidylglycerophosphatase A SD85_16025 PF13344 Haloacid dehalogenase-like hydrolase SD85_16030 PF01934 Protein of unknown function DUF86 SD85_16035 PF06265 Protein of unknown function (DUF1027) SD85_16040 PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) SD85_16045 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family SD85_16045 PF04055 Radical SAM superfamily SD85_16050 PF01551 Peptidase family M23 SD85_16055 PF09560 Sporulation protein YunB (Spo_YunB) SD85_16060 PF08827 Domain of unknown function (DUF1805) SD85_16065 PF02872 5'-nucleotidase, C-terminal domain SD85_16070 PF01925 Sulfite exporter TauE/SafE SD85_16075 PF01904 Protein of unknown function DUF72 SD85_16085 PF01979 Amidohydrolase family SD85_16090 PF13556 PucR C-terminal helix-turn-helix domain SD85_16090 PF07905 Purine catabolism regulatory protein-like family SD85_16090 PF17853 GGDEF-like domain SD85_16095 PF00860 Permease family SD85_16100 PF00860 Permease family SD85_16105 PF01014 Uricase SD85_16105 PF09349 OHCU decarboxylase SD85_16110 PF00576 HIUase/Transthyretin family SD85_16120 PF09680 Family of unknown function SD85_16125 PF00111 2Fe-2S iron-sulfur cluster binding domain SD85_16125 PF01799 [2Fe-2S] binding domain SD85_16130 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain SD85_16130 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase SD85_16135 PF00941 FAD binding domain in molybdopterin dehydrogenase SD85_16140 PF12804 MobA-like NTP transferase domain SD85_16145 PF13478 XdhC Rossmann domain SD85_16145 PF02625 XdhC and CoxI family SD85_16150 PF00266 Aminotransferase class-V SD85_16155 PF01546 Peptidase family M20/M25/M40 SD85_16170 PF04231 Endonuclease I SD85_16175 PF03459 TOBE domain SD85_16175 PF17912 MalK OB fold domain SD85_16175 PF00005 ABC transporter SD85_16180 PF07702 UTRA domain SD85_16180 PF00392 Bacterial regulatory proteins, gntR family SD85_16185 PF00294 pfkB family carbohydrate kinase SD85_16190 PF00528 Binding-protein-dependent transport system inner membrane component SD85_16195 PF00528 Binding-protein-dependent transport system inner membrane component SD85_16200 PF01547 Bacterial extracellular solute-binding protein SD85_16205 PF01380 SIS domain SD85_16210 PF01541 GIY-YIG catalytic domain SD85_16215 PF01266 FAD dependent oxidoreductase SD85_16230 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily SD85_16240 PF01458 Uncharacterized protein family (UPF0051) SD85_16245 PF01592 NifU-like N terminal domain SD85_16250 PF00266 Aminotransferase class-V SD85_16255 PF01458 Uncharacterized protein family (UPF0051) SD85_16260 PF00005 ABC transporter SD85_16270 PF02627 Carboxymuconolactone decarboxylase family SD85_16275 PF03180 NLPA lipoprotein SD85_16280 PF00528 Binding-protein-dependent transport system inner membrane component SD85_16285 PF09383 NIL domain SD85_16285 PF00005 ABC transporter SD85_16290 PF02036 SCP-2 sterol transfer family SD85_16295 PF00085 Thioredoxin SD85_16300 PF01751 Toprim domain SD85_16305 PF10830 Protein of unknown function (DUF2553) SD85_16310 PF01597 Glycine cleavage H-protein SD85_16315 PF03960 ArsC family SD85_16320 PF00441 Acyl-CoA dehydrogenase, C-terminal domain SD85_16320 PF02771 Acyl-CoA dehydrogenase, N-terminal domain SD85_16320 PF02770 Acyl-CoA dehydrogenase, middle domain SD85_16325 PF02803 Thiolase, C-terminal domain SD85_16325 PF00108 Thiolase, N-terminal domain SD85_16330 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain SD85_16330 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain SD85_16330 PF00378 Enoyl-CoA hydratase/isomerase SD85_16335 PF14115 YuzL-like protein SD85_16340 PF01619 Proline dehydrogenase SD85_16350 PF07875 Coat F domain SD85_16355 PF01047 MarR family SD85_16360 PF07690 Major Facilitator Superfamily SD85_16365 PF14552 Tautomerase enzyme SD85_16375 PF03466 LysR substrate binding domain SD85_16375 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SD85_16380 PF10835 Protein of unknown function (DUF2573) SD85_16385 PF00005 ABC transporter SD85_16390 PF14039 YusW-like protein SD85_16400 PF00106 short chain dehydrogenase SD85_16405 PF00210 Ferritin-like domain SD85_16410 PF13180 PDZ domain SD85_16415 PF00072 Response regulator receiver domain SD85_16415 PF00486 Transcriptional regulatory protein, C terminal SD85_16420 PF00672 HAMP domain SD85_16420 PF00512 His Kinase A (phospho-acceptor) domain SD85_16420 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SD85_16430 PF00440 Bacterial regulatory proteins, tetR family SD85_16435 PF00206 Lyase SD85_16435 PF10415 Fumarase C C-terminus SD85_16440 PF13113 Protein of unknown function (DUF3970) SD85_16445 PF03323 Bacillus/Clostridium GerA spore germination protein SD85_16450 PF03845 Spore germination protein SD85_16455 PF05504 Spore germination B3/ GerAC like, C-terminal SD85_16460 PF00072 Response regulator receiver domain SD85_16460 PF00196 Bacterial regulatory proteins, luxR family SD85_16465 PF00672 HAMP domain SD85_16465 PF07730 Histidine kinase SD85_16465 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SD85_16470 PF09922 Cell wall-active antibiotics response 4TMS YvqF SD85_16475 PF13349 Putative adhesin SD85_16480 PF04012 PspA/IM30 family SD85_16490 PF07690 Major Facilitator Superfamily SD85_16495 PF01923 Cobalamin adenosyltransferase SD85_16500 PF00005 ABC transporter SD85_16505 PF01032 FecCD transport family SD85_16510 PF01497 Periplasmic binding protein SD85_16520 PF00106 short chain dehydrogenase SD85_16525 PF08450 SMP-30/Gluconolactonase/LRE-like region SD85_16530 PF00512 His Kinase A (phospho-acceptor) domain SD85_16530 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SD85_16535 PF00072 Response regulator receiver domain SD85_16535 PF00486 Transcriptional regulatory protein, C terminal SD85_16545 PF04545 Sigma-70, region 4 SD85_16550 PF12841 YvrJ protein family SD85_16555 PF00190 Cupin SD85_16560 PF14184 Regulatory protein YrvL SD85_16565 PF02687 FtsX-like permease family SD85_16565 PF12704 MacB-like periplasmic core domain SD85_16570 PF00005 ABC transporter SD85_16575 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion SD85_16580 PF00005 ABC transporter SD85_16585 PF01032 FecCD transport family SD85_16590 PF01032 FecCD transport family SD85_16595 PF01497 Periplasmic binding