GYO_2877 df51e086c82d57b3287fd2c2022c15f3 214 ProSitePatterns PS00622 LuxR-type HTH domain signature. 164 191 - T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 GYO_2877 df51e086c82d57b3287fd2c2022c15f3 214 Gene3D G3DSA:3.40.50.12740 2 210 9.6E-61 T 14-10-2018 GYO_2877 df51e086c82d57b3287fd2c2022c15f3 214 SUPERFAMILY SSF46894 135 211 8.5E-21 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 GYO_2877 df51e086c82d57b3287fd2c2022c15f3 214 Pfam PF00072 Response regulator receiver domain 4 116 9.0E-26 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 GYO_2877 df51e086c82d57b3287fd2c2022c15f3 214 Pfam PF00196 Bacterial regulatory proteins, luxR family 149 204 5.3E-20 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 GYO_2877 df51e086c82d57b3287fd2c2022c15f3 214 SUPERFAMILY SSF52172 2 130 6.55E-31 T 14-10-2018 IPR011006 CheY-like superfamily GYO_2877 df51e086c82d57b3287fd2c2022c15f3 214 SMART SM00421 147 204 2.0E-20 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 GYO_2877 df51e086c82d57b3287fd2c2022c15f3 214 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 180 192 4.3E-14 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 GYO_2877 df51e086c82d57b3287fd2c2022c15f3 214 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 150 164 4.3E-14 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 GYO_2877 df51e086c82d57b3287fd2c2022c15f3 214 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 164 180 4.3E-14 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 GYO_2877 df51e086c82d57b3287fd2c2022c15f3 214 SMART SM00448 2 116 7.6E-28 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 GYO_1451 04810cf8852e88a458e5fc8ec092c128 305 ProSitePatterns PS00211 ABC transporters family signature. 151 165 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 GYO_1451 04810cf8852e88a458e5fc8ec092c128 305 SMART SM00382 34 228 5.4E-14 T 14-10-2018 IPR003593 AAA+ ATPase domain GYO_1451 04810cf8852e88a458e5fc8ec092c128 305 Pfam PF00005 ABC transporter 26 178 2.8E-33 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 GYO_1451 04810cf8852e88a458e5fc8ec092c128 305 SUPERFAMILY SSF52540 5 250 1.3E-76 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase GYO_1451 04810cf8852e88a458e5fc8ec092c128 305 Gene3D G3DSA:3.40.50.300 3 304 5.4E-94 T 14-10-2018 GYO_1451 04810cf8852e88a458e5fc8ec092c128 305 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 230 280 1.3E-8 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 GYO_0434 7533ccd4187ca314892a7580b9dc57b0 249 Pfam PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase 10 231 1.7E-24 T 14-10-2018 IPR006148 Glucosamine/galactosamine-6-phosphate isomerase GO:0005975 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906 GYO_0434 7533ccd4187ca314892a7580b9dc57b0 249 Hamap MF_01241 Glucosamine-6-phosphate deaminase [nagB]. 1 243 44.231 T 14-10-2018 IPR004547 Glucosamine-6-phosphate isomerase GO:0004342|GO:0006044 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906|Reactome: R-HSA-70171 GYO_0434 7533ccd4187ca314892a7580b9dc57b0 249 TIGRFAM TIGR00502 nagB: glucosamine-6-phosphate deaminase 1 247 1.9E-120 T 14-10-2018 IPR004547 Glucosamine-6-phosphate isomerase GO:0004342|GO:0006044 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906|Reactome: R-HSA-70171 GYO_0434 7533ccd4187ca314892a7580b9dc57b0 249 Gene3D G3DSA:3.40.50.1360 1 249 1.2E-103 T 14-10-2018 GYO_0434 7533ccd4187ca314892a7580b9dc57b0 249 SUPERFAMILY SSF100950 1 246 3.4E-95 T 14-10-2018 IPR037171 NagB/RpiA transferase-like GYO_1049 4fe19bc7505fc51fd0978f70162c3e91 1415 Pfam PF00149 Calcineurin-like phosphoesterase 622 851 9.7E-17 T 14-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 GYO_1049 4fe19bc7505fc51fd0978f70162c3e91 1415 Pfam PF00149 Calcineurin-like phosphoesterase 1 237 3.5E-14 T 14-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 GYO_1049 4fe19bc7505fc51fd0978f70162c3e91 1415 Pfam PF02872 5'-nucleotidase, C-terminal domain 328 525 8.2E-25 T 14-10-2018 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 GYO_1049 4fe19bc7505fc51fd0978f70162c3e91 1415 Pfam PF02872 5'-nucleotidase, C-terminal domain 930 1092 1.2E-47 T 14-10-2018 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 GYO_1049 4fe19bc7505fc51fd0978f70162c3e91 1415 ProSitePatterns PS00786 5'-nucleotidase signature 2. 87 98 - T 14-10-2018 IPR006146 5'-Nucleotidase, conserved site GO:0000166|GO:0016788|GO:0046872 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 GYO_1049 4fe19bc7505fc51fd0978f70162c3e91 1415 PRINTS PR01607 Apyrase family signature 1066 1085 7.6E-42 T 14-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 GYO_1049 4fe19bc7505fc51fd0978f70162c3e91 1415 PRINTS PR01607 Apyrase family signature 988 1011 7.6E-42 T 14-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 GYO_1049 4fe19bc7505fc51fd0978f70162c3e91 1415 PRINTS PR01607 Apyrase family signature 620 638 7.6E-42 T 14-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 GYO_1049 4fe19bc7505fc51fd0978f70162c3e91 1415 PRINTS PR01607 Apyrase family signature 834 857 7.6E-42 T 14-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 GYO_1049 4fe19bc7505fc51fd0978f70162c3e91 1415 PRINTS PR01607 Apyrase family signature 865 885 7.6E-42 T 14-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 GYO_1049 4fe19bc7505fc51fd0978f70162c3e91 1415 PRINTS PR01607 Apyrase family signature 815 832 7.6E-42 T 14-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 GYO_1049 4fe19bc7505fc51fd0978f70162c3e91 1415 SUPERFAMILY SSF56300 1 326 3.28E-84 T 14-10-2018 GYO_1049 4fe19bc7505fc51fd0978f70162c3e91 1415 Gene3D G3DSA:3.90.780.10 376 563 7.4E-59 T 14-10-2018 IPR036907 5'-Nucleotidase, C-terminal domain superfamily GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 GYO_1049 4fe19bc7505fc51fd0978f70162c3e91 1415 SUPERFAMILY SSF55816 328 564 2.62E-46 T 14-10-2018 IPR036907 5'-Nucleotidase, C-terminal domain superfamily GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 GYO_1049 4fe19bc7505fc51fd0978f70162c3e91 1415 Gene3D G3DSA:3.60.21.10 1 327 5.2E-144 T 14-10-2018 IPR029052 Metallo-dependent phosphatase-like GYO_1049 4fe19bc7505fc51fd0978f70162c3e91 1415 ProSitePatterns PS00785 5'-nucleotidase signature 1. 622 634 - T 14-10-2018 IPR006146 5'-Nucleotidase, conserved site GO:0000166|GO:0016788|GO:0046872 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 GYO_1049 4fe19bc7505fc51fd0978f70162c3e91 1415 Gene3D G3DSA:3.60.21.10 620 929 8.6E-91 T 14-10-2018 IPR029052 Metallo-dependent phosphatase-like GYO_1049 4fe19bc7505fc51fd0978f70162c3e91 1415 SUPERFAMILY SSF56300 616 928 4.79E-78 T 14-10-2018 GYO_1049 4fe19bc7505fc51fd0978f70162c3e91 1415 SUPERFAMILY SSF55816 928 1128 5.1E-62 T 14-10-2018 IPR036907 5'-Nucleotidase, C-terminal domain superfamily GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 GYO_1049 4fe19bc7505fc51fd0978f70162c3e91 1415 Gene3D G3DSA:3.90.780.10 930 1131 3.6E-72 T 14-10-2018 IPR036907 5'-Nucleotidase, C-terminal domain superfamily GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 GYO_3656 c8b7e25494263c564a6d1045b8d82ea8 605 Gene3D G3DSA:2.40.30.10 233 445 1.1E-74 T 14-10-2018 GYO_3656 c8b7e25494263c564a6d1045b8d82ea8 605 SUPERFAMILY SSF52218 66 211 1.81E-50 T 14-10-2018 IPR029039 Flavoprotein-like superfamily GYO_3656 c8b7e25494263c564a6d1045b8d82ea8 605 PIRSF PIRSF000207 1 605 2.0E-270 T 14-10-2018 IPR010199 Sulphite reductase [NADPH] flavoprotein, alpha chain GO:0004783|GO:0010181|GO:0019344|GO:0050660|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 GYO_3656 c8b7e25494263c564a6d1045b8d82ea8 605 PRINTS PR00369 Flavodoxin signature 173 192 3.2E-16 T 14-10-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 GYO_3656 c8b7e25494263c564a6d1045b8d82ea8 605 PRINTS PR00369 Flavodoxin signature 69 82 3.2E-16 T 14-10-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 GYO_3656 c8b7e25494263c564a6d1045b8d82ea8 605 PRINTS PR00369 Flavodoxin signature 149 159 3.2E-16 T 14-10-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 GYO_3656 c8b7e25494263c564a6d1045b8d82ea8 605 PRINTS PR00369 Flavodoxin signature 117 128 3.2E-16 T 14-10-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 GYO_3656 c8b7e25494263c564a6d1045b8d82ea8 605 SUPERFAMILY SSF63380 230 451 1.84E-64 T 14-10-2018 IPR017938 Riboflavin synthase-like beta-barrel GYO_3656 c8b7e25494263c564a6d1045b8d82ea8 605 Gene3D G3DSA:3.40.50.360 59 218 4.4E-52 T 14-10-2018 IPR029039 Flavoprotein-like superfamily GYO_3656 c8b7e25494263c564a6d1045b8d82ea8 605 Pfam PF00258 Flavodoxin 70 194 1.7E-34 T 14-10-2018 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 GYO_3656 c8b7e25494263c564a6d1045b8d82ea8 605 Pfam PF00667 FAD binding domain 233 428 2.0E-33 T 14-10-2018 IPR003097 Sulfite reductase [NADPH] flavoprotein alpha-component-like, FAD-binding GO:0016491|GO:0055114 GYO_3656 c8b7e25494263c564a6d1045b8d82ea8 605 Pfam PF00175 Oxidoreductase NAD-binding domain 463 569 5.1E-18 T 14-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 GYO_3656 c8b7e25494263c564a6d1045b8d82ea8 605 Gene3D G3DSA:1.20.990.10 281 390 1.1E-74 T 14-10-2018 IPR023173 NADPH-cytochrome p450 reductase, FAD-binding, alpha-helical domain superfamily GO:0016491|GO:0055114 GYO_3656 c8b7e25494263c564a6d1045b8d82ea8 605 TIGRFAM TIGR01931 cysJ: sulfite reductase [NADPH] flavoprotein, alpha-component 6 605 2.7E-276 T 14-10-2018 IPR010199 Sulphite reductase [NADPH] flavoprotein, alpha chain GO:0004783|GO:0010181|GO:0019344|GO:0050660|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 GYO_3656 c8b7e25494263c564a6d1045b8d82ea8 605 SUPERFAMILY SSF52343 450 605 9.04E-52 T 14-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain GYO_3656 c8b7e25494263c564a6d1045b8d82ea8 605 Gene3D G3DSA:3.40.50.80 451 605 7.0E-60 T 14-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain GYO_3656 c8b7e25494263c564a6d1045b8d82ea8 605 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 487 496 7.0E-28 T 14-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 GYO_3656 c8b7e25494263c564a6d1045b8d82ea8 605 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 531 547 7.0E-28 T 14-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 GYO_3656 c8b7e25494263c564a6d1045b8d82ea8 605 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 271 281 7.0E-28 T 14-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 GYO_3656 c8b7e25494263c564a6d1045b8d82ea8 605 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 392 399 7.0E-28 T 14-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 GYO_3656 c8b7e25494263c564a6d1045b8d82ea8 605 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 462 481 7.0E-28 T 14-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 GYO_3656 c8b7e25494263c564a6d1045b8d82ea8 605 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 554 562 7.0E-28 T 14-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 GYO_3656 c8b7e25494263c564a6d1045b8d82ea8 605 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 500 511 7.0E-28 T 14-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 GYO_3006 ceddbb05b690fe7b2802b4cb3959c837 98 Pfam PF13797 Post-transcriptional regulator 7 87 1.9E-32 T 14-10-2018 IPR025716 Post-transcriptional regulator GYO_3228 354351ef11c6a2c2b1c25573636520e5 1020 Gene3D G3DSA:3.30.980.40 557 660 1.1E-35 T 14-10-2018 GYO_3228 354351ef11c6a2c2b1c25573636520e5 1020 SMART SM00382 699 876 2.5E-4 T 14-10-2018 IPR003593 AAA+ ATPase domain GYO_3228 354351ef11c6a2c2b1c25573636520e5 1020 Pfam PF09397 Ftsk gamma domain 952 1013 9.3E-31 T 14-10-2018 IPR018541 FtsK gamma domain GYO_3228 354351ef11c6a2c2b1c25573636520e5 1020 SMART SM00843 950 1015 4.1E-40 T 14-10-2018 IPR018541 FtsK gamma domain GYO_3228 354351ef11c6a2c2b1c25573636520e5 1020 SUPERFAMILY SSF46785 951 1015 5.83E-23 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily GYO_3228 354351ef11c6a2c2b1c25573636520e5 1020 Pfam PF01580 FtsK/SpoIIIE family 664 803 4.8E-51 T 14-10-2018 IPR002543 FtsK domain GO:0000166|GO:0003677|GO:0005524 GYO_3228 354351ef11c6a2c2b1c25573636520e5 1020 SUPERFAMILY SSF52540 638 927 1.45E-48 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase GYO_3228 354351ef11c6a2c2b1c25573636520e5 1020 Gene3D G3DSA:1.10.10.10 944 1011 3.4E-28 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily GYO_3228 354351ef11c6a2c2b1c25573636520e5 1020 Gene3D G3DSA:3.40.50.300 661 940 6.1E-113 T 14-10-2018 GYO_2233 ea60a1bddde766c0b497956604c52bd0 487 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 7 244 4.6E-37 T 14-10-2018 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 GYO_2233 ea60a1bddde766c0b497956604c52bd0 487 Gene3D G3DSA:3.30.420.40 3 242 7.4E-49 T 14-10-2018 GYO_2233 ea60a1bddde766c0b497956604c52bd0 487 SUPERFAMILY SSF53067 7 248 5.18E-44 T 14-10-2018 GYO_2233 ea60a1bddde766c0b497956604c52bd0 487 SUPERFAMILY SSF53067 253 478 7.61E-25 T 14-10-2018 GYO_2233 ea60a1bddde766c0b497956604c52bd0 487 PIRSF PIRSF000538 4 484 1.7E-63 T 14-10-2018 IPR000577 Carbohydrate kinase, FGGY GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 GYO_2233 ea60a1bddde766c0b497956604c52bd0 487 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 347 439 9.4E-13 T 14-10-2018 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 GYO_2233 ea60a1bddde766c0b497956604c52bd0 487 Gene3D G3DSA:3.30.420.40 243 484 2.0E-28 T 14-10-2018 GYO_4322 a4c7d01aed930cc0990f929128cba98c 382 Pfam PF13472 GDSL-like Lipase/Acylhydrolase family 184 364 7.8E-16 T 14-10-2018 IPR013830 SGNH hydrolase-type esterase domain GYO_4322 a4c7d01aed930cc0990f929128cba98c 382 Gene3D G3DSA:3.40.50.1110 177 381 9.0E-59 T 14-10-2018 IPR036514 SGNH hydrolase superfamily GYO_4322 a4c7d01aed930cc0990f929128cba98c 382 SUPERFAMILY SSF49785 30 173 2.38E-40 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily GYO_4322 a4c7d01aed930cc0990f929128cba98c 382 Gene3D G3DSA:2.60.120.430 16 176 2.0E-63 T 14-10-2018 GYO_4322 a4c7d01aed930cc0990f929128cba98c 382 SUPERFAMILY SSF52266 177 377 1.38E-50 T 14-10-2018 GYO_2949 eec73a591d7476dee8a041041b49d324 166 Gene3D G3DSA:1.10.10.10 98 162 1.7E-19 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily GYO_2949 eec73a591d7476dee8a041041b49d324 166 SUPERFAMILY SSF88659 102 160 1.53E-16 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like GYO_2949 eec73a591d7476dee8a041041b49d324 166 Pfam PF04542 Sigma-70 region 2 15 81 5.2E-12 T 14-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 GYO_2949 eec73a591d7476dee8a041041b49d324 166 Pfam PF08281 Sigma-70, region 4 105 155 3.8E-16 T 14-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 GYO_2949 eec73a591d7476dee8a041041b49d324 166 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 14 159 4.2E-26 T 14-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 GYO_2949 eec73a591d7476dee8a041041b49d324 166 Gene3D G3DSA:1.10.1740.10 2 82 1.5E-16 T 14-10-2018 GYO_2949 eec73a591d7476dee8a041041b49d324 166 ProSitePatterns PS01063 Sigma-70 factors ECF subfamily signature. 36 67 - T 14-10-2018 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 GYO_2949 eec73a591d7476dee8a041041b49d324 166 SUPERFAMILY SSF88946 13 92 6.28E-16 T 14-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 GYO_1070 9996bd8c272c94559a487d0a515a31f7 190 Gene3D G3DSA:3.40.630.30 4 185 1.1E-43 T 14-10-2018 GYO_1070 9996bd8c272c94559a487d0a515a31f7 190 SUPERFAMILY SSF55729 2 175 3.99E-47 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase GYO_1070 9996bd8c272c94559a487d0a515a31f7 190 Pfam PF13302 Acetyltransferase (GNAT) domain 11 150 7.2E-28 T 14-10-2018 IPR000182 GNAT domain GYO_4433 9206cfd456067a8f9a1ac4812ace1d90 403 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 76 90 - T 14-10-2018 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 GYO_4433 9206cfd456067a8f9a1ac4812ace1d90 403 SUPERFAMILY SSF51735 172 362 4.58E-63 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily GYO_4433 9206cfd456067a8f9a1ac4812ace1d90 403 TIGRFAM TIGR02819 fdhA_non_GSH: formaldehyde dehydrogenase, glutathione-independent 2 402 4.1E-236 T 14-10-2018 IPR014184 Formaldehyde dehydrogenase, glutathione-independent GO:0016491|GO:0055114 GYO_4433 9206cfd456067a8f9a1ac4812ace1d90 403 Pfam PF00107 Zinc-binding dehydrogenase 206 275 5.5E-11 T 14-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 GYO_4433 9206cfd456067a8f9a1ac4812ace1d90 403 Gene3D G3DSA:3.90.180.10 44 387 6.4E-133 T 14-10-2018 GYO_4433 9206cfd456067a8f9a1ac4812ace1d90 403 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 44 153 1.9E-24 T 14-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 GYO_4433 9206cfd456067a8f9a1ac4812ace1d90 403 Gene3D G3DSA:3.40.50.720 187 350 6.4E-133 T 14-10-2018 GYO_4433 9206cfd456067a8f9a1ac4812ace1d90 403 SUPERFAMILY SSF50129 4 200 1.45E-57 T 14-10-2018 IPR011032 GroES-like superfamily GYO_1220 856d358fb0c25b2205e02dadb946bc45 380 SMART SM00065 24 175 2.6E-5 T 14-10-2018 IPR003018 GAF domain GO:0005515 GYO_1220 856d358fb0c25b2205e02dadb946bc45 380 SUPERFAMILY SSF55874 262 371 7.73E-15 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily GYO_1220 856d358fb0c25b2205e02dadb946bc45 380 SMART SM00387 279 373 1.2E-4 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase GYO_1220 856d358fb0c25b2205e02dadb946bc45 380 Pfam PF07730 Histidine kinase 182 246 5.3E-18 T 14-10-2018 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 GYO_1220 856d358fb0c25b2205e02dadb946bc45 380 Pfam PF13185 GAF domain 23 166 7.2E-17 T 14-10-2018 IPR003018 GAF domain GO:0005515 GYO_1220 856d358fb0c25b2205e02dadb946bc45 380 Gene3D G3DSA:3.30.450.40 2 178 3.5E-23 T 14-10-2018 IPR029016 GAF-like domain superfamily GYO_1220 856d358fb0c25b2205e02dadb946bc45 380 SUPERFAMILY SSF55781 27 170 1.0E-19 T 14-10-2018 GYO_1220 856d358fb0c25b2205e02dadb946bc45 380 Gene3D G3DSA:3.30.565.10 250 371 6.6E-22 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily GYO_2068 65da6fa0e1abaf977e5327b15c2f6ef2 82 SUPERFAMILY SSF47336 1 79 5.1E-12 T 14-10-2018 IPR036736 ACP-like superfamily GYO_2068 65da6fa0e1abaf977e5327b15c2f6ef2 82 Gene3D G3DSA:1.10.1200.10 1 79 2.3E-19 T 14-10-2018 IPR036736 ACP-like superfamily GYO_2068 65da6fa0e1abaf977e5327b15c2f6ef2 82 Pfam PF00550 Phosphopantetheine attachment site 9 74 6.1E-8 T 14-10-2018 IPR009081 Phosphopantetheine binding ACP domain GYO_3715 d3f5cad06fb967f8df216515e777db8d 253 Hamap MF_00147_B Triosephosphate isomerase [tpiA]. 2 249 61.221 T 14-10-2018 IPR022896 Triosephosphate isomerase, bacterial/eukaryotic GO:0004807|GO:0006096 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 GYO_3715 d3f5cad06fb967f8df216515e777db8d 253 Pfam PF00121 Triosephosphate isomerase 5 246 9.2E-95 T 14-10-2018 IPR000652 Triosephosphate isomerase GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 GYO_3715 d3f5cad06fb967f8df216515e777db8d 253 TIGRFAM TIGR00419 tim: triose-phosphate isomerase 5 240 2.3E-58 T 14-10-2018 IPR000652 Triosephosphate isomerase GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 GYO_3715 d3f5cad06fb967f8df216515e777db8d 253 SUPERFAMILY SSF51351 1 248 1.96E-93 T 14-10-2018 IPR035990 Triosephosphate isomerase superfamily GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 GYO_3715 d3f5cad06fb967f8df216515e777db8d 253 ProSitePatterns PS00171 Triosephosphate isomerase active site. 165 175 - T 14-10-2018 IPR020861 Triosephosphate isomerase, active site GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 GYO_3715 d3f5cad06fb967f8df216515e777db8d 253 Gene3D G3DSA:3.20.20.70 2 252 2.1E-104 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 GYO_1229 f114e08b32809705cc24172f41048cce 458 ProSitePatterns PS00123 Alkaline phosphatase active site. 102 110 - T 14-10-2018 IPR018299 Alkaline phosphatase, active site GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 GYO_1229 f114e08b32809705cc24172f41048cce 458 Pfam PF00245 Alkaline phosphatase 46 455 6.8E-146 T 14-10-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 GYO_1229 f114e08b32809705cc24172f41048cce 458 PRINTS PR00113 Alkaline phosphatase signature 139 159 1.1E-43 T 14-10-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 GYO_1229 f114e08b32809705cc24172f41048cce 458 PRINTS PR00113 Alkaline phosphatase signature 46 66 1.1E-43 T 14-10-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 GYO_1229 f114e08b32809705cc24172f41048cce 458 PRINTS PR00113 Alkaline phosphatase signature 189 199 1.1E-43 T 14-10-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 GYO_1229 f114e08b32809705cc24172f41048cce 458 PRINTS PR00113 Alkaline phosphatase signature 255 284 1.1E-43 T 14-10-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 GYO_1229 f114e08b32809705cc24172f41048cce 458 PRINTS PR00113 Alkaline phosphatase signature 102 117 1.1E-43 T 14-10-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 GYO_1229 f114e08b32809705cc24172f41048cce 458 Gene3D G3DSA:3.40.720.10 50 446 6.8E-141 T 14-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 GYO_1229 f114e08b32809705cc24172f41048cce 458 SMART SM00098 47 457 7.1E-243 T 14-10-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 GYO_1229 f114e08b32809705cc24172f41048cce 458 Gene3D G3DSA:1.10.60.40 331 416 6.8E-141 T 14-10-2018 GYO_1229 f114e08b32809705cc24172f41048cce 458 SUPERFAMILY SSF53649 29 456 2.45E-124 T 14-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 GYO_3118 7544003d56a293a0443d44fed6850f63 598 Pfam PF13722 5TM C-terminal transporter carbon starvation CstA 416 537 7.6E-29 T 14-10-2018 IPR025299 CstA, C-terminal domain GYO_3118 7544003d56a293a0443d44fed6850f63 598 Pfam PF02554 Carbon starvation protein CstA 1 366 3.8E-146 T 14-10-2018 IPR003706 CstA, N-terminal domain GO:0009267|GO:0016020 GYO_2087 9d26516c13b2c6d3c63581d1ce70cf8b 117 SUPERFAMILY SSF103481 5 105 7.45E-20 T 14-10-2018 GYO_2087 9d26516c13b2c6d3c63581d1ce70cf8b 117 Pfam PF00893 Small Multidrug Resistance protein 4 94 1.6E-30 T 14-10-2018 IPR000390 Small multidrug resistance protein family GO:0016021 GYO_2087 9d26516c13b2c6d3c63581d1ce70cf8b 117 Gene3D G3DSA:1.10.3730.20 1 108 9.7E-34 T 14-10-2018 GYO_1846 ce0fe932fc1f359636f1ac154e9fd414 184 SUPERFAMILY SSF53335 1 180 1.81E-48 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase GYO_1846 ce0fe932fc1f359636f1ac154e9fd414 184 Gene3D G3DSA:3.40.50.150 1 183 6.9E-58 T 14-10-2018 GYO_1846 ce0fe932fc1f359636f1ac154e9fd414 184 TIGRFAM TIGR00095 TIGR00095: 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD 2 182 5.4E-67 T 14-10-2018 IPR004398 RNA methyltransferase, RsmD GO:0008168|GO:0031167 GYO_1846 ce0fe932fc1f359636f1ac154e9fd414 184 Pfam PF03602 Conserved hypothetical protein 95 1 181 1.3E-58 T 14-10-2018 GYO_1846 ce0fe932fc1f359636f1ac154e9fd414 184 PIRSF PIRSF004553 1 183 2.1E-50 T 14-10-2018 IPR004398 RNA methyltransferase, RsmD GO:0008168|GO:0031167 GYO_0909 c158d1e98fcec5fadf3018fed307331b 476 Gene3D G3DSA:3.40.50.2020 271 435 4.1E-178 T 14-10-2018 GYO_0909 c158d1e98fcec5fadf3018fed307331b 476 SUPERFAMILY SSF56235 12 238 5.75E-70 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal GYO_0909 c158d1e98fcec5fadf3018fed307331b 476 Pfam PF00156 Phosphoribosyl transferase domain 276 382 3.4E-7 T 14-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 GYO_0909 c158d1e98fcec5fadf3018fed307331b 476 Gene3D G3DSA:3.60.20.10 12 458 4.1E-178 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal GYO_0909 c158d1e98fcec5fadf3018fed307331b 476 Pfam PF13522 Glutamine amidotransferase domain 69 205 1.3E-21 T 14-10-2018 GYO_0909 c158d1e98fcec5fadf3018fed307331b 476 SUPERFAMILY SSF53271 247 469 1.44E-76 T 14-10-2018 IPR029057 Phosphoribosyltransferase-like GYO_0909 c158d1e98fcec5fadf3018fed307331b 476 TIGRFAM TIGR01134 purF: amidophosphoribosyltransferase 12 457 1.4E-174 T 14-10-2018 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|Reactome: R-HSA-73817 GYO_0909 c158d1e98fcec5fadf3018fed307331b 476 PIRSF PIRSF000485 8 473 2.9E-192 T 14-10-2018 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|Reactome: R-HSA-73817 GYO_0909 c158d1e98fcec5fadf3018fed307331b 476 Hamap MF_01931 Amidophosphoribosyltransferase [purF]. 11 456 47.362 T 14-10-2018 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|Reactome: R-HSA-73817 GYO_2718 cf3ec4ad89fcc85b3d6f0c42727c362b 557 SUPERFAMILY SSF52540 13 259 2.33E-47 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase GYO_2718 cf3ec4ad89fcc85b3d6f0c42727c362b 557 SMART SM00490 386 466 6.1E-22 T 14-10-2018 IPR001650 Helicase, C-terminal GYO_2718 cf3ec4ad89fcc85b3d6f0c42727c362b 557 Pfam PF00271 Helicase conserved C-terminal domain 360 466 1.1E-21 T 14-10-2018 IPR001650 Helicase, C-terminal GYO_2718 cf3ec4ad89fcc85b3d6f0c42727c362b 557 Gene3D G3DSA:3.40.50.10810 62 261 3.9E-43 T 14-10-2018 IPR038718 SNF2-like, N-terminal domain superfamily GYO_2718 cf3ec4ad89fcc85b3d6f0c42727c362b 557 Gene3D G3DSA:3.40.50.300 271 551 1.0E-52 T 14-10-2018 GYO_2718 cf3ec4ad89fcc85b3d6f0c42727c362b 557 SUPERFAMILY SSF52540 168 519 2.71E-55 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase GYO_2718 cf3ec4ad89fcc85b3d6f0c42727c362b 557 Pfam PF00176 SNF2 family N-terminal domain 79 296 2.0E-35 T 14-10-2018 IPR000330 SNF2-related, N-terminal domain GO:0005524 GYO_2718 cf3ec4ad89fcc85b3d6f0c42727c362b 557 SMART SM00487 56 236 8.9E-34 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain GYO_2354 ad3a12085bf5b10ae82bac38f4ba5985 404 TIGRFAM TIGR00791 gntP: transporter, gluconate:H+ symporter (GntP) family 1 403 5.4E-163 T 14-10-2018 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 GYO_2354 ad3a12085bf5b10ae82bac38f4ba5985 404 Pfam PF02447 GntP family permease 1 403 3.2E-152 T 14-10-2018 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 GYO_2354 ad3a12085bf5b10ae82bac38f4ba5985 404 PIRSF PIRSF002746 1 404 2.5E-157 T 14-10-2018 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 GYO_3405 2ea3c02fe4b09dba1f4eadc0741c2b17 689 SMART SM01007 20 219 4.3E-38 T 14-10-2018 IPR001303 Class II aldolase/adducin N-terminal GYO_3405 2ea3c02fe4b09dba1f4eadc0741c2b17 689 TIGRFAM TIGR02632 RhaD_aldol-ADH: rhamnulose-1-phosphate aldolase/alcohol dehydrogenase 19 689 8.2E-304 T 14-10-2018 IPR013454 Bifunctional rhamnulose-1-phosphate aldolase/alcohol dehydrogenase GYO_3405 2ea3c02fe4b09dba1f4eadc0741c2b17 689 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 600 617 4.8E-22 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR GYO_3405 2ea3c02fe4b09dba1f4eadc0741c2b17 689 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 505 516 4.8E-22 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR GYO_3405 2ea3c02fe4b09dba1f4eadc0741c2b17 689 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 553 569 4.8E-22 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR GYO_3405 2ea3c02fe4b09dba1f4eadc0741c2b17 689 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 579 598 4.8E-22 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR GYO_3405 2ea3c02fe4b09dba1f4eadc0741c2b17 689 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 429 446 4.8E-22 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR GYO_3405 2ea3c02fe4b09dba1f4eadc0741c2b17 689 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 647 667 4.8E-22 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR GYO_3405 2ea3c02fe4b09dba1f4eadc0741c2b17 689 Gene3D G3DSA:3.40.225.10 17 224 2.6E-65 T 14-10-2018 IPR036409 Class II aldolase/adducin N-terminal domain superfamily GYO_3405 2ea3c02fe4b09dba1f4eadc0741c2b17 689 SUPERFAMILY SSF53639 18 246 1.67E-37 T 14-10-2018 IPR036409 Class II aldolase/adducin N-terminal domain superfamily GYO_3405 2ea3c02fe4b09dba1f4eadc0741c2b17 689 Pfam PF00596 Class II Aldolase and Adducin N-terminal domain 20 218 8.4E-26 T 14-10-2018 IPR001303 Class II aldolase/adducin N-terminal GYO_3405 2ea3c02fe4b09dba1f4eadc0741c2b17 689 Gene3D G3DSA:3.40.50.720 415 686 5.2E-65 T 14-10-2018 GYO_3405 2ea3c02fe4b09dba1f4eadc0741c2b17 689 SUPERFAMILY SSF51735 428 683 2.21E-63 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily GYO_3405 2ea3c02fe4b09dba1f4eadc0741c2b17 689 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 435 683 6.0E-45 T 14-10-2018 GYO_1469 915779cc8a96c3fe0b2c280670a78465 614 Pfam PF02080 TrkA-C domain 552 610 8.8E-9 T 14-10-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 GYO_1469 915779cc8a96c3fe0b2c280670a78465 614 Pfam PF00999 Sodium/hydrogen exchanger family 10 388 6.4E-78 T 14-10-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 GYO_1469 915779cc8a96c3fe0b2c280670a78465 614 Gene3D G3DSA:3.40.50.720 401 533 3.4E-15 T 14-10-2018 GYO_1469 915779cc8a96c3fe0b2c280670a78465 614 SUPERFAMILY SSF116726 552 611 4.97E-9 T 14-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 GYO_1469 915779cc8a96c3fe0b2c280670a78465 614 Gene3D G3DSA:1.20.1530.20 2 400 1.1E-71 T 14-10-2018 IPR038770 Sodium/solute symporter superfamily GYO_1469 915779cc8a96c3fe0b2c280670a78465 614 Pfam PF02254 TrkA-N domain 406 514 4.6E-10 T 14-10-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 GYO_1469 915779cc8a96c3fe0b2c280670a78465 614 SUPERFAMILY SSF51735 404 516 6.38E-15 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily GYO_1469 915779cc8a96c3fe0b2c280670a78465 614 Gene3D G3DSA:3.30.70.1450 534 614 4.2E-18 T 14-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 GYO_3110 41175a4e1166e778307d2d0306b963e5 804 Gene3D G3DSA:3.30.56.10 410 483 2.9E-24 T 14-10-2018 GYO_3110 41175a4e1166e778307d2d0306b963e5 804 Gene3D G3DSA:3.30.70.380 711 803 1.4E-31 T 14-10-2018 IPR036690 Ferrodoxin-fold anticodon-binding domain superfamily KEGG: 00970+6.1.1.20 GYO_3110 41175a4e1166e778307d2d0306b963e5 804 Pfam PF01588 Putative tRNA binding domain 46 152 3.8E-26 T 14-10-2018 IPR002547 tRNA-binding domain GO:0000049 Reactome: R-HSA-379716 GYO_3110 41175a4e1166e778307d2d0306b963e5 804 Pfam PF03147 Ferredoxin-fold anticodon binding domain 710 803 1.1E-29 T 14-10-2018 IPR005121 Ferrodoxin-fold anticodon-binding domain KEGG: 00970+6.1.1.20 GYO_3110 41175a4e1166e778307d2d0306b963e5 804 SUPERFAMILY SSF50249 36 199 1.1E-45 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold GYO_3110 41175a4e1166e778307d2d0306b963e5 804 Pfam PF03483 B3/4 domain 222 394 6.7E-64 T 14-10-2018 IPR005146 B3/B4 tRNA-binding domain GO:0003723|GO:0004826 KEGG: 00970+6.1.1.20 GYO_3110 41175a4e1166e778307d2d0306b963e5 804 Gene3D G3DSA:3.30.56.10 4 189 6.2E-68 T 14-10-2018 GYO_3110 41175a4e1166e778307d2d0306b963e5 804 TIGRFAM TIGR00472 pheT_bact: phenylalanine--tRNA ligase, beta subunit 1 803 2.7E-268 T 14-10-2018 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit GO:0000287|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 GYO_3110 41175a4e1166e778307d2d0306b963e5 804 SUPERFAMILY SSF54991 705 803 9.15E-32 T 14-10-2018 IPR036690 Ferrodoxin-fold anticodon-binding domain superfamily KEGG: 00970+6.1.1.20 GYO_3110 41175a4e1166e778307d2d0306b963e5 804 SUPERFAMILY SSF56037 209 404 3.66E-70 T 14-10-2018 GYO_3110 41175a4e1166e778307d2d0306b963e5 804 Hamap MF_00283 Phenylalanine--tRNA ligase beta subunit [pheT]. 1 797 45.753 T 14-10-2018 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit GO:0000287|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 GYO_3110 41175a4e1166e778307d2d0306b963e5 804 Gene3D G3DSA:2.40.50.140 40 161 6.2E-68 T 14-10-2018 GYO_3110 41175a4e1166e778307d2d0306b963e5 804 SMART SM00873 221 394 1.8E-87 T 14-10-2018 IPR005146 B3/B4 tRNA-binding domain GO:0003723|GO:0004826 KEGG: 00970+6.1.1.20 GYO_3110 41175a4e1166e778307d2d0306b963e5 804 Gene3D G3DSA:3.30.930.10 495 698 5.5E-62 T 14-10-2018 GYO_3110 41175a4e1166e778307d2d0306b963e5 804 SMART SM00896 710 803 2.7E-45 T 14-10-2018 IPR005121 Ferrodoxin-fold anticodon-binding domain KEGG: 00970+6.1.1.20 GYO_3110 41175a4e1166e778307d2d0306b963e5 804 SMART SM00874 411 479 1.3E-26 T 14-10-2018 IPR005147 tRNA synthetase, B5-domain GO:0000287|GO:0003723|GO:0005524|GO:0006432 KEGG: 00970+6.1.1.20|Reactome: R-HSA-379716 GYO_3110 41175a4e1166e778307d2d0306b963e5 804 SUPERFAMILY SSF55681 475 697 4.97E-52 T 14-10-2018 GYO_3110 41175a4e1166e778307d2d0306b963e5 804 Gene3D G3DSA:3.50.40.10 204 405 1.1E-80 T 14-10-2018 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 KEGG: 00970+6.1.1.20 GYO_3110 41175a4e1166e778307d2d0306b963e5 804 Pfam PF03484 tRNA synthetase B5 domain 414 479 8.2E-20 T 14-10-2018 IPR005147 tRNA synthetase, B5-domain GO:0000287|GO:0003723|GO:0005524|GO:0006432 KEGG: 00970+6.1.1.20|Reactome: R-HSA-379716 GYO_3110 41175a4e1166e778307d2d0306b963e5 804 SUPERFAMILY SSF46955 413 483 2.56E-19 T 14-10-2018 IPR009061 Putative DNA-binding domain superfamily GYO_3246 b6a7c1bd694cb7a8498dd55736478270 463 Gene3D G3DSA:3.30.70.360 204 291 4.6E-170 T 14-10-2018 GYO_3246 b6a7c1bd694cb7a8498dd55736478270 463 Gene3D G3DSA:3.40.630.10 13 461 4.6E-170 T 14-10-2018 GYO_3246 b6a7c1bd694cb7a8498dd55736478270 463 SUPERFAMILY SSF53187 11 462 8.2E-66 T 14-10-2018 GYO_3246 b6a7c1bd694cb7a8498dd55736478270 463 SUPERFAMILY SSF55031 184 366 5.7E-51 T 14-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain GYO_3246 b6a7c1bd694cb7a8498dd55736478270 463 Pfam PF01546 Peptidase family M20/M25/M40 84 459 3.3E-34 T 14-10-2018 IPR002933 Peptidase M20 GO:0016787 GYO_3246 b6a7c1bd694cb7a8498dd55736478270 463 Gene3D G3DSA:3.30.70.360 184 377 4.6E-170 T 14-10-2018 GYO_3246 b6a7c1bd694cb7a8498dd55736478270 463 ProSitePatterns PS00759 ArgE / dapE / ACY1 / CPG2 / yscS family signature 2. 114 152 - T 14-10-2018 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 GYO_3246 b6a7c1bd694cb7a8498dd55736478270 463 TIGRFAM TIGR01887 dipeptidaselike: putative dipeptidase 11 458 5.0E-170 T 14-10-2018 IPR010964 Peptidase M20A, peptidase V-related GO:0008270|GO:0016805 GYO_3203 1763994d0d123ce8d3145c498707a126 69 ProSitePatterns PS00304 Small, acid-soluble spore proteins, alpha/beta type, signature 1. 25 34 - T 14-10-2018 IPR018126 Small acid-soluble spore protein, alpha/beta-type, conserved site GO:0003690|GO:0006265 GYO_3203 1763994d0d123ce8d3145c498707a126 69 ProSitePatterns PS00684 Small, acid-soluble spore proteins, alpha/beta type, signature 2. 43 57 - T 14-10-2018 IPR018126 Small acid-soluble spore protein, alpha/beta-type, conserved site GO:0003690|GO:0006265 GYO_3203 1763994d0d123ce8d3145c498707a126 69 Pfam PF00269 Small, acid-soluble spore proteins, alpha/beta type 10 64 3.4E-21 T 14-10-2018 IPR001448 Small acid-soluble spore protein, alpha/beta-type GO:0003690|GO:0006265 GYO_3203 1763994d0d123ce8d3145c498707a126 69 Gene3D G3DSA:1.10.8.910 10 69 1.1E-29 T 14-10-2018 IPR038300 SASP, alpha/beta-type superfamily GYO_0002 24454024caef3c9614bd3d53be4c77ef 378 Pfam PF00712 DNA polymerase III beta subunit, N-terminal domain 1 127 2.8E-42 T 14-10-2018 IPR022634 DNA polymerase III, beta sliding clamp, N-terminal GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 GYO_0002 24454024caef3c9614bd3d53be4c77ef 378 SUPERFAMILY SSF55979 134 251 1.53E-27 T 14-10-2018 GYO_0002 24454024caef3c9614bd3d53be4c77ef 378 SUPERFAMILY SSF55979 254 377 2.95E-30 T 14-10-2018 GYO_0002 24454024caef3c9614bd3d53be4c77ef 378 TIGRFAM TIGR00663 dnan: DNA polymerase III, beta subunit 1 377 1.3E-139 T 14-10-2018 IPR001001 DNA polymerase III, beta sliding clamp GO:0003677|GO:0006260|GO:0009360 GYO_0002 24454024caef3c9614bd3d53be4c77ef 378 Pfam PF02767 DNA polymerase III beta subunit, central domain 136 251 1.5E-41 T 14-10-2018 IPR022637 DNA polymerase III, beta sliding clamp, central GO:0003887|GO:0006260|GO:0008408|GO:0009360 GYO_0002 24454024caef3c9614bd3d53be4c77ef 378 Gene3D G3DSA:3.70.10.10 145 375 3.6E-144 T 14-10-2018 GYO_0002 24454024caef3c9614bd3d53be4c77ef 378 Gene3D G3DSA:3.10.150.10 1 250 3.6E-144 T 14-10-2018 GYO_0002 24454024caef3c9614bd3d53be4c77ef 378 PIRSF PIRSF000804 1 378 2.0E-116 T 14-10-2018 IPR001001 DNA polymerase III, beta sliding clamp GO:0003677|GO:0006260|GO:0009360 GYO_0002 24454024caef3c9614bd3d53be4c77ef 378 SUPERFAMILY SSF55979 1 127 1.47E-23 T 14-10-2018 GYO_0002 24454024caef3c9614bd3d53be4c77ef 378 SMART SM00480 17 373 4.0E-185 T 14-10-2018 IPR001001 DNA polymerase III, beta sliding clamp GO:0003677|GO:0006260|GO:0009360 GYO_0002 24454024caef3c9614bd3d53be4c77ef 378 Pfam PF02768 DNA polymerase III beta subunit, C-terminal domain 254 376 1.3E-39 T 14-10-2018 IPR022635 DNA polymerase III, beta sliding clamp, C-terminal GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 GYO_1180 1ba4e67b0e0db3dfd41197c8c198fab2 303 Pfam PF12671 Putative amidase domain 140 292 3.2E-39 T 14-10-2018 IPR024301 Putative amidase domain GYO_0528 4a4c981eeb4938c0bc3726e7dacd0fb5 476 ProSitePatterns PS00457 Sodium:solute symporter family signature 2. 401 421 - T 14-10-2018 IPR018212 Sodium/solute symporter, conserved site GYO_0528 4a4c981eeb4938c0bc3726e7dacd0fb5 476 TIGRFAM TIGR00813 sss: transporter, solute:sodium symporter (SSS) family 21 419 1.7E-101 T 14-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 GYO_0528 4a4c981eeb4938c0bc3726e7dacd0fb5 476 TIGRFAM TIGR02121 Na_Pro_sym: sodium/proline symporter 2 473 1.4E-219 T 14-10-2018 IPR011851 Sodium/proline symporter GO:0005298|GO:0006814|GO:0015824|GO:0016021|GO:0031402 GYO_0528 4a4c981eeb4938c0bc3726e7dacd0fb5 476 Gene3D G3DSA:1.20.1730.10 10 475 3.4E-101 T 14-10-2018 IPR038377 Sodium/glucose symporter superfamily GYO_0528 4a4c981eeb4938c0bc3726e7dacd0fb5 476 Pfam PF00474 Sodium:solute symporter family 21 419 2.2E-111 T 14-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 GYO_0528 4a4c981eeb4938c0bc3726e7dacd0fb5 476 ProSitePatterns PS00456 Sodium:solute symporter family signature 1. 143 168 - T 14-10-2018 IPR018212 Sodium/solute symporter, conserved site GYO_3306 604ce973bf110627711372bff750b133 632 Pfam PF00733 Asparagine synthase 240 610 2.6E-113 T 14-10-2018 IPR001962 Asparagine synthase GO:0004066|GO:0006529 GYO_3306 604ce973bf110627711372bff750b133 632 SUPERFAMILY SSF52402 228 605 1.48E-86 T 14-10-2018 GYO_3306 604ce973bf110627711372bff750b133 632 Gene3D G3DSA:3.60.20.10 3 189 1.1E-63 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal GYO_3306 604ce973bf110627711372bff750b133 632 Pfam PF13537 Glutamine amidotransferase domain 51 168 6.7E-45 T 14-10-2018 IPR017932 Glutamine amidotransferase type 2 domain GYO_3306 604ce973bf110627711372bff750b133 632 SUPERFAMILY SSF56235 1 223 2.83E-60 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal GYO_3306 604ce973bf110627711372bff750b133 632 PIRSF PIRSF001589 1 628 2.2E-197 T 14-10-2018 IPR006426 Asparagine synthase, glutamine-hydrolyzing GO:0004066|GO:0006529 KEGG: 00250+6.3.5.4|Reactome: R-HSA-380994|Reactome: R-HSA-70614 GYO_3306 604ce973bf110627711372bff750b133 632 TIGRFAM TIGR01536 asn_synth_AEB: asparagine synthase (glutamine-hydrolyzing) 2 547 6.1E-186 T 14-10-2018 IPR006426 Asparagine synthase, glutamine-hydrolyzing GO:0004066|GO:0006529 KEGG: 00250+6.3.5.4|Reactome: R-HSA-380994|Reactome: R-HSA-70614 GYO_0672 dc853a34f02ef7cf994334b894afe2fb 381 Gene3D G3DSA:2.40.110.10 134 224 5.7E-21 T 14-10-2018 GYO_0672 dc853a34f02ef7cf994334b894afe2fb 381 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 8 95 2.5E-12 T 14-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 GYO_0672 dc853a34f02ef7cf994334b894afe2fb 381 Gene3D G3DSA:1.20.140.10 238 378 7.5E-30 T 14-10-2018 GYO_0672 dc853a34f02ef7cf994334b894afe2fb 381 PIRSF PIRSF016578 1 380 1.1E-38 T 14-10-2018 GYO_0672 dc853a34f02ef7cf994334b894afe2fb 381 SUPERFAMILY SSF47203 236 375 5.48E-25 T 14-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 GYO_0672 dc853a34f02ef7cf994334b894afe2fb 381 SUPERFAMILY SSF56645 20 224 8.77E-41 T 14-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 GYO_0672 dc853a34f02ef7cf994334b894afe2fb 381 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 124 216 1.9E-13 T 14-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 GYO_0672 dc853a34f02ef7cf994334b894afe2fb 381 Pfam PF08028 Acyl-CoA dehydrogenase, C-terminal domain 243 360 7.0E-17 T 14-10-2018 IPR013107 Acyl-CoA dehydrogenase, C-terminal domain GYO_0672 dc853a34f02ef7cf994334b894afe2fb 381 Gene3D G3DSA:1.10.540.10 5 121 2.4E-24 T 14-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 GYO_1333 e932af91ba58dff205e077a08b27e5f5 330 Gene3D G3DSA:3.90.180.10 20 329 4.1E-118 T 14-10-2018 GYO_1333 e932af91ba58dff205e077a08b27e5f5 330 TIGRFAM TIGR02823 oxido_YhdH: putative quinone oxidoreductase, YhdH/YhfP family 6 330 9.3E-138 T 14-10-2018 IPR014188 Acrylyl-CoA reductase AcuI GYO_1333 e932af91ba58dff205e077a08b27e5f5 330 SUPERFAMILY SSF50129 5 148 8.67E-38 T 14-10-2018 IPR011032 GroES-like superfamily GYO_1333 e932af91ba58dff205e077a08b27e5f5 330 Pfam PF00107 Zinc-binding dehydrogenase 162 275 1.7E-16 T 14-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 GYO_1333 e932af91ba58dff205e077a08b27e5f5 330 SMART SM00829 16 328 1.1E-6 T 14-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 GYO_1333 e932af91ba58dff205e077a08b27e5f5 330 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 32 89 8.9E-5 T 14-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 GYO_1333 e932af91ba58dff205e077a08b27e5f5 330 SUPERFAMILY SSF51735 120 291 3.82E-38 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily GYO_1333 e932af91ba58dff205e077a08b27e5f5 330 Gene3D G3DSA:3.40.50.720 129 297 4.1E-118 T 14-10-2018 GYO_2410 e477ea13ee9cfcc06925c9fb3a86ed08 558 SUPERFAMILY SSF143975 3 376 3.92E-141 T 14-10-2018 IPR037237 IlvD/EDD, N-terminal domain KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 GYO_2410 e477ea13ee9cfcc06925c9fb3a86ed08 558 ProSitePatterns PS00886 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 1. 122 132 - T 14-10-2018 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 GYO_2410 e477ea13ee9cfcc06925c9fb3a86ed08 558 SUPERFAMILY SSF52016 377 556 1.65E-63 T 14-10-2018 GYO_2410 e477ea13ee9cfcc06925c9fb3a86ed08 558 Pfam PF00920 Dehydratase family 34 553 2.1E-229 T 14-10-2018 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 GYO_2410 e477ea13ee9cfcc06925c9fb3a86ed08 558 Gene3D G3DSA:3.50.30.80 377 528 5.0E-55 T 14-10-2018 GYO_2410 e477ea13ee9cfcc06925c9fb3a86ed08 558 Hamap MF_00012 Dihydroxy-acid dehydratase [ilvD]. 4 557 48.078 T 14-10-2018 IPR004404 Dihydroxy-acid dehydratase GO:0004160|GO:0009082 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 GYO_2410 e477ea13ee9cfcc06925c9fb3a86ed08 558 TIGRFAM TIGR00110 ilvD: dihydroxy-acid dehydratase 17 557 9.2E-273 T 14-10-2018 IPR004404 Dihydroxy-acid dehydratase GO:0004160|GO:0009082 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 GYO_2410 e477ea13ee9cfcc06925c9fb3a86ed08 558 ProSitePatterns PS00887 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 2. 465 476 - T 14-10-2018 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 GYO_2179 7ab0ed3ace99e6df9936ac912ca862ce 688 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 586 634 1.0E-8 T 14-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 GYO_2179 7ab0ed3ace99e6df9936ac912ca862ce 688 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 389 401 5.8 T 14-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 GYO_2179 7ab0ed3ace99e6df9936ac912ca862ce 688 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 538 578 9.7E-10 T 14-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 GYO_2179 7ab0ed3ace99e6df9936ac912ca862ce 688 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 488 533 2.3E-8 T 14-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 GYO_2179 7ab0ed3ace99e6df9936ac912ca862ce 688 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 431 480 6.3E-6 T 14-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 GYO_2179 7ab0ed3ace99e6df9936ac912ca862ce 688 SMART SM00434 1 345 2.7E-145 T 14-10-2018 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 GYO_2179 7ab0ed3ace99e6df9936ac912ca862ce 688 SUPERFAMILY SSF101904 381 685 2.35E-96 T 14-10-2018 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal GYO_2179 7ab0ed3ace99e6df9936ac912ca862ce 688 Gene3D G3DSA:3.30.1360.40 117 213 5.0E-142 T 14-10-2018 GYO_2179 7ab0ed3ace99e6df9936ac912ca862ce 688 Gene3D G3DSA:3.90.199.10 1 365 5.0E-142 T 14-10-2018 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 Reactome: R-HSA-4615885 GYO_2179 7ab0ed3ace99e6df9936ac912ca862ce 688 SUPERFAMILY SSF56719 1 367 4.05E-119 T 14-10-2018 IPR013760 DNA topoisomerase, type IIA-like domain superfamily GO:0003918|GO:0005524 Reactome: R-HSA-4615885 GYO_2179 7ab0ed3ace99e6df9936ac912ca862ce 688 Gene3D G3DSA:2.120.10.90 381 688 5.0E-106 T 14-10-2018 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal GYO_2179 7ab0ed3ace99e6df9936ac912ca862ce 688 Pfam PF00521 DNA gyrase/topoisomerase IV, subunit A 1 350 1.1E-102 T 14-10-2018 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 GYO_2179 7ab0ed3ace99e6df9936ac912ca862ce 688 Gene3D G3DSA:1.10.268.10 250 339 5.0E-142 T 14-10-2018 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain superfamily GO:0003677|GO:0003918|GO:0005524 Reactome: R-HSA-4615885 GYO_2179 7ab0ed3ace99e6df9936ac912ca862ce 688 TIGRFAM TIGR01061 parC_Gpos: DNA topoisomerase IV, A subunit 1 626 0.0 T 14-10-2018 IPR005741 DNA topoisomerase IV subunit A, Gram-positive GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 GYO_4077 93be6a8f8fc3e47d691c1f4edf3de8b8 356 Pfam PF03462 PCRF domain 8 202 2.4E-74 T 14-10-2018 IPR005139 Peptide chain release factor GO:0006415 GYO_4077 93be6a8f8fc3e47d691c1f4edf3de8b8 356 Gene3D G3DSA:3.30.160.20 209 295 4.5E-95 T 14-10-2018 GYO_4077 93be6a8f8fc3e47d691c1f4edf3de8b8 356 Pfam PF00472 RF-1 domain 210 319 1.0E-40 T 14-10-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 GYO_4077 93be6a8f8fc3e47d691c1f4edf3de8b8 356 Gene3D G3DSA:1.20.58.410 2 100 1.4E-9 T 14-10-2018 GYO_4077 93be6a8f8fc3e47d691c1f4edf3de8b8 356 ProSitePatterns PS00745 Prokaryotic-type class I peptide chain release factors signature. 226 242 - T 14-10-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 GYO_4077 93be6a8f8fc3e47d691c1f4edf3de8b8 356 TIGRFAM TIGR00019 prfA: peptide chain release factor 1 2 353 3.4E-174 T 14-10-2018 IPR004373 Peptide chain release factor 1 GO:0005737|GO:0006415|GO:0016149 GYO_4077 93be6a8f8fc3e47d691c1f4edf3de8b8 356 SUPERFAMILY SSF75620 8 351 8.5E-134 T 14-10-2018 GYO_4077 93be6a8f8fc3e47d691c1f4edf3de8b8 356 Hamap MF_00093 Peptide chain release factor 1 [prfA]. 1 355 40.418 T 14-10-2018 IPR004373 Peptide chain release factor 1 GO:0005737|GO:0006415|GO:0016149 GYO_4077 93be6a8f8fc3e47d691c1f4edf3de8b8 356 Gene3D G3DSA:3.30.70.1660 110 340 4.5E-95 T 14-10-2018 GYO_4077 93be6a8f8fc3e47d691c1f4edf3de8b8 356 SMART SM00937 63 177 8.0E-63 T 14-10-2018 IPR005139 Peptide chain release factor GO:0006415 GYO_4030 e5273eb43e258a720d3d2d4060a381be 124 TIGRFAM TIGR00192 urease_beta: urease, beta subunit 1 103 1.0E-52 T 14-10-2018 IPR002019 Urease, beta subunit KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 GYO_4030 e5273eb43e258a720d3d2d4060a381be 124 SUPERFAMILY SSF51278 1 119 1.83E-46 T 14-10-2018 IPR036461 Urease, beta subunit superfamily KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 GYO_4030 e5273eb43e258a720d3d2d4060a381be 124 Pfam PF00699 Urease beta subunit 3 98 4.1E-41 T 14-10-2018 IPR002019 Urease, beta subunit KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 GYO_4030 e5273eb43e258a720d3d2d4060a381be 124 Gene3D G3DSA:2.10.150.10 1 123 1.8E-48 T 14-10-2018 IPR036461 Urease, beta subunit superfamily KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 GYO_4030 e5273eb43e258a720d3d2d4060a381be 124 Hamap MF_01954 Urease subunit beta [ureB]. 1 101 29.517 T 14-10-2018 IPR002019 Urease, beta subunit KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 GYO_0710 4580053e4da99770dfbafd9c90d4c32e 375 SUPERFAMILY SSF53474 60 373 6.67E-44 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold GYO_0710 4580053e4da99770dfbafd9c90d4c32e 375 Gene3D G3DSA:3.40.50.1820 72 356 1.3E-112 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold GYO_0710 4580053e4da99770dfbafd9c90d4c32e 375 Gene3D G3DSA:1.10.10.800 207 301 1.3E-112 T 14-10-2018 GYO_0710 4580053e4da99770dfbafd9c90d4c32e 375 Pfam PF01738 Dienelactone hydrolase family 93 211 1.7E-8 T 14-10-2018 IPR002925 Dienelactone hydrolase GO:0016787 GYO_3470 614643ddfdfb8904718743c40530068d 73 Pfam PF10676 Spore germination protein gerPA/gerPF 1 72 1.8E-26 T 14-10-2018 IPR019618 Spore germination protein GerPA/GerPF GYO_3442 d1cd338a96a3a835a15dca88059c292a 235 SMART SM00448 2 115 1.8E-31 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 GYO_3442 d1cd338a96a3a835a15dca88059c292a 235 PIRSF PIRSF006171 1 227 5.2E-87 T 14-10-2018 IPR024187 Signal transduction response regulator, citrate/malate metabolism GO:0000160|GO:0003700 GYO_3442 d1cd338a96a3a835a15dca88059c292a 235 Gene3D G3DSA:3.40.50.12740 2 206 1.6E-32 T 14-10-2018 GYO_3442 d1cd338a96a3a835a15dca88059c292a 235 Pfam PF00072 Response regulator receiver domain 4 115 5.1E-27 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 GYO_3442 d1cd338a96a3a835a15dca88059c292a 235 SUPERFAMILY SSF52172 1 179 1.71E-36 T 14-10-2018 IPR011006 CheY-like superfamily GYO_2005 c964c9ffb06eef71f27578e59e2039c5 293 SUPERFAMILY SSF46934 3 54 9.53E-21 T 14-10-2018 IPR009060 UBA-like superfamily GO:0005515 GYO_2005 c964c9ffb06eef71f27578e59e2039c5 293 Gene3D G3DSA:3.30.479.20 155 273 3.1E-44 T 14-10-2018 IPR036402 Elongation factor Ts, dimerisation domain superfamily Reactome: R-HSA-5389840 GYO_2005 c964c9ffb06eef71f27578e59e2039c5 293 Hamap MF_00050 Elongation factor Ts [tsf]. 1 291 82.652 T 14-10-2018 IPR001816 Translation elongation factor EFTs/EF1B GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 GYO_2005 c964c9ffb06eef71f27578e59e2039c5 293 Gene3D G3DSA:1.10.286.20 193 239 3.1E-44 T 14-10-2018 GYO_2005 c964c9ffb06eef71f27578e59e2039c5 293 ProSitePatterns PS01126 Elongation factor Ts signature 1. 11 26 - T 14-10-2018 IPR018101 Translation elongation factor Ts, conserved site GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 GYO_2005 c964c9ffb06eef71f27578e59e2039c5 293 TIGRFAM TIGR00116 tsf: translation elongation factor Ts 1 293 1.2E-130 T 14-10-2018 IPR001816 Translation elongation factor EFTs/EF1B GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 GYO_2005 c964c9ffb06eef71f27578e59e2039c5 293 Gene3D G3DSA:1.10.8.10 1 55 6.7E-28 T 14-10-2018 GYO_2005 c964c9ffb06eef71f27578e59e2039c5 293 SUPERFAMILY SSF54713 55 144 6.54E-23 T 14-10-2018 IPR036402 Elongation factor Ts, dimerisation domain superfamily Reactome: R-HSA-5389840 GYO_2005 c964c9ffb06eef71f27578e59e2039c5 293 Gene3D G3DSA:3.30.479.20 56 147 3.5E-26 T 14-10-2018 IPR036402 Elongation factor Ts, dimerisation domain superfamily Reactome: R-HSA-5389840 GYO_2005 c964c9ffb06eef71f27578e59e2039c5 293 ProSitePatterns PS01127 Elongation factor Ts signature 2. 74 84 - T 14-10-2018 IPR018101 Translation elongation factor Ts, conserved site GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 GYO_2005 c964c9ffb06eef71f27578e59e2039c5 293 SUPERFAMILY SSF54713 152 292 1.7E-52 T 14-10-2018 IPR036402 Elongation factor Ts, dimerisation domain superfamily Reactome: R-HSA-5389840 GYO_2005 c964c9ffb06eef71f27578e59e2039c5 293 Pfam PF00889 Elongation factor TS 70 274 3.2E-76 T 14-10-2018 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0006414 Reactome: R-HSA-5389840 GYO_4515 8ec70ad7d3d98b786b6e124b39ca5cb7 239 Hamap MF_00074 Ribosomal RNA small subunit methyltransferase G [rsmG]. 14 214 28.195 T 14-10-2018 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 GYO_4515 8ec70ad7d3d98b786b6e124b39ca5cb7 239 Pfam PF02527 rRNA small subunit methyltransferase G 21 204 3.9E-63 T 14-10-2018 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 GYO_4515 8ec70ad7d3d98b786b6e124b39ca5cb7 239 TIGRFAM TIGR00138 rsmG_gidB: 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG 25 216 1.6E-50 T 14-10-2018 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 GYO_4515 8ec70ad7d3d98b786b6e124b39ca5cb7 239 Gene3D G3DSA:3.40.50.150 1 239 2.7E-90 T 14-10-2018 GYO_4515 8ec70ad7d3d98b786b6e124b39ca5cb7 239 SUPERFAMILY SSF53335 1 237 6.55E-49 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase GYO_4515 8ec70ad7d3d98b786b6e124b39ca5cb7 239 PIRSF PIRSF003078 1 220 2.1E-56 T 14-10-2018 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 GYO_0618 844f6f27b60a02e9608a830ff646373c 352 ProSitePatterns PS00470 Isocitrate and isopropylmalate dehydrogenases signature. 239 258 - T 14-10-2018 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-71403 GYO_0618 844f6f27b60a02e9608a830ff646373c 352 SMART SM01329 5 345 2.6E-162 T 14-10-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 GYO_0618 844f6f27b60a02e9608a830ff646373c 352 Gene3D G3DSA:3.40.718.10 1 352 4.2E-125 T 14-10-2018 GYO_0618 844f6f27b60a02e9608a830ff646373c 352 SUPERFAMILY SSF53659 2 349 4.03E-112 T 14-10-2018 GYO_0618 844f6f27b60a02e9608a830ff646373c 352 TIGRFAM TIGR02089 TTC: tartrate dehydrogenase 1 349 1.2E-195 T 14-10-2018 IPR011829 Tartrate dehydrogenase GO:0016616|GO:0051287|GO:0055114 KEGG: 00630+1.1.1.93|KEGG: 00650+1.1.1.83 GYO_0618 844f6f27b60a02e9608a830ff646373c 352 Pfam PF00180 Isocitrate/isopropylmalate dehydrogenase 6 345 2.4E-85 T 14-10-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 GYO_4408 ecd54527efef86d2f2e61fa8ef4b15bd 243 SMART SM00895 90 219 3.0E-6 T 14-10-2018 IPR011711 GntR, C-terminal GYO_4408 ecd54527efef86d2f2e61fa8ef4b15bd 243 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 55 71 1.3E-5 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 GYO_4408 ecd54527efef86d2f2e61fa8ef4b15bd 243 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 41 55 1.3E-5 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 GYO_4408 ecd54527efef86d2f2e61fa8ef4b15bd 243 SUPERFAMILY SSF46785 14 84 1.54E-12 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily GYO_4408 ecd54527efef86d2f2e61fa8ef4b15bd 243 SUPERFAMILY SSF48008 86 226 1.46E-19 T 14-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal GYO_4408 ecd54527efef86d2f2e61fa8ef4b15bd 243 Gene3D G3DSA:1.20.120.530 84 224 4.5E-16 T 14-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal GYO_4408 ecd54527efef86d2f2e61fa8ef4b15bd 243 SMART SM00345 23 81 1.8E-16 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 GYO_4408 ecd54527efef86d2f2e61fa8ef4b15bd 243 Pfam PF07729 FCD domain 90 213 2.3E-15 T 14-10-2018 IPR011711 GntR, C-terminal GYO_4408 ecd54527efef86d2f2e61fa8ef4b15bd 243 Gene3D G3DSA:1.10.10.10 20 81 1.3E-14 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily GYO_4408 ecd54527efef86d2f2e61fa8ef4b15bd 243 Pfam PF00392 Bacterial regulatory proteins, gntR family 22 80 2.3E-15 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 GYO_0135 e736f3b9102f0efbb6524e1ab9c907d3 1199 Pfam PF04983 RNA polymerase Rpb1, domain 3 478 663 1.4E-36 T 14-10-2018 IPR007066 RNA polymerase Rpb1, domain 3 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 GYO_0135 e736f3b9102f0efbb6524e1ab9c907d3 1199 Gene3D G3DSA:2.40.50.100 966 1029 7.5E-67 T 14-10-2018 GYO_0135 e736f3b9102f0efbb6524e1ab9c907d3 1199 Pfam PF00623 RNA polymerase Rpb1, domain 2 333 386 5.5E-9 T 14-10-2018 IPR000722 RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 GYO_0135 e736f3b9102f0efbb6524e1ab9c907d3 1199 Pfam PF00623 RNA polymerase Rpb1, domain 2 378 474 2.0E-29 T 14-10-2018 IPR000722 RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 GYO_0135 e736f3b9102f0efbb6524e1ab9c907d3 1199 Gene3D G3DSA:1.10.132.30 660 794 6.6E-60 T 14-10-2018 IPR038120 RNA polymerase Rpb1, funnel domain superfamily KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 GYO_0135 e736f3b9102f0efbb6524e1ab9c907d3 1199 Hamap MF_01322 DNA-directed RNA polymerase subunit beta' [rpoC]. 4 1195 18.751 T 14-10-2018 IPR012754 DNA-directed RNA polymerase, subunit beta-prime GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 GYO_0135 e736f3b9102f0efbb6524e1ab9c907d3 1199 Gene3D G3DSA:1.10.150.390 1130 1190 1.2E-28 T 14-10-2018 GYO_0135 e736f3b9102f0efbb6524e1ab9c907d3 1199 Gene3D G3DSA:1.10.274.100 479 659 4.1E-48 T 14-10-2018 GYO_0135 e736f3b9102f0efbb6524e1ab9c907d3 1199 Gene3D G3DSA:1.10.1790.20 950 1128 7.5E-67 T 14-10-2018 GYO_0135 e736f3b9102f0efbb6524e1ab9c907d3 1199 Pfam PF04998 RNA polymerase Rpb1, domain 5 770 1129 1.0E-66 T 14-10-2018 IPR007081 RNA polymerase Rpb1, domain 5 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 GYO_0135 e736f3b9102f0efbb6524e1ab9c907d3 1199 SUPERFAMILY SSF64484 5 1181 0.0 T 14-10-2018 GYO_0135 e736f3b9102f0efbb6524e1ab9c907d3 1199 Pfam PF04997 RNA polymerase Rpb1, domain 1 6 331 1.1E-89 T 14-10-2018 IPR007080 RNA polymerase Rpb1, domain 1 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 GYO_0135 e736f3b9102f0efbb6524e1ab9c907d3 1199 Gene3D G3DSA:1.10.40.90 363 405 1.3E-23 T 14-10-2018 GYO_0135 e736f3b9102f0efbb6524e1ab9c907d3 1199 TIGRFAM TIGR02386 rpoC_TIGR: DNA-directed RNA polymerase, beta' subunit 10 1181 0.0 T 14-10-2018 IPR012754 DNA-directed RNA polymerase, subunit beta-prime GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 GYO_0135 e736f3b9102f0efbb6524e1ab9c907d3 1199 Pfam PF05000 RNA polymerase Rpb1, domain 4 692 759 2.8E-14 T 14-10-2018 IPR007083 RNA polymerase Rpb1, domain 4 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 GYO_0135 e736f3b9102f0efbb6524e1ab9c907d3 1199 SMART SM00663 224 503 2.2E-185 T 14-10-2018 IPR006592 RNA polymerase, N-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 GYO_2755 ac1f31189e4513a35a6481a15120a8f3 187 TIGRFAM TIGR02727 MTHFS_bact: 5-formyltetrahydrofolate cyclo-ligase 2 179 1.1E-58 T 14-10-2018 IPR002698 5-formyltetrahydrofolate cyclo-ligase GYO_2755 ac1f31189e4513a35a6481a15120a8f3 187 Gene3D G3DSA:3.40.50.10420 1 187 2.2E-71 T 14-10-2018 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain superfamily GYO_2755 ac1f31189e4513a35a6481a15120a8f3 187 PIRSF PIRSF006806 1 182 2.0E-56 T 14-10-2018 IPR002698 5-formyltetrahydrofolate cyclo-ligase GYO_2755 ac1f31189e4513a35a6481a15120a8f3 187 Pfam PF01812 5-formyltetrahydrofolate cyclo-ligase family 2 179 1.1E-54 T 14-10-2018 IPR002698 5-formyltetrahydrofolate cyclo-ligase GYO_2755 ac1f31189e4513a35a6481a15120a8f3 187 SUPERFAMILY SSF100950 1 185 2.51E-52 T 14-10-2018 IPR037171 NagB/RpiA transferase-like GYO_0085 853114e7639c23e5d20f805c7dc90ab2 297 ProSitePatterns PS01096 PpiC-type peptidyl-prolyl cis-trans isomerase signature. 183 204 - T 14-10-2018 IPR023058 Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site Reactome: R-HSA-1169408|Reactome: R-HSA-6804756|Reactome: R-HSA-6811555|Reactome: R-HSA-936440 GYO_0085 853114e7639c23e5d20f805c7dc90ab2 297 Pfam PF13145 PPIC-type PPIASE domain 135 261 5.3E-21 T 14-10-2018 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type GO:0003755 GYO_0085 853114e7639c23e5d20f805c7dc90ab2 297 SUPERFAMILY SSF109998 38 183 1.53E-24 T 14-10-2018 IPR027304 Trigger factor/SurA domain superfamily GYO_0085 853114e7639c23e5d20f805c7dc90ab2 297 Gene3D G3DSA:1.10.4030.10 40 134 1.3E-5 T 14-10-2018 GYO_0085 853114e7639c23e5d20f805c7dc90ab2 297 Gene3D G3DSA:3.10.50.40 153 256 1.1E-21 T 14-10-2018 GYO_0085 853114e7639c23e5d20f805c7dc90ab2 297 SUPERFAMILY SSF54534 147 246 1.26E-18 T 14-10-2018 GYO_2032 7c0a08a0d21e9c6a415e54e324a45f97 404 Pfam PF00696 Amino acid kinase family 2 235 6.9E-48 T 14-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 GYO_2032 7c0a08a0d21e9c6a415e54e324a45f97 404 SUPERFAMILY SSF53633 3 247 3.14E-68 T 14-10-2018 IPR036393 Acetylglutamate kinase-like superfamily GYO_2032 7c0a08a0d21e9c6a415e54e324a45f97 404 SUPERFAMILY SSF55021 335 403 9.67E-15 T 14-10-2018 GYO_2032 7c0a08a0d21e9c6a415e54e324a45f97 404 Gene3D G3DSA:3.30.2130.10 257 404 4.2E-30 T 14-10-2018 GYO_2032 7c0a08a0d21e9c6a415e54e324a45f97 404 SUPERFAMILY SSF55021 260 346 1.26E-12 T 14-10-2018 GYO_2032 7c0a08a0d21e9c6a415e54e324a45f97 404 Pfam PF13840 ACT domain 336 398 3.1E-19 T 14-10-2018 IPR027795 CASTOR, ACT domain GYO_2032 7c0a08a0d21e9c6a415e54e324a45f97 404 TIGRFAM TIGR00657 asp_kinases: aspartate kinase 65 401 8.6E-90 T 14-10-2018 IPR001341 Aspartate kinase GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 GYO_2032 7c0a08a0d21e9c6a415e54e324a45f97 404 ProSitePatterns PS00324 Aspartokinase signature. 5 13 - T 14-10-2018 IPR018042 Aspartate kinase, conserved site GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 GYO_2032 7c0a08a0d21e9c6a415e54e324a45f97 404 PIRSF PIRSF000726 59 404 1.2E-85 T 14-10-2018 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 GYO_2032 7c0a08a0d21e9c6a415e54e324a45f97 404 PIRSF PIRSF000726 1 63 2.6E-8 T 14-10-2018 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 GYO_2032 7c0a08a0d21e9c6a415e54e324a45f97 404 TIGRFAM TIGR00656 asp_kin_monofn: aspartate kinase, monofunctional class 2 403 1.2E-154 T 14-10-2018 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 GYO_2032 7c0a08a0d21e9c6a415e54e324a45f97 404 Gene3D G3DSA:3.40.1160.10 1 256 5.1E-82 T 14-10-2018 IPR036393 Acetylglutamate kinase-like superfamily GYO_1800 98af6db1699419278e52fd4eeaadbab3 470 Gene3D G3DSA:3.30.390.30 348 468 3.9E-44 T 14-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 GYO_1800 98af6db1699419278e52fd4eeaadbab3 470 Gene3D G3DSA:3.50.50.60 152 273 2.6E-128 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily GYO_1800 98af6db1699419278e52fd4eeaadbab3 470 SUPERFAMILY SSF55424 346 468 1.63E-41 T 14-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 GYO_1800 98af6db1699419278e52fd4eeaadbab3 470 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 11 330 1.0E-74 T 14-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 GYO_1800 98af6db1699419278e52fd4eeaadbab3 470 SUPERFAMILY SSF51905 7 340 1.14E-68 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily GYO_1800 98af6db1699419278e52fd4eeaadbab3 470 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 44 54 - T 14-10-2018 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 GYO_1800 98af6db1699419278e52fd4eeaadbab3 470 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 140 158 2.8E-43 T 14-10-2018 GYO_1800 98af6db1699419278e52fd4eeaadbab3 470 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 178 196 2.8E-43 T 14-10-2018 GYO_1800 98af6db1699419278e52fd4eeaadbab3 470 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 295 317 2.8E-43 T 14-10-2018 GYO_1800 98af6db1699419278e52fd4eeaadbab3 470 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 12 31 2.8E-43 T 14-10-2018 GYO_1800 98af6db1699419278e52fd4eeaadbab3 470 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 266 282 2.8E-43 T 14-10-2018 GYO_1800 98af6db1699419278e52fd4eeaadbab3 470 PIRSF PIRSF000350 3 459 4.1E-99 T 14-10-2018 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I GO:0009055|GO:0016491 GYO_1800 98af6db1699419278e52fd4eeaadbab3 470 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 349 457 9.1E-38 T 14-10-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 GYO_1800 98af6db1699419278e52fd4eeaadbab3 470 Gene3D G3DSA:3.50.50.60 13 335 2.6E-128 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily GYO_1800 98af6db1699419278e52fd4eeaadbab3 470 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 178 203 1.0E-75 T 14-10-2018 GYO_1800 98af6db1699419278e52fd4eeaadbab3 470 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 410 425 1.0E-75 T 14-10-2018 GYO_1800 98af6db1699419278e52fd4eeaadbab3 470 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 267 281 1.0E-75 T 14-10-2018 GYO_1800 98af6db1699419278e52fd4eeaadbab3 470 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 432 452 1.0E-75 T 14-10-2018 GYO_1800 98af6db1699419278e52fd4eeaadbab3 470 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 11 33 1.0E-75 T 14-10-2018 GYO_1800 98af6db1699419278e52fd4eeaadbab3 470 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 143 152 1.0E-75 T 14-10-2018 GYO_1800 98af6db1699419278e52fd4eeaadbab3 470 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 345 366 1.0E-75 T 14-10-2018 GYO_1800 98af6db1699419278e52fd4eeaadbab3 470 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 43 58 1.0E-75 T 14-10-2018 GYO_1800 98af6db1699419278e52fd4eeaadbab3 470 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 310 317 1.0E-75 T 14-10-2018 GYO_1800 98af6db1699419278e52fd4eeaadbab3 470 TIGRFAM TIGR01350 lipoamide_DH: dihydrolipoyl dehydrogenase 10 468 1.7E-183 T 14-10-2018 IPR006258 Dihydrolipoamide dehydrogenase GO:0004148|GO:0050660|GO:0055114 KEGG: 00010+1.8.1.4|KEGG: 00020+1.8.1.4|KEGG: 00260+1.8.1.4|KEGG: 00280+1.8.1.4|KEGG: 00620+1.8.1.4|KEGG: 00640+1.8.1.4|MetaCyc: PWY-5046|MetaCyc: PWY-5084|Reactome: R-HSA-204174|Reactome: R-HSA-389661|Reactome: R-HSA-5362517|Reactome: R-HSA-6783984|Reactome: R-HSA-70268|Reactome: R-HSA-70895|Reactome: R-HSA-71064|Reactome: R-HSA-71403 GYO_0255 259d990159e85ed6071038ced873028d 377 Gene3D G3DSA:1.25.40.10 1 377 1.7E-123 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 GYO_0255 259d990159e85ed6071038ced873028d 377 Pfam PF13424 Tetratricopeptide repeat 197 253 3.9E-11 T 14-10-2018 GYO_0255 259d990159e85ed6071038ced873028d 377 SUPERFAMILY SSF48452 118 308 9.86E-21 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 GYO_0255 259d990159e85ed6071038ced873028d 377 SMART SM00028 100 133 43.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 GYO_0255 259d990159e85ed6071038ced873028d 377 SMART SM00028 140 173 30.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 GYO_0255 259d990159e85ed6071038ced873028d 377 SMART SM00028 260 293 44.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 GYO_0255 259d990159e85ed6071038ced873028d 377 SMART SM00028 221 254 0.0012 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 GYO_0334 259d990159e85ed6071038ced873028d 377 Gene3D G3DSA:1.25.40.10 1 377 1.7E-123 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 GYO_0334 259d990159e85ed6071038ced873028d 377 Pfam PF13424 Tetratricopeptide repeat 197 253 3.9E-11 T 14-10-2018 GYO_0334 259d990159e85ed6071038ced873028d 377 SUPERFAMILY SSF48452 118 308 9.86E-21 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 GYO_0334 259d990159e85ed6071038ced873028d 377 SMART SM00028 100 133 43.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 GYO_0334 259d990159e85ed6071038ced873028d 377 SMART SM00028 140 173 30.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 GYO_0334 259d990159e85ed6071038ced873028d 377 SMART SM00028 260 293 44.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 GYO_0334 259d990159e85ed6071038ced873028d 377 SMART SM00028 221 254 0.0012 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 GYO_1061 f028d12af3dc0f0673b487b5e4e6c08f 278 Gene3D G3DSA:2.30.30.60 116 165 1.0E-17 T 14-10-2018 IPR023408 Mechanosensitive ion channel MscS domain superfamily GYO_1061 f028d12af3dc0f0673b487b5e4e6c08f 278 Gene3D G3DSA:3.30.70.100 168 265 4.0E-8 T 14-10-2018 GYO_1061 f028d12af3dc0f0673b487b5e4e6c08f 278 SUPERFAMILY SSF82861 14 99 3.14E-11 T 14-10-2018 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 GYO_1061 f028d12af3dc0f0673b487b5e4e6c08f 278 SUPERFAMILY SSF50182 101 164 5.56E-11 T 14-10-2018 IPR010920 LSM domain superfamily GYO_1061 f028d12af3dc0f0673b487b5e4e6c08f 278 Pfam PF00924 Mechanosensitive ion channel 59 265 1.8E-32 T 14-10-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 GYO_1834 24fe6e98d12f907497c7cfd1ef9a22c2 622 Gene3D G3DSA:1.20.210.10 3 529 5.8E-203 T 14-10-2018 IPR036927 Cytochrome c oxidase-like, subunit I superfamily GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 GYO_1834 24fe6e98d12f907497c7cfd1ef9a22c2 622 PRINTS PR01165 Cytochrome c oxidase subunit I signature 348 366 2.2E-104 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 GYO_1834 24fe6e98d12f907497c7cfd1ef9a22c2 622 PRINTS PR01165 Cytochrome c oxidase subunit I signature 289 304 2.2E-104 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 GYO_1834 24fe6e98d12f907497c7cfd1ef9a22c2 622 PRINTS PR01165 Cytochrome c oxidase subunit I signature 376 395 2.2E-104 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 GYO_1834 24fe6e98d12f907497c7cfd1ef9a22c2 622 PRINTS PR01165 Cytochrome c oxidase subunit I signature 163 181 2.2E-104 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 GYO_1834 24fe6e98d12f907497c7cfd1ef9a22c2 622 PRINTS PR01165 Cytochrome c oxidase subunit I signature 91 115 2.2E-104 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 GYO_1834 24fe6e98d12f907497c7cfd1ef9a22c2 622 PRINTS PR01165 Cytochrome c oxidase subunit I signature 192 211 2.2E-104 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 GYO_1834 24fe6e98d12f907497c7cfd1ef9a22c2 622 PRINTS PR01165 Cytochrome c oxidase subunit I signature 426 447 2.2E-104 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 GYO_1834 24fe6e98d12f907497c7cfd1ef9a22c2 622 PRINTS PR01165 Cytochrome c oxidase subunit I signature 64 87 2.2E-104 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 GYO_1834 24fe6e98d12f907497c7cfd1ef9a22c2 622 PRINTS PR01165 Cytochrome c oxidase subunit I signature 17 42 2.2E-104 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 GYO_1834 24fe6e98d12f907497c7cfd1ef9a22c2 622 PRINTS PR01165 Cytochrome c oxidase subunit I signature 133 145 2.2E-104 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 GYO_1834 24fe6e98d12f907497c7cfd1ef9a22c2 622 PRINTS PR01165 Cytochrome c oxidase subunit I signature 243 264 2.2E-104 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 GYO_1834 24fe6e98d12f907497c7cfd1ef9a22c2 622 PRINTS PR01165 Cytochrome c oxidase subunit I signature 313 334 2.2E-104 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 GYO_1834 24fe6e98d12f907497c7cfd1ef9a22c2 622 Pfam PF00115 Cytochrome C and Quinol oxidase polypeptide I 26 469 1.3E-145 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 GYO_1834 24fe6e98d12f907497c7cfd1ef9a22c2 622 SUPERFAMILY SSF81442 14 523 1.96E-176 T 14-10-2018 IPR036927 Cytochrome c oxidase-like, subunit I superfamily GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 GYO_1834 24fe6e98d12f907497c7cfd1ef9a22c2 622 ProSitePatterns PS00077 Heme-copper oxidase catalytic subunit, copper B binding region signature. 245 299 - T 14-10-2018 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 GYO_1834 24fe6e98d12f907497c7cfd1ef9a22c2 622 TIGRFAM TIGR02891 CtaD_CoxA: cytochrome c oxidase, subunit I 18 521 6.0E-207 T 14-10-2018 IPR014241 Cytochrome c oxidase, subunit I bacterial type GO:0004129|GO:0005886|GO:0015990|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279 GYO_0564 40d6ecd3b75824ca8b6bf54b0cf39dbc 1275 SUPERFAMILY SSF53474 1054 1267 5.71E-36 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold GYO_0564 40d6ecd3b75824ca8b6bf54b0cf39dbc 1275 Gene3D G3DSA:1.10.1200.10 965 1042 2.2E-27 T 14-10-2018 IPR036736 ACP-like superfamily GYO_0564 40d6ecd3b75824ca8b6bf54b0cf39dbc 1275 Gene3D G3DSA:3.40.50.980 492 627 6.0E-120 T 14-10-2018 GYO_0564 40d6ecd3b75824ca8b6bf54b0cf39dbc 1275 Gene3D G3DSA:3.30.559.30 194 447 2.1E-164 T 14-10-2018 GYO_0564 40d6ecd3b75824ca8b6bf54b0cf39dbc 1275 Gene3D G3DSA:1.10.287.490 1152 1206 2.9E-74 T 14-10-2018 GYO_0564 40d6ecd3b75824ca8b6bf54b0cf39dbc 1275 Pfam PF00975 Thioesterase domain 1060 1258 4.4E-37 T 14-10-2018 IPR001031 Thioesterase GO:0009058|GO:0016788 Reactome: R-HSA-75105 GYO_0564 40d6ecd3b75824ca8b6bf54b0cf39dbc 1275 Pfam PF13193 AMP-binding enzyme C-terminal domain 875 948 7.6E-14 T 14-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain GYO_0564 40d6ecd3b75824ca8b6bf54b0cf39dbc 1275 SUPERFAMILY SSF47336 968 1039 9.16E-21 T 14-10-2018 IPR036736 ACP-like superfamily GYO_0564 40d6ecd3b75824ca8b6bf54b0cf39dbc 1275 Gene3D G3DSA:2.30.38.10 780 857 5.6E-33 T 14-10-2018 GYO_0564 40d6ecd3b75824ca8b6bf54b0cf39dbc 1275 SUPERFAMILY SSF52777 193 434 3.45E-53 T 14-10-2018 GYO_0564 40d6ecd3b75824ca8b6bf54b0cf39dbc 1275 Gene3D G3DSA:3.40.50.1820 1057 1263 2.9E-74 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold GYO_0564 40d6ecd3b75824ca8b6bf54b0cf39dbc 1275 SUPERFAMILY SSF56801 429 986 3.01E-156 T 14-10-2018 GYO_0564 40d6ecd3b75824ca8b6bf54b0cf39dbc 1275 Gene3D G3DSA:3.40.50.980 475 779 6.0E-120 T 14-10-2018 GYO_0564 40d6ecd3b75824ca8b6bf54b0cf39dbc 1275 SMART SM00823 Phosphopantetheine attachment site 974 1043 0.0012 T 14-10-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 GYO_0564 40d6ecd3b75824ca8b6bf54b0cf39dbc 1275 Pfam PF00501 AMP-binding enzyme 470 867 2.0E-104 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 GYO_0564 40d6ecd3b75824ca8b6bf54b0cf39dbc 1275 Pfam PF00668 Condensation domain 9 451 8.3E-142 T 14-10-2018 IPR001242 Condensation domain GYO_0564 40d6ecd3b75824ca8b6bf54b0cf39dbc 1275 ProSitePatterns PS00455 Putative AMP-binding domain signature. 612 623 - T 14-10-2018 IPR020845 AMP-binding, conserved site GYO_0564 40d6ecd3b75824ca8b6bf54b0cf39dbc 1275 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 491 891 9.0E-129 T 14-10-2018 IPR010071 Amino acid adenylation domain GYO_0564 40d6ecd3b75824ca8b6bf54b0cf39dbc 1275 Gene3D G3DSA:3.30.559.10 15 382 2.1E-164 T 14-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 GYO_0564 40d6ecd3b75824ca8b6bf54b0cf39dbc 1275 Pfam PF00550 Phosphopantetheine attachment site 976 1039 4.1E-15 T 14-10-2018 IPR009081 Phosphopantetheine binding ACP domain GYO_0564 40d6ecd3b75824ca8b6bf54b0cf39dbc 1275 SUPERFAMILY SSF52777 15 192 5.11E-45 T 14-10-2018 GYO_0564 40d6ecd3b75824ca8b6bf54b0cf39dbc 1275 Gene3D G3DSA:3.30.300.30 862 964 2.4E-35 T 14-10-2018 GYO_1961 2767fce1ff3a7337e2f4ce179ea5484d 385 Pfam PF00549 CoA-ligase 262 381 5.4E-26 T 14-10-2018 IPR005811 ATP-citrate lyase/succinyl-CoA ligase GO:0003824 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 GYO_1961 2767fce1ff3a7337e2f4ce179ea5484d 385 Gene3D G3DSA:3.40.50.261 240 385 3.8E-57 T 14-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 GYO_1961 2767fce1ff3a7337e2f4ce179ea5484d 385 PIRSF PIRSF001554 1 385 8.3E-155 T 14-10-2018 IPR005809 Succinate--CoA synthetase, beta subunit GO:0006099 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 GYO_1961 2767fce1ff3a7337e2f4ce179ea5484d 385 Pfam PF08442 ATP-grasp domain 2 203 1.5E-84 T 14-10-2018 IPR013650 ATP-grasp fold, succinyl-CoA synthetase-type KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 GYO_1961 2767fce1ff3a7337e2f4ce179ea5484d 385 Gene3D G3DSA:3.30.470.20 1 234 2.3E-96 T 14-10-2018 GYO_1961 2767fce1ff3a7337e2f4ce179ea5484d 385 SUPERFAMILY SSF56059 1 238 1.59E-85 T 14-10-2018 GYO_1961 2767fce1ff3a7337e2f4ce179ea5484d 385 SUPERFAMILY SSF52210 239 384 2.09E-54 T 14-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 GYO_1961 2767fce1ff3a7337e2f4ce179ea5484d 385 Gene3D G3DSA:3.30.1490.20 21 104 2.3E-96 T 14-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 GYO_1961 2767fce1ff3a7337e2f4ce179ea5484d 385 ProSitePatterns PS01217 ATP-citrate lyase / succinyl-CoA ligases family signature 3. 257 282 - T 14-10-2018 IPR017866 Succinyl-CoA synthetase, beta subunit, conserved site KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 GYO_1961 2767fce1ff3a7337e2f4ce179ea5484d 385 Hamap MF_00558 Succinate--CoA ligase [ADP-forming] subunit beta [sucC]. 1 385 44.385 T 14-10-2018 IPR005809 Succinate--CoA synthetase, beta subunit GO:0006099 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 GYO_1961 2767fce1ff3a7337e2f4ce179ea5484d 385 TIGRFAM TIGR01016 sucCoAbeta: succinate-CoA ligase, beta subunit 1 384 9.3E-168 T 14-10-2018 IPR005809 Succinate--CoA synthetase, beta subunit GO:0006099 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 GYO_0132 4b262c4e56ac9c79fea9c34bb4db9fd5 123 Gene3D G3DSA:3.30.1390.10 54 123 1.3E-30 T 14-10-2018 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like GYO_0132 4b262c4e56ac9c79fea9c34bb4db9fd5 123 Pfam PF00542 Ribosomal protein L7/L12 C-terminal domain 57 123 2.1E-30 T 14-10-2018 IPR013823 Ribosomal protein L7/L12, C-terminal GO:0003735|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 GYO_0132 4b262c4e56ac9c79fea9c34bb4db9fd5 123 Gene3D G3DSA:1.20.5.710 3 53 4.9E-20 T 14-10-2018 GYO_0132 4b262c4e56ac9c79fea9c34bb4db9fd5 123 SUPERFAMILY SSF48300 4 58 3.92E-16 T 14-10-2018 IPR036235 Ribosomal protein L7/L12, oligomerisation domain superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 GYO_0132 4b262c4e56ac9c79fea9c34bb4db9fd5 123 TIGRFAM TIGR00855 L12: ribosomal protein bL12 1 123 1.3E-51 T 14-10-2018 IPR000206 Ribosomal protein L7/L12 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 GYO_0132 4b262c4e56ac9c79fea9c34bb4db9fd5 123 Pfam PF16320 Ribosomal protein L7/L12 dimerisation domain 5 51 5.1E-20 T 14-10-2018 IPR008932 Ribosomal protein L7/L12, oligomerisation GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 GYO_0132 4b262c4e56ac9c79fea9c34bb4db9fd5 123 Hamap MF_00368 50S ribosomal protein L7/L12 [rplL]. 2 123 25.469 T 14-10-2018 IPR000206 Ribosomal protein L7/L12 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 GYO_0132 4b262c4e56ac9c79fea9c34bb4db9fd5 123 ProDom PD001326 RIBOSOMAL L7/L12 50S RIBONUCLEOPROTEIN CHLOROPLAST L12 PLASTID DIRECT SEQUENCING PEPTIDE 58 96 7.0E-15 T 14-10-2018 IPR013823 Ribosomal protein L7/L12, C-terminal GO:0003735|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 GYO_0132 4b262c4e56ac9c79fea9c34bb4db9fd5 123 SUPERFAMILY SSF54736 52 123 1.05E-24 T 14-10-2018 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like GYO_0859 cc57a33c5d5fc26c5fb820450a725431 642 Pfam PF16326 ABC transporter C-terminal domain 562 638 1.5E-11 T 14-10-2018 IPR032524 ABC transporter Uup, C-terminal GO:0003677 GYO_0859 cc57a33c5d5fc26c5fb820450a725431 642 ProSitePatterns PS00211 ABC transporters family signature. 163 177 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 GYO_0859 cc57a33c5d5fc26c5fb820450a725431 642 SUPERFAMILY SSF52540 4 243 8.26E-46 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase GYO_0859 cc57a33c5d5fc26c5fb820450a725431 642 SUPERFAMILY SSF52540 311 534 9.28E-49 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase GYO_0859 cc57a33c5d5fc26c5fb820450a725431 642 Gene3D G3DSA:3.40.50.300 288 553 7.1E-65 T 14-10-2018 GYO_0859 cc57a33c5d5fc26c5fb820450a725431 642 Gene3D G3DSA:1.10.287.380 555 642 1.0E-5 T 14-10-2018 IPR037118 Valyl-tRNA synthetase, tRNA-binding arm superfamily GO:0000166|GO:0004832|GO:0005524|GO:0005737|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: R-HSA-379716 GYO_0859 cc57a33c5d5fc26c5fb820450a725431 642 Gene3D G3DSA:3.40.50.300 1 285 1.7E-68 T 14-10-2018 GYO_0859 cc57a33c5d5fc26c5fb820450a725431 642 ProSitePatterns PS00211 ABC transporters family signature. 445 459 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 GYO_0859 cc57a33c5d5fc26c5fb820450a725431 642 SMART SM00382 352 525 2.0E-13 T 14-10-2018 IPR003593 AAA+ ATPase domain GYO_0859 cc57a33c5d5fc26c5fb820450a725431 642 SMART SM00382 28 245 8.5E-11 T 14-10-2018 IPR003593 AAA+ ATPase domain GYO_0859 cc57a33c5d5fc26c5fb820450a725431 642 Pfam PF00005 ABC transporter 19 191 1.9E-28 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 GYO_0859 cc57a33c5d5fc26c5fb820450a725431 642 Pfam PF12848 ABC transporter 231 316 2.5E-25 T 14-10-2018 IPR032781 ABC-transporter extension domain GYO_0859 cc57a33c5d5fc26c5fb820450a725431 642 Pfam PF00005 ABC transporter 343 473 7.6E-24 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 GYO_2054 be9ce61cc9c343afe2c2dfe30fac6ede 342 Gene3D G3DSA:3.90.180.10 17 333 3.7E-117 T 14-10-2018 GYO_2054 be9ce61cc9c343afe2c2dfe30fac6ede 342 SUPERFAMILY SSF51735 142 298 5.65E-36 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily GYO_2054 be9ce61cc9c343afe2c2dfe30fac6ede 342 Pfam PF00107 Zinc-binding dehydrogenase 174 303 2.5E-30 T 14-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 GYO_2054 be9ce61cc9c343afe2c2dfe30fac6ede 342 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 26 134 1.8E-31 T 14-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 GYO_2054 be9ce61cc9c343afe2c2dfe30fac6ede 342 SUPERFAMILY SSF50129 1 173 1.26E-49 T 14-10-2018 IPR011032 GroES-like superfamily GYO_2054 be9ce61cc9c343afe2c2dfe30fac6ede 342 Gene3D G3DSA:3.40.50.720 153 287 3.7E-117 T 14-10-2018 GYO_2054 be9ce61cc9c343afe2c2dfe30fac6ede 342 Hamap MF_00627 L-threonine 3-dehydrogenase [tdh]. 1 342 54.261 T 14-10-2018 IPR004627 L-threonine 3-dehydrogenase GO:0006567|GO:0008270|GO:0008743|GO:0055114 KEGG: 00260+1.1.1.103|MetaCyc: PWY-7378 GYO_2054 be9ce61cc9c343afe2c2dfe30fac6ede 342 TIGRFAM TIGR00692 tdh: L-threonine 3-dehydrogenase 3 341 1.7E-189 T 14-10-2018 IPR004627 L-threonine 3-dehydrogenase GO:0006567|GO:0008270|GO:0008743|GO:0055114 KEGG: 00260+1.1.1.103|MetaCyc: PWY-7378 GYO_2054 be9ce61cc9c343afe2c2dfe30fac6ede 342 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 62 76 - T 14-10-2018 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 GYO_2054 be9ce61cc9c343afe2c2dfe30fac6ede 342 SMART SM00829 12 340 4.9E-7 T 14-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 GYO_0242 ace76a02591ad4933dad05433ea2abfa 88 ProDom PD028957 PBSX RELATED XKDR ELEMENT LIN1285 PHAGE PHAGE-LIKE YQBR 3 88 4.0E-34 T 14-10-2018 IPR022555 Protein of unknown function, DUF2577 GYO_0242 ace76a02591ad4933dad05433ea2abfa 88 Pfam PF10844 Protein of unknown function (DUF2577) 7 59 2.4E-6 T 14-10-2018 IPR022555 Protein of unknown function, DUF2577 GYO_0321 ace76a02591ad4933dad05433ea2abfa 88 ProDom PD028957 PBSX RELATED XKDR ELEMENT LIN1285 PHAGE PHAGE-LIKE YQBR 3 88 4.0E-34 T 14-10-2018 IPR022555 Protein of unknown function, DUF2577 GYO_0321 ace76a02591ad4933dad05433ea2abfa 88 Pfam PF10844 Protein of unknown function (DUF2577) 7 59 2.4E-6 T 14-10-2018 IPR022555 Protein of unknown function, DUF2577 GYO_3152 29d0ec5c8e24d062612675e075d0d18b 340 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 173 189 3.4E-41 T 14-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 GYO_3152 29d0ec5c8e24d062612675e075d0d18b 340 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 269 284 3.4E-41 T 14-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 GYO_3152 29d0ec5c8e24d062612675e075d0d18b 340 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 109 122 3.4E-41 T 14-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 GYO_3152 29d0ec5c8e24d062612675e075d0d18b 340 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 146 164 3.4E-41 T 14-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 GYO_3152 29d0ec5c8e24d062612675e075d0d18b 340 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 229 246 3.4E-41 T 14-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 GYO_3152 29d0ec5c8e24d062612675e075d0d18b 340 Gene3D G3DSA:3.30.360.10 151 315 9.0E-152 T 14-10-2018 GYO_3152 29d0ec5c8e24d062612675e075d0d18b 340 Gene3D G3DSA:3.40.50.720 4 328 9.0E-152 T 14-10-2018 GYO_3152 29d0ec5c8e24d062612675e075d0d18b 340 ProSitePatterns PS00071 Glyceraldehyde 3-phosphate dehydrogenase active site. 150 157 - T 14-10-2018 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 GYO_3152 29d0ec5c8e24d062612675e075d0d18b 340 TIGRFAM TIGR01534 GAPDH-I: glyceraldehyde-3-phosphate dehydrogenase, type I 4 325 1.3E-134 T 14-10-2018 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I GO:0006006|GO:0016620|GO:0050661|GO:0051287|GO:0055114 KEGG: 00010+1.2.1.12|KEGG: 00710+1.2.1.12|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 GYO_3152 29d0ec5c8e24d062612675e075d0d18b 340 SUPERFAMILY SSF55347 152 314 2.14E-71 T 14-10-2018 GYO_3152 29d0ec5c8e24d062612675e075d0d18b 340 SUPERFAMILY SSF51735 1 178 1.95E-61 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily GYO_3152 29d0ec5c8e24d062612675e075d0d18b 340 PIRSF PIRSF000149 1 335 1.9E-140 T 14-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 GYO_3152 29d0ec5c8e24d062612675e075d0d18b 340 SMART SM00846 3 152 4.5E-87 T 14-10-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 GYO_3152 29d0ec5c8e24d062612675e075d0d18b 340 Pfam PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain 3 102 8.5E-38 T 14-10-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 GYO_3152 29d0ec5c8e24d062612675e075d0d18b 340 Pfam PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain 157 313 6.1E-69 T 14-10-2018 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 GYO_1012 c71c050ce9d69b4a1657fce3e35f5f1f 406 Pfam PF07690 Major Facilitator Superfamily 9 317 2.9E-14 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 GYO_1012 c71c050ce9d69b4a1657fce3e35f5f1f 406 Gene3D G3DSA:1.20.1250.20 3 389 7.3E-28 T 14-10-2018 GYO_1012 c71c050ce9d69b4a1657fce3e35f5f1f 406 SUPERFAMILY SSF103473 7 398 1.57E-33 T 14-10-2018 IPR036259 MFS transporter superfamily GYO_3678 a46933b124afcc63f3d3986b9e08bb93 779 SMART SM00955 248 578 1.1E-183 T 14-10-2018 IPR001900 Ribonuclease II/R GO:0003723|GO:0004540 GYO_3678 a46933b124afcc63f3d3986b9e08bb93 779 SUPERFAMILY SSF50249 55 135 3.0E-17 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold GYO_3678 a46933b124afcc63f3d3986b9e08bb93 779 TIGRFAM TIGR02063 RNase_R: ribonuclease R 7 708 4.4E-289 T 14-10-2018 IPR011805 Ribonuclease R GO:0003723|GO:0004518 GYO_3678 a46933b124afcc63f3d3986b9e08bb93 779 Pfam PF00773 RNB domain 248 576 1.4E-117 T 14-10-2018 IPR001900 Ribonuclease II/R GO:0003723|GO:0004540 GYO_3678 a46933b124afcc63f3d3986b9e08bb93 779 SMART SM00316 626 708 2.1E-20 T 14-10-2018 IPR022967 RNA-binding domain, S1 GYO_3678 a46933b124afcc63f3d3986b9e08bb93 779 Pfam PF08206 Ribonuclease B OB domain 74 132 2.2E-20 T 14-10-2018 IPR013223 Ribonuclease B, N-terminal OB domain GYO_3678 a46933b124afcc63f3d3986b9e08bb93 779 Pfam PF08206 Ribonuclease B OB domain 149 199 1.4E-7 T 14-10-2018 IPR013223 Ribonuclease B, N-terminal OB domain GYO_3678 a46933b124afcc63f3d3986b9e08bb93 779 TIGRFAM TIGR00358 3_prime_RNase: VacB and RNase II family 3'-5' exoribonucleases 58 708 9.5E-283 T 14-10-2018 IPR004476 Ribonuclease II/ribonuclease R GO:0003723|GO:0004540|GO:0016070 GYO_3678 a46933b124afcc63f3d3986b9e08bb93 779 Pfam PF00575 S1 RNA binding domain 625 707 7.5E-17 T 14-10-2018 IPR003029 S1 domain GO:0003676 GYO_3678 a46933b124afcc63f3d3986b9e08bb93 779 SUPERFAMILY SSF50249 208 625 6.85E-150 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold GYO_3678 a46933b124afcc63f3d3986b9e08bb93 779 Gene3D G3DSA:2.40.50.140 629 738 2.2E-26 T 14-10-2018 GYO_3678 a46933b124afcc63f3d3986b9e08bb93 779 SUPERFAMILY SSF50249 626 706 7.01E-24 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold GYO_3678 a46933b124afcc63f3d3986b9e08bb93 779 SUPERFAMILY SSF50249 126 225 1.53E-20 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold GYO_3678 a46933b124afcc63f3d3986b9e08bb93 779 Gene3D G3DSA:2.40.50.140 60 134 3.7E-18 T 14-10-2018 GYO_3678 a46933b124afcc63f3d3986b9e08bb93 779 Gene3D G3DSA:2.40.50.140 135 203 1.0E-9 T 14-10-2018 GYO_3678 a46933b124afcc63f3d3986b9e08bb93 779 ProSitePatterns PS01175 Ribonuclease II family signature. 545 569 - T 14-10-2018 IPR022966 Ribonuclease II/R, conserved site GYO_3678 a46933b124afcc63f3d3986b9e08bb93 779 Hamap MF_01895 Ribonuclease R [rnr]. 25 708 62.849 T 14-10-2018 IPR011805 Ribonuclease R GO:0003723|GO:0004518 GYO_3678 a46933b124afcc63f3d3986b9e08bb93 779 SMART SM00357 138 202 2.0E-12 T 14-10-2018 IPR011129 Cold shock domain GO:0003676 GYO_3678 a46933b124afcc63f3d3986b9e08bb93 779 SMART SM00357 73 133 3.5E-14 T 14-10-2018 IPR011129 Cold shock domain GO:0003676 GYO_0746 1fc37f70f8e91146cb8d1f399e7be4dd 235 Gene3D G3DSA:3.40.50.720 1 235 9.2E-72 T 14-10-2018 GYO_0746 1fc37f70f8e91146cb8d1f399e7be4dd 235 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 159 178 2.3E-10 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR GYO_0746 1fc37f70f8e91146cb8d1f399e7be4dd 235 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 136 144 2.3E-10 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR GYO_0746 1fc37f70f8e91146cb8d1f399e7be4dd 235 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 81 92 2.3E-10 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR GYO_0746 1fc37f70f8e91146cb8d1f399e7be4dd 235 Pfam PF00106 short chain dehydrogenase 6 198 2.3E-49 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR GYO_0746 1fc37f70f8e91146cb8d1f399e7be4dd 235 SUPERFAMILY SSF51735 1 227 3.8E-58 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily GYO_0746 1fc37f70f8e91146cb8d1f399e7be4dd 235 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 81 92 1.6E-32 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR GYO_0746 1fc37f70f8e91146cb8d1f399e7be4dd 235 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 179 196 1.6E-32 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR GYO_0746 1fc37f70f8e91146cb8d1f399e7be4dd 235 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 1.6E-32 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR GYO_0746 1fc37f70f8e91146cb8d1f399e7be4dd 235 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 197 217 1.6E-32 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR GYO_0746 1fc37f70f8e91146cb8d1f399e7be4dd 235 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 130 146 1.6E-32 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR GYO_0746 1fc37f70f8e91146cb8d1f399e7be4dd 235 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 159 178 1.6E-32 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR GYO_2200 ad8e26a7d6f7a88e6acdbe6a48f66508 2611 Gene3D G3DSA:3.40.50.980 291 423 3.3E-109 T 14-10-2018 GYO_2200 ad8e26a7d6f7a88e6acdbe6a48f66508 2611 Gene3D G3DSA:1.20.890.40 2475 2527 7.0E-59 T 14-10-2018 GYO_2200 ad8e26a7d6f7a88e6acdbe6a48f66508 2611 SUPERFAMILY SSF52777 1047 1295 2.11E-40 T 14-10-2018 GYO_2200 ad8e26a7d6f7a88e6acdbe6a48f66508 2611 Gene3D G3DSA:3.40.50.1820 2371 2582 7.0E-59 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold GYO_2200 ad8e26a7d6f7a88e6acdbe6a48f66508 2611 Gene3D G3DSA:3.30.559.30 1509 1765 2.4E-134 T 14-10-2018 GYO_2200 ad8e26a7d6f7a88e6acdbe6a48f66508 2611 SUPERFAMILY SSF47336 771 843 5.76E-18 T 14-10-2018 IPR036736 ACP-like superfamily GYO_2200 ad8e26a7d6f7a88e6acdbe6a48f66508 2611 ProSitePatterns PS00012 Phosphopantetheine attachment site. 803 818 - T 14-10-2018 IPR006162 Phosphopantetheine attachment site GYO_2200 ad8e26a7d6f7a88e6acdbe6a48f66508 2611 SUPERFAMILY SSF47336 2282 2355 6.54E-17 T 14-10-2018 IPR036736 ACP-like superfamily GYO_2200 ad8e26a7d6f7a88e6acdbe6a48f66508 2611 SMART SM00824 Thioesterase 2380 2537 6.6E-5 T 14-10-2018 IPR020802 Polyketide synthase, thioesterase domain GO:0009058|GO:0016788 GYO_2200 ad8e26a7d6f7a88e6acdbe6a48f66508 2611 Pfam PF13193 AMP-binding enzyme C-terminal domain 2191 2263 1.3E-11 T 14-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain GYO_2200 ad8e26a7d6f7a88e6acdbe6a48f66508 2611 Pfam PF13193 AMP-binding enzyme C-terminal domain 681 753 1.8E-8 T 14-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain GYO_2200 ad8e26a7d6f7a88e6acdbe6a48f66508 2611 Gene3D G3DSA:1.10.1200.10 2278 2359 2.1E-22 T 14-10-2018 IPR036736 ACP-like superfamily GYO_2200 ad8e26a7d6f7a88e6acdbe6a48f66508 2611 Gene3D G3DSA:1.10.1200.10 768 845 1.3E-21 T 14-10-2018 IPR036736 ACP-like superfamily GYO_2200 ad8e26a7d6f7a88e6acdbe6a48f66508 2611 Gene3D G3DSA:3.30.559.10 1330 1700 2.4E-134 T 14-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 GYO_2200 ad8e26a7d6f7a88e6acdbe6a48f66508 2611 Gene3D G3DSA:2.30.38.10 587 663 4.5E-35 T 14-10-2018 GYO_2200 ad8e26a7d6f7a88e6acdbe6a48f66508 2611 Gene3D G3DSA:3.40.50.980 274 586 3.3E-109 T 14-10-2018 GYO_2200 ad8e26a7d6f7a88e6acdbe6a48f66508 2611 SUPERFAMILY SSF56801 231 792 1.23E-163 T 14-10-2018 GYO_2200 ad8e26a7d6f7a88e6acdbe6a48f66508 2611 SUPERFAMILY SSF52777 1508 1757 1.78E-53 T 14-10-2018 GYO_2200 ad8e26a7d6f7a88e6acdbe6a48f66508 2611 ProSitePatterns PS00455 Putative AMP-binding domain signature. 408 419 - T 14-10-2018 IPR020845 AMP-binding, conserved site GYO_2200 ad8e26a7d6f7a88e6acdbe6a48f66508 2611 Gene3D G3DSA:3.30.559.30 1026 1295 4.5E-72 T 14-10-2018 GYO_2200 ad8e26a7d6f7a88e6acdbe6a48f66508 2611 ProSitePatterns PS00455 Putative AMP-binding domain signature. 1928 1939 - T 14-10-2018 IPR020845 AMP-binding, conserved site GYO_2200 ad8e26a7d6f7a88e6acdbe6a48f66508 2611 SUPERFAMILY SSF53474 2364 2582 2.1E-32 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold GYO_2200 ad8e26a7d6f7a88e6acdbe6a48f66508 2611 Gene3D G3DSA:3.40.50.12780 1774 2177 9.7E-134 T 14-10-2018 GYO_2200 ad8e26a7d6f7a88e6acdbe6a48f66508 2611 Gene3D G3DSA:3.30.559.10 846 1025 9.4E-59 T 14-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 GYO_2200 ad8e26a7d6f7a88e6acdbe6a48f66508 2611 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 1810 2207 7.3E-142 T 14-10-2018 IPR010071 Amino acid adenylation domain GYO_2200 ad8e26a7d6f7a88e6acdbe6a48f66508 2611 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 290 697 4.7E-143 T 14-10-2018 IPR010071 Amino acid adenylation domain GYO_2200 ad8e26a7d6f7a88e6acdbe6a48f66508 2611 ProSitePatterns PS00012 Phosphopantetheine attachment site. 2314 2329 - T 14-10-2018 IPR006162 Phosphopantetheine attachment site GYO_2200 ad8e26a7d6f7a88e6acdbe6a48f66508 2611 SUPERFAMILY SSF52777 861 1035 1.78E-36 T 14-10-2018 GYO_2200 ad8e26a7d6f7a88e6acdbe6a48f66508 2611 Gene3D G3DSA:3.30.300.30 2178 2277 5.8E-34 T 14-10-2018 GYO_2200 ad8e26a7d6f7a88e6acdbe6a48f66508 2611 Gene3D G3DSA:3.30.300.30 668 767 1.2E-30 T 14-10-2018 GYO_2200 ad8e26a7d6f7a88e6acdbe6a48f66508 2611 SUPERFAMILY SSF52777 1322 1523 4.78E-42 T 14-10-2018 GYO_2200 ad8e26a7d6f7a88e6acdbe6a48f66508 2611 Pfam PF00975 Thioesterase domain 2378 2476 1.6E-22 T 14-10-2018 IPR001031 Thioesterase GO:0009058|GO:0016788 Reactome: R-HSA-75105 GYO_2200 ad8e26a7d6f7a88e6acdbe6a48f66508 2611 Gene3D G3DSA:3.30.559.30 2 241 6.7E-20 T 14-10-2018 GYO_2200 ad8e26a7d6f7a88e6acdbe6a48f66508 2611 Pfam PF00668 Condensation domain 859 1299 2.5E-103 T 14-10-2018 IPR001242 Condensation domain GYO_2200 ad8e26a7d6f7a88e6acdbe6a48f66508 2611 Pfam PF00668 Condensation domain 1325 1768 4.0E-115 T 14-10-2018 IPR001242 Condensation domain GYO_2200 ad8e26a7d6f7a88e6acdbe6a48f66508 2611 Pfam PF00668 Condensation domain 3 245 1.5E-14 T 14-10-2018 IPR001242 Condensation domain GYO_2200 ad8e26a7d6f7a88e6acdbe6a48f66508 2611 Pfam PF00501 AMP-binding enzyme 269 673 2.9E-109 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 GYO_2200 ad8e26a7d6f7a88e6acdbe6a48f66508 2611 Pfam PF00501 AMP-binding enzyme 1789 2183 4.2E-101 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 GYO_2200 ad8e26a7d6f7a88e6acdbe6a48f66508 2611 Pfam PF00550 Phosphopantetheine attachment site 2292 2355 6.2E-9 T 14-10-2018 IPR009081 Phosphopantetheine binding ACP domain GYO_2200 ad8e26a7d6f7a88e6acdbe6a48f66508 2611 Pfam PF00550 Phosphopantetheine attachment site 782 842 2.5E-10 T 14-10-2018 IPR009081 Phosphopantetheine binding ACP domain GYO_2200 ad8e26a7d6f7a88e6acdbe6a48f66508 2611 SUPERFAMILY SSF52777 3 238 1.04E-16 T 14-10-2018 GYO_2200 ad8e26a7d6f7a88e6acdbe6a48f66508 2611 TIGRFAM TIGR01720 NRPS-para261: non-ribosomal peptide synthase domain TIGR01720 1163 1313 2.6E-47 T 14-10-2018 IPR010060 Non-ribosomal peptide synthase GYO_2200 ad8e26a7d6f7a88e6acdbe6a48f66508 2611 SUPERFAMILY SSF56801 1747 2301 2.35E-156 T 14-10-2018 GYO_0400 5e799dc7a605c7cdbd279a28c7e1ba76 417 SUPERFAMILY SSF48264 11 415 1.96E-68 T 14-10-2018 IPR036396 Cytochrome P450 superfamily GO:0005506|GO:0016705|GO:0020037|GO:0055114 GYO_0400 5e799dc7a605c7cdbd279a28c7e1ba76 417 PRINTS PR00463 E-class P450 group I signature 317 341 2.0E-8 T 14-10-2018 IPR002401 Cytochrome P450, E-class, group I GO:0005506|GO:0016705|GO:0020037|GO:0055114 GYO_0400 5e799dc7a605c7cdbd279a28c7e1ba76 417 PRINTS PR00463 E-class P450 group I signature 363 386 2.0E-8 T 14-10-2018 IPR002401 Cytochrome P450, E-class, group I GO:0005506|GO:0016705|GO:0020037|GO:0055114 GYO_0400 5e799dc7a605c7cdbd279a28c7e1ba76 417 PRINTS PR00463 E-class P450 group I signature 277 295 2.0E-8 T 14-10-2018 IPR002401 Cytochrome P450, E-class, group I GO:0005506|GO:0016705|GO:0020037|GO:0055114 GYO_0400 5e799dc7a605c7cdbd279a28c7e1ba76 417 Pfam PF00067 Cytochrome P450 277 392 2.0E-16 T 14-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 GYO_0400 5e799dc7a605c7cdbd279a28c7e1ba76 417 Gene3D G3DSA:1.10.630.10 1 417 4.6E-182 T 14-10-2018 IPR036396 Cytochrome P450 superfamily GO:0005506|GO:0016705|GO:0020037|GO:0055114 GYO_2967 43ee94b6b88572e468ca428a54cee5f9 231 SUPERFAMILY SSF53167 1 229 7.59E-74 T 14-10-2018 IPR035994 Nucleoside phosphorylase superfamily GO:0003824|GO:0009116 GYO_2967 43ee94b6b88572e468ca428a54cee5f9 231 Gene3D G3DSA:3.40.50.1580 1 231 1.9E-71 T 14-10-2018 GYO_2967 43ee94b6b88572e468ca428a54cee5f9 231 Hamap MF_01684 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase [mtnN]. 2 230 47.909 T 14-10-2018 IPR010049 MTA/SAH nucleosidase GO:0008782|GO:0008930|GO:0009164|GO:0019509 KEGG: 00270+3.2.2.9|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 GYO_2967 43ee94b6b88572e468ca428a54cee5f9 231 TIGRFAM TIGR01704 MTA/SAH-Nsdase: MTA/SAH nucleosidase 2 230 1.8E-139 T 14-10-2018 IPR010049 MTA/SAH nucleosidase GO:0008782|GO:0008930|GO:0009164|GO:0019509 KEGG: 00270+3.2.2.9|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 GYO_2967 43ee94b6b88572e468ca428a54cee5f9 231 Pfam PF01048 Phosphorylase superfamily 2 227 3.2E-53 T 14-10-2018 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 GYO_3041 5ea3d1ca7c503f190104e572aa95c406 268 Gene3D G3DSA:3.40.50.300 3 255 2.3E-68 T 14-10-2018 GYO_3041 5ea3d1ca7c503f190104e572aa95c406 268 PIRSF PIRSF003092 1 268 1.9E-96 T 14-10-2018 IPR025501 ATP binding protein MinD GYO_3041 5ea3d1ca7c503f190104e572aa95c406 268 TIGRFAM TIGR01968 minD_bact: septum site-determining protein MinD 3 264 5.1E-127 T 14-10-2018 IPR010223 ATP binding protein MinD, bacterial-type GO:0016887 GYO_3041 5ea3d1ca7c503f190104e572aa95c406 268 SUPERFAMILY SSF52540 5 262 3.49E-58 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase GYO_3041 5ea3d1ca7c503f190104e572aa95c406 268 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 5 220 4.6E-26 T 14-10-2018 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain GYO_2025 f86ce88d7b808dc104977c951c596939 705 Gene3D G3DSA:3.30.1370.10 551 622 3.4E-21 T 14-10-2018 IPR036612 K Homology domain, type 1 superfamily GO:0003723 GYO_2025 f86ce88d7b808dc104977c951c596939 705 Pfam PF01138 3' exoribonuclease family, domain 1 324 457 2.9E-18 T 14-10-2018 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 GYO_2025 f86ce88d7b808dc104977c951c596939 705 Pfam PF01138 3' exoribonuclease family, domain 1 15 144 6.3E-20 T 14-10-2018 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 GYO_2025 f86ce88d7b808dc104977c951c596939 705 SUPERFAMILY SSF55666 451 550 6.41E-29 T 14-10-2018 IPR036345 Exoribonuclease, PH domain 2 superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 GYO_2025 f86ce88d7b808dc104977c951c596939 705 SUPERFAMILY SSF50249 621 704 2.43E-21 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold GYO_2025 f86ce88d7b808dc104977c951c596939 705 SMART SM00322 553 618 1.8E-13 T 14-10-2018 IPR004087 K Homology domain GO:0003676 GYO_2025 f86ce88d7b808dc104977c951c596939 705 SUPERFAMILY SSF54791 556 641 9.48E-24 T 14-10-2018 IPR036612 K Homology domain, type 1 superfamily GO:0003723 GYO_2025 f86ce88d7b808dc104977c951c596939 705 SUPERFAMILY SSF54211 293 488 4.81E-49 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold GYO_2025 f86ce88d7b808dc104977c951c596939 705 Hamap MF_01595 Polyribonucleotide nucleotidyltransferase [pnp]. 4 694 31.284 T 14-10-2018 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 GYO_2025 f86ce88d7b808dc104977c951c596939 705 TIGRFAM TIGR03591 polynuc_phos: polyribonucleotide nucleotidyltransferase 12 693 0.0 T 14-10-2018 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 GYO_2025 f86ce88d7b808dc104977c951c596939 705 Pfam PF00575 S1 RNA binding domain 620 691 5.3E-19 T 14-10-2018 IPR003029 S1 domain GO:0003676 GYO_2025 f86ce88d7b808dc104977c951c596939 705 Gene3D G3DSA:3.30.230.70 235 550 2.8E-122 T 14-10-2018 IPR027408 PNPase/RNase PH domain superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 GYO_2025 f86ce88d7b808dc104977c951c596939 705 Pfam PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain 241 320 1.5E-20 T 14-10-2018 IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain GO:0003723|GO:0006396 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 GYO_2025 f86ce88d7b808dc104977c951c596939 705 Pfam PF00013 KH domain 557 615 6.1E-10 T 14-10-2018 IPR004088 K Homology domain, type 1 GO:0003723 GYO_2025 f86ce88d7b808dc104977c951c596939 705 PIRSF PIRSF005499 2 705 0.0 T 14-10-2018 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 GYO_2025 f86ce88d7b808dc104977c951c596939 705 SMART SM00316 621 691 1.3E-24 T 14-10-2018 IPR022967 RNA-binding domain, S1 GYO_2025 f86ce88d7b808dc104977c951c596939 705 Gene3D G3DSA:2.40.50.140 623 694 5.7E-26 T 14-10-2018 GYO_2025 f86ce88d7b808dc104977c951c596939 705 Pfam PF03725 3' exoribonuclease family, domain 2 147 210 4.0E-18 T 14-10-2018 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 GYO_2025 f86ce88d7b808dc104977c951c596939 705 Pfam PF03725 3' exoribonuclease family, domain 2 460 530 9.1E-8 T 14-10-2018 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 GYO_2025 f86ce88d7b808dc104977c951c596939 705 SUPERFAMILY SSF54211 7 144 5.06E-49 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold GYO_2025 f86ce88d7b808dc104977c951c596939 705 SUPERFAMILY SSF55666 145 236 6.68E-32 T 14-10-2018 IPR036345 Exoribonuclease, PH domain 2 superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 GYO_2025 f86ce88d7b808dc104977c951c596939 705 Gene3D G3DSA:3.30.230.70 1 230 3.4E-85 T 14-10-2018 IPR027408 PNPase/RNase PH domain superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 GYO_1428 24ae0df3af069adf2b79ef4aeb56b75e 1030 Hamap MF_01210_B Carbamoyl-phosphate synthase large chain [carB]. 1 1017 12.552 T 14-10-2018 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 GYO_1428 24ae0df3af069adf2b79ef4aeb56b75e 1030 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 832 839 - T 14-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 GYO_1428 24ae0df3af069adf2b79ef4aeb56b75e 1030 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 296 303 - T 14-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 GYO_1428 24ae0df3af069adf2b79ef4aeb56b75e 1030 SUPERFAMILY SSF52440 1 127 4.75E-47 T 14-10-2018 IPR016185 Pre-ATP-grasp domain superfamily GYO_1428 24ae0df3af069adf2b79ef4aeb56b75e 1030 SMART SM01096 420 542 6.8E-63 T 14-10-2018 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 GYO_1428 24ae0df3af069adf2b79ef4aeb56b75e 1030 Gene3D G3DSA:3.30.470.20 119 401 1.5E-121 T 14-10-2018 GYO_1428 24ae0df3af069adf2b79ef4aeb56b75e 1030 SUPERFAMILY SSF56059 128 399 5.3E-107 T 14-10-2018 GYO_1428 24ae0df3af069adf2b79ef4aeb56b75e 1030 SUPERFAMILY SSF48108 394 547 3.53E-46 T 14-10-2018 IPR036897 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain superfamily KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 GYO_1428 24ae0df3af069adf2b79ef4aeb56b75e 1030 Gene3D G3DSA:1.10.1030.10 414 548 9.1E-45 T 14-10-2018 IPR036897 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain superfamily KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 GYO_1428 24ae0df3af069adf2b79ef4aeb56b75e 1030 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 164 178 - T 14-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 GYO_1428 24ae0df3af069adf2b79ef4aeb56b75e 1030 SUPERFAMILY SSF56059 670 923 5.83E-79 T 14-10-2018 GYO_1428 24ae0df3af069adf2b79ef4aeb56b75e 1030 TIGRFAM TIGR01369 CPSaseII_lrg: carbamoyl-phosphate synthase, large subunit 2 971 0.0 T 14-10-2018 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 GYO_1428 24ae0df3af069adf2b79ef4aeb56b75e 1030 Pfam PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain 426 542 1.2E-41 T 14-10-2018 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 GYO_1428 24ae0df3af069adf2b79ef4aeb56b75e 1030 Gene3D G3DSA:3.40.50.20 551 659 5.9E-43 T 14-10-2018 GYO_1428 24ae0df3af069adf2b79ef4aeb56b75e 1030 SUPERFAMILY SSF52440 554 672 1.06E-44 T 14-10-2018 IPR016185 Pre-ATP-grasp domain superfamily GYO_1428 24ae0df3af069adf2b79ef4aeb56b75e 1030 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 204 223 2.9E-61 T 14-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 GYO_1428 24ae0df3af069adf2b79ef4aeb56b75e 1030 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 19 33 2.9E-61 T 14-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 GYO_1428 24ae0df3af069adf2b79ef4aeb56b75e 1030 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 378 396 2.9E-61 T 14-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 GYO_1428 24ae0df3af069adf2b79ef4aeb56b75e 1030 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 48 58 2.9E-61 T 14-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 GYO_1428 24ae0df3af069adf2b79ef4aeb56b75e 1030 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 296 325 2.9E-61 T 14-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 GYO_1428 24ae0df3af069adf2b79ef4aeb56b75e 1030 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 168 180 2.9E-61 T 14-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 GYO_1428 24ae0df3af069adf2b79ef4aeb56b75e 1030 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 239 256 2.9E-61 T 14-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 GYO_1428 24ae0df3af069adf2b79ef4aeb56b75e 1030 Gene3D G3DSA:3.40.50.20 1 116 1.8E-46 T 14-10-2018 GYO_1428 24ae0df3af069adf2b79ef4aeb56b75e 1030 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 670 868 4.6E-34 T 14-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 GYO_1428 24ae0df3af069adf2b79ef4aeb56b75e 1030 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 128 333 4.7E-83 T 14-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 GYO_1428 24ae0df3af069adf2b79ef4aeb56b75e 1030 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 706 720 - T 14-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 GYO_1428 24ae0df3af069adf2b79ef4aeb56b75e 1030 Gene3D G3DSA:3.30.470.20 664 922 7.0E-83 T 14-10-2018 GYO_1428 24ae0df3af069adf2b79ef4aeb56b75e 1030 Gene3D G3DSA:3.30.1490.20 683 750 7.0E-83 T 14-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 GYO_2345 8b1158c14aecf888088967d92b083b6f 204 SUPERFAMILY SSF143597 15 200 1.83E-48 T 14-10-2018 IPR036888 DNA integrity scanning protein, DisA, N-terminal domain superfamily GYO_2345 8b1158c14aecf888088967d92b083b6f 204 Hamap MF_00838 Diadenylate cyclase [dacB]. 15 201 35.733 T 14-10-2018 IPR034693 Diadenylate cyclase CdaS GO:0004016|GO:0006171 GYO_2345 8b1158c14aecf888088967d92b083b6f 204 Pfam PF10372 Bacterial membrane-spanning protein N-terminus 3 70 7.2E-25 T 14-10-2018 IPR019457 Uncharacterised domain YojJ, N-terminal GYO_2345 8b1158c14aecf888088967d92b083b6f 204 Gene3D G3DSA:1.10.287.770 2 68 9.5E-14 T 14-10-2018 GYO_2345 8b1158c14aecf888088967d92b083b6f 204 PIRSF PIRSF004793 1 204 2.2E-65 T 14-10-2018 IPR014046 Diadenylate cyclase GO:0004016|GO:0006171 GYO_2345 8b1158c14aecf888088967d92b083b6f 204 Pfam PF02457 DisA bacterial checkpoint controller nucleotide-binding 79 195 1.2E-38 T 14-10-2018 IPR003390 DNA integrity scanning protein, DisA, N-terminal GYO_2345 8b1158c14aecf888088967d92b083b6f 204 Gene3D G3DSA:3.40.1700.10 69 204 4.5E-48 T 14-10-2018 IPR036888 DNA integrity scanning protein, DisA, N-terminal domain superfamily GYO_3208 cbd9084a461311ab18a22585b2650a50 269 TIGRFAM TIGR01856 hisJ_fam: histidinol phosphate phosphatase, HisJ family 4 265 3.0E-94 T 14-10-2018 IPR010140 Histidinol phosphate phosphatase, HisJ GO:0000105|GO:0004401 KEGG: 00340+3.1.3.15 GYO_3208 cbd9084a461311ab18a22585b2650a50 269 Pfam PF13263 PHP-associated 238 264 1.4E-5 T 14-10-2018 GYO_3208 cbd9084a461311ab18a22585b2650a50 269 Pfam PF02811 PHP domain 5 161 1.3E-12 T 14-10-2018 IPR004013 PHP domain GO:0003824 GYO_3208 cbd9084a461311ab18a22585b2650a50 269 SUPERFAMILY SSF89550 4 263 2.88E-37 T 14-10-2018 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 GYO_3208 cbd9084a461311ab18a22585b2650a50 269 Gene3D G3DSA:3.20.20.140 2 268 1.5E-65 T 14-10-2018 GYO_2394 752c83ff5739a3f6e214dadb0eaeb46e 445 PIRSF PIRSF006603 1 445 9.6E-142 T 14-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 GYO_2394 752c83ff5739a3f6e214dadb0eaeb46e 445 Pfam PF01554 MatE 21 182 2.4E-36 T 14-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 GYO_2394 752c83ff5739a3f6e214dadb0eaeb46e 445 Pfam PF01554 MatE 241 401 2.2E-35 T 14-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 GYO_2394 752c83ff5739a3f6e214dadb0eaeb46e 445 TIGRFAM TIGR00797 matE: MATE efflux family protein 21 412 1.9E-73 T 14-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 GYO_2207 c8c67b0855b078cf856593b48927dbc7 181 Pfam PF16800 IseA DL-endopeptidase inhibitor 27 179 1.3E-56 T 14-10-2018 IPR031841 DL-endopeptidase inhibitor IseA GYO_2207 c8c67b0855b078cf856593b48927dbc7 181 Gene3D G3DSA:3.10.450.420 23 181 3.9E-61 T 14-10-2018 GYO_1939 449e3a2482ac01eccbe0bfdfd445a1a1 333 Pfam PF02504 Fatty acid synthesis protein 1 319 2.5E-138 T 14-10-2018 IPR003664 Fatty acid synthesis PlsX protein GO:0003824|GO:0006633|GO:0016747 GYO_1939 449e3a2482ac01eccbe0bfdfd445a1a1 333 Hamap MF_00019 Phosphate acyltransferase [plsX]. 1 333 151.064 T 14-10-2018 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 GYO_1939 449e3a2482ac01eccbe0bfdfd445a1a1 333 SUPERFAMILY SSF53659 1 328 2.71E-106 T 14-10-2018 GYO_1939 449e3a2482ac01eccbe0bfdfd445a1a1 333 PIRSF PIRSF002465 1 333 2.4E-130 T 14-10-2018 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 GYO_1939 449e3a2482ac01eccbe0bfdfd445a1a1 333 TIGRFAM TIGR00182 plsX: fatty acid/phospholipid synthesis protein PlsX 1 330 2.3E-154 T 14-10-2018 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 GYO_1939 449e3a2482ac01eccbe0bfdfd445a1a1 333 Gene3D G3DSA:3.40.718.10 1 333 4.9E-146 T 14-10-2018 GYO_3106 ccae1da0c6ef5f62709b093a309c81bf 570 Pfam PF14520 Helix-hairpin-helix domain 90 144 7.2E-7 T 14-10-2018 GYO_3106 ccae1da0c6ef5f62709b093a309c81bf 570 Gene3D G3DSA:3.30.460.10 152 258 2.3E-22 T 14-10-2018 GYO_3106 ccae1da0c6ef5f62709b093a309c81bf 570 SUPERFAMILY SSF89550 334 569 4.05E-54 T 14-10-2018 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 GYO_3106 ccae1da0c6ef5f62709b093a309c81bf 570 Pfam PF02811 PHP domain 337 513 2.4E-7 T 14-10-2018 IPR004013 PHP domain GO:0003824 GYO_3106 ccae1da0c6ef5f62709b093a309c81bf 570 PIRSF PIRSF005047 1 570 7.3E-241 T 14-10-2018 IPR022311 Uncharacterised conserved protein UCP005047, YshC KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 GYO_3106 ccae1da0c6ef5f62709b093a309c81bf 570 SUPERFAMILY SSF47802 1 81 7.06E-20 T 14-10-2018 IPR027421 DNA polymerase lambda lyase domain superfamily GYO_3106 ccae1da0c6ef5f62709b093a309c81bf 570 Gene3D G3DSA:1.10.150.20 83 147 5.9E-20 T 14-10-2018 GYO_3106 ccae1da0c6ef5f62709b093a309c81bf 570 SMART SM00278 48 67 87.0 T 14-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 GYO_3106 ccae1da0c6ef5f62709b093a309c81bf 570 SMART SM00278 123 142 100.0 T 14-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 GYO_3106 ccae1da0c6ef5f62709b093a309c81bf 570 SMART SM00278 88 107 32.0 T 14-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 GYO_3106 ccae1da0c6ef5f62709b093a309c81bf 570 SUPERFAMILY SSF81301 152 314 9.16E-43 T 14-10-2018 GYO_3106 ccae1da0c6ef5f62709b093a309c81bf 570 Gene3D G3DSA:1.10.150.110 1 82 1.8E-18 T 14-10-2018 IPR027421 DNA polymerase lambda lyase domain superfamily GYO_3106 ccae1da0c6ef5f62709b093a309c81bf 570 Pfam PF14791 DNA polymerase beta thumb 253 314 1.4E-17 T 14-10-2018 IPR029398 DNA polymerase beta, thumb domain GYO_3106 ccae1da0c6ef5f62709b093a309c81bf 570 Pfam PF14716 Helix-hairpin-helix domain 4 68 1.3E-16 T 14-10-2018 IPR010996 DNA polymerase beta-like, N-terminal domain GYO_3106 ccae1da0c6ef5f62709b093a309c81bf 570 SMART SM00483 1 314 3.1E-121 T 14-10-2018 IPR002054 DNA-directed DNA polymerase X GO:0003677|GO:0003887 GYO_3106 ccae1da0c6ef5f62709b093a309c81bf 570 SMART SM00481 336 415 9.6E-22 T 14-10-2018 IPR003141 Polymerase/histidinol phosphatase, N-terminal GYO_3106 ccae1da0c6ef5f62709b093a309c81bf 570 Gene3D G3DSA:3.30.210.10 259 323 3.4E-16 T 14-10-2018 IPR037160 DNA polymerase, thumb domain superfamily GYO_3106 ccae1da0c6ef5f62709b093a309c81bf 570 Gene3D G3DSA:3.20.20.140 324 570 1.9E-76 T 14-10-2018 GYO_4257 663bb5e3be60674e7859f5ea7dc4e4a3 442 Gene3D G3DSA:3.90.110.10 171 442 1.1E-106 T 14-10-2018 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 GYO_4257 663bb5e3be60674e7859f5ea7dc4e4a3 442 Pfam PF02056 Family 4 glycosyl hydrolase 6 187 2.3E-77 T 14-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 GYO_4257 663bb5e3be60674e7859f5ea7dc4e4a3 442 ProSitePatterns PS01324 Glycosyl hydrolases family 4 signature. 141 172 - T 14-10-2018 IPR019802 Glycoside hydrolase, family 4, conserved site GO:0004553|GO:0005975 GYO_4257 663bb5e3be60674e7859f5ea7dc4e4a3 442 PRINTS PR00732 Glycosyl hydrolase family 4 signature 77 93 4.7E-55 T 14-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 GYO_4257 663bb5e3be60674e7859f5ea7dc4e4a3 442 PRINTS PR00732 Glycosyl hydrolase family 4 signature 98 111 4.7E-55 T 14-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 GYO_4257 663bb5e3be60674e7859f5ea7dc4e4a3 442 PRINTS PR00732 Glycosyl hydrolase family 4 signature 6 21 4.7E-55 T 14-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 GYO_4257 663bb5e3be60674e7859f5ea7dc4e4a3 442 PRINTS PR00732 Glycosyl hydrolase family 4 signature 141 158 4.7E-55 T 14-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 GYO_4257 663bb5e3be60674e7859f5ea7dc4e4a3 442 PRINTS PR00732 Glycosyl hydrolase family 4 signature 112 132 4.7E-55 T 14-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 GYO_4257 663bb5e3be60674e7859f5ea7dc4e4a3 442 PRINTS PR00732 Glycosyl hydrolase family 4 signature 167 178 4.7E-55 T 14-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 GYO_4257 663bb5e3be60674e7859f5ea7dc4e4a3 442 PRINTS PR00732 Glycosyl hydrolase family 4 signature 193 205 4.7E-55 T 14-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 GYO_4257 663bb5e3be60674e7859f5ea7dc4e4a3 442 SUPERFAMILY SSF51735 4 168 4.76E-57 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily GYO_4257 663bb5e3be60674e7859f5ea7dc4e4a3 442 Pfam PF11975 Family 4 glycosyl hydrolase C-terminal domain 197 412 1.2E-50 T 14-10-2018 IPR022616 Glycosyl hydrolase, family 4, C-terminal GO:0004553 GYO_4257 663bb5e3be60674e7859f5ea7dc4e4a3 442 SUPERFAMILY SSF56327 173 440 3.01E-100 T 14-10-2018 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 GYO_4257 663bb5e3be60674e7859f5ea7dc4e4a3 442 Gene3D G3DSA:3.40.50.720 1 170 3.9E-73 T 14-10-2018 GYO_2974 05eae9155b06509fdd5ffe25f8224833 422 ProSitePatterns PS01276 Peptidase family U32 signature. 179 197 - T 14-10-2018 IPR001539 Peptidase U32 GO:0006508|GO:0008233 GYO_2974 05eae9155b06509fdd5ffe25f8224833 422 Pfam PF16325 Peptidase family U32 C-terminal domain 339 419 1.0E-25 T 14-10-2018 IPR032525 Peptidase family U32, C-terminal GYO_2974 05eae9155b06509fdd5ffe25f8224833 422 Pfam PF01136 Peptidase family U32 93 323 1.9E-86 T 14-10-2018 IPR001539 Peptidase U32 GO:0006508|GO:0008233 GYO_2974 05eae9155b06509fdd5ffe25f8224833 422 Gene3D G3DSA:2.40.30.10 334 421 1.2E-36 T 14-10-2018 GYO_2536 3a546f2b324d6f098354acef38ba2230 82 Gene3D G3DSA:3.30.70.20 2 82 3.0E-35 T 14-10-2018 GYO_2536 3a546f2b324d6f098354acef38ba2230 82 Pfam PF13370 4Fe-4S single cluster domain of Ferredoxin I 7 69 7.4E-21 T 14-10-2018 GYO_2536 3a546f2b324d6f098354acef38ba2230 82 PRINTS PR00352 3Fe-4S ferredoxin signature 55 67 5.4E-8 T 14-10-2018 IPR001080 3Fe-4S ferredoxin GO:0005506|GO:0009055 GYO_2536 3a546f2b324d6f098354acef38ba2230 82 PRINTS PR00352 3Fe-4S ferredoxin signature 7 18 5.4E-8 T 14-10-2018 IPR001080 3Fe-4S ferredoxin GO:0005506|GO:0009055 GYO_2536 3a546f2b324d6f098354acef38ba2230 82 PRINTS PR00352 3Fe-4S ferredoxin signature 18 28 5.4E-8 T 14-10-2018 IPR001080 3Fe-4S ferredoxin GO:0005506|GO:0009055 GYO_2536 3a546f2b324d6f098354acef38ba2230 82 SUPERFAMILY SSF54862 4 73 2.02E-13 T 14-10-2018 GYO_0894 2267badc8b1be60d9bc34f8cf3a4dc3b 737 SMART SM00460 476 551 5.0E-28 T 14-10-2018 IPR002931 Transglutaminase-like GYO_0894 2267badc8b1be60d9bc34f8cf3a4dc3b 737 Pfam PF01841 Transglutaminase-like superfamily 426 549 2.1E-26 T 14-10-2018 IPR002931 Transglutaminase-like GYO_0894 2267badc8b1be60d9bc34f8cf3a4dc3b 737 Gene3D G3DSA:3.10.620.30 375 579 3.3E-25 T 14-10-2018 GYO_0894 2267badc8b1be60d9bc34f8cf3a4dc3b 737 Pfam PF13559 Domain of unknown function (DUF4129) 663 729 1.7E-8 T 14-10-2018 IPR025403 Domain of unknown function DUF4129 GYO_0894 2267badc8b1be60d9bc34f8cf3a4dc3b 737 SUPERFAMILY SSF54001 407 572 1.82E-46 T 14-10-2018 IPR038765 Papain-like cysteine peptidase superfamily GYO_3563 1beffb7c14d0ff5d9369903b8bb0be4d 374 Gene3D G3DSA:3.50.50.60 5 353 8.7E-81 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily GYO_3563 1beffb7c14d0ff5d9369903b8bb0be4d 374 Gene3D G3DSA:3.30.9.10 88 312 8.7E-81 T 14-10-2018 GYO_3563 1beffb7c14d0ff5d9369903b8bb0be4d 374 Pfam PF01266 FAD dependent oxidoreductase 4 352 8.6E-55 T 14-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 GYO_3563 1beffb7c14d0ff5d9369903b8bb0be4d 374 SUPERFAMILY SSF51905 2 367 1.1E-45 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily GYO_3563 1beffb7c14d0ff5d9369903b8bb0be4d 374 SUPERFAMILY SSF54373 224 313 2.75E-13 T 14-10-2018 GYO_2119 25bcced4c44bb16ca4bb1255a696e485 468 ProSitePatterns PS00217 Sugar transport proteins signature 2. 110 135 - T 14-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 GYO_2119 25bcced4c44bb16ca4bb1255a696e485 468 SUPERFAMILY SSF103473 5 450 1.96E-78 T 14-10-2018 IPR036259 MFS transporter superfamily GYO_2119 25bcced4c44bb16ca4bb1255a696e485 468 TIGRFAM TIGR00879 SP: MFS transporter, sugar porter (SP) family 10 448 1.5E-110 T 14-10-2018 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022857|GO:0055085 Reactome: R-HSA-189200 GYO_2119 25bcced4c44bb16ca4bb1255a696e485 468 Gene3D G3DSA:1.20.1250.20 3 456 7.8E-131 T 14-10-2018 GYO_2119 25bcced4c44bb16ca4bb1255a696e485 468 Pfam PF00083 Sugar (and other) transporter 13 452 7.5E-114 T 14-10-2018 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 GYO_2119 25bcced4c44bb16ca4bb1255a696e485 468 PRINTS PR00171 Sugar transporter signature 105 124 1.5E-23 T 14-10-2018 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022857|GO:0055085 Reactome: R-HSA-189200 GYO_2119 25bcced4c44bb16ca4bb1255a696e485 468 PRINTS PR00171 Sugar transporter signature 264 274 1.5E-23 T 14-10-2018 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022857|GO:0055085 Reactome: R-HSA-189200 GYO_2119 25bcced4c44bb16ca4bb1255a696e485 468 PRINTS PR00171 Sugar transporter signature 353 374 1.5E-23 T 14-10-2018 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022857|GO:0055085 Reactome: R-HSA-189200 GYO_2119 25bcced4c44bb16ca4bb1255a696e485 468 PRINTS PR00171 Sugar transporter signature 376 388 1.5E-23 T 14-10-2018 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022857|GO:0055085 Reactome: R-HSA-189200 GYO_2119 25bcced4c44bb16ca4bb1255a696e485 468 PRINTS PR00171 Sugar transporter signature 20 30 1.5E-23 T 14-10-2018 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022857|GO:0055085 Reactome: R-HSA-189200 GYO_3001 95f74b8ecb71b3e576d638eccb77d06b 170 Gene3D G3DSA:3.40.50.2020 1 170 8.2E-60 T 14-10-2018 GYO_3001 95f74b8ecb71b3e576d638eccb77d06b 170 Hamap MF_00004 Adenine phosphoribosyltransferase [apt]. 3 170 38.792 T 14-10-2018 IPR005764 Adenine phosphoribosyl transferase GO:0003999|GO:0005737|GO:0006168 KEGG: 00230+2.4.2.7|MetaCyc: PWY-6605|MetaCyc: PWY-6610|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-6798695|Reactome: R-HSA-74217 GYO_3001 95f74b8ecb71b3e576d638eccb77d06b 170 Pfam PF00156 Phosphoribosyl transferase domain 35 151 6.1E-16 T 14-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 GYO_3001 95f74b8ecb71b3e576d638eccb77d06b 170 SUPERFAMILY SSF53271 2 164 2.56E-50 T 14-10-2018 IPR029057 Phosphoribosyltransferase-like GYO_3001 95f74b8ecb71b3e576d638eccb77d06b 170 TIGRFAM TIGR01090 apt: adenine phosphoribosyltransferase 3 170 4.2E-72 T 14-10-2018 IPR005764 Adenine phosphoribosyl transferase GO:0003999|GO:0005737|GO:0006168 KEGG: 00230+2.4.2.7|MetaCyc: PWY-6605|MetaCyc: PWY-6610|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-6798695|Reactome: R-HSA-74217 GYO_4159 62edfcac2578feec94d3c63e4939a806 235 Gene3D G3DSA:2.60.120.10 11 225 1.6E-106 T 14-10-2018 IPR014710 RmlC-like jelly roll fold GYO_4159 62edfcac2578feec94d3c63e4939a806 235 Pfam PF07883 Cupin domain 41 106 1.5E-10 T 14-10-2018 IPR013096 Cupin 2, conserved barrel GYO_4159 62edfcac2578feec94d3c63e4939a806 235 Pfam PF07883 Cupin domain 151 216 5.5E-10 T 14-10-2018 IPR013096 Cupin 2, conserved barrel GYO_4159 62edfcac2578feec94d3c63e4939a806 235 SUPERFAMILY SSF51182 3 224 1.72E-33 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily GYO_4159 62edfcac2578feec94d3c63e4939a806 235 Gene3D G3DSA:2.60.120.10 15 124 1.6E-106 T 14-10-2018 IPR014710 RmlC-like jelly roll fold GYO_3351 7494a38f32f4f18202cb29d32926ad10 343 Gene3D G3DSA:2.160.10.10 238 337 5.3E-28 T 14-10-2018 GYO_3351 7494a38f32f4f18202cb29d32926ad10 343 Pfam PF00483 Nucleotidyl transferase 19 148 6.4E-7 T 14-10-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 GYO_3351 7494a38f32f4f18202cb29d32926ad10 343 SUPERFAMILY SSF53448 19 302 9.56E-31 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases GYO_3351 7494a38f32f4f18202cb29d32926ad10 343 SUPERFAMILY SSF51161 250 319 4.12E-11 T 14-10-2018 IPR011004 Trimeric LpxA-like superfamily GYO_3351 7494a38f32f4f18202cb29d32926ad10 343 Gene3D G3DSA:3.90.550.10 155 237 3.4E-6 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases GYO_3351 7494a38f32f4f18202cb29d32926ad10 343 Gene3D G3DSA:3.90.550.10 3 154 2.5E-18 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases GYO_3351 7494a38f32f4f18202cb29d32926ad10 343 TIGRFAM TIGR02092 glgD: glucose-1-phosphate adenylyltransferase, GlgD subunit 157 336 3.1E-79 T 14-10-2018 IPR011832 Glucose-1-phosphate adenylyltransferase, GlgD subunit GO:0005978 GYO_3745 fe46c69c7ea0cdc3a66431de588beeca 687 Pfam PF08532 Beta-galactosidase trimerisation domain 412 617 2.4E-73 T 14-10-2018 IPR013738 Beta-galactosidase trimerisation GO:0004565|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 GYO_3745 fe46c69c7ea0cdc3a66431de588beeca 687 Pfam PF02449 Beta-galactosidase 21 401 2.5E-151 T 14-10-2018 IPR013529 Glycoside hydrolase, family 42, N-terminal GO:0004565|GO:0005975|GO:0009341 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 GYO_3745 fe46c69c7ea0cdc3a66431de588beeca 687 PIRSF PIRSF001084 9 686 1.3E-233 T 14-10-2018 IPR003476 Glycoside hydrolase, family 42 GO:0004565|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 GYO_3745 fe46c69c7ea0cdc3a66431de588beeca 687 SUPERFAMILY SSF52317 410 617 2.14E-54 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like GYO_3745 fe46c69c7ea0cdc3a66431de588beeca 687 Pfam PF08533 Beta-galactosidase C-terminal domain 628 684 3.1E-18 T 14-10-2018 IPR013739 Beta-galactosidase C-terminal GO:0004565|GO:0006012 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 GYO_3745 fe46c69c7ea0cdc3a66431de588beeca 687 Gene3D G3DSA:3.20.20.80 2 408 1.4E-142 T 14-10-2018 GYO_3745 fe46c69c7ea0cdc3a66431de588beeca 687 Gene3D G3DSA:2.60.40.1180 626 685 9.1E-23 T 14-10-2018 IPR013780 Glycosyl hydrolase, all-beta GYO_3745 fe46c69c7ea0cdc3a66431de588beeca 687 Gene3D G3DSA:3.40.50.880 409 625 2.2E-63 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like GYO_3745 fe46c69c7ea0cdc3a66431de588beeca 687 SUPERFAMILY SSF51445 14 382 5.68E-109 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily GYO_2707 8a258403e3ae504c0feaf0a9edbc1039 146 SUPERFAMILY SSF52304 4 143 9.16E-58 T 14-10-2018 IPR036441 Dehydroquinase, class II superfamily GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 GYO_2707 8a258403e3ae504c0feaf0a9edbc1039 146 Pfam PF01220 Dehydroquinase class II 4 139 3.3E-59 T 14-10-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 GYO_2707 8a258403e3ae504c0feaf0a9edbc1039 146 Gene3D G3DSA:3.40.50.9100 2 144 1.1E-63 T 14-10-2018 IPR036441 Dehydroquinase, class II superfamily GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 GYO_2707 8a258403e3ae504c0feaf0a9edbc1039 146 PIRSF PIRSF001399 1 145 1.1E-61 T 14-10-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 GYO_2707 8a258403e3ae504c0feaf0a9edbc1039 146 Hamap MF_00169 3-dehydroquinate dehydratase [aroQ]. 1 146 65.001 T 14-10-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 GYO_2707 8a258403e3ae504c0feaf0a9edbc1039 146 ProDom PD004527 LYASE II 3-DEHYDROQUINATE BIOSYNTHESIS DEHYDRATASE TYPE 3-DEHYDROQUINASE DHQASE AMINO AROMATIC 4 142 1.0E-74 T 14-10-2018 GYO_2707 8a258403e3ae504c0feaf0a9edbc1039 146 TIGRFAM TIGR01088 aroQ: 3-dehydroquinate dehydratase, type II 4 142 1.0E-66 T 14-10-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 GYO_2707 8a258403e3ae504c0feaf0a9edbc1039 146 ProSitePatterns PS01029 Dehydroquinase class II signature. 7 24 - T 14-10-2018 IPR018509 Dehydroquinase, class II, conserved site GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 GYO_3895 34adb7bba1dba94ce73c1a88e7056588 217 Pfam PF09186 Domain of unknown function (DUF1949) 141 194 6.4E-15 T 14-10-2018 IPR015269 Uncharacterised domain UPF0029, Impact, C-terminal GYO_3895 34adb7bba1dba94ce73c1a88e7056588 217 SUPERFAMILY SSF54980 135 198 3.45E-9 T 14-10-2018 IPR035647 EF-G domain III/V-like GYO_3895 34adb7bba1dba94ce73c1a88e7056588 217 Pfam PF01205 Uncharacterized protein family UPF0029 20 123 9.2E-34 T 14-10-2018 IPR001498 Impact, N-terminal GYO_3895 34adb7bba1dba94ce73c1a88e7056588 217 Gene3D G3DSA:3.30.230.30 1 133 1.4E-53 T 14-10-2018 IPR036956 Impact, N-terminal domain superfamily GYO_3895 34adb7bba1dba94ce73c1a88e7056588 217 TIGRFAM TIGR00257 IMPACT_YIGZ: uncharacterized protein, YigZ family 1 198 1.3E-88 T 14-10-2018 IPR015796 Impact family, bacterial/archaeal GYO_3895 34adb7bba1dba94ce73c1a88e7056588 217 ProSitePatterns PS00910 Uncharacterized protein family UPF0029 signature. 79 108 - T 14-10-2018 IPR020569 Uncharacterised protein family UPF0029, Impact, conserved site GYO_3895 34adb7bba1dba94ce73c1a88e7056588 217 SUPERFAMILY SSF54211 1 131 6.45E-46 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold GYO_1916 d8e3e35f73cddf821ba373ab14d96347 89 ProDom PD063023 UPF0296 YLZA BA4010/GBAA4010/BAS3723 BLI01788/BL02292 BT9727_3613 BC3870 TM1690 CBDBA43 SYC0519_C BCE33L3631 5 78 2.0E-36 T 14-10-2018 IPR007169 Extracellular matrix regulatory protein A GYO_1916 d8e3e35f73cddf821ba373ab14d96347 89 Hamap MF_01503 UPF0296 protein . 3 86 29.068 T 14-10-2018 IPR007169 Extracellular matrix regulatory protein A GYO_1916 d8e3e35f73cddf821ba373ab14d96347 89 Pfam PF04025 Domain of unknown function (DUF370) 5 77 2.9E-36 T 14-10-2018 IPR007169 Extracellular matrix regulatory protein A GYO_1815 d5f945cc3b6db95a7ec1381786541004 178 SUPERFAMILY SSF88946 8 88 1.26E-21 T 14-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 GYO_1815 d5f945cc3b6db95a7ec1381786541004 178 Gene3D G3DSA:1.10.1740.10 3 78 2.9E-22 T 14-10-2018 GYO_1815 d5f945cc3b6db95a7ec1381786541004 178 SUPERFAMILY SSF88659 93 171 1.1E-15 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like GYO_1815 d5f945cc3b6db95a7ec1381786541004 178 Pfam PF04542 Sigma-70 region 2 15 80 8.1E-16 T 14-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 GYO_1815 d5f945cc3b6db95a7ec1381786541004 178 Pfam PF08281 Sigma-70, region 4 114 165 2.1E-14 T 14-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 GYO_1815 d5f945cc3b6db95a7ec1381786541004 178 TIGRFAM TIGR02950 SigM_subfam: RNA polymerase sigma factor, SigM family 11 169 2.5E-55 T 14-10-2018 IPR014296 RNA polymerase sigma-M, bacillaceae GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 GYO_1815 d5f945cc3b6db95a7ec1381786541004 178 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 11 168 3.4E-30 T 14-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 GYO_1815 d5f945cc3b6db95a7ec1381786541004 178 Gene3D G3DSA:1.10.10.10 88 173 1.8E-18 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily GYO_3843 24ac71d129b1cd315e80e6ddb5f18c9c 405 PRINTS PR00359 B-class P450 signature 285 312 8.6E-36 T 14-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 GYO_3843 24ac71d129b1cd315e80e6ddb5f18c9c 405 PRINTS PR00359 B-class P450 signature 313 328 8.6E-36 T 14-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 GYO_3843 24ac71d129b1cd315e80e6ddb5f18c9c 405 PRINTS PR00359 B-class P450 signature 80 91 8.6E-36 T 14-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 GYO_3843 24ac71d129b1cd315e80e6ddb5f18c9c 405 PRINTS PR00359 B-class P450 signature 143 158 8.6E-36 T 14-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 GYO_3843 24ac71d129b1cd315e80e6ddb5f18c9c 405 PRINTS PR00359 B-class P450 signature 187 209 8.6E-36 T 14-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 GYO_3843 24ac71d129b1cd315e80e6ddb5f18c9c 405 PRINTS PR00359 B-class P450 signature 268 279 8.6E-36 T 14-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 GYO_3843 24ac71d129b1cd315e80e6ddb5f18c9c 405 PRINTS PR00359 B-class P450 signature 126 142 8.6E-36 T 14-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 GYO_3843 24ac71d129b1cd315e80e6ddb5f18c9c 405 PRINTS PR00359 B-class P450 signature 353 364 8.6E-36 T 14-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 GYO_3843 24ac71d129b1cd315e80e6ddb5f18c9c 405 PRINTS PR00359 B-class P450 signature 344 353 8.6E-36 T 14-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 GYO_3843 24ac71d129b1cd315e80e6ddb5f18c9c 405 TIGRFAM TIGR04538 P450_cycloAA_1: cytochrome P450, cyclodipeptide synthase-associated 9 403 3.1E-204 T 14-10-2018 IPR030904 Cytochrome P450, CypX GO:0005506|GO:0016491|GO:0020037|GO:0046148|GO:0055114 GYO_3843 24ac71d129b1cd315e80e6ddb5f18c9c 405 Pfam PF00067 Cytochrome P450 17 372 1.1E-34 T 14-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 GYO_3843 24ac71d129b1cd315e80e6ddb5f18c9c 405 SUPERFAMILY SSF48264 13 402 1.31E-81 T 14-10-2018 IPR036396 Cytochrome P450 superfamily GO:0005506|GO:0016705|GO:0020037|GO:0055114 GYO_3843 24ac71d129b1cd315e80e6ddb5f18c9c 405 ProSitePatterns PS00086 Cytochrome P450 cysteine heme-iron ligand signature. 346 355 - T 14-10-2018 IPR017972 Cytochrome P450, conserved site GO:0016705|GO:0055114 GYO_3843 24ac71d129b1cd315e80e6ddb5f18c9c 405 Gene3D G3DSA:1.10.630.10 5 405 5.8E-107 T 14-10-2018 IPR036396 Cytochrome P450 superfamily GO:0005506|GO:0016705|GO:0020037|GO:0055114 GYO_1472 505f6cbca4bd42bd4f3b527e54219502 369 TIGRFAM TIGR02352 thiamin_ThiO: glycine oxidase ThiO 8 349 1.1E-119 T 14-10-2018 IPR012727 Glycine oxidase ThiO GO:0016491|GO:0050660 KEGG: 00730+1.4.3.19|MetaCyc: PWY-7396|MetaCyc: PWY-7806 GYO_1472 505f6cbca4bd42bd4f3b527e54219502 369 Gene3D G3DSA:3.50.50.60 8 345 5.3E-137 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily GYO_1472 505f6cbca4bd42bd4f3b527e54219502 369 Gene3D G3DSA:3.30.9.10 92 305 5.3E-137 T 14-10-2018 GYO_1472 505f6cbca4bd42bd4f3b527e54219502 369 SUPERFAMILY SSF51905 4 364 3.54E-47 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily GYO_1472 505f6cbca4bd42bd4f3b527e54219502 369 Pfam PF01266 FAD dependent oxidoreductase 6 344 2.6E-65 T 14-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 GYO_1472 505f6cbca4bd42bd4f3b527e54219502 369 SUPERFAMILY SSF54373 220 305 4.71E-21 T 14-10-2018 GYO_1492 85c2bf90f40f5a73209a4b1ab3c1d88f 171 SUPERFAMILY SSF55144 1 170 6.63E-37 T 14-10-2018 IPR009097 Cyclic phosphodiesterase GYO_1492 85c2bf90f40f5a73209a4b1ab3c1d88f 171 Pfam PF13563 2'-5' RNA ligase superfamily 11 152 7.6E-21 T 14-10-2018 GYO_1492 85c2bf90f40f5a73209a4b1ab3c1d88f 171 Gene3D G3DSA:3.90.1140.10 1 170 9.7E-44 T 14-10-2018 GYO_1492 85c2bf90f40f5a73209a4b1ab3c1d88f 171 Hamap MF_01444 Putative phosphoesterase . 1 168 39.117 T 14-10-2018 IPR022932 Putative phosphoesterase YjcG GYO_1311 72b5385041c790fcb3a0bd209496c749 191 Pfam PF00440 Bacterial regulatory proteins, tetR family 9 55 1.3E-16 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 GYO_1311 72b5385041c790fcb3a0bd209496c749 191 SUPERFAMILY SSF46689 4 78 2.05E-17 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 GYO_1311 72b5385041c790fcb3a0bd209496c749 191 ProSitePatterns PS01081 TetR-type HTH domain signature. 21 51 - T 14-10-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site GYO_1311 72b5385041c790fcb3a0bd209496c749 191 SUPERFAMILY SSF48498 77 190 2.56E-13 T 14-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily GYO_1311 72b5385041c790fcb3a0bd209496c749 191 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 30 53 1.1E-8 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 GYO_1311 72b5385041c790fcb3a0bd209496c749 191 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 9 22 1.1E-8 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 GYO_1311 72b5385041c790fcb3a0bd209496c749 191 Gene3D G3DSA:1.10.357.10 1 189 9.1E-39 T 14-10-2018 GYO_4331 be1fc579de5baa140f5102b9bfd936c0 312 SUPERFAMILY SSF103481 196 297 1.96E-11 T 14-10-2018 GYO_4331 be1fc579de5baa140f5102b9bfd936c0 312 SUPERFAMILY SSF103481 48 148 2.09E-12 T 14-10-2018 GYO_4331 be1fc579de5baa140f5102b9bfd936c0 312 Pfam PF00892 EamA-like transporter family 16 147 3.0E-19 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 GYO_4331 be1fc579de5baa140f5102b9bfd936c0 312 Pfam PF00892 EamA-like transporter family 161 292 7.5E-24 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 GYO_2749 831714ce9de5696711dd08d6701b908e 321 Gene3D G3DSA:3.30.420.40 8 308 6.0E-101 T 14-10-2018 GYO_2749 831714ce9de5696711dd08d6701b908e 321 SUPERFAMILY SSF53067 6 314 1.6E-70 T 14-10-2018 GYO_2749 831714ce9de5696711dd08d6701b908e 321 TIGRFAM TIGR00744 ROK_glcA_fam: ROK family protein (putative glucokinase) 7 321 1.2E-159 T 14-10-2018 IPR004654 Glucokinase ROK GO:0004340|GO:0005737|GO:0006096|GO:0051156 KEGG: 00010+2.7.1.2|KEGG: 00052+2.7.1.2|KEGG: 00500+2.7.1.2|KEGG: 00520+2.7.1.2|KEGG: 00521+2.7.1.2|KEGG: 00524+2.7.1.2|MetaCyc: PWY-2722|MetaCyc: PWY-2723|MetaCyc: PWY-5514|MetaCyc: PWY-5661|MetaCyc: PWY-621|MetaCyc: PWY-7238|MetaCyc: PWY-7385 GYO_2749 831714ce9de5696711dd08d6701b908e 321 Gene3D G3DSA:3.30.420.40 128 297 6.0E-101 T 14-10-2018 GYO_2749 831714ce9de5696711dd08d6701b908e 321 ProSitePatterns PS01125 ROK family signature. 137 164 - T 14-10-2018 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 GYO_2749 831714ce9de5696711dd08d6701b908e 321 Pfam PF00480 ROK family 7 313 8.8E-77 T 14-10-2018 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 GYO_1338 d9e2dc2ef6398465b59be5d1e626a8e3 481 ProSitePatterns PS00455 Putative AMP-binding domain signature. 149 160 - T 14-10-2018 IPR020845 AMP-binding, conserved site GYO_1338 d9e2dc2ef6398465b59be5d1e626a8e3 481 SUPERFAMILY SSF56801 2 478 1.18E-113 T 14-10-2018 GYO_1338 d9e2dc2ef6398465b59be5d1e626a8e3 481 Pfam PF00501 AMP-binding enzyme 11 386 3.9E-63 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 GYO_1338 d9e2dc2ef6398465b59be5d1e626a8e3 481 Gene3D G3DSA:3.40.50.12780 1 377 1.4E-80 T 14-10-2018 GYO_1338 d9e2dc2ef6398465b59be5d1e626a8e3 481 Gene3D G3DSA:3.30.300.310 382 480 3.3E-27 T 14-10-2018 GYO_1338 d9e2dc2ef6398465b59be5d1e626a8e3 481 Pfam PF13193 AMP-binding enzyme C-terminal domain 395 466 4.7E-19 T 14-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain GYO_0559 c69f7a5369b1870473f7ed8bf9499d2e 210 SUPERFAMILY SSF51366 3 208 2.36E-40 T 14-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 GYO_0559 c69f7a5369b1870473f7ed8bf9499d2e 210 Pfam PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family 2 202 3.5E-31 T 14-10-2018 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 GYO_0559 c69f7a5369b1870473f7ed8bf9499d2e 210 TIGRFAM TIGR03128 RuMP_HxlA: 3-hexulose-6-phosphate synthase 2 207 1.0E-90 T 14-10-2018 IPR017553 3-hexulose-6-phosphate synthase GO:0005975|GO:0043801 KEGG: 00030+4.1.2.43|KEGG: 00680+4.1.2.43|MetaCyc: PWY-1861|MetaCyc: PWY-7796 GYO_0559 c69f7a5369b1870473f7ed8bf9499d2e 210 SMART SM00934 2 203 2.6E-42 T 14-10-2018 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 GYO_0559 c69f7a5369b1870473f7ed8bf9499d2e 210 Gene3D G3DSA:3.20.20.70 1 209 2.7E-75 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 GYO_2014 6c241ae21f999fc9ac5e2e3d9039a03b 156 SUPERFAMILY SSF75420 3 84 1.44E-27 T 14-10-2018 IPR035956 RimP, N-terminal domain superfamily GYO_2014 6c241ae21f999fc9ac5e2e3d9039a03b 156 SUPERFAMILY SSF74942 85 156 1.83E-21 T 14-10-2018 IPR036847 Ribosome maturation factor RimP, C-terminal domain superfamily GYO_2014 6c241ae21f999fc9ac5e2e3d9039a03b 156 Gene3D G3DSA:3.30.300.70 1 81 1.8E-30 T 14-10-2018 IPR035956 RimP, N-terminal domain superfamily GYO_2014 6c241ae21f999fc9ac5e2e3d9039a03b 156 Gene3D G3DSA:2.30.30.180 88 154 6.0E-26 T 14-10-2018 GYO_2014 6c241ae21f999fc9ac5e2e3d9039a03b 156 Pfam PF02576 RimP N-terminal domain 13 84 8.4E-31 T 14-10-2018 IPR028989 Ribosome maturation factor RimP, N-terminal GYO_2014 6c241ae21f999fc9ac5e2e3d9039a03b 156 Pfam PF17384 RimP C-terminal SH3 domain 87 156 9.4E-23 T 14-10-2018 IPR028998 Ribosome maturation factor RimP, C-terminal GYO_2014 6c241ae21f999fc9ac5e2e3d9039a03b 156 Hamap MF_01077 Ribosome maturation factor RimP [rimP]. 7 156 25.147 T 14-10-2018 IPR003728 Ribosome maturation factor RimP GO:0042274 GYO_0819 8e6397fdc479b440e7c81429d3863892 144 Gene3D G3DSA:1.10.10.10 5 143 5.0E-34 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily GYO_0819 8e6397fdc479b440e7c81429d3863892 144 SUPERFAMILY SSF46785 28 140 6.16E-31 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily GYO_0819 8e6397fdc479b440e7c81429d3863892 144 Pfam PF01047 MarR family 32 89 2.5E-18 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 GYO_0819 8e6397fdc479b440e7c81429d3863892 144 PRINTS PR00598 Bacterial regulatory protein MarR family signature 49 65 5.7E-16 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 GYO_0819 8e6397fdc479b440e7c81429d3863892 144 PRINTS PR00598 Bacterial regulatory protein MarR family signature 85 101 5.7E-16 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 GYO_0819 8e6397fdc479b440e7c81429d3863892 144 PRINTS PR00598 Bacterial regulatory protein MarR family signature 66 81 5.7E-16 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 GYO_0819 8e6397fdc479b440e7c81429d3863892 144 PRINTS PR00598 Bacterial regulatory protein MarR family signature 115 135 5.7E-16 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 GYO_0819 8e6397fdc479b440e7c81429d3863892 144 SMART SM00418 27 107 0.0054 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 GYO_0819 8e6397fdc479b440e7c81429d3863892 144 SMART SM00347 25 125 1.6E-31 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 GYO_3998 cfb05b8ea580e7b834971e4f71d94642 1980 Pfam PF00746 LPXTG cell wall anchor motif 1937 1976 6.2E-7 T 14-10-2018 IPR019948 Gram-positive LPXTG cell wall anchor GYO_3998 cfb05b8ea580e7b834971e4f71d94642 1980 SUPERFAMILY SSF49478 1624 1689 8.24E-7 T 14-10-2018 GYO_3998 cfb05b8ea580e7b834971e4f71d94642 1980 SUPERFAMILY SSF49401 418 554 3.73E-19 T 14-10-2018 IPR008966 Adhesion domain superfamily GYO_3998 cfb05b8ea580e7b834971e4f71d94642 1980 SUPERFAMILY SSF49478 1436 1501 2.24E-7 T 14-10-2018 GYO_3998 cfb05b8ea580e7b834971e4f71d94642 1980 SUPERFAMILY SSF49478 1531 1592 7.06E-6 T 14-10-2018 GYO_3998 cfb05b8ea580e7b834971e4f71d94642 1980 SUPERFAMILY SSF49478 1242 1313 1.18E-5 T 14-10-2018 GYO_3998 cfb05b8ea580e7b834971e4f71d94642 1980 TIGRFAM TIGR01167 LPXTG_anchor: LPXTG cell wall anchor domain 1943 1976 6.5E-7 T 14-10-2018 GYO_3998 cfb05b8ea580e7b834971e4f71d94642 1980 SUPERFAMILY SSF49401 554 688 1.49E-19 T 14-10-2018 IPR008966 Adhesion domain superfamily GYO_3998 cfb05b8ea580e7b834971e4f71d94642 1980 SUPERFAMILY SSF49401 272 415 2.11E-26 T 14-10-2018 IPR008966 Adhesion domain superfamily GYO_3998 cfb05b8ea580e7b834971e4f71d94642 1980 Gene3D G3DSA:2.60.40.1280 39 194 2.0E-8 T 14-10-2018 IPR011252 Fibrogen-binding domain 1 GO:0007155 GYO_3998 cfb05b8ea580e7b834971e4f71d94642 1980 Gene3D G3DSA:2.60.40.1280 265 417 1.9E-23 T 14-10-2018 IPR011252 Fibrogen-binding domain 1 GO:0007155 GYO_3998 cfb05b8ea580e7b834971e4f71d94642 1980 SUPERFAMILY SSF49478 1810 1887 2.12E-6 T 14-10-2018 GYO_3998 cfb05b8ea580e7b834971e4f71d94642 1980 SUPERFAMILY SSF49478 1151 1209 5.49E-8 T 14-10-2018 GYO_3998 cfb05b8ea580e7b834971e4f71d94642 1980 SUPERFAMILY SSF49478 1343 1405 3.53E-6 T 14-10-2018 GYO_3998 cfb05b8ea580e7b834971e4f71d94642 1980 SUPERFAMILY SSF49401 978 1127 2.98E-23 T 14-10-2018 IPR008966 Adhesion domain superfamily GYO_3998 cfb05b8ea580e7b834971e4f71d94642 1980 Gene3D G3DSA:2.60.40.10 1710 1799 3.8E-25 T 14-10-2018 IPR013783 Immunoglobulin-like fold GYO_3998 cfb05b8ea580e7b834971e4f71d94642 1980 Gene3D G3DSA:2.60.40.10 1236 1331 4.4E-22 T 14-10-2018 IPR013783 Immunoglobulin-like fold GYO_3998 cfb05b8ea580e7b834971e4f71d94642 1980 Gene3D G3DSA:2.60.40.10 1520 1613 6.2E-27 T 14-10-2018 IPR013783 Immunoglobulin-like fold GYO_3998 cfb05b8ea580e7b834971e4f71d94642 1980 Gene3D G3DSA:2.60.40.10 1800 1910 6.6E-26 T 14-10-2018 IPR013783 Immunoglobulin-like fold GYO_3998 cfb05b8ea580e7b834971e4f71d94642 1980 Gene3D G3DSA:2.60.40.10 1614 1709 9.9E-27 T 14-10-2018 IPR013783 Immunoglobulin-like fold GYO_3998 cfb05b8ea580e7b834971e4f71d94642 1980 Gene3D G3DSA:2.60.40.10 1426 1519 3.9E-29 T 14-10-2018 IPR013783 Immunoglobulin-like fold GYO_3998 cfb05b8ea580e7b834971e4f71d94642 1980 Gene3D G3DSA:2.60.40.10 1332 1425 2.6E-27 T 14-10-2018 IPR013783 Immunoglobulin-like fold GYO_3998 cfb05b8ea580e7b834971e4f71d94642 1980 Gene3D G3DSA:2.60.40.10 1138 1235 3.4E-21 T 14-10-2018 IPR013783 Immunoglobulin-like fold GYO_3998 cfb05b8ea580e7b834971e4f71d94642 1980 SUPERFAMILY SSF49478 1715 1784 3.65E-7 T 14-10-2018 GYO_3998 cfb05b8ea580e7b834971e4f71d94642 1980 SUPERFAMILY SSF49401 702 829 7.95E-18 T 14-10-2018 IPR008966 Adhesion domain superfamily GYO_3998 cfb05b8ea580e7b834971e4f71d94642 1980 Pfam PF05737 Collagen binding domain 985 1121 1.4E-13 T 14-10-2018 IPR008456 Collagen binding domain GO:0005518 GYO_3998 cfb05b8ea580e7b834971e4f71d94642 1980 Pfam PF05737 Collagen binding domain 704 815 1.3E-6 T 14-10-2018 IPR008456 Collagen binding domain GO:0005518 GYO_3998 cfb05b8ea580e7b834971e4f71d94642 1980 Pfam PF05737 Collagen binding domain 419 545 6.8E-19 T 14-10-2018 IPR008456 Collagen binding domain GO:0005518 GYO_3998 cfb05b8ea580e7b834971e4f71d94642 1980 Pfam PF05737 Collagen binding domain 567 686 6.2E-11 T 14-10-2018 IPR008456 Collagen binding domain GO:0005518 GYO_3998 cfb05b8ea580e7b834971e4f71d94642 1980 Pfam PF05737 Collagen binding domain 837 961 1.7E-14 T 14-10-2018 IPR008456 Collagen binding domain GO:0005518 GYO_3998 cfb05b8ea580e7b834971e4f71d94642 1980 SUPERFAMILY SSF49401 838 974 4.47E-22 T 14-10-2018 IPR008966 Adhesion domain superfamily GYO_3998 cfb05b8ea580e7b834971e4f71d94642 1980 SUPERFAMILY SSF49401 49 186 1.14E-10 T 14-10-2018 IPR008966 Adhesion domain superfamily GYO_3682 138757f2cf4a4ecb3b83f5fd17395802 77 SMART SM00530 12 67 1.2E-8 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 GYO_3682 138757f2cf4a4ecb3b83f5fd17395802 77 SUPERFAMILY SSF47413 11 71 5.63E-11 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 GYO_3682 138757f2cf4a4ecb3b83f5fd17395802 77 Gene3D G3DSA:1.10.260.40 4 70 3.7E-8 T 14-10-2018 GYO_3682 138757f2cf4a4ecb3b83f5fd17395802 77 Pfam PF01381 Helix-turn-helix 16 67 7.5E-12 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 GYO_2326 00dc61c6e007a1ea5f0d316c6276c68a 591 SUPERFAMILY SSF47819 514 586 1.24E-24 T 14-10-2018 IPR010997 HRDC-like superfamily GO:0000166|GO:0003824|GO:0044237 GYO_2326 00dc61c6e007a1ea5f0d316c6276c68a 591 SMART SM00956 405 508 1.4E-41 T 14-10-2018 IPR018982 RQC domain GO:0006260|GO:0006281|GO:0043140 Reactome: R-HSA-3108214|Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473 GYO_2326 00dc61c6e007a1ea5f0d316c6276c68a 591 Gene3D G3DSA:3.40.50.300 203 334 3.9E-38 T 14-10-2018 GYO_2326 00dc61c6e007a1ea5f0d316c6276c68a 591 Pfam PF16124 RecQ zinc-binding 337 397 3.1E-17 T 14-10-2018 IPR032284 ATP-dependent DNA helicase RecQ, zinc-binding domain GYO_2326 00dc61c6e007a1ea5f0d316c6276c68a 591 SUPERFAMILY SSF46785 396 538 1.77E-35 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily GYO_2326 00dc61c6e007a1ea5f0d316c6276c68a 591 Pfam PF09382 RQC domain 402 509 1.1E-30 T 14-10-2018 IPR018982 RQC domain GO:0006260|GO:0006281|GO:0043140 Reactome: R-HSA-3108214|Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473 GYO_2326 00dc61c6e007a1ea5f0d316c6276c68a 591 SMART SM00490 244 325 7.1E-26 T 14-10-2018 IPR001650 Helicase, C-terminal GYO_2326 00dc61c6e007a1ea5f0d316c6276c68a 591 SMART SM00341 513 591 9.8E-25 T 14-10-2018 IPR002121 HRDC domain GO:0003676|GO:0005622 GYO_2326 00dc61c6e007a1ea5f0d316c6276c68a 591 SMART SM00487 14 212 2.6E-30 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain GYO_2326 00dc61c6e007a1ea5f0d316c6276c68a 591 Gene3D G3DSA:1.10.150.80 511 589 1.8E-24 T 14-10-2018 GYO_2326 00dc61c6e007a1ea5f0d316c6276c68a 591 Pfam PF00570 HRDC domain 518 583 1.5E-22 T 14-10-2018 IPR002121 HRDC domain GO:0003676|GO:0005622 GYO_2326 00dc61c6e007a1ea5f0d316c6276c68a 591 Pfam PF00271 Helicase conserved C-terminal domain 217 324 1.1E-16 T 14-10-2018 IPR001650 Helicase, C-terminal GYO_2326 00dc61c6e007a1ea5f0d316c6276c68a 591 Gene3D G3DSA:3.40.50.300 1 202 1.1E-74 T 14-10-2018 GYO_2326 00dc61c6e007a1ea5f0d316c6276c68a 591 Pfam PF00270 DEAD/DEAH box helicase 21 182 8.7E-17 T 14-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 GYO_2326 00dc61c6e007a1ea5f0d316c6276c68a 591 TIGRFAM TIGR01389 recQ: ATP-dependent DNA helicase RecQ 6 586 7.8E-228 T 14-10-2018 IPR006293 DNA helicase, ATP-dependent, RecQ type, bacterial GO:0004003|GO:0006310|GO:0009432 GYO_2326 00dc61c6e007a1ea5f0d316c6276c68a 591 SUPERFAMILY SSF52540 59 347 8.54E-61 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase GYO_2326 00dc61c6e007a1ea5f0d316c6276c68a 591 TIGRFAM TIGR00614 recQ_fam: ATP-dependent DNA helicase, RecQ family 8 457 1.3E-146 T 14-10-2018 IPR004589 DNA helicase, ATP-dependent, RecQ type GO:0006310|GO:0008026 GYO_2326 00dc61c6e007a1ea5f0d316c6276c68a 591 Gene3D G3DSA:1.10.10.10 335 510 3.2E-49 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily GYO_0282 e50fc821cd7eaca4b5f8458fdfdd5f25 151 SUPERFAMILY SSF103084 2 135 7.72E-25 T 14-10-2018 IPR036614 Holliday junction resolvase RusA-like superfamily GO:0000287|GO:0006281|GO:0006310 GYO_0282 e50fc821cd7eaca4b5f8458fdfdd5f25 151 Gene3D G3DSA:3.30.1330.70 10 139 4.2E-11 T 14-10-2018 IPR036614 Holliday junction resolvase RusA-like superfamily GO:0000287|GO:0006281|GO:0006310 GYO_0282 e50fc821cd7eaca4b5f8458fdfdd5f25 151 Pfam PF05866 Endodeoxyribonuclease RusA 8 133 2.1E-34 T 14-10-2018 IPR008822 Holliday junction resolvase RusA-like GO:0000287|GO:0006281|GO:0006310 GYO_0203 e50fc821cd7eaca4b5f8458fdfdd5f25 151 SUPERFAMILY SSF103084 2 135 7.72E-25 T 14-10-2018 IPR036614 Holliday junction resolvase RusA-like superfamily GO:0000287|GO:0006281|GO:0006310 GYO_0203 e50fc821cd7eaca4b5f8458fdfdd5f25 151 Gene3D G3DSA:3.30.1330.70 10 139 4.2E-11 T 14-10-2018 IPR036614 Holliday junction resolvase RusA-like superfamily GO:0000287|GO:0006281|GO:0006310 GYO_0203 e50fc821cd7eaca4b5f8458fdfdd5f25 151 Pfam PF05866 Endodeoxyribonuclease RusA 8 133 2.1E-34 T 14-10-2018 IPR008822 Holliday junction resolvase RusA-like GO:0000287|GO:0006281|GO:0006310 GYO_1615 ca33da0e680b9c9fc3e4ddf0c3ea237c 551 Gene3D G3DSA:3.40.190.10 63 538 2.5E-170 T 14-10-2018 GYO_1615 ca33da0e680b9c9fc3e4ddf0c3ea237c 551 Gene3D G3DSA:3.90.76.10 84 206 2.5E-170 T 14-10-2018 GYO_1615 ca33da0e680b9c9fc3e4ddf0c3ea237c 551 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 94 474 7.1E-88 T 14-10-2018 IPR000914 Solute-binding protein family 5 domain GYO_1615 ca33da0e680b9c9fc3e4ddf0c3ea237c 551 ProSitePatterns PS01040 Bacterial extracellular solute-binding proteins, family 5 signature. 100 122 - T 14-10-2018 IPR023765 Solute-binding protein family 5, conserved site GYO_1615 ca33da0e680b9c9fc3e4ddf0c3ea237c 551 PIRSF PIRSF002741 8 550 2.0E-121 T 14-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 GYO_1615 ca33da0e680b9c9fc3e4ddf0c3ea237c 551 Gene3D G3DSA:3.10.105.10 306 524 2.5E-170 T 14-10-2018 GYO_1615 ca33da0e680b9c9fc3e4ddf0c3ea237c 551 SUPERFAMILY SSF53850 49 545 1.96E-135 T 14-10-2018 GYO_3893 32b0f2c6870e6e489d3114c473f9d31f 229 SUPERFAMILY SSF52172 3 136 2.13E-34 T 14-10-2018 IPR011006 CheY-like superfamily GYO_3893 32b0f2c6870e6e489d3114c473f9d31f 229 SUPERFAMILY SSF46894 152 227 2.07E-24 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 GYO_3893 32b0f2c6870e6e489d3114c473f9d31f 229 SMART SM00448 4 117 9.1E-28 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 GYO_3893 32b0f2c6870e6e489d3114c473f9d31f 229 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 180 196 1.0E-14 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 GYO_3893 32b0f2c6870e6e489d3114c473f9d31f 229 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 166 180 1.0E-14 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 GYO_3893 32b0f2c6870e6e489d3114c473f9d31f 229 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 196 208 1.0E-14 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 GYO_3893 32b0f2c6870e6e489d3114c473f9d31f 229 Pfam PF00196 Bacterial regulatory proteins, luxR family 165 220 7.9E-25 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 GYO_3893 32b0f2c6870e6e489d3114c473f9d31f 229 Pfam PF00072 Response regulator receiver domain 6 118 5.3E-32 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 GYO_3893 32b0f2c6870e6e489d3114c473f9d31f 229 Gene3D G3DSA:3.40.50.12740 4 226 4.3E-70 T 14-10-2018 GYO_3893 32b0f2c6870e6e489d3114c473f9d31f 229 ProSitePatterns PS00622 LuxR-type HTH domain signature. 180 207 - T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 GYO_3893 32b0f2c6870e6e489d3114c473f9d31f 229 SMART SM00421 163 220 9.7E-29 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 GYO_2215 5306c4a8943d08ca9e29b1c463022472 493 Gene3D G3DSA:3.50.50.60 153 279 1.1E-34 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily GYO_2215 5306c4a8943d08ca9e29b1c463022472 493 Gene3D G3DSA:3.50.50.60 289 493 3.0E-15 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily GYO_2215 5306c4a8943d08ca9e29b1c463022472 493 SUPERFAMILY SSF51971 151 421 1.65E-62 T 14-10-2018 GYO_2215 5306c4a8943d08ca9e29b1c463022472 493 Pfam PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster 24 140 1.3E-21 T 14-10-2018 IPR028261 Dihydroprymidine dehydrogenase domain II Reactome: R-HSA-73621 GYO_2215 5306c4a8943d08ca9e29b1c463022472 493 SUPERFAMILY SSF46548 2 163 1.1E-36 T 14-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 GYO_2215 5306c4a8943d08ca9e29b1c463022472 493 Gene3D G3DSA:1.10.1060.10 9 152 8.5E-20 T 14-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 GYO_2215 5306c4a8943d08ca9e29b1c463022472 493 PRINTS PR00419 Adrenodoxin reductase family signature 295 309 1.0E-24 T 14-10-2018 GYO_2215 5306c4a8943d08ca9e29b1c463022472 493 PRINTS PR00419 Adrenodoxin reductase family signature 154 176 1.0E-24 T 14-10-2018 GYO_2215 5306c4a8943d08ca9e29b1c463022472 493 PRINTS PR00419 Adrenodoxin reductase family signature 177 190 1.0E-24 T 14-10-2018 GYO_2215 5306c4a8943d08ca9e29b1c463022472 493 PRINTS PR00419 Adrenodoxin reductase family signature 219 229 1.0E-24 T 14-10-2018 GYO_2215 5306c4a8943d08ca9e29b1c463022472 493 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 153 475 2.3E-26 T 14-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 GYO_2215 5306c4a8943d08ca9e29b1c463022472 493 TIGRFAM TIGR01317 GOGAT_sm_gam: glutamate synthase, NADH/NADPH, small subunit 3 493 3.8E-262 T 14-10-2018 IPR006005 Glutamate synthase, NADH/NADPH, small subunit 1 GO:0006537|GO:0016639|GO:0055114 GYO_0628 ef68fe9a679571571440ad549b480076 250 Pfam PF09339 IclR helix-turn-helix domain 8 56 9.1E-13 T 14-10-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 GYO_0628 ef68fe9a679571571440ad549b480076 250 SUPERFAMILY SSF46785 7 77 9.82E-14 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily GYO_0628 ef68fe9a679571571440ad549b480076 250 SMART SM00346 5 93 7.0E-34 T 14-10-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 GYO_0628 ef68fe9a679571571440ad549b480076 250 Gene3D G3DSA:1.10.10.10 3 76 4.2E-17 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily GYO_0628 ef68fe9a679571571440ad549b480076 250 Pfam PF01614 Bacterial transcriptional regulator 120 245 1.8E-37 T 14-10-2018 IPR014757 Transcription regulator IclR, C-terminal GYO_0628 ef68fe9a679571571440ad549b480076 250 Gene3D G3DSA:3.30.450.40 77 250 1.1E-52 T 14-10-2018 IPR029016 GAF-like domain superfamily GYO_0628 ef68fe9a679571571440ad549b480076 250 SUPERFAMILY SSF55781 61 249 8.5E-47 T 14-10-2018 GYO_3241 365403893d4e12481b033020dbe731a1 718 Pfam PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) 105 182 1.4E-15 T 14-10-2018 IPR004193 Glycoside hydrolase, family 13, N-terminal GO:0004553|GO:0005975 Reactome: R-HSA-3322077|Reactome: R-HSA-3878781 GYO_3241 365403893d4e12481b033020dbe731a1 718 SUPERFAMILY SSF51445 194 620 8.52E-123 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily GYO_3241 365403893d4e12481b033020dbe731a1 718 TIGRFAM TIGR02104 pulA_typeI: pullulanase, type I 96 687 5.3E-262 T 14-10-2018 IPR011840 Pullulanase, type I GYO_3241 365403893d4e12481b033020dbe731a1 718 Gene3D G3DSA:3.20.20.80 201 622 1.3E-191 T 14-10-2018 GYO_3241 365403893d4e12481b033020dbe731a1 718 Pfam PF00128 Alpha amylase, catalytic domain 251 343 7.0E-7 T 14-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 GYO_3241 365403893d4e12481b033020dbe731a1 718 Pfam PF00128 Alpha amylase, catalytic domain 375 574 6.9E-5 T 14-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 GYO_3241 365403893d4e12481b033020dbe731a1 718 Gene3D G3DSA:2.60.40.10 98 200 9.1E-25 T 14-10-2018 IPR013783 Immunoglobulin-like fold GYO_3241 365403893d4e12481b033020dbe731a1 718 SUPERFAMILY SSF81296 98 202 8.75E-21 T 14-10-2018 IPR014756 Immunoglobulin E-set GYO_3241 365403893d4e12481b033020dbe731a1 718 SMART SM00642 219 613 1.4E-7 T 14-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 GYO_3241 365403893d4e12481b033020dbe731a1 718 Gene3D G3DSA:2.60.40.2320 1 97 6.4E-35 T 14-10-2018 GYO_3241 365403893d4e12481b033020dbe731a1 718 Gene3D G3DSA:2.60.40.1180 623 718 1.7E-40 T 14-10-2018 IPR013780 Glycosyl hydrolase, all-beta GYO_0161 4ec6b0312cbac36fd4100c5908310d99 146 TIGRFAM TIGR01071 rplO_bact: ribosomal protein uL15 2 143 6.8E-57 T 14-10-2018 IPR005749 Ribosomal protein L15, bacterial-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 GYO_0161 4ec6b0312cbac36fd4100c5908310d99 146 ProSitePatterns PS00475 Ribosomal protein L15 signature. 110 140 - T 14-10-2018 IPR001196 Ribosomal protein L15, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 GYO_0161 4ec6b0312cbac36fd4100c5908310d99 146 Hamap MF_01341 50S ribosomal protein L15 [rplO]. 3 146 23.045 T 14-10-2018 IPR030878 Ribosomal protein L15 GO:0003735|GO:0006412|GO:0015934 GYO_0161 4ec6b0312cbac36fd4100c5908310d99 146 SUPERFAMILY SSF52080 4 143 1.02E-50 T 14-10-2018 IPR036227 Ribosomal L18e/L15P superfamily GYO_0161 4ec6b0312cbac36fd4100c5908310d99 146 Pfam PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A 28 144 5.6E-39 T 14-10-2018 IPR021131 Ribosomal protein L18e/L15P GYO_0161 4ec6b0312cbac36fd4100c5908310d99 146 Gene3D G3DSA:3.100.10.10 66 146 2.6E-28 T 14-10-2018 GYO_3495 9e47d1b9b1164209c1a8d0a9417c49e8 200 PIRSF PIRSF016661 1 192 5.4E-40 T 14-10-2018 IPR003784 BioY protein GO:0005886|GO:0015225|GO:0015878 GYO_3495 9e47d1b9b1164209c1a8d0a9417c49e8 200 Pfam PF02632 BioY family 38 182 1.7E-29 T 14-10-2018 IPR003784 BioY protein GO:0005886|GO:0015225|GO:0015878 GYO_3495 9e47d1b9b1164209c1a8d0a9417c49e8 200 Gene3D G3DSA:1.10.1760.20 1 190 1.2E-43 T 14-10-2018 GYO_3299 a1242ce27e2d0f04eed0646e7ca4de60 90 Pfam PF10732 Protein of unknown function (DUF2524) 2 84 8.8E-37 T 14-10-2018 IPR019668 Uncharacterised protein family YtzC GYO_4226 c35d332c8452bec77e6d99100bf21821 301 Gene3D G3DSA:3.40.190.290 93 294 2.6E-60 T 14-10-2018 GYO_4226 c35d332c8452bec77e6d99100bf21821 301 Pfam PF03466 LysR substrate binding domain 90 290 7.8E-51 T 14-10-2018 IPR005119 LysR, substrate-binding GYO_4226 c35d332c8452bec77e6d99100bf21821 301 SUPERFAMILY SSF53850 90 292 7.17E-47 T 14-10-2018 GYO_4226 c35d332c8452bec77e6d99100bf21821 301 Gene3D G3DSA:1.10.10.10 1 92 1.5E-29 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily GYO_4226 c35d332c8452bec77e6d99100bf21821 301 SUPERFAMILY SSF46785 1 111 5.8E-24 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily GYO_4226 c35d332c8452bec77e6d99100bf21821 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 1.9E-10 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 GYO_4226 c35d332c8452bec77e6d99100bf21821 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 1.9E-10 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 GYO_4226 c35d332c8452bec77e6d99100bf21821 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 1.9E-10 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 GYO_4226 c35d332c8452bec77e6d99100bf21821 301 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 62 1.3E-21 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 GYO_0449 3231af142f70e646facf7f56cf59b27b 233 Gene3D G3DSA:1.20.120.530 97 231 6.4E-23 T 14-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal GYO_0449 3231af142f70e646facf7f56cf59b27b 233 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 41 55 5.6E-7 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 GYO_0449 3231af142f70e646facf7f56cf59b27b 233 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 55 71 5.6E-7 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 GYO_0449 3231af142f70e646facf7f56cf59b27b 233 SMART SM00345 22 81 8.8E-23 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 GYO_0449 3231af142f70e646facf7f56cf59b27b 233 SUPERFAMILY SSF48008 100 229 9.15E-21 T 14-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal GYO_0449 3231af142f70e646facf7f56cf59b27b 233 SMART SM00895 103 221 4.1E-17 T 14-10-2018 IPR011711 GntR, C-terminal GYO_0449 3231af142f70e646facf7f56cf59b27b 233 Pfam PF00392 Bacterial regulatory proteins, gntR family 18 80 1.3E-20 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 GYO_0449 3231af142f70e646facf7f56cf59b27b 233 Gene3D G3DSA:1.10.10.10 7 81 9.9E-20 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily GYO_0449 3231af142f70e646facf7f56cf59b27b 233 Pfam PF07729 FCD domain 104 220 2.4E-20 T 14-10-2018 IPR011711 GntR, C-terminal GYO_0449 3231af142f70e646facf7f56cf59b27b 233 SUPERFAMILY SSF46785 11 82 2.81E-17 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily GYO_2486 3477d14ade52a1177aa04f156b360a2e 423 SMART SM00028 135 168 67.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 GYO_2486 3477d14ade52a1177aa04f156b360a2e 423 SMART SM00028 238 271 63.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 GYO_2486 3477d14ade52a1177aa04f156b360a2e 423 SMART SM00028 340 373 20.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 GYO_2486 3477d14ade52a1177aa04f156b360a2e 423 SMART SM00028 374 407 180.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 GYO_2486 3477d14ade52a1177aa04f156b360a2e 423 SMART SM00028 171 204 0.004 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 GYO_2486 3477d14ade52a1177aa04f156b360a2e 423 SMART SM00028 272 305 130.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 GYO_2486 3477d14ade52a1177aa04f156b360a2e 423 Gene3D G3DSA:1.25.40.10 102 168 6.6E-6 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 GYO_2486 3477d14ade52a1177aa04f156b360a2e 423 SUPERFAMILY SSF48452 183 408 5.37E-25 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 GYO_2486 3477d14ade52a1177aa04f156b360a2e 423 Pfam PF13429 Tetratricopeptide repeat 259 401 1.2E-7 T 14-10-2018 GYO_2486 3477d14ade52a1177aa04f156b360a2e 423 Pfam PF14559 Tetratricopeptide repeat 47 110 3.2E-7 T 14-10-2018 GYO_2486 3477d14ade52a1177aa04f156b360a2e 423 SUPERFAMILY SSF48452 39 204 3.79E-21 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 GYO_2486 3477d14ade52a1177aa04f156b360a2e 423 Gene3D G3DSA:1.25.40.10 32 101 1.8E-11 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 GYO_2486 3477d14ade52a1177aa04f156b360a2e 423 Pfam PF13176 Tetratricopeptide repeat 176 203 0.0094 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 GYO_2486 3477d14ade52a1177aa04f156b360a2e 423 Gene3D G3DSA:1.25.40.10 170 418 3.6E-36 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 GYO_2555 927667a46e1f4236a0528b55e6335983 261 Hamap MF_01805 Segregation and condensation protein A [scpA]. 14 256 27.647 T 14-10-2018 IPR003768 Segregation and condensation protein A GYO_2555 927667a46e1f4236a0528b55e6335983 261 Pfam PF02616 Segregation and condensation protein ScpA 31 254 2.5E-82 T 14-10-2018 IPR003768 Segregation and condensation protein A GYO_2475 77d27255d231a4227b8153d4b4f161ca 137 SUPERFAMILY SSF52335 1 121 2.62E-50 T 14-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily GYO_2475 77d27255d231a4227b8153d4b4f161ca 137 Gene3D G3DSA:3.40.50.1380 1 131 1.1E-54 T 14-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily GYO_2475 77d27255d231a4227b8153d4b4f161ca 137 SMART SM00851 14 107 9.5E-22 T 14-10-2018 IPR011607 Methylglyoxal synthase-like domain GYO_2475 77d27255d231a4227b8153d4b4f161ca 137 Pfam PF02142 MGS-like domain 15 107 4.1E-18 T 14-10-2018 IPR011607 Methylglyoxal synthase-like domain GYO_2475 77d27255d231a4227b8153d4b4f161ca 137 ProSitePatterns PS01335 Methylglyoxal synthase active site. 54 62 - T 14-10-2018 IPR018148 Methylglyoxal synthase, active site GO:0008929|GO:0019242 KEGG: 00640+4.2.3.3 GYO_2475 77d27255d231a4227b8153d4b4f161ca 137 TIGRFAM TIGR00160 MGSA: methylglyoxal synthase 1 134 2.9E-65 T 14-10-2018 IPR004363 Methylglyoxal synthase GO:0008929|GO:0019242 KEGG: 00640+4.2.3.3 GYO_2475 77d27255d231a4227b8153d4b4f161ca 137 Hamap MF_00549 Methylglyoxal synthase [mgsA]. 1 120 34.079 T 14-10-2018 IPR004363 Methylglyoxal synthase GO:0008929|GO:0019242 KEGG: 00640+4.2.3.3 GYO_2475 77d27255d231a4227b8153d4b4f161ca 137 PIRSF PIRSF006614 1 134 1.5E-59 T 14-10-2018 IPR004363 Methylglyoxal synthase GO:0008929|GO:0019242 KEGG: 00640+4.2.3.3 GYO_1342 e3ff12262fe1f386a284e5c9f7bc8619 285 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 51 280 2.0E-59 T 14-10-2018 GYO_1342 e3ff12262fe1f386a284e5c9f7bc8619 285 SUPERFAMILY SSF51735 40 282 4.68E-80 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily GYO_1342 e3ff12262fe1f386a284e5c9f7bc8619 285 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 177 205 - T 14-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 GYO_1342 e3ff12262fe1f386a284e5c9f7bc8619 285 Gene3D G3DSA:3.40.50.720 2 282 4.4E-84 T 14-10-2018 GYO_1342 e3ff12262fe1f386a284e5c9f7bc8619 285 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 211 228 7.4E-35 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR GYO_1342 e3ff12262fe1f386a284e5c9f7bc8619 285 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 118 129 7.4E-35 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR GYO_1342 e3ff12262fe1f386a284e5c9f7bc8619 285 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 164 180 7.4E-35 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR GYO_1342 e3ff12262fe1f386a284e5c9f7bc8619 285 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 245 265 7.4E-35 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR GYO_1342 e3ff12262fe1f386a284e5c9f7bc8619 285 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 43 60 7.4E-35 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR GYO_1342 e3ff12262fe1f386a284e5c9f7bc8619 285 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 190 209 7.4E-35 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR GYO_1342 e3ff12262fe1f386a284e5c9f7bc8619 285 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 190 209 4.3E-9 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR GYO_1342 e3ff12262fe1f386a284e5c9f7bc8619 285 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 118 129 4.3E-9 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR GYO_1342 e3ff12262fe1f386a284e5c9f7bc8619 285 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 170 178 4.3E-9 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR GYO_2655 7fcc7b5aec6055d8901f1c533b4f91c2 691 Pfam PF00158 Sigma-54 interaction domain 367 534 6.9E-67 T 14-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 GYO_2655 7fcc7b5aec6055d8901f1c533b4f91c2 691 Gene3D G3DSA:1.10.8.60 539 618 1.7E-21 T 14-10-2018 GYO_2655 7fcc7b5aec6055d8901f1c533b4f91c2 691 Gene3D G3DSA:3.40.50.720 2 81 9.3E-7 T 14-10-2018 GYO_2655 7fcc7b5aec6055d8901f1c533b4f91c2 691 Gene3D G3DSA:3.30.450.20 222 338 5.8E-17 T 14-10-2018 GYO_2655 7fcc7b5aec6055d8901f1c533b4f91c2 691 Gene3D G3DSA:3.30.450.20 106 218 1.6E-21 T 14-10-2018 GYO_2655 7fcc7b5aec6055d8901f1c533b4f91c2 691 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 581 590 - T 14-10-2018 IPR025944 Sigma-54 interaction domain, conserved site GYO_2655 7fcc7b5aec6055d8901f1c533b4f91c2 691 SMART SM00382 387 531 5.4E-14 T 14-10-2018 IPR003593 AAA+ ATPase domain GYO_2655 7fcc7b5aec6055d8901f1c533b4f91c2 691 SUPERFAMILY SSF52540 366 611 7.64E-67 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase GYO_2655 7fcc7b5aec6055d8901f1c533b4f91c2 691 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 649 666 1.7E-8 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 GYO_2655 7fcc7b5aec6055d8901f1c533b4f91c2 691 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 666 686 1.7E-8 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 GYO_2655 7fcc7b5aec6055d8901f1c533b4f91c2 691 SUPERFAMILY SSF51735 1 101 4.49E-13 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily GYO_2655 7fcc7b5aec6055d8901f1c533b4f91c2 691 Gene3D G3DSA:1.10.10.60 634 687 1.9E-15 T 14-10-2018 GYO_2655 7fcc7b5aec6055d8901f1c533b4f91c2 691 Pfam PF02954 Bacterial regulatory protein, Fis family 643 683 9.3E-15 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 GYO_2655 7fcc7b5aec6055d8901f1c533b4f91c2 691 SUPERFAMILY SSF55785 216 335 3.66E-15 T 14-10-2018 IPR035965 PAS domain superfamily GYO_2655 7fcc7b5aec6055d8901f1c533b4f91c2 691 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 233 348 1.1E-18 T 14-10-2018 IPR000014 PAS domain GYO_2655 7fcc7b5aec6055d8901f1c533b4f91c2 691 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 115 226 1.2E-12 T 14-10-2018 IPR000014 PAS domain GYO_2655 7fcc7b5aec6055d8901f1c533b4f91c2 691 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 391 404 - T 14-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 GYO_2655 7fcc7b5aec6055d8901f1c533b4f91c2 691 Pfam PF00989 PAS fold 120 217 2.9E-15 T 14-10-2018 IPR013767 PAS fold GO:0006355 GYO_2655 7fcc7b5aec6055d8901f1c533b4f91c2 691 Pfam PF00989 PAS fold 236 338 2.1E-15 T 14-10-2018 IPR013767 PAS fold GO:0006355 GYO_2655 7fcc7b5aec6055d8901f1c533b4f91c2 691 SUPERFAMILY SSF46689 581 685 1.7E-11 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 GYO_2655 7fcc7b5aec6055d8901f1c533b4f91c2 691 SUPERFAMILY SSF55785 104 214 1.73E-16 T 14-10-2018 IPR035965 PAS domain superfamily GYO_2655 7fcc7b5aec6055d8901f1c533b4f91c2 691 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 454 469 - T 14-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 GYO_2655 7fcc7b5aec6055d8901f1c533b4f91c2 691 Gene3D G3DSA:3.40.50.300 354 538 2.7E-64 T 14-10-2018 GYO_2655 7fcc7b5aec6055d8901f1c533b4f91c2 691 SMART SM00091 117 183 2.2E-10 T 14-10-2018 IPR000014 PAS domain GYO_2655 7fcc7b5aec6055d8901f1c533b4f91c2 691 SMART SM00091 235 300 1.4E-6 T 14-10-2018 IPR000014 PAS domain GYO_0150 91d9bcff262eb44774a711e84282aba5 66 Hamap MF_00374 50S ribosomal protein L29 [rpmC]. 1 60 19.203 T 14-10-2018 IPR001854 Ribosomal protein L29/L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 GYO_0150 91d9bcff262eb44774a711e84282aba5 66 SUPERFAMILY SSF46561 1 63 4.32E-24 T 14-10-2018 IPR036049 Ribosomal protein L29/L35 superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 GYO_0150 91d9bcff262eb44774a711e84282aba5 66 ProSitePatterns PS00579 Ribosomal protein L29 signature. 39 53 - T 14-10-2018 IPR018254 Ribosomal protein L29, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 GYO_0150 91d9bcff262eb44774a711e84282aba5 66 TIGRFAM TIGR00012 L29: ribosomal protein uL29 5 60 5.7E-25 T 14-10-2018 IPR001854 Ribosomal protein L29/L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 GYO_0150 91d9bcff262eb44774a711e84282aba5 66 Pfam PF00831 Ribosomal L29 protein 4 60 1.3E-26 T 14-10-2018 IPR001854 Ribosomal protein L29/L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 GYO_0150 91d9bcff262eb44774a711e84282aba5 66 Gene3D G3DSA:1.10.287.310 1 66 2.9E-31 T 14-10-2018 GYO_1694 829147e7e2b371c9ef8704103f5b5e9f 500 Pfam PF02743 Cache domain 37 215 4.7E-26 T 14-10-2018 IPR033479 Double Cache domain 1 GYO_1694 829147e7e2b371c9ef8704103f5b5e9f 500 Gene3D G3DSA:1.10.287.130 288 347 6.0E-18 T 14-10-2018 GYO_1694 829147e7e2b371c9ef8704103f5b5e9f 500 SUPERFAMILY SSF55874 352 497 8.77E-36 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily GYO_1694 829147e7e2b371c9ef8704103f5b5e9f 500 PRINTS PR00344 Bacterial sensor protein C-terminal signature 459 477 2.1E-15 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 GYO_1694 829147e7e2b371c9ef8704103f5b5e9f 500 PRINTS PR00344 Bacterial sensor protein C-terminal signature 430 444 2.1E-15 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 GYO_1694 829147e7e2b371c9ef8704103f5b5e9f 500 PRINTS PR00344 Bacterial sensor protein C-terminal signature 448 458 2.1E-15 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 GYO_1694 829147e7e2b371c9ef8704103f5b5e9f 500 PRINTS PR00344 Bacterial sensor protein C-terminal signature 483 496 2.1E-15 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 GYO_1694 829147e7e2b371c9ef8704103f5b5e9f 500 SUPERFAMILY SSF47384 274 350 5.89E-14 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 GYO_1694 829147e7e2b371c9ef8704103f5b5e9f 500 Gene3D G3DSA:3.30.450.20 77 175 5.8E-70 T 14-10-2018 GYO_1694 829147e7e2b371c9ef8704103f5b5e9f 500 Gene3D G3DSA:3.30.565.10 353 500 2.7E-37 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily GYO_1694 829147e7e2b371c9ef8704103f5b5e9f 500 SMART SM00388 285 350 9.4E-16 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 GYO_1694 829147e7e2b371c9ef8704103f5b5e9f 500 SMART SM00387 393 499 2.1E-31 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase GYO_1694 829147e7e2b371c9ef8704103f5b5e9f 500 Gene3D G3DSA:3.30.450.20 48 226 5.8E-70 T 14-10-2018 GYO_1694 829147e7e2b371c9ef8704103f5b5e9f 500 Pfam PF00512 His Kinase A (phospho-acceptor) domain 287 348 1.6E-15 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 GYO_1694 829147e7e2b371c9ef8704103f5b5e9f 500 SUPERFAMILY SSF103190 86 184 1.1E-9 T 14-10-2018 IPR029151 Periplasmic sensor-like domain superfamily GYO_1694 829147e7e2b371c9ef8704103f5b5e9f 500 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 396 497 6.2E-22 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase GYO_3407 de6e992e6a3cafe4a6ae7935108dd1ff 661 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 428 612 1.9E-62 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 GYO_3407 de6e992e6a3cafe4a6ae7935108dd1ff 661 SMART SM00319 33 151 6.6E-44 T 14-10-2018 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding GO:0006935|GO:0007165 GYO_3407 de6e992e6a3cafe4a6ae7935108dd1ff 661 SMART SM00304 303 355 2.8E-15 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 GYO_3407 de6e992e6a3cafe4a6ae7935108dd1ff 661 SUPERFAMILY SSF58104 323 659 5.75E-73 T 14-10-2018 GYO_3407 de6e992e6a3cafe4a6ae7935108dd1ff 661 Gene3D G3DSA:3.30.450.20 72 183 2.1E-34 T 14-10-2018 GYO_3407 de6e992e6a3cafe4a6ae7935108dd1ff 661 Pfam PF02743 Cache domain 50 264 3.3E-30 T 14-10-2018 IPR033479 Double Cache domain 1 GYO_3407 de6e992e6a3cafe4a6ae7935108dd1ff 661 Gene3D G3DSA:1.10.287.950 355 659 4.5E-71 T 14-10-2018 GYO_3407 de6e992e6a3cafe4a6ae7935108dd1ff 661 SMART SM00283 384 659 3.7E-94 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 GYO_3407 de6e992e6a3cafe4a6ae7935108dd1ff 661 Gene3D G3DSA:3.30.450.20 61 270 2.1E-34 T 14-10-2018 GYO_3407 de6e992e6a3cafe4a6ae7935108dd1ff 661 Pfam PF00672 HAMP domain 303 351 3.4E-14 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 GYO_3407 de6e992e6a3cafe4a6ae7935108dd1ff 661 SUPERFAMILY SSF103190 87 191 9.42E-11 T 14-10-2018 IPR029151 Periplasmic sensor-like domain superfamily GYO_3407 de6e992e6a3cafe4a6ae7935108dd1ff 661 Gene3D G3DSA:1.10.8.500 303 354 3.8E-10 T 14-10-2018 GYO_2785 732f2a3e58a25dcd3003944689e7d959 371 Pfam PF04542 Sigma-70 region 2 138 207 3.3E-22 T 14-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 GYO_2785 732f2a3e58a25dcd3003944689e7d959 371 Pfam PF00140 Sigma-70 factor, region 1.2 100 133 1.7E-16 T 14-10-2018 IPR009042 RNA polymerase sigma-70 region 1.2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 GYO_2785 732f2a3e58a25dcd3003944689e7d959 371 Gene3D G3DSA:1.10.220.120 13 72 4.4E-9 T 14-10-2018 GYO_2785 732f2a3e58a25dcd3003944689e7d959 371 Pfam PF04545 Sigma-70, region 4 306 359 5.1E-20 T 14-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 GYO_2785 732f2a3e58a25dcd3003944689e7d959 371 Hamap MF_00963 RNA polymerase sigma factor RpoD [rpoD]. 7 371 34.085 T 14-10-2018 IPR028630 RNA polymerase sigma factor RpoD GO:0006352|GO:0016987 GYO_2785 732f2a3e58a25dcd3003944689e7d959 371 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 331 357 - T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 GYO_2785 732f2a3e58a25dcd3003944689e7d959 371 SUPERFAMILY SSF88659 268 369 5.23E-30 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like GYO_2785 732f2a3e58a25dcd3003944689e7d959 371 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 136 359 1.0E-39 T 14-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 GYO_2785 732f2a3e58a25dcd3003944689e7d959 371 Pfam PF03979 Sigma-70 factor, region 1.1 14 83 1.4E-15 T 14-10-2018 IPR007127 RNA polymerase sigma factor 70, region 1.1 GO:0003677|GO:0006355 GYO_2785 732f2a3e58a25dcd3003944689e7d959 371 SUPERFAMILY SSF88659 211 284 1.26E-23 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like GYO_2785 732f2a3e58a25dcd3003944689e7d959 371 Pfam PF04539 Sigma-70 region 3 217 293 4.1E-33 T 14-10-2018 IPR007624 RNA polymerase sigma-70 region 3 GO:0003700|GO:0006352|GO:0006355 GYO_2785 732f2a3e58a25dcd3003944689e7d959 371 Gene3D G3DSA:1.10.10.10 211 286 3.9E-36 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily GYO_2785 732f2a3e58a25dcd3003944689e7d959 371 TIGRFAM TIGR02393 RpoD_Cterm: RNA polymerase sigma factor RpoD 135 370 9.9E-126 T 14-10-2018 IPR012760 RNA polymerase sigma factor RpoD, C-terminal GO:0003677|GO:0006352|GO:0006355|GO:0016987 GYO_2785 732f2a3e58a25dcd3003944689e7d959 371 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 162 175 - T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 GYO_2785 732f2a3e58a25dcd3003944689e7d959 371 Gene3D G3DSA:1.10.601.10 98 133 6.2E-11 T 14-10-2018 GYO_2785 732f2a3e58a25dcd3003944689e7d959 371 Gene3D G3DSA:1.10.601.10 134 210 3.5E-51 T 14-10-2018 GYO_2785 732f2a3e58a25dcd3003944689e7d959 371 SUPERFAMILY SSF88946 99 208 4.19E-53 T 14-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 GYO_2785 732f2a3e58a25dcd3003944689e7d959 371 PRINTS PR00046 Major sigma-70 factor signature 346 357 2.8E-32 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 GYO_2785 732f2a3e58a25dcd3003944689e7d959 371 PRINTS PR00046 Major sigma-70 factor signature 186 194 2.8E-32 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 GYO_2785 732f2a3e58a25dcd3003944689e7d959 371 PRINTS PR00046 Major sigma-70 factor signature 310 322 2.8E-32 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 GYO_2785 732f2a3e58a25dcd3003944689e7d959 371 PRINTS PR00046 Major sigma-70 factor signature 162 175 2.8E-32 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 GYO_2785 732f2a3e58a25dcd3003944689e7d959 371 PRINTS PR00046 Major sigma-70 factor signature 331 346 2.8E-32 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 GYO_2785 732f2a3e58a25dcd3003944689e7d959 371 Gene3D G3DSA:1.10.10.10 287 371 2.6E-36 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily GYO_0495 191ea98fa8e5ded6ea97f0069dd779b1 192 Pfam PF02342 TerD domain 1 188 1.2E-83 T 14-10-2018 IPR003325 TerD domain GYO_0495 191ea98fa8e5ded6ea97f0069dd779b1 192 Gene3D G3DSA:2.60.60.30 19 187 1.0E-70 T 14-10-2018 GYO_2048 2b2c2d05d14b946a228290f958de9f1f 348 SMART SM00382 56 227 6.9E-12 T 14-10-2018 IPR003593 AAA+ ATPase domain GYO_2048 2b2c2d05d14b946a228290f958de9f1f 348 Hamap MF_00268 Protein RecA [recA]. 4 328 53.176 T 14-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 GYO_2048 2b2c2d05d14b946a228290f958de9f1f 348 ProSitePatterns PS00321 recA signature. 212 220 - T 14-10-2018 IPR020584 DNA recombination/repair protein RecA, conserved site GO:0003677|GO:0005524|GO:0006259|GO:0008094 GYO_2048 2b2c2d05d14b946a228290f958de9f1f 348 SUPERFAMILY SSF52540 3 266 8.71E-65 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase GYO_2048 2b2c2d05d14b946a228290f958de9f1f 348 Gene3D G3DSA:3.40.50.300 25 266 3.9E-82 T 14-10-2018 GYO_2048 2b2c2d05d14b946a228290f958de9f1f 348 Pfam PF00154 recA bacterial DNA recombination protein 7 267 2.0E-147 T 14-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 GYO_2048 2b2c2d05d14b946a228290f958de9f1f 348 TIGRFAM TIGR02012 tigrfam_recA: protein RecA 3 323 1.5E-177 T 14-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 GYO_2048 2b2c2d05d14b946a228290f958de9f1f 348 PRINTS PR00142 RecA protein signature 92 121 3.8E-85 T 14-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 GYO_2048 2b2c2d05d14b946a228290f958de9f1f 348 PRINTS PR00142 RecA protein signature 209 237 3.8E-85 T 14-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 GYO_2048 2b2c2d05d14b946a228290f958de9f1f 348 PRINTS PR00142 RecA protein signature 242 271 3.8E-85 T 14-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 GYO_2048 2b2c2d05d14b946a228290f958de9f1f 348 PRINTS PR00142 RecA protein signature 126 155 3.8E-85 T 14-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 GYO_2048 2b2c2d05d14b946a228290f958de9f1f 348 PRINTS PR00142 RecA protein signature 296 313 3.8E-85 T 14-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 GYO_2048 2b2c2d05d14b946a228290f958de9f1f 348 PRINTS PR00142 RecA protein signature 164 193 3.8E-85 T 14-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 GYO_2048 2b2c2d05d14b946a228290f958de9f1f 348 SUPERFAMILY SSF54752 267 326 9.55E-22 T 14-10-2018 IPR023400 DNA recombination and repair protein RecA, C-terminal GYO_2048 2b2c2d05d14b946a228290f958de9f1f 348 Gene3D G3DSA:3.30.250.10 267 345 2.8E-29 T 14-10-2018 IPR023400 DNA recombination and repair protein RecA, C-terminal GYO_3881 7a0ee0320209014f9639898bd194a780 74 TIGRFAM TIGR00202 csrA: carbon storage regulator 1 69 2.6E-35 T 14-10-2018 IPR003751 Translational regulator CsrA GO:0003723|GO:0006109|GO:0006402 GYO_3881 7a0ee0320209014f9639898bd194a780 74 Hamap MF_00167 Translational regulator CsrA [csrA]. 1 68 17.849 T 14-10-2018 IPR003751 Translational regulator CsrA GO:0003723|GO:0006109|GO:0006402 GYO_3881 7a0ee0320209014f9639898bd194a780 74 Gene3D G3DSA:3.30.70.1680 1 63 2.7E-30 T 14-10-2018 IPR036107 Carbon storage regulator superfamily GO:0003723|GO:0006109|GO:0006402 GYO_3881 7a0ee0320209014f9639898bd194a780 74 ProDom PD009007 STORAGE CARBON REGULATOR RNA-BINDING HOMOLOG CSRA REGULATOR GLOBAL PLASMID RSMA 1 48 4.0E-20 T 14-10-2018 IPR003751 Translational regulator CsrA GO:0003723|GO:0006109|GO:0006402 GYO_3881 7a0ee0320209014f9639898bd194a780 74 SUPERFAMILY SSF117130 1 55 3.14E-20 T 14-10-2018 IPR036107 Carbon storage regulator superfamily GO:0003723|GO:0006109|GO:0006402 GYO_3881 7a0ee0320209014f9639898bd194a780 74 Pfam PF02599 Global regulator protein family 1 53 3.7E-25 T 14-10-2018 IPR003751 Translational regulator CsrA GO:0003723|GO:0006109|GO:0006402 GYO_2241 62796f48ac82ee5d19d9e082e0bce40f 561 Gene3D G3DSA:1.10.287.950 289 560 2.2E-63 T 14-10-2018 GYO_2241 62796f48ac82ee5d19d9e082e0bce40f 561 Gene3D G3DSA:1.20.1480.50 160 262 1.1E-11 T 14-10-2018 GYO_2241 62796f48ac82ee5d19d9e082e0bce40f 561 SMART SM00304 202 256 1.0E-11 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 GYO_2241 62796f48ac82ee5d19d9e082e0bce40f 561 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 412 441 2.0E-20 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 GYO_2241 62796f48ac82ee5d19d9e082e0bce40f 561 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 1 23 2.0E-20 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 GYO_2241 62796f48ac82ee5d19d9e082e0bce40f 561 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 383 410 2.0E-20 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 GYO_2241 62796f48ac82ee5d19d9e082e0bce40f 561 SUPERFAMILY SSF58104 224 560 4.05E-69 T 14-10-2018 GYO_2241 62796f48ac82ee5d19d9e082e0bce40f 561 SMART SM00283 285 560 3.9E-101 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 GYO_2241 62796f48ac82ee5d19d9e082e0bce40f 561 Pfam PF00672 HAMP domain 203 252 1.1E-9 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 GYO_2241 62796f48ac82ee5d19d9e082e0bce40f 561 Pfam PF05227 CHASE3 domain 41 143 1.5E-6 T 14-10-2018 IPR007891 CHASE3 GYO_2241 62796f48ac82ee5d19d9e082e0bce40f 561 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 330 511 3.8E-43 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 GYO_2648 05bd3cae3fcff934c28d9dd0d743ac7a 427 SUPERFAMILY SSF47005 113 157 3.4E-12 T 14-10-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 GYO_2648 05bd3cae3fcff934c28d9dd0d743ac7a 427 Gene3D G3DSA:3.30.559.10 182 427 1.9E-100 T 14-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 GYO_2648 05bd3cae3fcff934c28d9dd0d743ac7a 427 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 28 57 - T 14-10-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 GYO_2648 05bd3cae3fcff934c28d9dd0d743ac7a 427 Gene3D G3DSA:4.10.320.10 111 158 2.3E-17 T 14-10-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 GYO_2648 05bd3cae3fcff934c28d9dd0d743ac7a 427 SUPERFAMILY SSF52777 196 420 1.82E-85 T 14-10-2018 GYO_2648 05bd3cae3fcff934c28d9dd0d743ac7a 427 Pfam PF00364 Biotin-requiring enzyme 5 77 6.0E-24 T 14-10-2018 IPR000089 Biotin/lipoyl attachment GYO_2648 05bd3cae3fcff934c28d9dd0d743ac7a 427 Pfam PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 197 421 8.8E-85 T 14-10-2018 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain GO:0016746 Reactome: R-HSA-389661 GYO_2648 05bd3cae3fcff934c28d9dd0d743ac7a 427 Gene3D G3DSA:2.40.50.100 1 103 1.0E-27 T 14-10-2018 GYO_2648 05bd3cae3fcff934c28d9dd0d743ac7a 427 Pfam PF02817 e3 binding domain 120 153 5.9E-14 T 14-10-2018 IPR004167 Peripheral subunit-binding domain GO:0016746 Reactome: R-HSA-389661 GYO_2648 05bd3cae3fcff934c28d9dd0d743ac7a 427 SUPERFAMILY SSF51230 2 97 5.63E-27 T 14-10-2018 IPR011053 Single hybrid motif GYO_0634 cabc0ac9fc01b2d429b22c3999fe2198 696 SUPERFAMILY SSF63520 198 296 9.68E-23 T 14-10-2018 IPR036634 PRD domain superfamily GO:0006355 GYO_0634 cabc0ac9fc01b2d429b22c3999fe2198 696 SUPERFAMILY SSF63520 311 407 1.96E-18 T 14-10-2018 IPR036634 PRD domain superfamily GO:0006355 GYO_0634 cabc0ac9fc01b2d429b22c3999fe2198 696 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 555 683 5.9E-8 T 14-10-2018 IPR002178 PTS EIIA type-2 domain GYO_0634 cabc0ac9fc01b2d429b22c3999fe2198 696 Gene3D G3DSA:1.10.1790.10 311 407 1.4E-16 T 14-10-2018 GYO_0634 cabc0ac9fc01b2d429b22c3999fe2198 696 Gene3D G3DSA:1.10.1790.10 203 297 2.7E-20 T 14-10-2018 GYO_0634 cabc0ac9fc01b2d429b22c3999fe2198 696 Pfam PF08279 HTH domain 6 62 5.9E-9 T 14-10-2018 IPR013196 Helix-turn-helix, type 11 GYO_0634 cabc0ac9fc01b2d429b22c3999fe2198 696 SUPERFAMILY SSF46785 87 152 6.23E-7 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily GYO_0634 cabc0ac9fc01b2d429b22c3999fe2198 696 Gene3D G3DSA:3.40.50.2300 414 501 2.8E-14 T 14-10-2018 GYO_0634 cabc0ac9fc01b2d429b22c3999fe2198 696 SUPERFAMILY SSF52794 415 498 9.42E-13 T 14-10-2018 IPR036095 PTS system IIB component-like superfamily GO:0008982|GO:0009401 GYO_0634 cabc0ac9fc01b2d429b22c3999fe2198 696 SUPERFAMILY SSF46785 1 45 3.43E-6 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily GYO_0634 cabc0ac9fc01b2d429b22c3999fe2198 696 Gene3D G3DSA:1.10.10.10 1 62 2.8E-9 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily GYO_0634 cabc0ac9fc01b2d429b22c3999fe2198 696 Gene3D G3DSA:1.10.10.10 72 149 6.1E-6 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily GYO_0634 cabc0ac9fc01b2d429b22c3999fe2198 696 Pfam PF00874 PRD domain 208 295 2.9E-21 T 14-10-2018 IPR011608 PRD domain GO:0006355 GYO_0634 cabc0ac9fc01b2d429b22c3999fe2198 696 Pfam PF00874 PRD domain 318 405 7.7E-20 T 14-10-2018 IPR011608 PRD domain GO:0006355 GYO_0634 cabc0ac9fc01b2d429b22c3999fe2198 696 SUPERFAMILY SSF55804 536 684 9.94E-14 T 14-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 GYO_0634 cabc0ac9fc01b2d429b22c3999fe2198 696 Pfam PF05043 Mga helix-turn-helix domain 87 158 2.5E-5 T 14-10-2018 IPR007737 Mga helix-turn-helix domain GYO_0634 cabc0ac9fc01b2d429b22c3999fe2198 696 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 416 491 1.1E-6 T 14-10-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 GYO_4304 b305dd5f49fb054a77cc70d69c11a578 238 Pfam PF01144 Coenzyme A transferase 9 215 1.4E-82 T 14-10-2018 IPR004165 Coenzyme A transferase family I GO:0008410 Reactome: R-HSA-77108 GYO_4304 b305dd5f49fb054a77cc70d69c11a578 238 SMART SM00882 5 216 7.6E-99 T 14-10-2018 IPR004165 Coenzyme A transferase family I GO:0008410 Reactome: R-HSA-77108 GYO_4304 b305dd5f49fb054a77cc70d69c11a578 238 Gene3D G3DSA:3.40.1080.10 1 226 1.4E-106 T 14-10-2018 GYO_4304 b305dd5f49fb054a77cc70d69c11a578 238 TIGRFAM TIGR02429 pcaI_scoA_fam: 3-oxoacid CoA-transferase, A subunit 2 215 2.4E-81 T 14-10-2018 IPR012792 3-oxoacid CoA-transferase, subunit A GO:0008410 Reactome: R-HSA-77108 GYO_4304 b305dd5f49fb054a77cc70d69c11a578 238 ProSitePatterns PS01273 Coenzyme A transferases signature 1. 17 32 - T 14-10-2018 IPR004163 Coenzyme A transferase binding site GO:0008410 Reactome: R-HSA-77108 GYO_4304 b305dd5f49fb054a77cc70d69c11a578 238 SUPERFAMILY SSF100950 3 228 4.61E-92 T 14-10-2018 IPR037171 NagB/RpiA transferase-like GYO_2473 831632ffd9b4fe778692c66a7c02adc7 377 Pfam PF13439 Glycosyltransferase Family 4 14 178 6.9E-28 T 14-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 GYO_2473 831632ffd9b4fe778692c66a7c02adc7 377 SUPERFAMILY SSF53756 9 373 1.61E-87 T 14-10-2018 GYO_2473 831632ffd9b4fe778692c66a7c02adc7 377 TIGRFAM TIGR03999 thiol_BshA: N-acetyl-alpha-D-glucosaminyl L-malate synthase BshA 4 374 6.4E-178 T 14-10-2018 IPR023881 N-acetyl-alpha-D-glucosaminyl L-malate synthase BshA GO:0016757|GO:0071793 GYO_2473 831632ffd9b4fe778692c66a7c02adc7 377 Gene3D G3DSA:3.40.50.2000 176 357 1.2E-137 T 14-10-2018 GYO_2473 831632ffd9b4fe778692c66a7c02adc7 377 Gene3D G3DSA:3.40.50.2000 14 368 1.2E-137 T 14-10-2018 GYO_2473 831632ffd9b4fe778692c66a7c02adc7 377 Pfam PF00534 Glycosyl transferases group 1 188 350 3.6E-44 T 14-10-2018 IPR001296 Glycosyl transferase, family 1 GYO_0813 a4311ab1dcea07dca245d52efc96b701 542 Pfam PF00005 ABC transporter 99 132 1.3E-5 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 GYO_0813 a4311ab1dcea07dca245d52efc96b701 542 Gene3D G3DSA:3.40.50.300 83 226 5.5E-32 T 14-10-2018 GYO_0813 a4311ab1dcea07dca245d52efc96b701 542 SUPERFAMILY SSF52540 274 482 1.86E-41 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase GYO_0813 a4311ab1dcea07dca245d52efc96b701 542 Pfam PF00005 ABC transporter 21 74 5.4E-12 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 GYO_0813 a4311ab1dcea07dca245d52efc96b701 542 SMART SM00382 29 186 2.2E-13 T 14-10-2018 IPR003593 AAA+ ATPase domain GYO_0813 a4311ab1dcea07dca245d52efc96b701 542 SMART SM00382 316 508 1.0E-14 T 14-10-2018 IPR003593 AAA+ ATPase domain GYO_0813 a4311ab1dcea07dca245d52efc96b701 542 Pfam PF00005 ABC transporter 308 435 1.7E-24 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 GYO_0813 a4311ab1dcea07dca245d52efc96b701 542 Pfam PF12848 ABC transporter 172 269 3.6E-9 T 14-10-2018 IPR032781 ABC-transporter extension domain GYO_0813 a4311ab1dcea07dca245d52efc96b701 542 SUPERFAMILY SSF52540 4 205 4.55E-40 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase GYO_0813 a4311ab1dcea07dca245d52efc96b701 542 Gene3D G3DSA:3.40.50.300 1 82 7.5E-14 T 14-10-2018 GYO_0813 a4311ab1dcea07dca245d52efc96b701 542 Gene3D G3DSA:3.40.50.300 234 510 1.1E-49 T 14-10-2018 GYO_0169 1baa13158e4e9c2d62c114194e6679e9 120 Hamap MF_01368 50S ribosomal protein L17 [rplQ]. 1 120 29.088 T 14-10-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 GYO_0169 1baa13158e4e9c2d62c114194e6679e9 120 ProSitePatterns PS01167 Ribosomal protein L17 signature. 30 52 - T 14-10-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 GYO_0169 1baa13158e4e9c2d62c114194e6679e9 120 Gene3D G3DSA:3.90.1030.10 1 120 6.4E-51 T 14-10-2018 IPR036373 Ribosomal protein L17 superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 GYO_0169 1baa13158e4e9c2d62c114194e6679e9 120 TIGRFAM TIGR00059 L17: ribosomal protein bL17 2 120 3.1E-50 T 14-10-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 GYO_0169 1baa13158e4e9c2d62c114194e6679e9 120 SUPERFAMILY SSF64263 2 120 8.24E-46 T 14-10-2018 IPR036373 Ribosomal protein L17 superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 GYO_0169 1baa13158e4e9c2d62c114194e6679e9 120 Pfam PF01196 Ribosomal protein L17 16 120 5.1E-40 T 14-10-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 GYO_2036 4ea99401d7315430ee8e2851b3a74022 65 Pfam PF14035 YlzJ-like protein 1 61 3.5E-19 T 14-10-2018 IPR025619 YlzJ-like protein GYO_1359 a5fbff8ecff75d5046213ccfd0c0fa50 441 SUPERFAMILY SSF53383 82 436 7.93E-88 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase GYO_1359 a5fbff8ecff75d5046213ccfd0c0fa50 441 PIRSF PIRSF000390 44 439 1.3E-131 T 14-10-2018 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase GYO_1359 a5fbff8ecff75d5046213ccfd0c0fa50 441 Gene3D G3DSA:3.40.640.10 1 309 4.7E-104 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 GYO_1359 a5fbff8ecff75d5046213ccfd0c0fa50 441 Pfam PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family 82 431 8.2E-116 T 14-10-2018 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase GYO_1359 a5fbff8ecff75d5046213ccfd0c0fa50 441 Gene3D G3DSA:3.90.1150.10 311 441 4.8E-32 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 GYO_2142 af2f9826b839497602caee247c18d2ca 267 SUPERFAMILY SSF55961 6 153 5.49E-5 T 14-10-2018 GYO_2959 bfd116065fcb879eaa34f780c7e30224 266 ProSitePatterns PS01006 Formate and nitrite transporters signature 2. 162 172 - T 14-10-2018 IPR024002 Formate/nitrite transporter, conserved site GYO_2959 bfd116065fcb879eaa34f780c7e30224 266 Gene3D G3DSA:1.20.1080.10 4 263 4.7E-88 T 14-10-2018 IPR023271 Aquaporin-like Reactome: R-HSA-432047 GYO_2959 bfd116065fcb879eaa34f780c7e30224 266 TIGRFAM TIGR00790 fnt: formate/nitrite transporter 20 254 1.6E-81 T 14-10-2018 IPR000292 Formate/nitrite transporter GO:0016020|GO:0022857|GO:0055085 GYO_2959 bfd116065fcb879eaa34f780c7e30224 266 ProSitePatterns PS01005 Formate and nitrite transporters signature 1. 77 86 - T 14-10-2018 IPR024002 Formate/nitrite transporter, conserved site GYO_2959 bfd116065fcb879eaa34f780c7e30224 266 Pfam PF01226 Formate/nitrite transporter 8 249 8.6E-81 T 14-10-2018 IPR000292 Formate/nitrite transporter GO:0016020|GO:0022857|GO:0055085 GYO_4356 5dc7fdd08b66165684bdb645aeee404c 249 ProSitePatterns PS00211 ABC transporters family signature. 140 154 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 GYO_4356 5dc7fdd08b66165684bdb645aeee404c 249 SMART SM00382 26 216 5.1E-16 T 14-10-2018 IPR003593 AAA+ ATPase domain GYO_4356 5dc7fdd08b66165684bdb645aeee404c 249 SUPERFAMILY SSF52540 1 238 2.66E-75 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase GYO_4356 5dc7fdd08b66165684bdb645aeee404c 249 PIRSF PIRSF039085 1 244 1.4E-100 T 14-10-2018 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 GYO_4356 5dc7fdd08b66165684bdb645aeee404c 249 Gene3D G3DSA:3.40.50.300 1 248 7.4E-78 T 14-10-2018 GYO_4356 5dc7fdd08b66165684bdb645aeee404c 249 Pfam PF00005 ABC transporter 17 168 1.8E-34 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 GYO_0782 69c580e0074250ef730f6ab2d9668a79 440 TIGRFAM TIGR00796 livcs: branched-chain amino acid transport system II carrier protein 14 421 7.7E-161 T 14-10-2018 IPR004685 Branched-chain amino acid transport system II carrier protein GO:0015658|GO:0015803|GO:0016021 GYO_0782 69c580e0074250ef730f6ab2d9668a79 440 Pfam PF05525 Branched-chain amino acid transport protein 8 434 6.5E-165 T 14-10-2018 IPR004685 Branched-chain amino acid transport system II carrier protein GO:0015658|GO:0015803|GO:0016021 GYO_2499 97ce009771a03c3fa20de793d38be268 256 Gene3D G3DSA:3.40.50.150 66 256 3.8E-72 T 14-10-2018 GYO_2499 97ce009771a03c3fa20de793d38be268 256 PRINTS PR00996 Glutamate methyltransferase family signature 96 116 1.0E-41 T 14-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 GYO_2499 97ce009771a03c3fa20de793d38be268 256 PRINTS PR00996 Glutamate methyltransferase family signature 214 237 1.0E-41 T 14-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 GYO_2499 97ce009771a03c3fa20de793d38be268 256 PRINTS PR00996 Glutamate methyltransferase family signature 128 144 1.0E-41 T 14-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 GYO_2499 97ce009771a03c3fa20de793d38be268 256 PRINTS PR00996 Glutamate methyltransferase family signature 195 209 1.0E-41 T 14-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 GYO_2499 97ce009771a03c3fa20de793d38be268 256 PRINTS PR00996 Glutamate methyltransferase family signature 60 72 1.0E-41 T 14-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 GYO_2499 97ce009771a03c3fa20de793d38be268 256 PRINTS PR00996 Glutamate methyltransferase family signature 23 36 1.0E-41 T 14-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 GYO_2499 97ce009771a03c3fa20de793d38be268 256 Pfam PF03705 CheR methyltransferase, all-alpha domain 7 53 1.6E-10 T 14-10-2018 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal GYO_2499 97ce009771a03c3fa20de793d38be268 256 SMART SM00138 1 254 2.7E-130 T 14-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 GYO_2499 97ce009771a03c3fa20de793d38be268 256 SUPERFAMILY SSF47757 3 66 1.31E-9 T 14-10-2018 GYO_2499 97ce009771a03c3fa20de793d38be268 256 SUPERFAMILY SSF53335 67 251 1.12E-50 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase GYO_2499 97ce009771a03c3fa20de793d38be268 256 Pfam PF01739 CheR methyltransferase, SAM binding domain 67 250 2.0E-66 T 14-10-2018 IPR022642 MCP methyltransferase, CheR-type, SAM-binding domain, C-terminal GYO_4289 7a431d4bd9f113b51c8dbdf5bb916cf1 213 Pfam PF11611 Domain of unknown function (DUF4352) 79 208 1.2E-16 T 14-10-2018 IPR029051 Domain of unknown function DUF4352 GYO_4289 7a431d4bd9f113b51c8dbdf5bb916cf1 213 Gene3D G3DSA:2.60.40.1240 72 213 1.1E-46 T 14-10-2018 IPR029050 Immunoprotective extracellular, immunoglobulin-like domain superfamily GYO_0422 2afdce3594538eba3aaf1105658bfd79 384 SUPERFAMILY SSF52440 4 104 7.48E-31 T 14-10-2018 IPR016185 Pre-ATP-grasp domain superfamily GYO_0422 2afdce3594538eba3aaf1105658bfd79 384 Gene3D G3DSA:3.40.50.20 1 114 1.2E-49 T 14-10-2018 GYO_0422 2afdce3594538eba3aaf1105658bfd79 384 SUPERFAMILY SSF56059 113 377 2.3E-57 T 14-10-2018 GYO_0422 2afdce3594538eba3aaf1105658bfd79 384 Pfam PF02222 ATP-grasp domain 115 286 1.1E-59 T 14-10-2018 IPR003135 ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type GYO_0422 2afdce3594538eba3aaf1105658bfd79 384 Gene3D G3DSA:3.30.1490.20 115 188 6.6E-31 T 14-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 GYO_0422 2afdce3594538eba3aaf1105658bfd79 384 TIGRFAM TIGR01142 purT: phosphoribosylglycinamide formyltransferase 2 6 384 1.5E-192 T 14-10-2018 IPR005862 Formate-dependent phosphoribosylglycinamide formyltransferase GO:0000287|GO:0004644|GO:0005524|GO:0009152|GO:0016742 GYO_0422 2afdce3594538eba3aaf1105658bfd79 384 Hamap MF_01643 Formate-dependent phosphoribosylglycinamide formyltransferase [purT]. 1 384 51.684 T 14-10-2018 IPR005862 Formate-dependent phosphoribosylglycinamide formyltransferase GO:0000287|GO:0004644|GO:0005524|GO:0009152|GO:0016742 GYO_0422 2afdce3594538eba3aaf1105658bfd79 384 Gene3D G3DSA:3.30.470.20 189 383 1.6E-58 T 14-10-2018 GYO_0505 29fa6f50d48be38b117f5df11d481542 383 SUPERFAMILY SSF55031 173 283 1.36E-21 T 14-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain GYO_0505 29fa6f50d48be38b117f5df11d481542 383 Pfam PF07687 Peptidase dimerisation domain 177 267 1.2E-11 T 14-10-2018 IPR011650 Peptidase M20, dimerisation domain GYO_0505 29fa6f50d48be38b117f5df11d481542 383 SUPERFAMILY SSF53187 3 372 3.14E-66 T 14-10-2018 GYO_0505 29fa6f50d48be38b117f5df11d481542 383 Pfam PF01546 Peptidase family M20/M25/M40 69 368 4.2E-25 T 14-10-2018 IPR002933 Peptidase M20 GO:0016787 GYO_0505 29fa6f50d48be38b117f5df11d481542 383 PIRSF PIRSF005962 1 375 6.3E-112 T 14-10-2018 IPR017439 Amidohydrolase GO:0016787 GYO_0505 29fa6f50d48be38b117f5df11d481542 383 TIGRFAM TIGR01891 amidohydrolases: amidohydrolase 13 358 3.6E-112 T 14-10-2018 IPR017439 Amidohydrolase GO:0016787 GYO_0505 29fa6f50d48be38b117f5df11d481542 383 Gene3D G3DSA:3.40.630.10 13 356 7.5E-90 T 14-10-2018 GYO_0505 29fa6f50d48be38b117f5df11d481542 383 Gene3D G3DSA:3.30.70.360 169 281 7.5E-90 T 14-10-2018 GYO_2219 739844fadc192fb0b1d7e6741edec641 271 Hamap MF_01925 Pyrroline-5-carboxylate reductase [proC]. 1 255 22.552 T 14-10-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 GYO_2219 739844fadc192fb0b1d7e6741edec641 271 Gene3D G3DSA:3.40.50.720 1 152 2.0E-38 T 14-10-2018 GYO_2219 739844fadc192fb0b1d7e6741edec641 271 SUPERFAMILY SSF48179 150 258 2.21E-32 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 GYO_2219 739844fadc192fb0b1d7e6741edec641 271 Pfam PF14748 Pyrroline-5-carboxylate reductase dimerisation 151 254 1.6E-33 T 14-10-2018 IPR029036 Pyrroline-5-carboxylate reductase, dimerisation domain KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 GYO_2219 739844fadc192fb0b1d7e6741edec641 271 ProSitePatterns PS00521 Delta 1-pyrroline-5-carboxylate reductase signature. 211 233 - T 14-10-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 GYO_2219 739844fadc192fb0b1d7e6741edec641 271 Pfam PF03807 NADP oxidoreductase coenzyme F420-dependent 1 88 4.0E-16 T 14-10-2018 IPR028939 Pyrroline-5-carboxylate reductase, catalytic, N-terminal GYO_2219 739844fadc192fb0b1d7e6741edec641 271 SUPERFAMILY SSF51735 1 148 5.91E-22 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily GYO_2219 739844fadc192fb0b1d7e6741edec641 271 TIGRFAM TIGR00112 proC: pyrroline-5-carboxylate reductase 1 255 2.9E-84 T 14-10-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 GYO_2219 739844fadc192fb0b1d7e6741edec641 271 PIRSF PIRSF000193 1 258 3.1E-71 T 14-10-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 GYO_2219 739844fadc192fb0b1d7e6741edec641 271 Gene3D G3DSA:1.10.3730.10 153 260 4.0E-37 T 14-10-2018 GYO_2992 079fae33b453deb31ee39e370ef16642 422 SUPERFAMILY SSF48019 238 420 3.91E-73 T 14-10-2018 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: R-HSA-110312|Reactome: R-HSA-110314|Reactome: R-HSA-110320|Reactome: R-HSA-174411|Reactome: R-HSA-5651801|Reactome: R-HSA-5655862|Reactome: R-HSA-5656121|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-69091 GYO_2992 079fae33b453deb31ee39e370ef16642 422 Gene3D G3DSA:1.20.272.10 228 331 6.1E-43 T 14-10-2018 GYO_2992 079fae33b453deb31ee39e370ef16642 422 Gene3D G3DSA:3.40.50.300 1 148 3.3E-38 T 14-10-2018 GYO_2992 079fae33b453deb31ee39e370ef16642 422 Gene3D G3DSA:1.10.3710.10 332 422 1.1E-25 T 14-10-2018 GYO_2992 079fae33b453deb31ee39e370ef16642 422 Pfam PF05496 Holliday junction DNA helicase ruvB N-terminus 8 126 3.5E-15 T 14-10-2018 IPR008824 Holliday junction DNA helicase ruvB, N-terminal GO:0006281|GO:0006310|GO:0009378 GYO_2992 079fae33b453deb31ee39e370ef16642 422 Pfam PF12002 MgsA AAA+ ATPase C terminal 253 417 1.4E-67 T 14-10-2018 IPR021886 MgsA AAA+ ATPase C-terminal GYO_2992 079fae33b453deb31ee39e370ef16642 422 SMART SM00382 38 150 3.4E-10 T 14-10-2018 IPR003593 AAA+ ATPase domain GYO_2992 079fae33b453deb31ee39e370ef16642 422 Pfam PF16193 AAA C-terminal domain 173 252 1.3E-27 T 14-10-2018 IPR032423 AAA C-terminal domain GYO_2992 079fae33b453deb31ee39e370ef16642 422 Gene3D G3DSA:1.10.8.60 150 225 1.8E-19 T 14-10-2018 GYO_2992 079fae33b453deb31ee39e370ef16642 422 SUPERFAMILY SSF52540 3 230 6.62E-40 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase GYO_3864 cac39820644b3c18ab45b7dbff628a35 480 Pfam PF03572 Peptidase family S41 214 374 1.9E-49 T 14-10-2018 IPR005151 Tail specific protease GO:0006508|GO:0008236 Reactome: R-HSA-2187335|Reactome: R-HSA-2453902 GYO_3864 cac39820644b3c18ab45b7dbff628a35 480 SMART SM00245 185 376 9.2E-84 T 14-10-2018 IPR005151 Tail specific protease GO:0006508|GO:0008236 Reactome: R-HSA-2187335|Reactome: R-HSA-2453902 GYO_3864 cac39820644b3c18ab45b7dbff628a35 480 SUPERFAMILY SSF50156 83 202 7.1E-23 T 14-10-2018 IPR036034 PDZ superfamily GO:0005515 GYO_3864 cac39820644b3c18ab45b7dbff628a35 480 SUPERFAMILY SSF47090 385 457 6.28E-15 T 14-10-2018 IPR036365 PGBD-like superfamily GYO_3864 cac39820644b3c18ab45b7dbff628a35 480 Pfam PF13180 PDZ domain 113 189 1.6E-13 T 14-10-2018 IPR001478 PDZ domain GO:0005515 GYO_3864 cac39820644b3c18ab45b7dbff628a35 480 SUPERFAMILY SSF52096 45 381 4.8E-71 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily GYO_3864 cac39820644b3c18ab45b7dbff628a35 480 Gene3D G3DSA:2.30.42.10 112 199 4.1E-90 T 14-10-2018 GYO_3864 cac39820644b3c18ab45b7dbff628a35 480 Gene3D G3DSA:1.10.101.10 385 465 4.0E-14 T 14-10-2018 IPR036366 PGBD superfamily Reactome: R-HSA-1442490|Reactome: R-HSA-1474228 GYO_3864 cac39820644b3c18ab45b7dbff628a35 480 Pfam PF01471 Putative peptidoglycan binding domain 398 453 2.0E-12 T 14-10-2018 IPR002477 Peptidoglycan binding-like GYO_3864 cac39820644b3c18ab45b7dbff628a35 480 Gene3D G3DSA:3.30.750.44 60 351 4.1E-90 T 14-10-2018 GYO_3864 cac39820644b3c18ab45b7dbff628a35 480 TIGRFAM TIGR00225 prc: C-terminal processing peptidase 64 400 4.8E-134 T 14-10-2018 IPR004447 C-terminal-processing peptidase S41A GO:0006508|GO:0008236 GYO_3864 cac39820644b3c18ab45b7dbff628a35 480 Gene3D G3DSA:3.90.226.10 200 373 4.1E-90 T 14-10-2018 GYO_3864 cac39820644b3c18ab45b7dbff628a35 480 SMART SM00228 112 183 5.8E-17 T 14-10-2018 IPR001478 PDZ domain GO:0005515 GYO_2888 28eadb2ff09ffe683d3242df876af7db 68 SUPERFAMILY SSF55008 1 68 7.46E-21 T 14-10-2018 IPR036163 Heavy metal-associated domain superfamily GO:0030001|GO:0046872 GYO_2888 28eadb2ff09ffe683d3242df876af7db 68 Pfam PF00403 Heavy-metal-associated domain 5 66 1.1E-16 T 14-10-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 GYO_2888 28eadb2ff09ffe683d3242df876af7db 68 Gene3D G3DSA:3.30.70.100 1 68 2.9E-24 T 14-10-2018 GYO_2888 28eadb2ff09ffe683d3242df876af7db 68 ProSitePatterns PS01047 Heavy-metal-associated domain. 8 37 - T 14-10-2018 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 GYO_2888 28eadb2ff09ffe683d3242df876af7db 68 PRINTS PR00944 Copper ion binding protein signature 54 67 3.8E-11 T 14-10-2018 IPR000428 Copper ion binding protein GO:0005507|GO:0006825 GYO_2888 28eadb2ff09ffe683d3242df876af7db 68 PRINTS PR00944 Copper ion binding protein signature 15 28 3.8E-11 T 14-10-2018 IPR000428 Copper ion binding protein GO:0005507|GO:0006825 GYO_2888 28eadb2ff09ffe683d3242df876af7db 68 PRINTS PR00944 Copper ion binding protein signature 28 41 3.8E-11 T 14-10-2018 IPR000428 Copper ion binding protein GO:0005507|GO:0006825 GYO_2888 28eadb2ff09ffe683d3242df876af7db 68 PRINTS PR00944 Copper ion binding protein signature 3 15 3.8E-11 T 14-10-2018 IPR000428 Copper ion binding protein GO:0005507|GO:0006825 GYO_2888 28eadb2ff09ffe683d3242df876af7db 68 TIGRFAM TIGR00003 TIGR00003: copper ion binding protein 3 68 7.8E-25 T 14-10-2018 IPR006122 Heavy metal-associated domain, copper ion-binding GO:0005507 Reactome: R-HSA-936837 GYO_0461 bf7dd31f6bf35eb38e1ec78a3deac3eb 243 Pfam PF10138 vWA found in TerF C terminus 24 221 8.3E-77 T 14-10-2018 IPR019303 vWA found in TerF C terminus GYO_0461 bf7dd31f6bf35eb38e1ec78a3deac3eb 243 SMART SM00327 24 194 5.3E-6 T 14-10-2018 IPR002035 von Willebrand factor, type A GYO_0461 bf7dd31f6bf35eb38e1ec78a3deac3eb 243 SUPERFAMILY SSF53300 26 178 8.26E-10 T 14-10-2018 IPR036465 von Willebrand factor A-like domain superfamily GYO_1617 3686b3f0b98b531d6cda6e6b9389c958 366 SUPERFAMILY SSF54826 1 125 7.07E-35 T 14-10-2018 GYO_1617 3686b3f0b98b531d6cda6e6b9389c958 366 SUPERFAMILY SSF51604 126 355 7.99E-70 T 14-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily GYO_1617 3686b3f0b98b531d6cda6e6b9389c958 366 Gene3D G3DSA:3.30.390.10 1 120 5.0E-34 T 14-10-2018 IPR029017 Enolase-like, N-terminal GYO_1617 3686b3f0b98b531d6cda6e6b9389c958 366 Pfam PF13378 Enolase C-terminal domain-like 143 355 1.7E-53 T 14-10-2018 IPR029065 Enolase C-terminal domain-like GYO_1617 3686b3f0b98b531d6cda6e6b9389c958 366 SMART SM00922 141 240 1.1E-28 T 14-10-2018 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal GYO_1617 3686b3f0b98b531d6cda6e6b9389c958 366 Pfam PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain 7 124 8.9E-21 T 14-10-2018 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain GYO_1617 3686b3f0b98b531d6cda6e6b9389c958 366 Gene3D G3DSA:3.20.20.120 121 366 1.1E-85 T 14-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily GYO_1036 e0eb3b953101da8559b5993cbc750e3e 249 Pfam PF00557 Metallopeptidase family M24 11 240 6.3E-41 T 14-10-2018 IPR000994 Peptidase M24 GYO_1036 e0eb3b953101da8559b5993cbc750e3e 249 Hamap MF_01974 Methionine aminopeptidase [map]. 1 249 35.35 T 14-10-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 GYO_1036 e0eb3b953101da8559b5993cbc750e3e 249 Gene3D G3DSA:3.90.230.10 1 249 8.2E-82 T 14-10-2018 GYO_1036 e0eb3b953101da8559b5993cbc750e3e 249 TIGRFAM TIGR00500 met_pdase_I: methionine aminopeptidase, type I 1 248 3.0E-102 T 14-10-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 GYO_1036 e0eb3b953101da8559b5993cbc750e3e 249 SUPERFAMILY SSF55920 2 248 6.67E-66 T 14-10-2018 IPR036005 Creatinase/aminopeptidase-like GYO_1036 e0eb3b953101da8559b5993cbc750e3e 249 PRINTS PR00599 Methionine aminopeptidase-1 signature 66 79 1.4E-17 T 14-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 GYO_1036 e0eb3b953101da8559b5993cbc750e3e 249 PRINTS PR00599 Methionine aminopeptidase-1 signature 89 105 1.4E-17 T 14-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 GYO_1036 e0eb3b953101da8559b5993cbc750e3e 249 PRINTS PR00599 Methionine aminopeptidase-1 signature 191 203 1.4E-17 T 14-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 GYO_1036 e0eb3b953101da8559b5993cbc750e3e 249 PRINTS PR00599 Methionine aminopeptidase-1 signature 159 171 1.4E-17 T 14-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 GYO_2694 0641c0aa62ccc4f3bde3a1a36ca010a0 450 Gene3D G3DSA:3.30.470.130 1 448 4.1E-201 T 14-10-2018 GYO_2694 0641c0aa62ccc4f3bde3a1a36ca010a0 450 TIGRFAM TIGR00514 accC: acetyl-CoA carboxylase, biotin carboxylase subunit 1 449 1.8E-251 T 14-10-2018 IPR004549 Acetyl-CoA carboxylase, biotin carboxylase GO:0016874 GYO_2694 0641c0aa62ccc4f3bde3a1a36ca010a0 450 SUPERFAMILY SSF51246 332 445 1.67E-46 T 14-10-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 GYO_2694 0641c0aa62ccc4f3bde3a1a36ca010a0 450 SMART SM00878 337 443 5.1E-69 T 14-10-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 GYO_2694 0641c0aa62ccc4f3bde3a1a36ca010a0 450 SUPERFAMILY SSF56059 83 351 8.13E-73 T 14-10-2018 GYO_2694 0641c0aa62ccc4f3bde3a1a36ca010a0 450 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 287 294 - T 14-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 GYO_2694 0641c0aa62ccc4f3bde3a1a36ca010a0 450 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 116 323 9.5E-84 T 14-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 GYO_2694 0641c0aa62ccc4f3bde3a1a36ca010a0 450 Pfam PF02785 Biotin carboxylase C-terminal domain 337 443 7.0E-43 T 14-10-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 GYO_2694 0641c0aa62ccc4f3bde3a1a36ca010a0 450 Pfam PF00289 Biotin carboxylase, N-terminal domain 1 110 1.4E-47 T 14-10-2018 IPR005481 Biotin carboxylase-like, N-terminal domain Reactome: R-HSA-196780|Reactome: R-HSA-3371599 GYO_2694 0641c0aa62ccc4f3bde3a1a36ca010a0 450 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 153 167 - T 14-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 GYO_2694 0641c0aa62ccc4f3bde3a1a36ca010a0 450 SUPERFAMILY SSF52440 1 113 4.46E-51 T 14-10-2018 IPR016185 Pre-ATP-grasp domain superfamily GYO_3561 e7f837ca2dbf9bc93ec45b691966a5c7 328 PIRSF PIRSF009290 2 328 2.2E-91 T 14-10-2018 IPR024713 Fructosamine deglycase FrlB GYO_3561 e7f837ca2dbf9bc93ec45b691966a5c7 328 Gene3D G3DSA:3.40.50.10490 1 155 2.0E-46 T 14-10-2018 GYO_3561 e7f837ca2dbf9bc93ec45b691966a5c7 328 Gene3D G3DSA:3.40.50.12570 193 286 4.2E-66 T 14-10-2018 GYO_3561 e7f837ca2dbf9bc93ec45b691966a5c7 328 SUPERFAMILY SSF53697 15 328 1.3E-58 T 14-10-2018 GYO_3561 e7f837ca2dbf9bc93ec45b691966a5c7 328 Pfam PF01380 SIS domain 25 130 1.5E-13 T 14-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 GYO_3561 e7f837ca2dbf9bc93ec45b691966a5c7 328 Gene3D G3DSA:1.10.10.2240 158 310 4.2E-66 T 14-10-2018 GYO_4462 7c2c137a48c1e61dce3f90eaa65b42e7 454 SUPERFAMILY SSF52540 183 433 2.66E-55 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase GYO_4462 7c2c137a48c1e61dce3f90eaa65b42e7 454 Gene3D G3DSA:3.40.50.300 167 454 8.0E-122 T 14-10-2018 GYO_4462 7c2c137a48c1e61dce3f90eaa65b42e7 454 SUPERFAMILY SSF48024 8 119 6.02E-38 T 14-10-2018 IPR036185 DNA helicase, DnaB-like, N-terminal domain superfamily GO:0003678|GO:0005524|GO:0006260 GYO_4462 7c2c137a48c1e61dce3f90eaa65b42e7 454 TIGRFAM TIGR00665 DnaB: replicative DNA helicase 9 442 5.4E-189 T 14-10-2018 IPR007692 DNA helicase, DnaB type GO:0003677|GO:0003678|GO:0005524|GO:0006260 GYO_4462 7c2c137a48c1e61dce3f90eaa65b42e7 454 Pfam PF00772 DnaB-like helicase N terminal domain 10 111 4.1E-35 T 14-10-2018 IPR007693 DNA helicase, DnaB-like, N-terminal GO:0003678|GO:0005524|GO:0006260 GYO_4462 7c2c137a48c1e61dce3f90eaa65b42e7 454 SMART SM00382 202 391 0.0032 T 14-10-2018 IPR003593 AAA+ ATPase domain GYO_4462 7c2c137a48c1e61dce3f90eaa65b42e7 454 Pfam PF03796 DnaB-like helicase C terminal domain 185 440 7.3E-120 T 14-10-2018 IPR007694 DNA helicase, DnaB-like, C-terminal GO:0003678|GO:0005524|GO:0006260 Reactome: R-HSA-2151201 GYO_4462 7c2c137a48c1e61dce3f90eaa65b42e7 454 Gene3D G3DSA:1.10.860.10 1 166 2.2E-65 T 14-10-2018 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal GYO_1274 53a375276237b7902aeefe44fd8528c6 288 TIGRFAM TIGR00099 Cof-subfamily: Cof-like hydrolase 6 266 1.4E-44 T 14-10-2018 IPR000150 Cof family GO:0016787 GYO_1274 53a375276237b7902aeefe44fd8528c6 288 Pfam PF08282 haloacid dehalogenase-like hydrolase 7 266 3.0E-54 T 14-10-2018 GYO_1274 53a375276237b7902aeefe44fd8528c6 288 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 6 240 2.6E-16 T 14-10-2018 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: R-HSA-446205 GYO_1274 53a375276237b7902aeefe44fd8528c6 288 SUPERFAMILY SSF56784 3 272 2.52E-55 T 14-10-2018 IPR036412 HAD-like superfamily GYO_1274 53a375276237b7902aeefe44fd8528c6 288 Gene3D G3DSA:3.40.50.1000 5 264 2.3E-93 T 14-10-2018 IPR023214 HAD superfamily GYO_1274 53a375276237b7902aeefe44fd8528c6 288 Gene3D G3DSA:3.30.1240.10 83 195 2.3E-93 T 14-10-2018 GYO_4064 fc67c3d231d8ecb8f9d721afb9abcc5f 209 Pfam PF14681 Uracil phosphoribosyltransferase 6 208 6.6E-76 T 14-10-2018 GYO_4064 fc67c3d231d8ecb8f9d721afb9abcc5f 209 Gene3D G3DSA:3.40.50.2020 1 209 3.1E-83 T 14-10-2018 GYO_4064 fc67c3d231d8ecb8f9d721afb9abcc5f 209 TIGRFAM TIGR01091 upp: uracil phosphoribosyltransferase 3 209 9.9E-94 T 14-10-2018 IPR005765 Uracil phosphoribosyl transferase GO:0004845|GO:0006223 KEGG: 00240+2.4.2.9|MetaCyc: PWY-7183 GYO_4064 fc67c3d231d8ecb8f9d721afb9abcc5f 209 Hamap MF_01218_B Uracil phosphoribosyltransferase [upp]. 3 209 48.251 T 14-10-2018 IPR034332 Uracil phosphoribosyltransferase, bacterial-type KEGG: 00240+2.4.2.9|MetaCyc: PWY-7183 GYO_4064 fc67c3d231d8ecb8f9d721afb9abcc5f 209 SUPERFAMILY SSF53271 4 207 2.1E-72 T 14-10-2018 IPR029057 Phosphoribosyltransferase-like GYO_3987 4ef9b454dd3e829af420af30b413c202 248 Pfam PF13807 G-rich domain on putative tyrosine kinase 143 194 1.4E-6 T 14-10-2018 IPR032807 Tyrosine kinase, G-rich domain GYO_3987 4ef9b454dd3e829af420af30b413c202 248 Pfam PF02706 Chain length determinant protein 5 93 1.5E-23 T 14-10-2018 IPR003856 Polysaccharide chain length determinant N-terminal domain GO:0009103|GO:0016020 GYO_0048 7cd4988dee59857748cebc63b1a9d50f 255 ProSitePatterns PS01090 TatD deoxyribonuclease family signature 2. 124 134 - T 14-10-2018 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 GYO_0048 7cd4988dee59857748cebc63b1a9d50f 255 SUPERFAMILY SSF51556 1 254 4.32E-99 T 14-10-2018 IPR032466 Metal-dependent hydrolase GYO_0048 7cd4988dee59857748cebc63b1a9d50f 255 ProSitePatterns PS01091 TatD deoxyribonuclease family signature 3. 189 205 - T 14-10-2018 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 GYO_0048 7cd4988dee59857748cebc63b1a9d50f 255 PIRSF PIRSF005902 1 255 8.2E-93 T 14-10-2018 IPR001130 TatD family GO:0016788 GYO_0048 7cd4988dee59857748cebc63b1a9d50f 255 ProSitePatterns PS01137 TatD deoxyribonuclease family signature 1. 2 10 - T 14-10-2018 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 GYO_0048 7cd4988dee59857748cebc63b1a9d50f 255 TIGRFAM TIGR00010 TIGR00010: hydrolase, TatD family 2 253 1.2E-105 T 14-10-2018 IPR015991 Uncharacterised hydrolase TatD-type GO:0004536 GYO_0048 7cd4988dee59857748cebc63b1a9d50f 255 Gene3D G3DSA:3.20.20.140 1 255 5.5E-114 T 14-10-2018 GYO_0048 7cd4988dee59857748cebc63b1a9d50f 255 Pfam PF01026 TatD related DNase 3 252 3.8E-91 T 14-10-2018 IPR001130 TatD family GO:0016788 GYO_1597 798b718c37e2539eb421eeab0a5d3a88 297 SUPERFAMILY SSF55846 1 153 1.26E-48 T 14-10-2018 IPR036505 N-acetylmuramoyl-L-alanine amidase/PGRP domain superfamily GO:0008745|GO:0009253 Reactome: R-HSA-6803157 GYO_1597 798b718c37e2539eb421eeab0a5d3a88 297 Gene3D G3DSA:3.10.350.10 156 211 6.9E-20 T 14-10-2018 IPR036779 LysM domain superfamily GYO_1597 798b718c37e2539eb421eeab0a5d3a88 297 Pfam PF01510 N-acetylmuramoyl-L-alanine amidase 24 140 1.5E-23 T 14-10-2018 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 Reactome: R-HSA-6803157 GYO_1597 798b718c37e2539eb421eeab0a5d3a88 297 SMART SM00644 11 153 5.9E-36 T 14-10-2018 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 Reactome: R-HSA-6803157 GYO_1597 798b718c37e2539eb421eeab0a5d3a88 297 SUPERFAMILY SSF47090 224 292 1.49E-16 T 14-10-2018 IPR036365 PGBD-like superfamily GYO_1597 798b718c37e2539eb421eeab0a5d3a88 297 Gene3D G3DSA:3.40.80.10 1 154 7.9E-57 T 14-10-2018 IPR036505 N-acetylmuramoyl-L-alanine amidase/PGRP domain superfamily GO:0008745|GO:0009253 Reactome: R-HSA-6803157 GYO_1597 798b718c37e2539eb421eeab0a5d3a88 297 Gene3D G3DSA:1.10.101.10 222 296 7.5E-18 T 14-10-2018 IPR036366 PGBD superfamily Reactome: R-HSA-1442490|Reactome: R-HSA-1474228 GYO_1597 798b718c37e2539eb421eeab0a5d3a88 297 Pfam PF01471 Putative peptidoglycan binding domain 231 291 9.8E-17 T 14-10-2018 IPR002477 Peptidoglycan binding-like GYO_1597 798b718c37e2539eb421eeab0a5d3a88 297 Pfam PF01476 LysM domain 161 203 4.2E-16 T 14-10-2018 IPR018392 LysM domain GYO_1597 798b718c37e2539eb421eeab0a5d3a88 297 SUPERFAMILY SSF54106 159 203 2.09E-13 T 14-10-2018 GYO_1597 798b718c37e2539eb421eeab0a5d3a88 297 SMART SM00257 160 204 9.0E-19 T 14-10-2018 IPR018392 LysM domain GYO_2315 7b9de6bd70a25a2624c8786e85ba3cb3 165 SUPERFAMILY SSF55729 100 151 2.66E-6 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase GYO_2315 7b9de6bd70a25a2624c8786e85ba3cb3 165 Gene3D G3DSA:3.40.630.30 9 159 7.5E-7 T 14-10-2018 GYO_1425 76251edc0ec8e62b108f471c3681132b 258 PIRSF PIRSF000728 1 255 6.3E-87 T 14-10-2018 IPR004662 Acetylglutamate kinase family GO:0005737 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400 GYO_1425 76251edc0ec8e62b108f471c3681132b 258 TIGRFAM TIGR00761 argB: acetylglutamate kinase 4 232 1.9E-89 T 14-10-2018 IPR004662 Acetylglutamate kinase family GO:0005737 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400 GYO_1425 76251edc0ec8e62b108f471c3681132b 258 Hamap MF_00082 Acetylglutamate kinase [argB]. 2 250 39.753 T 14-10-2018 IPR037528 Acetylglutamate kinase ArgB GO:0003991|GO:0006526 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400 GYO_1425 76251edc0ec8e62b108f471c3681132b 258 Pfam PF00696 Amino acid kinase family 3 234 2.0E-44 T 14-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 GYO_1425 76251edc0ec8e62b108f471c3681132b 258 Gene3D G3DSA:3.40.1160.10 1 239 1.4E-75 T 14-10-2018 IPR036393 Acetylglutamate kinase-like superfamily GYO_1425 76251edc0ec8e62b108f471c3681132b 258 PRINTS PR00474 Glutamate 5-kinase family signature 126 147 2.8E-5 T 14-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 GYO_1425 76251edc0ec8e62b108f471c3681132b 258 PRINTS PR00474 Glutamate 5-kinase family signature 32 46 2.8E-5 T 14-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 GYO_1425 76251edc0ec8e62b108f471c3681132b 258 PRINTS PR00474 Glutamate 5-kinase family signature 158 185 2.8E-5 T 14-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 GYO_1425 76251edc0ec8e62b108f471c3681132b 258 SUPERFAMILY SSF53633 1 252 2.49E-65 T 14-10-2018 IPR036393 Acetylglutamate kinase-like superfamily GYO_2652 3aecc93a400d58cea5c782f7208309a7 363 ProSitePatterns PS01075 Acetate and butyrate kinases family signature 1. 10 21 - T 14-10-2018 IPR023865 Aliphatic acid kinase, short-chain, conserved site GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 GYO_2652 3aecc93a400d58cea5c782f7208309a7 363 Hamap MF_00542 Probable butyrate kinase [buk]. 1 363 171.971 T 14-10-2018 IPR011245 Butyrate kinase GO:0005524|GO:0005737|GO:0016310|GO:0047761 KEGG: 00650+2.7.2.7 GYO_2652 3aecc93a400d58cea5c782f7208309a7 363 PIRSF PIRSF036458 6 361 3.8E-178 T 14-10-2018 IPR011245 Butyrate kinase GO:0005524|GO:0005737|GO:0016310|GO:0047761 KEGG: 00650+2.7.2.7 GYO_2652 3aecc93a400d58cea5c782f7208309a7 363 ProSitePatterns PS01076 Acetate and butyrate kinases family signature 2. 184 201 - T 14-10-2018 IPR023865 Aliphatic acid kinase, short-chain, conserved site GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 GYO_2652 3aecc93a400d58cea5c782f7208309a7 363 TIGRFAM TIGR02707 butyr_kinase: butyrate kinase 9 359 1.6E-181 T 14-10-2018 IPR011245 Butyrate kinase GO:0005524|GO:0005737|GO:0016310|GO:0047761 KEGG: 00650+2.7.2.7 GYO_2652 3aecc93a400d58cea5c782f7208309a7 363 Gene3D G3DSA:3.30.420.40 9 360 2.3E-158 T 14-10-2018 GYO_2652 3aecc93a400d58cea5c782f7208309a7 363 SUPERFAMILY SSF53067 9 177 3.5E-73 T 14-10-2018 GYO_2652 3aecc93a400d58cea5c782f7208309a7 363 Pfam PF00871 Acetokinase family 10 350 1.0E-71 T 14-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 GYO_2652 3aecc93a400d58cea5c782f7208309a7 363 PRINTS PR00471 Acetate kinase family signature 184 205 1.2E-14 T 14-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 GYO_2652 3aecc93a400d58cea5c782f7208309a7 363 PRINTS PR00471 Acetate kinase family signature 10 21 1.2E-14 T 14-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 GYO_2652 3aecc93a400d58cea5c782f7208309a7 363 PRINTS PR00471 Acetate kinase family signature 279 292 1.2E-14 T 14-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 GYO_2652 3aecc93a400d58cea5c782f7208309a7 363 PRINTS PR00471 Acetate kinase family signature 302 318 1.2E-14 T 14-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 GYO_2652 3aecc93a400d58cea5c782f7208309a7 363 SUPERFAMILY SSF53067 122 351 6.2E-56 T 14-10-2018 GYO_2652 3aecc93a400d58cea5c782f7208309a7 363 Gene3D G3DSA:3.30.420.40 142 337 2.3E-158 T 14-10-2018 GYO_0309 43a6fa09df36b3d363af4a2c0978ffb8 130 Pfam PF11436 Protein of unknown function (DUF3199) 2 128 4.4E-53 T 14-10-2018 IPR013514 Protein of unknown function DUF3199, YqbG GYO_0309 43a6fa09df36b3d363af4a2c0978ffb8 130 SUPERFAMILY SSF116915 2 130 7.32E-51 T 14-10-2018 IPR036558 YqbG-like superfamily GYO_0309 43a6fa09df36b3d363af4a2c0978ffb8 130 Gene3D G3DSA:1.10.3230.10 1 130 9.2E-53 T 14-10-2018 IPR036558 YqbG-like superfamily GYO_0230 43a6fa09df36b3d363af4a2c0978ffb8 130 Pfam PF11436 Protein of unknown function (DUF3199) 2 128 4.4E-53 T 14-10-2018 IPR013514 Protein of unknown function DUF3199, YqbG GYO_0230 43a6fa09df36b3d363af4a2c0978ffb8 130 SUPERFAMILY SSF116915 2 130 7.32E-51 T 14-10-2018 IPR036558 YqbG-like superfamily GYO_0230 43a6fa09df36b3d363af4a2c0978ffb8 130 Gene3D G3DSA:1.10.3230.10 1 130 9.2E-53 T 14-10-2018 IPR036558 YqbG-like superfamily GYO_4271 9df4caf9fa81cd089a1b991725d3340c 178 Pfam PF04542 Sigma-70 region 2 24 91 4.0E-13 T 14-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 GYO_4271 9df4caf9fa81cd089a1b991725d3340c 178 SUPERFAMILY SSF88946 2 102 2.88E-26 T 14-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 GYO_4271 9df4caf9fa81cd089a1b991725d3340c 178 Gene3D G3DSA:1.10.1740.10 2 115 1.5E-24 T 14-10-2018 GYO_4271 9df4caf9fa81cd089a1b991725d3340c 178 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 19 174 2.8E-24 T 14-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 GYO_4271 9df4caf9fa81cd089a1b991725d3340c 178 SUPERFAMILY SSF88659 115 176 5.79E-13 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like GYO_4271 9df4caf9fa81cd089a1b991725d3340c 178 Gene3D G3DSA:1.10.10.10 116 178 3.2E-16 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily GYO_4271 9df4caf9fa81cd089a1b991725d3340c 178 ProSitePatterns PS01063 Sigma-70 factors ECF subfamily signature. 46 77 - T 14-10-2018 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 GYO_4271 9df4caf9fa81cd089a1b991725d3340c 178 Pfam PF08281 Sigma-70, region 4 122 170 3.6E-12 T 14-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 GYO_1219 8149e41dc86948f88e571b892862f240 581 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 139 153 1.1E-6 T 14-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 GYO_1219 8149e41dc86948f88e571b892862f240 581 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 296 311 1.1E-6 T 14-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 GYO_1219 8149e41dc86948f88e571b892862f240 581 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 324 451 1.0E-23 T 14-10-2018 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 GYO_1219 8149e41dc86948f88e571b892862f240 581 Gene3D G3DSA:3.40.120.10 34 189 2.2E-48 T 14-10-2018 GYO_1219 8149e41dc86948f88e571b892862f240 581 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 504 550 8.9E-10 T 14-10-2018 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 GYO_1219 8149e41dc86948f88e571b892862f240 581 SUPERFAMILY SSF55957 447 573 8.37E-16 T 14-10-2018 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 GYO_1219 8149e41dc86948f88e571b892862f240 581 Gene3D G3DSA:3.30.310.50 468 573 2.6E-9 T 14-10-2018 GYO_1219 8149e41dc86948f88e571b892862f240 581 SUPERFAMILY SSF53738 30 225 1.61E-47 T 14-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 GYO_1219 8149e41dc86948f88e571b892862f240 581 SUPERFAMILY SSF53738 304 455 1.37E-32 T 14-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 GYO_1219 8149e41dc86948f88e571b892862f240 581 Gene3D G3DSA:3.40.120.10 209 324 3.6E-22 T 14-10-2018 GYO_1219 8149e41dc86948f88e571b892862f240 581 SUPERFAMILY SSF53738 209 315 1.18E-19 T 14-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 GYO_1219 8149e41dc86948f88e571b892862f240 581 ProSitePatterns PS00710 Phosphoglucomutase and phosphomannomutase phosphoserine signature. 140 149 - T 14-10-2018 IPR016066 Alpha-D-phosphohexomutase, conserved site GO:0000287 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 GYO_1219 8149e41dc86948f88e571b892862f240 581 Gene3D G3DSA:3.40.120.10 325 452 4.0E-36 T 14-10-2018 GYO_1219 8149e41dc86948f88e571b892862f240 581 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 210 315 8.2E-23 T 14-10-2018 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 GYO_1219 8149e41dc86948f88e571b892862f240 581 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 43 182 1.5E-43 T 14-10-2018 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 GYO_2076 56202f3cfee8caa21e8d76176c1845cb 5507 Gene3D G3DSA:3.40.47.10 2605 3207 9.1E-248 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 GYO_2076 56202f3cfee8caa21e8d76176c1845cb 5507 SUPERFAMILY SSF47336 1011 1131 7.33E-17 T 14-10-2018 IPR036736 ACP-like superfamily GYO_2076 56202f3cfee8caa21e8d76176c1845cb 5507 Gene3D G3DSA:3.40.50.12780 488 898 2.9E-136 T 14-10-2018 GYO_2076 56202f3cfee8caa21e8d76176c1845cb 5507 Gene3D G3DSA:3.30.559.30 212 463 1.6E-108 T 14-10-2018 GYO_2076 56202f3cfee8caa21e8d76176c1845cb 5507 Gene3D G3DSA:3.30.559.10 34 408 1.6E-108 T 14-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 GYO_2076 56202f3cfee8caa21e8d76176c1845cb 5507 SUPERFAMILY SSF53901 1115 1541 4.52E-72 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 GYO_2076 56202f3cfee8caa21e8d76176c1845cb 5507 Pfam PF00501 AMP-binding enzyme 499 906 4.0E-106 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 GYO_2076 56202f3cfee8caa21e8d76176c1845cb 5507 Gene3D G3DSA:3.10.129.110 3239 3518 8.0E-78 T 14-10-2018 GYO_2076 56202f3cfee8caa21e8d76176c1845cb 5507 Gene3D G3DSA:3.10.129.110 4733 5011 7.9E-83 T 14-10-2018 GYO_2076 56202f3cfee8caa21e8d76176c1845cb 5507 Gene3D G3DSA:3.10.129.110 1733 2022 1.2E-66 T 14-10-2018 GYO_2076 56202f3cfee8caa21e8d76176c1845cb 5507 SUPERFAMILY SSF52777 215 489 2.0E-46 T 14-10-2018 GYO_2076 56202f3cfee8caa21e8d76176c1845cb 5507 ProSitePatterns PS00012 Phosphopantetheine attachment site. 1040 1055 - T 14-10-2018 IPR006162 Phosphopantetheine attachment site GYO_2076 56202f3cfee8caa21e8d76176c1845cb 5507 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 4354 4476 1.7E-39 T 14-10-2018 IPR014031 Beta-ketoacyl synthase, C-terminal GYO_2076 56202f3cfee8caa21e8d76176c1845cb 5507 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 2859 2982 1.3E-39 T 14-10-2018 IPR014031 Beta-ketoacyl synthase, C-terminal GYO_2076 56202f3cfee8caa21e8d76176c1845cb 5507 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 1374 1492 2.0E-39 T 14-10-2018 IPR014031 Beta-ketoacyl synthase, C-terminal GYO_2076 56202f3cfee8caa21e8d76176c1845cb 5507 Gene3D G3DSA:3.30.300.30 899 1005 2.3E-30 T 14-10-2018 GYO_2076 56202f3cfee8caa21e8d76176c1845cb 5507 Gene3D G3DSA:3.40.47.10 1119 1709 8.4E-200 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 GYO_2076 56202f3cfee8caa21e8d76176c1845cb 5507 Pfam PF00550 Phosphopantetheine attachment site 1017 1081 4.8E-14 T 14-10-2018 IPR009081 Phosphopantetheine binding ACP domain GYO_2076 56202f3cfee8caa21e8d76176c1845cb 5507 Pfam PF00550 Phosphopantetheine attachment site 2483 2547 3.7E-12 T 14-10-2018 IPR009081 Phosphopantetheine binding ACP domain GYO_2076 56202f3cfee8caa21e8d76176c1845cb 5507 Pfam PF00550 Phosphopantetheine attachment site 3982 4048 1.3E-15 T 14-10-2018 IPR009081 Phosphopantetheine binding ACP domain GYO_2076 56202f3cfee8caa21e8d76176c1845cb 5507 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 1117 1366 6.2E-61 T 14-10-2018 IPR014030 Beta-ketoacyl synthase, N-terminal GYO_2076 56202f3cfee8caa21e8d76176c1845cb 5507 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 2603 2851 4.9E-91 T 14-10-2018 IPR014030 Beta-ketoacyl synthase, N-terminal GYO_2076 56202f3cfee8caa21e8d76176c1845cb 5507 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 4100 4346 3.5E-86 T 14-10-2018 IPR014030 Beta-ketoacyl synthase, N-terminal GYO_2076 56202f3cfee8caa21e8d76176c1845cb 5507 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 4259 4275 - T 14-10-2018 IPR018201 Beta-ketoacyl synthase, active site GYO_2076 56202f3cfee8caa21e8d76176c1845cb 5507 Gene3D G3DSA:1.10.1200.10 3973 4057 1.3E-22 T 14-10-2018 IPR036736 ACP-like superfamily GYO_2076 56202f3cfee8caa21e8d76176c1845cb 5507 Gene3D G3DSA:1.10.1200.10 2472 2556 3.3E-20 T 14-10-2018 IPR036736 ACP-like superfamily GYO_2076 56202f3cfee8caa21e8d76176c1845cb 5507 SMART SM01294 3982 4048 1.2E-7 T 14-10-2018 GYO_2076 56202f3cfee8caa21e8d76176c1845cb 5507 SMART SM01294 2481 2547 3.0E-5 T 14-10-2018 GYO_2076 56202f3cfee8caa21e8d76176c1845cb 5507 Pfam PF00668 Condensation domain 32 479 1.1E-105 T 14-10-2018 IPR001242 Condensation domain GYO_2076 56202f3cfee8caa21e8d76176c1845cb 5507 SUPERFAMILY SSF52777 35 208 8.67E-38 T 14-10-2018 GYO_2076 56202f3cfee8caa21e8d76176c1845cb 5507 SMART SM00825 Beta-ketoacyl synthase 1119 1545 6.1E-146 T 14-10-2018 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain GYO_2076 56202f3cfee8caa21e8d76176c1845cb 5507 SMART SM00825 Beta-ketoacyl synthase 4102 4537 2.3E-187 T 14-10-2018 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain GYO_2076 56202f3cfee8caa21e8d76176c1845cb 5507 SMART SM00825 Beta-ketoacyl synthase 2605 3041 4.4E-194 T 14-10-2018 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain GYO_2076 56202f3cfee8caa21e8d76176c1845cb 5507 Gene3D G3DSA:3.40.47.10 4102 4704 1.3E-239 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 GYO_2076 56202f3cfee8caa21e8d76176c1845cb 5507 Pfam PF16197 Ketoacyl-synthetase C-terminal extension 2986 3095 7.6E-13 T 14-10-2018 IPR032821 Ketoacyl-synthetase, C-terminal extension Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 GYO_2076 56202f3cfee8caa21e8d76176c1845cb 5507 Pfam PF16197 Ketoacyl-synthetase C-terminal extension 4482 4596 6.3E-12 T 14-10-2018 IPR032821 Ketoacyl-synthetase, C-terminal extension Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 GYO_2076 56202f3cfee8caa21e8d76176c1845cb 5507 Pfam PF16197 Ketoacyl-synthetase C-terminal extension 1495 1607 6.9E-14 T 14-10-2018 IPR032821 Ketoacyl-synthetase, C-terminal extension Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 GYO_2076 56202f3cfee8caa21e8d76176c1845cb 5507 SUPERFAMILY SSF53901 2601 3033 9.87E-90 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 GYO_2076 56202f3cfee8caa21e8d76176c1845cb 5507 SUPERFAMILY SSF51735 5235 5462 1.16E-29 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily GYO_2076 56202f3cfee8caa21e8d76176c1845cb 5507 SUPERFAMILY SSF47336 2478 2617 2.62E-14 T 14-10-2018 IPR036736 ACP-like superfamily GYO_2076 56202f3cfee8caa21e8d76176c1845cb 5507 SMART SM00826 4727 4892 1.2E-15 T 14-10-2018 IPR020807 Polyketide synthase, dehydratase domain Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 GYO_2076 56202f3cfee8caa21e8d76176c1845cb 5507 SMART SM00826 1726 1891 2.8E-4 T 14-10-2018 IPR020807 Polyketide synthase, dehydratase domain Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 GYO_2076 56202f3cfee8caa21e8d76176c1845cb 5507 SMART SM00826 3233 3399 6.1E-17 T 14-10-2018 IPR020807 Polyketide synthase, dehydratase domain Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 GYO_2076 56202f3cfee8caa21e8d76176c1845cb 5507 SUPERFAMILY SSF51735 2200 2440 8.24E-40 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily GYO_2076 56202f3cfee8caa21e8d76176c1845cb 5507 ProSitePatterns PS00455 Putative AMP-binding domain signature. 645 656 - T 14-10-2018 IPR020845 AMP-binding, conserved site GYO_2076 56202f3cfee8caa21e8d76176c1845cb 5507 SUPERFAMILY SSF53901 4097 4531 4.05E-89 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 GYO_2076 56202f3cfee8caa21e8d76176c1845cb 5507 Pfam PF13193 AMP-binding enzyme C-terminal domain 915 989 5.3E-9 T 14-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain GYO_2076 56202f3cfee8caa21e8d76176c1845cb 5507 Gene3D G3DSA:3.30.70.3050 3092 3188 9.1E-248 T 14-10-2018 GYO_2076 56202f3cfee8caa21e8d76176c1845cb 5507 Gene3D G3DSA:3.30.70.3050 4590 4685 1.3E-239 T 14-10-2018 GYO_2076 56202f3cfee8caa21e8d76176c1845cb 5507 Pfam PF14765 Polyketide synthase dehydratase 1726 2017 4.7E-45 T 14-10-2018 IPR020807 Polyketide synthase, dehydratase domain Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 GYO_2076 56202f3cfee8caa21e8d76176c1845cb 5507 Pfam PF14765 Polyketide synthase dehydratase 4727 5007 6.3E-66 T 14-10-2018 IPR020807 Polyketide synthase, dehydratase domain Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 GYO_2076 56202f3cfee8caa21e8d76176c1845cb 5507 Pfam PF14765 Polyketide synthase dehydratase 3233 3515 1.0E-58 T 14-10-2018 IPR020807 Polyketide synthase, dehydratase domain Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 GYO_2076 56202f3cfee8caa21e8d76176c1845cb 5507 Gene3D G3DSA:3.40.50.720 5015 5474 1.4E-81 T 14-10-2018 GYO_2076 56202f3cfee8caa21e8d76176c1845cb 5507 Pfam PF08659 KR domain 2205 2390 3.9E-54 T 14-10-2018 IPR013968 Polyketide synthase, ketoreductase domain Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 GYO_2076 56202f3cfee8caa21e8d76176c1845cb 5507 Pfam PF08659 KR domain 3706 3891 4.1E-55 T 14-10-2018 IPR013968 Polyketide synthase, ketoreductase domain Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 GYO_2076 56202f3cfee8caa21e8d76176c1845cb 5507 Pfam PF08659 KR domain 5238 5416 5.8E-42 T 14-10-2018 IPR013968 Polyketide synthase, ketoreductase domain Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 GYO_2076 56202f3cfee8caa21e8d76176c1845cb 5507 Gene3D G3DSA:3.30.70.3050 1601 1698 8.4E-200 T 14-10-2018 GYO_2076 56202f3cfee8caa21e8d76176c1845cb 5507 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 2764 2780 - T 14-10-2018 IPR018201 Beta-ketoacyl synthase, active site GYO_2076 56202f3cfee8caa21e8d76176c1845cb 5507 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 520 929 3.9E-128 T 14-10-2018 IPR010071 Amino acid adenylation domain GYO_2076 56202f3cfee8caa21e8d76176c1845cb 5507 Gene3D G3DSA:3.40.50.720 3524 3948 5.8E-146 T 14-10-2018 GYO_2076 56202f3cfee8caa21e8d76176c1845cb 5507 Gene3D G3DSA:3.40.50.720 2024 2447 2.8E-150 T 14-10-2018 GYO_2076 56202f3cfee8caa21e8d76176c1845cb 5507 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 3706 3892 5.1E-48 T 14-10-2018 GYO_2076 56202f3cfee8caa21e8d76176c1845cb 5507 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 5238 5418 2.5E-38 T 14-10-2018 GYO_2076 56202f3cfee8caa21e8d76176c1845cb 5507 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 2205 2391 6.4E-50 T 14-10-2018 GYO_2076 56202f3cfee8caa21e8d76176c1845cb 5507 SUPERFAMILY SSF51735 3701 3945 1.58E-34 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily GYO_2076 56202f3cfee8caa21e8d76176c1845cb 5507 SUPERFAMILY SSF47336 3978 4113 2.09E-18 T 14-10-2018 IPR036736 ACP-like superfamily GYO_2076 56202f3cfee8caa21e8d76176c1845cb 5507 SMART SM00823 Phosphopantetheine attachment site 2480 2551 4.0E-14 T 14-10-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 GYO_2076 56202f3cfee8caa21e8d76176c1845cb 5507 SMART SM00823 Phosphopantetheine attachment site 3981 4052 1.9E-17 T 14-10-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 GYO_2076 56202f3cfee8caa21e8d76176c1845cb 5507 SMART SM00823 Phosphopantetheine attachment site 1016 1085 7.9E-6 T 14-10-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 GYO_2076 56202f3cfee8caa21e8d76176c1845cb 5507 SUPERFAMILY SSF56801 456 1029 1.11E-154 T 14-10-2018 GYO_2076 56202f3cfee8caa21e8d76176c1845cb 5507 SUPERFAMILY SSF51735 5026 5224 9.05E-14 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily GYO_2076 56202f3cfee8caa21e8d76176c1845cb 5507 Gene3D G3DSA:1.10.1200.10 1006 1089 5.5E-19 T 14-10-2018 IPR036736 ACP-like superfamily GYO_1753 872d815bd99ced2a5b35aab053b93f86 236 Gene3D G3DSA:2.160.10.10 85 236 2.8E-50 T 14-10-2018 GYO_1753 872d815bd99ced2a5b35aab053b93f86 236 Pfam PF08503 Tetrahydrodipicolinate succinyltransferase N-terminal 4 87 8.4E-37 T 14-10-2018 IPR013710 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase, N-terminal GO:0047200 KEGG: 00300+2.3.1.89|MetaCyc: PWY-2941 GYO_1753 872d815bd99ced2a5b35aab053b93f86 236 Gene3D G3DSA:3.30.70.250 1 84 4.5E-37 T 14-10-2018 GYO_1753 872d815bd99ced2a5b35aab053b93f86 236 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 174 202 - T 14-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 GYO_1753 872d815bd99ced2a5b35aab053b93f86 236 TIGRFAM TIGR03532 DapD_Ac: 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase 6 236 4.6E-119 T 14-10-2018 IPR019873 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase, DapH GO:0009089|GO:0047200 KEGG: 00300+2.3.1.89|MetaCyc: PWY-2941 GYO_1753 872d815bd99ced2a5b35aab053b93f86 236 SUPERFAMILY SSF51161 90 223 1.04E-48 T 14-10-2018 IPR011004 Trimeric LpxA-like superfamily GYO_1753 872d815bd99ced2a5b35aab053b93f86 236 Hamap MF_01691 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase [dapH]. 1 235 45.437 T 14-10-2018 IPR019873 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase, DapH GO:0009089|GO:0047200 KEGG: 00300+2.3.1.89|MetaCyc: PWY-2941 GYO_1753 872d815bd99ced2a5b35aab053b93f86 236 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 91 118 3.5E-4 T 14-10-2018 IPR001451 Hexapeptide repeat GYO_1753 872d815bd99ced2a5b35aab053b93f86 236 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 121 156 2.4E-10 T 14-10-2018 IPR001451 Hexapeptide repeat GYO_1753 872d815bd99ced2a5b35aab053b93f86 236 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 165 198 2.6E-8 T 14-10-2018 IPR001451 Hexapeptide repeat GYO_3999 cb6339dfca88b6c63b2208b655e01933 358 SUPERFAMILY SSF46894 133 228 7.94E-13 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 GYO_3999 cb6339dfca88b6c63b2208b655e01933 358 SMART SM00448 1 112 3.6E-20 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 GYO_3999 cb6339dfca88b6c63b2208b655e01933 358 Pfam PF00486 Transcriptional regulatory protein, C terminal 159 226 2.5E-7 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 GYO_3999 cb6339dfca88b6c63b2208b655e01933 358 Pfam PF00072 Response regulator receiver domain 4 112 6.7E-22 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 GYO_3999 cb6339dfca88b6c63b2208b655e01933 358 Gene3D G3DSA:1.10.10.10 127 230 2.0E-14 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily GYO_3999 cb6339dfca88b6c63b2208b655e01933 358 SUPERFAMILY SSF52172 2 125 7.97E-28 T 14-10-2018 IPR011006 CheY-like superfamily GYO_3999 cb6339dfca88b6c63b2208b655e01933 358 SMART SM00862 152 228 1.6E-5 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 GYO_3999 cb6339dfca88b6c63b2208b655e01933 358 Gene3D G3DSA:3.40.50.2300 1 126 2.2E-29 T 14-10-2018 GYO_1600 5a2b64b5b73359458ed18043243407d2 248 Gene3D G3DSA:3.30.70.2720 128 248 1.7E-48 T 14-10-2018 GYO_1600 5a2b64b5b73359458ed18043243407d2 248 ProDom PD120066 SPORULATION STAGE SA II SPOIISA TRANSMEMBRANE MEMBRANE KILLER 1 247 2.0E-138 T 14-10-2018 GYO_1600 5a2b64b5b73359458ed18043243407d2 248 Gene3D G3DSA:1.20.5.460 92 127 3.1E-25 T 14-10-2018 GYO_1600 5a2b64b5b73359458ed18043243407d2 248 Pfam PF14171 Toxin SpoIISA, type II toxin-antitoxin system 3 238 7.5E-96 T 14-10-2018 IPR025940 Toxin SpoIISA, type II toxin-antitoxin system GO:0009405|GO:0016021 GYO_3663 16fa6aa81979899354926fbc4adb7370 803 SUPERFAMILY SSF55008 4 71 7.72E-21 T 14-10-2018 IPR036163 Heavy metal-associated domain superfamily GO:0030001|GO:0046872 GYO_3663 16fa6aa81979899354926fbc4adb7370 803 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 269 781 2.4E-95 T 14-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 GYO_3663 16fa6aa81979899354926fbc4adb7370 803 Pfam PF00403 Heavy-metal-associated domain 10 69 2.0E-19 T 14-10-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 GYO_3663 16fa6aa81979899354926fbc4adb7370 803 Pfam PF00403 Heavy-metal-associated domain 77 137 1.4E-16 T 14-10-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 GYO_3663 16fa6aa81979899354926fbc4adb7370 803 Pfam PF00702 haloacid dehalogenase-like hydrolase 495 711 1.7E-47 T 14-10-2018 GYO_3663 16fa6aa81979899354926fbc4adb7370 803 Pfam PF00122 E1-E2 ATPase 296 477 4.8E-60 T 14-10-2018 GYO_3663 16fa6aa81979899354926fbc4adb7370 803 TIGRFAM TIGR00003 TIGR00003: copper ion binding protein 8 70 2.9E-12 T 14-10-2018 IPR006122 Heavy metal-associated domain, copper ion-binding GO:0005507 Reactome: R-HSA-936837 GYO_3663 16fa6aa81979899354926fbc4adb7370 803 TIGRFAM TIGR00003 TIGR00003: copper ion binding protein 74 138 4.0E-11 T 14-10-2018 IPR006122 Heavy metal-associated domain, copper ion-binding GO:0005507 Reactome: R-HSA-936837 GYO_3663 16fa6aa81979899354926fbc4adb7370 803 Gene3D G3DSA:3.30.70.100 1 71 1.9E-25 T 14-10-2018 GYO_3663 16fa6aa81979899354926fbc4adb7370 803 Gene3D G3DSA:3.30.70.100 72 148 9.2E-23 T 14-10-2018 GYO_3663 16fa6aa81979899354926fbc4adb7370 803 PRINTS PR00942 Copper-transporting ATPase 1 signature 192 212 6.1E-19 T 14-10-2018 GYO_3663 16fa6aa81979899354926fbc4adb7370 803 PRINTS PR00942 Copper-transporting ATPase 1 signature 32 55 6.1E-19 T 14-10-2018 GYO_3663 16fa6aa81979899354926fbc4adb7370 803 PRINTS PR00942 Copper-transporting ATPase 1 signature 212 237 6.1E-19 T 14-10-2018 GYO_3663 16fa6aa81979899354926fbc4adb7370 803 PRINTS PR00942 Copper-transporting ATPase 1 signature 6 31 6.1E-19 T 14-10-2018 GYO_3663 16fa6aa81979899354926fbc4adb7370 803 Gene3D G3DSA:3.40.50.1000 479 749 6.2E-93 T 14-10-2018 IPR023214 HAD superfamily GYO_3663 16fa6aa81979899354926fbc4adb7370 803 SUPERFAMILY SSF56784 496 797 1.33E-59 T 14-10-2018 IPR036412 HAD-like superfamily GYO_3663 16fa6aa81979899354926fbc4adb7370 803 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 500 506 - T 14-10-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 GYO_3663 16fa6aa81979899354926fbc4adb7370 803 ProSitePatterns PS01047 Heavy-metal-associated domain. 11 40 - T 14-10-2018 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 GYO_3663 16fa6aa81979899354926fbc4adb7370 803 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 498 512 5.2E-27 T 14-10-2018 GYO_3663 16fa6aa81979899354926fbc4adb7370 803 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 622 633 5.2E-27 T 14-10-2018 GYO_3663 16fa6aa81979899354926fbc4adb7370 803 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 644 654 5.2E-27 T 14-10-2018 GYO_3663 16fa6aa81979899354926fbc4adb7370 803 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 346 360 5.2E-27 T 14-10-2018 GYO_3663 16fa6aa81979899354926fbc4adb7370 803 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 720 732 5.2E-27 T 14-10-2018 GYO_3663 16fa6aa81979899354926fbc4adb7370 803 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 697 716 5.2E-27 T 14-10-2018 GYO_3663 16fa6aa81979899354926fbc4adb7370 803 Gene3D G3DSA:3.40.1110.10 509 629 6.2E-93 T 14-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 GYO_3663 16fa6aa81979899354926fbc4adb7370 803 ProSitePatterns PS01047 Heavy-metal-associated domain. 79 108 - T 14-10-2018 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 GYO_3663 16fa6aa81979899354926fbc4adb7370 803 SUPERFAMILY SSF81653 300 396 1.7E-29 T 14-10-2018 IPR008250 P-type ATPase, A domain superfamily Reactome: R-HSA-936837 GYO_3663 16fa6aa81979899354926fbc4adb7370 803 SUPERFAMILY SSF81665 254 765 3.53E-13 T 14-10-2018 IPR023298 P-type ATPase, transmembrane domain superfamily Reactome: R-HSA-936837 GYO_3663 16fa6aa81979899354926fbc4adb7370 803 Gene3D G3DSA:2.70.150.20 289 401 1.8E-43 T 14-10-2018 GYO_3663 16fa6aa81979899354926fbc4adb7370 803 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 229 799 5.5E-200 T 14-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 GYO_3663 16fa6aa81979899354926fbc4adb7370 803 SUPERFAMILY SSF55008 73 143 1.17E-20 T 14-10-2018 IPR036163 Heavy metal-associated domain superfamily GO:0030001|GO:0046872 GYO_3663 16fa6aa81979899354926fbc4adb7370 803 TIGRFAM TIGR01511 ATPase-IB1_Cu: copper-translocating P-type ATPase 210 800 9.2E-185 T 14-10-2018 GYO_3806 4a4071656b192c8f4f04a0f88cbe9b8a 237 SMART SM00862 152 227 5.7E-21 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 GYO_3806 4a4071656b192c8f4f04a0f88cbe9b8a 237 Pfam PF00486 Transcriptional regulatory protein, C terminal 154 227 8.7E-25 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 GYO_3806 4a4071656b192c8f4f04a0f88cbe9b8a 237 SUPERFAMILY SSF52172 2 125 3.98E-34 T 14-10-2018 IPR011006 CheY-like superfamily GYO_3806 4a4071656b192c8f4f04a0f88cbe9b8a 237 Gene3D G3DSA:1.10.10.10 130 236 6.1E-28 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily GYO_3806 4a4071656b192c8f4f04a0f88cbe9b8a 237 SUPERFAMILY SSF46894 128 228 1.08E-25 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 GYO_3806 4a4071656b192c8f4f04a0f88cbe9b8a 237 Pfam PF00072 Response regulator receiver domain 4 112 4.6E-21 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 GYO_3806 4a4071656b192c8f4f04a0f88cbe9b8a 237 Gene3D G3DSA:3.40.50.2300 2 124 4.4E-31 T 14-10-2018 GYO_3806 4a4071656b192c8f4f04a0f88cbe9b8a 237 SMART SM00448 2 112 6.6E-34 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 GYO_3067 4299267009efcd21c05e154b831d6e9f 424 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 160 239 6.8E-15 T 14-10-2018 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain GYO_3067 4299267009efcd21c05e154b831d6e9f 424 Hamap MF_00303 Trigger factor [tig]. 1 424 23.705 T 14-10-2018 IPR005215 Trigger factor GO:0015031 GYO_3067 4299267009efcd21c05e154b831d6e9f 424 SUPERFAMILY SSF102735 1 129 8.24E-39 T 14-10-2018 IPR036611 Trigger factor ribosome-binding domain superfamily GO:0006457|GO:0015031 GYO_3067 4299267009efcd21c05e154b831d6e9f 424 Gene3D G3DSA:3.10.50.40 151 248 2.7E-96 T 14-10-2018 GYO_3067 4299267009efcd21c05e154b831d6e9f 424 Gene3D G3DSA:1.10.3120.10 115 423 2.7E-96 T 14-10-2018 IPR037041 Trigger factor, C-terminal domain superfamily GO:0006457|GO:0015031 GYO_3067 4299267009efcd21c05e154b831d6e9f 424 Gene3D G3DSA:3.30.70.1050 3 114 6.7E-32 T 14-10-2018 IPR036611 Trigger factor ribosome-binding domain superfamily GO:0006457|GO:0015031 GYO_3067 4299267009efcd21c05e154b831d6e9f 424 TIGRFAM TIGR00115 tig: trigger factor 12 421 6.3E-144 T 14-10-2018 IPR005215 Trigger factor GO:0015031 GYO_3067 4299267009efcd21c05e154b831d6e9f 424 SUPERFAMILY SSF54534 89 243 2.95E-37 T 14-10-2018 GYO_3067 4299267009efcd21c05e154b831d6e9f 424 SUPERFAMILY SSF109998 250 423 1.44E-43 T 14-10-2018 IPR027304 Trigger factor/SurA domain superfamily GYO_3067 4299267009efcd21c05e154b831d6e9f 424 Pfam PF05697 Bacterial trigger factor protein (TF) 1 144 6.8E-45 T 14-10-2018 IPR008881 Trigger factor, ribosome-binding, bacterial GO:0006457|GO:0015031 GYO_3067 4299267009efcd21c05e154b831d6e9f 424 PIRSF PIRSF003095 1 424 3.9E-137 T 14-10-2018 IPR005215 Trigger factor GO:0015031 GYO_3067 4299267009efcd21c05e154b831d6e9f 424 Pfam PF05698 Bacterial trigger factor protein (TF) C-terminus 264 422 3.4E-48 T 14-10-2018 IPR008880 Trigger factor, C-terminal GO:0006457|GO:0015031 GYO_2688 c5038c995a53872aa4c8a7d45a97478d 296 Gene3D G3DSA:1.10.600.10 2 296 1.9E-106 T 14-10-2018 IPR008949 Isoprenoid synthase domain superfamily GYO_2688 c5038c995a53872aa4c8a7d45a97478d 296 ProSitePatterns PS00723 Polyprenyl synthases signature 1. 82 98 - T 14-10-2018 IPR033749 Polyprenyl synthetase, conserved site GYO_2688 c5038c995a53872aa4c8a7d45a97478d 296 SUPERFAMILY SSF48576 7 276 4.16E-85 T 14-10-2018 IPR008949 Isoprenoid synthase domain superfamily GYO_2688 c5038c995a53872aa4c8a7d45a97478d 296 ProSitePatterns PS00444 Polyprenyl synthases signature 2. 215 227 - T 14-10-2018 IPR033749 Polyprenyl synthetase, conserved site GYO_2688 c5038c995a53872aa4c8a7d45a97478d 296 Pfam PF00348 Polyprenyl synthetase 32 268 1.7E-59 T 14-10-2018 IPR000092 Polyprenyl synthetase GO:0008299 GYO_1503 fce428139d5d8de9089280b90bccd70a 648 SUPERFAMILY SSF55804 508 646 2.88E-29 T 14-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 GYO_1503 fce428139d5d8de9089280b90bccd70a 648 SUPERFAMILY SSF52794 408 489 1.41E-8 T 14-10-2018 IPR036095 PTS system IIB component-like superfamily GO:0008982|GO:0009401 GYO_1503 fce428139d5d8de9089280b90bccd70a 648 Gene3D G3DSA:1.10.10.10 1 154 2.4E-13 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily GYO_1503 fce428139d5d8de9089280b90bccd70a 648 Gene3D G3DSA:1.10.1790.10 190 288 1.0E-12 T 14-10-2018 GYO_1503 fce428139d5d8de9089280b90bccd70a 648 Gene3D G3DSA:1.10.1790.10 302 399 4.4E-21 T 14-10-2018 GYO_1503 fce428139d5d8de9089280b90bccd70a 648 SUPERFAMILY SSF63520 304 400 2.35E-21 T 14-10-2018 IPR036634 PRD domain superfamily GO:0006355 GYO_1503 fce428139d5d8de9089280b90bccd70a 648 Pfam PF05043 Mga helix-turn-helix domain 105 164 8.1E-6 T 14-10-2018 IPR007737 Mga helix-turn-helix domain GYO_1503 fce428139d5d8de9089280b90bccd70a 648 Pfam PF00874 PRD domain 200 283 1.5E-15 T 14-10-2018 IPR011608 PRD domain GO:0006355 GYO_1503 fce428139d5d8de9089280b90bccd70a 648 Pfam PF00874 PRD domain 309 397 3.5E-20 T 14-10-2018 IPR011608 PRD domain GO:0006355 GYO_1503 fce428139d5d8de9089280b90bccd70a 648 ProSitePatterns PS00372 PTS EIIA domains phosphorylation site signature 2. 555 571 - T 14-10-2018 IPR002178 PTS EIIA type-2 domain GYO_1503 fce428139d5d8de9089280b90bccd70a 648 SUPERFAMILY SSF63520 192 284 1.12E-17 T 14-10-2018 IPR036634 PRD domain superfamily GO:0006355 GYO_1503 fce428139d5d8de9089280b90bccd70a 648 Gene3D G3DSA:3.40.930.10 508 647 1.7E-29 T 14-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 GYO_1503 fce428139d5d8de9089280b90bccd70a 648 Pfam PF08279 HTH domain 7 65 7.0E-7 T 14-10-2018 IPR013196 Helix-turn-helix, type 11 GYO_1503 fce428139d5d8de9089280b90bccd70a 648 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 514 647 2.7E-28 T 14-10-2018 IPR002178 PTS EIIA type-2 domain GYO_1503 fce428139d5d8de9089280b90bccd70a 648 Gene3D G3DSA:3.40.50.2300 408 495 6.7E-13 T 14-10-2018 GYO_3789 ad62d027d4d72631eb059c6cda017fba 224 Gene3D G3DSA:1.10.150.240 14 92 1.2E-70 T 14-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 GYO_3789 ad62d027d4d72631eb059c6cda017fba 224 Pfam PF13419 Haloacid dehalogenase-like hydrolase 4 188 1.5E-23 T 14-10-2018 GYO_3789 ad62d027d4d72631eb059c6cda017fba 224 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 55 188 2.2E-17 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 GYO_3789 ad62d027d4d72631eb059c6cda017fba 224 Gene3D G3DSA:3.40.50.1000 3 207 1.2E-70 T 14-10-2018 IPR023214 HAD superfamily GYO_3789 ad62d027d4d72631eb059c6cda017fba 224 TIGRFAM TIGR01990 bPGM: beta-phosphoglucomutase 1 189 5.3E-83 T 14-10-2018 IPR010972 Beta-phosphoglucomutase GO:0000287|GO:0005975|GO:0008801 KEGG: 00500+5.4.2.6|MetaCyc: PWY-2721|MetaCyc: PWY-2722|MetaCyc: PWY-7459 GYO_3789 ad62d027d4d72631eb059c6cda017fba 224 TIGRFAM TIGR02009 PGMB-YQAB-SF: beta-phosphoglucomutase family hydrolase 1 188 1.3E-62 T 14-10-2018 IPR010976 Beta-phosphoglucomutase hydrolase GYO_3789 ad62d027d4d72631eb059c6cda017fba 224 SUPERFAMILY SSF56784 1 208 1.16E-45 T 14-10-2018 IPR036412 HAD-like superfamily GYO_0129 f51ce1251ab0398978107ae4d0907227 141 SUPERFAMILY SSF46906 67 140 8.24E-28 T 14-10-2018 IPR036769 Ribosomal protein L11, C-terminal domain superfamily GYO_0129 f51ce1251ab0398978107ae4d0907227 141 SMART SM00649 9 140 3.7E-89 T 14-10-2018 IPR000911 Ribosomal protein L11/L12 GO:0003735|GO:0005840|GO:0006412 GYO_0129 f51ce1251ab0398978107ae4d0907227 141 Gene3D G3DSA:1.10.10.250 72 140 2.6E-30 T 14-10-2018 IPR036769 Ribosomal protein L11, C-terminal domain superfamily GYO_0129 f51ce1251ab0398978107ae4d0907227 141 Pfam PF03946 Ribosomal protein L11, N-terminal domain 9 66 1.9E-31 T 14-10-2018 IPR020784 Ribosomal protein L11, N-terminal GYO_0129 f51ce1251ab0398978107ae4d0907227 141 SUPERFAMILY SSF54747 2 84 7.72E-31 T 14-10-2018 IPR036796 Ribosomal protein L11/L12, N-terminal domain superfamily GYO_0129 f51ce1251ab0398978107ae4d0907227 141 ProSitePatterns PS00359 Ribosomal protein L11 signature. 126 141 - T 14-10-2018 IPR020785 Ribosomal protein L11, conserved site GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 GYO_0129 f51ce1251ab0398978107ae4d0907227 141 Pfam PF00298 Ribosomal protein L11, RNA binding domain 71 139 2.3E-26 T 14-10-2018 IPR020783 Ribosomal protein L11, C-terminal GO:0003735|GO:0005840|GO:0006412 GYO_0129 f51ce1251ab0398978107ae4d0907227 141 Hamap MF_00736 50S ribosomal protein L11 [rplK]. 5 141 32.064 T 14-10-2018 IPR000911 Ribosomal protein L11/L12 GO:0003735|GO:0005840|GO:0006412 GYO_0129 f51ce1251ab0398978107ae4d0907227 141 ProDom PD001367 RIBOSOMAL RIBONUCLEOPROTEIN L11 RRNA-BINDING RNA-BINDING METHYLATION 50S L11 BACTERIAL CHLOROPLAST 36 73 2.0E-16 T 14-10-2018 GYO_0129 f51ce1251ab0398978107ae4d0907227 141 Gene3D G3DSA:3.30.1550.10 2 71 6.1E-35 T 14-10-2018 IPR036796 Ribosomal protein L11/L12, N-terminal domain superfamily GYO_0129 f51ce1251ab0398978107ae4d0907227 141 TIGRFAM TIGR01632 L11_bact: ribosomal protein uL11 3 141 2.8E-65 T 14-10-2018 IPR006519 Ribosomal protein L11, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 GYO_3944 658571670709fd8e77091488d52a4f36 286 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 3 250 3.8E-30 T 14-10-2018 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: R-HSA-446205 GYO_3944 658571670709fd8e77091488d52a4f36 286 Pfam PF08282 haloacid dehalogenase-like hydrolase 4 277 6.8E-64 T 14-10-2018 GYO_3944 658571670709fd8e77091488d52a4f36 286 SUPERFAMILY SSF56784 2 281 5.47E-68 T 14-10-2018 IPR036412 HAD-like superfamily GYO_3944 658571670709fd8e77091488d52a4f36 286 TIGRFAM TIGR00099 Cof-subfamily: Cof-like hydrolase 3 277 9.5E-58 T 14-10-2018 IPR000150 Cof family GO:0016787 GYO_3944 658571670709fd8e77091488d52a4f36 286 Gene3D G3DSA:3.30.1240.10 79 206 4.6E-81 T 14-10-2018 GYO_3944 658571670709fd8e77091488d52a4f36 286 ProSitePatterns PS01228 Hypothetical cof family signature 1. 3 14 - T 14-10-2018 GYO_3944 658571670709fd8e77091488d52a4f36 286 Gene3D G3DSA:3.40.50.1000 2 274 4.6E-81 T 14-10-2018 IPR023214 HAD superfamily GYO_2761 41e99fe0bb8f732ae7a555f5478711e0 248 Pfam PF00005 ABC transporter 18 172 7.8E-31 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 GYO_2761 41e99fe0bb8f732ae7a555f5478711e0 248 SMART SM00382 26 220 2.2E-11 T 14-10-2018 IPR003593 AAA+ ATPase domain GYO_2761 41e99fe0bb8f732ae7a555f5478711e0 248 TIGRFAM TIGR00972 3a0107s01c2: phosphate ABC transporter, ATP-binding protein 2 248 6.0E-123 T 14-10-2018 IPR005670 Phosphate transport system permease protein 1 GO:0005315|GO:0016020|GO:0035435 GYO_2761 41e99fe0bb8f732ae7a555f5478711e0 248 SUPERFAMILY SSF52540 1 235 6.05E-58 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase GYO_2761 41e99fe0bb8f732ae7a555f5478711e0 248 ProSitePatterns PS00211 ABC transporters family signature. 145 159 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 GYO_2761 41e99fe0bb8f732ae7a555f5478711e0 248 Gene3D G3DSA:3.40.50.300 1 246 6.9E-63 T 14-10-2018 GYO_1361 3e0ea9ae3d953ef29b0afa0b369746a9 384 Pfam PF05145 Transition state regulatory protein AbrB 33 365 3.4E-88 T 14-10-2018 IPR007820 AbrB family GO:0010468|GO:0016021 GYO_1361 3e0ea9ae3d953ef29b0afa0b369746a9 384 TIGRFAM TIGR03082 Gneg_AbrB_dup: membrane protein AbrB duplication 204 365 6.5E-36 T 14-10-2018 IPR017516 AbrB duplication GYO_1361 3e0ea9ae3d953ef29b0afa0b369746a9 384 TIGRFAM TIGR03082 Gneg_AbrB_dup: membrane protein AbrB duplication 11 172 1.9E-40 T 14-10-2018 IPR017516 AbrB duplication GYO_1361 3e0ea9ae3d953ef29b0afa0b369746a9 384 PIRSF PIRSF038991 1 374 3.3E-115 T 14-10-2018 IPR007820 AbrB family GO:0010468|GO:0016021 GYO_4414 c25722d39a6636d7f890f6a6b4b02310 509 Gene3D G3DSA:3.40.30.80 2 199 4.2E-63 T 14-10-2018 GYO_4414 c25722d39a6636d7f890f6a6b4b02310 509 PIRSF PIRSF000238 2 509 3.2E-261 T 14-10-2018 IPR012081 Alkyl hydroperoxide reductase subunit F GO:0000302|GO:0008785|GO:0050660|GO:0051287 GYO_4414 c25722d39a6636d7f890f6a6b4b02310 509 ProSitePatterns PS00573 Pyridine nucleotide-disulphide oxidoreductases class-II active site. 337 357 - T 14-10-2018 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site GO:0016491|GO:0055114 GYO_4414 c25722d39a6636d7f890f6a6b4b02310 509 Gene3D G3DSA:3.50.50.60 209 499 4.0E-108 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily GYO_4414 c25722d39a6636d7f890f6a6b4b02310 509 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 242 257 1.3E-67 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 GYO_4414 c25722d39a6636d7f890f6a6b4b02310 509 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 345 369 1.3E-67 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 GYO_4414 c25722d39a6636d7f890f6a6b4b02310 509 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 435 456 1.3E-67 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 GYO_4414 c25722d39a6636d7f890f6a6b4b02310 509 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 469 487 1.3E-67 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 GYO_4414 c25722d39a6636d7f890f6a6b4b02310 509 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 330 342 1.3E-67 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 GYO_4414 c25722d39a6636d7f890f6a6b4b02310 509 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 210 232 1.3E-67 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 GYO_4414 c25722d39a6636d7f890f6a6b4b02310 509 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 397 413 1.3E-67 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 GYO_4414 c25722d39a6636d7f890f6a6b4b02310 509 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 308 316 1.3E-67 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 GYO_4414 c25722d39a6636d7f890f6a6b4b02310 509 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 262 272 1.3E-67 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 GYO_4414 c25722d39a6636d7f890f6a6b4b02310 509 SUPERFAMILY SSF52833 3 101 7.38E-29 T 14-10-2018 IPR036249 Thioredoxin-like superfamily GYO_4414 c25722d39a6636d7f890f6a6b4b02310 509 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 209 487 7.0E-45 T 14-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 GYO_4414 c25722d39a6636d7f890f6a6b4b02310 509 SUPERFAMILY SSF52833 103 196 1.33E-23 T 14-10-2018 IPR036249 Thioredoxin-like superfamily GYO_4414 c25722d39a6636d7f890f6a6b4b02310 509 SUPERFAMILY SSF51905 202 505 9.02E-51 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily GYO_4414 c25722d39a6636d7f890f6a6b4b02310 509 Pfam PF13192 Thioredoxin domain 125 194 3.0E-8 T 14-10-2018 IPR012336 Thioredoxin-like fold GYO_4414 c25722d39a6636d7f890f6a6b4b02310 509 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 307 325 4.6E-38 T 14-10-2018 GYO_4414 c25722d39a6636d7f890f6a6b4b02310 509 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 349 367 4.6E-38 T 14-10-2018 GYO_4414 c25722d39a6636d7f890f6a6b4b02310 509 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 459 481 4.6E-38 T 14-10-2018 GYO_4414 c25722d39a6636d7f890f6a6b4b02310 509 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 433 449 4.6E-38 T 14-10-2018 GYO_4414 c25722d39a6636d7f890f6a6b4b02310 509 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 211 230 4.6E-38 T 14-10-2018 GYO_4414 c25722d39a6636d7f890f6a6b4b02310 509 TIGRFAM TIGR03140 AhpF: alkyl hydroperoxide reductase subunit F 2 509 2.8E-244 T 14-10-2018 IPR012081 Alkyl hydroperoxide reductase subunit F GO:0000302|GO:0008785|GO:0050660|GO:0051287 GYO_4414 c25722d39a6636d7f890f6a6b4b02310 509 Gene3D G3DSA:3.50.50.60 319 441 4.0E-108 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily GYO_0211 6134c1398b8f1a64d444398f80cda877 177 Gene3D G3DSA:3.10.180.10 3 156 6.8E-26 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase GYO_0211 6134c1398b8f1a64d444398f80cda877 177 SUPERFAMILY SSF54593 5 161 1.34E-21 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase GYO_0211 6134c1398b8f1a64d444398f80cda877 177 Pfam PF13669 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 9 121 3.8E-12 T 14-10-2018 GYO_0290 6134c1398b8f1a64d444398f80cda877 177 Gene3D G3DSA:3.10.180.10 3 156 6.8E-26 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase GYO_0290 6134c1398b8f1a64d444398f80cda877 177 SUPERFAMILY SSF54593 5 161 1.34E-21 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase GYO_0290 6134c1398b8f1a64d444398f80cda877 177 Pfam PF13669 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 9 121 3.8E-12 T 14-10-2018 GYO_3695 8013a61faa864fb262549b6b126ad465 614 Pfam PF00005 ABC transporter 370 523 8.5E-33 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 GYO_3695 8013a61faa864fb262549b6b126ad465 614 Gene3D G3DSA:3.40.50.300 347 599 9.8E-68 T 14-10-2018 GYO_3695 8013a61faa864fb262549b6b126ad465 614 SMART SM00382 379 570 6.0E-17 T 14-10-2018 IPR003593 AAA+ ATPase domain GYO_3695 8013a61faa864fb262549b6b126ad465 614 ProSitePatterns PS00211 ABC transporters family signature. 496 510 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 GYO_3695 8013a61faa864fb262549b6b126ad465 614 Gene3D G3DSA:1.20.1560.10 21 335 1.9E-19 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 GYO_3695 8013a61faa864fb262549b6b126ad465 614 SUPERFAMILY SSF90123 20 337 4.19E-29 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 GYO_3695 8013a61faa864fb262549b6b126ad465 614 SUPERFAMILY SSF52540 346 591 7.02E-66 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase GYO_3283 dad539b00218254247f9ccdf709012d6 804 Gene3D G3DSA:3.40.50.620 32 571 8.3E-279 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold GYO_3283 dad539b00218254247f9ccdf709012d6 804 SUPERFAMILY SSF47323 619 803 1.6E-39 T 14-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 GYO_3283 dad539b00218254247f9ccdf709012d6 804 Pfam PF08264 Anticodon-binding domain of tRNA 655 766 2.3E-20 T 14-10-2018 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0004812|GO:0006418 GYO_3283 dad539b00218254247f9ccdf709012d6 804 Gene3D G3DSA:2.30.210.10 572 587 8.3E-279 T 14-10-2018 GYO_3283 dad539b00218254247f9ccdf709012d6 804 Gene3D G3DSA:3.10.20.590 744 803 2.8E-22 T 14-10-2018 GYO_3283 dad539b00218254247f9ccdf709012d6 804 Gene3D G3DSA:1.10.730.10 599 740 4.6E-46 T 14-10-2018 GYO_3283 dad539b00218254247f9ccdf709012d6 804 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 42 52 - T 14-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 GYO_3283 dad539b00218254247f9ccdf709012d6 804 Gene3D G3DSA:3.90.740.10 226 410 8.3E-279 T 14-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 GYO_3283 dad539b00218254247f9ccdf709012d6 804 Hamap MF_00049_B Leucine--tRNA ligase [leuS]. 2 803 23.329 T 14-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 GYO_3283 dad539b00218254247f9ccdf709012d6 804 Pfam PF09334 tRNA synthetases class I (M) 39 169 2.0E-17 T 14-10-2018 IPR015413 Methionyl/Leucyl tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0006418 GYO_3283 dad539b00218254247f9ccdf709012d6 804 Pfam PF13603 Leucyl-tRNA synthetase, Domain 2 219 399 2.1E-69 T 14-10-2018 IPR025709 Leucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 KEGG: 00970+6.1.1.4 GYO_3283 dad539b00218254247f9ccdf709012d6 804 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 412 603 1.3E-20 T 14-10-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 GYO_3283 dad539b00218254247f9ccdf709012d6 804 PRINTS PR00985 Leucyl-tRNA synthetase signature 524 546 3.6E-58 T 14-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 GYO_3283 dad539b00218254247f9ccdf709012d6 804 PRINTS PR00985 Leucyl-tRNA synthetase signature 557 567 3.6E-58 T 14-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 GYO_3283 dad539b00218254247f9ccdf709012d6 804 PRINTS PR00985 Leucyl-tRNA synthetase signature 485 503 3.6E-58 T 14-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 GYO_3283 dad539b00218254247f9ccdf709012d6 804 PRINTS PR00985 Leucyl-tRNA synthetase signature 184 197 3.6E-58 T 14-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 GYO_3283 dad539b00218254247f9ccdf709012d6 804 PRINTS PR00985 Leucyl-tRNA synthetase signature 213 232 3.6E-58 T 14-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 GYO_3283 dad539b00218254247f9ccdf709012d6 804 PRINTS PR00985 Leucyl-tRNA synthetase signature 152 168 3.6E-58 T 14-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 GYO_3283 dad539b00218254247f9ccdf709012d6 804 PRINTS PR00985 Leucyl-tRNA synthetase signature 126 143 3.6E-58 T 14-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 GYO_3283 dad539b00218254247f9ccdf709012d6 804 TIGRFAM TIGR00396 leuS_bact: leucine--tRNA ligase 4 803 0.0 T 14-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 GYO_3283 dad539b00218254247f9ccdf709012d6 804 SUPERFAMILY SSF52374 5 625 3.68E-145 T 14-10-2018 GYO_3283 dad539b00218254247f9ccdf709012d6 804 SUPERFAMILY SSF50677 224 410 2.49E-56 T 14-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 GYO_1596 c6dfe8d468e9232ea068798a1fce9301 87 Pfam PF04688 SPP1 phage holin 3 82 1.7E-31 T 14-10-2018 IPR006479 Holin GYO_1596 c6dfe8d468e9232ea068798a1fce9301 87 ProDom PD008023 HOLIN TRANSMEMBRANE MEMBRANE PROPHAGE FAMILY BHLB SPP1 5'REGION HOLIN ORF050 5 87 7.0E-40 T 14-10-2018 IPR006479 Holin GYO_1596 c6dfe8d468e9232ea068798a1fce9301 87 TIGRFAM TIGR01592 holin_SPP1: holin, SPP1 family 5 85 8.1E-34 T 14-10-2018 IPR006479 Holin GYO_2243 1bce88e46ff3c0340b43653a4ec1e4dc 232 SUPERFAMILY SSF50685 20 137 2.72E-17 T 14-10-2018 IPR036908 RlpA-like domain superfamily GYO_2243 1bce88e46ff3c0340b43653a4ec1e4dc 232 Gene3D G3DSA:2.60.40.760 133 226 1.0E-34 T 14-10-2018 IPR036749 Expansin, cellulose-binding-like domain superfamily GYO_2243 1bce88e46ff3c0340b43653a4ec1e4dc 232 SUPERFAMILY SSF49590 136 217 3.14E-14 T 14-10-2018 IPR036749 Expansin, cellulose-binding-like domain superfamily GYO_2243 1bce88e46ff3c0340b43653a4ec1e4dc 232 Pfam PF03330 Lytic transglycolase 76 127 4.6E-7 T 14-10-2018 IPR009009 RlpA-like protein, double-psi beta-barrel domain GYO_2243 1bce88e46ff3c0340b43653a4ec1e4dc 232 Gene3D G3DSA:2.40.40.10 25 132 4.1E-26 T 14-10-2018 IPR036908 RlpA-like domain superfamily GYO_1161 b42242212ccd53a883f3eb59dcd1a5d3 258 Gene3D G3DSA:2.60.40.640 13 135 6.7E-7 T 14-10-2018 IPR014752 Arrestin, C-terminal GYO_1161 b42242212ccd53a883f3eb59dcd1a5d3 258 SUPERFAMILY SSF81296 17 127 7.7E-8 T 14-10-2018 IPR014756 Immunoglobulin E-set GYO_1161 b42242212ccd53a883f3eb59dcd1a5d3 258 Pfam PF07070 SpoOM protein 4 212 1.8E-77 T 14-10-2018 IPR009776 Sporulation stage 0, protein M GYO_1215 7845dfd5b18fab1f3d4131edf994eca3 190 Gene3D G3DSA:3.20.20.400 1 187 6.5E-74 T 14-10-2018 IPR035928 GlpP-like superfamily GYO_1215 7845dfd5b18fab1f3d4131edf994eca3 190 PIRSF PIRSF016897 1 186 1.6E-72 T 14-10-2018 IPR006699 Glycerol uptake operon antiterminator GO:0006071|GO:0006355 GYO_1215 7845dfd5b18fab1f3d4131edf994eca3 190 SUPERFAMILY SSF110391 7 181 8.11E-64 T 14-10-2018 IPR035928 GlpP-like superfamily GYO_1215 7845dfd5b18fab1f3d4131edf994eca3 190 Pfam PF04309 Glycerol-3-phosphate responsive antiterminator 8 180 7.6E-67 T 14-10-2018 IPR006699 Glycerol uptake operon antiterminator GO:0006071|GO:0006355 GYO_0930 aeb8ad5d6a69d1474e4e3eca3e2dfdb6 96 Hamap MF_00122 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C [gatC]. 3 96 26.016 T 14-10-2018 IPR003837 Glu-tRNAGln amidotransferase C subunit GO:0006450 GYO_0930 aeb8ad5d6a69d1474e4e3eca3e2dfdb6 96 SUPERFAMILY SSF141000 3 94 1.83E-32 T 14-10-2018 IPR036113 Glu-tRNAGln amidotransferase superfamily, subunit C GO:0006450 GYO_0930 aeb8ad5d6a69d1474e4e3eca3e2dfdb6 96 TIGRFAM TIGR00135 gatC: aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, C subunit 4 96 1.2E-36 T 14-10-2018 IPR003837 Glu-tRNAGln amidotransferase C subunit GO:0006450 GYO_0930 aeb8ad5d6a69d1474e4e3eca3e2dfdb6 96 Pfam PF02686 Glu-tRNAGln amidotransferase C subunit 20 91 2.2E-23 T 14-10-2018 IPR003837 Glu-tRNAGln amidotransferase C subunit GO:0006450 GYO_0930 aeb8ad5d6a69d1474e4e3eca3e2dfdb6 96 Gene3D G3DSA:1.10.20.60 1 94 6.7E-33 T 14-10-2018 GYO_2370 6632e464bb1c788776512413efc948d5 104 Pfam PF14191 YodL-like 25 86 1.7E-5 T 14-10-2018 IPR025923 YodL-like GYO_2370 6632e464bb1c788776512413efc948d5 104 ProDom PD030115 YODL GK1575 1 104 1.0E-56 T 14-10-2018 GYO_1068 76b8cd34b75114737e152ec9e543d958 466 SUPERFAMILY SSF53335 77 460 1.18E-79 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase GYO_1068 76b8cd34b75114737e152ec9e543d958 466 TIGRFAM TIGR00479 rumA: 23S rRNA (uracil-5-)-methyltransferase RumA 25 455 3.5E-208 T 14-10-2018 GYO_1068 76b8cd34b75114737e152ec9e543d958 466 Gene3D G3DSA:3.40.1350.30 139 295 4.5E-114 T 14-10-2018 GYO_1068 76b8cd34b75114737e152ec9e543d958 466 Gene3D G3DSA:2.40.50.140 3 88 1.3E-24 T 14-10-2018 GYO_1068 76b8cd34b75114737e152ec9e543d958 466 Pfam PF01938 TRAM domain 13 67 6.6E-14 T 14-10-2018 IPR002792 TRAM domain GYO_1068 76b8cd34b75114737e152ec9e543d958 466 SUPERFAMILY SSF50249 6 68 4.23E-16 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold GYO_1068 76b8cd34b75114737e152ec9e543d958 466 Gene3D G3DSA:3.40.50.150 90 457 4.5E-114 T 14-10-2018 GYO_1068 76b8cd34b75114737e152ec9e543d958 466 ProSitePatterns PS01231 RNA methyltransferase trmA family signature 2. 445 455 - T 14-10-2018 IPR030391 RNA methyltransferase TrmA, conserved site GYO_1068 76b8cd34b75114737e152ec9e543d958 466 ProSitePatterns PS01230 RNA methyltransferase trmA family signature 1. 394 425 - T 14-10-2018 IPR030390 RNA methyltransferase TrmA, active site GYO_1068 76b8cd34b75114737e152ec9e543d958 466 Pfam PF05958 tRNA (Uracil-5-)-methyltransferase 236 457 4.6E-20 T 14-10-2018 IPR010280 (Uracil-5)-methyltransferase family GO:0006396|GO:0008173 GYO_0139 1e482abb6e14c5b299b9f0507317e5f4 336 SUPERFAMILY SSF54211 121 241 3.03E-44 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold GYO_0139 1e482abb6e14c5b299b9f0507317e5f4 336 SUPERFAMILY SSF50447 1 47 3.93E-9 T 14-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily GYO_0139 1e482abb6e14c5b299b9f0507317e5f4 336 Pfam PF14492 Elongation Factor G, domain II 46 119 3.2E-36 T 14-10-2018 GYO_0139 1e482abb6e14c5b299b9f0507317e5f4 336 Pfam PF00679 Elongation factor G C-terminus 242 328 5.8E-32 T 14-10-2018 IPR000640 Elongation factor EFG, domain V-like GYO_0139 1e482abb6e14c5b299b9f0507317e5f4 336 SUPERFAMILY SSF54980 44 122 9.35E-26 T 14-10-2018 IPR035647 EF-G domain III/V-like GYO_0139 1e482abb6e14c5b299b9f0507317e5f4 336 Gene3D G3DSA:3.30.70.870 48 125 1.1E-32 T 14-10-2018 GYO_0139 1e482abb6e14c5b299b9f0507317e5f4 336 SMART SM00838 242 329 1.9E-58 T 14-10-2018 IPR000640 Elongation factor EFG, domain V-like GYO_0139 1e482abb6e14c5b299b9f0507317e5f4 336 SUPERFAMILY SSF54980 242 332 1.25E-31 T 14-10-2018 IPR035647 EF-G domain III/V-like GYO_0139 1e482abb6e14c5b299b9f0507317e5f4 336 Gene3D G3DSA:3.30.230.10 126 329 1.1E-95 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup GYO_0139 1e482abb6e14c5b299b9f0507317e5f4 336 Gene3D G3DSA:3.30.70.240 246 316 1.1E-95 T 14-10-2018 GYO_0139 1e482abb6e14c5b299b9f0507317e5f4 336 SMART SM00889 122 240 2.2E-73 T 14-10-2018 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 GYO_0139 1e482abb6e14c5b299b9f0507317e5f4 336 Pfam PF03764 Elongation factor G, domain IV 121 239 3.2E-47 T 14-10-2018 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 GYO_0139 1e482abb6e14c5b299b9f0507317e5f4 336 Gene3D G3DSA:2.40.30.10 1 47 6.8E-15 T 14-10-2018 GYO_0802 878f638fd051be1eafa1df9aac286a7c 199 Gene3D G3DSA:1.10.10.60 2 58 1.8E-16 T 14-10-2018 GYO_0802 878f638fd051be1eafa1df9aac286a7c 199 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 16 29 3.5E-7 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 GYO_0802 878f638fd051be1eafa1df9aac286a7c 199 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 37 60 3.5E-7 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 GYO_0802 878f638fd051be1eafa1df9aac286a7c 199 SUPERFAMILY SSF46689 3 75 4.57E-17 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 GYO_0802 878f638fd051be1eafa1df9aac286a7c 199 SUPERFAMILY SSF48498 90 192 3.78E-6 T 14-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily GYO_0802 878f638fd051be1eafa1df9aac286a7c 199 Pfam PF00440 Bacterial regulatory proteins, tetR family 16 62 3.3E-15 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 GYO_0802 878f638fd051be1eafa1df9aac286a7c 199 Gene3D G3DSA:1.10.357.10 59 196 3.8E-11 T 14-10-2018 GYO_1190 293bbb3b642f956760de37498058e33b 532 SUPERFAMILY SSF103473 12 514 2.22E-74 T 14-10-2018 IPR036259 MFS transporter superfamily GYO_1190 293bbb3b642f956760de37498058e33b 532 PRINTS PR01036 Tetracycline resistance protein TetB signature 109 129 2.1E-11 T 14-10-2018 GYO_1190 293bbb3b642f956760de37498058e33b 532 PRINTS PR01036 Tetracycline resistance protein TetB signature 139 163 2.1E-11 T 14-10-2018 GYO_1190 293bbb3b642f956760de37498058e33b 532 PRINTS PR01036 Tetracycline resistance protein TetB signature 18 42 2.1E-11 T 14-10-2018 GYO_1190 293bbb3b642f956760de37498058e33b 532 PRINTS PR01036 Tetracycline resistance protein TetB signature 303 327 2.1E-11 T 14-10-2018 GYO_1190 293bbb3b642f956760de37498058e33b 532 Gene3D G3DSA:1.20.1720.10 15 221 3.9E-43 T 14-10-2018 GYO_1190 293bbb3b642f956760de37498058e33b 532 Pfam PF07690 Major Facilitator Superfamily 20 410 6.5E-55 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 GYO_1190 293bbb3b642f956760de37498058e33b 532 TIGRFAM TIGR00711 efflux_EmrB: drug resistance MFS transporter, drug:H+ antiporter-2 (14 Spanner) (DHA2) family 13 504 1.9E-201 T 14-10-2018 IPR004638 Drug resistance transporter EmrB/QacA subfamily GO:0016021|GO:0022857|GO:0055085 GYO_1092 c073eb8105827fb57acffcd23476b8f9 285 SUPERFAMILY SSF54593 4 169 8.73E-37 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase GYO_1092 c073eb8105827fb57acffcd23476b8f9 285 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 10 122 7.2E-14 T 14-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain GYO_1092 c073eb8105827fb57acffcd23476b8f9 285 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 170 266 5.1E-9 T 14-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain GYO_1092 c073eb8105827fb57acffcd23476b8f9 285 Gene3D G3DSA:3.10.180.10 8 145 1.3E-29 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase GYO_1092 c073eb8105827fb57acffcd23476b8f9 285 ProSitePatterns PS00082 Extradiol ring-cleavage dioxygenases signature. 103 122 - T 14-10-2018 IPR000486 Extradiol ring-cleavage dioxygenase, class I /II GO:0003824|GO:0006725|GO:0008198|GO:0055114 GYO_1092 c073eb8105827fb57acffcd23476b8f9 285 SUPERFAMILY SSF54593 166 275 3.03E-26 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase GYO_1092 c073eb8105827fb57acffcd23476b8f9 285 Gene3D G3DSA:3.10.180.10 168 285 1.2E-24 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase GYO_2689 aca98b64578cd05e225496e382d12aea 84 ProDom PD028235 EXONUCLEASE SMALL SUBUNIT VII EXODEOXYRIBONUCLEASE HYDROLASE NUCLEASE PROBABLE VII SIMILAR 11 50 1.0E-16 T 14-10-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 GYO_2689 aca98b64578cd05e225496e382d12aea 84 Hamap MF_00337 Exodeoxyribonuclease 7 small subunit [xseB]. 11 71 14.935 T 14-10-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 GYO_2689 aca98b64578cd05e225496e382d12aea 84 Gene3D G3DSA:1.10.287.1040 5 82 3.2E-23 T 14-10-2018 IPR037004 Exonuclease VII, small subunit superfamily GO:0006308|GO:0008855|GO:0009318 GYO_2689 aca98b64578cd05e225496e382d12aea 84 PIRSF PIRSF006488 1 84 5.1E-21 T 14-10-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 GYO_2689 aca98b64578cd05e225496e382d12aea 84 SUPERFAMILY SSF116842 5 74 3.4E-22 T 14-10-2018 GYO_2689 aca98b64578cd05e225496e382d12aea 84 TIGRFAM TIGR01280 xseB: exodeoxyribonuclease VII, small subunit 11 66 5.3E-23 T 14-10-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 GYO_2689 aca98b64578cd05e225496e382d12aea 84 Pfam PF02609 Exonuclease VII small subunit 12 61 3.5E-21 T 14-10-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 GYO_2213 a708fa409ea3f67b90c778d29ff85b66 284 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 5.0E-5 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 GYO_2213 a708fa409ea3f67b90c778d29ff85b66 284 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 5.0E-5 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 GYO_2213 a708fa409ea3f67b90c778d29ff85b66 284 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 5.0E-5 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 GYO_2213 a708fa409ea3f67b90c778d29ff85b66 284 Gene3D G3DSA:3.40.190.290 90 282 1.3E-33 T 14-10-2018 GYO_2213 a708fa409ea3f67b90c778d29ff85b66 284 SUPERFAMILY SSF46785 4 108 1.5E-23 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily GYO_2213 a708fa409ea3f67b90c778d29ff85b66 284 Gene3D G3DSA:1.10.10.10 1 89 2.4E-25 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily GYO_2213 a708fa409ea3f67b90c778d29ff85b66 284 SUPERFAMILY SSF53850 87 280 5.0E-37 T 14-10-2018 GYO_2213 a708fa409ea3f67b90c778d29ff85b66 284 Pfam PF03466 LysR substrate binding domain 85 280 4.0E-41 T 14-10-2018 IPR005119 LysR, substrate-binding GYO_2213 a708fa409ea3f67b90c778d29ff85b66 284 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 62 1.1E-20 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 GYO_1771 16c3f67e11c7bc2c922a401e6885beea 377 Gene3D G3DSA:2.40.420.20 290 377 3.1E-17 T 14-10-2018 GYO_1771 16c3f67e11c7bc2c922a401e6885beea 377 Gene3D G3DSA:2.40.30.170 216 269 3.4E-21 T 14-10-2018 GYO_1771 16c3f67e11c7bc2c922a401e6885beea 377 Gene3D G3DSA:1.10.287.470 97 170 3.4E-21 T 14-10-2018 GYO_1771 16c3f67e11c7bc2c922a401e6885beea 377 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 43 376 2.0E-28 T 14-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 GYO_1771 16c3f67e11c7bc2c922a401e6885beea 377 Gene3D G3DSA:2.40.50.100 72 215 3.4E-21 T 14-10-2018 GYO_1771 16c3f67e11c7bc2c922a401e6885beea 377 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 47 265 2.0E-11 T 14-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain GYO_1976 0e9122169d59f6524b4f98f1fd05e038 338 SUPERFAMILY SSF48029 118 329 6.15E-70 T 14-10-2018 IPR011002 Flagellar motor switch protein FliG, alpha-helical GYO_1976 0e9122169d59f6524b4f98f1fd05e038 338 TIGRFAM TIGR00207 fliG: flagellar motor switch protein FliG 1 338 3.5E-168 T 14-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 GYO_1976 0e9122169d59f6524b4f98f1fd05e038 338 Gene3D G3DSA:1.10.220.30 199 338 1.0E-50 T 14-10-2018 GYO_1976 0e9122169d59f6524b4f98f1fd05e038 338 PIRSF PIRSF003161 3 338 4.3E-128 T 14-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 GYO_1976 0e9122169d59f6524b4f98f1fd05e038 338 Gene3D G3DSA:1.10.220.30 1 88 1.1E-18 T 14-10-2018 GYO_1976 0e9122169d59f6524b4f98f1fd05e038 338 Pfam PF01706 FliG C-terminal domain 222 328 1.1E-42 T 14-10-2018 IPR023087 Flagellar motor switch protein FliG, C-terminal GYO_1976 0e9122169d59f6524b4f98f1fd05e038 338 SUPERFAMILY SSF48029 10 104 2.2E-20 T 14-10-2018 IPR011002 Flagellar motor switch protein FliG, alpha-helical GYO_1976 0e9122169d59f6524b4f98f1fd05e038 338 Gene3D G3DSA:1.10.220.30 107 198 1.3E-33 T 14-10-2018 GYO_1976 0e9122169d59f6524b4f98f1fd05e038 338 Pfam PF14841 FliG middle domain 119 193 1.1E-30 T 14-10-2018 IPR032779 Flagellar motor switch protein FliG, middle domain GYO_1976 0e9122169d59f6524b4f98f1fd05e038 338 PRINTS PR00954 Flagellar motor switch protein FliG signature 9 25 4.8E-80 T 14-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 GYO_1976 0e9122169d59f6524b4f98f1fd05e038 338 PRINTS PR00954 Flagellar motor switch protein FliG signature 38 64 4.8E-80 T 14-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 GYO_1976 0e9122169d59f6524b4f98f1fd05e038 338 PRINTS PR00954 Flagellar motor switch protein FliG signature 230 250 4.8E-80 T 14-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 GYO_1976 0e9122169d59f6524b4f98f1fd05e038 338 PRINTS PR00954 Flagellar motor switch protein FliG signature 252 272 4.8E-80 T 14-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 GYO_1976 0e9122169d59f6524b4f98f1fd05e038 338 PRINTS PR00954 Flagellar motor switch protein FliG signature 118 141 4.8E-80 T 14-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 GYO_1976 0e9122169d59f6524b4f98f1fd05e038 338 PRINTS PR00954 Flagellar motor switch protein FliG signature 199 224 4.8E-80 T 14-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 GYO_1976 0e9122169d59f6524b4f98f1fd05e038 338 PRINTS PR00954 Flagellar motor switch protein FliG signature 276 302 4.8E-80 T 14-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 GYO_1976 0e9122169d59f6524b4f98f1fd05e038 338 Pfam PF14842 FliG N-terminal domain 8 111 4.6E-36 T 14-10-2018 IPR028263 Flagellar motor switch protein FliG, N-terminal domain GYO_1808 f387e4ecf744c067fa2a35c93ea547f8 265 Gene3D G3DSA:3.40.190.80 145 265 1.3E-34 T 14-10-2018 GYO_1808 f387e4ecf744c067fa2a35c93ea547f8 265 ProSitePatterns PS00630 Inositol monophosphatase family signature 2. 213 227 - T 14-10-2018 IPR020550 Inositol monophosphatase, conserved site GO:0046854 GYO_1808 f387e4ecf744c067fa2a35c93ea547f8 265 PRINTS PR00377 Inositol monophosphatase superfamily signature 133 156 2.9E-39 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 GYO_1808 f387e4ecf744c067fa2a35c93ea547f8 265 PRINTS PR00377 Inositol monophosphatase superfamily signature 179 200 2.9E-39 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 GYO_1808 f387e4ecf744c067fa2a35c93ea547f8 265 PRINTS PR00377 Inositol monophosphatase superfamily signature 62 78 2.9E-39 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 GYO_1808 f387e4ecf744c067fa2a35c93ea547f8 265 PRINTS PR00377 Inositol monophosphatase superfamily signature 84 100 2.9E-39 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 GYO_1808 f387e4ecf744c067fa2a35c93ea547f8 265 PRINTS PR00377 Inositol monophosphatase superfamily signature 210 234 2.9E-39 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 GYO_1808 f387e4ecf744c067fa2a35c93ea547f8 265 PRINTS PR00377 Inositol monophosphatase superfamily signature 40 60 2.9E-39 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 GYO_1808 f387e4ecf744c067fa2a35c93ea547f8 265 ProSitePatterns PS00629 Inositol monophosphatase family signature 1. 84 97 - T 14-10-2018 IPR020583 Inositol monophosphatase, metal-binding site GYO_1808 f387e4ecf744c067fa2a35c93ea547f8 265 Pfam PF00459 Inositol monophosphatase family 5 257 1.0E-68 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 GYO_1808 f387e4ecf744c067fa2a35c93ea547f8 265 Gene3D G3DSA:3.30.540.10 1 144 1.3E-45 T 14-10-2018 GYO_1808 f387e4ecf744c067fa2a35c93ea547f8 265 SUPERFAMILY SSF56655 3 258 1.44E-77 T 14-10-2018 GYO_2050 8f53267dedf1cdb880a3110b36904eb9 520 SUPERFAMILY SSF54791 208 304 7.03E-16 T 14-10-2018 IPR036612 K Homology domain, type 1 superfamily GO:0003723 GYO_2050 8f53267dedf1cdb880a3110b36904eb9 520 Pfam PF12072 Domain of unknown function (DUF3552) 6 205 2.1E-76 T 14-10-2018 IPR022711 Ribonuclease Y, N-terminal GYO_2050 8f53267dedf1cdb880a3110b36904eb9 520 TIGRFAM TIGR03319 RNase_Y: ribonuclease Y 8 520 2.5E-247 T 14-10-2018 IPR017705 Ribonuclease Y GO:0003723|GO:0006402|GO:0016020 GYO_2050 8f53267dedf1cdb880a3110b36904eb9 520 Hamap MF_00335 Ribonuclease Y [rny]. 5 520 26.004 T 14-10-2018 IPR017705 Ribonuclease Y GO:0003723|GO:0006402|GO:0016020 GYO_2050 8f53267dedf1cdb880a3110b36904eb9 520 Gene3D G3DSA:3.30.1370.10 208 305 1.2E-8 T 14-10-2018 IPR036612 K Homology domain, type 1 superfamily GO:0003723 GYO_2050 8f53267dedf1cdb880a3110b36904eb9 520 Pfam PF00013 KH domain 213 267 3.4E-6 T 14-10-2018 IPR004088 K Homology domain, type 1 GO:0003723 GYO_2050 8f53267dedf1cdb880a3110b36904eb9 520 TIGRFAM TIGR00277 HDIG: HDIG domain 332 409 9.9E-27 T 14-10-2018 IPR006675 HDIG domain GYO_2050 8f53267dedf1cdb880a3110b36904eb9 520 SMART SM00322 208 275 1.1E-6 T 14-10-2018 IPR004087 K Homology domain GO:0003676 GYO_2050 8f53267dedf1cdb880a3110b36904eb9 520 Pfam PF01966 HD domain 337 428 5.9E-19 T 14-10-2018 IPR006674 HD domain GYO_2050 8f53267dedf1cdb880a3110b36904eb9 520 Gene3D G3DSA:1.10.3210.10 319 473 7.1E-20 T 14-10-2018 GYO_2050 8f53267dedf1cdb880a3110b36904eb9 520 SUPERFAMILY SSF109604 316 467 2.92E-32 T 14-10-2018 GYO_2050 8f53267dedf1cdb880a3110b36904eb9 520 SMART SM00471 332 438 5.3E-14 T 14-10-2018 IPR003607 HD/PDEase domain GYO_4556 e1b4218eee3730915a9d58debbbe9d54 863 Gene3D G3DSA:3.40.50.300 561 863 2.1E-104 T 14-10-2018 GYO_4556 e1b4218eee3730915a9d58debbbe9d54 863 PIRSF PIRSF037677 180 842 9.2E-130 T 14-10-2018 IPR017261 DNA mismatch repair protein MutS/MSH GO:0006298|GO:0030983 GYO_4556 e1b4218eee3730915a9d58debbbe9d54 863 PIRSF PIRSF037677 1 172 5.2E-32 T 14-10-2018 IPR017261 DNA mismatch repair protein MutS/MSH GO:0006298|GO:0030983 GYO_4556 e1b4218eee3730915a9d58debbbe9d54 863 Hamap MF_00096 DNA mismatch repair protein MutS [mutS]. 9 854 25.566 T 14-10-2018 IPR005748 DNA mismatch repair protein MutS GO:0005524|GO:0006298|GO:0030983 GYO_4556 e1b4218eee3730915a9d58debbbe9d54 863 SMART SM00533 275 583 2.9E-119 T 14-10-2018 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 GYO_4556 e1b4218eee3730915a9d58debbbe9d54 863 SUPERFAMILY SSF55271 5 117 4.05E-43 T 14-10-2018 IPR016151 DNA mismatch repair protein MutS, N-terminal GO:0005524|GO:0006298|GO:0030983 Reactome: R-HSA-5632928 GYO_4556 e1b4218eee3730915a9d58debbbe9d54 863 Pfam PF05190 MutS family domain IV 420 511 8.0E-30 T 14-10-2018 IPR007861 DNA mismatch repair protein MutS, clamp GO:0005524|GO:0006298|GO:0030983 GYO_4556 e1b4218eee3730915a9d58debbbe9d54 863 SUPERFAMILY SSF53150 119 271 5.36E-29 T 14-10-2018 IPR036678 MutS, connector domain superfamily GO:0005524|GO:0006298|GO:0030983 GYO_4556 e1b4218eee3730915a9d58debbbe9d54 863 Pfam PF00488 MutS domain V 604 790 1.1E-85 T 14-10-2018 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 GYO_4556 e1b4218eee3730915a9d58debbbe9d54 863 SUPERFAMILY SSF52540 560 791 3.73E-63 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase GYO_4556 e1b4218eee3730915a9d58debbbe9d54 863 Pfam PF05192 MutS domain III 263 552 7.2E-45 T 14-10-2018 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 GYO_4556 e1b4218eee3730915a9d58debbbe9d54 863 ProSitePatterns PS00486 DNA mismatch repair proteins mutS family signature. 681 697 - T 14-10-2018 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 GYO_4556 e1b4218eee3730915a9d58debbbe9d54 863 Gene3D G3DSA:3.30.420.110 129 252 3.7E-11 T 14-10-2018 IPR036678 MutS, connector domain superfamily GO:0005524|GO:0006298|GO:0030983 GYO_4556 e1b4218eee3730915a9d58debbbe9d54 863 SMART SM00534 600 787 3.7E-125 T 14-10-2018 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 GYO_4556 e1b4218eee3730915a9d58debbbe9d54 863 TIGRFAM TIGR01070 mutS1: DNA mismatch repair protein MutS 9 860 0.0 T 14-10-2018 IPR005748 DNA mismatch repair protein MutS GO:0005524|GO:0006298|GO:0030983 GYO_4556 e1b4218eee3730915a9d58debbbe9d54 863 Gene3D G3DSA:1.10.1420.10 257 552 1.3E-100 T 14-10-2018 GYO_4556 e1b4218eee3730915a9d58debbbe9d54 863 SUPERFAMILY SSF48334 258 557 5.36E-89 T 14-10-2018 IPR036187 DNA mismatch repair protein MutS, core domain superfamily GYO_4556 e1b4218eee3730915a9d58debbbe9d54 863 Gene3D G3DSA:3.40.1170.10 2 122 1.1E-49 T 14-10-2018 IPR016151 DNA mismatch repair protein MutS, N-terminal GO:0005524|GO:0006298|GO:0030983 Reactome: R-HSA-5632928 GYO_4556 e1b4218eee3730915a9d58debbbe9d54 863 Gene3D G3DSA:1.10.1420.10 392 528 1.3E-100 T 14-10-2018 GYO_4556 e1b4218eee3730915a9d58debbbe9d54 863 Pfam PF01624 MutS domain I 10 121 4.0E-47 T 14-10-2018 IPR007695 DNA mismatch repair protein MutS-like, N-terminal GO:0005524|GO:0006298|GO:0030983 Reactome: R-HSA-5632928 GYO_4556 e1b4218eee3730915a9d58debbbe9d54 863 Pfam PF05188 MutS domain II 130 244 3.7E-12 T 14-10-2018 IPR007860 DNA mismatch repair protein MutS, connector domain GO:0005524|GO:0006298|GO:0030983 GYO_1408 e20dc838340a4a0d199a3decffa5de29 163 Gene3D G3DSA:3.30.70.860 6 163 7.5E-61 T 14-10-2018 IPR035571 UPF0234-like, C-terminal GYO_1408 e20dc838340a4a0d199a3decffa5de29 163 SUPERFAMILY SSF89963 92 163 3.66E-25 T 14-10-2018 IPR036183 YajQ-like superfamily GYO_1408 e20dc838340a4a0d199a3decffa5de29 163 SUPERFAMILY SSF89963 6 90 7.32E-30 T 14-10-2018 IPR036183 YajQ-like superfamily GYO_1408 e20dc838340a4a0d199a3decffa5de29 163 Hamap MF_00632 UPF0234 protein YajQ [yajQ]. 4 163 26.752 T 14-10-2018 IPR007551 Protein of unknown function DUF520 GYO_1408 e20dc838340a4a0d199a3decffa5de29 163 Gene3D G3DSA:3.30.70.990 12 101 7.5E-61 T 14-10-2018 IPR035570 UPF0234, N-terminal GYO_1408 e20dc838340a4a0d199a3decffa5de29 163 Pfam PF04461 Protein of unknown function (DUF520) 5 163 2.7E-61 T 14-10-2018 IPR007551 Protein of unknown function DUF520 GYO_2841 3a148e7475848c69d3b89e374a702de2 250 SUPERFAMILY SSF47090 175 245 6.28E-18 T 14-10-2018 IPR036365 PGBD-like superfamily GYO_2841 3a148e7475848c69d3b89e374a702de2 250 SUPERFAMILY SSF55846 1 154 2.36E-46 T 14-10-2018 IPR036505 N-acetylmuramoyl-L-alanine amidase/PGRP domain superfamily GO:0008745|GO:0009253 Reactome: R-HSA-6803157 GYO_2841 3a148e7475848c69d3b89e374a702de2 250 SMART SM00644 11 154 1.3E-41 T 14-10-2018 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 Reactome: R-HSA-6803157 GYO_2841 3a148e7475848c69d3b89e374a702de2 250 Pfam PF01510 N-acetylmuramoyl-L-alanine amidase 23 141 5.3E-25 T 14-10-2018 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 Reactome: R-HSA-6803157 GYO_2841 3a148e7475848c69d3b89e374a702de2 250 Gene3D G3DSA:3.40.80.10 1 155 3.2E-55 T 14-10-2018 IPR036505 N-acetylmuramoyl-L-alanine amidase/PGRP domain superfamily GO:0008745|GO:0009253 Reactome: R-HSA-6803157 GYO_2841 3a148e7475848c69d3b89e374a702de2 250 Pfam PF01471 Putative peptidoglycan binding domain 184 245 3.9E-17 T 14-10-2018 IPR002477 Peptidoglycan binding-like GYO_2841 3a148e7475848c69d3b89e374a702de2 250 Gene3D G3DSA:1.10.101.10 173 250 3.1E-19 T 14-10-2018 IPR036366 PGBD superfamily Reactome: R-HSA-1442490|Reactome: R-HSA-1474228 GYO_3527 e58a0614c5b02600ec807bf74b02c718 332 Gene3D G3DSA:2.70.70.10 122 331 1.7E-55 T 14-10-2018 IPR011055 Duplicated hybrid motif GYO_3527 e58a0614c5b02600ec807bf74b02c718 332 Pfam PF01551 Peptidase family M23 209 307 3.7E-21 T 14-10-2018 IPR016047 Peptidase M23 GYO_3527 e58a0614c5b02600ec807bf74b02c718 332 SUPERFAMILY SSF51261 122 320 5.75E-36 T 14-10-2018 IPR011055 Duplicated hybrid motif GYO_2815 edfa5513633e124afea96927ad7f159c 611 Hamap MF_00332 Chaperone protein DnaK [dnaK]. 1 604 37.221 T 14-10-2018 IPR012725 Chaperone DnaK GO:0005524|GO:0006457|GO:0051082 Reactome: R-HSA-1268020|Reactome: R-HSA-3371453|Reactome: R-HSA-8949613|Reactome: R-HSA-8950505 GYO_2815 edfa5513633e124afea96927ad7f159c 611 TIGRFAM TIGR02350 prok_dnaK: chaperone protein DnaK 3 573 7.4E-287 T 14-10-2018 IPR012725 Chaperone DnaK GO:0005524|GO:0006457|GO:0051082 Reactome: R-HSA-1268020|Reactome: R-HSA-3371453|Reactome: R-HSA-8949613|Reactome: R-HSA-8950505 GYO_2815 edfa5513633e124afea96927ad7f159c 611 SUPERFAMILY SSF53067 2 157 9.36E-58 T 14-10-2018 GYO_2815 edfa5513633e124afea96927ad7f159c 611 Gene3D G3DSA:3.30.420.40 5 347 1.2E-152 T 14-10-2018 GYO_2815 edfa5513633e124afea96927ad7f159c 611 Gene3D G3DSA:3.30.420.40 159 337 1.2E-152 T 14-10-2018 GYO_2815 edfa5513633e124afea96927ad7f159c 611 Gene3D G3DSA:1.20.1270.10 477 578 5.4E-25 T 14-10-2018 IPR029048 Heat shock protein 70kD, C-terminal domain superfamily Reactome: R-HSA-3371453 GYO_2815 edfa5513633e124afea96927ad7f159c 611 PRINTS PR00301 70kDa heat shock protein signature 53 61 1.4E-79 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 GYO_2815 edfa5513633e124afea96927ad7f159c 611 PRINTS PR00301 70kDa heat shock protein signature 31 43 1.4E-79 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 GYO_2815 edfa5513633e124afea96927ad7f159c 611 PRINTS PR00301 70kDa heat shock protein signature 439 455 1.4E-79 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 GYO_2815 edfa5513633e124afea96927ad7f159c 611 PRINTS PR00301 70kDa heat shock protein signature 304 320 1.4E-79 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 GYO_2815 edfa5513633e124afea96927ad7f159c 611 PRINTS PR00301 70kDa heat shock protein signature 358 377 1.4E-79 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 GYO_2815 edfa5513633e124afea96927ad7f159c 611 PRINTS PR00301 70kDa heat shock protein signature 172 182 1.4E-79 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 GYO_2815 edfa5513633e124afea96927ad7f159c 611 PRINTS PR00301 70kDa heat shock protein signature 3 16 1.4E-79 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 GYO_2815 edfa5513633e124afea96927ad7f159c 611 PRINTS PR00301 70kDa heat shock protein signature 335 355 1.4E-79 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 GYO_2815 edfa5513633e124afea96927ad7f159c 611 PRINTS PR00301 70kDa heat shock protein signature 112 132 1.4E-79 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 GYO_2815 edfa5513633e124afea96927ad7f159c 611 Pfam PF00012 Hsp70 protein 76 573 5.6E-223 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 GYO_2815 edfa5513633e124afea96927ad7f159c 611 ProSitePatterns PS00329 Heat shock hsp70 proteins family signature 2. 166 179 - T 14-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 GYO_2815 edfa5513633e124afea96927ad7f159c 611 SUPERFAMILY SSF100920 354 510 6.15E-62 T 14-10-2018 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily Reactome: R-HSA-3371453 GYO_2815 edfa5513633e124afea96927ad7f159c 611 ProSitePatterns PS01036 Heat shock hsp70 proteins family signature 3. 307 321 - T 14-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 GYO_2815 edfa5513633e124afea96927ad7f159c 611 SUPERFAMILY SSF53067 160 351 1.05E-67 T 14-10-2018 GYO_2815 edfa5513633e124afea96927ad7f159c 611 ProSitePatterns PS00297 Heat shock hsp70 proteins family signature 1. 7 14 - T 14-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 GYO_2815 edfa5513633e124afea96927ad7f159c 611 SUPERFAMILY SSF100934 477 576 6.67E-13 T 14-10-2018 IPR029048 Heat shock protein 70kD, C-terminal domain superfamily Reactome: R-HSA-3371453 GYO_2815 edfa5513633e124afea96927ad7f159c 611 Gene3D G3DSA:3.90.640.10 198 279 1.2E-152 T 14-10-2018 GYO_2815 edfa5513633e124afea96927ad7f159c 611 Gene3D G3DSA:2.60.34.10 348 476 1.4E-58 T 14-10-2018 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily Reactome: R-HSA-3371453 GYO_0531 02f3fe63b7faeb39b2eb88517e96382d 300 Pfam PF03773 Predicted permease 13 299 1.0E-91 T 14-10-2018 IPR005524 Predicted permease DUF318 GYO_4196 9ee5ebf2dec6dc06d0c3b2766de25000 256 ProSitePatterns PS01005 Formate and nitrite transporters signature 1. 76 85 - T 14-10-2018 IPR024002 Formate/nitrite transporter, conserved site GYO_4196 9ee5ebf2dec6dc06d0c3b2766de25000 256 Pfam PF01226 Formate/nitrite transporter 6 250 5.0E-61 T 14-10-2018 IPR000292 Formate/nitrite transporter GO:0016020|GO:0022857|GO:0055085 GYO_4196 9ee5ebf2dec6dc06d0c3b2766de25000 256 TIGRFAM TIGR00790 fnt: formate/nitrite transporter 22 254 2.9E-81 T 14-10-2018 IPR000292 Formate/nitrite transporter GO:0016020|GO:0022857|GO:0055085 GYO_4196 9ee5ebf2dec6dc06d0c3b2766de25000 256 Gene3D G3DSA:1.20.1080.10 1 256 3.4E-74 T 14-10-2018 IPR023271 Aquaporin-like Reactome: R-HSA-432047 GYO_4196 9ee5ebf2dec6dc06d0c3b2766de25000 256 ProSitePatterns PS01006 Formate and nitrite transporters signature 2. 160 170 - T 14-10-2018 IPR024002 Formate/nitrite transporter, conserved site GYO_0054 65a049d32aacd941200903bbea93f6de 54 ProSitePatterns PS00304 Small, acid-soluble spore proteins, alpha/beta type, signature 1. 6 15 - T 14-10-2018 IPR018126 Small acid-soluble spore protein, alpha/beta-type, conserved site GO:0003690|GO:0006265 GYO_0054 65a049d32aacd941200903bbea93f6de 54 Pfam PF00269 Small, acid-soluble spore proteins, alpha/beta type 3 47 1.8E-8 T 14-10-2018 IPR001448 Small acid-soluble spore protein, alpha/beta-type GO:0003690|GO:0006265 GYO_0054 65a049d32aacd941200903bbea93f6de 54 Gene3D G3DSA:1.10.8.910 1 54 7.9E-7 T 14-10-2018 IPR038300 SASP, alpha/beta-type superfamily GYO_0078 9a95b5eab51cce3fb1cf1ba0c3258493 245 Pfam PF00092 von Willebrand factor type A domain 7 77 2.1E-5 T 14-10-2018 IPR002035 von Willebrand factor, type A GYO_0078 9a95b5eab51cce3fb1cf1ba0c3258493 245 SUPERFAMILY SSF53300 4 71 1.93E-9 T 14-10-2018 IPR036465 von Willebrand factor A-like domain superfamily GYO_0078 9a95b5eab51cce3fb1cf1ba0c3258493 245 SUPERFAMILY SSF53300 133 226 5.04E-10 T 14-10-2018 IPR036465 von Willebrand factor A-like domain superfamily GYO_0078 9a95b5eab51cce3fb1cf1ba0c3258493 245 Gene3D G3DSA:3.40.50.410 1 240 2.7E-58 T 14-10-2018 IPR036465 von Willebrand factor A-like domain superfamily GYO_2400 45989b6e6fa8f996e50b85bd84209ee5 422 Pfam PF00585 C-terminal regulatory domain of Threonine dehydratase 329 421 7.8E-31 T 14-10-2018 IPR001721 Threonine dehydratase, ACT-like domain KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19 GYO_2400 45989b6e6fa8f996e50b85bd84209ee5 422 TIGRFAM TIGR02079 THD1: threonine dehydratase 14 422 5.4E-195 T 14-10-2018 IPR011820 L-threonine dehydratase biosynthetic IlvA GO:0004794 KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19 GYO_2400 45989b6e6fa8f996e50b85bd84209ee5 422 SUPERFAMILY SSF53686 13 366 1.06E-100 T 14-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme GYO_2400 45989b6e6fa8f996e50b85bd84209ee5 422 ProSitePatterns PS00165 Serine/threonine dehydratases pyridoxal-phosphate attachment site. 51 64 - T 14-10-2018 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site GO:0006520|GO:0030170 GYO_2400 45989b6e6fa8f996e50b85bd84209ee5 422 Gene3D G3DSA:3.40.50.1100 23 326 8.1E-119 T 14-10-2018 GYO_2400 45989b6e6fa8f996e50b85bd84209ee5 422 Gene3D G3DSA:3.40.50.1100 59 158 8.1E-119 T 14-10-2018 GYO_2400 45989b6e6fa8f996e50b85bd84209ee5 422 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 27 316 3.6E-76 T 14-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme GYO_3848 3aab7e52d5901ead71b6e6b69cbfb352 119 Pfam PF04020 Mycobacterial 4 TMS phage holin, superfamily IV 3 106 1.6E-27 T 14-10-2018 IPR007165 Mycobacterial 4 TMS phage holin, superfamily IV GYO_2334 706f512edafb278aa900bc32be7fe549 632 SUPERFAMILY SSF48239 35 301 2.56E-46 T 14-10-2018 IPR008930 Terpenoid cyclases/protein prenyltransferase alpha-alpha toroid GYO_2334 706f512edafb278aa900bc32be7fe549 632 Gene3D G3DSA:1.50.10.20 17 620 4.5E-188 T 14-10-2018 GYO_2334 706f512edafb278aa900bc32be7fe549 632 SUPERFAMILY SSF48239 306 623 4.24E-84 T 14-10-2018 IPR008930 Terpenoid cyclases/protein prenyltransferase alpha-alpha toroid GYO_2334 706f512edafb278aa900bc32be7fe549 632 TIGRFAM TIGR01787 squalene_cyclas: squalene/oxidosqualene cyclases 19 620 2.7E-109 T 14-10-2018 IPR018333 Squalene cyclase GO:0016866 Reactome: R-HSA-191273|Reactome: R-HSA-2426168 GYO_2334 706f512edafb278aa900bc32be7fe549 632 Gene3D G3DSA:1.50.10.20 33 308 4.5E-188 T 14-10-2018 GYO_2334 706f512edafb278aa900bc32be7fe549 632 Pfam PF13249 Squalene-hopene cyclase N-terminal domain 17 298 1.0E-58 T 14-10-2018 IPR032697 Squalene cyclase, N-terminal Reactome: R-HSA-191273|Reactome: R-HSA-2426168 GYO_2334 706f512edafb278aa900bc32be7fe549 632 Pfam PF13243 Squalene-hopene cyclase C-terminal domain 310 621 1.8E-89 T 14-10-2018 IPR032696 Squalene cyclase, C-terminal Reactome: R-HSA-191273|Reactome: R-HSA-2426168 GYO_3478 4e1f78a86442d705aabbfa246cd06640 1214 Gene3D G3DSA:3.40.50.300 340 672 6.5E-78 T 14-10-2018 GYO_3478 4e1f78a86442d705aabbfa246cd06640 1214 Gene3D G3DSA:3.40.50.300 977 1206 2.0E-21 T 14-10-2018 GYO_3478 4e1f78a86442d705aabbfa246cd06640 1214 SUPERFAMILY SSF52540 679 906 6.2E-11 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase GYO_3478 4e1f78a86442d705aabbfa246cd06640 1214 TIGRFAM TIGR03928 T7_EssCb_Firm: type VII secretion protein EssC 1 1204 0.0 T 14-10-2018 IPR023839 Firmicutes EssC, C-terminal GYO_3478 4e1f78a86442d705aabbfa246cd06640 1214 SUPERFAMILY SSF52540 963 1129 2.15E-8 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase GYO_3478 4e1f78a86442d705aabbfa246cd06640 1214 Pfam PF01580 FtsK/SpoIIIE family 716 881 3.8E-22 T 14-10-2018 IPR002543 FtsK domain GO:0000166|GO:0003677|GO:0005524 GYO_3478 4e1f78a86442d705aabbfa246cd06640 1214 Pfam PF01580 FtsK/SpoIIIE family 980 1083 4.8E-6 T 14-10-2018 IPR002543 FtsK domain GO:0000166|GO:0003677|GO:0005524 GYO_3478 4e1f78a86442d705aabbfa246cd06640 1214 Pfam PF01580 FtsK/SpoIIIE family 364 570 1.7E-30 T 14-10-2018 IPR002543 FtsK domain GO:0000166|GO:0003677|GO:0005524 GYO_3478 4e1f78a86442d705aabbfa246cd06640 1214 SUPERFAMILY SSF52540 361 620 7.94E-31 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase GYO_3478 4e1f78a86442d705aabbfa246cd06640 1214 Gene3D G3DSA:3.40.50.300 679 966 7.6E-61 T 14-10-2018 GYO_3894 54a3a427efd853db5c39398235626473 385 Gene3D G3DSA:3.30.565.10 246 384 2.5E-28 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily GYO_3894 54a3a427efd853db5c39398235626473 385 SUPERFAMILY SSF55874 255 383 1.96E-20 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily GYO_3894 54a3a427efd853db5c39398235626473 385 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 291 384 3.1E-10 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase GYO_3894 54a3a427efd853db5c39398235626473 385 Pfam PF05384 Sensor protein DegS 12 170 1.0E-57 T 14-10-2018 IPR008595 Sensor DegS GO:0007165|GO:0016301 GYO_3894 54a3a427efd853db5c39398235626473 385 PIRSF PIRSF003169 1 385 9.9E-166 T 14-10-2018 IPR016381 Signal transduction histidine kinase, DegS GO:0000155|GO:0000160|GO:0004673 GYO_3894 54a3a427efd853db5c39398235626473 385 Pfam PF07730 Histidine kinase 180 248 2.3E-16 T 14-10-2018 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 GYO_3894 54a3a427efd853db5c39398235626473 385 SMART SM00387 289 385 1.1E-10 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase GYO_3348 b7393bf5dd8e9773436472d366658892 155 PIRSF PIRSF005859 1 155 1.0E-39 T 14-10-2018 IPR004307 TspO/MBR-related protein GO:0016021 GYO_3348 b7393bf5dd8e9773436472d366658892 155 Gene3D G3DSA:1.20.1260.100 1 155 1.3E-31 T 14-10-2018 IPR038330 TspO/MBR-related superfamily GYO_3348 b7393bf5dd8e9773436472d366658892 155 Pfam PF03073 TspO/MBR family 11 151 3.9E-30 T 14-10-2018 IPR004307 TspO/MBR-related protein GO:0016021 GYO_2774 f81a39ccb64f3e8992742adb34503d63 145 Gene3D G3DSA:1.10.10.10 1 83 9.6E-18 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily GYO_2774 f81a39ccb64f3e8992742adb34503d63 145 SUPERFAMILY SSF46785 5 134 2.45E-34 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily GYO_2774 f81a39ccb64f3e8992742adb34503d63 145 Gene3D G3DSA:3.30.1490.190 87 141 4.5E-14 T 14-10-2018 GYO_2774 f81a39ccb64f3e8992742adb34503d63 145 Pfam PF01475 Ferric uptake regulator family 12 129 1.7E-28 T 14-10-2018 IPR002481 Ferric-uptake regulator GO:0003700|GO:0006355 GYO_2023 25920a42d11bdb0a6ddb5238cf7de84c 309 Pfam PF16198 tRNA pseudouridylate synthase B C-terminal domain 179 237 3.5E-12 T 14-10-2018 IPR032819 tRNA pseudouridylate synthase B, C-terminal Reactome: R-HSA-171319|Reactome: R-HSA-6790901 GYO_2023 25920a42d11bdb0a6ddb5238cf7de84c 309 Hamap MF_01080 tRNA pseudouridine synthase B [truB]. 