protein SD85_16610 PF13520 Amino acid permease SD85_16615 PF09575 Small spore protein J (Spore_SspJ) SD85_16620 PF04307 LexA-binding, inner membrane-associated putative hydrolase SD85_16625 PF00884 Sulfatase SD85_16630 PF12728 Helix-turn-helix domain SD85_16630 PF12727 PBP superfamily domain SD85_16640 PF00528 Binding-protein-dependent transport system inner membrane component SD85_16645 PF00248 Aldo/keto reductase family SD85_16655 PF00999 Sodium/hydrogen exchanger family SD85_16660 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain SD85_16660 PF01077 Nitrite and sulphite reductase 4Fe-4S domain SD85_16665 PF00258 Flavodoxin SD85_16665 PF00667 FAD binding domain SD85_16665 PF00175 Oxidoreductase NAD-binding domain SD85_16670 PF13538 UvrD-like helicase C-terminal domain SD85_16675 PF03458 UPF0126 domain SD85_16680 PF02600 Disulfide bond formation protein DsbB SD85_16685 PF13462 Thioredoxin SD85_16690 PF00403 Heavy-metal-associated domain SD85_16695 PF00403 Heavy-metal-associated domain SD85_16700 PF00403 Heavy-metal-associated domain SD85_16705 PF02583 Metal-sensitive transcriptional repressor SD85_16710 PF01408 Oxidoreductase family, NAD-binding Rossmann fold SD85_16710 PF02894 Oxidoreductase family, C-terminal alpha/beta domain SD85_16715 PF02525 Flavodoxin-like fold SD85_16725 PF00392 Bacterial regulatory proteins, gntR family SD85_16725 PF07729 FCD domain SD85_16730 PF00892 EamA-like transporter family SD85_16735 PF00106 short chain dehydrogenase SD85_16760 PF01668 SmpB protein SD85_16765 PF00773 RNB domain SD85_16765 PF08206 Ribonuclease B OB domain SD85_16765 PF00575 S1 RNA binding domain SD85_16765 PF17876 Cold shock domain SD85_16770 PF12146 Serine aminopeptidase, S33 SD85_16775 PF03840 Preprotein translocase SecG subunit SD85_16780 PF00561 alpha/beta hydrolase fold SD85_16785 PF01381 Helix-turn-helix SD85_16800 PF01638 HxlR-like helix-turn-helix SD85_16805 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SD85_16805 PF00512 His Kinase A (phospho-acceptor) domain SD85_16810 PF00072 Response regulator receiver domain SD85_16810 PF00486 Transcriptional regulatory protein, C terminal SD85_16825 PF00005 ABC transporter SD85_16835 PF02052 Gallidermin SD85_16840 PF05147 Lanthionine synthetase C-like protein SD85_16845 PF00005 ABC transporter SD85_16850 PF14028 Lantibiotic biosynthesis dehydratase C-term SD85_16850 PF04738 Lantibiotic dehydratase, N terminus SD85_16855 PF00528 Binding-protein-dependent transport system inner membrane component SD85_16860 PF04069 Substrate binding domain of ABC-type glycine betaine transport system SD85_16865 PF00528 Binding-protein-dependent transport system inner membrane component SD85_16870 PF00571 CBS domain SD85_16870 PF00005 ABC transporter SD85_16875 PF12802 MarR family SD85_16880 PF13276 HTH-like domain SD85_16880 PF00665 Integrase core domain SD85_16880 PF13333 Integrase core domain SD85_16890 PF00528 Binding-protein-dependent transport system inner membrane component SD85_16895 PF04069 Substrate binding domain of ABC-type glycine betaine transport system SD85_16900 PF00528 Binding-protein-dependent transport system inner membrane component SD85_16905 PF00005 ABC transporter SD85_16905 PF00571 CBS domain SD85_16910 PF12802 MarR family SD85_16915 PF08000 Bacterial PH domain SD85_16915 PF11724 YvbH-like oligomerisation region SD85_16925 PF13240 zinc-ribbon domain SD85_16930 PF00583 Acetyltransferase (GNAT) family SD85_16935 PF03952 Enolase, N-terminal domain SD85_16935 PF00113 Enolase, C-terminal TIM barrel domain SD85_16940 PF01676 Metalloenzyme superfamily SD85_16940 PF06415 BPG-independent PGAM N-terminus (iPGM_N) SD85_16945 PF00121 Triosephosphate isomerase SD85_16950 PF00162 Phosphoglycerate kinase SD85_16960 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain SD85_16960 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain SD85_16965 PF04198 Putative sugar-binding domain SD85_16970 PF00083 Sugar (and other) transporter SD85_16975 PF00392 Bacterial regulatory proteins, gntR family SD85_16980 PF00296 Luciferase-like monooxygenase SD85_16985 PF00892 EamA-like transporter family SD85_16990 PF00324 Amino acid permease SD85_16995 PF00704 Glycosyl hydrolases family 18 SD85_17000 PF02589 LUD domain SD85_17005 PF13183 4Fe-4S dicluster domain SD85_17005 PF02589 LUD domain SD85_17005 PF11870 Domain of unknown function (DUF3390) SD85_17010 PF02754 Cysteine-rich domain SD85_17025 PF00196 Bacterial regulatory proteins, luxR family SD85_17025 PF00072 Response regulator receiver domain SD85_17030 PF07730 Histidine kinase SD85_17030 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SD85_17040 PF00005 ABC transporter SD85_17045 PF12697 Alpha/beta hydrolase family SD85_17050 PF13426 PAS domain SD85_17050 PF07228 Stage II sporulation protein E (SpoIIE) SD85_17060 PF08532 Beta-galactosidase trimerisation domain SD85_17060 PF08533 Beta-galactosidase C-terminal domain SD85_17060 PF02449 Beta-galactosidase SD85_17065 PF00528 Binding-protein-dependent transport system inner membrane component SD85_17070 PF00528 Binding-protein-dependent transport system inner membrane component SD85_17075 PF13416 Bacterial extracellular solute-binding protein SD85_17080 PF00356 Bacterial regulatory proteins, lacI family SD85_17085 PF00392 Bacterial regulatory proteins, gntR family SD85_17085 PF07729 FCD domain SD85_17090 PF02652 L-lactate permease SD85_17095 PF04552 Sigma-54, DNA binding domain SD85_17095 PF00309 Sigma-54 factor, Activator interacting domain (AID) SD85_17095 PF04963 Sigma-54 factor, core binding domain SD85_17100 PF09628 YvfG protein SD85_17105 PF04230 Polysaccharide pyruvyl transferase SD85_17110 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family SD85_17115 PF00132 Bacterial transferase hexapeptide (six repeats) SD85_17115 PF17836 PglD N-terminal domain SD85_17120 PF02397 Bacterial sugar transferase SD85_17125 PF14667 Polysaccharide biosynthesis C-terminal domain SD85_17125 PF01943 Polysaccharide biosynthesis protein SD85_17130 PF00535 Glycosyl transferase family 2 SD85_17135 PF04230 Polysaccharide pyruvyl transferase SD85_17140 PF00535 Glycosyl transferase family 2 SD85_17150 PF00534 Glycosyl transferases group 1 SD85_17150 PF13439 Glycosyltransferase Family 4 SD85_17155 