2 303 19.001 T 14-10-2018 IPR014780 tRNA pseudouridine synthase II, TruB GO:0001522|GO:0003723|GO:0009451|GO:0009982 GYO_2023 25920a42d11bdb0a6ddb5238cf7de84c 309 Gene3D G3DSA:3.30.2350.10 1 244 2.6E-92 T 14-10-2018 GYO_2023 25920a42d11bdb0a6ddb5238cf7de84c 309 TIGRFAM TIGR00431 TruB: tRNA pseudouridine(55) synthase 2 217 5.4E-94 T 14-10-2018 IPR014780 tRNA pseudouridine synthase II, TruB GO:0001522|GO:0003723|GO:0009451|GO:0009982 GYO_2023 25920a42d11bdb0a6ddb5238cf7de84c 309 Pfam PF01509 TruB family pseudouridylate synthase (N terminal domain) 24 178 1.9E-58 T 14-10-2018 IPR002501 Pseudouridine synthase II, N-terminal GO:0006396 GYO_2023 25920a42d11bdb0a6ddb5238cf7de84c 309 SUPERFAMILY SSF55120 1 236 1.14E-80 T 14-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 GYO_2763 3d3f38d6a53a180e823e5665584f50f7 309 SUPERFAMILY SSF161098 31 303 4.06E-39 T 14-10-2018 IPR035906 MetI-like superfamily GYO_2763 3d3f38d6a53a180e823e5665584f50f7 309 Gene3D G3DSA:1.10.3720.10 83 308 1.5E-38 T 14-10-2018 IPR035906 MetI-like superfamily GYO_2763 3d3f38d6a53a180e823e5665584f50f7 309 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 107 308 9.8E-33 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 GYO_2763 3d3f38d6a53a180e823e5665584f50f7 309 TIGRFAM TIGR02138 phosphate_pstC: phosphate ABC transporter, permease protein PstC 29 307 1.8E-90 T 14-10-2018 IPR011864 Phosphate ABC transporter, permease protein PstC GO:0005315|GO:0006817|GO:0016021 GYO_2397 127f847eb4f43ceccbe4f019c2832305 255 SUPERFAMILY SSF52266 38 249 1.04E-33 T 14-10-2018 GYO_2397 127f847eb4f43ceccbe4f019c2832305 255 Pfam PF13472 GDSL-like Lipase/Acylhydrolase family 45 237 1.1E-22 T 14-10-2018 IPR013830 SGNH hydrolase-type esterase domain GYO_2397 127f847eb4f43ceccbe4f019c2832305 255 Gene3D G3DSA:3.40.50.1110 19 250 1.9E-35 T 14-10-2018 IPR036514 SGNH hydrolase superfamily GYO_2980 5d1a5b2a6a0f761c9927d0a788270841 138 Hamap MF_00651 Putative pre-16S rRNA nuclease [yqgF]. 1 138 27.972 T 14-10-2018 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 GYO_2980 5d1a5b2a6a0f761c9927d0a788270841 138 Pfam PF03652 Holliday junction resolvase 1 136 1.3E-44 T 14-10-2018 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 GYO_2980 5d1a5b2a6a0f761c9927d0a788270841 138 TIGRFAM TIGR00250 RNAse_H_YqgF: putative transcription antitermination factor YqgF 4 135 7.3E-62 T 14-10-2018 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 GYO_2980 5d1a5b2a6a0f761c9927d0a788270841 138 Gene3D G3DSA:3.30.420.140 1 138 1.0E-52 T 14-10-2018 IPR037027 YqgF/RNase H-like domain superfamily GO:0006139 GYO_2980 5d1a5b2a6a0f761c9927d0a788270841 138 SMART SM00732 1 103 1.2E-39 T 14-10-2018 IPR006641 YqgF/RNase H-like domain GO:0006139 GYO_2980 5d1a5b2a6a0f761c9927d0a788270841 138 SUPERFAMILY SSF53098 1 137 3.95E-45 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily GYO_4102 fcacc43520eff00abc89c0376934d4fc 574 Gene3D G3DSA:1.20.1560.10 1 315 5.0E-80 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 GYO_4102 fcacc43520eff00abc89c0376934d4fc 574 Pfam PF00005 ABC transporter 349 498 6.1E-37 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 GYO_4102 fcacc43520eff00abc89c0376934d4fc 574 ProSitePatterns PS00211 ABC transporters family signature. 470 484 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 GYO_4102 fcacc43520eff00abc89c0376934d4fc 574 SMART SM00382 358 544 9.9E-16 T 14-10-2018 IPR003593 AAA+ ATPase domain GYO_4102 fcacc43520eff00abc89c0376934d4fc 574 SUPERFAMILY SSF52540 324 569 2.02E-92 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase GYO_4102 fcacc43520eff00abc89c0376934d4fc 574 Gene3D G3DSA:3.40.50.300 329 574 3.3E-92 T 14-10-2018 GYO_4102 fcacc43520eff00abc89c0376934d4fc 574 Pfam PF00664 ABC transporter transmembrane region 17 286 2.9E-61 T 14-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 GYO_4102 fcacc43520eff00abc89c0376934d4fc 574 SUPERFAMILY SSF90123 3 321 5.23E-77 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 GYO_4057 336d6732b6bec12d36abbf809121a126 502 Gene3D G3DSA:1.20.150.20 372 499 6.8E-52 T 14-10-2018 IPR038376 ATP synthase, alpha subunit, C-terminal domain superfamily KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 GYO_4057 336d6732b6bec12d36abbf809121a126 502 TIGRFAM TIGR00962 atpA: ATP synthase F1, alpha subunit 3 499 3.9E-264 T 14-10-2018 IPR005294 ATP synthase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 GYO_4057 336d6732b6bec12d36abbf809121a126 502 SUPERFAMILY SSF47917 372 499 5.23E-48 T 14-10-2018 GYO_4057 336d6732b6bec12d36abbf809121a126 502 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 355 364 - T 14-10-2018 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 GYO_4057 336d6732b6bec12d36abbf809121a126 502 Pfam PF00306 ATP synthase alpha/beta chain, C terminal domain 371 491 2.2E-47 T 14-10-2018 IPR000793 ATP synthase, alpha subunit, C-terminal GO:0015986 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 GYO_4057 336d6732b6bec12d36abbf809121a126 502 SUPERFAMILY SSF52540 95 370 7.17E-99 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase GYO_4057 336d6732b6bec12d36abbf809121a126 502 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 149 364 5.6E-74 T 14-10-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 GYO_4057 336d6732b6bec12d36abbf809121a126 502 SUPERFAMILY SSF50615 10 94 4.91E-31 T 14-10-2018 IPR036121 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamily GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 GYO_4057 336d6732b6bec12d36abbf809121a126 502 PIRSF PIRSF039088 1 501 5.1E-249 T 14-10-2018 IPR005294 ATP synthase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 GYO_4057 336d6732b6bec12d36abbf809121a126 502 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 25 92 4.1E-21 T 14-10-2018 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 GYO_4057 336d6732b6bec12d36abbf809121a126 502 Gene3D G3DSA:2.40.30.20 1 93 1.6E-37 T 14-10-2018 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 GYO_4057 336d6732b6bec12d36abbf809121a126 502 Hamap MF_01346 ATP synthase subunit alpha [atpA]. 1 499 51.445 T 14-10-2018 IPR005294 ATP synthase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 GYO_4057 336d6732b6bec12d36abbf809121a126 502 Gene3D G3DSA:3.40.50.300 94 371 2.8E-128 T 14-10-2018 GYO_2843 5dce7bfd8ca4fc8e726f325f217156fd 297 Gene3D G3DSA:3.40.50.720 1 165 4.9E-50 T 14-10-2018 GYO_2843 5dce7bfd8ca4fc8e726f325f217156fd 297 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 2 152 1.7E-40 T 14-10-2018 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0050661 GYO_2843 5dce7bfd8ca4fc8e726f325f217156fd 297 Gene3D G3DSA:1.10.1040.10 166 296 4.7E-48 T 14-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 GYO_2843 5dce7bfd8ca4fc8e726f325f217156fd 297 ProSitePatterns PS00461 6-phosphogluconate dehydrogenase signature. 234 246 - T 14-10-2018 IPR006184 6-phosphogluconate-binding site GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 GYO_2843 5dce7bfd8ca4fc8e726f325f217156fd 297 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 1 15 2.0E-22 T 14-10-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0004616|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 GYO_2843 5dce7bfd8ca4fc8e726f325f217156fd 297 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 58 87 2.0E-22 T 14-10-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0004616|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 GYO_2843 5dce7bfd8ca4fc8e726f325f217156fd 297 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 230 257 2.0E-22 T 14-10-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0004616|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 GYO_2843 5dce7bfd8ca4fc8e726f325f217156fd 297 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 155 183 2.0E-22 T 14-10-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0004616|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 GYO_2843 5dce7bfd8ca4fc8e726f325f217156fd 297 SUPERFAMILY SSF48179 164 295 8.5E-39 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 GYO_2843 5dce7bfd8ca4fc8e726f325f217156fd 297 SMART SM01350 166 294 1.6E-5 T 14-10-2018 IPR006114 6-phosphogluconate dehydrogenase, C-terminal GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 GYO_2843 5dce7bfd8ca4fc8e726f325f217156fd 297 SUPERFAMILY SSF51735 1 152 3.38E-44 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily GYO_2843 5dce7bfd8ca4fc8e726f325f217156fd 297 Pfam PF00393 6-phosphogluconate dehydrogenase, C-terminal domain 166 275 4.1E-22 T 14-10-2018 IPR006114 6-phosphogluconate dehydrogenase, C-terminal GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 GYO_2843 5dce7bfd8ca4fc8e726f325f217156fd 297 TIGRFAM TIGR00872 gnd_rel: 6-phosphogluconate dehydrogenase (decarboxylating) 1 297 3.0E-159 T 14-10-2018 IPR004849 6-phosphogluconate dehydrogenase, YqeC-type GO:0055114 GYO_2075 2013299bb583faa36afe30297853b63d 4260 SMART SM00825 Beta-ketoacyl synthase 400 838 1.2E-194 T 14-10-2018 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain GYO_2075 2013299bb583faa36afe30297853b63d 4260 SMART SM00825 Beta-ketoacyl synthase 3527 3942 4.1E-156 T 14-10-2018 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain GYO_2075 2013299bb583faa36afe30297853b63d 4260 SMART SM00825 Beta-ketoacyl synthase 2317 2732 1.2E-186 T 14-10-2018 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain GYO_2075 2013299bb583faa36afe30297853b63d 4260 Pfam PF16197 Ketoacyl-synthetase C-terminal extension 2678 2786 2.1E-11 T 14-10-2018 IPR032821 Ketoacyl-synthetase, C-terminal extension Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 GYO_2075 2013299bb583faa36afe30297853b63d 4260 Pfam PF16197 Ketoacyl-synthetase C-terminal extension 3892 4007 2.3E-10 T 14-10-2018 IPR032821 Ketoacyl-synthetase, C-terminal extension Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 GYO_2075 2013299bb583faa36afe30297853b63d 4260 Pfam PF16197 Ketoacyl-synthetase C-terminal extension 780 901 1.2E-7 T 14-10-2018 IPR032821 Ketoacyl-synthetase, C-terminal extension Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 GYO_2075 2013299bb583faa36afe30297853b63d 4260 Pfam PF14765 Polyketide synthase dehydratase 13 269 1.5E-17 T 14-10-2018 IPR020807 Polyketide synthase, dehydratase domain Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 GYO_2075 2013299bb583faa36afe30297853b63d 4260 Pfam PF14765 Polyketide synthase dehydratase 1004 1294 2.3E-65 T 14-10-2018 IPR020807 Polyketide synthase, dehydratase domain Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 GYO_2075 2013299bb583faa36afe30297853b63d 4260 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 3676 3692 - T 14-10-2018 IPR018201 Beta-ketoacyl synthase, active site GYO_2075 2013299bb583faa36afe30297853b63d 4260 Gene3D G3DSA:3.10.129.110 1010 1298 4.2E-87 T 14-10-2018 GYO_2075 2013299bb583faa36afe30297853b63d 4260 SMART SM00823 Phosphopantetheine attachment site 296 367 1.9E-6 T 14-10-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 GYO_2075 2013299bb583faa36afe30297853b63d 4260 SMART SM00823 Phosphopantetheine attachment site 4139 4210 0.073 T 14-10-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 GYO_2075 2013299bb583faa36afe30297853b63d 4260 SMART SM00823 Phosphopantetheine attachment site 3410 3481 6.2E-6 T 14-10-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 GYO_2075 2013299bb583faa36afe30297853b63d 4260 SMART SM00823 Phosphopantetheine attachment site 2186 2256 1.6E-9 T 14-10-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 GYO_2075 2013299bb583faa36afe30297853b63d 4260 Gene3D G3DSA:3.40.50.150 1827 2123 1.5E-48 T 14-10-2018 GYO_2075 2013299bb583faa36afe30297853b63d 4260 SUPERFAMILY SSF53901 2313 2727 1.71E-91 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 GYO_2075 2013299bb583faa36afe30297853b63d 4260 SUPERFAMILY SSF53901 397 767 1.31E-90 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 GYO_2075 2013299bb583faa36afe30297853b63d 4260 Pfam PF08659 KR domain 3140 3319 4.2E-48 T 14-10-2018 IPR013968 Polyketide synthase, ketoreductase domain Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 GYO_2075 2013299bb583faa36afe30297853b63d 4260 Pfam PF08659 KR domain 1518 1696 6.4E-41 T 14-10-2018 IPR013968 Polyketide synthase, ketoreductase domain Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 GYO_2075 2013299bb583faa36afe30297853b63d 4260 Gene3D G3DSA:3.30.70.3050 4000 4096 1.9E-217 T 14-10-2018 GYO_2075 2013299bb583faa36afe30297853b63d 4260 SUPERFAMILY SSF47336 3409 3539 3.53E-12 T 14-10-2018 IPR036736 ACP-like superfamily GYO_2075 2013299bb583faa36afe30297853b63d 4260 ProSitePatterns PS00012 Phosphopantetheine attachment site. 2212 2227 - T 14-10-2018 IPR006162 Phosphopantetheine attachment site GYO_2075 2013299bb583faa36afe30297853b63d 4260 SMART SM00826 1004 1171 2.7E-20 T 14-10-2018 IPR020807 Polyketide synthase, dehydratase domain Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 GYO_2075 2013299bb583faa36afe30297853b63d 4260 Gene3D G3DSA:3.10.129.110 1 265 1.6E-76 T 14-10-2018 GYO_2075 2013299bb583faa36afe30297853b63d 4260 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 2462 2478 - T 14-10-2018 IPR018201 Beta-ketoacyl synthase, active site GYO_2075 2013299bb583faa36afe30297853b63d 4260 SUPERFAMILY SSF47336 290 411 4.58E-16 T 14-10-2018 IPR036736 ACP-like superfamily GYO_2075 2013299bb583faa36afe30297853b63d 4260 Gene3D G3DSA:1.10.1200.10 4118 4219 3.3E-15 T 14-10-2018 IPR036736 ACP-like superfamily GYO_2075 2013299bb583faa36afe30297853b63d 4260 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 398 651 1.0E-88 T 14-10-2018 IPR014030 Beta-ketoacyl synthase, N-terminal GYO_2075 2013299bb583faa36afe30297853b63d 4260 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 3525 3763 5.2E-82 T 14-10-2018 IPR014030 Beta-ketoacyl synthase, N-terminal GYO_2075 2013299bb583faa36afe30297853b63d 4260 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 2315 2549 1.8E-83 T 14-10-2018 IPR014030 Beta-ketoacyl synthase, N-terminal GYO_2075 2013299bb583faa36afe30297853b63d 4260 Gene3D G3DSA:1.10.1200.10 2171 2258 2.1E-16 T 14-10-2018 IPR036736 ACP-like superfamily GYO_2075 2013299bb583faa36afe30297853b63d 4260 Gene3D G3DSA:3.40.50.720 1299 1749 2.2E-82 T 14-10-2018 GYO_2075 2013299bb583faa36afe30297853b63d 4260 SUPERFAMILY SSF47336 4136 4234 2.36E-12 T 14-10-2018 IPR036736 ACP-like superfamily GYO_2075 2013299bb583faa36afe30297853b63d 4260 SUPERFAMILY SSF51735 3139 3359 1.28E-34 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily GYO_2075 2013299bb583faa36afe30297853b63d 4260 Gene3D G3DSA:1.10.1200.10 3396 3478 4.5E-11 T 14-10-2018 IPR036736 ACP-like superfamily GYO_2075 2013299bb583faa36afe30297853b63d 4260 Gene3D G3DSA:1.10.1200.10 282 368 1.9E-19 T 14-10-2018 IPR036736 ACP-like superfamily GYO_2075 2013299bb583faa36afe30297853b63d 4260 ProSitePatterns PS00098 Thiolases acyl-enzyme intermediate signature. 3681 3699 - T 14-10-2018 IPR020615 Thiolase, acyl-enzyme intermediate active site GO:0016747 GYO_2075 2013299bb583faa36afe30297853b63d 4260 Gene3D G3DSA:3.30.70.3290 854 976 1.8E-248 T 14-10-2018 GYO_2075 2013299bb583faa36afe30297853b63d 4260 Gene3D G3DSA:3.30.70.3290 2746 2883 2.9E-245 T 14-10-2018 GYO_2075 2013299bb583faa36afe30297853b63d 4260 SUPERFAMILY SSF51735 1313 1504 6.04E-18 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily GYO_2075 2013299bb583faa36afe30297853b63d 4260 Gene3D G3DSA:3.40.47.10 400 988 1.8E-248 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 GYO_2075 2013299bb583faa36afe30297853b63d 4260 SMART SM01294 297 363 2.4E-5 T 14-10-2018 GYO_2075 2013299bb583faa36afe30297853b63d 4260 SUPERFAMILY SSF53901 3522 3878 1.87E-83 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 GYO_2075 2013299bb583faa36afe30297853b63d 4260 SUPERFAMILY SSF53335 1924 2118 1.35E-27 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase GYO_2075 2013299bb583faa36afe30297853b63d 4260 Pfam PF00550 Phosphopantetheine attachment site 3412 3476 2.9E-10 T 14-10-2018 IPR009081 Phosphopantetheine binding ACP domain GYO_2075 2013299bb583faa36afe30297853b63d 4260 Pfam PF00550 Phosphopantetheine attachment site 2188 2252 1.1E-10 T 14-10-2018 IPR009081 Phosphopantetheine binding ACP domain GYO_2075 2013299bb583faa36afe30297853b63d 4260 Pfam PF00550 Phosphopantetheine attachment site 298 363 8.1E-13 T 14-10-2018 IPR009081 Phosphopantetheine binding ACP domain GYO_2075 2013299bb583faa36afe30297853b63d 4260 Pfam PF00550 Phosphopantetheine attachment site 4142 4206 3.5E-11 T 14-10-2018 IPR009081 Phosphopantetheine binding ACP domain GYO_2075 2013299bb583faa36afe30297853b63d 4260 Gene3D G3DSA:3.40.47.10 3526 4107 1.9E-217 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 GYO_2075 2013299bb583faa36afe30297853b63d 4260 Gene3D G3DSA:3.40.50.720 2953 3376 2.6E-91 T 14-10-2018 GYO_2075 2013299bb583faa36afe30297853b63d 4260 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 2557 2674 1.7E-39 T 14-10-2018 IPR014031 Beta-ketoacyl synthase, C-terminal GYO_2075 2013299bb583faa36afe30297853b63d 4260 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 659 776 3.1E-41 T 14-10-2018 IPR014031 Beta-ketoacyl synthase, C-terminal GYO_2075 2013299bb583faa36afe30297853b63d 4260 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 3771 3888 2.3E-37 T 14-10-2018 IPR014031 Beta-ketoacyl synthase, C-terminal GYO_2075 2013299bb583faa36afe30297853b63d 4260 Pfam PF08242 Methyltransferase domain 1957 2061 1.9E-15 T 14-10-2018 IPR013217 Methyltransferase type 12 GYO_2075 2013299bb583faa36afe30297853b63d 4260 SUPERFAMILY SSF51735 1515 1738 6.07E-34 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily GYO_2075 2013299bb583faa36afe30297853b63d 4260 SUPERFAMILY SSF47336 2186 2256 4.84E-12 T 14-10-2018 IPR036736 ACP-like superfamily GYO_2075 2013299bb583faa36afe30297853b63d 4260 Gene3D G3DSA:3.40.47.10 2317 2895 2.9E-245 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 GYO_2075 2013299bb583faa36afe30297853b63d 4260 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 3140 3320 1.3E-40 T 14-10-2018 GYO_2075 2013299bb583faa36afe30297853b63d 4260 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 1518 1698 9.6E-32 T 14-10-2018 GYO_1698 962054fe0119353ef09df316ddeb6f65 658 SUPERFAMILY SSF52540 32 308 2.23E-67 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase GYO_1698 962054fe0119353ef09df316ddeb6f65 658 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 568 639 2.1E-22 T 14-10-2018 IPR019489 Clp ATPase, C-terminal GYO_1698 962054fe0119353ef09df316ddeb6f65 658 Gene3D G3DSA:1.10.8.60 213 300 1.5E-27 T 14-10-2018 GYO_1698 962054fe0119353ef09df316ddeb6f65 658 Gene3D G3DSA:3.40.50.300 327 566 1.2E-90 T 14-10-2018 GYO_1698 962054fe0119353ef09df316ddeb6f65 658 Pfam PF02151 UvrB/uvrC motif 285 319 1.8E-6 T 14-10-2018 IPR001943 UVR domain GO:0005515 GYO_1698 962054fe0119353ef09df316ddeb6f65 658 ProSitePatterns PS00871 Chaperonins clpA/B signature 2. 431 449 - T 14-10-2018 IPR028299 ClpA/B, conserved site 2 GYO_1698 962054fe0119353ef09df316ddeb6f65 658 SUPERFAMILY SSF52540 346 638 5.12E-79 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase GYO_1698 962054fe0119353ef09df316ddeb6f65 658 Gene3D G3DSA:3.40.50.300 20 212 7.8E-67 T 14-10-2018 GYO_1698 962054fe0119353ef09df316ddeb6f65 658 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 165 177 - T 14-10-2018 IPR018368 ClpA/B, conserved site 1 GO:0005524 GYO_1698 962054fe0119353ef09df316ddeb6f65 658 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 75 206 3.1E-13 T 14-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 GYO_1698 962054fe0119353ef09df316ddeb6f65 658 Pfam PF07724 AAA domain (Cdc48 subfamily) 396 562 1.0E-52 T 14-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 GYO_1698 962054fe0119353ef09df316ddeb6f65 658 SMART SM01086 568 655 2.9E-29 T 14-10-2018 IPR019489 Clp ATPase, C-terminal GYO_1698 962054fe0119353ef09df316ddeb6f65 658 SMART SM00382 70 214 6.9E-12 T 14-10-2018 IPR003593 AAA+ ATPase domain GYO_1698 962054fe0119353ef09df316ddeb6f65 658 SMART SM00382 397 569 2.6E-12 T 14-10-2018 IPR003593 AAA+ ATPase domain GYO_1698 962054fe0119353ef09df316ddeb6f65 658 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 475 493 9.8E-37 T 14-10-2018 IPR001270 ClpA/B family GO:0005524 GYO_1698 962054fe0119353ef09df316ddeb6f65 658 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 446 464 9.8E-37 T 14-10-2018 IPR001270 ClpA/B family GO:0005524 GYO_1698 962054fe0119353ef09df316ddeb6f65 658 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 508 522 9.8E-37 T 14-10-2018 IPR001270 ClpA/B family GO:0005524 GYO_1698 962054fe0119353ef09df316ddeb6f65 658 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 401 419 9.8E-37 T 14-10-2018 IPR001270 ClpA/B family GO:0005524 GYO_1698 962054fe0119353ef09df316ddeb6f65 658 Gene3D G3DSA:1.10.8.60 568 658 4.8E-23 T 14-10-2018 GYO_1904 4405a7baa82a5b45ffb3997d643a3508 239 SMART SM00934 5 230 5.2E-89 T 14-10-2018 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 GYO_1904 4405a7baa82a5b45ffb3997d643a3508 239 TIGRFAM TIGR01740 pyrF: orotidine 5'-phosphate decarboxylase 6 231 4.4E-63 T 14-10-2018 IPR014732 Orotidine 5'-phosphate decarboxylase GO:0004590|GO:0044205 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 GYO_1904 4405a7baa82a5b45ffb3997d643a3508 239 SUPERFAMILY SSF51366 1 235 8.32E-70 T 14-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 GYO_1904 4405a7baa82a5b45ffb3997d643a3508 239 ProSitePatterns PS00156 Orotidine 5'-phosphate decarboxylase active site. 57 70 - T 14-10-2018 IPR018089 Orotidine 5'-phosphate decarboxylase, active site GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 GYO_1904 4405a7baa82a5b45ffb3997d643a3508 239 Hamap MF_01200_B Orotidine 5'-phosphate decarboxylase [pyrF]. 3 235 39.123 T 14-10-2018 IPR014732 Orotidine 5'-phosphate decarboxylase GO:0004590|GO:0044205 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 GYO_1904 4405a7baa82a5b45ffb3997d643a3508 239 Pfam PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family 7 229 8.4E-48 T 14-10-2018 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 GYO_1904 4405a7baa82a5b45ffb3997d643a3508 239 Gene3D G3DSA:3.20.20.70 1 238 3.8E-78 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 GYO_4237 23a3f928f9364dc143bf5e20a99bf600 645 ProSitePatterns PS00137 Serine proteases, subtilase family, histidine active site. 172 182 - T 14-10-2018 IPR022398 Peptidase S8, subtilisin, His-active site GYO_4237 23a3f928f9364dc143bf5e20a99bf600 645 Gene3D G3DSA:1.10.10.1270 538 589 1.3E-12 T 14-10-2018 GYO_4237 23a3f928f9364dc143bf5e20a99bf600 645 Gene3D G3DSA:1.10.10.1270 489 537 4.3E-8 T 14-10-2018 GYO_4237 23a3f928f9364dc143bf5e20a99bf600 645 Gene3D G3DSA:1.10.10.1270 434 488 4.4E-11 T 14-10-2018 GYO_4237 23a3f928f9364dc143bf5e20a99bf600 645 Gene3D G3DSA:1.10.10.1270 591 645 5.6E-10 T 14-10-2018 GYO_4237 23a3f928f9364dc143bf5e20a99bf600 645 ProSitePatterns PS00138 Serine proteases, subtilase family, serine active site. 324 334 - T 14-10-2018 IPR023828 Peptidase S8, subtilisin, Ser-active site GYO_4237 23a3f928f9364dc143bf5e20a99bf600 645 Pfam PF00082 Subtilase family 133 374 4.0E-54 T 14-10-2018 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 GYO_4237 23a3f928f9364dc143bf5e20a99bf600 645 Gene3D G3DSA:3.40.50.200 112 382 1.7E-87 T 14-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 GYO_4237 23a3f928f9364dc143bf5e20a99bf600 645 Gene3D G3DSA:3.30.70.80 26 98 2.8E-14 T 14-10-2018 IPR037045 Peptidase S8 propeptide/proteinase inhibitor I9 superfamily Reactome: R-HSA-381426|Reactome: R-HSA-8866427|Reactome: R-HSA-8957275|Reactome: R-HSA-8964038 GYO_4237 23a3f928f9364dc143bf5e20a99bf600 645 SUPERFAMILY SSF52743 114 380 2.49E-85 T 14-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 GYO_4237 23a3f928f9364dc143bf5e20a99bf600 645 PRINTS PR00723 Subtilisin serine protease family (S8) signature 168 181 9.8E-16 T 14-10-2018 IPR015500 Peptidase S8, subtilisin-related GYO_4237 23a3f928f9364dc143bf5e20a99bf600 645 PRINTS PR00723 Subtilisin serine protease family (S8) signature 133 152 9.8E-16 T 14-10-2018 IPR015500 Peptidase S8, subtilisin-related GYO_4237 23a3f928f9364dc143bf5e20a99bf600 645 PRINTS PR00723 Subtilisin serine protease family (S8) signature 323 339 9.8E-16 T 14-10-2018 IPR015500 Peptidase S8, subtilisin-related GYO_4237 23a3f928f9364dc143bf5e20a99bf600 645 ProSitePatterns PS00136 Serine proteases, subtilase family, aspartic acid active site. 138 149 - T 14-10-2018 IPR023827 Peptidase S8, subtilisin, Asp-active site GYO_4237 23a3f928f9364dc143bf5e20a99bf600 645 SUPERFAMILY SSF54897 33 93 1.36E-8 T 14-10-2018 GYO_0128 4346958451b230d7232ef9b45b9e3799 177 PRINTS PR00338 Transcription termination factor NUSG signature 57 69 2.3E-21 T 14-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 GYO_0128 4346958451b230d7232ef9b45b9e3799 177 PRINTS PR00338 Transcription termination factor NUSG signature 135 150 2.3E-21 T 14-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 GYO_0128 4346958451b230d7232ef9b45b9e3799 177 PRINTS PR00338 Transcription termination factor NUSG signature 153 169 2.3E-21 T 14-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 GYO_0128 4346958451b230d7232ef9b45b9e3799 177 Hamap MF_00948 Transcription termination/antitermination protein NusG [nusG]. 2 177 30.563 T 14-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 GYO_0128 4346958451b230d7232ef9b45b9e3799 177 SUPERFAMILY SSF82679 2 114 2.88E-41 T 14-10-2018 IPR036735 NusG, N-terminal domain superfamily GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 GYO_0128 4346958451b230d7232ef9b45b9e3799 177 Pfam PF00467 KOW motif 128 158 3.8E-8 T 14-10-2018 IPR005824 KOW GYO_0128 4346958451b230d7232ef9b45b9e3799 177 SMART SM00739 123 150 4.6E-6 T 14-10-2018 IPR005824 KOW GYO_0128 4346958451b230d7232ef9b45b9e3799 177 SMART SM00738 2 113 7.3E-54 T 14-10-2018 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 GYO_0128 4346958451b230d7232ef9b45b9e3799 177 Gene3D G3DSA:3.30.70.940 1 118 9.2E-46 T 14-10-2018 IPR036735 NusG, N-terminal domain superfamily GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 GYO_0128 4346958451b230d7232ef9b45b9e3799 177 ProSitePatterns PS01014 Transcription termination factor nusG signature. 160 169 - T 14-10-2018 IPR015869 Transcription antitermination protein, NusG, bacteria, conserved site GYO_0128 4346958451b230d7232ef9b45b9e3799 177 SUPERFAMILY SSF50104 121 177 2.96E-19 T 14-10-2018 IPR008991 Translation protein SH3-like domain superfamily GYO_0128 4346958451b230d7232ef9b45b9e3799 177 TIGRFAM TIGR00922 nusG: transcription termination/antitermination factor NusG 5 176 4.2E-69 T 14-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 GYO_0128 4346958451b230d7232ef9b45b9e3799 177 Pfam PF02357 Transcription termination factor nusG 3 109 1.8E-28 T 14-10-2018 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 GYO_0128 4346958451b230d7232ef9b45b9e3799 177 Gene3D G3DSA:2.30.30.30 119 177 1.2E-23 T 14-10-2018 IPR014722 Ribosomal protein L2, domain 2 GYO_3089 65eb3c8c055a10766ea4681b927036be 253 SUPERFAMILY SSF54292 4 112 1.99E-22 T 14-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 GYO_3089 65eb3c8c055a10766ea4681b927036be 253 Gene3D G3DSA:1.10.1060.10 114 248 7.9E-29 T 14-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 GYO_3089 65eb3c8c055a10766ea4681b927036be 253 Pfam PF13085 2Fe-2S iron-sulfur cluster binding domain 10 117 7.7E-28 T 14-10-2018 IPR025192 Succinate dehydogenase/fumarate reductase N-terminal GO:0009055|GO:0051536 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279|Reactome: R-HSA-611105|Reactome: R-HSA-71403 GYO_3089 65eb3c8c055a10766ea4681b927036be 253 TIGRFAM TIGR00384 dhsB: succinate dehydrogenase and fumarate reductase iron-sulfur protein 11 234 5.1E-41 T 14-10-2018 IPR004489 Succinate dehydrogenase/fumarate reductase iron-sulphur protein GO:0006099|GO:0016491|GO:0055114 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279|Reactome: R-HSA-611105|Reactome: R-HSA-71403 GYO_3089 65eb3c8c055a10766ea4681b927036be 253 SUPERFAMILY SSF46548 114 238 3.66E-27 T 14-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 GYO_3089 65eb3c8c055a10766ea4681b927036be 253 Pfam PF13183 4Fe-4S dicluster domain 151 226 4.1E-9 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain GYO_3089 65eb3c8c055a10766ea4681b927036be 253 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 155 166 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site GYO_3089 65eb3c8c055a10766ea4681b927036be 253 Gene3D G3DSA:3.10.20.30 1 112 8.9E-31 T 14-10-2018 IPR012675 Beta-grasp domain superfamily GYO_4317 125c0dd92d5e29b74e7457d20916984a 277 SMART SM01061 1 59 2.1E-28 T 14-10-2018 IPR004341 CAT RNA-binding domain GO:0003723 GYO_4317 125c0dd92d5e29b74e7457d20916984a 277 Gene3D G3DSA:1.10.1790.10 64 167 2.0E-42 T 14-10-2018 GYO_4317 125c0dd92d5e29b74e7457d20916984a 277 SUPERFAMILY SSF50151 1 54 1.96E-17 T 14-10-2018 IPR036650 CAT RNA-binding domain superfamily GO:0003723 GYO_4317 125c0dd92d5e29b74e7457d20916984a 277 ProSitePatterns PS00654 PRD domain signature. 98 110 - T 14-10-2018 IPR001550 Transcription antiterminator, conserved site GO:0003723|GO:0045893 GYO_4317 125c0dd92d5e29b74e7457d20916984a 277 SUPERFAMILY SSF63520 170 273 1.05E-30 T 14-10-2018 IPR036634 PRD domain superfamily GO:0006355 GYO_4317 125c0dd92d5e29b74e7457d20916984a 277 Gene3D G3DSA:1.10.1790.10 168 277 7.3E-44 T 14-10-2018 GYO_4317 125c0dd92d5e29b74e7457d20916984a 277 Pfam PF03123 CAT RNA binding domain 1 56 8.2E-23 T 14-10-2018 IPR004341 CAT RNA-binding domain GO:0003723 GYO_4317 125c0dd92d5e29b74e7457d20916984a 277 Gene3D G3DSA:2.30.24.10 1 55 8.0E-25 T 14-10-2018 IPR036650 CAT RNA-binding domain superfamily GO:0003723 GYO_4317 125c0dd92d5e29b74e7457d20916984a 277 SUPERFAMILY SSF63520 57 166 4.05E-33 T 14-10-2018 IPR036634 PRD domain superfamily GO:0006355 GYO_4317 125c0dd92d5e29b74e7457d20916984a 277 Pfam PF00874 PRD domain 75 163 2.0E-25 T 14-10-2018 IPR011608 PRD domain GO:0006355 GYO_4317 125c0dd92d5e29b74e7457d20916984a 277 Pfam PF00874 PRD domain 180 272 8.9E-21 T 14-10-2018 IPR011608 PRD domain GO:0006355 GYO_3834 b78bac7b5c9ca91e041b41a79f336abe 216 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 73 184 5.6E-10 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 GYO_3834 b78bac7b5c9ca91e041b41a79f336abe 216 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 85 178 3.9E-11 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 GYO_3834 b78bac7b5c9ca91e041b41a79f336abe 216 Gene3D G3DSA:3.40.50.1000 9 188 6.7E-50 T 14-10-2018 IPR023214 HAD superfamily GYO_3834 b78bac7b5c9ca91e041b41a79f336abe 216 Hamap MF_01250 Pyrophosphatase PpaX [ppaX]. 4 216 45.938 T 14-10-2018 IPR023733 Pyrophosphatase PpaX GO:0016462 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 GYO_3834 b78bac7b5c9ca91e041b41a79f336abe 216 Pfam PF13419 Haloacid dehalogenase-like hydrolase 9 184 5.6E-54 T 14-10-2018 GYO_3834 b78bac7b5c9ca91e041b41a79f336abe 216 Gene3D G3DSA:1.10.150.240 21 83 6.7E-50 T 14-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 GYO_3834 b78bac7b5c9ca91e041b41a79f336abe 216 SUPERFAMILY SSF56784 5 213 8.91E-58 T 14-10-2018 IPR036412 HAD-like superfamily GYO_0092 0e3005109485c44e46bc23d2dba033e4 120 TIGRFAM TIGR00526 folB_dom: FolB domain 1 119 4.9E-43 T 14-10-2018 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 GYO_0092 0e3005109485c44e46bc23d2dba033e4 120 TIGRFAM TIGR00525 folB: dihydroneopterin aldolase 2 117 5.1E-48 T 14-10-2018 IPR006156 Dihydroneopterin aldolase GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 GYO_0092 0e3005109485c44e46bc23d2dba033e4 120 SUPERFAMILY SSF55620 2 119 1.61E-41 T 14-10-2018 GYO_0092 0e3005109485c44e46bc23d2dba033e4 120 Gene3D G3DSA:3.30.1130.10 1 120 1.1E-48 T 14-10-2018 GYO_0092 0e3005109485c44e46bc23d2dba033e4 120 SMART SM00905 4 117 1.8E-53 T 14-10-2018 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 GYO_0092 0e3005109485c44e46bc23d2dba033e4 120 Pfam PF02152 Dihydroneopterin aldolase 4 116 4.2E-37 T 14-10-2018 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 GYO_1186 40c2fd1e9b883806a6513ea00b6e7561 631 Pfam PF08298 PrkA AAA domain 22 371 5.7E-160 T 14-10-2018 IPR013153 PrkA AAA domain GYO_1186 40c2fd1e9b883806a6513ea00b6e7561 631 SMART SM00763 21 371 1.7E-199 T 14-10-2018 IPR013153 PrkA AAA domain GYO_1186 40c2fd1e9b883806a6513ea00b6e7561 631 PIRSF PIRSF000549 1 631 6.9E-271 T 14-10-2018 IPR016230 Serine-protein kinase, PrkA GO:0004672 GYO_1186 40c2fd1e9b883806a6513ea00b6e7561 631 SUPERFAMILY SSF52540 68 460 1.84E-10 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase GYO_1186 40c2fd1e9b883806a6513ea00b6e7561 631 Pfam PF06798 PrkA serine protein kinase C-terminal domain 375 624 2.5E-93 T 14-10-2018 IPR010650 PrkA C-terminal domain GYO_2307 89da67418dd4ff9c6b1510b46ba518a4 233 Pfam PF00753 Metallo-beta-lactamase superfamily 19 212 1.1E-25 T 14-10-2018 IPR001279 Metallo-beta-lactamase GYO_2307 89da67418dd4ff9c6b1510b46ba518a4 233 Gene3D G3DSA:3.60.15.10 3 233 5.2E-38 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like GYO_2307 89da67418dd4ff9c6b1510b46ba518a4 233 SUPERFAMILY SSF56281 10 228 1.44E-41 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like GYO_2307 89da67418dd4ff9c6b1510b46ba518a4 233 SMART SM00849 20 212 4.9E-31 T 14-10-2018 IPR001279 Metallo-beta-lactamase GYO_0134 e0638d9920089cfb2e3b8a72b5444aa2 1193 Pfam PF04561 RNA polymerase Rpb2, domain 2 371 410 7.7E-7 T 14-10-2018 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 GYO_0134 e0638d9920089cfb2e3b8a72b5444aa2 1193 Pfam PF04561 RNA polymerase Rpb2, domain 2 140 290 2.1E-27 T 14-10-2018 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 GYO_0134 e0638d9920089cfb2e3b8a72b5444aa2 1193 Pfam PF00562 RNA polymerase Rpb2, domain 6 676 1069 1.2E-164 T 14-10-2018 IPR007120 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 GYO_0134 e0638d9920089cfb2e3b8a72b5444aa2 1193 Gene3D G3DSA:3.90.1110.10 154 269 6.3E-8 T 14-10-2018 IPR037034 RNA polymerase Rpb2, domain 2 superfamily GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 GYO_0134 e0638d9920089cfb2e3b8a72b5444aa2 1193 Hamap MF_01321 DNA-directed RNA polymerase subunit beta [rpoB]. 15 1147 12.6 T 14-10-2018 IPR010243 DNA-directed RNA polymerase beta subunit, bacterial-type GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 GYO_0134 e0638d9920089cfb2e3b8a72b5444aa2 1193 Pfam PF10385 RNA polymerase beta subunit external 1 domain 547 614 1.3E-25 T 14-10-2018 IPR019462 DNA-directed RNA polymerase, beta subunit, external 1 domain GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 GYO_0134 e0638d9920089cfb2e3b8a72b5444aa2 1193 Pfam PF04565 RNA polymerase Rpb2, domain 3 469 537 1.7E-30 T 14-10-2018 IPR007645 RNA polymerase Rpb2, domain 3 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 GYO_0134 e0638d9920089cfb2e3b8a72b5444aa2 1193 SUPERFAMILY SSF64484 13 1157 0.0 T 14-10-2018 GYO_0134 e0638d9920089cfb2e3b8a72b5444aa2 1193 Gene3D G3DSA:2.40.50.150 791 930 5.2E-61 T 14-10-2018 IPR014724 RNA polymerase Rpb2, OB-fold GO:0003899 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 GYO_0134 e0638d9920089cfb2e3b8a72b5444aa2 1193 TIGRFAM TIGR02013 rpoB: DNA-directed RNA polymerase, beta subunit 204 896 0.0 T 14-10-2018 IPR010243 DNA-directed RNA polymerase beta subunit, bacterial-type GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 GYO_0134 e0638d9920089cfb2e3b8a72b5444aa2 1193 Gene3D G3DSA:3.90.1100.10 389 592 1.8E-74 T 14-10-2018 GYO_0134 e0638d9920089cfb2e3b8a72b5444aa2 1193 ProSitePatterns PS01166 RNA polymerases beta chain signature. 922 934 - T 14-10-2018 IPR007121 RNA polymerase, beta subunit, conserved site GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 GYO_0134 e0638d9920089cfb2e3b8a72b5444aa2 1193 Pfam PF04560 RNA polymerase Rpb2, domain 7 1071 1145 4.7E-27 T 14-10-2018 IPR007641 RNA polymerase Rpb2, domain 7 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 GYO_0134 e0638d9920089cfb2e3b8a72b5444aa2 1193 Gene3D G3DSA:2.40.270.10 752 790 4.3E-6 T 14-10-2018 IPR037033 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain superfamily GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 GYO_0134 e0638d9920089cfb2e3b8a72b5444aa2 1193 Gene3D G3DSA:3.90.1800.10 1057 1110 1.1E-10 T 14-10-2018 GYO_0134 e0638d9920089cfb2e3b8a72b5444aa2 1193 Pfam PF04563 RNA polymerase beta subunit 28 454 3.1E-30 T 14-10-2018 IPR007644 RNA polymerase, beta subunit, protrusion GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 GYO_0134 e0638d9920089cfb2e3b8a72b5444aa2 1193 Gene3D G3DSA:3.90.1100.10 20 153 2.2E-53 T 14-10-2018 GYO_0134 e0638d9920089cfb2e3b8a72b5444aa2 1193 Gene3D G3DSA:3.90.1100.10 601 671 7.2E-19 T 14-10-2018 GYO_0134 e0638d9920089cfb2e3b8a72b5444aa2 1193 Gene3D G3DSA:2.40.270.10 981 1047 4.7E-25 T 14-10-2018 IPR037033 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain superfamily GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 GYO_0134 e0638d9920089cfb2e3b8a72b5444aa2 1193 Gene3D G3DSA:2.40.50.100 672 751 2.8E-27 T 14-10-2018 GYO_2732 75f74b538b95d2f0f95b804048df6747 143 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 10 30 5.5E-4 T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site GYO_2732 75f74b538b95d2f0f95b804048df6747 143 PRINTS PR00885 Bacterial general secretion pathway protein H signature 6 20 3.1E-5 T 14-10-2018 IPR002416 Type II secretion system protein H GO:0008565|GO:0015627|GO:0015628 GYO_2732 75f74b538b95d2f0f95b804048df6747 143 PRINTS PR00885 Bacterial general secretion pathway protein H signature 21 35 3.1E-5 T 14-10-2018 IPR002416 Type II secretion system protein H GO:0008565|GO:0015627|GO:0015628 GYO_2732 75f74b538b95d2f0f95b804048df6747 143 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 9 29 - T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site GYO_2732 75f74b538b95d2f0f95b804048df6747 143 PIRSF PIRSF021292 5 143 8.7E-45 T 14-10-2018 IPR016785 ComG operon protein 4 GO:0030420 GYO_2732 75f74b538b95d2f0f95b804048df6747 143 SUPERFAMILY SSF54523 11 81 2.04E-6 T 14-10-2018 GYO_3733 ced9762311361cde088dddf8e242fdeb 479 TIGRFAM TIGR00273 TIGR00273: iron-sulfur cluster-binding protein 18 455 1.6E-228 T 14-10-2018 IPR004452 4Fe-4S binding protein GO:0019516 GYO_3733 ced9762311361cde088dddf8e242fdeb 479 Pfam PF13183 4Fe-4S dicluster domain 311 377 1.3E-9 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain GYO_3733 ced9762311361cde088dddf8e242fdeb 479 Pfam PF02589 LUD domain 71 295 7.2E-57 T 14-10-2018 IPR003741 LUD domain GYO_3733 ced9762311361cde088dddf8e242fdeb 479 Pfam PF11870 Domain of unknown function (DUF3390) 385 470 1.6E-19 T 14-10-2018 IPR024569 4Fe-4S binding protein, C-terminal GYO_3733 ced9762311361cde088dddf8e242fdeb 479 Hamap MF_02103 Lactate utilization protein B [lutB]. 1 475 69.38 T 14-10-2018 IPR022825 Lactate utilization protein B GYO_3733 ced9762311361cde088dddf8e242fdeb 479 Gene3D G3DSA:3.40.50.10420 121 295 4.6E-16 T 14-10-2018 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain superfamily GYO_3733 ced9762311361cde088dddf8e242fdeb 479 SUPERFAMILY SSF46548 271 392 3.49E-16 T 14-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 GYO_3733 ced9762311361cde088dddf8e242fdeb 479 SUPERFAMILY SSF100950 64 296 1.38E-39 T 14-10-2018 IPR037171 NagB/RpiA transferase-like GYO_3733 ced9762311361cde088dddf8e242fdeb 479 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 313 324 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site GYO_1847 85fb2852cf6df387cff1d4f220ef05e7 161 Gene3D G3DSA:3.40.50.620 1 161 8.5E-57 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold GYO_1847 85fb2852cf6df387cff1d4f220ef05e7 161 TIGRFAM TIGR01510 coaD_prev_kdtB: pantetheine-phosphate adenylyltransferase 4 158 6.0E-61 T 14-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 GYO_1847 85fb2852cf6df387cff1d4f220ef05e7 161 Pfam PF01467 Cytidylyltransferase-like 7 134 8.7E-20 T 14-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 GYO_1847 85fb2852cf6df387cff1d4f220ef05e7 161 SUPERFAMILY SSF52374 4 157 1.32E-41 T 14-10-2018 GYO_1847 85fb2852cf6df387cff1d4f220ef05e7 161 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 4 64 1.2E-18 T 14-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 GYO_1847 85fb2852cf6df387cff1d4f220ef05e7 161 Hamap MF_00151 Phosphopantetheine adenylyltransferase [coaD]. 3 159 35.385 T 14-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 GYO_1847 85fb2852cf6df387cff1d4f220ef05e7 161 ProDom PD016147 LIGASE LYASE CITRATE PRO-3S-LYASE SYNTHETASE TRANSFERASE CYTIDYLTRANSFERASE-RELATED:CITRATE ACETATE:SH-CITRATE CITC PLASMID 12 78 0.002 T 14-10-2018 GYO_1847 85fb2852cf6df387cff1d4f220ef05e7 161 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 3 21 4.3E-52 T 14-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 GYO_1847 85fb2852cf6df387cff1d4f220ef05e7 161 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 86 102 4.3E-52 T 14-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 GYO_1847 85fb2852cf6df387cff1d4f220ef05e7 161 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 113 135 4.3E-52 T 14-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 GYO_1847 85fb2852cf6df387cff1d4f220ef05e7 161 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 21 42 4.3E-52 T 14-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 GYO_1847 85fb2852cf6df387cff1d4f220ef05e7 161 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 50 74 4.3E-52 T 14-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 GYO_0189 62ebf49e54b1289a0e086f0db0abba4f 394 Gene3D G3DSA:1.10.443.10 175 390 2.7E-41 T 14-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 GYO_0189 62ebf49e54b1289a0e086f0db0abba4f 394 Pfam PF00589 Phage integrase family 182 374 7.5E-23 T 14-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 GYO_0189 62ebf49e54b1289a0e086f0db0abba4f 394 Pfam PF14659 Phage integrase, N-terminal SAM-like domain 72 128 7.5E-11 T 14-10-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 GYO_0189 62ebf49e54b1289a0e086f0db0abba4f 394 Gene3D G3DSA:1.10.150.130 65 174 6.7E-24 T 14-10-2018 IPR010998 Integrase/recombinase, N-terminal GYO_0189 62ebf49e54b1289a0e086f0db0abba4f 394 SUPERFAMILY SSF56349 72 376 1.56E-56 T 14-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 GYO_0268 62ebf49e54b1289a0e086f0db0abba4f 394 Gene3D G3DSA:1.10.443.10 175 390 2.7E-41 T 14-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 GYO_0268 62ebf49e54b1289a0e086f0db0abba4f 394 Pfam PF00589 Phage integrase family 182 374 7.5E-23 T 14-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 GYO_0268 62ebf49e54b1289a0e086f0db0abba4f 394 Pfam PF14659 Phage integrase, N-terminal SAM-like domain 72 128 7.5E-11 T 14-10-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 GYO_0268 62ebf49e54b1289a0e086f0db0abba4f 394 Gene3D G3DSA:1.10.150.130 65 174 6.7E-24 T 14-10-2018 IPR010998 Integrase/recombinase, N-terminal GYO_0268 62ebf49e54b1289a0e086f0db0abba4f 394 SUPERFAMILY SSF56349 72 376 1.56E-56 T 14-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 GYO_3014 3a705b73ef8c5a5d46a9d7fae953beed 334 Pfam PF05491 Holliday junction DNA helicase ruvB C-terminus 254 327 1.1E-33 T 14-10-2018 IPR008823 DNA helicase, Holliday junction RuvB type, C-terminal GO:0003677|GO:0006281|GO:0006310|GO:0009378 GYO_3014 3a705b73ef8c5a5d46a9d7fae953beed 334 Gene3D G3DSA:1.10.8.60 183 257 3.6E-31 T 14-10-2018 GYO_3014 3a705b73ef8c5a5d46a9d7fae953beed 334 TIGRFAM TIGR00635 ruvB: Holliday junction DNA helicase RuvB 24 328 1.9E-153 T 14-10-2018 IPR004605 DNA helicase, Holliday junction RuvB type GO:0003677|GO:0005524|GO:0006281|GO:0006310|GO:0009378 GYO_3014 3a705b73ef8c5a5d46a9d7fae953beed 334 SMART SM00382 52 183 5.1E-11 T 14-10-2018 IPR003593 AAA+ ATPase domain GYO_3014 3a705b73ef8c5a5d46a9d7fae953beed 334 Hamap MF_00016 Holliday junction ATP-dependent DNA helicase RuvB [ruvB]. 1 334 173.898 T 14-10-2018 IPR004605 DNA helicase, Holliday junction RuvB type GO:0003677|GO:0005524|GO:0006281|GO:0006310|GO:0009378 GYO_3014 3a705b73ef8c5a5d46a9d7fae953beed 334 Gene3D G3DSA:3.40.50.300 19 182 1.2E-40 T 14-10-2018 GYO_3014 3a705b73ef8c5a5d46a9d7fae953beed 334 SUPERFAMILY SSF46785 257 331 4.9E-25 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily GYO_3014 3a705b73ef8c5a5d46a9d7fae953beed 334 SUPERFAMILY SSF52540 21 255 8.47E-56 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase GYO_3014 3a705b73ef8c5a5d46a9d7fae953beed 334 Gene3D G3DSA:1.10.10.10 258 334 4.2E-32 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily GYO_3014 3a705b73ef8c5a5d46a9d7fae953beed 334 Pfam PF05496 Holliday junction DNA helicase ruvB N-terminus 5 235 2.8E-119 T 14-10-2018 IPR008824 Holliday junction DNA helicase ruvB, N-terminal GO:0006281|GO:0006310|GO:0009378 GYO_3014 3a705b73ef8c5a5d46a9d7fae953beed 334 ProDom PD005323 DNA HELICASE HOLLIDAY JUNCTION RUVB NUCLEOTIDE-BINDING ATP-BINDING SOS RECOMBINATION RESPONSE 252 325 1.0E-36 T 14-10-2018 IPR008823 DNA helicase, Holliday junction RuvB type, C-terminal GO:0003677|GO:0006281|GO:0006310|GO:0009378 GYO_0880 a14deb1c94b5015d7685103650bcfa2b 346 Pfam PF00107 Zinc-binding dehydrogenase 179 304 1.0E-26 T 14-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 GYO_0880 a14deb1c94b5015d7685103650bcfa2b 346 Gene3D G3DSA:3.90.180.10 9 325 1.7E-98 T 14-10-2018 GYO_0880 a14deb1c94b5015d7685103650bcfa2b 346 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 24 138 8.3E-27 T 14-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 GYO_0880 a14deb1c94b5015d7685103650bcfa2b 346 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 69 83 - T 14-10-2018 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 GYO_0880 a14deb1c94b5015d7685103650bcfa2b 346 Gene3D G3DSA:3.40.50.720 156 291 1.7E-98 T 14-10-2018 GYO_0880 a14deb1c94b5015d7685103650bcfa2b 346 SMART SM00829 8 343 1.0E-5 T 14-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 GYO_0880 a14deb1c94b5015d7685103650bcfa2b 346 SUPERFAMILY SSF50129 1 178 7.0E-48 T 14-10-2018 IPR011032 GroES-like superfamily GYO_0880 a14deb1c94b5015d7685103650bcfa2b 346 SUPERFAMILY SSF51735 143 309 3.11E-38 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily GYO_0832 e3ccd42b2b1564a5f8b94eb15cb1c9a5 462 Gene3D G3DSA:1.10.60.40 327 415 1.7E-146 T 14-10-2018 GYO_0832 e3ccd42b2b1564a5f8b94eb15cb1c9a5 462 Pfam PF00245 Alkaline phosphatase 43 454 2.7E-147 T 14-10-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 GYO_0832 e3ccd42b2b1564a5f8b94eb15cb1c9a5 462 SUPERFAMILY SSF53649 35 456 2.13E-129 T 14-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 GYO_0832 e3ccd42b2b1564a5f8b94eb15cb1c9a5 462 Gene3D G3DSA:3.40.720.10 47 446 1.7E-146 T 14-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 GYO_0832 e3ccd42b2b1564a5f8b94eb15cb1c9a5 462 ProSitePatterns PS00123 Alkaline phosphatase active site. 98 106 - T 14-10-2018 IPR018299 Alkaline phosphatase, active site GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 GYO_0832 e3ccd42b2b1564a5f8b94eb15cb1c9a5 462 PRINTS PR00113 Alkaline phosphatase signature 251 280 1.6E-44 T 14-10-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 GYO_0832 e3ccd42b2b1564a5f8b94eb15cb1c9a5 462 PRINTS PR00113 Alkaline phosphatase signature 43 63 1.6E-44 T 14-10-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 GYO_0832 e3ccd42b2b1564a5f8b94eb15cb1c9a5 462 PRINTS PR00113 Alkaline phosphatase signature 135 155 1.6E-44 T 14-10-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 GYO_0832 e3ccd42b2b1564a5f8b94eb15cb1c9a5 462 PRINTS PR00113 Alkaline phosphatase signature 185 195 1.6E-44 T 14-10-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 GYO_0832 e3ccd42b2b1564a5f8b94eb15cb1c9a5 462 PRINTS PR00113 Alkaline phosphatase signature 98 113 1.6E-44 T 14-10-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 GYO_0832 e3ccd42b2b1564a5f8b94eb15cb1c9a5 462 SMART SM00098 44 456 1.0E-244 T 14-10-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 GYO_1214 dfbc6ba89e81545278acb579e347c523 445 PIRSF PIRSF000521 8 445 2.1E-36 T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 GYO_1214 dfbc6ba89e81545278acb579e347c523 445 Gene3D G3DSA:3.90.1150.10 14 441 6.0E-151 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 GYO_1214 dfbc6ba89e81545278acb579e347c523 445 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 246 283 - T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 GYO_1214 dfbc6ba89e81545278acb579e347c523 445 SUPERFAMILY SSF53383 20 443 1.03E-124 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase GYO_1214 dfbc6ba89e81545278acb579e347c523 445 Pfam PF00202 Aminotransferase class-III 30 440 2.8E-108 T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 GYO_1214 dfbc6ba89e81545278acb579e347c523 445 Gene3D G3DSA:3.40.640.10 65 335 6.0E-151 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 GYO_3102 1de540046b60a88ede532fe378a19dbe 194 Pfam PF08359 YsiA-like protein, C-terminal region 58 190 1.3E-63 T 14-10-2018 IPR013570 Transcription regulator YsiA, C-terminal GYO_3102 1de540046b60a88ede532fe378a19dbe 194 Gene3D G3DSA:1.10.10.60 1 49 1.5E-24 T 14-10-2018 GYO_3102 1de540046b60a88ede532fe378a19dbe 194 Pfam PF00440 Bacterial regulatory proteins, tetR family 11 56 5.7E-18 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 GYO_3102 1de540046b60a88ede532fe378a19dbe 194 SUPERFAMILY SSF48498 78 193 1.57E-29 T 14-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily GYO_3102 1de540046b60a88ede532fe378a19dbe 194 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 11 24 1.2E-12 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 GYO_3102 1de540046b60a88ede532fe378a19dbe 194 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 32 55 1.2E-12 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 GYO_3102 1de540046b60a88ede532fe378a19dbe 194 SUPERFAMILY SSF46689 6 72 2.86E-17 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 GYO_3102 1de540046b60a88ede532fe378a19dbe 194 Gene3D G3DSA:1.10.357.10 50 194 6.7E-41 T 14-10-2018 GYO_2814 fbd02ec92b9b072e87908974f12793ea 375 Gene3D G3DSA:2.60.260.20 115 251 5.5E-37 T 14-10-2018 GYO_2814 fbd02ec92b9b072e87908974f12793ea 375 SUPERFAMILY SSF57938 132 213 7.72E-19 T 14-10-2018 IPR036410 Heat shock protein DnaJ, cysteine-rich domain superfamily GYO_2814 fbd02ec92b9b072e87908974f12793ea 375 Hamap MF_01152 Chaperone protein DnaJ [dnaJ]. 2 371 41.56 T 14-10-2018 IPR012724 Chaperone DnaJ GO:0005524|GO:0006457|GO:0009408|GO:0051082 GYO_2814 fbd02ec92b9b072e87908974f12793ea 375 Pfam PF00684 DnaJ central domain 145 209 3.6E-14 T 14-10-2018 IPR001305 Heat shock protein DnaJ, cysteine-rich domain GO:0031072|GO:0051082 GYO_2814 fbd02ec92b9b072e87908974f12793ea 375 SUPERFAMILY SSF49493 112 259 4.84E-20 T 14-10-2018 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 GYO_2814 fbd02ec92b9b072e87908974f12793ea 375 SUPERFAMILY SSF46565 1 101 4.06E-37 T 14-10-2018 IPR036869 Chaperone J-domain superfamily GYO_2814 fbd02ec92b9b072e87908974f12793ea 375 Gene3D G3DSA:2.10.230.10 145 209 5.5E-37 T 14-10-2018 GYO_2814 fbd02ec92b9b072e87908974f12793ea 375 PRINTS PR00625 DnaJ domain signature 25 40 8.7E-31 T 14-10-2018 IPR001623 DnaJ domain GYO_2814 fbd02ec92b9b072e87908974f12793ea 375 PRINTS PR00625 DnaJ domain signature 61 80 8.7E-31 T 14-10-2018 IPR001623 DnaJ domain GYO_2814 fbd02ec92b9b072e87908974f12793ea 375 PRINTS PR00625 DnaJ domain signature 41 61 8.7E-31 T 14-10-2018 IPR001623 DnaJ domain GYO_2814 fbd02ec92b9b072e87908974f12793ea 375 PRINTS PR00625 DnaJ domain signature 7 25 8.7E-31 T 14-10-2018 IPR001623 DnaJ domain GYO_2814 fbd02ec92b9b072e87908974f12793ea 375 SUPERFAMILY SSF49493 260 346 4.06E-26 T 14-10-2018 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 GYO_2814 fbd02ec92b9b072e87908974f12793ea 375 Pfam PF00226 DnaJ domain 5 66 2.6E-26 T 14-10-2018 IPR001623 DnaJ domain GYO_2814 fbd02ec92b9b072e87908974f12793ea 375 SMART SM00271 4 61 2.3E-29 T 14-10-2018 IPR001623 DnaJ domain GYO_2814 fbd02ec92b9b072e87908974f12793ea 375 ProSitePatterns PS00636 Nt-dnaJ domain signature. 46 65 - T 14-10-2018 IPR018253 DnaJ domain, conserved site GYO_2814 fbd02ec92b9b072e87908974f12793ea 375 Gene3D G3DSA:1.10.287.110 1 110 1.3E-38 T 14-10-2018 IPR036869 Chaperone J-domain superfamily GYO_2814 fbd02ec92b9b072e87908974f12793ea 375 Gene3D G3DSA:2.60.260.20 255 335 4.9E-31 T 14-10-2018 GYO_2814 fbd02ec92b9b072e87908974f12793ea 375 Pfam PF01556 DnaJ C terminal domain 118 335 1.9E-44 T 14-10-2018 IPR002939 Chaperone DnaJ, C-terminal GYO_2814 fbd02ec92b9b072e87908974f12793ea 375 TIGRFAM TIGR02349 DnaJ_bact: chaperone protein DnaJ 5 351 3.5E-140 T 14-10-2018 IPR012724 Chaperone DnaJ GO:0005524|GO:0006457|GO:0009408|GO:0051082 GYO_1258 235aca329aeaaee5af797985dfbd3898 282 Gene3D G3DSA:3.20.10.10 118 280 1.5E-57 T 14-10-2018 GYO_1258 235aca329aeaaee5af797985dfbd3898 282 SUPERFAMILY SSF56752 1 273 1.57E-78 T 14-10-2018 IPR036038 Aminotransferase-like, PLP-dependent enzymes GO:0003824 Reactome: R-HSA-70895 GYO_1258 235aca329aeaaee5af797985dfbd3898 282 Gene3D G3DSA:3.30.470.10 1 116 9.5E-34 T 14-10-2018 GYO_1258 235aca329aeaaee5af797985dfbd3898 282 Pfam PF01063 Amino-transferase class IV 29 248 6.9E-45 T 14-10-2018 IPR001544 Aminotransferase class IV GO:0003824 Reactome: R-HSA-70895 GYO_1258 235aca329aeaaee5af797985dfbd3898 282 TIGRFAM TIGR01121 D_amino_aminoT: D-amino-acid transaminase 2 276 5.0E-139 T 14-10-2018 IPR005784 D-amino acid aminotransferase GO:0008483|GO:0030170|GO:0046416 KEGG: 00310+2.6.1.21|KEGG: 00330+2.6.1.21|KEGG: 00360+2.6.1.21|KEGG: 00472+2.6.1.21|KEGG: 00473+2.6.1.21 GYO_1258 235aca329aeaaee5af797985dfbd3898 282 ProSitePatterns PS00770 Aminotransferases class-IV signature. 176 205 - T 14-10-2018 IPR018300 Aminotransferase, class IV, conserved site GO:0003824 Reactome: R-HSA-70895 GYO_3309 b9eb1a516dfb8f2d7ae2c5d374bb4817 80 Pfam PF10763 Protein of unknown function (DUF2584) 1 80 1.3E-36 T 14-10-2018 IPR019699 Protein of unknown function DUF2584 GYO_3309 b9eb1a516dfb8f2d7ae2c5d374bb4817 80 Gene3D G3DSA:2.40.240.20 1 77 1.7E-37 T 14-10-2018 GYO_3309 b9eb1a516dfb8f2d7ae2c5d374bb4817 80 SUPERFAMILY SSF88697 1 80 2.19E-30 T 14-10-2018 IPR015947 PUA-like superfamily GYO_4388 b732aaa6676d56be561bf29f6e3a2721 461 Pfam PF00083 Sugar (and other) transporter 13 439 3.6E-122 T 14-10-2018 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 GYO_4388 b732aaa6676d56be561bf29f6e3a2721 461 ProSitePatterns PS00216 Sugar transport proteins signature 1. 297 314 - T 14-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 GYO_4388 b732aaa6676d56be561bf29f6e3a2721 461 TIGRFAM TIGR00879 SP: MFS transporter, sugar porter (SP) family 7 437 6.8E-119 T 14-10-2018 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022857|GO:0055085 Reactome: R-HSA-189200 GYO_4388 b732aaa6676d56be561bf29f6e3a2721 461 PRINTS PR00171 Sugar transporter signature 365 377 2.8E-27 T 14-10-2018 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022857|GO:0055085 Reactome: R-HSA-189200 GYO_4388 b732aaa6676d56be561bf29f6e3a2721 461 PRINTS PR00171 Sugar transporter signature 253 263 2.8E-27 T 14-10-2018 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022857|GO:0055085 Reactome: R-HSA-189200 GYO_4388 b732aaa6676d56be561bf29f6e3a2721 461 PRINTS PR00171 Sugar transporter signature 18 28 2.8E-27 T 14-10-2018 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022857|GO:0055085 Reactome: R-HSA-189200 GYO_4388 b732aaa6676d56be561bf29f6e3a2721 461 PRINTS PR00171 Sugar transporter signature 342 363 2.8E-27 T 14-10-2018 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022857|GO:0055085 Reactome: R-HSA-189200 GYO_4388 b732aaa6676d56be561bf29f6e3a2721 461 PRINTS PR00171 Sugar transporter signature 101 120 2.8E-27 T 14-10-2018 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022857|GO:0055085 Reactome: R-HSA-189200 GYO_4388 b732aaa6676d56be561bf29f6e3a2721 461 ProSitePatterns PS00217 Sugar transport proteins signature 2. 106 131 - T 14-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 GYO_4388 b732aaa6676d56be561bf29f6e3a2721 461 ProSitePatterns PS00216 Sugar transport proteins signature 1. 64 81 - T 14-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 GYO_4388 b732aaa6676d56be561bf29f6e3a2721 461 Gene3D G3DSA:1.20.1250.20 2 445 4.9E-138 T 14-10-2018 GYO_4388 b732aaa6676d56be561bf29f6e3a2721 461 SUPERFAMILY SSF103473 4 438 1.1E-84 T 14-10-2018 IPR036259 MFS transporter superfamily GYO_1232 e14ff2cd832f0eb41741ac4287d429b3 366 SUPERFAMILY SSF48256 2 364 1.96E-118 T 14-10-2018 IPR036969 Citrate synthase superfamily GO:0046912 GYO_1232 e14ff2cd832f0eb41741ac4287d429b3 366 PRINTS PR00143 Citrate synthase signature 242 262 8.3E-33 T 14-10-2018 IPR002020 Citrate synthase GO:0046912 GYO_1232 e14ff2cd832f0eb41741ac4287d429b3 366 PRINTS PR00143 Citrate synthase signature 323 337 8.3E-33 T 14-10-2018 IPR002020 Citrate synthase GO:0046912 GYO_1232 e14ff2cd832f0eb41741ac4287d429b3 366 PRINTS PR00143 Citrate synthase signature 167 182 8.3E-33 T 14-10-2018 IPR002020 Citrate synthase GO:0046912 GYO_1232 e14ff2cd832f0eb41741ac4287d429b3 366 PRINTS PR00143 Citrate synthase signature 303 319 8.3E-33 T 14-10-2018 IPR002020 Citrate synthase GO:0046912 GYO_1232 e14ff2cd832f0eb41741ac4287d429b3 366 PRINTS PR00143 Citrate synthase signature 118 131 8.3E-33 T 14-10-2018 IPR002020 Citrate synthase GO:0046912 GYO_1232 e14ff2cd832f0eb41741ac4287d429b3 366 PRINTS PR00143 Citrate synthase signature 189 217 8.3E-33 T 14-10-2018 IPR002020 Citrate synthase GO:0046912 GYO_1232 e14ff2cd832f0eb41741ac4287d429b3 366 Gene3D G3DSA:1.10.580.10 15 343 1.4E-134 T 14-10-2018 IPR016142 Citrate synthase-like, large alpha subdomain Reactome: R-HSA-1268020|Reactome: R-HSA-71403 GYO_1232 e14ff2cd832f0eb41741ac4287d429b3 366 ProSitePatterns PS00480 Citrate synthase signature. 249 261 - T 14-10-2018 IPR019810 Citrate synthase active site GO:0006099|GO:0046912 Reactome: R-HSA-1268020|Reactome: R-HSA-71403 GYO_1232 e14ff2cd832f0eb41741ac4287d429b3 366 PIRSF PIRSF001369 1 366 1.2E-140 T 14-10-2018 IPR024176 Citrate synthase, bacterial-type GYO_1232 e14ff2cd832f0eb41741ac4287d429b3 366 Gene3D G3DSA:1.10.230.10 215 317 1.4E-134 T 14-10-2018 IPR016143 Citrate synthase-like, small alpha subdomain GYO_1232 e14ff2cd832f0eb41741ac4287d429b3 366 Pfam PF00285 Citrate synthase, C-terminal domain 5 352 2.0E-113 T 14-10-2018 IPR002020 Citrate synthase GO:0046912 GYO_3201 7770b8e01bd52b47d9af3ea86858be47 528 Gene3D G3DSA:2.30.40.10 8 503 7.0E-137 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 GYO_3201 7770b8e01bd52b47d9af3ea86858be47 528 Gene3D G3DSA:3.20.20.140 61 485 7.0E-137 T 14-10-2018 GYO_3201 7770b8e01bd52b47d9af3ea86858be47 528 Gene3D G3DSA:3.10.310.70 79 196 7.0E-137 T 14-10-2018 GYO_3201 7770b8e01bd52b47d9af3ea86858be47 528 SUPERFAMILY SSF51338 3 527 1.48E-15 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 GYO_3201 7770b8e01bd52b47d9af3ea86858be47 528 SUPERFAMILY SSF51556 60 478 2.15E-31 T 14-10-2018 IPR032466 Metal-dependent hydrolase GYO_3201 7770b8e01bd52b47d9af3ea86858be47 528 Pfam PF07969 Amidohydrolase family 49 526 1.9E-133 T 14-10-2018 IPR013108 Amidohydrolase 3 GYO_0926 02d8adf0bbc5e6f58445bb639e41ab80 333 Pfam PF01636 Phosphotransferase enzyme family 30 255 1.3E-25 T 14-10-2018 IPR002575 Aminoglycoside phosphotransferase GYO_0926 02d8adf0bbc5e6f58445bb639e41ab80 333 Gene3D G3DSA:3.90.1200.10 117 315 1.2E-20 T 14-10-2018 GYO_0926 02d8adf0bbc5e6f58445bb639e41ab80 333 SUPERFAMILY SSF56112 14 308 1.46E-54 T 14-10-2018 IPR011009 Protein kinase-like domain superfamily GYO_2231 302f9b1f7747ea589ddfff608791bf83 183 Pfam PF12802 MarR family 38 97 9.8E-12 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 GYO_2231 302f9b1f7747ea589ddfff608791bf83 183 SUPERFAMILY SSF46785 11 148 3.2E-26 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily GYO_2231 302f9b1f7747ea589ddfff608791bf83 183 Gene3D G3DSA:1.10.10.10 1 183 2.6E-51 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily GYO_2231 302f9b1f7747ea589ddfff608791bf83 183 SMART SM00347 26 133 2.3E-11 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 GYO_2231 302f9b1f7747ea589ddfff608791bf83 183 PRINTS PR00598 Bacterial regulatory protein MarR family signature 74 89 1.5E-13 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 GYO_2231 302f9b1f7747ea589ddfff608791bf83 183 PRINTS PR00598 Bacterial regulatory protein MarR family signature 123 143 1.5E-13 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 GYO_2231 302f9b1f7747ea589ddfff608791bf83 183 PRINTS PR00598 Bacterial regulatory protein MarR family signature 93 109 1.5E-13 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 GYO_2231 302f9b1f7747ea589ddfff608791bf83 183 PRINTS PR00598 Bacterial regulatory protein MarR family signature 57 73 1.5E-13 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 GYO_2886 b79e528c401630e0e8d4e41be121da82 617 Gene3D G3DSA:3.30.1360.60 1 75 3.0E-23 T 14-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 GYO_2886 b79e528c401630e0e8d4e41be121da82 617 Pfam PF02378 Phosphotransferase system, EIIC 105 374 1.7E-21 T 14-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 GYO_2886 b79e528c401630e0e8d4e41be121da82 617 Pfam PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 468 593 2.3E-48 T 14-10-2018 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 GYO_2886 b79e528c401630e0e8d4e41be121da82 617 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 19 36 - T 14-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 GYO_2886 b79e528c401630e0e8d4e41be121da82 617 TIGRFAM TIGR00830 PTBA: PTS system, glucose subfamily, IIA component 469 589 1.3E-41 T 14-10-2018 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 GYO_2886 b79e528c401630e0e8d4e41be121da82 617 Pfam PF00367 phosphotransferase system, EIIB 9 41 6.8E-14 T 14-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 GYO_2886 b79e528c401630e0e8d4e41be121da82 617 TIGRFAM TIGR01995 PTS-II-ABC-beta: PTS system, beta-glucoside-specific IIABC component 3 611 1.3E-205 T 14-10-2018 IPR011297 Phosphotransferase system, beta-glucoside-specific IIABC component GO:0005886|GO:0008982|GO:0009401 GYO_2886 b79e528c401630e0e8d4e41be121da82 617 ProSitePatterns PS00371 PTS EIIA domains phosphorylation site signature 1. 531 543 - T 14-10-2018 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 GYO_2886 b79e528c401630e0e8d4e41be121da82 617 SUPERFAMILY SSF55604 6 78 9.55E-19 T 14-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 GYO_2886 b79e528c401630e0e8d4e41be121da82 617 SUPERFAMILY SSF51261 459 612 2.62E-51 T 14-10-2018 IPR011055 Duplicated hybrid motif GYO_2886 b79e528c401630e0e8d4e41be121da82 617 Gene3D G3DSA:2.70.70.10 457 612 4.3E-53 T 14-10-2018 IPR011055 Duplicated hybrid motif GYO_3990 3dd79562ffa5496b2b8e82f53822be70 922 SMART SM00487 446 636 2.1E-28 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain GYO_3990 3dd79562ffa5496b2b8e82f53822be70 922 SUPERFAMILY SSF52540 669 919 7.8E-61 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase GYO_3990 3dd79562ffa5496b2b8e82f53822be70 922 SUPERFAMILY SSF52540 429 664 7.75E-56 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase GYO_3990 3dd79562ffa5496b2b8e82f53822be70 922 Pfam PF00176 SNF2 family N-terminal domain 463 734 2.5E-55 T 14-10-2018 IPR000330 SNF2-related, N-terminal domain GO:0005524 GYO_3990 3dd79562ffa5496b2b8e82f53822be70 922 Gene3D G3DSA:1.20.120.850 688 911 9.2E-85 T 14-10-2018 GYO_3990 3dd79562ffa5496b2b8e82f53822be70 922 Gene3D G3DSA:3.40.50.300 674 876 9.2E-85 T 14-10-2018 GYO_3990 3dd79562ffa5496b2b8e82f53822be70 922 SMART SM00490 779 862 1.6E-21 T 14-10-2018 IPR001650 Helicase, C-terminal GYO_3990 3dd79562ffa5496b2b8e82f53822be70 922 Pfam PF00271 Helicase conserved C-terminal domain 750 862 8.1E-21 T 14-10-2018 IPR001650 Helicase, C-terminal GYO_3990 3dd79562ffa5496b2b8e82f53822be70 922 Gene3D G3DSA:3.40.50.10810 451 665 9.7E-66 T 14-10-2018 IPR038718 SNF2-like, N-terminal domain superfamily GYO_3990 3dd79562ffa5496b2b8e82f53822be70 922 Pfam PF12419 SNF2 Helicase protein 267 392 2.3E-35 T 14-10-2018 IPR022138 Helicase SWF/SNF-related GYO_3887 6d5fc5797036ba82577ac0d279fbc1b4 88 Pfam PF04316 Anti-sigma-28 factor, FlgM 32 83 1.8E-17 T 14-10-2018 IPR031316 Anti-sigma-28 factor FlgM, C-terminal GYO_3887 6d5fc5797036ba82577ac0d279fbc1b4 88 SUPERFAMILY SSF101498 1 85 2.22E-21 T 14-10-2018 IPR035890 Anti-sigma-28 factor FlgM superfamily GYO_3887 6d5fc5797036ba82577ac0d279fbc1b4 88 TIGRFAM TIGR03824 FlgM_jcvi: flagellar biosynthesis anti-sigma factor FlgM 1 86 3.9E-20 T 14-10-2018 IPR007412 Anti-sigma-28 factor, FlgM GO:0045892 GYO_3493 54461b7e00d39e7486e8d9c82c4f8da1 292 Gene3D G3DSA:3.40.50.1820 17 284 5.1E-75 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold GYO_3493 54461b7e00d39e7486e8d9c82c4f8da1 292 Pfam PF00756 Putative esterase 36 245 2.0E-17 T 14-10-2018 IPR000801 Putative esterase Reactome: R-HSA-156590 GYO_3493 54461b7e00d39e7486e8d9c82c4f8da1 292 SUPERFAMILY SSF53474 18 281 3.0E-58 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold GYO_2235 62732eb67400540bb4de673d1e98c5ca 680 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 12 63 1.1E-16 T 14-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 GYO_2235 62732eb67400540bb4de673d1e98c5ca 680 Gene3D G3DSA:3.40.50.740 78 478 7.4E-154 T 14-10-2018 GYO_2235 62732eb67400540bb4de673d1e98c5ca 680 Gene3D G3DSA:2.20.25.90 3 69 4.9E-15 T 14-10-2018 GYO_2235 62732eb67400540bb4de673d1e98c5ca 680 Pfam PF01568 Molydopterin dinucleotide binding domain 566 670 5.6E-18 T 14-10-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0043546|GO:0055114 GYO_2235 62732eb67400540bb4de673d1e98c5ca 680 Gene3D G3DSA:3.30.2070.10 433 522 7.4E-154 T 14-10-2018 GYO_2235 62732eb67400540bb4de673d1e98c5ca 680 Gene3D G3DSA:2.40.40.20 547 680 1.6E-25 T 14-10-2018 GYO_2235 62732eb67400540bb4de673d1e98c5ca 680 Pfam PF00384 Molybdopterin oxidoreductase 67 473 1.6E-59 T 14-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 GYO_2235 62732eb67400540bb4de673d1e98c5ca 680 Gene3D G3DSA:3.40.228.10 145 544 7.4E-154 T 14-10-2018 GYO_2235 62732eb67400540bb4de673d1e98c5ca 680 SUPERFAMILY SSF53706 12 565 3.53E-159 T 14-10-2018 GYO_2235 62732eb67400540bb4de673d1e98c5ca 680 SUPERFAMILY SSF50692 528 680 1.45E-30 T 14-10-2018 IPR009010 Aspartate decarboxylase-like domain superfamily GYO_2235 62732eb67400540bb4de673d1e98c5ca 680 ProSitePatterns PS00490 Prokaryotic molybdopterin oxidoreductases signature 2. 418 435 - T 14-10-2018 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 GYO_2235 62732eb67400540bb4de673d1e98c5ca 680 SMART SM00926 9 64 1.2E-17 T 14-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 GYO_0945 0d8fb05e813a3b4e5823ada28ae0d430 258 Gene3D G3DSA:1.10.10.200 21 97 5.9E-24 T 14-10-2018 IPR017856 Integrase-like, N-terminal GYO_0945 0d8fb05e813a3b4e5823ada28ae0d430 258 Gene3D G3DSA:3.30.70.980 150 220 1.0E-46 T 14-10-2018 IPR026564 Transcriptional regulator TACO1-like, domain 3 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 GYO_0945 0d8fb05e813a3b4e5823ada28ae0d430 258 SUPERFAMILY SSF75625 20 257 1.22E-80 T 14-10-2018 IPR029072 YebC-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 GYO_0945 0d8fb05e813a3b4e5823ada28ae0d430 258 Hamap MF_00693 Probable transcriptional regulatory protein YebC [yebC]. 20 256 31.723 T 14-10-2018 IPR002876 Transcriptional regulator TACO1-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 GYO_0945 0d8fb05e813a3b4e5823ada28ae0d430 258 Hamap MF_00918 Probable transcriptional regulatory protein YeeN [yeeN]. 20 257 58.051 T 14-10-2018 IPR026562 Probable transcriptional regulatory protein YeeN GYO_0945 0d8fb05e813a3b4e5823ada28ae0d430 258 TIGRFAM TIGR01033 TIGR01033: DNA-binding regulatory protein, YebC/PmpR family 20 254 3.4E-71 T 14-10-2018 IPR002876 Transcriptional regulator TACO1-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 GYO_0945 0d8fb05e813a3b4e5823ada28ae0d430 258 Gene3D G3DSA:3.30.70.980 102 253 1.0E-46 T 14-10-2018 IPR026564 Transcriptional regulator TACO1-like, domain 3 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 GYO_0945 0d8fb05e813a3b4e5823ada28ae0d430 258 Pfam PF01709 Transcriptional regulator 23 254 1.8E-81 T 14-10-2018 IPR002876 Transcriptional regulator TACO1-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 GYO_3132 e5b5f11ad7cca89e7ceb1de6e5799112 324 SUPERFAMILY SSF75005 41 322 1.03E-69 T 14-10-2018 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily GYO_3132 e5b5f11ad7cca89e7ceb1de6e5799112 324 PIRSF PIRSF026534 1 324 1.1E-101 T 14-10-2018 IPR016840 Glycoside hydrolase, family 43, endo-1, 5-alpha-L-arabinosidase GO:0046558 GYO_3132 e5b5f11ad7cca89e7ceb1de6e5799112 324 Pfam PF04616 Glycosyl hydrolases family 43 42 322 6.2E-48 T 14-10-2018 IPR006710 Glycoside hydrolase, family 43 GO:0004553|GO:0005975 GYO_3132 e5b5f11ad7cca89e7ceb1de6e5799112 324 Gene3D G3DSA:2.115.10.20 32 324 4.5E-93 T 14-10-2018 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily GYO_1285 b129bfe422d6000877123c66fd9ee557 314 Gene3D G3DSA:2.40.50.140 24 102 8.1E-8 T 14-10-2018 GYO_1285 b129bfe422d6000877123c66fd9ee557 314 SUPERFAMILY SSF109604 142 279 4.08E-17 T 14-10-2018 GYO_1285 b129bfe422d6000877123c66fd9ee557 314 SUPERFAMILY SSF50249 31 96 6.43E-6 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold GYO_1285 b129bfe422d6000877123c66fd9ee557 314 SMART SM00471 156 288 1.5E-7 T 14-10-2018 IPR003607 HD/PDEase domain GYO_1285 b129bfe422d6000877123c66fd9ee557 314 Gene3D G3DSA:1.10.3210.10 118 295 5.9E-14 T 14-10-2018 GYO_1285 b129bfe422d6000877123c66fd9ee557 314 Pfam PF01966 HD domain 161 278 3.0E-13 T 14-10-2018 IPR006674 HD domain GYO_1285 b129bfe422d6000877123c66fd9ee557 314 Hamap MF_01427 3'-5' exoribonuclease YhaM [yhaM]. 1 313 66.123 T 14-10-2018 IPR020873 3'-5' exoribonuclease YhaM GO:0000175 GYO_1990 8b37f98f2781d4972f3d1ba3b460a09c 221 TIGRFAM TIGR01103 fliP: flagellar biosynthetic protein FliP 25 221 6.1E-96 T 14-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 GYO_1990 8b37f98f2781d4972f3d1ba3b460a09c 221 ProSitePatterns PS01061 Flagella transport protein fliP family signature 2. 198 210 - T 14-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 GYO_1990 8b37f98f2781d4972f3d1ba3b460a09c 221 Pfam PF00813 FliP family 25 217 1.1E-82 T 14-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 GYO_1990 8b37f98f2781d4972f3d1ba3b460a09c 221 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 81 93 2.3E-27 T 14-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 GYO_1990 8b37f98f2781d4972f3d1ba3b460a09c 221 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 143 155 2.3E-27 T 14-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 GYO_1990 8b37f98f2781d4972f3d1ba3b460a09c 221 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 21 30 2.3E-27 T 14-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 GYO_1990 8b37f98f2781d4972f3d1ba3b460a09c 221 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 211 221 2.3E-27 T 14-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 GYO_1990 8b37f98f2781d4972f3d1ba3b460a09c 221 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 93 107 2.3E-27 T 14-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 GYO_1990 8b37f98f2781d4972f3d1ba3b460a09c 221 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 121 133 2.3E-27 T 14-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 GYO_1990 8b37f98f2781d4972f3d1ba3b460a09c 221 ProSitePatterns PS01060 Flagella transport protein fliP family signature 1. 150 165 - T 14-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 GYO_1990 8b37f98f2781d4972f3d1ba3b460a09c 221 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 150 170 1.1E-65 T 14-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 GYO_1990 8b37f98f2781d4972f3d1ba3b460a09c 221 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 42 62 1.1E-65 T 14-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 GYO_1990 8b37f98f2781d4972f3d1ba3b460a09c 221 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 23 42 1.1E-65 T 14-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 GYO_1990 8b37f98f2781d4972f3d1ba3b460a09c 221 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 171 192 1.1E-65 T 14-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 GYO_1990 8b37f98f2781d4972f3d1ba3b460a09c 221 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 62 81 1.1E-65 T 14-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 GYO_1990 8b37f98f2781d4972f3d1ba3b460a09c 221 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 195 220 1.1E-65 T 14-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 GYO_2242 9301066428f0056639f3643bdb85b397 483 Pfam PF03241 4-hydroxyphenylacetate 3-hydroxylase C terminal 280 477 2.2E-66 T 14-10-2018 IPR024719 HpaB/PvcC/4-BUDH C-terminal GYO_2242 9301066428f0056639f3643bdb85b397 483 PIRSF PIRSF000331 1 483 1.6E-144 T 14-10-2018 IPR004925 HpaB/PvcC/4-BUDH GYO_2242 9301066428f0056639f3643bdb85b397 483 Gene3D G3DSA:1.10.3140.10 3 146 1.4E-41 T 14-10-2018 GYO_2242 9301066428f0056639f3643bdb85b397 483 Gene3D G3DSA:1.20.140.10 275 482 1.1E-76 T 14-10-2018 GYO_2242 9301066428f0056639f3643bdb85b397 483 Pfam PF11794 4-hydroxyphenylacetate 3-hydroxylase N terminal 6 271 3.0E-82 T 14-10-2018 IPR024674 HpaB/PvcC/4-BUDH N-terminal GYO_2242 9301066428f0056639f3643bdb85b397 483 SUPERFAMILY SSF47203 263 477 6.07E-61 T 14-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 GYO_2242 9301066428f0056639f3643bdb85b397 483 SUPERFAMILY SSF56645 3 273 2.29E-65 T 14-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 GYO_2242 9301066428f0056639f3643bdb85b397 483 TIGRFAM TIGR02309 HpaB-1: 4-hydroxyphenylacetate 3-monooxygenase, oxygenase component 5 478 3.9E-153 T 14-10-2018 IPR012687 4-HPA 3-monooxygenase large component, Deinococcus-type GO:0010124|GO:0016712|GO:0050660 KEGG: 00350+1.14.14.9|MetaCyc: PWY-7431 GYO_2242 9301066428f0056639f3643bdb85b397 483 Gene3D G3DSA:2.40.110.10 148 273 1.6E-37 T 14-10-2018 GYO_1441 aebeeede24a33540a67af74cd013a4f0 329 SUPERFAMILY SSF52540 9 260 1.24E-74 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase GYO_1441 aebeeede24a33540a67af74cd013a4f0 329 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 240 307 6.2E-17 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 GYO_1441 aebeeede24a33540a67af74cd013a4f0 329 Gene3D G3DSA:3.40.50.300 7 329 1.3E-102 T 14-10-2018 GYO_1441 aebeeede24a33540a67af74cd013a4f0 329 SMART SM00382 45 238 2.3E-15 T 14-10-2018 IPR003593 AAA+ ATPase domain GYO_1441 aebeeede24a33540a67af74cd013a4f0 329 Pfam PF00005 ABC transporter 37 188 1.4E-35 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 GYO_1441 aebeeede24a33540a67af74cd013a4f0 329 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 239 327 3.4E-26 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 GYO_1441 aebeeede24a33540a67af74cd013a4f0 329 ProSitePatterns PS00211 ABC transporters family signature. 161 175 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 GYO_3506 1b0e40b860069b4babad4206e39dd508 207 SUPERFAMILY SSF50475 10 187 1.33E-39 T 14-10-2018 GYO_3506 1b0e40b860069b4babad4206e39dd508 207 PIRSF PIRSF010372 1 205 7.0E-68 T 14-10-2018 IPR007396 Transcriptional regulator PAI 2-type GYO_3506 1b0e40b860069b4babad4206e39dd508 207 Gene3D G3DSA:2.30.110.10 1 204 4.1E-61 T 14-10-2018 IPR012349 FMN-binding split barrel GO:0048037 GYO_3506 1b0e40b860069b4babad4206e39dd508 207 Pfam PF04299 Putative FMN-binding domain 1 160 1.5E-48 T 14-10-2018 IPR007396 Transcriptional regulator PAI 2-type GYO_2013 c76c65e703d2b02b53054af7f2ae11e5 1454 TIGRFAM TIGR00573 dnaq: exonuclease, DNA polymerase III, epsilon subunit family 430 655 6.3E-85 T 14-10-2018 IPR006054 DNA polymerase III epsilon subunit, exonuclease domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 GYO_2013 c76c65e703d2b02b53054af7f2ae11e5 1454 SMART SM00479 437 604 7.5E-61 T 14-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III GYO_2013 c76c65e703d2b02b53054af7f2ae11e5 1454 Gene3D G3DSA:1.10.100.20 1012 1059 3.1E-58 T 14-10-2018 GYO_2013 c76c65e703d2b02b53054af7f2ae11e5 1454 Pfam PF02811 PHP domain 353 712 2.9E-54 T 14-10-2018 IPR004013 PHP domain GO:0003824 GYO_2013 c76c65e703d2b02b53054af7f2ae11e5 1454 Gene3D G3DSA:2.40.50.140 236 337 2.3E-33 T 14-10-2018 GYO_2013 c76c65e703d2b02b53054af7f2ae11e5 1454 Pfam PF14579 Helix-hairpin-helix motif 1370 1446 1.6E-9 T 14-10-2018 IPR029460 DNA polymerase, helix-hairpin-helix motif KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 GYO_2013 c76c65e703d2b02b53054af7f2ae11e5 1454 Gene3D G3DSA:3.20.20.140 574 819 2.7E-60 T 14-10-2018 GYO_2013 c76c65e703d2b02b53054af7f2ae11e5 1454 Gene3D G3DSA:3.30.1900.20 990 1112 3.1E-58 T 14-10-2018 GYO_2013 c76c65e703d2b02b53054af7f2ae11e5 1454 Pfam PF07733 Bacterial DNA polymerase III alpha subunit 842 1252 8.1E-98 T 14-10-2018 IPR011708 Bacterial DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 GYO_2013 c76c65e703d2b02b53054af7f2ae11e5 1454 Gene3D G3DSA:1.10.150.700 1113 1201 2.8E-36 T 14-10-2018 GYO_2013 c76c65e703d2b02b53054af7f2ae11e5 1454 Gene3D G3DSA:1.10.150.700 1252 1303 1.6E-14 T 14-10-2018 GYO_2013 c76c65e703d2b02b53054af7f2ae11e5 1454 SUPERFAMILY SSF53098 437 893 1.97E-109 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily GYO_2013 c76c65e703d2b02b53054af7f2ae11e5 1454 TIGRFAM TIGR01405 polC_Gram_pos: DNA polymerase III, alpha subunit, Gram-positive type 247 1454 0.0 T 14-10-2018 IPR006308 DNA polymerase III, alpha subunit, Gram-positive type GO:0003677|GO:0003887|GO:0005737|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 GYO_2013 c76c65e703d2b02b53054af7f2ae11e5 1454 Gene3D G3DSA:1.10.150.870 1305 1440 5.9E-54 T 14-10-2018 GYO_2013 c76c65e703d2b02b53054af7f2ae11e5 1454 Pfam PF00929 Exonuclease 439 595 2.1E-44 T 14-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III GYO_2013 c76c65e703d2b02b53054af7f2ae11e5 1454 SUPERFAMILY SSF50249 251 338 1.2E-11 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold GYO_2013 c76c65e703d2b02b53054af7f2ae11e5 1454 Gene3D G3DSA:3.30.420.10 429 573 3.8E-45 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 GYO_2013 c76c65e703d2b02b53054af7f2ae11e5 1454 SMART SM00481 352 419 6.9E-29 T 14-10-2018 IPR003141 Polymerase/histidinol phosphatase, N-terminal GYO_2013 c76c65e703d2b02b53054af7f2ae11e5 1454 Pfam PF11490 DNA polymerase III polC-type N-terminus II 113 223 7.2E-29 T 14-10-2018 IPR024754 DNA polymerase III polC-like, N-terminal domain II KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 GYO_2013 c76c65e703d2b02b53054af7f2ae11e5 1454 Pfam PF14480 DNA polymerase III polC-type N-terminus I 27 99 2.1E-23 T 14-10-2018 IPR028112 DNA polymerase III polC-type, N-terminal domain I KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 GYO_2013 c76c65e703d2b02b53054af7f2ae11e5 1454 Hamap MF_00356 DNA polymerase III PolC-type [polC]. 1 1454 461.796 T 14-10-2018 IPR006308 DNA polymerase III, alpha subunit, Gram-positive type GO:0003677|GO:0003887|GO:0005737|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 GYO_2013 c76c65e703d2b02b53054af7f2ae11e5 1454 Gene3D G3DSA:3.20.20.140 352 417 2.5E-10 T 14-10-2018 GYO_3234 2d5e48167e3960fbff3fbde1039af45d 357 SUPERFAMILY SSF53187 5 350 3.63E-69 T 14-10-2018 GYO_3234 2d5e48167e3960fbff3fbde1039af45d 357 Gene3D G3DSA:2.40.30.40 75 162 3.0E-117 T 14-10-2018 IPR023367 Peptidase M42, domain 2 GYO_3234 2d5e48167e3960fbff3fbde1039af45d 357 SUPERFAMILY SSF101821 71 180 7.94E-32 T 14-10-2018 GYO_3234 2d5e48167e3960fbff3fbde1039af45d 357 Gene3D G3DSA:3.40.630.10 11 339 3.0E-117 T 14-10-2018 GYO_3234 2d5e48167e3960fbff3fbde1039af45d 357 Pfam PF05343 M42 glutamyl aminopeptidase 46 337 1.9E-112 T 14-10-2018 IPR008007 Peptidase M42 GYO_3234 2d5e48167e3960fbff3fbde1039af45d 357 PIRSF PIRSF001123 2 356 1.5E-147 T 14-10-2018 IPR008007 Peptidase M42 GYO_2848 12fd208666f83a90c1124dae4b5974a3 416 Pfam PF02272 DHHA1 domain 268 398 1.4E-12 T 14-10-2018 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7|Reactome: R-HSA-379716 GYO_2848 12fd208666f83a90c1124dae4b5974a3 416 Gene3D G3DSA:2.40.30.130 3 87 1.4E-26 T 14-10-2018 GYO_2848 12fd208666f83a90c1124dae4b5974a3 416 Pfam PF01411 tRNA synthetases class II (A) 16 94 1.0E-7 T 14-10-2018 IPR018164 Alanyl-tRNA synthetase, class IIc, N-terminal GO:0000166|GO:0004813|GO:0005524|GO:0006419 KEGG: 00970+6.1.1.7 GYO_2848 12fd208666f83a90c1124dae4b5974a3 416 SMART SM00863 186 228 1.1E-9 T 14-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 GYO_2848 12fd208666f83a90c1124dae4b5974a3 416 SUPERFAMILY SSF50447 4 85 5.3E-17 T 14-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily GYO_2848 12fd208666f83a90c1124dae4b5974a3 416 SUPERFAMILY SSF55186 94 235 2.88E-37 T 14-10-2018 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily GO:0000166 GYO_2848 12fd208666f83a90c1124dae4b5974a3 416 Gene3D G3DSA:3.10.310.40 296 403 2.6E-16 T 14-10-2018 GYO_2848 12fd208666f83a90c1124dae4b5974a3 416 Pfam PF07973 Threonyl and Alanyl tRNA synthetase second additional domain 186 226 7.4E-8 T 14-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 GYO_2848 12fd208666f83a90c1124dae4b5974a3 416 Gene3D G3DSA:3.30.980.10 91 245 1.6E-44 T 14-10-2018 GYO_1384 4316aa2b74df040726b52f02d8d5e97c 614 Pfam PF13537 Glutamine amidotransferase domain 48 169 6.5E-46 T 14-10-2018 IPR017932 Glutamine amidotransferase type 2 domain GYO_1384 4316aa2b74df040726b52f02d8d5e97c 614 TIGRFAM TIGR01536 asn_synth_AEB: asparagine synthase (glutamine-hydrolyzing) 2 532 4.4E-182 T 14-10-2018 IPR006426 Asparagine synthase, glutamine-hydrolyzing GO:0004066|GO:0006529 KEGG: 00250+6.3.5.4|Reactome: R-HSA-380994|Reactome: R-HSA-70614 GYO_1384 4316aa2b74df040726b52f02d8d5e97c 614 PIRSF PIRSF001589 1 610 5.8E-150 T 14-10-2018 IPR006426 Asparagine synthase, glutamine-hydrolyzing GO:0004066|GO:0006529 KEGG: 00250+6.3.5.4|Reactome: R-HSA-380994|Reactome: R-HSA-70614 GYO_1384 4316aa2b74df040726b52f02d8d5e97c 614 SUPERFAMILY SSF56235 1 226 9.44E-65 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal GYO_1384 4316aa2b74df040726b52f02d8d5e97c 614 Pfam PF00733 Asparagine synthase 242 604 2.6E-97 T 14-10-2018 IPR001962 Asparagine synthase GO:0004066|GO:0006529 GYO_1384 4316aa2b74df040726b52f02d8d5e97c 614 Gene3D G3DSA:3.60.20.10 2 184 4.4E-63 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal GYO_1384 4316aa2b74df040726b52f02d8d5e97c 614 SUPERFAMILY SSF52402 231 576 1.14E-75 T 14-10-2018 GYO_1944 5909fb6be5c35528aa0f42aaf8de8246 1186 Gene3D G3DSA:3.30.70.1620 578 667 7.8E-67 T 14-10-2018 GYO_1944 5909fb6be5c35528aa0f42aaf8de8246 1186 Gene3D G3DSA:3.40.50.300 1025 1186 4.0E-54 T 14-10-2018 GYO_1944 5909fb6be5c35528aa0f42aaf8de8246 1186 SUPERFAMILY SSF75553 484 686 2.48E-56 T 14-10-2018 IPR036277 SMCs flexible hinge superfamily GO:0005515|GO:0005524|GO:0005694|GO:0051276 GYO_1944 5909fb6be5c35528aa0f42aaf8de8246 1186 Pfam PF06470 SMC proteins Flexible Hinge Domain 519 637 1.4E-30 T 14-10-2018 IPR010935 SMCs flexible hinge GO:0005515|GO:0005524|GO:0005694|GO:0051276 GYO_1944 5909fb6be5c35528aa0f42aaf8de8246 1186 PIRSF PIRSF005719 1 1186 0.0 T 14-10-2018 IPR024704 Structural maintenance of chromosomes protein GYO_1944 5909fb6be5c35528aa0f42aaf8de8246 1186 TIGRFAM TIGR02168 SMC_prok_B: chromosome segregation protein SMC 2 1178 0.0 T 14-10-2018 IPR011890 Structural maintenance of chromosomes protein, prokaryotic GO:0007062|GO:0030261 GYO_1944 5909fb6be5c35528aa0f42aaf8de8246 1186 Gene3D G3DSA:3.40.50.300 1 240 1.2E-59 T 14-10-2018 GYO_1944 5909fb6be5c35528aa0f42aaf8de8246 1186 Pfam PF02463 RecF/RecN/SMC N terminal domain 2 1171 4.8E-70 T 14-10-2018 IPR003395 RecF/RecN/SMC, N-terminal GYO_1944 5909fb6be5c35528aa0f42aaf8de8246 1186 SMART SM00968 518 637 9.5E-43 T 14-10-2018 IPR010935 SMCs flexible hinge GO:0005515|GO:0005524|GO:0005694|GO:0051276 GYO_1944 5909fb6be5c35528aa0f42aaf8de8246 1186 SUPERFAMILY SSF52540 1 1163 7.16E-54 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase GYO_1944 5909fb6be5c35528aa0f42aaf8de8246 1186 Hamap MF_01894 Chromosome partition protein Smc [smc]. 1 1180 25.064 T 14-10-2018 IPR011890 Structural maintenance of chromosomes protein, prokaryotic GO:0007062|GO:0030261 GYO_1944 5909fb6be5c35528aa0f42aaf8de8246 1186 Gene3D G3DSA:1.20.1060.20 495 679 7.8E-67 T 14-10-2018 GYO_1944 5909fb6be5c35528aa0f42aaf8de8246 1186 SUPERFAMILY SSF57997 671 862 5.1E-8 T 14-10-2018 GYO_2055 8eca2bdc70ea3bff0350ff63c0463ae3 392 Gene3D G3DSA:3.40.640.10 56 290 9.9E-146 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 GYO_2055 8eca2bdc70ea3bff0350ff63c0463ae3 392 SUPERFAMILY SSF53383 2 389 1.48E-114 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase GYO_2055 8eca2bdc70ea3bff0350ff63c0463ae3 392 Pfam PF00155 Aminotransferase class I and II 40 382 1.8E-67 T 14-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 GYO_2055 8eca2bdc70ea3bff0350ff63c0463ae3 392 TIGRFAM TIGR01825 gly_Cac_T_rel: putative pyridoxal phosphate-dependent acyltransferase 8 392 4.0E-212 T 14-10-2018 IPR010962 Putative 8-amino-7-oxononanoate synthase, Archaea/Firmicutes type GYO_2055 8eca2bdc70ea3bff0350ff63c0463ae3 392 Gene3D G3DSA:3.90.1150.10 36 383 9.9E-146 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 GYO_2055 8eca2bdc70ea3bff0350ff63c0463ae3 392 ProSitePatterns PS00599 Aminotransferases class-II pyridoxal-phosphate attachment site. 237 246 - T 14-10-2018 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site GO:0016740 GYO_2055 8eca2bdc70ea3bff0350ff63c0463ae3 392 TIGRFAM TIGR00858 bioF: 8-amino-7-oxononanoate synthase 23 382 2.1E-132 T 14-10-2018 IPR004723 8-amino-7-oxononanoate synthase, Archaea/Proteobacteria type GO:0008710|GO:0009102 KEGG: 00780+2.3.1.47|MetaCyc: PWY-6519|MetaCyc: PWY-6578|MetaCyc: PWY-7147 GYO_1717 aa980926e76a9183cafa26cfceded080 637 SUPERFAMILY SSF81665 86 612 1.22E-15 T 14-10-2018 IPR023298 P-type ATPase, transmembrane domain superfamily Reactome: R-HSA-936837 GYO_1717 aa980926e76a9183cafa26cfceded080 637 SUPERFAMILY SSF81660 346 468 8.83E-25 T 14-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 GYO_1717 aa980926e76a9183cafa26cfceded080 637 Pfam PF00702 haloacid dehalogenase-like hydrolase 332 547 8.8E-41 T 14-10-2018 GYO_1717 aa980926e76a9183cafa26cfceded080 637 Pfam PF00122 E1-E2 ATPase 135 313 4.0E-50 T 14-10-2018 GYO_1717 aa980926e76a9183cafa26cfceded080 637 SUPERFAMILY SSF81653 137 234 1.96E-28 T 14-10-2018 IPR008250 P-type ATPase, A domain superfamily Reactome: R-HSA-936837 GYO_1717 aa980926e76a9183cafa26cfceded080 637 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 337 343 - T 14-10-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 GYO_1717 aa980926e76a9183cafa26cfceded080 637 SUPERFAMILY SSF56784 333 632 5.91E-58 T 14-10-2018 IPR036412 HAD-like superfamily GYO_1717 aa980926e76a9183cafa26cfceded080 637 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 107 612 2.3E-86 T 14-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 GYO_1717 aa980926e76a9183cafa26cfceded080 637 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 84 635 1.6E-187 T 14-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 GYO_1717 aa980926e76a9183cafa26cfceded080 637 TIGRFAM TIGR01512 ATPase-IB2_Cd: cadmium-translocating P-type ATPase 84 396 2.0E-94 T 14-10-2018 GYO_1717 aa980926e76a9183cafa26cfceded080 637 Gene3D G3DSA:3.40.1110.10 346 465 2.4E-87 T 14-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 GYO_1717 aa980926e76a9183cafa26cfceded080 637 PRINTS PR00941 Cadmium-transporting ATPase signature 219 233 1.4E-13 T 14-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 GYO_1717 aa980926e76a9183cafa26cfceded080 637 PRINTS PR00941 Cadmium-transporting ATPase signature 64 76 1.4E-13 T 14-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 GYO_1717 aa980926e76a9183cafa26cfceded080 637 PRINTS PR00941 Cadmium-transporting ATPase signature 47 64 1.4E-13 T 14-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 GYO_1717 aa980926e76a9183cafa26cfceded080 637 PRINTS PR00941 Cadmium-transporting ATPase signature 119 139 1.4E-13 T 14-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 GYO_1717 aa980926e76a9183cafa26cfceded080 637 PRINTS PR00941 Cadmium-transporting ATPase signature 139 155 1.4E-13 T 14-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 GYO_1717 aa980926e76a9183cafa26cfceded080 637 PRINTS PR00941 Cadmium-transporting ATPase signature 200 216 1.4E-13 T 14-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 GYO_1717 aa980926e76a9183cafa26cfceded080 637 Gene3D G3DSA:2.70.150.20 122 238 4.7E-38 T 14-10-2018 GYO_1717 aa980926e76a9183cafa26cfceded080 637 ProSitePatterns PS01229 Hypothetical cof family signature 2. 533 555 - T 14-10-2018 GYO_1717 aa980926e76a9183cafa26cfceded080 637 Gene3D G3DSA:3.40.50.1000 316 584 2.4E-87 T 14-10-2018 IPR023214 HAD superfamily GYO_1717 aa980926e76a9183cafa26cfceded080 637 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 556 568 6.8E-33 T 14-10-2018 GYO_1717 aa980926e76a9183cafa26cfceded080 637 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 458 469 6.8E-33 T 14-10-2018 GYO_1717 aa980926e76a9183cafa26cfceded080 637 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 335 349 6.8E-33 T 14-10-2018 GYO_1717 aa980926e76a9183cafa26cfceded080 637 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 533 552 6.8E-33 T 14-10-2018 GYO_1717 aa980926e76a9183cafa26cfceded080 637 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 184 198 6.8E-33 T 14-10-2018 GYO_1717 aa980926e76a9183cafa26cfceded080 637 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 480 490 6.8E-33 T 14-10-2018 GYO_0017 643c96ba7accffe4137b807b63367a70 480 Pfam PF02403 Seryl-tRNA synthetase N-terminal domain 56 163 6.7E-32 T 14-10-2018 IPR015866 Serine-tRNA synthetase, type1, N-terminal KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: R-HSA-2408557|Reactome: R-HSA-379716 GYO_0017 643c96ba7accffe4137b807b63367a70 480 SUPERFAMILY SSF55681 172 477 8.02E-107 T 14-10-2018 GYO_0017 643c96ba7accffe4137b807b63367a70 480 TIGRFAM TIGR00414 serS: serine--tRNA ligase 56 472 1.1E-189 T 14-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 GYO_0017 643c96ba7accffe4137b807b63367a70 480 Gene3D G3DSA:1.10.287.40 56 160 1.3E-25 T 14-10-2018 GYO_0017 643c96ba7accffe4137b807b63367a70 480 Hamap MF_00176 Serine--tRNA ligase [serS]. 56 477 44.392 T 14-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 GYO_0017 643c96ba7accffe4137b807b63367a70 480 PIRSF PIRSF001529 56 480 2.6E-191 T 14-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 GYO_0017 643c96ba7accffe4137b807b63367a70 480 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 277 455 5.8E-38 T 14-10-2018 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 GYO_0017 643c96ba7accffe4137b807b63367a70 480 Gene3D G3DSA:3.30.930.10 161 480 5.9E-130 T 14-10-2018 GYO_0017 643c96ba7accffe4137b807b63367a70 480 PRINTS PR00981 Seryl-tRNA synthetase signature 371 384 3.3E-32 T 14-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 GYO_0017 643c96ba7accffe4137b807b63367a70 480 PRINTS PR00981 Seryl-tRNA synthetase signature 406 422 3.3E-32 T 14-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 GYO_0017 643c96ba7accffe4137b807b63367a70 480 PRINTS PR00981 Seryl-tRNA synthetase signature 319 331 3.3E-32 T 14-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 GYO_0017 643c96ba7accffe4137b807b63367a70 480 PRINTS PR00981 Seryl-tRNA synthetase signature 388 404 3.3E-32 T 14-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 GYO_0017 643c96ba7accffe4137b807b63367a70 480 PRINTS PR00981 Seryl-tRNA synthetase signature 331 344 3.3E-32 T 14-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 GYO_0017 643c96ba7accffe4137b807b63367a70 480 SUPERFAMILY SSF46589 56 168 2.82E-31 T 14-10-2018 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm GO:0000166 GYO_3576 54344d80c722c909e4394882ec8fbdfe 341 ProSitePatterns PS00211 ABC transporters family signature. 141 155 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 GYO_3576 54344d80c722c909e4394882ec8fbdfe 341 Gene3D G3DSA:3.30.70.260 247 341 1.4E-31 T 14-10-2018 GYO_3576 54344d80c722c909e4394882ec8fbdfe 341 Pfam PF00005 ABC transporter 22 169 1.3E-37 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 GYO_3576 54344d80c722c909e4394882ec8fbdfe 341 Pfam PF09383 NIL domain 266 337 2.2E-22 T 14-10-2018 IPR018449 NIL domain GYO_3576 54344d80c722c909e4394882ec8fbdfe 341 SUPERFAMILY SSF52540 1 240 4.37E-83 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase GYO_3576 54344d80c722c909e4394882ec8fbdfe 341 SMART SM00930 263 338 1.4E-30 T 14-10-2018 IPR018449 NIL domain GYO_3576 54344d80c722c909e4394882ec8fbdfe 341 SMART SM00382 30 218 2.2E-16 T 14-10-2018 IPR003593 AAA+ ATPase domain GYO_3576 54344d80c722c909e4394882ec8fbdfe 341 SUPERFAMILY SSF55021 249 340 2.52E-24 T 14-10-2018 GYO_3576 54344d80c722c909e4394882ec8fbdfe 341 Gene3D G3DSA:3.40.50.300 1 246 9.9E-78 T 14-10-2018 GYO_2903 2f03cec45295df20ed9658d21cb135d4 273 Pfam PF13411 MerR HTH family regulatory protein 9 76 1.1E-13 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 GYO_2903 2f03cec45295df20ed9658d21cb135d4 273 SUPERFAMILY SSF55136 134 270 6.8E-15 T 14-10-2018 IPR011256 Regulatory factor, effector binding domain superfamily GYO_2903 2f03cec45295df20ed9658d21cb135d4 273 Gene3D G3DSA:1.10.1660.10 7 145 1.3E-28 T 14-10-2018 GYO_2903 2f03cec45295df20ed9658d21cb135d4 273 SUPERFAMILY SSF46955 7 112 2.23E-24 T 14-10-2018 IPR009061 Putative DNA-binding domain superfamily GYO_2903 2f03cec45295df20ed9658d21cb135d4 273 SMART SM00422 9 78 4.0E-25 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 GYO_2903 2f03cec45295df20ed9658d21cb135d4 273 ProSitePatterns PS00552 MerR-type HTH domain signature. 12 34 - T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 GYO_2834 8404f4ee7ca459200c3f36fe787ca61a 189 Gene3D G3DSA:3.40.50.620 1 188 3.4E-67 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold GYO_2834 8404f4ee7ca459200c3f36fe787ca61a 189 TIGRFAM TIGR00482 TIGR00482: nicotinate (nicotinamide) nucleotide adenylyltransferase 6 187 4.7E-58 T 14-10-2018 IPR005248 Nicotinate/nicotinamide nucleotide adenylyltransferase GO:0009435|GO:0016779 KEGG: 00760+2.7.7.18|MetaCyc: PWY-5381|MetaCyc: PWY-5653|MetaCyc: PWY-7761|Reactome: R-HSA-196807 GYO_2834 8404f4ee7ca459200c3f36fe787ca61a 189 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 4 68 1.3E-14 T 14-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 GYO_2834 8404f4ee7ca459200c3f36fe787ca61a 189 Hamap MF_00244 Probable nicotinate-nucleotide adenylyltransferase [nadD]. 2 188 32.73 T 14-10-2018 IPR005248 Nicotinate/nicotinamide nucleotide adenylyltransferase GO:0009435|GO:0016779 KEGG: 00760+2.7.7.18|MetaCyc: PWY-5381|MetaCyc: PWY-5653|MetaCyc: PWY-7761|Reactome: R-HSA-196807 GYO_2834 8404f4ee7ca459200c3f36fe787ca61a 189 SUPERFAMILY SSF52374 1 187 3.75E-55 T 14-10-2018 GYO_2834 8404f4ee7ca459200c3f36fe787ca61a 189 Pfam PF01467 Cytidylyltransferase-like 6 162 3.9E-35 T 14-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 GYO_2074 877086c997761a59b48ea76dbeea6574 4563 Pfam PF08659 KR domain 1527 1712 5.9E-52 T 14-10-2018 IPR013968 Polyketide synthase, ketoreductase domain Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 GYO_2074 877086c997761a59b48ea76dbeea6574 4563 Pfam PF08659 KR domain 3714 3907 2.7E-39 T 14-10-2018 IPR013968 Polyketide synthase, ketoreductase domain Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 GYO_2074 877086c997761a59b48ea76dbeea6574 4563 SUPERFAMILY SSF51735 3711 3943 1.1E-30 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily GYO_2074 877086c997761a59b48ea76dbeea6574 4563 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 4253 4269 - T 14-10-2018 IPR018201 Beta-ketoacyl synthase, active site GYO_2074 877086c997761a59b48ea76dbeea6574 4563 Gene3D G3DSA:3.30.70.3050 3368 3465 6.1E-248 T 14-10-2018 GYO_2074 877086c997761a59b48ea76dbeea6574 4563 Gene3D G3DSA:3.40.47.10 441 1037 2.3E-248 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 GYO_2074 877086c997761a59b48ea76dbeea6574 4563 SMART SM01294 2619 2685 4.7E-37 T 14-10-2018 GYO_2074 877086c997761a59b48ea76dbeea6574 4563 SMART SM01294 2767 2833 5.7E-35 T 14-10-2018 GYO_2074 877086c997761a59b48ea76dbeea6574 4563 SMART SM01294 3992 4058 5.0E-7 T 14-10-2018 GYO_2074 877086c997761a59b48ea76dbeea6574 4563 SUPERFAMILY SSF53901 4107 4456 2.58E-65 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 GYO_2074 877086c997761a59b48ea76dbeea6574 4563 ProSitePatterns PS00012 Phosphopantetheine attachment site. 4017 4032 - T 14-10-2018 IPR006162 Phosphopantetheine attachment site GYO_2074 877086c997761a59b48ea76dbeea6574 4563 SMART SM00825 Beta-ketoacyl synthase 1939 2378 1.3E-206 T 14-10-2018 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain GYO_2074 877086c997761a59b48ea76dbeea6574 4563 SMART SM00825 Beta-ketoacyl synthase 2900 3321 1.2E-196 T 14-10-2018 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain GYO_2074 877086c997761a59b48ea76dbeea6574 4563 SMART SM00825 Beta-ketoacyl synthase 4110 4513 1.4E-101 T 14-10-2018 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain GYO_2074 877086c997761a59b48ea76dbeea6574 4563 SMART SM00825 Beta-ketoacyl synthase 441 879 2.9E-191 T 14-10-2018 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain GYO_2074 877086c997761a59b48ea76dbeea6574 4563 ProSitePatterns PS00012 Phosphopantetheine attachment site. 1835 1850 - T 14-10-2018 IPR006162 Phosphopantetheine attachment site GYO_2074 877086c997761a59b48ea76dbeea6574 4563 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 3712 3908 3.9E-37 T 14-10-2018 GYO_2074 877086c997761a59b48ea76dbeea6574 4563 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 1527 1713 2.7E-46 T 14-10-2018 GYO_2074 877086c997761a59b48ea76dbeea6574 4563 Pfam PF00550 Phosphopantetheine attachment site 1811 1874 1.5E-12 T 14-10-2018 IPR009081 Phosphopantetheine binding ACP domain GYO_2074 877086c997761a59b48ea76dbeea6574 4563 Pfam PF00550 Phosphopantetheine attachment site 2620 2683 6.9E-13 T 14-10-2018 IPR009081 Phosphopantetheine binding ACP domain GYO_2074 877086c997761a59b48ea76dbeea6574 4563 Pfam PF00550 Phosphopantetheine attachment site 2767 2833 1.5E-12 T 14-10-2018 IPR009081 Phosphopantetheine binding ACP domain GYO_2074 877086c997761a59b48ea76dbeea6574 4563 Pfam PF00550 Phosphopantetheine attachment site 322 386 8.2E-8 T 14-10-2018 IPR009081 Phosphopantetheine binding ACP domain GYO_2074 877086c997761a59b48ea76dbeea6574 4563 Pfam PF00550 Phosphopantetheine attachment site 3992 4058 4.2E-16 T 14-10-2018 IPR009081 Phosphopantetheine binding ACP domain GYO_2074 877086c997761a59b48ea76dbeea6574 4563 SMART SM00826 1056 1221 4.7E-19 T 14-10-2018 IPR020807 Polyketide synthase, dehydratase domain Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 GYO_2074 877086c997761a59b48ea76dbeea6574 4563 SUPERFAMILY SSF53901 1935 2309 3.34E-89 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 GYO_2074 877086c997761a59b48ea76dbeea6574 4563 ProSitePatterns PS00012 Phosphopantetheine attachment site. 345 360 - T 14-10-2018 IPR006162 Phosphopantetheine attachment site GYO_2074 877086c997761a59b48ea76dbeea6574 4563 Gene3D G3DSA:3.40.47.10 1939 2544 6.9E-264 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 GYO_2074 877086c997761a59b48ea76dbeea6574 4563 SUPERFAMILY SSF47336 2613 2703 1.83E-16 T 14-10-2018 IPR036736 ACP-like superfamily GYO_2074 877086c997761a59b48ea76dbeea6574 4563 SUPERFAMILY SSF47336 1806 1880 6.81E-12 T 14-10-2018 IPR036736 ACP-like superfamily GYO_2074 877086c997761a59b48ea76dbeea6574 4563 Gene3D G3DSA:3.30.70.3050 2435 2533 6.9E-264 T 14-10-2018 GYO_2074 877086c997761a59b48ea76dbeea6574 4563 Gene3D G3DSA:3.40.50.720 1349 1769 4.3E-138 T 14-10-2018 GYO_2074 877086c997761a59b48ea76dbeea6574 4563 SUPERFAMILY SSF47336 2763 2912 1.7E-18 T 14-10-2018 IPR036736 ACP-like superfamily GYO_2074 877086c997761a59b48ea76dbeea6574 4563 ProSitePatterns PS00012 Phosphopantetheine attachment site. 2792 2807 - T 14-10-2018 IPR006162 Phosphopantetheine attachment site GYO_2074 877086c997761a59b48ea76dbeea6574 4563 SUPERFAMILY SSF53901 2895 3257 4.99E-92 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 GYO_2074 877086c997761a59b48ea76dbeea6574 4563 Gene3D G3DSA:3.40.47.10 4104 4523 7.6E-130 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 GYO_2074 877086c997761a59b48ea76dbeea6574 4563 Gene3D G3DSA:3.40.47.10 2900 3484 6.1E-248 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 GYO_2074 877086c997761a59b48ea76dbeea6574 4563 Gene3D G3DSA:3.40.50.720 3498 3964 1.2E-122 T 14-10-2018 GYO_2074 877086c997761a59b48ea76dbeea6574 4563 Pfam PF14765 Polyketide synthase dehydratase 1056 1343 1.4E-56 T 14-10-2018 IPR020807 Polyketide synthase, dehydratase domain Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 GYO_2074 877086c997761a59b48ea76dbeea6574 4563 Pfam PF14765 Polyketide synthase dehydratase 9 277 1.1E-22 T 14-10-2018 IPR020807 Polyketide synthase, dehydratase domain Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 GYO_2074 877086c997761a59b48ea76dbeea6574 4563 SUPERFAMILY SSF51735 3507 3695 1.89E-11 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily GYO_2074 877086c997761a59b48ea76dbeea6574 4563 SUPERFAMILY SSF47336 3990 4120 7.2E-15 T 14-10-2018 IPR036736 ACP-like superfamily GYO_2074 877086c997761a59b48ea76dbeea6574 4563 Gene3D G3DSA:1.10.1200.10 2762 2849 2.2E-26 T 14-10-2018 IPR036736 ACP-like superfamily GYO_2074 877086c997761a59b48ea76dbeea6574 4563 Gene3D G3DSA:1.10.1200.10 2612 2703 2.7E-28 T 14-10-2018 IPR036736 ACP-like superfamily GYO_2074 877086c997761a59b48ea76dbeea6574 4563 SUPERFAMILY SSF47336 317 453 6.62E-10 T 14-10-2018 IPR036736 ACP-like superfamily GYO_2074 877086c997761a59b48ea76dbeea6574 4563 Gene3D G3DSA:3.10.129.110 1 273 1.3E-100 T 14-10-2018 GYO_2074 877086c997761a59b48ea76dbeea6574 4563 SMART SM00823 Phosphopantetheine attachment site 319 390 0.0038 T 14-10-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 GYO_2074 877086c997761a59b48ea76dbeea6574 4563 SMART SM00823 Phosphopantetheine attachment site 3991 4062 1.9E-8 T 14-10-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 GYO_2074 877086c997761a59b48ea76dbeea6574 4563 SMART SM00823 Phosphopantetheine attachment site 1809 1879 2.1E-10 T 14-10-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 GYO_2074 877086c997761a59b48ea76dbeea6574 4563 SMART SM00823 Phosphopantetheine attachment site 2766 2837 6.2E-16 T 14-10-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 GYO_2074 877086c997761a59b48ea76dbeea6574 4563 SMART SM00823 Phosphopantetheine attachment site 2617 2689 1.1E-16 T 14-10-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 GYO_2074 877086c997761a59b48ea76dbeea6574 4563 SUPERFAMILY SSF51735 1522 1768 1.17E-35 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily GYO_2074 877086c997761a59b48ea76dbeea6574 4563 Gene3D G3DSA:3.10.129.110 1062 1347 8.2E-80 T 14-10-2018 GYO_2074 877086c997761a59b48ea76dbeea6574 4563 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 1937 2191 3.4E-91 T 14-10-2018 IPR014030 Beta-ketoacyl synthase, N-terminal GYO_2074 877086c997761a59b48ea76dbeea6574 4563 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 2899 3142 4.3E-87 T 14-10-2018 IPR014030 Beta-ketoacyl synthase, N-terminal GYO_2074 877086c997761a59b48ea76dbeea6574 4563 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 440 692 3.4E-89 T 14-10-2018 IPR014030 Beta-ketoacyl synthase, N-terminal GYO_2074 877086c997761a59b48ea76dbeea6574 4563 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 4108 4339 2.1E-62 T 14-10-2018 IPR014030 Beta-ketoacyl synthase, N-terminal GYO_2074 877086c997761a59b48ea76dbeea6574 4563 Gene3D G3DSA:3.30.70.3290 897 1025 2.3E-248 T 14-10-2018 GYO_2074 877086c997761a59b48ea76dbeea6574 4563 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 3150 3267 1.5E-42 T 14-10-2018 IPR014031 Beta-ketoacyl synthase, C-terminal GYO_2074 877086c997761a59b48ea76dbeea6574 4563 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 2199 2316 4.6E-42 T 14-10-2018 IPR014031 Beta-ketoacyl synthase, C-terminal GYO_2074 877086c997761a59b48ea76dbeea6574 4563 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 4347 4461 1.4E-33 T 14-10-2018 IPR014031 Beta-ketoacyl synthase, C-terminal GYO_2074 877086c997761a59b48ea76dbeea6574 4563 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 700 817 5.6E-39 T 14-10-2018 IPR014031 Beta-ketoacyl synthase, C-terminal GYO_2074 877086c997761a59b48ea76dbeea6574 4563 Pfam PF16197 Ketoacyl-synthetase C-terminal extension 821 942 3.3E-11 T 14-10-2018 IPR032821 Ketoacyl-synthetase, C-terminal extension Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 GYO_2074 877086c997761a59b48ea76dbeea6574 4563 Pfam PF16197 Ketoacyl-synthetase C-terminal extension 3270 3383 1.7E-17 T 14-10-2018 IPR032821 Ketoacyl-synthetase, C-terminal extension Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 GYO_2074 877086c997761a59b48ea76dbeea6574 4563 Pfam PF16197 Ketoacyl-synthetase C-terminal extension 2320 2436 3.0E-12 T 14-10-2018 IPR032821 Ketoacyl-synthetase, C-terminal extension Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 GYO_2074 877086c997761a59b48ea76dbeea6574 4563 Gene3D G3DSA:1.10.1200.10 305 391 2.7E-13 T 14-10-2018 IPR036736 ACP-like superfamily GYO_2074 877086c997761a59b48ea76dbeea6574 4563 Gene3D G3DSA:1.10.1200.10 3978 4062 1.3E-19 T 14-10-2018 IPR036736 ACP-like superfamily GYO_2074 877086c997761a59b48ea76dbeea6574 4563 ProSitePatterns PS00012 Phosphopantetheine attachment site. 2644 2659 - T 14-10-2018 IPR006162 Phosphopantetheine attachment site GYO_2074 877086c997761a59b48ea76dbeea6574 4563 Gene3D G3DSA:1.10.1200.10 1800 1883 1.6E-15 T 14-10-2018 IPR036736 ACP-like superfamily GYO_2074 877086c997761a59b48ea76dbeea6574 4563 SUPERFAMILY SSF53901 438 807 4.14E-88 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 GYO_4220 9132008bb612c62059a4f420df7910b8 416 SUPERFAMILY SSF54909 61 408 3.22E-83 T 14-10-2018 IPR011008 Dimeric alpha-beta barrel GYO_4220 9132008bb612c62059a4f420df7910b8 416 TIGRFAM TIGR01412 tat_substr_1: Tat-translocated enzyme 5 415 3.7E-185 T 14-10-2018 IPR006313 Deferrochelatase/peroxidase EfeB GO:0004601|GO:0015684|GO:0020037|GO:0033212 GYO_4220 9132008bb612c62059a4f420df7910b8 416 Pfam PF10518 TAT (twin-arginine translocation) pathway signal sequence 11 34 9.9E-7 T 14-10-2018 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal GYO_4220 9132008bb612c62059a4f420df7910b8 416 TIGRFAM TIGR01413 Dyp_perox_fam: Dyp-type peroxidase family 66 404 2.8E-103 T 14-10-2018 IPR006314 Dyp-type peroxidase GO:0004601|GO:0020037|GO:0055114 GYO_4220 9132008bb612c62059a4f420df7910b8 416 Pfam PF04261 Dyp-type peroxidase family 66 404 2.4E-120 T 14-10-2018 IPR006314 Dyp-type peroxidase GO:0004601|GO:0020037|GO:0055114 GYO_1065 2623736b85dfc29d927d5e5e5f9f80f0 317 Gene3D G3DSA:3.40.50.720 32 192 1.5E-49 T 14-10-2018 GYO_1065 2623736b85dfc29d927d5e5e5f9f80f0 317 SUPERFAMILY SSF48179 198 316 2.15E-25 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 GYO_1065 2623736b85dfc29d927d5e5e5f9f80f0 317 SUPERFAMILY SSF51735 32 193 1.36E-41 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily GYO_1065 2623736b85dfc29d927d5e5e5f9f80f0 317 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 33 191 1.1E-41 T 14-10-2018 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0050661 GYO_1065 2623736b85dfc29d927d5e5e5f9f80f0 317 Pfam PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase 198 315 2.1E-17 T 14-10-2018 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain GO:0051287 GYO_1065 2623736b85dfc29d927d5e5e5f9f80f0 317 Gene3D G3DSA:1.10.1040.10 193 317 3.7E-33 T 14-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 GYO_1065 2623736b85dfc29d927d5e5e5f9f80f0 317 PIRSF PIRSF000103 29 317 1.6E-91 T 14-10-2018 IPR015815 3-hydroxyisobutyrate dehydrogenase-related GO:0016491|GO:0055114 Reactome: R-HSA-70895 GYO_2385 44f677b81691a4ca73e837cb5889cd37 426 Gene3D G3DSA:3.90.550.10 4 239 4.5E-61 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases GYO_2385 44f677b81691a4ca73e837cb5889cd37 426 Pfam PF00535 Glycosyl transferase family 2 6 168 9.5E-26 T 14-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 GYO_2385 44f677b81691a4ca73e837cb5889cd37 426 SUPERFAMILY SSF53448 4 222 6.14E-40 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases GYO_2494 d1605a0a198665b74591f68f4f93efb6 338 Pfam PF02885 Glycosyl transferase family, helical bundle domain 5 64 3.8E-15 T 14-10-2018 IPR017459 Glycosyl transferase family 3, N-terminal domain Reactome: R-HSA-73614|Reactome: R-HSA-73621 GYO_2494 d1605a0a198665b74591f68f4f93efb6 338 SUPERFAMILY SSF47648 1 68 1.7E-16 T 14-10-2018 IPR036320 Glycosyl transferase family 3, N-terminal domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 GYO_2494 d1605a0a198665b74591f68f4f93efb6 338 Pfam PF00591 Glycosyl transferase family, a/b domain 71 322 3.7E-102 T 14-10-2018 IPR000312 Glycosyl transferase, family 3 GO:0016757 Reactome: R-HSA-73614|Reactome: R-HSA-73621 GYO_2494 d1605a0a198665b74591f68f4f93efb6 338 TIGRFAM TIGR01245 trpD: anthranilate phosphoribosyltransferase 6 331 5.9E-134 T 14-10-2018 IPR005940 Anthranilate phosphoribosyl transferase GO:0000162|GO:0004048 KEGG: 00400+2.4.2.18 GYO_2494 d1605a0a198665b74591f68f4f93efb6 338 Hamap MF_00211 Anthranilate phosphoribosyltransferase [trpD]. 3 332 38.11 T 14-10-2018 IPR005940 Anthranilate phosphoribosyl transferase GO:0000162|GO:0004048 KEGG: 00400+2.4.2.18 GYO_2494 d1605a0a198665b74591f68f4f93efb6 338 SUPERFAMILY SSF52418 71 332 8.9E-87 T 14-10-2018 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 GYO_2494 d1605a0a198665b74591f68f4f93efb6 338 Gene3D G3DSA:1.20.970.10 6 181 1.0E-121 T 14-10-2018 GYO_2494 d1605a0a198665b74591f68f4f93efb6 338 Gene3D G3DSA:3.40.1030.10 71 315 1.0E-121 T 14-10-2018 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 GYO_0742 851a7b62902221ded286782ddb2d5c57 197 Pfam PF13376 Bacteriocin-protection, YdeI or OmpD-Associated 133 192 9.8E-20 T 14-10-2018 GYO_0742 851a7b62902221ded286782ddb2d5c57 197 SUPERFAMILY SSF159888 9 125 3.79E-24 T 14-10-2018 GYO_0742 851a7b62902221ded286782ddb2d5c57 197 Pfam PF08818 Domain of unknown function (DU1801) 20 117 6.6E-17 T 14-10-2018 IPR014922 Domain of unknown function DUF1801 GYO_0742 851a7b62902221ded286782ddb2d5c57 197 PIRSF PIRSF021308 1 197 1.7E-99 T 14-10-2018 IPR016786 Uncharacterised protein YdeI, bacterial GYO_2972 28c86248004010b978ba728f82fcf588 157 PIRSF PIRSF006092 1 157 2.0E-54 T 14-10-2018 IPR023459 Transcription elongation factor GreA/GreB family GO:0070063 GYO_2972 28c86248004010b978ba728f82fcf588 157 Gene3D G3DSA:1.10.287.180 5 78 4.6E-32 T 14-10-2018 IPR036805 Transcription elongation factor, GreA/GreB, N-terminal domain superfamily GO:0003677|GO:0032784 GYO_2972 28c86248004010b978ba728f82fcf588 157 SUPERFAMILY SSF46557 6 80 9.16E-28 T 14-10-2018 IPR036805 Transcription elongation factor, GreA/GreB, N-terminal domain superfamily GO:0003677|GO:0032784 GYO_2972 28c86248004010b978ba728f82fcf588 157 TIGRFAM TIGR01462 greA: transcription elongation factor GreA 8 157 2.2E-59 T 14-10-2018 IPR006359 Transcription elongation factor GreA GO:0003677|GO:0032784 GYO_2972 28c86248004010b978ba728f82fcf588 157 Pfam PF03449 Transcription elongation factor, N-terminal 8 77 3.7E-32 T 14-10-2018 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 GYO_2972 28c86248004010b978ba728f82fcf588 157 SUPERFAMILY SSF54534 84 156 2.09E-22 T 14-10-2018 GYO_2972 28c86248004010b978ba728f82fcf588 157 Gene3D G3DSA:3.10.50.30 79 157 4.5E-27 T 14-10-2018 IPR036953 Transcription elongation factor GreA/GreB, C-terminal domain superfamily GO:0003677|GO:0032784 GYO_2972 28c86248004010b978ba728f82fcf588 157 Hamap MF_00105 Transcription elongation factor GreA [greA]. 5 157 34.104 T 14-10-2018 IPR028624 Transcription elongation factor GreA/GreB GO:0003677|GO:0032784|GO:0070063 GYO_2972 28c86248004010b978ba728f82fcf588 157 ProSitePatterns PS00829 Prokaryotic transcription elongation factors signature 1. 20 51 - T 14-10-2018 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 GYO_2972 28c86248004010b978ba728f82fcf588 157 Pfam PF01272 Transcription elongation factor, GreA/GreB, C-term 85 157 4.6E-28 T 14-10-2018 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 GYO_2972 28c86248004010b978ba728f82fcf588 157 ProSitePatterns PS00830 Prokaryotic transcription elongation factors signature 2. 122 138 - T 14-10-2018 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 GYO_2870 03aaecc4ac63e3b7fe85bd58848ffd69 185 Pfam PF01206 Sulfurtransferase TusA 6 75 1.6E-21 T 14-10-2018 IPR001455 TusA-like domain GYO_2870 03aaecc4ac63e3b7fe85bd58848ffd69 185 SMART SM00450 91 185 2.8E-20 T 14-10-2018 IPR001763 Rhodanese-like domain GYO_2870 03aaecc4ac63e3b7fe85bd58848ffd69 185 SUPERFAMILY SSF52821 79 181 1.7E-30 T 14-10-2018 IPR036873 Rhodanese-like domain superfamily GYO_2870 03aaecc4ac63e3b7fe85bd58848ffd69 185 Pfam PF00581 Rhodanese-like domain 93 181 9.7E-16 T 14-10-2018 IPR001763 Rhodanese-like domain GYO_2870 03aaecc4ac63e3b7fe85bd58848ffd69 185 ProSitePatterns PS01148 Uncharacterized protein family UPF0033 signature. 8 32 - T 14-10-2018 IPR001455 TusA-like domain GYO_2870 03aaecc4ac63e3b7fe85bd58848ffd69 185 Gene3D G3DSA:3.40.250.10 88 184 2.8E-27 T 14-10-2018 IPR036873 Rhodanese-like domain superfamily GYO_2870 03aaecc4ac63e3b7fe85bd58848ffd69 185 Gene3D G3DSA:3.30.110.40 1 76 2.6E-28 T 14-10-2018 IPR036868 TusA-like domain superfamily GYO_2870 03aaecc4ac63e3b7fe85bd58848ffd69 185 SUPERFAMILY SSF64307 2 76 6.15E-24 T 14-10-2018 IPR036868 TusA-like domain superfamily GYO_2363 e2ac3a087334cf99a2b7c84d150f9a94 496 Pfam PF00474 Sodium:solute symporter family 40 432 6.0E-21 T 14-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 GYO_2363 e2ac3a087334cf99a2b7c84d150f9a94 496 Gene3D G3DSA:1.20.1730.10 27 478 1.7E-36 T 14-10-2018 IPR038377 Sodium/glucose symporter superfamily GYO_1426 bb6e958546490ef50b0cc42f775df3be 385 TIGRFAM TIGR00707 argD: transaminase, acetylornithine/succinylornithine family 4 377 1.9E-166 T 14-10-2018 IPR004636 Acetylornithine/Succinylornithine transaminase family GO:0006525|GO:0008483 GYO_1426 bb6e958546490ef50b0cc42f775df3be 385 Hamap MF_01107 Acetylornithine/succinyldiaminopimelate aminotransferase [argD]. 3 380 71.411 T 14-10-2018 IPR004636 Acetylornithine/Succinylornithine transaminase family GO:0006525|GO:0008483 GYO_1426 bb6e958546490ef50b0cc42f775df3be 385 Pfam PF00202 Aminotransferase class-III 13 377 1.5E-134 T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 GYO_1426 bb6e958546490ef50b0cc42f775df3be 385 SUPERFAMILY SSF53383 2 377 1.69E-126 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase GYO_1426 bb6e958546490ef50b0cc42f775df3be 385 PIRSF PIRSF000521 157 380 3.3E-37 T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 GYO_1426 bb6e958546490ef50b0cc42f775df3be 385 PIRSF PIRSF000521 106 146 0.055 T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 GYO_1426 bb6e958546490ef50b0cc42f775df3be 385 PIRSF PIRSF000521 5 112 3.7E-7 T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 GYO_1426 bb6e958546490ef50b0cc42f775df3be 385 Gene3D G3DSA:3.40.640.10 47 287 1.1E-138 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 GYO_1426 bb6e958546490ef50b0cc42f775df3be 385 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 205 242 - T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 GYO_1426 bb6e958546490ef50b0cc42f775df3be 385 Gene3D G3DSA:3.90.1150.10 13 367 1.1E-138 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 GYO_2833 75036a529d948b37795642eead6ea21c 186 SMART SM00471 14 141 6.4E-11 T 14-10-2018 IPR003607 HD/PDEase domain GYO_2833 75036a529d948b37795642eead6ea21c 186 TIGRFAM TIGR00488 TIGR00488: putative HD superfamily hydrolase 10 181 1.6E-82 T 14-10-2018 IPR005249 Conserved hypothetical protein CHP00488 GYO_2833 75036a529d948b37795642eead6ea21c 186 SUPERFAMILY SSF109604 3 182 1.07E-36 T 14-10-2018 GYO_2833 75036a529d948b37795642eead6ea21c 186 Gene3D G3DSA:1.10.3210.10 1 184 6.6E-60 T 14-10-2018 GYO_2833 75036a529d948b37795642eead6ea21c 186 Pfam PF01966 HD domain 18 130 1.4E-17 T 14-10-2018 IPR006674 HD domain GYO_3323 38a8b10e251e19805f9efa228bd2a364 82 SUPERFAMILY SSF143800 1 80 6.28E-22 T 14-10-2018 IPR034704 L28p-like Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 GYO_3323 38a8b10e251e19805f9efa228bd2a364 82 Hamap MF_00502 50S ribosomal protein L31 type B [rpmE2]. 1 81 23.238 T 14-10-2018 IPR027493 Ribosomal protein L31 type B GO:0003735|GO:0005622|GO:0005840|GO:0006412 GYO_3323 38a8b10e251e19805f9efa228bd2a364 82 PRINTS PR01249 Ribosomal protein L31 signature 45 60 6.9E-17 T 14-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 GYO_3323 38a8b10e251e19805f9efa228bd2a364 82 PRINTS PR01249 Ribosomal protein L31 signature 60 78 6.9E-17 T 14-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 GYO_3323 38a8b10e251e19805f9efa228bd2a364 82 PRINTS PR01249 Ribosomal protein L31 signature 2 19 6.9E-17 T 14-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 GYO_3323 38a8b10e251e19805f9efa228bd2a364 82 TIGRFAM TIGR00105 L31: ribosomal protein bL31 1 80 2.6E-17 T 14-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 GYO_3323 38a8b10e251e19805f9efa228bd2a364 82 ProSitePatterns PS01143 Ribosomal protein L31 signature. 49 70 - T 14-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 GYO_3323 38a8b10e251e19805f9efa228bd2a364 82 Pfam PF01197 Ribosomal protein L31 1 79 1.1E-25 T 14-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 GYO_3323 38a8b10e251e19805f9efa228bd2a364 82 Gene3D G3DSA:2.30.170.50 1 82 1.1E-22 T 14-10-2018 GYO_4205 248b12bab2d0b83b92f7e348aa06e0a5 87 Pfam PF17368 Spore morphogenesis and germination protein YwcE 2 85 3.0E-40 T 14-10-2018 IPR020185 Spore morphogenesis/germination protein YwcE GYO_4205 248b12bab2d0b83b92f7e348aa06e0a5 87 ProDom PD062384 GERMINATION SPORE TRANSMEMBRANE MEMBRANE MORPHOGENESIS YWCE 2 86 2.0E-42 T 14-10-2018 IPR020185 Spore morphogenesis/germination protein YwcE GYO_2328 ba884cfd0af3e02a96b5e32d2d90bf2f 163 SUPERFAMILY SSF109635 3 85 7.45E-13 T 14-10-2018 IPR037187 DksA, N-terminal domain superfamily GYO_2328 ba884cfd0af3e02a96b5e32d2d90bf2f 163 Gene3D G3DSA:1.20.120.910 1 125 9.5E-29 T 14-10-2018 GYO_2328 ba884cfd0af3e02a96b5e32d2d90bf2f 163 Pfam PF01258 Prokaryotic dksA/traR C4-type zinc finger 84 118 2.7E-10 T 14-10-2018 IPR000962 Zinc finger, DksA/TraR C4-type GO:0008270 GYO_2328 ba884cfd0af3e02a96b5e32d2d90bf2f 163 ProSitePatterns PS01102 Prokaryotic dksA C4-type zinc finger. 89 113 - T 14-10-2018 IPR020458 Zinc finger, DksA/TraR C4-type conserved site GYO_2328 ba884cfd0af3e02a96b5e32d2d90bf2f 163 SUPERFAMILY SSF57716 86 118 1.43E-6 T 14-10-2018 GYO_2618 fefa5c067153269d969b52fd9b90264b 128 Pfam PF13669 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 2 112 2.4E-8 T 14-10-2018 GYO_2618 fefa5c067153269d969b52fd9b90264b 128 Gene3D G3DSA:3.10.180.10 1 126 4.0E-34 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase GYO_2618 fefa5c067153269d969b52fd9b90264b 128 SUPERFAMILY SSF54593 1 127 4.13E-19 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase GYO_2781 7a16b899a0719266222ad5bd8c9c2370 373 SUPERFAMILY SSF102705 6 372 1.31E-132 T 14-10-2018 IPR036069 GTP cyclohydrolase 1 type 2/Nif3 superfamily GYO_2781 7a16b899a0719266222ad5bd8c9c2370 373 Pfam PF01784 NIF3 (NGG1p interacting factor 3) 9 351 1.2E-79 T 14-10-2018 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 GYO_2781 7a16b899a0719266222ad5bd8c9c2370 373 Gene3D G3DSA:3.40.1390.30 4 128 2.6E-40 T 14-10-2018 GYO_2781 7a16b899a0719266222ad5bd8c9c2370 373 TIGRFAM TIGR00486 YbgI_SA1388: dinuclear metal center protein, YbgI/SA1388 family 5 369 8.9E-119 T 14-10-2018 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 GYO_2781 7a16b899a0719266222ad5bd8c9c2370 373 PIRSF PIRSF037489 3 373 7.9E-160 T 14-10-2018 IPR017221 GTP cyclohydrolase 1 type 2//Nif3, bacteria GYO_2781 7a16b899a0719266222ad5bd8c9c2370 373 Gene3D G3DSA:3.30.70.120 133 241 3.0E-42 T 14-10-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal GYO_4347 bf083eb7764abec3e97376e9736d1810 433 SUPERFAMILY SSF54680 331 431 1.19E-29 T 14-10-2018 IPR036566 Pyrimidine nucleoside phosphorylase-like, C-terminal domain superfamily GO:0006213|GO:0016763 Reactome: R-HSA-73614|Reactome: R-HSA-73621 GYO_4347 bf083eb7764abec3e97376e9736d1810 433 ProSitePatterns PS00647 Thymidine and pyrimidine-nucleoside phosphorylases signature. 110 125 - T 14-10-2018 IPR017872 Pyrimidine-nucleoside phosphorylase, conserved site GO:0006206 Reactome: R-HSA-73614|Reactome: R-HSA-73621 GYO_4347 bf083eb7764abec3e97376e9736d1810 433 TIGRFAM TIGR02644 Y_phosphoryl: pyrimidine-nucleoside phosphorylase 3 417 2.0E-183 T 14-10-2018 IPR018090 Pyrimidine-nucleoside phosphorylase, bacterial/eukaryotic GO:0006213|GO:0016154 KEGG: 00240+2.4.2.4|KEGG: 00983+2.4.2.4|MetaCyc: PWY-7181|Reactome: R-HSA-73614|Reactome: R-HSA-73621 GYO_4347 bf083eb7764abec3e97376e9736d1810 433 Gene3D G3DSA:3.40.1030.10 69 335 3.8E-120 T 14-10-2018 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 GYO_4347 bf083eb7764abec3e97376e9736d1810 433 Pfam PF02885 Glycosyl transferase family, helical bundle domain 4 66 5.4E-21 T 14-10-2018 IPR017459 Glycosyl transferase family 3, N-terminal domain Reactome: R-HSA-73614|Reactome: R-HSA-73621 GYO_4347 bf083eb7764abec3e97376e9736d1810 433 Pfam PF00591 Glycosyl transferase family, a/b domain 78 306 6.9E-52 T 14-10-2018 IPR000312 Glycosyl transferase, family 3 GO:0016757 Reactome: R-HSA-73614|Reactome: R-HSA-73621 GYO_4347 bf083eb7764abec3e97376e9736d1810 433 Pfam PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain 345 418 1.9E-28 T 14-10-2018 IPR013102 Pyrimidine nucleoside phosphorylase, C-terminal GO:0006213|GO:0016763 Reactome: R-HSA-73614|Reactome: R-HSA-73621 GYO_4347 bf083eb7764abec3e97376e9736d1810 433 Gene3D G3DSA:1.20.970.10 1 67 1.7E-29 T 14-10-2018 GYO_4347 bf083eb7764abec3e97376e9736d1810 433 SMART SM00941 345 418 1.7E-33 T 14-10-2018 IPR013102 Pyrimidine nucleoside phosphorylase, C-terminal GO:0006213|GO:0016763 Reactome: R-HSA-73614|Reactome: R-HSA-73621 GYO_4347 bf083eb7764abec3e97376e9736d1810 433 SUPERFAMILY SSF47648 1 69 1.96E-21 T 14-10-2018 IPR036320 Glycosyl transferase family 3, N-terminal domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 GYO_4347 bf083eb7764abec3e97376e9736d1810 433 SUPERFAMILY SSF52418 69 329 2.49E-93 T 14-10-2018 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 GYO_4347 bf083eb7764abec3e97376e9736d1810 433 PIRSF PIRSF000478 1 433 2.1E-173 T 14-10-2018 IPR000053 Thymidine/pyrimidine-nucleoside phosphorylase GO:0004645|GO:0006206 Reactome: R-HSA-73614|Reactome: R-HSA-73621 GYO_4347 bf083eb7764abec3e97376e9736d1810 433 Gene3D G3DSA:3.90.1170.30 336 423 1.9E-36 T 14-10-2018 IPR036566 Pyrimidine nucleoside phosphorylase-like, C-terminal domain superfamily GO:0006213|GO:0016763 Reactome: R-HSA-73614|Reactome: R-HSA-73621 GYO_1201 9bb01c3f6d38877b759afd2682377a98 463 PRINTS PR00173 Glutamate-aspartate symporter signature 28 48 1.9E-17 T 14-10-2018 GYO_1201 9bb01c3f6d38877b759afd2682377a98 463 PRINTS PR00173 Glutamate-aspartate symporter signature 106 131 1.9E-17 T 14-10-2018 GYO_1201 9bb01c3f6d38877b759afd2682377a98 463 PRINTS PR00173 Glutamate-aspartate symporter signature 369 388 1.9E-17 T 14-10-2018 GYO_1201 9bb01c3f6d38877b759afd2682377a98 463 PRINTS PR00173 Glutamate-aspartate symporter signature 396 416 1.9E-17 T 14-10-2018 GYO_1201 9bb01c3f6d38877b759afd2682377a98 463 PRINTS PR00173 Glutamate-aspartate symporter signature 233 252 1.9E-17 T 14-10-2018 GYO_1201 9bb01c3f6d38877b759afd2682377a98 463 PRINTS PR00173 Glutamate-aspartate symporter signature 76 96 1.9E-17 T 14-10-2018 GYO_1201 9bb01c3f6d38877b759afd2682377a98 463 SUPERFAMILY SSF118215 30 441 2.09E-91 T 14-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 GYO_1201 9bb01c3f6d38877b759afd2682377a98 463 Gene3D G3DSA:1.10.3860.10 20 456 4.6E-97 T 14-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 GYO_1201 9bb01c3f6d38877b759afd2682377a98 463 Pfam PF00375 Sodium:dicarboxylate symporter family 32 441 1.7E-96 T 14-10-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 GYO_0690 51d8c893ba2dd751351d847ecb6b17f2 133 Gene3D G3DSA:3.30.565.10 6 130 1.2E-17 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily GYO_0690 51d8c893ba2dd751351d847ecb6b17f2 133 SMART SM00387 34 133 0.0046 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase GYO_0690 51d8c893ba2dd751351d847ecb6b17f2 133 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 35 127 4.5E-8 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase GYO_0690 51d8c893ba2dd751351d847ecb6b17f2 133 SUPERFAMILY SSF55874 21 127 7.99E-15 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily GYO_4013 8cd1fe5accd7a0f044ac87b17f56bbd2 189 PRINTS PR01398 Isochorismatase signature 164 181 4.7E-6 T 14-10-2018 IPR016291 Isochorismatase GO:0008908 GYO_4013 8cd1fe5accd7a0f044ac87b17f56bbd2 189 PRINTS PR01398 Isochorismatase signature 90 112 4.7E-6 T 14-10-2018 IPR016291 Isochorismatase GO:0008908 GYO_4013 8cd1fe5accd7a0f044ac87b17f56bbd2 189 PRINTS PR01398 Isochorismatase signature 146 164 4.7E-6 T 14-10-2018 IPR016291 Isochorismatase GO:0008908 GYO_4013 8cd1fe5accd7a0f044ac87b17f56bbd2 189 Pfam PF00857 Isochorismatase family 12 182 4.6E-42 T 14-10-2018 IPR000868 Isochorismatase-like GO:0003824 GYO_4013 8cd1fe5accd7a0f044ac87b17f56bbd2 189 Gene3D G3DSA:3.40.50.850 1 185 1.1E-52 T 14-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 GYO_4013 8cd1fe5accd7a0f044ac87b17f56bbd2 189 SUPERFAMILY SSF52499 6 188 4.58E-52 T 14-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 GYO_2931 f739547c3952471894d3c21cd20956fd 65 SMART SM00342 1 57 0.0024 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 GYO_2931 f739547c3952471894d3c21cd20956fd 65 SUPERFAMILY SSF46689 10 60 7.17E-10 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 GYO_2931 f739547c3952471894d3c21cd20956fd 65 Gene3D G3DSA:1.10.10.60 1 62 4.5E-15 T 14-10-2018 GYO_2931 f739547c3952471894d3c21cd20956fd 65 Pfam PF12833 Helix-turn-helix domain 1 55 5.3E-14 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 GYO_2194 1985a85313a2e5bdc2a4ab4e2a187be8 549 Gene3D G3DSA:3.30.300.310 441 543 1.1E-30 T 14-10-2018 GYO_2194 1985a85313a2e5bdc2a4ab4e2a187be8 549 SUPERFAMILY SSF56801 5 540 1.11E-159 T 14-10-2018 GYO_2194 1985a85313a2e5bdc2a4ab4e2a187be8 549 Gene3D G3DSA:3.40.50.980 34 353 3.6E-123 T 14-10-2018 GYO_2194 1985a85313a2e5bdc2a4ab4e2a187be8 549 Gene3D G3DSA:3.40.50.980 37 211 3.6E-123 T 14-10-2018 GYO_2194 1985a85313a2e5bdc2a4ab4e2a187be8 549 Pfam PF00501 AMP-binding enzyme 14 445 4.3E-113 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 GYO_2194 1985a85313a2e5bdc2a4ab4e2a187be8 549 Gene3D G3DSA:2.30.38.10 354 438 3.6E-123 T 14-10-2018 GYO_2194 1985a85313a2e5bdc2a4ab4e2a187be8 549 ProSitePatterns PS00455 Putative AMP-binding domain signature. 195 206 - T 14-10-2018 IPR020845 AMP-binding, conserved site GYO_2194 1985a85313a2e5bdc2a4ab4e2a187be8 549 Pfam PF13193 AMP-binding enzyme C-terminal domain 454 529 1.5E-16 T 14-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain GYO_4290 f035cc0318eccad17b326df66034b80b 339 SUPERFAMILY SSF51735 1 336 1.82E-103 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily GYO_4290 f035cc0318eccad17b326df66034b80b 339 Gene3D G3DSA:3.40.50.720 3 273 2.6E-151 T 14-10-2018 GYO_4290 f035cc0318eccad17b326df66034b80b 339 Pfam PF16363 GDP-mannose 4,6 dehydratase 4 323 1.1E-65 T 14-10-2018 IPR016040 NAD(P)-binding domain GYO_4290 f035cc0318eccad17b326df66034b80b 339 Gene3D G3DSA:3.90.25.10 193 328 2.6E-151 T 14-10-2018 GYO_4290 f035cc0318eccad17b326df66034b80b 339 PRINTS PR01713 Nucleotide sugar epimerase signature 255 270 6.5E-5 T 14-10-2018 GYO_4290 f035cc0318eccad17b326df66034b80b 339 PRINTS PR01713 Nucleotide sugar epimerase signature 294 311 6.5E-5 T 14-10-2018 GYO_4290 f035cc0318eccad17b326df66034b80b 339 PRINTS PR01713 Nucleotide sugar epimerase signature 230 245 6.5E-5 T 14-10-2018 GYO_4290 f035cc0318eccad17b326df66034b80b 339 TIGRFAM TIGR01179 galE: UDP-glucose 4-epimerase GalE 2 334 9.1E-154 T 14-10-2018 IPR005886 UDP-glucose 4-epimerase GO:0003978|GO:0006012 KEGG: 00052+5.1.3.2|KEGG: 00520+5.1.3.2|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6397|MetaCyc: PWY-6527|MetaCyc: PWY-7328|MetaCyc: PWY-7344|Reactome: R-HSA-5609977|Reactome: R-HSA-70370 GYO_3823 7fa4bedcaf0a1fa881b73e80db8258c3 207 TIGRFAM TIGR03188 histidine_hisI: phosphoribosyl-ATP diphosphatase 118 200 3.2E-32 T 14-10-2018 IPR008179 Phosphoribosyl-ATP pyrophosphohydrolase GO:0000105|GO:0004636 KEGG: 00340+3.6.1.31 GYO_3823 7fa4bedcaf0a1fa881b73e80db8258c3 207 Hamap MF_01021 Phosphoribosyl-AMP cyclohydrolase [hisI]. 3 106 29.739 T 14-10-2018 IPR026660 Phosphoribosyl-AMP cyclohydrolase GO:0000105|GO:0004635 KEGG: 00340+3.5.4.19 GYO_3823 7fa4bedcaf0a1fa881b73e80db8258c3 207 SUPERFAMILY SSF101386 115 204 1.03E-27 T 14-10-2018 GYO_3823 7fa4bedcaf0a1fa881b73e80db8258c3 207 Pfam PF01502 Phosphoribosyl-AMP cyclohydrolase 30 102 2.0E-34 T 14-10-2018 IPR002496 Phosphoribosyl-AMP cyclohydrolase domain GO:0000105|GO:0004635 KEGG: 00340+3.5.4.19 GYO_3823 7fa4bedcaf0a1fa881b73e80db8258c3 207 Gene3D G3DSA:3.10.20.400 1 93 1.4E-40 T 14-10-2018 IPR038019 Phosphoribosyl-AMP cyclohydrolase domain superfamily KEGG: 00340+3.5.4.19 GYO_3823 7fa4bedcaf0a1fa881b73e80db8258c3 207 Gene3D G3DSA:1.10.287.1080 113 206 1.4E-33 T 14-10-2018 GYO_3823 7fa4bedcaf0a1fa881b73e80db8258c3 207 ProDom PD002610 PHOSPHORIBOSYL-AMP BIOSYNTHESIS CYCLOHYDROLASE HYDROLASE HISTIDINE AMINO-ACID PRA-CH PHOSPHORIBOSYL-ATP BIFUNCTIONAL INCLUDES: 52 101 1.0E-24 T 14-10-2018 IPR002496 Phosphoribosyl-AMP cyclohydrolase domain GO:0000105|GO:0004635 KEGG: 00340+3.5.4.19 GYO_3823 7fa4bedcaf0a1fa881b73e80db8258c3 207 Hamap MF_01020 Phosphoribosyl-ATP pyrophosphatase [hisE]. 114 200 21.237 T 14-10-2018 IPR008179 Phosphoribosyl-ATP pyrophosphohydrolase GO:0000105|GO:0004636 KEGG: 00340+3.6.1.31 GYO_3823 7fa4bedcaf0a1fa881b73e80db8258c3 207 Hamap MF_01019 Histidine biosynthesis bifunctional protein HisIE [hisI]. 5 205 39.033 T 14-10-2018 IPR023019 Histidine biosynthesis bifunctional protein HisIE GO:0000105|GO:0004635|GO:0004636 KEGG: 00340+3.6.1.31+3.5.4.19 GYO_3823 7fa4bedcaf0a1fa881b73e80db8258c3 207 SUPERFAMILY SSF141734 4 107 5.23E-48 T 14-10-2018 IPR038019 Phosphoribosyl-AMP cyclohydrolase domain superfamily KEGG: 00340+3.5.4.19 GYO_3823 7fa4bedcaf0a1fa881b73e80db8258c3 207 Pfam PF01503 Phosphoribosyl-ATP pyrophosphohydrolase 118 204 2.3E-19 T 14-10-2018 IPR021130 Phosphoribosyl-ATP pyrophosphohydrolase-like KEGG: 00340+3.6.1.31 GYO_0063 5fca8f104bf1c05e706b372222e2a8e5 205 Gene3D G3DSA:2.170.120.20 94 167 1.7E-26 T 14-10-2018 IPR037121 Ribosomal protein L25, C-terminal GYO_0063 5fca8f104bf1c05e706b372222e2a8e5 205 Gene3D G3DSA:2.40.240.10 1 93 1.7E-25 T 14-10-2018 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, N-terminal Reactome: R-HSA-2408517|Reactome: R-HSA-379716 GYO_0063 5fca8f104bf1c05e706b372222e2a8e5 205 Hamap MF_01334 50S ribosomal protein L25 [rplY]. 2 179 26.389 T 14-10-2018 IPR001021 Ribosomal protein L25, long-form GO:0003735|GO:0005840|GO:0006412|GO:0008097 GYO_0063 5fca8f104bf1c05e706b372222e2a8e5 205 ProDom PD012503 RIBOSOMAL L25 50S RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN STRESS GENERAL CTC RRNA 4 91 3.0E-44 T 14-10-2018 IPR029751 Ribosomal protein L25 GO:0003735|GO:0005840|GO:0006412|GO:0008097 GYO_0063 5fca8f104bf1c05e706b372222e2a8e5 205 TIGRFAM TIGR00731 bL25_bact_ctc: ribosomal protein bL25, Ctc-form 4 178 3.8E-68 T 14-10-2018 IPR001021 Ribosomal protein L25, long-form GO:0003735|GO:0005840|GO:0006412|GO:0008097 GYO_0063 5fca8f104bf1c05e706b372222e2a8e5 205 Pfam PF01386 Ribosomal L25p family 4 90 2.0E-21 T 14-10-2018 IPR029751 Ribosomal protein L25 GO:0003735|GO:0005840|GO:0006412|GO:0008097 GYO_0063 5fca8f104bf1c05e706b372222e2a8e5 205 SUPERFAMILY SSF50715 2 186 3.66E-54 T 14-10-2018 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain superfamily GO:0006412 Reactome: R-HSA-2408517|Reactome: R-HSA-379716 GYO_0063 5fca8f104bf1c05e706b372222e2a8e5 205 Pfam PF14693 Ribosomal protein TL5, C-terminal domain 99 181 7.6E-25 T 14-10-2018 IPR020057 Ribosomal protein L25, beta domain GYO_0908 1313193d0b827f08a0b8a2e577212455 742 SUPERFAMILY SSF55326 402 569 8.11E-58 T 14-10-2018 IPR036921 PurM-like, N-terminal domain superfamily GYO_0908 1313193d0b827f08a0b8a2e577212455 742 Hamap MF_00420 Phosphoribosylformylglycinamidine synthase subunit PurL [purL]. 1 742 328.216 T 14-10-2018 IPR010074 Phosphoribosylformylglycinamidine subunit PurL GO:0004642|GO:0005737|GO:0006189 KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277 GYO_0908 1313193d0b827f08a0b8a2e577212455 742 Pfam PF00586 AIR synthase related protein, N-terminal domain 89 194 2.1E-25 T 14-10-2018 IPR016188 PurM-like, N-terminal domain GYO_0908 1313193d0b827f08a0b8a2e577212455 742 Pfam PF00586 AIR synthase related protein, N-terminal domain 445 562 5.9E-25 T 14-10-2018 IPR016188 PurM-like, N-terminal domain GYO_0908 1313193d0b827f08a0b8a2e577212455 742 Gene3D G3DSA:3.90.650.10 34 362 2.2E-135 T 14-10-2018 IPR036676 PurM-like, C-terminal domain superfamily GYO_0908 1313193d0b827f08a0b8a2e577212455 742 SUPERFAMILY SSF56042 572 738 3.89E-36 T 14-10-2018 IPR036676 PurM-like, C-terminal domain superfamily GYO_0908 1313193d0b827f08a0b8a2e577212455 742 TIGRFAM TIGR01736 FGAM_synth_II: phosphoribosylformylglycinamidine synthase II 24 737 0.0 T 14-10-2018 IPR010074 Phosphoribosylformylglycinamidine subunit PurL GO:0004642|GO:0005737|GO:0006189 KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277 GYO_0908 1313193d0b827f08a0b8a2e577212455 742 SUPERFAMILY SSF55326 18 201 9.57E-52 T 14-10-2018 IPR036921 PurM-like, N-terminal domain superfamily GYO_0908 1313193d0b827f08a0b8a2e577212455 742 Gene3D G3DSA:3.30.1330.10 392 566 2.6E-62 T 14-10-2018 IPR036921 PurM-like, N-terminal domain superfamily GYO_0908 1313193d0b827f08a0b8a2e577212455 742 SUPERFAMILY SSF56042 204 430 3.14E-56 T 14-10-2018 IPR036676 PurM-like, C-terminal domain superfamily GYO_0908 1313193d0b827f08a0b8a2e577212455 742 PIRSF PIRSF001587 8 741 0.0 T 14-10-2018 IPR010074 Phosphoribosylformylglycinamidine subunit PurL GO:0004642|GO:0005737|GO:0006189 KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277 GYO_0908 1313193d0b827f08a0b8a2e577212455 742 Gene3D G3DSA:3.30.1330.10 49 197 2.2E-135 T 14-10-2018 IPR036921 PurM-like, N-terminal domain superfamily GYO_0908 1313193d0b827f08a0b8a2e577212455 742 Pfam PF02769 AIR synthase related protein, C-terminal domain 575 706 2.2E-12 T 14-10-2018 IPR010918 PurM-like, C-terminal domain GYO_0908 1313193d0b827f08a0b8a2e577212455 742 Pfam PF02769 AIR synthase related protein, C-terminal domain 207 360 4.2E-32 T 14-10-2018 IPR010918 PurM-like, C-terminal domain GYO_0908 1313193d0b827f08a0b8a2e577212455 742 Gene3D G3DSA:3.90.650.10 569 740 3.2E-37 T 14-10-2018 IPR036676 PurM-like, C-terminal domain superfamily GYO_1948 4031aa9bb955864356b30630d6889200 446 SMART SM00962 101 297 4.1E-122 T 14-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 GYO_1948 4031aa9bb955864356b30630d6889200 446 Gene3D G3DSA:3.40.50.300 91 286 1.6E-130 T 14-10-2018 GYO_1948 4031aa9bb955864356b30630d6889200 446 SMART SM00382 100 302 6.3E-11 T 14-10-2018 IPR003593 AAA+ ATPase domain GYO_1948 4031aa9bb955864356b30630d6889200 446 Pfam PF02881 SRP54-type protein, helical bundle domain 6 83 2.3E-22 T 14-10-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 GYO_1948 4031aa9bb955864356b30630d6889200 446 SUPERFAMILY SSF52540 43 355 3.28E-60 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase GYO_1948 4031aa9bb955864356b30630d6889200 446 TIGRFAM TIGR00959 ffh: signal recognition particle protein 3 429 1.1E-191 T 14-10-2018 IPR004780 Signal recognition particle protein Ffh GO:0003924|GO:0005525|GO:0006614|GO:0048500 GYO_1948 4031aa9bb955864356b30630d6889200 446 ProSitePatterns PS00300 SRP54-type proteins GTP-binding domain signature. 270 283 - T 14-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 GYO_1948 4031aa9bb955864356b30630d6889200 446 Gene3D G3DSA:1.20.120.140 6 307 1.6E-130 T 14-10-2018 GYO_1948 4031aa9bb955864356b30630d6889200 446 Gene3D G3DSA:1.10.260.30 328 444 1.3E-44 T 14-10-2018 IPR036891 Signal recognition particle, SRP54 subunit, M-domain superfamily GO:0006614|GO:0008312|GO:0048500 Reactome: R-HSA-1799339 GYO_1948 4031aa9bb955864356b30630d6889200 446 SMART SM00963 2 87 2.8E-34 T 14-10-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 GYO_1948 4031aa9bb955864356b30630d6889200 446 SUPERFAMILY SSF47446 329 430 4.25E-39 T 14-10-2018 IPR036891 Signal recognition particle, SRP54 subunit, M-domain superfamily GO:0006614|GO:0008312|GO:0048500 Reactome: R-HSA-1799339 GYO_1948 4031aa9bb955864356b30630d6889200 446 Hamap MF_00306 Signal recognition particle 54 kDa protein [srp54]. 6 434 35.974 T 14-10-2018 IPR022941 Signal recognition particle, SRP54 subunit GO:0003924|GO:0005525|GO:0006614|GO:0048500 Reactome: R-HSA-1799339 GYO_1948 4031aa9bb955864356b30630d6889200 446 Pfam PF00448 SRP54-type protein, GTPase domain 101 297 1.1E-79 T 14-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 GYO_1948 4031aa9bb955864356b30630d6889200 446 Pfam PF02978 Signal peptide binding domain 329 427 2.4E-34 T 14-10-2018 IPR004125 Signal recognition particle, SRP54 subunit, M-domain GO:0006614|GO:0008312|GO:0048500 Reactome: R-HSA-1799339 GYO_0254 8f37baf62c294dac689878a548165038 570 Pfam PF04740 LXG domain of WXG superfamily 2 201 5.0E-51 T 14-10-2018 IPR006829 LXG domain GYO_0254 8f37baf62c294dac689878a548165038 570 Pfam PF14449 Pre-toxin TG 255 320 2.4E-20 T 14-10-2018 IPR027797 Pre-toxin TG domain GYO_0333 8f37baf62c294dac689878a548165038 570 Pfam PF04740 LXG domain of WXG superfamily 2 201 5.0E-51 T 14-10-2018 IPR006829 LXG domain GYO_0333 8f37baf62c294dac689878a548165038 570 Pfam PF14449 Pre-toxin TG 255 320 2.4E-20 T 14-10-2018 IPR027797 Pre-toxin TG domain GYO_2377 a25167fca71a70e01f7141dd3d035e85 471 TIGRFAM TIGR00238 TIGR00238: KamA family protein 13 342 1.4E-159 T 14-10-2018 IPR003739 Lysine-2,3-aminomutase/glutamate 2,3-aminomutase GYO_2377 a25167fca71a70e01f7141dd3d035e85 471 Pfam PF12544 Lysine-2,3-aminomutase 321 447 2.3E-62 T 14-10-2018 IPR025895 Lysine-2,3-aminomutase, C-terminal domain GYO_2377 a25167fca71a70e01f7141dd3d035e85 471 Gene3D G3DSA:2.40.50.600 349 414 4.5E-18 T 14-10-2018 GYO_2377 a25167fca71a70e01f7141dd3d035e85 471 SUPERFAMILY SSF102114 114 358 1.02E-33 T 14-10-2018 GYO_2377 a25167fca71a70e01f7141dd3d035e85 471 Gene3D G3DSA:3.20.20.70 63 348 2.4E-118 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 GYO_2377 a25167fca71a70e01f7141dd3d035e85 471 TIGRFAM TIGR03820 lys_2_3_AblA: lysine-2,3-aminomutase 23 427 1.2E-191 T 14-10-2018 IPR022459 Lysine-2,3-aminomutase KEGG: 00310+5.4.3.2 GYO_2377 a25167fca71a70e01f7141dd3d035e85 471 PIRSF PIRSF004911 3 398 9.1E-160 T 14-10-2018 IPR003739 Lysine-2,3-aminomutase/glutamate 2,3-aminomutase GYO_0404 eb43812b5c9776c3c59dc08d5d56dea7 444 PIRSF PIRSF002808 5 444 1.5E-177 T 14-10-2018 IPR000849 Sugar phosphate transporter GO:0016021|GO:0022857|GO:0055085 GYO_0404 eb43812b5c9776c3c59dc08d5d56dea7 444 Gene3D G3DSA:1.20.1250.20 18 226 1.7E-57 T 14-10-2018 GYO_0404 eb43812b5c9776c3c59dc08d5d56dea7 444 SUPERFAMILY SSF103473 9 436 3.14E-82 T 14-10-2018 IPR036259 MFS transporter superfamily GYO_0404 eb43812b5c9776c3c59dc08d5d56dea7 444 ProSitePatterns PS00942 glpT family of transporters signature. 153 169 - T 14-10-2018 IPR021159 Glycerate/sugar phosphate transporter, conserved site Reactome: R-HSA-3229133|Reactome: R-HSA-70263 GYO_0404 eb43812b5c9776c3c59dc08d5d56dea7 444 Gene3D G3DSA:1.20.1250.20 240 442 1.2E-56 T 14-10-2018 GYO_0404 eb43812b5c9776c3c59dc08d5d56dea7 444 Pfam PF07690 Major Facilitator Superfamily 34 399 2.2E-52 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 GYO_0404 eb43812b5c9776c3c59dc08d5d56dea7 444 TIGRFAM TIGR00881 2A0104: phosphoglycerate transporter family protein 35 417 1.4E-169 T 14-10-2018 GYO_0404 eb43812b5c9776c3c59dc08d5d56dea7 444 TIGRFAM TIGR00712 glpT: glycerol-3-phosphate transporter 1 440 1.0E-262 T 14-10-2018 IPR005267 Glycerol-3-phosphate transporter GO:0015169|GO:0015794|GO:0016021 GYO_0228 160623e0de88ccdac13180c3eb5bea07 311 SUPERFAMILY SSF56563 19 307 3.66E-9 T 14-10-2018 GYO_0228 160623e0de88ccdac13180c3eb5bea07 311 Pfam PF05065 Phage capsid family 20 306 8.1E-26 T 14-10-2018 IPR024455 Phage capsid GYO_0307 160623e0de88ccdac13180c3eb5bea07 311 SUPERFAMILY SSF56563 19 307 3.66E-9 T 14-10-2018 GYO_0307 160623e0de88ccdac13180c3eb5bea07 311 Pfam PF05065 Phage capsid family 20 306 8.1E-26 T 14-10-2018 IPR024455 Phage capsid GYO_0470 8bac368f0135e5d094fd2b12936cbc8d 378 SUPERFAMILY SSF53774 53 377 3.14E-102 T 14-10-2018 IPR036152 Asparaginase/glutaminase-like superfamily Reactome: R-HSA-70614 GYO_0470 8bac368f0135e5d094fd2b12936cbc8d 378 SMART SM00870 55 372 2.6E-138 T 14-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 GYO_0470 8bac368f0135e5d094fd2b12936cbc8d 378 TIGRFAM TIGR00520 asnASE_II: L-asparaginase, type II 33 378 3.3E-160 T 14-10-2018 IPR004550 L-asparaginase, type II GO:0004067|GO:0006528 GYO_0470 8bac368f0135e5d094fd2b12936cbc8d 378 ProSitePatterns PS00917 Asparaginase / glutaminase active site signature 2. 137 147 - T 14-10-2018 IPR027475 Asparaginase/glutaminase, active site 2 Reactome: R-HSA-70614 GYO_0470 8bac368f0135e5d094fd2b12936cbc8d 378 Gene3D G3DSA:3.40.50.40 267 378 1.6E-39 T 14-10-2018 IPR027473 L-asparaginase, C-terminal Reactome: R-HSA-70614 GYO_0470 8bac368f0135e5d094fd2b12936cbc8d 378 PIRSF PIRSF500176 52 378 1.4E-74 T 14-10-2018 GYO_0470 8bac368f0135e5d094fd2b12936cbc8d 378 Pfam PF00710 Asparaginase, N-terminal 55 246 1.6E-59 T 14-10-2018 IPR027474 L-asparaginase, N-terminal Reactome: R-HSA-70614 GYO_0470 8bac368f0135e5d094fd2b12936cbc8d 378 Gene3D G3DSA:3.40.50.1170 50 266 2.2E-84 T 14-10-2018 IPR037152 L-asparaginase, N-terminal domain superfamily Reactome: R-HSA-70614 GYO_0470 8bac368f0135e5d094fd2b12936cbc8d 378 PIRSF PIRSF001220 50 378 5.0E-88 T 14-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 GYO_0470 8bac368f0135e5d094fd2b12936cbc8d 378 ProSitePatterns PS00144 Asparaginase / glutaminase active site signature 1. 58 66 - T 14-10-2018 IPR020827 Asparaginase/glutaminase, active site 1 GO:0006520 GYO_0470 8bac368f0135e5d094fd2b12936cbc8d 378 PRINTS PR00139 Asparaginase/glutaminase family signature 314 332 1.7E-24 T 14-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 GYO_0470 8bac368f0135e5d094fd2b12936cbc8d 378 PRINTS PR00139 Asparaginase/glutaminase family signature 56 67 1.7E-24 T 14-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 GYO_0470 8bac368f0135e5d094fd2b12936cbc8d 378 PRINTS PR00139 Asparaginase/glutaminase family signature 136 154 1.7E-24 T 14-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 GYO_1981 e1ca576282b4351554fcbf32730c3406 487 Pfam PF02120 Flagellar hook-length control protein FliK 368 442 2.0E-17 T 14-10-2018 IPR021136 Flagellar hook-length control protein-like, C-terminal GYO_1981 e1ca576282b4351554fcbf32730c3406 487 PRINTS PR01007 Flagellar hook-length control protein signature 131 148 7.3E-6 T 14-10-2018 IPR001635 Flagellar hook-length control protein FliK GO:0009424|GO:0044780 GYO_1981 e1ca576282b4351554fcbf32730c3406 487 PRINTS PR01007 Flagellar hook-length control protein signature 376 394 7.3E-6 T 14-10-2018 IPR001635 Flagellar hook-length control protein FliK GO:0009424|GO:0044780 GYO_1981 e1ca576282b4351554fcbf32730c3406 487 PRINTS PR01007 Flagellar hook-length control protein signature 409 432 7.3E-6 T 14-10-2018 IPR001635 Flagellar hook-length control protein FliK GO:0009424|GO:0044780 GYO_1981 e1ca576282b4351554fcbf32730c3406 487 Gene3D G3DSA:3.30.750.140 344 469 1.7E-10 T 14-10-2018 IPR038610 FliK-like, C-terminal domain superfamily GYO_1059 1b9829dadd1c9e6f09467d101fa9d2d0 351 Pfam PF01699 Sodium/calcium exchanger protein 26 178 1.5E-20 T 14-10-2018 IPR004837 Sodium/calcium exchanger membrane region GO:0016021|GO:0055085 Reactome: R-HSA-425561 GYO_1059 1b9829dadd1c9e6f09467d101fa9d2d0 351 Pfam PF01699 Sodium/calcium exchanger protein 206 346 9.1E-18 T 14-10-2018 IPR004837 Sodium/calcium exchanger membrane region GO:0016021|GO:0055085 Reactome: R-HSA-425561 GYO_1059 1b9829dadd1c9e6f09467d101fa9d2d0 351 Gene3D G3DSA:1.20.1420.30 59 342 4.6E-26 T 14-10-2018 GYO_1059 1b9829dadd1c9e6f09467d101fa9d2d0 351 Gene3D G3DSA:1.20.58.1130 196 238 4.6E-26 T 14-10-2018 GYO_1059 1b9829dadd1c9e6f09467d101fa9d2d0 351 TIGRFAM TIGR00378 cax: calcium/proton exchanger 9 349 2.3E-166 T 14-10-2018 IPR004798 Calcium/proton exchanger CAX GO:0006816|GO:0015369 GYO_1059 1b9829dadd1c9e6f09467d101fa9d2d0 351 TIGRFAM TIGR00846 caca2: calcium/proton exchanger 1 349 2.7E-131 T 14-10-2018 IPR004713 Calcium/proton exchanger GO:0006812|GO:0008324|GO:0016021|GO:0055085 GYO_2636 dc79d55f10fd5f40fd2380780a074391 371 SUPERFAMILY SSF53187 5 368 6.54E-64 T 14-10-2018 GYO_2636 dc79d55f10fd5f40fd2380780a074391 371 Gene3D G3DSA:3.30.70.360 176 287 5.6E-137 T 14-10-2018 GYO_2636 dc79d55f10fd5f40fd2380780a074391 371 Pfam PF01546 Peptidase family M20/M25/M40 73 367 1.1E-25 T 14-10-2018 IPR002933 Peptidase M20 GO:0016787 GYO_2636 dc79d55f10fd5f40fd2380780a074391 371 ProSitePatterns PS00758 ArgE / dapE / ACY1 / CPG2 / yscS family signature 1. 71 80 - T 14-10-2018 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 GYO_2636 dc79d55f10fd5f40fd2380780a074391 371 Gene3D G3DSA:3.40.630.10 14 362 5.6E-137 T 14-10-2018 GYO_2636 dc79d55f10fd5f40fd2380780a074391 371 ProSitePatterns PS00759 ArgE / dapE / ACY1 / CPG2 / yscS family signature 2. 104 142 - T 14-10-2018 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 GYO_2636 dc79d55f10fd5f40fd2380780a074391 371 TIGRFAM TIGR01883 PepT-like: peptidase T-like protein 6 367 1.2E-191 T 14-10-2018 IPR010162 Peptidase M20B, peptidase T-like GYO_2636 dc79d55f10fd5f40fd2380780a074391 371 SUPERFAMILY SSF55031 179 284 1.31E-21 T 14-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain GYO_2636 dc79d55f10fd5f40fd2380780a074391 371 Pfam PF07687 Peptidase dimerisation domain 181 272 6.7E-15 T 14-10-2018 IPR011650 Peptidase M20, dimerisation domain GYO_2636 dc79d55f10fd5f40fd2380780a074391 371 PIRSF PIRSF001123 4 100 5.9E-6 T 14-10-2018 IPR008007 Peptidase M42 GYO_2636 dc79d55f10fd5f40fd2380780a074391 371 PIRSF PIRSF001123 256 371 5.0E-7 T 14-10-2018 IPR008007 Peptidase M42 GYO_2636 dc79d55f10fd5f40fd2380780a074391 371 PIRSF PIRSF001123 80 182 1.9E-6 T 14-10-2018 IPR008007 Peptidase M42 GYO_2031 11b7e2e08cb8ab316a1df75aedfc69cc 346 Gene3D G3DSA:3.40.50.720 7 338 2.8E-142 T 14-10-2018 GYO_2031 11b7e2e08cb8ab316a1df75aedfc69cc 346 Hamap MF_02121 Aspartate-semialdehyde dehydrogenase [asd]. 4 341 38.368 T 14-10-2018 IPR012080 Aspartate-semialdehyde dehydrogenase GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 GYO_2031 11b7e2e08cb8ab316a1df75aedfc69cc 346 ProSitePatterns PS01103 Aspartate-semialdehyde dehydrogenase signature. 237 251 - T 14-10-2018 IPR000319 Aspartate-semialdehyde dehydrogenase, conserved site GO:0004073|GO:0006520|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 GYO_2031 11b7e2e08cb8ab316a1df75aedfc69cc 346 TIGRFAM TIGR01296 asd_B: aspartate-semialdehyde dehydrogenase 6 342 7.5E-171 T 14-10-2018 IPR005986 Aspartate-semialdehyde dehydrogenase, beta-type GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 GYO_2031 11b7e2e08cb8ab316a1df75aedfc69cc 346 SMART SM00859 6 121 3.3E-41 T 14-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 GYO_2031 11b7e2e08cb8ab316a1df75aedfc69cc 346 SUPERFAMILY SSF55347 129 328 9.52E-75 T 14-10-2018 GYO_2031 11b7e2e08cb8ab316a1df75aedfc69cc 346 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 7 120 1.3E-34 T 14-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 GYO_2031 11b7e2e08cb8ab316a1df75aedfc69cc 346 PIRSF PIRSF000148 4 346 2.1E-129 T 14-10-2018 GYO_2031 11b7e2e08cb8ab316a1df75aedfc69cc 346 SUPERFAMILY SSF51735 5 157 3.96E-49 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily GYO_2031 11b7e2e08cb8ab316a1df75aedfc69cc 346 Gene3D G3DSA:3.30.360.10 128 324 2.8E-142 T 14-10-2018 GYO_2031 11b7e2e08cb8ab316a1df75aedfc69cc 346 Pfam PF02774 Semialdehyde dehydrogenase, dimerisation domain 139 327 1.3E-61 T 14-10-2018 IPR012280 Semialdehyde dehydrogenase, dimerisation domain GO:0005737|GO:0008652|GO:0016620|GO:0046983 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 GYO_1110 36db3b3c04619b8abf85d8749ba6d523 160 Pfam PF01047 MarR family 48 105 1.1E-20 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 GYO_1110 36db3b3c04619b8abf85d8749ba6d523 160 Gene3D G3DSA:1.10.10.10 17 158 2.1E-28 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily GYO_1110 36db3b3c04619b8abf85d8749ba6d523 160 SUPERFAMILY SSF46785 40 155 3.08E-26 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily GYO_1110 36db3b3c04619b8abf85d8749ba6d523 160 PRINTS PR00598 Bacterial regulatory protein MarR family signature 64 80 2.8E-9 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 GYO_1110 36db3b3c04619b8abf85d8749ba6d523 160 PRINTS PR00598 Bacterial regulatory protein MarR family signature 81 96 2.8E-9 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 GYO_1110 36db3b3c04619b8abf85d8749ba6d523 160 PRINTS PR00598 Bacterial regulatory protein MarR family signature 100 116 2.8E-9 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 GYO_1110 36db3b3c04619b8abf85d8749ba6d523 160 SMART SM00347 40 140 1.2E-35 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 GYO_3959 2b543b1fa3498108cfa03874e9cb9af6 255 Gene3D G3DSA:3.30.1330.80 97 219 1.6E-81 T 14-10-2018 GYO_3959 2b543b1fa3498108cfa03874e9cb9af6 255 Pfam PF03306 Alpha-acetolactate decarboxylase 22 239 2.1E-83 T 14-10-2018 IPR005128 Alpha-acetolactate decarboxylase GO:0045151|GO:0047605 KEGG: 00650+4.1.1.5|KEGG: 00660+4.1.1.5|MetaCyc: PWY-5939 GYO_3959 2b543b1fa3498108cfa03874e9cb9af6 255 TIGRFAM TIGR01252 acetolac_decarb: alpha-acetolactate decarboxylase 20 251 3.5E-110 T 14-10-2018 IPR005128 Alpha-acetolactate decarboxylase GO:0045151|GO:0047605 KEGG: 00650+4.1.1.5|KEGG: 00660+4.1.1.5|MetaCyc: PWY-5939 GYO_3959 2b543b1fa3498108cfa03874e9cb9af6 255 SUPERFAMILY SSF117856 21 251 9.42E-85 T 14-10-2018 GYO_3959 2b543b1fa3498108cfa03874e9cb9af6 255 PIRSF PIRSF001332 4 252 2.8E-100 T 14-10-2018 IPR005128 Alpha-acetolactate decarboxylase GO:0045151|GO:0047605 KEGG: 00650+4.1.1.5|KEGG: 00660+4.1.1.5|MetaCyc: PWY-5939 GYO_3959 2b543b1fa3498108cfa03874e9cb9af6 255 Gene3D G3DSA:3.30.1330.80 22 238 1.6E-81 T 14-10-2018 GYO_2505 23c229c34b8ffa2fd8b88caa93cd125f 75 Hamap MF_00798 Transcription attenuation protein MtrB [mtrB]. 1 73 29.882 T 14-10-2018 IPR000824 Transcription attenuation protein MtrB GO:0003723|GO:0006353|GO:0006355 GYO_2505 23c229c34b8ffa2fd8b88caa93cd125f 75 Pfam PF02081 Tryptophan RNA-binding attenuator protein 6 73 5.0E-40 T 14-10-2018 IPR023558 Tryptophan RNA-binding attenuator protein domain GYO_2505 23c229c34b8ffa2fd8b88caa93cd125f 75 PRINTS PR00687 Tryptophan RNA-binding attenuator protein signature 42 58 4.8E-41 T 14-10-2018 IPR000824 Transcription attenuation protein MtrB GO:0003723|GO:0006353|GO:0006355 GYO_2505 23c229c34b8ffa2fd8b88caa93cd125f 75 PRINTS PR00687 Tryptophan RNA-binding attenuator protein signature 9 26 4.8E-41 T 14-10-2018 IPR000824 Transcription attenuation protein MtrB GO:0003723|GO:0006353|GO:0006355 GYO_2505 23c229c34b8ffa2fd8b88caa93cd125f 75 PRINTS PR00687 Tryptophan RNA-binding attenuator protein signature 26 42 4.8E-41 T 14-10-2018 IPR000824 Transcription attenuation protein MtrB GO:0003723|GO:0006353|GO:0006355 GYO_2505 23c229c34b8ffa2fd8b88caa93cd125f 75 PRINTS PR00687 Tryptophan RNA-binding attenuator protein signature 58 74 4.8E-41 T 14-10-2018 IPR000824 Transcription attenuation protein MtrB GO:0003723|GO:0006353|GO:0006355 GYO_2505 23c229c34b8ffa2fd8b88caa93cd125f 75 Gene3D G3DSA:2.60.40.50 1 75 9.2E-45 T 14-10-2018 IPR016031 Tryptophan RNA-binding attenuator protein-like domain superfamily GYO_2505 23c229c34b8ffa2fd8b88caa93cd125f 75 SUPERFAMILY SSF51219 7 74 2.28E-36 T 14-10-2018 IPR016031 Tryptophan RNA-binding attenuator protein-like domain superfamily GYO_0625 b550c238e892bd86329c6e4659171b9c 263 Hamap MF_01830 Putative hydro-lyase . 8 262 55.476 T 14-10-2018 IPR016938 Uncharacterised protein family UPF0317 GYO_0625 b550c238e892bd86329c6e4659171b9c 263 SUPERFAMILY SSF160920 4 255 3.01E-116 T 14-10-2018 IPR038021 Putative hydro-lyase GYO_0625 b550c238e892bd86329c6e4659171b9c 263 Gene3D G3DSA:3.40.1640.10 17 250 1.8E-98 T 14-10-2018 GYO_0625 b550c238e892bd86329c6e4659171b9c 263 Pfam PF07286 Protein of unknown function (DUF1445) 112 254 1.4E-67 T 14-10-2018 IPR009906 D-glutamate cyclase GYO_0625 b550c238e892bd86329c6e4659171b9c 263 Gene3D G3DSA:3.30.2040.10 122 234 1.8E-98 T 14-10-2018 GYO_0625 b550c238e892bd86329c6e4659171b9c 263 PIRSF PIRSF029755 1 263 2.5E-129 T 14-10-2018 IPR016938 Uncharacterised protein family UPF0317 GYO_2351 c6185d24a2f43e957db286216b212795 298 SUPERFAMILY SSF103481 211 288 9.02E-10 T 14-10-2018 GYO_2351 c6185d24a2f43e957db286216b212795 298 SUPERFAMILY SSF103481 42 148 6.93E-11 T 14-10-2018 GYO_2351 c6185d24a2f43e957db286216b212795 298 TIGRFAM TIGR00688 rarD: protein RarD 7 262 3.0E-121 T 14-10-2018 IPR004626 RarD protein GO:0005887 GYO_2351 c6185d24a2f43e957db286216b212795 298 Pfam PF00892 EamA-like transporter family 8 146 2.4E-14 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 GYO_2351 c6185d24a2f43e957db286216b212795 298 Pfam PF00892 EamA-like transporter family 155 285 4.7E-8 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 GYO_0918 a5d97e6b9b78799472e64f91ca82352b 331 SUPERFAMILY SSF159774 34 324 4.18E-98 T 14-10-2018 IPR023158 YerB-like superfamily GYO_0918 a5d97e6b9b78799472e64f91ca82352b 331 Pfam PF11258 Protein of unknown function (DUF3048) N-terminal domain 37 179 1.3E-51 T 14-10-2018 IPR021416 Protein of unknown function DUF3048, N-terminal GYO_0918 a5d97e6b9b78799472e64f91ca82352b 331 Pfam PF17479 Protein of unknown function (DUF3048) C-terminal domain 211 314 1.4E-24 T 14-10-2018 IPR035328 Protein of unknown function DUF3048, C-terminal domain GYO_0918 a5d97e6b9b78799472e64f91ca82352b 331 Gene3D G3DSA:3.50.90.10 20 331 5.4E-132 T 14-10-2018 IPR023158 YerB-like superfamily GYO_0047 77cc6cec785b9cc75e3780c2fa77f260 664 Pfam PF01588 Putative tRNA binding domain 570 661 3.8E-27 T 14-10-2018 IPR002547 tRNA-binding domain GO:0000049 Reactome: R-HSA-379716 GYO_0047 77cc6cec785b9cc75e3780c2fa77f260 664 Gene3D G3DSA:1.10.730.10 352 521 5.7E-53 T 14-10-2018 GYO_0047 77cc6cec785b9cc75e3780c2fa77f260 664 SUPERFAMILY SSF50249 559 663 2.69E-30 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold GYO_0047 77cc6cec785b9cc75e3780c2fa77f260 664 PRINTS PR01041 Methionyl-tRNA synthetase signature 90 101 1.6E-32 T 14-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 GYO_0047 77cc6cec785b9cc75e3780c2fa77f260 664 PRINTS PR01041 Methionyl-tRNA synthetase signature 10 23 1.6E-32 T 14-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 GYO_0047 77cc6cec785b9cc75e3780c2fa77f260 664 PRINTS PR01041 Methionyl-tRNA synthetase signature 42 56 1.6E-32 T 14-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 GYO_0047 77cc6cec785b9cc75e3780c2fa77f260 664 PRINTS PR01041 Methionyl-tRNA synthetase signature 237 248 1.6E-32 T 14-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 GYO_0047 77cc6cec785b9cc75e3780c2fa77f260 664 PRINTS PR01041 Methionyl-tRNA synthetase signature 270 285 1.6E-32 T 14-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 GYO_0047 77cc6cec785b9cc75e3780c2fa77f260 664 PRINTS PR01041 Methionyl-tRNA synthetase signature 362 373 1.6E-32 T 14-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 GYO_0047 77cc6cec785b9cc75e3780c2fa77f260 664 SUPERFAMILY SSF52374 5 361 1.34E-115 T 14-10-2018 GYO_0047 77cc6cec785b9cc75e3780c2fa77f260 664 Pfam PF08264 Anticodon-binding domain of tRNA 397 533 1.2E-9 T 14-10-2018 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0004812|GO:0006418 GYO_0047 77cc6cec785b9cc75e3780c2fa77f260 664 SUPERFAMILY SSF47323 364 577 9.81E-51 T 14-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 GYO_0047 77cc6cec785b9cc75e3780c2fa77f260 664 Hamap MF_01228 Methionine--tRNA ligase [metG]. 3 523 51.899 T 14-10-2018 IPR023457 Methionine-tRNA synthetase, type 2 GO:0004825 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 GYO_0047 77cc6cec785b9cc75e3780c2fa77f260 664 TIGRFAM TIGR00398 metG: methionine--tRNA ligase 8 524 3.3E-194 T 14-10-2018 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 GYO_0047 77cc6cec785b9cc75e3780c2fa77f260 664 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 17 26 - T 14-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 GYO_0047 77cc6cec785b9cc75e3780c2fa77f260 664 TIGRFAM TIGR00399 metG_C_term: methionine--tRNA ligase, beta subunit 529 664 4.4E-51 T 14-10-2018 IPR004495 Methionyl-tRNA synthetase, beta subunit, C-terminal GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 GYO_0047 77cc6cec785b9cc75e3780c2fa77f260 664 Gene3D G3DSA:3.40.50.620 8 345 8.1E-154 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold GYO_0047 77cc6cec785b9cc75e3780c2fa77f260 664 Pfam PF09334 tRNA synthetases class I (M) 8 374 6.2E-121 T 14-10-2018 IPR015413 Methionyl/Leucyl tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0006418 GYO_0047 77cc6cec785b9cc75e3780c2fa77f260 664 Gene3D G3DSA:2.170.220.10 119 239 8.1E-154 T 14-10-2018 GYO_0047 77cc6cec785b9cc75e3780c2fa77f260 664 Gene3D G3DSA:2.40.50.140 555 664 1.5E-34 T 14-10-2018 GYO_0968 56f9e2132b03bf08b8d42465655a321d 664 Pfam PF02449 Beta-galactosidase 10 374 5.5E-121 T 14-10-2018 IPR013529 Glycoside hydrolase, family 42, N-terminal GO:0004565|GO:0005975|GO:0009341 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 GYO_0968 56f9e2132b03bf08b8d42465655a321d 664 SUPERFAMILY SSF52317 385 593 5.49E-29 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like GYO_0968 56f9e2132b03bf08b8d42465655a321d 664 PIRSF PIRSF001084 1 661 9.3E-210 T 14-10-2018 IPR003476 Glycoside hydrolase, family 42 GO:0004565|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 GYO_0968 56f9e2132b03bf08b8d42465655a321d 664 Pfam PF08533 Beta-galactosidase C-terminal domain 602 659 8.4E-9 T 14-10-2018 IPR013739 Beta-galactosidase C-terminal GO:0004565|GO:0006012 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 GYO_0968 56f9e2132b03bf08b8d42465655a321d 664 Pfam PF08532 Beta-galactosidase trimerisation domain 388 593 7.3E-47 T 14-10-2018 IPR013738 Beta-galactosidase trimerisation GO:0004565|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 GYO_0968 56f9e2132b03bf08b8d42465655a321d 664 Gene3D G3DSA:3.20.20.80 2 380 7.4E-97 T 14-10-2018 GYO_0968 56f9e2132b03bf08b8d42465655a321d 664 SUPERFAMILY SSF51445 2 356 9.29E-89 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily GYO_0968 56f9e2132b03bf08b8d42465655a321d 664 Gene3D G3DSA:3.40.50.880 386 596 2.3E-30 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like GYO_3702 ef44475d755da2456bbe2dcb7e38eab4 177 SUPERFAMILY SSF46785 8 158 4.21E-22 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily GYO_3702 ef44475d755da2456bbe2dcb7e38eab4 177 Gene3D G3DSA:1.10.10.10 7 92 2.0E-21 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily GYO_3702 ef44475d755da2456bbe2dcb7e38eab4 177 PIRSF PIRSF006707 2 177 1.2E-49 T 14-10-2018 IPR026282 DNA-binding protein, MJ1563 type GYO_4042 839dc23c71bce54e1701d345000c7974 262 Hamap MF_00187 Sulfur carrier protein FdhD [fdhD]. 3 261 32.586 T 14-10-2018 IPR003786 Sulfur carrier protein FdhD GO:0016783 GYO_4042 839dc23c71bce54e1701d345000c7974 262 PIRSF PIRSF015626 2 262 1.7E-80 T 14-10-2018 IPR003786 Sulfur carrier protein FdhD GO:0016783 GYO_4042 839dc23c71bce54e1701d345000c7974 262 Pfam PF02634 FdhD/NarQ family 27 260 1.1E-80 T 14-10-2018 IPR003786 Sulfur carrier protein FdhD GO:0016783 GYO_4042 839dc23c71bce54e1701d345000c7974 262 TIGRFAM TIGR00129 fdhD_narQ: formate dehydrogenase family accessory protein FdhD 23 261 1.2E-97 T 14-10-2018 IPR003786 Sulfur carrier protein FdhD GO:0016783 GYO_4042 839dc23c71bce54e1701d345000c7974 262 Gene3D G3DSA:3.40.140.10 115 262 1.1E-50 T 14-10-2018 GYO_4042 839dc23c71bce54e1701d345000c7974 262 SUPERFAMILY SSF53927 6 260 1.77E-78 T 14-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 GYO_4042 839dc23c71bce54e1701d345000c7974 262 Gene3D G3DSA:3.10.20.10 29 112 9.1E-13 T 14-10-2018 GYO_4243 c207a4db81047ea56b0c04638e368555 412 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 61 83 5.1E-24 T 14-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 GYO_4243 c207a4db81047ea56b0c04638e368555 412 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 176 191 5.1E-24 T 14-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 GYO_4243 c207a4db81047ea56b0c04638e368555 412 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 226 238 5.1E-24 T 14-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 GYO_4243 c207a4db81047ea56b0c04638e368555 412 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 193 215 5.1E-24 T 14-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 GYO_4243 c207a4db81047ea56b0c04638e368555 412 Gene3D G3DSA:3.10.290.10 342 412 8.6E-24 T 14-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 GYO_4243 c207a4db81047ea56b0c04638e368555 412 SUPERFAMILY SSF55174 336 411 9.03E-19 T 14-10-2018 GYO_4243 c207a4db81047ea56b0c04638e368555 412 Hamap MF_02007 Tyrosine--tRNA ligase [tyrS]. 13 412 45.122 T 14-10-2018 IPR024108 Tyrosine-tRNA ligase, bacterial-type, type 2 GO:0004831 KEGG: 00970+6.1.1.1 GYO_4243 c207a4db81047ea56b0c04638e368555 412 TIGRFAM TIGR00234 tyrS: tyrosine--tRNA ligase 14 412 2.5E-141 T 14-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 GYO_4243 c207a4db81047ea56b0c04638e368555 412 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 57 67 - T 14-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 GYO_4243 c207a4db81047ea56b0c04638e368555 412 Gene3D G3DSA:3.40.50.620 15 232 2.4E-70 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold GYO_4243 c207a4db81047ea56b0c04638e368555 412 Pfam PF00579 tRNA synthetases class I (W and Y) 47 333 1.6E-80 T 14-10-2018 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 GYO_4243 c207a4db81047ea56b0c04638e368555 412 SUPERFAMILY SSF52374 17 332 1.25E-87 T 14-10-2018 GYO_4243 c207a4db81047ea56b0c04638e368555 412 SMART SM00363 353 412 2.5E-7 T 14-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 GYO_4243 c207a4db81047ea56b0c04638e368555 412 Gene3D G3DSA:1.10.240.10 233 341 1.4E-34 T 14-10-2018 GYO_4243 c207a4db81047ea56b0c04638e368555 412 Pfam PF01479 S4 domain 356 388 8.8E-9 T 14-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 GYO_4359 406249bb5a6d013a9533578681210f04 165 Gene3D G3DSA:3.40.630.30 1 163 1.4E-24 T 14-10-2018 GYO_4359 406249bb5a6d013a9533578681210f04 165 Pfam PF00583 Acetyltransferase (GNAT) family 47 140 9.9E-12 T 14-10-2018 IPR000182 GNAT domain GYO_4359 406249bb5a6d013a9533578681210f04 165 SUPERFAMILY SSF55729 6 159 1.59E-22 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase GYO_0577 076241e55993b70e3471b5661bd1e50f 290 Gene3D G3DSA:3.40.190.290 92 290 1.1E-32 T 14-10-2018 GYO_0577 076241e55993b70e3471b5661bd1e50f 290 Pfam PF03466 LysR substrate binding domain 88 289 1.2E-29 T 14-10-2018 IPR005119 LysR, substrate-binding GYO_0577 076241e55993b70e3471b5661bd1e50f 290 SUPERFAMILY SSF53850 89 289 7.24E-29 T 14-10-2018 GYO_0577 076241e55993b70e3471b5661bd1e50f 290 Gene3D G3DSA:1.10.10.10 1 82 1.5E-28 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily GYO_0577 076241e55993b70e3471b5661bd1e50f 290 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 62 1.9E-20 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 GYO_0577 076241e55993b70e3471b5661bd1e50f 290 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 1.8E-10 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 GYO_0577 076241e55993b70e3471b5661bd1e50f 290 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 1.8E-10 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 GYO_0577 076241e55993b70e3471b5661bd1e50f 290 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 1.8E-10 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 GYO_0577 076241e55993b70e3471b5661bd1e50f 290 SUPERFAMILY SSF46785 1 88 2.12E-21 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily GYO_2765 149e90bf30e312a54f79f880bf6d1cef 716 Gene3D G3DSA:3.90.1310.30 68 574 8.0E-233 T 14-10-2018 GYO_2765 149e90bf30e312a54f79f880bf6d1cef 716 Pfam PF00905 Penicillin binding protein transpeptidase domain 353 682 3.9E-81 T 14-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 GYO_2765 149e90bf30e312a54f79f880bf6d1cef 716 Gene3D G3DSA:1.10.10.1230 93 195 8.0E-233 T 14-10-2018 GYO_2765 149e90bf30e312a54f79f880bf6d1cef 716 Gene3D G3DSA:3.40.710.10 320 663 8.0E-233 T 14-10-2018 GYO_2765 149e90bf30e312a54f79f880bf6d1cef 716 SUPERFAMILY SSF56601 320 689 3.5E-68 T 14-10-2018 IPR012338 Beta-lactamase/transpeptidase-like GYO_2765 149e90bf30e312a54f79f880bf6d1cef 716 SUPERFAMILY SSF56519 63 319 1.05E-36 T 14-10-2018 IPR036138 Penicillin-binding protein, dimerisation domain superfamily GO:0008658 GYO_2765 149e90bf30e312a54f79f880bf6d1cef 716 Pfam PF03717 Penicillin-binding Protein dimerisation domain 67 305 1.9E-36 T 14-10-2018 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 GYO_3218 f188da27b928c46baa42cec3895a3710 214 SMART SM00116 10 58 1.2E-12 T 14-10-2018 IPR000644 CBS domain GYO_3218 f188da27b928c46baa42cec3895a3710 214 SMART SM00116 81 128 1.2E-13 T 14-10-2018 IPR000644 CBS domain GYO_3218 f188da27b928c46baa42cec3895a3710 214 SUPERFAMILY SSF54631 1 130 1.12E-30 T 14-10-2018 GYO_3218 f188da27b928c46baa42cec3895a3710 214 Pfam PF00571 CBS domain 74 126 2.9E-10 T 14-10-2018 IPR000644 CBS domain GYO_3218 f188da27b928c46baa42cec3895a3710 214 Pfam PF00571 CBS domain 3 56 1.4E-12 T 14-10-2018 IPR000644 CBS domain GYO_3218 f188da27b928c46baa42cec3895a3710 214 Gene3D G3DSA:3.10.580.10 1 155 2.9E-39 T 14-10-2018 GYO_2819 09cd93f58076a2e73cd408ac66099d33 611 TIGRFAM TIGR01393 lepA: elongation factor 4 13 606 0.0 T 14-10-2018 IPR006297 Elongation factor 4 GO:0005525 GYO_2819 09cd93f58076a2e73cd408ac66099d33 611 Gene3D G3DSA:3.40.50.300 10 195 7.4E-75 T 14-10-2018 GYO_2819 09cd93f58076a2e73cd408ac66099d33 611 SUPERFAMILY SSF54980 409 504 8.15E-27 T 14-10-2018 IPR035647 EF-G domain III/V-like GYO_2819 09cd93f58076a2e73cd408ac66099d33 611 SUPERFAMILY SSF54980 302 380 1.01E-18 T 14-10-2018 IPR035647 EF-G domain III/V-like GYO_2819 09cd93f58076a2e73cd408ac66099d33 611 SMART SM00838 408 496 3.0E-4 T 14-10-2018 IPR000640 Elongation factor EFG, domain V-like GYO_2819 09cd93f58076a2e73cd408ac66099d33 611 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 52 67 - T 14-10-2018 IPR031157 Tr-type G domain, conserved site GYO_2819 09cd93f58076a2e73cd408ac66099d33 611 SUPERFAMILY SSF50447 176 298 1.04E-33 T 14-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily GYO_2819 09cd93f58076a2e73cd408ac66099d33 611 Pfam PF03144 Elongation factor Tu domain 2 215 285 6.4E-13 T 14-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 GYO_2819 09cd93f58076a2e73cd408ac66099d33 611 PRINTS PR00315 GTP-binding elongation factor signature 59 67 3.9E-14 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 GYO_2819 09cd93f58076a2e73cd408ac66099d33 611 PRINTS PR00315 GTP-binding elongation factor signature 16 29 3.9E-14 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 GYO_2819 09cd93f58076a2e73cd408ac66099d33 611 PRINTS PR00315 GTP-binding elongation factor signature 84 94 3.9E-14 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 GYO_2819 09cd93f58076a2e73cd408ac66099d33 611 PRINTS PR00315 GTP-binding elongation factor signature 136 145 3.9E-14 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 GYO_2819 09cd93f58076a2e73cd408ac66099d33 611 PRINTS PR00315 GTP-binding elongation factor signature 100 111 3.9E-14 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 GYO_2819 09cd93f58076a2e73cd408ac66099d33 611 Gene3D G3DSA:3.30.70.870 296 377 2.3E-36 T 14-10-2018 GYO_2819 09cd93f58076a2e73cd408ac66099d33 611 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 15 184 4.9E-20 T 14-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 GYO_2819 09cd93f58076a2e73cd408ac66099d33 611 Gene3D G3DSA:2.40.30.10 196 295 1.9E-37 T 14-10-2018 GYO_2819 09cd93f58076a2e73cd408ac66099d33 611 Gene3D G3DSA:3.30.70.2570 490 564 2.6E-35 T 14-10-2018 IPR038363 LepA, C-terminal domain superfamily GYO_2819 09cd93f58076a2e73cd408ac66099d33 611 Gene3D G3DSA:3.30.70.3380 378 489 6.2E-44 T 14-10-2018 GYO_2819 09cd93f58076a2e73cd408ac66099d33 611 Pfam PF00679 Elongation factor G C-terminus 409 496 2.7E-25 T 14-10-2018 IPR000640 Elongation factor EFG, domain V-like GYO_2819 09cd93f58076a2e73cd408ac66099d33 611 Pfam PF06421 GTP-binding protein LepA C-terminus 498 604 8.0E-52 T 14-10-2018 IPR013842 GTP-binding protein LepA, C-terminal GYO_2819 09cd93f58076a2e73cd408ac66099d33 611 SUPERFAMILY SSF52540 10 215 2.29E-55 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase GYO_2819 09cd93f58076a2e73cd408ac66099d33 611 Pfam PF00009 Elongation factor Tu GTP binding domain 13 191 7.3E-54 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 GYO_2819 09cd93f58076a2e73cd408ac66099d33 611 Hamap MF_00071 Elongation factor 4 [lepA]. 1 608 314.407 T 14-10-2018 IPR006297 Elongation factor 4 GO:0005525 GYO_1187 b33cf45c9b607379be69850b8d1644cb 392 Pfam PF04285 Protein of unknown function (DUF444) 195 382 5.0E-67 T 14-10-2018 IPR006698 Uncharacterised protein family UPF0229 GYO_1187 b33cf45c9b607379be69850b8d1644cb 392 Pfam PF04285 Protein of unknown function (DUF444) 11 186 2.9E-35 T 14-10-2018 IPR006698 Uncharacterised protein family UPF0229 GYO_1187 b33cf45c9b607379be69850b8d1644cb 392 TIGRFAM TIGR02877 spore_yhbH: sporulation protein YhbH 9 380 1.4E-189 T 14-10-2018 IPR014230 Sporulation protein YhbH GYO_1187 b33cf45c9b607379be69850b8d1644cb 392 Hamap MF_01232 UPF0229 protein YeaH [yeaH]. 7 385 31.379 T 14-10-2018 IPR006698 Uncharacterised protein family UPF0229 GYO_1777 32adf3c6be99b4d4d28e6bd6a4fbe072 193 Pfam PF00717 Peptidase S24-like 47 115 3.3E-20 T 14-10-2018 IPR015927 Peptidase S24/S26A/S26B/S26C GYO_1777 32adf3c6be99b4d4d28e6bd6a4fbe072 193 ProSitePatterns PS00760 Signal peptidases I lysine active site. 93 105 - T 14-10-2018 IPR019757 Peptidase S26A, signal peptidase I, lysine active site GO:0008236|GO:0016021 GYO_1777 32adf3c6be99b4d4d28e6bd6a4fbe072 193 Gene3D G3DSA:2.10.109.10 70 193 9.8E-38 T 14-10-2018 GYO_1777 32adf3c6be99b4d4d28e6bd6a4fbe072 193 ProSitePatterns PS00761 Signal peptidases I signature 3. 150 163 - T 14-10-2018 IPR019758 Peptidase S26A, signal peptidase I, conserved site GO:0008236|GO:0016021 GYO_1777 32adf3c6be99b4d4d28e6bd6a4fbe072 193 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 145 164 4.6E-25 T 14-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 GYO_1777 32adf3c6be99b4d4d28e6bd6a4fbe072 193 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 91 103 4.6E-25 T 14-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 GYO_1777 32adf3c6be99b4d4d28e6bd6a4fbe072 193 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 40 56 4.6E-25 T 14-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 GYO_1777 32adf3c6be99b4d4d28e6bd6a4fbe072 193 TIGRFAM TIGR02227 sigpep_I_bact: signal peptidase I 25 187 9.1E-54 T 14-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 GYO_1777 32adf3c6be99b4d4d28e6bd6a4fbe072 193 SUPERFAMILY SSF51306 38 190 2.62E-51 T 14-10-2018 IPR036286 LexA/Signal peptidase-like superfamily GYO_1777 32adf3c6be99b4d4d28e6bd6a4fbe072 193 ProSitePatterns PS00501 Signal peptidases I serine active site. 49 56 - T 14-10-2018 IPR019756 Peptidase S26A, signal peptidase I, serine active site GO:0008236|GO:0016021 Reactome: R-HSA-1799339|Reactome: R-HSA-381771|Reactome: R-HSA-400511|Reactome: R-HSA-422085 GYO_2302 99e090189657350db1a85ec1e69053c8 110 SUPERFAMILY SSF50249 4 109 5.14E-30 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold GYO_2302 99e090189657350db1a85ec1e69053c8 110 Gene3D G3DSA:2.40.50.140 2 109 2.9E-31 T 14-10-2018 GYO_2302 99e090189657350db1a85ec1e69053c8 110 Pfam PF01588 Putative tRNA binding domain 12 107 4.7E-18 T 14-10-2018 IPR002547 tRNA-binding domain GO:0000049 Reactome: R-HSA-379716 GYO_2302 99e090189657350db1a85ec1e69053c8 110 TIGRFAM TIGR02222 chap_CsaA: export-related chaperone protein CsaA 4 109 3.3E-51 T 14-10-2018 IPR008231 Probable chaperone CsaA GYO_0066 c870f601965fdbd05b601f61b0939309 1177 SUPERFAMILY SSF141259 491 568 1.05E-26 T 14-10-2018 IPR036101 CarD-like/TRCF domain superfamily GYO_0066 c870f601965fdbd05b601f61b0939309 1177 Hamap MF_00969 Transcription-repair-coupling factor [mfd]. 42 1118 29.18 T 14-10-2018 IPR004576 Transcription-repair coupling factor GO:0003684|GO:0005524|GO:0006281 GYO_0066 c870f601965fdbd05b601f61b0939309 1177 Pfam PF00270 DEAD/DEAH box helicase 625 784 2.4E-17 T 14-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 GYO_0066 c870f601965fdbd05b601f61b0939309 1177 SMART SM01058 499 596 1.5E-51 T 14-10-2018 IPR003711 CarD-like/TRCF domain GYO_0066 c870f601965fdbd05b601f61b0939309 1177 SUPERFAMILY SSF52540 14 367 2.7E-92 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase GYO_0066 c870f601965fdbd05b601f61b0939309 1177 SMART SM00490 846 930 1.9E-20 T 14-10-2018 IPR001650 Helicase, C-terminal GYO_0066 c870f601965fdbd05b601f61b0939309 1177 TIGRFAM TIGR00580 mfd: transcription-repair coupling factor 157 1098 0.0 T 14-10-2018 IPR004576 Transcription-repair coupling factor GO:0003684|GO:0005524|GO:0006281 GYO_0066 c870f601965fdbd05b601f61b0939309 1177 Gene3D G3DSA:2.30.30.840 503 561 3.8E-247 T 14-10-2018 GYO_0066 c870f601965fdbd05b601f61b0939309 1177 SMART SM00487 620 810 9.3E-36 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain GYO_0066 c870f601965fdbd05b601f61b0939309 1177 Pfam PF03461 TRCF domain 1026 1117 1.1E-26 T 14-10-2018 IPR005118 Transcription-repair-coupling factor, C-terminal domain GO:0006281 GYO_0066 c870f601965fdbd05b601f61b0939309 1177 SUPERFAMILY SSF52540 543 803 1.5E-61 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase GYO_0066 c870f601965fdbd05b601f61b0939309 1177 Gene3D G3DSA:3.40.50.300 562 801 3.8E-247 T 14-10-2018 GYO_0066 c870f601965fdbd05b601f61b0939309 1177 Gene3D G3DSA:3.30.2060.10 140 225 4.1E-68 T 14-10-2018 GYO_0066 c870f601965fdbd05b601f61b0939309 1177 SMART SM00982 1024 1124 5.2E-38 T 14-10-2018 IPR005118 Transcription-repair-coupling factor, C-terminal domain GO:0006281 GYO_0066 c870f601965fdbd05b601f61b0939309 1177 Gene3D G3DSA:3.90.1150.50 1020 1177 4.2E-44 T 14-10-2018 IPR037235 TRCF-like, C-terminal domain GYO_0066 c870f601965fdbd05b601f61b0939309 1177 SUPERFAMILY SSF52540 802 1009 5.55E-49 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase GYO_0066 c870f601965fdbd05b601f61b0939309 1177 Pfam PF00271 Helicase conserved C-terminal domain 828 929 1.9E-18 T 14-10-2018 IPR001650 Helicase, C-terminal GYO_0066 c870f601965fdbd05b601f61b0939309 1177 Gene3D G3DSA:3.40.50.300 498 1009 3.8E-247 T 14-10-2018 GYO_0066 c870f601965fdbd05b601f61b0939309 1177 Gene3D G3DSA:3.40.50.11180 35 327 4.1E-68 T 14-10-2018 GYO_0066 c870f601965fdbd05b601f61b0939309 1177 Pfam PF02559 CarD-like/TRCF domain 500 595 7.3E-32 T 14-10-2018 IPR003711 CarD-like/TRCF domain GYO_0066 c870f601965fdbd05b601f61b0939309 1177 SUPERFAMILY SSF143517 1011 1169 4.18E-37 T 14-10-2018 IPR037235 TRCF-like, C-terminal domain GYO_0066 c870f601965fdbd05b601f61b0939309 1177 SUPERFAMILY SSF52540 377 490 1.59E-26 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase GYO_3496 b9d97d8ac38b0c2cfdeb04804530a777 442 Pfam PF13726 Na+-H+ antiporter family 2 88 1.8E-33 T 14-10-2018 IPR032813 Putative Na+/H+ antiporter, N-terminal GYO_3496 b9d97d8ac38b0c2cfdeb04804530a777 442 Pfam PF03553 Na+/H+ antiporter family 150 436 1.9E-69 T 14-10-2018 IPR018461 Na+/H+ antiporter, NhaC-like, C-terminal GO:0016021 GYO_3076 54c36c9cc4d99ce8552fdb18852af1ac 574 Gene3D G3DSA:3.40.50.1220 201 366 9.2E-63 T 14-10-2018 GYO_3076 54c36c9cc4d99ce8552fdb18852af1ac 574 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 18 179 3.8E-55 T 14-10-2018 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 GYO_3076 54c36c9cc4d99ce8552fdb18852af1ac 574 Gene3D G3DSA:3.40.50.970 371 573 1.8E-69 T 14-10-2018 GYO_3076 54c36c9cc4d99ce8552fdb18852af1ac 574 SUPERFAMILY SSF52518 14 194 5.2E-61 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold GYO_3076 54c36c9cc4d99ce8552fdb18852af1ac 574 SUPERFAMILY SSF52518 377 572 2.5E-65 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold GYO_3076 54c36c9cc4d99ce8552fdb18852af1ac 574 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 400 548 7.0E-51 T 14-10-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 GYO_3076 54c36c9cc4d99ce8552fdb18852af1ac 574 SUPERFAMILY SSF52467 199 368 8.38E-64 T 14-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily GYO_3076 54c36c9cc4d99ce8552fdb18852af1ac 574 Gene3D G3DSA:3.40.50.970 10 191 2.0E-70 T 14-10-2018 GYO_3076 54c36c9cc4d99ce8552fdb18852af1ac 574 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 207 342 5.5E-46 T 14-10-2018 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 GYO_3076 54c36c9cc4d99ce8552fdb18852af1ac 574 TIGRFAM TIGR00118 acolac_lg: acetolactate synthase, large subunit, biosynthetic type 18 572 3.4E-283 T 14-10-2018 IPR012846 Acetolactate synthase, large subunit, biosynthetic GO:0000287|GO:0003984|GO:0009082|GO:0030976|GO:0050660 KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111 GYO_1740 ca520a7ce9bdba7870963fa1b0451aaf 159 SUPERFAMILY SSF54106 1 41 3.27E-7 T 14-10-2018 GYO_1740 ca520a7ce9bdba7870963fa1b0451aaf 159 Pfam PF01476 LysM domain 1 41 1.4E-8 T 14-10-2018 IPR018392 LysM domain GYO_1740 ca520a7ce9bdba7870963fa1b0451aaf 159 Pfam PF03734 L,D-transpeptidase catalytic domain 50 157 1.3E-22 T 14-10-2018 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 GYO_1740 ca520a7ce9bdba7870963fa1b0451aaf 159 SMART SM00257 1 41 8.7E-6 T 14-10-2018 IPR018392 LysM domain GYO_1740 ca520a7ce9bdba7870963fa1b0451aaf 159 Gene3D G3DSA:3.10.350.10 1 42 4.1E-19 T 14-10-2018 IPR036779 LysM domain superfamily GYO_1740 ca520a7ce9bdba7870963fa1b0451aaf 159 Gene3D G3DSA:2.40.440.10 43 159 1.1E-48 T 14-10-2018 IPR038063 L,D-transpeptidase catalytic domain-like GYO_1740 ca520a7ce9bdba7870963fa1b0451aaf 159 SUPERFAMILY SSF141523 50 157 3.92E-37 T 14-10-2018 IPR038063 L,D-transpeptidase catalytic domain-like GYO_1489 b1afe51ff2ed35df1b8354143026192b 759 Pfam PF13361 UvrD-like helicase C-terminal domain 404 545 4.3E-18 T 14-10-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 GYO_1489 b1afe51ff2ed35df1b8354143026192b 759 Gene3D G3DSA:3.40.50.300 409 746 1.3E-79 T 14-10-2018 GYO_1489 b1afe51ff2ed35df1b8354143026192b 759 Gene3D G3DSA:1.10.10.160 242 314 2.4E-84 T 14-10-2018 IPR013986 DExx box DNA helicase domain superfamily GYO_1489 b1afe51ff2ed35df1b8354143026192b 759 Pfam PF00580 UvrD/REP helicase N-terminal domain 136 399 1.2E-63 T 14-10-2018 IPR034739 UvrD/AddA helicase, N-terminal GO:0005524 GYO_1489 b1afe51ff2ed35df1b8354143026192b 759 Gene3D G3DSA:1.10.486.10 510 658 1.3E-79 T 14-10-2018 GYO_1489 b1afe51ff2ed35df1b8354143026192b 759 SUPERFAMILY SSF52540 134 751 3.01E-137 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase GYO_1489 b1afe51ff2ed35df1b8354143026192b 759 Gene3D G3DSA:3.40.50.300 136 401 2.4E-84 T 14-10-2018 GYO_1489 b1afe51ff2ed35df1b8354143026192b 759 Pfam PF13361 UvrD-like helicase C-terminal domain 643 731 1.9E-24 T 14-10-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 GYO_2217 43c93e800735258f971943e1c264e48e 300 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 61 4.6E-22 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 GYO_2217 43c93e800735258f971943e1c264e48e 300 Gene3D G3DSA:1.10.10.10 1 84 9.4E-29 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily GYO_2217 43c93e800735258f971943e1c264e48e 300 Pfam PF03466 LysR substrate binding domain 89 291 3.7E-47 T 14-10-2018 IPR005119 LysR, substrate-binding GYO_2217 43c93e800735258f971943e1c264e48e 300 SUPERFAMILY SSF46785 1 84 3.26E-23 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily GYO_2217 43c93e800735258f971943e1c264e48e 300 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 7.0E-9 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 GYO_2217 43c93e800735258f971943e1c264e48e 300 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 7.0E-9 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 GYO_2217 43c93e800735258f971943e1c264e48e 300 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 7.0E-9 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 GYO_2217 43c93e800735258f971943e1c264e48e 300 Gene3D G3DSA:3.40.190.290 90 298 1.1E-53 T 14-10-2018 GYO_2217 43c93e800735258f971943e1c264e48e 300 SUPERFAMILY SSF53850 88 296 1.21E-41 T 14-10-2018 GYO_2360 d650f9bf5728a4fe5225fbe3af48d56b 200 Pfam PF01738 Dienelactone hydrolase family 64 190 4.3E-10 T 14-10-2018 IPR002925 Dienelactone hydrolase GO:0016787 GYO_2360 d650f9bf5728a4fe5225fbe3af48d56b 200 Gene3D G3DSA:3.40.50.1820 1 199 6.7E-50 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold GYO_2360 d650f9bf5728a4fe5225fbe3af48d56b 200 SUPERFAMILY SSF53474 3 197 6.4E-53 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold GYO_1764 78f05f195e2b562afd0fb5f3af12d423 430 Gene3D G3DSA:3.90.105.10 28 183 2.2E-101 T 14-10-2018 GYO_1764 78f05f195e2b562afd0fb5f3af12d423 430 SUPERFAMILY SSF53218 186 328 2.22E-38 T 14-10-2018 IPR036425 MoaB/Mog-like domain superfamily GYO_1764 78f05f195e2b562afd0fb5f3af12d423 430 SUPERFAMILY SSF63882 8 185 1.96E-52 T 14-10-2018 IPR036135 MoeA, N-terminal and linker domain superfamily GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 GYO_1764 78f05f195e2b562afd0fb5f3af12d423 430 Pfam PF03454 MoeA C-terminal region (domain IV) 341 411 1.8E-19 T 14-10-2018 IPR005111 MoeA, C-terminal, domain IV GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 GYO_1764 78f05f195e2b562afd0fb5f3af12d423 430 SMART SM00852 189 327 2.7E-36 T 14-10-2018 IPR001453 MoaB/Mog domain GYO_1764 78f05f195e2b562afd0fb5f3af12d423 430 Gene3D G3DSA:3.40.980.10 184 326 2.2E-101 T 14-10-2018 IPR036425 MoaB/Mog-like domain superfamily GYO_1764 78f05f195e2b562afd0fb5f3af12d423 430 TIGRFAM TIGR00177 molyb_syn: molybdenum cofactor synthesis domain 186 323 5.6E-33 T 14-10-2018 IPR001453 MoaB/Mog domain GYO_1764 78f05f195e2b562afd0fb5f3af12d423 430 Gene3D G3DSA:2.170.190.11 50 150 2.2E-101 T 14-10-2018 GYO_1764 78f05f195e2b562afd0fb5f3af12d423 430 Gene3D G3DSA:2.40.340.10 333 410 1.4E-14 T 14-10-2018 IPR036688 MoeA, C-terminal, domain IV superfamily GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 GYO_1764 78f05f195e2b562afd0fb5f3af12d423 430 Pfam PF00994 Probable molybdopterin binding domain 189 326 1.8E-24 T 14-10-2018 IPR001453 MoaB/Mog domain GYO_1764 78f05f195e2b562afd0fb5f3af12d423 430 Pfam PF03453 MoeA N-terminal region (domain I and II) 8 176 4.0E-42 T 14-10-2018 IPR005110 MoeA, N-terminal and linker domain GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 GYO_1764 78f05f195e2b562afd0fb5f3af12d423 430 SUPERFAMILY SSF63867 339 412 2.35E-18 T 14-10-2018 IPR036688 MoeA, C-terminal, domain IV superfamily GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 GYO_2214 a650b87b74e79c733d161d6a497a6641 329 Gene3D G3DSA:3.40.50.720 139 276 4.1E-86 T 14-10-2018 GYO_2214 a650b87b74e79c733d161d6a497a6641 329 Pfam PF00107 Zinc-binding dehydrogenase 169 291 1.8E-27 T 14-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 GYO_2214 a650b87b74e79c733d161d6a497a6641 329 SUPERFAMILY SSF50129 1 162 1.0E-30 T 14-10-2018 IPR011032 GroES-like superfamily GYO_2214 a650b87b74e79c733d161d6a497a6641 329 Gene3D G3DSA:3.90.180.10 18 319 4.1E-86 T 14-10-2018 GYO_2214 a650b87b74e79c733d161d6a497a6641 329 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 28 125 4.7E-11 T 14-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 GYO_2214 a650b87b74e79c733d161d6a497a6641 329 SMART SM00829 11 326 2.0E-12 T 14-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 GYO_2214 a650b87b74e79c733d161d6a497a6641 329 SUPERFAMILY SSF51735 133 304 2.27E-39 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily GYO_1082 c7e6be53e26e6b3a3354c099fe4c6f75 185 ProDom PD033957 LIPOPROTEIN MEMBRANE TRANSMEMBRANE YFJD PALMITATE YFJE PRECURSOR SIGNAL 38 185 2.0E-66 T 14-10-2018 IPR035324 Protein of unknown function DUF5381 GYO_1082 c7e6be53e26e6b3a3354c099fe4c6f75 185 Pfam PF17353 Family of unknown function (DUF5381) 5 172 1.7E-64 T 14-10-2018 IPR035324 Protein of unknown function DUF5381 GYO_4160 58c17ab49c188f70487b2d4e58879458 204 SUPERFAMILY SSF53850 22 183 7.6E-10 T 14-10-2018 GYO_4160 58c17ab49c188f70487b2d4e58879458 204 Gene3D G3DSA:3.40.190.10 112 183 6.6E-5 T 14-10-2018 GYO_4160 58c17ab49c188f70487b2d4e58879458 204 Gene3D G3DSA:3.40.190.10 26 111 6.6E-5 T 14-10-2018 GYO_0639 d0528e313507b4134a99c6d30c71ca98 183 Gene3D G3DSA:3.40.630.30 1 182 1.9E-59 T 14-10-2018 GYO_0639 d0528e313507b4134a99c6d30c71ca98 183 SUPERFAMILY SSF55729 6 176 7.62E-45 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase GYO_0639 d0528e313507b4134a99c6d30c71ca98 183 Pfam PF13302 Acetyltransferase (GNAT) domain 10 151 8.5E-25 T 14-10-2018 IPR000182 GNAT domain GYO_3083 794610553943b315da1eb1a06d0dcbb1 245 Gene3D G3DSA:3.30.230.70 1 245 4.9E-63 T 14-10-2018 IPR027408 PNPase/RNase PH domain superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 GYO_3083 794610553943b315da1eb1a06d0dcbb1 245 SUPERFAMILY SSF55666 153 237 4.06E-24 T 14-10-2018 IPR036345 Exoribonuclease, PH domain 2 superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 GYO_3083 794610553943b315da1eb1a06d0dcbb1 245 SUPERFAMILY SSF54211 1 182 9.62E-45 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold GYO_3083 794610553943b315da1eb1a06d0dcbb1 245 Pfam PF01138 3' exoribonuclease family, domain 1 10 140 2.5E-23 T 14-10-2018 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 GYO_3083 794610553943b315da1eb1a06d0dcbb1 245 ProSitePatterns PS01277 Ribonuclease PH signature. 116 128 - T 14-10-2018 IPR018336 Ribonuclease PH, conserved site GYO_3083 794610553943b315da1eb1a06d0dcbb1 245 TIGRFAM TIGR01966 RNasePH: ribonuclease PH 2 237 2.4E-117 T 14-10-2018 IPR002381 Ribonuclease PH, bacterial-type GO:0000049|GO:0008033|GO:0009022 GYO_3083 794610553943b315da1eb1a06d0dcbb1 245 Hamap MF_00564 Ribonuclease PH [rph]. 11 238 44.441 T 14-10-2018 IPR002381 Ribonuclease PH, bacterial-type GO:0000049|GO:0008033|GO:0009022 GYO_3083 794610553943b315da1eb1a06d0dcbb1 245 Pfam PF03725 3' exoribonuclease family, domain 2 159 225 3.1E-9 T 14-10-2018 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 GYO_0431 64dcfcd6af6087e1f931cbd180548bbe 322 SMART SM00450 115 216 3.0E-20 T 14-10-2018 IPR001763 Rhodanese-like domain GYO_0431 64dcfcd6af6087e1f931cbd180548bbe 322 Gene3D G3DSA:3.30.70.100 1 97 4.3E-32 T 14-10-2018 GYO_0431 64dcfcd6af6087e1f931cbd180548bbe 322 Pfam PF12368 Rhodanase C-terminal 222 288 9.6E-14 T 14-10-2018 IPR022111 Rhodanase, C-terminal GYO_0431 64dcfcd6af6087e1f931cbd180548bbe 322 Hamap MF_00469 UPF0176 protein YceA [yceA]. 3 267 40.735 T 14-10-2018 IPR020936 Uncharacterised protein family UPF0176 GYO_0431 64dcfcd6af6087e1f931cbd180548bbe 322 SUPERFAMILY SSF52821 90 247 4.94E-34 T 14-10-2018 IPR036873 Rhodanese-like domain superfamily GYO_0431 64dcfcd6af6087e1f931cbd180548bbe 322 Gene3D G3DSA:3.40.250.10 102 250 3.2E-45 T 14-10-2018 IPR036873 Rhodanese-like domain superfamily GYO_0431 64dcfcd6af6087e1f931cbd180548bbe 322 Pfam PF00581 Rhodanese-like domain 117 210 2.2E-11 T 14-10-2018 IPR001763 Rhodanese-like domain GYO_3275 70ab19296d27e9c24ce1b61ba3271c20 344 Pfam PF00356 Bacterial regulatory proteins, lacI family 4 48 4.1E-15 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 GYO_3275 70ab19296d27e9c24ce1b61ba3271c20 344 Pfam PF13377 Periplasmic binding protein-like domain 170 336 1.0E-32 T 14-10-2018 GYO_3275 70ab19296d27e9c24ce1b61ba3271c20 344 Gene3D G3DSA:3.40.50.2300 81 328 1.2E-52 T 14-10-2018 GYO_3275 70ab19296d27e9c24ce1b61ba3271c20 344 Gene3D G3DSA:3.40.50.2300 162 330 1.2E-52 T 14-10-2018 GYO_3275 70ab19296d27e9c24ce1b61ba3271c20 344 SUPERFAMILY SSF53822 78 330 3.73E-48 T 14-10-2018 IPR028082 Periplasmic binding protein-like I GYO_3275 70ab19296d27e9c24ce1b61ba3271c20 344 ProSitePatterns PS00356 LacI-type HTH domain signature. 4 22 - T 14-10-2018 GYO_3275 70ab19296d27e9c24ce1b61ba3271c20 344 SMART SM00354 1 76 2.5E-11 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 GYO_3275 70ab19296d27e9c24ce1b61ba3271c20 344 Gene3D G3DSA:1.10.260.40 1 47 1.1E-15 T 14-10-2018 GYO_3275 70ab19296d27e9c24ce1b61ba3271c20 344 SUPERFAMILY SSF47413 3 49 1.88E-10 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 GYO_2071 870d49707fa303ad6c39efa5d516a0a9 256 SUPERFAMILY SSF52096 2 255 1.66E-43 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily GYO_2071 870d49707fa303ad6c39efa5d516a0a9 256 Pfam PF00378 Enoyl-CoA hydratase/isomerase 10 256 7.4E-83 T 14-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 GYO_2071 870d49707fa303ad6c39efa5d516a0a9 256 Gene3D G3DSA:3.90.226.10 1 256 2.4E-87 T 14-10-2018 GYO_2071 870d49707fa303ad6c39efa5d516a0a9 256 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 101 121 - T 14-10-2018 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824 GYO_1143 c5b70789549d0052018dcf77e30327db 294 Pfam PF14540 Nucleotidyltransferase-like 1 118 5.2E-50 T 14-10-2018 IPR029348 Nucleotidyltransferase-like domain GYO_1143 c5b70789549d0052018dcf77e30327db 294 Gene3D G3DSA:3.30.460.10 1 114 4.1E-45 T 14-10-2018 GYO_1143 c5b70789549d0052018dcf77e30327db 294 Gene3D G3DSA:1.20.120.330 115 232 1.4E-48 T 14-10-2018 GYO_1143 c5b70789549d0052018dcf77e30327db 294 ProDom PD128250 YGXA BH0953 1 279 2.0E-158 T 14-10-2018 GYO_3124 b0ac11f6181127798cd8b3aa16ae964e 313 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 107 301 3.7E-18 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 GYO_3124 b0ac11f6181127798cd8b3aa16ae964e 313 Gene3D G3DSA:1.10.3720.10 68 310 9.4E-63 T 14-10-2018 IPR035906 MetI-like superfamily GYO_3124 b0ac11f6181127798cd8b3aa16ae964e 313 SUPERFAMILY SSF161098 74 301 1.57E-53 T 14-10-2018 IPR035906 MetI-like superfamily GYO_4039 b89ac01370f3c5040c5d8b8634fe2d5a 377 SMART SM00028 335 368 420.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 GYO_4039 b89ac01370f3c5040c5d8b8634fe2d5a 377 SMART SM00028 100 133 69.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 GYO_4039 b89ac01370f3c5040c5d8b8634fe2d5a 377 SMART SM00028 221 254 7.6E-7 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 GYO_4039 b89ac01370f3c5040c5d8b8634fe2d5a 377 SMART SM00028 140 173 330.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 GYO_4039 b89ac01370f3c5040c5d8b8634fe2d5a 377 SMART SM00028 260 293 0.39 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 GYO_4039 b89ac01370f3c5040c5d8b8634fe2d5a 377 SUPERFAMILY SSF48452 188 364 8.01E-17 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 GYO_4039 b89ac01370f3c5040c5d8b8634fe2d5a 377 Pfam PF13424 Tetratricopeptide repeat 222 292 4.0E-8 T 14-10-2018 GYO_4039 b89ac01370f3c5040c5d8b8634fe2d5a 377 Gene3D G3DSA:1.25.40.10 2 377 1.8E-123 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 GYO_4039 b89ac01370f3c5040c5d8b8634fe2d5a 377 SUPERFAMILY SSF48452 101 210 1.38E-7 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 GYO_1864 246b7c0d5444431ce5c59a49051d5897 447 Gene3D G3DSA:3.40.1190.10 51 290 7.4E-92 T 14-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 GYO_1864 246b7c0d5444431ce5c59a49051d5897 447 SUPERFAMILY SSF53244 286 440 3.53E-48 T 14-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 GYO_1864 246b7c0d5444431ce5c59a49051d5897 447 Pfam PF08245 Mur ligase middle domain 60 265 3.0E-57 T 14-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 GYO_1864 246b7c0d5444431ce5c59a49051d5897 447 Gene3D G3DSA:3.40.1390.10 1 50 3.8E-12 T 14-10-2018 GYO_1864 246b7c0d5444431ce5c59a49051d5897 447 Hamap MF_00208 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [murE]. 1 437 32.811 T 14-10-2018 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase GO:0005524|GO:0005737|GO:0008360|GO:0016881|GO:0051301 GYO_1864 246b7c0d5444431ce5c59a49051d5897 447 Pfam PF02875 Mur ligase family, glutamate ligase domain 286 371 1.9E-25 T 14-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 GYO_1864 246b7c0d5444431ce5c59a49051d5897 447 SUPERFAMILY SSF53623 51 285 2.62E-77 T 14-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 GYO_1864 246b7c0d5444431ce5c59a49051d5897 447 SUPERFAMILY SSF63418 1 51 6.67E-12 T 14-10-2018 IPR035911 MurE/MurF, N-terminal GYO_1864 246b7c0d5444431ce5c59a49051d5897 447 Gene3D G3DSA:3.90.190.20 291 447 2.5E-61 T 14-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 GYO_1864 246b7c0d5444431ce5c59a49051d5897 447 TIGRFAM TIGR01085 murE: UDP-N-acetylmuramyl-tripeptide synthetase 1 437 1.6E-175 T 14-10-2018 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase GO:0005524|GO:0005737|GO:0008360|GO:0016881|GO:0051301 GYO_0113 d9a1fa0bbc69dc4ac48294762bea77a9 458 SMART SM00382 90 244 4.4E-9 T 14-10-2018 IPR003593 AAA+ ATPase domain GYO_0113 d9a1fa0bbc69dc4ac48294762bea77a9 458 PRINTS PR01874 DNA repair protein radA signature 213 241 6.3E-95 T 14-10-2018 GYO_0113 d9a1fa0bbc69dc4ac48294762bea77a9 458 PRINTS PR01874 DNA repair protein radA signature 124 141 6.3E-95 T 14-10-2018 GYO_0113 d9a1fa0bbc69dc4ac48294762bea77a9 458 PRINTS PR01874 DNA repair protein radA signature 82 110 6.3E-95 T 14-10-2018 GYO_0113 d9a1fa0bbc69dc4ac48294762bea77a9 458 PRINTS PR01874 DNA repair protein radA signature 10 34 6.3E-95 T 14-10-2018 GYO_0113 d9a1fa0bbc69dc4ac48294762bea77a9 458 PRINTS PR01874 DNA repair protein radA signature 322 345 6.3E-95 T 14-10-2018 GYO_0113 d9a1fa0bbc69dc4ac48294762bea77a9 458 PRINTS PR01874 DNA repair protein radA signature 248 274 6.3E-95 T 14-10-2018 GYO_0113 d9a1fa0bbc69dc4ac48294762bea77a9 458 PRINTS PR01874 DNA repair protein radA signature 174 198 6.3E-95 T 14-10-2018 GYO_0113 d9a1fa0bbc69dc4ac48294762bea77a9 458 Pfam PF13481 AAA domain 75 222 5.4E-15 T 14-10-2018 GYO_0113 d9a1fa0bbc69dc4ac48294762bea77a9 458 Gene3D G3DSA:3.30.230.10 296 456 7.0E-21 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup GYO_0113 d9a1fa0bbc69dc4ac48294762bea77a9 458 SUPERFAMILY SSF52540 67 291 6.48E-50 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase GYO_0113 d9a1fa0bbc69dc4ac48294762bea77a9 458 SUPERFAMILY SSF54211 255 454 1.25E-43 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold GYO_0113 d9a1fa0bbc69dc4ac48294762bea77a9 458 Hamap MF_01498 DNA repair protein RadA [radA]. 21 456 45.84 T 14-10-2018 IPR004504 DNA repair protein RadA GO:0003684|GO:0005524|GO:0006281 GYO_0113 d9a1fa0bbc69dc4ac48294762bea77a9 458 Gene3D G3DSA:3.40.50.300 64 285 4.7E-42 T 14-10-2018 GYO_0113 d9a1fa0bbc69dc4ac48294762bea77a9 458 TIGRFAM TIGR00416 sms: DNA repair protein RadA 1 452 6.1E-234 T 14-10-2018 IPR004504 DNA repair protein RadA GO:0003684|GO:0005524|GO:0006281 GYO_0113 d9a1fa0bbc69dc4ac48294762bea77a9 458 Pfam PF13541 Subunit ChlI of Mg-chelatase 366 430 5.9E-10 T 14-10-2018 GYO_0607 f2a22f2a65d34932c1d2270579dd69eb 462 Gene3D G3DSA:3.40.605.10 4 452 7.2E-183 T 14-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 GYO_0607 f2a22f2a65d34932c1d2270579dd69eb 462 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 259 270 - T 14-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 GYO_0607 f2a22f2a65d34932c1d2270579dd69eb 462 Pfam PF00171 Aldehyde dehydrogenase family 5 457 8.0E-175 T 14-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 GYO_0607 f2a22f2a65d34932c1d2270579dd69eb 462 PIRSF PIRSF036492 13 459 5.1E-88 T 14-10-2018 IPR012394 Aldehyde dehydrogenase NAD(P)-dependent GO:0006081|GO:0055114 GYO_0607 f2a22f2a65d34932c1d2270579dd69eb 462 TIGRFAM TIGR01780 SSADH: succinate-semialdehyde dehydrogenase 7 456 8.7E-234 T 14-10-2018 IPR010102 Succinate semialdehyde dehydrogenase GO:0009013|GO:0009450|GO:0055114 Reactome: R-HSA-916853 GYO_0607 f2a22f2a65d34932c1d2270579dd69eb 462 SUPERFAMILY SSF53720 4 460 4.58E-172 T 14-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 GYO_0607 f2a22f2a65d34932c1d2270579dd69eb 462 Gene3D G3DSA:3.40.309.10 238 430 7.2E-183 T 14-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 GYO_1079 a2f89c22fc92f64d9c4ddb5b1103160d 617 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 516 525 - T 14-10-2018 IPR025944 Sigma-54 interaction domain, conserved site GYO_1079 a2f89c22fc92f64d9c4ddb5b1103160d 617 Gene3D G3DSA:1.10.8.60 479 551 1.9E-11 T 14-10-2018 GYO_1079 a2f89c22fc92f64d9c4ddb5b1103160d 617 SUPERFAMILY SSF55781 77 215 6.08E-6 T 14-10-2018 GYO_1079 a2f89c22fc92f64d9c4ddb5b1103160d 617 SUPERFAMILY SSF46689 516 613 2.0E-10 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 GYO_1079 a2f89c22fc92f64d9c4ddb5b1103160d 617 SUPERFAMILY SSF52540 306 538 4.42E-63 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase GYO_1079 a2f89c22fc92f64d9c4ddb5b1103160d 617 Pfam PF02954 Bacterial regulatory protein, Fis family 571 611 1.5E-13 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 GYO_1079 a2f89c22fc92f64d9c4ddb5b1103160d 617 Gene3D G3DSA:3.40.50.300 292 478 1.7E-63 T 14-10-2018 GYO_1079 a2f89c22fc92f64d9c4ddb5b1103160d 617 Gene3D G3DSA:1.10.10.60 569 617 2.6E-12 T 14-10-2018 GYO_1079 a2f89c22fc92f64d9c4ddb5b1103160d 617 Pfam PF00158 Sigma-54 interaction domain 307 475 3.1E-65 T 14-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 GYO_1079 a2f89c22fc92f64d9c4ddb5b1103160d 617 SMART SM00382 327 471 7.2E-11 T 14-10-2018 IPR003593 AAA+ ATPase domain GYO_1079 a2f89c22fc92f64d9c4ddb5b1103160d 617 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 577 594 7.9E-9 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 GYO_1079 a2f89c22fc92f64d9c4ddb5b1103160d 617 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 594 614 7.9E-9 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 GYO_1079 a2f89c22fc92f64d9c4ddb5b1103160d 617 Pfam PF01590 GAF domain 101 214 3.5E-6 T 14-10-2018 IPR003018 GAF domain GO:0005515 GYO_1079 a2f89c22fc92f64d9c4ddb5b1103160d 617 Gene3D G3DSA:3.30.450.40 30 216 2.9E-59 T 14-10-2018 IPR029016 GAF-like domain superfamily GYO_2937 f75f9f43e9654b107901e15da93de3ea 675 SUPERFAMILY SSF49899 349 513 4.22E-40 T 14-10-2018 IPR013320 Concanavalin A-like lectin/glucanase domain superfamily GYO_2937 f75f9f43e9654b107901e15da93de3ea 675 SMART SM00640 39 473 3.6E-188 T 14-10-2018 IPR001362 Glycoside hydrolase, family 32 GO:0004553|GO:0005975 GYO_2937 f75f9f43e9654b107901e15da93de3ea 675 Gene3D G3DSA:2.115.10.20 29 357 3.1E-135 T 14-10-2018 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily GYO_2937 f75f9f43e9654b107901e15da93de3ea 675 Gene3D G3DSA:2.60.120.560 358 511 8.0E-51 T 14-10-2018 GYO_2937 f75f9f43e9654b107901e15da93de3ea 675 Gene3D G3DSA:2.60.120.560 514 674 4.0E-49 T 14-10-2018 GYO_2937 f75f9f43e9654b107901e15da93de3ea 675 SUPERFAMILY SSF75005 29 350 3.45E-114 T 14-10-2018 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily GYO_2937 f75f9f43e9654b107901e15da93de3ea 675 Pfam PF00251 Glycosyl hydrolases family 32 N-terminal domain 39 349 1.1E-107 T 14-10-2018 IPR013148 Glycosyl hydrolase family 32, N-terminal GYO_2937 f75f9f43e9654b107901e15da93de3ea 675 Pfam PF08244 Glycosyl hydrolases family 32 C terminal 352 508 4.9E-43 T 14-10-2018 IPR013189 Glycosyl hydrolase family 32, C-terminal GYO_2937 f75f9f43e9654b107901e15da93de3ea 675 ProSitePatterns PS00609 Glycosyl hydrolases family 32 active site. 39 52 - T 14-10-2018 IPR018053 Glycoside hydrolase, family 32, active site GO:0004553|GO:0005975 KEGG: 00052+3.2.1.26|KEGG: 00500+3.2.1.26 GYO_2717 4f33e0ee7712dbd9f3794d3cacf640c3 362 Pfam PF08669 Glycine cleavage T-protein C-terminal barrel domain 266 356 1.5E-28 T 14-10-2018 IPR013977 Glycine cleavage T-protein, C-terminal barrel domain KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 GYO_2717 4f33e0ee7712dbd9f3794d3cacf640c3 362 PIRSF PIRSF006487 1 362 5.0E-107 T 14-10-2018 IPR028896 Aminomethyltransferase-like KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10|Reactome: R-HSA-6783984 GYO_2717 4f33e0ee7712dbd9f3794d3cacf640c3 362 Hamap MF_00259 Aminomethyltransferase [gcvT]. 1 362 48.756 T 14-10-2018 IPR022903 Glycine cleavage system T protein, bacteria GO:0004047|GO:0006546 KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 GYO_2717 4f33e0ee7712dbd9f3794d3cacf640c3 362 Gene3D G3DSA:3.30.70.1400 51 136 2.6E-95 T 14-10-2018 GYO_2717 4f33e0ee7712dbd9f3794d3cacf640c3 362 Gene3D G3DSA:3.30.1360.120 4 235 2.6E-95 T 14-10-2018 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 GO:0005515 GYO_2717 4f33e0ee7712dbd9f3794d3cacf640c3 362 Gene3D G3DSA:4.10.1250.10 236 279 1.0E-17 T 14-10-2018 GYO_2717 4f33e0ee7712dbd9f3794d3cacf640c3 362 Gene3D G3DSA:2.40.30.110 280 362 3.1E-34 T 14-10-2018 GYO_2717 4f33e0ee7712dbd9f3794d3cacf640c3 362 SUPERFAMILY SSF101790 273 361 1.44E-27 T 14-10-2018 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal GYO_2717 4f33e0ee7712dbd9f3794d3cacf640c3 362 SUPERFAMILY SSF103025 2 281 4.49E-102 T 14-10-2018 GYO_2717 4f33e0ee7712dbd9f3794d3cacf640c3 362 TIGRFAM TIGR00528 gcvT: glycine cleavage system T protein 2 362 5.6E-172 T 14-10-2018 IPR006223 Glycine cleavage system T protein GO:0004047|GO:0006546 KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10|Reactome: R-HSA-6783984 GYO_2717 4f33e0ee7712dbd9f3794d3cacf640c3 362 Pfam PF01571 Aminomethyltransferase folate-binding domain 7 258 2.7E-95 T 14-10-2018 IPR006222 Aminomethyltransferase, folate-binding domain GYO_0122 02eeebc20a288d2ea4b149d19299b6b0 466 SUPERFAMILY SSF52374 4 312 6.17E-102 T 14-10-2018 GYO_0122 02eeebc20a288d2ea4b149d19299b6b0 466 TIGRFAM TIGR00435 cysS: cysteine--tRNA ligase 3 464 2.6E-202 T 14-10-2018 IPR015803 Cysteine-tRNA ligase GO:0004817|GO:0005524|GO:0006423 KEGG: 00970+6.1.1.16 GYO_0122 02eeebc20a288d2ea4b149d19299b6b0 466 Hamap MF_00041 Cysteine--tRNA ligase [cysS]. 3 465 39.098 T 14-10-2018 IPR015803 Cysteine-tRNA ligase GO:0004817|GO:0005524|GO:0006423 KEGG: 00970+6.1.1.16 GYO_0122 02eeebc20a288d2ea4b149d19299b6b0 466 Pfam PF01406 tRNA synthetases class I (C) catalytic domain 16 313 1.0E-140 T 14-10-2018 IPR032678 tRNA synthetases class I, catalytic domain KEGG: 00970+6.1.1.16 GYO_0122 02eeebc20a288d2ea4b149d19299b6b0 466 SUPERFAMILY SSF47323 334 464 2.32E-36 T 14-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 GYO_0122 02eeebc20a288d2ea4b149d19299b6b0 466 Gene3D G3DSA:1.20.120.640 306 464 7.9E-37 T 14-10-2018 GYO_0122 02eeebc20a288d2ea4b149d19299b6b0 466 Pfam PF09190 DALR domain 353 410 2.5E-16 T 14-10-2018 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR GO:0000166|GO:0004817|GO:0005524|GO:0005737|GO:0006423 KEGG: 00970+6.1.1.16 GYO_0122 02eeebc20a288d2ea4b149d19299b6b0 466 SMART SM00840 353 420 1.0E-17 T 14-10-2018 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR GO:0000166|GO:0004817|GO:0005524|GO:0005737|GO:0006423 KEGG: 00970+6.1.1.16 GYO_0122 02eeebc20a288d2ea4b149d19299b6b0 466 Gene3D G3DSA:3.40.50.620 1 305 3.4E-134 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold GYO_0122 02eeebc20a288d2ea4b149d19299b6b0 466 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 222 243 4.9E-30 T 14-10-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 GYO_0122 02eeebc20a288d2ea4b149d19299b6b0 466 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 26 37 4.9E-30 T 14-10-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 GYO_0122 02eeebc20a288d2ea4b149d19299b6b0 466 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 62 71 4.9E-30 T 14-10-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 GYO_0122 02eeebc20a288d2ea4b149d19299b6b0 466 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 191 209 4.9E-30 T 14-10-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 GYO_2568 909b24291a1e2950f1dc1b06f136c95b 70 Pfam PF10676 Spore germination protein gerPA/gerPF 4 67 5.4E-19 T 14-10-2018 IPR019618 Spore germination protein GerPA/GerPF GYO_4374 047ccd56507576e4e61a3f8b58700d78 290 SUPERFAMILY SSF51569 1 284 4.69E-97 T 14-10-2018 GYO_4374 047ccd56507576e4e61a3f8b58700d78 290 TIGRFAM TIGR00167 cbbA: ketose-bisphosphate aldolase 1 284 1.5E-114 T 14-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 GYO_4374 047ccd56507576e4e61a3f8b58700d78 290 TIGRFAM TIGR01859 fruc_bis_ald_: fructose-1,6-bisphosphate aldolase, class II 3 284 6.5E-129 T 14-10-2018 IPR011289 Fructose-1,6-bisphosphate aldolase, class 2 GO:0004332|GO:0006096|GO:0008270|GO:0030388 KEGG: 00010+4.1.2.13|KEGG: 00030+4.1.2.13|KEGG: 00051+4.1.2.13|KEGG: 00680+4.1.2.13|KEGG: 00710+4.1.2.13|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7385 GYO_4374 047ccd56507576e4e61a3f8b58700d78 290 ProSitePatterns PS00602 Fructose-bisphosphate aldolase class-II signature 1. 74 87 - T 14-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 GYO_4374 047ccd56507576e4e61a3f8b58700d78 290 Pfam PF01116 Fructose-bisphosphate aldolase class-II 4 283 6.7E-97 T 14-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 GYO_4374 047ccd56507576e4e61a3f8b58700d78 290 Gene3D G3DSA:3.20.20.70 1 289 6.1E-107 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 GYO_4374 047ccd56507576e4e61a3f8b58700d78 290 PIRSF PIRSF001359 1 284 1.5E-121 T 14-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 GYO_4374 047ccd56507576e4e61a3f8b58700d78 290 ProSitePatterns PS00806 Fructose-bisphosphate aldolase class-II signature 2. 134 145 - T 14-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 GYO_3600 d12fbf3e8440f176a27b035be0af944b 602 Gene3D G3DSA:1.10.1370.20 227 601 1.2E-113 T 14-10-2018 GYO_3600 d12fbf3e8440f176a27b035be0af944b 602 Pfam PF01432 Peptidase family M3 204 580 2.2E-20 T 14-10-2018 IPR001567 Peptidase M3A/M3B catalytic domain GO:0004222|GO:0006508 GYO_3600 d12fbf3e8440f176a27b035be0af944b 602 SUPERFAMILY SSF55486 8 582 4.31E-94 T 14-10-2018 GYO_3600 d12fbf3e8440f176a27b035be0af944b 602 Gene3D G3DSA:1.20.140.70 21 178 1.9E-7 T 14-10-2018 GYO_3600 d12fbf3e8440f176a27b035be0af944b 602 TIGRFAM TIGR02290 M3_fam_3: oligoendopeptidase, pepF/M3 family 9 595 5.6E-199 T 14-10-2018 IPR011977 Peptidase M3B, oligoendopeptidase-related clade 3 GYO_3600 d12fbf3e8440f176a27b035be0af944b 602 Pfam PF08439 Oligopeptidase F 117 183 4.2E-9 T 14-10-2018 IPR013647 Oligopeptidase F, N-terminal domain GYO_4059 1143fd55cb44aa9d9e88ca3ffa344cbe 170 TIGRFAM TIGR01144 ATP_synt_b: ATP synthase F0, B subunit 20 166 3.7E-51 T 14-10-2018 IPR005864 ATP synthase, F0 complex, subunit b, bacterial GO:0015078|GO:0015986|GO:0045263 GYO_4059 1143fd55cb44aa9d9e88ca3ffa344cbe 170 Hamap MF_01398 ATP synthase subunit b [atpF]. 10 148 13.431 T 14-10-2018 IPR002146 ATP synthase, F0 complex, subunit b/b', bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 GYO_4059 1143fd55cb44aa9d9e88ca3ffa344cbe 170 Pfam PF00430 ATP synthase B/B' CF(0) 17 147 6.3E-37 T 14-10-2018 IPR002146 ATP synthase, F0 complex, subunit b/b', bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 GYO_4059 1143fd55cb44aa9d9e88ca3ffa344cbe 170 SUPERFAMILY SSF81573 74 131 6.93E-10 T 14-10-2018 IPR028987 F-type ATP synthase subunit B-like, membrane domain superfamily GYO_2300 df649893fd9edc527d5ea63f8a6f92b4 474 Gene3D G3DSA:1.10.405.10 117 220 2.0E-108 T 14-10-2018 GYO_2300 df649893fd9edc527d5ea63f8a6f92b4 474 Gene3D G3DSA:3.90.660.10 59 410 2.0E-108 T 14-10-2018 GYO_2300 df649893fd9edc527d5ea63f8a6f92b4 474 Gene3D G3DSA:3.50.50.60 21 422 2.0E-108 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily GYO_2300 df649893fd9edc527d5ea63f8a6f92b4 474 Gene3D G3DSA:1.10.10.1620 429 473 4.2E-20 T 14-10-2018 GYO_2300 df649893fd9edc527d5ea63f8a6f92b4 474 PRINTS PR00757 Flavin-containing amine oxidase signature 21 40 2.4E-9 T 14-10-2018 IPR001613 Flavin amine oxidase GO:0016491|GO:0055114 GYO_2300 df649893fd9edc527d5ea63f8a6f92b4 474 PRINTS PR00757 Flavin-containing amine oxidase signature 402 421 2.4E-9 T 14-10-2018 IPR001613 Flavin amine oxidase GO:0016491|GO:0055114 GYO_2300 df649893fd9edc527d5ea63f8a6f92b4 474 PRINTS PR00757 Flavin-containing amine oxidase signature 315 334 2.4E-9 T 14-10-2018 IPR001613 Flavin amine oxidase GO:0016491|GO:0055114 GYO_2300 df649893fd9edc527d5ea63f8a6f92b4 474 PRINTS PR00757 Flavin-containing amine oxidase signature 452 469 2.4E-9 T 14-10-2018 IPR001613 Flavin amine oxidase GO:0016491|GO:0055114 GYO_2300 df649893fd9edc527d5ea63f8a6f92b4 474 SUPERFAMILY SSF54373 311 421 1.05E-32 T 14-10-2018 GYO_2300 df649893fd9edc527d5ea63f8a6f92b4 474 SUPERFAMILY SSF51905 19 472 1.72E-59 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily GYO_2300 df649893fd9edc527d5ea63f8a6f92b4 474 Pfam PF01593 Flavin containing amine oxidoreductase 29 470 3.0E-74 T 14-10-2018 IPR002937 Amine oxidase GO:0016491|GO:0055114 GYO_0753 c4cd28dc680fe0379a58bdf2aab9e5fd 463 Pfam PF00392 Bacterial regulatory proteins, gntR family 15 77 1.3E-14 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 GYO_0753 c4cd28dc680fe0379a58bdf2aab9e5fd 463 Gene3D G3DSA:1.10.10.10 5 78 1.5E-19 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily GYO_0753 c4cd28dc680fe0379a58bdf2aab9e5fd 463 SUPERFAMILY SSF53383 80 462 2.38E-78 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase GYO_0753 c4cd28dc680fe0379a58bdf2aab9e5fd 463 Pfam PF00155 Aminotransferase class I and II 120 455 8.2E-11 T 14-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 GYO_0753 c4cd28dc680fe0379a58bdf2aab9e5fd 463 Gene3D G3DSA:3.40.640.10 93 456 4.5E-119 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 GYO_0753 c4cd28dc680fe0379a58bdf2aab9e5fd 463 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 52 68 1.7E-6 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 GYO_0753 c4cd28dc680fe0379a58bdf2aab9e5fd 463 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 38 52 1.7E-6 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 GYO_0753 c4cd28dc680fe0379a58bdf2aab9e5fd 463 SMART SM00345 19 78 1.7E-12 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 GYO_0753 c4cd28dc680fe0379a58bdf2aab9e5fd 463 SUPERFAMILY SSF46785 9 82 3.4E-17 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily GYO_1010 6e217fef0b71354f63b1ac6aabdf5168 339 SUPERFAMILY SSF50129 285 334 1.58E-6 T 14-10-2018 IPR011032 GroES-like superfamily GYO_1010 6e217fef0b71354f63b1ac6aabdf5168 339 SUPERFAMILY SSF50129 4 142 2.99E-35 T 14-10-2018 IPR011032 GroES-like superfamily GYO_1010 6e217fef0b71354f63b1ac6aabdf5168 339 SMART SM00829 18 333 5.3E-6 T 14-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 GYO_1010 6e217fef0b71354f63b1ac6aabdf5168 339 Pfam PF00107 Zinc-binding dehydrogenase 157 294 1.4E-22 T 14-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 GYO_1010 6e217fef0b71354f63b1ac6aabdf5168 339 Gene3D G3DSA:3.40.50.720 125 304 6.8E-130 T 14-10-2018 GYO_1010 6e217fef0b71354f63b1ac6aabdf5168 339 Gene3D G3DSA:3.90.180.10 10 333 6.8E-130 T 14-10-2018 GYO_1010 6e217fef0b71354f63b1ac6aabdf5168 339 SUPERFAMILY SSF51735 123 300 2.98E-48 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily GYO_1010 6e217fef0b71354f63b1ac6aabdf5168 339 Pfam PF16884 N-terminal domain of oxidoreductase 7 111 1.6E-33 T 14-10-2018 GYO_4554 d756a94cf1241f6f01771a7c64195166 1059 SUPERFAMILY SSF82693 54 146 1.73E-20 T 14-10-2018 GYO_4554 d756a94cf1241f6f01771a7c64195166 1059 Gene3D G3DSA:3.30.2090.10 190 309 1.7E-269 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains GYO_4554 d756a94cf1241f6f01771a7c64195166 1059 Gene3D G3DSA:3.30.70.1430 597 690 1.7E-269 T 14-10-2018 GYO_4554 d756a94cf1241f6f01771a7c64195166 1059 Gene3D G3DSA:3.30.70.1430 54 836 1.7E-269 T 14-10-2018 GYO_4554 d756a94cf1241f6f01771a7c64195166 1059 SUPERFAMILY SSF82714 199 261 6.28E-5 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains GYO_4554 d756a94cf1241f6f01771a7c64195166 1059 Gene3D G3DSA:1.20.1640.10 24 544 1.7E-269 T 14-10-2018 GYO_4554 d756a94cf1241f6f01771a7c64195166 1059 Gene3D G3DSA:3.30.70.1440 691 885 1.7E-269 T 14-10-2018 GYO_4554 d756a94cf1241f6f01771a7c64195166 1059 Gene3D G3DSA:3.30.70.1320 146 365 1.7E-269 T 14-10-2018 GYO_4554 d756a94cf1241f6f01771a7c64195166 1059 Pfam PF00873 AcrB/AcrD/AcrF family 18 1046 2.8E-207 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 GYO_4554 d756a94cf1241f6f01771a7c64195166 1059 Gene3D G3DSA:3.30.2090.10 740 828 1.7E-269 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains GYO_4554 d756a94cf1241f6f01771a7c64195166 1059 PRINTS PR00702 Acriflavin resistance protein family signature 369 392 9.1E-48 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 GYO_4554 d756a94cf1241f6f01771a7c64195166 1059 PRINTS PR00702 Acriflavin resistance protein family signature 24 48 9.1E-48 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 GYO_4554 d756a94cf1241f6f01771a7c64195166 1059 PRINTS PR00702 Acriflavin resistance protein family signature 52 70 9.1E-48 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 GYO_4554 d756a94cf1241f6f01771a7c64195166 1059 PRINTS PR00702 Acriflavin resistance protein family signature 396 417 9.1E-48 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 GYO_4554 d756a94cf1241f6f01771a7c64195166 1059 PRINTS PR00702 Acriflavin resistance protein family signature 424 448 9.1E-48 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 GYO_4554 d756a94cf1241f6f01771a7c64195166 1059 PRINTS PR00702 Acriflavin resistance protein family signature 582 599 9.1E-48 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 GYO_4554 d756a94cf1241f6f01771a7c64195166 1059 PRINTS PR00702 Acriflavin resistance protein family signature 480 503 9.1E-48 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 GYO_4554 d756a94cf1241f6f01771a7c64195166 1059 PRINTS PR00702 Acriflavin resistance protein family signature 505 528 9.1E-48 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 GYO_4554 d756a94cf1241f6f01771a7c64195166 1059 SUPERFAMILY SSF82866 829 1052 1.19E-47 T 14-10-2018 GYO_4554 d756a94cf1241f6f01771a7c64195166 1059 Gene3D G3DSA:1.20.1640.10 545 1043 1.7E-269 T 14-10-2018 GYO_4554 d756a94cf1241f6f01771a7c64195166 1059 SUPERFAMILY SSF82693 147 351 2.09E-16 T 14-10-2018 GYO_4554 d756a94cf1241f6f01771a7c64195166 1059 SUPERFAMILY SSF82866 330 531 3.27E-44 T 14-10-2018 GYO_4554 d756a94cf1241f6f01771a7c64195166 1059 SUPERFAMILY SSF82714 743 826 2.62E-13 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains GYO_2476 2deca12f5eb57fe1835e220d761f3fe5 267 Pfam PF05173 Dihydrodipicolinate reductase, C-terminus 132 265 1.8E-33 T 14-10-2018 IPR022663 Dihydrodipicolinate reductase, C-terminal GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 GYO_2476 2deca12f5eb57fe1835e220d761f3fe5 267 PIRSF PIRSF000161 4 267 2.7E-71 T 14-10-2018 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 GYO_2476 2deca12f5eb57fe1835e220d761f3fe5 267 SUPERFAMILY SSF55347 130 238 2.4E-38 T 14-10-2018 GYO_2476 2deca12f5eb57fe1835e220d761f3fe5 267 Hamap MF_00102 4-hydroxy-tetrahydrodipicolinate reductase [dapB]. 6 267 30.66 T 14-10-2018 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 GYO_2476 2deca12f5eb57fe1835e220d761f3fe5 267 Gene3D G3DSA:3.40.50.720 7 264 1.8E-76 T 14-10-2018 GYO_2476 2deca12f5eb57fe1835e220d761f3fe5 267 SUPERFAMILY SSF51735 4 156 1.92E-35 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily GYO_2476 2deca12f5eb57fe1835e220d761f3fe5 267 TIGRFAM TIGR00036 dapB: 4-hydroxy-tetrahydrodipicolinate reductase 5 267 7.3E-99 T 14-10-2018 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 GYO_2476 2deca12f5eb57fe1835e220d761f3fe5 267 ProSitePatterns PS01298 Dihydrodipicolinate reductase signature. 151 168 - T 14-10-2018 IPR022664 Dihydrodipicolinate reductase, conserved site GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 GYO_2476 2deca12f5eb57fe1835e220d761f3fe5 267 Pfam PF01113 Dihydrodipicolinate reductase, N-terminus 6 129 1.8E-30 T 14-10-2018 IPR000846 Dihydrodipicolinate reductase, N-terminal GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 GYO_2476 2deca12f5eb57fe1835e220d761f3fe5 267 Gene3D G3DSA:3.30.360.10 131 236 1.8E-76 T 14-10-2018 GYO_2660 ea1885d02a9d4dbc2a1d6583c3608281 379 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 120 214 3.2E-27 T 14-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 GYO_2660 ea1885d02a9d4dbc2a1d6583c3608281 379 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 227 375 2.4E-54 T 14-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 GYO_2660 ea1885d02a9d4dbc2a1d6583c3608281 379 Gene3D G3DSA:1.10.540.10 1 117 3.6E-43 T 14-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 GYO_2660 ea1885d02a9d4dbc2a1d6583c3608281 379 ProSitePatterns PS00072 Acyl-CoA dehydrogenases signature 1. 122 134 - T 14-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 GYO_2660 ea1885d02a9d4dbc2a1d6583c3608281 379 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 334 353 - T 14-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 GYO_2660 ea1885d02a9d4dbc2a1d6583c3608281 379 Gene3D G3DSA:1.20.140.10 234 378 2.9E-58 T 14-10-2018 GYO_2660 ea1885d02a9d4dbc2a1d6583c3608281 379 Gene3D G3DSA:2.40.110.10 119 233 1.3E-43 T 14-10-2018 GYO_2660 ea1885d02a9d4dbc2a1d6583c3608281 379 SUPERFAMILY SSF56645 3 238 5.1E-86 T 14-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 GYO_2660 ea1885d02a9d4dbc2a1d6583c3608281 379 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 4 116 2.0E-38 T 14-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 GYO_2660 ea1885d02a9d4dbc2a1d6583c3608281 379 PIRSF PIRSF016578 2 105 2.0E-4 T 14-10-2018 GYO_2660 ea1885d02a9d4dbc2a1d6583c3608281 379 PIRSF PIRSF016578 129 377 4.2E-18 T 14-10-2018 GYO_2660 ea1885d02a9d4dbc2a1d6583c3608281 379 SUPERFAMILY SSF47203 225 378 4.67E-62 T 14-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 GYO_3586 88538b478712323a1892b08e2bd085a4 789 SUPERFAMILY SSF52096 481 786 3.55E-41 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily GYO_3586 88538b478712323a1892b08e2bd085a4 789 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 208 306 1.2E-10 T 14-10-2018 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 GYO_3586 88538b478712323a1892b08e2bd085a4 789 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 374 411 1.6E-4 T 14-10-2018 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 GYO_3586 88538b478712323a1892b08e2bd085a4 789 Pfam PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 7 205 3.9E-44 T 14-10-2018 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 GYO_3586 88538b478712323a1892b08e2bd085a4 789 SUPERFAMILY SSF48179 357 456 8.25E-18 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 GYO_3586 88538b478712323a1892b08e2bd085a4 789 Gene3D G3DSA:3.90.226.10 485 688 1.6E-31 T 14-10-2018 GYO_3586 88538b478712323a1892b08e2bd085a4 789 Gene3D G3DSA:1.10.1040.10 209 331 1.3E-17 T 14-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 GYO_3586 88538b478712323a1892b08e2bd085a4 789 SUPERFAMILY SSF51735 4 206 6.62E-42 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily GYO_3586 88538b478712323a1892b08e2bd085a4 789 Pfam PF00378 Enoyl-CoA hydratase/isomerase 490 668 4.0E-14 T 14-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 GYO_3586 88538b478712323a1892b08e2bd085a4 789 Gene3D G3DSA:1.10.1040.10 367 435 2.4E-8 T 14-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 GYO_3586 88538b478712323a1892b08e2bd085a4 789 Gene3D G3DSA:3.40.50.720 1 208 9.4E-64 T 14-10-2018 GYO_3586 88538b478712323a1892b08e2bd085a4 789 SUPERFAMILY SSF48179 206 326 2.55E-20 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 GYO_4371 b3dcd46086b5752935d2818d0d23ecb0 257 SUPERFAMILY SSF52540 4 224 8.3E-66 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase GYO_4371 b3dcd46086b5752935d2818d0d23ecb0 257 Gene3D G3DSA:3.40.50.300 1 251 5.9E-66 T 14-10-2018 GYO_4371 b3dcd46086b5752935d2818d0d23ecb0 257 Pfam PF00005 ABC transporter 23 171 8.5E-35 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 GYO_4371 b3dcd46086b5752935d2818d0d23ecb0 257 SMART SM00382 32 220 1.4E-12 T 14-10-2018 IPR003593 AAA+ ATPase domain GYO_4371 b3dcd46086b5752935d2818d0d23ecb0 257 ProSitePatterns PS00211 ABC transporters family signature. 144 158 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 GYO_2104 c78e9efb84daf9e72aba70aacfe0aa53 421 Gene3D G3DSA:3.40.640.10 58 272 3.0E-183 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 GYO_2104 c78e9efb84daf9e72aba70aacfe0aa53 421 Pfam PF06838 Methionine gamma-lyase 13 415 2.9E-212 T 14-10-2018 IPR009651 Putative methionine gamma-lyase GYO_2104 c78e9efb84daf9e72aba70aacfe0aa53 421 SUPERFAMILY SSF53383 56 399 5.1E-49 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase GYO_2104 c78e9efb84daf9e72aba70aacfe0aa53 421 Gene3D G3DSA:3.90.1150.60 17 412 3.0E-183 T 14-10-2018 GYO_0685 c333aee2f104c3de0d33e7bbde318b97 389 SMART SM01005 245 370 8.6E-65 T 14-10-2018 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 GYO_0685 c333aee2f104c3de0d33e7bbde318b97 389 Pfam PF01168 Alanine racemase, N-terminal domain 14 230 1.1E-68 T 14-10-2018 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 GYO_0685 c333aee2f104c3de0d33e7bbde318b97 389 Gene3D G3DSA:2.40.37.10 14 367 1.3E-130 T 14-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 GYO_0685 c333aee2f104c3de0d33e7bbde318b97 389 Pfam PF00842 Alanine racemase, C-terminal domain 245 368 4.8E-42 T 14-10-2018 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 GYO_0685 c333aee2f104c3de0d33e7bbde318b97 389 Hamap MF_01201 Alanine racemase. 7 370 34.921 T 14-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 GYO_0685 c333aee2f104c3de0d33e7bbde318b97 389 SUPERFAMILY SSF50621 240 380 2.27E-49 T 14-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 GYO_0685 c333aee2f104c3de0d33e7bbde318b97 389 ProSitePatterns PS00395 Alanine racemase pyridoxal-phosphate attachment site. 38 48 - T 14-10-2018 IPR020622 Alanine racemase, pyridoxal-phosphate attachment site KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 GYO_0685 c333aee2f104c3de0d33e7bbde318b97 389 Gene3D G3DSA:3.20.20.10 16 234 1.3E-130 T 14-10-2018 IPR029066 PLP-binding barrel GYO_0685 c333aee2f104c3de0d33e7bbde318b97 389 PRINTS PR00992 Alanine racemase signature 261 276 5.7E-72 T 14-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 GYO_0685 c333aee2f104c3de0d33e7bbde318b97 389 PRINTS PR00992 Alanine racemase signature 69 87 5.7E-72 T 14-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 GYO_0685 c333aee2f104c3de0d33e7bbde318b97 389 PRINTS PR00992 Alanine racemase signature 33 49 5.7E-72 T 14-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 GYO_0685 c333aee2f104c3de0d33e7bbde318b97 389 PRINTS PR00992 Alanine racemase signature 163 174 5.7E-72 T 14-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 GYO_0685 c333aee2f104c3de0d33e7bbde318b97 389 PRINTS PR00992 Alanine racemase signature 203 230 5.7E-72 T 14-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 GYO_0685 c333aee2f104c3de0d33e7bbde318b97 389 PRINTS PR00992 Alanine racemase signature 128 140 5.7E-72 T 14-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 GYO_0685 c333aee2f104c3de0d33e7bbde318b97 389 PRINTS PR00992 Alanine racemase signature 352 365 5.7E-72 T 14-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 GYO_0685 c333aee2f104c3de0d33e7bbde318b97 389 PRINTS PR00992 Alanine racemase signature 298 315 5.7E-72 T 14-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 GYO_0685 c333aee2f104c3de0d33e7bbde318b97 389 PRINTS PR00992 Alanine racemase signature 278 293 5.7E-72 T 14-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 GYO_0685 c333aee2f104c3de0d33e7bbde318b97 389 TIGRFAM TIGR00492 alr: alanine racemase 8 370 3.0E-149 T 14-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 GYO_0685 c333aee2f104c3de0d33e7bbde318b97 389 SUPERFAMILY SSF51419 14 245 3.05E-65 T 14-10-2018 IPR029066 PLP-binding barrel GYO_4158 6f602947ef2456db4aeb1708ea5ba0be 253 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 139 167 - T 14-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 GYO_4158 6f602947ef2456db4aeb1708ea5ba0be 253 SUPERFAMILY SSF51735 5 252 1.7E-85 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily GYO_4158 6f602947ef2456db4aeb1708ea5ba0be 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 152 171 1.9E-46 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR GYO_4158 6f602947ef2456db4aeb1708ea5ba0be 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 214 234 1.9E-46 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR GYO_4158 6f602947ef2456db4aeb1708ea5ba0be 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 126 142 1.9E-46 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR GYO_4158 6f602947ef2456db4aeb1708ea5ba0be 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 79 90 1.9E-46 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR GYO_4158 6f602947ef2456db4aeb1708ea5ba0be 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 173 190 1.9E-46 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR GYO_4158 6f602947ef2456db4aeb1708ea5ba0be 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 1.9E-46 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR GYO_4158 6f602947ef2456db4aeb1708ea5ba0be 253 Gene3D G3DSA:3.40.50.720 1 253 2.1E-92 T 14-10-2018 GYO_4158 6f602947ef2456db4aeb1708ea5ba0be 253 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 12 251 7.6E-72 T 14-10-2018 GYO_4158 6f602947ef2456db4aeb1708ea5ba0be 253 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 132 140 2.7E-13 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR GYO_4158 6f602947ef2456db4aeb1708ea5ba0be 253 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 79 90 2.7E-13 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR GYO_4158 6f602947ef2456db4aeb1708ea5ba0be 253 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 152 171 2.7E-13 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR GYO_2789 782ecd177f8ca4b3eac5104597bc8afb 212 Pfam PF00571 CBS domain 147 203 3.6E-5 T 14-10-2018 IPR000644 CBS domain GYO_2789 782ecd177f8ca4b3eac5104597bc8afb 212 Pfam PF00571 CBS domain 80 133 7.8E-7 T 14-10-2018 IPR000644 CBS domain GYO_2789 782ecd177f8ca4b3eac5104597bc8afb 212 SUPERFAMILY SSF46785 5 81 2.1E-14 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily GYO_2789 782ecd177f8ca4b3eac5104597bc8afb 212 SMART SM00116 86 134 0.0012 T 14-10-2018 IPR000644 CBS domain GYO_2789 782ecd177f8ca4b3eac5104597bc8afb 212 SMART SM00116 153 204 0.056 T 14-10-2018 IPR000644 CBS domain GYO_2789 782ecd177f8ca4b3eac5104597bc8afb 212 SUPERFAMILY SSF54631 69 204 1.34E-21 T 14-10-2018 GYO_2789 782ecd177f8ca4b3eac5104597bc8afb 212 Pfam PF08279 HTH domain 9 61 1.1E-12 T 14-10-2018 IPR013196 Helix-turn-helix, type 11 GYO_2789 782ecd177f8ca4b3eac5104597bc8afb 212 Gene3D G3DSA:1.10.10.10 1 63 1.1E-8 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily GYO_2789 782ecd177f8ca4b3eac5104597bc8afb 212 PIRSF PIRSF026546 4 210 1.5E-103 T 14-10-2018 IPR016842 Protein of unknown function UCP026546, HtH-CBS GYO_2789 782ecd177f8ca4b3eac5104597bc8afb 212 Gene3D G3DSA:3.10.580.10 64 212 1.6E-63 T 14-10-2018 GYO_1272 48bb110213d0b6e37d9a09765ea9925d 117 Hamap MF_01526 UPF0342 protein . 2 113 19.09 T 14-10-2018 IPR010368 Control of competence regulator ComK, YlbF/YmcA GYO_1272 48bb110213d0b6e37d9a09765ea9925d 117 SUPERFAMILY SSF158622 3 114 1.83E-38 T 14-10-2018 IPR023378 YheA/YmcA-like domain superfamily GYO_1272 48bb110213d0b6e37d9a09765ea9925d 117 Pfam PF06133 Control of competence regulator ComK, YlbF/YmcA 6 108 1.3E-23 T 14-10-2018 IPR010368 Control of competence regulator ComK, YlbF/YmcA GYO_1272 48bb110213d0b6e37d9a09765ea9925d 117 Gene3D G3DSA:1.20.1500.10 2 113 4.1E-38 T 14-10-2018 IPR023378 YheA/YmcA-like domain superfamily GYO_2962 08ae06bde8420f019cb7354fcf23dc1e 982 Pfam PF00384 Molybdopterin oxidoreductase 322 745 6.3E-86 T 14-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 GYO_2962 08ae06bde8420f019cb7354fcf23dc1e 982 Gene3D G3DSA:3.40.50.740 327 784 1.1E-164 T 14-10-2018 GYO_2962 08ae06bde8420f019cb7354fcf23dc1e 982 SMART SM00926 265 319 9.7E-17 T 14-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 GYO_2962 08ae06bde8420f019cb7354fcf23dc1e 982 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 198 209 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site GYO_2962 08ae06bde8420f019cb7354fcf23dc1e 982 SUPERFAMILY SSF50692 794 940 1.02E-33 T 14-10-2018 IPR009010 Aspartate decarboxylase-like domain superfamily GYO_2962 08ae06bde8420f019cb7354fcf23dc1e 982 Pfam PF12838 4Fe-4S dicluster domain 154 212 2.3E-6 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain GYO_2962 08ae06bde8420f019cb7354fcf23dc1e 982 Pfam PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region 90 127 7.9E-12 T 14-10-2018 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 GYO_2962 08ae06bde8420f019cb7354fcf23dc1e 982 Gene3D G3DSA:2.20.25.90 265 320 4.6E-18 T 14-10-2018 GYO_2962 08ae06bde8420f019cb7354fcf23dc1e 982 TIGRFAM TIGR01591 Fdh-alpha: formate dehydrogenase, alpha subunit 270 938 7.2E-249 T 14-10-2018 IPR006478 Formate dehydrogenase, alpha subunit GO:0008863|GO:0015942|GO:0055114 KEGG: 00630+1.17.1.9|KEGG: 00680+1.17.1.9|MetaCyc: PWY-1881|MetaCyc: PWY-5497|MetaCyc: PWY-6696|MetaCyc: PWY-7985 GYO_2962 08ae06bde8420f019cb7354fcf23dc1e 982 Gene3D G3DSA:2.40.40.20 821 941 1.2E-27 T 14-10-2018 GYO_2962 08ae06bde8420f019cb7354fcf23dc1e 982 Gene3D G3DSA:3.30.70.20 134 216 1.6E-20 T 14-10-2018 GYO_2962 08ae06bde8420f019cb7354fcf23dc1e 982 Pfam PF13510 2Fe-2S iron-sulfur cluster binding domain 7 77 3.9E-14 T 14-10-2018 GYO_2962 08ae06bde8420f019cb7354fcf23dc1e 982 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 266 319 2.0E-17 T 14-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 GYO_2962 08ae06bde8420f019cb7354fcf23dc1e 982 Gene3D G3DSA:3.40.228.10 400 599 1.1E-164 T 14-10-2018 GYO_2962 08ae06bde8420f019cb7354fcf23dc1e 982 SUPERFAMILY SSF54292 9 131 2.56E-30 T 14-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 GYO_2962 08ae06bde8420f019cb7354fcf23dc1e 982 SUPERFAMILY SSF54862 141 222 2.3E-17 T 14-10-2018 GYO_2962 08ae06bde8420f019cb7354fcf23dc1e 982 SMART SM00929 88 129 2.1E-14 T 14-10-2018 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 GYO_2962 08ae06bde8420f019cb7354fcf23dc1e 982 SUPERFAMILY SSF53706 259 789 1.03E-192 T 14-10-2018 GYO_2962 08ae06bde8420f019cb7354fcf23dc1e 982 Pfam PF01568 Molydopterin dinucleotide binding domain 828 935 4.4E-21 T 14-10-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0043546|GO:0055114 GYO_2962 08ae06bde8420f019cb7354fcf23dc1e 982 PIRSF PIRSF036643 4 972 0.0 T 14-10-2018 GYO_2962 08ae06bde8420f019cb7354fcf23dc1e 982 Gene3D G3DSA:3.10.20.740 9 129 3.7E-29 T 14-10-2018 GYO_2338 10886eb6403621eb6a1beafcf71b1e85 417 SUPERFAMILY SSF51230 2 93 5.5E-26 T 14-10-2018 IPR011053 Single hybrid motif GYO_2338 10886eb6403621eb6a1beafcf71b1e85 417 Pfam PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 187 415 3.4E-79 T 14-10-2018 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain GO:0016746 Reactome: R-HSA-389661 GYO_2338 10886eb6403621eb6a1beafcf71b1e85 417 Gene3D G3DSA:3.30.559.10 186 416 5.7E-89 T 14-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 GYO_2338 10886eb6403621eb6a1beafcf71b1e85 417 SUPERFAMILY SSF47005 116 160 1.83E-9 T 14-10-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 GYO_2338 10886eb6403621eb6a1beafcf71b1e85 417 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 26 55 - T 14-10-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 GYO_2338 10886eb6403621eb6a1beafcf71b1e85 417 Gene3D G3DSA:4.10.320.10 123 161 6.5E-15 T 14-10-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 GYO_2338 10886eb6403621eb6a1beafcf71b1e85 417 Pfam PF02817 e3 binding domain 123 157 7.7E-13 T 14-10-2018 IPR004167 Peripheral subunit-binding domain GO:0016746 Reactome: R-HSA-389661 GYO_2338 10886eb6403621eb6a1beafcf71b1e85 417 Gene3D G3DSA:2.40.50.100 1 104 1.2E-25 T 14-10-2018 GYO_2338 10886eb6403621eb6a1beafcf71b1e85 417 SUPERFAMILY SSF52777 186 415 2.89E-86 T 14-10-2018 GYO_2338 10886eb6403621eb6a1beafcf71b1e85 417 Pfam PF00364 Biotin-requiring enzyme 3 75 3.1E-23 T 14-10-2018 IPR000089 Biotin/lipoyl attachment GYO_2338 10886eb6403621eb6a1beafcf71b1e85 417 TIGRFAM TIGR01347 sucB: dihydrolipoyllysine-residue succinyltransferase, E2 component of oxoglutarate dehydrogenase (succinyl-transferring) complex 3 416 9.4E-177 T 14-10-2018 IPR006255 Dihydrolipoamide succinyltransferase GO:0004149|GO:0006099|GO:0045252 KEGG: 00020+2.3.1.61|KEGG: 00310+2.3.1.61|MetaCyc: PWY-5084|Reactome: R-HSA-389661|Reactome: R-HSA-71064|Reactome: R-HSA-71403 GYO_1246 83ddf2138073b08ab37787b96dc01db1 441 SUPERFAMILY SSF54631 201 338 1.07E-28 T 14-10-2018 GYO_1246 83ddf2138073b08ab37787b96dc01db1 441 Gene3D G3DSA:3.30.465.10 346 434 3.4E-15 T 14-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 GYO_1246 83ddf2138073b08ab37787b96dc01db1 441 Pfam PF03471 Transporter associated domain 352 427 2.1E-17 T 14-10-2018 IPR005170 Transporter-associated domain GYO_1246 83ddf2138073b08ab37787b96dc01db1 441 Pfam PF00571 CBS domain 287 335 4.8E-5 T 14-10-2018 IPR000644 CBS domain GYO_1246 83ddf2138073b08ab37787b96dc01db1 441 Pfam PF00571 CBS domain 214 269 1.8E-4 T 14-10-2018 IPR000644 CBS domain GYO_1246 83ddf2138073b08ab37787b96dc01db1 441 Pfam PF01595 Domain of unknown function DUF21 4 198 6.7E-48 T 14-10-2018 IPR002550 CNNM, transmembrane domain GYO_1246 83ddf2138073b08ab37787b96dc01db1 441 Gene3D G3DSA:3.10.580.10 192 345 2.2E-48 T 14-10-2018 GYO_1246 83ddf2138073b08ab37787b96dc01db1 441 SMART SM01091 351 428 1.7E-21 T 14-10-2018 IPR005170 Transporter-associated domain GYO_1246 83ddf2138073b08ab37787b96dc01db1 441 SUPERFAMILY SSF56176 349 429 9.54E-17 T 14-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 GYO_1112 453887a56e0916791a9a7ec55dcbd0f9 325 Gene3D G3DSA:3.40.50.1980 33 142 2.6E-36 T 14-10-2018 GYO_1112 453887a56e0916791a9a7ec55dcbd0f9 325 Gene3D G3DSA:3.40.50.1980 144 325 7.2E-61 T 14-10-2018 GYO_1112 453887a56e0916791a9a7ec55dcbd0f9 325 SUPERFAMILY SSF53807 38 317 5.89E-70 T 14-10-2018 GYO_1112 453887a56e0916791a9a7ec55dcbd0f9 325 Pfam PF01497 Periplasmic binding protein 57 296 5.4E-33 T 14-10-2018 IPR002491 ABC transporter periplasmic binding domain GYO_2491 db39eb19763058114ea9865b9447058a 400 Gene3D G3DSA:3.40.50.1100 12 208 1.1E-183 T 14-10-2018 GYO_2491 db39eb19763058114ea9865b9447058a 400 Hamap MF_00133 Tryptophan synthase beta chain [trpB]. 4 392 52.005 T 14-10-2018 IPR023026 Tryptophan synthase beta chain/beta chain-like GO:0000162|GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 GYO_2491 db39eb19763058114ea9865b9447058a 400 ProSitePatterns PS00168 Tryptophan synthase beta chain pyridoxal-phosphate attachment site. 83 97 - T 14-10-2018 IPR006653 Tryptophan synthase, beta chain, conserved site GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 GYO_2491 db39eb19763058114ea9865b9447058a 400 TIGRFAM TIGR00263 trpB: tryptophan synthase, beta subunit 9 390 4.7E-187 T 14-10-2018 IPR006654 Tryptophan synthase, beta chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 GYO_2491 db39eb19763058114ea9865b9447058a 400 SUPERFAMILY SSF53686 5 390 3.67E-142 T 14-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme GYO_2491 db39eb19763058114ea9865b9447058a 400 Gene3D G3DSA:3.40.50.1100 56 385 1.1E-183 T 14-10-2018 GYO_2491 db39eb19763058114ea9865b9447058a 400 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 56 379 7.1E-50 T 14-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme GYO_2491 db39eb19763058114ea9865b9447058a 400 PIRSF PIRSF001413 2 398 9.8E-164 T 14-10-2018 IPR023026 Tryptophan synthase beta chain/beta chain-like GO:0000162|GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 GYO_0432 bbcf1938cb241b7318bcfebb3691d460 414 ProSitePatterns PS00713 Sodium:dicarboxylate symporter family signature 1. 32 47 - T 14-10-2018 IPR018107 Sodium:dicarboxylate symporter, conserved site GYO_0432 bbcf1938cb241b7318bcfebb3691d460 414 ProSitePatterns PS00714 Sodium:dicarboxylate symporter family signature 2. 290 313 - T 14-10-2018 IPR018107 Sodium:dicarboxylate symporter, conserved site GYO_0432 bbcf1938cb241b7318bcfebb3691d460 414 SUPERFAMILY SSF118215 6 396 1.44E-110 T 14-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 GYO_0432 bbcf1938cb241b7318bcfebb3691d460 414 PRINTS PR00173 Glutamate-aspartate symporter signature 70 95 2.2E-34 T 14-10-2018 GYO_0432 bbcf1938cb241b7318bcfebb3691d460 414 PRINTS PR00173 Glutamate-aspartate symporter signature 349 369 2.2E-34 T 14-10-2018 GYO_0432 bbcf1938cb241b7318bcfebb3691d460 414 PRINTS PR00173 Glutamate-aspartate symporter signature 287 313 2.2E-34 T 14-10-2018 GYO_0432 bbcf1938cb241b7318bcfebb3691d460 414 PRINTS PR00173 Glutamate-aspartate symporter signature 187 206 2.2E-34 T 14-10-2018 GYO_0432 bbcf1938cb241b7318bcfebb3691d460 414 PRINTS PR00173 Glutamate-aspartate symporter signature 222 241 2.2E-34 T 14-10-2018 GYO_0432 bbcf1938cb241b7318bcfebb3691d460 414 PRINTS PR00173 Glutamate-aspartate symporter signature 140 162 2.2E-34 T 14-10-2018 GYO_0432 bbcf1938cb241b7318bcfebb3691d460 414 PRINTS PR00173 Glutamate-aspartate symporter signature 322 341 2.2E-34 T 14-10-2018 GYO_0432 bbcf1938cb241b7318bcfebb3691d460 414 PRINTS PR00173 Glutamate-aspartate symporter signature 3 23 2.2E-34 T 14-10-2018 GYO_0432 bbcf1938cb241b7318bcfebb3691d460 414 Pfam PF00375 Sodium:dicarboxylate symporter family 6 395 1.6E-117 T 14-10-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 GYO_0432 bbcf1938cb241b7318bcfebb3691d460 414 Gene3D G3DSA:1.10.3860.10 1 413 3.2E-122 T 14-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 GYO_2716 21005a7e3c8080604da4e60d68c6c821 448 Gene3D G3DSA:3.90.1150.10 73 443 3.8E-163 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 GYO_2716 21005a7e3c8080604da4e60d68c6c821 448 Gene3D G3DSA:3.40.640.10 84 349 3.8E-163 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 GYO_2716 21005a7e3c8080604da4e60d68c6c821 448 Hamap MF_00712 Probable glycine dehydrogenase (decarboxylating) subunit 1 [gcvPA]. 3 446 49.893 T 14-10-2018 IPR023010 Probable glycine dehydrogenase (decarboxylating) subunit 1 GO:0004375|GO:0009116 KEGG: 00260+1.4.4.2 GYO_2716 21005a7e3c8080604da4e60d68c6c821 448 SUPERFAMILY SSF53383 3 443 1.69E-120 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase GYO_2716 21005a7e3c8080604da4e60d68c6c821 448 Pfam PF02347 Glycine cleavage system P-protein 3 443 1.2E-176 T 14-10-2018 IPR020581 Glycine cleavage system P protein GO:0004375|GO:0006546|GO:0055114 KEGG: 00260+1.4.4.2|Reactome: R-HSA-6783984 GYO_2716 21005a7e3c8080604da4e60d68c6c821 448 PIRSF PIRSF006815 3 447 2.0E-188 T 14-10-2018 IPR023010 Probable glycine dehydrogenase (decarboxylating) subunit 1 GO:0004375|GO:0009116 KEGG: 00260+1.4.4.2 GYO_0551 d3b0679a2ab6abf39f810fad32ab40a6 141 Gene3D G3DSA:1.10.10.10 7 136 1.0E-26 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily GYO_0551 d3b0679a2ab6abf39f810fad32ab40a6 141 Pfam PF01047 MarR family 29 87 7.6E-12 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 GYO_0551 d3b0679a2ab6abf39f810fad32ab40a6 141 PRINTS PR00598 Bacterial regulatory protein MarR family signature 112 132 2.4E-6 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 GYO_0551 d3b0679a2ab6abf39f810fad32ab40a6 141 PRINTS PR00598 Bacterial regulatory protein MarR family signature 82 98 2.4E-6 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 GYO_0551 d3b0679a2ab6abf39f810fad32ab40a6 141 PRINTS PR00598 Bacterial regulatory protein MarR family signature 63 78 2.4E-6 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 GYO_0551 d3b0679a2ab6abf39f810fad32ab40a6 141 SMART SM00347 22 122 4.3E-21 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 GYO_0551 d3b0679a2ab6abf39f810fad32ab40a6 141 SUPERFAMILY SSF46785 26 134 3.19E-25 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily GYO_2379 62a853682e19ba03048a9e4d4c6f043d 434 Pfam PF01546 Peptidase family M20/M25/M40 97 415 6.1E-40 T 14-10-2018 IPR002933 Peptidase M20 GO:0016787 GYO_2379 62a853682e19ba03048a9e4d4c6f043d 434 Gene3D G3DSA:3.40.630.10 28 419 6.5E-141 T 14-10-2018 GYO_2379 62a853682e19ba03048a9e4d4c6f043d 434 SUPERFAMILY SSF55031 203 311 2.24E-14 T 14-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain GYO_2379 62a853682e19ba03048a9e4d4c6f043d 434 Pfam PF07687 Peptidase dimerisation domain 201 313 4.9E-17 T 14-10-2018 IPR011650 Peptidase M20, dimerisation domain GYO_2379 62a853682e19ba03048a9e4d4c6f043d 434 TIGRFAM TIGR01910 DapE-ArgE: peptidase, ArgE/DapE family 20 409 7.6E-142 T 14-10-2018 IPR010182 N-formyl-4-amino-5-aminomethyl-2-methylpyrimidine deformylase/Succinyl-diaminopimelate desuccinylase GYO_2379 62a853682e19ba03048a9e4d4c6f043d 434 SUPERFAMILY SSF53187 6 419 1.34E-60 T 14-10-2018 GYO_2379 62a853682e19ba03048a9e4d4c6f043d 434 Gene3D G3DSA:3.30.70.360 204 330 6.5E-141 T 14-10-2018 GYO_2987 7da5ca499fbe9f1eb916ea0b66b52350 798 Pfam PF13604 AAA domain 346 553 1.2E-51 T 14-10-2018 GYO_2987 7da5ca499fbe9f1eb916ea0b66b52350 798 SMART SM00382 359 513 3.4E-6 T 14-10-2018 IPR003593 AAA+ ATPase domain GYO_2987 7da5ca499fbe9f1eb916ea0b66b52350 798 Pfam PF13538 UvrD-like helicase C-terminal domain 681 729 4.6E-18 T 14-10-2018 IPR027785 UvrD-like helicase C-terminal domain GYO_2987 7da5ca499fbe9f1eb916ea0b66b52350 798 Gene3D G3DSA:2.30.30.940 603 682 1.3E-142 T 14-10-2018 GYO_2987 7da5ca499fbe9f1eb916ea0b66b52350 798 Gene3D G3DSA:1.10.150.20 88 158 2.7E-5 T 14-10-2018 GYO_2987 7da5ca499fbe9f1eb916ea0b66b52350 798 Hamap MF_01488 ATP-dependent RecD-like DNA helicase [recD2]. 13 762 30.245 T 14-10-2018 IPR006345 DNA helicase, RecD-like GO:0003677|GO:0032508|GO:0043141 GYO_2987 7da5ca499fbe9f1eb916ea0b66b52350 798 Gene3D G3DSA:1.10.10.2220 199 310 1.7E-15 T 14-10-2018 GYO_2987 7da5ca499fbe9f1eb916ea0b66b52350 798 TIGRFAM TIGR01448 recD_rel: helicase, RecD/TraA family 16 755 1.1E-261 T 14-10-2018 IPR006345 DNA helicase, RecD-like GO:0003677|GO:0032508|GO:0043141 GYO_2987 7da5ca499fbe9f1eb916ea0b66b52350 798 Gene3D G3DSA:3.40.50.300 517 745 1.3E-142 T 14-10-2018 GYO_2987 7da5ca499fbe9f1eb916ea0b66b52350 798 Pfam PF14490 Helix-hairpin-helix containing domain 158 248 8.1E-31 T 14-10-2018 IPR029493 RecD helicase-like helix-hairpin-helix domain GYO_2987 7da5ca499fbe9f1eb916ea0b66b52350 798 SUPERFAMILY SSF52540 340 734 4.07E-59 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase GYO_2987 7da5ca499fbe9f1eb916ea0b66b52350 798 Gene3D G3DSA:3.40.50.300 338 751 1.3E-142 T 14-10-2018 GYO_3339 257bc5017d65d162d51261bb348b13ea 239 Pfam PF01258 Prokaryotic dksA/traR C4-type zinc finger 89 113 2.0E-7 T 14-10-2018 IPR000962 Zinc finger, DksA/TraR C4-type GO:0008270 GYO_3339 257bc5017d65d162d51261bb348b13ea 239 Gene3D G3DSA:1.20.120.910 1 127 1.2E-27 T 14-10-2018 GYO_3339 257bc5017d65d162d51261bb348b13ea 239 SUPERFAMILY SSF109635 2 90 1.83E-14 T 14-10-2018 IPR037187 DksA, N-terminal domain superfamily GYO_3339 257bc5017d65d162d51261bb348b13ea 239 TIGRFAM TIGR02890 bacill_yteA: regulatory protein, yteA family 6 163 8.8E-61 T 14-10-2018 IPR014240 Regulatory protein, YteA family GYO_1445 c5609b041ff6e30ddd1cb5d0f6974c22 250 Hamap MF_01860 UPF0736 protein . 1 250 50.638 T 14-10-2018 IPR020909 UPF0736 GYO_1445 c5609b041ff6e30ddd1cb5d0f6974c22 250 Pfam PF12227 Protein of unknown function (DUF3603) 35 250 5.5E-111 T 14-10-2018 IPR020909 UPF0736 GYO_2647 023f9b40b082959be73c0da74282e8b4 278 SUPERFAMILY SSF46955 5 115 2.05E-25 T 14-10-2018 IPR009061 Putative DNA-binding domain superfamily GYO_2647 023f9b40b082959be73c0da74282e8b4 278 Gene3D G3DSA:3.20.80.10 120 278 1.7E-66 T 14-10-2018 IPR011256 Regulatory factor, effector binding domain superfamily GYO_2647 023f9b40b082959be73c0da74282e8b4 278 Gene3D G3DSA:1.20.5.490 76 119 2.6E-28 T 14-10-2018 GYO_2647 023f9b40b082959be73c0da74282e8b4 278 ProSitePatterns PS00552 MerR-type HTH domain signature. 9 31 - T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 GYO_2647 023f9b40b082959be73c0da74282e8b4 278 Gene3D G3DSA:1.10.1660.10 1 75 2.2E-22 T 14-10-2018 GYO_2647 023f9b40b082959be73c0da74282e8b4 278 Pfam PF06445 GyrI-like small molecule binding domain 124 276 1.7E-10 T 14-10-2018 IPR029442 GyrI-like small molecule binding domain GYO_2647 023f9b40b082959be73c0da74282e8b4 278 Pfam PF13411 MerR HTH family regulatory protein 6 72 7.1E-14 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 GYO_2647 023f9b40b082959be73c0da74282e8b4 278 SUPERFAMILY SSF55136 121 276 5.23E-52 T 14-10-2018 IPR011256 Regulatory factor, effector binding domain superfamily GYO_2647 023f9b40b082959be73c0da74282e8b4 278 SMART SM00422 6 76 6.1E-23 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 GYO_3032 9d2c6d3b29ae859df9c240a077e21ffb 428 Gene3D G3DSA:2.70.210.12 1 157 3.4E-64 T 14-10-2018 IPR036726 GTP1/OBG domain superfamily GYO_3032 9d2c6d3b29ae859df9c240a077e21ffb 428 Gene3D G3DSA:2.40.240.60 357 428 1.9E-18 T 14-10-2018 IPR036346 GTP-binding protein OBG, C-terminal domain superfamily GYO_3032 9d2c6d3b29ae859df9c240a077e21ffb 428 Pfam PF09269 Domain of unknown function (DUF1967) 358 426 6.4E-25 T 14-10-2018 IPR015349 GTP-binding protein OBG, C-terminal GO:0000166 GYO_3032 9d2c6d3b29ae859df9c240a077e21ffb 428 SUPERFAMILY SSF102741 356 428 4.97E-24 T 14-10-2018 IPR036346 GTP-binding protein OBG, C-terminal domain superfamily GYO_3032 9d2c6d3b29ae859df9c240a077e21ffb 428 Hamap MF_01454 GTPase Obg [obg]. 1 329 48.899 T 14-10-2018 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 GYO_3032 9d2c6d3b29ae859df9c240a077e21ffb 428 Gene3D G3DSA:3.40.50.300 158 342 2.2E-63 T 14-10-2018 GYO_3032 9d2c6d3b29ae859df9c240a077e21ffb 428 ProSitePatterns PS00905 GTP1/OBG family signature. 212 225 - T 14-10-2018 IPR006074 GTP1/OBG, conserved site GO:0005525 GYO_3032 9d2c6d3b29ae859df9c240a077e21ffb 428 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 210 225 4.5E-35 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 GYO_3032 9d2c6d3b29ae859df9c240a077e21ffb 428 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 161 181 4.5E-35 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 GYO_3032 9d2c6d3b29ae859df9c240a077e21ffb 428 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 182 200 4.5E-35 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 GYO_3032 9d2c6d3b29ae859df9c240a077e21ffb 428 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 227 245 4.5E-35 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 GYO_3032 9d2c6d3b29ae859df9c240a077e21ffb 428 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 160 320 1.2E-12 T 14-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 GYO_3032 9d2c6d3b29ae859df9c240a077e21ffb 428 TIGRFAM TIGR02729 Obg_CgtA: Obg family GTPase CgtA 2 328 4.2E-145 T 14-10-2018 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 GYO_3032 9d2c6d3b29ae859df9c240a077e21ffb 428 SUPERFAMILY SSF82051 1 157 1.15E-56 T 14-10-2018 IPR036726 GTP1/OBG domain superfamily GYO_3032 9d2c6d3b29ae859df9c240a077e21ffb 428 SUPERFAMILY SSF52540 160 334 1.34E-53 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase GYO_3032 9d2c6d3b29ae859df9c240a077e21ffb 428 Pfam PF01018 GTP1/OBG 3 157 8.9E-62 T 14-10-2018 IPR006169 GTP1/OBG domain GYO_3032 9d2c6d3b29ae859df9c240a077e21ffb 428 Pfam PF01926 50S ribosome-binding GTPase 160 283 1.4E-23 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 GYO_3032 9d2c6d3b29ae859df9c240a077e21ffb 428 TIGRFAM TIGR03595 Obg_CgtA_exten: Obg family GTPase CgtA, C-terminal extension 358 426 2.5E-26 T 14-10-2018 IPR015349 GTP-binding protein OBG, C-terminal GO:0000166 GYO_3032 9d2c6d3b29ae859df9c240a077e21ffb 428 PIRSF PIRSF002401 1 376 3.3E-146 T 14-10-2018 IPR035101 GTP-binding protein, Obg-type GYO_2172 b3bfc445c17e05114d107a6d36a31ba3 83 Hamap MF_01506 Small, acid-soluble spore protein Tlp [tlp]. 1 83 35.096 T 14-10-2018 IPR017524 Small acid-soluble spore protein, thioredoxin-like GYO_2172 b3bfc445c17e05114d107a6d36a31ba3 83 TIGRFAM TIGR03090 SASP_tlp: small, acid-soluble spore protein tlp 11 77 5.6E-31 T 14-10-2018 IPR017524 Small acid-soluble spore protein, thioredoxin-like GYO_0501 3db4248264947e666e8f0f21e46f459a 93 Gene3D G3DSA:1.10.10.10 1 92 2.6E-19 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily GYO_0501 3db4248264947e666e8f0f21e46f459a 93 SMART SM00418 11 91 1.1E-21 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 GYO_0501 3db4248264947e666e8f0f21e46f459a 93 Pfam PF12840 Helix-turn-helix domain 10 71 1.9E-14 T 14-10-2018 GYO_0501 3db4248264947e666e8f0f21e46f459a 93 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 47 62 2.4E-11 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 GYO_0501 3db4248264947e666e8f0f21e46f459a 93 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 62 77 2.4E-11 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 GYO_0501 3db4248264947e666e8f0f21e46f459a 93 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 13 28 2.4E-11 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 GYO_0501 3db4248264947e666e8f0f21e46f459a 93 SUPERFAMILY SSF46785 4 91 4.61E-19 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily GYO_0727 65aa37caa13b409bb4e4a3c75832f494 208 PIRSF PIRSF006324 1 208 6.0E-55 T 14-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 GYO_0727 65aa37caa13b409bb4e4a3c75832f494 208 Pfam PF01810 LysE type translocator 16 206 2.9E-37 T 14-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 GYO_1491 abff61613bf2ca8b5940301f2b8f5e76 140 SUPERFAMILY SSF55729 3 140 4.29E-34 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase GYO_1491 abff61613bf2ca8b5940301f2b8f5e76 140 Pfam PF13673 Acetyltransferase (GNAT) domain 12 139 3.5E-21 T 14-10-2018 IPR000182 GNAT domain GYO_1491 abff61613bf2ca8b5940301f2b8f5e76 140 Gene3D G3DSA:3.40.630.30 2 140 1.8E-46 T 14-10-2018 GYO_4162 93339c21885653827fd34e82a245c883 470 Gene3D G3DSA:1.20.1740.10 7 467 1.7E-66 T 14-10-2018 GYO_4162 93339c21885653827fd34e82a245c883 470 PIRSF PIRSF006060 1 469 2.3E-76 T 14-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 GYO_4162 93339c21885653827fd34e82a245c883 470 Pfam PF00324 Amino acid permease 16 460 1.0E-124 T 14-10-2018 IPR004841 Amino acid permease/ SLC12A domain GO:0016020|GO:0055085 GYO_4162 93339c21885653827fd34e82a245c883 470 ProSitePatterns PS00218 Amino acid permeases signature. 41 72 - T 14-10-2018 IPR004840 Amino acid permease, conserved site GO:0006865|GO:0016021|GO:0055085 GYO_2232 da40ecb0adde2e1bef3421a7198dfb04 414 Gene3D G3DSA:1.20.1250.20 211 409 2.1E-19 T 14-10-2018 GYO_2232 da40ecb0adde2e1bef3421a7198dfb04 414 SUPERFAMILY SSF103473 9 403 1.96E-49 T 14-10-2018 IPR036259 MFS transporter superfamily GYO_2232 da40ecb0adde2e1bef3421a7198dfb04 414 Gene3D G3DSA:1.20.1250.20 8 201 9.8E-19 T 14-10-2018 GYO_2232 da40ecb0adde2e1bef3421a7198dfb04 414 Pfam PF07690 Major Facilitator Superfamily 15 323 4.4E-21 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 GYO_2232 da40ecb0adde2e1bef3421a7198dfb04 414 TIGRFAM TIGR00897 2A0118: polyol permease 1 398 7.7E-209 T 14-10-2018 IPR004748 Polyol permease GO:0016021|GO:0022857|GO:0055085 GYO_1927 952c245ccf4951edf648a71c1f7276d5 254 Gene3D G3DSA:3.60.40.10 1 244 5.9E-73 T 14-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 GYO_1927 952c245ccf4951edf648a71c1f7276d5 254 Pfam PF13672 Protein phosphatase 2C 14 205 2.2E-21 T 14-10-2018 GYO_1927 952c245ccf4951edf648a71c1f7276d5 254 SMART SM00331 7 243 1.7E-70 T 14-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 GYO_1927 952c245ccf4951edf648a71c1f7276d5 254 SMART SM00332 1 241 2.0E-35 T 14-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 GYO_1927 952c245ccf4951edf648a71c1f7276d5 254 SUPERFAMILY SSF81606 5 242 3.4E-66 T 14-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 GYO_0720 4b3bf9b01254c8c79ce1a831ffaeee52 173 Gene3D G3DSA:3.30.70.920 89 173 1.2E-11 T 14-10-2018 GYO_0720 4b3bf9b01254c8c79ce1a831ffaeee52 173 Gene3D G3DSA:1.10.10.10 38 86 7.6E-18 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily GYO_0720 4b3bf9b01254c8c79ce1a831ffaeee52 173 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 55 66 2.4E-9 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 GYO_0720 4b3bf9b01254c8c79ce1a831ffaeee52 173 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 39 55 2.4E-9 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 GYO_0720 4b3bf9b01254c8c79ce1a831ffaeee52 173 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 66 85 2.4E-9 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 GYO_0720 4b3bf9b01254c8c79ce1a831ffaeee52 173 SMART SM00344 39 146 9.8E-23 T 14-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 GYO_0720 4b3bf9b01254c8c79ce1a831ffaeee52 173 Pfam PF01037 Lrp/AsnC ligand binding domain 126 171 1.5E-7 T 14-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain GYO_0720 4b3bf9b01254c8c79ce1a831ffaeee52 173 SUPERFAMILY SSF54909 101 172 1.11E-7 T 14-10-2018 IPR011008 Dimeric alpha-beta barrel GYO_0720 4b3bf9b01254c8c79ce1a831ffaeee52 173 SUPERFAMILY SSF46785 38 99 1.62E-13 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily GYO_0720 4b3bf9b01254c8c79ce1a831ffaeee52 173 Pfam PF13404 AsnC-type helix-turn-helix domain 39 79 3.1E-12 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 GYO_3813 54f759087b28ace6d10b5ecc4411bfc5 155 PRINTS PR00502 NUDIX hydrolase family signature 26 40 9.9E-6 T 14-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 GYO_3813 54f759087b28ace6d10b5ecc4411bfc5 155 PRINTS PR00502 NUDIX hydrolase family signature 40 55 9.9E-6 T 14-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 GYO_3813 54f759087b28ace6d10b5ecc4411bfc5 155 Gene3D G3DSA:3.90.79.10 1 153 6.5E-43 T 14-10-2018 GYO_3813 54f759087b28ace6d10b5ecc4411bfc5 155 SUPERFAMILY SSF55811 4 128 4.33E-28 T 14-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 GYO_3813 54f759087b28ace6d10b5ecc4411bfc5 155 Pfam PF00293 NUDIX domain 4 122 6.0E-17 T 14-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 GYO_1211 47eae5f0dd95b4516a5d898fdc2d248d 220 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 58 178 1.5E-5 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 GYO_1211 47eae5f0dd95b4516a5d898fdc2d248d 220 Gene3D G3DSA:1.10.150.240 15 84 1.9E-51 T 14-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 GYO_1211 47eae5f0dd95b4516a5d898fdc2d248d 220 Pfam PF13419 Haloacid dehalogenase-like hydrolase 5 184 4.6E-32 T 14-10-2018 GYO_1211 47eae5f0dd95b4516a5d898fdc2d248d 220 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 2 13 1.3E-10 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 GYO_1211 47eae5f0dd95b4516a5d898fdc2d248d 220 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 173 186 1.3E-10 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 GYO_1211 47eae5f0dd95b4516a5d898fdc2d248d 220 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 146 166 1.3E-10 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 GYO_1211 47eae5f0dd95b4516a5d898fdc2d248d 220 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 128 144 1.3E-10 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 GYO_1211 47eae5f0dd95b4516a5d898fdc2d248d 220 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 97 110 1.3E-10 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 GYO_1211 47eae5f0dd95b4516a5d898fdc2d248d 220 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 58 184 2.5E-18 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 GYO_1211 47eae5f0dd95b4516a5d898fdc2d248d 220 Gene3D G3DSA:3.40.50.1000 3 202 1.9E-51 T 14-10-2018 IPR023214 HAD superfamily GYO_1211 47eae5f0dd95b4516a5d898fdc2d248d 220 SUPERFAMILY SSF56784 2 207 1.73E-45 T 14-10-2018 IPR036412 HAD-like superfamily GYO_0715 3140da321023b54ac485fefc3c058bf6 147 SUPERFAMILY SSF54909 64 135 5.09E-14 T 14-10-2018 IPR011008 Dimeric alpha-beta barrel GYO_0715 3140da321023b54ac485fefc3c058bf6 147 Gene3D G3DSA:1.10.10.10 1 52 4.9E-21 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily GYO_0715 3140da321023b54ac485fefc3c058bf6 147 Gene3D G3DSA:3.30.70.920 53 135 8.3E-18 T 14-10-2018 GYO_0715 3140da321023b54ac485fefc3c058bf6 147 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 1 17 4.4E-16 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 GYO_0715 3140da321023b54ac485fefc3c058bf6 147 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 28 47 4.4E-16 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 GYO_0715 3140da321023b54ac485fefc3c058bf6 147 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 17 28 4.4E-16 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 GYO_0715 3140da321023b54ac485fefc3c058bf6 147 Pfam PF01037 Lrp/AsnC ligand binding domain 76 133 8.5E-12 T 14-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain GYO_0715 3140da321023b54ac485fefc3c058bf6 147 SUPERFAMILY SSF46785 1 60 1.08E-16 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily GYO_0715 3140da321023b54ac485fefc3c058bf6 147 ProSitePatterns PS00519 AsnC-type HTH domain signature. 19 45 - T 14-10-2018 IPR019885 Transcription regulator HTH, AsnC-type, conserved site GYO_0715 3140da321023b54ac485fefc3c058bf6 147 SMART SM00344 1 107 3.3E-34 T 14-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 GYO_0715 3140da321023b54ac485fefc3c058bf6 147 Pfam PF13412 Winged helix-turn-helix DNA-binding 1 48 3.0E-18 T 14-10-2018 GYO_2030 4ba2241059da88dad6fdd02d2de3c205 200 TIGRFAM TIGR02852 spore_dpaB: dipicolinic acid synthetase, B subunit 7 193 6.1E-104 T 14-10-2018 IPR014214 Dipicolinic acid synthetase, subunit B GYO_2030 4ba2241059da88dad6fdd02d2de3c205 200 SUPERFAMILY SSF52507 7 193 4.71E-29 T 14-10-2018 IPR036551 Flavin prenyltransferase-like GO:0003824 Reactome: R-HSA-196783 GYO_2030 4ba2241059da88dad6fdd02d2de3c205 200 Pfam PF02441 Flavoprotein 7 167 4.8E-18 T 14-10-2018 IPR003382 Flavoprotein GO:0003824 Reactome: R-HSA-196783 GYO_2030 4ba2241059da88dad6fdd02d2de3c205 200 PIRSF PIRSF001390 1 197 1.5E-76 T 14-10-2018 IPR014214 Dipicolinic acid synthetase, subunit B GYO_2030 4ba2241059da88dad6fdd02d2de3c205 200 Gene3D G3DSA:3.40.50.1950 1 200 8.0E-60 T 14-10-2018 IPR036551 Flavin prenyltransferase-like GO:0003824 Reactome: R-HSA-196783 GYO_2268 b6077a3a845e94b02982d8a2923ee122 304 Pfam PF13354 Beta-lactamase enzyme family 71 276 2.6E-33 T 14-10-2018 GYO_2268 b6077a3a845e94b02982d8a2923ee122 304 Gene3D G3DSA:3.40.710.10 37 303 5.9E-77 T 14-10-2018 GYO_2268 b6077a3a845e94b02982d8a2923ee122 304 PRINTS PR00118 Beta-lactamase class A signature 219 234 7.7E-68 T 14-10-2018 IPR000871 Beta-lactamase, class-A GO:0008800|GO:0030655|GO:0046677 KEGG: 00311+3.5.2.6 GYO_2268 b6077a3a845e94b02982d8a2923ee122 304 PRINTS PR00118 Beta-lactamase class A signature 50 74 7.7E-68 T 14-10-2018 IPR000871 Beta-lactamase, class-A GO:0008800|GO:0030655|GO:0046677 KEGG: 00311+3.5.2.6 GYO_2268 b6077a3a845e94b02982d8a2923ee122 304 PRINTS PR00118 Beta-lactamase class A signature 236 251 7.7E-68 T 14-10-2018 IPR000871 Beta-lactamase, class-A GO:0008800|GO:0030655|GO:0046677 KEGG: 00311+3.5.2.6 GYO_2268 b6077a3a845e94b02982d8a2923ee122 304 PRINTS PR00118 Beta-lactamase class A signature 121 146 7.7E-68 T 14-10-2018 IPR000871 Beta-lactamase, class-A GO:0008800|GO:0030655|GO:0046677 KEGG: 00311+3.5.2.6 GYO_2268 b6077a3a845e94b02982d8a2923ee122 304 PRINTS PR00118 Beta-lactamase class A signature 183 208 7.7E-68 T 14-10-2018 IPR000871 Beta-lactamase, class-A GO:0008800|GO:0030655|GO:0046677 KEGG: 00311+3.5.2.6 GYO_2268 b6077a3a845e94b02982d8a2923ee122 304 PRINTS PR00118 Beta-lactamase class A signature 81 98 7.7E-68 T 14-10-2018 IPR000871 Beta-lactamase, class-A GO:0008800|GO:0030655|GO:0046677 KEGG: 00311+3.5.2.6 GYO_2268 b6077a3a845e94b02982d8a2923ee122 304 PRINTS PR00118 Beta-lactamase class A signature 157 181 7.7E-68 T 14-10-2018 IPR000871 Beta-lactamase, class-A GO:0008800|GO:0030655|GO:0046677 KEGG: 00311+3.5.2.6 GYO_2268 b6077a3a845e94b02982d8a2923ee122 304 ProSitePatterns PS00146 Beta-lactamase class-A active site. 83 98 - T 14-10-2018 IPR023650 Beta-lactamase, class-A active site KEGG: 00311+3.5.2.6 GYO_2268 b6077a3a845e94b02982d8a2923ee122 304 SUPERFAMILY SSF56601 51 303 2.98E-74 T 14-10-2018 IPR012338 Beta-lactamase/transpeptidase-like GYO_3115 f5bdd5a5d3dcb8909f67a3bfd9872a3b 470 Pfam PF01565 FAD binding domain 41 180 3.7E-43 T 14-10-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 GYO_3115 f5bdd5a5d3dcb8909f67a3bfd9872a3b 470 Pfam PF02913 FAD linked oxidases, C-terminal domain 216 457 1.1E-75 T 14-10-2018 IPR004113 FAD-linked oxidase, C-terminal GO:0003824|GO:0050660 GYO_3115 f5bdd5a5d3dcb8909f67a3bfd9872a3b 470 SUPERFAMILY SSF56176 5 217 3.78E-74 T 14-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 GYO_3115 f5bdd5a5d3dcb8909f67a3bfd9872a3b 470 SUPERFAMILY SSF55103 220 460 3.92E-67 T 14-10-2018 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 GYO_3115 f5bdd5a5d3dcb8909f67a3bfd9872a3b 470 Gene3D G3DSA:3.30.465.40 3 238 5.5E-79 T 14-10-2018 GYO_3115 f5bdd5a5d3dcb8909f67a3bfd9872a3b 470 Gene3D G3DSA:3.30.70.2740 336 417 5.3E-14 T 14-10-2018 GYO_3115 f5bdd5a5d3dcb8909f67a3bfd9872a3b 470 TIGRFAM TIGR00387 glcD: glycolate oxidase, subunit GlcD 44 456 1.4E-196 T 14-10-2018 IPR004490 Glycolate oxidase subunit GlcD GO:0008891|GO:0009339 GYO_3115 f5bdd5a5d3dcb8909f67a3bfd9872a3b 470 Gene3D G3DSA:1.10.45.10 418 458 9.2E-12 T 14-10-2018 IPR016171 Vanillyl-alcohol oxidase, C-terminal subdomain 2 GYO_2281 a12bfc4110489e83b7d0c370cd6047b3 411 PRINTS PR00359 B-class P450 signature 284 295 4.2E-53 T 14-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 GYO_2281 a12bfc4110489e83b7d0c370cd6047b3 411 PRINTS PR00359 B-class P450 signature 302 329 4.2E-53 T 14-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 GYO_2281 a12bfc4110489e83b7d0c370cd6047b3 411 PRINTS PR00359 B-class P450 signature 203 225 4.2E-53 T 14-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 GYO_2281 a12bfc4110489e83b7d0c370cd6047b3 411 PRINTS PR00359 B-class P450 signature 146 162 4.2E-53 T 14-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 GYO_2281 a12bfc4110489e83b7d0c370cd6047b3 411 PRINTS PR00359 B-class P450 signature 351 360 4.2E-53 T 14-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 GYO_2281 a12bfc4110489e83b7d0c370cd6047b3 411 PRINTS PR00359 B-class P450 signature 330 345 4.2E-53 T 14-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 GYO_2281 a12bfc4110489e83b7d0c370cd6047b3 411 PRINTS PR00359 B-class P450 signature 100 111 4.2E-53 T 14-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 GYO_2281 a12bfc4110489e83b7d0c370cd6047b3 411 PRINTS PR00359 B-class P450 signature 360 371 4.2E-53 T 14-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 GYO_2281 a12bfc4110489e83b7d0c370cd6047b3 411 PRINTS PR00359 B-class P450 signature 163 178 4.2E-53 T 14-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 GYO_2281 a12bfc4110489e83b7d0c370cd6047b3 411 ProSitePatterns PS00086 Cytochrome P450 cysteine heme-iron ligand signature. 353 362 - T 14-10-2018 IPR017972 Cytochrome P450, conserved site GO:0016705|GO:0055114 GYO_2281 a12bfc4110489e83b7d0c370cd6047b3 411 Pfam PF00067 Cytochrome P450 217 389 5.4E-26 T 14-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 GYO_2281 a12bfc4110489e83b7d0c370cd6047b3 411 PRINTS PR00385 P450 superfamily signature 351 360 1.9E-6 T 14-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 GYO_2281 a12bfc4110489e83b7d0c370cd6047b3 411 PRINTS PR00385 P450 superfamily signature 249 266 1.9E-6 T 14-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 GYO_2281 a12bfc4110489e83b7d0c370cd6047b3 411 PRINTS PR00385 P450 superfamily signature 360 371 1.9E-6 T 14-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 GYO_2281 a12bfc4110489e83b7d0c370cd6047b3 411 PRINTS PR00385 P450 superfamily signature 284 295 1.9E-6 T 14-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 GYO_2281 a12bfc4110489e83b7d0c370cd6047b3 411 Gene3D G3DSA:1.10.630.10 7 411 1.0E-126 T 14-10-2018 IPR036396 Cytochrome P450 superfamily GO:0005506|GO:0016705|GO:0020037|GO:0055114 GYO_2281 a12bfc4110489e83b7d0c370cd6047b3 411 SUPERFAMILY SSF48264 21 411 4.45E-94 T 14-10-2018 IPR036396 Cytochrome P450 superfamily GO:0005506|GO:0016705|GO:0020037|GO:0055114 GYO_4122 cef80915087f2bd106da7692f8576db2 427 Gene3D G3DSA:3.30.830.10 10 217 7.0E-33 T 14-10-2018 GYO_4122 cef80915087f2bd106da7692f8576db2 427 SUPERFAMILY SSF63411 19 218 3.12E-29 T 14-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 GYO_4122 cef80915087f2bd106da7692f8576db2 427 Pfam PF00675 Insulinase (Peptidase family M16) 62 153 7.2E-13 T 14-10-2018 IPR011765 Peptidase M16, N-terminal GYO_4380 dd27c76cea491947c23c918588c61541 637 Gene3D G3DSA:3.40.50.970 2 206 9.2E-31 T 14-10-2018 GYO_4380 dd27c76cea491947c23c918588c61541 637 TIGRFAM TIGR04377 myo_inos_iolD: 3,5/4-trihydroxycyclohexa-1,2-dione hydrolase 6 634 6.4E-271 T 14-10-2018 IPR030817 3,5/4-Trihydroxycyclohexa-1,2-dione hydrolase GO:0016823|GO:0019310|GO:0030976 KEGG: 00562+3.7.1.22 GYO_4380 dd27c76cea491947c23c918588c61541 637 Gene3D G3DSA:3.40.50.1220 213 403 8.3E-34 T 14-10-2018 GYO_4380 dd27c76cea491947c23c918588c61541 637 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 8 196 4.4E-30 T 14-10-2018 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 GYO_4380 dd27c76cea491947c23c918588c61541 637 SUPERFAMILY SSF52467 212 376 1.41E-37 T 14-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily GYO_4380 dd27c76cea491947c23c918588c61541 637 Hamap MF_01669 3D-(3,5/4)-trihydroxycyclohexane-1,2-dione hydrolase [iolD]. 2 637 61.032 T 14-10-2018 IPR023757 3D-(3,5/4)-trihydroxycyclohexane-1,2-dione hydrolase, Firmicutes GO:0000287|GO:0016787|GO:0019310|GO:0030976 KEGG: 00562+3.7.1.22 GYO_4380 dd27c76cea491947c23c918588c61541 637 Gene3D G3DSA:3.40.50.970 414 604 1.4E-47 T 14-10-2018 GYO_4380 dd27c76cea491947c23c918588c61541 637 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 221 354 3.7E-32 T 14-10-2018 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 GYO_4380 dd27c76cea491947c23c918588c61541 637 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 440 592 1.3E-42 T 14-10-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 GYO_4380 dd27c76cea491947c23c918588c61541 637 SUPERFAMILY SSF52518 417 630 3.13E-57 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold GYO_4380 dd27c76cea491947c23c918588c61541 637 ProSitePatterns PS00187 Thiamine pyrophosphate enzymes signature. 476 495 - T 14-10-2018 IPR000399 TPP-binding enzyme, conserved site GO:0000287|GO:0030976 GYO_4380 dd27c76cea491947c23c918588c61541 637 SUPERFAMILY SSF52518 3 210 1.2E-30 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold GYO_1410 5b2c042b4dbec6ff49dd0fe6b713f825 96 Pfam PF12650 Domain of unknown function (DUF3784) 10 91 1.4E-9 T 14-10-2018 IPR017259 Uncharacterised conserved protein UCP037672 GYO_3385 2d7f624e19c8c5a6f9074a5c56bd1187 180 Gene3D G3DSA:1.10.10.10 8 91 3.5E-19 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily GYO_3385 2d7f624e19c8c5a6f9074a5c56bd1187 180 SUPERFAMILY SSF46785 9 160 7.96E-22 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily GYO_3385 2d7f624e19c8c5a6f9074a5c56bd1187 180 PIRSF PIRSF006707 1 180 5.3E-55 T 14-10-2018 IPR026282 DNA-binding protein, MJ1563 type GYO_1938 204f24891c4c6fcd39095901fb039234 188 Gene3D G3DSA:1.10.10.10 1 60 1.8E-27 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily GYO_1938 204f24891c4c6fcd39095901fb039234 188 PIRSF PIRSF037733 1 188 1.1E-84 T 14-10-2018 IPR017275 Transcription factor FapR GO:0003700|GO:0045717|GO:0045892 GYO_1938 204f24891c4c6fcd39095901fb039234 188 Pfam PF03061 Thioesterase superfamily 108 166 3.1E-4 T 14-10-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 GYO_1938 204f24891c4c6fcd39095901fb039234 188 SUPERFAMILY SSF54637 74 182 2.99E-26 T 14-10-2018 IPR029069 HotDog domain superfamily GYO_1938 204f24891c4c6fcd39095901fb039234 188 Hamap MF_01814 Transcription factor FapR [fapR]. 1 188 38.809 T 14-10-2018 IPR017275 Transcription factor FapR GO:0003700|GO:0045717|GO:0045892 GYO_1938 204f24891c4c6fcd39095901fb039234 188 Gene3D G3DSA:3.10.129.10 68 188 1.1E-41 T 14-10-2018 GYO_0147 c2e08b099ec161f5bc916bfefafbd392 113 Pfam PF00237 Ribosomal protein L22p/L17e 5 107 2.8E-37 T 14-10-2018 IPR001063 Ribosomal protein L22/L17 GO:0003735|GO:0005840|GO:0006412 GYO_0147 c2e08b099ec161f5bc916bfefafbd392 113 Hamap MF_01331_B 50S ribosomal protein L22 [rplV]. 1 110 30.684 T 14-10-2018 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 GYO_0147 c2e08b099ec161f5bc916bfefafbd392 113 TIGRFAM TIGR01044 rplV_bact: ribosomal protein uL22 5 107 1.6E-54 T 14-10-2018 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 GYO_0147 c2e08b099ec161f5bc916bfefafbd392 113 Gene3D G3DSA:3.90.470.10 1 113 2.7E-51 T 14-10-2018 IPR036394 Ribosomal protein L22/L17 superfamily GO:0003735|GO:0005840|GO:0006412 GYO_0147 c2e08b099ec161f5bc916bfefafbd392 113 ProSitePatterns PS00464 Ribosomal protein L22 signature. 83 107 - T 14-10-2018 IPR018260 Ribosomal protein L22/L17, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 GYO_0147 c2e08b099ec161f5bc916bfefafbd392 113 SUPERFAMILY SSF54843 1 112 2.09E-44 T 14-10-2018 IPR036394 Ribosomal protein L22/L17 superfamily GO:0003735|GO:0005840|GO:0006412 GYO_0502 eaf1acd817f3170a8e5eddd5013241e1 418 SUPERFAMILY SSF52540 40 275 4.43E-76 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase GYO_0502 eaf1acd817f3170a8e5eddd5013241e1 418 SMART SM00116 287 335 0.0031 T 14-10-2018 IPR000644 CBS domain GYO_0502 eaf1acd817f3170a8e5eddd5013241e1 418 SMART SM00116 347 394 1.7E-4 T 14-10-2018 IPR000644 CBS domain GYO_0502 eaf1acd817f3170a8e5eddd5013241e1 418 Gene3D G3DSA:3.40.50.300 6 274 1.4E-71 T 14-10-2018 GYO_0502 eaf1acd817f3170a8e5eddd5013241e1 418 Gene3D G3DSA:3.10.580.10 283 395 2.5E-16 T 14-10-2018 GYO_0502 eaf1acd817f3170a8e5eddd5013241e1 418 ProSitePatterns PS00211 ABC transporters family signature. 170 184 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 GYO_0502 eaf1acd817f3170a8e5eddd5013241e1 418 TIGRFAM TIGR01186 proV: glycine betaine/L-proline transport ATP binding subunit 41 396 3.3E-179 T 14-10-2018 IPR005892 Glycine betaine transport ATP-binding subunit GO:0005524|GO:0016020|GO:0031460 GYO_0502 eaf1acd817f3170a8e5eddd5013241e1 418 SMART SM00382 58 247 9.8E-21 T 14-10-2018 IPR003593 AAA+ ATPase domain GYO_0502 eaf1acd817f3170a8e5eddd5013241e1 418 Pfam PF00005 ABC transporter 50 197 3.7E-35 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 GYO_0502 eaf1acd817f3170a8e5eddd5013241e1 418 Pfam PF00571 CBS domain 342 394 7.3E-4 T 14-10-2018 IPR000644 CBS domain GYO_0502 eaf1acd817f3170a8e5eddd5013241e1 418 SUPERFAMILY SSF54631 279 395 1.89E-18 T 14-10-2018 GYO_3803 42be88143d89bc012534c7ba524f1afc 646 Pfam PF02687 FtsX-like permease family 86 181 9.1E-7 T 14-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 GYO_3803 42be88143d89bc012534c7ba524f1afc 646 PIRSF PIRSF018968 1 646 2.8E-160 T 14-10-2018 IPR027022 ABC transporter permease protein, BceB-type GO:0055085 GYO_1994 72c31efb6168728bdf30d3f3076e4f84 677 Gene3D G3DSA:3.40.30.60 342 485 6.8E-53 T 14-10-2018 GYO_1994 72c31efb6168728bdf30d3f3076e4f84 677 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 221 235 1.5E-54 T 14-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 GYO_1994 72c31efb6168728bdf30d3f3076e4f84 677 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 121 137 1.5E-54 T 14-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 GYO_1994 72c31efb6168728bdf30d3f3076e4f84 677 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 59 78 1.5E-54 T 14-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 GYO_1994 72c31efb6168728bdf30d3f3076e4f84 677 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 22 35 1.5E-54 T 14-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 GYO_1994 72c31efb6168728bdf30d3f3076e4f84 677 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 140 158 1.5E-54 T 14-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 GYO_1994 72c31efb6168728bdf30d3f3076e4f84 677 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 170 187 1.5E-54 T 14-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 GYO_1994 72c31efb6168728bdf30d3f3076e4f84 677 Gene3D G3DSA:1.10.490.80 577 675 2.8E-28 T 14-10-2018 GYO_1994 72c31efb6168728bdf30d3f3076e4f84 677 ProSitePatterns PS00994 Bacterial export FHIPEP family signature. 126 149 - T 14-10-2018 IPR025505 FHIPEP conserved site GYO_1994 72c31efb6168728bdf30d3f3076e4f84 677 Gene3D G3DSA:1.10.8.540 486 575 6.6E-32 T 14-10-2018 GYO_1994 72c31efb6168728bdf30d3f3076e4f84 677 TIGRFAM TIGR01398 FlhA: flagellar biosynthesis protein FlhA 4 675 1.4E-287 T 14-10-2018 IPR006301 Flagellar biosynthesis protein FlhA GO:0016021|GO:0044780 GYO_1994 72c31efb6168728bdf30d3f3076e4f84 677 PIRSF PIRSF005419 1 677 1.1E-259 T 14-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 GYO_1994 72c31efb6168728bdf30d3f3076e4f84 677 Pfam PF00771 FHIPEP family 15 667 4.1E-274 T 14-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 GYO_0732 e671e0f59ca503bb8bec75c78ba42684 66 Pfam PF00313 'Cold-shock' DNA-binding domain 3 65 1.8E-31 T 14-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 GYO_0732 e671e0f59ca503bb8bec75c78ba42684 66 PIRSF PIRSF002599 1 66 9.2E-25 T 14-10-2018 IPR012156 Cold shock, CspA GO:0003676 GYO_0732 e671e0f59ca503bb8bec75c78ba42684 66 ProSitePatterns PS00352 'Cold-shock' domain signature. 15 33 - T 14-10-2018 IPR019844 Cold-shock conserved site GYO_0732 e671e0f59ca503bb8bec75c78ba42684 66 Gene3D G3DSA:2.40.50.140 1 66 4.4E-30 T 14-10-2018 GYO_0732 e671e0f59ca503bb8bec75c78ba42684 66 PRINTS PR00050 Cold shock protein signature 4 19 2.5E-19 T 14-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 GYO_0732 e671e0f59ca503bb8bec75c78ba42684 66 PRINTS PR00050 Cold shock protein signature 24 33 2.5E-19 T 14-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 GYO_0732 e671e0f59ca503bb8bec75c78ba42684 66 PRINTS PR00050 Cold shock protein signature 39 57 2.5E-19 T 14-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 GYO_0732 e671e0f59ca503bb8bec75c78ba42684 66 SUPERFAMILY SSF50249 1 64 3.6E-25 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold GYO_0732 e671e0f59ca503bb8bec75c78ba42684 66 SMART SM00357 3 66 2.4E-32 T 14-10-2018 IPR011129 Cold shock domain GO:0003676 GYO_0605 8c464ed0b8bd61319a9dd8a7600225b1 479 SUPERFAMILY SSF53383 103 468 8.18E-68 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase GYO_0605 8c464ed0b8bd61319a9dd8a7600225b1 479 SUPERFAMILY SSF46785 15 83 1.03E-17 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily GYO_0605 8c464ed0b8bd61319a9dd8a7600225b1 479 Gene3D G3DSA:3.40.640.10 94 463 8.2E-148 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 GYO_0605 8c464ed0b8bd61319a9dd8a7600225b1 479 Pfam PF00392 Bacterial regulatory proteins, gntR family 17 79 2.9E-16 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 GYO_0605 8c464ed0b8bd61319a9dd8a7600225b1 479 Pfam PF00155 Aminotransferase class I and II 118 410 1.4E-18 T 14-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 GYO_0605 8c464ed0b8bd61319a9dd8a7600225b1 479 Gene3D G3DSA:1.10.10.10 1 93 1.0E-29 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily GYO_0605 8c464ed0b8bd61319a9dd8a7600225b1 479 SMART SM00345 20 79 9.9E-15 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 GYO_2662 fbfa663a8f43c14834745c6a53ff0b74 393 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 6 391 8.8E-143 T 14-10-2018 IPR002155 Thiolase GO:0016747 GYO_2662 fbfa663a8f43c14834745c6a53ff0b74 393 ProSitePatterns PS00737 Thiolases signature 2. 339 355 - T 14-10-2018 IPR020613 Thiolase, conserved site GO:0016747 GYO_2662 fbfa663a8f43c14834745c6a53ff0b74 393 ProSitePatterns PS00098 Thiolases acyl-enzyme intermediate signature. 84 102 - T 14-10-2018 IPR020615 Thiolase, acyl-enzyme intermediate active site GO:0016747 GYO_2662 fbfa663a8f43c14834745c6a53ff0b74 393 ProSitePatterns PS00099 Thiolases active site. 374 387 - T 14-10-2018 IPR020610 Thiolase, active site GO:0016747 GYO_2662 fbfa663a8f43c14834745c6a53ff0b74 393 SUPERFAMILY SSF53901 4 269 1.87E-77 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 GYO_2662 fbfa663a8f43c14834745c6a53ff0b74 393 Gene3D G3DSA:3.40.47.10 126 390 6.9E-142 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 GYO_2662 fbfa663a8f43c14834745c6a53ff0b74 393 SUPERFAMILY SSF53901 271 391 7.68E-39 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 GYO_2662 fbfa663a8f43c14834745c6a53ff0b74 393 Pfam PF02803 Thiolase, C-terminal domain 271 391 1.6E-48 T 14-10-2018 IPR020617 Thiolase, C-terminal GO:0016747 GYO_2662 fbfa663a8f43c14834745c6a53ff0b74 393 Pfam PF00108 Thiolase, N-terminal domain 5 263 9.7E-100 T 14-10-2018 IPR020616 Thiolase, N-terminal GO:0016747 GYO_2662 fbfa663a8f43c14834745c6a53ff0b74 393 Gene3D G3DSA:3.40.47.10 5 276 6.9E-142 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 GYO_2662 fbfa663a8f43c14834745c6a53ff0b74 393 PIRSF PIRSF000429 1 393 3.3E-116 T 14-10-2018 IPR002155 Thiolase GO:0016747 GYO_1943 88fec963f70c442fde2a418c77bbd29f 249 Gene3D G3DSA:1.10.1520.10 19 165 1.4E-47 T 14-10-2018 IPR036389 Ribonuclease III, endonuclease domain superfamily GO:0004525|GO:0006396 GYO_1943 88fec963f70c442fde2a418c77bbd29f 249 ProSitePatterns PS00517 Ribonuclease III family signature. 59 67 - T 14-10-2018 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 Reactome: R-HSA-203927 GYO_1943 88fec963f70c442fde2a418c77bbd29f 249 Pfam PF14622 Ribonuclease-III-like 33 163 3.7E-36 T 14-10-2018 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 Reactome: R-HSA-203927 GYO_1943 88fec963f70c442fde2a418c77bbd29f 249 SMART SM00358 176 243 5.5E-23 T 14-10-2018 IPR014720 Double-stranded RNA-binding domain GYO_1943 88fec963f70c442fde2a418c77bbd29f 249 SMART SM00535 35 170 8.9E-62 T 14-10-2018 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 Reactome: R-HSA-203927 GYO_1943 88fec963f70c442fde2a418c77bbd29f 249 Pfam PF00035 Double-stranded RNA binding motif 177 242 1.6E-16 T 14-10-2018 IPR014720 Double-stranded RNA-binding domain GYO_1943 88fec963f70c442fde2a418c77bbd29f 249 SUPERFAMILY SSF69065 17 177 1.29E-52 T 14-10-2018 IPR036389 Ribonuclease III, endonuclease domain superfamily GO:0004525|GO:0006396 GYO_1943 88fec963f70c442fde2a418c77bbd29f 249 SUPERFAMILY SSF54768 132 244 2.83E-23 T 14-10-2018 GYO_1943 88fec963f70c442fde2a418c77bbd29f 249 Hamap MF_00104 Ribonuclease 3 [rnc]. 23 239 31.653 T 14-10-2018 IPR011907 Ribonuclease III GO:0003723|GO:0004525|GO:0016075 Reactome: R-HSA-203927 GYO_1943 88fec963f70c442fde2a418c77bbd29f 249 TIGRFAM TIGR02191 RNaseIII: ribonuclease III 23 242 1.6E-80 T 14-10-2018 IPR011907 Ribonuclease III GO:0003723|GO:0004525|GO:0016075 Reactome: R-HSA-203927 GYO_1943 88fec963f70c442fde2a418c77bbd29f 249 Gene3D G3DSA:3.30.160.20 175 242 2.3E-22 T 14-10-2018 GYO_3626 991fa38c5f14a0939c7aac578ad6d258 263 Gene3D G3DSA:3.40.50.720 2 260 2.5E-73 T 14-10-2018 GYO_3626 991fa38c5f14a0939c7aac578ad6d258 263 Pfam PF00106 short chain dehydrogenase 8 195 1.2E-50 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR GYO_3626 991fa38c5f14a0939c7aac578ad6d258 263 SUPERFAMILY SSF51735 6 259 2.7E-71 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily GYO_3626 991fa38c5f14a0939c7aac578ad6d258 263 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 141 169 - T 14-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 GYO_3626 991fa38c5f14a0939c7aac578ad6d258 263 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 175 192 2.6E-33 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR GYO_3626 991fa38c5f14a0939c7aac578ad6d258 263 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 81 92 2.6E-33 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR GYO_3626 991fa38c5f14a0939c7aac578ad6d258 263 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 9 26 2.6E-33 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR GYO_3626 991fa38c5f14a0939c7aac578ad6d258 263 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 154 173 2.6E-33 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR GYO_3626 991fa38c5f14a0939c7aac578ad6d258 263 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 128 144 2.6E-33 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR GYO_3626 991fa38c5f14a0939c7aac578ad6d258 263 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 223 243 2.6E-33 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR GYO_3626 991fa38c5f14a0939c7aac578ad6d258 263 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 154 173 3.4E-8 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR GYO_3626 991fa38c5f14a0939c7aac578ad6d258 263 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 134 142 3.4E-8 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR GYO_3626 991fa38c5f14a0939c7aac578ad6d258 263 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 81 92 3.4E-8 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR GYO_0118 edf402b9aacbd3f8ac39d987ccd102be 483 Hamap MF_00022 Glutamate--tRNA ligase [gltX]. 4 483 34.282 T 14-10-2018 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial GO:0000166|GO:0004818|GO:0005524|GO:0005737|GO:0006424 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 GYO_0118 edf402b9aacbd3f8ac39d987ccd102be 483 TIGRFAM TIGR00464 gltX_bact: glutamate--tRNA ligase 4 481 3.5E-210 T 14-10-2018 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial GO:0000166|GO:0004818|GO:0005524|GO:0005737|GO:0006424 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 GYO_0118 edf402b9aacbd3f8ac39d987ccd102be 483 SUPERFAMILY SSF52374 5 316 2.15E-114 T 14-10-2018 GYO_0118 edf402b9aacbd3f8ac39d987ccd102be 483 PRINTS PR00987 Glutamyl-tRNA synthetase signature 37 50 1.4E-29 T 14-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 GYO_0118 edf402b9aacbd3f8ac39d987ccd102be 483 PRINTS PR00987 Glutamyl-tRNA synthetase signature 210 218 1.4E-29 T 14-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 GYO_0118 edf402b9aacbd3f8ac39d987ccd102be 483 PRINTS PR00987 Glutamyl-tRNA synthetase signature 22 33 1.4E-29 T 14-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 GYO_0118 edf402b9aacbd3f8ac39d987ccd102be 483 PRINTS PR00987 Glutamyl-tRNA synthetase signature 194 204 1.4E-29 T 14-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 GYO_0118 edf402b9aacbd3f8ac39d987ccd102be 483 PRINTS PR00987 Glutamyl-tRNA synthetase signature 8 20 1.4E-29 T 14-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 GYO_0118 edf402b9aacbd3f8ac39d987ccd102be 483 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 11 22 - T 14-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 GYO_0118 edf402b9aacbd3f8ac39d987ccd102be 483 SUPERFAMILY SSF48163 298 482 3.79E-50 T 14-10-2018 IPR008925 Aminoacyl-tRNA synthetase, class I, anticodon-binding GO:0000049 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 GYO_0118 edf402b9aacbd3f8ac39d987ccd102be 483 Gene3D G3DSA:3.40.50.620 1 332 2.4E-144 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold GYO_0118 edf402b9aacbd3f8ac39d987ccd102be 483 Gene3D G3DSA:1.10.10.350 390 483 8.4E-36 T 14-10-2018 IPR020751 Aminoacyl-tRNA synthetase, class I, anticodon-binding domain, subdomain 2 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 GYO_0118 edf402b9aacbd3f8ac39d987ccd102be 483 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 4 323 1.9E-130 T 14-10-2018 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0004812|GO:0005524|GO:0043039 GYO_0553 5ba8aae5f115a266745bc09a0cc11866 242 SUPERFAMILY SSF52540 24 211 1.9E-22 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase GYO_0553 5ba8aae5f115a266745bc09a0cc11866 242 Gene3D G3DSA:3.40.50.300 92 205 1.5E-10 T 14-10-2018 GYO_0553 5ba8aae5f115a266745bc09a0cc11866 242 Gene3D G3DSA:3.40.50.300 18 89 2.9E-7 T 14-10-2018 GYO_0553 5ba8aae5f115a266745bc09a0cc11866 242 Pfam PF13476 AAA domain 30 57 3.6E-7 T 14-10-2018 IPR038729 Rad50/SbcC-type AAA domain GYO_0553 5ba8aae5f115a266745bc09a0cc11866 242 Pfam PF13175 AAA ATPase domain 139 195 3.3E-9 T 14-10-2018 GYO_0553 5ba8aae5f115a266745bc09a0cc11866 242 SMART SM00382 35 217 2.2E-5 T 14-10-2018 IPR003593 AAA+ ATPase domain GYO_1409 2fc277e53851e0278c9cfec20e9edad4 282 Pfam PF13509 S1 domain 4 62 8.7E-21 T 14-10-2018 IPR039566 Conserved virulence factor B, S1 domain GYO_1409 2fc277e53851e0278c9cfec20e9edad4 282 Gene3D G3DSA:2.40.50.140 151 218 1.3E-19 T 14-10-2018 GYO_1409 2fc277e53851e0278c9cfec20e9edad4 282 SMART SM00316 2 62 0.68 T 14-10-2018 IPR022967 RNA-binding domain, S1 GYO_1409 2fc277e53851e0278c9cfec20e9edad4 282 SMART SM00316 149 211 4.0E-5 T 14-10-2018 IPR022967 RNA-binding domain, S1 GYO_1409 2fc277e53851e0278c9cfec20e9edad4 282 SMART SM00316 67 133 43.0 T 14-10-2018 IPR022967 RNA-binding domain, S1 GYO_1409 2fc277e53851e0278c9cfec20e9edad4 282 Gene3D G3DSA:2.40.50.140 71 148 9.8E-26 T 14-10-2018 GYO_1409 2fc277e53851e0278c9cfec20e9edad4 282 PIRSF PIRSF012524 1 282 5.4E-121 T 14-10-2018 IPR014464 Conserved virulence factor B GYO_1409 2fc277e53851e0278c9cfec20e9edad4 282 Gene3D G3DSA:1.10.10.10 220 279 3.7E-24 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily GYO_1409 2fc277e53851e0278c9cfec20e9edad4 282 SUPERFAMILY SSF50249 141 210 2.01E-5 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold GYO_3188 ffe5af2ef5c47f3af6adae6d59e4e42a 461 ProSitePatterns PS00163 Fumarate lyases signature. 276 285 - T 14-10-2018 IPR020557 Fumarate lyase, conserved site GO:0003824 GYO_3188 ffe5af2ef5c47f3af6adae6d59e4e42a 461 Pfam PF14698 Argininosuccinate lyase C-terminal 364 432 2.5E-25 T 14-10-2018 IPR029419 Argininosuccinate lyase, C-terminal KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 GYO_3188 ffe5af2ef5c47f3af6adae6d59e4e42a 461 PRINTS PR00149 Fumarate lyase superfamily signature 232 259 3.1E-29 T 14-10-2018 IPR000362 Fumarate lyase family GYO_3188 ffe5af2ef5c47f3af6adae6d59e4e42a 461 PRINTS PR00149 Fumarate lyase superfamily signature 103 121 3.1E-29 T 14-10-2018 IPR000362 Fumarate lyase family GYO_3188 ffe5af2ef5c47f3af6adae6d59e4e42a 461 PRINTS PR00149 Fumarate lyase superfamily signature 276 292 3.1E-29 T 14-10-2018 IPR000362 Fumarate lyase family GYO_3188 ffe5af2ef5c47f3af6adae6d59e4e42a 461 PRINTS PR00149 Fumarate lyase superfamily signature 148 166 3.1E-29 T 14-10-2018 IPR000362 Fumarate lyase family GYO_3188 ffe5af2ef5c47f3af6adae6d59e4e42a 461 TIGRFAM TIGR00838 argH: argininosuccinate lyase 4 456 6.9E-220 T 14-10-2018 IPR009049 Argininosuccinate lyase GO:0004056|GO:0042450 KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 GYO_3188 ffe5af2ef5c47f3af6adae6d59e4e42a 461 Gene3D G3DSA:1.20.200.10 120 448 2.1E-196 T 14-10-2018 GYO_3188 ffe5af2ef5c47f3af6adae6d59e4e42a 461 Gene3D G3DSA:1.10.40.30 361 433 2.1E-196 T 14-10-2018 GYO_3188 ffe5af2ef5c47f3af6adae6d59e4e42a 461 Pfam PF00206 Lyase 7 301 1.3E-73 T 14-10-2018 IPR022761 Fumarate lyase, N-terminal GYO_3188 ffe5af2ef5c47f3af6adae6d59e4e42a 461 Hamap MF_00006 Argininosuccinate lyase [argH]. 3 454 44.813 T 14-10-2018 IPR009049 Argininosuccinate lyase GO:0004056|GO:0042450 KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 GYO_3188 ffe5af2ef5c47f3af6adae6d59e4e42a 461 SUPERFAMILY SSF48557 4 454 8.48E-152 T 14-10-2018 IPR008948 L-Aspartase-like GO:0003824 GYO_3188 ffe5af2ef5c47f3af6adae6d59e4e42a 461 Gene3D G3DSA:1.10.275.10 26 230 2.1E-196 T 14-10-2018 IPR024083 Fumarase/histidase, N-terminal GYO_3188 ffe5af2ef5c47f3af6adae6d59e4e42a 461 PRINTS PR00145 Argininosuccinate lyase family signature 194 210 1.6E-68 T 14-10-2018 GYO_3188 ffe5af2ef5c47f3af6adae6d59e4e42a 461 PRINTS PR00145 Argininosuccinate lyase family signature 311 330 1.6E-68 T 14-10-2018 GYO_3188 ffe5af2ef5c47f3af6adae6d59e4e42a 461 PRINTS PR00145 Argininosuccinate lyase family signature 102 124 1.6E-68 T 14-10-2018 GYO_3188 ffe5af2ef5c47f3af6adae6d59e4e42a 461 PRINTS PR00145 Argininosuccinate lyase family signature 276 292 1.6E-68 T 14-10-2018 GYO_3188 ffe5af2ef5c47f3af6adae6d59e4e42a 461 PRINTS PR00145 Argininosuccinate lyase family signature 143 163 1.6E-68 T 14-10-2018 GYO_3188 ffe5af2ef5c47f3af6adae6d59e4e42a 461 PRINTS PR00145 Argininosuccinate lyase family signature 232 256 1.6E-68 T 14-10-2018 GYO_4225 d99d9a48e38ba1144a0c827c1542d286 272 Hamap MF_00228 Hydroxyethylthiazole kinase [thiM]. 12 261 33.324 T 14-10-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 GYO_4225 d99d9a48e38ba1144a0c827c1542d286 272 SUPERFAMILY SSF53613 9 267 3.43E-57 T 14-10-2018 IPR029056 Ribokinase-like GYO_4225 d99d9a48e38ba1144a0c827c1542d286 272 PIRSF PIRSF000513 4 269 5.6E-101 T 14-10-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 GYO_4225 d99d9a48e38ba1144a0c827c1542d286 272 TIGRFAM TIGR00694 thiM: hydroxyethylthiazole kinase 10 260 7.5E-102 T 14-10-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 GYO_4225 d99d9a48e38ba1144a0c827c1542d286 272 Gene3D G3DSA:3.40.1190.20 1 272 9.7E-101 T 14-10-2018 IPR029056 Ribokinase-like GYO_4225 d99d9a48e38ba1144a0c827c1542d286 272 PRINTS PR01099 Hydroxyethylthiazole kinase family signature 18 25 2.4E-43 T 14-10-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 GYO_4225 d99d9a48e38ba1144a0c827c1542d286 272 PRINTS PR01099 Hydroxyethylthiazole kinase family signature 31 52 2.4E-43 T 14-10-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 GYO_4225 d99d9a48e38ba1144a0c827c1542d286 272 PRINTS PR01099 Hydroxyethylthiazole kinase family signature 88 105 2.4E-43 T 14-10-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 GYO_4225 d99d9a48e38ba1144a0c827c1542d286 272 PRINTS PR01099 Hydroxyethylthiazole kinase family signature 119 133 2.4E-43 T 14-10-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 GYO_4225 d99d9a48e38ba1144a0c827c1542d286 272 PRINTS PR01099 Hydroxyethylthiazole kinase family signature 62 70 2.4E-43 T 14-10-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 GYO_4225 d99d9a48e38ba1144a0c827c1542d286 272 PRINTS PR01099 Hydroxyethylthiazole kinase family signature 164 181 2.4E-43 T 14-10-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 GYO_4225 d99d9a48e38ba1144a0c827c1542d286 272 Pfam PF02110 Hydroxyethylthiazole kinase family 10 257 1.2E-99 T 14-10-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 GYO_3340 0d0402b8c09653ce5cad0c7c9f0d1557 272 Pfam PF00483 Nucleotidyl transferase 4 264 6.8E-35 T 14-10-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 GYO_3340 0d0402b8c09653ce5cad0c7c9f0d1557 272 Gene3D G3DSA:3.90.550.10 1 271 3.2E-73 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases GYO_3340 0d0402b8c09653ce5cad0c7c9f0d1557 272 SUPERFAMILY SSF53448 3 267 2.62E-57 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases GYO_3567 f93314eb812c482c1fee7d311a7522f7 465 SUPERFAMILY SSF101960 32 462 1.96E-140 T 14-10-2018 IPR037284 SUF system FeS cluster assembly, SufBD superfamily GYO_3567 f93314eb812c482c1fee7d311a7522f7 465 TIGRFAM TIGR01980 sufB: FeS assembly protein SufB 10 456 2.1E-232 T 14-10-2018 IPR010231 SUF system FeS cluster assembly, SufB GO:0016226 GYO_3567 f93314eb812c482c1fee7d311a7522f7 465 Pfam PF01458 Uncharacterized protein family (UPF0051) 211 436 2.7E-74 T 14-10-2018 IPR000825 SUF system FeS cluster assembly, SufBD GO:0016226 GYO_2303 3b0888c6f42132222e018a723509fa92 239 Pfam PF12833 Helix-turn-helix domain 154 232 5.7E-20 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 GYO_2303 3b0888c6f42132222e018a723509fa92 239 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 185 227 - T 14-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 GYO_2303 3b0888c6f42132222e018a723509fa92 239 Gene3D G3DSA:1.10.10.60 182 237 1.3E-15 T 14-10-2018 GYO_2303 3b0888c6f42132222e018a723509fa92 239 Pfam PF07883 Cupin domain 20 76 2.4E-10 T 14-10-2018 IPR013096 Cupin 2, conserved barrel GYO_2303 3b0888c6f42132222e018a723509fa92 239 Gene3D G3DSA:1.10.10.60 132 181 3.1E-14 T 14-10-2018 GYO_2303 3b0888c6f42132222e018a723509fa92 239 SMART SM00342 148 231 6.8E-26 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 GYO_2303 3b0888c6f42132222e018a723509fa92 239 SUPERFAMILY SSF46689 184 234 2.9E-11 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 GYO_2303 3b0888c6f42132222e018a723509fa92 239 SUPERFAMILY SSF51182 20 104 1.57E-14 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily GYO_2303 3b0888c6f42132222e018a723509fa92 239 SUPERFAMILY SSF46689 137 181 1.52E-7 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 GYO_2303 3b0888c6f42132222e018a723509fa92 239 Gene3D G3DSA:2.60.120.10 3 81 7.8E-12 T 14-10-2018 IPR014710 RmlC-like jelly roll fold GYO_2950 f433c4b6cc12f4cf831c9e98333b2e0a 285 Pfam PF11738 Protein of unknown function (DUF3298) 190 272 7.1E-20 T 14-10-2018 IPR021729 Domain of unknown function DUF3298 GYO_2950 f433c4b6cc12f4cf831c9e98333b2e0a 285 Gene3D G3DSA:3.30.565.40 76 186 4.3E-30 T 14-10-2018 GYO_2950 f433c4b6cc12f4cf831c9e98333b2e0a 285 Pfam PF13739 Domain of unknown function (DUF4163) 85 160 2.6E-8 T 14-10-2018 IPR025303 Deacetylase PdaC GYO_2950 f433c4b6cc12f4cf831c9e98333b2e0a 285 Gene3D G3DSA:3.90.640.20 187 285 3.5E-43 T 14-10-2018 IPR037126 PdaC/RsiV-like superfamily GYO_1000 d1a03c60551a59c296e78349aff1d3bd 629 Gene3D G3DSA:3.40.50.300 282 550 6.3E-62 T 14-10-2018 GYO_1000 d1a03c60551a59c296e78349aff1d3bd 629 Gene3D G3DSA:3.40.50.300 2 281 1.1E-71 T 14-10-2018 GYO_1000 d1a03c60551a59c296e78349aff1d3bd 629 Pfam PF00005 ABC transporter 20 187 3.2E-28 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 GYO_1000 d1a03c60551a59c296e78349aff1d3bd 629 Pfam PF12848 ABC transporter 226 300 7.1E-14 T 14-10-2018 IPR032781 ABC-transporter extension domain GYO_1000 d1a03c60551a59c296e78349aff1d3bd 629 ProSitePatterns PS00211 ABC transporters family signature. 159 173 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 GYO_1000 d1a03c60551a59c296e78349aff1d3bd 629 Pfam PF16326 ABC transporter C-terminal domain 556 621 1.7E-17 T 14-10-2018 IPR032524 ABC transporter Uup, C-terminal GO:0003677 GYO_1000 d1a03c60551a59c296e78349aff1d3bd 629 Gene3D G3DSA:1.10.287.380 551 625 1.2E-11 T 14-10-2018 IPR037118 Valyl-tRNA synthetase, tRNA-binding arm superfamily GO:0000166|GO:0004832|GO:0005524|GO:0005737|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: R-HSA-379716 GYO_1000 d1a03c60551a59c296e78349aff1d3bd 629 SUPERFAMILY SSF52540 3 248 7.27E-51 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase GYO_1000 d1a03c60551a59c296e78349aff1d3bd 629 SUPERFAMILY SSF52540 312 516 1.78E-48 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase GYO_1000 d1a03c60551a59c296e78349aff1d3bd 629 Pfam PF00005 ABC transporter 341 469 5.5E-22 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 GYO_1000 d1a03c60551a59c296e78349aff1d3bd 629 SMART SM00382 343 514 3.0E-10 T 14-10-2018 IPR003593 AAA+ ATPase domain GYO_1000 d1a03c60551a59c296e78349aff1d3bd 629 SMART SM00382 28 232 2.2E-13 T 14-10-2018 IPR003593 AAA+ ATPase domain GYO_4255 bf7056e28958b15e605a4b0bcfd7ccec 252 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 139 167 - T 14-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 GYO_4255 bf7056e28958b15e605a4b0bcfd7ccec 252 Pfam PF00106 short chain dehydrogenase 6 197 1.2E-56 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR GYO_4255 bf7056e28958b15e605a4b0bcfd7ccec 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 77 88 1.9E-16 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR GYO_4255 bf7056e28958b15e605a4b0bcfd7ccec 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 126 142 1.9E-16 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR GYO_4255 bf7056e28958b15e605a4b0bcfd7ccec 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 1.9E-16 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR GYO_4255 bf7056e28958b15e605a4b0bcfd7ccec 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 152 171 1.9E-16 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR GYO_4255 bf7056e28958b15e605a4b0bcfd7ccec 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 173 190 1.9E-16 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR GYO_4255 bf7056e28958b15e605a4b0bcfd7ccec 252 SUPERFAMILY SSF51735 1 225 5.0E-52 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily GYO_4255 bf7056e28958b15e605a4b0bcfd7ccec 252 Gene3D G3DSA:3.40.50.720 1 252 3.0E-53 T 14-10-2018 GYO_4255 bf7056e28958b15e605a4b0bcfd7ccec 252 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 77 88 3.6E-5 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR GYO_4255 bf7056e28958b15e605a4b0bcfd7ccec 252 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 152 171 3.6E-5 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR GYO_1953 07987b2cb5bb65e5718f211a1e1f35e8 243 TIGRFAM TIGR00088 trmD: tRNA (guanine(37)-N(1))-methyltransferase 1 235 8.0E-111 T 14-10-2018 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 GYO_1953 07987b2cb5bb65e5718f211a1e1f35e8 243 Gene3D G3DSA:3.40.1280.10 1 164 1.3E-69 T 14-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal GYO_1953 07987b2cb5bb65e5718f211a1e1f35e8 243 Gene3D G3DSA:1.10.1270.20 165 243 1.6E-33 T 14-10-2018 IPR023148 tRNA (guanine-N1-)-methyltransferase, C-terminal GO:0008033|GO:0052906 MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 GYO_1953 07987b2cb5bb65e5718f211a1e1f35e8 243 Pfam PF01746 tRNA (Guanine-1)-methyltransferase 23 221 3.2E-78 T 14-10-2018 IPR016009 tRNA methyltransferase TRMD/TRM10-type domain MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 GYO_1953 07987b2cb5bb65e5718f211a1e1f35e8 243 PIRSF PIRSF000386 1 243 1.8E-104 T 14-10-2018 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 GYO_1953 07987b2cb5bb65e5718f211a1e1f35e8 243 Hamap MF_00605 tRNA (guanine-N(1)-)-methyltransferase [trmD]. 1 243 113.974 T 14-10-2018 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 GYO_1953 07987b2cb5bb65e5718f211a1e1f35e8 243 SUPERFAMILY SSF75217 1 242 4.58E-103 T 14-10-2018 IPR029028 Alpha/beta knot methyltransferases GYO_0882 32e302f7ef6d968365515acc77e8b9db 348 SUPERFAMILY SSF69304 44 345 4.71E-20 T 14-10-2018 GYO_0882 32e302f7ef6d968365515acc77e8b9db 348 Gene3D G3DSA:2.120.10.30 203 343 2.0E-7 T 14-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like GYO_0882 32e302f7ef6d968365515acc77e8b9db 348 Gene3D G3DSA:2.120.10.30 44 183 1.6E-5 T 14-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like GYO_0882 32e302f7ef6d968365515acc77e8b9db 348 Pfam PF07676 WD40-like Beta Propeller Repeat 282 300 0.11 T 14-10-2018 IPR011659 WD40-like Beta Propeller GYO_0778 36c7eadc8fcb4d5ddf1d2d855067a3b8 723 Pfam PF03176 MMPL family 420 690 6.5E-38 T 14-10-2018 IPR004869 Membrane transport protein MMPL domain GO:0016020 GYO_0778 36c7eadc8fcb4d5ddf1d2d855067a3b8 723 Pfam PF03176 MMPL family 45 361 3.0E-79 T 14-10-2018 IPR004869 Membrane transport protein MMPL domain GO:0016020 GYO_0778 36c7eadc8fcb4d5ddf1d2d855067a3b8 723 SUPERFAMILY SSF82866 141 334 2.22E-28 T 14-10-2018 GYO_0778 36c7eadc8fcb4d5ddf1d2d855067a3b8 723 SUPERFAMILY SSF82866 453 686 7.72E-28 T 14-10-2018 GYO_0778 36c7eadc8fcb4d5ddf1d2d855067a3b8 723 Gene3D G3DSA:1.20.1640.10 175 346 1.7E-9 T 14-10-2018 GYO_2748 ac01e82612101c436184de8aba895714 638 Gene3D G3DSA:3.40.720.10 238 546 1.3E-76 T 14-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 GYO_2748 ac01e82612101c436184de8aba895714 638 Pfam PF00884 Sulfatase 245 536 5.3E-36 T 14-10-2018 IPR000917 Sulfatase, N-terminal GO:0008484 GYO_2748 ac01e82612101c436184de8aba895714 638 SUPERFAMILY SSF53649 243 621 6.54E-72 T 14-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 GYO_2748 ac01e82612101c436184de8aba895714 638 PIRSF PIRSF005091 1 620 4.0E-212 T 14-10-2018 IPR012160 Lipoteichoic acid synthase-like GYO_2586 858e73d0b4c11c488972018be5504035 296 Gene3D G3DSA:1.10.150.130 1 98 2.1E-22 T 14-10-2018 IPR010998 Integrase/recombinase, N-terminal GYO_2586 858e73d0b4c11c488972018be5504035 296 Hamap MF_01808 Tyrosine recombinase XerC [xerC]. 