PF00535 Glycosyl transferase family 2 SD85_17160 PF00534 Glycosyl transferases group 1 SD85_17160 PF13439 Glycosyltransferase Family 4 SD85_17165 PF02719 Polysaccharide biosynthesis protein SD85_17170 PF13614 AAA domain SD85_17175 PF02706 Chain length determinant protein SD85_17180 PF01381 Helix-turn-helix SD85_17180 PF08671 Anti-repressor SinI SD85_17185 PF00135 Carboxylesterase family SD85_17195 PF05870 Phenolic acid decarboxylase (PAD) SD85_17205 PF01177 Asp/Glu/Hydantoin racemase SD85_17210 PF00144 Beta-lactamase SD85_17210 PF11954 Domain of unknown function (DUF3471) SD85_17215 PF02435 Levansucrase/Invertase SD85_17220 PF08244 Glycosyl hydrolases family 32 C terminal SD85_17220 PF00251 Glycosyl hydrolases family 32 N-terminal domain SD85_17225 PF13520 Amino acid permease SD85_17230 PF17934 Tetracyclin repressor-like, C-terminal domain SD85_17230 PF00440 Bacterial regulatory proteins, tetR family SD85_17235 PF00893 Small Multidrug Resistance protein SD85_17240 PF00893 Small Multidrug Resistance protein SD85_17245 PF11553 Protein of unknown function (DUF3231) SD85_17255 PF00574 Clp protease SD85_17260 PF03641 Possible lysine decarboxylase SD85_17265 PF03819 MazG nucleotide pyrophosphohydrolase domain SD85_17270 PF01740 STAS domain SD85_17270 PF00916 Sulfate permease family SD85_17275 PF00484 Carbonic anhydrase SD85_17280 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain SD85_17280 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain SD85_17285 PF02687 FtsX-like permease family SD85_17290 PF00005 ABC transporter SD85_17295 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SD85_17300 PF00072 Response regulator receiver domain SD85_17300 PF00486 Transcriptional regulatory protein, C terminal SD85_17310 PF00797 N-acetyltransferase SD85_17315 PF00381 PTS HPr component phosphorylation site SD85_17320 PF10298 WhiA N-terminal LAGLIDADG-like domain SD85_17320 PF14527 WhiA LAGLIDADG-like domain SD85_17320 PF02650 WhiA C-terminal HTH domain SD85_17325 PF01933 Uncharacterised protein family UPF0052 SD85_17330 PF03668 P-loop ATPase protein family SD85_17335 PF00293 NUDIX domain SD85_17340 PF07992 Pyridine nucleotide-disulphide oxidoreductase SD85_17345 PF00877 NlpC/P60 family SD85_17355 PF00005 ABC transporter SD85_17355 PF00664 ABC transporter transmembrane region SD85_17375 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase SD85_17375 PF01502 Phosphoribosyl-AMP cyclohydrolase SD85_17380 PF00977 Histidine biosynthesis protein SD85_17385 PF00977 Histidine biosynthesis protein SD85_17390 PF00117 Glutamine amidotransferase class-I SD85_17395 PF00475 Imidazoleglycerol-phosphate dehydratase SD85_17400 PF00815 Histidinol dehydrogenase SD85_17405 PF01634 ATP phosphoribosyltransferase SD85_17410 PF13393 Histidyl-tRNA synthetase SD85_17415 PF13529 Peptidase_C39 like family SD85_17420 PF03211 Pectate lyase SD85_17425 PF14602 Hexapeptide repeat of succinyl-transferase SD85_17430 PF13419 Haloacid dehalogenase-like hydrolase SD85_17435 PF07670 Nucleoside recognition SD85_17440 PF01790 Prolipoprotein diacylglyceryl transferase SD85_17445 PF02603 HPr Serine kinase N terminus SD85_17445 PF07475 HPr Serine kinase C-terminal domain SD85_17450 PF01979 Amidohydrolase family SD85_17455 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase SD85_17465 PF00149 Calcineurin-like phosphoesterase SD85_17470 PF01047 MarR family SD85_17475 PF00067 Cytochrome P450 SD85_17480 PF16715 Cyclodipeptide synthase SD85_17485 PF01047 MarR family SD85_17490 PF07690 Major Facilitator Superfamily SD85_17495 PF04020 Mycobacterial 4 TMS phage holin, superfamily IV SD85_17500 PF04024 PspC domain SD85_17505 PF13349 Putative adhesin SD85_17520 PF17760 UvrA interaction domain SD85_17520 PF17755 UvrA DNA-binding domain SD85_17520 PF00005 ABC transporter SD85_17525 PF00271 Helicase conserved C-terminal domain SD85_17525 PF12344 Ultra-violet resistance protein B SD85_17525 PF02151 UvrB/uvrC motif SD85_17525 PF17757 UvrB interaction domain SD85_17525 PF04851 Type III restriction enzyme, res subunit SD85_17530 PF09964 Uncharacterized protein conserved in bacteria (DUF2198) SD85_17535 PF00391 PEP-utilising enzyme, mobile domain SD85_17535 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain SD85_17540 PF00440 Bacterial regulatory proteins, tetR family SD85_17545 PF07690 Major Facilitator Superfamily SD85_17550 PF17820 PDZ domain SD85_17555 PF17423 Swarming motility protein SD85_17560 PF03572 Peptidase family S41 SD85_17560 PF01471 Putative peptidoglycan binding domain SD85_17560 PF17820 PDZ domain SD85_17565 PF02687 FtsX-like permease family SD85_17565 PF18075 FtsX extracellular domain SD85_17570 PF00005 ABC transporter SD85_17575 PF13442 Cytochrome C oxidase, cbb3-type, subunit III SD85_17580 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) SD85_17580 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 SD85_17585 PF00472 RF-1 domain SD85_17585 PF03462 PCRF domain SD85_17590 PF01043 SecA preprotein cross-linking domain SD85_17590 PF02810 SEC-C motif SD85_17590 PF07516 SecA Wing and Scaffold domain SD85_17590 PF07517 SecA DEAD-like domain SD85_17595 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus SD85_17595 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein SD85_17610 PF02561 Flagellar protein FliS SD85_17615 PF07195 Flagellar hook-associated protein 2 C-terminus SD85_17615 PF02465 Flagellar hook-associated protein 2 N-terminus SD85_17615 PF07196 Flagellin hook IN motif SD85_17620 PF03646 FlaG protein SD85_17625 PF00700 Bacterial flagellin C-terminal helical region SD85_17625 PF00669 Bacterial flagellin N-terminal helical region SD85_17630 PF02599 Global regulator protein family SD85_17635 PF02623 FliW protein SD85_17645 PF00669 Bacterial flagellin N-terminal helical region SD85_17645 PF00700 Bacterial flagellin C-terminal helical region SD85_17650 PF06429 Flagellar basal body rod FlgEFG protein C-terminal SD85_17650 PF00460 Flagella basal body rod protein SD85_17655 PF05130 FlgN protein SD85_17660 PF04316 Anti-sigma-28 factor, FlgM SD85_17675 PF10719 Late competence development protein ComFB SD85_17680 PF04851 Type III restriction enzyme, res subunit SD85_17680 PF00271 Helicase conserved C-terminal domain SD85_17685 PF02645 Uncharacterised protein, DegV family COG1307 SD85_17690 PF00072 Response regulator receiver domain SD85_17690 PF00196 Bacterial regulatory proteins, luxR family SD85_17695 PF05384 Sensor protein DegS SD85_17695 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SD85_17695 PF07730 Histidine kinase SD85_17700 PF01205 Uncharacterized protein family UPF0029 SD85_17700 PF09186 Domain of unknown function (DUF1949) SD85_17705 PF03816 Cell envelope-related transcriptional attenuator domain SD85_17710 PF00953 Glycosyl transferase family 4 SD85_17720 PF00535 Glycosyl transferase family 2 SD85_17725 PF02706 Chain length determinant protein SD85_17730 PF04932 O-Antigen ligase SD85_17735 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain SD85_17735 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain SD85_17735 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain SD85_17740 PF13439 Glycosyltransferase Family 4 SD85_17740 PF00534 Glycosyl transferases group 1 SD85_17745 PF01943 Polysaccharide biosynthesis protein SD85_17745 PF14667 Polysaccharide biosynthesis C-terminal domain SD85_17750 PF02397 Bacterial sugar transferase SD85_17755 PF18674 TarS beta-glycosyltransferase C-terminal domain 1 SD85_17755 PF00535 Glycosyl transferase family 2 SD85_17760 PF04122 Putative cell wall binding repeat 2 SD85_17760 PF01520 N-acetylmuramoyl-L-alanine amidase SD85_17765 PF04122 Putative cell wall binding repeat 2 SD85_17765 PF08486 Stage II sporulation protein SD85_17775 PF03816 Cell envelope-related transcriptional attenuator domain SD85_17780 PF02350 UDP-N-acetylglucosamine 2-epimerase SD85_17785 PF18674 TarS beta-glycosyltransferase C-terminal domain 1 SD85_17785 PF00535 Glycosyl transferase family 2 SD85_17790 PF00534 Glycosyl transferases group 1 SD85_17800 PF00483 Nucleotidyl transferase SD85_17805 PF00005 ABC transporter SD85_17810 PF01061 ABC-2 type transporter SD85_17825 PF00535 Glycosyl transferase family 2 SD85_17825 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase SD85_17830 PF00535 Glycosyl transferase family 2 SD85_17835 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase SD85_17840 PF01467 Cytidylyltransferase-like SD85_17845 PF03808 Glycosyl transferase WecB/TagA/CpsF family SD85_17850 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase SD85_17855 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase SD85_17860 PF08240 Alcohol dehydrogenase GroES-like domain SD85_17860 PF16912 Glucose dehydrogenase C-terminus SD85_17865 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase SD85_17870 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase SD85_17875 PF08239 Bacterial SH3 domain SD85_17875 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase SD85_17875 PF05036 Sporulation related domain SD85_17880 PF01238 Phosphomannose isomerase type I SD85_17890 PF03323 Bacillus/Clostridium GerA spore germination protein SD85_17895 PF03845 Spore germination protein SD85_17900 PF05504 Spore germination B3/ GerAC like, C-terminal SD85_17905 PF00083 Sugar (and other) transporter SD85_17910 PF03816 Cell envelope-related transcriptional attenuator domain SD85_17920 PF00877 NlpC/P60 family SD85_17930 PF09587 Bacterial capsule synthesis protein PGA_cap SD85_17935 PF14102 Capsule biosynthesis CapC SD85_17940 PF08245 Mur ligase middle domain SD85_17945 PF00356 Bacterial regulatory proteins, lacI family SD85_17950 PF00294 pfkB family carbohydrate kinase SD85_17955 PF05025 RbsD / FucU transport protein family SD85_17960 PF00005 ABC transporter SD85_17965 PF02653 Branched-chain amino acid transport system / permease component SD85_17970 PF13407 Periplasmic binding protein domain SD85_17975 PF08239 Bacterial SH3 domain SD85_17980 PF13031 Protein of unknown function (DUF3892) SD85_17985 PF02525 Flavodoxin-like fold SD85_17990 PF03306 Alpha-acetolactate decarboxylase SD85_17995 PF00205 Thiamine pyrophosphate enzyme, central domain SD85_17995 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain SD85_17995 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain SD85_18000 PF03466 LysR substrate binding domain SD85_18000 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SD85_18005 PF08757 CotH kinase protein SD85_18015 PF01613 Flavin reductase like domain SD85_18020 PF13789 Domain of unknown function (DUF4181) SD85_18030 PF01037 Lrp/AsnC ligand binding domain SD85_18030 PF13404 AsnC-type helix-turn-helix domain SD85_18035 PF02417 Chromate transporter SD85_18040 PF02417 Chromate transporter SD85_18050 PF03358 NADPH-dependent FMN reductase SD85_18055 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SD85_18055 PF03466 LysR substrate binding domain SD85_18065 PF01497 Periplasmic binding protein SD85_18065 PF12833 Helix-turn-helix domain SD85_18070 PF04493 Endonuclease V SD85_18095 PF04740 LXG domain of WXG superfamily SD85_18095 PF14449 Pre-toxin TG SD85_18095 PF14431 YwqJ-like deaminase SD85_18105 PF16888 Domain of unknown function (DUF5082) SD85_18110 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain SD85_18110 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain SD85_18110 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain SD85_18120 PF13614 AAA domain SD85_18125 PF02706 Chain length determinant protein SD85_18125 PF13807 G-rich domain on putative tyrosine kinase SD85_18135 PF04434 SWIM zinc finger SD85_18140 PF00176 SNF2 family N-terminal domain SD85_18140 PF00271 Helicase conserved C-terminal domain SD85_18140 PF12419 SNF2 Helicase protein SD85_18150 PF08220 DeoR-like helix-turn-helix domain SD85_18150 PF00455 DeoR C terminal sensor domain SD85_18155 PF00436 Single-strand binding protein family SD85_18165 PF14183 YwpF-like protein SD85_18170 PF04203 Sortase domain SD85_18180 PF00072 Response regulator receiver domain SD85_18180 PF04397 LytTr DNA-binding domain SD85_18185 PF06580 Histidine kinase SD85_18185 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SD85_18190 PF01741 Large-conductance mechanosensitive channel, MscL SD85_18195 PF07977 FabA-like domain SD85_18200 PF18801 response regulator aspartate phosphatase H, N terminal SD85_18205 PF06429 Flagellar basal body rod FlgEFG protein C-terminal SD85_18205 PF00460 Flagella basal body rod protein SD85_18210 PF06429 Flagellar basal body rod FlgEFG