3 296 56.503 T 14-10-2018 IPR023009 Tyrosine recombinase XerC/XerD GYO_2586 858e73d0b4c11c488972018be5504035 296 Pfam PF00589 Phage integrase family 110 282 3.9E-57 T 14-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 GYO_2586 858e73d0b4c11c488972018be5504035 296 SUPERFAMILY SSF56349 106 294 1.18E-59 T 14-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 GYO_2586 858e73d0b4c11c488972018be5504035 296 Pfam PF02899 Phage integrase, N-terminal SAM-like domain 5 89 3.6E-24 T 14-10-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 GYO_2586 858e73d0b4c11c488972018be5504035 296 Gene3D G3DSA:1.10.443.10 110 290 2.5E-68 T 14-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 GYO_2586 858e73d0b4c11c488972018be5504035 296 SUPERFAMILY SSF47823 4 99 8.83E-20 T 14-10-2018 GYO_2586 858e73d0b4c11c488972018be5504035 296 Hamap MF_01807 Tyrosine recombinase XerD [xerD]. 1 296 65.043 T 14-10-2018 IPR011932 Tyrosine recombinase XerD GO:0006310|GO:0009009 GYO_2586 858e73d0b4c11c488972018be5504035 296 TIGRFAM TIGR02225 recomb_XerD: tyrosine recombinase XerD 7 296 7.3E-121 T 14-10-2018 IPR011932 Tyrosine recombinase XerD GO:0006310|GO:0009009 GYO_0068 7457edf522eaafc0f0635a5ab00ec9dc 532 Pfam PF01943 Polysaccharide biosynthesis protein 12 308 1.2E-65 T 14-10-2018 IPR002797 Polysaccharide biosynthesis protein GO:0016020 GYO_0068 7457edf522eaafc0f0635a5ab00ec9dc 532 Pfam PF14667 Polysaccharide biosynthesis C-terminal domain 359 504 4.6E-26 T 14-10-2018 IPR029303 Polysaccharide biosynthesis protein, C-terminal domain GYO_0068 7457edf522eaafc0f0635a5ab00ec9dc 532 PIRSF PIRSF038958 7 522 1.1E-78 T 14-10-2018 IPR024923 Peptidoglycan biosynthesis protein, SpoVB-type GYO_0922 1c605850d1f46952dcf96be4de72ff9e 228 SUPERFAMILY SSF51395 6 221 2.93E-47 T 14-10-2018 GYO_0922 1c605850d1f46952dcf96be4de72ff9e 228 Hamap MF_00112 Geranylgeranylglyceryl phosphate synthase [pcrB]. 3 225 28.272 T 14-10-2018 IPR008205 Geranylgeranylglyceryl phosphate synthase/Heptaprenylglyceryl phosphate synthase GO:0016765 GYO_0922 1c605850d1f46952dcf96be4de72ff9e 228 Pfam PF01884 PcrB family 2 225 1.3E-102 T 14-10-2018 IPR008205 Geranylgeranylglyceryl phosphate synthase/Heptaprenylglyceryl phosphate synthase GO:0016765 GYO_0922 1c605850d1f46952dcf96be4de72ff9e 228 TIGRFAM TIGR01768 GGGP-family: geranylgeranylglyceryl phosphate synthase family protein 9 222 5.9E-67 T 14-10-2018 IPR008205 Geranylgeranylglyceryl phosphate synthase/Heptaprenylglyceryl phosphate synthase GO:0016765 GYO_0922 1c605850d1f46952dcf96be4de72ff9e 228 Gene3D G3DSA:3.20.20.390 1 228 2.6E-90 T 14-10-2018 IPR038597 GGGP/HepGP synthase superfamily GYO_3279 7d9cce9b633a9453f62ef0f0ddb99ba6 432 SUPERFAMILY SSF51735 2 167 1.92E-54 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily GYO_3279 7d9cce9b633a9453f62ef0f0ddb99ba6 432 PRINTS PR00732 Glycosyl hydrolase family 4 signature 110 130 1.2E-42 T 14-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 GYO_3279 7d9cce9b633a9453f62ef0f0ddb99ba6 432 PRINTS PR00732 Glycosyl hydrolase family 4 signature 3 18 1.2E-42 T 14-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 GYO_3279 7d9cce9b633a9453f62ef0f0ddb99ba6 432 PRINTS PR00732 Glycosyl hydrolase family 4 signature 190 202 1.2E-42 T 14-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 GYO_3279 7d9cce9b633a9453f62ef0f0ddb99ba6 432 PRINTS PR00732 Glycosyl hydrolase family 4 signature 94 107 1.2E-42 T 14-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 GYO_3279 7d9cce9b633a9453f62ef0f0ddb99ba6 432 PRINTS PR00732 Glycosyl hydrolase family 4 signature 139 156 1.2E-42 T 14-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 GYO_3279 7d9cce9b633a9453f62ef0f0ddb99ba6 432 PRINTS PR00732 Glycosyl hydrolase family 4 signature 72 88 1.2E-42 T 14-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 GYO_3279 7d9cce9b633a9453f62ef0f0ddb99ba6 432 PRINTS PR00732 Glycosyl hydrolase family 4 signature 164 175 1.2E-42 T 14-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 GYO_3279 7d9cce9b633a9453f62ef0f0ddb99ba6 432 Pfam PF11975 Family 4 glycosyl hydrolase C-terminal domain 194 404 6.2E-66 T 14-10-2018 IPR022616 Glycosyl hydrolase, family 4, C-terminal GO:0004553 GYO_3279 7d9cce9b633a9453f62ef0f0ddb99ba6 432 ProSitePatterns PS01324 Glycosyl hydrolases family 4 signature. 139 169 - T 14-10-2018 IPR019802 Glycoside hydrolase, family 4, conserved site GO:0004553|GO:0005975 GYO_3279 7d9cce9b633a9453f62ef0f0ddb99ba6 432 SUPERFAMILY SSF56327 168 432 3.37E-74 T 14-10-2018 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 GYO_3279 7d9cce9b633a9453f62ef0f0ddb99ba6 432 Pfam PF02056 Family 4 glycosyl hydrolase 3 184 2.6E-77 T 14-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 GYO_3279 7d9cce9b633a9453f62ef0f0ddb99ba6 432 Gene3D G3DSA:3.90.1820.20 1 427 2.8E-144 T 14-10-2018 GYO_3648 a282b290b8005d322279531f95a98e62 309 Gene3D G3DSA:3.40.190.10 163 258 4.0E-11 T 14-10-2018 GYO_3648 a282b290b8005d322279531f95a98e62 309 Pfam PF12727 PBP superfamily domain 109 271 4.2E-54 T 14-10-2018 IPR024370 PBP domain GYO_3648 a282b290b8005d322279531f95a98e62 309 Gene3D G3DSA:1.10.1660.10 5 56 5.7E-11 T 14-10-2018 GYO_3648 a282b290b8005d322279531f95a98e62 309 TIGRFAM TIGR01764 excise: DNA binding domain, excisionase family 8 53 8.8E-18 T 14-10-2018 IPR010093 SinI-like, DNA-binding domain GO:0003677 GYO_3648 a282b290b8005d322279531f95a98e62 309 SUPERFAMILY SSF53850 121 298 2.36E-19 T 14-10-2018 GYO_3648 a282b290b8005d322279531f95a98e62 309 SUPERFAMILY SSF46955 8 55 7.32E-6 T 14-10-2018 IPR009061 Putative DNA-binding domain superfamily GYO_3648 a282b290b8005d322279531f95a98e62 309 Pfam PF12728 Helix-turn-helix domain 8 54 8.9E-14 T 14-10-2018 GYO_3308 edc60eadf845da8f3651e6b8820188b5 527 Gene3D G3DSA:3.40.449.10 28 213 6.8E-228 T 14-10-2018 IPR008210 Phosphoenolpyruvate carboxykinase, N-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: R-HSA-70263 GYO_3308 edc60eadf845da8f3651e6b8820188b5 527 Pfam PF01293 Phosphoenolpyruvate carboxykinase 18 480 2.9E-226 T 14-10-2018 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117 GYO_3308 edc60eadf845da8f3651e6b8820188b5 527 Gene3D G3DSA:2.170.8.10 38 330 6.8E-228 T 14-10-2018 GYO_3308 edc60eadf845da8f3651e6b8820188b5 527 Gene3D G3DSA:3.90.228.20 214 513 6.8E-228 T 14-10-2018 IPR013035 Phosphoenolpyruvate carboxykinase, C-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: R-HSA-70263 GYO_3308 edc60eadf845da8f3651e6b8820188b5 527 ProSitePatterns PS00532 Phosphoenolpyruvate carboxykinase (ATP) signature. 250 265 - T 14-10-2018 IPR015994 Phosphoenolpyruvate carboxykinase (ATP), conserved site GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117 GYO_3308 edc60eadf845da8f3651e6b8820188b5 527 PIRSF PIRSF006294 2 526 1.2E-243 T 14-10-2018 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117 GYO_3308 edc60eadf845da8f3651e6b8820188b5 527 SUPERFAMILY SSF53795 213 521 1.47E-137 T 14-10-2018 GYO_3308 edc60eadf845da8f3651e6b8820188b5 527 Hamap MF_00453 Phosphoenolpyruvate carboxykinase (ATP) [pckA]. 12 527 56.195 T 14-10-2018 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117 GYO_3308 edc60eadf845da8f3651e6b8820188b5 527 SUPERFAMILY SSF68923 11 212 4.53E-80 T 14-10-2018 IPR008210 Phosphoenolpyruvate carboxykinase, N-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: R-HSA-70263 GYO_3308 edc60eadf845da8f3651e6b8820188b5 527 TIGRFAM TIGR00224 pckA: phosphoenolpyruvate carboxykinase (ATP) 1 526 8.9E-289 T 14-10-2018 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117 GYO_3982 e2159d910f2cfb9009e84266574972ea 140 ProDom PD085159 YWQH COILED COIL 1 140 6.0E-48 T 14-10-2018 IPR020326 Uncharacterised protein family YwqH GYO_3982 e2159d910f2cfb9009e84266574972ea 140 Pfam PF16888 Domain of unknown function (DUF5082) 11 105 9.0E-12 T 14-10-2018 IPR031681 Protein of unknown function DUF5082 GYO_0114 4febf35dbe9b937f66c2f46c1b2440d1 360 Pfam PF10635 DisA bacterial checkpoint controller linker region 146 284 1.5E-50 T 14-10-2018 IPR018906 DNA integrity scanning, DisA, linker region GYO_0114 4febf35dbe9b937f66c2f46c1b2440d1 360 Hamap MF_01438 DNA integrity scanning protein DisA [disA]. 7 357 45.255 T 14-10-2018 IPR023763 DNA integrity scanning protein, DisA GYO_0114 4febf35dbe9b937f66c2f46c1b2440d1 360 Gene3D G3DSA:3.40.1700.10 10 146 5.1E-57 T 14-10-2018 IPR036888 DNA integrity scanning protein, DisA, N-terminal domain superfamily GYO_0114 4febf35dbe9b937f66c2f46c1b2440d1 360 SUPERFAMILY SSF47781 246 355 3.18E-12 T 14-10-2018 IPR010994 RuvA domain 2-like GYO_0114 4febf35dbe9b937f66c2f46c1b2440d1 360 Pfam PF02457 DisA bacterial checkpoint controller nucleotide-binding 29 141 1.9E-28 T 14-10-2018 IPR003390 DNA integrity scanning protein, DisA, N-terminal GYO_0114 4febf35dbe9b937f66c2f46c1b2440d1 360 Gene3D G3DSA:1.20.1260.110 147 292 1.1E-46 T 14-10-2018 IPR038331 DisA, linker domain superfamily GYO_0114 4febf35dbe9b937f66c2f46c1b2440d1 360 SUPERFAMILY SSF143597 22 146 2.09E-31 T 14-10-2018 IPR036888 DNA integrity scanning protein, DisA, N-terminal domain superfamily GYO_0114 4febf35dbe9b937f66c2f46c1b2440d1 360 Gene3D G3DSA:1.10.150.20 293 355 8.0E-26 T 14-10-2018 GYO_2152 1b7a731fdb2cdeea187f30e413a7a48d 205 Pfam PF01726 LexA DNA binding domain 1 65 6.2E-29 T 14-10-2018 IPR006199 LexA repressor, DNA-binding domain GO:0004252|GO:0006508 GYO_2152 1b7a731fdb2cdeea187f30e413a7a48d 205 SUPERFAMILY SSF46785 3 70 2.17E-22 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily GYO_2152 1b7a731fdb2cdeea187f30e413a7a48d 205 Hamap MF_00015 LexA repressor [lexA]. 3 204 34.404 T 14-10-2018 IPR006200 Transcription regulator LexA GO:0004252|GO:0009432|GO:0045892 GYO_2152 1b7a731fdb2cdeea187f30e413a7a48d 205 Gene3D G3DSA:1.10.10.10 2 68 3.4E-25 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily GYO_2152 1b7a731fdb2cdeea187f30e413a7a48d 205 Gene3D G3DSA:2.10.109.10 87 204 6.7E-44 T 14-10-2018 GYO_2152 1b7a731fdb2cdeea187f30e413a7a48d 205 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 159 171 6.5E-10 T 14-10-2018 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 GYO_2152 1b7a731fdb2cdeea187f30e413a7a48d 205 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 130 141 6.5E-10 T 14-10-2018 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 GYO_2152 1b7a731fdb2cdeea187f30e413a7a48d 205 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 119 129 6.5E-10 T 14-10-2018 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 GYO_2152 1b7a731fdb2cdeea187f30e413a7a48d 205 Pfam PF00717 Peptidase S24-like 122 188 5.0E-17 T 14-10-2018 IPR015927 Peptidase S24/S26A/S26B/S26C GYO_2152 1b7a731fdb2cdeea187f30e413a7a48d 205 SUPERFAMILY SSF51306 81 202 1.62E-36 T 14-10-2018 IPR036286 LexA/Signal peptidase-like superfamily GYO_2152 1b7a731fdb2cdeea187f30e413a7a48d 205 TIGRFAM TIGR00498 lexA: repressor LexA 1 204 1.1E-89 T 14-10-2018 IPR006200 Transcription regulator LexA GO:0004252|GO:0009432|GO:0045892 GYO_1166 aadaa4243f48226e9bb51993d834847c 590 TIGRFAM TIGR00190 thiC: phosphomethylpyrimidine synthase 132 556 1.8E-228 T 14-10-2018 IPR002817 Phosphomethylpyrimidine synthase ThiC/5-hydroxybenzimidazole synthase BzaA/B GO:0009228|GO:0051536 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 GYO_1166 aadaa4243f48226e9bb51993d834847c 590 Pfam PF13667 ThiC-associated domain 17 93 2.5E-33 T 14-10-2018 IPR025747 ThiC-associated domain KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 GYO_1166 aadaa4243f48226e9bb51993d834847c 590 Hamap MF_00089 Phosphomethylpyrimidine synthase [thiC]. 132 558 100.287 T 14-10-2018 IPR037509 Phosphomethylpyrimidine synthase GO:0009228|GO:0016830 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 GYO_1166 aadaa4243f48226e9bb51993d834847c 590 Pfam PF01964 Radical SAM ThiC family 133 553 2.1E-205 T 14-10-2018 IPR002817 Phosphomethylpyrimidine synthase ThiC/5-hydroxybenzimidazole synthase BzaA/B GO:0009228|GO:0051536 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 GYO_1166 aadaa4243f48226e9bb51993d834847c 590 Gene3D G3DSA:3.20.20.540 176 489 3.3E-157 T 14-10-2018 IPR038521 ThiC/Bza superfamily KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 GYO_1455 c9ae1037a684dba950708a864a89d1e0 218 Pfam PF03741 Integral membrane protein TerC family 11 180 1.8E-45 T 14-10-2018 IPR005496 Integral membrane protein TerC GO:0016021 GYO_1455 c9ae1037a684dba950708a864a89d1e0 218 TIGRFAM TIGR03717 R_switched_YjbE: integral membrane protein, YjbE family 9 181 1.9E-67 T 14-10-2018 IPR022301 Integral membrane protein YjbE GYO_4186 c938868954be17e15ff234200a228d7e 225 TIGRFAM TIGR00628 ung: uracil-DNA glycosylase 7 214 8.5E-87 T 14-10-2018 IPR002043 Uracil-DNA glycosylase family 1 GO:0004844|GO:0006281|GO:0006284 Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 GYO_4186 c938868954be17e15ff234200a228d7e 225 SMART SM00986 50 210 1.5E-33 T 14-10-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 GYO_4186 c938868954be17e15ff234200a228d7e 225 SMART SM00987 50 210 1.5E-33 T 14-10-2018 GYO_4186 c938868954be17e15ff234200a228d7e 225 ProSitePatterns PS00130 Uracil-DNA glycosylase signature. 58 67 - T 14-10-2018 IPR018085 Uracil-DNA glycosylase, active site GO:0006281|GO:0016799 Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 GYO_4186 c938868954be17e15ff234200a228d7e 225 Pfam PF03167 Uracil DNA glycosylase superfamily 53 209 6.7E-26 T 14-10-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 GYO_4186 c938868954be17e15ff234200a228d7e 225 SUPERFAMILY SSF52141 4 222 3.71E-94 T 14-10-2018 IPR036895 Uracil-DNA glycosylase-like domain superfamily Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 GYO_4186 c938868954be17e15ff234200a228d7e 225 Hamap MF_00148 Uracil-DNA glycosylase [ung]. 6 221 40.944 T 14-10-2018 IPR002043 Uracil-DNA glycosylase family 1 GO:0004844|GO:0006281|GO:0006284 Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 GYO_4186 c938868954be17e15ff234200a228d7e 225 Gene3D G3DSA:3.40.470.10 1 225 9.8E-104 T 14-10-2018 IPR036895 Uracil-DNA glycosylase-like domain superfamily Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 GYO_1031 621c10073c4429fa1fc6f25b49bbdf1c 168 Gene3D G3DSA:2.40.33.20 2 168 2.1E-63 T 14-10-2018 GYO_1031 621c10073c4429fa1fc6f25b49bbdf1c 168 SUPERFAMILY SSF50800 6 167 1.1E-58 T 14-10-2018 IPR011037 Pyruvate kinase-like, insert domain superfamily GYO_1031 621c10073c4429fa1fc6f25b49bbdf1c 168 Pfam PF03473 MOSC domain 55 164 3.1E-24 T 14-10-2018 IPR005302 Molybdenum cofactor sulfurase, C-terminal GO:0003824|GO:0030151|GO:0030170 GYO_4190 a58a7daff76ff1d47a5ee30119590937 112 Gene3D G3DSA:1.10.10.10 1 111 2.8E-36 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily GYO_4190 a58a7daff76ff1d47a5ee30119590937 112 SUPERFAMILY SSF46785 13 106 3.41E-32 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily GYO_4190 a58a7daff76ff1d47a5ee30119590937 112 Pfam PF03551 Transcriptional regulator PadR-like family 15 89 5.0E-28 T 14-10-2018 IPR005149 Transcription regulator PadR, N-terminal GYO_1877 e9a61aaec967d21718ca11463cf85534 1433 Gene3D G3DSA:2.60.40.1120 911 986 4.0E-12 T 14-10-2018 GYO_1877 e9a61aaec967d21718ca11463cf85534 1433 Gene3D G3DSA:2.60.40.1120 827 905 6.6E-11 T 14-10-2018 GYO_1877 e9a61aaec967d21718ca11463cf85534 1433 ProSitePatterns PS00138 Serine proteases, subtilase family, serine active site. 450 460 - T 14-10-2018 IPR023828 Peptidase S8, subtilisin, Ser-active site GYO_1877 e9a61aaec967d21718ca11463cf85534 1433 Gene3D G3DSA:2.60.40.10 1241 1322 8.8E-17 T 14-10-2018 IPR013783 Immunoglobulin-like fold GYO_1877 e9a61aaec967d21718ca11463cf85534 1433 Gene3D G3DSA:2.60.40.10 1157 1236 1.3E-9 T 14-10-2018 IPR013783 Immunoglobulin-like fold GYO_1877 e9a61aaec967d21718ca11463cf85534 1433 Gene3D G3DSA:3.40.50.200 190 515 9.7E-80 T 14-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 GYO_1877 e9a61aaec967d21718ca11463cf85534 1433 SUPERFAMILY SSF49464 842 905 2.16E-9 T 14-10-2018 IPR008969 Carboxypeptidase-like, regulatory domain superfamily GYO_1877 e9a61aaec967d21718ca11463cf85534 1433 PRINTS PR00723 Subtilisin serine protease family (S8) signature 449 465 8.9E-15 T 14-10-2018 IPR015500 Peptidase S8, subtilisin-related GYO_1877 e9a61aaec967d21718ca11463cf85534 1433 PRINTS PR00723 Subtilisin serine protease family (S8) signature 218 237 8.9E-15 T 14-10-2018 IPR015500 Peptidase S8, subtilisin-related GYO_1877 e9a61aaec967d21718ca11463cf85534 1433 PRINTS PR00723 Subtilisin serine protease family (S8) signature 270 283 8.9E-15 T 14-10-2018 IPR015500 Peptidase S8, subtilisin-related GYO_1877 e9a61aaec967d21718ca11463cf85534 1433 SUPERFAMILY SSF49464 910 1005 1.23E-14 T 14-10-2018 IPR008969 Carboxypeptidase-like, regulatory domain superfamily GYO_1877 e9a61aaec967d21718ca11463cf85534 1433 SUPERFAMILY SSF49899 636 789 6.33E-11 T 14-10-2018 IPR013320 Concanavalin A-like lectin/glucanase domain superfamily GYO_1877 e9a61aaec967d21718ca11463cf85534 1433 Pfam PF05547 Immune inhibitor A peptidase M6 695 788 9.1E-12 T 14-10-2018 IPR008757 Peptidase M6-like, domain GO:0006508|GO:0008233 GYO_1877 e9a61aaec967d21718ca11463cf85534 1433 PIRSF PIRSF015477 1 1433 0.0 T 14-10-2018 IPR012103 Peptidase S8A, bacillopeptidase F GYO_1877 e9a61aaec967d21718ca11463cf85534 1433 Pfam PF13715 CarboxypepD_reg-like domain 842 906 1.3E-9 T 14-10-2018 GYO_1877 e9a61aaec967d21718ca11463cf85534 1433 Pfam PF13715 CarboxypepD_reg-like domain 911 983 2.4E-11 T 14-10-2018 GYO_1877 e9a61aaec967d21718ca11463cf85534 1433 ProSitePatterns PS00137 Serine proteases, subtilase family, histidine active site. 274 284 - T 14-10-2018 IPR022398 Peptidase S8, subtilisin, His-active site GYO_1877 e9a61aaec967d21718ca11463cf85534 1433 Pfam PF00082 Subtilase family 218 504 2.5E-52 T 14-10-2018 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 GYO_1877 e9a61aaec967d21718ca11463cf85534 1433 SUPERFAMILY SSF52743 199 517 1.24E-70 T 14-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 GYO_1877 e9a61aaec967d21718ca11463cf85534 1433 Pfam PF05922 Peptidase inhibitor I9 68 177 2.7E-9 T 14-10-2018 IPR010259 Peptidase S8 propeptide/proteinase inhibitor I9 Reactome: R-HSA-381426|Reactome: R-HSA-8866427|Reactome: R-HSA-8957275|Reactome: R-HSA-8964038 GYO_0632 a680df039a46d44f2752b62e97a81082 654 Gene3D G3DSA:3.40.710.10 320 654 6.7E-85 T 14-10-2018 GYO_0632 a680df039a46d44f2752b62e97a81082 654 Pfam PF03717 Penicillin-binding Protein dimerisation domain 141 308 9.6E-36 T 14-10-2018 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 GYO_0632 a680df039a46d44f2752b62e97a81082 654 Pfam PF05223 NTF2-like N-terminal transpeptidase domain 12 133 6.6E-38 T 14-10-2018 IPR007887 NTF2-like N-terminal transpeptidase GO:0046677 GYO_0632 a680df039a46d44f2752b62e97a81082 654 Gene3D G3DSA:3.10.450.100 10 128 2.4E-19 T 14-10-2018 GYO_0632 a680df039a46d44f2752b62e97a81082 654 Gene3D G3DSA:3.90.1310.10 141 316 4.1E-51 T 14-10-2018 GYO_0632 a680df039a46d44f2752b62e97a81082 654 SUPERFAMILY SSF54427 14 132 1.14E-30 T 14-10-2018 IPR032710 NTF2-like domain superfamily GYO_0632 a680df039a46d44f2752b62e97a81082 654 Pfam PF00905 Penicillin binding protein transpeptidase domain 338 649 6.4E-76 T 14-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 GYO_0632 a680df039a46d44f2752b62e97a81082 654 SUPERFAMILY SSF56519 134 320 9.68E-40 T 14-10-2018 IPR036138 Penicillin-binding protein, dimerisation domain superfamily GO:0008658 GYO_0632 a680df039a46d44f2752b62e97a81082 654 SUPERFAMILY SSF56601 321 652 6.8E-78 T 14-10-2018 IPR012338 Beta-lactamase/transpeptidase-like GYO_0632 a680df039a46d44f2752b62e97a81082 654 Gene3D G3DSA:3.30.1390.30 162 235 4.1E-51 T 14-10-2018 GYO_1819 8d4fc9e772ad6c5796d87b877d27037c 612 SUPERFAMILY SSF52540 3 208 3.43E-56 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase GYO_1819 8d4fc9e772ad6c5796d87b877d27037c 612 TIGRFAM TIGR01394 TypA_BipA: GTP-binding protein TypA/BipA 7 601 7.0E-291 T 14-10-2018 IPR006298 GTP-binding protein TypA GO:0005525 GYO_1819 8d4fc9e772ad6c5796d87b877d27037c 612 Pfam PF00679 Elongation factor G C-terminus 399 479 7.3E-25 T 14-10-2018 IPR000640 Elongation factor EFG, domain V-like GYO_1819 8d4fc9e772ad6c5796d87b877d27037c 612 SUPERFAMILY SSF54980 304 389 1.33E-15 T 14-10-2018 IPR035647 EF-G domain III/V-like GYO_1819 8d4fc9e772ad6c5796d87b877d27037c 612 SUPERFAMILY SSF50447 154 301 1.1E-32 T 14-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily GYO_1819 8d4fc9e772ad6c5796d87b877d27037c 612 Gene3D G3DSA:3.30.70.240 391 484 5.8E-129 T 14-10-2018 GYO_1819 8d4fc9e772ad6c5796d87b877d27037c 612 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 8 146 9.4E-23 T 14-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 GYO_1819 8d4fc9e772ad6c5796d87b877d27037c 612 Gene3D G3DSA:2.40.50.250 485 601 5.8E-129 T 14-10-2018 GYO_1819 8d4fc9e772ad6c5796d87b877d27037c 612 Pfam PF03144 Elongation factor Tu domain 2 221 291 2.7E-14 T 14-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 GYO_1819 8d4fc9e772ad6c5796d87b877d27037c 612 PRINTS PR00315 GTP-binding elongation factor signature 89 100 3.0E-14 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 GYO_1819 8d4fc9e772ad6c5796d87b877d27037c 612 PRINTS PR00315 GTP-binding elongation factor signature 125 134 3.0E-14 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 GYO_1819 8d4fc9e772ad6c5796d87b877d27037c 612 PRINTS PR00315 GTP-binding elongation factor signature 9 22 3.0E-14 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 GYO_1819 8d4fc9e772ad6c5796d87b877d27037c 612 PRINTS PR00315 GTP-binding elongation factor signature 53 61 3.0E-14 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 GYO_1819 8d4fc9e772ad6c5796d87b877d27037c 612 PRINTS PR00315 GTP-binding elongation factor signature 73 83 3.0E-14 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 GYO_1819 8d4fc9e772ad6c5796d87b877d27037c 612 Gene3D G3DSA:3.40.50.300 4 200 1.2E-67 T 14-10-2018 GYO_1819 8d4fc9e772ad6c5796d87b877d27037c 612 SUPERFAMILY SSF54980 400 515 1.77E-29 T 14-10-2018 IPR035647 EF-G domain III/V-like GYO_1819 8d4fc9e772ad6c5796d87b877d27037c 612 Pfam PF00009 Elongation factor Tu GTP binding domain 6 197 4.1E-57 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 GYO_1819 8d4fc9e772ad6c5796d87b877d27037c 612 Pfam PF14492 Elongation Factor G, domain II 330 379 1.0E-6 T 14-10-2018 GYO_1819 8d4fc9e772ad6c5796d87b877d27037c 612 Gene3D G3DSA:2.40.30.10 201 301 8.1E-34 T 14-10-2018 GYO_1819 8d4fc9e772ad6c5796d87b877d27037c 612 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 46 61 - T 14-10-2018 IPR031157 Tr-type G domain, conserved site GYO_1819 8d4fc9e772ad6c5796d87b877d27037c 612 SMART SM00838 397 482 7.7E-5 T 14-10-2018 IPR000640 Elongation factor EFG, domain V-like GYO_1819 8d4fc9e772ad6c5796d87b877d27037c 612 Gene3D G3DSA:3.30.70.870 308 592 5.8E-129 T 14-10-2018 GYO_0229 3a67590ba67c8539fe9f32b6bb7cd26f 105 Gene3D G3DSA:1.10.720.10 49 101 5.6E-22 T 14-10-2018 GYO_0229 3a67590ba67c8539fe9f32b6bb7cd26f 105 Pfam PF14553 YqbF, hypothetical protein domain 7 45 7.9E-10 T 14-10-2018 IPR027926 Uncharacterised protein YqbF domain GYO_0229 3a67590ba67c8539fe9f32b6bb7cd26f 105 SUPERFAMILY SSF68912 54 104 3.26E-19 T 14-10-2018 IPR036269 Rho termination factor, N-terminal domain superfamily GYO_0229 3a67590ba67c8539fe9f32b6bb7cd26f 105 Gene3D G3DSA:3.40.5.20 1 45 4.8E-17 T 14-10-2018 IPR036840 YqbF domain superfamily GYO_0229 3a67590ba67c8539fe9f32b6bb7cd26f 105 SUPERFAMILY SSF160059 1 45 6.41E-14 T 14-10-2018 GYO_0308 3a67590ba67c8539fe9f32b6bb7cd26f 105 Gene3D G3DSA:1.10.720.10 49 101 5.6E-22 T 14-10-2018 GYO_0308 3a67590ba67c8539fe9f32b6bb7cd26f 105 Pfam PF14553 YqbF, hypothetical protein domain 7 45 7.9E-10 T 14-10-2018 IPR027926 Uncharacterised protein YqbF domain GYO_0308 3a67590ba67c8539fe9f32b6bb7cd26f 105 SUPERFAMILY SSF68912 54 104 3.26E-19 T 14-10-2018 IPR036269 Rho termination factor, N-terminal domain superfamily GYO_0308 3a67590ba67c8539fe9f32b6bb7cd26f 105 Gene3D G3DSA:3.40.5.20 1 45 4.8E-17 T 14-10-2018 IPR036840 YqbF domain superfamily GYO_0308 3a67590ba67c8539fe9f32b6bb7cd26f 105 SUPERFAMILY SSF160059 1 45 6.41E-14 T 14-10-2018 GYO_3775 49fb183fe26f869381c410ee81241ff6 161 Gene3D G3DSA:2.40.128.20 1 161 3.1E-84 T 14-10-2018 IPR012674 Calycin GYO_3775 49fb183fe26f869381c410ee81241ff6 161 PIRSF PIRSF011561 1 161 1.9E-99 T 14-10-2018 IPR008729 Phenolic acid decarboxylase GO:0016831 GYO_3775 49fb183fe26f869381c410ee81241ff6 161 SUPERFAMILY SSF50814 2 160 4.87E-77 T 14-10-2018 IPR012674 Calycin GYO_3775 49fb183fe26f869381c410ee81241ff6 161 Pfam PF05870 Phenolic acid decarboxylase (PAD) 1 158 3.6E-83 T 14-10-2018 IPR008729 Phenolic acid decarboxylase GO:0016831 GYO_3775 49fb183fe26f869381c410ee81241ff6 161 ProDom PD022010 DECARBOXYLASE ACID PHENOLIC P-COUMARIC LYASE 4.1.1.- PAD PADC FERULATE PROBABLE 1 161 2.0E-91 T 14-10-2018 IPR008729 Phenolic acid decarboxylase GO:0016831 GYO_3475 adc157fb7135b8b2b3202a5b54f3591b 243 Pfam PF00106 short chain dehydrogenase 5 192 3.6E-33 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR GYO_3475 adc157fb7135b8b2b3202a5b54f3591b 243 Gene3D G3DSA:3.40.50.720 2 240 1.3E-43 T 14-10-2018 GYO_3475 adc157fb7135b8b2b3202a5b54f3591b 243 SUPERFAMILY SSF51735 4 230 2.2E-37 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily GYO_3475 adc157fb7135b8b2b3202a5b54f3591b 243 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 121 137 4.0E-14 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR GYO_3475 adc157fb7135b8b2b3202a5b54f3591b 243 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 72 83 4.0E-14 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR GYO_3475 adc157fb7135b8b2b3202a5b54f3591b 243 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 170 187 4.0E-14 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR GYO_3475 adc157fb7135b8b2b3202a5b54f3591b 243 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 3 20 4.0E-14 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR GYO_3475 adc157fb7135b8b2b3202a5b54f3591b 243 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 147 166 4.0E-14 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR GYO_3475 adc157fb7135b8b2b3202a5b54f3591b 243 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 134 162 - T 14-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 GYO_3802 409d14c27220a63285a8ef2ef1ad3ab2 324 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 5 319 2.3E-32 T 14-10-2018 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0016616|GO:0051287|GO:0055114 GYO_3802 409d14c27220a63285a8ef2ef1ad3ab2 324 ProSitePatterns PS00065 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 150 178 - T 14-10-2018 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 GYO_3802 409d14c27220a63285a8ef2ef1ad3ab2 324 Gene3D G3DSA:3.40.50.720 99 290 2.0E-114 T 14-10-2018 GYO_3802 409d14c27220a63285a8ef2ef1ad3ab2 324 ProSitePatterns PS00670 D-isomer specific 2-hydroxyacid dehydrogenases signature 2. 199 221 - T 14-10-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site GYO_3802 409d14c27220a63285a8ef2ef1ad3ab2 324 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 111 289 4.0E-67 T 14-10-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 GYO_3802 409d14c27220a63285a8ef2ef1ad3ab2 324 Gene3D G3DSA:3.40.50.720 5 316 2.0E-114 T 14-10-2018 GYO_3802 409d14c27220a63285a8ef2ef1ad3ab2 324 SUPERFAMILY SSF51735 105 290 1.25E-59 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily GYO_3802 409d14c27220a63285a8ef2ef1ad3ab2 324 SUPERFAMILY SSF52283 1 133 1.49E-30 T 14-10-2018 GYO_3593 dbda0237f37640e7c93a01e47905db21 127 SUPERFAMILY SSF55331 2 126 2.83E-40 T 14-10-2018 IPR014347 Tautomerase/MIF superfamily GYO_3593 dbda0237f37640e7c93a01e47905db21 127 Gene3D G3DSA:3.30.429.10 1 127 1.1E-47 T 14-10-2018 IPR014347 Tautomerase/MIF superfamily GYO_3593 dbda0237f37640e7c93a01e47905db21 127 Pfam PF14552 Tautomerase enzyme 38 119 1.8E-30 T 14-10-2018 IPR037479 Tautomerase, MSAD family GYO_1017 633f8b49693fda2d8690556e989b095b 315 Gene3D G3DSA:3.40.50.1980 36 145 2.6E-28 T 14-10-2018 GYO_1017 633f8b49693fda2d8690556e989b095b 315 Pfam PF01497 Periplasmic binding protein 61 289 2.0E-41 T 14-10-2018 IPR002491 ABC transporter periplasmic binding domain GYO_1017 633f8b49693fda2d8690556e989b095b 315 Gene3D G3DSA:3.40.50.1980 147 314 1.4E-55 T 14-10-2018 GYO_1017 633f8b49693fda2d8690556e989b095b 315 SUPERFAMILY SSF53807 43 310 2.98E-65 T 14-10-2018 GYO_1687 289c8bdac29ae3a65486c83b3606d87c 235 SUPERFAMILY SSF56784 3 226 2.0E-59 T 14-10-2018 IPR036412 HAD-like superfamily GYO_1687 289c8bdac29ae3a65486c83b3606d87c 235 TIGRFAM TIGR03333 salvage_mtnX: 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase 7 220 2.2E-124 T 14-10-2018 IPR017718 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase GO:0016791|GO:0071267 KEGG: 00270+3.1.3.87|MetaCyc: PWY-4361 GYO_1687 289c8bdac29ae3a65486c83b3606d87c 235 Gene3D G3DSA:3.90.1470.20 17 136 6.6E-77 T 14-10-2018 GYO_1687 289c8bdac29ae3a65486c83b3606d87c 235 Gene3D G3DSA:3.40.50.1000 8 212 6.6E-77 T 14-10-2018 IPR023214 HAD superfamily GYO_1687 289c8bdac29ae3a65486c83b3606d87c 235 TIGRFAM TIGR01489 DKMTPPase-SF: 2,3-diketo-5-methylthio-1-phosphopentane phosphatase 5 188 3.3E-74 T 14-10-2018 IPR006384 Pyridoxal phosphate phosphatase-related GO:0016791 GYO_1687 289c8bdac29ae3a65486c83b3606d87c 235 TIGRFAM TIGR01488 HAD-SF-IB: HAD phosphoserine phosphatase-like hydrolase, family IB 7 180 6.6E-46 T 14-10-2018 GYO_1687 289c8bdac29ae3a65486c83b3606d87c 235 Hamap MF_01680 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase [mtnX]. 4 218 51.416 T 14-10-2018 IPR017718 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase GO:0016791|GO:0071267 KEGG: 00270+3.1.3.87|MetaCyc: PWY-4361 GYO_1687 289c8bdac29ae3a65486c83b3606d87c 235 Pfam PF12710 haloacid dehalogenase-like hydrolase 8 179 1.6E-20 T 14-10-2018 GYO_0281 c0aae124dee3807392d4b0e7e3de1946 433 Gene3D G3DSA:1.10.860.10 1 138 8.8E-36 T 14-10-2018 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal GYO_0281 c0aae124dee3807392d4b0e7e3de1946 433 SUPERFAMILY SSF52540 163 416 1.1E-39 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase GYO_0281 c0aae124dee3807392d4b0e7e3de1946 433 Pfam PF03796 DnaB-like helicase C terminal domain 165 423 3.1E-89 T 14-10-2018 IPR007694 DNA helicase, DnaB-like, C-terminal GO:0003678|GO:0005524|GO:0006260 Reactome: R-HSA-2151201 GYO_0281 c0aae124dee3807392d4b0e7e3de1946 433 SUPERFAMILY SSF48024 2 109 4.58E-21 T 14-10-2018 IPR036185 DNA helicase, DnaB-like, N-terminal domain superfamily GO:0003678|GO:0005524|GO:0006260 GYO_0281 c0aae124dee3807392d4b0e7e3de1946 433 Pfam PF00772 DnaB-like helicase N terminal domain 7 100 3.8E-18 T 14-10-2018 IPR007693 DNA helicase, DnaB-like, N-terminal GO:0003678|GO:0005524|GO:0006260 GYO_0281 c0aae124dee3807392d4b0e7e3de1946 433 Gene3D G3DSA:3.40.50.300 143 431 9.4E-99 T 14-10-2018 GYO_0281 c0aae124dee3807392d4b0e7e3de1946 433 TIGRFAM TIGR00665 DnaB: replicative DNA helicase 7 425 6.6E-121 T 14-10-2018 IPR007692 DNA helicase, DnaB type GO:0003677|GO:0003678|GO:0005524|GO:0006260 GYO_0202 c0aae124dee3807392d4b0e7e3de1946 433 Gene3D G3DSA:1.10.860.10 1 138 8.8E-36 T 14-10-2018 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal GYO_0202 c0aae124dee3807392d4b0e7e3de1946 433 SUPERFAMILY SSF52540 163 416 1.1E-39 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase GYO_0202 c0aae124dee3807392d4b0e7e3de1946 433 Pfam PF03796 DnaB-like helicase C terminal domain 165 423 3.1E-89 T 14-10-2018 IPR007694 DNA helicase, DnaB-like, C-terminal GO:0003678|GO:0005524|GO:0006260 Reactome: R-HSA-2151201 GYO_0202 c0aae124dee3807392d4b0e7e3de1946 433 SUPERFAMILY SSF48024 2 109 4.58E-21 T 14-10-2018 IPR036185 DNA helicase, DnaB-like, N-terminal domain superfamily GO:0003678|GO:0005524|GO:0006260 GYO_0202 c0aae124dee3807392d4b0e7e3de1946 433 Pfam PF00772 DnaB-like helicase N terminal domain 7 100 3.8E-18 T 14-10-2018 IPR007693 DNA helicase, DnaB-like, N-terminal GO:0003678|GO:0005524|GO:0006260 GYO_0202 c0aae124dee3807392d4b0e7e3de1946 433 Gene3D G3DSA:3.40.50.300 143 431 9.4E-99 T 14-10-2018 GYO_0202 c0aae124dee3807392d4b0e7e3de1946 433 TIGRFAM TIGR00665 DnaB: replicative DNA helicase 7 425 6.6E-121 T 14-10-2018 IPR007692 DNA helicase, DnaB type GO:0003677|GO:0003678|GO:0005524|GO:0006260 GYO_3809 4d4a30a4443f6629434a5d2b9044b2eb 85 SUPERFAMILY SSF55594 3 84 1.44E-28 T 14-10-2018 IPR035895 HPr-like superfamily GYO_3809 4d4a30a4443f6629434a5d2b9044b2eb 85 ProSitePatterns PS00589 PTS HPR domain serine phosphorylation site signature. 39 54 - T 14-10-2018 IPR002114 Phosphotransferase system, HPr serine phosphorylation site GYO_3809 4d4a30a4443f6629434a5d2b9044b2eb 85 Gene3D G3DSA:3.30.1340.10 1 85 1.1E-37 T 14-10-2018 IPR035895 HPr-like superfamily GYO_3809 4d4a30a4443f6629434a5d2b9044b2eb 85 TIGRFAM TIGR01003 PTS_HPr_family: phosphocarrier, HPr family 1 81 5.0E-32 T 14-10-2018 IPR000032 Phosphocarrier protein HPr-like GYO_3809 4d4a30a4443f6629434a5d2b9044b2eb 85 Pfam PF00381 PTS HPr component phosphorylation site 3 82 6.8E-32 T 14-10-2018 IPR000032 Phosphocarrier protein HPr-like GYO_3809 4d4a30a4443f6629434a5d2b9044b2eb 85 PRINTS PR00107 Phosphocarrier protein signature 38 53 1.6E-21 T 14-10-2018 IPR000032 Phosphocarrier protein HPr-like GYO_3809 4d4a30a4443f6629434a5d2b9044b2eb 85 PRINTS PR00107 Phosphocarrier protein signature 13 29 1.6E-21 T 14-10-2018 IPR000032 Phosphocarrier protein HPr-like GYO_3809 4d4a30a4443f6629434a5d2b9044b2eb 85 PRINTS PR00107 Phosphocarrier protein signature 53 70 1.6E-21 T 14-10-2018 IPR000032 Phosphocarrier protein HPr-like GYO_2569 06325617a3d40e9e7994559230a9616a 143 SUPERFAMILY SSF50891 13 137 1.42E-46 T 14-10-2018 IPR029000 Cyclophilin-like domain superfamily GYO_2569 06325617a3d40e9e7994559230a9616a 143 PIRSF PIRSF001467 7 142 3.4E-39 T 14-10-2018 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase GO:0003755 GYO_2569 06325617a3d40e9e7994559230a9616a 143 Gene3D G3DSA:2.40.100.10 1 143 1.5E-58 T 14-10-2018 IPR029000 Cyclophilin-like domain superfamily GYO_2569 06325617a3d40e9e7994559230a9616a 143 Pfam PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 12 137 6.9E-40 T 14-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 GYO_2569 06325617a3d40e9e7994559230a9616a 143 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 44 56 3.4E-25 T 14-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 GYO_2569 06325617a3d40e9e7994559230a9616a 143 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 112 127 3.4E-25 T 14-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 GYO_2569 06325617a3d40e9e7994559230a9616a 143 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 18 33 3.4E-25 T 14-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 GYO_2569 06325617a3d40e9e7994559230a9616a 143 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 99 111 3.4E-25 T 14-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 GYO_2569 06325617a3d40e9e7994559230a9616a 143 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 84 99 3.4E-25 T 14-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 GYO_2569 06325617a3d40e9e7994559230a9616a 143 ProSitePatterns PS00170 Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 39 56 - T 14-10-2018 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site GO:0003755|GO:0006457 GYO_4103 600e0e7bb016a4e6656f181f3cce1771 500 SUPERFAMILY SSF56024 289 477 8.97E-47 T 14-10-2018 GYO_4103 600e0e7bb016a4e6656f181f3cce1771 500 Pfam PF13396 Phospholipase_D-nuclease N-terminal 42 82 1.3E-6 T 14-10-2018 IPR027379 Cardiolipin synthase N-terminal GYO_4103 600e0e7bb016a4e6656f181f3cce1771 500 SMART SM00155 237 264 3.9E-5 T 14-10-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 GYO_4103 600e0e7bb016a4e6656f181f3cce1771 500 SMART SM00155 413 440 4.0E-8 T 14-10-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 GYO_4103 600e0e7bb016a4e6656f181f3cce1771 500 Hamap MF_01916 Cardiolipin synthase. 34 500 39.695 T 14-10-2018 IPR030874 Cardiolipin synthase, Firmicutes-type GO:0008808|GO:0032049 GYO_4103 600e0e7bb016a4e6656f181f3cce1771 500 TIGRFAM TIGR04265 bac_cardiolipin: cardiolipin synthase 38 500 1.6E-141 T 14-10-2018 IPR022924 Cardiolipin synthase GO:0008808|GO:0016780|GO:0032049 GYO_4103 600e0e7bb016a4e6656f181f3cce1771 500 Pfam PF13091 PLD-like domain 155 297 1.9E-13 T 14-10-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 GYO_4103 600e0e7bb016a4e6656f181f3cce1771 500 Pfam PF13091 PLD-like domain 342 467 2.4E-33 T 14-10-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 GYO_4103 600e0e7bb016a4e6656f181f3cce1771 500 SUPERFAMILY SSF56024 126 331 2.47E-50 T 14-10-2018 GYO_4103 600e0e7bb016a4e6656f181f3cce1771 500 Gene3D G3DSA:3.30.870.10 323 470 1.2E-33 T 14-10-2018 GYO_4103 600e0e7bb016a4e6656f181f3cce1771 500 Gene3D G3DSA:3.30.870.10 131 321 1.7E-42 T 14-10-2018 GYO_1905 fab143b1617d894296c8094311631f3f 210 Pfam PF00156 Phosphoribosyl transferase domain 44 155 3.2E-18 T 14-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 GYO_1905 fab143b1617d894296c8094311631f3f 210 Gene3D G3DSA:3.40.50.2020 1 210 9.3E-61 T 14-10-2018 GYO_1905 fab143b1617d894296c8094311631f3f 210 SUPERFAMILY SSF53271 7 204 3.41E-51 T 14-10-2018 IPR029057 Phosphoribosyltransferase-like GYO_1905 fab143b1617d894296c8094311631f3f 210 Hamap MF_01208 Orotate phosphoribosyltransferase [pyrE]. 1 210 30.177 T 14-10-2018 IPR023031 Orotate phosphoribosyltransferase GO:0004588|GO:0006221 KEGG: 00240+2.4.2.10|KEGG: 00983+2.4.2.10|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 GYO_1905 fab143b1617d894296c8094311631f3f 210 TIGRFAM TIGR00336 pyrE: orotate phosphoribosyltransferase 7 177 5.5E-58 T 14-10-2018 IPR004467 Orotate phosphoribosyl transferase domain GO:0004588 KEGG: 00240+2.4.2.10|KEGG: 00983+2.4.2.10|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 GYO_2807 9ad32705002847803795206dd20ac270 437 Gene3D G3DSA:2.40.50.140 370 437 1.6E-7 T 14-10-2018 GYO_2807 9ad32705002847803795206dd20ac270 437 Gene3D G3DSA:3.90.226.10 25 236 1.8E-44 T 14-10-2018 GYO_2807 9ad32705002847803795206dd20ac270 437 Pfam PF01957 NfeD-like C-terminal, partner-binding 288 436 1.3E-16 T 14-10-2018 IPR002810 NfeD-like, C-terminal domain GYO_2807 9ad32705002847803795206dd20ac270 437 Pfam PF01972 Serine dehydrogenase proteinase 32 125 2.7E-8 T 14-10-2018 IPR002825 Peptidase S49, serine-peptidase prokaryotes GO:0016021 GYO_2807 9ad32705002847803795206dd20ac270 437 SUPERFAMILY SSF141322 377 436 5.62E-5 T 14-10-2018 GYO_2807 9ad32705002847803795206dd20ac270 437 SUPERFAMILY SSF52096 14 191 6.8E-23 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily GYO_3122 233a17dcab6782f18a4473174262f126 500 Pfam PF06964 Alpha-L-arabinofuranosidase C-terminal domain 291 490 1.9E-43 T 14-10-2018 IPR010720 Alpha-L-arabinofuranosidase, C-terminal GO:0046373|GO:0046556 KEGG: 00520+3.2.1.55 GYO_3122 233a17dcab6782f18a4473174262f126 500 Gene3D G3DSA:3.20.20.80 18 381 1.9E-230 T 14-10-2018 GYO_3122 233a17dcab6782f18a4473174262f126 500 Gene3D G3DSA:2.60.40.1180 8 494 1.9E-230 T 14-10-2018 IPR013780 Glycosyl hydrolase, all-beta GYO_3122 233a17dcab6782f18a4473174262f126 500 SUPERFAMILY SSF51011 369 498 6.83E-46 T 14-10-2018 GYO_3122 233a17dcab6782f18a4473174262f126 500 SUPERFAMILY SSF51445 17 381 2.11E-117 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily GYO_3122 233a17dcab6782f18a4473174262f126 500 SMART SM00813 291 490 3.0E-95 T 14-10-2018 IPR010720 Alpha-L-arabinofuranosidase, C-terminal GO:0046373|GO:0046556 KEGG: 00520+3.2.1.55 GYO_3910 bbda0368d39c8ecc03e570fadf463824 461 Gene3D G3DSA:1.20.5.100 199 229 1.3E-19 T 14-10-2018 GYO_3910 bbda0368d39c8ecc03e570fadf463824 461 Pfam PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain 3 184 2.0E-70 T 14-10-2018 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 GYO_3910 bbda0368d39c8ecc03e570fadf463824 461 TIGRFAM TIGR03026 NDP-sugDHase: nucleotide sugar dehydrogenase 2 412 1.3E-141 T 14-10-2018 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 GYO_3910 bbda0368d39c8ecc03e570fadf463824 461 Pfam PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain 315 414 4.7E-29 T 14-10-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 GYO_3910 bbda0368d39c8ecc03e570fadf463824 461 PIRSF PIRSF000124 2 431 1.5E-140 T 14-10-2018 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 GYO_3910 bbda0368d39c8ecc03e570fadf463824 461 PIRSF PIRSF500134 2 434 1.2E-182 T 14-10-2018 IPR028357 UDP-glucose 6-dehydrogenase, bacterial type GO:0000271|GO:0003979 KEGG: 00040+1.1.1.22|KEGG: 00053+1.1.1.22|KEGG: 00520+1.1.1.22|MetaCyc: PWY-7346|MetaCyc: PWY-7820 GYO_3910 bbda0368d39c8ecc03e570fadf463824 461 SUPERFAMILY SSF48179 199 296 2.04E-34 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 GYO_3910 bbda0368d39c8ecc03e570fadf463824 461 Gene3D G3DSA:3.40.50.720 1 198 2.6E-74 T 14-10-2018 GYO_3910 bbda0368d39c8ecc03e570fadf463824 461 SUPERFAMILY SSF51735 2 194 3.7E-51 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily GYO_3910 bbda0368d39c8ecc03e570fadf463824 461 SUPERFAMILY SSF52413 300 426 7.32E-35 T 14-10-2018 IPR036220 UDP-glucose/GDP-mannose dehydrogenase, C-terminal domain superfamily Reactome: R-HSA-173599 GYO_3910 bbda0368d39c8ecc03e570fadf463824 461 Pfam PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain 199 291 2.0E-40 T 14-10-2018 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 GYO_3910 bbda0368d39c8ecc03e570fadf463824 461 Gene3D G3DSA:3.40.50.720 230 442 2.0E-75 T 14-10-2018 GYO_3910 bbda0368d39c8ecc03e570fadf463824 461 SMART SM00984 314 416 2.3E-42 T 14-10-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 GYO_3878 823afbf787296053fa7d30e2bfea0ab0 498 Pfam PF07196 Flagellin hook IN motif 125 185 4.2E-9 T 14-10-2018 IPR010810 Flagellin hook, IN motif GO:0006928|GO:0009288|GO:0044781 GYO_3878 823afbf787296053fa7d30e2bfea0ab0 498 Pfam PF07195 Flagellar hook-associated protein 2 C-terminus 225 487 8.0E-62 T 14-10-2018 IPR010809 Flagellar hook-associated protein 2, C-terminal GO:0007155|GO:0009288 GYO_3878 823afbf787296053fa7d30e2bfea0ab0 498 Pfam PF02465 Flagellar hook-associated protein 2 N-terminus 10 108 2.0E-28 T 14-10-2018 IPR003481 Flagellar hook-associated protein 2, N-terminal GO:0009424 GYO_3123 91d24742a733b00888b9dfda7cf7f21e 281 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 97 272 4.2E-18 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 GYO_3123 91d24742a733b00888b9dfda7cf7f21e 281 Gene3D G3DSA:1.10.3720.10 4 272 3.8E-58 T 14-10-2018 IPR035906 MetI-like superfamily GYO_3123 91d24742a733b00888b9dfda7cf7f21e 281 SUPERFAMILY SSF161098 11 281 6.67E-66 T 14-10-2018 IPR035906 MetI-like superfamily GYO_2274 7a8d4f3d323425e976f62e8abef727b6 170 Pfam PF13302 Acetyltransferase (GNAT) domain 7 141 7.9E-32 T 14-10-2018 IPR000182 GNAT domain GYO_2274 7a8d4f3d323425e976f62e8abef727b6 170 Gene3D G3DSA:3.40.630.30 1 168 4.2E-57 T 14-10-2018 GYO_2274 7a8d4f3d323425e976f62e8abef727b6 170 SUPERFAMILY SSF55729 1 165 2.62E-49 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase GYO_2543 da98fb2dd43f43849fe9690c8fb4186b 589 SUPERFAMILY SSF55785 246 356 1.13E-8 T 14-10-2018 IPR035965 PAS domain superfamily GYO_2543 da98fb2dd43f43849fe9690c8fb4186b 589 SUPERFAMILY SSF158472 195 242 3.92E-10 T 14-10-2018 GYO_2543 da98fb2dd43f43849fe9690c8fb4186b 589 Gene3D G3DSA:1.10.287.130 360 435 8.8E-26 T 14-10-2018 GYO_2543 da98fb2dd43f43849fe9690c8fb4186b 589 Pfam PF00512 His Kinase A (phospho-acceptor) domain 365 431 2.9E-19 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 GYO_2543 da98fb2dd43f43849fe9690c8fb4186b 589 Gene3D G3DSA:1.20.1480.50 155 248 6.7E-18 T 14-10-2018 GYO_2543 da98fb2dd43f43849fe9690c8fb4186b 589 Pfam PF00672 HAMP domain 195 241 2.5E-12 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 GYO_2543 da98fb2dd43f43849fe9690c8fb4186b 589 Pfam PF00989 PAS fold 253 355 6.3E-11 T 14-10-2018 IPR013767 PAS fold GO:0006355 GYO_2543 da98fb2dd43f43849fe9690c8fb4186b 589 Gene3D G3DSA:3.30.450.20 249 359 2.1E-12 T 14-10-2018 GYO_2543 da98fb2dd43f43849fe9690c8fb4186b 589 SMART SM00091 253 320 1.3E-6 T 14-10-2018 IPR000014 PAS domain GYO_2543 da98fb2dd43f43849fe9690c8fb4186b 589 PRINTS PR00344 Bacterial sensor protein C-terminal signature 573 586 3.2E-19 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 GYO_2543 da98fb2dd43f43849fe9690c8fb4186b 589 PRINTS PR00344 Bacterial sensor protein C-terminal signature 514 528 3.2E-19 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 GYO_2543 da98fb2dd43f43849fe9690c8fb4186b 589 PRINTS PR00344 Bacterial sensor protein C-terminal signature 549 567 3.2E-19 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 GYO_2543 da98fb2dd43f43849fe9690c8fb4186b 589 PRINTS PR00344 Bacterial sensor protein C-terminal signature 532 542 3.2E-19 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 GYO_2543 da98fb2dd43f43849fe9690c8fb4186b 589 SUPERFAMILY SSF47384 348 432 3.34E-21 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 GYO_2543 da98fb2dd43f43849fe9690c8fb4186b 589 Gene3D G3DSA:3.30.565.10 436 589 7.1E-49 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily GYO_2543 da98fb2dd43f43849fe9690c8fb4186b 589 SMART SM00387 477 589 2.5E-42 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase GYO_2543 da98fb2dd43f43849fe9690c8fb4186b 589 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 478 587 1.9E-29 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase GYO_2543 da98fb2dd43f43849fe9690c8fb4186b 589 SUPERFAMILY SSF55874 420 587 3.27E-50 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily GYO_2543 da98fb2dd43f43849fe9690c8fb4186b 589 SMART SM00388 364 431 1.5E-21 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 GYO_2543 da98fb2dd43f43849fe9690c8fb4186b 589 SMART SM00304 194 246 2.0E-14 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 GYO_3639 31a3042ec518cad321855dd4bd7f811e 336 SUPERFAMILY SSF81345 5 334 7.72E-86 T 14-10-2018 IPR037294 ABC transporter, BtuC-like GYO_3639 31a3042ec518cad321855dd4bd7f811e 336 Pfam PF01032 FecCD transport family 18 334 1.4E-96 T 14-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 GYO_3639 31a3042ec518cad321855dd4bd7f811e 336 Gene3D G3DSA:1.10.3470.10 4 336 2.8E-100 T 14-10-2018 IPR037294 ABC transporter, BtuC-like GYO_0327 d62de0a2ece8e91f4e915249da8d0994 109 Pfam PF09636 XkdW protein 1 106 6.0E-53 T 14-10-2018 IPR019094 Bacteriophage SP-beta, YorD GYO_0327 d62de0a2ece8e91f4e915249da8d0994 109 Gene3D G3DSA:3.30.56.60 1 60 8.4E-31 T 14-10-2018 IPR035950 XkdW-like superfamily GYO_0327 d62de0a2ece8e91f4e915249da8d0994 109 SUPERFAMILY SSF159865 1 60 1.57E-24 T 14-10-2018 IPR035950 XkdW-like superfamily GYO_0248 d62de0a2ece8e91f4e915249da8d0994 109 Pfam PF09636 XkdW protein 1 106 6.0E-53 T 14-10-2018 IPR019094 Bacteriophage SP-beta, YorD GYO_0248 d62de0a2ece8e91f4e915249da8d0994 109 Gene3D G3DSA:3.30.56.60 1 60 8.4E-31 T 14-10-2018 IPR035950 XkdW-like superfamily GYO_0248 d62de0a2ece8e91f4e915249da8d0994 109 SUPERFAMILY SSF159865 1 60 1.57E-24 T 14-10-2018 IPR035950 XkdW-like superfamily GYO_1610 3d80457c9948e6c68f60f3f49a2599f4 272 Gene3D G3DSA:1.10.3730.10 163 265 6.2E-13 T 14-10-2018 GYO_1610 3d80457c9948e6c68f60f3f49a2599f4 272 SUPERFAMILY SSF48179 159 266 2.55E-15 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 GYO_1610 3d80457c9948e6c68f60f3f49a2599f4 272 SUPERFAMILY SSF51735 4 156 3.16E-18 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily GYO_1610 3d80457c9948e6c68f60f3f49a2599f4 272 Gene3D G3DSA:3.40.50.720 1 162 1.2E-30 T 14-10-2018 GYO_1610 3d80457c9948e6c68f60f3f49a2599f4 272 PIRSF PIRSF000193 1 267 7.6E-76 T 14-10-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 GYO_1610 3d80457c9948e6c68f60f3f49a2599f4 272 Pfam PF14748 Pyrroline-5-carboxylate reductase dimerisation 160 262 3.0E-13 T 14-10-2018 IPR029036 Pyrroline-5-carboxylate reductase, dimerisation domain KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 GYO_1610 3d80457c9948e6c68f60f3f49a2599f4 272 Pfam PF03807 NADP oxidoreductase coenzyme F420-dependent 3 99 4.5E-14 T 14-10-2018 IPR028939 Pyrroline-5-carboxylate reductase, catalytic, N-terminal GYO_0538 c6981ff4967beb1b1a7cbbf5bf6e6530 710 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 19 73 1.7E-11 T 14-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 GYO_0538 c6981ff4967beb1b1a7cbbf5bf6e6530 710 Pfam PF00384 Molybdopterin oxidoreductase 78 503 2.8E-104 T 14-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 GYO_0538 c6981ff4967beb1b1a7cbbf5bf6e6530 710 Pfam PF01568 Molydopterin dinucleotide binding domain 597 704 9.2E-28 T 14-10-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0043546|GO:0055114 GYO_0538 c6981ff4967beb1b1a7cbbf5bf6e6530 710 SUPERFAMILY SSF50692 549 709 6.33E-37 T 14-10-2018 IPR009010 Aspartate decarboxylase-like domain superfamily GYO_0538 c6981ff4967beb1b1a7cbbf5bf6e6530 710 Gene3D G3DSA:3.40.50.740 83 552 7.5E-165 T 14-10-2018 GYO_0538 c6981ff4967beb1b1a7cbbf5bf6e6530 710 Gene3D G3DSA:3.40.228.10 156 355 7.5E-165 T 14-10-2018 GYO_0538 c6981ff4967beb1b1a7cbbf5bf6e6530 710 ProSitePatterns PS00490 Prokaryotic molybdopterin oxidoreductases signature 2. 449 466 - T 14-10-2018 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 GYO_0538 c6981ff4967beb1b1a7cbbf5bf6e6530 710 SMART SM00926 19 75 1.7E-5 T 14-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 GYO_0538 c6981ff4967beb1b1a7cbbf5bf6e6530 710 Gene3D G3DSA:2.40.40.20 594 710 3.3E-37 T 14-10-2018 GYO_0538 c6981ff4967beb1b1a7cbbf5bf6e6530 710 Gene3D G3DSA:2.20.25.90 20 74 3.7E-7 T 14-10-2018 GYO_0538 c6981ff4967beb1b1a7cbbf5bf6e6530 710 SUPERFAMILY SSF53706 19 579 1.18E-173 T 14-10-2018 GYO_0538 c6981ff4967beb1b1a7cbbf5bf6e6530 710 PIRSF PIRSF000144 64 618 3.6E-43 T 14-10-2018 GYO_3097 a46f9028d79008b6775e75d0b4894a3d 104 SUPERFAMILY SSF52833 3 104 6.03E-37 T 14-10-2018 IPR036249 Thioredoxin-like superfamily GYO_3097 a46f9028d79008b6775e75d0b4894a3d 104 PIRSF PIRSF000077 1 104 3.8E-44 T 14-10-2018 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 GYO_3097 a46f9028d79008b6775e75d0b4894a3d 104 Gene3D G3DSA:3.40.30.10 1 104 7.2E-37 T 14-10-2018 GYO_3097 a46f9028d79008b6775e75d0b4894a3d 104 TIGRFAM TIGR01068 thioredoxin: thioredoxin 8 103 7.9E-40 T 14-10-2018 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 GYO_3097 a46f9028d79008b6775e75d0b4894a3d 104 Pfam PF00085 Thioredoxin 3 103 7.5E-31 T 14-10-2018 IPR013766 Thioredoxin domain GO:0045454 GYO_3097 a46f9028d79008b6775e75d0b4894a3d 104 ProSitePatterns PS00194 Thioredoxin family active site. 21 39 - T 14-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 GYO_3097 a46f9028d79008b6775e75d0b4894a3d 104 PRINTS PR00421 Thioredoxin family signature 20 28 1.3E-8 T 14-10-2018 GYO_3097 a46f9028d79008b6775e75d0b4894a3d 104 PRINTS PR00421 Thioredoxin family signature 68 79 1.3E-8 T 14-10-2018 GYO_3097 a46f9028d79008b6775e75d0b4894a3d 104 PRINTS PR00421 Thioredoxin family signature 28 37 1.3E-8 T 14-10-2018 GYO_1929 0fc0065a7065d11b5ed666aace6210c2 298 SUPERFAMILY SSF52540 68 295 2.85E-64 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase GYO_1929 0fc0065a7065d11b5ed666aace6210c2 298 Gene3D G3DSA:3.40.50.300 66 230 1.2E-50 T 14-10-2018 GYO_1929 0fc0065a7065d11b5ed666aace6210c2 298 Pfam PF03193 RsgA GTPase 63 230 6.3E-64 T 14-10-2018 IPR010914 RsgA GTPase domain GO:0003924|GO:0005525 GYO_1929 0fc0065a7065d11b5ed666aace6210c2 298 Pfam PF16745 RsgA N-terminal domain 3 60 2.0E-24 T 14-10-2018 IPR031944 Ribosome biogenesis GTPase RsgA, N-terminal GYO_1929 0fc0065a7065d11b5ed666aace6210c2 298 Hamap MF_01820 Small ribosomal subunit biogenesis GTPase RsgA [rsgA]. 2 295 39.404 T 14-10-2018 IPR004881 Ribosome biogenesis GTPase RsgA GO:0003924|GO:0005525 GYO_1929 0fc0065a7065d11b5ed666aace6210c2 298 Gene3D G3DSA:1.10.40.50 231 298 1.1E-25 T 14-10-2018 GYO_1929 0fc0065a7065d11b5ed666aace6210c2 298 TIGRFAM TIGR00157 TIGR00157: ribosome small subunit-dependent GTPase A 43 289 8.3E-103 T 14-10-2018 IPR004881 Ribosome biogenesis GTPase RsgA GO:0003924|GO:0005525 GYO_1929 0fc0065a7065d11b5ed666aace6210c2 298 Gene3D G3DSA:2.40.50.140 1 65 3.1E-31 T 14-10-2018 GYO_1929 0fc0065a7065d11b5ed666aace6210c2 298 SUPERFAMILY SSF50249 1 66 2.14E-17 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold GYO_2073 2fac983984e8c5e5f744f962dacf659c 5047 Gene3D G3DSA:3.40.47.10 3346 3951 2.2E-263 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 GYO_2073 2fac983984e8c5e5f744f962dacf659c 5047 ProSitePatterns PS00012 Phosphopantetheine attachment site. 4495 4510 - T 14-10-2018 IPR006162 Phosphopantetheine attachment site GYO_2073 2fac983984e8c5e5f744f962dacf659c 5047 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 3506 3522 - T 14-10-2018 IPR018201 Beta-ketoacyl synthase, active site GYO_2073 2fac983984e8c5e5f744f962dacf659c 5047 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 2021 2139 5.7E-39 T 14-10-2018 IPR014031 Beta-ketoacyl synthase, C-terminal GYO_2073 2fac983984e8c5e5f744f962dacf659c 5047 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 4833 4947 1.6E-31 T 14-10-2018 IPR014031 Beta-ketoacyl synthase, C-terminal GYO_2073 2fac983984e8c5e5f744f962dacf659c 5047 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 3601 3727 2.6E-42 T 14-10-2018 IPR014031 Beta-ketoacyl synthase, C-terminal GYO_2073 2fac983984e8c5e5f744f962dacf659c 5047 Gene3D G3DSA:3.30.70.3050 3834 3932 2.2E-263 T 14-10-2018 GYO_2073 2fac983984e8c5e5f744f962dacf659c 5047 ProSitePatterns PS00012 Phosphopantetheine attachment site. 1688 1703 - T 14-10-2018 IPR006162 Phosphopantetheine attachment site GYO_2073 2fac983984e8c5e5f744f962dacf659c 5047 ProSitePatterns PS00012 Phosphopantetheine attachment site. 622 637 - T 14-10-2018 IPR006162 Phosphopantetheine attachment site GYO_2073 2fac983984e8c5e5f744f962dacf659c 5047 Pfam PF00550 Phosphopantetheine attachment site 1666 1729 1.1E-15 T 14-10-2018 IPR009081 Phosphopantetheine binding ACP domain GYO_2073 2fac983984e8c5e5f744f962dacf659c 5047 Pfam PF00550 Phosphopantetheine attachment site 4471 4536 7.2E-13 T 14-10-2018 IPR009081 Phosphopantetheine binding ACP domain GYO_2073 2fac983984e8c5e5f744f962dacf659c 5047 Pfam PF00550 Phosphopantetheine attachment site 3223 3285 4.1E-14 T 14-10-2018 IPR009081 Phosphopantetheine binding ACP domain GYO_2073 2fac983984e8c5e5f744f962dacf659c 5047 Pfam PF00550 Phosphopantetheine attachment site 599 663 1.5E-10 T 14-10-2018 IPR009081 Phosphopantetheine binding ACP domain GYO_2073 2fac983984e8c5e5f744f962dacf659c 5047 Pfam PF00550 Phosphopantetheine attachment site 3123 3187 5.7E-15 T 14-10-2018 IPR009081 Phosphopantetheine binding ACP domain GYO_2073 2fac983984e8c5e5f744f962dacf659c 5047 SUPERFAMILY SSF51735 4174 4404 1.81E-31 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily GYO_2073 2fac983984e8c5e5f744f962dacf659c 5047 Gene3D G3DSA:3.40.50.12780 15 449 6.4E-132 T 14-10-2018 GYO_2073 2fac983984e8c5e5f744f962dacf659c 5047 Gene3D G3DSA:3.40.47.10 4590 5013 4.8E-134 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 GYO_2073 2fac983984e8c5e5f744f962dacf659c 5047 SUPERFAMILY SSF53901 3341 3780 9.2E-92 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 GYO_2073 2fac983984e8c5e5f744f962dacf659c 5047 Gene3D G3DSA:3.10.129.110 2383 2669 1.1E-76 T 14-10-2018 GYO_2073 2fac983984e8c5e5f744f962dacf659c 5047 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 4176 4374 1.2E-39 T 14-10-2018 GYO_2073 2fac983984e8c5e5f744f962dacf659c 5047 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 2853 3039 8.8E-55 T 14-10-2018 GYO_2073 2fac983984e8c5e5f744f962dacf659c 5047 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 1181 1578 7.0E-129 T 14-10-2018 IPR010071 Amino acid adenylation domain GYO_2073 2fac983984e8c5e5f744f962dacf659c 5047 Pfam PF00668 Condensation domain 692 1141 6.6E-129 T 14-10-2018 IPR001242 Condensation domain GYO_2073 2fac983984e8c5e5f744f962dacf659c 5047 Pfam PF13193 AMP-binding enzyme C-terminal domain 1562 1637 1.5E-12 T 14-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain GYO_2073 2fac983984e8c5e5f744f962dacf659c 5047 Gene3D G3DSA:3.30.559.30 873 1126 4.1E-97 T 14-10-2018 GYO_2073 2fac983984e8c5e5f744f962dacf659c 5047 SUPERFAMILY SSF47336 592 666 1.83E-13 T 14-10-2018 IPR036736 ACP-like superfamily GYO_2073 2fac983984e8c5e5f744f962dacf659c 5047 SMART SM01294 3219 3285 2.3E-5 T 14-10-2018 GYO_2073 2fac983984e8c5e5f744f962dacf659c 5047 SMART SM01294 3121 3187 2.7E-5 T 14-10-2018 GYO_2073 2fac983984e8c5e5f744f962dacf659c 5047 SMART SM01294 4470 4536 4.5E-8 T 14-10-2018 GYO_2073 2fac983984e8c5e5f744f962dacf659c 5047 SMART SM01294 597 663 2.0E-6 T 14-10-2018 GYO_2073 2fac983984e8c5e5f744f962dacf659c 5047 Gene3D G3DSA:3.40.50.720 3959 4430 1.9E-136 T 14-10-2018 GYO_2073 2fac983984e8c5e5f744f962dacf659c 5047 SUPERFAMILY SSF56801 20 561 1.44E-99 T 14-10-2018 GYO_2073 2fac983984e8c5e5f744f962dacf659c 5047 Pfam PF14765 Polyketide synthase dehydratase 2377 2662 5.1E-63 T 14-10-2018 IPR020807 Polyketide synthase, dehydratase domain Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 GYO_2073 2fac983984e8c5e5f744f962dacf659c 5047 SUPERFAMILY SSF51735 2847 3087 1.41E-36 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily GYO_2073 2fac983984e8c5e5f744f962dacf659c 5047 ProSitePatterns PS00455 Putative AMP-binding domain signature. 192 203 - T 14-10-2018 IPR020845 AMP-binding, conserved site GYO_2073 2fac983984e8c5e5f744f962dacf659c 5047 Gene3D G3DSA:1.10.1200.10 3212 3293 6.8E-19 T 14-10-2018 IPR036736 ACP-like superfamily GYO_2073 2fac983984e8c5e5f744f962dacf659c 5047 SUPERFAMILY SSF53901 1762 2188 1.18E-73 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 GYO_2073 2fac983984e8c5e5f744f962dacf659c 5047 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 4738 4754 - T 14-10-2018 IPR018201 Beta-ketoacyl synthase, active site GYO_2073 2fac983984e8c5e5f744f962dacf659c 5047 Gene3D G3DSA:3.30.300.30 451 559 4.0E-34 T 14-10-2018 GYO_2073 2fac983984e8c5e5f744f962dacf659c 5047 SUPERFAMILY SSF47336 1661 1778 4.58E-17 T 14-10-2018 IPR036736 ACP-like superfamily GYO_2073 2fac983984e8c5e5f744f962dacf659c 5047 Gene3D G3DSA:3.30.70.3290 2194 2348 6.0E-53 T 14-10-2018 GYO_2073 2fac983984e8c5e5f744f962dacf659c 5047 SUPERFAMILY SSF52777 696 869 4.22E-30 T 14-10-2018 GYO_2073 2fac983984e8c5e5f744f962dacf659c 5047 Gene3D G3DSA:1.10.1200.10 578 671 5.2E-16 T 14-10-2018 IPR036736 ACP-like superfamily GYO_2073 2fac983984e8c5e5f744f962dacf659c 5047 Gene3D G3DSA:3.30.559.10 695 1070 4.1E-97 T 14-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 GYO_2073 2fac983984e8c5e5f744f962dacf659c 5047 ProSitePatterns PS00455 Putative AMP-binding domain signature. 1304 1315 - T 14-10-2018 IPR020845 AMP-binding, conserved site GYO_2073 2fac983984e8c5e5f744f962dacf659c 5047 Pfam PF08659 KR domain 2853 3038 4.7E-58 T 14-10-2018 IPR013968 Polyketide synthase, ketoreductase domain Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 GYO_2073 2fac983984e8c5e5f744f962dacf659c 5047 Pfam PF08659 KR domain 4179 4373 5.0E-42 T 14-10-2018 IPR013968 Polyketide synthase, ketoreductase domain Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 GYO_2073 2fac983984e8c5e5f744f962dacf659c 5047 Gene3D G3DSA:3.40.50.720 2670 3095 1.3E-167 T 14-10-2018 GYO_2073 2fac983984e8c5e5f744f962dacf659c 5047 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 3344 3593 1.5E-90 T 14-10-2018 IPR014030 Beta-ketoacyl synthase, N-terminal GYO_2073 2fac983984e8c5e5f744f962dacf659c 5047 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 1764 2013 8.9E-65 T 14-10-2018 IPR014030 Beta-ketoacyl synthase, N-terminal GYO_2073 2fac983984e8c5e5f744f962dacf659c 5047 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 4593 4825 1.5E-66 T 14-10-2018 IPR014030 Beta-ketoacyl synthase, N-terminal GYO_2073 2fac983984e8c5e5f744f962dacf659c 5047 SUPERFAMILY SSF52777 875 1147 3.11E-46 T 14-10-2018 GYO_2073 2fac983984e8c5e5f744f962dacf659c 5047 SUPERFAMILY SSF53901 4591 4941 5.01E-70 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 GYO_2073 2fac983984e8c5e5f744f962dacf659c 5047 SMART SM00826 2377 2543 5.3E-25 T 14-10-2018 IPR020807 Polyketide synthase, dehydratase domain Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 GYO_2073 2fac983984e8c5e5f744f962dacf659c 5047 Gene3D G3DSA:3.40.47.10 1760 2191 3.3E-147 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 GYO_2073 2fac983984e8c5e5f744f962dacf659c 5047 Gene3D G3DSA:1.10.1200.10 4458 4540 1.2E-18 T 14-10-2018 IPR036736 ACP-like superfamily GYO_2073 2fac983984e8c5e5f744f962dacf659c 5047 Gene3D G3DSA:1.10.1200.10 3107 3189 2.7E-17 T 14-10-2018 IPR036736 ACP-like superfamily GYO_2073 2fac983984e8c5e5f744f962dacf659c 5047 Pfam PF00501 AMP-binding enzyme 1160 1554 3.1E-108 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 GYO_2073 2fac983984e8c5e5f744f962dacf659c 5047 Pfam PF00501 AMP-binding enzyme 48 456 6.7E-65 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 GYO_2073 2fac983984e8c5e5f744f962dacf659c 5047 SUPERFAMILY SSF47336 3217 3359 1.83E-13 T 14-10-2018 IPR036736 ACP-like superfamily GYO_2073 2fac983984e8c5e5f744f962dacf659c 5047 Pfam PF16197 Ketoacyl-synthetase C-terminal extension 3731 3847 1.9E-12 T 14-10-2018 IPR032821 Ketoacyl-synthetase, C-terminal extension Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 GYO_2073 2fac983984e8c5e5f744f962dacf659c 5047 Pfam PF16197 Ketoacyl-synthetase C-terminal extension 2142 2253 2.9E-10 T 14-10-2018 IPR032821 Ketoacyl-synthetase, C-terminal extension Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 GYO_2073 2fac983984e8c5e5f744f962dacf659c 5047 SMART SM00823 Phosphopantetheine attachment site 1664 1733 5.7E-4 T 14-10-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 GYO_2073 2fac983984e8c5e5f744f962dacf659c 5047 SMART SM00823 Phosphopantetheine attachment site 4469 4540 7.0E-7 T 14-10-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 GYO_2073 2fac983984e8c5e5f744f962dacf659c 5047 SMART SM00823 Phosphopantetheine attachment site 3218 3289 2.2E-10 T 14-10-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 GYO_2073 2fac983984e8c5e5f744f962dacf659c 5047 SMART SM00823 Phosphopantetheine attachment site 596 667 1.4E-4 T 14-10-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 GYO_2073 2fac983984e8c5e5f744f962dacf659c 5047 SMART SM00823 Phosphopantetheine attachment site 3120 3191 1.2E-9 T 14-10-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 GYO_2073 2fac983984e8c5e5f744f962dacf659c 5047 SUPERFAMILY SSF56801 1121 1676 3.53E-155 T 14-10-2018 GYO_2073 2fac983984e8c5e5f744f962dacf659c 5047 Gene3D G3DSA:1.10.1200.10 1656 1736 7.5E-18 T 14-10-2018 IPR036736 ACP-like superfamily GYO_2073 2fac983984e8c5e5f744f962dacf659c 5047 SMART SM00825 Beta-ketoacyl synthase 4595 4999 3.2E-109 T 14-10-2018 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain GYO_2073 2fac983984e8c5e5f744f962dacf659c 5047 SMART SM00825 Beta-ketoacyl synthase 1766 2192 4.6E-140 T 14-10-2018 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain GYO_2073 2fac983984e8c5e5f744f962dacf659c 5047 SMART SM00825 Beta-ketoacyl synthase 3346 3786 7.5E-201 T 14-10-2018 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain GYO_2073 2fac983984e8c5e5f744f962dacf659c 5047 SUPERFAMILY SSF51735 3977 4156 3.54E-11 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily GYO_2073 2fac983984e8c5e5f744f962dacf659c 5047 SUPERFAMILY SSF47336 3118 3194 2.09E-13 T 14-10-2018 IPR036736 ACP-like superfamily GYO_2073 2fac983984e8c5e5f744f962dacf659c 5047 SUPERFAMILY SSF47336 4466 4607 1.2E-14 T 14-10-2018 IPR036736 ACP-like superfamily GYO_2073 2fac983984e8c5e5f744f962dacf659c 5047 Gene3D G3DSA:3.30.300.30 1548 1655 5.8E-34 T 14-10-2018 GYO_2073 2fac983984e8c5e5f744f962dacf659c 5047 Gene3D G3DSA:3.40.50.12780 1153 1547 1.4E-133 T 14-10-2018 GYO_2604 1cd0bf2207afc042a84f7cdcccc402e1 214 SUPERFAMILY SSF47413 7 70 4.79E-13 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 GYO_2604 1cd0bf2207afc042a84f7cdcccc402e1 214 SMART SM00530 12 67 9.0E-13 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 GYO_2604 1cd0bf2207afc042a84f7cdcccc402e1 214 Gene3D G3DSA:1.10.260.40 1 82 6.8E-14 T 14-10-2018 GYO_2604 1cd0bf2207afc042a84f7cdcccc402e1 214 Pfam PF06803 Protein of unknown function (DUF1232) 171 203 7.7E-12 T 14-10-2018 IPR010652 Domain of unknown function DUF1232 MetaCyc: PWY-7511 GYO_2604 1cd0bf2207afc042a84f7cdcccc402e1 214 Pfam PF01381 Helix-turn-helix 13 67 1.1E-11 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 GYO_1020 03b961081e9939ffd385256e01b8af66 420 SUPERFAMILY SSF51126 23 419 1.4E-90 T 14-10-2018 IPR011050 Pectin lyase fold/virulence factor GYO_1020 03b961081e9939ffd385256e01b8af66 420 Pfam PF00544 Pectate lyase 130 345 1.1E-48 T 14-10-2018 IPR002022 Pectate lyase GYO_1020 03b961081e9939ffd385256e01b8af66 420 SMART SM00656 105 352 1.8E-46 T 14-10-2018 IPR002022 Pectate lyase GYO_1020 03b961081e9939ffd385256e01b8af66 420 Gene3D G3DSA:2.160.20.10 22 420 2.6E-187 T 14-10-2018 IPR012334 Pectin lyase fold GYO_2218 431efed6587da8ff7a98ca4f2b632b01 371 Hamap MF_00456 Glutamate 5-kinase [proB]. 8 262 37.511 T 14-10-2018 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 GYO_2218 431efed6587da8ff7a98ca4f2b632b01 371 PIRSF PIRSF000729 3 370 2.3E-142 T 14-10-2018 IPR011529 Glutamate 5-kinase GO:0004349|GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922 GYO_2218 431efed6587da8ff7a98ca4f2b632b01 371 Pfam PF00696 Amino acid kinase family 8 234 1.2E-44 T 14-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 GYO_2218 431efed6587da8ff7a98ca4f2b632b01 371 ProSitePatterns PS00902 Glutamate 5-kinase signature. 210 227 - T 14-10-2018 IPR019797 Glutamate 5-kinase, conserved site GO:0004349|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 GYO_2218 431efed6587da8ff7a98ca4f2b632b01 371 SUPERFAMILY SSF88697 281 340 1.04E-11 T 14-10-2018 IPR015947 PUA-like superfamily GYO_2218 431efed6587da8ff7a98ca4f2b632b01 371 PRINTS PR00474 Glutamate 5-kinase family signature 79 107 7.2E-53 T 14-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 GYO_2218 431efed6587da8ff7a98ca4f2b632b01 371 PRINTS PR00474 Glutamate 5-kinase family signature 45 59 7.2E-53 T 14-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 GYO_2218 431efed6587da8ff7a98ca4f2b632b01 371 PRINTS PR00474 Glutamate 5-kinase family signature 119 140 7.2E-53 T 14-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 GYO_2218 431efed6587da8ff7a98ca4f2b632b01 371 PRINTS PR00474 Glutamate 5-kinase family signature 212 232 7.2E-53 T 14-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 GYO_2218 431efed6587da8ff7a98ca4f2b632b01 371 PRINTS PR00474 Glutamate 5-kinase family signature 151 178 7.2E-53 T 14-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 GYO_2218 431efed6587da8ff7a98ca4f2b632b01 371 SMART SM00359 281 362 1.2E-15 T 14-10-2018 IPR002478 PUA domain GO:0003723 GYO_2218 431efed6587da8ff7a98ca4f2b632b01 371 TIGRFAM TIGR01027 proB: glutamate 5-kinase 8 365 4.0E-119 T 14-10-2018 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 GYO_2218 431efed6587da8ff7a98ca4f2b632b01 371 Pfam PF01472 PUA domain 281 352 7.2E-13 T 14-10-2018 IPR002478 PUA domain GO:0003723 GYO_2218 431efed6587da8ff7a98ca4f2b632b01 371 Gene3D G3DSA:2.30.130.10 270 366 1.8E-15 T 14-10-2018 IPR036974 PUA domain superfamily GO:0003723 GYO_2218 431efed6587da8ff7a98ca4f2b632b01 371 SUPERFAMILY SSF53633 8 258 1.83E-66 T 14-10-2018 IPR036393 Acetylglutamate kinase-like superfamily GYO_2218 431efed6587da8ff7a98ca4f2b632b01 371 Gene3D G3DSA:3.40.1160.10 4 263 1.6E-84 T 14-10-2018 IPR036393 Acetylglutamate kinase-like superfamily GYO_0871 295951d4c6171c7c0b7e09ae7ea49522 377 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 93 107 - T 14-10-2018 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 GYO_0871 295951d4c6171c7c0b7e09ae7ea49522 377 SUPERFAMILY SSF50129 32 204 1.83E-61 T 14-10-2018 IPR011032 GroES-like superfamily GYO_0871 295951d4c6171c7c0b7e09ae7ea49522 377 SMART SM00829 39 373 1.4E-5 T 14-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 GYO_0871 295951d4c6171c7c0b7e09ae7ea49522 377 SUPERFAMILY SSF51735 171 339 6.26E-46 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily GYO_0871 295951d4c6171c7c0b7e09ae7ea49522 377 Gene3D G3DSA:3.40.50.720 184 321 3.2E-123 T 14-10-2018 GYO_0871 295951d4c6171c7c0b7e09ae7ea49522 377 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 57 165 1.3E-34 T 14-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 GYO_0871 295951d4c6171c7c0b7e09ae7ea49522 377 Gene3D G3DSA:3.90.180.10 42 360 3.2E-123 T 14-10-2018 GYO_0871 295951d4c6171c7c0b7e09ae7ea49522 377 Pfam PF00107 Zinc-binding dehydrogenase 207 335 2.1E-35 T 14-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 GYO_0439 5618c1855ea679c42450f4c22dba0cb8 296 SUPERFAMILY SSF82282 1 293 8.37E-83 T 14-10-2018 IPR036589 Homocysteine-binding domain superfamily Reactome: R-HSA-1614635 GYO_0439 5618c1855ea679c42450f4c22dba0cb8 296 PIRSF PIRSF037505 2 185 8.0E-4 T 14-10-2018 IPR017226 Betaine-homocysteine S-methyltransferase, BHMT GO:0005737|GO:0008270|GO:0009086|GO:0047150 Reactome: R-HSA-1614635 GYO_0439 5618c1855ea679c42450f4c22dba0cb8 296 PIRSF PIRSF037505 248 293 1.6 T 14-10-2018 IPR017226 Betaine-homocysteine S-methyltransferase, BHMT GO:0005737|GO:0008270|GO:0009086|GO:0047150 Reactome: R-HSA-1614635 GYO_0439 5618c1855ea679c42450f4c22dba0cb8 296 Pfam PF02574 Homocysteine S-methyltransferase 1 288 1.8E-79 T 14-10-2018 IPR003726 Homocysteine-binding domain Reactome: R-HSA-1614635 GYO_0439 5618c1855ea679c42450f4c22dba0cb8 296 Gene3D G3DSA:3.20.20.330 1 289 1.1E-108 T 14-10-2018 IPR036589 Homocysteine-binding domain superfamily Reactome: R-HSA-1614635 GYO_0212 005d78d477eb2e47fe97cd495750aac7 81 Pfam PF04173 TQO small subunit DoxD 8 80 1.7E-6 T 14-10-2018 IPR007301 TQO small subunit DoxD KEGG: 00920+1.8.5.2|MetaCyc: PWY-5303 GYO_0291 005d78d477eb2e47fe97cd495750aac7 81 Pfam PF04173 TQO small subunit DoxD 8 80 1.7E-6 T 14-10-2018 IPR007301 TQO small subunit DoxD KEGG: 00920+1.8.5.2|MetaCyc: PWY-5303 GYO_2995 29b082b7ef8fe07961ea3216f7051be7 592 SUPERFAMILY SSF50249 4 108 1.24E-32 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold GYO_2995 29b082b7ef8fe07961ea3216f7051be7 592 Pfam PF01336 OB-fold nucleic acid binding domain 20 105 5.2E-17 T 14-10-2018 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 GYO_2995 29b082b7ef8fe07961ea3216f7051be7 592 Hamap MF_00044 Aspartate--tRNA(Asp/Asn) ligase [aspS]. 3 587 34.799 T 14-10-2018 IPR004524 Aspartate-tRNA ligase, type 1 GO:0005524|GO:0016874 Reactome: R-HSA-379726 GYO_2995 29b082b7ef8fe07961ea3216f7051be7 592 SUPERFAMILY SSF55681 118 587 3.25E-108 T 14-10-2018 GYO_2995 29b082b7ef8fe07961ea3216f7051be7 592 Gene3D G3DSA:3.30.930.10 122 584 2.3E-197 T 14-10-2018 GYO_2995 29b082b7ef8fe07961ea3216f7051be7 592 Gene3D G3DSA:2.40.50.140 1 109 3.4E-33 T 14-10-2018 GYO_2995 29b082b7ef8fe07961ea3216f7051be7 592 TIGRFAM TIGR00459 aspS_bact: aspartate--tRNA ligase 2 588 8.6E-278 T 14-10-2018 IPR004524 Aspartate-tRNA ligase, type 1 GO:0005524|GO:0016874 Reactome: R-HSA-379726 GYO_2995 29b082b7ef8fe07961ea3216f7051be7 592 Gene3D G3DSA:3.30.1360.30 278 422 2.3E-197 T 14-10-2018 IPR004115 GAD-like domain superfamily GO:0004812|GO:0005524|GO:0005737 Reactome: R-HSA-379726 GYO_2995 29b082b7ef8fe07961ea3216f7051be7 592 Pfam PF00152 tRNA synthetases class II (D, K and N) 123 560 2.2E-111 T 14-10-2018 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 GYO_2995 29b082b7ef8fe07961ea3216f7051be7 592 SUPERFAMILY SSF55261 295 422 2.13E-44 T 14-10-2018 IPR004115 GAD-like domain superfamily GO:0004812|GO:0005524|GO:0005737 Reactome: R-HSA-379726 GYO_2995 29b082b7ef8fe07961ea3216f7051be7 592 Pfam PF02938 GAD domain 314 407 2.8E-33 T 14-10-2018 IPR029351 GAD domain Reactome: R-HSA-379726 GYO_2995 29b082b7ef8fe07961ea3216f7051be7 592 PRINTS PR01042 Aspartyl-tRNA synthetase signature 521 535 3.4E-27 T 14-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 GYO_2995 29b082b7ef8fe07961ea3216f7051be7 592 PRINTS PR01042 Aspartyl-tRNA synthetase signature 477 493 3.4E-27 T 14-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 GYO_2995 29b082b7ef8fe07961ea3216f7051be7 592 PRINTS PR01042 Aspartyl-tRNA synthetase signature 213 226 3.4E-27 T 14-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 GYO_2995 29b082b7ef8fe07961ea3216f7051be7 592 PRINTS PR01042 Aspartyl-tRNA synthetase signature 196 208 3.4E-27 T 14-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 GYO_3700 68e09b238a14543b33a5dd389cbbae0f 381 Gene3D G3DSA:3.10.580.10 248 373 3.6E-35 T 14-10-2018 GYO_3700 68e09b238a14543b33a5dd389cbbae0f 381 Pfam PF00005 ABC transporter 18 163 2.0E-34 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 GYO_3700 68e09b238a14543b33a5dd389cbbae0f 381 SMART SM00382 27 221 1.3E-21 T 14-10-2018 IPR003593 AAA+ ATPase domain GYO_3700 68e09b238a14543b33a5dd389cbbae0f 381 ProSitePatterns PS00211 ABC transporters family signature. 136 150 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 GYO_3700 68e09b238a14543b33a5dd389cbbae0f 381 TIGRFAM TIGR01186 proV: glycine betaine/L-proline transport ATP binding subunit 12 372 6.2E-186 T 14-10-2018 IPR005892 Glycine betaine transport ATP-binding subunit GO:0005524|GO:0016020|GO:0031460 GYO_3700 68e09b238a14543b33a5dd389cbbae0f 381 Pfam PF00571 CBS domain 312 364 7.4E-8 T 14-10-2018 IPR000644 CBS domain GYO_3700 68e09b238a14543b33a5dd389cbbae0f 381 Pfam PF00571 CBS domain 252 298 8.5E-10 T 14-10-2018 IPR000644 CBS domain GYO_3700 68e09b238a14543b33a5dd389cbbae0f 381 Gene3D G3DSA:3.40.50.300 1 240 1.2E-76 T 14-10-2018 GYO_3700 68e09b238a14543b33a5dd389cbbae0f 381 SUPERFAMILY SSF54631 251 375 5.31E-25 T 14-10-2018 GYO_3700 68e09b238a14543b33a5dd389cbbae0f 381 SUPERFAMILY SSF52540 1 240 4.89E-79 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase GYO_3700 68e09b238a14543b33a5dd389cbbae0f 381 SMART SM00116 259 307 5.5E-10 T 14-10-2018 IPR000644 CBS domain GYO_3700 68e09b238a14543b33a5dd389cbbae0f 381 SMART SM00116 319 367 7.8E-9 T 14-10-2018 IPR000644 CBS domain GYO_1463 1835d90314f2561956f0da9844913021 190 Pfam PF01928 CYTH domain 4 183 2.6E-34 T 14-10-2018 IPR023577 CYTH domain Reactome: R-HSA-196819 GYO_1463 1835d90314f2561956f0da9844913021 190 SUPERFAMILY SSF55154 5 186 4.74E-30 T 14-10-2018 IPR033469 CYTH-like domain superfamily Reactome: R-HSA-196819 GYO_1463 1835d90314f2561956f0da9844913021 190 Gene3D G3DSA:2.40.320.10 1 189 1.4E-51 T 14-10-2018 GYO_1463 1835d90314f2561956f0da9844913021 190 SMART SM01118 4 189 5.1E-20 T 14-10-2018 IPR023577 CYTH domain Reactome: R-HSA-196819 GYO_1463 1835d90314f2561956f0da9844913021 190 PIRSF PIRSF012526 1 190 2.4E-73 T 14-10-2018 IPR009195 Uncharacterised protein family YjbK GYO_1769 9ffd0f8928121cfb69fad4862dd5aa96 604 Pfam PF00664 ABC transporter transmembrane region 47 313 3.0E-47 T 14-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 GYO_1769 9ffd0f8928121cfb69fad4862dd5aa96 604 Gene3D G3DSA:3.40.50.300 359 604 1.3E-89 T 14-10-2018 GYO_1769 9ffd0f8928121cfb69fad4862dd5aa96 604 SUPERFAMILY SSF52540 352 598 1.01E-88 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase GYO_1769 9ffd0f8928121cfb69fad4862dd5aa96 604 Gene3D G3DSA:1.20.1560.10 17 349 3.4E-94 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 GYO_1769 9ffd0f8928121cfb69fad4862dd5aa96 604 Pfam PF00005 ABC transporter 379 528 7.0E-32 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 GYO_1769 9ffd0f8928121cfb69fad4862dd5aa96 604 ProSitePatterns PS00211 ABC transporters family signature. 500 514 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 GYO_1769 9ffd0f8928121cfb69fad4862dd5aa96 604 SMART SM00382 388 574 1.6E-14 T 14-10-2018 IPR003593 AAA+ ATPase domain GYO_1769 9ffd0f8928121cfb69fad4862dd5aa96 604 SUPERFAMILY SSF90123 32 351 1.12E-79 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 GYO_0417 467d0a6969255eeb0e8a491eadcbc089 152 SUPERFAMILY SSF53955 5 152 3.37E-30 T 14-10-2018 IPR023346 Lysozyme-like domain superfamily GYO_0417 467d0a6969255eeb0e8a491eadcbc089 152 Gene3D G3DSA:1.10.530.70 3 152 2.0E-20 T 14-10-2018 GYO_2045 45294ed5c07c8c5fa6ad343790d907c2 288 Gene3D G3DSA:1.10.260.40 1 87 2.3E-22 T 14-10-2018 GYO_2045 45294ed5c07c8c5fa6ad343790d907c2 288 Pfam PF13413 Helix-turn-helix domain 1 51 2.3E-17 T 14-10-2018 GYO_2045 45294ed5c07c8c5fa6ad343790d907c2 288 Pfam PF13464 Domain of unknown function (DUF4115) 203 264 5.8E-12 T 14-10-2018 IPR025194 Domain of unknown function DUF4115 GYO_1998 d5a946565a276fb07a30db21b677161c 671 Gene3D G3DSA:2.40.50.180 562 625 1.6E-39 T 14-10-2018 GYO_1998 d5a946565a276fb07a30db21b677161c 671 SUPERFAMILY SSF47384 292 352 2.47E-15 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 GYO_1998 d5a946565a276fb07a30db21b677161c 671 Gene3D G3DSA:2.30.30.40 539 665 1.6E-39 T 14-10-2018 GYO_1998 d5a946565a276fb07a30db21b677161c 671 Pfam PF07194 P2 response regulator binding domain 166 244 2.3E-27 T 14-10-2018 IPR010808 Chemotaxis protein CheA, P2 response regulator-binding GO:0000155|GO:0000160|GO:0004673|GO:0006928 GYO_1998 d5a946565a276fb07a30db21b677161c 671 PRINTS PR00344 Bacterial sensor protein C-terminal signature 499 517 3.0E-15 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 GYO_1998 d5a946565a276fb07a30db21b677161c 671 PRINTS PR00344 Bacterial sensor protein C-terminal signature 523 536 3.0E-15 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 GYO_1998 d5a946565a276fb07a30db21b677161c 671 PRINTS PR00344 Bacterial sensor protein C-terminal signature 483 493 3.0E-15 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 GYO_1998 d5a946565a276fb07a30db21b677161c 671 PRINTS PR00344 Bacterial sensor protein C-terminal signature 441 455 3.0E-15 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 GYO_1998 d5a946565a276fb07a30db21b677161c 671 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 399 538 3.1E-15 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase GYO_1998 d5a946565a276fb07a30db21b677161c 671 Gene3D G3DSA:1.10.287.560 291 351 3.8E-20 T 14-10-2018 IPR037006 Histidine kinase CheA-like, homodimeric domain superfamily GO:0000155|GO:0006935 GYO_1998 d5a946565a276fb07a30db21b677161c 671 Pfam PF01584 CheW-like domain 544 670 9.1E-27 T 14-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 GYO_1998 d5a946565a276fb07a30db21b677161c 671 Gene3D G3DSA:3.30.565.10 352 538 1.1E-60 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily GYO_1998 d5a946565a276fb07a30db21b677161c 671 SMART SM00260 531 670 6.4E-47 T 14-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 GYO_1998 d5a946565a276fb07a30db21b677161c 671 Gene3D G3DSA:3.30.70.1110 162 245 2.3E-29 T 14-10-2018 IPR037052 Chemotaxis protein CheA, P2 response regulator-binding domain superfamily GYO_1998 d5a946565a276fb07a30db21b677161c 671 SMART SM01231 291 351 1.5E-19 T 14-10-2018 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 GYO_1998 d5a946565a276fb07a30db21b677161c 671 SUPERFAMILY SSF50341 538 670 1.22E-32 T 14-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 GYO_1998 d5a946565a276fb07a30db21b677161c 671 SUPERFAMILY SSF55052 162 244 3.66E-26 T 14-10-2018 IPR035891 CheY-binding domain of CheA GYO_1998 d5a946565a276fb07a30db21b677161c 671 Pfam PF01627 Hpt domain 5 102 2.9E-20 T 14-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 GYO_1998 d5a946565a276fb07a30db21b677161c 671 Pfam PF02895 Signal transducing histidine kinase, homodimeric domain 291 350 2.7E-14 T 14-10-2018 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 GYO_1998 d5a946565a276fb07a30db21b677161c 671 Gene3D G3DSA:1.20.120.160 1 143 2.1E-39 T 14-10-2018 IPR036641 HPT domain superfamily GO:0000160 GYO_1998 d5a946565a276fb07a30db21b677161c 671 SMART SM00387 396 539 1.4E-24 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase GYO_1998 d5a946565a276fb07a30db21b677161c 671 SMART SM00073 3 100 2.5E-41 T 14-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 GYO_1998 d5a946565a276fb07a30db21b677161c 671 SUPERFAMILY SSF47226 2 112 5.89E-33 T 14-10-2018 IPR036641 HPT domain superfamily GO:0000160 GYO_1998 d5a946565a276fb07a30db21b677161c 671 SUPERFAMILY SSF55874 353 537 1.83E-41 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily GYO_4375 43107333a43f172d964fe312e768664f 278 Pfam PF01261 Xylose isomerase-like TIM barrel 20 225 1.3E-32 T 14-10-2018 IPR013022 Xylose isomerase-like, TIM barrel domain GYO_4375 43107333a43f172d964fe312e768664f 278 Gene3D G3DSA:3.20.20.150 1 278 3.7E-81 T 14-10-2018 GYO_4375 43107333a43f172d964fe312e768664f 278 SUPERFAMILY SSF51658 5 275 7.07E-70 T 14-10-2018 IPR036237 Xylose isomerase-like superfamily GYO_1349 0bd85fccfd05bff865da44e877606a4f 66 Pfam PF11755 Protein of unknown function (DUF3311) 6 65 7.0E-22 T 14-10-2018 IPR021741 Protein of unknown function DUF3311 GYO_3085 49d74058fc508c9333b1f19ac7b506f5 271 Gene3D G3DSA:3.40.50.1860 4 242 7.8E-99 T 14-10-2018 GYO_3085 49d74058fc508c9333b1f19ac7b506f5 271 Hamap MF_00258 Glutamate racemase [murI]. 3 256 41.398 T 14-10-2018 IPR004391 Glutamate racemase GO:0008881|GO:0009252 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 GYO_3085 49d74058fc508c9333b1f19ac7b506f5 271 SUPERFAMILY SSF53681 4 107 4.9E-36 T 14-10-2018 IPR001920 Asp/Glu racemase GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 GYO_3085 49d74058fc508c9333b1f19ac7b506f5 271 Gene3D G3DSA:3.40.50.1860 95 207 7.8E-99 T 14-10-2018 GYO_3085 49d74058fc508c9333b1f19ac7b506f5 271 TIGRFAM TIGR00067 glut_race: glutamate racemase 5 254 6.9E-109 T 14-10-2018 IPR004391 Glutamate racemase GO:0008881|GO:0009252 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 GYO_3085 49d74058fc508c9333b1f19ac7b506f5 271 ProSitePatterns PS00924 Aspartate and glutamate racemases signature 2. 180 190 - T 14-10-2018 IPR033134 Asp/Glu racemase, active site 2 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 GYO_3085 49d74058fc508c9333b1f19ac7b506f5 271 ProSitePatterns PS00923 Aspartate and glutamate racemases signature 1. 70 78 - T 14-10-2018 IPR018187 Asp/Glu racemase, active site 1 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 GYO_3085 49d74058fc508c9333b1f19ac7b506f5 271 Pfam PF01177 Asp/Glu/Hydantoin racemase 5 215 4.7E-38 T 14-10-2018 IPR015942 Asp/Glu/hydantoin racemase GO:0006807|GO:0036361 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 GYO_3085 49d74058fc508c9333b1f19ac7b506f5 271 SUPERFAMILY SSF53681 109 263 7.46E-38 T 14-10-2018 IPR001920 Asp/Glu racemase GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 GYO_3613 89779bced83929de53ed21be7ef72b6c 373 Pfam PF05504 Spore germination B3/ GerAC like, C-terminal 201 367 2.9E-29 T 14-10-2018 IPR008844 Spore germination GerAC GO:0009847|GO:0016020 GYO_3613 89779bced83929de53ed21be7ef72b6c 373 TIGRFAM TIGR02887 spore_ger_x_C: germination protein, Ger(x)C family 1 369 7.9E-93 T 14-10-2018 IPR008844 Spore germination GerAC GO:0009847|GO:0016020 GYO_3613 89779bced83929de53ed21be7ef72b6c 373 Gene3D G3DSA:3.30.300.210 218 371 2.4E-40 T 14-10-2018 IPR038501 Spore germination GerAC superfamily GYO_3613 89779bced83929de53ed21be7ef72b6c 373 Gene3D G3DSA:3.10.450.290 23 90 1.5E-7 T 14-10-2018 GYO_1942 81db0323fe16cec9cf2e3c94d4d5dd0a 77 SUPERFAMILY SSF47336 2 76 4.45E-23 T 14-10-2018 IPR036736 ACP-like superfamily GYO_1942 81db0323fe16cec9cf2e3c94d4d5dd0a 77 TIGRFAM TIGR00517 acyl_carrier: acyl carrier protein 2 77 2.4E-35 T 14-10-2018 IPR003231 Acyl carrier protein (ACP) GO:0006633 Reactome: R-HSA-389661|Reactome: R-HSA-611105|Reactome: R-HSA-6799198|Reactome: R-HSA-77289 GYO_1942 81db0323fe16cec9cf2e3c94d4d5dd0a 77 Hamap MF_01217 Acyl carrier protein [acpP]. 3 77 22.652 T 14-10-2018 IPR003231 Acyl carrier protein (ACP) GO:0006633 Reactome: R-HSA-389661|Reactome: R-HSA-611105|Reactome: R-HSA-6799198|Reactome: R-HSA-77289 GYO_1942 81db0323fe16cec9cf2e3c94d4d5dd0a 77 ProDom PD000887 CARRIER ACYL PHOSPHOPANTETHEINE ACP ACID FATTY BIOSYNTHESIS LIPID SYNTHESIS CHLOROPLAST 55 76 2.0E-5 T 14-10-2018 IPR003231 Acyl carrier protein (ACP) GO:0006633 Reactome: R-HSA-389661|Reactome: R-HSA-611105|Reactome: R-HSA-6799198|Reactome: R-HSA-77289 GYO_1942 81db0323fe16cec9cf2e3c94d4d5dd0a 77 ProSitePatterns PS00012 Phosphopantetheine attachment site. 32 47 - T 14-10-2018 IPR006162 Phosphopantetheine attachment site GYO_1942 81db0323fe16cec9cf2e3c94d4d5dd0a 77 Gene3D G3DSA:1.10.1200.10 1 77 2.5E-29 T 14-10-2018 IPR036736 ACP-like superfamily GYO_1942 81db0323fe16cec9cf2e3c94d4d5dd0a 77 Pfam PF00550 Phosphopantetheine attachment site 6 73 1.5E-15 T 14-10-2018 IPR009081 Phosphopantetheine binding ACP domain GYO_0413 f79fefb4b93624064723b8b013e0f8dc 275 SUPERFAMILY SSF46689 220 267 4.93E-10 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 GYO_0413 f79fefb4b93624064723b8b013e0f8dc 275 SUPERFAMILY SSF51215 12 154 1.28E-28 T 14-10-2018 IPR037923 Transcription regulator HTH-like GYO_0413 f79fefb4b93624064723b8b013e0f8dc 275 Gene3D G3DSA:2.60.120.10 13 101 1.2E-6 T 14-10-2018 IPR014710 RmlC-like jelly roll fold GYO_0413 f79fefb4b93624064723b8b013e0f8dc 275 Gene3D G3DSA:1.10.10.60 164 217 9.2E-12 T 14-10-2018 GYO_0413 f79fefb4b93624064723b8b013e0f8dc 275 Pfam PF12833 Helix-turn-helix domain 191 267 3.1E-19 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 GYO_0413 f79fefb4b93624064723b8b013e0f8dc 275 SUPERFAMILY SSF46689 169 217 7.92E-10 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 GYO_0413 f79fefb4b93624064723b8b013e0f8dc 275 Pfam PF02311 AraC-like ligand binding domain 14 147 8.4E-26 T 14-10-2018 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 GYO_0413 f79fefb4b93624064723b8b013e0f8dc 275 Gene3D G3DSA:1.10.10.60 218 272 6.1E-15 T 14-10-2018 GYO_0413 f79fefb4b93624064723b8b013e0f8dc 275 SMART SM00342 184 266 5.8E-28 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 GYO_4008 a9f38a3d46a4e45e989a13c4f4220e38 137 SMART SM00347 25 124 3.5E-37 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 GYO_4008 a9f38a3d46a4e45e989a13c4f4220e38 137 PRINTS PR00598 Bacterial regulatory protein MarR family signature 49 65 1.9E-7 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 GYO_4008 a9f38a3d46a4e45e989a13c4f4220e38 137 PRINTS PR00598 Bacterial regulatory protein MarR family signature 66 81 1.9E-7 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 GYO_4008 a9f38a3d46a4e45e989a13c4f4220e38 137 PRINTS PR00598 Bacterial regulatory protein MarR family signature 114 134 1.9E-7 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 GYO_4008 a9f38a3d46a4e45e989a13c4f4220e38 137 Pfam PF01047 MarR family 33 88 1.3E-19 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 GYO_4008 a9f38a3d46a4e45e989a13c4f4220e38 137 SUPERFAMILY SSF46785 5 135 1.27E-32 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily GYO_4008 a9f38a3d46a4e45e989a13c4f4220e38 137 Gene3D G3DSA:1.10.10.10 2 137 2.4E-35 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily GYO_0683 9395c3a8165f586758e99698840f9fd6 121 Pfam PF01648 4'-phosphopantetheinyl transferase superfamily 4 112 1.1E-21 T 14-10-2018 IPR008278 4'-phosphopantetheinyl transferase domain GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 GYO_0683 9395c3a8165f586758e99698840f9fd6 121 TIGRFAM TIGR00556 pantethn_trn: phosphopantetheine--protein transferase domain 1 118 8.2E-38 T 14-10-2018 IPR004568 Phosphopantetheine-protein transferase domain GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289 GYO_0683 9395c3a8165f586758e99698840f9fd6 121 TIGRFAM TIGR00516 acpS: holo-[acyl-carrier-protein] synthase 1 120 8.2E-55 T 14-10-2018 IPR002582 Holo-[acyl carrier protein] synthase GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289 GYO_0683 9395c3a8165f586758e99698840f9fd6 121 SUPERFAMILY SSF56214 1 117 2.75E-35 T 14-10-2018 IPR037143 4'-phosphopantetheinyl transferase domain superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 GYO_0683 9395c3a8165f586758e99698840f9fd6 121 Gene3D G3DSA:3.90.470.20 1 121 8.9E-42 T 14-10-2018 IPR037143 4'-phosphopantetheinyl transferase domain superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 GYO_0683 9395c3a8165f586758e99698840f9fd6 121 ProDom PD004282 TRANSFERASE SYNTHASE HOLO-ACYL-CARRIER-PROTEIN HOLO-ACP 4'-PHOSPHOPANTETHEINYL FATTY ACID METAL-BINDING MAGNESIUM LIPID 8 119 7.0E-56 T 14-10-2018 IPR004568 Phosphopantetheine-protein transferase domain GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289 GYO_0683 9395c3a8165f586758e99698840f9fd6 121 Hamap MF_00101 Holo-[acyl-carrier-protein] synthase [acpS]. 3 118 25.339 T 14-10-2018 IPR002582 Holo-[acyl carrier protein] synthase GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289 GYO_2678 2fc77819c18c7d615d244db1ddab37d0 324 Gene3D G3DSA:1.10.150.130 4 135 1.0E-18 T 14-10-2018 IPR010998 Integrase/recombinase, N-terminal GYO_2678 2fc77819c18c7d615d244db1ddab37d0 324 Pfam PF00589 Phage integrase family 140 303 2.4E-31 T 14-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 GYO_2678 2fc77819c18c7d615d244db1ddab37d0 324 SUPERFAMILY SSF56349 7 313 3.83E-52 T 14-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 GYO_2678 2fc77819c18c7d615d244db1ddab37d0 324 Gene3D G3DSA:1.10.443.10 136 322 5.0E-43 T 14-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 GYO_2678 2fc77819c18c7d615d244db1ddab37d0 324 Pfam PF13102 Phage integrase SAM-like domain 18 123 1.1E-6 T 14-10-2018 IPR025269 Phage integrase SAM-like domain GYO_1812 7b2d7f3a27b297d49e79ba2bc535347b 521 Gene3D G3DSA:3.10.170.10 224 376 2.8E-57 T 14-10-2018 GYO_1812 7b2d7f3a27b297d49e79ba2bc535347b 521 SUPERFAMILY SSF55486 222 521 1.52E-100 T 14-10-2018 GYO_1812 7b2d7f3a27b297d49e79ba2bc535347b 521 Gene3D G3DSA:1.10.390.10 377 521 2.2E-54 T 14-10-2018 IPR027268 Peptidase M4/M1, CTD superfamily GYO_1812 7b2d7f3a27b297d49e79ba2bc535347b 521 Pfam PF07504 Fungalysin/Thermolysin Propeptide Motif 78 126 3.5E-15 T 14-10-2018 IPR011096 FTP domain GYO_1812 7b2d7f3a27b297d49e79ba2bc535347b 521 Pfam PF01447 Thermolysin metallopeptidase, catalytic domain 225 372 3.4E-52 T 14-10-2018 IPR013856 Peptidase M4 domain GO:0004222 GYO_1812 7b2d7f3a27b297d49e79ba2bc535347b 521 PRINTS PR00730 Thermolysin metalloprotease (M4) family signature 327 347 9.5E-29 T 14-10-2018 IPR023612 Peptidase M4 GO:0004222|GO:0006508 GYO_1812 7b2d7f3a27b297d49e79ba2bc535347b 521 PRINTS PR00730 Thermolysin metalloprotease (M4) family signature 384 395 9.5E-29 T 14-10-2018 IPR023612 Peptidase M4 GO:0004222|GO:0006508 GYO_1812 7b2d7f3a27b297d49e79ba2bc535347b 521 PRINTS PR00730 Thermolysin metalloprotease (M4) family signature 448 464 9.5E-29 T 14-10-2018 IPR023612 Peptidase M4 GO:0004222|GO:0006508 GYO_1812 7b2d7f3a27b297d49e79ba2bc535347b 521 PRINTS PR00730 Thermolysin metalloprotease (M4) family signature 363 379 9.5E-29 T 14-10-2018 IPR023612 Peptidase M4 GO:0004222|GO:0006508 GYO_1812 7b2d7f3a27b297d49e79ba2bc535347b 521 Pfam PF02868 Thermolysin metallopeptidase, alpha-helical domain 375 520 1.4E-45 T 14-10-2018 IPR001570 Peptidase M4, C-terminal GO:0004222 GYO_1812 7b2d7f3a27b297d49e79ba2bc535347b 521 Pfam PF03413 Peptidase propeptide and YPEB domain 139 215 5.9E-10 T 14-10-2018 IPR025711 PepSY domain GYO_4041 2c98e51a78fd4008859eb0ffcc618133 341 Gene3D G3DSA:3.20.20.70 5 341 2.8E-106 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 GYO_4041 2c98e51a78fd4008859eb0ffcc618133 341 Pfam PF04055 Radical SAM superfamily 21 186 4.9E-34 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 GYO_4041 2c98e51a78fd4008859eb0ffcc618133 341 ProSitePatterns PS01305 moaA / nifB / pqqE family signature. 23 34 - T 14-10-2018 IPR000385 MoaA/nifB/pqqE, iron-sulphur binding, conserved site GO:0003824|GO:0046872|GO:0051539 KEGG: 00790+4.1.99.22|MetaCyc: PWY-6823|Reactome: R-HSA-947581 GYO_4041 2c98e51a78fd4008859eb0ffcc618133 341 TIGRFAM TIGR02666 moaA: molybdenum cofactor biosynthesis protein A 8 341 3.6E-120 T 14-10-2018 IPR013483 Molybdenum cofactor biosynthesis protein A GO:0006777|GO:0046872 KEGG: 00790+4.1.99.22|MetaCyc: PWY-6823|Reactome: R-HSA-947581 GYO_4041 2c98e51a78fd4008859eb0ffcc618133 341 Hamap MF_01225_B GTP 3',8-cyclase [moaA]. 8 341 42.431 T 14-10-2018 IPR013483 Molybdenum cofactor biosynthesis protein A GO:0006777|GO:0046872 KEGG: 00790+4.1.99.22|MetaCyc: PWY-6823|Reactome: R-HSA-947581 GYO_4041 2c98e51a78fd4008859eb0ffcc618133 341 SMART SM00729 17 226 3.7E-21 T 14-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 GYO_4041 2c98e51a78fd4008859eb0ffcc618133 341 Pfam PF13394 4Fe-4S single cluster domain 24 112 1.6E-7 T 14-10-2018 GYO_4041 2c98e51a78fd4008859eb0ffcc618133 341 Pfam PF06463 Molybdenum Cofactor Synthesis C 195 320 1.5E-37 T 14-10-2018 IPR010505 Molybdenum cofactor synthesis C-terminal GO:0006777|GO:0019008|GO:0051539 KEGG: 00790+4.1.99.22|MetaCyc: PWY-6823|Reactome: R-HSA-947581 GYO_4041 2c98e51a78fd4008859eb0ffcc618133 341 SUPERFAMILY SSF102114 9 303 1.07E-80 T 14-10-2018 GYO_3341 7d129011e745b328d464ff9052a678bf 428 TIGRFAM TIGR03026 NDP-sugDHase: nucleotide sugar dehydrogenase 1 408 1.2E-141 T 14-10-2018 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 GYO_3341 7d129011e745b328d464ff9052a678bf 428 SMART SM00984 312 412 2.9E-36 T 14-10-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 GYO_3341 7d129011e745b328d464ff9052a678bf 428 Pfam PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain 1 175 3.0E-62 T 14-10-2018 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 GYO_3341 7d129011e745b328d464ff9052a678bf 428 PIRSF PIRSF500134 1 428 9.7E-141 T 14-10-2018 IPR028357 UDP-glucose 6-dehydrogenase, bacterial type GO:0000271|GO:0003979 KEGG: 00040+1.1.1.22|KEGG: 00053+1.1.1.22|KEGG: 00520+1.1.1.22|MetaCyc: PWY-7346|MetaCyc: PWY-7820 GYO_3341 7d129011e745b328d464ff9052a678bf 428 Pfam PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain 199 289 2.9E-34 T 14-10-2018 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 GYO_3341 7d129011e745b328d464ff9052a678bf 428 SUPERFAMILY SSF52413 298 421 9.16E-30 T 14-10-2018 IPR036220 UDP-glucose/GDP-mannose dehydrogenase, C-terminal domain superfamily Reactome: R-HSA-173599 GYO_3341 7d129011e745b328d464ff9052a678bf 428 SUPERFAMILY SSF48179 199 291 1.63E-29 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 GYO_3341 7d129011e745b328d464ff9052a678bf 428 Pfam PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain 312 411 7.2E-26 T 14-10-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 GYO_3341 7d129011e745b328d464ff9052a678bf 428 Gene3D G3DSA:3.40.50.720 1 195 2.0E-65 T 14-10-2018 GYO_3341 7d129011e745b328d464ff9052a678bf 428 PIRSF PIRSF000124 1 427 1.5E-125 T 14-10-2018 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 GYO_3341 7d129011e745b328d464ff9052a678bf 428 Gene3D G3DSA:1.20.5.100 197 226 6.9E-14 T 14-10-2018 GYO_3341 7d129011e745b328d464ff9052a678bf 428 SUPERFAMILY SSF51735 1 192 8.86E-43 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily GYO_3341 7d129011e745b328d464ff9052a678bf 428 Gene3D G3DSA:3.40.50.720 229 428 1.0E-63 T 14-10-2018 GYO_1947 d13620fe63b58b49583b4bafbb83a1d5 110 Hamap MF_00245 UPF0122 protein . 3 103 22.402 T 14-10-2018 IPR007394 Putative helix-turn-helix protein, YlxM/p13-like GYO_1947 d13620fe63b58b49583b4bafbb83a1d5 110 Gene3D G3DSA:1.10.10.10 1 110 1.1E-36 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily GYO_1947 d13620fe63b58b49583b4bafbb83a1d5 110 SUPERFAMILY SSF88659 3 102 1.03E-32 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like GYO_1947 d13620fe63b58b49583b4bafbb83a1d5 110 Pfam PF04297 Putative helix-turn-helix protein, YlxM / p13 like 3 101 2.4E-42 T 14-10-2018 IPR007394 Putative helix-turn-helix protein, YlxM/p13-like GYO_4098 5bc6c7f1848411141e37fcd936d57eca 399 SUPERFAMILY SSF56024 41 219 4.71E-40 T 14-10-2018 GYO_4098 5bc6c7f1848411141e37fcd936d57eca 399 SUPERFAMILY SSF56024 230 383 3.14E-39 T 14-10-2018 GYO_4098 5bc6c7f1848411141e37fcd936d57eca 399 TIGRFAM TIGR04265 bac_cardiolipin: cardiolipin synthase 37 397 2.4E-100 T 14-10-2018 IPR022924 Cardiolipin synthase GO:0008808|GO:0016780|GO:0032049 GYO_4098 5bc6c7f1848411141e37fcd936d57eca 399 Pfam PF13091 PLD-like domain 241 365 3.9E-28 T 14-10-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 GYO_4098 5bc6c7f1848411141e37fcd936d57eca 399 Pfam PF13091 PLD-like domain 59 170 4.3E-12 T 14-10-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 GYO_4098 5bc6c7f1848411141e37fcd936d57eca 399 Gene3D G3DSA:3.30.870.10 224 396 3.6E-28 T 14-10-2018 GYO_4098 5bc6c7f1848411141e37fcd936d57eca 399 PIRSF PIRSF000850 223 301 3.2E-5 T 14-10-2018 GYO_4098 5bc6c7f1848411141e37fcd936d57eca 399 PIRSF PIRSF000850 296 378 0.14 T 14-10-2018 GYO_4098 5bc6c7f1848411141e37fcd936d57eca 399 PIRSF PIRSF000850 26 214 1.8E-8 T 14-10-2018 GYO_4098 5bc6c7f1848411141e37fcd936d57eca 399 SMART SM00155 312 339 2.3E-6 T 14-10-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 GYO_4098 5bc6c7f1848411141e37fcd936d57eca 399 SMART SM00155 141 168 3.6E-5 T 14-10-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 GYO_4098 5bc6c7f1848411141e37fcd936d57eca 399 Gene3D G3DSA:3.30.870.10 37 223 6.2E-38 T 14-10-2018 GYO_3105 59edc0e0da59f91c5594fada1056eaf5 785 Gene3D G3DSA:1.10.1420.10 19 281 7.1E-9 T 14-10-2018 GYO_3105 59edc0e0da59f91c5594fada1056eaf5 785 Gene3D G3DSA:3.30.1370.110 698 785 1.2E-23 T 14-10-2018 GYO_3105 59edc0e0da59f91c5594fada1056eaf5 785 SMART SM00533 5 315 9.1E-54 T 14-10-2018 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 GYO_3105 59edc0e0da59f91c5594fada1056eaf5 785 SUPERFAMILY SSF48334 17 287 1.2E-29 T 14-10-2018 IPR036187 DNA mismatch repair protein MutS, core domain superfamily GYO_3105 59edc0e0da59f91c5594fada1056eaf5 785 PIRSF PIRSF005814 1 785 4.1E-293 T 14-10-2018 IPR005747 Endonuclease MutS2 GO:0004519|GO:0016887|GO:0030983|GO:0045910 GYO_3105 59edc0e0da59f91c5594fada1056eaf5 785 ProSitePatterns PS00486 DNA mismatch repair proteins mutS family signature. 410 426 - T 14-10-2018 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 GYO_3105 59edc0e0da59f91c5594fada1056eaf5 785 SUPERFAMILY SSF160443 708 785 4.18E-9 T 14-10-2018 IPR036063 Smr domain superfamily GYO_3105 59edc0e0da59f91c5594fada1056eaf5 785 SMART SM00534 328 513 7.7E-85 T 14-10-2018 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 GYO_3105 59edc0e0da59f91c5594fada1056eaf5 785 Hamap MF_00092 Endonuclease MutS2 [mutS2]. 2 784 22.527 T 14-10-2018 IPR005747 Endonuclease MutS2 GO:0004519|GO:0016887|GO:0030983|GO:0045910 GYO_3105 59edc0e0da59f91c5594fada1056eaf5 785 Pfam PF01713 Smr domain 710 785 4.7E-20 T 14-10-2018 IPR002625 Smr domain GYO_3105 59edc0e0da59f91c5594fada1056eaf5 785 SMART SM00463 707 785 9.4E-22 T 14-10-2018 IPR002625 Smr domain GYO_3105 59edc0e0da59f91c5594fada1056eaf5 785 Pfam PF00488 MutS domain V 331 512 3.7E-36 T 14-10-2018 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 GYO_3105 59edc0e0da59f91c5594fada1056eaf5 785 TIGRFAM TIGR01069 mutS2: MutS2 family protein 2 785 0.0 T 14-10-2018 IPR005747 Endonuclease MutS2 GO:0004519|GO:0016887|GO:0030983|GO:0045910 GYO_3105 59edc0e0da59f91c5594fada1056eaf5 785 Gene3D G3DSA:3.40.50.300 293 599 3.8E-84 T 14-10-2018 GYO_3105 59edc0e0da59f91c5594fada1056eaf5 785 SUPERFAMILY SSF52540 292 512 2.05E-47 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase GYO_3105 59edc0e0da59f91c5594fada1056eaf5 785 Gene3D G3DSA:1.10.1420.10 138 259 7.1E-9 T 14-10-2018 GYO_1170 f2f83d7646b1be6ebcfebd70bcbf0762 332 Gene3D G3DSA:3.40.190.10 113 212 1.8E-91 T 14-10-2018 GYO_1170 f2f83d7646b1be6ebcfebd70bcbf0762 332 TIGRFAM TIGR01728 SsuA_fam: ABC transporter, substrate-binding protein, aliphatic sulfonates family 33 320 1.6E-109 T 14-10-2018 IPR010067 Aliphatic sulfonates-binding protein GO:0016020|GO:0042626 GYO_1170 f2f83d7646b1be6ebcfebd70bcbf0762 332 Gene3D G3DSA:3.40.190.10 33 310 1.8E-91 T 14-10-2018 GYO_1170 f2f83d7646b1be6ebcfebd70bcbf0762 332 Pfam PF09084 NMT1/THI5 like 42 254 7.8E-25 T 14-10-2018 IPR015168 SsuA/THI5-like GYO_1170 f2f83d7646b1be6ebcfebd70bcbf0762 332 SMART SM00062 32 254 1.1E-35 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF GYO_1170 f2f83d7646b1be6ebcfebd70bcbf0762 332 SUPERFAMILY SSF53850 31 255 1.01E-48 T 14-10-2018 GYO_1170 f2f83d7646b1be6ebcfebd70bcbf0762 332 Gene3D G3DSA:1.10.8.450 245 278 1.8E-91 T 14-10-2018 GYO_0116 ae2e9e4f1bd58c21dfc852c437a1298c 232 Gene3D G3DSA:3.90.550.10 1 232 1.8E-89 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases GYO_0116 ae2e9e4f1bd58c21dfc852c437a1298c 232 ProSitePatterns PS01295 4-diphosphocytidyl-2C-methyl-D-erythritol synthase signature. 100 107 - T 14-10-2018 IPR018294 4-diphosphocytidyl-2C-methyl-D-erythritol synthase, conserved site GO:0003824|GO:0008299 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 GYO_0116 ae2e9e4f1bd58c21dfc852c437a1298c 232 Pfam PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 5 224 1.4E-93 T 14-10-2018 IPR034683 Cytidylyltransferase IspD/TarI GO:0070567 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 GYO_0116 ae2e9e4f1bd58c21dfc852c437a1298c 232 TIGRFAM TIGR00453 ispD: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 5 223 3.8E-84 T 14-10-2018 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase GO:0008299|GO:0050518 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 GYO_0116 ae2e9e4f1bd58c21dfc852c437a1298c 232 Hamap MF_00108 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [ispD]. 2 223 42.747 T 14-10-2018 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase GO:0008299|GO:0050518 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 GYO_0116 ae2e9e4f1bd58c21dfc852c437a1298c 232 SUPERFAMILY SSF53448 4 224 6.76E-62 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases GYO_2406 1f9215c87a59e21aed914ab053c464fa 177 PIRSF PIRSF019587 4 167 5.3E-68 T 14-10-2018 IPR026038 Putative phosphatidylglycerophosphatase GYO_2406 1f9215c87a59e21aed914ab053c464fa 177 SUPERFAMILY SSF101307 5 162 6.28E-51 T 14-10-2018 IPR036681 PgpA-like superfamily GO:0006629|GO:0008962 GYO_2406 1f9215c87a59e21aed914ab053c464fa 177 Gene3D G3DSA:1.10.3760.10 1 164 1.5E-76 T 14-10-2018 GYO_2406 1f9215c87a59e21aed914ab053c464fa 177 Pfam PF04608 Phosphatidylglycerophosphatase A 25 157 4.6E-19 T 14-10-2018 IPR007686 YutG/PgpA domain GO:0006629|GO:0008962 GYO_3291 9e23f70cdea42aef7265dda0d0b17746 231 SUPERFAMILY SSF46894 128 222 2.78E-22 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 GYO_3291 9e23f70cdea42aef7265dda0d0b17746 231 SMART SM00448 2 112 4.8E-30 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 GYO_3291 9e23f70cdea42aef7265dda0d0b17746 231 SMART SM00862 148 223 7.7E-16 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 GYO_3291 9e23f70cdea42aef7265dda0d0b17746 231 Gene3D G3DSA:1.10.10.10 130 230 1.1E-24 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily GYO_3291 9e23f70cdea42aef7265dda0d0b17746 231 Pfam PF00072 Response regulator receiver domain 5 113 9.1E-22 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 GYO_3291 9e23f70cdea42aef7265dda0d0b17746 231 Gene3D G3DSA:3.40.50.2300 3 127 1.7E-27 T 14-10-2018 GYO_3291 9e23f70cdea42aef7265dda0d0b17746 231 SUPERFAMILY SSF52172 3 125 3.42E-33 T 14-10-2018 IPR011006 CheY-like superfamily GYO_3291 9e23f70cdea42aef7265dda0d0b17746 231 Pfam PF00486 Transcriptional regulatory protein, C terminal 150 222 3.1E-22 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 GYO_0598 95153a2adf6d028f2c0b877fa7cb5306 252 SUPERFAMILY SSF52540 2 226 2.72E-62 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase GYO_0598 95153a2adf6d028f2c0b877fa7cb5306 252 ProSitePatterns PS00211 ABC transporters family signature. 136 150 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 GYO_0598 95153a2adf6d028f2c0b877fa7cb5306 252 Gene3D G3DSA:3.40.50.300 1 251 3.5E-68 T 14-10-2018 GYO_0598 95153a2adf6d028f2c0b877fa7cb5306 252 SMART SM00382 26 213 4.4E-13 T 14-10-2018 IPR003593 AAA+ ATPase domain GYO_0598 95153a2adf6d028f2c0b877fa7cb5306 252 Pfam PF00005 ABC transporter 17 164 2.0E-29 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 GYO_1997 29213892b3af9ba8cbc7c44804564b9d 356 Pfam PF01339 CheB methylesterase 167 347 6.0E-55 T 14-10-2018 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 GYO_1997 29213892b3af9ba8cbc7c44804564b9d 356 Pfam PF00072 Response regulator receiver domain 4 108 3.6E-25 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 GYO_1997 29213892b3af9ba8cbc7c44804564b9d 356 PIRSF PIRSF000876 1 356 2.0E-133 T 14-10-2018 IPR008248 Signal transduction response regulator, chemotaxis, CheB GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 GYO_1997 29213892b3af9ba8cbc7c44804564b9d 356 SMART SM00448 2 125 4.5E-28 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 GYO_1997 29213892b3af9ba8cbc7c44804564b9d 356 SUPERFAMILY SSF52738 164 353 4.32E-61 T 14-10-2018 IPR035909 Methylesterase CheB, C-terminal GYO_1997 29213892b3af9ba8cbc7c44804564b9d 356 Gene3D G3DSA:3.40.50.2300 1 131 7.9E-34 T 14-10-2018 GYO_1997 29213892b3af9ba8cbc7c44804564b9d 356 SUPERFAMILY SSF52172 2 107 1.31E-29 T 14-10-2018 IPR011006 CheY-like superfamily GYO_1997 29213892b3af9ba8cbc7c44804564b9d 356 Hamap MF_00099 Chemotaxis response regulator protein-glutamate methylesterase [cheB]. 2 352 38.353 T 14-10-2018 IPR008248 Signal transduction response regulator, chemotaxis, CheB GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 GYO_1997 29213892b3af9ba8cbc7c44804564b9d 356 Gene3D G3DSA:3.40.50.180 161 351 7.6E-65 T 14-10-2018 IPR035909 Methylesterase CheB, C-terminal GYO_1623 4760373859cefb89b0b9cb46dc6b58d5 399 SUPERFAMILY SSF52343 255 391 1.11E-30 T 14-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain GYO_1623 4760373859cefb89b0b9cb46dc6b58d5 399 Gene3D G3DSA:3.40.50.80 254 398 1.8E-31 T 14-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain GYO_1623 4760373859cefb89b0b9cb46dc6b58d5 399 SUPERFAMILY SSF63380 151 254 8.51E-30 T 14-10-2018 IPR017938 Riboflavin synthase-like beta-barrel GYO_1623 4760373859cefb89b0b9cb46dc6b58d5 399 Gene3D G3DSA:2.40.30.10 151 253 3.3E-38 T 14-10-2018 GYO_1623 4760373859cefb89b0b9cb46dc6b58d5 399 Pfam PF00175 Oxidoreductase NAD-binding domain 264 371 5.8E-16 T 14-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 GYO_1623 4760373859cefb89b0b9cb46dc6b58d5 399 SUPERFAMILY SSF46458 2 143 1.83E-42 T 14-10-2018 IPR009050 Globin-like superfamily GYO_1623 4760373859cefb89b0b9cb46dc6b58d5 399 Hamap MF_01252 Flavohemoprotein [hmp]. 1 395 55.986 T 14-10-2018 IPR023950 Flavohemoprotein GO:0008941|GO:0019825|GO:0020037|GO:0051409|GO:0055114|GO:0071949 GYO_1623 4760373859cefb89b0b9cb46dc6b58d5 399 Pfam PF00970 Oxidoreductase FAD-binding domain 157 252 3.6E-10 T 14-10-2018 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain Reactome: R-HSA-1237044 GYO_1623 4760373859cefb89b0b9cb46dc6b58d5 399 PRINTS PR00410 Phenol hydroxylase reductase family signature 185 197 2.3E-7 T 14-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 GYO_1623 4760373859cefb89b0b9cb46dc6b58d5 399 PRINTS PR00410 Phenol hydroxylase reductase family signature 247 256 2.3E-7 T 14-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 GYO_1623 4760373859cefb89b0b9cb46dc6b58d5 399 PRINTS PR00410 Phenol hydroxylase reductase family signature 263 282 2.3E-7 T 14-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 GYO_1623 4760373859cefb89b0b9cb46dc6b58d5 399 PRINTS PR00410 Phenol hydroxylase reductase family signature 357 365 2.3E-7 T 14-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 GYO_1623 4760373859cefb89b0b9cb46dc6b58d5 399 Pfam PF00042 Globin 7 102 5.5E-10 T 14-10-2018 IPR000971 Globin GO:0020037 GYO_1623 4760373859cefb89b0b9cb46dc6b58d5 399 Gene3D G3DSA:1.10.490.10 1 145 1.1E-58 T 14-10-2018 IPR012292 Globin/Protoglobin GO:0019825|GO:0020037 GYO_2205 dbef7f508bb580dac4ff6b233489fe74 325 Gene3D G3DSA:2.70.98.10 1 325 1.3E-134 T 14-10-2018 IPR014718 Glycoside hydrolase-type carbohydrate-binding GO:0030246 GYO_2205 dbef7f508bb580dac4ff6b233489fe74 325 Pfam PF01263 Aldose 1-epimerase 16 318 3.0E-56 T 14-10-2018 IPR008183 Aldose 1-/Glucose-6-phosphate 1-epimerase GO:0005975|GO:0016853 GYO_2205 dbef7f508bb580dac4ff6b233489fe74 325 SUPERFAMILY SSF74650 13 320 6.28E-54 T 14-10-2018 IPR011013 Galactose mutarotase-like domain superfamily GO:0003824|GO:0005975|GO:0030246 GYO_3343 a2b703166a531ca0e1a95a8b774d9c2c 407 Pfam PF13439 Glycosyltransferase Family 4 68 164 8.9E-9 T 14-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 GYO_3343 a2b703166a531ca0e1a95a8b774d9c2c 407 Gene3D G3DSA:3.40.50.2000 1 173 3.5E-13 T 14-10-2018 GYO_3343 a2b703166a531ca0e1a95a8b774d9c2c 407 Gene3D G3DSA:3.40.50.2000 174 378 1.7E-47 T 14-10-2018 GYO_3343 a2b703166a531ca0e1a95a8b774d9c2c 407 Pfam PF00534 Glycosyl transferases group 1 179 354 2.4E-46 T 14-10-2018 IPR001296 Glycosyl transferase, family 1 GYO_3343 a2b703166a531ca0e1a95a8b774d9c2c 407 SUPERFAMILY SSF53756 1 377 1.14E-67 T 14-10-2018 GYO_0093 38e44094a3f176ffe361d8b3ddab6d92 167 ProSitePatterns PS00794 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase signature. 89 100 - T 14-10-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 GYO_0093 38e44094a3f176ffe361d8b3ddab6d92 167 TIGRFAM TIGR01498 folK: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase 5 134 6.8E-51 T 14-10-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 GYO_0093 38e44094a3f176ffe361d8b3ddab6d92 167 Gene3D G3DSA:3.30.70.560 2 164 1.8E-58 T 14-10-2018 IPR035907 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK superfamily KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 GYO_0093 38e44094a3f176ffe361d8b3ddab6d92 167 Pfam PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) 6 134 4.7E-40 T 14-10-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 GYO_0093 38e44094a3f176ffe361d8b3ddab6d92 167 SUPERFAMILY SSF55083 4 139 1.31E-53 T 14-10-2018 IPR035907 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK superfamily KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 GYO_0430 29c6bcdc3c04aa4b1a598607b2f54293 445 Pfam PF05139 Erythromycin esterase 93 437 2.3E-58 T 14-10-2018 IPR007815 Erythromycin esterase GO:0046677 GYO_0430 29c6bcdc3c04aa4b1a598607b2f54293 445 Gene3D G3DSA:3.40.1660.10 38 438 1.1E-66 T 14-10-2018 GYO_0430 29c6bcdc3c04aa4b1a598607b2f54293 445 Gene3D G3DSA:1.20.1440.30 166 308 1.1E-66 T 14-10-2018 GYO_0430 29c6bcdc3c04aa4b1a598607b2f54293 445 SUPERFAMILY SSF159501 34 441 3.4E-95 T 14-10-2018 GYO_0430 29c6bcdc3c04aa4b1a598607b2f54293 445 Gene3D G3DSA:3.30.1870.10 95 165 1.1E-66 T 14-10-2018 GYO_0152 693b8524dacb38bd5a73d46dbc102a0b 122 ProSitePatterns PS00049 Ribosomal protein L14 signature. 60 86 - T 14-10-2018 IPR019972 Ribosomal protein L14P, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 GYO_0152 693b8524dacb38bd5a73d46dbc102a0b 122 TIGRFAM TIGR01067 rplN_bact: ribosomal protein uL14 1 122 7.1E-58 T 14-10-2018 IPR005745 Ribosomal protein L14P, bacterial-type GO:0003735|GO:0006412|GO:0015934 GYO_0152 693b8524dacb38bd5a73d46dbc102a0b 122 Gene3D G3DSA:2.40.150.20 1 122 6.9E-53 T 14-10-2018 IPR036853 Ribosomal protein L14 superfamily GO:0003735|GO:0005840|GO:0006412 GYO_0152 693b8524dacb38bd5a73d46dbc102a0b 122 SUPERFAMILY SSF50193 1 122 4.84E-50 T 14-10-2018 IPR036853 Ribosomal protein L14 superfamily GO:0003735|GO:0005840|GO:0006412 GYO_0152 693b8524dacb38bd5a73d46dbc102a0b 122 Hamap MF_01367 50S ribosomal protein L14 [rplN]. 1 122 25.427 T 14-10-2018 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 GYO_0152 693b8524dacb38bd5a73d46dbc102a0b 122 SMART SM01374 1 122 1.2E-84 T 14-10-2018 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 GYO_0152 693b8524dacb38bd5a73d46dbc102a0b 122 Pfam PF00238 Ribosomal protein L14p/L23e 1 122 3.9E-54 T 14-10-2018 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 GYO_0051 aad50dc531afcd11c5382a854c55e5dd 292 ProSitePatterns PS01131 Ribosomal RNA adenine dimethylases signature. 52 79 - T 14-10-2018 IPR020596 Ribosomal RNA adenine methylase transferase, conserved site GO:0000154|GO:0000179|GO:0008649 GYO_0051 aad50dc531afcd11c5382a854c55e5dd 292 TIGRFAM TIGR00755 ksgA: ribosomal RNA small subunit methyltransferase A 20 286 2.1E-91 T 14-10-2018 IPR011530 Ribosomal RNA adenine dimethylase GO:0000179|GO:0006364 GYO_0051 aad50dc531afcd11c5382a854c55e5dd 292 SUPERFAMILY SSF53335 16 290 7.7E-75 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase GYO_0051 aad50dc531afcd11c5382a854c55e5dd 292 SMART SM00650 36 212 1.3E-89 T 14-10-2018 IPR020598 Ribosomal RNA adenine methylase transferase, N-terminal GO:0000154|GO:0000179|GO:0008649 GYO_0051 aad50dc531afcd11c5382a854c55e5dd 292 Hamap MF_00607 Ribosomal RNA small subunit methyltransferase A [rsmA]. 20 288 56.325 T 14-10-2018 IPR011530 Ribosomal RNA adenine dimethylase GO:0000179|GO:0006364 GYO_0051 aad50dc531afcd11c5382a854c55e5dd 292 Gene3D G3DSA:1.10.8.100 220 291 1.5E-20 T 14-10-2018 IPR023165 rRNA adenine dimethylase-like Reactome: R-HSA-2151201|Reactome: R-HSA-6793080 GYO_0051 aad50dc531afcd11c5382a854c55e5dd 292 Pfam PF00398 Ribosomal RNA adenine dimethylase 20 281 2.7E-88 T 14-10-2018 IPR001737 Ribosomal RNA adenine methyltransferase KsgA/Erm GYO_0051 aad50dc531afcd11c5382a854c55e5dd 292 Gene3D G3DSA:3.40.50.150 2 216 5.0E-75 T 14-10-2018 GYO_4146 20ef0acabeaa0d3dcaeec9d4bdd011e7 433 Gene3D G3DSA:1.10.3210.10 11 401 1.9E-171 T 14-10-2018 GYO_4146 20ef0acabeaa0d3dcaeec9d4bdd011e7 433 SUPERFAMILY SSF109604 6 412 4.26E-122 T 14-10-2018 GYO_4146 20ef0acabeaa0d3dcaeec9d4bdd011e7 433 Gene3D G3DSA:1.20.1250.30 235 412 1.9E-171 T 14-10-2018 GYO_4146 20ef0acabeaa0d3dcaeec9d4bdd011e7 433 SMART SM00471 57 187 6.7E-14 T 14-10-2018 IPR003607 HD/PDEase domain GYO_4146 20ef0acabeaa0d3dcaeec9d4bdd011e7 433 Pfam PF01966 HD domain 61 181 3.8E-18 T 14-10-2018 IPR006674 HD domain GYO_4411 8d9ce4f67e39c23a4ce31c8daa5e509b 468 Gene3D G3DSA:1.20.5.320 437 468 1.5E-18 T 14-10-2018 GYO_4411 8d9ce4f67e39c23a4ce31c8daa5e509b 468 ProSitePatterns PS00461 6-phosphogluconate dehydrogenase signature. 252 264 - T 14-10-2018 IPR006184 6-phosphogluconate-binding site GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 GYO_4411 8d9ce4f67e39c23a4ce31c8daa5e509b 468 PIRSF PIRSF000109 1 468 3.1E-231 T 14-10-2018 IPR006113 6-phosphogluconate dehydrogenase, decarboxylating GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 GYO_4411 8d9ce4f67e39c23a4ce31c8daa5e509b 468 Gene3D G3DSA:1.10.1040.10 179 434 2.8E-100 T 14-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 GYO_4411 8d9ce4f67e39c23a4ce31c8daa5e509b 468 SMART SM01350 177 467 1.1E-198 T 14-10-2018 IPR006114 6-phosphogluconate dehydrogenase, C-terminal GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 GYO_4411 8d9ce4f67e39c23a4ce31c8daa5e509b 468 SUPERFAMILY SSF48179 175 467 8.16E-121 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 GYO_4411 8d9ce4f67e39c23a4ce31c8daa5e509b 468 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 65 94 1.2E-80 T 14-10-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0004616|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 GYO_4411 8d9ce4f67e39c23a4ce31c8daa5e509b 468 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 3 26 1.2E-80 T 14-10-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0004616|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 GYO_4411 8d9ce4f67e39c23a4ce31c8daa5e509b 468 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 118 143 1.2E-80 T 14-10-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0004616|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 GYO_4411 8d9ce4f67e39c23a4ce31c8daa5e509b 468 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 248 275 1.2E-80 T 14-10-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0004616|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 GYO_4411 8d9ce4f67e39c23a4ce31c8daa5e509b 468 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 356 378 1.2E-80 T 14-10-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0004616|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 GYO_4411 8d9ce4f67e39c23a4ce31c8daa5e509b 468 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 166 194 1.2E-80 T 14-10-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0004616|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 GYO_4411 8d9ce4f67e39c23a4ce31c8daa5e509b 468 SUPERFAMILY SSF51735 4 175 8.97E-54 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily GYO_4411 8d9ce4f67e39c23a4ce31c8daa5e509b 468 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 4 172 3.7E-52 T 14-10-2018 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0050661 GYO_4411 8d9ce4f67e39c23a4ce31c8daa5e509b 468 Pfam PF00393 6-phosphogluconate dehydrogenase, C-terminal domain 177 466 1.8E-123 T 14-10-2018 IPR006114 6-phosphogluconate dehydrogenase, C-terminal GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 GYO_4411 8d9ce4f67e39c23a4ce31c8daa5e509b 468 Gene3D G3DSA:3.40.50.720 2 178 3.7E-56 T 14-10-2018 GYO_4411 8d9ce4f67e39c23a4ce31c8daa5e509b 468 TIGRFAM TIGR00873 gnd: 6-phosphogluconate dehydrogenase (decarboxylating) 5 468 5.8E-230 T 14-10-2018 IPR006113 6-phosphogluconate dehydrogenase, decarboxylating GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 GYO_4054 f39114830522ae58ed6466bf9f59fc45 132 Pfam PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain 5 82 3.4E-30 T 14-10-2018 IPR020546 ATP synthase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 GYO_4054 f39114830522ae58ed6466bf9f59fc45 132 Hamap MF_00530 ATP synthase epsilon chain [atpC]. 2 129 23.903 T 14-10-2018 IPR001469 ATP synthase, F1 complex, delta/epsilon subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 GYO_4054 f39114830522ae58ed6466bf9f59fc45 132 Gene3D G3DSA:2.60.15.10 1 88 2.8E-33 T 14-10-2018 IPR036771 F0F1 ATP synthase delta/epsilon subunit, N-terminal Reactome: R-HSA-163210|Reactome: R-HSA-8949613 GYO_4054 f39114830522ae58ed6466bf9f59fc45 132 SUPERFAMILY SSF46604 87 130 1.07E-8 T 14-10-2018 IPR036794 ATP synthase delta/epsilon subunit, C-terminal domain superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 GYO_4054 f39114830522ae58ed6466bf9f59fc45 132 TIGRFAM TIGR01216 ATP_synt_epsi: ATP synthase F1, epsilon subunit 3 130 7.6E-44 T 14-10-2018 IPR001469 ATP synthase, F1 complex, delta/epsilon subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 GYO_4054 f39114830522ae58ed6466bf9f59fc45 132 ProDom PD000944 ATP SYNTHASE ION EPSILON SUBUNIT HYDROLASE CF1 SYNTHESIS CHAIN HYDROGEN 9 86 1.0E-37 T 14-10-2018 IPR020546 ATP synthase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 GYO_4054 f39114830522ae58ed6466bf9f59fc45 132 Gene3D G3DSA:1.20.5.440 89 131 1.3E-14 T 14-10-2018 GYO_4054 f39114830522ae58ed6466bf9f59fc45 132 SUPERFAMILY SSF51344 3 84 3.66E-25 T 14-10-2018 IPR036771 F0F1 ATP synthase delta/epsilon subunit, N-terminal Reactome: R-HSA-163210|Reactome: R-HSA-8949613 GYO_4054 f39114830522ae58ed6466bf9f59fc45 132 Pfam PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain 88 131 9.0E-15 T 14-10-2018 IPR020547 ATP synthase delta/epsilon subunit, C-terminal domain GYO_3916 04555321a7ca2ca332f3a3486a8112d6 717 TIGRFAM TIGR02669 SpoIID_LytB: SpoIID/LytB domain 420 715 1.5E-83 T 14-10-2018 IPR013486 Sporulation stage II protein D, amidase enhancer LytB GO:0030435 GYO_3916 04555321a7ca2ca332f3a3486a8112d6 717 Pfam PF04122 Putative cell wall binding repeat 2 67 154 2.0E-16 T 14-10-2018 IPR007253 Putative cell wall binding repeat 2 GYO_3916 04555321a7ca2ca332f3a3486a8112d6 717 Pfam PF04122 Putative cell wall binding repeat 2 256 341 4.2E-14 T 14-10-2018 IPR007253 Putative cell wall binding repeat 2 GYO_3916 04555321a7ca2ca332f3a3486a8112d6 717 Pfam PF04122 Putative cell wall binding repeat 2 165 245 4.3E-15 T 14-10-2018 IPR007253 Putative cell wall binding repeat 2 GYO_3916 04555321a7ca2ca332f3a3486a8112d6 717 Pfam PF08486 Stage II sporulation protein 420 493 1.2E-22 T 14-10-2018 IPR013693 Sporulation stage II protein D, amidase enhancer LytB N-terminal GYO_3916 04555321a7ca2ca332f3a3486a8112d6 717 Gene3D G3DSA:3.40.50.12090 90 183 4.9E-9 T 14-10-2018 GYO_0193 0054b9ed03cfb5475afbc0846ed66c43 77 SUPERFAMILY SSF47413 9 70 1.85E-11 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 GYO_0193 0054b9ed03cfb5475afbc0846ed66c43 77 Gene3D G3DSA:1.10.260.40 8 76 9.9E-10 T 14-10-2018 GYO_0193 0054b9ed03cfb5475afbc0846ed66c43 77 Pfam PF01381 Helix-turn-helix 9 64 2.6E-6 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 GYO_0193 0054b9ed03cfb5475afbc0846ed66c43 77 SMART SM00530 8 64 5.4E-7 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 GYO_0272 0054b9ed03cfb5475afbc0846ed66c43 77 SUPERFAMILY SSF47413 9 70 1.85E-11 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 GYO_0272 0054b9ed03cfb5475afbc0846ed66c43 77 Gene3D G3DSA:1.10.260.40 8 76 9.9E-10 T 14-10-2018 GYO_0272 0054b9ed03cfb5475afbc0846ed66c43 77 Pfam PF01381 Helix-turn-helix 9 64 2.6E-6 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 GYO_0272 0054b9ed03cfb5475afbc0846ed66c43 77 SMART SM00530 8 64 5.4E-7 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 GYO_1898 82b0ca1e92013e3db69711494232d7b8 304 Pfam PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain 2 140 4.6E-45 T 14-10-2018 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding GO:0006520|GO:0016743 GYO_1898 82b0ca1e92013e3db69711494232d7b8 304 Pfam PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain 146 285 5.6E-21 T 14-10-2018 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain GO:0006520|GO:0016597|GO:0016743 GYO_1898 82b0ca1e92013e3db69711494232d7b8 304 Gene3D G3DSA:3.40.50.1370 127 268 5.5E-112 T 14-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 GYO_1898 82b0ca1e92013e3db69711494232d7b8 304 PRINTS PR00101 Aspartate carbamoyltransferase signature 71 80 1.1E-33 T 14-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 GYO_1898 82b0ca1e92013e3db69711494232d7b8 304 PRINTS PR00101 Aspartate carbamoyltransferase signature 207 216 1.1E-33 T 14-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 GYO_1898 82b0ca1e92013e3db69711494232d7b8 304 PRINTS PR00101 Aspartate carbamoyltransferase signature 126 143 1.1E-33 T 14-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 GYO_1898 82b0ca1e92013e3db69711494232d7b8 304 PRINTS PR00101 Aspartate carbamoyltransferase signature 270 284 1.1E-33 T 14-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 GYO_1898 82b0ca1e92013e3db69711494232d7b8 304 PRINTS PR00101 Aspartate carbamoyltransferase signature 33 55 1.1E-33 T 14-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 GYO_1898 82b0ca1e92013e3db69711494232d7b8 304 PRINTS PR00101 Aspartate carbamoyltransferase signature 246 251 1.1E-33 T 14-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 GYO_1898 82b0ca1e92013e3db69711494232d7b8 304 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 127 138 7.8E-24 T 14-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 GYO_1898 82b0ca1e92013e3db69711494232d7b8 304 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 254 277 7.8E-24 T 14-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 GYO_1898 82b0ca1e92013e3db69711494232d7b8 304 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 43 62 7.8E-24 T 14-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 GYO_1898 82b0ca1e92013e3db69711494232d7b8 304 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 242 251 7.8E-24 T 14-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 GYO_1898 82b0ca1e92013e3db69711494232d7b8 304 ProSitePatterns PS00097 Aspartate and ornithine carbamoyltransferases signature. 43 50 - T 14-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 GYO_1898 82b0ca1e92013e3db69711494232d7b8 304 Gene3D G3DSA:3.40.50.1370 6 285 5.5E-112 T 14-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 GYO_1898 82b0ca1e92013e3db69711494232d7b8 304 Hamap MF_00001 Aspartate carbamoyltransferase [pyrB]. 1 291 39.853 T 14-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 GYO_1898 82b0ca1e92013e3db69711494232d7b8 304 TIGRFAM TIGR00670 asp_carb_tr: aspartate carbamoyltransferase 2 289 1.6E-108 T 14-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 GYO_1898 82b0ca1e92013e3db69711494232d7b8 304 SUPERFAMILY SSF53671 1 289 1.83E-94 T 14-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 GYO_4518 658614a3d98cec8739ceda38c6e40375 208 Pfam PF14804 Jag N-terminus 8 54 3.7E-20 T 14-10-2018 IPR032782 Jag, N-terminal GYO_4518 658614a3d98cec8739ceda38c6e40375 208 Gene3D G3DSA:3.30.1370.50 141 208 6.4E-24 T 14-10-2018 IPR036867 R3H domain superfamily GO:0003676 GYO_4518 658614a3d98cec8739ceda38c6e40375 208 SMART SM01245 5 57 1.7E-22 T 14-10-2018 IPR032782 Jag, N-terminal GYO_4518 658614a3d98cec8739ceda38c6e40375 208 SUPERFAMILY SSF82708 148 207 4.71E-9 T 14-10-2018 IPR036867 R3H domain superfamily GO:0003676 GYO_4518 658614a3d98cec8739ceda38c6e40375 208 Pfam PF13083 KH domain 67 128 1.2E-12 T 14-10-2018 GYO_4518 658614a3d98cec8739ceda38c6e40375 208 SMART SM00393 126 207 2.9E-24 T 14-10-2018 IPR001374 R3H domain GO:0003676 GYO_4518 658614a3d98cec8739ceda38c6e40375 208 Pfam PF01424 R3H domain 145 205 8.4E-16 T 14-10-2018 IPR001374 R3H domain GO:0003676 GYO_4518 658614a3d98cec8739ceda38c6e40375 208 Gene3D G3DSA:3.30.300.20 59 140 3.4E-22 T 14-10-2018 IPR015946 K homology domain-like, alpha/beta GYO_4518 658614a3d98cec8739ceda38c6e40375 208 Gene3D G3DSA:3.30.30.80 1 57 2.2E-20 T 14-10-2018 IPR038247 Jag, N-terminal domain superfamily GYO_2813 6f44c9dc901502f2468de762b279e539 311 TIGRFAM TIGR00406 prmA: ribosomal protein L11 methyltransferase 3 305 5.9E-124 T 14-10-2018 IPR004498 Ribosomal protein L11 methyltransferase GO:0006479|GO:0008276 GYO_2813 6f44c9dc901502f2468de762b279e539 311 PIRSF PIRSF000401 1 311 4.8E-110 T 14-10-2018 IPR004498 Ribosomal protein L11 methyltransferase GO:0006479|GO:0008276 GYO_2813 6f44c9dc901502f2468de762b279e539 311 Gene3D G3DSA:3.40.50.150 116 311 2.3E-63 T 14-10-2018 GYO_2813 6f44c9dc901502f2468de762b279e539 311 Hamap MF_00735 Ribosomal protein L11 methyltransferase [prmA]. 3 311 36.262 T 14-10-2018 IPR004498 Ribosomal protein L11 methyltransferase GO:0006479|GO:0008276 GYO_2813 6f44c9dc901502f2468de762b279e539 311 Pfam PF06325 Ribosomal protein L11 methyltransferase (PrmA) 2 311 4.1E-110 T 14-10-2018 GYO_2813 6f44c9dc901502f2468de762b279e539 311 SUPERFAMILY SSF53335 94 310 2.22E-47 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase GYO_1528 bfdcbcc8d6ee81636f61e70ce8d207fa 396 SUPERFAMILY SSF48264 23 396 4.06E-97 T 14-10-2018 IPR036396 Cytochrome P450 superfamily GO:0005506|GO:0016705|GO:0020037|GO:0055114 GYO_1528 bfdcbcc8d6ee81636f61e70ce8d207fa 396 ProSitePatterns PS00086 Cytochrome P450 cysteine heme-iron ligand signature. 342 351 - T 14-10-2018 IPR017972 Cytochrome P450, conserved site GO:0016705|GO:0055114 GYO_1528 bfdcbcc8d6ee81636f61e70ce8d207fa 396 PRINTS PR00385 P450 superfamily signature 274 285 5.9E-6 T 14-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 GYO_1528 bfdcbcc8d6ee81636f61e70ce8d207fa 396 PRINTS PR00385 P450 superfamily signature 239 256 5.9E-6 T 14-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 GYO_1528 bfdcbcc8d6ee81636f61e70ce8d207fa 396 PRINTS PR00385 P450 superfamily signature 349 360 5.9E-6 T 14-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 GYO_1528 bfdcbcc8d6ee81636f61e70ce8d207fa 396 PRINTS PR00385 P450 superfamily signature 340 349 5.9E-6 T 14-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 GYO_1528 bfdcbcc8d6ee81636f61e70ce8d207fa 396 Pfam PF00067 Cytochrome P450 270 383 8.6E-22 T 14-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 GYO_1528 bfdcbcc8d6ee81636f61e70ce8d207fa 396 Pfam PF00067 Cytochrome P450 49 266 1.2E-17 T 14-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 GYO_1528 bfdcbcc8d6ee81636f61e70ce8d207fa 396 PRINTS PR00359 B-class P450 signature 291 318 6.1E-57 T 14-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 GYO_1528 bfdcbcc8d6ee81636f61e70ce8d207fa 396 PRINTS PR00359 B-class P450 signature 193 215 6.1E-57 T 14-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 GYO_1528 bfdcbcc8d6ee81636f61e70ce8d207fa 396 PRINTS PR00359 B-class P450 signature 130 146 6.1E-57 T 14-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 GYO_1528 bfdcbcc8d6ee81636f61e70ce8d207fa 396 PRINTS PR00359 B-class P450 signature 274 285 6.1E-57 T 14-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 GYO_1528 bfdcbcc8d6ee81636f61e70ce8d207fa 396 PRINTS PR00359 B-class P450 signature 147 162 6.1E-57 T 14-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 GYO_1528 bfdcbcc8d6ee81636f61e70ce8d207fa 396 PRINTS PR00359 B-class P450 signature 340 349 6.1E-57 T 14-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 GYO_1528 bfdcbcc8d6ee81636f61e70ce8d207fa 396 PRINTS PR00359 B-class P450 signature 84 95 6.1E-57 T 14-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 GYO_1528 bfdcbcc8d6ee81636f61e70ce8d207fa 396 PRINTS PR00359 B-class P450 signature 349 360 6.1E-57 T 14-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 GYO_1528 bfdcbcc8d6ee81636f61e70ce8d207fa 396 PRINTS PR00359 B-class P450 signature 319 334 6.1E-57 T 14-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 GYO_1528 bfdcbcc8d6ee81636f61e70ce8d207fa 396 Gene3D G3DSA:1.10.630.10 2 396 3.6E-131 T 14-10-2018 IPR036396 Cytochrome P450 superfamily GO:0005506|GO:0016705|GO:0020037|GO:0055114 GYO_4033 007fa9f31252686e90f3b5d7e736e69b 249 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 222 244 3.2E-5 T 14-10-2018 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal GYO_4033 007fa9f31252686e90f3b5d7e736e69b 249 SMART SM00382 29 222 2.5E-4 T 14-10-2018 IPR003593 AAA+ ATPase domain GYO_4033 007fa9f31252686e90f3b5d7e736e69b 249 Pfam PF00005 ABC transporter 21 175 2.6E-27 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 GYO_4033 007fa9f31252686e90f3b5d7e736e69b 249 TIGRFAM TIGR03411 urea_trans_UrtD: urea ABC transporter, ATP-binding protein UrtD 4 245 9.0E-109 T 14-10-2018 IPR017781 ABC transporter, urea, ATP-binding protein, UrtD GYO_4033 007fa9f31252686e90f3b5d7e736e69b 249 SUPERFAMILY SSF52540 3 244 1.15E-54 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase GYO_4033 007fa9f31252686e90f3b5d7e736e69b 249 Gene3D G3DSA:3.40.50.300 3 246 6.7E-54 T 14-10-2018 GYO_4423 8bb8ddc966141cff04665fbd5f5df282 209 Pfam PF00005 ABC transporter 16 142 5.2E-13 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 GYO_4423 8bb8ddc966141cff04665fbd5f5df282 209 SMART SM00382 25 209 0.001 T 14-10-2018 IPR003593 AAA+ ATPase domain GYO_4423 8bb8ddc966141cff04665fbd5f5df282 209 SUPERFAMILY SSF52540 3 204 1.18E-27 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase GYO_4423 8bb8ddc966141cff04665fbd5f5df282 209 Gene3D G3DSA:3.40.50.300 1 205 1.2E-28 T 14-10-2018 GYO_1971 656d017178dc564335f6ee8cd53d1939 259 Pfam PF06018 CodY GAF-like domain 3 178 3.4E-83 T 14-10-2018 IPR010312 GTP-sensing transcriptional pleiotropic repressor CodY, N-terminal GO:0003677|GO:0005525 GYO_1971 656d017178dc564335f6ee8cd53d1939 259 Gene3D G3DSA:3.30.450.40 1 159 1.0E-73 T 14-10-2018 IPR029016 GAF-like domain superfamily GYO_1971 656d017178dc564335f6ee8cd53d1939 259 SUPERFAMILY SSF46785 167 256 4.85E-42 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily GYO_1971 656d017178dc564335f6ee8cd53d1939 259 TIGRFAM TIGR02787 codY_Gpos: GTP-sensing transcriptional pleiotropic repressor CodY 3 253 8.5E-131 T 14-10-2018 IPR014154 GTP-sensing transcriptional pleiotropic repressor CodY GO:0003677|GO:0003700|GO:0005525|GO:0045892 GYO_1971 656d017178dc564335f6ee8cd53d1939 259 Gene3D G3DSA:1.10.10.10 160 259 1.0E-47 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily GYO_1971 656d017178dc564335f6ee8cd53d1939 259 Hamap MF_00621 GTP-sensing transcriptional pleiotropic repressor CodY [codY]. 1 259 150.119 T 14-10-2018 IPR014154 GTP-sensing transcriptional pleiotropic repressor CodY GO:0003677|GO:0003700|GO:0005525|GO:0045892 GYO_1971 656d017178dc564335f6ee8cd53d1939 259 PIRSF PIRSF011572 1 257 4.5E-124 T 14-10-2018 IPR014154 GTP-sensing transcriptional pleiotropic repressor CodY GO:0003677|GO:0003700|GO:0005525|GO:0045892 GYO_1971 656d017178dc564335f6ee8cd53d1939 259 Pfam PF08222 CodY helix-turn-helix domain 198 257 5.4E-37 T 14-10-2018 IPR013198 GTP-sensing helix-turn-helix, CodY, C-terminal GYO_1052 dcd9e7ff8acda6ed35729a1f99b71844 395 ProSitePatterns PS00216 Sugar transport proteins signature 1. 62 79 - T 14-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 GYO_1052 dcd9e7ff8acda6ed35729a1f99b71844 395 SUPERFAMILY SSF103473 11 390 7.72E-46 T 14-10-2018 IPR036259 MFS transporter superfamily GYO_1052 dcd9e7ff8acda6ed35729a1f99b71844 395 Pfam PF07690 Major Facilitator Superfamily 13 325 2.8E-31 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 GYO_1052 dcd9e7ff8acda6ed35729a1f99b71844 395 Gene3D G3DSA:1.20.1250.20 2 191 1.4E-21 T 14-10-2018 GYO_1052 dcd9e7ff8acda6ed35729a1f99b71844 395 Gene3D G3DSA:1.20.1250.20 205 391 4.6E-19 T 14-10-2018 GYO_4241 f7d6a8c040dff8ed1527023f2c9931c8 237 Pfam PF09529 Integral membrane protein (intg_mem_TP0381) 16 232 3.1E-55 T 14-10-2018 IPR011737 Conserved hypothetical protein CHP02206, TP0381 GYO_4241 f7d6a8c040dff8ed1527023f2c9931c8 237 TIGRFAM TIGR02206 intg_mem_TP0381: conserved hypothetical integral membrane protein TIGR02206 12 235 2.6E-81 T 14-10-2018 IPR011737 Conserved hypothetical protein CHP02206, TP0381 GYO_2552 571adc9527cdb1613926e7bde6993c99 382 Gene3D G3DSA:3.40.710.10 31 266 8.7E-90 T 14-10-2018 GYO_2552 571adc9527cdb1613926e7bde6993c99 382 Pfam PF00768 D-alanyl-D-alanine carboxypeptidase 22 250 1.2E-79 T 14-10-2018 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal GO:0006508|GO:0009002 GYO_2552 571adc9527cdb1613926e7bde6993c99 382 SMART SM00936 267 357 2.4E-4 T 14-10-2018 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 GYO_2552 571adc9527cdb1613926e7bde6993c99 382 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 59 70 6.7E-17 T 14-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 GYO_2552 571adc9527cdb1613926e7bde6993c99 382 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 134 147 6.7E-17 T 14-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 GYO_2552 571adc9527cdb1613926e7bde6993c99 382 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 107 124 6.7E-17 T 14-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 GYO_2552 571adc9527cdb1613926e7bde6993c99 382 Gene3D G3DSA:2.30.140.30 267 358 4.7E-38 T 14-10-2018 GYO_2552 571adc9527cdb1613926e7bde6993c99 382 SUPERFAMILY SSF56601 1 267 1.98E-68 T 14-10-2018 IPR012338 Beta-lactamase/transpeptidase-like GYO_2552 571adc9527cdb1613926e7bde6993c99 382 Pfam PF07943 Penicillin-binding protein 5, C-terminal domain 267 355 1.7E-9 T 14-10-2018 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 GYO_1368 c72af2993534519224a74df6aafc5dda 391 Pfam PF00149 Calcineurin-like phosphoesterase 1 223 5.1E-13 T 14-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 GYO_1368 c72af2993534519224a74df6aafc5dda 391 SUPERFAMILY SSF56300 1 330 2.09E-53 T 14-10-2018 GYO_1368 c72af2993534519224a74df6aafc5dda 391 Gene3D G3DSA:3.60.21.10 1 272 1.9E-74 T 14-10-2018 IPR029052 Metallo-dependent phosphatase-like GYO_1368 c72af2993534519224a74df6aafc5dda 391 TIGRFAM TIGR00619 sbcd: exonuclease SbcCD, D subunit 1 252 3.8E-88 T 14-10-2018 IPR004593 Nuclease SbcCD subunit D GO:0004519|GO:0006259|GO:0008408 GYO_1368 c72af2993534519224a74df6aafc5dda 391 Pfam PF12320 Type 5 capsule protein repressor C-terminal domain 276 365 7.6E-6 T 14-10-2018 IPR026843 Nuclease SbcCD subunit D, C-terminal domain GYO_2515 19b004993f4c5904ed2ecf0d9ef93314 297 ProDom PD128584 YPHB BH1976 TRANSMEMBRANE MEMBRANE SEAA 1 280 1.0E-130 T 14-10-2018 GYO_2515 19b004993f4c5904ed2ecf0d9ef93314 297 Pfam PF14045 YIEGIA protein 8 287 2.5E-126 T 14-10-2018 IPR025918 YIEGIA protein GYO_2953 08b4fde37a9630fdb7e97d46209d6078 1054 SUPERFAMILY SSF52218 483 634 1.0E-40 T 14-10-2018 IPR029039 Flavoprotein-like superfamily GYO_2953 08b4fde37a9630fdb7e97d46209d6078 1054 Pfam PF00258 Flavodoxin 488 620 1.5E-24 T 14-10-2018 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 GYO_2953 08b4fde37a9630fdb7e97d46209d6078 1054 Pfam PF00067 Cytochrome P450 17 450 1.4E-84 T 14-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 GYO_2953 08b4fde37a9630fdb7e97d46209d6078 1054 Gene3D G3DSA:3.40.50.360 483 634 2.0E-41 T 14-10-2018 IPR029039 Flavoprotein-like superfamily GYO_2953 08b4fde37a9630fdb7e97d46209d6078 1054 Gene3D G3DSA:3.40.50.80 893 1053 2.2E-57 T 14-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain GYO_2953 08b4fde37a9630fdb7e97d46209d6078 1054 SUPERFAMILY SSF48264 6 454 4.85E-109 T 14-10-2018 IPR036396 Cytochrome P450 superfamily GO:0005506|GO:0016705|GO:0020037|GO:0055114 GYO_2953 08b4fde37a9630fdb7e97d46209d6078 1054 Gene3D G3DSA:1.20.990.10 708 830 7.6E-71 T 14-10-2018 IPR023173 NADPH-cytochrome p450 reductase, FAD-binding, alpha-helical domain superfamily GO:0016491|GO:0055114 GYO_2953 08b4fde37a9630fdb7e97d46209d6078 1054 Pfam PF00667 FAD binding domain 666 872 7.1E-43 T 14-10-2018 IPR003097 Sulfite reductase [NADPH] flavoprotein alpha-component-like, FAD-binding GO:0016491|GO:0055114 GYO_2953 08b4fde37a9630fdb7e97d46209d6078 1054 PRINTS PR00369 Flavodoxin signature 565 575 1.2E-10 T 14-10-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 GYO_2953 08b4fde37a9630fdb7e97d46209d6078 1054 PRINTS PR00369 Flavodoxin signature 534 545 1.2E-10 T 14-10-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 GYO_2953 08b4fde37a9630fdb7e97d46209d6078 1054 PRINTS PR00369 Flavodoxin signature 590 609 1.2E-10 T 14-10-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 GYO_2953 08b4fde37a9630fdb7e97d46209d6078 1054 PRINTS PR00369 Flavodoxin signature 487 500 1.2E-10 T 14-10-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 GYO_2953 08b4fde37a9630fdb7e97d46209d6078 1054 PIRSF PIRSF000209 1 1054 0.0 T 14-10-2018 IPR023206 Bifunctional cytochrome P450/NADPH--cytochrome P450 reductase GO:0003958|GO:0055114|GO:0070330 KEGG: 00071+1.14.14.1|KEGG: 00140+1.14.14.1|KEGG: 00232+1.14.14.1|KEGG: 00380+1.14.14.1|KEGG: 00590+1.14.14.1|KEGG: 00591+1.14.14.1|KEGG: 00627+1.14.14.1|KEGG: 00830+1.14.14.1|KEGG: 00980+1.14.14.1|KEGG: 00982+1.14.14.1|MetaCyc: PWY-5451|MetaCyc: PWY-5665|MetaCyc: PWY-6398|MetaCyc: PWY-6992|MetaCyc: PWY-7466|MetaCyc: PWY-7826 GYO_2953 08b4fde37a9630fdb7e97d46209d6078 1054 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 1000 1008 4.9E-33 T 14-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 GYO_2953 08b4fde37a9630fdb7e97d46209d6078 1054 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 867 876 4.9E-33 T 14-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 GYO_2953 08b4fde37a9630fdb7e97d46209d6078 1054 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 698 708 4.9E-33 T 14-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 GYO_2953 08b4fde37a9630fdb7e97d46209d6078 1054 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 904 923 4.9E-33 T 14-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 GYO_2953 08b4fde37a9630fdb7e97d46209d6078 1054 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 977 993 4.9E-33 T 14-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 GYO_2953 08b4fde37a9630fdb7e97d46209d6078 1054 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 832 839 4.9E-33 T 14-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 GYO_2953 08b4fde37a9630fdb7e97d46209d6078 1054 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 933 942 4.9E-33 T 14-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 GYO_2953 08b4fde37a9630fdb7e97d46209d6078 1054 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 946 957 4.9E-33 T 14-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 GYO_2953 08b4fde37a9630fdb7e97d46209d6078 1054 Pfam PF00175 Oxidoreductase NAD-binding domain 905 1015 2.1E-15 T 14-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 GYO_2953 08b4fde37a9630fdb7e97d46209d6078 1054 SUPERFAMILY SSF63380 660 888 1.1E-65 T 14-10-2018 IPR017938 Riboflavin synthase-like beta-barrel GYO_2953 08b4fde37a9630fdb7e97d46209d6078 1054 SUPERFAMILY SSF52343 892 1051 1.02E-45 T 14-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain GYO_2953 08b4fde37a9630fdb7e97d46209d6078 1054 ProSitePatterns PS00086 Cytochrome P450 cysteine heme-iron ligand signature. 396 405 - T 14-10-2018 IPR017972 Cytochrome P450, conserved site GO:0016705|GO:0055114 GYO_2953 08b4fde37a9630fdb7e97d46209d6078 1054 Gene3D G3DSA:1.10.630.10 4 473 9.1E-170 T 14-10-2018 IPR036396 Cytochrome P450 superfamily GO:0005506|GO:0016705|GO:0020037|GO:0055114 GYO_2953 08b4fde37a9630fdb7e97d46209d6078 1054 Gene3D G3DSA:2.40.30.10 670 880 7.6E-71 T 14-10-2018 GYO_0053 4568ade5899358559f0c9c949a5a1a7d 86 PIRSF PIRSF037257 1 85 6.3E-37 T 14-10-2018 IPR009366 Protein Veg GO:0006355 GYO_0053 4568ade5899358559f0c9c949a5a1a7d 86 Pfam PF06257 Biofilm formation stimulator VEG 4 74 3.6E-31 T 14-10-2018 IPR009366 Protein Veg GO:0006355 GYO_0053 4568ade5899358559f0c9c949a5a1a7d 86 Gene3D G3DSA:2.30.30.100 1 78 1.9E-25 T 14-10-2018 GYO_1313 005fb9068bebfe7b03e5aa028e529794 325 SUPERFAMILY SSF53901 2 323 3.28E-60 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 GYO_1313 005fb9068bebfe7b03e5aa028e529794 325 Pfam PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III 107 185 1.1E-27 T 14-10-2018 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 GYO_1313 005fb9068bebfe7b03e5aa028e529794 325 Pfam PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal 234 323 1.1E-30 T 14-10-2018 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 GYO_1313 005fb9068bebfe7b03e5aa028e529794 325 Gene3D G3DSA:3.40.47.10 1 325 2.1E-113 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 GYO_1313 005fb9068bebfe7b03e5aa028e529794 325 TIGRFAM TIGR00747 fabH: 3-oxoacyl-[acyl-carrier-protein] synthase III 3 323 5.0E-101 T 14-10-2018 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 GYO_1313 005fb9068bebfe7b03e5aa028e529794 325 Hamap MF_01815 3-oxoacyl-[acyl-carrier-protein] synthase 3 [fabH]. 2 323 62.214 T 14-10-2018 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 GYO_3073 869ff894580df61ed47ded31f4685af2 499 Pfam PF00682 HMGL-like 2 253 9.1E-87 T 14-10-2018 IPR000891 Pyruvate carboxyltransferase GO:0003824 GYO_3073 869ff894580df61ed47ded31f4685af2 499 Pfam PF08502 LeuA allosteric (dimerisation) domain 349 481 6.8E-35 T 14-10-2018 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 GYO_3073 869ff894580df61ed47ded31f4685af2 499 Gene3D G3DSA:1.10.238.260 260 371 9.0E-37 T 14-10-2018 GYO_3073 869ff894580df61ed47ded31f4685af2 499 ProSitePatterns PS00816 Alpha-isopropylmalate and homocitrate synthases signature 2. 179 192 - T 14-10-2018 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 GYO_3073 869ff894580df61ed47ded31f4685af2 499 Hamap MF_01025 2-isopropylmalate synthase [leuA]. 1 491 39.237 T 14-10-2018 IPR005671 2-isopropylmalate synthase, bacterial-type GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 GYO_3073 869ff894580df61ed47ded31f4685af2 499 SUPERFAMILY SSF51569 2 271 3.48E-88 T 14-10-2018 GYO_3073 869ff894580df61ed47ded31f4685af2 499 SUPERFAMILY SSF110921 377 480 2.62E-19 T 14-10-2018 IPR036230 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain superfamily KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 GYO_3073 869ff894580df61ed47ded31f4685af2 499 Gene3D G3DSA:3.20.20.70 1 256 1.6E-103 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 GYO_3073 869ff894580df61ed47ded31f4685af2 499 SMART SM00917 349 482 5.1E-29 T 14-10-2018 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 GYO_3073 869ff894580df61ed47ded31f4685af2 499 Gene3D G3DSA:3.30.160.270 372 482 1.6E-10 T 14-10-2018 GYO_3073 869ff894580df61ed47ded31f4685af2 499 TIGRFAM TIGR00973 leuA_bact: 2-isopropylmalate synthase 1 479 1.9E-239 T 14-10-2018 IPR005671 2-isopropylmalate synthase, bacterial-type GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 GYO_1088 95523c432c79fc956c213dd087e6f6a8 527 Pfam PF02378 Phosphotransferase system, EIIC 10 345 1.3E-74 T 14-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 GYO_1088 95523c432c79fc956c213dd087e6f6a8 527 Gene3D G3DSA:3.30.1360.60 447 527 4.3E-26 T 14-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 GYO_1088 95523c432c79fc956c213dd087e6f6a8 527 TIGRFAM TIGR00852 pts-Glc: PTS system, maltose and glucose-specific subfamily, IIC component 59 357 9.0E-94 T 14-10-2018 IPR004719 Phosphotransferase system, maltose/glucose-specific subfamily IIC component GO:0008982|GO:0009401|GO:0016021 GYO_1088 95523c432c79fc956c213dd087e6f6a8 527 SUPERFAMILY SSF55604 451 526 7.59E-20 T 14-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 GYO_1088 95523c432c79fc956c213dd087e6f6a8 527 Pfam PF00367 phosphotransferase system, EIIB 456 485 2.3E-15 T 14-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 GYO_1088 95523c432c79fc956c213dd087e6f6a8 527 TIGRFAM TIGR02005 PTS-IIBC-alpha: PTS system, alpha-glucoside-specific IIBC component 2 525 5.0E-265 T 14-10-2018 IPR010975 Phosphotransferase system, alpha-glucoside-specific IIBC component GO:0008982|GO:0009401 GYO_1088 95523c432c79fc956c213dd087e6f6a8 527 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 464 481 - T 14-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 GYO_1088 95523c432c79fc956c213dd087e6f6a8 527 TIGRFAM TIGR00826 EIIB_glc: PTS system, glucose-like IIB component 408 511 1.4E-30 T 14-10-2018 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 GYO_3686 b3c89fe8f7a1d732dd6b4bc693161b93 566 Pfam PF12729 Four helix bundle sensory module for signal transduction 3 181 1.4E-36 T 14-10-2018 IPR024478 Chemotaxis methyl-accepting receptor HlyB-like, 4HB MCP domain GYO_3686 b3c89fe8f7a1d732dd6b4bc693161b93 566 Gene3D G3DSA:1.20.1480.50 167 264 2.3E-14 T 14-10-2018 GYO_3686 b3c89fe8f7a1d732dd6b4bc693161b93 566 SMART SM00304 208 261 3.0E-14 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 GYO_3686 b3c89fe8f7a1d732dd6b4bc693161b93 566 Gene3D G3DSA:1.10.287.950 265 565 3.7E-64 T 14-10-2018 GYO_3686 b3c89fe8f7a1d732dd6b4bc693161b93 566 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 357 519 1.1E-43 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 GYO_3686 b3c89fe8f7a1d732dd6b4bc693161b93 566 Pfam PF00672 HAMP domain 208 258 7.5E-11 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 GYO_3686 b3c89fe8f7a1d732dd6b4bc693161b93 566 SUPERFAMILY SSF58104 228 564 6.15E-69 T 14-10-2018 GYO_3686 b3c89fe8f7a1d732dd6b4bc693161b93 566 SMART SM00283 290 565 3.4E-96 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 GYO_3686 b3c89fe8f7a1d732dd6b4bc693161b93 566 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 417 446 1.3E-18 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 GYO_3686 b3c89fe8f7a1d732dd6b4bc693161b93 566 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 3 28 1.3E-18 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 GYO_3686 b3c89fe8f7a1d732dd6b4bc693161b93 566 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 388 415 1.3E-18 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 GYO_3487 e124d96a30b52b3fd15309f2ea36e131 2379 Pfam PF00501 AMP-binding enzyme 1520 1935 7.7E-109 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 GYO_3487 e124d96a30b52b3fd15309f2ea36e131 2379 Pfam PF00501 AMP-binding enzyme 464 861 3.8E-109 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 GYO_3487 e124d96a30b52b3fd15309f2ea36e131 2379 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 1541 1959 2.0E-140 T 14-10-2018 IPR010071 Amino acid adenylation domain GYO_3487 e124d96a30b52b3fd15309f2ea36e131 2379 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 486 885 9.7E-137 T 14-10-2018 IPR010071 Amino acid adenylation domain GYO_3487 e124d96a30b52b3fd15309f2ea36e131 2379 Pfam PF13193 AMP-binding enzyme C-terminal domain 869 942 1.4E-14 T 14-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain GYO_3487 e124d96a30b52b3fd15309f2ea36e131 2379 Pfam PF13193 AMP-binding enzyme C-terminal domain 1943 2018 2.7E-15 T 14-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain GYO_3487 e124d96a30b52b3fd15309f2ea36e131 2379 SUPERFAMILY SSF56801 428 980 6.67E-169 T 14-10-2018 GYO_3487 e124d96a30b52b3fd15309f2ea36e131 2379 Gene3D G3DSA:3.40.50.12780 455 853 4.2E-141 T 14-10-2018 GYO_3487 e124d96a30b52b3fd15309f2ea36e131 2379 SUPERFAMILY SSF53474 2111 2370 5.97E-57 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold GYO_3487 e124d96a30b52b3fd15309f2ea36e131 2379 Gene3D G3DSA:3.30.559.10 11 207 3.7E-60 T 14-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 GYO_3487 e124d96a30b52b3fd15309f2ea36e131 2379 Gene3D G3DSA:3.40.50.12780 1505 1929 3.1E-150 T 14-10-2018 GYO_3487 e124d96a30b52b3fd15309f2ea36e131 2379 Gene3D G3DSA:3.30.300.30 856 955 8.3E-38 T 14-10-2018 GYO_3487 e124d96a30b52b3fd15309f2ea36e131 2379 SUPERFAMILY SSF52777 1053 1225 5.0E-50 T 14-10-2018 GYO_3487 e124d96a30b52b3fd15309f2ea36e131 2379 SUPERFAMILY SSF52777 1238 1484 1.56E-61 T 14-10-2018 GYO_3487 e124d96a30b52b3fd15309f2ea36e131 2379 Gene3D G3DSA:3.40.50.1820 2034 2376 6.8E-114 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold GYO_3487 e124d96a30b52b3fd15309f2ea36e131 2379 Gene3D G3DSA:3.30.300.30 1930 2033 8.2E-39 T 14-10-2018 GYO_3487 e124d96a30b52b3fd15309f2ea36e131 2379 Gene3D G3DSA:3.30.559.30 208 432 3.4E-65 T 14-10-2018 GYO_3487 e124d96a30b52b3fd15309f2ea36e131 2379 Pfam PF00668 Condensation domain 8 443 3.6E-73 T 14-10-2018 IPR001242 Condensation domain GYO_3487 e124d96a30b52b3fd15309f2ea36e131 2379 Pfam PF00668 Condensation domain 1050 1500 6.6E-98 T 14-10-2018 IPR001242 Condensation domain GYO_3487 e124d96a30b52b3fd15309f2ea36e131 2379 ProSitePatterns PS00455 Putative AMP-binding domain signature. 1670 1681 - T 14-10-2018 IPR020845 AMP-binding, conserved site GYO_3487 e124d96a30b52b3fd15309f2ea36e131 2379 Gene3D G3DSA:3.30.559.30 1234 1486 1.2E-153 T 14-10-2018 GYO_3487 e124d96a30b52b3fd15309f2ea36e131 2379 SUPERFAMILY SSF47336 962 1033 4.32E-20 T 14-10-2018 IPR036736 ACP-like superfamily GYO_3487 e124d96a30b52b3fd15309f2ea36e131 2379 SUPERFAMILY SSF52777 11 185 2.0E-36 T 14-10-2018 GYO_3487 e124d96a30b52b3fd15309f2ea36e131 2379 SUPERFAMILY SSF56801 1481 2056 1.83E-172 T 14-10-2018 GYO_3487 e124d96a30b52b3fd15309f2ea36e131 2379 SMART SM00824 Thioesterase 2133 2370 0.0014 T 14-10-2018 IPR020802 Polyketide synthase, thioesterase domain GO:0009058|GO:0016788 GYO_3487 e124d96a30b52b3fd15309f2ea36e131 2379 Pfam PF00550 Phosphopantetheine attachment site 970 1032 3.1E-13 T 14-10-2018 IPR009081 Phosphopantetheine binding ACP domain GYO_3487 e124d96a30b52b3fd15309f2ea36e131 2379 Pfam PF00550 Phosphopantetheine attachment site 2046 2108 6.0E-15 T 14-10-2018 IPR009081 Phosphopantetheine binding ACP domain GYO_3487 e124d96a30b52b3fd15309f2ea36e131 2379 SMART SM00823 Phosphopantetheine attachment site 967 1036 8.8E-7 T 14-10-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 GYO_3487 e124d96a30b52b3fd15309f2ea36e131 2379 SMART SM00823 Phosphopantetheine attachment site 2043 2112 8.7E-9 T 14-10-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 GYO_3487 e124d96a30b52b3fd15309f2ea36e131 2379 Gene3D G3DSA:1.10.1200.10 956 1038 2.0E-28 T 14-10-2018 IPR036736 ACP-like superfamily GYO_3487 e124d96a30b52b3fd15309f2ea36e131 2379 Pfam PF00975 Thioesterase domain 2131 2287 2.3E-30 T 14-10-2018 IPR001031 Thioesterase GO:0009058|GO:0016788 Reactome: R-HSA-75105 GYO_3487 e124d96a30b52b3fd15309f2ea36e131 2379 SUPERFAMILY SSF52777 191 449 8.34E-42 T 14-10-2018 GYO_3487 e124d96a30b52b3fd15309f2ea36e131 2379 ProSitePatterns PS00455 Putative AMP-binding domain signature. 