protein C-terminal SD85_18210 PF00460 Flagella basal body rod protein SD85_18220 PF12116 Stage III sporulation protein D SD85_18225 PF01047 MarR family SD85_18230 PF07690 Major Facilitator Superfamily SD85_18235 PF13229 Right handed beta helix region SD85_18240 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin SD85_18245 PF07690 Major Facilitator Superfamily SD85_18250 PF00857 Isochorismatase family SD85_18260 PF00909 Ammonium Transporter Family SD85_18265 PF00543 Nitrogen regulatory protein P-II SD85_18270 PF01569 PAP2 superfamily SD85_18275 PF04892 VanZ like family SD85_18280 PF01551 Peptidase family M23 SD85_18285 PF00583 Acetyltransferase (GNAT) family SD85_18290 PF17319 Family of unknown function (DUF5362) SD85_18295 PF08666 SAF domain SD85_18295 PF03102 NeuB family SD85_18300 PF17370 Family of unknown function (DUF5392) SD85_18305 PF13091 PLD-like domain SD85_18305 PF13396 Phospholipase_D-nuclease N-terminal SD85_18310 PF13411 MerR HTH family regulatory protein SD85_18310 PF07739 TipAS antibiotic-recognition domain SD85_18315 PF17319 Family of unknown function (DUF5362) SD85_18320 PF13460 NAD(P)H-binding SD85_18325 PF02082 Transcriptional regulator SD85_18330 PF01979 Amidohydrolase family SD85_18330 PF00449 Urease alpha-subunit, N-terminal domain SD85_18335 PF00699 Urease beta subunit SD85_18340 PF00547 Urease, gamma subunit SD85_18345 PF00005 ABC transporter SD85_18350 PF12399 Branched-chain amino acid ATP-binding cassette transporter SD85_18350 PF00005 ABC transporter SD85_18360 PF02653 Branched-chain amino acid transport system / permease component SD85_18370 PF05532 CsbD-like SD85_18380 PF17874 MalT-like TPR region SD85_18380 PF18801 response regulator aspartate phosphatase H, N terminal SD85_18385 PF06463 Molybdenum Cofactor Synthesis C SD85_18385 PF04055 Radical SAM superfamily SD85_18390 PF02634 FdhD/NarQ family SD85_18400 PF00092 von Willebrand factor type A domain SD85_18410 PF00092 von Willebrand factor type A domain SD85_18415 PF08486 Stage II sporulation protein SD85_18420 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) SD85_18425 PF08680 TATA-box binding SD85_18430 PF06612 Protein of unknown function (DUF1146) SD85_18440 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain SD85_18440 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain SD85_18445 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain SD85_18445 PF02874 ATP synthase alpha/beta family, beta-barrel domain SD85_18450 PF00231 ATP synthase SD85_18455 PF00306 ATP synthase alpha/beta chain, C terminal domain SD85_18455 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain SD85_18455 PF02874 ATP synthase alpha/beta family, beta-barrel domain SD85_18460 PF00213 ATP synthase delta (OSCP) subunit SD85_18465 PF00430 ATP synthase B/B' CF(0) SD85_18475 PF00137 ATP synthase subunit C SD85_18480 PF00119 ATP synthase A chain SD85_18485 PF03899 ATP synthase I chain SD85_18495 PF00464 Serine hydroxymethyltransferase SD85_18500 PF04260 Protein of unknown function (DUF436) SD85_18505 PF02502 Ribose/Galactose Isomerase SD85_18510 PF01451 Low molecular weight phosphotyrosine protein phosphatase SD85_18515 PF02659 Putative manganese efflux pump SD85_18520 PF01300 Telomere recombination SD85_18520 PF03481 Putative GTP-binding controlling metal-binding SD85_18530 PF09551 Stage II sporulation protein R (spore_II_R) SD85_18535 PF17094 Uncharacterised protein family (UPF0715) SD85_18540 PF17247 Family of unknown function (DUF5316) SD85_18545 PF05175 Methyltransferase small domain SD85_18545 PF17827 PrmC N-terminal domain SD85_18550 PF00472 RF-1 domain SD85_18550 PF03462 PCRF domain SD85_18555 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily SD85_18560 PF13411 MerR HTH family regulatory protein SD85_18565 PF03547 Membrane transport protein SD85_18570 PF00390 Malic enzyme, N-terminal domain SD85_18570 PF03949 Malic enzyme, NAD binding domain SD85_18575 PF00265 Thymidine kinase SD85_18580 PF01197 Ribosomal protein L31 SD85_18585 PF07497 Rho termination factor, RNA-binding domain SD85_18585 PF07498 Rho termination factor, N-terminal domain SD85_18585 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain SD85_18595 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded SD85_18600 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) SD85_18605 PF00923 Transaldolase/Fructose-6-phosphate aldolase SD85_18610 PF01116 Fructose-bisphosphate aldolase class-II SD85_18615 PF00072 Response regulator receiver domain SD85_18620 PF10740 Domain of unknown function (DUF2529) SD85_18625 PF06418 CTP synthase N-terminus SD85_18625 PF00117 Glutamine amidotransferase class-I SD85_18630 PF05066 HB1, ASXL, restriction endonuclease HTH domain SD85_18635 PF02771 Acyl-CoA dehydrogenase, N-terminal domain SD85_18635 PF02770 Acyl-CoA dehydrogenase, middle domain SD85_18635 PF00441 Acyl-CoA dehydrogenase, C-terminal domain SD85_18640 PF13183 4Fe-4S dicluster domain SD85_18640 PF02754 Cysteine-rich domain SD85_18645 PF13091 PLD-like domain SD85_18650 PF03851 UV-endonuclease UvdE SD85_18660 PF01872 RibD C-terminal domain SD85_18665 PF00664 ABC transporter transmembrane region SD85_18665 PF00005 ABC transporter SD85_18670 PF13396 Phospholipase_D-nuclease N-terminal SD85_18670 PF13091 PLD-like domain SD85_18680 PF02665 Nitrate reductase gamma subunit SD85_18685 PF02613 Nitrate reductase delta subunit SD85_18690 PF13247 4Fe-4S dicluster domain SD85_18690 PF14711 Respiratory nitrate reductase beta C-terminal SD85_18695 PF01568 Molydopterin dinucleotide binding domain SD85_18695 PF00384 Molybdopterin oxidoreductase SD85_18695 PF14710 Respiratory nitrate reductase alpha N-terminal SD85_18705 PF14256 YwiC-like protein SD85_18710 PF00027 Cyclic nucleotide-binding domain SD85_18710 PF00325 Bacterial regulatory proteins, crp family SD85_18715 PF07690 Major Facilitator Superfamily SD85_18720 PF03485 Arginyl tRNA synthetase N terminal domain SD85_18720 PF05746 DALR anticodon binding domain SD85_18720 PF00750 tRNA synthetases class I (R) SD85_18725 PF09148 Domain of unknown function (DUF1934) SD85_18730 PF11420 Bacteriocin subtilosin A SD85_18735 PF05402 Coenzyme PQQ synthesis protein D (PqqD) SD85_18735 PF13186 Iron-sulfur cluster-binding domain SD85_18735 PF04055 Radical SAM superfamily SD85_18745 PF00005 ABC transporter SD85_18760 PF00675 Insulinase (Peptidase family M16) SD85_18780 PF18801 response regulator aspartate phosphatase H, N terminal SD85_18785 PF11131 Rap-phr extracellular signalling SD85_18790 PF00491 Arginase family SD85_18795 PF17284 Spermidine synthase tetramerisation domain SD85_18800 PF00912 Transglycosylase SD85_18800 PF00905 Penicillin binding protein transpeptidase domain SD85_18805 PF08741 YwhD family SD85_18810 PF02163 Peptidase family M50 SD85_18815 PF01361 Tautomerase enzyme SD85_18820 PF01047 MarR family SD85_18825 PF02824 TGS domain SD85_18825 PF03129 Anticodon binding domain SD85_18825 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain SD85_18825 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) SD85_18840 PF01966 HD domain SD85_18845 PF07293 Protein of unknown function (DUF1450) SD85_18855 PF00892 EamA-like transporter family SD85_18860 PF03099 Biotin/lipoate A/B protein ligase family SD85_18865 PF03466 LysR substrate binding domain SD85_18865 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SD85_18870 PF01515 Phosphate acetyl/butaryl transferase SD85_18885 PF00155 Aminotransferase class I and II SD85_18890 PF07690 Major Facilitator Superfamily SD85_18905 PF07883 Cupin domain SD85_18915 PF07690 Major Facilitator Superfamily SD85_18920 PF00324 Amino acid permease SD85_18925 PF01546 Peptidase family M20/M25/M40 SD85_18930 PF00171 Aldehyde dehydrogenase family SD85_18935 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase SD85_18935 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain SD85_18940 PF17735 Biofilm surface layer A SD85_18945 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase SD85_18950 PF04321 RmlD substrate binding domain SD85_18955 PF16363 GDP-mannose 4,6 dehydratase SD85_18960 PF00483 Nucleotidyl transferase SD85_18965 PF04101 Glycosyltransferase family 28 C-terminal domain SD85_18970 PF02348 Cytidylyltransferase SD85_18975 PF08666 SAF domain SD85_18975 PF03102 NeuB family SD85_18980 PF00583 Acetyltransferase (GNAT) family SD85_18985 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family SD85_18990 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase SD85_18995 PF00535 Glycosyl transferase family 2 SD85_19005 PF09671 Spore coat protein (Spore_GerQ) SD85_19010 PF04241 Protein of unknown function (DUF423) SD85_19015 PF00860 Permease family SD85_19020 PF17261 Family of unknown function (DUF5327) SD85_19025 PF00171 Aldehyde dehydrogenase family SD85_19030 PF03167 Uracil DNA glycosylase superfamily SD85_19035 PF00535 Glycosyl transferase family 2 SD85_19050 PF03551 Transcriptional regulator PadR-like family SD85_19055 PF08543 Phosphomethylpyrimidine kinase SD85_19065 PF00251 Glycosyl hydrolases family 32 N-terminal domain SD85_19065 PF08244 Glycosyl hydrolases family 32 C terminal SD85_19070 PF00367 phosphotransferase system, EIIB SD85_19070 PF02378 Phosphotransferase system, EIIC SD85_19075 PF01226 Formate/nitrite transporter SD85_19080 PF03123 CAT RNA binding domain SD85_19080 PF00874 PRD domain SD85_19090 PF05922 Peptidase inhibitor I9 SD85_19090 PF13860 FlgD Ig-like domain SD85_19090 PF00082 Subtilase family SD85_19090 PF02225 PA domain SD85_19095 PF00296 Luciferase-like monooxygenase SD85_19100 PF00881 Nitroreductase family SD85_19105 PF01098 Cell cycle protein SD85_19125 PF17368 Spore morphogenesis and germination YwcE SD85_19130 PF03626 Prokaryotic Cytochrome C oxidase subunit IV SD85_19135 PF00510 Cytochrome c oxidase subunit III SD85_19140 PF00115 Cytochrome C and Quinol oxidase polypeptide I SD85_19145 PF02790 Cytochrome C oxidase subunit II, transmembrane domain SD85_19145 PF00116 Cytochrome C oxidase subunit II, periplasmic domain SD85_19150 PF04226 Transglycosylase associated protein SD85_19155 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain SD85_19155 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain SD85_19160 PF00288 GHMP kinases N terminal domain SD85_19160 PF10509 Galactokinase galactose-binding signature SD85_19160 PF08544 GHMP kinases C terminal SD85_19165 PF04138 GtrA-like protein SD85_19170 PF00440 Bacterial regulatory proteins, tetR family SD85_19175 PF08671 Anti-repressor SinI SD85_19180 PF04341 Protein of unknown function, DUF485 SD85_19185 PF00474 Sodium:solute symporter family SD85_19190 PF01323 DSBA-like thioredoxin domain SD85_19195 PF10518 TAT (twin-arginine translocation) pathway signal sequence SD85_19195 PF04261 Dyp-type peroxidase family SD85_19200 PF09375 Imelysin SD85_19205 PF02581 Thiamine monophosphate synthase SD85_19210 PF02110 Hydroxyethylthiazole kinase family SD85_19215 PF03466 LysR substrate binding domain SD85_19215 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SD85_19220 PF03788 LrgA family SD85_19225 PF04172 LrgB-like family SD85_19230 PF00005 ABC transporter SD85_19255 PF04172 LrgB-like family SD85_19260 PF12832 MFS_1 like family SD85_19265 PF09962 Uncharacterized conserved protein (DUF2196) SD85_19270 PF10672 S-adenosylmethionine-dependent methyltransferase SD85_19270 PF17785 PUA-like domain SD85_19275 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily SD85_19280 PF10924 Protein of unknown function (DUF2711) SD85_19285 PF02378 Phosphotransferase system, EIIC SD85_19290 PF00082 Subtilase family SD85_19295 PF00367 phosphotransferase system, EIIB SD85_19295 PF02378 Phosphotransferase system, EIIC SD85_19300 PF03123 CAT RNA binding domain SD85_19300 PF00874 PRD domain SD85_19305 PF01501 Glycosyl transferase family 8 SD85_19310 PF09529 Integral membrane protein (intg_mem_TP0381) SD85_19315 PF01047 MarR family SD85_19320 PF01479 S4 domain SD85_19320 PF00579 tRNA synthetases class I (W and Y) SD85_19325 PF02225 PA domain SD85_19325 PF04389 Peptidase family M28 SD85_19330 PF04607 Region found in RelA / SpoT proteins SD85_19340 PF01040 UbiA prenyltransferase family SD85_19350 PF12459 D-Ala-teichoic acid biosynthesis protein SD85_19355 PF13193 AMP-binding enzyme C-terminal domain SD85_19355 PF00501 AMP-binding enzyme SD85_19360 PF03062 MBOAT, membrane-bound O-acyltransferase family SD85_19365 PF00550 Phosphopantetheine attachment site SD85_19370 PF04914 DltD protein SD85_19375 PF00106 short chain dehydrogenase SD85_19380 PF01063 Amino-transferase