609 620 - T 14-10-2018 IPR020845 AMP-binding, conserved site GYO_3487 e124d96a30b52b3fd15309f2ea36e131 2379 Gene3D G3DSA:3.30.559.10 1052 1424 1.2E-153 T 14-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 GYO_3487 e124d96a30b52b3fd15309f2ea36e131 2379 SUPERFAMILY SSF47336 2037 2108 1.06E-20 T 14-10-2018 IPR036736 ACP-like superfamily GYO_0463 0bbf582ca99be231004a1089e26fd835 583 Gene3D G3DSA:3.60.21.70 166 583 2.9E-190 T 14-10-2018 IPR038607 PhoD-like superfamily GYO_0463 0bbf582ca99be231004a1089e26fd835 583 SUPERFAMILY SSF56300 167 515 9.05E-41 T 14-10-2018 GYO_0463 0bbf582ca99be231004a1089e26fd835 583 Pfam PF16655 PhoD-like phosphatase, N-terminal domain 67 162 3.4E-33 T 14-10-2018 IPR032093 Phospholipase D, N-terminal GYO_0463 0bbf582ca99be231004a1089e26fd835 583 Pfam PF09423 PhoD-like phosphatase 175 512 4.5E-120 T 14-10-2018 IPR018946 Alkaline phosphatase D-related GYO_0463 0bbf582ca99be231004a1089e26fd835 583 Gene3D G3DSA:2.60.40.380 57 165 9.9E-44 T 14-10-2018 IPR008963 Purple acid phosphatase-like, N-terminal GO:0003993|GO:0046872 GYO_3816 9676d4f185cd9640607e226660fa54b2 470 SUPERFAMILY SSF54001 336 467 4.58E-29 T 14-10-2018 IPR038765 Papain-like cysteine peptidase superfamily GYO_3816 9676d4f185cd9640607e226660fa54b2 470 Gene3D G3DSA:3.90.1720.10 254 467 7.0E-37 T 14-10-2018 GYO_3816 9676d4f185cd9640607e226660fa54b2 470 Pfam PF00877 NlpC/P60 family 354 466 3.4E-29 T 14-10-2018 IPR000064 Endopeptidase, NLPC/P60 domain GYO_4049 9fb40c7010831673b264294c33630562 436 SUPERFAMILY SSF55205 2 417 2.22E-141 T 14-10-2018 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta GO:0003824 GYO_4049 9fb40c7010831673b264294c33630562 436 TIGRFAM TIGR01072 murA: UDP-N-acetylglucosamine 1-carboxyvinyltransferase 2 416 2.2E-182 T 14-10-2018 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase GO:0008760|GO:0019277 KEGG: 00520+2.5.1.7|KEGG: 00550+2.5.1.7|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 GYO_4049 9fb40c7010831673b264294c33630562 436 Pfam PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) 7 407 4.8E-123 T 14-10-2018 IPR001986 Enolpyruvate transferase domain GO:0016765 GYO_4049 9fb40c7010831673b264294c33630562 436 Gene3D G3DSA:3.65.10.10 21 231 3.9E-173 T 14-10-2018 IPR036968 Enolpyruvate transferase domain superfamily GO:0016765 GYO_4049 9fb40c7010831673b264294c33630562 436 Gene3D G3DSA:3.65.10.10 7 414 3.9E-173 T 14-10-2018 IPR036968 Enolpyruvate transferase domain superfamily GO:0016765 GYO_4049 9fb40c7010831673b264294c33630562 436 Hamap MF_00111 UDP-N-acetylglucosamine 1-carboxyvinyltransferase [murA]. 1 417 45.551 T 14-10-2018 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase GO:0008760|GO:0019277 KEGG: 00520+2.5.1.7|KEGG: 00550+2.5.1.7|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 GYO_3155 583fcf93eefedacc6bae0fd2b0e10298 280 ProSitePatterns PS00062 Aldo/keto reductase family signature 2. 130 147 - T 14-10-2018 IPR018170 Aldo/keto reductase, conserved site GO:0016491|GO:0055114 GYO_3155 583fcf93eefedacc6bae0fd2b0e10298 280 PIRSF PIRSF000097 2 125 1.1E-36 T 14-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 GYO_3155 583fcf93eefedacc6bae0fd2b0e10298 280 PIRSF PIRSF000097 120 277 1.9E-53 T 14-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 GYO_3155 583fcf93eefedacc6bae0fd2b0e10298 280 SUPERFAMILY SSF51430 9 274 4.98E-92 T 14-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily GYO_3155 583fcf93eefedacc6bae0fd2b0e10298 280 ProSitePatterns PS00063 Aldo/keto reductase family putative active site signature. 234 249 - T 14-10-2018 IPR018170 Aldo/keto reductase, conserved site GO:0016491|GO:0055114 GYO_3155 583fcf93eefedacc6bae0fd2b0e10298 280 PRINTS PR00069 Aldo-keto reductase signature 201 225 6.5E-49 T 14-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 GYO_3155 583fcf93eefedacc6bae0fd2b0e10298 280 PRINTS PR00069 Aldo-keto reductase signature 100 118 6.5E-49 T 14-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 GYO_3155 583fcf93eefedacc6bae0fd2b0e10298 280 PRINTS PR00069 Aldo-keto reductase signature 130 147 6.5E-49 T 14-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 GYO_3155 583fcf93eefedacc6bae0fd2b0e10298 280 PRINTS PR00069 Aldo-keto reductase signature 40 64 6.5E-49 T 14-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 GYO_3155 583fcf93eefedacc6bae0fd2b0e10298 280 PRINTS PR00069 Aldo-keto reductase signature 164 193 6.5E-49 T 14-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 GYO_3155 583fcf93eefedacc6bae0fd2b0e10298 280 Gene3D G3DSA:3.20.20.100 1 280 3.0E-128 T 14-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily GYO_3155 583fcf93eefedacc6bae0fd2b0e10298 280 ProSitePatterns PS00798 Aldo/keto reductase family signature 1. 44 61 - T 14-10-2018 IPR018170 Aldo/keto reductase, conserved site GO:0016491|GO:0055114 GYO_3155 583fcf93eefedacc6bae0fd2b0e10298 280 Pfam PF00248 Aldo/keto reductase family 31 266 3.4E-48 T 14-10-2018 IPR023210 NADP-dependent oxidoreductase domain GYO_0084 9f590ff1fb4aad3886159a2ff485e706 135 Gene3D G3DSA:3.55.30.10 1 78 6.5E-26 T 14-10-2018 IPR016153 Heat shock protein Hsp33, N-terminal GO:0005737|GO:0006457|GO:0051082 GYO_0084 9f590ff1fb4aad3886159a2ff485e706 135 SUPERFAMILY SSF64397 1 83 2.35E-18 T 14-10-2018 IPR016153 Heat shock protein Hsp33, N-terminal GO:0005737|GO:0006457|GO:0051082 GYO_0084 9f590ff1fb4aad3886159a2ff485e706 135 Pfam PF01430 Hsp33 protein 2 122 6.1E-39 T 14-10-2018 IPR000397 Heat shock protein Hsp33 GO:0005737|GO:0006457|GO:0051082 GYO_0084 9f590ff1fb4aad3886159a2ff485e706 135 Gene3D G3DSA:3.90.1280.10 79 135 1.6E-26 T 14-10-2018 IPR016154 Heat shock protein Hsp33, C-terminal GO:0005737|GO:0006457|GO:0051082 GYO_0084 9f590ff1fb4aad3886159a2ff485e706 135 SUPERFAMILY SSF118352 73 131 8.24E-23 T 14-10-2018 IPR016154 Heat shock protein Hsp33, C-terminal GO:0005737|GO:0006457|GO:0051082 GYO_2027 c165ba26353822d01a01eb80f9cab908 409 ProSitePatterns PS00143 Insulinase family, zinc-binding region signature. 33 56 - T 14-10-2018 IPR001431 Peptidase M16, zinc-binding site GO:0004222|GO:0006508 GYO_2027 c165ba26353822d01a01eb80f9cab908 409 SUPERFAMILY SSF63411 3 204 1.07E-62 T 14-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 GYO_2027 c165ba26353822d01a01eb80f9cab908 409 Gene3D G3DSA:3.30.830.10 1 213 5.0E-82 T 14-10-2018 GYO_2027 c165ba26353822d01a01eb80f9cab908 409 Pfam PF05193 Peptidase M16 inactive domain 166 338 4.1E-39 T 14-10-2018 IPR007863 Peptidase M16, C-terminal GYO_2027 c165ba26353822d01a01eb80f9cab908 409 SUPERFAMILY SSF63411 227 401 5.9E-46 T 14-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 GYO_2027 c165ba26353822d01a01eb80f9cab908 409 Pfam PF00675 Insulinase (Peptidase family M16) 12 159 3.7E-51 T 14-10-2018 IPR011765 Peptidase M16, N-terminal GYO_2027 c165ba26353822d01a01eb80f9cab908 409 Gene3D G3DSA:3.30.830.10 218 409 1.1E-55 T 14-10-2018 GYO_0829 95e444a6840bbd1d9c6bc7896cf4e7e6 420 SUPERFAMILY SSF54106 2 46 1.7E-10 T 14-10-2018 GYO_0829 95e444a6840bbd1d9c6bc7896cf4e7e6 420 SUPERFAMILY SSF51445 113 417 1.33E-45 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily GYO_0829 95e444a6840bbd1d9c6bc7896cf4e7e6 420 Gene3D G3DSA:3.10.350.10 2 46 4.9E-13 T 14-10-2018 IPR036779 LysM domain superfamily GYO_0829 95e444a6840bbd1d9c6bc7896cf4e7e6 420 Gene3D G3DSA:3.10.50.10 318 374 4.4E-113 T 14-10-2018 IPR029070 Chitinase insertion domain superfamily GYO_0829 95e444a6840bbd1d9c6bc7896cf4e7e6 420 Pfam PF00704 Glycosyl hydrolases family 18 177 400 4.8E-29 T 14-10-2018 IPR001223 Glycoside hydrolase family 18, catalytic domain GO:0005975 GYO_0829 95e444a6840bbd1d9c6bc7896cf4e7e6 420 Gene3D G3DSA:3.20.20.80 129 400 4.4E-113 T 14-10-2018 GYO_0829 95e444a6840bbd1d9c6bc7896cf4e7e6 420 SMART SM00257 3 46 1.2E-12 T 14-10-2018 IPR018392 LysM domain GYO_0829 95e444a6840bbd1d9c6bc7896cf4e7e6 420 SMART SM00257 49 93 4.9E-15 T 14-10-2018 IPR018392 LysM domain GYO_0829 95e444a6840bbd1d9c6bc7896cf4e7e6 420 Gene3D G3DSA:3.10.350.10 48 93 3.8E-15 T 14-10-2018 IPR036779 LysM domain superfamily GYO_0829 95e444a6840bbd1d9c6bc7896cf4e7e6 420 SMART SM00636 93 403 1.1E-29 T 14-10-2018 IPR011583 Chitinase II GO:0008061 GYO_0829 95e444a6840bbd1d9c6bc7896cf4e7e6 420 Pfam PF01476 LysM domain 4 46 3.3E-10 T 14-10-2018 IPR018392 LysM domain GYO_0829 95e444a6840bbd1d9c6bc7896cf4e7e6 420 Pfam PF01476 LysM domain 50 93 3.8E-11 T 14-10-2018 IPR018392 LysM domain GYO_0829 95e444a6840bbd1d9c6bc7896cf4e7e6 420 SUPERFAMILY SSF54106 48 93 1.57E-8 T 14-10-2018 GYO_2939 63c6d7f760594840456feb8e13dc3379 269 TIGRFAM TIGR00822 EII-Sor: PTS system, mannose/fructose/sorbose family, IIC component 1 267 1.9E-127 T 14-10-2018 IPR004700 Phosphotransferase system, mannose/fructose/sorbose family, IIC subunit GO:0009401|GO:0016021 GYO_2939 63c6d7f760594840456feb8e13dc3379 269 Pfam PF03609 PTS system sorbose-specific iic component 4 234 3.3E-70 T 14-10-2018 IPR004700 Phosphotransferase system, mannose/fructose/sorbose family, IIC subunit GO:0009401|GO:0016021 GYO_4117 d63686e7b3381882ad516c9c30d91d09 448 TIGRFAM TIGR04085 rSAM_more_4Fe4S: radical SAM additional 4Fe4S-binding SPASM domain 344 429 5.6E-10 T 14-10-2018 IPR023885 4Fe4S-binding SPASM domain GYO_4117 d63686e7b3381882ad516c9c30d91d09 448 Gene3D G3DSA:3.20.20.70 118 411 7.5E-51 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 GYO_4117 d63686e7b3381882ad516c9c30d91d09 448 Pfam PF13186 Iron-sulfur cluster-binding domain 344 408 6.7E-9 T 14-10-2018 IPR023885 4Fe4S-binding SPASM domain GYO_4117 d63686e7b3381882ad516c9c30d91d09 448 PIRSF PIRSF037420 103 331 1.7E-36 T 14-10-2018 IPR017200 Coenzyme PQQ synthesis protein E GYO_4117 d63686e7b3381882ad516c9c30d91d09 448 PIRSF PIRSF037420 334 444 0.038 T 14-10-2018 IPR017200 Coenzyme PQQ synthesis protein E GYO_4117 d63686e7b3381882ad516c9c30d91d09 448 SMART SM00729 119 317 0.0017 T 14-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 GYO_4117 d63686e7b3381882ad516c9c30d91d09 448 Pfam PF05402 Coenzyme PQQ synthesis protein D (PqqD) 40 96 2.4E-6 T 14-10-2018 IPR008792 Coenzyme PQQ synthesis D GYO_4117 d63686e7b3381882ad516c9c30d91d09 448 Pfam PF04055 Radical SAM superfamily 124 278 2.1E-21 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 GYO_4117 d63686e7b3381882ad516c9c30d91d09 448 SUPERFAMILY SSF102114 118 416 9.42E-59 T 14-10-2018 GYO_3679 758ea2aa7b9c61b4a4906d7c097948e8 246 PIRSF PIRSF017388 1 246 4.5E-100 T 14-10-2018 IPR012354 Esterase/lipase GO:0052689 GYO_3679 758ea2aa7b9c61b4a4906d7c097948e8 246 SUPERFAMILY SSF53474 6 244 6.67E-36 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold GYO_3679 758ea2aa7b9c61b4a4906d7c097948e8 246 Gene3D G3DSA:3.40.50.1820 1 246 2.7E-61 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold GYO_3679 758ea2aa7b9c61b4a4906d7c097948e8 246 Pfam PF12146 Serine aminopeptidase, S33 16 229 2.5E-17 T 14-10-2018 IPR022742 Serine aminopeptidase, S33 GYO_0539 7a488410e93da1e758f5a1ff1ed7c22c 771 Pfam PF04324 BFD-like [2Fe-2S] binding domain 412 461 1.6E-15 T 14-10-2018 IPR007419 BFD-like [2Fe-2S]-binding domain GYO_0539 7a488410e93da1e758f5a1ff1ed7c22c 771 Pfam PF04324 BFD-like [2Fe-2S] binding domain 478 527 3.2E-9 T 14-10-2018 IPR007419 BFD-like [2Fe-2S]-binding domain GYO_0539 7a488410e93da1e758f5a1ff1ed7c22c 771 Gene3D G3DSA:3.50.50.60 110 244 4.9E-89 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily GYO_0539 7a488410e93da1e758f5a1ff1ed7c22c 771 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 6 280 1.5E-53 T 14-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 GYO_0539 7a488410e93da1e758f5a1ff1ed7c22c 771 SUPERFAMILY SSF51905 147 305 2.71E-27 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily GYO_0539 7a488410e93da1e758f5a1ff1ed7c22c 771 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 233 247 3.8E-11 T 14-10-2018 GYO_0539 7a488410e93da1e758f5a1ff1ed7c22c 771 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 272 279 3.8E-11 T 14-10-2018 GYO_0539 7a488410e93da1e758f5a1ff1ed7c22c 771 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 5 27 3.8E-11 T 14-10-2018 GYO_0539 7a488410e93da1e758f5a1ff1ed7c22c 771 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 147 172 3.8E-11 T 14-10-2018 GYO_0539 7a488410e93da1e758f5a1ff1ed7c22c 771 SUPERFAMILY SSF51905 2 192 2.25E-41 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily GYO_0539 7a488410e93da1e758f5a1ff1ed7c22c 771 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 257 279 7.7E-21 T 14-10-2018 GYO_0539 7a488410e93da1e758f5a1ff1ed7c22c 771 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 6 25 7.7E-21 T 14-10-2018 GYO_0539 7a488410e93da1e758f5a1ff1ed7c22c 771 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 147 165 7.7E-21 T 14-10-2018 GYO_0539 7a488410e93da1e758f5a1ff1ed7c22c 771 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 232 248 7.7E-21 T 14-10-2018 GYO_0539 7a488410e93da1e758f5a1ff1ed7c22c 771 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 102 120 7.7E-21 T 14-10-2018 GYO_0539 7a488410e93da1e758f5a1ff1ed7c22c 771 Gene3D G3DSA:1.10.10.1100 412 466 5.7E-11 T 14-10-2018 GYO_0539 7a488410e93da1e758f5a1ff1ed7c22c 771 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 543 601 4.3E-11 T 14-10-2018 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 GYO_0539 7a488410e93da1e758f5a1ff1ed7c22c 771 Gene3D G3DSA:3.50.50.60 7 280 4.9E-89 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily GYO_0539 7a488410e93da1e758f5a1ff1ed7c22c 771 Gene3D G3DSA:3.30.390.30 316 390 8.6E-6 T 14-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 GYO_0539 7a488410e93da1e758f5a1ff1ed7c22c 771 SUPERFAMILY SSF56014 628 744 6.8E-18 T 14-10-2018 GYO_0539 7a488410e93da1e758f5a1ff1ed7c22c 771 PIRSF PIRSF037149 1 768 4.3E-277 T 14-10-2018 IPR017121 Nitrite reductase [NAD(P)H], large subunit GO:0042128 GYO_0539 7a488410e93da1e758f5a1ff1ed7c22c 771 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 628 745 1.2E-9 T 14-10-2018 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 GYO_0539 7a488410e93da1e758f5a1ff1ed7c22c 771 SUPERFAMILY SSF55124 496 600 1.54E-19 T 14-10-2018 IPR036136 Nitrite/Sulfite reductase ferredoxin-like domain superfamily GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 GYO_0539 7a488410e93da1e758f5a1ff1ed7c22c 771 TIGRFAM TIGR02374 nitri_red_nirB: nitrite reductase [NAD(P)H], large subunit 6 767 0.0 T 14-10-2018 IPR012744 Nitrite reductase [NAD(P)H] large subunit, NirB GO:0008942|GO:0042128|GO:0050660|GO:0050661|GO:0055114 GYO_0539 7a488410e93da1e758f5a1ff1ed7c22c 771 Gene3D G3DSA:3.30.413.10 611 756 1.0E-15 T 14-10-2018 GYO_0155 74be2f7d785ba7e3f49c9ced117aa06d 61 ProSitePatterns PS00527 Ribosomal protein S14 signature. 23 45 - T 14-10-2018 IPR018271 Ribosomal protein S14, conserved site GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 GYO_0155 74be2f7d785ba7e3f49c9ced117aa06d 61 Pfam PF00253 Ribosomal protein S14p/S29e 9 60 1.3E-25 T 14-10-2018 IPR001209 Ribosomal protein S14 GO:0003735|GO:0005622|GO:0005840|GO:0006412 GYO_0155 74be2f7d785ba7e3f49c9ced117aa06d 61 Gene3D G3DSA:4.10.830.10 1 61 1.8E-30 T 14-10-2018 GYO_0155 74be2f7d785ba7e3f49c9ced117aa06d 61 Hamap MF_01364_B 30S ribosomal protein S14 type Z [rpsZ]. 1 61 25.948 T 14-10-2018 IPR023053 Ribosomal protein S14, type Z GYO_0155 74be2f7d785ba7e3f49c9ced117aa06d 61 SUPERFAMILY SSF57716 3 61 6.99E-22 T 14-10-2018 GYO_2607 476bd1f978ee11f364d2cbd9ef123c08 343 Gene3D G3DSA:3.40.630.30 16 140 6.7E-19 T 14-10-2018 GYO_2607 476bd1f978ee11f364d2cbd9ef123c08 343 Pfam PF04229 GrpB protein 153 312 7.0E-55 T 14-10-2018 IPR007344 GrpB/Dephospho-CoA kinase GYO_2607 476bd1f978ee11f364d2cbd9ef123c08 343 SUPERFAMILY SSF55729 41 135 1.32E-18 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase GYO_2607 476bd1f978ee11f364d2cbd9ef123c08 343 Gene3D G3DSA:3.30.460.10 150 319 6.5E-61 T 14-10-2018 GYO_2607 476bd1f978ee11f364d2cbd9ef123c08 343 SUPERFAMILY SSF81301 156 318 8.83E-55 T 14-10-2018 GYO_2607 476bd1f978ee11f364d2cbd9ef123c08 343 Pfam PF13673 Acetyltransferase (GNAT) domain 41 141 8.3E-17 T 14-10-2018 IPR000182 GNAT domain GYO_3025 8ae41939e2216b01fb43d339af20852e 368 Gene3D G3DSA:3.40.50.10800 30 348 5.6E-83 T 14-10-2018 GYO_3025 8ae41939e2216b01fb43d339af20852e 368 Gene3D G3DSA:3.40.50.10800 112 365 5.6E-83 T 14-10-2018 GYO_3025 8ae41939e2216b01fb43d339af20852e 368 Hamap MF_00569 Quinolinate synthase A [nadA]. 22 367 58.064 T 14-10-2018 IPR023515 Quinolinate synthase A, type 3 GO:0016765 MetaCyc: PWY-5316|MetaCyc: PWY-7342 GYO_3025 8ae41939e2216b01fb43d339af20852e 368 Pfam PF02445 Quinolinate synthetase A protein 29 365 6.3E-107 T 14-10-2018 IPR003473 Quinolinate synthetase A GO:0008987|GO:0009435|GO:0051539 MetaCyc: PWY-5316|MetaCyc: PWY-7342 GYO_3025 8ae41939e2216b01fb43d339af20852e 368 Gene3D G3DSA:3.40.50.10800 230 318 5.6E-83 T 14-10-2018 GYO_3025 8ae41939e2216b01fb43d339af20852e 368 TIGRFAM TIGR00550 nadA: quinolinate synthetase complex, A subunit 21 368 1.2E-133 T 14-10-2018 IPR003473 Quinolinate synthetase A GO:0008987|GO:0009435|GO:0051539 MetaCyc: PWY-5316|MetaCyc: PWY-7342 GYO_3025 8ae41939e2216b01fb43d339af20852e 368 SUPERFAMILY SSF142754 32 366 5.89E-97 T 14-10-2018 IPR036094 Quinolinate synthetase A superfamily GO:0008987|GO:0009435|GO:0051539 MetaCyc: PWY-5316|MetaCyc: PWY-7342 GYO_0986 c3f991cf73cba0e0f8399b1c3ead2b58 1061 PIRSF PIRSF000209 1 1061 0.0 T 14-10-2018 IPR023206 Bifunctional cytochrome P450/NADPH--cytochrome P450 reductase GO:0003958|GO:0055114|GO:0070330 KEGG: 00071+1.14.14.1|KEGG: 00140+1.14.14.1|KEGG: 00232+1.14.14.1|KEGG: 00380+1.14.14.1|KEGG: 00590+1.14.14.1|KEGG: 00591+1.14.14.1|KEGG: 00627+1.14.14.1|KEGG: 00830+1.14.14.1|KEGG: 00980+1.14.14.1|KEGG: 00982+1.14.14.1|MetaCyc: PWY-5451|MetaCyc: PWY-5665|MetaCyc: PWY-6398|MetaCyc: PWY-6992|MetaCyc: PWY-7466|MetaCyc: PWY-7826 GYO_0986 c3f991cf73cba0e0f8399b1c3ead2b58 1061 Pfam PF00258 Flavodoxin 495 627 8.0E-27 T 14-10-2018 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 GYO_0986 c3f991cf73cba0e0f8399b1c3ead2b58 1061 Pfam PF00175 Oxidoreductase NAD-binding domain 913 1021 2.1E-17 T 14-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 GYO_0986 c3f991cf73cba0e0f8399b1c3ead2b58 1061 SUPERFAMILY SSF63380 675 896 3.0E-64 T 14-10-2018 IPR017938 Riboflavin synthase-like beta-barrel GYO_0986 c3f991cf73cba0e0f8399b1c3ead2b58 1061 Gene3D G3DSA:2.40.30.10 681 890 3.3E-71 T 14-10-2018 GYO_0986 c3f991cf73cba0e0f8399b1c3ead2b58 1061 Pfam PF00067 Cytochrome P450 15 447 4.4E-84 T 14-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 GYO_0986 c3f991cf73cba0e0f8399b1c3ead2b58 1061 PRINTS PR00369 Flavodoxin signature 597 616 1.7E-10 T 14-10-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 GYO_0986 c3f991cf73cba0e0f8399b1c3ead2b58 1061 PRINTS PR00369 Flavodoxin signature 494 507 1.7E-10 T 14-10-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 GYO_0986 c3f991cf73cba0e0f8399b1c3ead2b58 1061 PRINTS PR00369 Flavodoxin signature 572 582 1.7E-10 T 14-10-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 GYO_0986 c3f991cf73cba0e0f8399b1c3ead2b58 1061 Gene3D G3DSA:3.40.50.360 490 641 6.5E-45 T 14-10-2018 IPR029039 Flavoprotein-like superfamily GYO_0986 c3f991cf73cba0e0f8399b1c3ead2b58 1061 Gene3D G3DSA:1.10.630.10 4 472 1.8E-165 T 14-10-2018 IPR036396 Cytochrome P450 superfamily GO:0005506|GO:0016705|GO:0020037|GO:0055114 GYO_0986 c3f991cf73cba0e0f8399b1c3ead2b58 1061 SUPERFAMILY SSF52343 901 1058 1.44E-45 T 14-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain GYO_0986 c3f991cf73cba0e0f8399b1c3ead2b58 1061 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 875 884 6.8E-32 T 14-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 GYO_0986 c3f991cf73cba0e0f8399b1c3ead2b58 1061 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 840 847 6.8E-32 T 14-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 GYO_0986 c3f991cf73cba0e0f8399b1c3ead2b58 1061 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 1007 1015 6.8E-32 T 14-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 GYO_0986 c3f991cf73cba0e0f8399b1c3ead2b58 1061 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 912 931 6.8E-32 T 14-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 GYO_0986 c3f991cf73cba0e0f8399b1c3ead2b58 1061 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 706 716 6.8E-32 T 14-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 GYO_0986 c3f991cf73cba0e0f8399b1c3ead2b58 1061 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 941 950 6.8E-32 T 14-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 GYO_0986 c3f991cf73cba0e0f8399b1c3ead2b58 1061 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 984 1000 6.8E-32 T 14-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 GYO_0986 c3f991cf73cba0e0f8399b1c3ead2b58 1061 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 953 964 6.8E-32 T 14-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 GYO_0986 c3f991cf73cba0e0f8399b1c3ead2b58 1061 SUPERFAMILY SSF48264 5 454 1.57E-108 T 14-10-2018 IPR036396 Cytochrome P450 superfamily GO:0005506|GO:0016705|GO:0020037|GO:0055114 GYO_0986 c3f991cf73cba0e0f8399b1c3ead2b58 1061 Gene3D G3DSA:1.20.990.10 716 838 3.3E-71 T 14-10-2018 IPR023173 NADPH-cytochrome p450 reductase, FAD-binding, alpha-helical domain superfamily GO:0016491|GO:0055114 GYO_0986 c3f991cf73cba0e0f8399b1c3ead2b58 1061 Pfam PF00667 FAD binding domain 674 880 5.2E-38 T 14-10-2018 IPR003097 Sulfite reductase [NADPH] flavoprotein alpha-component-like, FAD-binding GO:0016491|GO:0055114 GYO_0986 c3f991cf73cba0e0f8399b1c3ead2b58 1061 ProSitePatterns PS00086 Cytochrome P450 cysteine heme-iron ligand signature. 396 405 - T 14-10-2018 IPR017972 Cytochrome P450, conserved site GO:0016705|GO:0055114 GYO_0986 c3f991cf73cba0e0f8399b1c3ead2b58 1061 Gene3D G3DSA:3.40.50.80 901 1060 1.0E-56 T 14-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain GYO_0986 c3f991cf73cba0e0f8399b1c3ead2b58 1061 SUPERFAMILY SSF52218 489 645 6.78E-43 T 14-10-2018 IPR029039 Flavoprotein-like superfamily GYO_1523 1e0605d06fcd0b818d49a73b26e05ec4 985 SMART SM00929 84 125 1.8E-7 T 14-10-2018 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 GYO_1523 1e0605d06fcd0b818d49a73b26e05ec4 985 Gene3D G3DSA:3.40.228.10 393 592 2.9E-171 T 14-10-2018 GYO_1523 1e0605d06fcd0b818d49a73b26e05ec4 985 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 191 202 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site GYO_1523 1e0605d06fcd0b818d49a73b26e05ec4 985 SUPERFAMILY SSF53706 252 777 3.53E-199 T 14-10-2018 GYO_1523 1e0605d06fcd0b818d49a73b26e05ec4 985 SMART SM00926 258 312 3.4E-17 T 14-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 GYO_1523 1e0605d06fcd0b818d49a73b26e05ec4 985 Pfam PF12838 4Fe-4S dicluster domain 147 205 3.0E-6 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain GYO_1523 1e0605d06fcd0b818d49a73b26e05ec4 985 Gene3D G3DSA:2.20.25.90 258 313 1.5E-19 T 14-10-2018 GYO_1523 1e0605d06fcd0b818d49a73b26e05ec4 985 Gene3D G3DSA:3.40.50.740 320 781 2.9E-171 T 14-10-2018 GYO_1523 1e0605d06fcd0b818d49a73b26e05ec4 985 Gene3D G3DSA:3.10.20.740 4 125 6.8E-26 T 14-10-2018 GYO_1523 1e0605d06fcd0b818d49a73b26e05ec4 985 SUPERFAMILY SSF50692 795 933 8.08E-35 T 14-10-2018 IPR009010 Aspartate decarboxylase-like domain superfamily GYO_1523 1e0605d06fcd0b818d49a73b26e05ec4 985 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 258 312 5.3E-18 T 14-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 GYO_1523 1e0605d06fcd0b818d49a73b26e05ec4 985 PIRSF PIRSF036643 1 965 0.0 T 14-10-2018 GYO_1523 1e0605d06fcd0b818d49a73b26e05ec4 985 Gene3D G3DSA:3.30.70.20 126 209 4.2E-21 T 14-10-2018 GYO_1523 1e0605d06fcd0b818d49a73b26e05ec4 985 Pfam PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region 88 123 6.6E-8 T 14-10-2018 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 GYO_1523 1e0605d06fcd0b818d49a73b26e05ec4 985 TIGRFAM TIGR01591 Fdh-alpha: formate dehydrogenase, alpha subunit 263 931 1.7E-258 T 14-10-2018 IPR006478 Formate dehydrogenase, alpha subunit GO:0008863|GO:0015942|GO:0055114 KEGG: 00630+1.17.1.9|KEGG: 00680+1.17.1.9|MetaCyc: PWY-1881|MetaCyc: PWY-5497|MetaCyc: PWY-6696|MetaCyc: PWY-7985 GYO_1523 1e0605d06fcd0b818d49a73b26e05ec4 985 SUPERFAMILY SSF54862 77 211 2.51E-29 T 14-10-2018 GYO_1523 1e0605d06fcd0b818d49a73b26e05ec4 985 SUPERFAMILY SSF54292 6 74 5.45E-12 T 14-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 GYO_1523 1e0605d06fcd0b818d49a73b26e05ec4 985 Pfam PF01568 Molydopterin dinucleotide binding domain 823 928 3.7E-21 T 14-10-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0043546|GO:0055114 GYO_1523 1e0605d06fcd0b818d49a73b26e05ec4 985 Pfam PF00384 Molybdopterin oxidoreductase 315 739 7.3E-80 T 14-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 GYO_1523 1e0605d06fcd0b818d49a73b26e05ec4 985 Pfam PF13510 2Fe-2S iron-sulfur cluster binding domain 6 76 8.1E-10 T 14-10-2018 GYO_1523 1e0605d06fcd0b818d49a73b26e05ec4 985 Gene3D G3DSA:2.40.40.20 811 938 4.1E-28 T 14-10-2018 GYO_0096 58db66938c67c8e96c757aa76a070e5b 499 TIGRFAM TIGR00499 lysS_bact: lysine--tRNA ligase 10 498 8.1E-236 T 14-10-2018 IPR002313 Lysine-tRNA ligase, class II GO:0004824|GO:0005524|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 GYO_0096 58db66938c67c8e96c757aa76a070e5b 499 PRINTS PR00982 Lysyl-tRNA synthetase signature 211 227 4.0E-40 T 14-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 GYO_0096 58db66938c67c8e96c757aa76a070e5b 499 PRINTS PR00982 Lysyl-tRNA synthetase signature 240 253 4.0E-40 T 14-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 GYO_0096 58db66938c67c8e96c757aa76a070e5b 499 PRINTS PR00982 Lysyl-tRNA synthetase signature 258 275 4.0E-40 T 14-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 GYO_0096 58db66938c67c8e96c757aa76a070e5b 499 PRINTS PR00982 Lysyl-tRNA synthetase signature 195 205 4.0E-40 T 14-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 GYO_0096 58db66938c67c8e96c757aa76a070e5b 499 PRINTS PR00982 Lysyl-tRNA synthetase signature 381 397 4.0E-40 T 14-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 GYO_0096 58db66938c67c8e96c757aa76a070e5b 499 Hamap MF_00252 Lysine--tRNA ligase [lysS]. 17 499 46.676 T 14-10-2018 IPR002313 Lysine-tRNA ligase, class II GO:0004824|GO:0005524|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 GYO_0096 58db66938c67c8e96c757aa76a070e5b 499 Pfam PF00152 tRNA synthetases class II (D, K and N) 159 496 8.8E-84 T 14-10-2018 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 GYO_0096 58db66938c67c8e96c757aa76a070e5b 499 Pfam PF01336 OB-fold nucleic acid binding domain 65 142 3.2E-15 T 14-10-2018 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 GYO_0096 58db66938c67c8e96c757aa76a070e5b 499 Gene3D G3DSA:2.40.50.140 11 151 4.2E-47 T 14-10-2018 GYO_0096 58db66938c67c8e96c757aa76a070e5b 499 SUPERFAMILY SSF50249 10 151 8.78E-46 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold GYO_0096 58db66938c67c8e96c757aa76a070e5b 499 SUPERFAMILY SSF55681 158 497 1.81E-125 T 14-10-2018 GYO_0096 58db66938c67c8e96c757aa76a070e5b 499 PIRSF PIRSF039101 1 499 9.7E-204 T 14-10-2018 IPR034762 Bacterial/eukaryotic lysine-tRNA ligase, class II GO:0004824|GO:0005524|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 GYO_0096 58db66938c67c8e96c757aa76a070e5b 499 Gene3D G3DSA:3.30.930.10 152 496 8.7E-141 T 14-10-2018 GYO_2106 209dc2feb05bb022d276b1707adbb00f 444 ProSitePatterns PS00180 Glutamine synthetase signature 1. 52 70 - T 14-10-2018 IPR027302 Glutamine synthetase, N-terminal conserved site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964|Reactome: R-HSA-210455|Reactome: R-HSA-70614 GYO_2106 209dc2feb05bb022d276b1707adbb00f 444 ProSitePatterns PS00182 Glutamine synthetase class-I adenylation site. 361 373 - T 14-10-2018 IPR001637 Glutamine synthetase class-I, adenylation site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 GYO_2106 209dc2feb05bb022d276b1707adbb00f 444 Gene3D G3DSA:3.30.590.10 108 444 8.3E-150 T 14-10-2018 GYO_2106 209dc2feb05bb022d276b1707adbb00f 444 SUPERFAMILY SSF55931 105 442 1.18E-129 T 14-10-2018 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 GYO_2106 209dc2feb05bb022d276b1707adbb00f 444 SMART SM01230 105 354 8.4E-140 T 14-10-2018 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 GYO_2106 209dc2feb05bb022d276b1707adbb00f 444 Pfam PF03951 Glutamine synthetase, beta-Grasp domain 17 99 4.6E-34 T 14-10-2018 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964|Reactome: R-HSA-210455|Reactome: R-HSA-70614 GYO_2106 209dc2feb05bb022d276b1707adbb00f 444 SUPERFAMILY SSF54368 5 104 9.42E-37 T 14-10-2018 IPR036651 Glutamine synthetase, N-terminal domain superfamily GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 GYO_2106 209dc2feb05bb022d276b1707adbb00f 444 Gene3D G3DSA:3.10.20.70 2 107 1.3E-47 T 14-10-2018 IPR036651 Glutamine synthetase, N-terminal domain superfamily GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 GYO_2106 209dc2feb05bb022d276b1707adbb00f 444 ProSitePatterns PS00181 Glutamine synthetase putative ATP-binding region signature. 234 249 - T 14-10-2018 IPR027303 Glutamine synthetase, glycine-rich site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964|Reactome: R-HSA-210455|Reactome: R-HSA-70614 GYO_2106 209dc2feb05bb022d276b1707adbb00f 444 Pfam PF00120 Glutamine synthetase, catalytic domain 106 440 1.0E-141 T 14-10-2018 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 GYO_2106 209dc2feb05bb022d276b1707adbb00f 444 TIGRFAM TIGR00653 GlnA: glutamine synthetase, type I 7 441 8.6E-193 T 14-10-2018 IPR004809 Glutamine synthetase type I GO:0004356|GO:0005737|GO:0009399 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 GYO_4250 5296ec848e516ac833397f460db6e546 49 Pfam PF12459 D-Ala-teichoic acid biosynthesis protein 7 49 6.6E-19 T 14-10-2018 IPR021008 Protein of unknown function DUF3687 GYO_1954 317bb95f4cd59c417783af6e001ca9bf 115 TIGRFAM TIGR01024 rplS_bact: ribosomal protein bL19 3 113 8.6E-53 T 14-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 GYO_1954 317bb95f4cd59c417783af6e001ca9bf 115 Pfam PF01245 Ribosomal protein L19 4 112 5.7E-54 T 14-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 GYO_1954 317bb95f4cd59c417783af6e001ca9bf 115 SUPERFAMILY SSF50104 2 114 4.01E-49 T 14-10-2018 IPR008991 Translation protein SH3-like domain superfamily GYO_1954 317bb95f4cd59c417783af6e001ca9bf 115 PRINTS PR00061 Ribosomal protein L19 signature 4 33 9.8E-43 T 14-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 GYO_1954 317bb95f4cd59c417783af6e001ca9bf 115 PRINTS PR00061 Ribosomal protein L19 signature 34 63 9.8E-43 T 14-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 GYO_1954 317bb95f4cd59c417783af6e001ca9bf 115 PRINTS PR00061 Ribosomal protein L19 signature 88 113 9.8E-43 T 14-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 GYO_1954 317bb95f4cd59c417783af6e001ca9bf 115 Hamap MF_00402 50S ribosomal protein L19 [rplS]. 2 114 32.915 T 14-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 GYO_1954 317bb95f4cd59c417783af6e001ca9bf 115 PIRSF PIRSF002191 1 115 4.4E-53 T 14-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 GYO_1954 317bb95f4cd59c417783af6e001ca9bf 115 Gene3D G3DSA:2.30.30.790 2 115 4.4E-15 T 14-10-2018 IPR038657 Ribosomal protein L19 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 GYO_1954 317bb95f4cd59c417783af6e001ca9bf 115 ProSitePatterns PS01015 Ribosomal protein L19 signature. 86 101 - T 14-10-2018 IPR018257 Ribosomal protein L19, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 GYO_2311 bf4473d2970be7273debc2ad87d003f5 107 Pfam PF01022 Bacterial regulatory protein, arsR family 31 77 1.3E-16 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 GYO_2311 bf4473d2970be7273debc2ad87d003f5 107 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 26 41 1.9E-13 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 GYO_2311 bf4473d2970be7273debc2ad87d003f5 107 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 58 73 1.9E-13 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 GYO_2311 bf4473d2970be7273debc2ad87d003f5 107 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 73 88 1.9E-13 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 GYO_2311 bf4473d2970be7273debc2ad87d003f5 107 SMART SM00418 24 102 4.4E-35 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 GYO_2311 bf4473d2970be7273debc2ad87d003f5 107 SUPERFAMILY SSF46785 13 105 3.18E-26 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily GYO_2311 bf4473d2970be7273debc2ad87d003f5 107 Gene3D G3DSA:1.10.10.10 3 107 1.2E-31 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily GYO_2546 a963c47ecb591a735a51e714e814795f 542 Pfam PF05140 ResB-like family 441 519 9.9E-19 T 14-10-2018 IPR007816 ResB-like domain GYO_2546 a963c47ecb591a735a51e714e814795f 542 Pfam PF05140 ResB-like family 63 426 1.5E-77 T 14-10-2018 IPR007816 ResB-like domain GYO_3505 ac9242b42a9cd8cd6808cd20a7e361cf 326 Pfam PF00478 IMP dehydrogenase / GMP reductase domain 6 310 1.1E-69 T 14-10-2018 IPR001093 IMP dehydrogenase/GMP reductase GO:0003824|GO:0055114 GYO_3505 ac9242b42a9cd8cd6808cd20a7e361cf 326 SUPERFAMILY SSF51412 4 315 5.89E-93 T 14-10-2018 GYO_3505 ac9242b42a9cd8cd6808cd20a7e361cf 326 Gene3D G3DSA:3.20.20.70 1 326 3.8E-110 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 GYO_3505 ac9242b42a9cd8cd6808cd20a7e361cf 326 ProSitePatterns PS00487 IMP dehydrogenase / GMP reductase signature. 165 177 - T 14-10-2018 IPR015875 IMP dehydrogenase / GMP reductase, conserved site GO:0016491|GO:0055114 GYO_3505 ac9242b42a9cd8cd6808cd20a7e361cf 326 TIGRFAM TIGR01306 GMP_reduct_2: guanosine monophosphate reductase 4 324 3.2E-209 T 14-10-2018 IPR005994 Guanosine monophosphate reductase, type2 GO:0003920|GO:0006163|GO:1902560 KEGG: 00230+1.7.1.7 GYO_3505 ac9242b42a9cd8cd6808cd20a7e361cf 326 Hamap MF_01511 GMP reductase [guaC]. 2 325 64.802 T 14-10-2018 IPR005994 Guanosine monophosphate reductase, type2 GO:0003920|GO:0006163|GO:1902560 KEGG: 00230+1.7.1.7 GYO_3505 ac9242b42a9cd8cd6808cd20a7e361cf 326 SMART SM01240 3 326 9.7E-116 T 14-10-2018 GYO_3505 ac9242b42a9cd8cd6808cd20a7e361cf 326 PIRSF PIRSF036500 1 326 1.1E-197 T 14-10-2018 IPR005994 Guanosine monophosphate reductase, type2 GO:0003920|GO:0006163|GO:1902560 KEGG: 00230+1.7.1.7 GYO_1389 1ae2a9de260b6024de8419e629dbbf15 287 SUPERFAMILY SSF51215 1 170 7.06E-22 T 14-10-2018 IPR037923 Transcription regulator HTH-like GYO_1389 1ae2a9de260b6024de8419e629dbbf15 287 SUPERFAMILY SSF46689 232 280 1.39E-10 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 GYO_1389 1ae2a9de260b6024de8419e629dbbf15 287 Pfam PF12833 Helix-turn-helix domain 205 280 8.0E-19 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 GYO_1389 1ae2a9de260b6024de8419e629dbbf15 287 SMART SM00342 196 279 1.8E-25 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 GYO_1389 1ae2a9de260b6024de8419e629dbbf15 287 Pfam PF02311 AraC-like ligand binding domain 30 144 2.6E-8 T 14-10-2018 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 GYO_1389 1ae2a9de260b6024de8419e629dbbf15 287 Gene3D G3DSA:1.10.10.60 178 233 2.4E-10 T 14-10-2018 GYO_1389 1ae2a9de260b6024de8419e629dbbf15 287 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 233 275 - T 14-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 GYO_1389 1ae2a9de260b6024de8419e629dbbf15 287 SUPERFAMILY SSF46689 183 230 2.06E-6 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 GYO_1389 1ae2a9de260b6024de8419e629dbbf15 287 Gene3D G3DSA:1.10.10.2730 234 280 9.7E-17 T 14-10-2018 GYO_3938 3285411f16dfaf66328c0e4ee5275032 316 PIRSF PIRSF036894 3 316 1.1E-131 T 14-10-2018 IPR014628 Mannose-6-phosphate isomerase, Firmicutes type, short form GO:0004476|GO:0005975 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882 GYO_3938 3285411f16dfaf66328c0e4ee5275032 316 Gene3D G3DSA:2.60.120.10 1 227 6.4E-96 T 14-10-2018 IPR014710 RmlC-like jelly roll fold GYO_3938 3285411f16dfaf66328c0e4ee5275032 316 TIGRFAM TIGR00218 manA: mannose-6-phosphate isomerase, class I 102 315 8.3E-68 T 14-10-2018 IPR001250 Mannose-6-phosphate isomerase, type I GO:0004476|GO:0005975|GO:0008270 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 GYO_3938 3285411f16dfaf66328c0e4ee5275032 316 TIGRFAM TIGR00218 manA: mannose-6-phosphate isomerase, class I 6 100 2.1E-34 T 14-10-2018 IPR001250 Mannose-6-phosphate isomerase, type I GO:0004476|GO:0005975|GO:0008270 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 GYO_3938 3285411f16dfaf66328c0e4ee5275032 316 SUPERFAMILY SSF51182 3 315 3.99E-106 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily GYO_3938 3285411f16dfaf66328c0e4ee5275032 316 Pfam PF01238 Phosphomannose isomerase type I 7 315 4.1E-81 T 14-10-2018 IPR001250 Mannose-6-phosphate isomerase, type I GO:0004476|GO:0005975|GO:0008270 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 GYO_3938 3285411f16dfaf66328c0e4ee5275032 316 Gene3D G3DSA:2.60.120.10 228 316 2.3E-35 T 14-10-2018 IPR014710 RmlC-like jelly roll fold GYO_3305 67d39c89c0d8aa42758fd995efcc901e 463 Pfam PF00324 Amino acid permease 16 445 2.3E-119 T 14-10-2018 IPR004841 Amino acid permease/ SLC12A domain GO:0016020|GO:0055085 GYO_3305 67d39c89c0d8aa42758fd995efcc901e 463 Gene3D G3DSA:1.20.1740.10 9 461 1.7E-64 T 14-10-2018 GYO_3305 67d39c89c0d8aa42758fd995efcc901e 463 PIRSF PIRSF006060 1 461 7.5E-75 T 14-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 GYO_3718 d89a01411d06bff451f24a04af2b28ba 335 SMART SM00846 3 152 1.3E-98 T 14-10-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 GYO_3718 d89a01411d06bff451f24a04af2b28ba 335 SUPERFAMILY SSF51735 3 168 7.51E-69 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily GYO_3718 d89a01411d06bff451f24a04af2b28ba 335 TIGRFAM TIGR01534 GAPDH-I: glyceraldehyde-3-phosphate dehydrogenase, type I 4 325 1.9E-141 T 14-10-2018 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I GO:0006006|GO:0016620|GO:0050661|GO:0051287|GO:0055114 KEGG: 00010+1.2.1.12|KEGG: 00710+1.2.1.12|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 GYO_3718 d89a01411d06bff451f24a04af2b28ba 335 Pfam PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain 3 102 6.2E-41 T 14-10-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 GYO_3718 d89a01411d06bff451f24a04af2b28ba 335 Gene3D G3DSA:3.40.50.720 4 329 2.4E-161 T 14-10-2018 GYO_3718 d89a01411d06bff451f24a04af2b28ba 335 ProSitePatterns PS00071 Glyceraldehyde 3-phosphate dehydrogenase active site. 150 157 - T 14-10-2018 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 GYO_3718 d89a01411d06bff451f24a04af2b28ba 335 Gene3D G3DSA:3.30.360.10 151 315 2.4E-161 T 14-10-2018 GYO_3718 d89a01411d06bff451f24a04af2b28ba 335 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 269 284 2.0E-42 T 14-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 GYO_3718 d89a01411d06bff451f24a04af2b28ba 335 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 173 189 2.0E-42 T 14-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 GYO_3718 d89a01411d06bff451f24a04af2b28ba 335 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 146 164 2.0E-42 T 14-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 GYO_3718 d89a01411d06bff451f24a04af2b28ba 335 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 229 246 2.0E-42 T 14-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 GYO_3718 d89a01411d06bff451f24a04af2b28ba 335 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 109 122 2.0E-42 T 14-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 GYO_3718 d89a01411d06bff451f24a04af2b28ba 335 SUPERFAMILY SSF55347 152 314 2.77E-74 T 14-10-2018 GYO_3718 d89a01411d06bff451f24a04af2b28ba 335 Pfam PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain 157 313 2.3E-72 T 14-10-2018 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 GYO_3718 d89a01411d06bff451f24a04af2b28ba 335 PIRSF PIRSF000149 1 334 9.2E-143 T 14-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 GYO_1900 8aaa148b1a0dfe450a309475c64e74a7 364 Gene3D G3DSA:3.40.50.880 164 359 1.6E-35 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like GYO_1900 8aaa148b1a0dfe450a309475c64e74a7 364 Hamap MF_01209 Carbamoyl-phosphate synthase small chain [carA]. 1 354 48.715 T 14-10-2018 IPR006274 Carbamoyl-phosphate synthase, small subunit GO:0004088|GO:0006207|GO:0006541 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 GYO_1900 8aaa148b1a0dfe450a309475c64e74a7 364 PRINTS PR00097 Anthranilate synthase component II signature 214 223 1.3E-6 T 14-10-2018 GYO_1900 8aaa148b1a0dfe450a309475c64e74a7 364 PRINTS PR00097 Anthranilate synthase component II signature 241 252 1.3E-6 T 14-10-2018 GYO_1900 8aaa148b1a0dfe450a309475c64e74a7 364 PRINTS PR00097 Anthranilate synthase component II signature 325 338 1.3E-6 T 14-10-2018 GYO_1900 8aaa148b1a0dfe450a309475c64e74a7 364 TIGRFAM TIGR01368 CPSaseIIsmall: carbamoyl-phosphate synthase, small subunit 4 351 1.2E-144 T 14-10-2018 IPR006274 Carbamoyl-phosphate synthase, small subunit GO:0004088|GO:0006207|GO:0006541 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 GYO_1900 8aaa148b1a0dfe450a309475c64e74a7 364 SMART SM01097 1 131 2.2E-87 T 14-10-2018 IPR002474 Carbamoyl-phosphate synthase small subunit, N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 GYO_1900 8aaa148b1a0dfe450a309475c64e74a7 364 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 241 257 8.6E-37 T 14-10-2018 GYO_1900 8aaa148b1a0dfe450a309475c64e74a7 364 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 172 186 8.6E-37 T 14-10-2018 GYO_1900 8aaa148b1a0dfe450a309475c64e74a7 364 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 283 294 8.6E-37 T 14-10-2018 GYO_1900 8aaa148b1a0dfe450a309475c64e74a7 364 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 211 225 8.6E-37 T 14-10-2018 GYO_1900 8aaa148b1a0dfe450a309475c64e74a7 364 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 258 275 8.6E-37 T 14-10-2018 GYO_1900 8aaa148b1a0dfe450a309475c64e74a7 364 Gene3D G3DSA:3.50.30.20 1 147 1.2E-55 T 14-10-2018 IPR036480 Carbamoyl-phosphate synthase small subunit, N-terminal domain superfamily KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 GYO_1900 8aaa148b1a0dfe450a309475c64e74a7 364 PRINTS PR00096 Glutamine amidotransferase superfamily signature 214 223 7.3E-12 T 14-10-2018 GYO_1900 8aaa148b1a0dfe450a309475c64e74a7 364 PRINTS PR00096 Glutamine amidotransferase superfamily signature 325 338 7.3E-12 T 14-10-2018 GYO_1900 8aaa148b1a0dfe450a309475c64e74a7 364 PRINTS PR00096 Glutamine amidotransferase superfamily signature 241 252 7.3E-12 T 14-10-2018 GYO_1900 8aaa148b1a0dfe450a309475c64e74a7 364 SUPERFAMILY SSF52021 1 143 4.45E-57 T 14-10-2018 IPR036480 Carbamoyl-phosphate synthase small subunit, N-terminal domain superfamily KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 GYO_1900 8aaa148b1a0dfe450a309475c64e74a7 364 Pfam PF00117 Glutamine amidotransferase class-I 174 348 3.1E-46 T 14-10-2018 IPR017926 Glutamine amidotransferase GYO_1900 8aaa148b1a0dfe450a309475c64e74a7 364 Pfam PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain 3 129 2.0E-52 T 14-10-2018 IPR002474 Carbamoyl-phosphate synthase small subunit, N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 GYO_1900 8aaa148b1a0dfe450a309475c64e74a7 364 SUPERFAMILY SSF52317 139 351 1.49E-57 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like GYO_4445 c9f2336fc2e58f87902ed2b7299c6b0d 483 SMART SM00388 261 328 9.6E-22 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 GYO_4445 c9f2336fc2e58f87902ed2b7299c6b0d 483 SUPERFAMILY SSF55874 318 481 2.49E-42 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily GYO_4445 c9f2336fc2e58f87902ed2b7299c6b0d 483 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 371 481 8.8E-28 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase GYO_4445 c9f2336fc2e58f87902ed2b7299c6b0d 483 Gene3D G3DSA:3.30.565.10 333 483 1.1E-42 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily GYO_4445 c9f2336fc2e58f87902ed2b7299c6b0d 483 SMART SM00387 370 483 2.3E-38 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase GYO_4445 c9f2336fc2e58f87902ed2b7299c6b0d 483 SUPERFAMILY SSF47384 247 326 4.9E-19 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 GYO_4445 c9f2336fc2e58f87902ed2b7299c6b0d 483 SUPERFAMILY SSF158472 200 248 3.53E-8 T 14-10-2018 GYO_4445 c9f2336fc2e58f87902ed2b7299c6b0d 483 Gene3D G3DSA:1.10.287.130 257 327 2.4E-22 T 14-10-2018 GYO_4445 c9f2336fc2e58f87902ed2b7299c6b0d 483 Pfam PF00512 His Kinase A (phospho-acceptor) domain 263 326 9.1E-18 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 GYO_4445 c9f2336fc2e58f87902ed2b7299c6b0d 483 Gene3D G3DSA:1.20.1480.50 162 256 2.2E-6 T 14-10-2018 GYO_4445 c9f2336fc2e58f87902ed2b7299c6b0d 483 PRINTS PR00344 Bacterial sensor protein C-terminal signature 467 480 2.4E-19 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 GYO_4445 c9f2336fc2e58f87902ed2b7299c6b0d 483 PRINTS PR00344 Bacterial sensor protein C-terminal signature 426 436 2.4E-19 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 GYO_4445 c9f2336fc2e58f87902ed2b7299c6b0d 483 PRINTS PR00344 Bacterial sensor protein C-terminal signature 443 461 2.4E-19 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 GYO_4445 c9f2336fc2e58f87902ed2b7299c6b0d 483 PRINTS PR00344 Bacterial sensor protein C-terminal signature 408 422 2.4E-19 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 GYO_4445 c9f2336fc2e58f87902ed2b7299c6b0d 483 SMART SM00304 200 253 6.1E-8 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 GYO_3127 d19b3378e21903c24c7e676e1065fd9b 269 SUPERFAMILY SSF56784 12 259 8.05E-59 T 14-10-2018 IPR036412 HAD-like superfamily GYO_3127 d19b3378e21903c24c7e676e1065fd9b 269 Pfam PF13344 Haloacid dehalogenase-like hydrolase 13 112 4.3E-24 T 14-10-2018 IPR006357 HAD-superfamily hydrolase, subfamily IIA GYO_3127 d19b3378e21903c24c7e676e1065fd9b 269 TIGRFAM TIGR01460 HAD-SF-IIA: HAD hydrolase, family IIA 13 237 7.5E-39 T 14-10-2018 IPR006357 HAD-superfamily hydrolase, subfamily IIA GYO_3127 d19b3378e21903c24c7e676e1065fd9b 269 Gene3D G3DSA:3.40.50.1000 90 188 1.8E-69 T 14-10-2018 IPR023214 HAD superfamily GYO_3127 d19b3378e21903c24c7e676e1065fd9b 269 Gene3D G3DSA:3.40.50.1000 14 256 1.8E-69 T 14-10-2018 IPR023214 HAD superfamily GYO_3127 d19b3378e21903c24c7e676e1065fd9b 269 Pfam PF13242 HAD-hyrolase-like 188 258 1.6E-17 T 14-10-2018 GYO_2855 80e037aa27a24b775726b814604c6b1b 367 Pfam PF13424 Tetratricopeptide repeat 176 238 3.0E-10 T 14-10-2018 GYO_2855 80e037aa27a24b775726b814604c6b1b 367 SMART SM00028 169 202 230.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 GYO_2855 80e037aa27a24b775726b814604c6b1b 367 SMART SM00028 211 244 1.3E-4 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 GYO_2855 80e037aa27a24b775726b814604c6b1b 367 SMART SM00028 88 121 1.6 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 GYO_2855 80e037aa27a24b775726b814604c6b1b 367 SMART SM00028 250 283 2.8E-4 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 GYO_2855 80e037aa27a24b775726b814604c6b1b 367 SUPERFAMILY SSF48452 170 350 4.7E-19 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 GYO_2855 80e037aa27a24b775726b814604c6b1b 367 SUPERFAMILY SSF48452 87 197 2.28E-11 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 GYO_2855 80e037aa27a24b775726b814604c6b1b 367 Pfam PF13181 Tetratricopeptide repeat 251 278 1.4E-5 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 GYO_2855 80e037aa27a24b775726b814604c6b1b 367 Gene3D G3DSA:1.25.40.10 1 367 6.7E-116 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 GYO_4090 d9e707ed4eaa94829b834c3f5b824259 285 PIRSF PIRSF001359 1 285 3.0E-128 T 14-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 GYO_4090 d9e707ed4eaa94829b834c3f5b824259 285 TIGRFAM TIGR01859 fruc_bis_ald_: fructose-1,6-bisphosphate aldolase, class II 3 285 9.2E-135 T 14-10-2018 IPR011289 Fructose-1,6-bisphosphate aldolase, class 2 GO:0004332|GO:0006096|GO:0008270|GO:0030388 KEGG: 00010+4.1.2.13|KEGG: 00030+4.1.2.13|KEGG: 00051+4.1.2.13|KEGG: 00680+4.1.2.13|KEGG: 00710+4.1.2.13|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7385 GYO_4090 d9e707ed4eaa94829b834c3f5b824259 285 SUPERFAMILY SSF51569 1 285 3.81E-106 T 14-10-2018 GYO_4090 d9e707ed4eaa94829b834c3f5b824259 285 ProSitePatterns PS00602 Fructose-bisphosphate aldolase class-II signature 1. 74 87 - T 14-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 GYO_4090 d9e707ed4eaa94829b834c3f5b824259 285 Gene3D G3DSA:3.20.20.70 1 285 6.1E-115 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 GYO_4090 d9e707ed4eaa94829b834c3f5b824259 285 Pfam PF01116 Fructose-bisphosphate aldolase class-II 4 284 1.9E-105 T 14-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 GYO_4090 d9e707ed4eaa94829b834c3f5b824259 285 ProSitePatterns PS00806 Fructose-bisphosphate aldolase class-II signature 2. 134 145 - T 14-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 GYO_4090 d9e707ed4eaa94829b834c3f5b824259 285 TIGRFAM TIGR00167 cbbA: ketose-bisphosphate aldolase 1 285 4.3E-119 T 14-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 GYO_3509 754c12ba60e0cfa707aa31c3c187dbc3 120 Gene3D G3DSA:2.60.300.12 4 112 2.7E-37 T 14-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 GYO_3509 754c12ba60e0cfa707aa31c3c187dbc3 120 SUPERFAMILY SSF89360 5 98 2.55E-30 T 14-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 GYO_3509 754c12ba60e0cfa707aa31c3c187dbc3 120 Pfam PF01521 Iron-sulphur cluster biosynthesis 5 105 2.5E-21 T 14-10-2018 IPR000361 FeS cluster biogenesis Reactome: R-HSA-1362409 GYO_3509 754c12ba60e0cfa707aa31c3c187dbc3 120 ProSitePatterns PS01152 Hypothetical hesB/yadR/yfhF family signature. 91 108 - T 14-10-2018 IPR017870 FeS cluster insertion, C-terminal, conserved site Reactome: R-HSA-1362409 GYO_3509 754c12ba60e0cfa707aa31c3c187dbc3 120 TIGRFAM TIGR00049 TIGR00049: iron-sulfur cluster assembly accessory protein 5 109 4.9E-39 T 14-10-2018 IPR016092 FeS cluster insertion protein GO:0005198|GO:0051536|GO:0097428 Reactome: R-HSA-1362409 GYO_3867 099382e5a7a78544473dc386fba26506 112 Gene3D G3DSA:1.10.760.10 42 112 1.6E-28 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 GYO_3867 099382e5a7a78544473dc386fba26506 112 PIRSF PIRSF000025 1 112 8.5E-40 T 14-10-2018 IPR012218 Cytochrome c, Bacillus subtilis c550-related GO:0005506|GO:0009055|GO:0016021|GO:0020037 GYO_3867 099382e5a7a78544473dc386fba26506 112 SUPERFAMILY SSF46626 2 109 1.69E-20 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 GYO_3867 099382e5a7a78544473dc386fba26506 112 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 40 108 7.1E-14 T 14-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 GYO_2865 e57a662c6f26cac66056752bd09e87ae 167 SUPERFAMILY SSF46785 2 166 2.4E-22 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily GYO_2865 e57a662c6f26cac66056752bd09e87ae 167 Pfam PF03551 Transcriptional regulator PadR-like family 3 74 5.0E-9 T 14-10-2018 IPR005149 Transcription regulator PadR, N-terminal GYO_2865 e57a662c6f26cac66056752bd09e87ae 167 Gene3D G3DSA:1.10.10.10 1 88 2.8E-12 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily GYO_0637 2ce768bea5f957e8a6313f4baf0889cd 286 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 178 206 - T 14-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 GYO_0637 2ce768bea5f957e8a6313f4baf0889cd 286 SUPERFAMILY SSF51735 41 281 6.42E-81 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily GYO_0637 2ce768bea5f957e8a6313f4baf0889cd 286 Gene3D G3DSA:3.40.50.720 2 284 2.3E-87 T 14-10-2018 GYO_0637 2ce768bea5f957e8a6313f4baf0889cd 286 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 52 281 1.0E-60 T 14-10-2018 GYO_0637 2ce768bea5f957e8a6313f4baf0889cd 286 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 212 229 6.6E-35 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR GYO_0637 2ce768bea5f957e8a6313f4baf0889cd 286 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 119 130 6.6E-35 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR GYO_0637 2ce768bea5f957e8a6313f4baf0889cd 286 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 165 181 6.6E-35 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR GYO_0637 2ce768bea5f957e8a6313f4baf0889cd 286 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 191 210 6.6E-35 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR GYO_0637 2ce768bea5f957e8a6313f4baf0889cd 286 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 246 266 6.6E-35 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR GYO_0637 2ce768bea5f957e8a6313f4baf0889cd 286 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 44 61 6.6E-35 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR GYO_0637 2ce768bea5f957e8a6313f4baf0889cd 286 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 171 179 7.2E-10 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR GYO_0637 2ce768bea5f957e8a6313f4baf0889cd 286 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 191 210 7.2E-10 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR GYO_0637 2ce768bea5f957e8a6313f4baf0889cd 286 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 119 130 7.2E-10 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR GYO_2523 7b06768364577d6c95bf5bf01588a409 450 Pfam PF14620 YpeB sporulation 13 374 1.5E-133 T 14-10-2018 IPR014239 Spore germination YpeB GO:0009847 GYO_2523 7b06768364577d6c95bf5bf01588a409 450 TIGRFAM TIGR02889 spore_YpeB: germination protein YpeB 3 440 4.5E-180 T 14-10-2018 IPR014239 Spore germination YpeB GO:0009847 GYO_2523 7b06768364577d6c95bf5bf01588a409 450 Pfam PF03413 Peptidase propeptide and YPEB domain 378 436 0.0045 T 14-10-2018 IPR025711 PepSY domain GYO_3497 5e6b2dfee89e26c75e3ed73e0f848019 500 Hamap MF_00181 Probable cytosol aminopeptidase [pepA]. 1 494 36.93 T 14-10-2018 IPR023042 Peptidase M17, leucine aminopeptidase KEGG: 00480+3.4.11.1 GYO_3497 5e6b2dfee89e26c75e3ed73e0f848019 500 Gene3D G3DSA:3.40.630.10 166 491 2.0E-126 T 14-10-2018 GYO_3497 5e6b2dfee89e26c75e3ed73e0f848019 500 SUPERFAMILY SSF52949 10 177 1.82E-38 T 14-10-2018 GYO_3497 5e6b2dfee89e26c75e3ed73e0f848019 500 SUPERFAMILY SSF53187 176 490 2.2E-111 T 14-10-2018 GYO_3497 5e6b2dfee89e26c75e3ed73e0f848019 500 Pfam PF00883 Cytosol aminopeptidase family, catalytic domain 180 485 2.9E-117 T 14-10-2018 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 GYO_3497 5e6b2dfee89e26c75e3ed73e0f848019 500 ProSitePatterns PS00631 Cytosol aminopeptidase signature. 341 348 - T 14-10-2018 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 GYO_3497 5e6b2dfee89e26c75e3ed73e0f848019 500 PRINTS PR00481 Cytosol aminopeptidase signature 315 336 6.0E-52 T 14-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 GYO_3497 5e6b2dfee89e26c75e3ed73e0f848019 500 PRINTS PR00481 Cytosol aminopeptidase signature 278 299 6.0E-52 T 14-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 GYO_3497 5e6b2dfee89e26c75e3ed73e0f848019 500 PRINTS PR00481 Cytosol aminopeptidase signature 337 357 6.0E-52 T 14-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 GYO_3497 5e6b2dfee89e26c75e3ed73e0f848019 500 PRINTS PR00481 Cytosol aminopeptidase signature 365 380 6.0E-52 T 14-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 GYO_3497 5e6b2dfee89e26c75e3ed73e0f848019 500 PRINTS PR00481 Cytosol aminopeptidase signature 256 273 6.0E-52 T 14-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 GYO_3497 5e6b2dfee89e26c75e3ed73e0f848019 500 Pfam PF02789 Cytosol aminopeptidase family, N-terminal domain 15 142 2.6E-28 T 14-10-2018 IPR008283 Peptidase M17, leucyl aminopeptidase, N-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 GYO_3497 5e6b2dfee89e26c75e3ed73e0f848019 500 Gene3D G3DSA:3.40.220.10 1 152 1.8E-42 T 14-10-2018 GYO_1502 87414e93a11381137661529500cd6aef 93 SUPERFAMILY SSF54909 1 81 1.16E-19 T 14-10-2018 IPR011008 Dimeric alpha-beta barrel GYO_1502 87414e93a11381137661529500cd6aef 93 Gene3D G3DSA:3.30.70.100 1 93 2.6E-29 T 14-10-2018 GYO_1502 87414e93a11381137661529500cd6aef 93 Pfam PF03992 Antibiotic biosynthesis monooxygenase 3 77 6.3E-10 T 14-10-2018 IPR007138 Antibiotic biosynthesis monooxygenase domain GYO_3317 93d45560489184585ce688561426e8c3 145 Pfam PF00210 Ferritin-like domain 6 145 1.0E-32 T 14-10-2018 IPR008331 Ferritin/DPS protein domain GO:0006879|GO:0008199 GYO_3317 93d45560489184585ce688561426e8c3 145 ProSitePatterns PS00819 Dps protein family signature 2. 53 67 - T 14-10-2018 IPR023188 DNA-binding protein Dps, conserved site GO:0016722|GO:0055114 GYO_3317 93d45560489184585ce688561426e8c3 145 SUPERFAMILY SSF47240 3 145 5.24E-46 T 14-10-2018 IPR009078 Ferritin-like superfamily GYO_3317 93d45560489184585ce688561426e8c3 145 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 51 67 1.4E-14 T 14-10-2018 IPR002177 DNA-binding protein Dps GYO_3317 93d45560489184585ce688561426e8c3 145 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 122 140 1.4E-14 T 14-10-2018 IPR002177 DNA-binding protein Dps GYO_3317 93d45560489184585ce688561426e8c3 145 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 27 43 1.4E-14 T 14-10-2018 IPR002177 DNA-binding protein Dps GYO_3317 93d45560489184585ce688561426e8c3 145 PIRSF PIRSF005900 1 145 1.6E-46 T 14-10-2018 IPR002177 DNA-binding protein Dps GYO_3317 93d45560489184585ce688561426e8c3 145 ProSitePatterns PS00818 Dps protein family signature 1. 27 43 - T 14-10-2018 IPR023188 DNA-binding protein Dps, conserved site GO:0016722|GO:0055114 GYO_3317 93d45560489184585ce688561426e8c3 145 Gene3D G3DSA:1.20.1260.10 1 145 1.7E-53 T 14-10-2018 IPR012347 Ferritin-like GYO_3300 5fc6e4c328caaf16f659e3fdca861fe5 322 SMART SM00729 32 259 2.8E-44 T 14-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 GYO_3300 5fc6e4c328caaf16f659e3fdca861fe5 322 SUPERFAMILY SSF102114 4 314 1.1E-53 T 14-10-2018 GYO_3300 5fc6e4c328caaf16f659e3fdca861fe5 322 Gene3D G3DSA:3.80.30.20 50 251 1.9E-13 T 14-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe GYO_3300 5fc6e4c328caaf16f659e3fdca861fe5 322 Pfam PF16199 Radical_SAM C-terminal domain 220 303 9.9E-26 T 14-10-2018 IPR032432 Radical SAM, C-terminal extension Reactome: R-HSA-3214847 GYO_3300 5fc6e4c328caaf16f659e3fdca861fe5 322 Pfam PF04055 Radical SAM superfamily 52 214 8.5E-13 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 GYO_3300 5fc6e4c328caaf16f659e3fdca861fe5 322 TIGRFAM TIGR01212 TIGR01212: radical SAM protein, TIGR01212 family 15 314 3.0E-146 T 14-10-2018 IPR005911 Protein YhcC-like GO:0051536 GYO_0549 4be179f622587b9c537a9f33a9f52be1 151 Pfam PF06271 RDD family 6 128 5.8E-19 T 14-10-2018 IPR010432 RDD GYO_4015 5101bba52578d6f2dcb546886aa6c5aa 404 SUPERFAMILY SSF111352 3 380 4.05E-127 T 14-10-2018 GYO_4015 5101bba52578d6f2dcb546886aa6c5aa 404 ProSitePatterns PS01219 Ammonium transporters signature. 157 182 - T 14-10-2018 IPR018047 Ammonium transporter, conserved site GO:0008519|GO:0016020|GO:0072488 GYO_4015 5101bba52578d6f2dcb546886aa6c5aa 404 Pfam PF00909 Ammonium Transporter Family 7 400 3.6E-135 T 14-10-2018 IPR024041 Ammonium transporter AmtB-like domain GO:0008519|GO:0015696|GO:0016020 GYO_4015 5101bba52578d6f2dcb546886aa6c5aa 404 TIGRFAM TIGR00836 amt: ammonium transporter 5 400 1.0E-145 T 14-10-2018 IPR001905 Ammonium transporter GO:0008519|GO:0016020|GO:0072488 GYO_4015 5101bba52578d6f2dcb546886aa6c5aa 404 Gene3D G3DSA:1.10.3430.10 1 404 2.2E-144 T 14-10-2018 IPR029020 Ammonium/urea transporter GYO_4233 ec037bf7290ecf93b400c955bac6d2e8 126 Gene3D G3DSA:3.10.180.10 1 126 4.1E-30 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase GYO_4233 ec037bf7290ecf93b400c955bac6d2e8 126 ProSitePatterns PS00934 Glyoxalase I signature 1. 7 28 - T 14-10-2018 IPR018146 Glyoxalase I, conserved site GO:0004462|GO:0046872 KEGG: 00620+4.4.1.5|MetaCyc: PWY-5386|Reactome: R-HSA-70268 GYO_4233 ec037bf7290ecf93b400c955bac6d2e8 126 SUPERFAMILY SSF54593 1 126 8.46E-30 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase GYO_4233 ec037bf7290ecf93b400c955bac6d2e8 126 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 4 123 1.4E-16 T 14-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain GYO_3250 30dd9b6ae46eb39c49d73c37cd3f4a26 66 Pfam PF08220 DeoR-like helix-turn-helix domain 4 47 4.3E-9 T 14-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 GYO_3250 30dd9b6ae46eb39c49d73c37cd3f4a26 66 SMART SM00420 4 49 0.0044 T 14-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 GYO_3250 30dd9b6ae46eb39c49d73c37cd3f4a26 66 SUPERFAMILY SSF46785 4 52 2.01E-8 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily GYO_3250 30dd9b6ae46eb39c49d73c37cd3f4a26 66 Gene3D G3DSA:1.10.10.10 3 64 8.0E-7 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily GYO_2516 e8b4aa1017a176b834772a866b5adbd0 199 PIRSF PIRSF036710 1 199 9.8E-88 T 14-10-2018 IPR014617 Predicted membrane protein, Bacillus YphA type GYO_2675 f494c65bb5f471789fbc9b4056dea5bb 958 Pfam PF02384 N-6 DNA Methylase 184 491 3.3E-105 T 14-10-2018 IPR003356 DNA methylase, adenine-specific GO:0003677|GO:0006306|GO:0008170 GYO_2675 f494c65bb5f471789fbc9b4056dea5bb 958 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 342 366 8.0E-19 T 14-10-2018 GYO_2675 f494c65bb5f471789fbc9b4056dea5bb 958 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 230 244 8.0E-19 T 14-10-2018 GYO_2675 f494c65bb5f471789fbc9b4056dea5bb 958 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 206 222 8.0E-19 T 14-10-2018 GYO_2675 f494c65bb5f471789fbc9b4056dea5bb 958 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 307 319 8.0E-19 T 14-10-2018 GYO_2675 f494c65bb5f471789fbc9b4056dea5bb 958 TIGRFAM TIGR00497 hsdM: type I restriction-modification system, M subunit 11 499 5.3E-75 T 14-10-2018 IPR004546 Restriction endonuclease, type I, HsdM GO:0003677|GO:0009007|GO:0009307 GYO_2675 f494c65bb5f471789fbc9b4056dea5bb 958 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 310 316 - T 14-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 GYO_2675 f494c65bb5f471789fbc9b4056dea5bb 958 Gene3D G3DSA:1.20.1260.30 1 172 2.8E-38 T 14-10-2018 IPR038333 N6 adenine-specific DNA methyltransferase, N-terminal domain superfamily GYO_2675 f494c65bb5f471789fbc9b4056dea5bb 958 Gene3D G3DSA:3.40.50.150 183 476 1.5E-95 T 14-10-2018 GYO_2675 f494c65bb5f471789fbc9b4056dea5bb 958 Pfam PF12161 HsdM N-terminal domain 11 169 1.0E-30 T 14-10-2018 IPR022749 N6 adenine-specific DNA methyltransferase, N-terminal domain GYO_2675 f494c65bb5f471789fbc9b4056dea5bb 958 SUPERFAMILY SSF53335 9 574 1.07E-132 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase GYO_3191 4e4d49815c06b4abe56a0d706e8c8453 395 TIGRFAM TIGR00016 ackA: acetate kinase 2 394 4.9E-186 T 14-10-2018 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 GYO_3191 4e4d49815c06b4abe56a0d706e8c8453 395 Pfam PF00871 Acetokinase family 3 388 1.9E-180 T 14-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 GYO_3191 4e4d49815c06b4abe56a0d706e8c8453 395 SUPERFAMILY SSF53067 157 393 4.95E-95 T 14-10-2018 GYO_3191 4e4d49815c06b4abe56a0d706e8c8453 395 Hamap MF_00020 Acetate kinase [ackA]. 1 395 199.69 T 14-10-2018 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 GYO_3191 4e4d49815c06b4abe56a0d706e8c8453 395 ProSitePatterns PS01075 Acetate and butyrate kinases family signature 1. 4 15 - T 14-10-2018 IPR023865 Aliphatic acid kinase, short-chain, conserved site GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 GYO_3191 4e4d49815c06b4abe56a0d706e8c8453 395 PRINTS PR00471 Acetate kinase family signature 299 312 1.8E-47 T 14-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 GYO_3191 4e4d49815c06b4abe56a0d706e8c8453 395 PRINTS PR00471 Acetate kinase family signature 202 223 1.8E-47 T 14-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 GYO_3191 4e4d49815c06b4abe56a0d706e8c8453 395 PRINTS PR00471 Acetate kinase family signature 321 337 1.8E-47 T 14-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 GYO_3191 4e4d49815c06b4abe56a0d706e8c8453 395 PRINTS PR00471 Acetate kinase family signature 4 15 1.8E-47 T 14-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 GYO_3191 4e4d49815c06b4abe56a0d706e8c8453 395 PRINTS PR00471 Acetate kinase family signature 172 185 1.8E-47 T 14-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 GYO_3191 4e4d49815c06b4abe56a0d706e8c8453 395 PRINTS PR00471 Acetate kinase family signature 375 387 1.8E-47 T 14-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 GYO_3191 4e4d49815c06b4abe56a0d706e8c8453 395 SUPERFAMILY SSF53067 1 194 2.76E-73 T 14-10-2018 GYO_3191 4e4d49815c06b4abe56a0d706e8c8453 395 PIRSF PIRSF000722 1 395 1.3E-155 T 14-10-2018 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 GYO_3191 4e4d49815c06b4abe56a0d706e8c8453 395 Gene3D G3DSA:3.30.420.40 2 194 3.6E-77 T 14-10-2018 GYO_3191 4e4d49815c06b4abe56a0d706e8c8453 395 ProSitePatterns PS01076 Acetate and butyrate kinases family signature 2. 202 219 - T 14-10-2018 IPR023865 Aliphatic acid kinase, short-chain, conserved site GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 GYO_3191 4e4d49815c06b4abe56a0d706e8c8453 395 Gene3D G3DSA:3.30.420.40 195 395 3.3E-82 T 14-10-2018 GYO_2287 05c05f342903c80a6226c545439f0243 295 ProSitePatterns PS01235 PdxS/SNZ family signature. 206 224 - T 14-10-2018 IPR001852 Pyridoxal 5'-phosphate synthase subunit PdxS/SNZ GO:0042819|GO:0042823 KEGG: 00750+4.3.3.6|MetaCyc: PWY-6466 GYO_2287 05c05f342903c80a6226c545439f0243 295 SUPERFAMILY SSF51366 19 270 1.32E-67 T 14-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 GYO_2287 05c05f342903c80a6226c545439f0243 295 PIRSF PIRSF029271 1 295 2.3E-149 T 14-10-2018 IPR001852 Pyridoxal 5'-phosphate synthase subunit PdxS/SNZ GO:0042819|GO:0042823 KEGG: 00750+4.3.3.6|MetaCyc: PWY-6466 GYO_2287 05c05f342903c80a6226c545439f0243 295 Gene3D G3DSA:3.20.20.70 1 295 4.1E-143 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 GYO_2287 05c05f342903c80a6226c545439f0243 295 TIGRFAM TIGR00343 TIGR00343: pyridoxal 5'-phosphate synthase, synthase subunit Pdx1 10 295 1.9E-153 T 14-10-2018 IPR001852 Pyridoxal 5'-phosphate synthase subunit PdxS/SNZ GO:0042819|GO:0042823 KEGG: 00750+4.3.3.6|MetaCyc: PWY-6466 GYO_2287 05c05f342903c80a6226c545439f0243 295 Hamap MF_01824 Pyridoxal 5'-phosphate synthase subunit PdxS [pdxS]. 5 295 52.333 T 14-10-2018 IPR001852 Pyridoxal 5'-phosphate synthase subunit PdxS/SNZ GO:0042819|GO:0042823 KEGG: 00750+4.3.3.6|MetaCyc: PWY-6466 GYO_2287 05c05f342903c80a6226c545439f0243 295 Pfam PF01680 SOR/SNZ family 8 213 6.3E-104 T 14-10-2018 IPR033755 PdxS/SNZ N-terminal domain KEGG: 00750+4.3.3.6|MetaCyc: PWY-6466 GYO_4333 54e106e294824539dd49b026a17cad2e 469 SUPERFAMILY SSF51445 6 466 3.53E-168 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily GYO_4333 54e106e294824539dd49b026a17cad2e 469 PRINTS PR00131 Glycosyl hydrolase family 1 signature 364 372 1.5E-17 T 14-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 GYO_4333 54e106e294824539dd49b026a17cad2e 469 PRINTS PR00131 Glycosyl hydrolase family 1 signature 431 443 1.5E-17 T 14-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 GYO_4333 54e106e294824539dd49b026a17cad2e 469 PRINTS PR00131 Glycosyl hydrolase family 1 signature 298 312 1.5E-17 T 14-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 GYO_4333 54e106e294824539dd49b026a17cad2e 469 PRINTS PR00131 Glycosyl hydrolase family 1 signature 385 396 1.5E-17 T 14-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 GYO_4333 54e106e294824539dd49b026a17cad2e 469 PRINTS PR00131 Glycosyl hydrolase family 1 signature 406 423 1.5E-17 T 14-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 GYO_4333 54e106e294824539dd49b026a17cad2e 469 Pfam PF00232 Glycosyl hydrolase family 1 6 466 2.0E-149 T 14-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 GYO_4333 54e106e294824539dd49b026a17cad2e 469 Gene3D G3DSA:3.20.20.80 7 469 6.0E-160 T 14-10-2018 GYO_4333 54e106e294824539dd49b026a17cad2e 469 ProSitePatterns PS00653 Glycosyl hydrolases family 1 N-terminal signature. 12 26 - T 14-10-2018 IPR033132 Glycosyl hydrolases family 1, N-terminal conserved site GYO_4333 54e106e294824539dd49b026a17cad2e 469 ProSitePatterns PS00572 Glycosyl hydrolases family 1 active site. 364 372 - T 14-10-2018 IPR018120 Glycoside hydrolase family 1, active site GYO_1023 89c8a03d5227a33ba6b658c0515b4f25 528 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 424 527 7.9E-15 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase GYO_1023 89c8a03d5227a33ba6b658c0515b4f25 528 SUPERFAMILY SSF55874 395 526 7.86E-25 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily GYO_1023 89c8a03d5227a33ba6b658c0515b4f25 528 SUPERFAMILY SSF103190 40 167 1.49E-15 T 14-10-2018 IPR029151 Periplasmic sensor-like domain superfamily GYO_1023 89c8a03d5227a33ba6b658c0515b4f25 528 Gene3D G3DSA:3.30.565.10 383 528 2.4E-25 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily GYO_1023 89c8a03d5227a33ba6b658c0515b4f25 528 PRINTS PR00344 Bacterial sensor protein C-terminal signature 512 525 1.3E-8 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 GYO_1023 89c8a03d5227a33ba6b658c0515b4f25 528 PRINTS PR00344 Bacterial sensor protein C-terminal signature 459 473 1.3E-8 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 GYO_1023 89c8a03d5227a33ba6b658c0515b4f25 528 PRINTS PR00344 Bacterial sensor protein C-terminal signature 477 487 1.3E-8 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 GYO_1023 89c8a03d5227a33ba6b658c0515b4f25 528 PRINTS PR00344 Bacterial sensor protein C-terminal signature 488 506 1.3E-8 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 GYO_1023 89c8a03d5227a33ba6b658c0515b4f25 528 Gene3D G3DSA:3.30.450.20 34 167 7.3E-10 T 14-10-2018 GYO_1023 89c8a03d5227a33ba6b658c0515b4f25 528 Pfam PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain 323 368 8.0E-9 T 14-10-2018 IPR039506 SpoOB, alpha-helical domain GYO_1023 89c8a03d5227a33ba6b658c0515b4f25 528 SMART SM00387 420 528 9.2E-18 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase GYO_1023 89c8a03d5227a33ba6b658c0515b4f25 528 SUPERFAMILY SSF55890 326 375 1.1E-9 T 14-10-2018 IPR016120 Signal transduction histidine kinase, sporulation regulator SpoOB GO:0000155|GO:0000160|GO:0016772 GYO_1023 89c8a03d5227a33ba6b658c0515b4f25 528 SUPERFAMILY SSF55785 221 308 1.02E-5 T 14-10-2018 IPR035965 PAS domain superfamily GYO_1023 89c8a03d5227a33ba6b658c0515b4f25 528 Gene3D G3DSA:3.30.450.20 202 315 2.1E-20 T 14-10-2018 GYO_0115 a1e237a2013313b7f7eff7e19c5ccbd7 366 SMART SM00670 166 273 6.8E-15 T 14-10-2018 IPR002716 PIN domain GYO_0115 a1e237a2013313b7f7eff7e19c5ccbd7 366 SUPERFAMILY SSF88723 166 294 2.28E-23 T 14-10-2018 IPR029060 PIN-like domain superfamily GYO_0115 a1e237a2013313b7f7eff7e19c5ccbd7 366 Gene3D G3DSA:3.40.50.1010 162 297 9.3E-53 T 14-10-2018 GYO_4200 40fe103e0a2aefabc47fb63d0b1c88b1 333 TIGRFAM TIGR03558 oxido_grp_1: luciferase family oxidoreductase, group 1 4 330 5.7E-122 T 14-10-2018 IPR019949 Luciferase family oxidoreductase, group 1 GYO_4200 40fe103e0a2aefabc47fb63d0b1c88b1 333 Gene3D G3DSA:3.20.20.30 1 333 1.2E-100 T 14-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 GYO_4200 40fe103e0a2aefabc47fb63d0b1c88b1 333 Pfam PF00296 Luciferase-like monooxygenase 14 304 4.2E-39 T 14-10-2018 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 GYO_4200 40fe103e0a2aefabc47fb63d0b1c88b1 333 SUPERFAMILY SSF51679 3 329 1.96E-72 T 14-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 GYO_1323 3c1ba1ebbce95091df31f6be04aabf17 331 SUPERFAMILY SSF55681 2 244 1.14E-82 T 14-10-2018 GYO_1323 3c1ba1ebbce95091df31f6be04aabf17 331 SUPERFAMILY SSF82649 245 331 1.15E-28 T 14-10-2018 GYO_1323 3c1ba1ebbce95091df31f6be04aabf17 331 Gene3D G3DSA:3.30.390.50 245 331 2.2E-32 T 14-10-2018 GYO_1323 3c1ba1ebbce95091df31f6be04aabf17 331 Gene3D G3DSA:3.30.930.10 3 244 3.4E-82 T 14-10-2018 GYO_1323 3c1ba1ebbce95091df31f6be04aabf17 331 TIGRFAM TIGR00545 lipoyltrans: lipoyltransferase and lipoate-protein ligase 2 325 1.5E-147 T 14-10-2018 IPR004562 Lipoyltransferase/lipoate-protein ligase GO:0009249 KEGG: 00785+6.3.1.20|Reactome: R-HSA-389661 GYO_1323 3c1ba1ebbce95091df31f6be04aabf17 331 Pfam PF10437 Bacterial lipoate protein ligase C-terminus 246 330 1.3E-31 T 14-10-2018 IPR019491 Lipoate protein ligase, C-terminal KEGG: 00785+6.3.1.20 GYO_1323 3c1ba1ebbce95091df31f6be04aabf17 331 Pfam PF03099 Biotin/lipoate A/B protein ligase family 48 151 2.8E-11 T 14-10-2018 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain GO:0006464 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382 GYO_2346 10fd859272d64fe0b8533ff182cdc55b 452 PIRSF PIRSF006603 1 451 1.8E-63 T 14-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 GYO_2346 10fd859272d64fe0b8533ff182cdc55b 452 Pfam PF01554 MatE 247 407 5.3E-37 T 14-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 GYO_2346 10fd859272d64fe0b8533ff182cdc55b 452 Pfam PF01554 MatE 20 180 1.4E-35 T 14-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 GYO_2346 10fd859272d64fe0b8533ff182cdc55b 452 TIGRFAM TIGR00797 matE: MATE efflux family protein 20 421 3.9E-114 T 14-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 GYO_0650 84a96dec1307e4953622863096fbb67c 607 Gene3D G3DSA:1.20.1740.10 41 468 1.7E-27 T 14-10-2018 GYO_0650 84a96dec1307e4953622863096fbb67c 607 Pfam PF13520 Amino acid permease 27 447 6.4E-37 T 14-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 GYO_3842 b7e009e573b6fe3210720e1b2bc4d50a 157 SMART SM00347 40 143 3.9E-21 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 GYO_3842 b7e009e573b6fe3210720e1b2bc4d50a 157 SUPERFAMILY SSF46785 40 157 2.98E-19 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily GYO_3842 b7e009e573b6fe3210720e1b2bc4d50a 157 Pfam PF01047 MarR family 47 105 2.3E-15 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 GYO_3842 b7e009e573b6fe3210720e1b2bc4d50a 157 Gene3D G3DSA:1.10.10.10 2 157 3.1E-22 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily GYO_0767 09fe41f640452fe0e63696d08eb78aff 483 Pfam PF00672 HAMP domain 196 242 3.5E-8 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 GYO_0767 09fe41f640452fe0e63696d08eb78aff 483 SMART SM00388 260 327 3.1E-10 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 GYO_0767 09fe41f640452fe0e63696d08eb78aff 483 SUPERFAMILY SSF47384 246 325 6.47E-16 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 GYO_0767 09fe41f640452fe0e63696d08eb78aff 483 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 371 475 3.3E-13 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase GYO_0767 09fe41f640452fe0e63696d08eb78aff 483 PRINTS PR00344 Bacterial sensor protein C-terminal signature 441 459 3.6E-6 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 GYO_0767 09fe41f640452fe0e63696d08eb78aff 483 PRINTS PR00344 Bacterial sensor protein C-terminal signature 425 435 3.6E-6 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 GYO_0767 09fe41f640452fe0e63696d08eb78aff 483 SUPERFAMILY SSF158472 193 244 5.62E-11 T 14-10-2018 GYO_0767 09fe41f640452fe0e63696d08eb78aff 483 Pfam PF00512 His Kinase A (phospho-acceptor) domain 262 325 2.7E-11 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 GYO_0767 09fe41f640452fe0e63696d08eb78aff 483 SMART SM00387 370 480 8.7E-20 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase GYO_0767 09fe41f640452fe0e63696d08eb78aff 483 Gene3D G3DSA:1.20.1480.50 160 251 4.6E-16 T 14-10-2018 GYO_0767 09fe41f640452fe0e63696d08eb78aff 483 SUPERFAMILY SSF55874 332 476 2.23E-28 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily GYO_0767 09fe41f640452fe0e63696d08eb78aff 483 SMART SM00304 193 245 6.4E-10 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 GYO_0767 09fe41f640452fe0e63696d08eb78aff 483 Gene3D G3DSA:1.10.287.130 252 325 2.6E-18 T 14-10-2018 GYO_0767 09fe41f640452fe0e63696d08eb78aff 483 Gene3D G3DSA:3.30.565.10 331 481 1.4E-27 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily GYO_0361 1f9aa52a2a6dafb11d9a6db5ad2d00b0 283 Gene3D G3DSA:1.10.10.10 1 83 1.3E-31 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily GYO_0361 1f9aa52a2a6dafb11d9a6db5ad2d00b0 283 Pfam PF01380 SIS domain 127 256 6.0E-23 T 14-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 GYO_0361 1f9aa52a2a6dafb11d9a6db5ad2d00b0 283 Gene3D G3DSA:3.40.50.10490 95 282 2.5E-48 T 14-10-2018 GYO_0361 1f9aa52a2a6dafb11d9a6db5ad2d00b0 283 SUPERFAMILY SSF53697 101 279 3.67E-40 T 14-10-2018 GYO_0361 1f9aa52a2a6dafb11d9a6db5ad2d00b0 283 Pfam PF01418 Helix-turn-helix domain, rpiR family 4 78 1.5E-28 T 14-10-2018 IPR000281 Helix-turn-helix protein RpiR GO:0003700|GO:0006355 GYO_0361 1f9aa52a2a6dafb11d9a6db5ad2d00b0 283 SUPERFAMILY SSF46689 5 78 1.97E-18 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 GYO_1679 fe45b71e1d8bab0afdebd563eeb51f9c 738 SUPERFAMILY SSF55785 137 259 1.24E-13 T 14-10-2018 IPR035965 PAS domain superfamily GYO_1679 fe45b71e1d8bab0afdebd563eeb51f9c 738 Gene3D G3DSA:3.30.565.10 582 737 1.3E-46 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily GYO_1679 fe45b71e1d8bab0afdebd563eeb51f9c 738 Gene3D G3DSA:1.10.287.130 501 579 8.5E-16 T 14-10-2018 GYO_1679 fe45b71e1d8bab0afdebd563eeb51f9c 738 Gene3D G3DSA:3.30.450.20 148 271 3.6E-13 T 14-10-2018 GYO_1679 fe45b71e1d8bab0afdebd563eeb51f9c 738 SMART SM00091 31 97 9.7E-5 T 14-10-2018 IPR000014 PAS domain GYO_1679 fe45b71e1d8bab0afdebd563eeb51f9c 738 SMART SM00091 393 458 2.5E-5 T 14-10-2018 IPR000014 PAS domain GYO_1679 fe45b71e1d8bab0afdebd563eeb51f9c 738 SMART SM00091 152 218 2.6E-4 T 14-10-2018 IPR000014 PAS domain GYO_1679 fe45b71e1d8bab0afdebd563eeb51f9c 738 SMART SM00091 273 341 6.0E-6 T 14-10-2018 IPR000014 PAS domain GYO_1679 fe45b71e1d8bab0afdebd563eeb51f9c 738 SUPERFAMILY SSF55785 378 457 7.46E-15 T 14-10-2018 IPR035965 PAS domain superfamily GYO_1679 fe45b71e1d8bab0afdebd563eeb51f9c 738 SMART SM00388 516 580 2.4E-14 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 GYO_1679 fe45b71e1d8bab0afdebd563eeb51f9c 738 Gene3D G3DSA:3.30.450.20 28 139 2.0E-13 T 14-10-2018 GYO_1679 fe45b71e1d8bab0afdebd563eeb51f9c 738 Gene3D G3DSA:3.30.450.20 272 378 5.4E-15 T 14-10-2018 GYO_1679 fe45b71e1d8bab0afdebd563eeb51f9c 738 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 624 728 2.2E-24 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase GYO_1679 fe45b71e1d8bab0afdebd563eeb51f9c 738 SUPERFAMILY SSF47384 511 578 9.81E-12 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 GYO_1679 fe45b71e1d8bab0afdebd563eeb51f9c 738 SUPERFAMILY SSF55785 258 370 1.65E-15 T 14-10-2018 IPR035965 PAS domain superfamily GYO_1679 fe45b71e1d8bab0afdebd563eeb51f9c 738 Pfam PF13188 PAS domain 394 441 3.1E-5 T 14-10-2018 IPR000014 PAS domain GYO_1679 fe45b71e1d8bab0afdebd563eeb51f9c 738 Pfam PF13188 PAS domain 273 319 9.7E-7 T 14-10-2018 IPR000014 PAS domain GYO_1679 fe45b71e1d8bab0afdebd563eeb51f9c 738 Pfam PF13188 PAS domain 32 79 1.1E-6 T 14-10-2018 IPR000014 PAS domain GYO_1679 fe45b71e1d8bab0afdebd563eeb51f9c 738 PRINTS PR00344 Bacterial sensor protein C-terminal signature 660 674 5.5E-16 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 GYO_1679 fe45b71e1d8bab0afdebd563eeb51f9c 738 PRINTS PR00344 Bacterial sensor protein C-terminal signature 678 688 5.5E-16 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 GYO_1679 fe45b71e1d8bab0afdebd563eeb51f9c 738 PRINTS PR00344 Bacterial sensor protein C-terminal signature 713 726 5.5E-16 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 GYO_1679 fe45b71e1d8bab0afdebd563eeb51f9c 738 PRINTS PR00344 Bacterial sensor protein C-terminal signature 689 707 5.5E-16 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 GYO_1679 fe45b71e1d8bab0afdebd563eeb51f9c 738 SUPERFAMILY SSF55874 575 728 4.98E-41 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily GYO_1679 fe45b71e1d8bab0afdebd563eeb51f9c 738 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 31 146 1.2E-6 T 14-10-2018 IPR000014 PAS domain GYO_1679 fe45b71e1d8bab0afdebd563eeb51f9c 738 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 271 388 1.3E-9 T 14-10-2018 IPR000014 PAS domain GYO_1679 fe45b71e1d8bab0afdebd563eeb51f9c 738 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 389 508 2.0E-11 T 14-10-2018 IPR000014 PAS domain GYO_1679 fe45b71e1d8bab0afdebd563eeb51f9c 738 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 150 267 3.1E-8 T 14-10-2018 IPR000014 PAS domain GYO_1679 fe45b71e1d8bab0afdebd563eeb51f9c 738 Pfam PF13426 PAS domain 163 260 0.0011 T 14-10-2018 IPR000014 PAS domain GYO_1679 fe45b71e1d8bab0afdebd563eeb51f9c 738 Gene3D G3DSA:3.30.450.20 379 499 8.3E-15 T 14-10-2018 GYO_1679 fe45b71e1d8bab0afdebd563eeb51f9c 738 SMART SM00387 622 729 2.5E-32 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase GYO_1679 fe45b71e1d8bab0afdebd563eeb51f9c 738 SUPERFAMILY SSF55785 19 138 4.01E-13 T 14-10-2018 IPR035965 PAS domain superfamily GYO_1679 fe45b71e1d8bab0afdebd563eeb51f9c 738 Pfam PF00512 His Kinase A (phospho-acceptor) domain 518 578 2.3E-14 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 GYO_3227 31d22ad1f8e2893d951916fc16c59fee 432 SUPERFAMILY SSF53244 294 428 4.76E-37 T 14-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 GYO_3227 31d22ad1f8e2893d951916fc16c59fee 432 TIGRFAM TIGR01082 murC: UDP-N-acetylmuramate--L-alanine ligase 4 431 1.6E-149 T 14-10-2018 IPR005758 UDP-N-acetylmuramate--L-alanine ligase GO:0008763|GO:0009252 KEGG: 00471+6.3.2.8|KEGG: 00550+6.3.2.8|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 GYO_3227 31d22ad1f8e2893d951916fc16c59fee 432 Pfam PF08245 Mur ligase middle domain 106 275 1.5E-25 T 14-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 GYO_3227 31d22ad1f8e2893d951916fc16c59fee 432 Gene3D G3DSA:3.40.1190.10 91 292 1.2E-52 T 14-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 GYO_3227 31d22ad1f8e2893d951916fc16c59fee 432 Pfam PF02875 Mur ligase family, glutamate ligase domain 295 377 4.7E-19 T 14-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 GYO_3227 31d22ad1f8e2893d951916fc16c59fee 432 Gene3D G3DSA:3.90.190.20 293 431 6.3E-39 T 14-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 GYO_3227 31d22ad1f8e2893d951916fc16c59fee 432 Gene3D G3DSA:3.40.50.720 3 89 5.9E-21 T 14-10-2018 GYO_3227 31d22ad1f8e2893d951916fc16c59fee 432 SUPERFAMILY SSF53623 87 293 8.5E-59 T 14-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 GYO_3227 31d22ad1f8e2893d951916fc16c59fee 432 SUPERFAMILY SSF51984 4 88 1.37E-20 T 14-10-2018 GYO_3227 31d22ad1f8e2893d951916fc16c59fee 432 Pfam PF01225 Mur ligase family, catalytic domain 4 101 2.6E-23 T 14-10-2018 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 GYO_3227 31d22ad1f8e2893d951916fc16c59fee 432 Hamap MF_00046 UDP-N-acetylmuramate--L-alanine ligase [murC]. 1 432 34.288 T 14-10-2018 IPR005758 UDP-N-acetylmuramate--L-alanine ligase GO:0008763|GO:0009252 KEGG: 00471+6.3.2.8|KEGG: 00550+6.3.2.8|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 GYO_3846 1ec9f470d9688bb8e80910b24f2a1a8c 169 SMART SM00347 38 141 3.8E-23 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 GYO_3846 1ec9f470d9688bb8e80910b24f2a1a8c 169 Gene3D G3DSA:1.10.10.10 5 158 4.5E-22 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily GYO_3846 1ec9f470d9688bb8e80910b24f2a1a8c 169 ProSitePatterns PS01117 MarR-type HTH domain signature. 77 111 - T 14-10-2018 IPR023187 Transcriptional regulator MarR-type, conserved site GYO_3846 1ec9f470d9688bb8e80910b24f2a1a8c 169 SUPERFAMILY SSF46785 31 160 4.71E-20 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily GYO_3846 1ec9f470d9688bb8e80910b24f2a1a8c 169 Pfam PF01047 MarR family 46 103 6.6E-16 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 GYO_1568 69d2954157986312f8db7277b754ee7c 169 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 40 160 1.8E-14 T 14-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 GYO_1568 69d2954157986312f8db7277b754ee7c 169 Pfam PF08281 Sigma-70, region 4 104 157 2.4E-14 T 14-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 GYO_1568 69d2954157986312f8db7277b754ee7c 169 SUPERFAMILY SSF88659 98 163 2.03E-13 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like GYO_1568 69d2954157986312f8db7277b754ee7c 169 Gene3D G3DSA:1.10.10.10 90 165 4.3E-15 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily GYO_3042 906c9c4040f4564d76376260e3e7e48d 226 Gene3D G3DSA:2.160.20.70 101 224 9.6E-36 T 14-10-2018 IPR016098 Cyclase-associated protein CAP/septum formation inhibitor MinC, C-terminal GO:0000902 GYO_3042 906c9c4040f4564d76376260e3e7e48d 226 Gene3D G3DSA:3.30.160.540 7 87 3.3E-31 T 14-10-2018 GYO_3042 906c9c4040f4564d76376260e3e7e48d 226 Hamap MF_00267 Probable septum site-determining protein MinC [minC]. 8 210 22.546 T 14-10-2018 IPR013033 Septum formation inhibitor MinC GO:0051726|GO:1901891 GYO_3042 906c9c4040f4564d76376260e3e7e48d 226 TIGRFAM TIGR01222 minC: septum site-determining protein MinC 8 209 1.7E-56 T 14-10-2018 IPR013033 Septum formation inhibitor MinC GO:0051726|GO:1901891 GYO_3042 906c9c4040f4564d76376260e3e7e48d 226 Pfam PF03775 Septum formation inhibitor MinC, C-terminal domain 108 206 3.0E-31 T 14-10-2018 IPR005526 Septum formation inhibitor MinC, C-terminal GO:0000902 GYO_3042 906c9c4040f4564d76376260e3e7e48d 226 SUPERFAMILY SSF63848 106 210 4.05E-30 T 14-10-2018 IPR036145 Septum formation inhibitor MinC, C-terminal domain superfamily GO:0000902 GYO_3204 46131afd54eb5d390734f3a3f0d8fe0b 401 Gene3D G3DSA:3.40.50.620 175 401 8.0E-73 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold GYO_3204 46131afd54eb5d390734f3a3f0d8fe0b 401 SUPERFAMILY SSF52402 174 387 8.16E-51 T 14-10-2018 GYO_3204 46131afd54eb5d390734f3a3f0d8fe0b 401 Pfam PF02926 THUMP domain 33 164 4.6E-27 T 14-10-2018 IPR004114 THUMP domain GO:0003723 GYO_3204 46131afd54eb5d390734f3a3f0d8fe0b 401 Hamap MF_00021 tRNA sulfurtransferase [thiI]. 1 401 165.609 T 14-10-2018 IPR003720 tRNA sulfurtransferase ThiI GO:0005737|GO:0016783|GO:0034227 KEGG: 00730+2.8.1.4 GYO_3204 46131afd54eb5d390734f3a3f0d8fe0b 401 TIGRFAM TIGR00342 TIGR00342: tRNA sulfurtransferase ThiI 6 372 5.2E-151 T 14-10-2018 IPR003720 tRNA sulfurtransferase ThiI GO:0005737|GO:0016783|GO:0034227 KEGG: 00730+2.8.1.4 GYO_3204 46131afd54eb5d390734f3a3f0d8fe0b 401 SUPERFAMILY SSF143437 3 173 3.66E-53 T 14-10-2018 GYO_3204 46131afd54eb5d390734f3a3f0d8fe0b 401 Pfam PF02568 Thiamine biosynthesis protein (ThiI) 175 371 7.4E-66 T 14-10-2018 IPR020536 Thil, AANH domain GO:0004810 KEGG: 00730+2.8.1.4 GYO_3204 46131afd54eb5d390734f3a3f0d8fe0b 401 SMART SM00981 74 165 6.4E-24 T 14-10-2018 IPR004114 THUMP domain GO:0003723 GYO_3204 46131afd54eb5d390734f3a3f0d8fe0b 401 Gene3D G3DSA:3.30.2130.30 1 174 8.2E-59 T 14-10-2018 GYO_1575 c047c655afeddb1b4d4d6900890a987c 118 ProDom PD031312 YQBH LIN1274 PHAGE XKDH PHAGE-LIKE PBSX RELATED ELEMENT 1 118 8.0E-62 T 14-10-2018 IPR024556 Protein of unknown function DUF3599 GYO_1575 c047c655afeddb1b4d4d6900890a987c 118 Gene3D G3DSA:2.40.10.370 1 118 1.1E-54 T 14-10-2018 IPR038667 XkdH-like superfamily GYO_1575 c047c655afeddb1b4d4d6900890a987c 118 Pfam PF12206 Domain of unknown function (DUF3599) 1 116 9.5E-57 T 14-10-2018 IPR024556 Protein of unknown function DUF3599 GYO_2184 57499ad77b0ec30950d7f7baaa02fa20 87 ProDom PD062295 YNFE TRANSFERASE YFNE ACETYLTRANSFERASE 3 79 2.0E-34 T 14-10-2018 IPR020302 Uncharacterised protein family YnfE GYO_2184 57499ad77b0ec30950d7f7baaa02fa20 87 Pfam PF17452 Uncharacterized protein YnfE 3 80 4.7E-39 T 14-10-2018 IPR020302 Uncharacterised protein family YnfE GYO_2202 d64f81075a9a23abb442a0de0438735d 3971 Gene3D G3DSA:3.30.559.10 2499 2855 3.3E-132 T 14-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 GYO_2202 d64f81075a9a23abb442a0de0438735d 3971 Pfam PF00202 Aminotransferase class-III 1527 1888 2.0E-54 T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 GYO_2202 d64f81075a9a23abb442a0de0438735d 3971 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 925 1042 3.7E-41 T 14-10-2018 IPR014031 Beta-ketoacyl synthase, C-terminal GYO_2202 d64f81075a9a23abb442a0de0438735d 3971 SUPERFAMILY SSF52777 2127 2368 4.34E-38 T 14-10-2018 GYO_2202 d64f81075a9a23abb442a0de0438735d 3971 Gene3D G3DSA:3.30.559.30 2133 2385 1.6E-36 T 14-10-2018 GYO_2202 d64f81075a9a23abb442a0de0438735d 3971 SMART SM00825 Beta-ketoacyl synthase 672 1095 1.2E-176 T 14-10-2018 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain GYO_2202 d64f81075a9a23abb442a0de0438735d 3971 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 2967 3364 9.7E-137 T 14-10-2018 IPR010071 Amino acid adenylation domain GYO_2202 d64f81075a9a23abb442a0de0438735d 3971 ProSitePatterns PS00012 Phosphopantetheine attachment site. 2435 2450 - T 14-10-2018 IPR006162 Phosphopantetheine attachment site GYO_2202 d64f81075a9a23abb442a0de0438735d 3971 Pfam PF13193 AMP-binding enzyme C-terminal domain 3348 3421 5.8E-11 T 14-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain GYO_2202 d64f81075a9a23abb442a0de0438735d 3971 Gene3D G3DSA:3.90.1150.10 1510 1911 3.2E-120 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 GYO_2202 d64f81075a9a23abb442a0de0438735d 3971 Gene3D G3DSA:3.30.300.30 449 553 4.1E-28 T 14-10-2018 GYO_2202 d64f81075a9a23abb442a0de0438735d 3971 Gene3D G3DSA:3.30.70.3050 1149 1253 3.3E-220 T 14-10-2018 GYO_2202 d64f81075a9a23abb442a0de0438735d 3971 Pfam PF00668 Condensation domain 3532 3954 1.2E-122 T 14-10-2018 IPR001242 Condensation domain GYO_2202 d64f81075a9a23abb442a0de0438735d 3971 Pfam PF00668 Condensation domain 2495 2926 1.1E-114 T 14-10-2018 IPR001242 Condensation domain GYO_2202 d64f81075a9a23abb442a0de0438735d 3971 Pfam PF00668 Condensation domain 1940 2379 2.5E-74 T 14-10-2018 IPR001242 Condensation domain GYO_2202 d64f81075a9a23abb442a0de0438735d 3971 ProSitePatterns PS00455 Putative AMP-binding domain signature. 169 180 - T 14-10-2018 IPR020845 AMP-binding, conserved site GYO_2202 d64f81075a9a23abb442a0de0438735d 3971 Gene3D G3DSA:3.40.640.10 1563 1830 3.2E-120 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 GYO_2202 d64f81075a9a23abb442a0de0438735d 3971 Gene3D G3DSA:3.40.47.10 671 1264 3.3E-220 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 GYO_2202 d64f81075a9a23abb442a0de0438735d 3971 SUPERFAMILY SSF47336 1288 1380 6.28E-15 T 14-10-2018 IPR036736 ACP-like superfamily GYO_2202 d64f81075a9a23abb442a0de0438735d 3971 SUPERFAMILY SSF52777 3704 3948 3.22E-58 T 14-10-2018 GYO_2202 d64f81075a9a23abb442a0de0438735d 3971 SUPERFAMILY SSF52777 2669 2932 2.33E-59 T 14-10-2018 GYO_2202 d64f81075a9a23abb442a0de0438735d 3971 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 1728 1764 - T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 GYO_2202 d64f81075a9a23abb442a0de0438735d 3971 Gene3D G3DSA:3.40.50.12780 2932 3334 3.6E-129 T 14-10-2018 GYO_2202 d64f81075a9a23abb442a0de0438735d 3971 Pfam PF00501 AMP-binding enzyme 2946 3340 4.7E-100 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 GYO_2202 d64f81075a9a23abb442a0de0438735d 3971 Pfam PF00501 AMP-binding enzyme 32 453 2.4E-70 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 GYO_2202 d64f81075a9a23abb442a0de0438735d 3971 SUPERFAMILY SSF47336 579 683 4.71E-15 T 14-10-2018 IPR036736 ACP-like superfamily GYO_2202 d64f81075a9a23abb442a0de0438735d 3971 Gene3D G3DSA:3.30.300.30 3335 3436 1.1E-33 T 14-10-2018 GYO_2202 d64f81075a9a23abb442a0de0438735d 3971 SUPERFAMILY SSF47336 2403 2477 6.94E-17 T 14-10-2018 IPR036736 ACP-like superfamily GYO_2202 d64f81075a9a23abb442a0de0438735d 3971 Gene3D G3DSA:1.10.1200.10 1286 1394 6.7E-13 T 14-10-2018 IPR036736 ACP-like superfamily GYO_2202 d64f81075a9a23abb442a0de0438735d 3971 Gene3D G3DSA:3.30.559.30 2665 2910 3.3E-132 T 14-10-2018 GYO_2202 d64f81075a9a23abb442a0de0438735d 3971 SUPERFAMILY SSF52777 1944 2120 7.23E-39 T 14-10-2018 GYO_2202 d64f81075a9a23abb442a0de0438735d 3971 Gene3D G3DSA:3.40.50.12780 1 448 1.4E-119 T 14-10-2018 GYO_2202 d64f81075a9a23abb442a0de0438735d 3971 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 670 917 1.1E-67 T 14-10-2018 IPR014030 Beta-ketoacyl synthase, N-terminal GYO_2202 d64f81075a9a23abb442a0de0438735d 3971 Pfam PF00550 Phosphopantetheine attachment site 1296 1361 1.2E-11 T 14-10-2018 IPR009081 Phosphopantetheine binding ACP domain GYO_2202 d64f81075a9a23abb442a0de0438735d 3971 Pfam PF00550 Phosphopantetheine attachment site 3450 3512 1.2E-13 T 14-10-2018 IPR009081 Phosphopantetheine binding ACP domain GYO_2202 d64f81075a9a23abb442a0de0438735d 3971 Pfam PF00550 Phosphopantetheine attachment site 587 649 1.5E-12 T 14-10-2018 IPR009081 Phosphopantetheine binding ACP domain GYO_2202 d64f81075a9a23abb442a0de0438735d 3971 Pfam PF00550 Phosphopantetheine attachment site 2412 2475 1.8E-12 T 14-10-2018 IPR009081 Phosphopantetheine binding ACP domain GYO_2202 d64f81075a9a23abb442a0de0438735d 3971 ProSitePatterns PS00012 Phosphopantetheine attachment site. 3472 3487 - T 14-10-2018 IPR006162 Phosphopantetheine attachment site GYO_2202 d64f81075a9a23abb442a0de0438735d 3971 Pfam PF16197 Ketoacyl-synthetase C-terminal extension 1045 1150 1.4E-17 T 14-10-2018 IPR032821 Ketoacyl-synthetase, C-terminal extension Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 GYO_2202 d64f81075a9a23abb442a0de0438735d 3971 SUPERFAMILY SSF53901 667 1038 2.49E-86 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 GYO_2202 d64f81075a9a23abb442a0de0438735d 3971 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 834 850 - T 14-10-2018 IPR018201 Beta-ketoacyl synthase, active site GYO_2202 d64f81075a9a23abb442a0de0438735d 3971 Gene3D G3DSA:1.10.1200.10 2396 2484 9.5E-23 T 14-10-2018 IPR036736 ACP-like superfamily GYO_2202 d64f81075a9a23abb442a0de0438735d 3971 ProSitePatterns PS00455 Putative AMP-binding domain signature. 3085 3096 - T 14-10-2018 IPR020845 AMP-binding, conserved site GYO_2202 d64f81075a9a23abb442a0de0438735d 3971 SUPERFAMILY SSF47336 3440 3511 6.02E-19 T 14-10-2018 IPR036736 ACP-like superfamily GYO_2202 d64f81075a9a23abb442a0de0438735d 3971 Gene3D G3DSA:1.10.1200.10 3437 3518 3.6E-25 T 14-10-2018 IPR036736 ACP-like superfamily GYO_2202 d64f81075a9a23abb442a0de0438735d 3971 Gene3D G3DSA:1.10.1200.10 572 656 3.6E-16 T 14-10-2018 IPR036736 ACP-like superfamily GYO_2202 d64f81075a9a23abb442a0de0438735d 3971 Gene3D G3DSA:3.30.559.10 1936 2132 3.1E-48 T 14-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 GYO_2202 d64f81075a9a23abb442a0de0438735d 3971 SUPERFAMILY SSF52777 2499 2661 1.22E-37 T 14-10-2018 GYO_2202 d64f81075a9a23abb442a0de0438735d 3971 SUPERFAMILY SSF56801 5 555 3.66E-97 T 14-10-2018 GYO_2202 d64f81075a9a23abb442a0de0438735d 3971 SUPERFAMILY SSF56801 2904 3461 4.06E-153 T 14-10-2018 GYO_2202 d64f81075a9a23abb442a0de0438735d 3971 Gene3D G3DSA:3.30.559.30 3702 3948 1.1E-145 T 14-10-2018 GYO_2202 d64f81075a9a23abb442a0de0438735d 3971 Gene3D G3DSA:3.30.559.10 3534 3892 1.1E-145 T 14-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 GYO_2202 d64f81075a9a23abb442a0de0438735d 3971 SUPERFAMILY SSF53383 1504 1917 3.02E-88 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase GYO_2202 d64f81075a9a23abb442a0de0438735d 3971 SUPERFAMILY SSF52777 3536 3698 3.78E-45 T 14-10-2018 GYO_2202 d64f81075a9a23abb442a0de0438735d 3971 SMART SM00823 Phosphopantetheine attachment site 581 653 0.0012 T 14-10-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 GYO_2202 d64f81075a9a23abb442a0de0438735d 3971 SMART SM00823 Phosphopantetheine attachment site 2411 2480 0.038 T 14-10-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 GYO_2202 d64f81075a9a23abb442a0de0438735d 3971 SMART SM00823 Phosphopantetheine attachment site 3448 3517 0.001 T 14-10-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 GYO_2202 d64f81075a9a23abb442a0de0438735d 3971 SMART SM00823 Phosphopantetheine attachment site 1293 1347 0.0013 T 14-10-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 GYO_2034 c732fd8e583de0c9bc486ad8481b0dd2 555 Pfam PF07521 Zn-dependent metallo-hydrolase RNA specificity domain 362 407 3.1E-9 T 14-10-2018 IPR011108 Zn-dependent metallo-hydrolase, RNA specificity domain GYO_2034 c732fd8e583de0c9bc486ad8481b0dd2 555 Hamap MF_01491 Ribonuclease J [rnj]. 4 555 45.512 T 14-10-2018 IPR030854 Ribonuclease J, bacteria GO:0004521|GO:0004534|GO:0006396|GO:0008270|GO:0090501 GYO_2034 c732fd8e583de0c9bc486ad8481b0dd2 555 Pfam PF00753 Metallo-beta-lactamase superfamily 20 167 3.8E-11 T 14-10-2018 IPR001279 Metallo-beta-lactamase GYO_2034 c732fd8e583de0c9bc486ad8481b0dd2 555 Gene3D G3DSA:3.60.15.10 12 442 4.7E-168 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like GYO_2034 c732fd8e583de0c9bc486ad8481b0dd2 555 PIRSF PIRSF004803 1 555 1.0E-231 T 14-10-2018 IPR030854 Ribonuclease J, bacteria GO:0004521|GO:0004534|GO:0006396|GO:0008270|GO:0090501 GYO_2034 c732fd8e583de0c9bc486ad8481b0dd2 555 TIGRFAM TIGR00649 MG423: beta-CASP ribonuclease, RNase J family 9 553 4.6E-230 T 14-10-2018 IPR004613 Ribonuclease J GO:0003723|GO:0046872 GYO_2034 c732fd8e583de0c9bc486ad8481b0dd2 555 Gene3D G3DSA:3.40.50.10710 208 358 4.7E-168 T 14-10-2018 GYO_2034 c732fd8e583de0c9bc486ad8481b0dd2 555 SMART SM00849 21 215 2.0E-14 T 14-10-2018 IPR001279 Metallo-beta-lactamase GYO_2034 c732fd8e583de0c9bc486ad8481b0dd2 555 Gene3D G3DSA:3.10.20.580 449 555 1.5E-37 T 14-10-2018 GYO_2034 c732fd8e583de0c9bc486ad8481b0dd2 555 SUPERFAMILY SSF56281 10 424 3.41E-81 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like GYO_4500 971673740b124e4cab7ce49f77073c56 126 SUPERFAMILY SSF54593 1 125 7.92E-25 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase GYO_4500 971673740b124e4cab7ce49f77073c56 126 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 2 124 6.8E-16 T 14-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain GYO_4500 971673740b124e4cab7ce49f77073c56 126 Gene3D G3DSA:3.10.180.10 1 126 8.4E-36 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase GYO_0071 90779b768fb3a4385560a6e700fe167d 100 PIRSF PIRSF011576 1 100 9.3E-58 T 14-10-2018 IPR012504 Sporulation protein YabP GYO_0071 90779b768fb3a4385560a6e700fe167d 100 Pfam PF07873 YabP family 17 82 7.1E-21 T 14-10-2018 IPR022476 Sporulation protein YabP/YqfC GYO_0071 90779b768fb3a4385560a6e700fe167d 100 ProDom PD067726 YABP B.SUBTILIS PRECURSOR UNCHARACTERIZED BH0074 SIGNAL CPE2477 PROTEIN 16 100 3.0E-42 T 14-10-2018 IPR012504 Sporulation protein YabP GYO_0071 90779b768fb3a4385560a6e700fe167d 100 Gene3D G3DSA:2.60.40.2000 25 82 1.9E-23 T 14-10-2018 IPR038705 YabP superfamily GYO_0071 90779b768fb3a4385560a6e700fe167d 100 TIGRFAM TIGR02892 spore_yabP: sporulation protein YabP 17 100 5.7E-34 T 14-10-2018 IPR012504 Sporulation protein YabP GYO_4476 a79f687a6bf5799d9737cccd0184008f 436 SUPERFAMILY SSF103473 13 435 9.29E-82 T 14-10-2018 IPR036259 MFS transporter superfamily GYO_4476 a79f687a6bf5799d9737cccd0184008f 436 Gene3D G3DSA:1.20.1250.20 14 208 1.7E-44 T 14-10-2018 GYO_4476 a79f687a6bf5799d9737cccd0184008f 436 Gene3D G3DSA:1.20.1250.20 231 432 3.9E-28 T 14-10-2018 GYO_4476 a79f687a6bf5799d9737cccd0184008f 436 Pfam PF07690 Major Facilitator Superfamily 30 387 8.5E-57 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 GYO_2292 e6ade01476cbe2296633beb98655935a 50 SUPERFAMILY SSF49899 1 37 1.27E-6 T 14-10-2018 IPR013320 Concanavalin A-like lectin/glucanase domain superfamily GYO_2292 e6ade01476cbe2296633beb98655935a 50 Gene3D G3DSA:2.60.120.560 1 49 6.5E-9 T 14-10-2018 GYO_2292 e6ade01476cbe2296633beb98655935a 50 Pfam PF08244 Glycosyl hydrolases family 32 C terminal 1 31 1.3E-5 T 14-10-2018 IPR013189 Glycosyl hydrolase family 32, C-terminal GYO_3352 2b8d9db5f620d5345b158e28f85328b3 380 SUPERFAMILY SSF53448 2 340 9.98E-86 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases GYO_3352 2b8d9db5f620d5345b158e28f85328b3 380 SUPERFAMILY SSF51161 292 361 3.46E-15 T 14-10-2018 IPR011004 Trimeric LpxA-like superfamily GYO_3352 2b8d9db5f620d5345b158e28f85328b3 380 ProSitePatterns PS00810 ADP-glucose pyrophosphorylase signature 3. 189 199 - T 14-10-2018 IPR005836 ADP-glucose pyrophosphorylase, conserved site GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|MetaCyc: PWY-7902 GYO_3352 2b8d9db5f620d5345b158e28f85328b3 380 Gene3D G3DSA:3.90.550.10 1 273 2.2E-94 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases GYO_3352 2b8d9db5f620d5345b158e28f85328b3 380 Gene3D G3DSA:2.160.10.10 274 377 6.5E-27 T 14-10-2018 GYO_3352 2b8d9db5f620d5345b158e28f85328b3 380 ProSitePatterns PS00808 ADP-glucose pyrophosphorylase signature 1. 11 30 - T 14-10-2018 IPR005836 ADP-glucose pyrophosphorylase, conserved site GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|MetaCyc: PWY-7902 GYO_3352 2b8d9db5f620d5345b158e28f85328b3 380 Pfam PF00483 Nucleotidyl transferase 7 260 2.8E-73 T 14-10-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 GYO_3352 2b8d9db5f620d5345b158e28f85328b3 380 Hamap MF_00624 Glucose-1-phosphate adenylyltransferase [glgC]. 2 376 49.148 T 14-10-2018 IPR023049 Glucose-1-phosphate adenylyltransferase GlgC, bacterial GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|MetaCyc: PWY-7902 GYO_3352 2b8d9db5f620d5345b158e28f85328b3 380 ProSitePatterns PS00809 ADP-glucose pyrophosphorylase signature 2. 98 106 - T 14-10-2018 IPR005836 ADP-glucose pyrophosphorylase, conserved site GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|MetaCyc: PWY-7902 GYO_3352 2b8d9db5f620d5345b158e28f85328b3 380 TIGRFAM TIGR02091 glgC: glucose-1-phosphate adenylyltransferase 5 359 1.4E-150 T 14-10-2018 IPR011831 Glucose-1-phosphate adenylyltransferase GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|MetaCyc: PWY-7902 GYO_0232 0b670d9789bd4196e91bf6af78b79261 167 Pfam PF04883 Bacteriophage HK97-gp10, putative tail-component 7 92 2.3E-11 T 14-10-2018 IPR010064 Bacteriophage HK97-gp10, putative tail-component GYO_0232 0b670d9789bd4196e91bf6af78b79261 167 ProDom PD034535 XKDI PHAGE PHAGE-LIKE PBSX LIN1275 RELATED ELEMENT YQBI 1 163 3.0E-86 T 14-10-2018 GYO_0311 0b670d9789bd4196e91bf6af78b79261 167 Pfam PF04883 Bacteriophage HK97-gp10, putative tail-component 7 92 2.3E-11 T 14-10-2018 IPR010064 Bacteriophage HK97-gp10, putative tail-component GYO_0311 0b670d9789bd4196e91bf6af78b79261 167 ProDom PD034535 XKDI PHAGE PHAGE-LIKE PBSX LIN1275 RELATED ELEMENT YQBI 1 163 3.0E-86 T 14-10-2018 GYO_2099 4bba59db45d0d8b963293a9efaf75035 206 SUPERFAMILY SSF55811 64 190 2.71E-5 T 14-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 GYO_2099 4bba59db45d0d8b963293a9efaf75035 206 Gene3D G3DSA:3.90.79.10 1 206 3.5E-61 T 14-10-2018 GYO_3766 1b1afa6d3a2f81d458b66f35b7a9f8ce 382 Gene3D G3DSA:3.40.50.2000 18 178 1.2E-54 T 14-10-2018 GYO_3766 1b1afa6d3a2f81d458b66f35b7a9f8ce 382 Gene3D G3DSA:3.40.50.2000 179 309 1.2E-54 T 14-10-2018 GYO_3766 1b1afa6d3a2f81d458b66f35b7a9f8ce 382 Pfam PF13439 Glycosyltransferase Family 4 18 182 8.9E-21 T 14-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 GYO_3766 1b1afa6d3a2f81d458b66f35b7a9f8ce 382 Pfam PF00534 Glycosyl transferases group 1 192 310 5.7E-26 T 14-10-2018 IPR001296 Glycosyl transferase, family 1 GYO_3766 1b1afa6d3a2f81d458b66f35b7a9f8ce 382 SUPERFAMILY SSF53756 7 310 1.06E-58 T 14-10-2018 GYO_0862 43b3bf9c3721dc902b6587f6e5625305 57 Pfam PF02416 mttA/Hcf106 family 3 55 3.3E-24 T 14-10-2018 IPR003369 Sec-independent protein translocase protein TatA/B/E GO:0008565|GO:0015031 GYO_0862 43b3bf9c3721dc902b6587f6e5625305 57 Hamap MF_00236 Sec-independent protein translocase protein TatA [tatA]. 1 56 16.871 T 14-10-2018 IPR006312 Sec-independent protein translocase protein TatA/E GO:0005886|GO:0008565|GO:0009306|GO:0015031|GO:0016021 GYO_0862 43b3bf9c3721dc902b6587f6e5625305 57 TIGRFAM TIGR01411 tatAE: twin arginine-targeting protein translocase, TatA/E family 3 47 6.6E-19 T 14-10-2018 IPR006312 Sec-independent protein translocase protein TatA/E GO:0005886|GO:0008565|GO:0009306|GO:0015031|GO:0016021 GYO_1045 874421dbb1adaf6bcb841c07c5f58583 470 SUPERFAMILY SSF55604 7 83 9.94E-21 T 14-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 GYO_1045 874421dbb1adaf6bcb841c07c5f58583 470 Gene3D G3DSA:3.30.1360.60 2 79 5.6E-27 T 14-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 GYO_1045 874421dbb1adaf6bcb841c07c5f58583 470 Pfam PF02378 Phosphotransferase system, EIIC 112 409 1.1E-45 T 14-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 GYO_1045 874421dbb1adaf6bcb841c07c5f58583 470 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 20 37 - T 14-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 GYO_1045 874421dbb1adaf6bcb841c07c5f58583 470 TIGRFAM TIGR00826 EIIB_glc: PTS system, glucose-like IIB component 29 111 2.0E-24 T 14-10-2018 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 GYO_1045 874421dbb1adaf6bcb841c07c5f58583 470 Pfam PF00367 phosphotransferase system, EIIB 9 42 3.7E-15 T 14-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 GYO_1045 874421dbb1adaf6bcb841c07c5f58583 470 TIGRFAM TIGR01992 PTS-IIBC-Tre: PTS system, trehalose-specific IIBC component 6 465 4.7E-221 T 14-10-2018 IPR011296 Phosphotransferase system, trehalose-specific IIBC component GO:0015574|GO:0015771|GO:0016021 KEGG: 00500+2.7.1.201 GYO_1045 874421dbb1adaf6bcb841c07c5f58583 470 TIGRFAM TIGR00852 pts-Glc: PTS system, maltose and glucose-specific subfamily, IIC component 165 452 5.8E-93 T 14-10-2018 IPR004719 Phosphotransferase system, maltose/glucose-specific subfamily IIC component GO:0008982|GO:0009401|GO:0016021 GYO_2204 9372632f7595fb6ad69405475836e7c1 491 Gene3D G3DSA:3.50.80.20 101 192 1.1E-23 T 14-10-2018 GYO_2204 9372632f7595fb6ad69405475836e7c1 491 SUPERFAMILY SSF56601 36 489 1.93E-99 T 14-10-2018 IPR012338 Beta-lactamase/transpeptidase-like GYO_2204 9372632f7595fb6ad69405475836e7c1 491 Gene3D G3DSA:3.40.710.10 280 491 3.5E-59 T 14-10-2018 GYO_2204 9372632f7595fb6ad69405475836e7c1 491 Pfam PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family 37 490 2.4E-167 T 14-10-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 GYO_2204 9372632f7595fb6ad69405475836e7c1 491 TIGRFAM TIGR00666 PBP4: D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase 64 470 1.4E-162 T 14-10-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 GYO_2204 9372632f7595fb6ad69405475836e7c1 491 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 308 330 1.6E-30 T 14-10-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 GYO_2204 9372632f7595fb6ad69405475836e7c1 491 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 365 379 1.6E-30 T 14-10-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 GYO_2204 9372632f7595fb6ad69405475836e7c1 491 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 447 460 1.6E-30 T 14-10-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 GYO_2204 9372632f7595fb6ad69405475836e7c1 491 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 380 394 1.6E-30 T 14-10-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 GYO_2204 9372632f7595fb6ad69405475836e7c1 491 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 77 96 1.6E-30 T 14-10-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 GYO_2080 70a98157ad5bcfc8640adcb33072e5f9 229 Pfam PF00753 Metallo-beta-lactamase superfamily 31 159 1.1E-5 T 14-10-2018 IPR001279 Metallo-beta-lactamase GYO_2080 70a98157ad5bcfc8640adcb33072e5f9 229 SUPERFAMILY SSF56281 13 181 6.68E-27 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like GYO_2080 70a98157ad5bcfc8640adcb33072e5f9 229 SMART SM00849 30 199 7.3E-8 T 14-10-2018 IPR001279 Metallo-beta-lactamase GYO_2080 70a98157ad5bcfc8640adcb33072e5f9 229 Gene3D G3DSA:3.60.15.10 9 226 1.9E-11 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like GYO_2115 a2a09629863deb7559bbe3c67c824793 499 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 3 246 3.3E-71 T 14-10-2018 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 GYO_2115 a2a09629863deb7559bbe3c67c824793 499 TIGRFAM TIGR01312 XylB: xylulokinase 5 483 6.0E-189 T 14-10-2018 IPR006000 Xylulokinase GO:0004856|GO:0005997 KEGG: 00040+2.7.1.17 GYO_2115 a2a09629863deb7559bbe3c67c824793 499 ProSitePatterns PS00933 FGGY family of carbohydrate kinases signature 1. 131 143 - T 14-10-2018 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 GYO_2115 a2a09629863deb7559bbe3c67c824793 499 Gene3D G3DSA:3.30.420.40 1 246 1.7E-84 T 14-10-2018 GYO_2115 a2a09629863deb7559bbe3c67c824793 499 SUPERFAMILY SSF53067 2 248 9.34E-78 T 14-10-2018 GYO_2115 a2a09629863deb7559bbe3c67c824793 499 ProSitePatterns PS00445 FGGY family of carbohydrate kinases signature 2. 354 374 - T 14-10-2018 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 GYO_2115 a2a09629863deb7559bbe3c67c824793 499 PIRSF PIRSF000538 1 495 2.7E-159 T 14-10-2018 IPR000577 Carbohydrate kinase, FGGY GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 GYO_2115 a2a09629863deb7559bbe3c67c824793 499 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 257 440 2.5E-30 T 14-10-2018 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 GYO_2115 a2a09629863deb7559bbe3c67c824793 499 SUPERFAMILY SSF53067 248 488 1.6E-64 T 14-10-2018 GYO_2115 a2a09629863deb7559bbe3c67c824793 499 Gene3D G3DSA:3.30.420.40 248 490 6.4E-75 T 14-10-2018 GYO_3758 a878a961099b4d0bbff3e4ac730f723b 388 PIRSF PIRSF000390 1 379 1.6E-117 T 14-10-2018 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase GYO_3758 a878a961099b4d0bbff3e4ac730f723b 388 Gene3D G3DSA:3.90.1150.10 251 384 1.5E-38 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 GYO_3758 a878a961099b4d0bbff3e4ac730f723b 388 SUPERFAMILY SSF53383 4 375 5.78E-104 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase GYO_3758 a878a961099b4d0bbff3e4ac730f723b 388 Gene3D G3DSA:3.40.640.10 1 249 1.4E-86 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 GYO_3758 a878a961099b4d0bbff3e4ac730f723b 388 Pfam PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family 15 371 5.4E-97 T 14-10-2018 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase GYO_0998 6caf8ecbe62e6eb4aebbbd8f010274f3 485 Gene3D G3DSA:3.40.605.10 12 472 2.0E-151 T 14-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 GYO_0998 6caf8ecbe62e6eb4aebbbd8f010274f3 485 Gene3D G3DSA:3.40.309.10 257 444 2.0E-151 T 14-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 GYO_0998 6caf8ecbe62e6eb4aebbbd8f010274f3 485 Pfam PF00171 Aldehyde dehydrogenase family 16 474 1.1E-156 T 14-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 GYO_0998 6caf8ecbe62e6eb4aebbbd8f010274f3 485 SUPERFAMILY SSF53720 6 478 1.44E-149 T 14-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 GYO_0998 6caf8ecbe62e6eb4aebbbd8f010274f3 485 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 252 259 - T 14-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 GYO_1362 bd2a1bda3cbb9c9674563d24aac13c26 400 SUPERFAMILY SSF103473 16 393 2.75E-54 T 14-10-2018 IPR036259 MFS transporter superfamily GYO_1362 bd2a1bda3cbb9c9674563d24aac13c26 400 Gene3D G3DSA:1.20.1250.20 8 246 1.6E-28 T 14-10-2018 GYO_1362 bd2a1bda3cbb9c9674563d24aac13c26 400 Gene3D G3DSA:1.20.1720.10 247 398 6.0E-14 T 14-10-2018 GYO_1362 bd2a1bda3cbb9c9674563d24aac13c26 400 Pfam PF07690 Major Facilitator Superfamily 248 397 6.9E-16 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 GYO_1362 bd2a1bda3cbb9c9674563d24aac13c26 400 Pfam PF07690 Major Facilitator Superfamily 20 233 2.1E-24 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 GYO_4449 7e77e7b8dfc2858240ed91123e929dfe 401 Gene3D G3DSA:2.40.10.10 67 176 1.8E-25 T 14-10-2018 GYO_4449 7e77e7b8dfc2858240ed91123e929dfe 401 Gene3D G3DSA:2.30.42.10 299 398 1.2E-24 T 14-10-2018 GYO_4449 7e77e7b8dfc2858240ed91123e929dfe 401 SMART SM00228 296 384 4.1E-10 T 14-10-2018 IPR001478 PDZ domain GO:0005515 GYO_4449 7e77e7b8dfc2858240ed91123e929dfe 401 Pfam PF13180 PDZ domain 296 393 6.4E-21 T 14-10-2018 IPR001478 PDZ domain GO:0005515 GYO_4449 7e77e7b8dfc2858240ed91123e929dfe 401 Pfam PF13365 Trypsin-like peptidase domain 111 258 5.9E-32 T 14-10-2018 GYO_4449 7e77e7b8dfc2858240ed91123e929dfe 401 SUPERFAMILY SSF50156 295 393 6.74E-18 T 14-10-2018 IPR036034 PDZ superfamily GO:0005515 GYO_4449 7e77e7b8dfc2858240ed91123e929dfe 401 PRINTS PR00834 HtrA/DegQ protease family signature 229 246 6.6E-37 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 GYO_4449 7e77e7b8dfc2858240ed91123e929dfe 401 PRINTS PR00834 HtrA/DegQ protease family signature 342 354 6.6E-37 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 GYO_4449 7e77e7b8dfc2858240ed91123e929dfe 401 PRINTS PR00834 HtrA/DegQ protease family signature 123 135 6.6E-37 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 GYO_4449 7e77e7b8dfc2858240ed91123e929dfe 401 PRINTS PR00834 HtrA/DegQ protease family signature 185 209 6.6E-37 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 GYO_4449 7e77e7b8dfc2858240ed91123e929dfe 401 PRINTS PR00834 HtrA/DegQ protease family signature 251 268 6.6E-37 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 GYO_4449 7e77e7b8dfc2858240ed91123e929dfe 401 PRINTS PR00834 HtrA/DegQ protease family signature 144 164 6.6E-37 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 GYO_4449 7e77e7b8dfc2858240ed91123e929dfe 401 Gene3D G3DSA:2.40.10.10 177 298 4.3E-38 T 14-10-2018 GYO_4449 7e77e7b8dfc2858240ed91123e929dfe 401 SUPERFAMILY SSF50494 78 293 3.22E-54 T 14-10-2018 IPR009003 Peptidase S1, PA clan GYO_4093 12bd4c6c8e57cbd260b4b64117c704d3 535 Pfam PF00117 Glutamine amidotransferase class-I 302 526 2.2E-60 T 14-10-2018 IPR017926 Glutamine amidotransferase GYO_4093 12bd4c6c8e57cbd260b4b64117c704d3 535 Hamap MF_01227 CTP synthase [pyrG]. 2 532 53.431 T 14-10-2018 IPR004468 CTP synthase GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: R-HSA-499943 GYO_4093 12bd4c6c8e57cbd260b4b64117c704d3 535 Pfam PF06418 CTP synthase N-terminus 3 267 3.8E-131 T 14-10-2018 IPR017456 CTP synthase, N-terminal GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: R-HSA-499943 GYO_4093 12bd4c6c8e57cbd260b4b64117c704d3 535 TIGRFAM TIGR00337 PyrG: CTP synthase 1 527 6.3E-273 T 14-10-2018 IPR004468 CTP synthase GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: R-HSA-499943 GYO_4093 12bd4c6c8e57cbd260b4b64117c704d3 535 SUPERFAMILY SSF52317 290 531 1.14E-84 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like GYO_4093 12bd4c6c8e57cbd260b4b64117c704d3 535 Gene3D G3DSA:3.40.50.300 1 286 4.2E-136 T 14-10-2018 GYO_4093 12bd4c6c8e57cbd260b4b64117c704d3 535 SUPERFAMILY SSF52540 1 270 2.66E-127 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase GYO_4093 12bd4c6c8e57cbd260b4b64117c704d3 535 Gene3D G3DSA:3.40.50.880 287 535 4.5E-105 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like GYO_1429 b1de4468fe6472fd98766d60a005a558 319 Gene3D G3DSA:3.40.50.1370 138 297 4.6E-125 T 14-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 GYO_1429 b1de4468fe6472fd98766d60a005a558 319 Gene3D G3DSA:3.40.50.1370 13 306 4.6E-125 T 14-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 GYO_1429 b1de4468fe6472fd98766d60a005a558 319 PRINTS PR00102 Ornithine carbamoyltransferase signature 84 97 7.6E-30 T 14-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 GYO_1429 b1de4468fe6472fd98766d60a005a558 319 PRINTS PR00102 Ornithine carbamoyltransferase signature 227 237 7.6E-30 T 14-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 GYO_1429 b1de4468fe6472fd98766d60a005a558 319 PRINTS PR00102 Ornithine carbamoyltransferase signature 124 138 7.6E-30 T 14-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 GYO_1429 b1de4468fe6472fd98766d60a005a558 319 PRINTS PR00102 Ornithine carbamoyltransferase signature 51 65 7.6E-30 T 14-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 GYO_1429 b1de4468fe6472fd98766d60a005a558 319 PRINTS PR00102 Ornithine carbamoyltransferase signature 289 300 7.6E-30 T 14-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 GYO_1429 b1de4468fe6472fd98766d60a005a558 319 Pfam PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain 154 308 5.3E-59 T 14-10-2018 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain GO:0006520|GO:0016597|GO:0016743 GYO_1429 b1de4468fe6472fd98766d60a005a558 319 SUPERFAMILY SSF53671 8 310 9.82E-112 T 14-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 GYO_1429 b1de4468fe6472fd98766d60a005a558 319 TIGRFAM TIGR00658 orni_carb_tr: ornithine carbamoyltransferase 12 310 3.3E-131 T 14-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 GYO_1429 b1de4468fe6472fd98766d60a005a558 319 Pfam PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain 12 148 5.8E-54 T 14-10-2018 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding GO:0006520|GO:0016743 GYO_1429 b1de4468fe6472fd98766d60a005a558 319 Hamap MF_01109 Ornithine carbamoyltransferase, catabolic [argI]. 11 311 80.675 T 14-10-2018 IPR024904 Ornithine carbamoyltransferase GO:0004585|GO:0006591 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 GYO_1429 b1de4468fe6472fd98766d60a005a558 319 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 53 72 3.5E-28 T 14-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 GYO_1429 b1de4468fe6472fd98766d60a005a558 319 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 135 146 3.5E-28 T 14-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 GYO_1429 b1de4468fe6472fd98766d60a005a558 319 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 275 298 3.5E-28 T 14-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 GYO_1429 b1de4468fe6472fd98766d60a005a558 319 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 263 272 3.5E-28 T 14-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 GYO_1429 b1de4468fe6472fd98766d60a005a558 319 ProSitePatterns PS00097 Aspartate and ornithine carbamoyltransferases signature. 53 60 - T 14-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 GYO_3704 5bc97dd82169f20c9966fc7b8e6e39f7 305 Gene3D G3DSA:3.40.190.10 37 299 5.3E-101 T 14-10-2018 GYO_3704 5bc97dd82169f20c9966fc7b8e6e39f7 305 Pfam PF04069 Substrate binding domain of ABC-type glycine betaine transport system 35 300 7.9E-63 T 14-10-2018 IPR007210 ABC-type glycine betaine transport system, substrate-binding domain GO:0022857|GO:0043190|GO:0055085 GYO_3704 5bc97dd82169f20c9966fc7b8e6e39f7 305 Gene3D G3DSA:3.40.190.120 139 243 5.3E-101 T 14-10-2018 GYO_3704 5bc97dd82169f20c9966fc7b8e6e39f7 305 SUPERFAMILY SSF53850 34 303 2.33E-69 T 14-10-2018 GYO_2556 e20267d630c8dee703e527111ff5ec79 174 SUPERFAMILY SSF140663 2 129 1.31E-34 T 14-10-2018 IPR023203 TTHA0068-like superfamily GYO_2556 e20267d630c8dee703e527111ff5ec79 174 Pfam PF03745 Domain of unknown function (DUF309) 7 66 1.6E-22 T 14-10-2018 IPR005500 Protein of unknown function DUF309 GYO_2556 e20267d630c8dee703e527111ff5ec79 174 Gene3D G3DSA:1.20.58.500 5 100 4.1E-16 T 14-10-2018 GYO_3871 8c73f0bc5d93d1101850154253ced0fe 327 Hamap MF_00094 Peptide chain release factor 2 [prfB]. 1 326 37.825 T 14-10-2018 IPR004374 Peptide chain release factor 2 GO:0005737|GO:0006415|GO:0016149 GYO_3871 8c73f0bc5d93d1101850154253ced0fe 327 SMART SM00937 45 155 6.0E-59 T 14-10-2018 IPR005139 Peptide chain release factor GO:0006415 GYO_3871 8c73f0bc5d93d1101850154253ced0fe 327 ProSitePatterns PS00745 Prokaryotic-type class I peptide chain release factors signature. 205 221 - T 14-10-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 GYO_3871 8c73f0bc5d93d1101850154253ced0fe 327 Pfam PF00472 RF-1 domain 188 298 1.1E-43 T 14-10-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 GYO_3871 8c73f0bc5d93d1101850154253ced0fe 327 Pfam PF03462 PCRF domain 1 179 9.2E-61 T 14-10-2018 IPR005139 Peptide chain release factor GO:0006415 GYO_3871 8c73f0bc5d93d1101850154253ced0fe 327 Gene3D G3DSA:3.30.70.1660 90 319 4.9E-99 T 14-10-2018 GYO_3871 8c73f0bc5d93d1101850154253ced0fe 327 Gene3D G3DSA:1.20.58.410 1 83 1.7E-17 T 14-10-2018 GYO_3871 8c73f0bc5d93d1101850154253ced0fe 327 Gene3D G3DSA:3.30.160.20 186 281 4.9E-99 T 14-10-2018 GYO_3871 8c73f0bc5d93d1101850154253ced0fe 327 TIGRFAM TIGR00020 prfB: peptide chain release factor 2 1 325 2.9E-175 T 14-10-2018 IPR004374 Peptide chain release factor 2 GO:0005737|GO:0006415|GO:0016149 GYO_3871 8c73f0bc5d93d1101850154253ced0fe 327 SUPERFAMILY SSF75620 1 324 1.96E-136 T 14-10-2018 GYO_4062 b65d78dfbc7736767f3a0df40366908b 244 ProSitePatterns PS00449 ATP synthase a subunit signature. 165 174 - T 14-10-2018 IPR023011 ATP synthase, F0 complex, subunit A, active site Reactome: R-HSA-163210|Reactome: R-HSA-8949613 GYO_4062 b65d78dfbc7736767f3a0df40366908b 244 Hamap MF_01393 ATP synthase subunit a [atpB]. 8 243 14.381 T 14-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 GYO_4062 b65d78dfbc7736767f3a0df40366908b 244 TIGRFAM TIGR01131 ATP_synt_6_or_A: ATP synthase F0, A subunit 11 239 6.2E-54 T 14-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 GYO_4062 b65d78dfbc7736767f3a0df40366908b 244 SUPERFAMILY SSF81336 72 237 5.1E-42 T 14-10-2018 IPR035908 ATP synthase, F0 complex, subunit A superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 GYO_4062 b65d78dfbc7736767f3a0df40366908b 244 Gene3D G3DSA:1.20.120.220 70 244 1.0E-41 T 14-10-2018 IPR035908 ATP synthase, F0 complex, subunit A superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 GYO_4062 b65d78dfbc7736767f3a0df40366908b 244 Pfam PF00119 ATP synthase A chain 20 237 5.4E-59 T 14-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 GYO_4062 b65d78dfbc7736767f3a0df40366908b 244 PRINTS PR00123 ATP synthase A subunit signature 78 94 1.2E-18 T 14-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 GYO_4062 b65d78dfbc7736767f3a0df40366908b 244 PRINTS PR00123 ATP synthase A subunit signature 146 161 1.2E-18 T 14-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 GYO_4062 b65d78dfbc7736767f3a0df40366908b 244 PRINTS PR00123 ATP synthase A subunit signature 162 184 1.2E-18 T 14-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 GYO_4062 b65d78dfbc7736767f3a0df40366908b 244 PRINTS PR00123 ATP synthase A subunit signature 223 238 1.2E-18 T 14-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 GYO_3245 b0346f7779b40b132d9edfad5301f8f7 311 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 10 294 9.2E-72 T 14-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme GYO_3245 b0346f7779b40b132d9edfad5301f8f7 311 Gene3D G3DSA:3.40.50.1100 10 303 6.5E-119 T 14-10-2018 GYO_3245 b0346f7779b40b132d9edfad5301f8f7 311 TIGRFAM TIGR01139 cysK: cysteine synthase A 9 308 1.2E-139 T 14-10-2018 IPR005859 Cysteine synthase CysK GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936 GYO_3245 b0346f7779b40b132d9edfad5301f8f7 311 SUPERFAMILY SSF53686 3 308 2.75E-100 T 14-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme GYO_3245 b0346f7779b40b132d9edfad5301f8f7 311 Gene3D G3DSA:3.40.50.1100 46 147 6.5E-119 T 14-10-2018 GYO_3245 b0346f7779b40b132d9edfad5301f8f7 311 TIGRFAM TIGR01136 cysKM: cysteine synthase 9 308 5.9E-130 T 14-10-2018 IPR005856 Cysteine synthase GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936 GYO_3245 b0346f7779b40b132d9edfad5301f8f7 311 ProSitePatterns PS00901 Cysteine synthase/cystathionine beta-synthase P-phosphate attachment site. 34 52 - T 14-10-2018 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site GO:0006535 GYO_1825 4afcfdcb56f1a7358e2faedb2338a794 309 Hamap MF_00313 Glutaminase [glsA]. 5 309 46.685 T 14-10-2018 IPR015868 Glutaminase GO:0004359|GO:0006541 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|Reactome: R-HSA-210500|Reactome: R-HSA-5628897|Reactome: R-HSA-70614 GYO_1825 4afcfdcb56f1a7358e2faedb2338a794 309 TIGRFAM TIGR03814 Gln_ase: glutaminase A 9 309 2.5E-125 T 14-10-2018 IPR015868 Glutaminase GO:0004359|GO:0006541 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|Reactome: R-HSA-210500|Reactome: R-HSA-5628897|Reactome: R-HSA-70614 GYO_1825 4afcfdcb56f1a7358e2faedb2338a794 309 SUPERFAMILY SSF56601 8 309 7.64E-116 T 14-10-2018 IPR012338 Beta-lactamase/transpeptidase-like GYO_1825 4afcfdcb56f1a7358e2faedb2338a794 309 Pfam PF04960 Glutaminase 23 309 5.2E-113 T 14-10-2018 IPR015868 Glutaminase GO:0004359|GO:0006541 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|Reactome: R-HSA-210500|Reactome: R-HSA-5628897|Reactome: R-HSA-70614 GYO_1825 4afcfdcb56f1a7358e2faedb2338a794 309 Gene3D G3DSA:3.40.710.10 3 309 2.1E-114 T 14-10-2018 GYO_1296 7817e2f600174e04d59a9bccd690d9f7 359 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 185 204 - T 14-10-2018 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site GYO_1296 7817e2f600174e04d59a9bccd690d9f7 359 Gene3D G3DSA:3.40.640.10 16 255 1.0E-83 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 GYO_1296 7817e2f600174e04d59a9bccd690d9f7 359 PIRSF PIRSF000525 1 359 6.1E-153 T 14-10-2018 IPR022278 Phosphoserine aminotransferase GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52|Reactome: R-HSA-977347 GYO_1296 7817e2f600174e04d59a9bccd690d9f7 359 TIGRFAM TIGR01364 serC_1: phosphoserine transaminase 5 357 2.0E-156 T 14-10-2018 IPR022278 Phosphoserine aminotransferase GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52|Reactome: R-HSA-977347 GYO_1296 7817e2f600174e04d59a9bccd690d9f7 359 SUPERFAMILY SSF53383 1 357 1.21E-110 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase GYO_1296 7817e2f600174e04d59a9bccd690d9f7 359 Pfam PF00266 Aminotransferase class-V 6 347 9.5E-48 T 14-10-2018 IPR000192 Aminotransferase class V domain GYO_1296 7817e2f600174e04d59a9bccd690d9f7 359 Gene3D G3DSA:3.90.1150.10 256 358 6.8E-42 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 GYO_1296 7817e2f600174e04d59a9bccd690d9f7 359 Hamap MF_00160 Phosphoserine aminotransferase [serC]. 2 358 48.46 T 14-10-2018 IPR022278 Phosphoserine aminotransferase GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52|Reactome: R-HSA-977347 GYO_3614 66479e740f25a535de38e1b8042fe1f7 211 ProSitePatterns PS00622 LuxR-type HTH domain signature. 164 191 - T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 GYO_3614 66479e740f25a535de38e1b8042fe1f7 211 SMART SM00421 147 204 3.4E-30 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 GYO_3614 66479e740f25a535de38e1b8042fe1f7 211 SMART SM00448 2 115 3.0E-29 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 GYO_3614 66479e740f25a535de38e1b8042fe1f7 211 SUPERFAMILY SSF46894 136 210 2.28E-24 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 GYO_3614 66479e740f25a535de38e1b8042fe1f7 211 Gene3D G3DSA:3.40.50.12740 2 210 5.0E-74 T 14-10-2018 GYO_3614 66479e740f25a535de38e1b8042fe1f7 211 SUPERFAMILY SSF52172 2 131 8.54E-33 T 14-10-2018 IPR011006 CheY-like superfamily GYO_3614 66479e740f25a535de38e1b8042fe1f7 211 Pfam PF00072 Response regulator receiver domain 4 115 1.7E-26 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 GYO_3614 66479e740f25a535de38e1b8042fe1f7 211 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 150 164 9.2E-16 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 GYO_3614 66479e740f25a535de38e1b8042fe1f7 211 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 164 180 9.2E-16 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 GYO_3614 66479e740f25a535de38e1b8042fe1f7 211 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 180 192 9.2E-16 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 GYO_3614 66479e740f25a535de38e1b8042fe1f7 211 Pfam PF00196 Bacterial regulatory proteins, luxR family 149 204 1.4E-22 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 GYO_2917 aa70b6e4b1e1825d3bf8f38e4778c3b4 607 SMART SM00014 195 310 2.6E-5 T 14-10-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase GYO_2917 aa70b6e4b1e1825d3bf8f38e4778c3b4 607 Gene3D G3DSA:1.20.144.10 155 340 1.3E-47 T 14-10-2018 GYO_2917 aa70b6e4b1e1825d3bf8f38e4778c3b4 607 Pfam PF12951 Passenger-associated-transport-repeat 459 487 1.2E-11 T 14-10-2018 IPR013425 Autotransporter-associated beta strand repeat GYO_2917 aa70b6e4b1e1825d3bf8f38e4778c3b4 607 TIGRFAM TIGR02601 autotrns_rpt: autotransporter-associated beta strand repeat 459 487 1.9E-12 T 14-10-2018 IPR013425 Autotransporter-associated beta strand repeat GYO_2917 aa70b6e4b1e1825d3bf8f38e4778c3b4 607 SUPERFAMILY SSF48317 196 327 8.76E-29 T 14-10-2018 IPR036938 Phosphatidic acid phosphatase type 2/haloperoxidase superfamily GYO_2917 aa70b6e4b1e1825d3bf8f38e4778c3b4 607 Pfam PF01569 PAP2 superfamily 205 311 2.4E-15 T 14-10-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase GYO_2917 aa70b6e4b1e1825d3bf8f38e4778c3b4 607 SUPERFAMILY SSF51126 432 568 1.73E-7 T 14-10-2018 IPR011050 Pectin lyase fold/virulence factor GYO_0485 907e6cf30e3272e3fd4894120341d1d7 258 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 14 251 1.2E-66 T 14-10-2018 GYO_0485 907e6cf30e3272e3fd4894120341d1d7 258 Gene3D G3DSA:3.40.50.720 1 257 1.0E-81 T 14-10-2018 GYO_0485 907e6cf30e3272e3fd4894120341d1d7 258 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 84 95 4.4E-11 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR GYO_0485 907e6cf30e3272e3fd4894120341d1d7 258 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 159 178 4.4E-11 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR GYO_0485 907e6cf30e3272e3fd4894120341d1d7 258 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 139 147 4.4E-11 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR GYO_0485 907e6cf30e3272e3fd4894120341d1d7 258 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 146 174 - T 14-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 GYO_0485 907e6cf30e3272e3fd4894120341d1d7 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 159 178 1.5E-40 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR GYO_0485 907e6cf30e3272e3fd4894120341d1d7 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 84 95 1.5E-40 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR GYO_0485 907e6cf30e3272e3fd4894120341d1d7 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 180 197 1.5E-40 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR GYO_0485 907e6cf30e3272e3fd4894120341d1d7 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 9 26 1.5E-40 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR GYO_0485 907e6cf30e3272e3fd4894120341d1d7 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 214 234 1.5E-40 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR GYO_0485 907e6cf30e3272e3fd4894120341d1d7 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 133 149 1.5E-40 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR GYO_0485 907e6cf30e3272e3fd4894120341d1d7 258 SUPERFAMILY SSF51735 7 253 1.51E-83 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily GYO_0423 7359a716d32c41fdbbdc69999d6a5af6 312 ProSitePatterns PS00672 Serine proteases, V8 family, histidine active site. 131 145 - T 14-10-2018 IPR028301 Serine proteases, V8 family, histidine active site GYO_0423 7359a716d32c41fdbbdc69999d6a5af6 312 PRINTS PR00839 V8 serine protease family signature 160 172 2.8E-31 T 14-10-2018 IPR008256 Peptidase S1B GO:0006508|GO:0008236 GYO_0423 7359a716d32c41fdbbdc69999d6a5af6 312 PRINTS PR00839 V8 serine protease family signature 100 117 2.8E-31 T 14-10-2018 IPR008256 Peptidase S1B GO:0006508|GO:0008236 GYO_0423 7359a716d32c41fdbbdc69999d6a5af6 312 PRINTS PR00839 V8 serine protease family signature 130 147 2.8E-31 T 14-10-2018 IPR008256 Peptidase S1B GO:0006508|GO:0008236 GYO_0423 7359a716d32c41fdbbdc69999d6a5af6 312 PRINTS PR00839 V8 serine protease family signature 276 288 2.8E-31 T 14-10-2018 IPR008256 Peptidase S1B GO:0006508|GO:0008236 GYO_0423 7359a716d32c41fdbbdc69999d6a5af6 312 PRINTS PR00839 V8 serine protease family signature 255 271 2.8E-31 T 14-10-2018 IPR008256 Peptidase S1B GO:0006508|GO:0008236 GYO_0423 7359a716d32c41fdbbdc69999d6a5af6 312 PRINTS PR00839 V8 serine protease family signature 222 235 2.8E-31 T 14-10-2018 IPR008256 Peptidase S1B GO:0006508|GO:0008236 GYO_0423 7359a716d32c41fdbbdc69999d6a5af6 312 Gene3D G3DSA:2.40.10.10 95 288 4.3E-58 T 14-10-2018 GYO_0423 7359a716d32c41fdbbdc69999d6a5af6 312 ProSitePatterns PS00673 Serine proteases, V8 family, serine active site. 261 271 - T 14-10-2018 IPR000126 Serine proteases, V8 family, serine active site GO:0006508|GO:0008236 GYO_0423 7359a716d32c41fdbbdc69999d6a5af6 312 ProSitePatterns PS00134 Serine proteases, trypsin family, histidine active site. 141 146 - T 14-10-2018 IPR018114 Serine proteases, trypsin family, histidine active site GO:0004252|GO:0006508 GYO_0423 7359a716d32c41fdbbdc69999d6a5af6 312 Pfam PF00089 Trypsin 105 307 1.2E-24 T 14-10-2018 IPR001254 Serine proteases, trypsin domain GO:0004252|GO:0006508 GYO_0423 7359a716d32c41fdbbdc69999d6a5af6 312 SUPERFAMILY SSF50494 89 309 2.74E-34 T 14-10-2018 IPR009003 Peptidase S1, PA clan GYO_0423 7359a716d32c41fdbbdc69999d6a5af6 312 Gene3D G3DSA:2.40.10.10 110 211 4.3E-58 T 14-10-2018 GYO_0920 250ee5547da6e71d4891979b57df59cc 525 Gene3D G3DSA:3.20.20.70 114 524 2.3E-97 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 GYO_0920 250ee5547da6e71d4891979b57df59cc 525 SUPERFAMILY SSF51395 11 520 5.8E-107 T 14-10-2018 GYO_0920 250ee5547da6e71d4891979b57df59cc 525 Pfam PF01645 Conserved region in glutamate synthase 116 494 3.9E-129 T 14-10-2018 IPR002932 Glutamate synthase domain GO:0006537|GO:0015930|GO:0016638|GO:0055114 GYO_0920 250ee5547da6e71d4891979b57df59cc 525 PIRSF PIRSF500060 1 524 1.3E-218 T 14-10-2018 IPR027283 Glutamate synthase large subunit-like protein, bacteria GYO_0920 250ee5547da6e71d4891979b57df59cc 525 PIRSF PIRSF006429 1 524 6.7E-167 T 14-10-2018 IPR024188 Glutamate synthase large subunit-like protein GYO_2060 5b24fb3149f168a7c38843ffe634816c 630 SUPERFAMILY SSF54211 192 328 7.21E-36 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold GYO_2060 5b24fb3149f168a7c38843ffe634816c 630 ProSitePatterns PS00058 DNA mismatch repair proteins mutL / hexB / PMS1 signature. 96 102 - T 14-10-2018 IPR014762 DNA mismatch repair, conserved site GYO_2060 5b24fb3149f168a7c38843ffe634816c 630 Gene3D G3DSA:3.30.1370.100 486 579 1.3E-67 T 14-10-2018 GYO_2060 5b24fb3149f168a7c38843ffe634816c 630 SMART SM01340 210 328 5.2E-51 T 14-10-2018 IPR013507 DNA mismatch repair protein, S5 domain 2-like GO:0005524|GO:0006298|GO:0030983 GYO_2060 5b24fb3149f168a7c38843ffe634816c 630 SUPERFAMILY SSF118116 440 628 3.4E-54 T 14-10-2018 IPR037198 MutL, C-terminal domain superfamily GYO_2060 5b24fb3149f168a7c38843ffe634816c 630 SMART SM00853 444 586 4.0E-54 T 14-10-2018 IPR014790 MutL, C-terminal, dimerisation GO:0005524|GO:0006298 GYO_2060 5b24fb3149f168a7c38843ffe634816c 630 Gene3D G3DSA:3.30.230.10 215 327 1.1E-30 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup GYO_2060 5b24fb3149f168a7c38843ffe634816c 630 Gene3D G3DSA:3.30.565.10 2 214 1.7E-63 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily GYO_2060 5b24fb3149f168a7c38843ffe634816c 630 SUPERFAMILY SSF55874 6 215 2.36E-52 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily GYO_2060 5b24fb3149f168a7c38843ffe634816c 630 Pfam PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 27 124 2.2E-12 T 14-10-2018 GYO_2060 5b24fb3149f168a7c38843ffe634816c 630 Pfam PF08676 MutL C terminal dimerisation domain 445 586 6.3E-47 T 14-10-2018 IPR014790 MutL, C-terminal, dimerisation GO:0005524|GO:0006298 GYO_2060 5b24fb3149f168a7c38843ffe634816c 630 Pfam PF01119 DNA mismatch repair protein, C-terminal domain 211 326 4.1E-35 T 14-10-2018 IPR013507 DNA mismatch repair protein, S5 domain 2-like GO:0005524|GO:0006298|GO:0030983 GYO_2060 5b24fb3149f168a7c38843ffe634816c 630 Gene3D G3DSA:2.30.42.20 445 628 1.3E-67 T 14-10-2018 GYO_2060 5b24fb3149f168a7c38843ffe634816c 630 TIGRFAM TIGR00585 mutl: DNA mismatch repair protein MutL 5 308 2.8E-101 T 14-10-2018 IPR002099 DNA mismatch repair protein family, N-terminal GO:0005524|GO:0006298|GO:0030983 GYO_2060 5b24fb3149f168a7c38843ffe634816c 630 Hamap MF_00149 DNA mismatch repair protein MutL [mutL]. 4 626 27.754 T 14-10-2018 IPR020667 DNA mismatch repair protein, MutL GO:0006298 GYO_4502 67f1dafc7a8f17ddacd095310ebe9c27 252 ProSitePatterns PS00728 AP endonucleases family 1 signature 3. 211 222 - T 14-10-2018 IPR020848 AP endonuclease 1, conserved site GO:0003677|GO:0004519|GO:0005622|GO:0006281 Reactome: R-HSA-110357|Reactome: R-HSA-110362|Reactome: R-HSA-110373|Reactome: R-HSA-5651801|Reactome: R-HSA-73930|Reactome: R-HSA-73933 GYO_4502 67f1dafc7a8f17ddacd095310ebe9c27 252 Gene3D G3DSA:3.60.10.10 1 251 1.1E-98 T 14-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily GYO_4502 67f1dafc7a8f17ddacd095310ebe9c27 252 TIGRFAM TIGR00195 exoDNase_III: exodeoxyribonuclease III 1 250 1.2E-108 T 14-10-2018 GYO_4502 67f1dafc7a8f17ddacd095310ebe9c27 252 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 5 243 2.2E-25 T 14-10-2018 IPR005135 Endonuclease/exonuclease/phosphatase GYO_4502 67f1dafc7a8f17ddacd095310ebe9c27 252 ProSitePatterns PS00726 AP endonucleases family 1 signature 1. 29 38 - T 14-10-2018 IPR020847 AP endonuclease 1, binding site GO:0003677|GO:0004519|GO:0005622|GO:0006281 GYO_4502 67f1dafc7a8f17ddacd095310ebe9c27 252 SUPERFAMILY SSF56219 1 251 1.31E-82 T 14-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily GYO_4502 67f1dafc7a8f17ddacd095310ebe9c27 252 TIGRFAM TIGR00633 xth: exodeoxyribonuclease III (xth) 1 250 1.7E-105 T 14-10-2018 IPR004808 AP endonuclease 1 GO:0004518|GO:0006281 GYO_4502 67f1dafc7a8f17ddacd095310ebe9c27 252 ProSitePatterns PS00727 AP endonucleases family 1 signature 2. 185 201 - T 14-10-2018 IPR020848 AP endonuclease 1, conserved site GO:0003677|GO:0004519|GO:0005622|GO:0006281 Reactome: R-HSA-110357|Reactome: R-HSA-110362|Reactome: R-HSA-110373|Reactome: R-HSA-5651801|Reactome: R-HSA-73930|Reactome: R-HSA-73933 GYO_1365 b4037e5f550441388390aefaed0d3255 145 Gene3D G3DSA:1.20.120.660 73 144 9.3E-12 T 14-10-2018 GYO_1365 b4037e5f550441388390aefaed0d3255 145 Gene3D G3DSA:1.20.120.660 11 72 1.3E-7 T 14-10-2018 GYO_1365 b4037e5f550441388390aefaed0d3255 145 Pfam PF02915 Rubrerythrin 21 138 3.4E-12 T 14-10-2018 IPR003251 Rubrerythrin GO:0016491|GO:0046872|GO:0055114 GYO_1365 b4037e5f550441388390aefaed0d3255 145 SUPERFAMILY SSF47240 15 143 5.47E-27 T 14-10-2018 IPR009078 Ferritin-like superfamily GYO_1941 68e65dfb2c76d582a8aa59f8934f404c 246 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 5 185 1.4E-6 T 14-10-2018 GYO_1941 68e65dfb2c76d582a8aa59f8934f404c 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 81 92 3.6E-48 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR GYO_1941 68e65dfb2c76d582a8aa59f8934f404c 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 208 228 3.6E-48 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR GYO_1941 68e65dfb2c76d582a8aa59f8934f404c 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 128 144 3.6E-48 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR GYO_1941 68e65dfb2c76d582a8aa59f8934f404c 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 175 192 3.6E-48 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR GYO_1941 68e65dfb2c76d582a8aa59f8934f404c 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 154 173 3.6E-48 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR GYO_1941 68e65dfb2c76d582a8aa59f8934f404c 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 6 23 3.6E-48 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR GYO_1941 68e65dfb2c76d582a8aa59f8934f404c 246 SUPERFAMILY SSF51735 4 246 1.86E-94 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily GYO_1941 68e65dfb2c76d582a8aa59f8934f404c 246 Gene3D G3DSA:3.40.50.720 4 246 2.5E-93 T 14-10-2018 GYO_1941 68e65dfb2c76d582a8aa59f8934f404c 246 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 11 244 1.7E-72 T 14-10-2018 GYO_1941 68e65dfb2c76d582a8aa59f8934f404c 246 TIGRFAM TIGR01830 3oxo_ACP_reduc: 3-oxoacyl-[acyl-carrier-protein] reductase 7 245 8.9E-111 T 14-10-2018 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase GO:0004316|GO:0006633|GO:0051287|GO:0055114 KEGG: 00061+1.1.1.100|KEGG: 00780+1.1.1.100|MetaCyc: PWY-5367|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 GYO_1941 68e65dfb2c76d582a8aa59f8934f404c 246 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 154 173 6.3E-15 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR GYO_1941 68e65dfb2c76d582a8aa59f8934f404c 246 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 134 142 6.3E-15 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR GYO_1941 68e65dfb2c76d582a8aa59f8934f404c 246 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 81 92 6.3E-15 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR GYO_2471 e34b8461ff14521c4d3d3b92a783429e 325 TIGRFAM TIGR00122 birA_repr_reg: biotin operon repressor 7 77 1.5E-29 T 14-10-2018 IPR004409 Biotin operon repressor, helix-turn-helix domain GO:0006355 KEGG: 00780+6.3.4.15 GYO_2471 e34b8461ff14521c4d3d3b92a783429e 325 Gene3D G3DSA:2.30.30.100 281 325 3.8E-7 T 14-10-2018 GYO_2471 e34b8461ff14521c4d3d3b92a783429e 325 Gene3D G3DSA:1.10.10.10 1 65 3.0E-21 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily GYO_2471 e34b8461ff14521c4d3d3b92a783429e 325 TIGRFAM TIGR00121 birA_ligase: biotin--[acetyl-CoA-carboxylase] ligase 86 324 4.6E-90 T 14-10-2018 IPR004408 Biotin--acetyl-CoA-carboxylase ligase GO:0004077|GO:0006464 KEGG: 00780+6.3.4.15|Reactome: R-HSA-196780|Reactome: R-HSA-3371599 GYO_2471 e34b8461ff14521c4d3d3b92a783429e 325 Hamap MF_00978 Bifunctional ligase/repressor BirA [birA]. 8 325 37.52 T 14-10-2018 IPR030855 Bifunctional ligase/repressor BirA GO:0004077|GO:0006355 KEGG: 00780+6.3.4.15 GYO_2471 e34b8461ff14521c4d3d3b92a783429e 325 Gene3D G3DSA:3.30.930.10 69 278 3.5E-68 T 14-10-2018 GYO_2471 e34b8461ff14521c4d3d3b92a783429e 325 Pfam PF08279 HTH domain 6 60 3.8E-16 T 14-10-2018 IPR013196 Helix-turn-helix, type 11 GYO_2471 e34b8461ff14521c4d3d3b92a783429e 325 SUPERFAMILY SSF50037 286 324 5.95E-5 T 14-10-2018 IPR008988 Transcriptional repressor, C-terminal GYO_2471 e34b8461ff14521c4d3d3b92a783429e 325 SUPERFAMILY SSF55681 72 277 1.41E-61 T 14-10-2018 GYO_2471 e34b8461ff14521c4d3d3b92a783429e 325 Pfam PF03099 Biotin/lipoate A/B protein ligase family 90 214 1.2E-20 T 14-10-2018 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain GO:0006464 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382 GYO_2471 e34b8461ff14521c4d3d3b92a783429e 325 Pfam PF02237 Biotin protein ligase C terminal domain 285 325 1.5E-10 T 14-10-2018 IPR003142 Biotin protein ligase, C-terminal GO:0006464 KEGG: 00780+6.3.4.15|Reactome: R-HSA-196780|Reactome: R-HSA-3371599 GYO_2471 e34b8461ff14521c4d3d3b92a783429e 325 SUPERFAMILY SSF46785 6 62 9.8E-11 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily GYO_2867 c7fade8e579340cfae636a12c2dd5c81 75 ProSitePatterns PS01148 Uncharacterized protein family UPF0033 signature. 7 31 - T 14-10-2018 IPR001455 TusA-like domain GYO_2867 c7fade8e579340cfae636a12c2dd5c81 75 Pfam PF01206 Sulfurtransferase TusA 5 74 1.9E-22 T 14-10-2018 IPR001455 TusA-like domain GYO_2867 c7fade8e579340cfae636a12c2dd5c81 75 Gene3D G3DSA:3.30.110.40 1 75 7.7E-29 T 14-10-2018 IPR036868 TusA-like domain superfamily GYO_2867 c7fade8e579340cfae636a12c2dd5c81 75 SUPERFAMILY SSF64307 2 75 7.19E-25 T 14-10-2018 IPR036868 TusA-like domain superfamily GYO_2371 719b74247e8c0f62bd3f956054315533 203 SUPERFAMILY SSF48317 7 194 1.03E-36 T 14-10-2018 IPR036938 Phosphatidic acid phosphatase type 2/haloperoxidase superfamily GYO_2371 719b74247e8c0f62bd3f956054315533 203 Pfam PF01569 PAP2 superfamily 79 192 1.4E-24 T 14-10-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase GYO_2371 719b74247e8c0f62bd3f956054315533 203 SMART SM00014 77 191 1.1E-22 T 14-10-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase GYO_2371 719b74247e8c0f62bd3f956054315533 203 Gene3D G3DSA:1.20.144.10 2 110 5.4E-11 T 14-10-2018 GYO_2371 719b74247e8c0f62bd3f956054315533 203 Gene3D G3DSA:1.20.144.10 111 203 2.8E-24 T 14-10-2018 GYO_4096 be9818e3aeb7565c49e0b6287898fd0d 379 Gene3D G3DSA:1.20.140.10 235 379 1.9E-57 T 14-10-2018 GYO_4096 be9818e3aeb7565c49e0b6287898fd0d 379 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 229 376 1.1E-51 T 14-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 GYO_4096 be9818e3aeb7565c49e0b6287898fd0d 379 ProSitePatterns PS00072 Acyl-CoA dehydrogenases signature 1. 124 136 - T 14-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 GYO_4096 be9818e3aeb7565c49e0b6287898fd0d 379 Gene3D G3DSA:1.10.540.10 1 120 1.0E-44 T 14-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 GYO_4096 be9818e3aeb7565c49e0b6287898fd0d 379 Gene3D G3DSA:2.40.110.10 121 234 1.0E-45 T 14-10-2018 GYO_4096 be9818e3aeb7565c49e0b6287898fd0d 379 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 6 118 6.5E-40 T 14-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 GYO_4096 be9818e3aeb7565c49e0b6287898fd0d 379 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 122 217 5.9E-26 T 14-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 GYO_4096 be9818e3aeb7565c49e0b6287898fd0d 379 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 336 355 - T 14-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 GYO_4096 be9818e3aeb7565c49e0b6287898fd0d 379 SUPERFAMILY SSF47203 227 377 7.41E-61 T 14-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 GYO_4096 be9818e3aeb7565c49e0b6287898fd0d 379 SUPERFAMILY SSF56645 2 242 6.94E-92 T 14-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 GYO_4096 be9818e3aeb7565c49e0b6287898fd0d 379 PIRSF PIRSF016578 4 378 1.7E-19 T 14-10-2018 GYO_3927 44d254bbc54a23b3555467d5a04f7360 1166 SUPERFAMILY SSF53448 6 215 1.26E-52 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases GYO_3927 44d254bbc54a23b3555467d5a04f7360 1166 Pfam PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase 804 1161 4.9E-121 T 14-10-2018 IPR007554 CDP-glycerol glycerophosphotransferase GO:0016020|GO:0047355 GYO_3927 44d254bbc54a23b3555467d5a04f7360 1166 Gene3D G3DSA:3.40.50.11820 811 1157 8.8E-135 T 14-10-2018 GYO_3927 44d254bbc54a23b3555467d5a04f7360 1166 SUPERFAMILY SSF53756 923 1164 5.76E-20 T 14-10-2018 GYO_3927 44d254bbc54a23b3555467d5a04f7360 1166 Gene3D G3DSA:3.90.550.10 4 204 3.6E-56 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases GYO_3927 44d254bbc54a23b3555467d5a04f7360 1166 Gene3D G3DSA:3.40.50.12580 975 1150 8.8E-135 T 14-10-2018 GYO_3927 44d254bbc54a23b3555467d5a04f7360 1166 Pfam PF00535 Glycosyl transferase family 2 9 137 1.0E-32 T 14-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 GYO_1561 fcd4500740dd86c22417b42ed5afb01a 113 Gene3D G3DSA:1.10.260.40 1 109 1.1E-23 T 14-10-2018 GYO_1561 fcd4500740dd86c22417b42ed5afb01a 113 SUPERFAMILY SSF47413 2 64 3.1E-16 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 GYO_1561 fcd4500740dd86c22417b42ed5afb01a 113 SMART SM00530 5 58 2.2E-16 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 GYO_1561 fcd4500740dd86c22417b42ed5afb01a 113 Pfam PF01381 Helix-turn-helix 10 58 6.5E-16 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 GYO_0719 c6f536f58d799f897a5067b0ef5a18c8 333 TIGRFAM TIGR03558 oxido_grp_1: luciferase family oxidoreductase, group 1 6 325 4.3E-114 T 14-10-2018 IPR019949 Luciferase family oxidoreductase, group 1 GYO_0719 c6f536f58d799f897a5067b0ef5a18c8 333 Gene3D G3DSA:3.20.20.30 1 330 5.9E-82 T 14-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 GYO_0719 c6f536f58d799f897a5067b0ef5a18c8 333 Pfam PF00296 Luciferase-like monooxygenase 12 298 2.2E-29 T 14-10-2018 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 GYO_0719 c6f536f58d799f897a5067b0ef5a18c8 333 SUPERFAMILY SSF51679 5 327 2.71E-69 T 14-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 GYO_1767 2bf219ec2dd7a6004147f6903ddeb8be 77 Pfam PF02597 ThiS family 4 77 3.9E-16 T 14-10-2018 IPR003749 Sulfur carrier ThiS/MoaD-like Reactome: R-HSA-947581 GYO_1767 2bf219ec2dd7a6004147f6903ddeb8be 77 SUPERFAMILY SSF54285 1 77 2.06E-16 T 14-10-2018 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp GYO_1767 2bf219ec2dd7a6004147f6903ddeb8be 77 Gene3D G3DSA:3.10.20.30 1 77 9.4E-22 T 14-10-2018 IPR012675 Beta-grasp domain superfamily GYO_1767 2bf219ec2dd7a6004147f6903ddeb8be 77 TIGRFAM TIGR01682 moaD: molybdopterin converting factor, subunit 1 2 77 1.8E-24 T 14-10-2018 GYO_2097 1986705f36de717015883fa12c14a094 700 SUPERFAMILY SSF48168 8 166 6.93E-50 T 14-10-2018 IPR008926 Ribonucleotide reductase R1 subunit, N-terminal KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 GYO_2097 1986705f36de717015883fa12c14a094 700 TIGRFAM TIGR04170 RNR_1b_NrdE: ribonucleoside-diphosphate reductase, class 1b, alpha subunit 8 700 0.0 T 14-10-2018 IPR026459 Ribonucleotide reductase, class 1b, subunit NrdE KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 GYO_2097 1986705f36de717015883fa12c14a094 700 Pfam PF00317 Ribonucleotide reductase, all-alpha domain 91 163 9.9E-17 T 14-10-2018 IPR013509 Ribonucleotide reductase large subunit, N-terminal GO:0004748|GO:0005524|GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 GYO_2097 1986705f36de717015883fa12c14a094 700 Pfam PF08343 Ribonucleotide reductase N-terminal 9 89 6.2E-29 T 14-10-2018 IPR013554 Ribonucleotide reductase N-terminal KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 GYO_2097 1986705f36de717015883fa12c14a094 700 Gene3D G3DSA:1.10.1650.20 286 338 1.5E-183 T 14-10-2018 GYO_2097 1986705f36de717015883fa12c14a094 700 TIGRFAM TIGR02506 NrdE_NrdA: ribonucleoside-diphosphate reductase, alpha subunit 95 688 7.3E-174 T 14-10-2018 IPR013346 Ribonucleotide reductase, class I , alpha subunit GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 GYO_2097 1986705f36de717015883fa12c14a094 700 PRINTS PR01183 Ribonucleotide reductase large chain signature 569 596 5.9E-28 T 14-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 GYO_2097 1986705f36de717015883fa12c14a094 700 PRINTS PR01183 Ribonucleotide reductase large chain signature 420 443 5.9E-28 T 14-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 GYO_2097 1986705f36de717015883fa12c14a094 700 PRINTS PR01183 Ribonucleotide reductase large chain signature 376 387 5.9E-28 T 14-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 GYO_2097 1986705f36de717015883fa12c14a094 700 PRINTS PR01183 Ribonucleotide reductase large chain signature 243 262 5.9E-28 T 14-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 GYO_2097 1986705f36de717015883fa12c14a094 700 PRINTS PR01183 Ribonucleotide reductase large chain signature 459 481 5.9E-28 T 14-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 GYO_2097 1986705f36de717015883fa12c14a094 700 PRINTS PR01183 Ribonucleotide reductase large chain signature 487 510 5.9E-28 T 14-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 GYO_2097 1986705f36de717015883fa12c14a094 700 ProSitePatterns PS00089 Ribonucleotide reductase large subunit signature. 