class IV SD85_19385 PF11975 Family 4 glycosyl hydrolase C-terminal domain SD85_19385 PF02056 Family 4 glycosyl hydrolase SD85_19390 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit SD85_19395 PF02378 Phosphotransferase system, EIIC SD85_19400 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit SD85_19405 PF00874 PRD domain SD85_19405 PF05043 Mga helix-turn-helix domain SD85_19405 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 SD85_19405 PF08279 HTH domain SD85_19410 PF02245 Methylpurine-DNA glycosylase (MPG) SD85_19415 PF06628 Catalase-related immune-responsive SD85_19415 PF00199 Catalase SD85_19420 PF07690 Major Facilitator Superfamily SD85_19425 PF12679 ABC-2 family transporter protein SD85_19430 PF13732 Domain of unknown function (DUF4162) SD85_19430 PF00005 ABC transporter SD85_19435 PF13396 Phospholipase_D-nuclease N-terminal SD85_19445 PF17280 Family of unknown function (DUF5345) SD85_19450 PF04542 Sigma-70 region 2 SD85_19450 PF08281 Sigma-70, region 4 SD85_19455 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin SD85_19460 PF01256 Carbohydrate kinase SD85_19465 PF00664 ABC transporter transmembrane region SD85_19465 PF00005 ABC transporter SD85_19470 PF00664 ABC transporter transmembrane region SD85_19470 PF00005 ABC transporter SD85_19475 PF02322 Cytochrome bd terminal oxidase subunit II SD85_19480 PF01654 Cytochrome bd terminal oxidase subunit I SD85_19485 PF03390 2-hydroxycarboxylate transporter family SD85_19490 PF01435 Peptidase family M48 SD85_19500 PF01522 Polysaccharide deacetylase SD85_19505 PF02368 Bacterial Ig-like domain (group 2) SD85_19515 PF03459 TOBE domain SD85_19515 PF17912 MalK OB fold domain SD85_19515 PF00005 ABC transporter SD85_19520 PF13556 PucR C-terminal helix-turn-helix domain SD85_19525 PF00171 Aldehyde dehydrogenase family SD85_19530 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 SD85_19530 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) SD85_19535 PF11611 Domain of unknown function (DUF4352) SD85_19540 PF16363 GDP-mannose 4,6 dehydratase SD85_19550 PF01546 Peptidase family M20/M25/M40 SD85_19550 PF07687 Peptidase dimerisation domain SD85_19565 PF04525 LURP-one-related SD85_19570 PF01717 Cobalamin-independent synthase, Catalytic domain SD85_19575 PF01717 Cobalamin-independent synthase, Catalytic domain SD85_19585 PF01144 Coenzyme A transferase SD85_19590 PF01144 Coenzyme A transferase SD85_19605 PF08241 Methyltransferase domain SD85_19610 PF07662 Na+ dependent nucleoside transporter C-terminus SD85_19610 PF01773 Na+ dependent nucleoside transporter N-terminus SD85_19625 PF00199 Catalase SD85_19625 PF18011 C-terminal domain found in long catalases SD85_19625 PF06628 Catalase-related immune-responsive SD85_19630 PF03600 Citrate transporter SD85_19635 PF04239 Protein of unknown function (DUF421) SD85_19645 PF00232 Glycosyl hydrolase family 1 SD85_19650 PF00367 phosphotransferase system, EIIB SD85_19650 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 SD85_19650 PF02378 Phosphotransferase system, EIIC SD85_19655 PF00874 PRD domain SD85_19655 PF03123 CAT RNA binding domain SD85_19665 PF11700 Vacuole effluxer Atg22 like SD85_19670 PF03880 DbpA RNA binding domain SD85_19670 PF00270 DEAD/DEAH box helicase SD85_19670 PF00271 Helicase conserved C-terminal domain SD85_19675 PF13472 GDSL-like Lipase/Acylhydrolase family SD85_19705 PF14176 YxiJ-like protein SD85_19725 PF10898 Protein of unknown function (DUF2716) SD85_19780 PF05593 RHS Repeat SD85_19785 PF00892 EamA-like transporter family SD85_19795 PF03741 Integral membrane protein TerC family SD85_19800 PF00582 Universal stress protein family SD85_19805 PF00232 Glycosyl hydrolase family 1 SD85_19810 PF02378 Phosphotransferase system, EIIC SD85_19810 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 SD85_19810 PF00367 phosphotransferase system, EIIB SD85_19815 PF18593 CdiI immunity protein SD85_19845 PF14449 Pre-toxin TG SD85_19845 PF04740 LXG domain of WXG superfamily SD85_19855 PF16888 Domain of unknown function (DUF5082) SD85_19860 PF04616 Glycosyl hydrolases family 43 SD85_19860 PF16369 C-terminal lipocalin-like domain SD85_19865 PF02894 Oxidoreductase family, C-terminal alpha/beta domain SD85_19865 PF01408 Oxidoreductase family, NAD-binding Rossmann fold SD85_19870 PF09021 HutP SD85_19875 PF00221 Aromatic amino acid lyase SD85_19880 PF01175 Urocanase Rossmann-like domain SD85_19880 PF17392 Urocanase C-terminal domain SD85_19880 PF17391 Urocanase N-terminal domain SD85_19885 PF01979 Amidohydrolase family SD85_19890 PF00491 Arginase family SD85_19895 PF00324 Amino acid permease SD85_19900 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain SD85_19900 PF00591 Glycosyl transferase family, a/b domain SD85_19900 PF02885 Glycosyl transferase family, helical bundle domain SD85_19905 PF07662 Na+ dependent nucleoside transporter C-terminus SD85_19905 PF01773 Na+ dependent nucleoside transporter N-terminus SD85_19910 PF01791 DeoC/LacD family aldolase SD85_19915 PF04198 Putative sugar-binding domain SD85_19920 PF06724 Domain of Unknown Function (DUF1206) SD85_19925 PF04346 Ethanolamine utilisation protein, EutH SD85_19930 PF03972 MmgE/PrpD family SD85_19940 PF00005 ABC transporter SD85_19945 PF00528 Binding-protein-dependent transport system inner membrane component SD85_19950 PF00497 Bacterial extracellular solute-binding proteins, family 3 SD85_19970 PF02275 Linear amide C-N hydrolases, choloylglycine hydrolase family SD85_19985 PF11631 Protein of unknown function (DUF3255) SD85_20005 PF01497 Periplasmic binding protein SD85_20010 PF06486 Protein of unknown function (DUF1093) SD85_20015 PF02687 FtsX-like permease family SD85_20020 PF00005 ABC transporter SD85_20025 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SD85_20030 PF00486 Transcriptional regulatory protein, C terminal SD85_20030 PF00072 Response regulator receiver domain SD85_20035 PF01116 Fructose-bisphosphate aldolase class-II SD85_20040 PF01261 Xylose isomerase-like TIM barrel SD85_20045 PF01261 Xylose isomerase-like TIM barrel SD85_20050 PF01408 Oxidoreductase family, NAD-binding Rossmann fold SD85_20050 PF02894 Oxidoreductase family, C-terminal alpha/beta domain SD85_20055 PF07690 Major Facilitator Superfamily SD85_20060 PF01261 Xylose isomerase-like TIM barrel SD85_20065 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain SD85_20065 PF00205 Thiamine pyrophosphate enzyme, central domain SD85_20065 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain SD85_20070 PF00294 pfkB family carbohydrate kinase SD85_20075 PF04962 KduI/IolB family SD85_20080 PF00171 Aldehyde dehydrogenase family SD85_20085 PF08220 DeoR-like helix-turn-helix domain SD85_20085 PF00455 DeoR C terminal sensor domain SD85_20090 PF00248 Aldo/keto reductase family SD85_20100 PF10850 Protein of unknown function (DUF2653) SD85_20105 PF00083 Sugar (and other) transporter SD85_20110 PF00183 Hsp90 protein SD85_20125 PF00440 Bacterial regulatory proteins, tetR family SD85_20130 PF00171 Aldehyde dehydrogenase family SD85_20135 PF17369 Family of unknown function (DUF5391) SD85_20140 PF06271 RDD family SD85_20145 PF04235 Protein of unknown function (DUF418) SD85_20150 PF07883 Cupin domain SD85_20155 PF00440 Bacterial regulatory proteins, tetR family SD85_20160 PF00106 short chain dehydrogenase SD85_20165 PF01047 MarR family SD85_20170 PF03788 LrgA family SD85_20175 PF04172 LrgB-like family SD85_20180 PF00999 Sodium/hydrogen exchanger family SD85_20185 PF04230 Polysaccharide pyruvyl transferase SD85_20190 PF02595 Glycerate kinase family SD85_20195 PF00392 Bacterial regulatory proteins, gntR family SD85_20195 PF07729 FCD domain SD85_20200 PF02782 FGGY family of carbohydrate kinases, C-terminal domain SD85_20200 PF00370 FGGY family of carbohydrate kinases, N-terminal domain SD85_20205 PF02447 GntP family permease SD85_20210 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase SD85_20210 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain SD85_20215 PF00578 AhpC/TSA family SD85_20220 PF13192 Thioredoxin domain SD85_20220 PF07992 Pyridine nucleotide-disulphide oxidoreductase SD85_20230 PF00232 Glycosyl hydrolase family 1 SD85_20235 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 SD85_20235 PF00367 phosphotransferase system, EIIB SD85_20235 PF02378 Phosphotransferase system, EIIC SD85_20240 PF07702 UTRA domain SD85_20240 PF00392 Bacterial regulatory proteins, gntR family SD85_20250 PF06874 Firmicute fructose-1,6-bisphosphatase SD85_20255 PF00145 C-5 cytosine-specific DNA methylase SD85_20280 PF02590 Predicted SPOUT methyltransferase SD85_20310 PF00583 Acetyltransferase (GNAT) family SD85_20315 PF18801 response regulator aspartate phosphatase H, N terminal SD85_20325 PF00491 Arginase family SD85_20330 PF00324 Amino acid permease SD85_20335 PF00202 Aminotransferase class-III SD85_20340 PF02954 Bacterial regulatory protein, Fis family SD85_20340 PF13426 PAS domain SD85_20340 PF00158 Sigma-54 interaction domain SD85_20350 PF13180 PDZ domain SD85_20355 PF00753 Metallo-beta-lactamase superfamily SD85_20360 PF09648 YycH protein SD85_20365 PF07435 YycH protein SD85_20370 PF00672 HAMP domain SD85_20370 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SD85_20370 PF00512 His Kinase A (phospho-acceptor) domain SD85_20370 PF13426 PAS domain SD85_20375 PF00072 Response regulator receiver domain SD85_20375 PF00486 Transcriptional regulatory protein, C terminal SD85_20400 PF00709 Adenylosuccinate synthetase SD85_20405 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily SD85_20410 PF00772 DnaB-like helicase N terminal domain SD85_20410 PF03796 DnaB-like helicase C terminal domain SD85_20420 PF09954 Uncharacterized protein conserved in bacteria (DUF2188) SD85_20430 PF14174 YycC-like protein SD85_20435 PF07690 Major Facilitator Superfamily SD85_20440 PF13231 Dolichyl-phosphate-mannose-protein mannosyltransferase SD85_20445 PF01281 Ribosomal protein L9, N-terminal domain SD85_20445 PF03948 Ribosomal protein L9, C-terminal domain SD85_20450 PF02272 DHHA1 domain SD85_20450 PF01368 DHH family SD85_20455 PF09991 Predicted membrane protein (DUF2232) SD85_20465 PF07875 Coat F domain SD85_20470 PF01638 HxlR-like helix-turn-helix SD85_20475 PF02833 DHHA2 domain SD85_20475 PF01368 DHH family SD85_20490 PF07690 Major Facilitator Superfamily SD85_20505 PF07690 Major Facilitator Superfamily SD85_20510 PF03466 LysR substrate binding domain SD85_20510 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SD85_20515 PF13673 Acetyltransferase (GNAT) domain SD85_20525 PF00753 Metallo-beta-lactamase superfamily SD85_20530 PF01638 HxlR-like helix-turn-helix SD85_20540 PF01047 MarR family SD85_20545 PF13673 Acetyltransferase (GNAT) domain SD85_20555 PF03190 Protein of unknown function, DUF255 SD85_20560 PF02517 CPBP intramembrane metalloprotease SD85_20565 PF00083 Sugar (and other) transporter SD85_20570 PF12464 Maltose acetyltransferase SD85_20570 PF14602 Hexapeptide repeat of succinyl-transferase SD85_20575 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily SD85_20580 PF00356 Bacterial regulatory proteins, lacI family SD85_20580 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family SD85_20585 PF03372 Endonuclease/Exonuclease/phosphatase family SD85_20590 PF01084 Ribosomal protein S18 SD85_20595 PF00436 Single-strand binding protein family SD85_20600 PF01250 Ribosomal protein S6 SD85_20605 PF06071 Protein of unknown function (DUF933) SD85_20605 PF01926 50S ribosome-binding GTPase SD85_20610 PF04879 Molybdopterin oxidoreductase Fe4S4 domain SD85_20610 PF00384 Molybdopterin oxidoreductase SD85_20610 PF01568 Molydopterin dinucleotide binding domain SD85_20615 PF06107 Bacterial protein of unknown function (DUF951) SD85_20625 PF06866 Protein of unknown function (DUF1256) SD85_20630 PF02195 ParB-like nuclease domain SD85_20630 PF17762 HTH domain found in ParB protein SD85_20635 PF13614 AAA domain SD85_20640 PF06713 Bacterial PH domain SD85_20645 PF17762 HTH domain found in ParB protein SD85_20645 PF02195 ParB-like nuclease domain SD85_20650 PF02527 rRNA small subunit methyltransferase G SD85_20655 PF13932 GidA associated domain SD85_20655 PF01134 Glucose inhibited division protein A SD85_20660 PF12631 MnmE helical domain SD85_20660 PF10396 GTP-binding protein TrmE N-terminus SD85_20660 PF01926 50S ribosome-binding GTPase SD85_20665 PF01424 R3H domain SD85_20665 PF14804 Jag N-terminus SD85_20670 PF02096 60Kd inner membrane protein SD85_20675 PF00825 Ribonuclease P SD85_20680 PF00468 Ribosomal protein L34