558 580 - T 14-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 GYO_2097 1986705f36de717015883fa12c14a094 700 Pfam PF02867 Ribonucleotide reductase, barrel domain 168 684 6.2E-136 T 14-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 GYO_2097 1986705f36de717015883fa12c14a094 700 SUPERFAMILY SSF51998 167 689 2.81E-166 T 14-10-2018 GYO_2097 1986705f36de717015883fa12c14a094 700 Gene3D G3DSA:3.20.70.20 152 686 1.5E-183 T 14-10-2018 GYO_0576 a313914ff3946b09dfc34c6a9949239f 268 SMART SM00062 46 265 4.8E-83 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF GYO_0576 a313914ff3946b09dfc34c6a9949239f 268 Gene3D G3DSA:3.40.190.10 129 226 1.3E-67 T 14-10-2018 GYO_0576 a313914ff3946b09dfc34c6a9949239f 268 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 47 263 7.0E-56 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF GYO_0576 a313914ff3946b09dfc34c6a9949239f 268 Gene3D G3DSA:3.40.190.10 45 257 1.3E-67 T 14-10-2018 GYO_0576 a313914ff3946b09dfc34c6a9949239f 268 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 70 83 - T 14-10-2018 IPR018313 Solute-binding protein family 3, conserved site GYO_0576 a313914ff3946b09dfc34c6a9949239f 268 SUPERFAMILY SSF53850 1 265 1.94E-62 T 14-10-2018 GYO_1704 991c086f2ba5fc4a927a61ebf41aab3b 165 PIRSF PIRSF027377 8 147 1.0E-61 T 14-10-2018 IPR016856 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 1 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 GYO_1704 991c086f2ba5fc4a927a61ebf41aab3b 165 Pfam PF14489 QueF-like protein 62 140 8.3E-36 T 14-10-2018 IPR029500 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF GO:0008616|GO:0033739 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 GYO_1704 991c086f2ba5fc4a927a61ebf41aab3b 165 Hamap MF_00818 NADPH-dependent 7-cyano-7-deazaguanine reductase [queF]. 1 165 72.866 T 14-10-2018 IPR016856 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 1 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 GYO_1704 991c086f2ba5fc4a927a61ebf41aab3b 165 Gene3D G3DSA:3.30.1130.10 21 165 1.9E-69 T 14-10-2018 GYO_1704 991c086f2ba5fc4a927a61ebf41aab3b 165 SUPERFAMILY SSF55620 27 135 3.11E-29 T 14-10-2018 GYO_1704 991c086f2ba5fc4a927a61ebf41aab3b 165 TIGRFAM TIGR03139 QueF-II: 7-cyano-7-deazaguanine reductase 28 139 5.4E-55 T 14-10-2018 IPR016856 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 1 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 GYO_1658 394840a1dff91ac44e72f7a701cf68f3 154 PRINTS PR00598 Bacterial regulatory protein MarR family signature 75 90 1.8E-9 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 GYO_1658 394840a1dff91ac44e72f7a701cf68f3 154 PRINTS PR00598 Bacterial regulatory protein MarR family signature 124 144 1.8E-9 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 GYO_1658 394840a1dff91ac44e72f7a701cf68f3 154 PRINTS PR00598 Bacterial regulatory protein MarR family signature 94 110 1.8E-9 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 GYO_1658 394840a1dff91ac44e72f7a701cf68f3 154 SMART SM00347 34 134 1.9E-34 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 GYO_1658 394840a1dff91ac44e72f7a701cf68f3 154 SUPERFAMILY SSF46785 13 144 5.33E-33 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily GYO_1658 394840a1dff91ac44e72f7a701cf68f3 154 ProSitePatterns PS01117 MarR-type HTH domain signature. 73 107 - T 14-10-2018 IPR023187 Transcriptional regulator MarR-type, conserved site GYO_1658 394840a1dff91ac44e72f7a701cf68f3 154 Gene3D G3DSA:1.10.10.10 2 150 1.7E-33 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily GYO_1658 394840a1dff91ac44e72f7a701cf68f3 154 Pfam PF01047 MarR family 42 99 8.6E-19 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 GYO_2483 e945bb5e0ecb69a0ce4513af411ecc64 167 Gene3D G3DSA:2.102.10.10 45 164 2.6E-21 T 14-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 GYO_2483 e945bb5e0ecb69a0ce4513af411ecc64 167 SUPERFAMILY SSF50022 4 158 7.07E-29 T 14-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 GYO_2483 e945bb5e0ecb69a0ce4513af411ecc64 167 Pfam PF08802 Cytochrome B6-F complex Fe-S subunit 6 35 1.2E-6 T 14-10-2018 IPR014909 Cytochrome b6-f complex Fe-S subunit GO:0009496|GO:0042651|GO:0051537|GO:0055114 KEGG: 00195+1.10.9.1|MetaCyc: PWY-101 GYO_2483 e945bb5e0ecb69a0ce4513af411ecc64 167 Pfam PF00355 Rieske [2Fe-2S] domain 80 147 1.9E-11 T 14-10-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 GYO_0913 31680be7ecceacbc3c7b957904014eab 422 Gene3D G3DSA:3.30.1490.20 119 188 1.5E-27 T 14-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 GYO_0913 31680be7ecceacbc3c7b957904014eab 422 Pfam PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain 101 293 4.9E-86 T 14-10-2018 IPR020561 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 GYO_0913 31680be7ecceacbc3c7b957904014eab 422 ProSitePatterns PS00184 Phosphoribosylglycinamide synthetase signature. 287 294 - T 14-10-2018 IPR020559 Phosphoribosylglycinamide synthetase, conserved site GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 GYO_0913 31680be7ecceacbc3c7b957904014eab 422 TIGRFAM TIGR00877 purD: phosphoribosylamine--glycine ligase 2 417 9.2E-180 T 14-10-2018 IPR000115 Phosphoribosylglycinamide synthetase GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 GYO_0913 31680be7ecceacbc3c7b957904014eab 422 SUPERFAMILY SSF56059 102 322 3.01E-63 T 14-10-2018 GYO_0913 31680be7ecceacbc3c7b957904014eab 422 SMART SM01210 325 417 1.8E-46 T 14-10-2018 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 GYO_0913 31680be7ecceacbc3c7b957904014eab 422 Hamap MF_00138 Phosphoribosylamine--glycine ligase [purD]. 1 417 43.392 T 14-10-2018 IPR000115 Phosphoribosylglycinamide synthetase GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 GYO_0913 31680be7ecceacbc3c7b957904014eab 422 SUPERFAMILY SSF51246 324 417 1.1E-28 T 14-10-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 GYO_0913 31680be7ecceacbc3c7b957904014eab 422 Gene3D G3DSA:3.90.600.10 325 422 8.9E-36 T 14-10-2018 IPR037123 Phosphoribosylglycinamide synthetase, C-domain superfamily GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 GYO_0913 31680be7ecceacbc3c7b957904014eab 422 Gene3D G3DSA:3.40.50.20 1 93 6.7E-37 T 14-10-2018 GYO_0913 31680be7ecceacbc3c7b957904014eab 422 SUPERFAMILY SSF52440 2 101 8.92E-34 T 14-10-2018 IPR016185 Pre-ATP-grasp domain superfamily GYO_0913 31680be7ecceacbc3c7b957904014eab 422 Pfam PF02843 Phosphoribosylglycinamide synthetase, C domain 326 415 1.9E-27 T 14-10-2018 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 GYO_0913 31680be7ecceacbc3c7b957904014eab 422 SMART SM01209 101 293 1.9E-130 T 14-10-2018 GYO_0913 31680be7ecceacbc3c7b957904014eab 422 Pfam PF02844 Phosphoribosylglycinamide synthetase, N domain 2 100 8.8E-33 T 14-10-2018 IPR020562 Phosphoribosylglycinamide synthetase, N-terminal GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 GYO_0913 31680be7ecceacbc3c7b957904014eab 422 Gene3D G3DSA:3.30.470.20 189 324 3.1E-61 T 14-10-2018 GYO_0718 60b4f488a6528de8ba3fe085642fc279 337 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 32 92 5.1E-10 T 14-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 GYO_0718 60b4f488a6528de8ba3fe085642fc279 337 Gene3D G3DSA:3.40.50.720 129 305 3.4E-80 T 14-10-2018 GYO_0718 60b4f488a6528de8ba3fe085642fc279 337 SUPERFAMILY SSF50129 4 152 7.46E-35 T 14-10-2018 IPR011032 GroES-like superfamily GYO_0718 60b4f488a6528de8ba3fe085642fc279 337 SUPERFAMILY SSF51735 121 259 6.86E-30 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily GYO_0718 60b4f488a6528de8ba3fe085642fc279 337 SMART SM00829 19 335 5.5E-14 T 14-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 GYO_0718 60b4f488a6528de8ba3fe085642fc279 337 Gene3D G3DSA:3.90.180.10 20 335 3.4E-80 T 14-10-2018 GYO_0718 60b4f488a6528de8ba3fe085642fc279 337 Pfam PF13602 Zinc-binding dehydrogenase 191 335 4.0E-20 T 14-10-2018 GYO_2447 eafc6960d5631bbc4a34dc8975eeb37e 416 Gene3D G3DSA:1.25.40.10 271 416 1.0E-5 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 GYO_2447 eafc6960d5631bbc4a34dc8975eeb37e 416 SUPERFAMILY SSF53098 104 279 1.4E-29 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily GYO_2447 eafc6960d5631bbc4a34dc8975eeb37e 416 Pfam PF13482 RNase_H superfamily 105 273 7.1E-38 T 14-10-2018 IPR038720 YprB, ribonuclease H-like domain GYO_2447 eafc6960d5631bbc4a34dc8975eeb37e 416 SUPERFAMILY SSF48452 294 388 7.25E-5 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 GYO_2141 00545da9f4d8892587a39835fc450742 404 Gene3D G3DSA:3.30.300.210 250 402 1.1E-42 T 14-10-2018 IPR038501 Spore germination GerAC superfamily GYO_2141 00545da9f4d8892587a39835fc450742 404 TIGRFAM TIGR02887 spore_ger_x_C: germination protein, Ger(x)C family 12 401 2.3E-100 T 14-10-2018 IPR008844 Spore germination GerAC GO:0009847|GO:0016020 GYO_2141 00545da9f4d8892587a39835fc450742 404 Pfam PF05504 Spore germination B3/ GerAC like, C-terminal 232 399 9.1E-36 T 14-10-2018 IPR008844 Spore germination GerAC GO:0009847|GO:0016020 GYO_0130 4c445e248613482c98d01126dde5bebe 232 Pfam PF00687 Ribosomal protein L1p/L10e family 31 220 8.7E-56 T 14-10-2018 IPR028364 Ribosomal protein L1/ribosomal biogenesis protein GYO_0130 4c445e248613482c98d01126dde5bebe 232 SUPERFAMILY SSF56808 6 225 4.97E-86 T 14-10-2018 IPR023674 Ribosomal protein L1-like GYO_0130 4c445e248613482c98d01126dde5bebe 232 TIGRFAM TIGR01169 rplA_bact: ribosomal protein uL1 3 228 9.7E-110 T 14-10-2018 IPR005878 Ribosomal protein L1, bacterial-type GO:0003723|GO:0003735|GO:0006412|GO:0015934 GYO_0130 4c445e248613482c98d01126dde5bebe 232 Gene3D G3DSA:3.30.190.20 21 225 1.7E-86 T 14-10-2018 GYO_0130 4c445e248613482c98d01126dde5bebe 232 PIRSF PIRSF002155 1 227 3.4E-82 T 14-10-2018 IPR002143 Ribosomal protein L1 GO:0003723|GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 GYO_0130 4c445e248613482c98d01126dde5bebe 232 Gene3D G3DSA:3.40.50.790 68 159 1.7E-86 T 14-10-2018 IPR016095 Ribosomal protein L1, 3-layer alpha/beta-sandwich GYO_0130 4c445e248613482c98d01126dde5bebe 232 Hamap MF_01318_B 50S ribosomal protein L1 [rplA]. 2 229 45.092 T 14-10-2018 IPR005878 Ribosomal protein L1, bacterial-type GO:0003723|GO:0003735|GO:0006412|GO:0015934 GYO_0130 4c445e248613482c98d01126dde5bebe 232 ProSitePatterns PS01199 Ribosomal protein L1 signature. 121 139 - T 14-10-2018 IPR023673 Ribosomal protein L1, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 GYO_3064 d67c276dfe136cfd4dcfd0c7df6c9a4a 774 Gene3D G3DSA:1.10.8.60 490 582 2.4E-33 T 14-10-2018 GYO_3064 d67c276dfe136cfd4dcfd0c7df6c9a4a 774 SMART SM00464 8 200 5.2E-80 T 14-10-2018 IPR003111 Lon, substrate-binding domain GYO_3064 d67c276dfe136cfd4dcfd0c7df6c9a4a 774 PIRSF PIRSF001174 1 773 0.0 T 14-10-2018 IPR004815 Lon protease, bacterial/eukaryotic-type GO:0004176|GO:0005524|GO:0006508 GYO_3064 d67c276dfe136cfd4dcfd0c7df6c9a4a 774 Gene3D G3DSA:1.20.58.1480 119 243 1.6E-44 T 14-10-2018 GYO_3064 d67c276dfe136cfd4dcfd0c7df6c9a4a 774 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 350 487 2.0E-24 T 14-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 GYO_3064 d67c276dfe136cfd4dcfd0c7df6c9a4a 774 Gene3D G3DSA:3.30.230.10 591 774 4.1E-87 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup GYO_3064 d67c276dfe136cfd4dcfd0c7df6c9a4a 774 ProSitePatterns PS01046 ATP-dependent serine proteases, lon family, serine active site. 674 682 - T 14-10-2018 IPR008268 Peptidase S16, active site GO:0004176|GO:0004252|GO:0006508 GYO_3064 d67c276dfe136cfd4dcfd0c7df6c9a4a 774 Hamap MF_01973 Lon protease [lon]. 9 770 73.662 T 14-10-2018 IPR027543 Lon protease, bacterial GO:0004176|GO:0004252|GO:0005524|GO:0006508|GO:0043565 GYO_3064 d67c276dfe136cfd4dcfd0c7df6c9a4a 774 SUPERFAMILY SSF54211 593 768 9.48E-56 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold GYO_3064 d67c276dfe136cfd4dcfd0c7df6c9a4a 774 SUPERFAMILY SSF88697 9 199 1.52E-44 T 14-10-2018 IPR015947 PUA-like superfamily GYO_3064 d67c276dfe136cfd4dcfd0c7df6c9a4a 774 Pfam PF05362 Lon protease (S16) C-terminal proteolytic domain 568 770 1.0E-98 T 14-10-2018 IPR008269 Peptidase S16, Lon proteolytic domain GO:0004176|GO:0004252|GO:0006508 GYO_3064 d67c276dfe136cfd4dcfd0c7df6c9a4a 774 Gene3D G3DSA:3.40.50.300 311 489 1.1E-69 T 14-10-2018 GYO_3064 d67c276dfe136cfd4dcfd0c7df6c9a4a 774 Pfam PF02190 ATP-dependent protease La (LON) substrate-binding domain 9 199 2.6E-41 T 14-10-2018 IPR003111 Lon, substrate-binding domain GYO_3064 d67c276dfe136cfd4dcfd0c7df6c9a4a 774 SUPERFAMILY SSF52540 309 586 3.92E-53 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase GYO_3064 d67c276dfe136cfd4dcfd0c7df6c9a4a 774 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 724 742 2.4E-54 T 14-10-2018 GYO_3064 d67c276dfe136cfd4dcfd0c7df6c9a4a 774 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 701 720 2.4E-54 T 14-10-2018 GYO_3064 d67c276dfe136cfd4dcfd0c7df6c9a4a 774 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 671 690 2.4E-54 T 14-10-2018 GYO_3064 d67c276dfe136cfd4dcfd0c7df6c9a4a 774 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 593 609 2.4E-54 T 14-10-2018 GYO_3064 d67c276dfe136cfd4dcfd0c7df6c9a4a 774 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 354 373 2.4E-54 T 14-10-2018 GYO_3064 d67c276dfe136cfd4dcfd0c7df6c9a4a 774 TIGRFAM TIGR00763 lon: endopeptidase La 10 769 0.0 T 14-10-2018 IPR004815 Lon protease, bacterial/eukaryotic-type GO:0004176|GO:0005524|GO:0006508 GYO_3064 d67c276dfe136cfd4dcfd0c7df6c9a4a 774 SMART SM00382 346 491 5.3E-14 T 14-10-2018 IPR003593 AAA+ ATPase domain GYO_3064 d67c276dfe136cfd4dcfd0c7df6c9a4a 774 Gene3D G3DSA:2.30.130.40 1 115 2.6E-32 T 14-10-2018 GYO_0627 7cd2dd40e6f6696ba93200da06c8e736 337 Pfam PF02626 Carboxyltransferase domain, subdomain A and B 25 307 6.5E-91 T 14-10-2018 IPR003778 Carboxyltransferase domain, subdomain A and B GYO_0627 7cd2dd40e6f6696ba93200da06c8e736 337 TIGRFAM TIGR00724 urea_amlyse_rel: biotin-dependent carboxylase uncharacterized domain 3 332 7.2E-93 T 14-10-2018 IPR003778 Carboxyltransferase domain, subdomain A and B GYO_0627 7cd2dd40e6f6696ba93200da06c8e736 337 Gene3D G3DSA:2.40.100.10 196 335 6.0E-50 T 14-10-2018 IPR029000 Cyclophilin-like domain superfamily GYO_0627 7cd2dd40e6f6696ba93200da06c8e736 337 SMART SM00797 24 323 2.7E-142 T 14-10-2018 IPR003778 Carboxyltransferase domain, subdomain A and B GYO_0627 7cd2dd40e6f6696ba93200da06c8e736 337 SUPERFAMILY SSF50891 198 313 2.28E-9 T 14-10-2018 IPR029000 Cyclophilin-like domain superfamily GYO_3109 5086cd0ecc2efc3af5103ff4dc6af32c 313 Gene3D G3DSA:3.30.420.10 94 312 1.9E-78 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 GYO_3109 5086cd0ecc2efc3af5103ff4dc6af32c 313 PIRSF PIRSF037748 1 309 1.2E-120 T 14-10-2018 IPR004641 Ribonuclease HIII GO:0004523|GO:0005737|GO:0016070 GYO_3109 5086cd0ecc2efc3af5103ff4dc6af32c 313 SUPERFAMILY SSF53098 95 306 6.07E-50 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily GYO_3109 5086cd0ecc2efc3af5103ff4dc6af32c 313 Hamap MF_00053 Ribonuclease HIII [rnhC]. 1 308 34.552 T 14-10-2018 IPR004641 Ribonuclease HIII GO:0004523|GO:0005737|GO:0016070 GYO_3109 5086cd0ecc2efc3af5103ff4dc6af32c 313 TIGRFAM TIGR00716 rnhC: ribonuclease HIII 5 300 1.3E-139 T 14-10-2018 IPR004641 Ribonuclease HIII GO:0004523|GO:0005737|GO:0016070 GYO_3109 5086cd0ecc2efc3af5103ff4dc6af32c 313 Pfam PF01351 Ribonuclease HII 97 301 1.0E-58 T 14-10-2018 IPR024567 Ribonuclease HII/HIII domain GYO_3109 5086cd0ecc2efc3af5103ff4dc6af32c 313 Pfam PF11858 Domain of unknown function (DUF3378) 3 77 1.6E-27 T 14-10-2018 IPR024568 Ribonuclease HIII, N-terminal GYO_3109 5086cd0ecc2efc3af5103ff4dc6af32c 313 Gene3D G3DSA:3.30.310.10 1 84 1.2E-27 T 14-10-2018 IPR012295 TBP domain superfamily GYO_0197 31ddb3da4bdd8140fe8fe3cbcc5d9b46 657 SUPERFAMILY SSF52540 6 227 2.77E-7 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase GYO_0197 31ddb3da4bdd8140fe8fe3cbcc5d9b46 657 Pfam PF13476 AAA domain 9 317 8.0E-7 T 14-10-2018 IPR038729 Rad50/SbcC-type AAA domain GYO_0197 31ddb3da4bdd8140fe8fe3cbcc5d9b46 657 SUPERFAMILY SSF52540 7 55 2.02E-6 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase GYO_0197 31ddb3da4bdd8140fe8fe3cbcc5d9b46 657 Gene3D G3DSA:3.40.50.300 5 304 5.2E-17 T 14-10-2018 GYO_0276 31ddb3da4bdd8140fe8fe3cbcc5d9b46 657 SUPERFAMILY SSF52540 6 227 2.77E-7 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase GYO_0276 31ddb3da4bdd8140fe8fe3cbcc5d9b46 657 Pfam PF13476 AAA domain 9 317 8.0E-7 T 14-10-2018 IPR038729 Rad50/SbcC-type AAA domain GYO_0276 31ddb3da4bdd8140fe8fe3cbcc5d9b46 657 SUPERFAMILY SSF52540 7 55 2.02E-6 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase GYO_0276 31ddb3da4bdd8140fe8fe3cbcc5d9b46 657 Gene3D G3DSA:3.40.50.300 5 304 5.2E-17 T 14-10-2018 GYO_3425 2865e03eba9f393dc50b853877b9f0b4 387 Gene3D G3DSA:1.20.1090.10 185 386 2.4E-47 T 14-10-2018 GYO_3425 2865e03eba9f393dc50b853877b9f0b4 387 SUPERFAMILY SSF56796 1 385 6.93E-120 T 14-10-2018 GYO_3425 2865e03eba9f393dc50b853877b9f0b4 387 Gene3D G3DSA:3.40.50.1970 1 184 2.5E-59 T 14-10-2018 GYO_3425 2865e03eba9f393dc50b853877b9f0b4 387 Pfam PF00465 Iron-containing alcohol dehydrogenase 9 369 2.7E-104 T 14-10-2018 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA GO:0016491|GO:0046872|GO:0055114 Reactome: R-HSA-880009 GYO_3425 2865e03eba9f393dc50b853877b9f0b4 387 ProSitePatterns PS00060 Iron-containing alcohol dehydrogenases signature 2. 264 284 - T 14-10-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 GYO_3425 2865e03eba9f393dc50b853877b9f0b4 387 ProSitePatterns PS00913 Iron-containing alcohol dehydrogenases signature 1. 173 201 - T 14-10-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 GYO_0168 cc83c372dc00bd466436fd85475f3951 314 Gene3D G3DSA:1.10.150.20 237 314 1.5E-34 T 14-10-2018 GYO_0168 cc83c372dc00bd466436fd85475f3951 314 Pfam PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain 26 221 3.4E-23 T 14-10-2018 IPR011263 DNA-directed RNA polymerase, RpoA/D/Rpb3-type GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 GYO_0168 cc83c372dc00bd466436fd85475f3951 314 Gene3D G3DSA:2.170.120.12 50 170 9.0E-88 T 14-10-2018 IPR036643 DNA-directed RNA polymerase, insert domain superfamily KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 GYO_0168 cc83c372dc00bd466436fd85475f3951 314 Pfam PF03118 Bacterial RNA polymerase, alpha chain C terminal domain 240 305 1.9E-29 T 14-10-2018 IPR011260 RNA polymerase, alpha subunit, C-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 GYO_0168 cc83c372dc00bd466436fd85475f3951 314 SUPERFAMILY SSF56553 50 171 1.26E-43 T 14-10-2018 IPR036643 DNA-directed RNA polymerase, insert domain superfamily KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 GYO_0168 cc83c372dc00bd466436fd85475f3951 314 TIGRFAM TIGR02027 rpoA: DNA-directed RNA polymerase, alpha subunit 21 313 1.7E-125 T 14-10-2018 IPR011773 DNA-directed RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 GYO_0168 cc83c372dc00bd466436fd85475f3951 314 ProDom PD001179 RNA POLYMERASE ALPHA DNA-DIRECTED SUBUNIT CHAIN NUCLEOTIDYLTRANSFERASE TRANSFERASE TRANSCRIPTION TRANSCRIPTASE 253 310 1.0E-25 T 14-10-2018 IPR011260 RNA polymerase, alpha subunit, C-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 GYO_0168 cc83c372dc00bd466436fd85475f3951 314 SUPERFAMILY SSF55257 5 230 2.16E-31 T 14-10-2018 IPR036603 RNA polymerase, RBP11-like subunit GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 GYO_0168 cc83c372dc00bd466436fd85475f3951 314 SUPERFAMILY SSF47789 247 313 7.85E-25 T 14-10-2018 GYO_0168 cc83c372dc00bd466436fd85475f3951 314 Gene3D G3DSA:3.30.1360.10 17 221 9.0E-88 T 14-10-2018 IPR036603 RNA polymerase, RBP11-like subunit GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 GYO_0168 cc83c372dc00bd466436fd85475f3951 314 Pfam PF01000 RNA polymerase Rpb3/RpoA insert domain 59 152 4.8E-24 T 14-10-2018 IPR011262 DNA-directed RNA polymerase, insert domain GO:0003899|GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 GYO_0168 cc83c372dc00bd466436fd85475f3951 314 SMART SM00662 20 227 4.9E-103 T 14-10-2018 IPR011263 DNA-directed RNA polymerase, RpoA/D/Rpb3-type GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 GYO_0168 cc83c372dc00bd466436fd85475f3951 314 Hamap MF_00059 DNA-directed RNA polymerase subunit alpha [rpoA]. 1 313 37.07 T 14-10-2018 IPR011773 DNA-directed RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 GYO_1242 fed345e8e181627cfb35b395c5e0809b 331 SUPERFAMILY SSF51430 1 319 1.1E-103 T 14-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily GYO_1242 fed345e8e181627cfb35b395c5e0809b 331 Pfam PF00248 Aldo/keto reductase family 15 310 1.5E-80 T 14-10-2018 IPR023210 NADP-dependent oxidoreductase domain GYO_1242 fed345e8e181627cfb35b395c5e0809b 331 Gene3D G3DSA:3.20.20.100 1 331 7.5E-143 T 14-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily GYO_1242 fed345e8e181627cfb35b395c5e0809b 331 ProSitePatterns PS00062 Aldo/keto reductase family signature 2. 140 157 - T 14-10-2018 IPR018170 Aldo/keto reductase, conserved site GO:0016491|GO:0055114 GYO_1242 fed345e8e181627cfb35b395c5e0809b 331 PRINTS PR00069 Aldo-keto reductase signature 109 127 2.1E-14 T 14-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 GYO_1242 fed345e8e181627cfb35b395c5e0809b 331 PRINTS PR00069 Aldo-keto reductase signature 43 67 2.1E-14 T 14-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 GYO_1242 fed345e8e181627cfb35b395c5e0809b 331 PRINTS PR00069 Aldo-keto reductase signature 140 157 2.1E-14 T 14-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 GYO_0643 4bbe14b69baec57efcf3ac4400162e00 144 Gene3D G3DSA:1.10.10.10 1 50 1.5E-23 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily GYO_0643 4bbe14b69baec57efcf3ac4400162e00 144 Gene3D G3DSA:3.30.70.920 51 144 5.9E-28 T 14-10-2018 GYO_0643 4bbe14b69baec57efcf3ac4400162e00 144 Pfam PF01037 Lrp/AsnC ligand binding domain 71 135 1.3E-14 T 14-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain GYO_0643 4bbe14b69baec57efcf3ac4400162e00 144 SUPERFAMILY SSF54909 64 137 4.65E-17 T 14-10-2018 IPR011008 Dimeric alpha-beta barrel GYO_0643 4bbe14b69baec57efcf3ac4400162e00 144 Pfam PF13412 Winged helix-turn-helix DNA-binding 3 50 5.1E-14 T 14-10-2018 GYO_0643 4bbe14b69baec57efcf3ac4400162e00 144 SUPERFAMILY SSF46785 2 62 2.56E-16 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily GYO_0643 4bbe14b69baec57efcf3ac4400162e00 144 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 19 30 7.9E-15 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 GYO_0643 4bbe14b69baec57efcf3ac4400162e00 144 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 3 19 7.9E-15 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 GYO_0643 4bbe14b69baec57efcf3ac4400162e00 144 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 30 49 7.9E-15 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 GYO_0643 4bbe14b69baec57efcf3ac4400162e00 144 SMART SM00344 3 109 4.4E-47 T 14-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 GYO_1978 b005f96ce752b979a0191488475db975 427 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 134 343 1.5E-76 T 14-10-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 GYO_1978 b005f96ce752b979a0191488475db975 427 SMART SM00382 146 327 3.3E-9 T 14-10-2018 IPR003593 AAA+ ATPase domain GYO_1978 b005f96ce752b979a0191488475db975 427 SUPERFAMILY SSF52540 81 348 3.74E-96 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase GYO_1978 b005f96ce752b979a0191488475db975 427 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 11 77 1.8E-7 T 14-10-2018 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 GYO_1978 b005f96ce752b979a0191488475db975 427 TIGRFAM TIGR03497 FliI_clade2: flagellar protein export ATPase FliI 9 422 8.1E-208 T 14-10-2018 IPR022425 Flagellar export ATPase FliI, clade 2 GO:0016887|GO:0044780|GO:0071973 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 GYO_1978 b005f96ce752b979a0191488475db975 427 TIGRFAM TIGR01026 fliI_yscN: ATPase, FliI/YscN family 4 423 7.6E-208 T 14-10-2018 IPR005714 ATPase, type III secretion system, FliI/YscN GO:0005737|GO:0009058|GO:0016887|GO:0030254|GO:0030257 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 GYO_1978 b005f96ce752b979a0191488475db975 427 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 334 343 - T 14-10-2018 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 GYO_1978 b005f96ce752b979a0191488475db975 427 Gene3D G3DSA:3.40.50.12240 1 425 1.5E-152 T 14-10-2018 GYO_0657 ed4850abd6ad65c92d43b337135a8ca1 150 Pfam PF09954 Uncharacterized protein conserved in bacteria (DUF2188) 90 145 1.9E-15 T 14-10-2018 IPR018691 Protein of unknown function DUF2188 GYO_0314 fb79256acc3ebfeb6fd332969b64e9e5 466 Gene3D G3DSA:3.30.1490.360 28 93 6.3E-25 T 14-10-2018 GYO_0314 fb79256acc3ebfeb6fd332969b64e9e5 466 Gene3D G3DSA:3.30.360.90 396 466 4.2E-19 T 14-10-2018 GYO_0314 fb79256acc3ebfeb6fd332969b64e9e5 466 Gene3D G3DSA:3.40.50.11790 208 379 6.1E-64 T 14-10-2018 GYO_0314 fb79256acc3ebfeb6fd332969b64e9e5 466 Gene3D G3DSA:3.30.160.610 97 177 7.8E-26 T 14-10-2018 GYO_0314 fb79256acc3ebfeb6fd332969b64e9e5 466 Pfam PF17481 Phage tail sheath protein beta-sandwich domain 102 199 4.8E-10 T 14-10-2018 IPR035326 Phage tail sheath protein, beta-sandwich domain GYO_0314 fb79256acc3ebfeb6fd332969b64e9e5 466 ProDom PD032508 PHAGE-LIKE PBSX XKDK ELEMENT PHAGE LIN1278 SHEATH YQBL RELATED TAIL 333 466 3.0E-68 T 14-10-2018 IPR020287 Tail sheath protein, C-terminal domain GYO_0314 fb79256acc3ebfeb6fd332969b64e9e5 466 Pfam PF04984 Phage tail sheath protein subtilisin-like domain 203 351 2.3E-37 T 14-10-2018 IPR035089 Tail sheath protein, subtilisin-like domain GYO_0314 fb79256acc3ebfeb6fd332969b64e9e5 466 Gene3D G3DSA:1.10.10.2290 269 349 6.1E-64 T 14-10-2018 GYO_0314 fb79256acc3ebfeb6fd332969b64e9e5 466 Pfam PF17482 Phage tail sheath C-terminal domain 358 466 6.5E-24 T 14-10-2018 IPR020287 Tail sheath protein, C-terminal domain GYO_0235 fb79256acc3ebfeb6fd332969b64e9e5 466 Gene3D G3DSA:3.30.1490.360 28 93 6.3E-25 T 14-10-2018 GYO_0235 fb79256acc3ebfeb6fd332969b64e9e5 466 Gene3D G3DSA:3.30.360.90 396 466 4.2E-19 T 14-10-2018 GYO_0235 fb79256acc3ebfeb6fd332969b64e9e5 466 Gene3D G3DSA:3.40.50.11790 208 379 6.1E-64 T 14-10-2018 GYO_0235 fb79256acc3ebfeb6fd332969b64e9e5 466 Gene3D G3DSA:3.30.160.610 97 177 7.8E-26 T 14-10-2018 GYO_0235 fb79256acc3ebfeb6fd332969b64e9e5 466 Pfam PF17481 Phage tail sheath protein beta-sandwich domain 102 199 4.8E-10 T 14-10-2018 IPR035326 Phage tail sheath protein, beta-sandwich domain GYO_0235 fb79256acc3ebfeb6fd332969b64e9e5 466 ProDom PD032508 PHAGE-LIKE PBSX XKDK ELEMENT PHAGE LIN1278 SHEATH YQBL RELATED TAIL 333 466 3.0E-68 T 14-10-2018 IPR020287 Tail sheath protein, C-terminal domain GYO_0235 fb79256acc3ebfeb6fd332969b64e9e5 466 Pfam PF04984 Phage tail sheath protein subtilisin-like domain 203 351 2.3E-37 T 14-10-2018 IPR035089 Tail sheath protein, subtilisin-like domain GYO_0235 fb79256acc3ebfeb6fd332969b64e9e5 466 Gene3D G3DSA:1.10.10.2290 269 349 6.1E-64 T 14-10-2018 GYO_0235 fb79256acc3ebfeb6fd332969b64e9e5 466 Pfam PF17482 Phage tail sheath C-terminal domain 358 466 6.5E-24 T 14-10-2018 IPR020287 Tail sheath protein, C-terminal domain GYO_1986 41d02f08d6a090abcbe8608a1700eabb 332 Gene3D G3DSA:2.30.330.10 241 326 1.6E-10 T 14-10-2018 IPR036429 SpoA-like superfamily GYO_1986 41d02f08d6a090abcbe8608a1700eabb 332 TIGRFAM TIGR01397 fliM_switch: flagellar motor switch protein FliM 4 322 3.1E-115 T 14-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 GYO_1986 41d02f08d6a090abcbe8608a1700eabb 332 PRINTS PR00955 Flagellar motor switch protein FliM signature 3 16 1.6E-29 T 14-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 GYO_1986 41d02f08d6a090abcbe8608a1700eabb 332 PRINTS PR00955 Flagellar motor switch protein FliM signature 91 107 1.6E-29 T 14-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 GYO_1986 41d02f08d6a090abcbe8608a1700eabb 332 PRINTS PR00955 Flagellar motor switch protein FliM signature 116 135 1.6E-29 T 14-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 GYO_1986 41d02f08d6a090abcbe8608a1700eabb 332 PRINTS PR00955 Flagellar motor switch protein FliM signature 212 230 1.6E-29 T 14-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 GYO_1986 41d02f08d6a090abcbe8608a1700eabb 332 Gene3D G3DSA:3.40.1550.10 46 231 1.9E-60 T 14-10-2018 IPR028976 CheC-like superfamily GYO_1986 41d02f08d6a090abcbe8608a1700eabb 332 Pfam PF02154 Flagellar motor switch protein FliM 40 230 4.0E-83 T 14-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 GYO_1986 41d02f08d6a090abcbe8608a1700eabb 332 Pfam PF01052 Type III flagellar switch regulator (C-ring) FliN C-term 254 322 4.3E-22 T 14-10-2018 IPR001543 Surface presentation of antigen (SpoA) GYO_1986 41d02f08d6a090abcbe8608a1700eabb 332 PIRSF PIRSF002888 2 332 1.9E-124 T 14-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 GYO_1986 41d02f08d6a090abcbe8608a1700eabb 332 SUPERFAMILY SSF103039 47 232 1.83E-34 T 14-10-2018 IPR028976 CheC-like superfamily GYO_1986 41d02f08d6a090abcbe8608a1700eabb 332 SUPERFAMILY SSF101801 251 323 8.5E-18 T 14-10-2018 IPR036429 SpoA-like superfamily GYO_0469 aa4d41ac24c22d8035a9bb5db067e3b5 188 SUPERFAMILY SSF46689 5 73 6.67E-17 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 GYO_0469 aa4d41ac24c22d8035a9bb5db067e3b5 188 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 10 23 4.1E-7 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 GYO_0469 aa4d41ac24c22d8035a9bb5db067e3b5 188 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 31 54 4.1E-7 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 GYO_0469 aa4d41ac24c22d8035a9bb5db067e3b5 188 Pfam PF00440 Bacterial regulatory proteins, tetR family 10 57 5.7E-16 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 GYO_0469 aa4d41ac24c22d8035a9bb5db067e3b5 188 Gene3D G3DSA:1.10.357.10 2 188 3.7E-59 T 14-10-2018 GYO_0469 aa4d41ac24c22d8035a9bb5db067e3b5 188 SUPERFAMILY SSF48498 78 187 3.39E-23 T 14-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily GYO_4078 494700e7e9eb4dc1572d3456bcb9d0f4 128 SUPERFAMILY SSF54593 3 127 4.83E-32 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase GYO_4078 494700e7e9eb4dc1572d3456bcb9d0f4 128 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 6 124 5.2E-19 T 14-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain GYO_4078 494700e7e9eb4dc1572d3456bcb9d0f4 128 Gene3D G3DSA:3.10.180.10 8 127 5.6E-33 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase GYO_1216 3454925be08e86995fd982f434b0d270 274 Gene3D G3DSA:1.20.1080.10 1 244 3.1E-77 T 14-10-2018 IPR023271 Aquaporin-like Reactome: R-HSA-432047 GYO_1216 3454925be08e86995fd982f434b0d270 274 PRINTS PR00783 Major intrinsic protein family signature 81 100 8.0E-50 T 14-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 GYO_1216 3454925be08e86995fd982f434b0d270 274 PRINTS PR00783 Major intrinsic protein family signature 136 154 8.0E-50 T 14-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 GYO_1216 3454925be08e86995fd982f434b0d270 274 PRINTS PR00783 Major intrinsic protein family signature 213 233 8.0E-50 T 14-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 GYO_1216 3454925be08e86995fd982f434b0d270 274 PRINTS PR00783 Major intrinsic protein family signature 2 21 8.0E-50 T 14-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 GYO_1216 3454925be08e86995fd982f434b0d270 274 PRINTS PR00783 Major intrinsic protein family signature 166 188 8.0E-50 T 14-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 GYO_1216 3454925be08e86995fd982f434b0d270 274 PRINTS PR00783 Major intrinsic protein family signature 44 68 8.0E-50 T 14-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 GYO_1216 3454925be08e86995fd982f434b0d270 274 Pfam PF00230 Major intrinsic protein 3 230 5.2E-50 T 14-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 GYO_1216 3454925be08e86995fd982f434b0d270 274 ProSitePatterns PS00221 MIP family signature. 62 70 - T 14-10-2018 IPR022357 Major intrinsic protein, conserved site Reactome: R-HSA-432047 GYO_1216 3454925be08e86995fd982f434b0d270 274 TIGRFAM TIGR00861 MIP: MIP family channel proteins 6 230 1.3E-69 T 14-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 GYO_1216 3454925be08e86995fd982f434b0d270 274 SUPERFAMILY SSF81338 2 234 2.62E-72 T 14-10-2018 IPR023271 Aquaporin-like Reactome: R-HSA-432047 GYO_2971 e80c4927f088911f12f97ce42680acd1 584 SUPERFAMILY SSF56601 188 578 1.18E-60 T 14-10-2018 IPR012338 Beta-lactamase/transpeptidase-like GYO_2971 e80c4927f088911f12f97ce42680acd1 584 SUPERFAMILY SSF56519 50 223 1.57E-21 T 14-10-2018 IPR036138 Penicillin-binding protein, dimerisation domain superfamily GO:0008658 GYO_2971 e80c4927f088911f12f97ce42680acd1 584 Gene3D G3DSA:3.90.1310.30 50 232 2.5E-16 T 14-10-2018 GYO_2971 e80c4927f088911f12f97ce42680acd1 584 Pfam PF03717 Penicillin-binding Protein dimerisation domain 61 219 6.5E-10 T 14-10-2018 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 GYO_2971 e80c4927f088911f12f97ce42680acd1 584 Pfam PF00905 Penicillin binding protein transpeptidase domain 263 573 1.0E-61 T 14-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 GYO_2971 e80c4927f088911f12f97ce42680acd1 584 Gene3D G3DSA:3.40.710.10 237 584 3.8E-70 T 14-10-2018 GYO_2685 2f67c399ec6161222e64e43266d9e9b0 281 Pfam PF01479 S4 domain 6 48 2.7E-9 T 14-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 GYO_2685 2f67c399ec6161222e64e43266d9e9b0 281 Gene3D G3DSA:3.40.50.150 65 280 6.1E-84 T 14-10-2018 GYO_2685 2f67c399ec6161222e64e43266d9e9b0 281 TIGRFAM TIGR00478 tly: TlyA family rRNA methyltransferase/putative hemolysin 7 239 6.1E-104 T 14-10-2018 IPR004538 Haemolysin A /rRNA methyltransferase TlyA GO:0003723 GYO_2685 2f67c399ec6161222e64e43266d9e9b0 281 SUPERFAMILY SSF53335 58 244 9.14E-20 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase GYO_2685 2f67c399ec6161222e64e43266d9e9b0 281 Pfam PF01728 FtsJ-like methyltransferase 62 210 6.7E-16 T 14-10-2018 IPR002877 Ribosomal RNA methyltransferase FtsJ domain GO:0008168|GO:0032259 GYO_2685 2f67c399ec6161222e64e43266d9e9b0 281 SUPERFAMILY SSF55174 5 71 2.94E-12 T 14-10-2018 GYO_2685 2f67c399ec6161222e64e43266d9e9b0 281 PIRSF PIRSF005578 1 269 3.6E-108 T 14-10-2018 IPR004538 Haemolysin A /rRNA methyltransferase TlyA GO:0003723 GYO_2685 2f67c399ec6161222e64e43266d9e9b0 281 Gene3D G3DSA:3.10.290.10 2 64 2.0E-24 T 14-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 GYO_2685 2f67c399ec6161222e64e43266d9e9b0 281 SMART SM00363 6 71 4.5E-9 T 14-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 GYO_1431 ebe5ec0eea013576a72843c281df6b59 61 Pfam PF11151 Protein of unknown function (DUF2929) 2 56 9.1E-18 T 14-10-2018 IPR021324 Protein of unknown function DUF2929 GYO_3441 b31efb70c0c8979795d22aebc4decf90 533 Gene3D G3DSA:1.10.287.130 314 378 2.8E-7 T 14-10-2018 GYO_3441 b31efb70c0c8979795d22aebc4decf90 533 PRINTS PR00344 Bacterial sensor protein C-terminal signature 476 486 1.8E-10 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 GYO_3441 b31efb70c0c8979795d22aebc4decf90 533 PRINTS PR00344 Bacterial sensor protein C-terminal signature 511 524 1.8E-10 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 GYO_3441 b31efb70c0c8979795d22aebc4decf90 533 PRINTS PR00344 Bacterial sensor protein C-terminal signature 458 472 1.8E-10 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 GYO_3441 b31efb70c0c8979795d22aebc4decf90 533 PRINTS PR00344 Bacterial sensor protein C-terminal signature 487 505 1.8E-10 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 GYO_3441 b31efb70c0c8979795d22aebc4decf90 533 Pfam PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain 322 379 1.3E-13 T 14-10-2018 IPR039506 SpoOB, alpha-helical domain GYO_3441 b31efb70c0c8979795d22aebc4decf90 533 SUPERFAMILY SSF103190 37 169 4.71E-40 T 14-10-2018 IPR029151 Periplasmic sensor-like domain superfamily GYO_3441 b31efb70c0c8979795d22aebc4decf90 533 Gene3D G3DSA:3.30.565.10 379 533 2.4E-27 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily GYO_3441 b31efb70c0c8979795d22aebc4decf90 533 SMART SM00091 212 280 0.0015 T 14-10-2018 IPR000014 PAS domain GYO_3441 b31efb70c0c8979795d22aebc4decf90 533 SMART SM00387 419 527 2.6E-19 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase GYO_3441 b31efb70c0c8979795d22aebc4decf90 533 SUPERFAMILY SSF55890 323 414 6.15E-16 T 14-10-2018 IPR016120 Signal transduction histidine kinase, sporulation regulator SpoOB GO:0000155|GO:0000160|GO:0016772 GYO_3441 b31efb70c0c8979795d22aebc4decf90 533 Pfam PF17203 Single cache domain 3 36 170 3.5E-28 T 14-10-2018 IPR033463 Single cache domain 3 GYO_3441 b31efb70c0c8979795d22aebc4decf90 533 Gene3D G3DSA:3.30.450.20 199 313 2.1E-21 T 14-10-2018 GYO_3441 b31efb70c0c8979795d22aebc4decf90 533 Gene3D G3DSA:3.30.450.20 31 170 2.7E-45 T 14-10-2018 GYO_3441 b31efb70c0c8979795d22aebc4decf90 533 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 424 526 8.3E-17 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase GYO_3441 b31efb70c0c8979795d22aebc4decf90 533 SUPERFAMILY SSF55874 394 526 1.7E-27 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily GYO_3441 b31efb70c0c8979795d22aebc4decf90 533 Pfam PF00989 PAS fold 212 312 1.8E-5 T 14-10-2018 IPR013767 PAS fold GO:0006355 GYO_0820 5e6489502127a8f78f7b399920bf1df9 185 SUPERFAMILY SSF47413 3 72 4.02E-18 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 GYO_0820 5e6489502127a8f78f7b399920bf1df9 185 SMART SM00530 11 66 1.4E-14 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 GYO_0820 5e6489502127a8f78f7b399920bf1df9 185 Pfam PF01381 Helix-turn-helix 14 65 8.5E-15 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 GYO_0820 5e6489502127a8f78f7b399920bf1df9 185 Pfam PF07883 Cupin domain 110 175 1.8E-13 T 14-10-2018 IPR013096 Cupin 2, conserved barrel GYO_0820 5e6489502127a8f78f7b399920bf1df9 185 Gene3D G3DSA:2.60.120.10 91 185 1.3E-25 T 14-10-2018 IPR014710 RmlC-like jelly roll fold GYO_0820 5e6489502127a8f78f7b399920bf1df9 185 SUPERFAMILY SSF51182 51 182 2.19E-25 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily GYO_0820 5e6489502127a8f78f7b399920bf1df9 185 Gene3D G3DSA:1.10.260.40 2 79 1.1E-19 T 14-10-2018 GYO_1672 0871fe1d0a3312e6050576987f2d0e85 64 Gene3D G3DSA:1.10.8.910 5 64 7.9E-29 T 14-10-2018 IPR038300 SASP, alpha/beta-type superfamily GYO_1672 0871fe1d0a3312e6050576987f2d0e85 64 ProSitePatterns PS00684 Small, acid-soluble spore proteins, alpha/beta type, signature 2. 38 52 - T 14-10-2018 IPR018126 Small acid-soluble spore protein, alpha/beta-type, conserved site GO:0003690|GO:0006265 GYO_1672 0871fe1d0a3312e6050576987f2d0e85 64 Pfam PF00269 Small, acid-soluble spore proteins, alpha/beta type 5 59 2.7E-22 T 14-10-2018 IPR001448 Small acid-soluble spore protein, alpha/beta-type GO:0003690|GO:0006265 GYO_1672 0871fe1d0a3312e6050576987f2d0e85 64 ProSitePatterns PS00304 Small, acid-soluble spore proteins, alpha/beta type, signature 1. 20 29 - T 14-10-2018 IPR018126 Small acid-soluble spore protein, alpha/beta-type, conserved site GO:0003690|GO:0006265 GYO_3870 ce0c298f80afac0334a5edd24b4f4e19 110 Pfam PF06056 Putative ATPase subunit of terminase (gpP-like) 10 56 2.8E-4 T 14-10-2018 IPR010332 ATPase terminase subunit, putative GO:0005524|GO:0019069 GYO_3870 ce0c298f80afac0334a5edd24b4f4e19 110 SUPERFAMILY SSF46689 4 98 2.87E-14 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 GYO_1737 7d5858825eb9e71345c3775dab511231 303 Gene3D G3DSA:2.40.50.180 35 149 2.6E-34 T 14-10-2018 GYO_1737 7d5858825eb9e71345c3775dab511231 303 SUPERFAMILY SSF50341 8 153 2.88E-32 T 14-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 GYO_1737 7d5858825eb9e71345c3775dab511231 303 PIRSF PIRSF002867 2 303 7.6E-100 T 14-10-2018 IPR024181 Chemotaxis response regulator CheV GYO_1737 7d5858825eb9e71345c3775dab511231 303 Pfam PF01584 CheW-like domain 22 152 4.2E-33 T 14-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 GYO_1737 7d5858825eb9e71345c3775dab511231 303 SMART SM00260 14 149 2.7E-38 T 14-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 GYO_1737 7d5858825eb9e71345c3775dab511231 303 SUPERFAMILY SSF52172 174 297 3.84E-24 T 14-10-2018 IPR011006 CheY-like superfamily GYO_1737 7d5858825eb9e71345c3775dab511231 303 SMART SM00448 175 297 4.2E-25 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 GYO_1737 7d5858825eb9e71345c3775dab511231 303 Gene3D G3DSA:2.30.30.40 23 143 2.6E-34 T 14-10-2018 GYO_1737 7d5858825eb9e71345c3775dab511231 303 Pfam PF00072 Response regulator receiver domain 178 297 3.4E-27 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 GYO_1737 7d5858825eb9e71345c3775dab511231 303 Gene3D G3DSA:3.40.50.2300 171 302 4.7E-26 T 14-10-2018 GYO_2343 6bba565ee51f8fcec100d1c498a0f128 411 Gene3D G3DSA:3.90.1720.10 288 411 7.4E-34 T 14-10-2018 GYO_2343 6bba565ee51f8fcec100d1c498a0f128 411 SUPERFAMILY SSF54106 225 268 1.31E-11 T 14-10-2018 GYO_2343 6bba565ee51f8fcec100d1c498a0f128 411 Gene3D G3DSA:3.10.350.10 209 287 3.2E-18 T 14-10-2018 IPR036779 LysM domain superfamily GYO_2343 6bba565ee51f8fcec100d1c498a0f128 411 Gene3D G3DSA:3.10.350.10 15 85 2.8E-15 T 14-10-2018 IPR036779 LysM domain superfamily GYO_2343 6bba565ee51f8fcec100d1c498a0f128 411 Pfam PF00877 NlpC/P60 family 308 408 4.3E-29 T 14-10-2018 IPR000064 Endopeptidase, NLPC/P60 domain GYO_2343 6bba565ee51f8fcec100d1c498a0f128 411 SUPERFAMILY SSF54106 89 131 8.37E-11 T 14-10-2018 GYO_2343 6bba565ee51f8fcec100d1c498a0f128 411 SMART SM00257 158 201 3.6E-16 T 14-10-2018 IPR018392 LysM domain GYO_2343 6bba565ee51f8fcec100d1c498a0f128 411 SMART SM00257 28 71 1.2E-16 T 14-10-2018 IPR018392 LysM domain GYO_2343 6bba565ee51f8fcec100d1c498a0f128 411 SMART SM00257 226 269 5.9E-17 T 14-10-2018 IPR018392 LysM domain GYO_2343 6bba565ee51f8fcec100d1c498a0f128 411 SMART SM00257 89 132 1.2E-14 T 14-10-2018 IPR018392 LysM domain GYO_2343 6bba565ee51f8fcec100d1c498a0f128 411 SUPERFAMILY SSF54001 292 410 3.48E-33 T 14-10-2018 IPR038765 Papain-like cysteine peptidase superfamily GYO_2343 6bba565ee51f8fcec100d1c498a0f128 411 SUPERFAMILY SSF54106 27 71 1.31E-9 T 14-10-2018 GYO_2343 6bba565ee51f8fcec100d1c498a0f128 411 Pfam PF01476 LysM domain 159 201 2.4E-13 T 14-10-2018 IPR018392 LysM domain GYO_2343 6bba565ee51f8fcec100d1c498a0f128 411 Pfam PF01476 LysM domain 30 71 1.8E-13 T 14-10-2018 IPR018392 LysM domain GYO_2343 6bba565ee51f8fcec100d1c498a0f128 411 Pfam PF01476 LysM domain 227 268 1.1E-14 T 14-10-2018 IPR018392 LysM domain GYO_2343 6bba565ee51f8fcec100d1c498a0f128 411 Pfam PF01476 LysM domain 90 132 4.5E-13 T 14-10-2018 IPR018392 LysM domain GYO_2343 6bba565ee51f8fcec100d1c498a0f128 411 SUPERFAMILY SSF54106 157 201 1.96E-10 T 14-10-2018 GYO_2343 6bba565ee51f8fcec100d1c498a0f128 411 Gene3D G3DSA:3.10.350.10 154 207 2.9E-17 T 14-10-2018 IPR036779 LysM domain superfamily GYO_2343 6bba565ee51f8fcec100d1c498a0f128 411 Gene3D G3DSA:3.10.350.10 86 138 1.1E-18 T 14-10-2018 IPR036779 LysM domain superfamily GYO_0895 f59c1a60af074a793c832eaf6c3dc4f7 513 SUPERFAMILY SSF52402 188 406 3.31E-61 T 14-10-2018 GYO_0895 f59c1a60af074a793c832eaf6c3dc4f7 513 Pfam PF00958 GMP synthase C terminal domain 421 512 2.3E-44 T 14-10-2018 IPR001674 GMP synthase, C-terminal GO:0003922|GO:0005524|GO:0006164|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|Reactome: R-HSA-73817 GYO_0895 f59c1a60af074a793c832eaf6c3dc4f7 513 SUPERFAMILY SSF52317 7 228 1.45E-60 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like GYO_0895 f59c1a60af074a793c832eaf6c3dc4f7 513 Gene3D G3DSA:3.40.50.620 201 393 8.3E-77 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold GYO_0895 f59c1a60af074a793c832eaf6c3dc4f7 513 TIGRFAM TIGR00888 guaA_Nterm: GMP synthase (glutamine-hydrolyzing), N-terminal domain 9 196 2.6E-88 T 14-10-2018 IPR004739 GMP synthase, glutamine amidotransferase GO:0003922|GO:0005524|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|Reactome: R-HSA-73817 GYO_0895 f59c1a60af074a793c832eaf6c3dc4f7 513 PRINTS PR00097 Anthranilate synthase component II signature 80 91 4.3E-6 T 14-10-2018 GYO_0895 f59c1a60af074a793c832eaf6c3dc4f7 513 PRINTS PR00097 Anthranilate synthase component II signature 168 181 4.3E-6 T 14-10-2018 GYO_0895 f59c1a60af074a793c832eaf6c3dc4f7 513 PRINTS PR00097 Anthranilate synthase component II signature 53 62 4.3E-6 T 14-10-2018 GYO_0895 f59c1a60af074a793c832eaf6c3dc4f7 513 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 50 64 2.7E-6 T 14-10-2018 GYO_0895 f59c1a60af074a793c832eaf6c3dc4f7 513 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 9 23 2.7E-6 T 14-10-2018 GYO_0895 f59c1a60af074a793c832eaf6c3dc4f7 513 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 80 96 2.7E-6 T 14-10-2018 GYO_0895 f59c1a60af074a793c832eaf6c3dc4f7 513 PRINTS PR00096 Glutamine amidotransferase superfamily signature 53 62 4.9E-8 T 14-10-2018 GYO_0895 f59c1a60af074a793c832eaf6c3dc4f7 513 PRINTS PR00096 Glutamine amidotransferase superfamily signature 80 91 4.9E-8 T 14-10-2018 GYO_0895 f59c1a60af074a793c832eaf6c3dc4f7 513 PRINTS PR00096 Glutamine amidotransferase superfamily signature 168 181 4.9E-8 T 14-10-2018 GYO_0895 f59c1a60af074a793c832eaf6c3dc4f7 513 Pfam PF02540 NAD synthase 214 284 8.3E-6 T 14-10-2018 IPR022310 NAD/GMP synthase GYO_0895 f59c1a60af074a793c832eaf6c3dc4f7 513 Hamap MF_00344 GMP synthase [glutamine-hydrolyzing] [guaA]. 6 513 55.713 T 14-10-2018 IPR022955 GMP synthase GO:0003922|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221 GYO_0895 f59c1a60af074a793c832eaf6c3dc4f7 513 Pfam PF00117 Glutamine amidotransferase class-I 11 190 3.4E-45 T 14-10-2018 IPR017926 Glutamine amidotransferase GYO_0895 f59c1a60af074a793c832eaf6c3dc4f7 513 SUPERFAMILY SSF54810 393 513 2.35E-51 T 14-10-2018 GYO_0895 f59c1a60af074a793c832eaf6c3dc4f7 513 Gene3D G3DSA:3.30.300.10 394 513 6.4E-53 T 14-10-2018 GYO_0895 f59c1a60af074a793c832eaf6c3dc4f7 513 TIGRFAM TIGR00884 guaA_Cterm: GMP synthase (glutamine-hydrolyzing), C-terminal domain 203 513 1.5E-160 T 14-10-2018 IPR001674 GMP synthase, C-terminal GO:0003922|GO:0005524|GO:0006164|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|Reactome: R-HSA-73817 GYO_0895 f59c1a60af074a793c832eaf6c3dc4f7 513 Gene3D G3DSA:3.40.50.880 5 200 1.5E-58 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like GYO_0994 641e0334f5aced7b06eb82c1a5f9464d 409 Gene3D G3DSA:1.20.1250.20 8 198 1.9E-20 T 14-10-2018 GYO_0994 641e0334f5aced7b06eb82c1a5f9464d 409 SUPERFAMILY SSF103473 13 399 5.75E-54 T 14-10-2018 IPR036259 MFS transporter superfamily GYO_0994 641e0334f5aced7b06eb82c1a5f9464d 409 Pfam PF07690 Major Facilitator Superfamily 26 360 2.5E-28 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 GYO_0994 641e0334f5aced7b06eb82c1a5f9464d 409 Gene3D G3DSA:1.20.1250.20 221 404 2.0E-23 T 14-10-2018 GYO_2651 6421bbe256d5aa003f6f5a9dd3c24bca 474 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 300 322 9.5E-37 T 14-10-2018 GYO_2651 6421bbe256d5aa003f6f5a9dd3c24bca 474 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 183 201 9.5E-37 T 14-10-2018 GYO_2651 6421bbe256d5aa003f6f5a9dd3c24bca 474 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 7 26 9.5E-37 T 14-10-2018 GYO_2651 6421bbe256d5aa003f6f5a9dd3c24bca 474 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 272 288 9.5E-37 T 14-10-2018 GYO_2651 6421bbe256d5aa003f6f5a9dd3c24bca 474 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 144 162 9.5E-37 T 14-10-2018 GYO_2651 6421bbe256d5aa003f6f5a9dd3c24bca 474 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 5 335 5.0E-65 T 14-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 GYO_2651 6421bbe256d5aa003f6f5a9dd3c24bca 474 SUPERFAMILY SSF55424 351 473 7.04E-41 T 14-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 GYO_2651 6421bbe256d5aa003f6f5a9dd3c24bca 474 PIRSF PIRSF000350 1 471 4.6E-84 T 14-10-2018 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I GO:0009055|GO:0016491 GYO_2651 6421bbe256d5aa003f6f5a9dd3c24bca 474 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 355 463 4.0E-38 T 14-10-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 GYO_2651 6421bbe256d5aa003f6f5a9dd3c24bca 474 Gene3D G3DSA:3.30.390.30 354 474 8.8E-47 T 14-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 GYO_2651 6421bbe256d5aa003f6f5a9dd3c24bca 474 SUPERFAMILY SSF51905 1 378 4.66E-58 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily GYO_2651 6421bbe256d5aa003f6f5a9dd3c24bca 474 Gene3D G3DSA:3.50.50.60 5 340 8.1E-114 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily GYO_2651 6421bbe256d5aa003f6f5a9dd3c24bca 474 Gene3D G3DSA:3.50.50.60 156 279 8.1E-114 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily GYO_2651 6421bbe256d5aa003f6f5a9dd3c24bca 474 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 39 49 - T 14-10-2018 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 GYO_2651 6421bbe256d5aa003f6f5a9dd3c24bca 474 TIGRFAM TIGR01350 lipoamide_DH: dihydrolipoyl dehydrogenase 4 474 1.2E-187 T 14-10-2018 IPR006258 Dihydrolipoamide dehydrogenase GO:0004148|GO:0050660|GO:0055114 KEGG: 00010+1.8.1.4|KEGG: 00020+1.8.1.4|KEGG: 00260+1.8.1.4|KEGG: 00280+1.8.1.4|KEGG: 00620+1.8.1.4|KEGG: 00640+1.8.1.4|MetaCyc: PWY-5046|MetaCyc: PWY-5084|Reactome: R-HSA-204174|Reactome: R-HSA-389661|Reactome: R-HSA-5362517|Reactome: R-HSA-6783984|Reactome: R-HSA-70268|Reactome: R-HSA-70895|Reactome: R-HSA-71064|Reactome: R-HSA-71403 GYO_2651 6421bbe256d5aa003f6f5a9dd3c24bca 474 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 273 287 7.6E-69 T 14-10-2018 GYO_2651 6421bbe256d5aa003f6f5a9dd3c24bca 474 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 315 322 7.6E-69 T 14-10-2018 GYO_2651 6421bbe256d5aa003f6f5a9dd3c24bca 474 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 147 156 7.6E-69 T 14-10-2018 GYO_2651 6421bbe256d5aa003f6f5a9dd3c24bca 474 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 351 372 7.6E-69 T 14-10-2018 GYO_2651 6421bbe256d5aa003f6f5a9dd3c24bca 474 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 6 28 7.6E-69 T 14-10-2018 GYO_2651 6421bbe256d5aa003f6f5a9dd3c24bca 474 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 438 458 7.6E-69 T 14-10-2018 GYO_2651 6421bbe256d5aa003f6f5a9dd3c24bca 474 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 183 208 7.6E-69 T 14-10-2018 GYO_2651 6421bbe256d5aa003f6f5a9dd3c24bca 474 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 38 53 7.6E-69 T 14-10-2018 GYO_2651 6421bbe256d5aa003f6f5a9dd3c24bca 474 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 416 431 7.6E-69 T 14-10-2018 GYO_1047 841ef55bd55868d92cd90fa3f908d888 238 SMART SM00345 9 68 3.7E-15 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 GYO_1047 841ef55bd55868d92cd90fa3f908d888 238 SUPERFAMILY SSF64288 75 234 9.58E-44 T 14-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily GYO_1047 841ef55bd55868d92cd90fa3f908d888 238 SUPERFAMILY SSF46785 4 77 2.68E-18 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily GYO_1047 841ef55bd55868d92cd90fa3f908d888 238 Pfam PF00392 Bacterial regulatory proteins, gntR family 8 68 2.5E-16 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 GYO_1047 841ef55bd55868d92cd90fa3f908d888 238 Pfam PF07702 UTRA domain 91 229 6.9E-34 T 14-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 GYO_1047 841ef55bd55868d92cd90fa3f908d888 238 Gene3D G3DSA:1.10.10.10 5 73 3.4E-19 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily GYO_1047 841ef55bd55868d92cd90fa3f908d888 238 SMART SM00866 90 229 8.4E-31 T 14-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 GYO_1047 841ef55bd55868d92cd90fa3f908d888 238 TIGRFAM TIGR02404 trehalos_R_Bsub: trehalose operon repressor 5 236 2.9E-110 T 14-10-2018 IPR012770 Trehalose operon transcriptional repressor GYO_1047 841ef55bd55868d92cd90fa3f908d888 238 Gene3D G3DSA:3.40.1410.10 88 228 6.3E-33 T 14-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily GYO_1047 841ef55bd55868d92cd90fa3f908d888 238 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 28 42 9.0E-9 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 GYO_1047 841ef55bd55868d92cd90fa3f908d888 238 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 42 58 9.0E-9 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 GYO_1901 58a598fcb5668b0866652b32c90f6b5b 1071 SMART SM01096 420 540 7.8E-66 T 14-10-2018 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 GYO_1901 58a598fcb5668b0866652b32c90f6b5b 1071 Gene3D G3DSA:3.40.50.20 1 116 3.6E-49 T 14-10-2018 GYO_1901 58a598fcb5668b0866652b32c90f6b5b 1071 Gene3D G3DSA:3.30.470.20 659 929 3.8E-110 T 14-10-2018 GYO_1901 58a598fcb5668b0866652b32c90f6b5b 1071 Gene3D G3DSA:3.40.50.20 547 655 2.4E-45 T 14-10-2018 GYO_1901 58a598fcb5668b0866652b32c90f6b5b 1071 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 164 178 - T 14-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 GYO_1901 58a598fcb5668b0866652b32c90f6b5b 1071 Hamap MF_01210_A Carbamoyl-phosphate synthase large chain [carB]. 5 1067 13.613 T 14-10-2018 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 GYO_1901 58a598fcb5668b0866652b32c90f6b5b 1071 Hamap MF_01210_B Carbamoyl-phosphate synthase large chain [carB]. 1 1057 13.191 T 14-10-2018 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 GYO_1901 58a598fcb5668b0866652b32c90f6b5b 1071 Gene3D G3DSA:3.30.470.20 120 401 2.3E-124 T 14-10-2018 GYO_1901 58a598fcb5668b0866652b32c90f6b5b 1071 SMART SM01209 674 836 0.0064 T 14-10-2018 GYO_1901 58a598fcb5668b0866652b32c90f6b5b 1071 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 128 333 8.9E-78 T 14-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 GYO_1901 58a598fcb5668b0866652b32c90f6b5b 1071 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 666 866 4.4E-41 T 14-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 GYO_1901 58a598fcb5668b0866652b32c90f6b5b 1071 SUPERFAMILY SSF52440 1 127 2.45E-50 T 14-10-2018 IPR016185 Pre-ATP-grasp domain superfamily GYO_1901 58a598fcb5668b0866652b32c90f6b5b 1071 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 830 837 - T 14-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 GYO_1901 58a598fcb5668b0866652b32c90f6b5b 1071 SUPERFAMILY SSF52335 935 1055 2.35E-32 T 14-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily GYO_1901 58a598fcb5668b0866652b32c90f6b5b 1071 SMART SM00851 949 1036 1.3E-27 T 14-10-2018 IPR011607 Methylglyoxal synthase-like domain GYO_1901 58a598fcb5668b0866652b32c90f6b5b 1071 TIGRFAM TIGR01369 CPSaseII_lrg: carbamoyl-phosphate synthase, large subunit 2 1047 0.0 T 14-10-2018 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 GYO_1901 58a598fcb5668b0866652b32c90f6b5b 1071 Gene3D G3DSA:1.10.1030.10 403 546 6.7E-45 T 14-10-2018 IPR036897 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain superfamily KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 GYO_1901 58a598fcb5668b0866652b32c90f6b5b 1071 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 296 303 - T 14-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 GYO_1901 58a598fcb5668b0866652b32c90f6b5b 1071 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 702 716 - T 14-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 GYO_1901 58a598fcb5668b0866652b32c90f6b5b 1071 SUPERFAMILY SSF56059 666 927 9.55E-103 T 14-10-2018 GYO_1901 58a598fcb5668b0866652b32c90f6b5b 1071 Pfam PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain 423 540 6.8E-40 T 14-10-2018 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 GYO_1901 58a598fcb5668b0866652b32c90f6b5b 1071 SUPERFAMILY SSF48108 395 546 5.23E-49 T 14-10-2018 IPR036897 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain superfamily KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 GYO_1901 58a598fcb5668b0866652b32c90f6b5b 1071 Pfam PF02142 MGS-like domain 951 1036 9.6E-19 T 14-10-2018 IPR011607 Methylglyoxal synthase-like domain GYO_1901 58a598fcb5668b0866652b32c90f6b5b 1071 SUPERFAMILY SSF52440 549 668 1.44E-47 T 14-10-2018 IPR016185 Pre-ATP-grasp domain superfamily GYO_1901 58a598fcb5668b0866652b32c90f6b5b 1071 Gene3D G3DSA:3.40.50.1380 930 1064 2.7E-36 T 14-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily GYO_1901 58a598fcb5668b0866652b32c90f6b5b 1071 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 378 396 6.5E-64 T 14-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 GYO_1901 58a598fcb5668b0866652b32c90f6b5b 1071 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 168 180 6.5E-64 T 14-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 GYO_1901 58a598fcb5668b0866652b32c90f6b5b 1071 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 239 256 6.5E-64 T 14-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 GYO_1901 58a598fcb5668b0866652b32c90f6b5b 1071 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 48 58 6.5E-64 T 14-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 GYO_1901 58a598fcb5668b0866652b32c90f6b5b 1071 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 296 325 6.5E-64 T 14-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 GYO_1901 58a598fcb5668b0866652b32c90f6b5b 1071 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 19 33 6.5E-64 T 14-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 GYO_1901 58a598fcb5668b0866652b32c90f6b5b 1071 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 204 223 6.5E-64 T 14-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 GYO_1901 58a598fcb5668b0866652b32c90f6b5b 1071 SUPERFAMILY SSF56059 128 399 6.19E-108 T 14-10-2018 GYO_3093 c95e5b510fe6e3dc0e78c4a7399192c4 409 SUPERFAMILY SSF55021 249 325 2.54E-14 T 14-10-2018 GYO_3093 c95e5b510fe6e3dc0e78c4a7399192c4 409 SUPERFAMILY SSF55021 329 404 1.22E-22 T 14-10-2018 GYO_3093 c95e5b510fe6e3dc0e78c4a7399192c4 409 Pfam PF00696 Amino acid kinase family 3 229 2.5E-52 T 14-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 GYO_3093 c95e5b510fe6e3dc0e78c4a7399192c4 409 ProSitePatterns PS00324 Aspartokinase signature. 5 13 - T 14-10-2018 IPR018042 Aspartate kinase, conserved site GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 GYO_3093 c95e5b510fe6e3dc0e78c4a7399192c4 409 Gene3D G3DSA:3.30.70.260 260 337 5.2E-48 T 14-10-2018 GYO_3093 c95e5b510fe6e3dc0e78c4a7399192c4 409 Gene3D G3DSA:3.30.70.260 255 402 5.2E-48 T 14-10-2018 GYO_3093 c95e5b510fe6e3dc0e78c4a7399192c4 409 Pfam PF01842 ACT domain 275 327 7.8E-8 T 14-10-2018 IPR002912 ACT domain GYO_3093 c95e5b510fe6e3dc0e78c4a7399192c4 409 SUPERFAMILY SSF53633 3 242 3.01E-73 T 14-10-2018 IPR036393 Acetylglutamate kinase-like superfamily GYO_3093 c95e5b510fe6e3dc0e78c4a7399192c4 409 TIGRFAM TIGR00656 asp_kin_monofn: aspartate kinase, monofunctional class 1 402 1.5E-163 T 14-10-2018 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 GYO_3093 c95e5b510fe6e3dc0e78c4a7399192c4 409 TIGRFAM TIGR00657 asp_kinases: aspartate kinase 63 401 6.2E-129 T 14-10-2018 IPR001341 Aspartate kinase GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 GYO_3093 c95e5b510fe6e3dc0e78c4a7399192c4 409 Pfam PF13840 ACT domain 335 398 1.7E-15 T 14-10-2018 IPR027795 CASTOR, ACT domain GYO_3093 c95e5b510fe6e3dc0e78c4a7399192c4 409 Gene3D G3DSA:3.40.1160.10 1 254 6.7E-91 T 14-10-2018 IPR036393 Acetylglutamate kinase-like superfamily GYO_3093 c95e5b510fe6e3dc0e78c4a7399192c4 409 PIRSF PIRSF000726 59 409 4.3E-143 T 14-10-2018 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 GYO_3093 c95e5b510fe6e3dc0e78c4a7399192c4 409 PIRSF PIRSF000726 1 62 7.0E-22 T 14-10-2018 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 GYO_0138 dc61cf6ac7f849fe6d9693aaf298e08a 156 Pfam PF00177 Ribosomal protein S7p/S5e 1 149 4.1E-67 T 14-10-2018 IPR023798 Ribosomal protein S7 domain GYO_0138 dc61cf6ac7f849fe6d9693aaf298e08a 156 TIGRFAM TIGR01029 rpsG_bact: ribosomal protein uS7 3 156 8.2E-72 T 14-10-2018 IPR005717 Ribosomal protein S7, bacterial/organellar-type GO:0003735|GO:0006412|GO:0015935 GYO_0138 dc61cf6ac7f849fe6d9693aaf298e08a 156 PIRSF PIRSF002122 5 156 4.0E-60 T 14-10-2018 IPR000235 Ribosomal protein S5/S7 GO:0006412 GYO_0138 dc61cf6ac7f849fe6d9693aaf298e08a 156 ProSitePatterns PS00052 Ribosomal protein S7 signature. 20 46 - T 14-10-2018 IPR020606 Ribosomal protein S7, conserved site GO:0003723|GO:0003735|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 GYO_0138 dc61cf6ac7f849fe6d9693aaf298e08a 156 SUPERFAMILY SSF47973 1 149 4.45E-62 T 14-10-2018 IPR036823 Ribosomal protein S7 domain superfamily GYO_0138 dc61cf6ac7f849fe6d9693aaf298e08a 156 Hamap MF_00480_B 30S ribosomal protein S7 [rpsG]. 1 156 35.741 T 14-10-2018 IPR005717 Ribosomal protein S7, bacterial/organellar-type GO:0003735|GO:0006412|GO:0015935 GYO_0138 dc61cf6ac7f849fe6d9693aaf298e08a 156 Gene3D G3DSA:1.10.455.10 2 156 1.4E-65 T 14-10-2018 IPR036823 Ribosomal protein S7 domain superfamily GYO_1266 b48f7c6c7db87c5e7f26641601d4ee9c 67 ProSitePatterns PS00304 Small, acid-soluble spore proteins, alpha/beta type, signature 1. 23 32 - T 14-10-2018 IPR018126 Small acid-soluble spore protein, alpha/beta-type, conserved site GO:0003690|GO:0006265 GYO_1266 b48f7c6c7db87c5e7f26641601d4ee9c 67 Gene3D G3DSA:1.10.8.910 9 67 8.8E-31 T 14-10-2018 IPR038300 SASP, alpha/beta-type superfamily GYO_1266 b48f7c6c7db87c5e7f26641601d4ee9c 67 Pfam PF00269 Small, acid-soluble spore proteins, alpha/beta type 8 62 1.3E-21 T 14-10-2018 IPR001448 Small acid-soluble spore protein, alpha/beta-type GO:0003690|GO:0006265 GYO_1266 b48f7c6c7db87c5e7f26641601d4ee9c 67 ProSitePatterns PS00684 Small, acid-soluble spore proteins, alpha/beta type, signature 2. 41 55 - T 14-10-2018 IPR018126 Small acid-soluble spore protein, alpha/beta-type, conserved site GO:0003690|GO:0006265 GYO_2004 9049ee0167d3d4ff6a83fff549a8cb76 246 ProSitePatterns PS00962 Ribosomal protein S2 signature 1. 6 17 - T 14-10-2018 IPR018130 Ribosomal protein S2, conserved site GO:0003735|GO:0005840|GO:0006412 GYO_2004 9049ee0167d3d4ff6a83fff549a8cb76 246 Hamap MF_00291_B 30S ribosomal protein S2 [rpsB]. 2 228 44.407 T 14-10-2018 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 GYO_2004 9049ee0167d3d4ff6a83fff549a8cb76 246 PRINTS PR00395 Ribosomal protein S2 signature 158 175 2.6E-42 T 14-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 GYO_2004 9049ee0167d3d4ff6a83fff549a8cb76 246 PRINTS PR00395 Ribosomal protein S2 signature 196 210 2.6E-42 T 14-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 GYO_2004 9049ee0167d3d4ff6a83fff549a8cb76 246 PRINTS PR00395 Ribosomal protein S2 signature 6 24 2.6E-42 T 14-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 GYO_2004 9049ee0167d3d4ff6a83fff549a8cb76 246 PRINTS PR00395 Ribosomal protein S2 signature 37 46 2.6E-42 T 14-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 GYO_2004 9049ee0167d3d4ff6a83fff549a8cb76 246 PRINTS PR00395 Ribosomal protein S2 signature 87 104 2.6E-42 T 14-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 GYO_2004 9049ee0167d3d4ff6a83fff549a8cb76 246 PRINTS PR00395 Ribosomal protein S2 signature 175 186 2.6E-42 T 14-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 GYO_2004 9049ee0167d3d4ff6a83fff549a8cb76 246 Gene3D G3DSA:1.10.287.610 97 152 1.1E-97 T 14-10-2018 GYO_2004 9049ee0167d3d4ff6a83fff549a8cb76 246 ProSitePatterns PS00963 Ribosomal protein S2 signature 2. 158 182 - T 14-10-2018 IPR018130 Ribosomal protein S2, conserved site GO:0003735|GO:0005840|GO:0006412 GYO_2004 9049ee0167d3d4ff6a83fff549a8cb76 246 TIGRFAM TIGR01011 rpsB_bact: ribosomal protein uS2 3 226 5.9E-115 T 14-10-2018 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 GYO_2004 9049ee0167d3d4ff6a83fff549a8cb76 246 SUPERFAMILY SSF52313 6 231 5.76E-102 T 14-10-2018 IPR023591 Ribosomal protein S2, flavodoxin-like domain superfamily GYO_2004 9049ee0167d3d4ff6a83fff549a8cb76 246 Pfam PF00318 Ribosomal protein S2 9 224 2.5E-103 T 14-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 GYO_2004 9049ee0167d3d4ff6a83fff549a8cb76 246 Gene3D G3DSA:3.40.50.10490 10 215 1.1E-97 T 14-10-2018 GYO_3198 d24110eaa9cf31c0de43bc31a86eeec3 335 Gene3D G3DSA:3.90.226.10 61 276 1.4E-91 T 14-10-2018 GYO_3198 d24110eaa9cf31c0de43bc31a86eeec3 335 TIGRFAM TIGR00706 SppA_dom: signal peptide peptidase SppA, 36K type 59 280 2.3E-90 T 14-10-2018 IPR004635 Peptidase S49, SppA GO:0006508|GO:0008233 GYO_3198 d24110eaa9cf31c0de43bc31a86eeec3 335 Pfam PF01343 Peptidase family S49 130 280 2.7E-60 T 14-10-2018 IPR002142 Peptidase S49 GO:0006508|GO:0008233 GYO_3198 d24110eaa9cf31c0de43bc31a86eeec3 335 SUPERFAMILY SSF52096 56 268 2.64E-41 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily GYO_3198 d24110eaa9cf31c0de43bc31a86eeec3 335 Gene3D G3DSA:3.40.1750.20 171 237 1.4E-91 T 14-10-2018 GYO_3162 5101e65574525fe83bb758acb126361d 240 Pfam PF00072 Response regulator receiver domain 5 114 3.9E-31 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 GYO_3162 5101e65574525fe83bb758acb126361d 240 Gene3D G3DSA:1.10.10.10 135 239 6.1E-35 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily GYO_3162 5101e65574525fe83bb758acb126361d 240 Pfam PF00486 Transcriptional regulatory protein, C terminal 158 233 2.4E-28 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 GYO_3162 5101e65574525fe83bb758acb126361d 240 SUPERFAMILY SSF46894 137 234 1.16E-30 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 GYO_3162 5101e65574525fe83bb758acb126361d 240 SUPERFAMILY SSF52172 2 127 7.97E-44 T 14-10-2018 IPR011006 CheY-like superfamily GYO_3162 5101e65574525fe83bb758acb126361d 240 Gene3D G3DSA:3.40.50.2300 1 134 5.8E-41 T 14-10-2018 GYO_3162 5101e65574525fe83bb758acb126361d 240 SMART SM00862 157 233 1.1E-26 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 GYO_3162 5101e65574525fe83bb758acb126361d 240 SMART SM00448 3 114 1.2E-49 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 GYO_3664 c2ca11cf43476b04e12c2a5ca252f050 69 PRINTS PR00944 Copper ion binding protein signature 28 41 1.6E-9 T 14-10-2018 IPR000428 Copper ion binding protein GO:0005507|GO:0006825 GYO_3664 c2ca11cf43476b04e12c2a5ca252f050 69 PRINTS PR00944 Copper ion binding protein signature 15 28 1.6E-9 T 14-10-2018 IPR000428 Copper ion binding protein GO:0005507|GO:0006825 GYO_3664 c2ca11cf43476b04e12c2a5ca252f050 69 PRINTS PR00944 Copper ion binding protein signature 54 67 1.6E-9 T 14-10-2018 IPR000428 Copper ion binding protein GO:0005507|GO:0006825 GYO_3664 c2ca11cf43476b04e12c2a5ca252f050 69 PRINTS PR00944 Copper ion binding protein signature 3 15 1.6E-9 T 14-10-2018 IPR000428 Copper ion binding protein GO:0005507|GO:0006825 GYO_3664 c2ca11cf43476b04e12c2a5ca252f050 69 TIGRFAM TIGR00003 TIGR00003: copper ion binding protein 3 68 7.2E-35 T 14-10-2018 IPR006122 Heavy metal-associated domain, copper ion-binding GO:0005507 Reactome: R-HSA-936837 GYO_3664 c2ca11cf43476b04e12c2a5ca252f050 69 SUPERFAMILY SSF55008 2 67 6.94E-22 T 14-10-2018 IPR036163 Heavy metal-associated domain superfamily GO:0030001|GO:0046872 GYO_3664 c2ca11cf43476b04e12c2a5ca252f050 69 Gene3D G3DSA:3.30.70.100 1 68 1.4E-26 T 14-10-2018 GYO_3664 c2ca11cf43476b04e12c2a5ca252f050 69 Pfam PF00403 Heavy-metal-associated domain 5 66 2.5E-18 T 14-10-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 GYO_3664 c2ca11cf43476b04e12c2a5ca252f050 69 ProSitePatterns PS01047 Heavy-metal-associated domain. 8 37 - T 14-10-2018 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 GYO_1654 77355b4a318c559382933ededdd174c1 451 Pfam PF00571 CBS domain 137 192 1.5E-5 T 14-10-2018 IPR000644 CBS domain GYO_1654 77355b4a318c559382933ededdd174c1 451 Pfam PF00571 CBS domain 200 254 2.3E-8 T 14-10-2018 IPR000644 CBS domain GYO_1654 77355b4a318c559382933ededdd174c1 451 Gene3D G3DSA:1.10.357.20 273 448 6.0E-60 T 14-10-2018 IPR038048 Magnesium transporter MgtE, transmembrane domain GYO_1654 77355b4a318c559382933ededdd174c1 451 Pfam PF01769 Divalent cation transporter 320 441 1.3E-30 T 14-10-2018 IPR006667 SLC41 divalent cation transporters, integral membrane domain GO:0006812|GO:0008324 GYO_1654 77355b4a318c559382933ededdd174c1 451 Gene3D G3DSA:3.10.580.10 133 259 1.8E-41 T 14-10-2018 GYO_1654 77355b4a318c559382933ededdd174c1 451 SUPERFAMILY SSF158791 8 132 2.09E-25 T 14-10-2018 GYO_1654 77355b4a318c559382933ededdd174c1 451 SMART SM00924 33 136 5.3E-26 T 14-10-2018 IPR006668 Magnesium transporter, MgtE intracellular domain GYO_1654 77355b4a318c559382933ededdd174c1 451 TIGRFAM TIGR00400 mgtE: magnesium transporter 4 451 8.7E-219 T 14-10-2018 IPR006669 Magnesium transporter MgtE GO:0015095|GO:0015693|GO:0016020 GYO_1654 77355b4a318c559382933ededdd174c1 451 SUPERFAMILY SSF54631 135 266 5.56E-30 T 14-10-2018 GYO_1654 77355b4a318c559382933ededdd174c1 451 SUPERFAMILY SSF161093 281 448 5.23E-52 T 14-10-2018 IPR036739 SLC41 divalent cation transporters, integral membrane domain superfamily GO:0006812|GO:0008324 GYO_1654 77355b4a318c559382933ededdd174c1 451 Pfam PF03448 MgtE intracellular N domain 33 134 3.0E-20 T 14-10-2018 IPR006668 Magnesium transporter, MgtE intracellular domain GYO_1654 77355b4a318c559382933ededdd174c1 451 Gene3D G3DSA:1.25.60.10 2 131 3.4E-19 T 14-10-2018 IPR038076 MgtE, N-terminal domain superfamily GYO_1654 77355b4a318c559382933ededdd174c1 451 SMART SM00116 143 196 14.0 T 14-10-2018 IPR000644 CBS domain GYO_1654 77355b4a318c559382933ededdd174c1 451 SMART SM00116 207 255 1.0E-7 T 14-10-2018 IPR000644 CBS domain GYO_0069 e59db1d4314a6963bd1adfdc94f3e770 376 TIGRFAM TIGR00444 mazG: MazG family protein 126 370 1.3E-124 T 14-10-2018 IPR011551 NTP pyrophosphohydrolase MazG GYO_0069 e59db1d4314a6963bd1adfdc94f3e770 376 SUPERFAMILY SSF53790 1 144 4.14E-11 T 14-10-2018 IPR035996 Tetrapyrrole methylase superfamily GO:0008168 Reactome: R-HSA-5358493 GYO_0069 e59db1d4314a6963bd1adfdc94f3e770 376 PIRSF PIRSF002845 1 374 1.4E-185 T 14-10-2018 IPR024180 Bifunctional tetrapyrrole methylase/MazG NTP pyrophosphohydrolase, predicted GYO_0069 e59db1d4314a6963bd1adfdc94f3e770 376 Gene3D G3DSA:1.10.287.1080 116 239 4.4E-44 T 14-10-2018 GYO_0069 e59db1d4314a6963bd1adfdc94f3e770 376 Pfam PF03819 MazG nucleotide pyrophosphohydrolase domain 142 215 8.1E-30 T 14-10-2018 IPR004518 NTP pyrophosphohydrolase MazG, putative catalytic core GYO_0069 e59db1d4314a6963bd1adfdc94f3e770 376 Pfam PF03819 MazG nucleotide pyrophosphohydrolase domain 281 339 7.6E-8 T 14-10-2018 IPR004518 NTP pyrophosphohydrolase MazG, putative catalytic core GYO_0069 e59db1d4314a6963bd1adfdc94f3e770 376 Gene3D G3DSA:1.10.287.1080 243 374 1.2E-45 T 14-10-2018 GYO_0069 e59db1d4314a6963bd1adfdc94f3e770 376 SUPERFAMILY SSF101386 249 350 2.62E-24 T 14-10-2018 GYO_0069 e59db1d4314a6963bd1adfdc94f3e770 376 SUPERFAMILY SSF101386 118 219 8.87E-26 T 14-10-2018 GYO_3400 ca5e989e8e22e253158ea89744159997 328 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 2 119 5.1E-25 T 14-10-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 GYO_3400 ca5e989e8e22e253158ea89744159997 328 SUPERFAMILY SSF55347 127 291 8.99E-29 T 14-10-2018 GYO_3400 ca5e989e8e22e253158ea89744159997 328 Gene3D G3DSA:3.30.360.10 134 327 2.2E-63 T 14-10-2018 GYO_3400 ca5e989e8e22e253158ea89744159997 328 Gene3D G3DSA:3.40.50.720 1 133 2.0E-39 T 14-10-2018 GYO_3400 ca5e989e8e22e253158ea89744159997 328 SUPERFAMILY SSF51735 2 152 1.32E-48 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily GYO_2375 3a8189030418e6e08eca6026e947ff8a 74 Pfam PF06855 YozE SAM-like fold 3 68 9.6E-29 T 14-10-2018 IPR023089 YozE SAM-like domain GYO_2375 3a8189030418e6e08eca6026e947ff8a 74 Gene3D G3DSA:1.10.150.260 1 72 1.2E-31 T 14-10-2018 IPR036806 YozE SAM-like superfamily GYO_2375 3a8189030418e6e08eca6026e947ff8a 74 Hamap MF_01538 UPF0346 protein . 1 70 23.265 T 14-10-2018 IPR010673 Protein of unknown function UPF0346 GYO_2375 3a8189030418e6e08eca6026e947ff8a 74 PIRSF PIRSF037262 1 72 3.4E-36 T 14-10-2018 IPR010673 Protein of unknown function UPF0346 GYO_2375 3a8189030418e6e08eca6026e947ff8a 74 SUPERFAMILY SSF140652 1 72 1.03E-30 T 14-10-2018 IPR036806 YozE SAM-like superfamily GYO_3290 0c1dac522458d9f0ed101a14d8111af1 334 SUPERFAMILY SSF55874 175 323 5.63E-29 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily GYO_3290 0c1dac522458d9f0ed101a14d8111af1 334 PRINTS PR00344 Bacterial sensor protein C-terminal signature 252 266 9.5E-7 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 GYO_3290 0c1dac522458d9f0ed101a14d8111af1 334 PRINTS PR00344 Bacterial sensor protein C-terminal signature 286 304 9.5E-7 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 GYO_3290 0c1dac522458d9f0ed101a14d8111af1 334 PRINTS PR00344 Bacterial sensor protein C-terminal signature 310 323 9.5E-7 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 GYO_3290 0c1dac522458d9f0ed101a14d8111af1 334 PRINTS PR00344 Bacterial sensor protein C-terminal signature 270 280 9.5E-7 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 GYO_3290 0c1dac522458d9f0ed101a14d8111af1 334 SMART SM00387 216 326 6.7E-23 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase GYO_3290 0c1dac522458d9f0ed101a14d8111af1 334 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 217 325 6.2E-19 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase GYO_3290 0c1dac522458d9f0ed101a14d8111af1 334 Gene3D G3DSA:1.10.287.130 123 174 1.6E-30 T 14-10-2018 GYO_3290 0c1dac522458d9f0ed101a14d8111af1 334 Gene3D G3DSA:3.30.565.10 175 323 1.6E-30 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily GYO_0714 8d08c8cfc02569f2db92541e40e9d1be 428 PIRSF PIRSF006060 2 423 1.3E-53 T 14-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 GYO_0714 8d08c8cfc02569f2db92541e40e9d1be 428 Gene3D G3DSA:1.20.1740.10 5 428 1.7E-63 T 14-10-2018 GYO_0714 8d08c8cfc02569f2db92541e40e9d1be 428 Pfam PF13520 Amino acid permease 9 400 4.9E-36 T 14-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 GYO_1621 d4be390eb757cec43347734d4ab30c4e 286 SUPERFAMILY SSF55909 7 285 2.5E-82 T 14-10-2018 GYO_1621 d4be390eb757cec43347734d4ab30c4e 286 Pfam PF02274 Amidinotransferase 26 284 2.6E-50 T 14-10-2018 GYO_1621 d4be390eb757cec43347734d4ab30c4e 286 Gene3D G3DSA:3.75.10.10 6 286 5.7E-81 T 14-10-2018 GYO_4513 ae25b4bc075b36bce2f0bb941b96c0ce 155 Pfam PF06713 Bacterial PH domain 70 145 5.8E-21 T 14-10-2018 IPR009589 Sublancin immunity protein SunI GO:0030153 GYO_0595 c3645447e5359e933b6e07e27065a613 454 ProSitePatterns PS00324 Aspartokinase signature. 3 11 - T 14-10-2018 IPR018042 Aspartate kinase, conserved site GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 GYO_0595 c3645447e5359e933b6e07e27065a613 454 Gene3D G3DSA:3.40.1160.10 3 287 5.8E-73 T 14-10-2018 IPR036393 Acetylglutamate kinase-like superfamily GYO_0595 c3645447e5359e933b6e07e27065a613 454 TIGRFAM TIGR00657 asp_kinases: aspartate kinase 3 448 5.2E-76 T 14-10-2018 IPR001341 Aspartate kinase GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 GYO_0595 c3645447e5359e933b6e07e27065a613 454 Pfam PF13840 ACT domain 381 444 4.9E-7 T 14-10-2018 IPR027795 CASTOR, ACT domain GYO_0595 c3645447e5359e933b6e07e27065a613 454 Gene3D G3DSA:3.30.2130.10 289 451 9.7E-54 T 14-10-2018 GYO_0595 c3645447e5359e933b6e07e27065a613 454 PIRSF PIRSF000726 1 451 5.2E-73 T 14-10-2018 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 GYO_0595 c3645447e5359e933b6e07e27065a613 454 SUPERFAMILY SSF53633 1 289 5.37E-65 T 14-10-2018 IPR036393 Acetylglutamate kinase-like superfamily GYO_0595 c3645447e5359e933b6e07e27065a613 454 Gene3D G3DSA:1.20.120.1320 39 135 5.8E-73 T 14-10-2018 GYO_0595 c3645447e5359e933b6e07e27065a613 454 SUPERFAMILY SSF55021 296 362 1.37E-6 T 14-10-2018 GYO_0595 c3645447e5359e933b6e07e27065a613 454 SUPERFAMILY SSF55021 371 449 7.63E-21 T 14-10-2018 GYO_0595 c3645447e5359e933b6e07e27065a613 454 Pfam PF00696 Amino acid kinase family 2 276 4.4E-39 T 14-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 GYO_4084 e58451dcafb44fd69c2db6a9ffcbc00a 427 SUPERFAMILY SSF52540 92 370 6.88E-67 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase GYO_4084 e58451dcafb44fd69c2db6a9ffcbc00a 427 Hamap MF_01884 Transcription termination factor Rho [rho]. 1 416 222.096 T 14-10-2018 IPR004665 Transcription termination factor Rho GO:0003723|GO:0005524|GO:0006353|GO:0008186 GYO_4084 e58451dcafb44fd69c2db6a9ffcbc00a 427 Gene3D G3DSA:3.40.50.300 132 414 1.1E-122 T 14-10-2018 GYO_4084 e58451dcafb44fd69c2db6a9ffcbc00a 427 Gene3D G3DSA:2.40.50.140 50 125 9.2E-29 T 14-10-2018 GYO_4084 e58451dcafb44fd69c2db6a9ffcbc00a 427 SMART SM00357 55 120 7.8E-20 T 14-10-2018 IPR011129 Cold shock domain GO:0003676 GYO_4084 e58451dcafb44fd69c2db6a9ffcbc00a 427 SUPERFAMILY SSF68912 5 49 2.55E-10 T 14-10-2018 IPR036269 Rho termination factor, N-terminal domain superfamily GYO_4084 e58451dcafb44fd69c2db6a9ffcbc00a 427 Pfam PF07497 Rho termination factor, RNA-binding domain 54 127 3.3E-31 T 14-10-2018 IPR011113 Rho termination factor, RNA-binding domain GO:0003723|GO:0006353 GYO_4084 e58451dcafb44fd69c2db6a9ffcbc00a 427 TIGRFAM TIGR00767 rho: transcription termination factor Rho 5 414 4.6E-207 T 14-10-2018 IPR004665 Transcription termination factor Rho GO:0003723|GO:0005524|GO:0006353|GO:0008186 GYO_4084 e58451dcafb44fd69c2db6a9ffcbc00a 427 Pfam PF07498 Rho termination factor, N-terminal domain 9 49 8.4E-15 T 14-10-2018 IPR011112 Rho termination factor, N-terminal GO:0006353 GYO_4084 e58451dcafb44fd69c2db6a9ffcbc00a 427 SMART SM00959 8 50 2.7E-14 T 14-10-2018 IPR011112 Rho termination factor, N-terminal GO:0006353 GYO_4084 e58451dcafb44fd69c2db6a9ffcbc00a 427 SMART SM00382 169 354 2.8E-8 T 14-10-2018 IPR003593 AAA+ ATPase domain GYO_4084 e58451dcafb44fd69c2db6a9ffcbc00a 427 SUPERFAMILY SSF50249 52 127 4.57E-24 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold GYO_4084 e58451dcafb44fd69c2db6a9ffcbc00a 427 Gene3D G3DSA:1.10.720.10 1 48 8.2E-22 T 14-10-2018 GYO_4084 e58451dcafb44fd69c2db6a9ffcbc00a 427 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 158 362 3.8E-19 T 14-10-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 GYO_3539 893fdb8f4fc3829eab41c068711ce32d 116 ProSitePatterns PS00769 Transthyretin signature 2. 99 111 - T 14-10-2018 IPR023419 Transthyretin, conserved site Reactome: R-HSA-2453864|Reactome: R-HSA-2453902|Reactome: R-HSA-3000171|Reactome: R-HSA-6798695|Reactome: R-HSA-975634|Reactome: R-HSA-977225 GYO_3539 893fdb8f4fc3829eab41c068711ce32d 116 TIGRFAM TIGR02962 hdxy_isourate: hydroxyisourate hydrolase 2 116 3.7E-38 T 14-10-2018 IPR014306 Hydroxyisourate hydrolase GO:0006144|GO:0033971 KEGG: 00230+3.5.2.17|MetaCyc: PWY-5691|MetaCyc: PWY-7394|MetaCyc: PWY-7849 GYO_3539 893fdb8f4fc3829eab41c068711ce32d 116 PRINTS PR00189 Transthyretin signature 3 23 7.1E-6 T 14-10-2018 IPR000895 Transthyretin/hydroxyisourate hydrolase Reactome: R-HSA-2453864|Reactome: R-HSA-2453902|Reactome: R-HSA-3000171|Reactome: R-HSA-6798695|Reactome: R-HSA-975634|Reactome: R-HSA-977225 GYO_3539 893fdb8f4fc3829eab41c068711ce32d 116 PRINTS PR00189 Transthyretin signature 94 116 7.1E-6 T 14-10-2018 IPR000895 Transthyretin/hydroxyisourate hydrolase Reactome: R-HSA-2453864|Reactome: R-HSA-2453902|Reactome: R-HSA-3000171|Reactome: R-HSA-6798695|Reactome: R-HSA-975634|Reactome: R-HSA-977225 GYO_3539 893fdb8f4fc3829eab41c068711ce32d 116 Pfam PF00576 HIUase/Transthyretin family 4 115 1.7E-32 T 14-10-2018 IPR023416 Transthyretin/hydroxyisourate hydrolase domain Reactome: R-HSA-2453864|Reactome: R-HSA-2453902|Reactome: R-HSA-3000171|Reactome: R-HSA-6798695|Reactome: R-HSA-975634|Reactome: R-HSA-977225 GYO_3539 893fdb8f4fc3829eab41c068711ce32d 116 SUPERFAMILY SSF49472 1 116 3.27E-35 T 14-10-2018 IPR036817 Transthyretin/hydroxyisourate hydrolase domain superfamily Reactome: R-HSA-2453864|Reactome: R-HSA-2453902|Reactome: R-HSA-3000171|Reactome: R-HSA-6798695|Reactome: R-HSA-975634|Reactome: R-HSA-977225 GYO_3539 893fdb8f4fc3829eab41c068711ce32d 116 ProSitePatterns PS00768 Transthyretin signature 1. 7 22 - T 14-10-2018 IPR023418 Transthyretin, thyroxine binding site Reactome: R-HSA-2453864|Reactome: R-HSA-2453902|Reactome: R-HSA-3000171|Reactome: R-HSA-6798695|Reactome: R-HSA-975634|Reactome: R-HSA-977225 GYO_3539 893fdb8f4fc3829eab41c068711ce32d 116 Gene3D G3DSA:2.60.40.180 1 116 2.9E-41 T 14-10-2018 IPR036817 Transthyretin/hydroxyisourate hydrolase domain superfamily Reactome: R-HSA-2453864|Reactome: R-HSA-2453902|Reactome: R-HSA-3000171|Reactome: R-HSA-6798695|Reactome: R-HSA-975634|Reactome: R-HSA-977225 GYO_3502 36fbd09b1bec9c8bcf0599cb7b047229 404 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 5 325 1.6E-44 T 14-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 GYO_3502 36fbd09b1bec9c8bcf0599cb7b047229 404 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 158 176 5.6E-6 T 14-10-2018 GYO_3502 36fbd09b1bec9c8bcf0599cb7b047229 404 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 6 25 5.6E-6 T 14-10-2018 GYO_3502 36fbd09b1bec9c8bcf0599cb7b047229 404 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 100 118 5.6E-6 T 14-10-2018 GYO_3502 36fbd09b1bec9c8bcf0599cb7b047229 404 SUPERFAMILY SSF51905 3 334 4.57E-29 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily GYO_3502 36fbd09b1bec9c8bcf0599cb7b047229 404 Gene3D G3DSA:3.50.50.100 1 404 5.5E-142 T 14-10-2018 GYO_2466 184467547a27aa008d081c6be0beac6e 931 Gene3D G3DSA:3.40.50.300 257 513 7.5E-38 T 14-10-2018 GYO_2466 184467547a27aa008d081c6be0beac6e 931 Gene3D G3DSA:3.40.50.300 716 926 4.4E-39 T 14-10-2018 GYO_2466 184467547a27aa008d081c6be0beac6e 931 SUPERFAMILY SSF53098 5 200 1.24E-56 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily GYO_2466 184467547a27aa008d081c6be0beac6e 931 Pfam PF04851 Type III restriction enzyme, res subunit 258 470 7.7E-7 T 14-10-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 GYO_2466 184467547a27aa008d081c6be0beac6e 931 Hamap MF_02206 3'-5' exonuclease DinG [dinG]. 2 930 26.912 T 14-10-2018 IPR006310 3'-5' exonuclease DinG GO:0005524|GO:0008408 GYO_2466 184467547a27aa008d081c6be0beac6e 931 Gene3D G3DSA:3.30.420.10 1 172 1.7E-51 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 GYO_2466 184467547a27aa008d081c6be0beac6e 931 Pfam PF13307 Helicase C-terminal domain 749 910 2.6E-36 T 14-10-2018 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 GYO_2466 184467547a27aa008d081c6be0beac6e 931 SMART SM00487 255 527 1.6E-6 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain GYO_2466 184467547a27aa008d081c6be0beac6e 931 TIGRFAM TIGR00573 dnaq: exonuclease, DNA polymerase III, epsilon subunit family 2 174 1.5E-30 T 14-10-2018 IPR006054 DNA polymerase III epsilon subunit, exonuclease domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 GYO_2466 184467547a27aa008d081c6be0beac6e 931 SUPERFAMILY SSF52540 273 892 2.8E-21 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase GYO_2466 184467547a27aa008d081c6be0beac6e 931 SMART SM00491 764 898 2.7E-51 T 14-10-2018 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 GYO_2466 184467547a27aa008d081c6be0beac6e 931 TIGRFAM TIGR01407 dinG_rel: putative DnaQ family exonuclease/DinG family helicase 5 918 1.1E-249 T 14-10-2018 IPR006310 3'-5' exonuclease DinG GO:0005524|GO:0008408 GYO_2466 184467547a27aa008d081c6be0beac6e 931 Pfam PF00929 Exonuclease 7 162 6.5E-38 T 14-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III GYO_2466 184467547a27aa008d081c6be0beac6e 931 SMART SM00479 5 172 6.1E-56 T 14-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III GYO_4164 02cf3e1985f178e9ee294b20dc700ee0 515 Gene3D G3DSA:3.40.605.10 39 502 2.3E-190 T 14-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 GYO_4164 02cf3e1985f178e9ee294b20dc700ee0 515 Pfam PF00171 Aldehyde dehydrogenase family 49 510 1.3E-160 T 14-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 GYO_4164 02cf3e1985f178e9ee294b20dc700ee0 515 TIGRFAM TIGR01237 D1pyr5carbox2: putative delta-1-pyrroline-5-carboxylate dehydrogenase 5 515 6.6E-256 T 14-10-2018 IPR005932 Putative 1-pyrroline-5-carboxylate dehydrogenase, Bacillales KEGG: 00250+1.2.1.88|KEGG: 00330+1.2.1.88|MetaCyc: PWY-6853 GYO_4164 02cf3e1985f178e9ee294b20dc700ee0 515 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 285 292 - T 14-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 GYO_4164 02cf3e1985f178e9ee294b20dc700ee0 515 Gene3D G3DSA:3.40.309.10 289 479 2.3E-190 T 14-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 GYO_4164 02cf3e1985f178e9ee294b20dc700ee0 515 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 313 324 - T 14-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 GYO_4164 02cf3e1985f178e9ee294b20dc700ee0 515 SUPERFAMILY SSF53720 4 511 3.14E-157 T 14-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 GYO_1194 852720de3417efadce8bf078766244a2 121 Pfam PF00392 Bacterial regulatory proteins, gntR family 12 74 4.0E-14 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 GYO_1194 852720de3417efadce8bf078766244a2 121 Gene3D G3DSA:1.10.10.10 7 120 4.5E-26 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily GYO_1194 852720de3417efadce8bf078766244a2 121 SMART SM00345 15 74 9.1E-23 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 GYO_1194 852720de3417efadce8bf078766244a2 121 SUPERFAMILY SSF46785 5 88 3.71E-20 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily GYO_1086 1971bbeaa7c65b144ed896f38153ecb5 449 Pfam PF11975 Family 4 glycosyl hydrolase C-terminal domain 197 417 3.1E-51 T 14-10-2018 IPR022616 Glycosyl hydrolase, family 4, C-terminal GO:0004553 GYO_1086 1971bbeaa7c65b144ed896f38153ecb5 449 SUPERFAMILY SSF51735 5 166 1.84E-55 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily GYO_1086 1971bbeaa7c65b144ed896f38153ecb5 449 ProSitePatterns PS01324 Glycosyl hydrolases family 4 signature. 140 171 - T 14-10-2018 IPR019802 Glycoside hydrolase, family 4, conserved site GO:0004553|GO:0005975 GYO_1086 1971bbeaa7c65b144ed896f38153ecb5 449 Gene3D G3DSA:3.90.110.10 169 449 3.9E-114 T 14-10-2018 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 GYO_1086 1971bbeaa7c65b144ed896f38153ecb5 449 PRINTS PR00732 Glycosyl hydrolase family 4 signature 76 92 1.3E-59 T 14-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 GYO_1086 1971bbeaa7c65b144ed896f38153ecb5 449 PRINTS PR00732 Glycosyl hydrolase family 4 signature 166 177 1.3E-59 T 14-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 GYO_1086 1971bbeaa7c65b144ed896f38153ecb5 449 PRINTS PR00732 Glycosyl hydrolase family 4 signature 97 110 1.3E-59 T 14-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 GYO_1086 1971bbeaa7c65b144ed896f38153ecb5 449 PRINTS PR00732 Glycosyl hydrolase family 4 signature 111 131 1.3E-59 T 14-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 GYO_1086 1971bbeaa7c65b144ed896f38153ecb5 449 PRINTS PR00732 Glycosyl hydrolase family 4 signature 140 157 1.3E-59 T 14-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 GYO_1086 1971bbeaa7c65b144ed896f38153ecb5 449 PRINTS PR00732 Glycosyl hydrolase family 4 signature 193 205 1.3E-59 T 14-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 GYO_1086 1971bbeaa7c65b144ed896f38153ecb5 449 PRINTS PR00732 Glycosyl hydrolase family 4 signature 7 22 1.3E-59 T 14-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 GYO_1086 1971bbeaa7c65b144ed896f38153ecb5 449 Gene3D G3DSA:3.40.50.720 3 168 4.1E-62 T 14-10-2018 GYO_1086 1971bbeaa7c65b144ed896f38153ecb5 449 Pfam PF02056 Family 4 glycosyl hydrolase 7 186 2.2E-73 T 14-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 GYO_1086 1971bbeaa7c65b144ed896f38153ecb5 449 SUPERFAMILY SSF56327 170 442 8.18E-95 T 14-10-2018 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 GYO_4194 dc9390f2661f15f4c50c8473555eae59 479 SUPERFAMILY SSF49899 340 478 2.61E-19 T 14-10-2018 IPR013320 Concanavalin A-like lectin/glucanase domain superfamily GYO_4194 dc9390f2661f15f4c50c8473555eae59 479 Pfam PF08244 Glycosyl hydrolases family 32 C terminal 391 470 1.2E-9 T 14-10-2018 IPR013189 Glycosyl hydrolase family 32, C-terminal GYO_4194 dc9390f2661f15f4c50c8473555eae59 479 SMART SM00640 33 444 7.6E-150 T 14-10-2018 IPR001362 Glycoside hydrolase, family 32 GO:0004553|GO:0005975 GYO_4194 dc9390f2661f15f4c50c8473555eae59 479 Pfam PF00251 Glycosyl hydrolases family 32 N-terminal domain 33 338 1.3E-106 T 14-10-2018 IPR013148 Glycosyl hydrolase family 32, N-terminal GYO_4194 dc9390f2661f15f4c50c8473555eae59 479 TIGRFAM TIGR01322 scrB_fam: sucrose-6-phosphate hydrolase 17 454 2.0E-193 T 14-10-2018 IPR006232 Sucrose-6-phosphate hydrolase GO:0004564|GO:0005737|GO:0005975 KEGG: 00052+3.2.1.26|KEGG: 00500+3.2.1.26 GYO_4194 dc9390f2661f15f4c50c8473555eae59 479 SUPERFAMILY SSF75005 24 338 1.88E-111 T 14-10-2018 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily GYO_4194 dc9390f2661f15f4c50c8473555eae59 479 Gene3D G3DSA:2.60.120.560 356 478 2.9E-11 T 14-10-2018 GYO_4194 dc9390f2661f15f4c50c8473555eae59 479 Gene3D G3DSA:2.115.10.20 1 355 3.9E-116 T 14-10-2018 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily GYO_4194 dc9390f2661f15f4c50c8473555eae59 479 ProSitePatterns PS00609 Glycosyl hydrolases family 32 active site. 33 46 - T 14-10-2018 IPR018053 Glycoside hydrolase, family 32, active site GO:0004553|GO:0005975 KEGG: 00052+3.2.1.26|KEGG: 00500+3.2.1.26 GYO_3603 1170f7b06e8f88408b7bc22ce3dfb315 458 PRINTS PR00834 HtrA/DegQ protease family signature 283 300 6.1E-39 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 GYO_3603 1170f7b06e8f88408b7bc22ce3dfb315 458 PRINTS PR00834 HtrA/DegQ protease family signature 305 322 6.1E-39 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 GYO_3603 1170f7b06e8f88408b7bc22ce3dfb315 458 PRINTS PR00834 HtrA/DegQ protease family signature 180 192 6.1E-39 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 GYO_3603 1170f7b06e8f88408b7bc22ce3dfb315 458 PRINTS PR00834 HtrA/DegQ protease family signature 397 409 6.1E-39 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 GYO_3603 1170f7b06e8f88408b7bc22ce3dfb315 458 PRINTS PR00834 HtrA/DegQ protease family signature 201 221 6.1E-39 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 GYO_3603 1170f7b06e8f88408b7bc22ce3dfb315 458 PRINTS PR00834 HtrA/DegQ protease family signature 242 266 6.1E-39 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 GYO_3603 1170f7b06e8f88408b7bc22ce3dfb315 458 Gene3D G3DSA:2.40.10.10 116 231 8.9E-27 T 14-10-2018 GYO_3603 1170f7b06e8f88408b7bc22ce3dfb315 458 Pfam PF13180 PDZ domain 350 449 1.3E-18 T 14-10-2018 IPR001478 PDZ domain GO:0005515 GYO_3603 1170f7b06e8f88408b7bc22ce3dfb315 458 Gene3D G3DSA:2.40.10.10 233 349 1.6E-41 T 14-10-2018 GYO_3603 1170f7b06e8f88408b7bc22ce3dfb315 458 SUPERFAMILY SSF50494 126 347 9.08E-57 T 14-10-2018 IPR009003 Peptidase S1, PA clan GYO_3603 1170f7b06e8f88408b7bc22ce3dfb315 458 Pfam PF13365 Trypsin-like peptidase domain 168 312 5.1E-31 T 14-10-2018 GYO_3603 1170f7b06e8f88408b7bc22ce3dfb315 458 SUPERFAMILY SSF50156 334 449 1.3E-22 T 14-10-2018 IPR036034 PDZ superfamily GO:0005515 GYO_3603 1170f7b06e8f88408b7bc22ce3dfb315 458 Gene3D G3DSA:2.30.42.10 350 457 1.1E-26 T 14-10-2018 GYO_3603 1170f7b06e8f88408b7bc22ce3dfb315 458 SMART SM00228 350 440 2.9E-12 T 14-10-2018 IPR001478 PDZ domain GO:0005515 GYO_0167 f62c3953d12478f883a284cf754fccb6 121 ProSitePatterns PS00646 Ribosomal protein S13 signature. 87 100 - T 14-10-2018 IPR018269 Ribosomal protein S13, conserved site GO:0003723|GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 GYO_0167 f62c3953d12478f883a284cf754fccb6 121 Gene3D G3DSA:1.10.8.50 1 71 3.0E-30 T 14-10-2018 GYO_0167 f62c3953d12478f883a284cf754fccb6 121 Pfam PF00416 Ribosomal protein S13/S18 3 108 2.0E-34 T 14-10-2018 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 GYO_0167 f62c3953d12478f883a284cf754fccb6 121 TIGRFAM TIGR03631 uS13_bact: ribosomal protein uS13 3 114 7.7E-53 T 14-10-2018 IPR019980 Ribosomal protein S13, bacterial-type GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 GYO_0167 f62c3953d12478f883a284cf754fccb6 121 SUPERFAMILY SSF46946 2 114 1.02E-45 T 14-10-2018 IPR010979 Ribosomal protein S13-like, H2TH GO:0003676 GYO_0167 f62c3953d12478f883a284cf754fccb6 121 PIRSF PIRSF002134 1 121 4.1E-42 T 14-10-2018 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 GYO_0167 f62c3953d12478f883a284cf754fccb6 121 Gene3D G3DSA:4.10.910.10 72 121 7.2E-25 T 14-10-2018 IPR027437 30s ribosomal protein S13, C-terminal Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 GYO_0167 f62c3953d12478f883a284cf754fccb6 121 Hamap MF_01315 30S ribosomal protein S13 [rpsM]. 1 118 27.978 T 14-10-2018 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 GYO_0389 0e4ce44ff2e468ef49b3b9f28eabafe7 328 SMART SM00387 244 328 0.0052 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase GYO_0389 0e4ce44ff2e468ef49b3b9f28eabafe7 328 SUPERFAMILY SSF55874 207 325 1.17E-13 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily GYO_0389 0e4ce44ff2e468ef49b3b9f28eabafe7 328 SMART SM00304 75 128 9.7E-4 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 GYO_0389 0e4ce44ff2e468ef49b3b9f28eabafe7 328 SMART SM00388 136 198 1.4E-5 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 GYO_0389 0e4ce44ff2e468ef49b3b9f28eabafe7 328 Gene3D G3DSA:1.10.287.130 72 192 4.8E-13 T 14-10-2018 GYO_0389 0e4ce44ff2e468ef49b3b9f28eabafe7 328 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 249 323 2.1E-5 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase GYO_0389 0e4ce44ff2e468ef49b3b9f28eabafe7 328 Gene3D G3DSA:3.30.565.10 206 327 1.5E-13 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily GYO_0389 0e4ce44ff2e468ef49b3b9f28eabafe7 328 SUPERFAMILY SSF47384 126 193 2.16E-6 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 GYO_0691 0292b67e3e24841303a43deea2688cbe 335 Gene3D G3DSA:1.10.1240.30 1 84 5.9E-35 T 14-10-2018 IPR017944 KaiA/RbsU helical domain superfamily GO:0006468 GYO_0691 0292b67e3e24841303a43deea2688cbe 335 SMART SM00331 119 333 1.6E-77 T 14-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 GYO_0691 0292b67e3e24841303a43deea2688cbe 335 SUPERFAMILY SSF101215 2 84 2.81E-30 T 14-10-2018 IPR017944 KaiA/RbsU helical domain superfamily GO:0006468 GYO_0691 0292b67e3e24841303a43deea2688cbe 335 Gene3D G3DSA:3.60.40.10 86 335 1.3E-56 T 14-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 GYO_0691 0292b67e3e24841303a43deea2688cbe 335 ProDom PD685490 RSBU REGULATOR SIGMA REGULATION FACTOR B PHOSPHATASE SIGMAB INDIRECT SIGMA-B 5 91 2.0E-44 T 14-10-2018 IPR014787 Phosphoserine phosphatase RsbU, N-terminal KEGG: 00260+3.1.3.3|KEGG: 00680+3.1.3.3 GYO_0691 0292b67e3e24841303a43deea2688cbe 335 Pfam PF08673 Phosphoserine phosphatase RsbU, N-terminal domain 9 83 1.7E-30 T 14-10-2018 IPR014787 Phosphoserine phosphatase RsbU, N-terminal KEGG: 00260+3.1.3.3|KEGG: 00680+3.1.3.3 GYO_0691 0292b67e3e24841303a43deea2688cbe 335 Pfam PF07228 Stage II sporulation protein E (SpoIIE) 145 333 9.1E-53 T 14-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 GYO_0691 0292b67e3e24841303a43deea2688cbe 335 SUPERFAMILY SSF81606 127 332 2.09E-9 T 14-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 GYO_2167 988600eedcca4cda160f946b67a42f8f 54 TIGRFAM TIGR02864 spore_sspO: small, acid-soluble spore protein O 7 54 1.2E-26 T 14-10-2018 IPR012613 Small acid-soluble spore protein, SspO GO:0030436|GO:0042601 GYO_2167 988600eedcca4cda160f946b67a42f8f 54 Hamap MF_00665 Small, acid-soluble spore protein O [sspO]. 7 54 20.358 T 14-10-2018 IPR012613 Small acid-soluble spore protein, SspO GO:0030436|GO:0042601 GYO_2167 988600eedcca4cda160f946b67a42f8f 54 ProDom PD050103 O SPORE SMALL ACID-SOLUBLE SASP SPORULATION CAPSID COAT K SEQUENCING 9 54 1.0E-19 T 14-10-2018 IPR012613 Small acid-soluble spore protein, SspO GO:0030436|GO:0042601 GYO_2167 988600eedcca4cda160f946b67a42f8f 54 Pfam PF08175 Small acid-soluble spore protein O family 8 54 3.5E-25 T 14-10-2018 GYO_1754 c8fc7297637dfedaed6109fa00415f11 374 Gene3D G3DSA:3.40.630.10 6 358 6.6E-121 T 14-10-2018 GYO_1754 c8fc7297637dfedaed6109fa00415f11 374 SUPERFAMILY SSF53187 3 367 1.82E-68 T 14-10-2018 GYO_1754 c8fc7297637dfedaed6109fa00415f11 374 SUPERFAMILY SSF55031 178 282 7.33E-29 T 14-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain GYO_1754 c8fc7297637dfedaed6109fa00415f11 374 Gene3D G3DSA:3.30.70.360 173 287 6.6E-121 T 14-10-2018 GYO_1754 c8fc7297637dfedaed6109fa00415f11 374 Pfam PF07687 Peptidase dimerisation domain 179 269 4.9E-12 T 14-10-2018 IPR011650 Peptidase M20, dimerisation domain GYO_1754 c8fc7297637dfedaed6109fa00415f11 374 Hamap MF_01692 N-acetyldiaminopimelate deacetylase. 3 372 62.529 T 14-10-2018 IPR023905 Acetyldiaminopimelate deacetylase GO:0009089|GO:0050118 KEGG: 00300+3.5.1.47|MetaCyc: PWY-2941 GYO_1754 c8fc7297637dfedaed6109fa00415f11 374 TIGRFAM TIGR01891 amidohydrolases: amidohydrolase 6 361 2.7E-92 T 14-10-2018 IPR017439 Amidohydrolase GO:0016787 GYO_1754 c8fc7297637dfedaed6109fa00415f11 374 PIRSF PIRSF005962 1 374 1.1E-109 T 14-10-2018 IPR017439 Amidohydrolase GO:0016787 GYO_1754 c8fc7297637dfedaed6109fa00415f11 374 Pfam PF01546 Peptidase family M20/M25/M40 66 368 1.9E-23 T 14-10-2018 IPR002933 Peptidase M20 GO:0016787 GYO_3012 ba8f533514bb35700cf05d55d6eb4065 342 Pfam PF02547 Queuosine biosynthesis protein 4 341 3.3E-142 T 14-10-2018 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 GYO_3012 ba8f533514bb35700cf05d55d6eb4065 342 Gene3D G3DSA:3.40.1780.10 14 341 3.2E-140 T 14-10-2018 GYO_3012 ba8f533514bb35700cf05d55d6eb4065 342 Gene3D G3DSA:2.40.10.240 64 162 3.2E-140 T 14-10-2018 GYO_3012 ba8f533514bb35700cf05d55d6eb4065 342 SUPERFAMILY SSF111337 1 342 4.71E-140 T 14-10-2018 IPR036100 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA superfamily GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 GYO_3012 ba8f533514bb35700cf05d55d6eb4065 342 TIGRFAM TIGR00113 queA: S-adenosylmethionine:tRNA ribosyltransferase-isomerase 1 342 2.5E-162 T 14-10-2018 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 GYO_3012 ba8f533514bb35700cf05d55d6eb4065 342 Hamap MF_00113 S-adenosylmethionine:tRNA ribosyltransferase-isomerase [queA]. 1 342 47.018 T 14-10-2018 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 GYO_2490 dffe50b73de852e457d639d70a9d1a23 267 Pfam PF00290 Tryptophan synthase alpha chain 5 254 1.9E-98 T 14-10-2018 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 GYO_2490 dffe50b73de852e457d639d70a9d1a23 267 Gene3D G3DSA:3.20.20.70 1 261 4.5E-91 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 GYO_2490 dffe50b73de852e457d639d70a9d1a23 267 TIGRFAM TIGR00262 trpA: tryptophan synthase, alpha subunit 2 259 2.2E-103 T 14-10-2018 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 GYO_2490 dffe50b73de852e457d639d70a9d1a23 267 ProSitePatterns PS00167 Tryptophan synthase alpha chain signature. 42 55 - T 14-10-2018 IPR018204 Tryptophan synthase, alpha chain, active site GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 GYO_2490 dffe50b73de852e457d639d70a9d1a23 267 Hamap MF_00131 Tryptophan synthase alpha chain [trpA]. 8 263 34.737 T 14-10-2018 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 GYO_2490 dffe50b73de852e457d639d70a9d1a23 267 SUPERFAMILY SSF51366 6 236 5.65E-78 T 14-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 GYO_1465 d502654ded6526629e71ea6d64899df8 212 SMART SM00954 46 166 3.8E-40 T 14-10-2018 IPR007685 RelA/SpoT GO:0015969 GYO_1465 d502654ded6526629e71ea6d64899df8 212 Pfam PF04607 Region found in RelA / SpoT proteins 46 164 5.8E-37 T 14-10-2018 IPR007685 RelA/SpoT GO:0015969 GYO_1465 d502654ded6526629e71ea6d64899df8 212 Gene3D G3DSA:3.30.460.10 1 148 6.3E-58 T 14-10-2018 GYO_1465 d502654ded6526629e71ea6d64899df8 212 SUPERFAMILY SSF81301 6 199 2.94E-59 T 14-10-2018 GYO_1465 d502654ded6526629e71ea6d64899df8 212 Gene3D G3DSA:1.10.287.860 149 212 1.1E-30 T 14-10-2018 GYO_1895 e2d2d8fde156fbab7acb40c81c6e4f23 303 Gene3D G3DSA:3.30.2350.10 81 303 2.2E-77 T 14-10-2018 GYO_1895 e2d2d8fde156fbab7acb40c81c6e4f23 303 Gene3D G3DSA:3.10.290.10 2 70 4.5E-21 T 14-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 GYO_1895 e2d2d8fde156fbab7acb40c81c6e4f23 303 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 134 148 - T 14-10-2018 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 GYO_1895 e2d2d8fde156fbab7acb40c81c6e4f23 303 SMART SM00363 15 72 4.3E-13 T 14-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 GYO_1895 e2d2d8fde156fbab7acb40c81c6e4f23 303 Pfam PF00849 RNA pseudouridylate synthase 88 241 5.5E-37 T 14-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 GYO_1895 e2d2d8fde156fbab7acb40c81c6e4f23 303 SUPERFAMILY SSF55174 15 101 6.39E-16 T 14-10-2018 GYO_1895 e2d2d8fde156fbab7acb40c81c6e4f23 303 TIGRFAM TIGR00005 rluA_subfam: pseudouridine synthase, RluA family 10 300 3.8E-111 T 14-10-2018 IPR006225 Pseudouridine synthase, RluC/RluD GO:0001522|GO:0003723|GO:0009451|GO:0009982 GYO_1895 e2d2d8fde156fbab7acb40c81c6e4f23 303 Pfam PF01479 S4 domain 15 61 6.0E-13 T 14-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 GYO_1895 e2d2d8fde156fbab7acb40c81c6e4f23 303 SUPERFAMILY SSF55120 73 300 2.64E-81 T 14-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 GYO_2462 8258139264fada103c22c48ca50b3639 430 Hamap MF_00534 Asparagine--tRNA ligase [asnS]. 1 430 42.079 T 14-10-2018 IPR004522 Asparagine-tRNA ligase GO:0000166|GO:0004816|GO:0005524|GO:0005737|GO:0006421 KEGG: 00970+6.1.1.22 GYO_2462 8258139264fada103c22c48ca50b3639 430 SUPERFAMILY SSF50249 9 102 5.14E-24 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold GYO_2462 8258139264fada103c22c48ca50b3639 430 SUPERFAMILY SSF55681 110 424 1.58E-98 T 14-10-2018 GYO_2462 8258139264fada103c22c48ca50b3639 430 TIGRFAM TIGR00457 asnS: asparagine--tRNA ligase 2 429 3.4E-175 T 14-10-2018 IPR004522 Asparagine-tRNA ligase GO:0000166|GO:0004816|GO:0005524|GO:0005737|GO:0006421 KEGG: 00970+6.1.1.22 GYO_2462 8258139264fada103c22c48ca50b3639 430 Gene3D G3DSA:3.30.930.10 102 430 2.9E-119 T 14-10-2018 GYO_2462 8258139264fada103c22c48ca50b3639 430 Pfam PF00152 tRNA synthetases class II (D, K and N) 111 424 1.4E-84 T 14-10-2018 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 GYO_2462 8258139264fada103c22c48ca50b3639 430 Pfam PF01336 OB-fold nucleic acid binding domain 16 95 2.6E-14 T 14-10-2018 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 GYO_2462 8258139264fada103c22c48ca50b3639 430 PRINTS PR01042 Aspartyl-tRNA synthetase signature 180 192 3.1E-15 T 14-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 GYO_2462 8258139264fada103c22c48ca50b3639 430 PRINTS PR01042 Aspartyl-tRNA synthetase signature 385 399 3.1E-15 T 14-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 GYO_2462 8258139264fada103c22c48ca50b3639 430 PRINTS PR01042 Aspartyl-tRNA synthetase signature 196 209 3.1E-15 T 14-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 GYO_2462 8258139264fada103c22c48ca50b3639 430 PRINTS PR01042 Aspartyl-tRNA synthetase signature 345 361 3.1E-15 T 14-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 GYO_2462 8258139264fada103c22c48ca50b3639 430 Gene3D G3DSA:2.40.50.140 2 101 6.2E-23 T 14-10-2018 GYO_0016 29e1aa96ef3e792cc7074353ec8206f6 196 Hamap MF_01615 Pyridoxal 5'-phosphate synthase subunit PdxT [pdxT]. 4 186 36.946 T 14-10-2018 IPR002161 Pyridoxal 5'-phosphate synthase subunit PdxT/SNO GO:0004359|GO:0042819|GO:0042823 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|KEGG: 00750+4.3.3.6|MetaCyc: PWY-6466 GYO_0016 29e1aa96ef3e792cc7074353ec8206f6 196 ProSitePatterns PS01236 PdxT/SNO family family signature. 41 51 - T 14-10-2018 IPR021196 PdxT/SNO family, conserved site KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|KEGG: 00750+4.3.3.6|MetaCyc: PWY-6466 GYO_0016 29e1aa96ef3e792cc7074353ec8206f6 196 Gene3D G3DSA:3.40.50.880 1 195 5.5E-71 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like GYO_0016 29e1aa96ef3e792cc7074353ec8206f6 196 SUPERFAMILY SSF52317 3 189 4.11E-54 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like GYO_0016 29e1aa96ef3e792cc7074353ec8206f6 196 PIRSF PIRSF005639 1 191 6.5E-73 T 14-10-2018 IPR002161 Pyridoxal 5'-phosphate synthase subunit PdxT/SNO GO:0004359|GO:0042819|GO:0042823 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|KEGG: 00750+4.3.3.6|MetaCyc: PWY-6466 GYO_0016 29e1aa96ef3e792cc7074353ec8206f6 196 Pfam PF01174 SNO glutamine amidotransferase family 6 188 1.1E-84 T 14-10-2018 IPR002161 Pyridoxal 5'-phosphate synthase subunit PdxT/SNO GO:0004359|GO:0042819|GO:0042823 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|KEGG: 00750+4.3.3.6|MetaCyc: PWY-6466 GYO_0016 29e1aa96ef3e792cc7074353ec8206f6 196 TIGRFAM TIGR03800 PLP_synth_Pdx2: pyridoxal 5'-phosphate synthase, glutaminase subunit Pdx2 4 185 9.7E-83 T 14-10-2018 IPR002161 Pyridoxal 5'-phosphate synthase subunit PdxT/SNO GO:0004359|GO:0042819|GO:0042823 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|KEGG: 00750+4.3.3.6|MetaCyc: PWY-6466 GYO_2458 46289ae80ce30e682d9b05fe1dc5708a 913 Gene3D G3DSA:2.60.40.10 707 799 2.3E-8 T 14-10-2018 IPR013783 Immunoglobulin-like fold GYO_2458 46289ae80ce30e682d9b05fe1dc5708a 913 SUPERFAMILY SSF56601 241 700 1.25E-104 T 14-10-2018 IPR012338 Beta-lactamase/transpeptidase-like GYO_2458 46289ae80ce30e682d9b05fe1dc5708a 913 Pfam PF00905 Penicillin binding protein transpeptidase domain 352 640 6.0E-56 T 14-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 GYO_2458 46289ae80ce30e682d9b05fe1dc5708a 913 SUPERFAMILY SSF53955 72 278 1.18E-73 T 14-10-2018 IPR023346 Lysozyme-like domain superfamily GYO_2458 46289ae80ce30e682d9b05fe1dc5708a 913 Gene3D G3DSA:3.40.710.10 328 653 3.6E-208 T 14-10-2018 GYO_2458 46289ae80ce30e682d9b05fe1dc5708a 913 Gene3D G3DSA:1.10.3810.10 94 286 3.6E-208 T 14-10-2018 IPR036950 Penicillin binding protein transglycosylase domain KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 GYO_2458 46289ae80ce30e682d9b05fe1dc5708a 913 TIGRFAM TIGR02074 PBP_1a_fam: penicillin-binding protein, 1A family 94 642 9.6E-174 T 14-10-2018 GYO_2458 46289ae80ce30e682d9b05fe1dc5708a 913 SUPERFAMILY SSF49265 717 787 2.6E-7 T 14-10-2018 IPR036116 Fibronectin type III superfamily GO:0005515 GYO_2458 46289ae80ce30e682d9b05fe1dc5708a 913 Gene3D G3DSA:3.90.1310.20 79 539 3.6E-208 T 14-10-2018 GYO_2458 46289ae80ce30e682d9b05fe1dc5708a 913 Pfam PF00912 Transglycosylase 84 259 8.7E-64 T 14-10-2018 IPR001264 Glycosyl transferase, family 51 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 GYO_3756 c111c9cf78fe12e79e3c8b5bf1806d65 72 SUPERFAMILY SSF158388 3 69 2.88E-36 T 14-10-2018 IPR037247 YvfG domain superfamily GYO_3756 c111c9cf78fe12e79e3c8b5bf1806d65 72 Pfam PF09628 YvfG protein 3 69 2.5E-41 T 14-10-2018 IPR018590 Uncharacterised domain YvfG GYO_2439 3f42c456509c55fba4ff4fb0c352feb9 275 Gene3D G3DSA:2.60.120.520 30 141 8.7E-113 T 14-10-2018 IPR027449 5-keto-4-deoxyuronate isomerase, N-terminal KEGG: 00040+5.3.1.17|MetaCyc: PWY-6507 GYO_2439 3f42c456509c55fba4ff4fb0c352feb9 275 Gene3D G3DSA:2.60.120.10 10 260 8.7E-113 T 14-10-2018 IPR014710 RmlC-like jelly roll fold GYO_2439 3f42c456509c55fba4ff4fb0c352feb9 275 Pfam PF04962 KduI/IolB family 30 267 6.6E-40 T 14-10-2018 IPR021120 KduI/IolB isomerase GO:0016861 KEGG: 00040+5.3.1.17|MetaCyc: PWY-6507 GYO_2439 3f42c456509c55fba4ff4fb0c352feb9 275 SUPERFAMILY SSF51182 1 259 3.83E-99 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily GYO_2439 3f42c456509c55fba4ff4fb0c352feb9 275 Hamap MF_00687 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase [kduI]. 1 275 55.502 T 14-10-2018 IPR007045 5-keto 4-deoxyuronate isomerase GO:0008697|GO:0045490 KEGG: 00040+5.3.1.17|MetaCyc: PWY-6507 GYO_2439 3f42c456509c55fba4ff4fb0c352feb9 275 PIRSF PIRSF006625 1 275 8.2E-135 T 14-10-2018 IPR007045 5-keto 4-deoxyuronate isomerase GO:0008697|GO:0045490 KEGG: 00040+5.3.1.17|MetaCyc: PWY-6507 GYO_3180 e72c363ddded73fcc2b8b02c214fc34e 313 Gene3D G3DSA:3.90.1640.10 1 197 1.5E-58 T 14-10-2018 GYO_3180 e72c363ddded73fcc2b8b02c214fc34e 313 Pfam PF01368 DHH family 15 153 3.0E-12 T 14-10-2018 IPR001667 DDH domain KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 GYO_3180 e72c363ddded73fcc2b8b02c214fc34e 313 SUPERFAMILY SSF64182 12 299 6.28E-72 T 14-10-2018 IPR038763 DHH phosphoesterase superfamily GYO_3180 e72c363ddded73fcc2b8b02c214fc34e 313 Gene3D G3DSA:3.10.310.30 199 313 1.2E-35 T 14-10-2018 GYO_3180 e72c363ddded73fcc2b8b02c214fc34e 313 Pfam PF02272 DHHA1 domain 179 306 3.4E-16 T 14-10-2018 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7|Reactome: R-HSA-379716 GYO_0428 96a60a9b667a19e291ea687eb7f2e340 263 TIGRFAM TIGR00163 PS_decarb: phosphatidylserine decarboxylase 50 262 5.4E-79 T 14-10-2018 IPR033177 Phosphatidylserine decarboxylase GO:0004609|GO:0008654 KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669|Reactome: R-HSA-1483213 GYO_0428 96a60a9b667a19e291ea687eb7f2e340 263 Pfam PF02666 Phosphatidylserine decarboxylase 64 261 2.0E-57 T 14-10-2018 IPR003817 Phosphatidylserine decarboxylase-related GO:0004609|GO:0008654 KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669|Reactome: R-HSA-1483213 GYO_0428 96a60a9b667a19e291ea687eb7f2e340 263 Hamap MF_00662 Phosphatidylserine decarboxylase proenzyme [psd]. 11 263 37.466 T 14-10-2018 IPR033178 Phosphatidylserine decarboxylase, prokaryotic type 1 GO:0004609|GO:0008654 KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669 GYO_1796 b4b0af9b8084abcd6da34a30ae281a5b 223 SUPERFAMILY SSF140423 26 216 7.32E-55 T 14-10-2018 IPR036785 YkyA-like superfamily GYO_1796 b4b0af9b8084abcd6da34a30ae281a5b 223 Pfam PF10368 Putative cell-wall binding lipoprotein 17 217 1.8E-68 T 14-10-2018 IPR019454 Putative cell-wall binding lipoprotein YkyA-like GYO_1796 b4b0af9b8084abcd6da34a30ae281a5b 223 Gene3D G3DSA:1.20.120.570 23 214 4.1E-45 T 14-10-2018 IPR036785 YkyA-like superfamily GYO_4507 84c2bc3e79c53fe09c2b2c39d8f272fd 667 Gene3D G3DSA:2.40.40.20 537 667 1.3E-21 T 14-10-2018 GYO_4507 84c2bc3e79c53fe09c2b2c39d8f272fd 667 Pfam PF00384 Molybdopterin oxidoreductase 60 461 1.5E-58 T 14-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 GYO_4507 84c2bc3e79c53fe09c2b2c39d8f272fd 667 Gene3D G3DSA:2.20.25.90 1 62 3.6E-14 T 14-10-2018 GYO_4507 84c2bc3e79c53fe09c2b2c39d8f272fd 667 Gene3D G3DSA:3.40.50.740 68 465 2.5E-132 T 14-10-2018 GYO_4507 84c2bc3e79c53fe09c2b2c39d8f272fd 667 Gene3D G3DSA:3.40.228.10 133 526 2.5E-132 T 14-10-2018 GYO_4507 84c2bc3e79c53fe09c2b2c39d8f272fd 667 SMART SM00926 2 57 6.5E-18 T 14-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 GYO_4507 84c2bc3e79c53fe09c2b2c39d8f272fd 667 Gene3D G3DSA:3.30.2070.10 419 504 2.5E-132 T 14-10-2018 GYO_4507 84c2bc3e79c53fe09c2b2c39d8f272fd 667 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 3 55 6.5E-17 T 14-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 GYO_4507 84c2bc3e79c53fe09c2b2c39d8f272fd 667 Pfam PF01568 Molydopterin dinucleotide binding domain 561 649 1.9E-11 T 14-10-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0043546|GO:0055114 GYO_4507 84c2bc3e79c53fe09c2b2c39d8f272fd 667 SUPERFAMILY SSF53706 3 547 5.89E-148 T 14-10-2018 GYO_4507 84c2bc3e79c53fe09c2b2c39d8f272fd 667 SUPERFAMILY SSF50692 512 667 1.2E-23 T 14-10-2018 IPR009010 Aspartate decarboxylase-like domain superfamily GYO_1347 5c2599532224ac23172722d592eeac40 89 SMART SM00894 33 88 7.6E-4 T 14-10-2018 IPR008613 Excalibur calcium-binding domain GYO_1347 5c2599532224ac23172722d592eeac40 89 Pfam PF05901 Excalibur calcium-binding domain 34 88 9.0E-13 T 14-10-2018 IPR008613 Excalibur calcium-binding domain GYO_3714 3d79c9b816117eea27793cb78150ee7d 511 Pfam PF01676 Metalloenzyme superfamily 4 499 3.0E-79 T 14-10-2018 IPR006124 Metalloenzyme GO:0003824|GO:0046872 GYO_3714 3d79c9b816117eea27793cb78150ee7d 511 Pfam PF06415 BPG-independent PGAM N-terminus (iPGM_N) 82 299 1.6E-86 T 14-10-2018 IPR011258 BPG-independent PGAM, N-terminal GO:0004619|GO:0005737|GO:0006007|GO:0030145 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 GYO_3714 3d79c9b816117eea27793cb78150ee7d 511 TIGRFAM TIGR01307 pgm_bpd_ind: phosphoglycerate mutase (2,3-diphosphoglycerate-independent) 5 509 1.3E-213 T 14-10-2018 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent GO:0004619|GO:0006007 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 GYO_3714 3d79c9b816117eea27793cb78150ee7d 511 Gene3D G3DSA:3.40.1450.10 77 312 2.5E-235 T 14-10-2018 IPR036646 BPG-independent phosphoglycerate mutase, domain B superfamily GO:0004619|GO:0005737 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 GYO_3714 3d79c9b816117eea27793cb78150ee7d 511 Gene3D G3DSA:3.40.720.10 5 509 2.5E-235 T 14-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 GYO_3714 3d79c9b816117eea27793cb78150ee7d 511 PIRSF PIRSF001492 1 511 1.0E-208 T 14-10-2018 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent GO:0004619|GO:0006007 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 GYO_3714 3d79c9b816117eea27793cb78150ee7d 511 SUPERFAMILY SSF53649 4 509 8.04E-76 T 14-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 GYO_3714 3d79c9b816117eea27793cb78150ee7d 511 SUPERFAMILY SSF64158 77 310 2.48E-94 T 14-10-2018 IPR036646 BPG-independent phosphoglycerate mutase, domain B superfamily GO:0004619|GO:0005737 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 GYO_3714 3d79c9b816117eea27793cb78150ee7d 511 Hamap MF_01038 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [gpmI]. 4 510 50.811 T 14-10-2018 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent GO:0004619|GO:0006007 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 GYO_4266 ac1ee73467d8ab63db55ce9bb4f3fc16 258 Pfam PF12679 ABC-2 family transporter protein 6 206 2.7E-7 T 14-10-2018 IPR032688 ABC-2 family transporter protein GO:0055085 GYO_0140 f9f58796a61c61a3c0e2a3291f9713b0 396 PRINTS PR00315 GTP-binding elongation factor signature 79 89 3.1E-25 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 GYO_0140 f9f58796a61c61a3c0e2a3291f9713b0 396 PRINTS PR00315 GTP-binding elongation factor signature 14 27 3.1E-25 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 GYO_0140 f9f58796a61c61a3c0e2a3291f9713b0 396 PRINTS PR00315 GTP-binding elongation factor signature 59 67 3.1E-25 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 GYO_0140 f9f58796a61c61a3c0e2a3291f9713b0 396 PRINTS PR00315 GTP-binding elongation factor signature 132 141 3.1E-25 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 GYO_0140 f9f58796a61c61a3c0e2a3291f9713b0 396 PRINTS PR00315 GTP-binding elongation factor signature 95 106 3.1E-25 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 GYO_0140 f9f58796a61c61a3c0e2a3291f9713b0 396 SUPERFAMILY SSF50447 204 303 5.89E-33 T 14-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily GYO_0140 f9f58796a61c61a3c0e2a3291f9713b0 396 Pfam PF00009 Elongation factor Tu GTP binding domain 10 202 1.3E-61 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 GYO_0140 f9f58796a61c61a3c0e2a3291f9713b0 396 Pfam PF03144 Elongation factor Tu domain 2 226 295 3.3E-19 T 14-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 GYO_0140 f9f58796a61c61a3c0e2a3291f9713b0 396 Gene3D G3DSA:2.40.30.10 340 394 3.0E-26 T 14-10-2018 GYO_0140 f9f58796a61c61a3c0e2a3291f9713b0 396 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 52 67 - T 14-10-2018 IPR031157 Tr-type G domain, conserved site GYO_0140 f9f58796a61c61a3c0e2a3291f9713b0 396 Gene3D G3DSA:2.40.30.10 207 336 2.7E-55 T 14-10-2018 GYO_0140 f9f58796a61c61a3c0e2a3291f9713b0 396 SUPERFAMILY SSF50465 304 396 2.19E-35 T 14-10-2018 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal GYO_0140 f9f58796a61c61a3c0e2a3291f9713b0 396 SUPERFAMILY SSF52540 6 220 2.58E-65 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase GYO_0140 f9f58796a61c61a3c0e2a3291f9713b0 396 Gene3D G3DSA:3.40.50.300 1 204 1.6E-70 T 14-10-2018 GYO_0140 f9f58796a61c61a3c0e2a3291f9713b0 396 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 12 147 4.2E-16 T 14-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 GYO_0140 f9f58796a61c61a3c0e2a3291f9713b0 396 Pfam PF03143 Elongation factor Tu C-terminal domain 300 394 9.1E-33 T 14-10-2018 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal GYO_0140 f9f58796a61c61a3c0e2a3291f9713b0 396 Hamap MF_00118_B Elongation factor Tu [tuf]. 1 396 60.281 T 14-10-2018 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 GYO_0140 f9f58796a61c61a3c0e2a3291f9713b0 396 TIGRFAM TIGR00485 EF-Tu: translation elongation factor Tu 1 395 2.0E-234 T 14-10-2018 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 GYO_1666 d00d0baa4bc7d66d2442681337275079 728 Gene3D G3DSA:3.30.70.270 298 474 2.3E-55 T 14-10-2018 GYO_1666 d00d0baa4bc7d66d2442681337275079 728 Pfam PF00563 EAL domain 480 712 1.5E-71 T 14-10-2018 IPR001633 EAL domain GYO_1666 d00d0baa4bc7d66d2442681337275079 728 SUPERFAMILY SSF55073 305 463 1.49E-44 T 14-10-2018 IPR029787 Nucleotide cyclase GYO_1666 d00d0baa4bc7d66d2442681337275079 728 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 297 461 3.7E-37 T 14-10-2018 IPR000160 GGDEF domain GYO_1666 d00d0baa4bc7d66d2442681337275079 728 SUPERFAMILY SSF141868 480 724 6.15E-90 T 14-10-2018 IPR035919 EAL domain superfamily GYO_1666 d00d0baa4bc7d66d2442681337275079 728 Pfam PF00990 Diguanylate cyclase, GGDEF domain 300 457 2.1E-48 T 14-10-2018 IPR000160 GGDEF domain GYO_1666 d00d0baa4bc7d66d2442681337275079 728 Gene3D G3DSA:3.30.450.20 170 297 2.8E-9 T 14-10-2018 GYO_1666 d00d0baa4bc7d66d2442681337275079 728 Pfam PF03707 Bacterial signalling protein N terminal repeat 44 89 6.8E-9 T 14-10-2018 IPR005330 MHYT domain GYO_1666 d00d0baa4bc7d66d2442681337275079 728 Pfam PF03707 Bacterial signalling protein N terminal repeat 112 168 8.2E-9 T 14-10-2018 IPR005330 MHYT domain GYO_1666 d00d0baa4bc7d66d2442681337275079 728 SUPERFAMILY SSF55785 174 287 2.55E-5 T 14-10-2018 IPR035965 PAS domain superfamily GYO_1666 d00d0baa4bc7d66d2442681337275079 728 Gene3D G3DSA:3.20.20.450 475 727 1.2E-96 T 14-10-2018 IPR035919 EAL domain superfamily GYO_1666 d00d0baa4bc7d66d2442681337275079 728 SMART SM00052 472 717 1.9E-129 T 14-10-2018 IPR001633 EAL domain GYO_1666 d00d0baa4bc7d66d2442681337275079 728 SMART SM00267 289 462 8.6E-66 T 14-10-2018 IPR000160 GGDEF domain GYO_2681 2f7e0be647f96b1fefe5b03dbadd215e 426 SUPERFAMILY SSF50494 347 411 1.39E-6 T 14-10-2018 IPR009003 Peptidase S1, PA clan GYO_2681 2f7e0be647f96b1fefe5b03dbadd215e 426 TIGRFAM TIGR02860 spore_IV_B: stage IV sporulation protein B 3 417 9.3E-182 T 14-10-2018 IPR014219 Peptidase S55, sporulation stage IV, protein B GYO_2681 2f7e0be647f96b1fefe5b03dbadd215e 426 Pfam PF00595 PDZ domain (Also known as DHR or GLGF) 107 183 1.3E-9 T 14-10-2018 IPR001478 PDZ domain GO:0005515 GYO_2681 2f7e0be647f96b1fefe5b03dbadd215e 426 Pfam PF05580 SpoIVB peptidase S55 204 412 7.1E-88 T 14-10-2018 IPR008763 Peptidase S55, SpoIVB GYO_2681 2f7e0be647f96b1fefe5b03dbadd215e 426 Gene3D G3DSA:2.30.42.10 134 213 8.9E-17 T 14-10-2018 GYO_2681 2f7e0be647f96b1fefe5b03dbadd215e 426 SUPERFAMILY SSF50156 136 197 9.86E-11 T 14-10-2018 IPR036034 PDZ superfamily GO:0005515 GYO_2681 2f7e0be647f96b1fefe5b03dbadd215e 426 SMART SM00228 111 187 2.0E-6 T 14-10-2018 IPR001478 PDZ domain GO:0005515 GYO_1922 f0443f707fecf22f01209474af6d303c 160 Gene3D G3DSA:3.90.45.10 1 156 3.0E-60 T 14-10-2018 IPR036821 Peptide deformylase superfamily GYO_1922 f0443f707fecf22f01209474af6d303c 160 PIRSF PIRSF004749 1 159 1.1E-48 T 14-10-2018 IPR023635 Peptide deformylase GYO_1922 f0443f707fecf22f01209474af6d303c 160 TIGRFAM TIGR00079 pept_deformyl: peptide deformylase 4 158 1.4E-59 T 14-10-2018 IPR023635 Peptide deformylase GYO_1922 f0443f707fecf22f01209474af6d303c 160 Hamap MF_00163 Peptide deformylase [def]. 2 158 30.088 T 14-10-2018 IPR023635 Peptide deformylase GYO_1922 f0443f707fecf22f01209474af6d303c 160 SUPERFAMILY SSF56420 2 151 5.63E-56 T 14-10-2018 IPR036821 Peptide deformylase superfamily GYO_1922 f0443f707fecf22f01209474af6d303c 160 Pfam PF01327 Polypeptide deformylase 3 148 2.6E-49 T 14-10-2018 IPR023635 Peptide deformylase GYO_1922 f0443f707fecf22f01209474af6d303c 160 PRINTS PR01576 Peptide deformylase signature 119 148 2.2E-36 T 14-10-2018 IPR023635 Peptide deformylase GYO_1922 f0443f707fecf22f01209474af6d303c 160 PRINTS PR01576 Peptide deformylase signature 100 118 2.2E-36 T 14-10-2018 IPR023635 Peptide deformylase GYO_1922 f0443f707fecf22f01209474af6d303c 160 PRINTS PR01576 Peptide deformylase signature 88 99 2.2E-36 T 14-10-2018 IPR023635 Peptide deformylase GYO_1922 f0443f707fecf22f01209474af6d303c 160 PRINTS PR01576 Peptide deformylase signature 33 62 2.2E-36 T 14-10-2018 IPR023635 Peptide deformylase GYO_2591 e003c8852d33626c04e46317791d69b4 439 SMART SM00919 236 435 2.9E-35 T 14-10-2018 IPR012302 Malic enzyme, NAD-binding GO:0051287 GYO_2591 e003c8852d33626c04e46317791d69b4 439 PIRSF PIRSF000106 1 438 2.0E-83 T 14-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 GYO_2591 e003c8852d33626c04e46317791d69b4 439 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 253 323 2.5E-6 T 14-10-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 GYO_2591 e003c8852d33626c04e46317791d69b4 439 SMART SM01274 91 224 7.1E-68 T 14-10-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 GYO_2591 e003c8852d33626c04e46317791d69b4 439 ProSitePatterns PS00331 Malic enzymes signature. 232 248 - T 14-10-2018 IPR015884 Malic enzyme, conserved site GO:0004471|GO:0055114 GYO_2591 e003c8852d33626c04e46317791d69b4 439 Pfam PF03949 Malic enzyme, NAD binding domain 371 414 8.3E-6 T 14-10-2018 IPR012302 Malic enzyme, NAD-binding GO:0051287 GYO_2591 e003c8852d33626c04e46317791d69b4 439 SUPERFAMILY SSF53223 85 234 3.88E-49 T 14-10-2018 GYO_2591 e003c8852d33626c04e46317791d69b4 439 SUPERFAMILY SSF51735 236 435 2.31E-38 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily GYO_2591 e003c8852d33626c04e46317791d69b4 439 Gene3D G3DSA:3.40.50.720 234 438 1.6E-44 T 14-10-2018 GYO_2591 e003c8852d33626c04e46317791d69b4 439 Gene3D G3DSA:3.40.50.10380 71 233 4.1E-63 T 14-10-2018 IPR037062 Malic enzyme, N-terminal domain superfamily GO:0004471|GO:0055114 GYO_2591 e003c8852d33626c04e46317791d69b4 439 Pfam PF00390 Malic enzyme, N-terminal domain 97 224 3.7E-26 T 14-10-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 GYO_3935 134bb19c6149795be0feaeb229e06032 389 SUPERFAMILY SSF53756 45 384 1.99E-15 T 14-10-2018 GYO_3935 134bb19c6149795be0feaeb229e06032 389 Gene3D G3DSA:3.40.50.12580 193 368 8.5E-75 T 14-10-2018 GYO_3935 134bb19c6149795be0feaeb229e06032 389 Pfam PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase 20 380 2.3E-83 T 14-10-2018 IPR007554 CDP-glycerol glycerophosphotransferase GO:0016020|GO:0047355 GYO_3935 134bb19c6149795be0feaeb229e06032 389 Gene3D G3DSA:3.40.50.11820 25 375 8.5E-75 T 14-10-2018 GYO_1823 df1b803e30da02d19a9e3ea41adc4efe 442 Gene3D G3DSA:3.40.50.1010 2 149 5.7E-22 T 14-10-2018 GYO_1823 df1b803e30da02d19a9e3ea41adc4efe 442 SMART SM00670 3 135 1.3E-28 T 14-10-2018 IPR002716 PIN domain GYO_1823 df1b803e30da02d19a9e3ea41adc4efe 442 Pfam PF02562 PhoH-like protein 233 426 4.9E-53 T 14-10-2018 IPR003714 PhoH-like protein GO:0005524 GYO_1823 df1b803e30da02d19a9e3ea41adc4efe 442 SUPERFAMILY SSF88723 4 149 3.36E-11 T 14-10-2018 IPR029060 PIN-like domain superfamily GYO_1823 df1b803e30da02d19a9e3ea41adc4efe 442 Gene3D G3DSA:3.40.50.300 231 441 1.8E-69 T 14-10-2018 GYO_1823 df1b803e30da02d19a9e3ea41adc4efe 442 SUPERFAMILY SSF52540 232 421 6.92E-28 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase GYO_1823 df1b803e30da02d19a9e3ea41adc4efe 442 Pfam PF13638 PIN domain 5 147 2.3E-34 T 14-10-2018 IPR002716 PIN domain GYO_2223 b7117ca5d966e15ef306faad245cb6d0 238 PIRSF PIRSF000126 1 237 1.0E-63 T 14-10-2018 GYO_2223 b7117ca5d966e15ef306faad245cb6d0 238 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 142 170 - T 14-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 GYO_2223 b7117ca5d966e15ef306faad245cb6d0 238 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 7 192 0.0015 T 14-10-2018 GYO_2223 b7117ca5d966e15ef306faad245cb6d0 238 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 176 193 9.2E-32 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR GYO_2223 b7117ca5d966e15ef306faad245cb6d0 238 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 155 174 9.2E-32 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR GYO_2223 b7117ca5d966e15ef306faad245cb6d0 238 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 82 93 9.2E-32 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR GYO_2223 b7117ca5d966e15ef306faad245cb6d0 238 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 129 145 9.2E-32 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR GYO_2223 b7117ca5d966e15ef306faad245cb6d0 238 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 9.2E-32 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR GYO_2223 b7117ca5d966e15ef306faad245cb6d0 238 Gene3D G3DSA:3.40.50.720 1 236 6.4E-74 T 14-10-2018 GYO_2223 b7117ca5d966e15ef306faad245cb6d0 238 SUPERFAMILY SSF51735 3 224 1.26E-72 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily GYO_2223 b7117ca5d966e15ef306faad245cb6d0 238 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 135 143 9.8E-14 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR GYO_2223 b7117ca5d966e15ef306faad245cb6d0 238 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 155 174 9.8E-14 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR GYO_2223 b7117ca5d966e15ef306faad245cb6d0 238 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 82 93 9.8E-14 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR GYO_2223 b7117ca5d966e15ef306faad245cb6d0 238 Pfam PF00106 short chain dehydrogenase 7 197 3.0E-66 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR GYO_1665 a5db09370673f71ee3ab4b8d19f5ccd7 294 SUPERFAMILY SSF100939 2 259 1.55E-56 T 14-10-2018 IPR016194 SPOC-like, C-terminal domain superfamily GYO_1665 a5db09370673f71ee3ab4b8d19f5ccd7 294 Gene3D G3DSA:2.40.290.10 2 175 1.3E-20 T 14-10-2018 IPR016194 SPOC-like, C-terminal domain superfamily GYO_1665 a5db09370673f71ee3ab4b8d19f5ccd7 294 Hamap MF_01875 Non-homologous end joining protein Ku [ku]. 1 255 32.733 T 14-10-2018 IPR009187 Non-homologous end joining protein Ku, prokaryotic type GYO_1665 a5db09370673f71ee3ab4b8d19f5ccd7 294 TIGRFAM TIGR02772 Ku_bact: Ku protein 1 257 1.9E-100 T 14-10-2018 IPR009187 Non-homologous end joining protein Ku, prokaryotic type GYO_1665 a5db09370673f71ee3ab4b8d19f5ccd7 294 SMART SM00559 52 181 4.0E-54 T 14-10-2018 IPR006164 Ku70/Ku80 beta-barrel domain GO:0003677|GO:0006303 Reactome: R-HSA-164843|Reactome: R-HSA-1834949|Reactome: R-HSA-3270619|Reactome: R-HSA-5693571|Reactome: R-HSA-6798695 GYO_1665 a5db09370673f71ee3ab4b8d19f5ccd7 294 Pfam PF02735 Ku70/Ku80 beta-barrel domain 11 190 2.7E-42 T 14-10-2018 IPR006164 Ku70/Ku80 beta-barrel domain GO:0003677|GO:0006303 Reactome: R-HSA-164843|Reactome: R-HSA-1834949|Reactome: R-HSA-3270619|Reactome: R-HSA-5693571|Reactome: R-HSA-6798695 GYO_1665 a5db09370673f71ee3ab4b8d19f5ccd7 294 PIRSF PIRSF006493 1 291 1.4E-112 T 14-10-2018 IPR009187 Non-homologous end joining protein Ku, prokaryotic type GYO_1331 b905c1c5ee4d83896a1ec6a340b3af05 149 SUPERFAMILY SSF55729 1 144 3.88E-35 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase GYO_1331 b905c1c5ee4d83896a1ec6a340b3af05 149 Gene3D G3DSA:3.40.630.30 2 139 1.5E-38 T 14-10-2018 GYO_1331 b905c1c5ee4d83896a1ec6a340b3af05 149 Pfam PF00583 Acetyltransferase (GNAT) family 30 133 2.3E-16 T 14-10-2018 IPR000182 GNAT domain GYO_2954 9c40854a06caa2a35bf7e6c25a5e4908 156 Pfam PF16295 Tetracycline repressor, C-terminal all-alpha domain 21 151 5.5E-60 T 14-10-2018 IPR032551 HTH-type transcriptional repressor, C-terminal GYO_2954 9c40854a06caa2a35bf7e6c25a5e4908 156 SUPERFAMILY SSF46689 1 37 3.39E-5 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 GYO_2954 9c40854a06caa2a35bf7e6c25a5e4908 156 Gene3D G3DSA:1.10.357.10 1 152 6.4E-34 T 14-10-2018 GYO_2954 9c40854a06caa2a35bf7e6c25a5e4908 156 SUPERFAMILY SSF48498 42 134 2.67E-5 T 14-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily GYO_3623 63cba70587a3979586dd6f9aeed87b4d 441 SUPERFAMILY SSF52540 2 217 6.43E-58 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase GYO_3623 63cba70587a3979586dd6f9aeed87b4d 441 SMART SM00382 26 216 1.8E-12 T 14-10-2018 IPR003593 AAA+ ATPase domain GYO_3623 63cba70587a3979586dd6f9aeed87b4d 441 Gene3D G3DSA:3.40.50.300 1 254 7.8E-65 T 14-10-2018 GYO_3623 63cba70587a3979586dd6f9aeed87b4d 441 Pfam PF00005 ABC transporter 18 167 2.0E-32 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 GYO_2609 e44c5f0b39af304c1eaeb224ca0ba06c 156 Gene3D G3DSA:3.40.630.30 1 156 1.9E-45 T 14-10-2018 GYO_2609 e44c5f0b39af304c1eaeb224ca0ba06c 156 SUPERFAMILY SSF55729 1 155 1.69E-23 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase GYO_2609 e44c5f0b39af304c1eaeb224ca0ba06c 156 PIRSF PIRSF037663 1 156 8.4E-78 T 14-10-2018 IPR017255 Acetyltransferase, GNAT, predicted GYO_2609 e44c5f0b39af304c1eaeb224ca0ba06c 156 Pfam PF00583 Acetyltransferase (GNAT) family 31 124 2.6E-16 T 14-10-2018 IPR000182 GNAT domain GYO_0201 b02ef8363dcc7449c7d337b8931ddd0b 93 Pfam PF11417 Loader and inhibitor of phage G40P 3 66 4.0E-7 T 14-10-2018 IPR024424 Replicative helicase inhibitor G39P, N-terminal GYO_0201 b02ef8363dcc7449c7d337b8931ddd0b 93 Gene3D G3DSA:1.10.8.200 2 67 7.0E-9 T 14-10-2018 GYO_0280 b02ef8363dcc7449c7d337b8931ddd0b 93 Pfam PF11417 Loader and inhibitor of phage G40P 3 66 4.0E-7 T 14-10-2018 IPR024424 Replicative helicase inhibitor G39P, N-terminal GYO_0280 b02ef8363dcc7449c7d337b8931ddd0b 93 Gene3D G3DSA:1.10.8.200 2 67 7.0E-9 T 14-10-2018 GYO_2832 f0d34c062335e55c4cbeb3eab55ea115 118 Hamap MF_01477 Ribosomal silencing factor RsfS [rsfS]. 2 105 25.592 T 14-10-2018 IPR004394 Protein Iojap/ribosomal silencing factor RsfS GYO_2832 f0d34c062335e55c4cbeb3eab55ea115 118 Gene3D G3DSA:3.30.460.10 1 108 2.3E-40 T 14-10-2018 GYO_2832 f0d34c062335e55c4cbeb3eab55ea115 118 TIGRFAM TIGR00090 rsfS_iojap_ybeB: ribosome silencing factor 7 104 1.5E-37 T 14-10-2018 IPR004394 Protein Iojap/ribosomal silencing factor RsfS GYO_2832 f0d34c062335e55c4cbeb3eab55ea115 118 Pfam PF02410 Ribosomal silencing factor during starvation 11 104 1.1E-27 T 14-10-2018 GYO_2832 f0d34c062335e55c4cbeb3eab55ea115 118 SUPERFAMILY SSF81301 1 114 2.78E-41 T 14-10-2018 GYO_4487 9c42ce85435c1560a10a5a89d88e0151 220 SMART SM00849 24 200 4.8E-30 T 14-10-2018 IPR001279 Metallo-beta-lactamase GYO_4487 9c42ce85435c1560a10a5a89d88e0151 220 SUPERFAMILY SSF56281 4 214 5.77E-38 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like GYO_4487 9c42ce85435c1560a10a5a89d88e0151 220 Gene3D G3DSA:3.60.15.10 2 218 3.0E-34 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like GYO_4487 9c42ce85435c1560a10a5a89d88e0151 220 Pfam PF00753 Metallo-beta-lactamase superfamily 24 170 1.6E-27 T 14-10-2018 IPR001279 Metallo-beta-lactamase GYO_2913 4eec18a4979ed7368679690507646374 281 SUPERFAMILY SSF55136 126 278 7.06E-40 T 14-10-2018 IPR011256 Regulatory factor, effector binding domain superfamily GYO_2913 4eec18a4979ed7368679690507646374 281 Gene3D G3DSA:3.20.80.10 127 280 5.9E-51 T 14-10-2018 IPR011256 Regulatory factor, effector binding domain superfamily GYO_2913 4eec18a4979ed7368679690507646374 281 SUPERFAMILY SSF46955 3 110 3.66E-24 T 14-10-2018 IPR009061 Putative DNA-binding domain superfamily GYO_2913 4eec18a4979ed7368679690507646374 281 Gene3D G3DSA:1.10.1660.10 3 126 8.1E-22 T 14-10-2018 GYO_2913 4eec18a4979ed7368679690507646374 281 Pfam PF13411 MerR HTH family regulatory protein 5 70 7.2E-11 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 GYO_2913 4eec18a4979ed7368679690507646374 281 SMART SM00422 5 75 3.1E-10 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 GYO_0760 98c5bc6d4ba17cf11bcb2d1193df7011 115 Gene3D G3DSA:1.10.10.10 4 97 2.4E-26 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily GYO_0760 98c5bc6d4ba17cf11bcb2d1193df7011 115 SUPERFAMILY SSF46785 11 84 8.09E-24 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily GYO_0760 98c5bc6d4ba17cf11bcb2d1193df7011 115 SMART SM00418 14 93 7.9E-30 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 GYO_0760 98c5bc6d4ba17cf11bcb2d1193df7011 115 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 35 46 1.7E-19 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 GYO_0760 98c5bc6d4ba17cf11bcb2d1193df7011 115 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 48 63 1.7E-19 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 GYO_0760 98c5bc6d4ba17cf11bcb2d1193df7011 115 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 16 31 1.7E-19 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 GYO_0760 98c5bc6d4ba17cf11bcb2d1193df7011 115 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 63 78 1.7E-19 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 GYO_0760 98c5bc6d4ba17cf11bcb2d1193df7011 115 Pfam PF01022 Bacterial regulatory protein, arsR family 21 66 1.8E-19 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 GYO_1790 c63423a20f0cfe4955ed45433e1570f7 69 Gene3D G3DSA:3.10.20.730 1 58 4.5E-27 T 14-10-2018 GYO_1790 c63423a20f0cfe4955ed45433e1570f7 69 ProDom PD055417 UPF0356 TRANSCRIPTIONAL REGULATOR SP0122 SH1862 BLI01669/BL01628 MW0973 LMOF2365_1049 BCE33L3734 SPYM3_1619/SPS0248 1 68 2.0E-32 T 14-10-2018 IPR009907 Protein of unknown function DUF1447 GYO_1790 c63423a20f0cfe4955ed45433e1570f7 69 Hamap MF_01553 UPF0356 protein . 1 69 22.298 T 14-10-2018 IPR009907 Protein of unknown function DUF1447 GYO_1790 c63423a20f0cfe4955ed45433e1570f7 69 Pfam PF07288 Protein of unknown function (DUF1447) 2 68 5.5E-30 T 14-10-2018 IPR009907 Protein of unknown function DUF1447 GYO_2712 bc899cdb36f277248d1aff25bd959d1f 142 Gene3D G3DSA:1.10.60.10 74 142 4.4E-36 T 14-10-2018 IPR036421 Iron dependent repressor, metal binding and dimerisation domain superfamily GO:0046914|GO:0046983 GYO_2712 bc899cdb36f277248d1aff25bd959d1f 142 Hamap MF_00732 Transcriptional regulator MntR [mntR]. 1 139 44.968 T 14-10-2018 IPR022897 HTH-type transcription regulator MntR GYO_2712 bc899cdb36f277248d1aff25bd959d1f 142 Gene3D G3DSA:1.10.10.10 1 73 3.0E-26 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily GYO_2712 bc899cdb36f277248d1aff25bd959d1f 142 Pfam PF01325 Iron dependent repressor, N-terminal DNA binding domain 1 60 8.0E-27 T 14-10-2018 IPR022687 DTXR-type HTH domain GO:0003677 GYO_2712 bc899cdb36f277248d1aff25bd959d1f 142 Pfam PF02742 Iron dependent repressor, metal binding and dimerisation domain 63 125 6.3E-19 T 14-10-2018 IPR001367 Iron dependent repressor, metal binding and dimerisation domain GO:0046914|GO:0046983 GYO_2712 bc899cdb36f277248d1aff25bd959d1f 142 SUPERFAMILY SSF47979 63 132 2.47E-19 T 14-10-2018 IPR036421 Iron dependent repressor, metal binding and dimerisation domain superfamily GO:0046914|GO:0046983 GYO_2712 bc899cdb36f277248d1aff25bd959d1f 142 SMART SM00529 24 123 1.7E-46 T 14-10-2018 IPR022689 Iron dependent repressor GO:0003700|GO:0006355|GO:0046914 GYO_2712 bc899cdb36f277248d1aff25bd959d1f 142 SUPERFAMILY SSF46785 3 62 2.93E-17 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily GYO_4197 c0503b44cd982af92ac3edc9ce421780 276 Pfam PF03123 CAT RNA binding domain 2 55 1.8E-19 T 14-10-2018 IPR004341 CAT RNA-binding domain GO:0003723 GYO_4197 c0503b44cd982af92ac3edc9ce421780 276 SUPERFAMILY SSF63520 169 272 4.97E-30 T 14-10-2018 IPR036634 PRD domain superfamily GO:0006355 GYO_4197 c0503b44cd982af92ac3edc9ce421780 276 Gene3D G3DSA:1.20.890.100 165 218 1.5E-18 T 14-10-2018 GYO_4197 c0503b44cd982af92ac3edc9ce421780 276 Gene3D G3DSA:1.20.58.1950 221 273 7.6E-11 T 14-10-2018 GYO_4197 c0503b44cd982af92ac3edc9ce421780 276 SMART SM01061 1 59 1.5E-23 T 14-10-2018 IPR004341 CAT RNA-binding domain GO:0003723 GYO_4197 c0503b44cd982af92ac3edc9ce421780 276 SUPERFAMILY SSF50151 2 53 1.18E-16 T 14-10-2018 IPR036650 CAT RNA-binding domain superfamily GO:0003723 GYO_4197 c0503b44cd982af92ac3edc9ce421780 276 SUPERFAMILY SSF63520 51 163 1.44E-30 T 14-10-2018 IPR036634 PRD domain superfamily GO:0006355 GYO_4197 c0503b44cd982af92ac3edc9ce421780 276 ProSitePatterns PS00654 PRD domain signature. 95 107 - T 14-10-2018 IPR001550 Transcription antiterminator, conserved site GO:0003723|GO:0045893 GYO_4197 c0503b44cd982af92ac3edc9ce421780 276 Gene3D G3DSA:1.10.1790.10 62 164 8.7E-34 T 14-10-2018 GYO_4197 c0503b44cd982af92ac3edc9ce421780 276 Gene3D G3DSA:2.30.24.10 1 55 3.5E-20 T 14-10-2018 IPR036650 CAT RNA-binding domain superfamily GO:0003723 GYO_4197 c0503b44cd982af92ac3edc9ce421780 276 Pfam PF00874 PRD domain 178 270 1.3E-23 T 14-10-2018 IPR011608 PRD domain GO:0006355 GYO_4197 c0503b44cd982af92ac3edc9ce421780 276 Pfam PF00874 PRD domain 72 159 9.4E-25 T 14-10-2018 IPR011608 PRD domain GO:0006355 GYO_1838 3dd785b951cf022af4d00792b4fad184 120 Gene3D G3DSA:3.30.310.100 1 120 2.4E-44 T 14-10-2018 IPR036491 YugN-like superfamily GYO_1838 3dd785b951cf022af4d00792b4fad184 120 SUPERFAMILY SSF160755 3 115 6.15E-39 T 14-10-2018 IPR036491 YugN-like superfamily GYO_1838 3dd785b951cf022af4d00792b4fad184 120 Pfam PF08868 YugN-like family 6 92 5.7E-13 T 14-10-2018 IPR014967 Uncharacterised protein family, YugN-like GYO_0347 7c91cc51384f9e9ac961963a9cc955ab 316 PRINTS PR00377 Inositol monophosphatase superfamily signature 80 96 9.5E-9 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 GYO_0347 7c91cc51384f9e9ac961963a9cc955ab 316 PRINTS PR00377 Inositol monophosphatase superfamily signature 36 56 9.5E-9 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 GYO_0347 7c91cc51384f9e9ac961963a9cc955ab 316 PRINTS PR00377 Inositol monophosphatase superfamily signature 241 265 9.5E-9 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 GYO_0347 7c91cc51384f9e9ac961963a9cc955ab 316 SUPERFAMILY SSF56655 31 300 4.19E-26 T 14-10-2018 GYO_0347 7c91cc51384f9e9ac961963a9cc955ab 316 Pfam PF00459 Inositol monophosphatase family 31 300 4.2E-16 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 GYO_0347 7c91cc51384f9e9ac961963a9cc955ab 316 Gene3D G3DSA:3.40.190.80 175 299 1.4E-13 T 14-10-2018 GYO_0347 7c91cc51384f9e9ac961963a9cc955ab 316 Gene3D G3DSA:3.30.540.10 2 143 6.1E-16 T 14-10-2018 GYO_2358 1957e99d18284c7261ca96750da1522d 112 Gene3D G3DSA:1.10.10.10 3 112 1.7E-39 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily GYO_2358 1957e99d18284c7261ca96750da1522d 112 SUPERFAMILY SSF46785 4 106 1.77E-29 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily GYO_2358 1957e99d18284c7261ca96750da1522d 112 Pfam PF01638 HxlR-like helix-turn-helix 15 103 3.9E-37 T 14-10-2018 IPR002577 Helix-turn-helix, HxlR type GYO_0978 8e22e9d943863cf8f6edc83817ced3ba 290 SUPERFAMILY SSF52091 169 276 4.91E-15 T 14-10-2018 IPR036513 STAS domain superfamily GYO_0978 8e22e9d943863cf8f6edc83817ced3ba 290 Pfam PF01740 STAS domain 172 272 2.9E-12 T 14-10-2018 IPR002645 STAS domain GYO_0978 8e22e9d943863cf8f6edc83817ced3ba 290 Gene3D G3DSA:3.30.750.24 166 280 3.1E-33 T 14-10-2018 IPR036513 STAS domain superfamily GYO_0537 d4cbbebfc1d1e2dcdcce75fd8703b6e4 805 SUPERFAMILY SSF56014 627 793 1.57E-49 T 14-10-2018 GYO_0537 d4cbbebfc1d1e2dcdcce75fd8703b6e4 805 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 5 27 1.6E-14 T 14-10-2018 GYO_0537 d4cbbebfc1d1e2dcdcce75fd8703b6e4 805 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 147 172 1.6E-14 T 14-10-2018 GYO_0537 d4cbbebfc1d1e2dcdcce75fd8703b6e4 805 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 272 279 1.6E-14 T 14-10-2018 GYO_0537 d4cbbebfc1d1e2dcdcce75fd8703b6e4 805 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 233 247 1.6E-14 T 14-10-2018 GYO_0537 d4cbbebfc1d1e2dcdcce75fd8703b6e4 805 Gene3D G3DSA:3.90.480.20 533 632 4.2E-5 T 14-10-2018 GYO_0537 d4cbbebfc1d1e2dcdcce75fd8703b6e4 805 SUPERFAMILY SSF51905 3 305 5.72E-42 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily GYO_0537 d4cbbebfc1d1e2dcdcce75fd8703b6e4 805 Gene3D G3DSA:3.30.390.30 316 399 8.8E-13 T 14-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 GYO_0537 d4cbbebfc1d1e2dcdcce75fd8703b6e4 805 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 5 282 4.4E-59 T 14-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 GYO_0537 d4cbbebfc1d1e2dcdcce75fd8703b6e4 805 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 102 120 6.8E-23 T 14-10-2018 GYO_0537 d4cbbebfc1d1e2dcdcce75fd8703b6e4 805 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 147 165 6.8E-23 T 14-10-2018 GYO_0537 d4cbbebfc1d1e2dcdcce75fd8703b6e4 805 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 257 279 6.8E-23 T 14-10-2018 GYO_0537 d4cbbebfc1d1e2dcdcce75fd8703b6e4 805 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 6 25 6.8E-23 T 14-10-2018 GYO_0537 d4cbbebfc1d1e2dcdcce75fd8703b6e4 805 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 232 248 6.8E-23 T 14-10-2018 GYO_0537 d4cbbebfc1d1e2dcdcce75fd8703b6e4 805 SUPERFAMILY SSF55124 514 635 1.45E-23 T 14-10-2018 IPR036136 Nitrite/Sulfite reductase ferredoxin-like domain superfamily GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 GYO_0537 d4cbbebfc1d1e2dcdcce75fd8703b6e4 805 TIGRFAM TIGR02374 nitri_red_nirB: nitrite reductase [NAD(P)H], large subunit 6 791 0.0 T 14-10-2018 IPR012744 Nitrite reductase [NAD(P)H] large subunit, NirB GO:0008942|GO:0042128|GO:0050660|GO:0050661|GO:0055114 GYO_0537 d4cbbebfc1d1e2dcdcce75fd8703b6e4 805 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 626 762 5.0E-26 T 14-10-2018 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 GYO_0537 d4cbbebfc1d1e2dcdcce75fd8703b6e4 805 Gene3D G3DSA:3.30.413.10 633 761 2.1E-31 T 14-10-2018 GYO_0537 d4cbbebfc1d1e2dcdcce75fd8703b6e4 805 Gene3D G3DSA:3.50.50.60 115 239 2.2E-92 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily GYO_0537 d4cbbebfc1d1e2dcdcce75fd8703b6e4 805 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 556 618 4.9E-13 T 14-10-2018 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 GYO_0537 d4cbbebfc1d1e2dcdcce75fd8703b6e4 805 Gene3D G3DSA:3.50.50.60 7 303 2.2E-92 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily GYO_0537 d4cbbebfc1d1e2dcdcce75fd8703b6e4 805 PRINTS PR00397 Sirohaem Fe-binding site signature 673 691 1.5E-6 T 14-10-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 GYO_0537 d4cbbebfc1d1e2dcdcce75fd8703b6e4 805 PRINTS PR00397 Sirohaem Fe-binding site signature 630 648 1.5E-6 T 14-10-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 GYO_0537 d4cbbebfc1d1e2dcdcce75fd8703b6e4 805 Gene3D G3DSA:1.10.10.1100 416 470 5.6E-11 T 14-10-2018 GYO_0537 d4cbbebfc1d1e2dcdcce75fd8703b6e4 805 Pfam PF04324 BFD-like [2Fe-2S] binding domain 416 465 6.5E-13 T 14-10-2018 IPR007419 BFD-like [2Fe-2S]-binding domain GYO_0537 d4cbbebfc1d1e2dcdcce75fd8703b6e4 805 Pfam PF04324 BFD-like [2Fe-2S] binding domain 481 530 4.1E-12 T 14-10-2018 IPR007419 BFD-like [2Fe-2S]-binding domain GYO_0537 d4cbbebfc1d1e2dcdcce75fd8703b6e4 805 PIRSF PIRSF037149 1 805 0.0 T 14-10-2018 IPR017121 Nitrite reductase [NAD(P)H], large subunit GO:0042128 GYO_0696 9bd2a94aa743dc8e298a4d80f5491da5 719 Gene3D G3DSA:3.30.420.140 320 446 2.9E-155 T 14-10-2018 IPR037027 YqgF/RNase H-like domain superfamily GO:0006139 GYO_0696 9bd2a94aa743dc8e298a4d80f5491da5 719 SUPERFAMILY SSF158832 9 316 1.57E-109 T 14-10-2018 GYO_0696 9bd2a94aa743dc8e298a4d80f5491da5 719 Gene3D G3DSA:1.10.3500.10 114 493 2.9E-155 T 14-10-2018 IPR023323 Tex-like domain superfamily GYO_0696 9bd2a94aa743dc8e298a4d80f5491da5 719 SUPERFAMILY SSF53098 317 464 2.09E-51 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily GYO_0696 9bd2a94aa743dc8e298a4d80f5491da5 719 Pfam PF09371 Tex-like protein N-terminal domain 11 195 1.4E-67 T 14-10-2018 IPR018974 Tex-like protein, N-terminal GYO_0696 9bd2a94aa743dc8e298a4d80f5491da5 719 SUPERFAMILY SSF47781 465 552 9.34E-25 T 14-10-2018 IPR010994 RuvA domain 2-like GYO_0696 9bd2a94aa743dc8e298a4d80f5491da5 719 Pfam PF16921 Tex protein YqgF-like domain 321 446 3.2E-57 T 14-10-2018 IPR032639 Tex protein, YqgF-like domain GYO_0696 9bd2a94aa743dc8e298a4d80f5491da5 719 SMART SM00732 321 419 1.2E-38 T 14-10-2018 IPR006641 YqgF/RNase H-like domain GO:0006139 GYO_0696 9bd2a94aa743dc8e298a4d80f5491da5 719 SUPERFAMILY SSF47781 556 630 2.89E-15 T 14-10-2018 IPR010994 RuvA domain 2-like GYO_0696 9bd2a94aa743dc8e298a4d80f5491da5 719 Pfam PF12836 Helix-hairpin-helix motif 486 550 2.5E-24 T 14-10-2018 GYO_0696 9bd2a94aa743dc8e298a4d80f5491da5 719 SUPERFAMILY SSF50249 633 717 2.24E-23 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold GYO_0696 9bd2a94aa743dc8e298a4d80f5491da5 719 Gene3D G3DSA:2.40.50.140 633 719 5.1E-25 T 14-10-2018 GYO_0696 9bd2a94aa743dc8e298a4d80f5491da5 719 SMART SM00316 647 718 2.2E-23 T 14-10-2018 IPR022967 RNA-binding domain, S1 GYO_0696 9bd2a94aa743dc8e298a4d80f5491da5 719 Gene3D G3DSA:1.10.150.310 494 628 5.1E-45 T 14-10-2018 GYO_0696 9bd2a94aa743dc8e298a4d80f5491da5 719 Pfam PF00575 S1 RNA binding domain 646 717 2.4E-18 T 14-10-2018 IPR003029 S1 domain GO:0003676 GYO_0696 9bd2a94aa743dc8e298a4d80f5491da5 719 Gene3D G3DSA:1.10.10.650 4 111 3.5E-37 T 14-10-2018 IPR023319 Tex-like protein, HTH domain superfamily GYO_1918 2be63a9da3f1bc359dbb72e2b73c3f50 67 TIGRFAM TIGR00690 rpoZ: DNA-directed RNA polymerase, omega subunit 1 60 1.5E-28 T 14-10-2018 IPR003716 DNA-directed RNA polymerase, omega subunit GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 GYO_1918 2be63a9da3f1bc359dbb72e2b73c3f50 67 Hamap MF_00366 DNA-directed RNA polymerase subunit omega [rpoZ]. 1 62 13.85 T 14-10-2018 IPR003716 DNA-directed RNA polymerase, omega subunit GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 GYO_1918 2be63a9da3f1bc359dbb72e2b73c3f50 67 SMART SM01409 8 61 2.9E-11 T 14-10-2018 IPR006110 RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708|Reactome: R-HSA-9018519 GYO_1918 2be63a9da3f1bc359dbb72e2b73c3f50 67 Pfam PF01192 RNA polymerase Rpb6 9 61 9.5E-12 T 14-10-2018 IPR006110 RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708|Reactome: R-HSA-9018519 GYO_1918 2be63a9da3f1bc359dbb72e2b73c3f50 67 SUPERFAMILY SSF63562 1 65 6.28E-21 T 14-10-2018 IPR036161 RPB6/omega subunit-like superfamily GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708|Reactome: R-HSA-9018519 GYO_1918 2be63a9da3f1bc359dbb72e2b73c3f50 67 Gene3D G3DSA:3.90.940.10 1 67 1.9E-16 T 14-10-2018 IPR012293 RNA polymerase subunit, RPB6/omega GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708|Reactome: R-HSA-9018519 GYO_3971 6637d00afa9813dd7f42a3299ff05c13 181 SUPERFAMILY SSF52218 1 178 7.14E-38 T 14-10-2018 IPR029039 Flavoprotein-like superfamily GYO_3971 6637d00afa9813dd7f42a3299ff05c13 181 Pfam PF03358 NADPH-dependent FMN reductase 1 124 4.2E-22 T 14-10-2018 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 GYO_3971 6637d00afa9813dd7f42a3299ff05c13 181 Gene3D G3DSA:3.40.50.360 1 181 7.5E-56 T 14-10-2018 IPR029039 Flavoprotein-like superfamily GYO_2579 f02129ebac437803042b3274c4db7b79 255 SUPERFAMILY SSF88659 171 250 4.67E-17 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like GYO_2579 f02129ebac437803042b3274c4db7b79 255 SUPERFAMILY SSF88946 13 105 5.49E-34 T 14-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 GYO_2579 f02129ebac437803042b3274c4db7b79 255 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 33 250 1.8E-37 T 14-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 GYO_2579 f02129ebac437803042b3274c4db7b79 255 Gene3D G3DSA:1.10.10.10 179 253 9.8E-12 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily GYO_2579 f02129ebac437803042b3274c4db7b79 255 SUPERFAMILY SSF88659 109 184 6.98E-17 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like GYO_2579 f02129ebac437803042b3274c4db7b79 255 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 220 246 - T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 GYO_2579 f02129ebac437803042b3274c4db7b79 255 Pfam PF04539 Sigma-70 region 3 115 187 9.1E-14 T 14-10-2018 IPR007624 RNA polymerase sigma-70 region 3 GO:0003700|GO:0006352|GO:0006355 GYO_2579 f02129ebac437803042b3274c4db7b79 255 PRINTS PR00046 Major sigma-70 factor signature 235 246 2.6E-11 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 GYO_2579 f02129ebac437803042b3274c4db7b79 255 PRINTS PR00046 Major sigma-70 factor signature 220 235 2.6E-11 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 GYO_2579 f02129ebac437803042b3274c4db7b79 255 PRINTS PR00046 Major sigma-70 factor signature 203 215 2.6E-11 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 GYO_2579 f02129ebac437803042b3274c4db7b79 255 PRINTS PR00046 Major sigma-70 factor signature 85 93 2.6E-11 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 GYO_2579 f02129ebac437803042b3274c4db7b79 255 PRINTS PR00046 Major sigma-70 factor signature 61 74 2.6E-11 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 GYO_2579 f02129ebac437803042b3274c4db7b79 255 TIGRFAM TIGR02885 spore_sigF: RNA polymerase sigma-F factor 22 249 4.3E-113 T 14-10-2018 IPR014236 RNA polymerase sigma-F type GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 GYO_2579 f02129ebac437803042b3274c4db7b79 255 Gene3D G3DSA:1.10.10.10 106 160 4.2E-21 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily GYO_2579 f02129ebac437803042b3274c4db7b79 255 PIRSF PIRSF000770 11 255 1.2E-36 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 GYO_2579 f02129ebac437803042b3274c4db7b79 255 Pfam PF04542 Sigma-70 region 2 37 104 1.3E-17 T 14-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 GYO_2579 f02129ebac437803042b3274c4db7b79 255 TIGRFAM TIGR02980 SigBFG: RNA polymerase sigma-70 factor, sigma-B/F/G subfamily 30 250 6.4E-88 T 14-10-2018 IPR014322 RNA polymerase sigma-B/F/G type GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 GYO_2579 f02129ebac437803042b3274c4db7b79 255 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 61 74 - T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 GYO_2579 f02129ebac437803042b3274c4db7b79 255 Gene3D G3DSA:1.10.601.10 3 105 3.6E-28 T 14-10-2018 GYO_2579 f02129ebac437803042b3274c4db7b79 255 Pfam PF04545 Sigma-70, region 4 199 247 4.1E-15 T 14-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 GYO_2113 e805a88dae5c0d15cf953e2629059926 384 Pfam PF13412 Winged helix-turn-helix DNA-binding 14 56 2.8E-7 T 14-10-2018 GYO_2113 e805a88dae5c0d15cf953e2629059926 384 Pfam PF00480 ROK family 83 375 2.4E-100 T 14-10-2018 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 GYO_2113 e805a88dae5c0d15cf953e2629059926 384 SUPERFAMILY SSF46785 8 74 2.04E-17 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily GYO_2113 e805a88dae5c0d15cf953e2629059926 384 ProSitePatterns PS01125 ROK family signature. 213 240 - T 14-10-2018 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 GYO_2113 e805a88dae5c0d15cf953e2629059926 384 Gene3D G3DSA:3.30.420.40 81 377 9.4E-92 T 14-10-2018 GYO_2113 e805a88dae5c0d15cf953e2629059926 384 SUPERFAMILY SSF53067 80 379 3.24E-59 T 14-10-2018 GYO_2113 e805a88dae5c0d15cf953e2629059926 384 Gene3D G3DSA:1.10.10.10 2 76 2.1E-19 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily GYO_2113 e805a88dae5c0d15cf953e2629059926 384 Gene3D G3DSA:3.30.420.40 204 358 9.4E-92 T 14-10-2018 GYO_1494 9f989bbc5d7e11dbb2ab57e7c43cf635 381 PIRSF PIRSF001434 2 374 1.7E-122 T 14-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 GYO_1494 9f989bbc5d7e11dbb2ab57e7c43cf635 381 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 14 370 4.6E-138 T 14-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 GYO_1494 9f989bbc5d7e11dbb2ab57e7c43cf635 381 Gene3D G3DSA:3.40.640.10 11 254 1.4E-87 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 GYO_1494 9f989bbc5d7e11dbb2ab57e7c43cf635 381 Gene3D G3DSA:3.90.1150.10 287 371 6.6E-24 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 GYO_1494 9f989bbc5d7e11dbb2ab57e7c43cf635 381 Gene3D G3DSA:3.90.1150.10 255 286 8.3E-8 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 GYO_1494 9f989bbc5d7e11dbb2ab57e7c43cf635 381 ProSitePatterns PS00868 Cys/Met metabolism enzymes pyridoxal-phosphate attachment site. 197 211 - T 14-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 GYO_1494 9f989bbc5d7e11dbb2ab57e7c43cf635 381 SUPERFAMILY SSF53383 25 370 2.42E-104 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase GYO_2029 ef694b47dc04b242809849445f556af2 297 Gene3D G3DSA:3.40.50.720 126 272 9.0E-113 T 14-10-2018 GYO_2029 ef694b47dc04b242809849445f556af2 297 TIGRFAM TIGR02853 spore_dpaA: dipicolinic acid synthetase, A subunit 5 290 4.3E-138 T 14-10-2018 IPR014215 Dipicolinic acid synthetase subunit A GYO_2029 ef694b47dc04b242809849445f556af2 297 Gene3D G3DSA:3.40.50.720 7 288 9.0E-113 T 14-10-2018 GYO_2029 ef694b47dc04b242809849445f556af2 297 Pfam PF16924 Dipicolinate synthase subunit A N-terminal domain 6 123 1.4E-31 T 14-10-2018 IPR031629 Dipicolinate synthase subunit A, N-terminal GYO_2029 ef694b47dc04b242809849445f556af2 297 SUPERFAMILY SSF51735 131 248 2.82E-19 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily GYO_2029 ef694b47dc04b242809849445f556af2 297 Pfam PF01262 Alanine dehydrogenase/PNT, C-terminal domain 152 295 6.2E-11 T 14-10-2018 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain GYO_1831 04a72ab66663d8a332aae0eeb5d8109b 305 Pfam PF01040 UbiA prenyltransferase family 38 288 4.6E-57 T 14-10-2018 IPR000537 UbiA prenyltransferase family GO:0016021|GO:0016765 GYO_1831 04a72ab66663d8a332aae0eeb5d8109b 305 ProSitePatterns PS00943 UbiA prenyltransferase family signature. 81 103 - T 14-10-2018 IPR030470 UbiA prenyltransferase conserved site GYO_1831 04a72ab66663d8a332aae0eeb5d8109b 305 Gene3D G3DSA:1.10.357.140 28 189 5.8E-18 T 14-10-2018 GYO_1831 04a72ab66663d8a332aae0eeb5d8109b 305 Hamap MF_00154 Protoheme IX farnesyltransferase [cyoE]. 21 304 18.39 T 14-10-2018 IPR006369 Protohaem IX farnesyltransferase GO:0008495|GO:0016021|GO:0048034 Reactome: R-HSA-189451 GYO_1831 04a72ab66663d8a332aae0eeb5d8109b 305 TIGRFAM TIGR01473 cyoE_ctaB: protoheme IX farnesyltransferase 23 301 1.6E-98 T 14-10-2018 IPR006369 Protohaem IX farnesyltransferase GO:0008495|GO:0016021|GO:0048034 Reactome: R-HSA-189451 GYO_3184 f819fdebeb9fb082607385a9e35c6c47 227 SMART SM00849 7 193 3.9E-12 T 14-10-2018 IPR001279 Metallo-beta-lactamase GYO_3184 f819fdebeb9fb082607385a9e35c6c47 227 Hamap MF_00457 UPF0173 metal-dependent hydrolase . 1 227 36.908 T 14-10-2018 IPR022877 Protein of unknown funcion UPF0173 GYO_3184 f819fdebeb9fb082607385a9e35c6c47 227 SUPERFAMILY SSF56281 1 208 4.06E-34 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like GYO_3184 f819fdebeb9fb082607385a9e35c6c47 227 Gene3D G3DSA:3.60.15.10 1 227 2.6E-71 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like GYO_3184 f819fdebeb9fb082607385a9e35c6c47 227 Pfam PF13483 Beta-lactamase superfamily domain 2 193 1.3E-25 T 14-10-2018 GYO_0112 e5ee574a51c73267c5e1df6e99d9eb75 810 SMART SM01086 714 803 2.6E-36 T 14-10-2018 IPR019489 Clp ATPase, C-terminal GYO_0112 e5ee574a51c73267c5e1df6e99d9eb75 810 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 648 662 1.0E-42 T 14-10-2018 IPR001270 ClpA/B family GO:0005524 GYO_0112 e5ee574a51c73267c5e1df6e99d9eb75 810 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 541 559 1.0E-42 T 14-10-2018 IPR001270 ClpA/B family GO:0005524 GYO_0112 e5ee574a51c73267c5e1df6e99d9eb75 810 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 586 604 1.0E-42 T 14-10-2018 IPR001270 ClpA/B family GO:0005524 GYO_0112 e5ee574a51c73267c5e1df6e99d9eb75 810 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 615 633 1.0E-42 T 14-10-2018 IPR001270 ClpA/B family GO:0005524 GYO_0112 e5ee574a51c73267c5e1df6e99d9eb75 810 Gene3D G3DSA:1.10.1780.10 1 150 6.9E-64 T 14-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 GYO_0112 e5ee574a51c73267c5e1df6e99d9eb75 810 Gene3D G3DSA:1.10.8.60 714 810 5.5E-28 T 14-10-2018 GYO_0112 e5ee574a51c73267c5e1df6e99d9eb75 810 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 714 793 2.7E-25 T 14-10-2018 IPR019489 Clp ATPase, C-terminal GYO_0112 e5ee574a51c73267c5e1df6e99d9eb75 810 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 205 317 1.6E-13 T 14-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 GYO_0112 e5ee574a51c73267c5e1df6e99d9eb75 810 Gene3D G3DSA:3.40.50.300 151 343 6.5E-72 T 14-10-2018 GYO_0112 e5ee574a51c73267c5e1df6e99d9eb75 810 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 17 69 2.1E-17 T 14-10-2018 IPR004176 Clp, N-terminal GYO_0112 e5ee574a51c73267c5e1df6e99d9eb75 810 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 93 143 2.0E-18 T 14-10-2018 IPR004176 Clp, N-terminal GYO_0112 e5ee574a51c73267c5e1df6e99d9eb75 810 Gene3D G3DSA:1.10.8.60 346 481 3.0E-54 T 14-10-2018 GYO_0112 e5ee574a51c73267c5e1df6e99d9eb75 810 Gene3D G3DSA:3.40.50.300 489 712 8.5E-91 T 14-10-2018 GYO_0112 e5ee574a51c73267c5e1df6e99d9eb75 810 Pfam PF02151 UvrB/uvrC motif 417 452 4.9E-7 T 14-10-2018 IPR001943 UVR domain GO:0005515 GYO_0112 e5ee574a51c73267c5e1df6e99d9eb75 810 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 295 307 - T 14-10-2018 IPR018368 ClpA/B, conserved site 1 GO:0005524 GYO_0112 e5ee574a51c73267c5e1df6e99d9eb75 810 Gene3D G3DSA:4.10.860.10 409 467 3.0E-54 T 14-10-2018 GYO_0112 e5ee574a51c73267c5e1df6e99d9eb75 810 SUPERFAMILY SSF52540 486 802 1.3E-80 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase GYO_0112 e5ee574a51c73267c5e1df6e99d9eb75 810 SMART SM00382 537 681 2.0E-11 T 14-10-2018 IPR003593 AAA+ ATPase domain GYO_0112 e5ee574a51c73267c5e1df6e99d9eb75 810 SMART SM00382 200 343 1.2E-11 T 14-10-2018 IPR003593 AAA+ ATPase domain GYO_0112 e5ee574a51c73267c5e1df6e99d9eb75 810 SUPERFAMILY SSF52540 161 466 3.97E-77 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase GYO_0112 e5ee574a51c73267c5e1df6e99d9eb75 810 Pfam PF07724 AAA domain (Cdc48 subfamily) 536 708 2.0E-57 T 14-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 GYO_0112 e5ee574a51c73267c5e1df6e99d9eb75 810 SUPERFAMILY SSF81923 5 149 8.63E-34 T 14-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 GYO_0112 e5ee574a51c73267c5e1df6e99d9eb75 810 ProSitePatterns PS00871 Chaperonins clpA/B signature 2. 571 589 - T 14-10-2018 IPR028299 ClpA/B, conserved site 2 GYO_3530 ef49307487d489d5a5728c49705e828c 462 SUPERFAMILY SSF55816 283 461 1.96E-26 T 14-10-2018 IPR036907 5'-Nucleotidase, C-terminal domain superfamily GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 GYO_3530 ef49307487d489d5a5728c49705e828c 462 Gene3D G3DSA:3.90.780.10 280 459 1.7E-16 T 14-10-2018 IPR036907 5'-Nucleotidase, C-terminal domain superfamily GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 GYO_3530 ef49307487d489d5a5728c49705e828c 462 Pfam PF02872 5'-nucleotidase, C-terminal domain 287 427 7.3E-15 T 14-10-2018 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 GYO_3530 ef49307487d489d5a5728c49705e828c 462 Gene3D G3DSA:3.60.21.10 1 279 3.0E-58 T 14-10-2018 IPR029052 Metallo-dependent phosphatase-like GYO_3530 ef49307487d489d5a5728c49705e828c 462 PIRSF PIRSF036361 1 462 5.2E-196 T 14-10-2018 IPR011240 Phosphoesterase-related protein YunD GYO_3530 ef49307487d489d5a5728c49705e828c 462 SUPERFAMILY SSF56300 4 277 1.78E-69 T 14-10-2018 GYO_3530 ef49307487d489d5a5728c49705e828c 462 PRINTS PR01607 Apyrase family signature 3 21 9.2E-17 T 14-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 GYO_3530 ef49307487d489d5a5728c49705e828c 462 PRINTS PR01607 Apyrase family signature 330 353 9.2E-17 T 14-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 GYO_3530 ef49307487d489d5a5728c49705e828c 462 PRINTS PR01607 Apyrase family signature 188 211 9.2E-17 T 14-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 GYO_3530 ef49307487d489d5a5728c49705e828c 462 PRINTS PR01607 Apyrase family signature 414 433 9.2E-17 T 14-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 GYO_3530 ef49307487d489d5a5728c49705e828c 462 PRINTS PR01607 Apyrase family signature 169 186 9.2E-17 T 14-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 GYO_3530 ef49307487d489d5a5728c49705e828c 462 PRINTS PR01607 Apyrase family signature 216 236 9.2E-17 T 14-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 GYO_2498 0832a577234e8fd3986d4c0d5127d62f 390 ProSitePatterns PS00788 Chorismate synthase signature 2. 131 147 - T 14-10-2018 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 GYO_2498 0832a577234e8fd3986d4c0d5127d62f 390 Hamap MF_00300 Chorismate synthase [aroC]. 1 372 36.539 T 14-10-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 GYO_2498 0832a577234e8fd3986d4c0d5127d62f 390 TIGRFAM TIGR00033 aroC: chorismate synthase 1 369 2.1E-128 T 14-10-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 GYO_2498 0832a577234e8fd3986d4c0d5127d62f 390 ProSitePatterns PS00787 Chorismate synthase signature 1. 7 22 - T 14-10-2018 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 GYO_2498 0832a577234e8fd3986d4c0d5127d62f 390 Gene3D G3DSA:3.60.150.10 1 389 8.9E-156 T 14-10-2018 IPR035904 Chorismate synthase AroC superfamily KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 GYO_2498 0832a577234e8fd3986d4c0d5127d62f 390 ProSitePatterns PS00789 Chorismate synthase signature 3. 339 355 - T 14-10-2018 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 GYO_2498 0832a577234e8fd3986d4c0d5127d62f 390 SUPERFAMILY SSF103263 1 388 9.81E-150 T 14-10-2018 IPR035904 Chorismate synthase AroC superfamily KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 GYO_2498 0832a577234e8fd3986d4c0d5127d62f 390 PIRSF PIRSF001456 1 383 1.5E-132 T 14-10-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 GYO_2498 0832a577234e8fd3986d4c0d5127d62f 390 Pfam PF01264 Chorismate synthase 1 364 7.9E-125 T 14-10-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 GYO_3424 bf7b49680296a24de5710470ae4fb1ac 390 SUPERFAMILY SSF56796 1 388 7.07E-117 T 14-10-2018 GYO_3424 bf7b49680296a24de5710470ae4fb1ac 390 Gene3D G3DSA:1.20.1090.10 185 389 8.8E-45 T 14-10-2018 GYO_3424 bf7b49680296a24de5710470ae4fb1ac 390 Pfam PF00465 Iron-containing alcohol dehydrogenase 9 368 3.9E-100 T 14-10-2018 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA GO:0016491|GO:0046872|GO:0055114 Reactome: R-HSA-880009 GYO_3424 bf7b49680296a24de5710470ae4fb1ac 390 Gene3D G3DSA:3.40.50.1970 1 184 1.1E-56 T 14-10-2018 GYO_3424 bf7b49680296a24de5710470ae4fb1ac 390 ProSitePatterns PS00060 Iron-containing alcohol dehydrogenases signature 2. 264 284 - T 14-10-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 GYO_3424 bf7b49680296a24de5710470ae4fb1ac 390 ProSitePatterns PS00913 Iron-containing alcohol dehydrogenases signature 1. 173 201 - T 14-10-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 GYO_2839 7f4c51d4ccee83f0dbf21e6c1630643b 46 SUPERFAMILY SSF100985 1 45 1.44E-17 T 14-10-2018 IPR036916 Sporulation inhibitor A superfamily GYO_2839 7f4c51d4ccee83f0dbf21e6c1630643b 46 Pfam PF08970 Sporulation inhibitor A 1 44 2.0E-22 T 14-10-2018 IPR015064 Sporulation inhibitor A GYO_2839 7f4c51d4ccee83f0dbf21e6c1630643b 46 Gene3D G3DSA:1.10.287.1100 4 37 5.6E-21 T 14-10-2018 IPR036916 Sporulation inhibitor A superfamily GYO_1899 1f9b4ac2a288aaea7fc505e5d85510fa 428 TIGRFAM TIGR00857 pyrC_multi: dihydroorotase, multifunctional complex type 15 424 1.2E-167 T 14-10-2018 GYO_1899 1f9b4ac2a288aaea7fc505e5d85510fa 428 SUPERFAMILY SSF51338 1 427 2.16E-28 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 GYO_1899 1f9b4ac2a288aaea7fc505e5d85510fa 428 ProSitePatterns PS00483 Dihydroorotase signature 2. 302 313 - T 14-10-2018 IPR002195 Dihydroorotase, conserved site GO:0016812 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 GYO_1899 1f9b4ac2a288aaea7fc505e5d85510fa 428 ProSitePatterns PS00482 Dihydroorotase signature 1. 57 65 - T 14-10-2018 IPR002195 Dihydroorotase, conserved site GO:0016812 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 GYO_1899 1f9b4ac2a288aaea7fc505e5d85510fa 428 Pfam PF01979 Amidohydrolase family 51 419 1.9E-59 T 14-10-2018 IPR006680 Amidohydrolase-related GO:0016787 GYO_1899 1f9b4ac2a288aaea7fc505e5d85510fa 428 Gene3D G3DSA:2.30.40.10 7 419 2.5E-151 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 GYO_1899 1f9b4ac2a288aaea7fc505e5d85510fa 428 SUPERFAMILY SSF51556 54 367 3.08E-110 T 14-10-2018 IPR032466 Metal-dependent hydrolase GYO_1899 1f9b4ac2a288aaea7fc505e5d85510fa 428 Hamap MF_00220_B Dihydroorotase [pyrC]. 3 423 45.119 T 14-10-2018 IPR004722 Dihydroorotase GO:0004151|GO:0006221|GO:0046872 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 GYO_1899 1f9b4ac2a288aaea7fc505e5d85510fa 428 Gene3D G3DSA:3.20.20.140 54 366 2.5E-151 T 14-10-2018 GYO_0522 554dd3a54252f4f1b6117c86fe86e470 324 Gene3D G3DSA:1.10.10.10 1 92 7.5E-27 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily GYO_0522 554dd3a54252f4f1b6117c86fe86e470 324 SUPERFAMILY SSF46785 1 87 1.48E-22 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily GYO_0522 554dd3a54252f4f1b6117c86fe86e470 324 SUPERFAMILY SSF53850 88 311 6.66E-37 T 14-10-2018 GYO_0522 554dd3a54252f4f1b6117c86fe86e470 324 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 62 1.2E-20 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 GYO_0522 554dd3a54252f4f1b6117c86fe86e470 324 Gene3D G3DSA:3.40.190.290 93 315 3.5E-52 T 14-10-2018 GYO_0522 554dd3a54252f4f1b6117c86fe86e470 324 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 4.4E-11 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 GYO_0522 554dd3a54252f4f1b6117c86fe86e470 324 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 4.4E-11 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 GYO_0522 554dd3a54252f4f1b6117c86fe86e470 324 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 4.4E-11 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 GYO_0522 554dd3a54252f4f1b6117c86fe86e470 324 Pfam PF03466 LysR substrate binding domain 86 308 1.1E-61 T 14-10-2018 IPR005119 LysR, substrate-binding GYO_2644 3b1b8e2c7ed0b0f338e8e01e97b70272 145 TIGRFAM TIGR04191 YphP_YqiW: putative bacilliredoxin, YphP/YqiW family 8 142 1.2E-63 T 14-10-2018 IPR009474 Putative bacilliredoxin, YphP/YqiW family GYO_2644 3b1b8e2c7ed0b0f338e8e01e97b70272 145 Pfam PF06491 Disulphide isomerase 8 142 9.1E-63 T 14-10-2018 IPR009474 Putative bacilliredoxin, YphP/YqiW family GYO_2644 3b1b8e2c7ed0b0f338e8e01e97b70272 145 Gene3D G3DSA:3.40.30.10 25 142 5.1E-55 T 14-10-2018 GYO_0591 9967c6722b8fb44164bedfd77b4dac73 227 Pfam PF00486 Transcriptional regulatory protein, C terminal 154 224 1.6E-29 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 GYO_0591 9967c6722b8fb44164bedfd77b4dac73 227 SMART SM00862 149 224 2.6E-30 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 GYO_0591 9967c6722b8fb44164bedfd77b4dac73 227 SUPERFAMILY SSF52172 1 124 4.84E-39 T 14-10-2018 IPR011006 CheY-like superfamily GYO_0591 9967c6722b8fb44164bedfd77b4dac73 227 Gene3D G3DSA:1.10.10.10 129 227 8.7E-37 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily GYO_0591 9967c6722b8fb44164bedfd77b4dac73 227 SMART SM00448 1 111 8.7E-41 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 GYO_0591 9967c6722b8fb44164bedfd77b4dac73 227 Gene3D G3DSA:3.40.50.2300 1 127 1.4E-35 T 14-10-2018 GYO_0591 9967c6722b8fb44164bedfd77b4dac73 227 SUPERFAMILY SSF46894 127 225 6.34E-31 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 GYO_0591 9967c6722b8fb44164bedfd77b4dac73 227 Pfam PF00072 Response regulator receiver domain 3 112 2.3E-25 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 GYO_4491 3cc71207170f51cbab4061eac186741e 142 Pfam PF13673 Acetyltransferase (GNAT) domain 34 142 9.4E-18 T 14-10-2018 IPR000182 GNAT domain GYO_4491 3cc71207170f51cbab4061eac186741e 142 Gene3D G3DSA:3.40.630.30 1 142 5.2E-41 T 14-10-2018 GYO_4491 3cc71207170f51cbab4061eac186741e 142 SUPERFAMILY SSF55729 4 142 1.54E-34 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase GYO_4206 c6f387e7ef267bd2a7ae6e718de912ce 124 TIGRFAM TIGR02901 QoxD: cytochrome aa3 quinol oxidase, subunit IV 8 99 5.8E-36 T 14-10-2018 IPR014250 Quinol oxidase subunit IV GO:0016021|GO:0016682|GO:0042773 GYO_4206 c6f387e7ef267bd2a7ae6e718de912ce 124 Pfam PF03626 Prokaryotic Cytochrome C oxidase subunit IV 16 89 4.9E-13 T 14-10-2018 IPR005171 Cytochrome C oxidase subunit IV, prokaryotes GO:0016021 GYO_4443 6f5a58298763197e5ec71723a7eaf06b 401 PIRSF PIRSF000521 2 163 2.9E-8 T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 GYO_4443 6f5a58298763197e5ec71723a7eaf06b 401 PIRSF PIRSF000521 177 401 4.4E-32 T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 GYO_4443 6f5a58298763197e5ec71723a7eaf06b 401 SUPERFAMILY SSF53383 5 399 3.63E-123 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase GYO_4443 6f5a58298763197e5ec71723a7eaf06b 401 Gene3D G3DSA:3.90.1150.10 26 388 4.2E-149 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 GYO_4443 6f5a58298763197e5ec71723a7eaf06b 401 TIGRFAM TIGR01885 Orn_aminotrans: ornithine--oxo-acid transaminase 7 398 2.5E-162 T 14-10-2018 IPR010164 Ornithine aminotransferase GO:0004587 KEGG: 00330+2.6.1.13|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|MetaCyc: PWY-6922|Reactome: R-HSA-70614 GYO_4443 6f5a58298763197e5ec71723a7eaf06b 401 Hamap MF_01689 Ornithine aminotransferase [rocD]. 7 399 65.62 T 14-10-2018 IPR034757 Ornithine aminotransferase, bacterial type GO:0004587 KEGG: 00330+2.6.1.13|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|MetaCyc: PWY-6922 GYO_4443 6f5a58298763197e5ec71723a7eaf06b 401 Pfam PF00202 Aminotransferase class-III 18 398 7.5E-137 T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 GYO_4443 6f5a58298763197e5ec71723a7eaf06b 401 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 226 263 - T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 GYO_4443 6f5a58298763197e5ec71723a7eaf06b 401 Gene3D G3DSA:3.40.640.10 61 309 4.2E-149 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 GYO_3743 2ecf5b52163cc502eadb47763b878185 403 SUPERFAMILY SSF81606 204 402 1.57E-9 T 14-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 GYO_3743 2ecf5b52163cc502eadb47763b878185 403 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 6 117 1.1E-10 T 14-10-2018 IPR000014 PAS domain GYO_3743 2ecf5b52163cc502eadb47763b878185 403 Pfam PF13426 PAS domain 9 106 3.9E-10 T 14-10-2018 IPR000014 PAS domain GYO_3743 2ecf5b52163cc502eadb47763b878185 403 Pfam PF07228 Stage II sporulation protein E (SpoIIE) 216 401 4.3E-40 T 14-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 GYO_3743 2ecf5b52163cc502eadb47763b878185 403 Gene3D G3DSA:3.30.450.20 2 107 1.4E-12 T 14-10-2018 GYO_3743 2ecf5b52163cc502eadb47763b878185 403 SMART SM00331 189 402 2.5E-68 T 14-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 GYO_3743 2ecf5b52163cc502eadb47763b878185 403 Gene3D G3DSA:3.60.40.10 156 401 2.1E-49 T 14-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 GYO_3743 2ecf5b52163cc502eadb47763b878185 403 SUPERFAMILY SSF55785 5 106 3.49E-13 T 14-10-2018 IPR035965 PAS domain superfamily GYO_2878 242ea2fceecf7f34a69d7677e2c0edb3 363 Gene3D G3DSA:3.30.565.10 219 356 4.6E-25 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily GYO_2878 242ea2fceecf7f34a69d7677e2c0edb3 363 Pfam PF07730 Histidine kinase 155 220 2.1E-12 T 14-10-2018 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 GYO_2878 242ea2fceecf7f34a69d7677e2c0edb3 363 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 23 138 1.8E-13 T 14-10-2018 IPR000014 PAS domain GYO_2878 242ea2fceecf7f34a69d7677e2c0edb3 363 SUPERFAMILY SSF55874 231 347 3.14E-18 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily GYO_2878 242ea2fceecf7f34a69d7677e2c0edb3 363 SUPERFAMILY SSF55785 23 130 1.61E-10 T 14-10-2018 IPR035965 PAS domain superfamily GYO_2878 242ea2fceecf7f34a69d7677e2c0edb3 363 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 262 350 2.2E-8 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase GYO_2878 242ea2fceecf7f34a69d7677e2c0edb3 363 Gene3D G3DSA:3.30.450.20 15 138 2.1E-12 T 14-10-2018 GYO_2878 242ea2fceecf7f34a69d7677e2c0edb3 363 PIRSF PIRSF037432 12 350 5.9E-47 T 14-10-2018 IPR017203 Signal transduction histidine kinase, NreB GO:0000155|GO:0004673|GO:0005506|GO:0005524|GO:0005737|GO:0018106 GYO_2878 242ea2fceecf7f34a69d7677e2c0edb3 363 Pfam PF13188 PAS domain 23 61 4.8E-8 T 14-10-2018 IPR000014 PAS domain GYO_2878 242ea2fceecf7f34a69d7677e2c0edb3 363 SMART SM00387 260 352 2.6E-9 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase GYO_2463 c325606c525a589b97dcbec3e4fee0f1 393 Pfam PF00155 Aminotransferase class I and II 31 385 4.9E-83 T 14-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 GYO_2463 c325606c525a589b97dcbec3e4fee0f1 393 Gene3D G3DSA:3.40.640.10 62 284 1.0E-143 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 GYO_2463 c325606c525a589b97dcbec3e4fee0f1 393 SUPERFAMILY SSF53383 3 391 1.06E-121 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase GYO_2463 c325606c525a589b97dcbec3e4fee0f1 393 PRINTS PR00753 1-aminocyclopropane-1-carboxylate synthase signature 197 220 6.9E-16 T 14-10-2018 GYO_2463 c325606c525a589b97dcbec3e4fee0f1 393 PRINTS PR00753 1-aminocyclopropane-1-carboxylate synthase signature 114 135 6.9E-16 T 14-10-2018 GYO_2463 c325606c525a589b97dcbec3e4fee0f1 393 PRINTS PR00753 1-aminocyclopropane-1-carboxylate synthase signature 161 185 6.9E-16 T 14-10-2018 GYO_2463 c325606c525a589b97dcbec3e4fee0f1 393 PRINTS PR00753 1-aminocyclopropane-1-carboxylate synthase signature 92 112 6.9E-16 T 14-10-2018 GYO_2463 c325606c525a589b97dcbec3e4fee0f1 393 PRINTS PR00753 1-aminocyclopropane-1-carboxylate synthase signature 228 252 6.9E-16 T 14-10-2018 GYO_2463 c325606c525a589b97dcbec3e4fee0f1 393 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 234 247 - T 14-10-2018 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 GYO_2463 c325606c525a589b97dcbec3e4fee0f1 393 Gene3D G3DSA:3.90.1150.10 25 385 1.0E-143 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 GYO_4426 019eba36c356cfbad9970cd5caf6dbb0 49 TIGRFAM TIGR04077 expor_sig_YdyF: exported signaling peptide, YydF/SAG_2028 family 1 49 3.2E-30 T 14-10-2018 IPR023898 YydF/SAG 2028 GYO_3231 3455f9dfa047e374549847d271be89a2 107 Gene3D G3DSA:3.40.30.10 1 104 1.3E-21 T 14-10-2018 GYO_3231 3455f9dfa047e374549847d271be89a2 107 Pfam PF00085 Thioredoxin 8 101 8.7E-16 T 14-10-2018 IPR013766 Thioredoxin domain GO:0045454 GYO_3231 3455f9dfa047e374549847d271be89a2 107 SUPERFAMILY SSF52833 2 102 1.95E-25 T 14-10-2018 IPR036249 Thioredoxin-like superfamily GYO_0738 e9cc0ec5dbb501f066df3dccb6fd6d78 402 Gene3D G3DSA:1.20.1250.20 13 207 1.9E-16 T 14-10-2018 GYO_0738 e9cc0ec5dbb501f066df3dccb6fd6d78 402 SUPERFAMILY SSF103473 11 394 1.83E-49 T 14-10-2018 IPR036259 MFS transporter superfamily GYO_0738 e9cc0ec5dbb501f066df3dccb6fd6d78 402 Gene3D G3DSA:1.20.1250.20 210 400 6.4E-21 T 14-10-2018 GYO_0738 e9cc0ec5dbb501f066df3dccb6fd6d78 402 TIGRFAM TIGR00896 CynX: cyanate transporter 22 378 4.1E-124 T 14-10-2018 IPR004747 Cyanate transport system protein GO:0016021 GYO_0738 e9cc0ec5dbb501f066df3dccb6fd6d78 402 Pfam PF07690 Major Facilitator Superfamily 30 359 1.7E-23 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 GYO_1914 18efea32808af712007b6b269ad44b0f 890 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 326 332 - T 14-10-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 GYO_1914 18efea32808af712007b6b269ad44b0f 890 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 488 506 2.0E-18 T 14-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 GYO_1914 18efea32808af712007b6b269ad44b0f 890 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 631 647 2.0E-18 T 14-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 GYO_1914 18efea32808af712007b6b269ad44b0f 890 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 603 619 2.0E-18 T 14-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 GYO_1914 18efea32808af712007b6b269ad44b0f 890 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 663 688 2.0E-18 T 14-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 GYO_1914 18efea32808af712007b6b269ad44b0f 890 SUPERFAMILY SSF81660 332 533 1.74E-56 T 14-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 GYO_1914 18efea32808af712007b6b269ad44b0f 890 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 421 575 2.6E-20 T 14-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 GYO_1914 18efea32808af712007b6b269ad44b0f 890 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 83 345 3.4E-45 T 14-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 GYO_1914 18efea32808af712007b6b269ad44b0f 890 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 597 721 6.0E-38 T 14-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 GYO_1914 18efea32808af712007b6b269ad44b0f 890 Pfam PF00690 Cation transporter/ATPase, N-terminus 4 71 5.1E-19 T 14-10-2018 IPR004014 Cation-transporting P-type ATPase, N-terminal Reactome: R-HSA-936837 GYO_1914 18efea32808af712007b6b269ad44b0f 890 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 655 667 1.4E-41 T 14-10-2018 GYO_1914 18efea32808af712007b6b269ad44b0f 890 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 551 561 1.4E-41 T 14-10-2018 GYO_1914 18efea32808af712007b6b269ad44b0f 890 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 631 650 1.4E-41 T 14-10-2018 GYO_1914 18efea32808af712007b6b269ad44b0f 890 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 161 175 1.4E-41 T 14-10-2018 GYO_1914 18efea32808af712007b6b269ad44b0f 890 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 529 540 1.4E-41 T 14-10-2018 GYO_1914 18efea32808af712007b6b269ad44b0f 890 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 324 338 1.4E-41 T 14-10-2018 GYO_1914 18efea32808af712007b6b269ad44b0f 890 Gene3D G3DSA:3.40.50.1000 321 676 0.0 T 14-10-2018 IPR023214 HAD superfamily GYO_1914 18efea32808af712007b6b269ad44b0f 890 TIGRFAM TIGR01116 ATPase-IIA1_Ca: calcium-translocating P-type ATPase, SERCA-type 54 881 2.1E-213 T 14-10-2018 IPR005782 P-type ATPase, subfamily IIA, SERCA-type GO:0005388|GO:0006816|GO:0016021 Reactome: R-HSA-1912420|Reactome: R-HSA-418359|Reactome: R-HSA-5578775|Reactome: R-HSA-936837 GYO_1914 18efea32808af712007b6b269ad44b0f 890 Gene3D G3DSA:3.40.1110.10 334 536 0.0 T 14-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 GYO_1914 18efea32808af712007b6b269ad44b0f 890 SMART SM00831 2 76 1.3E-25 T 14-10-2018 IPR004014 Cation-transporting P-type ATPase, N-terminal Reactome: R-HSA-936837 GYO_1914 18efea32808af712007b6b269ad44b0f 890 SUPERFAMILY SSF81665 1 880 5.89E-136 T 14-10-2018 IPR023298 P-type ATPase, transmembrane domain superfamily Reactome: R-HSA-936837 GYO_1914 18efea32808af712007b6b269ad44b0f 890 Pfam PF00702 haloacid dehalogenase-like hydrolase 323 645 1.2E-25 T 14-10-2018 GYO_1914 18efea32808af712007b6b269ad44b0f 890 SUPERFAMILY SSF81653 114 224 1.7E-31 T 14-10-2018 IPR008250 P-type ATPase, A domain superfamily Reactome: R-HSA-936837 GYO_1914 18efea32808af712007b6b269ad44b0f 890 Pfam PF00689 Cation transporting ATPase, C-terminus 715 880 1.4E-52 T 14-10-2018 IPR006068 Cation-transporting P-type ATPase, C-terminal Reactome: R-HSA-936837 GYO_1914 18efea32808af712007b6b269ad44b0f 890 SUPERFAMILY SSF56784 322 735 1.3E-66 T 14-10-2018 IPR036412 HAD-like superfamily GYO_1914 18efea32808af712007b6b269ad44b0f 890 Gene3D G3DSA:2.70.150.10 16 227 0.0 T 14-10-2018 GYO_1914 18efea32808af712007b6b269ad44b0f 890 Gene3D G3DSA:1.20.1110.10 54 877 0.0 T 14-10-2018 GYO_1914 18efea32808af712007b6b269ad44b0f 890 Pfam PF00122 E1-E2 ATPase 111 304 2.1E-53 T 14-10-2018 GYO_1798 79472f7cc1d16264c8c5906f127aa729 325 SUPERFAMILY SSF52922 188 325 2.09E-41 T 14-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 GYO_1798 79472f7cc1d16264c8c5906f127aa729 325 Gene3D G3DSA:3.40.50.970 1 192 6.6E-81 T 14-10-2018 GYO_1798 79472f7cc1d16264c8c5906f127aa729 325 Pfam PF02780 Transketolase, C-terminal domain 194 314 4.6E-40 T 14-10-2018 IPR033248 Transketolase, C-terminal domain GYO_1798 79472f7cc1d16264c8c5906f127aa729 325 SUPERFAMILY SSF52518 2 204 2.41E-66 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold GYO_1798 79472f7cc1d16264c8c5906f127aa729 325 Pfam PF02779 Transketolase, pyrimidine binding domain 3 178 1.6E-40 T 14-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain GYO_1798 79472f7cc1d16264c8c5906f127aa729 325 Gene3D G3DSA:3.40.50.920 193 325 2.0E-47 T 14-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 GYO_1798 79472f7cc1d16264c8c5906f127aa729 325 SMART SM00861 4 179 4.6E-63 T 14-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain GYO_1609 de6bf6540d575256fffb7e947017e9bc 453 SMART SM00228 346 436 1.7E-12 T 14-10-2018 IPR001478 PDZ domain GO:0005515 GYO_1609 de6bf6540d575256fffb7e947017e9bc 453 PRINTS PR00834 HtrA/DegQ protease family signature 176 188 1.3E-38 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 GYO_1609 de6bf6540d575256fffb7e947017e9bc 453 PRINTS PR00834 HtrA/DegQ protease family signature 279 296 1.3E-38 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 GYO_1609 de6bf6540d575256fffb7e947017e9bc 453 PRINTS PR00834 HtrA/DegQ protease family signature 393 405 1.3E-38 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 GYO_1609 de6bf6540d575256fffb7e947017e9bc 453 PRINTS PR00834 HtrA/DegQ protease family signature 197 217 1.3E-38 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 GYO_1609 de6bf6540d575256fffb7e947017e9bc 453 PRINTS PR00834 HtrA/DegQ protease family signature 238 262 1.3E-38 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 GYO_1609 de6bf6540d575256fffb7e947017e9bc 453 PRINTS PR00834 HtrA/DegQ protease family signature 301 318 1.3E-38 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 GYO_1609 de6bf6540d575256fffb7e947017e9bc 453 SUPERFAMILY SSF50156 330 445 1.97E-19 T 14-10-2018 IPR036034 PDZ superfamily GO:0005515 GYO_1609 de6bf6540d575256fffb7e947017e9bc 453 Pfam PF13180 PDZ domain 346 445 8.6E-19 T 14-10-2018 IPR001478 PDZ domain GO:0005515 GYO_1609 de6bf6540d575256fffb7e947017e9bc 453 Gene3D G3DSA:2.40.10.10 229 346 1.0E-40 T 14-10-2018 GYO_1609 de6bf6540d575256fffb7e947017e9bc 453 SUPERFAMILY SSF50494 122 342 2.36E-57 T 14-10-2018 IPR009003 Peptidase S1, PA clan GYO_1609 de6bf6540d575256fffb7e947017e9bc 453 Pfam PF13365 Trypsin-like peptidase domain 164 308 6.8E-31 T 14-10-2018 GYO_1609 de6bf6540d575256fffb7e947017e9bc 453 Gene3D G3DSA:2.30.42.10 347 452 5.7E-25 T 14-10-2018 GYO_1609 de6bf6540d575256fffb7e947017e9bc 453 Gene3D G3DSA:2.40.10.10 107 227 1.6E-28 T 14-10-2018 GYO_2599 bcc2ab48800b7699b40d6da8f78d7235 306 SUPERFAMILY SSF51430 1 299 1.13E-79 T 14-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily GYO_2599 bcc2ab48800b7699b40d6da8f78d7235 306 PRINTS PR00069 Aldo-keto reductase signature 103 121 1.9E-7 T 14-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 GYO_2599 bcc2ab48800b7699b40d6da8f78d7235 306 PRINTS PR00069 Aldo-keto reductase signature 134 151 1.9E-7 T 14-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 GYO_2599 bcc2ab48800b7699b40d6da8f78d7235 306 PRINTS PR00069 Aldo-keto reductase signature 37 61 1.9E-7 T 14-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 GYO_2599 bcc2ab48800b7699b40d6da8f78d7235 306 Gene3D G3DSA:3.20.20.100 1 297 1.1E-105 T 14-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily GYO_2599 bcc2ab48800b7699b40d6da8f78d7235 306 Pfam PF00248 Aldo/keto reductase family 15 295 6.2E-64 T 14-10-2018 IPR023210 NADP-dependent oxidoreductase domain GYO_3749 b94ef4fbdede7b762933aa48ed4a5d33 330 Gene3D G3DSA:1.10.260.40 1 47 8.6E-19 T 14-10-2018 GYO_3749 b94ef4fbdede7b762933aa48ed4a5d33 330 Pfam PF00356 Bacterial regulatory proteins, lacI family 3 48 3.6E-16 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 GYO_3749 b94ef4fbdede7b762933aa48ed4a5d33 330 Gene3D G3DSA:3.40.50.2300 153 322 2.5E-43 T 14-10-2018 GYO_3749 b94ef4fbdede7b762933aa48ed4a5d33 330 SUPERFAMILY SSF53822 70 316 9.85E-41 T 14-10-2018 IPR028082 Periplasmic binding protein-like I GYO_3749 b94ef4fbdede7b762933aa48ed4a5d33 330 SMART SM00354 1 68 4.9E-10 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 GYO_3749 b94ef4fbdede7b762933aa48ed4a5d33 330 SUPERFAMILY SSF47413 3 51 1.83E-13 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 GYO_3749 b94ef4fbdede7b762933aa48ed4a5d33 330 Gene3D G3DSA:3.40.50.2300 98 321 2.5E-43 T 14-10-2018 GYO_3749 b94ef4fbdede7b762933aa48ed4a5d33 330 Pfam PF13377 Periplasmic binding protein-like domain 163 328 9.4E-41 T 14-10-2018 GYO_1189 6b58185c94ab96b7c822834feaa89266 218 Gene3D G3DSA:2.40.50.100 54 93 8.7E-6 T 14-10-2018 GYO_1189 6b58185c94ab96b7c822834feaa89266 218 SUPERFAMILY SSF51230 47 119 5.02E-11 T 14-10-2018 IPR011053 Single hybrid motif GYO_1189 6b58185c94ab96b7c822834feaa89266 218 Gene3D G3DSA:2.40.30.170 105 218 2.1E-34 T 14-10-2018 GYO_1189 6b58185c94ab96b7c822834feaa89266 218 Pfam PF13437 HlyD family secretion protein 93 209 7.8E-16 T 14-10-2018 GYO_4232 839f8c73925184e535fe268952463d97 395 SMART SM00359 2 87 1.2E-12 T 14-10-2018 IPR002478 PUA domain GO:0003723 GYO_4232 839f8c73925184e535fe268952463d97 395 Gene3D G3DSA:2.30.130.10 1 70 4.8E-27 T 14-10-2018 IPR036974 PUA domain superfamily GO:0003723 GYO_4232 839f8c73925184e535fe268952463d97 395 SUPERFAMILY SSF88697 1 71 2.42E-19 T 14-10-2018 IPR015947 PUA-like superfamily GYO_4232 839f8c73925184e535fe268952463d97 395 Gene3D G3DSA:3.40.50.150 180 395 1.1E-59 T 14-10-2018 GYO_4232 839f8c73925184e535fe268952463d97 395 Pfam PF10672 S-adenosylmethionine-dependent methyltransferase 102 378 3.3E-35 T 14-10-2018 IPR019614 S-adenosylmethionine-dependent methyltransferase GO:0008168 GYO_4232 839f8c73925184e535fe268952463d97 395 SUPERFAMILY SSF53335 79 392 3.38E-67 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase GYO_4232 839f8c73925184e535fe268952463d97 395 Gene3D G3DSA:3.30.750.80 71 178 5.9E-36 T 14-10-2018 GYO_0811 7d372e0492f5c9a97a1962f07f14ff15 400 SUPERFAMILY SSF103473 16 391 1.31E-56 T 14-10-2018 IPR036259 MFS transporter superfamily GYO_0811 7d372e0492f5c9a97a1962f07f14ff15 400 Pfam PF07690 Major Facilitator Superfamily 23 345 4.5E-38 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 GYO_0811 7d372e0492f5c9a97a1962f07f14ff15 400 Gene3D G3DSA:1.20.1250.20 10 384 1.2E-49 T 14-10-2018 GYO_0811 7d372e0492f5c9a97a1962f07f14ff15 400 ProSitePatterns PS00217 Sugar transport proteins signature 2. 113 138 - T 14-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 GYO_0024 c7206cd216499e9f27fb1789859e07c6 546 SUPERFAMILY SSF48019 228 344 3.15E-26 T 14-10-2018 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: R-HSA-110312|Reactome: R-HSA-110314|Reactome: R-HSA-110320|Reactome: R-HSA-174411|Reactome: R-HSA-5651801|Reactome: R-HSA-5655862|Reactome: R-HSA-5656121|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-69091 GYO_0024 c7206cd216499e9f27fb1789859e07c6 546 Gene3D G3DSA:1.10.8.60 161 216 1.1E-100 T 14-10-2018 GYO_0024 c7206cd216499e9f27fb1789859e07c6 546 Pfam PF12169 DNA polymerase III subunits gamma and tau domain III 223 345 2.7E-11 T 14-10-2018 IPR022754 DNA polymerase III, gamma subunit, domain III GO:0003887 GYO_0024 c7206cd216499e9f27fb1789859e07c6 546 SUPERFAMILY SSF52540 14 206 2.12E-58 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase GYO_0024 c7206cd216499e9f27fb1789859e07c6 546 TIGRFAM TIGR02397 dnaX_nterm: DNA polymerase III, subunit gamma and tau 1 341 1.5E-137 T 14-10-2018 IPR012763 DNA polymerase III, subunit gamma/ tau GO:0003887|GO:0005524|GO:0006260|GO:0009360 GYO_0024 c7206cd216499e9f27fb1789859e07c6 546 SMART SM00382 20 162 2.0E-10 T 14-10-2018 IPR003593 AAA+ ATPase domain GYO_0024 c7206cd216499e9f27fb1789859e07c6 546 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 107 125 3.3E-5 T 14-10-2018 IPR001270 ClpA/B family GO:0005524 GYO_0024 c7206cd216499e9f27fb1789859e07c6 546 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 24 42 3.3E-5 T 14-10-2018 IPR001270 ClpA/B family GO:0005524 GYO_0024 c7206cd216499e9f27fb1789859e07c6 546 Gene3D G3DSA:3.40.50.300 1 160 1.1E-100 T 14-10-2018 GYO_0024 c7206cd216499e9f27fb1789859e07c6 546 Pfam PF13177 DNA polymerase III, delta subunit 3 161 2.2E-45 T 14-10-2018 GYO_0024 c7206cd216499e9f27fb1789859e07c6 546 Gene3D G3DSA:1.20.272.10 225 346 5.1E-9 T 14-10-2018 GYO_4071 c7000d1f7de37a1a3c51d84e2be5b884 346 Pfam PF03481 Putative GTP-binding controlling metal-binding 205 341 5.6E-27 T 14-10-2018 IPR005145 Putative GTP-binding controlling metal-binding domain GYO_4071 c7000d1f7de37a1a3c51d84e2be5b884 346 PIRSF PIRSF004930 1 346 1.2E-132 T 14-10-2018 IPR010923 tRNA threonylcarbamoyladenosine biosynthesis protein SUA5 GYO_4071 c7000d1f7de37a1a3c51d84e2be5b884 346 TIGRFAM TIGR00057 TIGR00057: tRNA threonylcarbamoyl adenosine modification protein, Sua5/YciO/YrdC/YwlC family 15 213 1.7E-70 T 14-10-2018 IPR006070 YrdC-like domain GO:0003725 GYO_4071 c7000d1f7de37a1a3c51d84e2be5b884 346 SUPERFAMILY SSF55821 17 215 1.19E-66 T 14-10-2018 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily GYO_4071 c7000d1f7de37a1a3c51d84e2be5b884 346 Pfam PF01300 Telomere recombination 27 203 1.5E-57 T 14-10-2018 IPR006070 YrdC-like domain GO:0003725 GYO_4071 c7000d1f7de37a1a3c51d84e2be5b884 346 Gene3D G3DSA:3.90.870.10 8 219 1.4E-82 T 14-10-2018 GYO_4071 c7000d1f7de37a1a3c51d84e2be5b884 346 Gene3D G3DSA:3.40.50.11030 221 346 9.5E-39 T 14-10-2018 IPR038385 Threonylcarbamoyl-AMP synthase, C-terminal domain superfamily GYO_0359 d7452e6dbcfdfe478b9c13be99e69dd3 441 Hamap MF_01034 UPF0214 protein YfeW [yfeW]. 1 441 80.578 T 14-10-2018 IPR022849 Peptidase S12, UPF0214, YfeW-type GYO_0359 d7452e6dbcfdfe478b9c13be99e69dd3 441 SUPERFAMILY SSF56601 46 409 7.7E-77 T 14-10-2018 IPR012338 Beta-lactamase/transpeptidase-like GYO_0359 d7452e6dbcfdfe478b9c13be99e69dd3 441 Pfam PF00144 Beta-lactamase 53 421 5.8E-75 T 14-10-2018 IPR001466 Beta-lactamase-related GYO_0359 d7452e6dbcfdfe478b9c13be99e69dd3 441 Gene3D G3DSA:3.40.710.10 34 415 2.0E-85 T 14-10-2018 GYO_2359 51e7538979cfb873d2c70aa6a5823845 202 Gene3D G3DSA:3.40.109.10 1 202 2.9E-51 T 14-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 GYO_2359 51e7538979cfb873d2c70aa6a5823845 202 Pfam PF00881 Nitroreductase family 9 182 1.2E-28 T 14-10-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 GYO_2359 51e7538979cfb873d2c70aa6a5823845 202 SUPERFAMILY SSF55469 1 201 1.31E-52 T 14-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 GYO_3767 fe2eb09220bf10d2445776010af79442 278 SUPERFAMILY SSF53448 5 229 1.13E-56 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases GYO_3767 fe2eb09220bf10d2445776010af79442 278 Pfam PF00535 Glycosyl transferase family 2 8 160 1.9E-33 T 14-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 GYO_3767 fe2eb09220bf10d2445776010af79442 278 Gene3D G3DSA:3.90.550.10 1 244 2.2E-60 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases GYO_3215 69fb649df4f5a2de51f4c29f9ccceea8 422 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 44 66 1.1E-31 T 14-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 GYO_3215 69fb649df4f5a2de51f4c29f9ccceea8 422 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 183 205 1.1E-31 T 14-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 GYO_3215 69fb649df4f5a2de51f4c29f9ccceea8 422 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 218 230 1.1E-31 T 14-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 GYO_3215 69fb649df4f5a2de51f4c29f9ccceea8 422 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 162 177 1.1E-31 T 14-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 GYO_3215 69fb649df4f5a2de51f4c29f9ccceea8 422 Hamap MF_02006 Tyrosine--tRNA ligase [tyrS]. 2 421 46.757 T 14-10-2018 IPR024107 Tyrosine-tRNA ligase, bacterial-type, type 1 GO:0004831 KEGG: 00970+6.1.1.1 GYO_3215 69fb649df4f5a2de51f4c29f9ccceea8 422 Gene3D G3DSA:3.10.290.10 328 422 7.8E-35 T 14-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 GYO_3215 69fb649df4f5a2de51f4c29f9ccceea8 422 SUPERFAMILY SSF52374 2 325 1.28E-107 T 14-10-2018 GYO_3215 69fb649df4f5a2de51f4c29f9ccceea8 422 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 40 50 - T 14-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 GYO_3215 69fb649df4f5a2de51f4c29f9ccceea8 422 SMART SM00363 356 417 1.9E-14 T 14-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 GYO_3215 69fb649df4f5a2de51f4c29f9ccceea8 422 TIGRFAM TIGR00234 tyrS: tyrosine--tRNA ligase 1 421 2.9E-154 T 14-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 GYO_3215 69fb649df4f5a2de51f4c29f9ccceea8 422 Gene3D G3DSA:1.10.240.10 225 327 7.2E-42 T 14-10-2018 GYO_3215 69fb649df4f5a2de51f4c29f9ccceea8 422 Pfam PF01479 S4 domain 357 402 1.5E-11 T 14-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 GYO_3215 69fb649df4f5a2de51f4c29f9ccceea8 422 SUPERFAMILY SSF55174 323 421 1.57E-25 T 14-10-2018 GYO_3215 69fb649df4f5a2de51f4c29f9ccceea8 422 Pfam PF00579 tRNA synthetases class I (W and Y) 28 325 4.0E-93 T 14-10-2018 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 GYO_3215 69fb649df4f5a2de51f4c29f9ccceea8 422 Gene3D G3DSA:3.40.50.620 1 224 7.0E-91 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold GYO_0156 77cd3132b96620be43ae4291a96c0c79 132 Hamap MF_01302_B 30S ribosomal protein S8 [rpsH]. 2 132 33.294 T 14-10-2018 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 GYO_0156 77cd3132b96620be43ae4291a96c0c79 132 ProSitePatterns PS00053 Ribosomal protein S8 signature. 102 119 - T 14-10-2018 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 GYO_0156 77cd3132b96620be43ae4291a96c0c79 132 SUPERFAMILY SSF56047 2 132 1.57E-50 T 14-10-2018 IPR035987 Ribosomal protein S8 superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 GYO_0156 77cd3132b96620be43ae4291a96c0c79 132 Gene3D G3DSA:3.30.1490.10 75 132 5.5E-27 T 14-10-2018 GYO_0156 77cd3132b96620be43ae4291a96c0c79 132 Gene3D G3DSA:3.30.1370.30 4 74 2.6E-34 T 14-10-2018 GYO_0156 77cd3132b96620be43ae4291a96c0c79 132 Pfam PF00410 Ribosomal protein S8 5 132 1.5E-55 T 14-10-2018 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 GYO_4029 3a45714db6e78f499d48036529eb21cb 569 SUPERFAMILY SSF51338 425 479 1.47E-5 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 GYO_4029 3a45714db6e78f499d48036529eb21cb 569 PRINTS PR01752 Urea amidohydrolase (urease) protein signature 403 418 5.7E-32 T 14-10-2018 IPR005848 Urease, alpha subunit GO:0006807|GO:0009039|GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 GYO_4029 3a45714db6e78f499d48036529eb21cb 569 PRINTS PR01752 Urea amidohydrolase (urease) protein signature 429 442 5.7E-32 T 14-10-2018 IPR005848 Urease, alpha subunit GO:0006807|GO:0009039|GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 GYO_4029 3a45714db6e78f499d48036529eb21cb 569 PRINTS PR01752 Urea amidohydrolase (urease) protein signature 298 315 5.7E-32 T 14-10-2018 IPR005848 Urease, alpha subunit GO:0006807|GO:0009039|GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 GYO_4029 3a45714db6e78f499d48036529eb21cb 569 PRINTS PR01752 Urea amidohydrolase (urease) protein signature 337 353 5.7E-32 T 14-10-2018 IPR005848 Urease, alpha subunit GO:0006807|GO:0009039|GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 GYO_4029 3a45714db6e78f499d48036529eb21cb 569 SUPERFAMILY SSF51338 2 180 4.09E-65 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 GYO_4029 3a45714db6e78f499d48036529eb21cb 569 ProSitePatterns PS00145 Urease active site. 320 336 - T 14-10-2018 IPR017950 Urease active site GO:0009039 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 GYO_4029 3a45714db6e78f499d48036529eb21cb 569 ProSitePatterns PS01120 Urease nickel ligands signature. 130 143 - T 14-10-2018 IPR029754 Urease nickel binding site GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 GYO_4029 3a45714db6e78f499d48036529eb21cb 569 SUPERFAMILY SSF51556 133 569 1.02E-191 T 14-10-2018 IPR032466 Metal-dependent hydrolase GYO_4029 3a45714db6e78f499d48036529eb21cb 569 Pfam PF00449 Urease alpha-subunit, N-terminal domain 1 122 6.4E-57 T 14-10-2018 IPR011612 Urease alpha-subunit, N-terminal domain KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 GYO_4029 3a45714db6e78f499d48036529eb21cb 569 Gene3D G3DSA:2.30.40.10 2 482 4.7E-296 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 GYO_4029 3a45714db6e78f499d48036529eb21cb 569 Gene3D G3DSA:3.20.20.140 132 550 4.7E-296 T 14-10-2018 GYO_4029 3a45714db6e78f499d48036529eb21cb 569 TIGRFAM TIGR01792 urease_alph: urease, alpha subunit 2 569 2.1E-295 T 14-10-2018 IPR005848 Urease, alpha subunit GO:0006807|GO:0009039|GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 GYO_4029 3a45714db6e78f499d48036529eb21cb 569 Pfam PF01979 Amidohydrolase family 128 455 2.9E-76 T 14-10-2018 IPR006680 Amidohydrolase-related GO:0016787 GYO_4029 3a45714db6e78f499d48036529eb21cb 569 Hamap MF_01953 Urease subunit alpha [ureC]. 1 569 57.72 T 14-10-2018 IPR005848 Urease, alpha subunit GO:0006807|GO:0009039|GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 GYO_4517 6fa5069e3d49ce9e3ef5ad23e9d34964 459 Hamap MF_00379 tRNA modification GTPase MnmE [mnmE]. 2 459 34.379 T 14-10-2018 IPR004520 tRNA modification GTPase MnmE GO:0003924|GO:0005525|GO:0005622|GO:0006400 Reactome: R-HSA-6787450 GYO_4517 6fa5069e3d49ce9e3ef5ad23e9d34964 459 Pfam PF12631 MnmE helical domain 127 456 1.8E-59 T 14-10-2018 IPR025867 MnmE, helical domain Reactome: R-HSA-6787450 GYO_4517 6fa5069e3d49ce9e3ef5ad23e9d34964 459 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 225 373 3.5E-28 T 14-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 GYO_4517 6fa5069e3d49ce9e3ef5ad23e9d34964 459 PRINTS PR00449 Transforming protein P21 ras signature 222 243 8.6E-6 T 14-10-2018 GYO_4517 6fa5069e3d49ce9e3ef5ad23e9d34964 459 PRINTS PR00449 Transforming protein P21 ras signature 262 284 8.6E-6 T 14-10-2018 GYO_4517 6fa5069e3d49ce9e3ef5ad23e9d34964 459 PRINTS PR00449 Transforming protein P21 ras signature 326 339 8.6E-6 T 14-10-2018 GYO_4517 6fa5069e3d49ce9e3ef5ad23e9d34964 459 Pfam PF01926 50S ribosome-binding GTPase 225 336 2.3E-25 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 GYO_4517 6fa5069e3d49ce9e3ef5ad23e9d34964 459 Gene3D G3DSA:3.40.50.300 222 387 2.6E-108 T 14-10-2018 GYO_4517 6fa5069e3d49ce9e3ef5ad23e9d34964 459 TIGRFAM TIGR00450 mnmE_trmE_thdF: tRNA modification GTPase TrmE 9 459 2.6E-133 T 14-10-2018 IPR004520 tRNA modification GTPase MnmE GO:0003924|GO:0005525|GO:0005622|GO:0006400 Reactome: R-HSA-6787450 GYO_4517 6fa5069e3d49ce9e3ef5ad23e9d34964 459 SUPERFAMILY SSF116878 125 459 2.22E-50 T 14-10-2018 GYO_4517 6fa5069e3d49ce9e3ef5ad23e9d34964 459 Gene3D G3DSA:3.30.1360.120 1 124 4.4E-48 T 14-10-2018 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 GO:0005515 GYO_4517 6fa5069e3d49ce9e3ef5ad23e9d34964 459 SUPERFAMILY SSF52540 78 375 2.65E-47 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase GYO_4517 6fa5069e3d49ce9e3ef5ad23e9d34964 459 Gene3D G3DSA:1.20.120.430 125 459 2.6E-108 T 14-10-2018 IPR027368 tRNA modification GTPase MnmE domain 2 Reactome: R-HSA-6787450 GYO_4517 6fa5069e3d49ce9e3ef5ad23e9d34964 459 Pfam PF10396 GTP-binding protein TrmE N-terminus 3 124 3.5E-40 T 14-10-2018 IPR018948 GTP-binding protein TrmE, N-terminal Reactome: R-HSA-6787450 GYO_3225 4ae27100235b8d1c2cf4ffd5658d1d8d 151 Pfam PF12732 YtxH-like protein 12 93 3.8E-20 T 14-10-2018 IPR024623 Uncharacterised protein family YtxH GYO_2021 4e40ffdb0870a92ccf71f4d2a2271e3c 115 ProSitePatterns PS01319 Ribosome-binding factor A signature. 71 92 - T 14-10-2018 IPR020053 Ribosome-binding factor A, conserved site GO:0006364 GYO_2021 4e40ffdb0870a92ccf71f4d2a2271e3c 115 Hamap MF_00003 Ribosome-binding factor A [rbfA]. 1 105 29.592 T 14-10-2018 IPR000238 Ribosome-binding factor A GO:0006364 GYO_2021 4e40ffdb0870a92ccf71f4d2a2271e3c 115 Pfam PF02033 Ribosome-binding factor A 2 105 3.2E-35 T 14-10-2018 IPR000238 Ribosome-binding factor A GO:0006364 GYO_2021 4e40ffdb0870a92ccf71f4d2a2271e3c 115 SUPERFAMILY SSF89919 1 108 2.88E-36 T 14-10-2018 IPR023799 Ribosome-binding factor A domain superfamily GYO_2021 4e40ffdb0870a92ccf71f4d2a2271e3c 115 ProDom PD007327 FACTOR A RIBOSOME-BINDING PROCESSING RRNA 3D-STRUCTURE RIBOSOMAL-BINDING PRECURSOR A RBFA 5 92 4.0E-43 T 14-10-2018 IPR000238 Ribosome-binding factor A GO:0006364 GYO_2021 4e40ffdb0870a92ccf71f4d2a2271e3c 115 Gene3D G3DSA:3.30.300.20 1 114 7.6E-41 T 14-10-2018 IPR015946 K homology domain-like, alpha/beta GYO_2021 4e40ffdb0870a92ccf71f4d2a2271e3c 115 TIGRFAM TIGR00082 rbfA: ribosome-binding factor A 2 110 1.7E-44 T 14-10-2018 IPR000238 Ribosome-binding factor A GO:0006364 GYO_4451 bcf5fa4ef8d8066096aa7219367ad15e 280 Gene3D G3DSA:3.10.450.660 48 275 1.2E-73 T 14-10-2018 GYO_4451 bcf5fa4ef8d8066096aa7219367ad15e 280 Gene3D G3DSA:3.30.310.160 71 194 1.2E-73 T 14-10-2018 GYO_4451 bcf5fa4ef8d8066096aa7219367ad15e 280 Pfam PF09648 YycH protein 40 270 4.0E-61 T 14-10-2018 IPR018604 Regulatory protein YycH-like GO:0016021 GYO_1875 a9452dd9c6eee056504d21f11b93116a 382 Gene3D G3DSA:3.30.1330.20 221 330 4.9E-42 T 14-10-2018 IPR037103 Tubulin/FtsZ, C-terminal domain superfamily Reactome: R-HSA-380320 GYO_1875 a9452dd9c6eee056504d21f11b93116a 382 Pfam PF00091 Tubulin/FtsZ family, GTPase domain 13 173 1.1E-44 T 14-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 GYO_1875 a9452dd9c6eee056504d21f11b93116a 382 ProSitePatterns PS01134 FtsZ protein signature 1. 44 78 - T 14-10-2018 IPR020805 Cell division protein FtsZ, conserved site GO:0005525|GO:0005737 GYO_1875 a9452dd9c6eee056504d21f11b93116a 382 SUPERFAMILY SSF55307 204 315 4.35E-43 T 14-10-2018 IPR008280 Tubulin/FtsZ, C-terminal Reactome: R-HSA-380320 GYO_1875 a9452dd9c6eee056504d21f11b93116a 382 TIGRFAM TIGR00065 ftsZ: cell division protein FtsZ 11 343 9.9E-142 T 14-10-2018 IPR000158 Cell division protein FtsZ GO:0005525 GYO_1875 a9452dd9c6eee056504d21f11b93116a 382 ProSitePatterns PS01135 FtsZ protein signature 2. 97 118 - T 14-10-2018 IPR020805 Cell division protein FtsZ, conserved site GO:0005525|GO:0005737 GYO_1875 a9452dd9c6eee056504d21f11b93116a 382 SMART SM00865 207 324 2.7E-54 T 14-10-2018 IPR018316 Tubulin/FtsZ, 2-layer sandwich domain Reactome: R-HSA-380320 GYO_1875 a9452dd9c6eee056504d21f11b93116a 382 PRINTS PR00423 Cell division protein FtsZ signature 189 211 1.5E-52 T 14-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 GYO_1875 a9452dd9c6eee056504d21f11b93116a 382 PRINTS PR00423 Cell division protein FtsZ signature 98 118 1.5E-52 T 14-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 GYO_1875 a9452dd9c6eee056504d21f11b93116a 382 PRINTS PR00423 Cell division protein FtsZ signature 126 147 1.5E-52 T 14-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 GYO_1875 a9452dd9c6eee056504d21f11b93116a 382 PRINTS PR00423 Cell division protein FtsZ signature 212 233 1.5E-52 T 14-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 GYO_1875 a9452dd9c6eee056504d21f11b93116a 382 SUPERFAMILY SSF52490 13 208 7.33E-72 T 14-10-2018 IPR036525 Tubulin/FtsZ, GTPase domain superfamily Reactome: R-HSA-380320 GYO_1875 a9452dd9c6eee056504d21f11b93116a 382 Gene3D G3DSA:3.40.50.1440 8 220 1.4E-83 T 14-10-2018 IPR036525 Tubulin/FtsZ, GTPase domain superfamily Reactome: R-HSA-380320 GYO_1875 a9452dd9c6eee056504d21f11b93116a 382 Hamap MF_00909 Cell division protein FtsZ [ftsZ]. 9 358 39.18 T 14-10-2018 IPR000158 Cell division protein FtsZ GO:0005525 GYO_1875 a9452dd9c6eee056504d21f11b93116a 382 Pfam PF12327 FtsZ family, C-terminal domain 222 315 3.1E-32 T 14-10-2018 IPR024757 Cell division protein FtsZ, C-terminal GYO_1875 a9452dd9c6eee056504d21f11b93116a 382 SMART SM00864 13 205 1.0E-116 T 14-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 GYO_3334 6b12a5004a2fa078356dd3f6abcb8a4a 272 SUPERFAMILY SSF52096 5 267 7.83E-80 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily GYO_3334 6b12a5004a2fa078356dd3f6abcb8a4a 272 Pfam PF00378 Enoyl-CoA hydratase/isomerase 17 267 4.2E-94 T 14-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 GYO_3334 6b12a5004a2fa078356dd3f6abcb8a4a 272 Hamap MF_01934 1,4-dihydroxy-2-naphthoyl-CoA synthase [menB]. 5 271 55.862 T 14-10-2018 IPR010198 1,4-Dihydroxy-2-naphthoyl-CoA synthase, MenB GO:0008935|GO:0009234 KEGG: 00130+4.1.3.36|MetaCyc: PWY-5837 GYO_3334 6b12a5004a2fa078356dd3f6abcb8a4a 272 Gene3D G3DSA:1.10.12.10 210 260 2.8E-28 T 14-10-2018 IPR014748 Enoyl-CoA hydratase, C-terminal GYO_3334 6b12a5004a2fa078356dd3f6abcb8a4a 272 Gene3D G3DSA:3.90.226.10 1 209 1.1E-78 T 14-10-2018 GYO_3334 6b12a5004a2fa078356dd3f6abcb8a4a 272 TIGRFAM TIGR01929 menB: naphthoate synthase 11 268 2.2E-131 T 14-10-2018 IPR010198 1,4-Dihydroxy-2-naphthoyl-CoA synthase, MenB GO:0008935|GO:0009234 KEGG: 00130+4.1.3.36|MetaCyc: PWY-5837 GYO_3334 6b12a5004a2fa078356dd3f6abcb8a4a 272 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 110 130 - T 14-10-2018 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824 GYO_1447 e91c60c3d17b644f4e2f38f14fe15b83 545 Gene3D G3DSA:3.40.190.10 52 530 4.3E-175 T 14-10-2018 GYO_1447 e91c60c3d17b644f4e2f38f14fe15b83 545 Gene3D G3DSA:3.90.76.10 72 194 4.3E-175 T 14-10-2018 GYO_1447 e91c60c3d17b644f4e2f38f14fe15b83 545 ProSitePatterns PS01040 Bacterial extracellular solute-binding proteins, family 5 signature. 88 110 - T 14-10-2018 IPR023765 Solute-binding protein family 5, conserved site GYO_1447 e91c60c3d17b644f4e2f38f14fe15b83 545 Gene3D G3DSA:3.10.105.10 300 518 4.3E-175 T 14-10-2018 GYO_1447 e91c60c3d17b644f4e2f38f14fe15b83 545 PIRSF PIRSF002741 1 545 1.1E-160 T 14-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 GYO_1447 e91c60c3d17b644f4e2f38f14fe15b83 545 SUPERFAMILY SSF53850 35 542 2.64E-139 T 14-10-2018 GYO_1447 e91c60c3d17b644f4e2f38f14fe15b83 545 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 83 467 1.3E-91 T 14-10-2018 IPR000914 Solute-binding protein family 5 domain GYO_1751 0858fe0d2b0e6ee881dc2e0c45ac65aa 297 SUPERFAMILY SSF110296 12 284 8.37E-28 T 14-10-2018 GYO_1751 0858fe0d2b0e6ee881dc2e0c45ac65aa 297 Gene3D G3DSA:2.130.10.10 5 198 2.3E-7 T 14-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 GYO_2056 2193bdc27aafc2fbd7b133f8971e695f 509 ProSitePatterns PS01278 Methylthiotransferase radical SAM domain signature. 215 235 - T 14-10-2018 IPR020612 Methylthiotransferase, conserved site GO:0051539 GYO_2056 2193bdc27aafc2fbd7b133f8971e695f 509 Pfam PF04055 Radical SAM superfamily 215 386 4.8E-36 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 GYO_2056 2193bdc27aafc2fbd7b133f8971e695f 509 Pfam PF00919 Uncharacterized protein family UPF0004 67 168 1.7E-29 T 14-10-2018 IPR013848 Methylthiotransferase, N-terminal GO:0051539 GYO_2056 2193bdc27aafc2fbd7b133f8971e695f 509 Pfam PF01938 TRAM domain 441 502 5.2E-17 T 14-10-2018 IPR002792 TRAM domain GYO_2056 2193bdc27aafc2fbd7b133f8971e695f 509 Gene3D G3DSA:3.40.50.12160 66 201 2.6E-35 T 14-10-2018 IPR038135 Methylthiotransferase, N-terminal domain superfamily GYO_2056 2193bdc27aafc2fbd7b133f8971e695f 509 TIGRFAM TIGR01574 miaB-methiolase: tRNA-i(6)A37 thiotransferase enzyme MiaB 67 502 5.6E-225 T 14-10-2018 GYO_2056 2193bdc27aafc2fbd7b133f8971e695f 509 Hamap MF_01864 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase [miaB]. 66 503 75.159 T 14-10-2018 IPR006463 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase MiaB GO:0005737|GO:0006400|GO:0016740|GO:0051539 GYO_2056 2193bdc27aafc2fbd7b133f8971e695f 509 Gene3D G3DSA:3.80.30.20 210 443 6.6E-92 T 14-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe GYO_2056 2193bdc27aafc2fbd7b133f8971e695f 509 SMART SM00729 211 429 2.8E-65 T 14-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 GYO_2056 2193bdc27aafc2fbd7b133f8971e695f 509 SUPERFAMILY SSF102114 198 434 2.88E-64 T 14-10-2018 GYO_2056 2193bdc27aafc2fbd7b133f8971e695f 509 TIGRFAM TIGR00089 TIGR00089: radical SAM methylthiotransferase, MiaB/RimO family 67 499 1.3E-168 T 14-10-2018 IPR005839 Methylthiotransferase GO:0006400|GO:0016740|GO:0051539 GYO_1722 64b9191be70247c0803addc6874a82f3 281 SUPERFAMILY SSF50151 5 57 1.44E-15 T 14-10-2018 IPR036650 CAT RNA-binding domain superfamily GO:0003723 GYO_1722 64b9191be70247c0803addc6874a82f3 281 Gene3D G3DSA:1.20.890.100 170 225 3.3E-27 T 14-10-2018 GYO_1722 64b9191be70247c0803addc6874a82f3 281 Gene3D G3DSA:1.10.1790.10 71 169 3.7E-36 T 14-10-2018 GYO_1722 64b9191be70247c0803addc6874a82f3 281 Pfam PF00874 PRD domain 80 167 6.3E-26 T 14-10-2018 IPR011608 PRD domain GO:0006355 GYO_1722 64b9191be70247c0803addc6874a82f3 281 Pfam PF00874 PRD domain 185 275 8.4E-20 T 14-10-2018 IPR011608 PRD domain GO:0006355 GYO_1722 64b9191be70247c0803addc6874a82f3 281 Pfam PF03123 CAT RNA binding domain 6 61 7.3E-21 T 14-10-2018 IPR004341 CAT RNA-binding domain GO:0003723 GYO_1722 64b9191be70247c0803addc6874a82f3 281 ProSitePatterns PS00654 PRD domain signature. 102 114 - T 14-10-2018 IPR001550 Transcription antiterminator, conserved site GO:0003723|GO:0045893 GYO_1722 64b9191be70247c0803addc6874a82f3 281 SMART SM01061 5 63 6.8E-25 T 14-10-2018 IPR004341 CAT RNA-binding domain GO:0003723 GYO_1722 64b9191be70247c0803addc6874a82f3 281 SUPERFAMILY SSF63520 179 276 7.19E-23 T 14-10-2018 IPR036634 PRD domain superfamily GO:0006355 GYO_1722 64b9191be70247c0803addc6874a82f3 281 Gene3D G3DSA:1.20.58.1950 226 278 1.8E-26 T 14-10-2018 GYO_1722 64b9191be70247c0803addc6874a82f3 281 Gene3D G3DSA:2.30.24.10 1 70 1.7E-28 T 14-10-2018 IPR036650 CAT RNA-binding domain superfamily GO:0003723 GYO_1722 64b9191be70247c0803addc6874a82f3 281 SUPERFAMILY SSF63520 59 170 1.57E-31 T 14-10-2018 IPR036634 PRD domain superfamily GO:0006355 GYO_2201 8e27a1187ace4d19b3ba5d14b7399775 5365 Pfam PF00501 AMP-binding enzyme 4339 4734 7.5E-92 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 GYO_2201 8e27a1187ace4d19b3ba5d14b7399775 5365 Pfam PF00501 AMP-binding enzyme 1779 2173 2.5E-101 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 GYO_2201 8e27a1187ace4d19b3ba5d14b7399775 5365 Pfam PF00501 AMP-binding enzyme 3290 3694 5.3E-99 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 GYO_2201 8e27a1187ace4d19b3ba5d14b7399775 5365 Pfam PF00501 AMP-binding enzyme 269 662 4.1E-105 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 GYO_2201 8e27a1187ace4d19b3ba5d14b7399775 5365 SUPERFAMILY SSF52777 1032 1281 2.33E-38 T 14-10-2018 GYO_2201 8e27a1187ace4d19b3ba5d14b7399775 5365 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 290 686 1.1E-135 T 14-10-2018 IPR010071 Amino acid adenylation domain GYO_2201 8e27a1187ace4d19b3ba5d14b7399775 5365 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 3311 3719 1.1E-126 T 14-10-2018 IPR010071 Amino acid adenylation domain GYO_2201 8e27a1187ace4d19b3ba5d14b7399775 5365 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 1800 2197 2.4E-140 T 14-10-2018 IPR010071 Amino acid adenylation domain GYO_2201 8e27a1187ace4d19b3ba5d14b7399775 5365 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 4360 4758 2.9E-128 T 14-10-2018 IPR010071 Amino acid adenylation domain GYO_2201 8e27a1187ace4d19b3ba5d14b7399775 5365 Pfam PF00668 Condensation domain 2358 2802 4.6E-106 T 14-10-2018 IPR001242 Condensation domain GYO_2201 8e27a1187ace4d19b3ba5d14b7399775 5365 Pfam PF00668 Condensation domain 1316 1760 1.4E-121 T 14-10-2018 IPR001242 Condensation domain GYO_2201 8e27a1187ace4d19b3ba5d14b7399775 5365 Pfam PF00668 Condensation domain 4924 5354 6.3E-121 T 14-10-2018 IPR001242 Condensation domain GYO_2201 8e27a1187ace4d19b3ba5d14b7399775 5365 Pfam PF00668 Condensation domain 3887 4317 3.8E-130 T 14-10-2018 IPR001242 Condensation domain GYO_2201 8e27a1187ace4d19b3ba5d14b7399775 5365 Pfam PF00668 Condensation domain 2827 3270 7.7E-121 T 14-10-2018 IPR001242 Condensation domain GYO_2201 8e27a1187ace4d19b3ba5d14b7399775 5365 Pfam PF00668 Condensation domain 4 249 2.9E-18 T 14-10-2018 IPR001242 Condensation domain GYO_2201 8e27a1187ace4d19b3ba5d14b7399775 5365 Pfam PF00668 Condensation domain 848 1291 3.3E-103 T 14-10-2018 IPR001242 Condensation domain GYO_2201 8e27a1187ace4d19b3ba5d14b7399775 5365 Gene3D G3DSA:3.30.300.30 3689 3791 7.3E-29 T 14-10-2018 GYO_2201 8e27a1187ace4d19b3ba5d14b7399775 5365 Gene3D G3DSA:3.30.300.30 656 759 9.5E-31 T 14-10-2018 GYO_2201 8e27a1187ace4d19b3ba5d14b7399775 5365 Gene3D G3DSA:3.30.300.30 4729 4830 1.1E-29 T 14-10-2018 GYO_2201 8e27a1187ace4d19b3ba5d14b7399775 5365 ProSitePatterns PS00455 Putative AMP-binding domain signature. 4478 4489 - T 14-10-2018 IPR020845 AMP-binding, conserved site GYO_2201 8e27a1187ace4d19b3ba5d14b7399775 5365 Gene3D G3DSA:3.30.300.30 2168 2269 2.5E-32 T 14-10-2018 GYO_2201 8e27a1187ace4d19b3ba5d14b7399775 5365 Gene3D G3DSA:3.30.559.10 2349 2527 4.3E-58 T 14-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 GYO_2201 8e27a1187ace4d19b3ba5d14b7399775 5365 Gene3D G3DSA:3.30.559.10 837 1016 9.2E-58 T 14-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 GYO_2201 8e27a1187ace4d19b3ba5d14b7399775 5365 Gene3D G3DSA:3.40.50.12780 1765 2167 1.6E-132 T 14-10-2018 GYO_2201 8e27a1187ace4d19b3ba5d14b7399775 5365 Gene3D G3DSA:3.40.50.12780 4324 4728 1.7E-126 T 14-10-2018 GYO_2201 8e27a1187ace4d19b3ba5d14b7399775 5365 SUPERFAMILY SSF56801 1738 2293 2.88E-156 T 14-10-2018 GYO_2201 8e27a1187ace4d19b3ba5d14b7399775 5365 Gene3D G3DSA:3.30.559.10 3889 4247 1.5E-149 T 14-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 GYO_2201 8e27a1187ace4d19b3ba5d14b7399775 5365 SUPERFAMILY SSF52777 852 1026 7.34E-34 T 14-10-2018 GYO_2201 8e27a1187ace4d19b3ba5d14b7399775 5365 Gene3D G3DSA:3.30.559.30 3011 3266 2.5E-134 T 14-10-2018 GYO_2201 8e27a1187ace4d19b3ba5d14b7399775 5365 ProSitePatterns PS00012 Phosphopantetheine attachment site. 2305 2320 - T 14-10-2018 IPR006162 Phosphopantetheine attachment site GYO_2201 8e27a1187ace4d19b3ba5d14b7399775 5365 SUPERFAMILY SSF47336 762 834 2.22E-17 T 14-10-2018 IPR036736 ACP-like superfamily GYO_2201 8e27a1187ace4d19b3ba5d14b7399775 5365 Gene3D G3DSA:3.30.559.10 2832 3201 2.5E-134 T 14-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 GYO_2201 8e27a1187ace4d19b3ba5d14b7399775 5365 SUPERFAMILY SSF52777 5098 5343 4.78E-56 T 14-10-2018 GYO_2201 8e27a1187ace4d19b3ba5d14b7399775 5365 SUPERFAMILY SSF52777 1499 1766 7.56E-51 T 14-10-2018 GYO_2201 8e27a1187ace4d19b3ba5d14b7399775 5365 Pfam PF00550 Phosphopantetheine attachment site 4843 4906 9.6E-14 T 14-10-2018 IPR009081 Phosphopantetheine binding ACP domain GYO_2201 8e27a1187ace4d19b3ba5d14b7399775 5365 Pfam PF00550 Phosphopantetheine attachment site 2283 2345 5.2E-9 T 14-10-2018 IPR009081 Phosphopantetheine binding ACP domain GYO_2201 8e27a1187ace4d19b3ba5d14b7399775 5365 Pfam PF00550 Phosphopantetheine attachment site 772 831 7.2E-10 T 14-10-2018 IPR009081 Phosphopantetheine binding ACP domain GYO_2201 8e27a1187ace4d19b3ba5d14b7399775 5365 Pfam PF00550 Phosphopantetheine attachment site 3805 3868 9.9E-15 T 14-10-2018 IPR009081 Phosphopantetheine binding ACP domain GYO_2201 8e27a1187ace4d19b3ba5d14b7399775 5365 Pfam PF13193 AMP-binding enzyme C-terminal domain 4742 4815 3.3E-8 T 14-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain GYO_2201 8e27a1187ace4d19b3ba5d14b7399775 5365 Pfam PF13193 AMP-binding enzyme C-terminal domain 670 743 1.0E-7 T 14-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain GYO_2201 8e27a1187ace4d19b3ba5d14b7399775 5365 Pfam PF13193 AMP-binding enzyme C-terminal domain 3703 3776 2.9E-7 T 14-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain GYO_2201 8e27a1187ace4d19b3ba5d14b7399775 5365 Pfam PF13193 AMP-binding enzyme C-terminal domain 2181 2254 2.2E-7 T 14-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain GYO_2201 8e27a1187ace4d19b3ba5d14b7399775 5365 Gene3D G3DSA:3.40.50.12780 259 654 2.5E-133 T 14-10-2018 GYO_2201 8e27a1187ace4d19b3ba5d14b7399775 5365 Gene3D G3DSA:3.30.559.30 1499 1756 1.1E-136 T 14-10-2018 GYO_2201 8e27a1187ace4d19b3ba5d14b7399775 5365 Gene3D G3DSA:3.30.559.30 2528 2798 1.5E-71 T 14-10-2018 GYO_2201 8e27a1187ace4d19b3ba5d14b7399775 5365 Gene3D G3DSA:3.30.559.30 1017 1286 1.6E-71 T 14-10-2018 GYO_2201 8e27a1187ace4d19b3ba5d14b7399775 5365 SUPERFAMILY SSF52777 2354 2532 7.56E-35 T 14-10-2018 GYO_2201 8e27a1187ace4d19b3ba5d14b7399775 5365 SUPERFAMILY SSF52777 2832 3009 9.67E-42 T 14-10-2018 GYO_2201 8e27a1187ace4d19b3ba5d14b7399775 5365 SUPERFAMILY SSF47336 3795 3868 1.2E-18 T 14-10-2018 IPR036736 ACP-like superfamily GYO_2201 8e27a1187ace4d19b3ba5d14b7399775 5365 SUPERFAMILY SSF52777 1313 1513 3.11E-43 T 14-10-2018 GYO_2201 8e27a1187ace4d19b3ba5d14b7399775 5365 Gene3D G3DSA:3.30.559.30 5096 5341 9.8E-143 T 14-10-2018 GYO_2201 8e27a1187ace4d19b3ba5d14b7399775 5365 ProSitePatterns PS00012 Phosphopantetheine attachment site. 3827 3842 - T 14-10-2018 IPR006162 Phosphopantetheine attachment site GYO_2201 8e27a1187ace4d19b3ba5d14b7399775 5365 SUPERFAMILY SSF52777 3010 3273 1.78E-52 T 14-10-2018 GYO_2201 8e27a1187ace4d19b3ba5d14b7399775 5365 SMART SM00823 Phosphopantetheine attachment site 4845 4911 0.023 T 14-10-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 GYO_2201 8e27a1187ace4d19b3ba5d14b7399775 5365 SMART SM00823 Phosphopantetheine attachment site 2281 2349 0.0054 T 14-10-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 GYO_2201 8e27a1187ace4d19b3ba5d14b7399775 5365 SMART SM00823 Phosphopantetheine attachment site 3803 3872 0.017 T 14-10-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 GYO_2201 8e27a1187ace4d19b3ba5d14b7399775 5365 SMART SM00823 Phosphopantetheine attachment site 770 838 0.14 T 14-10-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 GYO_2201 8e27a1187ace4d19b3ba5d14b7399775 5365 ProSitePatterns PS00455 Putative AMP-binding domain signature. 408 419 - T 14-10-2018 IPR020845 AMP-binding, conserved site GYO_2201 8e27a1187ace4d19b3ba5d14b7399775 5365 SUPERFAMILY SSF52777 4059 4301 3.0E-63 T 14-10-2018 GYO_2201 8e27a1187ace4d19b3ba5d14b7399775 5365 Gene3D G3DSA:3.30.559.30 5 256 1.2E-21 T 14-10-2018 GYO_2201 8e27a1187ace4d19b3ba5d14b7399775 5365 Gene3D G3DSA:3.30.559.10 4928 5286 9.8E-143 T 14-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 GYO_2201 8e27a1187ace4d19b3ba5d14b7399775 5365 SUPERFAMILY SSF56801 4296 4855 5.89E-144 T 14-10-2018 GYO_2201 8e27a1187ace4d19b3ba5d14b7399775 5365 ProSitePatterns PS00012 Phosphopantetheine attachment site. 794 809 - T 14-10-2018 IPR006162 Phosphopantetheine attachment site GYO_2201 8e27a1187ace4d19b3ba5d14b7399775 5365 SUPERFAMILY SSF47336 2274 2346 2.49E-16 T 14-10-2018 IPR036736 ACP-like superfamily GYO_2201 8e27a1187ace4d19b3ba5d14b7399775 5365 ProSitePatterns PS00012 Phosphopantetheine attachment site. 4866 4881 - T 14-10-2018 IPR006162 Phosphopantetheine attachment site GYO_2201 8e27a1187ace4d19b3ba5d14b7399775 5365 SUPERFAMILY SSF56801 3247 3814 6.15E-149 T 14-10-2018 GYO_2201 8e27a1187ace4d19b3ba5d14b7399775 5365 SUPERFAMILY SSF52777 3887 4071 1.78E-40 T 14-10-2018 GYO_2201 8e27a1187ace4d19b3ba5d14b7399775 5365 Gene3D G3DSA:3.30.559.10 1321 1691 1.1E-136 T 14-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 GYO_2201 8e27a1187ace4d19b3ba5d14b7399775 5365 SUPERFAMILY SSF47336 4834 4908 1.7E-18 T 14-10-2018 IPR036736 ACP-like superfamily GYO_2201 8e27a1187ace4d19b3ba5d14b7399775 5365 SUPERFAMILY SSF52777 5 254 6.34E-20 T 14-10-2018 GYO_2201 8e27a1187ace4d19b3ba5d14b7399775 5365 TIGRFAM TIGR01720 NRPS-para261: non-ribosomal peptide synthase domain TIGR01720 2665 2816 3.2E-52 T 14-10-2018 IPR010060 Non-ribosomal peptide synthase GYO_2201 8e27a1187ace4d19b3ba5d14b7399775 5365 TIGRFAM TIGR01720 NRPS-para261: non-ribosomal peptide synthase domain TIGR01720 1153 1305 6.4E-45 T 14-10-2018 IPR010060 Non-ribosomal peptide synthase GYO_2201 8e27a1187ace4d19b3ba5d14b7399775 5365 Gene3D G3DSA:1.10.1200.10 4831 4912 1.4E-24 T 14-10-2018 IPR036736 ACP-like superfamily GYO_2201 8e27a1187ace4d19b3ba5d14b7399775 5365 Gene3D G3DSA:1.10.1200.10 760 836 9.5E-21 T 14-10-2018 IPR036736 ACP-like superfamily GYO_2201 8e27a1187ace4d19b3ba5d14b7399775 5365 Gene3D G3DSA:1.10.1200.10 3792 3875 8.6E-26 T 14-10-2018 IPR036736 ACP-like superfamily GYO_2201 8e27a1187ace4d19b3ba5d14b7399775 5365 Gene3D G3DSA:1.10.1200.10 2270 2348 1.5E-20 T 14-10-2018 IPR036736 ACP-like superfamily GYO_2201 8e27a1187ace4d19b3ba5d14b7399775 5365 SUPERFAMILY SSF52777 4922 5093 2.67E-42 T 14-10-2018 GYO_2201 8e27a1187ace4d19b3ba5d14b7399775 5365 Gene3D G3DSA:3.30.559.30 4057 4303 1.5E-149 T 14-10-2018 GYO_2201 8e27a1187ace4d19b3ba5d14b7399775 5365 Gene3D G3DSA:3.40.50.12780 3282 3688 2.8E-128 T 14-10-2018 GYO_2201 8e27a1187ace4d19b3ba5d14b7399775 5365 SUPERFAMILY SSF52777 2545 2792 7.56E-41 T 14-10-2018 GYO_2201 8e27a1187ace4d19b3ba5d14b7399775 5365 SUPERFAMILY SSF56801 230 782 1.83E-159 T 14-10-2018 GYO_2201 8e27a1187ace4d19b3ba5d14b7399775 5365 ProSitePatterns PS00455 Putative AMP-binding domain signature. 1918 1929 - T 14-10-2018 IPR020845 AMP-binding, conserved site GYO_1225 30941b4ddefe877e03998c891218ec41 478 Pfam PF01476 LysM domain 30 71 5.0E-14 T 14-10-2018 IPR018392 LysM domain GYO_1225 30941b4ddefe877e03998c891218ec41 478 Pfam PF01476 LysM domain 297 338 1.0E-15 T 14-10-2018 IPR018392 LysM domain GYO_1225 30941b4ddefe877e03998c891218ec41 478 Pfam PF01476 LysM domain 231 272 1.3E-16 T 14-10-2018 IPR018392 LysM domain GYO_1225 30941b4ddefe877e03998c891218ec41 478 Pfam PF01476 LysM domain 165 205 1.5E-12 T 14-10-2018 IPR018392 LysM domain GYO_1225 30941b4ddefe877e03998c891218ec41 478 Pfam PF01476 LysM domain 93 134 2.2E-16 T 14-10-2018 IPR018392 LysM domain GYO_1225 30941b4ddefe877e03998c891218ec41 478 SUPERFAMILY SSF54106 229 272 1.96E-12 T 14-10-2018 GYO_1225 30941b4ddefe877e03998c891218ec41 478 SMART SM00257 92 135 1.6E-18 T 14-10-2018 IPR018392 LysM domain GYO_1225 30941b4ddefe877e03998c891218ec41 478 SMART SM00257 296 339 2.9E-18 T 14-10-2018 IPR018392 LysM domain GYO_1225 30941b4ddefe877e03998c891218ec41 478 SMART SM00257 164 207 1.0E-14 T 14-10-2018 IPR018392 LysM domain GYO_1225 30941b4ddefe877e03998c891218ec41 478 SMART SM00257 28 71 1.1E-16 T 14-10-2018 IPR018392 LysM domain GYO_1225 30941b4ddefe877e03998c891218ec41 478 SMART SM00257 230 273 5.7E-17 T 14-10-2018 IPR018392 LysM domain GYO_1225 30941b4ddefe877e03998c891218ec41 478 Gene3D G3DSA:3.90.1720.10 355 478 8.5E-36 T 14-10-2018 GYO_1225 30941b4ddefe877e03998c891218ec41 478 Gene3D G3DSA:3.10.350.10 279 354 1.7E-19 T 14-10-2018 IPR036779 LysM domain superfamily GYO_1225 30941b4ddefe877e03998c891218ec41 478 Gene3D G3DSA:3.10.350.10 15 80 1.5E-15 T 14-10-2018 IPR036779 LysM domain superfamily GYO_1225 30941b4ddefe877e03998c891218ec41 478 SUPERFAMILY SSF54001 357 477 1.23E-36 T 14-10-2018 IPR038765 Papain-like cysteine peptidase superfamily GYO_1225 30941b4ddefe877e03998c891218ec41 478 Pfam PF00877 NlpC/P60 family 375 475 1.6E-28 T 14-10-2018 IPR000064 Endopeptidase, NLPC/P60 domain GYO_1225 30941b4ddefe877e03998c891218ec41 478 SUPERFAMILY SSF54106 164 205 1.44E-9 T 14-10-2018 GYO_1225 30941b4ddefe877e03998c891218ec41 478 Gene3D G3DSA:3.10.350.10 160 215 4.7E-16 T 14-10-2018 IPR036779 LysM domain superfamily GYO_1225 30941b4ddefe877e03998c891218ec41 478 Gene3D G3DSA:3.10.350.10 89 141 1.0E-19 T 14-10-2018 IPR036779 LysM domain superfamily GYO_1225 30941b4ddefe877e03998c891218ec41 478 Gene3D G3DSA:3.10.350.10 226 278 1.8E-18 T 14-10-2018 IPR036779 LysM domain superfamily GYO_1225 30941b4ddefe877e03998c891218ec41 478 SUPERFAMILY SSF54106 27 71 8.11E-10 T 14-10-2018 GYO_1225 30941b4ddefe877e03998c891218ec41 478 SUPERFAMILY SSF54106 295 338 1.44E-12 T 14-10-2018 GYO_1225 30941b4ddefe877e03998c891218ec41 478 SUPERFAMILY SSF54106 92 134 6.67E-12 T 14-10-2018 GYO_2472 3a8e720270d6d47c538f8b420c76034f 397 Gene3D G3DSA:3.30.460.10 2 144 2.4E-52 T 14-10-2018 GYO_2472 3a8e720270d6d47c538f8b420c76034f 397 Pfam PF01743 Poly A polymerase head domain 22 142 2.2E-40 T 14-10-2018 IPR002646 Poly A polymerase, head domain GO:0003723|GO:0006396|GO:0016779 Reactome: R-HSA-6784531|Reactome: R-HSA-6785470 GYO_2472 3a8e720270d6d47c538f8b420c76034f 397 Gene3D G3DSA:1.20.58.560 242 338 1.4E-12 T 14-10-2018 GYO_2472 3a8e720270d6d47c538f8b420c76034f 397 SUPERFAMILY SSF81301 4 139 2.29E-41 T 14-10-2018 GYO_2472 3a8e720270d6d47c538f8b420c76034f 397 Gene3D G3DSA:1.10.110.30 145 240 2.6E-29 T 14-10-2018 GYO_2472 3a8e720270d6d47c538f8b420c76034f 397 Pfam PF12627 Probable RNA and SrmB- binding site of polymerase A 169 226 1.0E-13 T 14-10-2018 IPR032828 tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain Reactome: R-HSA-6784531|Reactome: R-HSA-6785470 GYO_2472 3a8e720270d6d47c538f8b420c76034f 397 SUPERFAMILY SSF81891 140 393 4.71E-52 T 14-10-2018 GYO_2472 3a8e720270d6d47c538f8b420c76034f 397 Hamap MF_01263 CCA-adding enzyme [cca]. 2 395 41.465 T 14-10-2018 IPR023068 CCA-adding enzyme, firmicutes GO:0001680|GO:0004810|GO:0016437 GYO_2472 3a8e720270d6d47c538f8b420c76034f 397 Pfam PF13735 tRNA nucleotidyltransferase domain 2 putative 244 390 2.5E-36 T 14-10-2018 IPR032810 CCA-adding enzyme, C-terminal GYO_2472 3a8e720270d6d47c538f8b420c76034f 397 Gene3D G3DSA:1.10.246.80 339 397 1.1E-18 T 14-10-2018 GYO_1416 5170f7745b58c25400117356582bcae6 270 Gene3D G3DSA:3.40.50.1000 8 264 1.2E-65 T 14-10-2018 IPR023214 HAD superfamily GYO_1416 5170f7745b58c25400117356582bcae6 270 Pfam PF08282 haloacid dehalogenase-like hydrolase 8 264 5.3E-67 T 14-10-2018 GYO_1416 5170f7745b58c25400117356582bcae6 270 Gene3D G3DSA:3.30.1240.10 87 193 1.2E-65 T 14-10-2018 GYO_1416 5170f7745b58c25400117356582bcae6 270 TIGRFAM TIGR00099 Cof-subfamily: Cof-like hydrolase 7 264 2.9E-61 T 14-10-2018 IPR000150 Cof family GO:0016787 GYO_1416 5170f7745b58c25400117356582bcae6 270 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 7 237 1.9E-25 T 14-10-2018 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: R-HSA-446205 GYO_1416 5170f7745b58c25400117356582bcae6 270 SUPERFAMILY SSF56784 4 268 5.51E-70 T 14-10-2018 IPR036412 HAD-like superfamily GYO_2092 27fc342ed98da0ecfbdfd7dadf4d23d7 73 Pfam PF17209 Hfq protein 6 68 1.2E-33 T 14-10-2018 IPR005001 RNA-binding protein Hfq GO:0003723|GO:0006355 GYO_2092 27fc342ed98da0ecfbdfd7dadf4d23d7 73 Hamap MF_00436 RNA-binding protein Hfq [hfq]. 2 64 29.862 T 14-10-2018 IPR005001 RNA-binding protein Hfq GO:0003723|GO:0006355 GYO_2092 27fc342ed98da0ecfbdfd7dadf4d23d7 73 Gene3D G3DSA:2.30.30.100 1 73 2.3E-36 T 14-10-2018 GYO_2092 27fc342ed98da0ecfbdfd7dadf4d23d7 73 SUPERFAMILY SSF50182 5 63 1.78E-24 T 14-10-2018 IPR010920 LSM domain superfamily GYO_2092 27fc342ed98da0ecfbdfd7dadf4d23d7 73 TIGRFAM TIGR02383 Hfq: RNA chaperone Hfq 5 64 7.3E-33 T 14-10-2018 IPR005001 RNA-binding protein Hfq GO:0003723|GO:0006355 GYO_2395 d1299f9850fb9fbce7e15dbc51eaf87d 64 ProDom PD054146 YPMT TRANSMEMBRANE MEMBRANE 1 62 1.0E-20 T 14-10-2018 IPR035403 Uncharacterized protein YmpT GYO_2395 d1299f9850fb9fbce7e15dbc51eaf87d 64 Pfam PF17431 Uncharacterized ympT 1 62 3.3E-40 T 14-10-2018 IPR035403 Uncharacterized protein YmpT GYO_3866 f6572aaa1abaf2b3ca61c7f467704c97 228 SUPERFAMILY SSF52540 1 223 1.82E-71 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase GYO_3866 f6572aaa1abaf2b3ca61c7f467704c97 228 SMART SM00382 27 221 1.6E-12 T 14-10-2018 IPR003593 AAA+ ATPase domain GYO_3866 f6572aaa1abaf2b3ca61c7f467704c97 228 Gene3D G3DSA:3.40.50.300 1 226 1.1E-68 T 14-10-2018 GYO_3866 f6572aaa1abaf2b3ca61c7f467704c97 228 Pfam PF00005 ABC transporter 18 165 1.4E-38 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 GYO_3866 f6572aaa1abaf2b3ca61c7f467704c97 228 ProSitePatterns PS00211 ABC transporters family signature. 138 152 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 GYO_3866 f6572aaa1abaf2b3ca61c7f467704c97 228 TIGRFAM TIGR02673 FtsE: cell division ATP-binding protein FtsE 1 213 2.0E-90 T 14-10-2018 IPR005286 Cell division protein FtsE, ATP-binding GO:0005524|GO:0051301 GYO_4155 dc65d49675721d44580d30b496895639 399 Gene3D G3DSA:3.90.1150.10 26 384 9.3E-114 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 GYO_4155 dc65d49675721d44580d30b496895639 399 SUPERFAMILY SSF53383 5 387 7.61E-105 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase GYO_4155 dc65d49675721d44580d30b496895639 399 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 236 249 - T 14-10-2018 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 GYO_4155 dc65d49675721d44580d30b496895639 399 Gene3D G3DSA:3.40.640.10 44 284 9.3E-114 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 GYO_4155 dc65d49675721d44580d30b496895639 399 Pfam PF00155 Aminotransferase class I and II 33 384 5.5E-77 T 14-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 GYO_0303 f672813e2428244a5e4fa40ae3acb74c 510 Pfam PF04860 Phage portal protein 126 449 4.7E-14 T 14-10-2018 IPR006944 Bacteriophage/Gene transfer agent portal protein GYO_0303 f672813e2428244a5e4fa40ae3acb74c 510 PIRSF PIRSF019260 6 510 1.1E-175 T 14-10-2018 IPR016753 Phage portal protein PBSX family, Firmicutes GYO_0303 f672813e2428244a5e4fa40ae3acb74c 510 TIGRFAM TIGR01540 portal_PBSX: phage portal protein, PBSX family 36 408 1.5E-117 T 14-10-2018 IPR006430 Phage portal protein PBSX family GYO_0224 f672813e2428244a5e4fa40ae3acb74c 510 Pfam PF04860 Phage portal protein 126 449 4.7E-14 T 14-10-2018 IPR006944 Bacteriophage/Gene transfer agent portal protein GYO_0224 f672813e2428244a5e4fa40ae3acb74c 510 PIRSF PIRSF019260 6 510 1.1E-175 T 14-10-2018 IPR016753 Phage portal protein PBSX family, Firmicutes GYO_0224 f672813e2428244a5e4fa40ae3acb74c 510 TIGRFAM TIGR01540 portal_PBSX: phage portal protein, PBSX family 36 408 1.5E-117 T 14-10-2018 IPR006430 Phage portal protein PBSX family GYO_2336 9f12a03628971d58df899fb938691527 445 Pfam PF00209 Sodium:neurotransmitter symporter family 148 441 1.9E-27 T 14-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 GYO_2336 9f12a03628971d58df899fb938691527 445 Pfam PF00209 Sodium:neurotransmitter symporter family 5 124 3.2E-26 T 14-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 GYO_2336 9f12a03628971d58df899fb938691527 445 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 87 113 6.6E-14 T 14-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 GYO_2336 9f12a03628971d58df899fb938691527 445 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 41 60 6.6E-14 T 14-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 GYO_2336 9f12a03628971d58df899fb938691527 445 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 12 33 6.6E-14 T 14-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 GYO_2336 9f12a03628971d58df899fb938691527 445 ProSitePatterns PS00610 Sodium:neurotransmitter symporter family signature 1. 28 42 - T 14-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 GYO_2336 9f12a03628971d58df899fb938691527 445 SUPERFAMILY SSF161070 5 442 6.54E-128 T 14-10-2018 IPR037272 Sodium:neurotransmitter symporter superfamily GO:0005328 GYO_3554 94e73d42fa95f3482367462166cc19b5 288 Pfam PF04231 Endonuclease I 72 281 1.2E-43 T 14-10-2018 IPR007346 Endonuclease I GO:0004518 GYO_3554 94e73d42fa95f3482367462166cc19b5 288 SUPERFAMILY SSF54060 69 281 2.47E-61 T 14-10-2018 GYO_2474 d4e93007cd3675d4ddaf1d502b4e2cdc 236 Gene3D G3DSA:3.40.50.10320 1 236 1.5E-85 T 14-10-2018 IPR024078 Putative deacetylase LmbE-like domain superfamily Reactome: R-HSA-162710 GYO_2474 d4e93007cd3675d4ddaf1d502b4e2cdc 236 Pfam PF02585 GlcNAc-PI de-N-acetylase 7 123 1.2E-22 T 14-10-2018 IPR003737 N-acetylglucosaminyl phosphatidylinositol deacetylase-related Reactome: R-HSA-162710 GYO_2474 d4e93007cd3675d4ddaf1d502b4e2cdc 236 TIGRFAM TIGR04001 thiol_BshB1: bacillithiol biosynthesis deacetylase BshB1 4 226 1.2E-99 T 14-10-2018 IPR023842 Bacillithiol biosynthesis deacetylase, BshB1 GO:0019213|GO:0071793 GYO_2474 d4e93007cd3675d4ddaf1d502b4e2cdc 236 SUPERFAMILY SSF102588 4 227 3.27E-57 T 14-10-2018 IPR024078 Putative deacetylase LmbE-like domain superfamily Reactome: R-HSA-162710 GYO_1663 ff072fe8be4a89bd4e0224e769f2b683 337 Gene3D G3DSA:3.90.550.10 1 223 2.7E-27 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases GYO_1663 ff072fe8be4a89bd4e0224e769f2b683 337 SUPERFAMILY SSF53448 5 252 1.78E-24 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases GYO_1663 ff072fe8be4a89bd4e0224e769f2b683 337 Pfam PF00535 Glycosyl transferase family 2 9 179 6.0E-28 T 14-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 GYO_1730 7811372be3adab5b2571761cea615187 288 Pfam PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase 166 286 7.9E-35 T 14-10-2018 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain GO:0051287 GYO_1730 7811372be3adab5b2571761cea615187 288 ProSitePatterns PS00895 3-hydroxyisobutyrate dehydrogenase signature. 7 20 - T 14-10-2018 IPR002204 3-hydroxyisobutyrate dehydrogenase-related, conserved site GO:0016491|GO:0055114 Reactome: R-HSA-70895 GYO_1730 7811372be3adab5b2571761cea615187 288 Gene3D G3DSA:1.10.1040.10 164 288 1.2E-38 T 14-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 GYO_1730 7811372be3adab5b2571761cea615187 288 PIRSF PIRSF000103 1 287 1.3E-69 T 14-10-2018 IPR015815 3-hydroxyisobutyrate dehydrogenase-related GO:0016491|GO:0055114 Reactome: R-HSA-70895 GYO_1730 7811372be3adab5b2571761cea615187 288 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 4 161 8.1E-54 T 14-10-2018 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0050661 GYO_1730 7811372be3adab5b2571761cea615187 288 SUPERFAMILY SSF48179 165 286 5.78E-37 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 GYO_1730 7811372be3adab5b2571761cea615187 288 Gene3D G3DSA:3.40.50.720 1 163 1.9E-54 T 14-10-2018 GYO_1730 7811372be3adab5b2571761cea615187 288 SUPERFAMILY SSF51735 3 164 2.19E-51 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily GYO_3986 ba12c06403daebf83f10c0811a9db912 238 SUPERFAMILY SSF52540 44 218 1.03E-39 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase GYO_3986 ba12c06403daebf83f10c0811a9db912 238 Gene3D G3DSA:3.40.50.300 3 235 4.9E-73 T 14-10-2018 GYO_3986 ba12c06403daebf83f10c0811a9db912 238 TIGRFAM TIGR01007 eps_fam: capsular exopolysaccharide family 27 229 1.4E-69 T 14-10-2018 IPR005702 Exopolysaccharide synthesis protein GO:0045226 GYO_3986 ba12c06403daebf83f10c0811a9db912 238 Pfam PF13614 AAA domain 46 187 2.2E-15 T 14-10-2018 IPR025669 AAA domain GYO_3783 c01ed5b378ee19f97b7f00f7a491744a 194 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 12 25 7.0E-10 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 GYO_3783 c01ed5b378ee19f97b7f00f7a491744a 194 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 33 56 7.0E-10 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 GYO_3783 c01ed5b378ee19f97b7f00f7a491744a 194 SUPERFAMILY SSF46689 4 82 2.82E-17 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 GYO_3783 c01ed5b378ee19f97b7f00f7a491744a 194 Gene3D G3DSA:1.10.357.10 1 194 1.1E-83 T 14-10-2018 GYO_3783 c01ed5b378ee19f97b7f00f7a491744a 194 Pfam PF00440 Bacterial regulatory proteins, tetR family 12 57 3.5E-16 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 GYO_3783 c01ed5b378ee19f97b7f00f7a491744a 194 SUPERFAMILY SSF48498 79 191 2.78E-10 T 14-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily GYO_4308 25530a98b1c39639612071e8c9a2c4f7 223 Pfam PF13739 Domain of unknown function (DUF4163) 46 127 4.2E-16 T 14-10-2018 IPR025303 Deacetylase PdaC GYO_4308 25530a98b1c39639612071e8c9a2c4f7 223 Gene3D G3DSA:3.30.565.40 27 141 5.1E-23 T 14-10-2018 GYO_4308 25530a98b1c39639612071e8c9a2c4f7 223 Gene3D G3DSA:3.90.640.20 143 223 9.2E-13 T 14-10-2018 IPR037126 PdaC/RsiV-like superfamily GYO_4308 25530a98b1c39639612071e8c9a2c4f7 223 Pfam PF11738 Protein of unknown function (DUF3298) 157 219 8.9E-9 T 14-10-2018 IPR021729 Domain of unknown function DUF3298 GYO_3945 aeb6d9f44b0096033720a40aa84e79e2 413 SUPERFAMILY SSF54001 295 412 1.67E-29 T 14-10-2018 IPR038765 Papain-like cysteine peptidase superfamily GYO_3945 aeb6d9f44b0096033720a40aa84e79e2 413 Pfam PF00877 NlpC/P60 family 48 157 5.9E-24 T 14-10-2018 IPR000064 Endopeptidase, NLPC/P60 domain GYO_3945 aeb6d9f44b0096033720a40aa84e79e2 413 Pfam PF00877 NlpC/P60 family 308 410 3.9E-21 T 14-10-2018 IPR000064 Endopeptidase, NLPC/P60 domain GYO_3945 aeb6d9f44b0096033720a40aa84e79e2 413 Pfam PF00877 NlpC/P60 family 178 285 4.0E-31 T 14-10-2018 IPR000064 Endopeptidase, NLPC/P60 domain GYO_3945 aeb6d9f44b0096033720a40aa84e79e2 413 SUPERFAMILY SSF54001 169 287 2.35E-39 T 14-10-2018 IPR038765 Papain-like cysteine peptidase superfamily GYO_3945 aeb6d9f44b0096033720a40aa84e79e2 413 SUPERFAMILY SSF54001 33 158 6.87E-35 T 14-10-2018 IPR038765 Papain-like cysteine peptidase superfamily GYO_3945 aeb6d9f44b0096033720a40aa84e79e2 413 Gene3D G3DSA:3.90.1720.10 162 288 4.2E-44 T 14-10-2018 GYO_3945 aeb6d9f44b0096033720a40aa84e79e2 413 Gene3D G3DSA:3.90.1720.10 289 413 2.1E-33 T 14-10-2018 GYO_3945 aeb6d9f44b0096033720a40aa84e79e2 413 Gene3D G3DSA:3.90.1720.10 26 160 1.1E-40 T 14-10-2018 GYO_4187 60d542d20a6013613325816824f717db 268 SUPERFAMILY SSF53448 2 204 1.61E-44 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases GYO_4187 60d542d20a6013613325816824f717db 268 Gene3D G3DSA:3.90.550.10 1 234 5.5E-40 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases GYO_4187 60d542d20a6013613325816824f717db 268 Pfam PF00535 Glycosyl transferase family 2 4 163 2.7E-30 T 14-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 GYO_3860 b31f94a1575c0d370e8b66d720f3224d 187 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 8 21 7.0E-11 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 GYO_3860 b31f94a1575c0d370e8b66d720f3224d 187 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 29 52 7.0E-11 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 GYO_3860 b31f94a1575c0d370e8b66d720f3224d 187 Pfam PF00440 Bacterial regulatory proteins, tetR family 8 54 1.5E-18 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 GYO_3860 b31f94a1575c0d370e8b66d720f3224d 187 SUPERFAMILY SSF46689 4 65 5.64E-16 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 GYO_3860 b31f94a1575c0d370e8b66d720f3224d 187 Gene3D G3DSA:1.10.357.10 2 175 2.7E-27 T 14-10-2018 GYO_0613 9cb862f7c2bcd2c82b917efa391bce0f 190 Gene3D G3DSA:1.10.10.10 1 58 3.9E-8 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily GYO_0613 9cb862f7c2bcd2c82b917efa391bce0f 190 SUPERFAMILY SSF160387 82 189 7.85E-24 T 14-10-2018 GYO_0613 9cb862f7c2bcd2c82b917efa391bce0f 190 SUPERFAMILY SSF46785 6 53 7.53E-9 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily GYO_0613 9cb862f7c2bcd2c82b917efa391bce0f 190 SMART SM00420 6 58 1.8E-11 T 14-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 GYO_0613 9cb862f7c2bcd2c82b917efa391bce0f 190 Pfam PF08220 DeoR-like helix-turn-helix domain 6 60 4.6E-14 T 14-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 GYO_2339 f19b806722d5a9779d14ad2216f05b21 944 Gene3D G3DSA:3.40.50.12470 553 813 4.7E-153 T 14-10-2018 GYO_2339 f19b806722d5a9779d14ad2216f05b21 944 Pfam PF00676 Dehydrogenase E1 component 220 533 8.8E-99 T 14-10-2018 IPR001017 Dehydrogenase, E1 component GO:0016624 Reactome: R-HSA-389661 GYO_2339 f19b806722d5a9779d14ad2216f05b21 944 TIGRFAM TIGR00239 2oxo_dh_E1: oxoglutarate dehydrogenase (succinyl-transferring), E1 component 16 939 0.0 T 14-10-2018 IPR011603 2-oxoglutarate dehydrogenase E1 component GO:0004591|GO:0006099|GO:0030976|GO:0055114 KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 GYO_2339 f19b806722d5a9779d14ad2216f05b21 944 PIRSF PIRSF000157 1 942 0.0 T 14-10-2018 IPR011603 2-oxoglutarate dehydrogenase E1 component GO:0004591|GO:0006099|GO:0030976|GO:0055114 KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 GYO_2339 f19b806722d5a9779d14ad2216f05b21 944 SUPERFAMILY SSF52518 150 529 1.03E-72 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold GYO_2339 f19b806722d5a9779d14ad2216f05b21 944 Pfam PF16870 2-oxoglutarate dehydrogenase C-terminal 796 939 3.0E-38 T 14-10-2018 IPR031717 Multifunctional 2-oxoglutarate metabolism enzyme, C-terminal KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 GYO_2339 f19b806722d5a9779d14ad2216f05b21 944 Gene3D G3DSA:3.40.50.11610 731 938 4.7E-153 T 14-10-2018 GYO_2339 f19b806722d5a9779d14ad2216f05b21 944 Hamap MF_01169 2-oxoglutarate dehydrogenase E1 component [odhA]. 2 942 23.733 T 14-10-2018 IPR023784 2-oxoglutarate dehydrogenase E1 component, bacterial KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 GYO_2339 f19b806722d5a9779d14ad2216f05b21 944 SMART SM00861 595 791 2.9E-44 T 14-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain GYO_2339 f19b806722d5a9779d14ad2216f05b21 944 Pfam PF02779 Transketolase, pyrimidine binding domain 594 791 5.8E-58 T 14-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain GYO_2339 f19b806722d5a9779d14ad2216f05b21 944 Gene3D G3DSA:3.40.50.970 153 534 2.8E-138 T 14-10-2018 GYO_2339 f19b806722d5a9779d14ad2216f05b21 944 SUPERFAMILY SSF52518 577 798 1.28E-42 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold GYO_2339 f19b806722d5a9779d14ad2216f05b21 944 Pfam PF16078 2-oxoglutarate dehydrogenase N-terminus 16 50 2.1E-6 T 14-10-2018 IPR032106 2-oxoglutarate dehydrogenase E1 component, N-terminal domain KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 GYO_1970 46acc8fccf659c775eb09e2dfe33ada2 467 Gene3D G3DSA:3.40.50.300 238 334 4.2E-26 T 14-10-2018 GYO_1970 46acc8fccf659c775eb09e2dfe33ada2 467 Hamap MF_00249 ATP-dependent protease ATPase subunit HslU [hslU]. 3 467 44.388 T 14-10-2018 IPR004491 Heat shock protein HslU GO:0005524|GO:0005737|GO:0009376|GO:0016887|GO:0070011 GYO_1970 46acc8fccf659c775eb09e2dfe33ada2 467 Pfam PF07724 AAA domain (Cdc48 subfamily) 213 353 1.2E-42 T 14-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 GYO_1970 46acc8fccf659c775eb09e2dfe33ada2 467 Gene3D G3DSA:1.10.8.10 250 270 4.2E-26 T 14-10-2018 GYO_1970 46acc8fccf659c775eb09e2dfe33ada2 467 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 55 108 6.8E-7 T 14-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 GYO_1970 46acc8fccf659c775eb09e2dfe33ada2 467 SMART SM00382 51 360 2.0E-12 T 14-10-2018 IPR003593 AAA+ ATPase domain GYO_1970 46acc8fccf659c775eb09e2dfe33ada2 467 TIGRFAM TIGR00390 hslU: ATP-dependent protease HslVU, ATPase subunit 6 467 1.7E-230 T 14-10-2018 IPR004491 Heat shock protein HslU GO:0005524|GO:0005737|GO:0009376|GO:0016887|GO:0070011 GYO_1970 46acc8fccf659c775eb09e2dfe33ada2 467 SMART SM01086 359 453 4.2E-26 T 14-10-2018 IPR019489 Clp ATPase, C-terminal GYO_1970 46acc8fccf659c775eb09e2dfe33ada2 467 Gene3D G3DSA:1.10.8.60 359 464 2.8E-41 T 14-10-2018 GYO_1970 46acc8fccf659c775eb09e2dfe33ada2 467 SUPERFAMILY SSF52540 6 465 4.92E-92 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase GYO_1970 46acc8fccf659c775eb09e2dfe33ada2 467 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 359 429 8.4E-8 T 14-10-2018 IPR019489 Clp ATPase, C-terminal GYO_1970 46acc8fccf659c775eb09e2dfe33ada2 467 Gene3D G3DSA:3.40.50.300 5 134 6.2E-35 T 14-10-2018 GYO_2001 262a4d4f33ef81e8929418d63ab69155 166 SUPERFAMILY SSF64438 8 164 1.65E-43 T 14-10-2018 IPR011324 Cytotoxic necrotizing factor-like, catalytic GYO_2001 262a4d4f33ef81e8929418d63ab69155 166 Hamap MF_01440 Chemoreceptor glutamine deamidase CheD [cheD]. 5 162 26.18 T 14-10-2018 IPR005659 Chemoreceptor glutamine deamidase CheD GO:0006935|GO:0050568 GYO_2001 262a4d4f33ef81e8929418d63ab69155 166 Pfam PF03975 CheD chemotactic sensory transduction 52 158 3.6E-32 T 14-10-2018 IPR005659 Chemoreceptor glutamine deamidase CheD GO:0006935|GO:0050568 GYO_2001 262a4d4f33ef81e8929418d63ab69155 166 Gene3D G3DSA:3.30.1330.200 6 166 1.9E-44 T 14-10-2018 IPR038592 CheD-like superfamily GYO_4240 e58f0d6e32c27650f41cc92d91af9c97 286 Pfam PF01501 Glycosyl transferase family 8 8 258 3.4E-65 T 14-10-2018 IPR002495 Glycosyl transferase, family 8 GO:0016757 GYO_4240 e58f0d6e32c27650f41cc92d91af9c97 286 Gene3D G3DSA:3.90.550.10 7 278 1.1E-78 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases GYO_4240 e58f0d6e32c27650f41cc92d91af9c97 286 SUPERFAMILY SSF53448 7 277 6.47E-69 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases GYO_3525 1b771efb380abf587a4dfe37df0b94ba 211 Pfam PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) 12 178 3.7E-28 T 14-10-2018 IPR019076 Sporulation lipoprotein YhcN/YlaJ-like GYO_3468 66bc617926377f0fad7cc5167dd51888 132 SUPERFAMILY SSF160515 4 126 4.32E-41 T 14-10-2018 GYO_3468 66bc617926377f0fad7cc5167dd51888 132 Gene3D G3DSA:3.30.1330.30 1 132 2.2E-51 T 14-10-2018 IPR029064 50S ribosomal protein L30e-like GYO_3468 66bc617926377f0fad7cc5167dd51888 132 Pfam PF07997 Protein of unknown function (DUF1694) 4 118 4.3E-40 T 14-10-2018 IPR012543 Protein of unknown function DUF1694 GYO_3468 66bc617926377f0fad7cc5167dd51888 132 PIRSF PIRSF034303 1 130 4.9E-40 T 14-10-2018 IPR012543 Protein of unknown function DUF1694 GYO_4344 14d24300015241d51a13af8d591f6274 421 SUPERFAMILY SSF51338 358 415 1.96E-17 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 GYO_4344 14d24300015241d51a13af8d591f6274 421 Gene3D G3DSA:2.30.40.10 10 410 2.7E-176 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 GYO_4344 14d24300015241d51a13af8d591f6274 421 Pfam PF01979 Amidohydrolase family 71 412 2.5E-18 T 14-10-2018 IPR006680 Amidohydrolase-related GO:0016787 GYO_4344 14d24300015241d51a13af8d591f6274 421 Gene3D G3DSA:3.20.20.140 75 372 2.7E-176 T 14-10-2018 GYO_4344 14d24300015241d51a13af8d591f6274 421 SUPERFAMILY SSF51556 74 372 4.77E-83 T 14-10-2018 IPR032466 Metal-dependent hydrolase GYO_4344 14d24300015241d51a13af8d591f6274 421 SUPERFAMILY SSF51338 3 72 3.02E-24 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 GYO_4344 14d24300015241d51a13af8d591f6274 421 TIGRFAM TIGR01224 hutI: imidazolonepropionase 35 411 5.6E-170 T 14-10-2018 IPR005920 Imidazolonepropionase GO:0005737|GO:0016812|GO:0019556 KEGG: 00340+3.5.2.7|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 GYO_4344 14d24300015241d51a13af8d591f6274 421 Hamap MF_00372 Imidazolonepropionase [hutI]. 6 412 42.848 T 14-10-2018 IPR005920 Imidazolonepropionase GO:0005737|GO:0016812|GO:0019556 KEGG: 00340+3.5.2.7|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 GYO_0373 7d95afde2b876fb41fc3e78776554d23 484 Gene3D G3DSA:2.170.120.40 234 319 7.1E-19 T 14-10-2018 GYO_0373 7d95afde2b876fb41fc3e78776554d23 484 Gene3D G3DSA:2.170.120.40 144 232 6.6E-9 T 14-10-2018 GYO_0373 7d95afde2b876fb41fc3e78776554d23 484 Pfam PF07949 YbbR-like protein 55 135 5.8E-12 T 14-10-2018 IPR012505 YbbR-like GYO_0373 7d95afde2b876fb41fc3e78776554d23 484 Pfam PF07949 YbbR-like protein 237 316 4.1E-17 T 14-10-2018 IPR012505 YbbR-like GYO_0373 7d95afde2b876fb41fc3e78776554d23 484 Pfam PF07949 YbbR-like protein 143 228 2.4E-15 T 14-10-2018 IPR012505 YbbR-like GYO_0373 7d95afde2b876fb41fc3e78776554d23 484 Gene3D G3DSA:2.170.120.30 324 421 1.1E-14 T 14-10-2018 GYO_0373 7d95afde2b876fb41fc3e78776554d23 484 Gene3D G3DSA:2.170.120.30 43 143 5.7E-29 T 14-10-2018 GYO_3633 7a7af084b967330773b2aaba2faaf921 385 SUPERFAMILY SSF51182 10 378 1.21E-104 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily GYO_3633 7a7af084b967330773b2aaba2faaf921 385 Gene3D G3DSA:2.60.120.10 8 373 2.5E-177 T 14-10-2018 IPR014710 RmlC-like jelly roll fold GYO_3633 7a7af084b967330773b2aaba2faaf921 385 Gene3D G3DSA:2.60.120.10 56 229 2.5E-177 T 14-10-2018 IPR014710 RmlC-like jelly roll fold GYO_3633 7a7af084b967330773b2aaba2faaf921 385 Pfam PF00190 Cupin 229 365 2.1E-28 T 14-10-2018 IPR006045 Cupin 1 GO:0045735 GYO_3633 7a7af084b967330773b2aaba2faaf921 385 Pfam PF00190 Cupin 56 190 1.9E-24 T 14-10-2018 IPR006045 Cupin 1 GO:0045735 GYO_3633 7a7af084b967330773b2aaba2faaf921 385 SMART SM00835 50 192 2.8E-23 T 14-10-2018 IPR006045 Cupin 1 GO:0045735 GYO_3633 7a7af084b967330773b2aaba2faaf921 385 SMART SM00835 228 369 1.3E-33 T 14-10-2018 IPR006045 Cupin 1 GO:0045735 GYO_3633 7a7af084b967330773b2aaba2faaf921 385 TIGRFAM TIGR03404 bicupin_oxalic: bicupin, oxalate decarboxylase family 14 379 3.4E-183 T 14-10-2018 IPR017774 Bicupin, oxalate decarboxylase/oxidase GO:0033609 KEGG: 00630+4.1.1.2|MetaCyc: PWY-6698 GYO_3307 de7aeed73092ed2c5f344b0a0007f606 400 Pfam PF02773 S-adenosylmethionine synthetase, C-terminal domain 247 386 4.0E-70 T 14-10-2018 IPR022630 S-adenosylmethionine synthetase, C-terminal GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 GYO_3307 de7aeed73092ed2c5f344b0a0007f606 400 ProSitePatterns PS00376 S-adenosylmethionine synthase signature 1. 129 139 - T 14-10-2018 IPR022631 S-adenosylmethionine synthetase, conserved site GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 GYO_3307 de7aeed73092ed2c5f344b0a0007f606 400 SUPERFAMILY SSF55973 247 395 1.33E-69 T 14-10-2018 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 GYO_3307 de7aeed73092ed2c5f344b0a0007f606 400 TIGRFAM TIGR01034 metK: methionine adenosyltransferase 7 395 5.9E-191 T 14-10-2018 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 GYO_3307 de7aeed73092ed2c5f344b0a0007f606 400 Gene3D G3DSA:3.30.300.10 13 284 4.3E-183 T 14-10-2018 GYO_3307 de7aeed73092ed2c5f344b0a0007f606 400 SUPERFAMILY SSF55973 125 246 2.35E-54 T 14-10-2018 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 GYO_3307 de7aeed73092ed2c5f344b0a0007f606 400 Hamap MF_00086 S-adenosylmethionine synthase [metK]. 4 397 60.801 T 14-10-2018 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 GYO_3307 de7aeed73092ed2c5f344b0a0007f606 400 SUPERFAMILY SSF55973 5 111 1.22E-47 T 14-10-2018 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 GYO_3307 de7aeed73092ed2c5f344b0a0007f606 400 PIRSF PIRSF000497 1 398 5.2E-182 T 14-10-2018 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 GYO_3307 de7aeed73092ed2c5f344b0a0007f606 400 Gene3D G3DSA:3.30.300.10 104 389 4.3E-183 T 14-10-2018 GYO_3307 de7aeed73092ed2c5f344b0a0007f606 400 Pfam PF00438 S-adenosylmethionine synthetase, N-terminal domain 6 103 2.2E-44 T 14-10-2018 IPR022628 S-adenosylmethionine synthetase, N-terminal GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 GYO_3307 de7aeed73092ed2c5f344b0a0007f606 400 Pfam PF02772 S-adenosylmethionine synthetase, central domain 128 245 5.4E-51 T 14-10-2018 IPR022629 S-adenosylmethionine synthetase, central domain GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 GYO_3307 de7aeed73092ed2c5f344b0a0007f606 400 Gene3D G3DSA:3.30.300.10 7 247 4.3E-183 T 14-10-2018 GYO_3307 de7aeed73092ed2c5f344b0a0007f606 400 ProSitePatterns PS00377 S-adenosylmethionine synthase signature 2. 273 281 - T 14-10-2018 IPR022631 S-adenosylmethionine synthetase, conserved site GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 GYO_2415 d23a8900a3cb1894aca877169179a3de 382 Gene3D G3DSA:3.40.50.2000 189 353 8.9E-36 T 14-10-2018 GYO_2415 d23a8900a3cb1894aca877169179a3de 382 Pfam PF00534 Glycosyl transferases group 1 184 350 5.5E-21 T 14-10-2018 IPR001296 Glycosyl transferase, family 1 GYO_2415 d23a8900a3cb1894aca877169179a3de 382 SUPERFAMILY SSF53756 5 367 6.91E-43 T 14-10-2018 GYO_2415 d23a8900a3cb1894aca877169179a3de 382 Hamap MF_01280 Processive diacylglycerol beta-glucosyltransferase [ugtP]. 1 382 56.444 T 14-10-2018 IPR023589 Processive diacylglycerol beta-glucosyltransferase GO:0047228 KEGG: 00561+2.4.1.315|MetaCyc: PWY-7817 GYO_2415 d23a8900a3cb1894aca877169179a3de 382 Pfam PF06925 Monogalactosyldiacylglycerol (MGDG) synthase 18 179 2.0E-47 T 14-10-2018 IPR009695 Diacylglycerol glucosyltransferase, N-terminal GO:0009247|GO:0016758 GYO_1325 d98f9789b689cfcbebbb504fc8daf20a 529 PRINTS PR00154 AMP-binding signature 184 195 7.3E-5 T 14-10-2018 IPR020459 AMP-binding GYO_1325 d98f9789b689cfcbebbb504fc8daf20a 529 PRINTS PR00154 AMP-binding signature 196 204 7.3E-5 T 14-10-2018 IPR020459 AMP-binding GYO_1325 d98f9789b689cfcbebbb504fc8daf20a 529 Pfam PF13193 AMP-binding enzyme C-terminal domain 443 517 1.4E-22 T 14-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain GYO_1325 d98f9789b689cfcbebbb504fc8daf20a 529 Pfam PF00501 AMP-binding enzyme 23 434 1.5E-122 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 GYO_1325 d98f9789b689cfcbebbb504fc8daf20a 529 SUPERFAMILY SSF56801 9 527 6.93E-168 T 14-10-2018 GYO_1325 d98f9789b689cfcbebbb504fc8daf20a 529 ProSitePatterns PS00455 Putative AMP-binding domain signature. 189 200 - T 14-10-2018 IPR020845 AMP-binding, conserved site GYO_1325 d98f9789b689cfcbebbb504fc8daf20a 529 Gene3D G3DSA:3.40.50.12780 14 427 1.6E-134 T 14-10-2018 GYO_1325 d98f9789b689cfcbebbb504fc8daf20a 529 Gene3D G3DSA:3.30.300.310 430 528 5.7E-35 T 14-10-2018 GYO_2220 6b365c79bedf3c2cfab370e99cd555a4 122 PIRSF PIRSF021424 1 122 4.3E-76 T 14-10-2018 IPR003432 Replication terminator protein GO:0003677|GO:0006274 GYO_2220 6b365c79bedf3c2cfab370e99cd555a4 122 ProDom PD077583 REPLICATION TRANSCRIPTION DNA-BINDING TERMINATOR REGULATION TERMINATION 3D-STRUCTURE 11 122 4.0E-58 T 14-10-2018 IPR003432 Replication terminator protein GO:0003677|GO:0006274 GYO_2220 6b365c79bedf3c2cfab370e99cd555a4 122 Gene3D G3DSA:1.10.10.10 1 122 4.1E-50 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily GYO_2220 6b365c79bedf3c2cfab370e99cd555a4 122 Pfam PF02334 Replication terminator protein 1 122 5.3E-81 T 14-10-2018 IPR003432 Replication terminator protein GO:0003677|GO:0006274 GYO_2220 6b365c79bedf3c2cfab370e99cd555a4 122 SUPERFAMILY SSF46785 7 122 9.98E-19 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily GYO_4358 2c6b3c221f46fcb8ebc22cfb5ffe6343 275 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 67 80 - T 14-10-2018 IPR018313 Solute-binding protein family 3, conserved site GYO_4358 2c6b3c221f46fcb8ebc22cfb5ffe6343 275 SUPERFAMILY SSF53850 14 269 2.05E-66 T 14-10-2018 GYO_4358 2c6b3c221f46fcb8ebc22cfb5ffe6343 275 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 46 267 3.7E-61 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF GYO_4358 2c6b3c221f46fcb8ebc22cfb5ffe6343 275 Gene3D G3DSA:3.40.190.10 51 265 4.7E-64 T 14-10-2018 GYO_4358 2c6b3c221f46fcb8ebc22cfb5ffe6343 275 SMART SM00062 45 268 5.4E-82 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF GYO_4358 2c6b3c221f46fcb8ebc22cfb5ffe6343 275 Gene3D G3DSA:3.40.190.10 127 228 4.7E-64 T 14-10-2018 GYO_3966 cdd0da0d716ee1ece759ceb50c20ec76 525 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 339 357 4.8E-41 T 14-10-2018 GYO_3966 cdd0da0d716ee1ece759ceb50c20ec76 525 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 421 438 4.8E-41 T 14-10-2018 GYO_3966 cdd0da0d716ee1ece759ceb50c20ec76 525 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 102 120 4.8E-41 T 14-10-2018 GYO_3966 cdd0da0d716ee1ece759ceb50c20ec76 525 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 120 139 4.8E-41 T 14-10-2018 GYO_3966 cdd0da0d716ee1ece759ceb50c20ec76 525 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 218 234 4.8E-41 T 14-10-2018 GYO_3966 cdd0da0d716ee1ece759ceb50c20ec76 525 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 394 409 4.8E-41 T 14-10-2018 GYO_3966 cdd0da0d716ee1ece759ceb50c20ec76 525 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 247 266 4.8E-41 T 14-10-2018 GYO_3966 cdd0da0d716ee1ece759ceb50c20ec76 525 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 32 57 4.8E-41 T 14-10-2018 GYO_3966 cdd0da0d716ee1ece759ceb50c20ec76 525 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 363 381 4.8E-41 T 14-10-2018 GYO_3966 cdd0da0d716ee1ece759ceb50c20ec76 525 TIGRFAM TIGR00066 g_glut_trans: gamma-glutamyltransferase 10 517 8.1E-200 T 14-10-2018 IPR000101 Gamma-glutamyltranspeptidase GO:0006751|GO:0036374 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-4061|MetaCyc: PWY-5826|MetaCyc: PWY-6842|MetaCyc: PWY-7112|MetaCyc: PWY-7559 GYO_3966 cdd0da0d716ee1ece759ceb50c20ec76 525 Gene3D G3DSA:3.60.20.40 340 525 5.2E-67 T 14-10-2018 GYO_3966 cdd0da0d716ee1ece759ceb50c20ec76 525 Gene3D G3DSA:1.10.246.130 234 339 1.8E-31 T 14-10-2018 GYO_3966 cdd0da0d716ee1ece759ceb50c20ec76 525 Pfam PF01019 Gamma-glutamyltranspeptidase 25 520 1.1E-159 T 14-10-2018 GYO_3966 cdd0da0d716ee1ece759ceb50c20ec76 525 SUPERFAMILY SSF56235 4 524 4.24E-166 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal GYO_4378 bb00d40597c89d92107a4a9f030f49b6 438 ProSitePatterns PS00217 Sugar transport proteins signature 2. 111 136 - T 14-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 GYO_4378 bb00d40597c89d92107a4a9f030f49b6 438 Gene3D G3DSA:1.20.1250.20 12 428 3.5E-52 T 14-10-2018 GYO_4378 bb00d40597c89d92107a4a9f030f49b6 438 ProSitePatterns PS00216 Sugar transport proteins signature 1. 69 85 - T 14-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 GYO_4378 bb00d40597c89d92107a4a9f030f49b6 438 SUPERFAMILY SSF103473 11 420 7.72E-59 T 14-10-2018 IPR036259 MFS transporter superfamily GYO_4378 bb00d40597c89d92107a4a9f030f49b6 438 Pfam PF07690 Major Facilitator Superfamily 33 370 6.4E-33 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 GYO_0853 da3bdecdd91b538616866d43670994fe 325 Gene3D G3DSA:3.90.650.10 146 324 2.6E-45 T 14-10-2018 IPR036676 PurM-like, C-terminal domain superfamily GYO_0853 da3bdecdd91b538616866d43670994fe 325 SUPERFAMILY SSF56042 145 306 3.59E-27 T 14-10-2018 IPR036676 PurM-like, C-terminal domain superfamily GYO_0853 da3bdecdd91b538616866d43670994fe 325 Gene3D G3DSA:3.30.1330.10 1 145 1.1E-42 T 14-10-2018 IPR036921 PurM-like, N-terminal domain superfamily GYO_0853 da3bdecdd91b538616866d43670994fe 325 TIGRFAM TIGR01379 thiL: thiamine-phosphate kinase 2 324 1.2E-119 T 14-10-2018 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897 GYO_0853 da3bdecdd91b538616866d43670994fe 325 Pfam PF02769 AIR synthase related protein, C-terminal domain 151 307 3.6E-8 T 14-10-2018 IPR010918 PurM-like, C-terminal domain GYO_0853 da3bdecdd91b538616866d43670994fe 325 SUPERFAMILY SSF55326 3 140 8.02E-34 T 14-10-2018 IPR036921 PurM-like, N-terminal domain superfamily GYO_0853 da3bdecdd91b538616866d43670994fe 325 PIRSF PIRSF005303 1 324 1.0E-107 T 14-10-2018 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897 GYO_0853 da3bdecdd91b538616866d43670994fe 325 Hamap MF_02128 Thiamine-monophosphate kinase [thiL]. 1 324 29.685 T 14-10-2018 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897 GYO_0853 da3bdecdd91b538616866d43670994fe 325 Pfam PF00586 AIR synthase related protein, N-terminal domain 26 139 3.2E-22 T 14-10-2018 IPR016188 PurM-like, N-terminal domain GYO_0606 a449464896d2cf36b023d35eaa72fd25 436 Pfam PF00202 Aminotransferase class-III 32 432 4.8E-120 T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 GYO_0606 a449464896d2cf36b023d35eaa72fd25 436 TIGRFAM TIGR00700 GABAtrnsam: 4-aminobutyrate transaminase 15 435 1.0E-233 T 14-10-2018 IPR004632 4-aminobutyrate aminotransferase, bacterial GO:0003867|GO:0009448 GYO_0606 a449464896d2cf36b023d35eaa72fd25 436 Gene3D G3DSA:3.90.1150.10 13 430 3.0E-158 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 GYO_0606 a449464896d2cf36b023d35eaa72fd25 436 SUPERFAMILY SSF53383 32 434 4.21E-128 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase GYO_0606 a449464896d2cf36b023d35eaa72fd25 436 Gene3D G3DSA:3.40.640.10 65 332 3.0E-158 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 GYO_0606 a449464896d2cf36b023d35eaa72fd25 436 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 249 286 - T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 GYO_0606 a449464896d2cf36b023d35eaa72fd25 436 PIRSF PIRSF000521 131 436 5.0E-36 T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 GYO_0606 a449464896d2cf36b023d35eaa72fd25 436 PIRSF PIRSF000521 31 136 2.0E-7 T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 GYO_1580 4c1eaf1353f2b7766388f9265f520090 147 SUPERFAMILY SSF69279 6 142 2.38E-49 T 14-10-2018 GYO_1580 4c1eaf1353f2b7766388f9265f520090 147 Gene3D G3DSA:2.30.110.40 1 142 1.1E-61 T 14-10-2018 IPR038628 XkdM-like superfamily GYO_1580 4c1eaf1353f2b7766388f9265f520090 147 Pfam PF09393 Phage tail tube protein 2 141 3.4E-54 T 14-10-2018 IPR018989 Phage tail tube protein GYO_1319 95cf54252de7b7fad962e22fbce2c37f 135 Gene3D G3DSA:3.10.400.10 2 134 1.9E-24 T 14-10-2018 GYO_1319 95cf54252de7b7fad962e22fbce2c37f 135 PIRSF PIRSF021320 2 135 2.3E-35 T 14-10-2018 IPR009326 Protein of unknown function DUF984 GYO_1319 95cf54252de7b7fad962e22fbce2c37f 135 SUPERFAMILY SSF88697 8 134 5.72E-33 T 14-10-2018 IPR015947 PUA-like superfamily GYO_1319 95cf54252de7b7fad962e22fbce2c37f 135 SMART SM01022 16 134 7.9E-7 T 14-10-2018 IPR007374 ASCH domain GYO_1319 95cf54252de7b7fad962e22fbce2c37f 135 Pfam PF04266 ASCH domain 18 133 7.9E-7 T 14-10-2018 IPR007374 ASCH domain GYO_1543 2ed6475720e784787bb690d13e0b24f1 359 TIGRFAM TIGR00695 uxuA: mannonate dehydratase 1 356 4.9E-179 T 14-10-2018 IPR004628 Mannonate dehydratase GO:0006064|GO:0008927 KEGG: 00040+4.2.1.8|MetaCyc: PWY-7242 GYO_1543 2ed6475720e784787bb690d13e0b24f1 359 Hamap MF_00106 Mannonate dehydratase [uxuA]. 1 359 160.651 T 14-10-2018 IPR004628 Mannonate dehydratase GO:0006064|GO:0008927 KEGG: 00040+4.2.1.8|MetaCyc: PWY-7242 GYO_1543 2ed6475720e784787bb690d13e0b24f1 359 Gene3D G3DSA:3.20.20.150 1 356 6.9E-143 T 14-10-2018 GYO_1543 2ed6475720e784787bb690d13e0b24f1 359 PIRSF PIRSF016049 1 356 4.6E-129 T 14-10-2018 IPR004628 Mannonate dehydratase GO:0006064|GO:0008927 KEGG: 00040+4.2.1.8|MetaCyc: PWY-7242 GYO_1543 2ed6475720e784787bb690d13e0b24f1 359 SUPERFAMILY SSF51658 1 347 4.1E-87 T 14-10-2018 IPR036237 Xylose isomerase-like superfamily GYO_1543 2ed6475720e784787bb690d13e0b24f1 359 Pfam PF03786 D-mannonate dehydratase (UxuA) 1 350 3.2E-164 T 14-10-2018 IPR004628 Mannonate dehydratase GO:0006064|GO:0008927 KEGG: 00040+4.2.1.8|MetaCyc: PWY-7242 GYO_1337 5b65b1d0432960f0befc81ba443de592 364 Gene3D G3DSA:3.40.47.10 4 245 6.1E-115 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 GYO_1337 5b65b1d0432960f0befc81ba443de592 364 Gene3D G3DSA:3.40.47.10 120 359 6.1E-115 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 GYO_1337 5b65b1d0432960f0befc81ba443de592 364 ProSitePatterns PS00737 Thiolases signature 2. 308 324 - T 14-10-2018 IPR020613 Thiolase, conserved site GO:0016747 GYO_1337 5b65b1d0432960f0befc81ba443de592 364 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 5 361 2.0E-106 T 14-10-2018 IPR002155 Thiolase GO:0016747 GYO_1337 5b65b1d0432960f0befc81ba443de592 364 SUPERFAMILY SSF53901 2 234 2.13E-51 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 GYO_1337 5b65b1d0432960f0befc81ba443de592 364 Pfam PF00108 Thiolase, N-terminal domain 4 232 6.3E-49 T 14-10-2018 IPR020616 Thiolase, N-terminal GO:0016747 GYO_1337 5b65b1d0432960f0befc81ba443de592 364 Pfam PF02803 Thiolase, C-terminal domain 240 361 1.3E-30 T 14-10-2018 IPR020617 Thiolase, C-terminal GO:0016747 GYO_1337 5b65b1d0432960f0befc81ba443de592 364 PIRSF PIRSF000429 2 364 1.0E-102 T 14-10-2018 IPR002155 Thiolase GO:0016747 GYO_1337 5b65b1d0432960f0befc81ba443de592 364 SUPERFAMILY SSF53901 240 362 1.21E-31 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 GYO_0252 80f4c853709e56ce608f4138fb0df932 324 Gene3D G3DSA:3.10.350.10 175 239 1.3E-21 T 14-10-2018 IPR036779 LysM domain superfamily GYO_0252 80f4c853709e56ce608f4138fb0df932 324 SUPERFAMILY SSF54106 179 224 9.29E-13 T 14-10-2018 GYO_0252 80f4c853709e56ce608f4138fb0df932 324 Pfam PF01471 Putative peptidoglycan binding domain 258 318 7.9E-17 T 14-10-2018 IPR002477 Peptidoglycan binding-like GYO_0252 80f4c853709e56ce608f4138fb0df932 324 SMART SM00257 181 225 2.5E-20 T 14-10-2018 IPR018392 LysM domain GYO_0252 80f4c853709e56ce608f4138fb0df932 324 Gene3D G3DSA:1.10.101.10 249 323 9.0E-19 T 14-10-2018 IPR036366 PGBD superfamily Reactome: R-HSA-1442490|Reactome: R-HSA-1474228 GYO_0252 80f4c853709e56ce608f4138fb0df932 324 SUPERFAMILY SSF55846 13 157 2.45E-45 T 14-10-2018 IPR036505 N-acetylmuramoyl-L-alanine amidase/PGRP domain superfamily GO:0008745|GO:0009253 Reactome: R-HSA-6803157 GYO_0252 80f4c853709e56ce608f4138fb0df932 324 Gene3D G3DSA:3.40.80.10 3 165 2.1E-48 T 14-10-2018 IPR036505 N-acetylmuramoyl-L-alanine amidase/PGRP domain superfamily GO:0008745|GO:0009253 Reactome: R-HSA-6803157 GYO_0252 80f4c853709e56ce608f4138fb0df932 324 Pfam PF01510 N-acetylmuramoyl-L-alanine amidase 25 142 9.4E-18 T 14-10-2018 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 Reactome: R-HSA-6803157 GYO_0252 80f4c853709e56ce608f4138fb0df932 324 SUPERFAMILY SSF47090 249 319 2.56E-16 T 14-10-2018 IPR036365 PGBD-like superfamily GYO_0252 80f4c853709e56ce608f4138fb0df932 324 Pfam PF01476 LysM domain 182 224 1.5E-17 T 14-10-2018 IPR018392 LysM domain GYO_0252 80f4c853709e56ce608f4138fb0df932 324 SMART SM00644 15 153 3.1E-39 T 14-10-2018 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 Reactome: R-HSA-6803157 GYO_0331 80f4c853709e56ce608f4138fb0df932 324 Gene3D G3DSA:3.10.350.10 175 239 1.3E-21 T 14-10-2018 IPR036779 LysM domain superfamily GYO_0331 80f4c853709e56ce608f4138fb0df932 324 SUPERFAMILY SSF54106 179 224 9.29E-13 T 14-10-2018 GYO_0331 80f4c853709e56ce608f4138fb0df932 324 Pfam PF01471 Putative peptidoglycan binding domain 258 318 7.9E-17 T 14-10-2018 IPR002477 Peptidoglycan binding-like GYO_0331 80f4c853709e56ce608f4138fb0df932 324 SMART SM00257 181 225 2.5E-20 T 14-10-2018 IPR018392 LysM domain GYO_0331 80f4c853709e56ce608f4138fb0df932 324 Gene3D G3DSA:1.10.101.10 249 323 9.0E-19 T 14-10-2018 IPR036366 PGBD superfamily Reactome: R-HSA-1442490|Reactome: R-HSA-1474228 GYO_0331 80f4c853709e56ce608f4138fb0df932 324 SUPERFAMILY SSF55846 13 157 2.45E-45 T 14-10-2018 IPR036505 N-acetylmuramoyl-L-alanine amidase/PGRP domain superfamily GO:0008745|GO:0009253 Reactome: R-HSA-6803157 GYO_0331 80f4c853709e56ce608f4138fb0df932 324 Gene3D G3DSA:3.40.80.10 3 165 2.1E-48 T 14-10-2018 IPR036505 N-acetylmuramoyl-L-alanine amidase/PGRP domain superfamily GO:0008745|GO:0009253 Reactome: R-HSA-6803157 GYO_0331 80f4c853709e56ce608f4138fb0df932 324 Pfam PF01510 N-acetylmuramoyl-L-alanine amidase 25 142 9.4E-18 T 14-10-2018 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 Reactome: R-HSA-6803157 GYO_0331 80f4c853709e56ce608f4138fb0df932 324 SUPERFAMILY SSF47090 249 319 2.56E-16 T 14-10-2018 IPR036365 PGBD-like superfamily GYO_0331 80f4c853709e56ce608f4138fb0df932 324 Pfam PF01476 LysM domain 182 224 1.5E-17 T 14-10-2018 IPR018392 LysM domain GYO_0331 80f4c853709e56ce608f4138fb0df932 324 SMART SM00644 15 153 3.1E-39 T 14-10-2018 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 Reactome: R-HSA-6803157 GYO_3796 cf86f4e36f5b8a2f15cf5fc367ebe50c 589 SUPERFAMILY SSF81296 1 109 9.8E-23 T 14-10-2018 IPR014756 Immunoglobulin E-set GYO_3796 cf86f4e36f5b8a2f15cf5fc367ebe50c 589 Pfam PF02903 Alpha amylase, N-terminal ig-like domain 2 124 8.5E-40 T 14-10-2018 IPR004185 Glycoside hydrolase, family 13, N-terminal Ig-like domain GO:0004553|GO:0005975 GYO_3796 cf86f4e36f5b8a2f15cf5fc367ebe50c 589 SMART SM00642 142 497 3.3E-120 T 14-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 GYO_3796 cf86f4e36f5b8a2f15cf5fc367ebe50c 589 Gene3D G3DSA:3.90.400.10 249 299 4.8E-155 T 14-10-2018 GYO_3796 cf86f4e36f5b8a2f15cf5fc367ebe50c 589 Gene3D G3DSA:3.20.20.80 137 499 4.8E-155 T 14-10-2018 GYO_3796 cf86f4e36f5b8a2f15cf5fc367ebe50c 589 Pfam PF00128 Alpha amylase, catalytic domain 176 469 1.7E-79 T 14-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 GYO_3796 cf86f4e36f5b8a2f15cf5fc367ebe50c 589 SUPERFAMILY SSF51011 510 583 1.74E-6 T 14-10-2018 GYO_3796 cf86f4e36f5b8a2f15cf5fc367ebe50c 589 SUPERFAMILY SSF51445 67 503 2.02E-125 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily GYO_3796 cf86f4e36f5b8a2f15cf5fc367ebe50c 589 Gene3D G3DSA:2.60.40.10 2 128 1.2E-36 T 14-10-2018 IPR013783 Immunoglobulin-like fold GYO_3796 cf86f4e36f5b8a2f15cf5fc367ebe50c 589 PIRSF PIRSF001024 106 576 2.0E-51 T 14-10-2018 IPR013777 Alpha-amylase-like GO:0004556|GO:0005509|GO:0005975 GYO_0619 eddbc8830b2282ed724ba3e6ca4f120a 211 Gene3D G3DSA:3.40.50.1820 4 193 2.6E-25 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold GYO_0619 eddbc8830b2282ed724ba3e6ca4f120a 211 Pfam PF01738 Dienelactone hydrolase family 7 181 3.5E-21 T 14-10-2018 IPR002925 Dienelactone hydrolase GO:0016787 GYO_0619 eddbc8830b2282ed724ba3e6ca4f120a 211 SUPERFAMILY SSF53474 13 179 3.21E-21 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold GYO_2804 bcf6503601248dc378a8dd7e2e105a1f 93 Pfam PF07873 YabP family 27 90 5.7E-18 T 14-10-2018 IPR022476 Sporulation protein YabP/YqfC GYO_2804 bcf6503601248dc378a8dd7e2e105a1f 93 TIGRFAM TIGR02856 spore_yqfC: sporulation protein YqfC 8 92 1.4E-37 T 14-10-2018 IPR022477 Sporulation protein YqfC GYO_0919 8f98f64376db4dbcda0423462ae85d92 104 SUPERFAMILY SSF48295 3 94 5.02E-33 T 14-10-2018 IPR010921 Trp repressor/replication initiator GO:0043565 GYO_0919 8f98f64376db4dbcda0423462ae85d92 104 PIRSF PIRSF012508 1 100 1.1E-48 T 14-10-2018 IPR013368 TrpR homologue YerC/YecD GYO_0919 8f98f64376db4dbcda0423462ae85d92 104 Gene3D G3DSA:1.10.1270.10 2 104 3.3E-40 T 14-10-2018 IPR038116 TrpR-like superfamily GYO_0919 8f98f64376db4dbcda0423462ae85d92 104 TIGRFAM TIGR02531 yecD_yerC: TrpR homolog YerC/YecD 7 94 3.9E-50 T 14-10-2018 IPR013368 TrpR homologue YerC/YecD GYO_0919 8f98f64376db4dbcda0423462ae85d92 104 Pfam PF01371 Trp repressor protein 10 94 6.9E-35 T 14-10-2018 IPR000831 Trp repressor GO:0003700|GO:0005622|GO:0006355 GYO_4352 a210227700e77454c2ed56f5aca7d106 275 Pfam PF06724 Domain of Unknown Function (DUF1206) 25 91 2.6E-15 T 14-10-2018 IPR009597 Domain of unknown function DUF1206 GYO_4352 a210227700e77454c2ed56f5aca7d106 275 Pfam PF06724 Domain of Unknown Function (DUF1206) 108 174 4.9E-16 T 14-10-2018 IPR009597 Domain of unknown function DUF1206 GYO_4352 a210227700e77454c2ed56f5aca7d106 275 Pfam PF06724 Domain of Unknown Function (DUF1206) 200 268 2.0E-17 T 14-10-2018 IPR009597 Domain of unknown function DUF1206 GYO_3942 3965f32cae073a1648438ab2b9c69bdb 457 PRINTS PR00171 Sugar transporter signature 363 375 1.2E-25 T 14-10-2018 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022857|GO:0055085 Reactome: R-HSA-189200 GYO_3942 3965f32cae073a1648438ab2b9c69bdb 457 PRINTS PR00171 Sugar transporter signature 100 119 1.2E-25 T 14-10-2018 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022857|GO:0055085 Reactome: R-HSA-189200 GYO_3942 3965f32cae073a1648438ab2b9c69bdb 457 PRINTS PR00171 Sugar transporter signature 251 261 1.2E-25 T 14-10-2018 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022857|GO:0055085 Reactome: R-HSA-189200 GYO_3942 3965f32cae073a1648438ab2b9c69bdb 457 PRINTS PR00171 Sugar transporter signature 17 27 1.2E-25 T 14-10-2018 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022857|GO:0055085 Reactome: R-HSA-189200 GYO_3942 3965f32cae073a1648438ab2b9c69bdb 457 PRINTS PR00171 Sugar transporter signature 340 361 1.2E-25 T 14-10-2018 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022857|GO:0055085 Reactome: R-HSA-189200 GYO_3942 3965f32cae073a1648438ab2b9c69bdb 457 ProSitePatterns PS00217 Sugar transport proteins signature 2. 105 130 - T 14-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 GYO_3942 3965f32cae073a1648438ab2b9c69bdb 457 Gene3D G3DSA:1.20.1250.20 3 441 8.4E-141 T 14-10-2018 GYO_3942 3965f32cae073a1648438ab2b9c69bdb 457 ProSitePatterns PS00216 Sugar transport proteins signature 1. 295 311 - T 14-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 GYO_3942 3965f32cae073a1648438ab2b9c69bdb 457 SUPERFAMILY SSF103473 6 437 1.83E-85 T 14-10-2018 IPR036259 MFS transporter superfamily GYO_3942 3965f32cae073a1648438ab2b9c69bdb 457 Pfam PF00083 Sugar (and other) transporter 11 438 6.4E-128 T 14-10-2018 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 GYO_3942 3965f32cae073a1648438ab2b9c69bdb 457 TIGRFAM TIGR00879 SP: MFS transporter, sugar porter (SP) family 9 435 5.2E-120 T 14-10-2018 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022857|GO:0055085 Reactome: R-HSA-189200 GYO_1387 77a2f5fc85fd49181d85c2c8b9f2fcc9 268 Pfam PF00494 Squalene/phytoene synthase 22 252 9.6E-42 T 14-10-2018 GYO_1387 77a2f5fc85fd49181d85c2c8b9f2fcc9 268 Gene3D G3DSA:1.10.600.10 1 268 5.6E-82 T 14-10-2018 IPR008949 Isoprenoid synthase domain superfamily GYO_1387 77a2f5fc85fd49181d85c2c8b9f2fcc9 268 SUPERFAMILY SSF48576 7 261 2.88E-42 T 14-10-2018 IPR008949 Isoprenoid synthase domain superfamily GYO_4014 f7258154ac47a18e39a04fdce95fcce3 153 ProDom PD092006 MEMBRANE YWOB TRANSMEMBRANE 20 137 2.0E-60 T 14-10-2018 IPR020218 Uncharacterised protein family, YwoB, transmembrane GYO_4551 ea96da9ce651b8e06c07064f01813f62 321 PIRSF PIRSF000102 3 320 6.3E-115 T 14-10-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 GYO_4551 ea96da9ce651b8e06c07064f01813f62 321 Hamap MF_00488 L-lactate dehydrogenase [ldh]. 6 315 47.938 T 14-10-2018 IPR011304 L-lactate dehydrogenase GO:0004459|GO:0005737|GO:0055114 KEGG: 00010+1.1.1.27|KEGG: 00270+1.1.1.27|KEGG: 00620+1.1.1.27|KEGG: 00640+1.1.1.27|MetaCyc: PWY-5481|MetaCyc: PWY-6901|Reactome: R-HSA-70268 GYO_4551 ea96da9ce651b8e06c07064f01813f62 321 SUPERFAMILY SSF56327 147 312 3.6E-60 T 14-10-2018 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 GYO_4551 ea96da9ce651b8e06c07064f01813f62 321 Pfam PF00056 lactate/malate dehydrogenase, NAD binding domain 8 146 1.3E-49 T 14-10-2018 IPR001236 Lactate/malate dehydrogenase, N-terminal GO:0016491|GO:0055114 GYO_4551 ea96da9ce651b8e06c07064f01813f62 321 PRINTS PR00086 L-lactate dehydrogenase signature 8 32 7.9E-51 T 14-10-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 GYO_4551 ea96da9ce651b8e06c07064f01813f62 321 PRINTS PR00086 L-lactate dehydrogenase signature 33 57 7.9E-51 T 14-10-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 GYO_4551 ea96da9ce651b8e06c07064f01813f62 321 PRINTS PR00086 L-lactate dehydrogenase signature 174 187 7.9E-51 T 14-10-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 GYO_4551 ea96da9ce651b8e06c07064f01813f62 321 PRINTS PR00086 L-lactate dehydrogenase signature 144 162 7.9E-51 T 14-10-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 GYO_4551 ea96da9ce651b8e06c07064f01813f62 321 PRINTS PR00086 L-lactate dehydrogenase signature 120 140 7.9E-51 T 14-10-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 GYO_4551 ea96da9ce651b8e06c07064f01813f62 321 Gene3D G3DSA:3.40.50.720 1 148 6.8E-58 T 14-10-2018 GYO_4551 ea96da9ce651b8e06c07064f01813f62 321 SUPERFAMILY SSF51735 2 146 2.8E-55 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily GYO_4551 ea96da9ce651b8e06c07064f01813f62 321 TIGRFAM TIGR01771 L-LDH-NAD: L-lactate dehydrogenase 11 309 1.0E-132 T 14-10-2018 IPR011304 L-lactate dehydrogenase GO:0004459|GO:0005737|GO:0055114 KEGG: 00010+1.1.1.27|KEGG: 00270+1.1.1.27|KEGG: 00620+1.1.1.27|KEGG: 00640+1.1.1.27|MetaCyc: PWY-5481|MetaCyc: PWY-6901|Reactome: R-HSA-70268 GYO_4551 ea96da9ce651b8e06c07064f01813f62 321 ProSitePatterns PS00064 L-lactate dehydrogenase active site. 176 182 - T 14-10-2018 IPR018177 L-lactate dehydrogenase, active site GO:0004459|GO:0055114 KEGG: 00010+1.1.1.27|KEGG: 00270+1.1.1.27|KEGG: 00620+1.1.1.27|KEGG: 00640+1.1.1.27|MetaCyc: PWY-5481|MetaCyc: PWY-6901|Reactome: R-HSA-70268 GYO_4551 ea96da9ce651b8e06c07064f01813f62 321 Pfam PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain 149 317 3.4E-44 T 14-10-2018 IPR022383 Lactate/malate dehydrogenase, C-terminal GO:0016616|GO:0055114 GYO_4551 ea96da9ce651b8e06c07064f01813f62 321 Gene3D G3DSA:3.90.110.10 149 314 8.9E-69 T 14-10-2018 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 GYO_1680 5045d160fbf3e12eddcaa0bce8951f2a 165 TIGRFAM TIGR00589 ogt: methylated-DNA--[protein]-cysteine S-methyltransferase 78 158 1.3E-35 T 14-10-2018 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 GYO_1680 5045d160fbf3e12eddcaa0bce8951f2a 165 SUPERFAMILY SSF46767 77 160 1.7E-29 T 14-10-2018 IPR036217 Methylated DNA-protein cysteine methyltransferase, DNA binding domain Reactome: R-HSA-5657655 GYO_1680 5045d160fbf3e12eddcaa0bce8951f2a 165 Pfam PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain 1 75 1.8E-21 T 14-10-2018 IPR008332 Methylguanine DNA methyltransferase, ribonuclease-like domain GO:0003908|GO:0006281 Reactome: R-HSA-5657655 GYO_1680 5045d160fbf3e12eddcaa0bce8951f2a 165 Gene3D G3DSA:3.30.160.70 1 73 9.9E-19 T 14-10-2018 GYO_1680 5045d160fbf3e12eddcaa0bce8951f2a 165 Hamap MF_00772 Methylated-DNA--protein-cysteine methyltransferase [ogt]. 6 159 43.478 T 14-10-2018 IPR023546 Methylated-DNA--protein-cysteine methyltransferase GO:0003824|GO:0006281 GYO_1680 5045d160fbf3e12eddcaa0bce8951f2a 165 SUPERFAMILY SSF53155 3 83 2.16E-18 T 14-10-2018 IPR036631 Methylated DNA-protein cysteine methyltransferase domain superfamily GO:0003908|GO:0006281 Reactome: R-HSA-5657655 GYO_1680 5045d160fbf3e12eddcaa0bce8951f2a 165 ProSitePatterns PS00374 Methylated-DNA--protein-cysteine methyltransferase active site. 128 134 - T 14-10-2018 IPR001497 Methylated-DNA-[protein]-cysteine S-methyltransferase, active site GO:0003908|GO:0006281 Reactome: R-HSA-5657655 GYO_1680 5045d160fbf3e12eddcaa0bce8951f2a 165 Gene3D G3DSA:1.10.10.10 75 160 2.2E-32 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily GYO_1680 5045d160fbf3e12eddcaa0bce8951f2a 165 Pfam PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain 79 159 8.8E-29 T 14-10-2018 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 GYO_0596 cee1a0556de6ab225863269d6ca9a1bb 316 Pfam PF01032 FecCD transport family 9 311 3.5E-64 T 14-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 GYO_0596 cee1a0556de6ab225863269d6ca9a1bb 316 SUPERFAMILY SSF81345 3 312 2.35E-66 T 14-10-2018 IPR037294 ABC transporter, BtuC-like GYO_0596 cee1a0556de6ab225863269d6ca9a1bb 316 Gene3D G3DSA:1.10.3470.10 1 315 8.3E-61 T 14-10-2018 IPR037294 ABC transporter, BtuC-like GYO_1830 3dc3fdc987dcf005e1ac02eb9d900135 306 Pfam PF02628 Cytochrome oxidase assembly protein 54 289 7.9E-29 T 14-10-2018 IPR003780 COX15/CtaA family GO:0006784|GO:0016021|GO:0016627|GO:0055114 Reactome: R-HSA-189451 GYO_1830 3dc3fdc987dcf005e1ac02eb9d900135 306 Hamap MF_01664 Heme A synthase [ctaA]. 1 304 29.258 T 14-10-2018 IPR023755 Heme A synthase, type 1 GO:0006784|GO:0016020|GO:0016627|GO:0055114 GYO_3028 e1e370db88c54c5b0d16acaab7297216 400 Gene3D G3DSA:3.90.1150.10 7 374 4.1E-119 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 GYO_3028 e1e370db88c54c5b0d16acaab7297216 400 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 196 215 - T 14-10-2018 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site GYO_3028 e1e370db88c54c5b0d16acaab7297216 400 SUPERFAMILY SSF53383 6 379 2.24E-88 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase GYO_3028 e1e370db88c54c5b0d16acaab7297216 400 Gene3D G3DSA:1.10.260.50 18 282 4.1E-119 T 14-10-2018 GYO_3028 e1e370db88c54c5b0d16acaab7297216 400 Pfam PF00266 Aminotransferase class-V 7 371 8.9E-91 T 14-10-2018 IPR000192 Aminotransferase class V domain GYO_3028 e1e370db88c54c5b0d16acaab7297216 400 Gene3D G3DSA:3.40.640.10 64 238 4.1E-119 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 GYO_3028 e1e370db88c54c5b0d16acaab7297216 400 PIRSF PIRSF005572 4 386 1.2E-130 T 14-10-2018 IPR016454 Cysteine desulfurase KEGG: 00730+2.8.1.7|MetaCyc: PWY-7250 GYO_1874 e2d0a74c2ed5b7352cc7b595955a212c 440 PIRSF PIRSF003101 1 439 6.9E-149 T 14-10-2018 IPR020823 Cell division protein FtsA GYO_1874 e2d0a74c2ed5b7352cc7b595955a212c 440 Gene3D G3DSA:3.30.1490.110 83 167 3.0E-110 T 14-10-2018 GYO_1874 e2d0a74c2ed5b7352cc7b595955a212c 440 SUPERFAMILY SSF53067 5 195 1.3E-58 T 14-10-2018 GYO_1874 e2d0a74c2ed5b7352cc7b595955a212c 440 Gene3D G3DSA:3.30.420.40 10 363 3.0E-110 T 14-10-2018 GYO_1874 e2d0a74c2ed5b7352cc7b595955a212c 440 Gene3D G3DSA:3.90.640.10 233 298 3.0E-110 T 14-10-2018 GYO_1874 e2d0a74c2ed5b7352cc7b595955a212c 440 SMART SM00842 7 194 4.7E-90 T 14-10-2018 IPR003494 SHS2 domain inserted in FtsA GO:0005515|GO:0051301 GYO_1874 e2d0a74c2ed5b7352cc7b595955a212c 440 Pfam PF14450 Cell division protein FtsA 9 187 9.5E-10 T 14-10-2018 GYO_1874 e2d0a74c2ed5b7352cc7b595955a212c 440 Gene3D G3DSA:3.30.420.40 195 349 3.0E-110 T 14-10-2018 GYO_1874 e2d0a74c2ed5b7352cc7b595955a212c 440 SUPERFAMILY SSF53067 197 368 4.01E-43 T 14-10-2018 GYO_1874 e2d0a74c2ed5b7352cc7b595955a212c 440 Hamap MF_02033 Cell division protein FtsA [ftsA]. 3 439 30.095 T 14-10-2018 IPR020823 Cell division protein FtsA GYO_1874 e2d0a74c2ed5b7352cc7b595955a212c 440 Pfam PF14450 Cell division protein FtsA 205 366 4.8E-25 T 14-10-2018 GYO_1874 e2d0a74c2ed5b7352cc7b595955a212c 440 TIGRFAM TIGR01174 ftsA: cell division protein FtsA 7 369 8.2E-135 T 14-10-2018 IPR020823 Cell division protein FtsA GYO_1874 e2d0a74c2ed5b7352cc7b595955a212c 440 Pfam PF02491 SHS2 domain inserted in FTSA 81 160 2.1E-23 T 14-10-2018 IPR003494 SHS2 domain inserted in FtsA GO:0005515|GO:0051301 GYO_3865 697da3dbc6f3c606e7528a4a0aab7319 275 Gene3D G3DSA:3.30.70.3040 27 135 4.2E-9 T 14-10-2018 GYO_3865 697da3dbc6f3c606e7528a4a0aab7319 275 PIRSF PIRSF003097 1 275 2.8E-93 T 14-10-2018 IPR004513 Cell division protein FtsX GO:0016021 GYO_3865 697da3dbc6f3c606e7528a4a0aab7319 275 Pfam PF02687 FtsX-like permease family 178 273 1.5E-8 T 14-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 GYO_3222 2c41e0c6a71a6d6ff7b49459dbf1b388 283 Gene3D G3DSA:3.40.50.2300 13 260 7.8E-98 T 14-10-2018 GYO_3222 2c41e0c6a71a6d6ff7b49459dbf1b388 283 Pfam PF13377 Periplasmic binding protein-like domain 120 281 3.7E-35 T 14-10-2018 GYO_3222 2c41e0c6a71a6d6ff7b49459dbf1b388 283 SUPERFAMILY SSF53822 12 282 4.91E-88 T 14-10-2018 IPR028082 Periplasmic binding protein-like I GYO_3222 2c41e0c6a71a6d6ff7b49459dbf1b388 283 Gene3D G3DSA:3.40.50.2300 111 241 7.8E-98 T 14-10-2018 GYO_4360 55f57947d8f2a631558814d2bf7c24e6 441 PIRSF PIRSF000337 3 441 4.4E-167 T 14-10-2018 IPR016215 Nitrilotriacetate monooxygenase component A/pristinamycin IIA synthase subunit A GO:0004497 GYO_4360 55f57947d8f2a631558814d2bf7c24e6 441 TIGRFAM TIGR03860 FMN_nitrolo: FMN-dependent oxidoreductase, nitrilotriacetate monooxygenase family 10 429 1.4E-187 T 14-10-2018 IPR016215 Nitrilotriacetate monooxygenase component A/pristinamycin IIA synthase subunit A GO:0004497 GYO_4360 55f57947d8f2a631558814d2bf7c24e6 441 Gene3D G3DSA:3.20.20.30 1 441 2.9E-171 T 14-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 GYO_4360 55f57947d8f2a631558814d2bf7c24e6 441 SUPERFAMILY SSF51679 5 435 3.01E-143 T 14-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 GYO_4360 55f57947d8f2a631558814d2bf7c24e6 441 Pfam PF00296 Luciferase-like monooxygenase 19 382 1.4E-81 T 14-10-2018 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 GYO_2156 3321d6cf705c97c9853c0569ea4ee757 667 SMART SM00861 354 525 8.3E-71 T 14-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain GYO_2156 3321d6cf705c97c9853c0569ea4ee757 667 Gene3D G3DSA:3.40.50.970 333 537 6.5E-80 T 14-10-2018 GYO_2156 3321d6cf705c97c9853c0569ea4ee757 667 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 5 338 9.8E-152 T 14-10-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 GYO_2156 3321d6cf705c97c9853c0569ea4ee757 667 TIGRFAM TIGR00232 tktlase_bact: transketolase 6 666 0.0 T 14-10-2018 IPR005478 Transketolase, bacterial-like GO:0004802 KEGG: 00030+2.2.1.1|KEGG: 00710+2.2.1.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|MetaCyc: PWY-6901 GYO_2156 3321d6cf705c97c9853c0569ea4ee757 667 ProSitePatterns PS00802 Transketolase signature 2. 467 483 - T 14-10-2018 IPR020826 Transketolase binding site KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 GYO_2156 3321d6cf705c97c9853c0569ea4ee757 667 SUPERFAMILY SSF52518 4 325 6.63E-116 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold GYO_2156 3321d6cf705c97c9853c0569ea4ee757 667 Gene3D G3DSA:3.40.50.970 1 332 2.8E-124 T 14-10-2018 GYO_2156 3321d6cf705c97c9853c0569ea4ee757 667 SUPERFAMILY SSF52518 341 527 5.16E-69 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold GYO_2156 3321d6cf705c97c9853c0569ea4ee757 667 SUPERFAMILY SSF52922 531 667 4.97E-41 T 14-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 GYO_2156 3321d6cf705c97c9853c0569ea4ee757 667 Pfam PF02779 Transketolase, pyrimidine binding domain 354 524 1.1E-44 T 14-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain GYO_2156 3321d6cf705c97c9853c0569ea4ee757 667 ProSitePatterns PS00801 Transketolase signature 1. 13 33 - T 14-10-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 GYO_2156 3321d6cf705c97c9853c0569ea4ee757 667 Gene3D G3DSA:3.40.50.920 540 667 3.7E-42 T 14-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 GYO_2156 3321d6cf705c97c9853c0569ea4ee757 667 Pfam PF02780 Transketolase, C-terminal domain 548 657 1.6E-14 T 14-10-2018 IPR033248 Transketolase, C-terminal domain GYO_2853 a9062cc1d1060249bf56d06ac3f03929 124 SUPERFAMILY SSF55298 10 124 2.04E-29 T 14-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 GYO_2853 a9062cc1d1060249bf56d06ac3f03929 124 Gene3D G3DSA:3.30.1330.40 2 124 2.0E-32 T 14-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 GYO_2853 a9062cc1d1060249bf56d06ac3f03929 124 Pfam PF01042 Endoribonuclease L-PSP 10 123 3.1E-26 T 14-10-2018 IPR006175 YjgF/YER057c/UK114 family Reactome: R-HSA-8849175 GYO_1701 d9029ebc1e1694131297aca588564237 219 Pfam PF06508 Queuosine biosynthesis protein QueC 5 211 1.6E-87 T 14-10-2018 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703 GYO_1701 d9029ebc1e1694131297aca588564237 219 Hamap MF_01633 7-cyano-7-deazaguanine synthase [queC]. 4 217 50.575 T 14-10-2018 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703 GYO_1701 d9029ebc1e1694131297aca588564237 219 Gene3D G3DSA:3.40.50.620 1 219 2.3E-78 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold GYO_1701 d9029ebc1e1694131297aca588564237 219 SUPERFAMILY SSF52402 3 211 5.51E-66 T 14-10-2018 GYO_1701 d9029ebc1e1694131297aca588564237 219 TIGRFAM TIGR00364 TIGR00364: queuosine biosynthesis protein QueC 6 204 6.2E-90 T 14-10-2018 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703 GYO_1701 d9029ebc1e1694131297aca588564237 219 PIRSF PIRSF006293 2 218 3.2E-79 T 14-10-2018 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703 GYO_2526 c215dae2a0a2f9ed6ed7d00d2cb7f91f 218 PIRSF PIRSF016933 1 218 1.3E-89 T 14-10-2018 IPR023596 Peptidase PrsW, archaeal/bacterial GO:0008233 GYO_2526 c215dae2a0a2f9ed6ed7d00d2cb7f91f 218 Pfam PF13367 Protease prsW family 28 198 1.1E-32 T 14-10-2018 IPR026898 Protease PrsW GO:0008233 GYO_2711 472d3e1a868c1040e7488872fef74f59 291 SUPERFAMILY SSF52151 6 289 1.6E-43 T 14-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GYO_2711 472d3e1a868c1040e7488872fef74f59 291 Gene3D G3DSA:3.40.1090.10 2 116 1.9E-25 T 14-10-2018 GYO_2711 472d3e1a868c1040e7488872fef74f59 291 Gene3D G3DSA:3.40.1090.10 117 289 5.2E-20 T 14-10-2018 GYO_2711 472d3e1a868c1040e7488872fef74f59 291 Pfam PF01734 Patatin-like phospholipase 6 195 1.2E-29 T 14-10-2018 IPR002641 Patatin-like phospholipase domain GO:0006629 GYO_3403 b95dceabfae95f8f066948bc8d42dfd9 486 SUPERFAMILY SSF53067 3 242 1.29E-46 T 14-10-2018 GYO_3403 b95dceabfae95f8f066948bc8d42dfd9 486 Gene3D G3DSA:3.30.420.40 2 233 6.5E-79 T 14-10-2018 GYO_3403 b95dceabfae95f8f066948bc8d42dfd9 486 Hamap MF_01535 Rhamnulokinase [rhaB]. 3 480 55.176 T 14-10-2018 IPR013449 Rhamnulokinase GO:0008993|GO:0019301 KEGG: 00040+2.7.1.5|KEGG: 00051+2.7.1.5 GYO_3403 b95dceabfae95f8f066948bc8d42dfd9 486 PIRSF PIRSF000538 1 485 3.6E-46 T 14-10-2018 IPR000577 Carbohydrate kinase, FGGY GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 GYO_3403 b95dceabfae95f8f066948bc8d42dfd9 486 SUPERFAMILY SSF53067 245 464 5.05E-35 T 14-10-2018 GYO_3403 b95dceabfae95f8f066948bc8d42dfd9 486 TIGRFAM TIGR02627 rhamnulo_kin: rhamnulokinase 5 458 2.0E-186 T 14-10-2018 IPR013449 Rhamnulokinase GO:0008993|GO:0019301 KEGG: 00040+2.7.1.5|KEGG: 00051+2.7.1.5 GYO_3403 b95dceabfae95f8f066948bc8d42dfd9 486 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 250 439 1.7E-21 T 14-10-2018 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 GYO_3403 b95dceabfae95f8f066948bc8d42dfd9 486 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 3 240 2.4E-37 T 14-10-2018 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 GYO_3403 b95dceabfae95f8f066948bc8d42dfd9 486 Gene3D G3DSA:3.30.420.40 234 484 4.7E-97 T 14-10-2018 GYO_1799 451d5994c8c93b65877d2e4de167de34 442 SUPERFAMILY SSF52777 201 440 3.69E-89 T 14-10-2018 GYO_1799 451d5994c8c93b65877d2e4de167de34 442 SUPERFAMILY SSF51230 3 92 4.45E-25 T 14-10-2018 IPR011053 Single hybrid motif GYO_1799 451d5994c8c93b65877d2e4de167de34 442 Gene3D G3DSA:4.10.320.10 129 182 4.4E-22 T 14-10-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 GYO_1799 451d5994c8c93b65877d2e4de167de34 442 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 27 56 - T 14-10-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 GYO_1799 451d5994c8c93b65877d2e4de167de34 442 Pfam PF02817 e3 binding domain 140 174 7.2E-15 T 14-10-2018 IPR004167 Peripheral subunit-binding domain GO:0016746 Reactome: R-HSA-389661 GYO_1799 451d5994c8c93b65877d2e4de167de34 442 Gene3D G3DSA:3.30.559.10 194 439 6.8E-91 T 14-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 GYO_1799 451d5994c8c93b65877d2e4de167de34 442 SUPERFAMILY SSF47005 134 180 1.44E-13 T 14-10-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 GYO_1799 451d5994c8c93b65877d2e4de167de34 442 Pfam PF00364 Biotin-requiring enzyme 4 75 4.2E-22 T 14-10-2018 IPR000089 Biotin/lipoyl attachment GYO_1799 451d5994c8c93b65877d2e4de167de34 442 Gene3D G3DSA:2.40.50.100 2 81 2.0E-25 T 14-10-2018 GYO_1799 451d5994c8c93b65877d2e4de167de34 442 Pfam PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 212 440 5.5E-89 T 14-10-2018 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain GO:0016746 Reactome: R-HSA-389661 GYO_3098 1b7382d7887d0fcdebf832f3e94d2afd 495 SUPERFAMILY SSF51011 357 491 2.52E-32 T 14-10-2018 GYO_3098 1b7382d7887d0fcdebf832f3e94d2afd 495 Gene3D G3DSA:2.60.40.1180 14 489 1.1E-196 T 14-10-2018 IPR013780 Glycosyl hydrolase, all-beta GYO_3098 1b7382d7887d0fcdebf832f3e94d2afd 495 SUPERFAMILY SSF51445 17 376 4.57E-98 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily GYO_3098 1b7382d7887d0fcdebf832f3e94d2afd 495 Pfam PF06964 Alpha-L-arabinofuranosidase C-terminal domain 294 485 7.8E-44 T 14-10-2018 IPR010720 Alpha-L-arabinofuranosidase, C-terminal GO:0046373|GO:0046556 KEGG: 00520+3.2.1.55 GYO_3098 1b7382d7887d0fcdebf832f3e94d2afd 495 SMART SM00813 294 485 6.2E-88 T 14-10-2018 IPR010720 Alpha-L-arabinofuranosidase, C-terminal GO:0046373|GO:0046556 KEGG: 00520+3.2.1.55 GYO_3098 1b7382d7887d0fcdebf832f3e94d2afd 495 Gene3D G3DSA:3.20.20.80 18 376 1.1E-196 T 14-10-2018 GYO_0864 f1ed5bd02a5d08166c7f5e26ae4982e8 63 ProDom PD053380 YDIK LIPOPROTEIN TRANSMEMBRANE MEMBRANE PRECURSOR PALMITATE SIGNAL 1 63 1.0E-29 T 14-10-2018 GYO_0864 f1ed5bd02a5d08166c7f5e26ae4982e8 63 Pfam PF14146 Domain of unknown function (DUF4305) 17 52 6.8E-13 T 14-10-2018 IPR025426 Protein of unknown function DUF4305 GYO_2948 883fae2c49d76e7b8bd33f89dfa73a36 275 SUPERFAMILY SSF56024 110 179 4.32E-7 T 14-10-2018 GYO_2948 883fae2c49d76e7b8bd33f89dfa73a36 275 Gene3D G3DSA:3.30.870.10 76 194 3.2E-6 T 14-10-2018 GYO_2948 883fae2c49d76e7b8bd33f89dfa73a36 275 Gene3D G3DSA:1.10.10.10 1 73 1.5E-21 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily GYO_2948 883fae2c49d76e7b8bd33f89dfa73a36 275 SUPERFAMILY SSF46785 3 96 2.82E-5 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily GYO_2948 883fae2c49d76e7b8bd33f89dfa73a36 275 Pfam PF11495 Archaeal transcriptional regulator TrmB 110 172 9.8E-8 T 14-10-2018 IPR021586 Transcription regulator TrmB, C-terminal GYO_2948 883fae2c49d76e7b8bd33f89dfa73a36 275 Pfam PF01978 Sugar-specific transcriptional regulator TrmB 9 75 1.7E-21 T 14-10-2018 IPR002831 Transcription regulator TrmB, N-terminal GYO_2588 b58b8cdc44850ddae75a1ab371fa3819 149 Pfam PF01475 Ferric uptake regulator family 15 136 2.4E-40 T 14-10-2018 IPR002481 Ferric-uptake regulator GO:0003700|GO:0006355 GYO_2588 b58b8cdc44850ddae75a1ab371fa3819 149 Gene3D G3DSA:1.10.10.10 1 88 6.1E-29 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily GYO_2588 b58b8cdc44850ddae75a1ab371fa3819 149 Gene3D G3DSA:3.30.1490.190 93 149 1.1E-16 T 14-10-2018 GYO_2588 b58b8cdc44850ddae75a1ab371fa3819 149 SUPERFAMILY SSF46785 7 141 2.24E-38 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily GYO_1322 e112ca720a7a0494a87973df3dfc945f 244 SMART SM00849 18 211 3.1E-13 T 14-10-2018 IPR001279 Metallo-beta-lactamase GYO_1322 e112ca720a7a0494a87973df3dfc945f 244 Gene3D G3DSA:3.60.15.10 1 244 9.4E-82 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like GYO_1322 e112ca720a7a0494a87973df3dfc945f 244 SUPERFAMILY SSF56281 1 242 3.41E-50 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like GYO_1322 e112ca720a7a0494a87973df3dfc945f 244 Pfam PF12706 Beta-lactamase superfamily domain 31 211 1.2E-17 T 14-10-2018 IPR001279 Metallo-beta-lactamase GYO_0038 014365ae2cdd398adf90aa8204aff9a4 109 Gene3D G3DSA:3.30.70.120 1 103 2.2E-44 T 14-10-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal GYO_0038 014365ae2cdd398adf90aa8204aff9a4 109 SUPERFAMILY SSF54913 1 107 7.04E-12 T 14-10-2018 IPR011322 Nitrogen regulatory PII-like, alpha/beta GYO_0038 014365ae2cdd398adf90aa8204aff9a4 109 Pfam PF06153 Cyclic-di-AMP receptor 1 109 4.5E-55 T 14-10-2018 IPR010375 Cyclic-di-AMP receptor GYO_4213 180a1d1898df794bcf7b18829dd075e0 390 Hamap MF_00246 Galactokinase [galK]. 24 386 48.429 T 14-10-2018 IPR022963 Galactokinase, bacterial GO:0004335|GO:0006012 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 GYO_4213 180a1d1898df794bcf7b18829dd075e0 390 SUPERFAMILY SSF55060 205 385 7.2E-53 T 14-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily GYO_4213 180a1d1898df794bcf7b18829dd075e0 390 Pfam PF08544 GHMP kinases C terminal 288 352 2.0E-9 T 14-10-2018 IPR013750 GHMP kinase, C-terminal domain GYO_4213 180a1d1898df794bcf7b18829dd075e0 390 PRINTS PR00473 Galactokinase signature 91 102 1.8E-27 T 14-10-2018 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 GYO_4213 180a1d1898df794bcf7b18829dd075e0 390 PRINTS PR00473 Galactokinase signature 26 44 1.8E-27 T 14-10-2018 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 GYO_4213 180a1d1898df794bcf7b18829dd075e0 390 PRINTS PR00473 Galactokinase signature 112 130 1.8E-27 T 14-10-2018 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 GYO_4213 180a1d1898df794bcf7b18829dd075e0 390 PRINTS PR00473 Galactokinase signature 269 283 1.8E-27 T 14-10-2018 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 GYO_4213 180a1d1898df794bcf7b18829dd075e0 390 SUPERFAMILY SSF54211 3 202 6.6E-62 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold GYO_4213 180a1d1898df794bcf7b18829dd075e0 390 ProSitePatterns PS00627 GHMP kinases putative ATP-binding domain. 121 132 - T 14-10-2018 IPR006203 GHMP kinase, ATP-binding, conserved site GO:0005524 GYO_4213 180a1d1898df794bcf7b18829dd075e0 390 TIGRFAM TIGR00131 gal_kin: galactokinase 3 386 2.5E-168 T 14-10-2018 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 GYO_4213 180a1d1898df794bcf7b18829dd075e0 390 PRINTS PR00959 Mevalonate kinase family signature 333 350 2.5E-43 T 14-10-2018 GYO_4213 180a1d1898df794bcf7b18829dd075e0 390 PRINTS PR00959 Mevalonate kinase family signature 24 48 2.5E-43 T 14-10-2018 GYO_4213 180a1d1898df794bcf7b18829dd075e0 390 PRINTS PR00959 Mevalonate kinase family signature 162 181 2.5E-43 T 14-10-2018 GYO_4213 180a1d1898df794bcf7b18829dd075e0 390 PRINTS PR00959 Mevalonate kinase family signature 119 141 2.5E-43 T 14-10-2018 GYO_4213 180a1d1898df794bcf7b18829dd075e0 390 ProSitePatterns PS00106 Galactokinase signature. 26 37 - T 14-10-2018 IPR019741 Galactokinase, conserved site KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 GYO_4213 180a1d1898df794bcf7b18829dd075e0 390 PIRSF PIRSF000530 1 388 4.1E-119 T 14-10-2018 IPR006206 Mevalonate/galactokinase GO:0005524|GO:0005737|GO:0016301|GO:0016773 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 GYO_4213 180a1d1898df794bcf7b18829dd075e0 390 Pfam PF00288 GHMP kinases N terminal domain 114 181 1.2E-13 T 14-10-2018 IPR006204 GHMP kinase N-terminal domain GO:0005524 GYO_4213 180a1d1898df794bcf7b18829dd075e0 390 Pfam PF10509 Galactokinase galactose-binding signature 9 56 4.1E-22 T 14-10-2018 IPR019539 Galactokinase galactose-binding domain GO:0005534 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 GYO_4213 180a1d1898df794bcf7b18829dd075e0 390 Gene3D G3DSA:3.30.70.890 202 361 1.9E-134 T 14-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily GYO_4213 180a1d1898df794bcf7b18829dd075e0 390 Gene3D G3DSA:3.30.230.10 21 201 1.9E-134 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup GYO_2993 2d81833e77e6466ec41041f0a4dfc828 254 Pfam PF00899 ThiF family 6 158 6.5E-40 T 14-10-2018 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 GYO_2993 2d81833e77e6466ec41041f0a4dfc828 254 SUPERFAMILY SSF69572 4 244 1.57E-62 T 14-10-2018 IPR035985 Ubiquitin-activating enzyme GO:0008641 GYO_2993 2d81833e77e6466ec41041f0a4dfc828 254 Gene3D G3DSA:3.40.50.720 1 254 1.9E-81 T 14-10-2018 GYO_1030 786b930df6758191962639cb4734ca35 91 Gene3D G3DSA:3.30.70.100 1 91 1.7E-35 T 14-10-2018 GYO_1030 786b930df6758191962639cb4734ca35 91 PRINTS PR00112 Acylphosphatase signature 24 49 2.3E-5 T 14-10-2018 IPR020456 Acylphosphatase GO:0003998 KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 GYO_1030 786b930df6758191962639cb4734ca35 91 PRINTS PR00112 Acylphosphatase signature 3 18 2.3E-5 T 14-10-2018 IPR020456 Acylphosphatase GO:0003998 KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 GYO_1030 786b930df6758191962639cb4734ca35 91 Pfam PF00708 Acylphosphatase 5 87 8.6E-28 T 14-10-2018 IPR001792 Acylphosphatase-like domain KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 GYO_1030 786b930df6758191962639cb4734ca35 91 ProSitePatterns PS00151 Acylphosphatase signature 2. 32 48 - T 14-10-2018 IPR017968 Acylphosphatase, conserved site KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 GYO_1030 786b930df6758191962639cb4734ca35 91 SUPERFAMILY SSF54975 2 89 2.09E-27 T 14-10-2018 IPR036046 Acylphosphatase-like domain superfamily KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 GYO_4086 f3c5e65922535a68c9bf333cf4747a51 321 Pfam PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded 3 309 2.2E-141 T 14-10-2018 IPR004464 Fructose-1,6-bisphosphatase class 2/Sedoheputulose-1,7-bisphosphatase GO:0006071|GO:0006094|GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484 GYO_4086 f3c5e65922535a68c9bf333cf4747a51 321 Gene3D G3DSA:3.40.190.90 122 283 2.3E-132 T 14-10-2018 GYO_4086 f3c5e65922535a68c9bf333cf4747a51 321 Gene3D G3DSA:3.30.540.10 7 309 2.3E-132 T 14-10-2018 GYO_4086 f3c5e65922535a68c9bf333cf4747a51 321 PIRSF PIRSF004532 1 320 1.5E-150 T 14-10-2018 IPR004464 Fructose-1,6-bisphosphatase class 2/Sedoheputulose-1,7-bisphosphatase GO:0006071|GO:0006094|GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484 GYO_4086 f3c5e65922535a68c9bf333cf4747a51 321 TIGRFAM TIGR00330 glpX: fructose-1,6-bisphosphatase, class II 1 320 1.7E-165 T 14-10-2018 IPR004464 Fructose-1,6-bisphosphatase class 2/Sedoheputulose-1,7-bisphosphatase GO:0006071|GO:0006094|GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484 GYO_4086 f3c5e65922535a68c9bf333cf4747a51 321 SUPERFAMILY SSF56655 1 312 2.2E-110 T 14-10-2018 GYO_4199 8d82fff4bd59e9680a191e76e05b9672 806 Pfam PF05922 Peptidase inhibitor I9 57 142 3.5E-10 T 14-10-2018 IPR010259 Peptidase S8 propeptide/proteinase inhibitor I9 Reactome: R-HSA-381426|Reactome: R-HSA-8866427|Reactome: R-HSA-8957275|Reactome: R-HSA-8964038 GYO_4199 8d82fff4bd59e9680a191e76e05b9672 806 Gene3D G3DSA:3.30.70.80 49 142 5.7E-6 T 14-10-2018 IPR037045 Peptidase S8 propeptide/proteinase inhibitor I9 superfamily Reactome: R-HSA-381426|Reactome: R-HSA-8866427|Reactome: R-HSA-8957275|Reactome: R-HSA-8964038 GYO_4199 8d82fff4bd59e9680a191e76e05b9672 806 Pfam PF02225 PA domain 383 461 1.7E-13 T 14-10-2018 IPR003137 PA domain GYO_4199 8d82fff4bd59e9680a191e76e05b9672 806 SUPERFAMILY SSF52025 376 469 1.83E-19 T 14-10-2018 GYO_4199 8d82fff4bd59e9680a191e76e05b9672 806 Pfam PF13860 FlgD Ig-like domain 718 791 4.9E-8 T 14-10-2018 IPR025965 FlgD Ig-like domain GYO_4199 8d82fff4bd59e9680a191e76e05b9672 806 PRINTS PR00723 Subtilisin serine protease family (S8) signature 180 199 5.7E-21 T 14-10-2018 IPR015500 Peptidase S8, subtilisin-related GYO_4199 8d82fff4bd59e9680a191e76e05b9672 806 PRINTS PR00723 Subtilisin serine protease family (S8) signature 229 242 5.7E-21 T 14-10-2018 IPR015500 Peptidase S8, subtilisin-related GYO_4199 8d82fff4bd59e9680a191e76e05b9672 806 PRINTS PR00723 Subtilisin serine protease family (S8) signature 531 547 5.7E-21 T 14-10-2018 IPR015500 Peptidase S8, subtilisin-related GYO_4199 8d82fff4bd59e9680a191e76e05b9672 806 Gene3D G3DSA:3.50.30.30 358 479 1.6E-28 T 14-10-2018 GYO_4199 8d82fff4bd59e9680a191e76e05b9672 806 ProSitePatterns PS00138 Serine proteases, subtilase family, serine active site. 532 542 - T 14-10-2018 IPR023828 Peptidase S8, subtilisin, Ser-active site GYO_4199 8d82fff4bd59e9680a191e76e05b9672 806 ProSitePatterns PS00137 Serine proteases, subtilase family, histidine active site. 233 243 - T 14-10-2018 IPR022398 Peptidase S8, subtilisin, His-active site GYO_4199 8d82fff4bd59e9680a191e76e05b9672 806 Gene3D G3DSA:2.60.40.4070 716 799 6.6E-7 T 14-10-2018 GYO_4199 8d82fff4bd59e9680a191e76e05b9672 806 SUPERFAMILY SSF52743 161 596 2.62E-83 T 14-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 GYO_4199 8d82fff4bd59e9680a191e76e05b9672 806 Pfam PF00082 Subtilase family 180 586 1.7E-82 T 14-10-2018 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 GYO_4199 8d82fff4bd59e9680a191e76e05b9672 806 ProSitePatterns PS00136 Serine proteases, subtilase family, aspartic acid active site. 185 196 - T 14-10-2018 IPR023827 Peptidase S8, subtilisin, Asp-active site GYO_3922 b60749e785e46df024491b08dd2b372b 421 Pfam PF09318 Glycosyl transferase 1 domain A 20 139 5.0E-13 T 14-10-2018 IPR015397 Glycosyl transferase 1, domain A GYO_4324 2c79174fe6abf3e6cd5df9f5a85b6bf1 179 Pfam PF11193 Protein of unknown function (DUF2812) 11 112 1.3E-23 T 14-10-2018 IPR021359 Protein of unknown function DUF2812 GYO_4340 3bd2e35ee5024b21466c29f4413ec572 329 SUPERFAMILY SSF51735 4 153 2.01E-47 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily GYO_4340 3bd2e35ee5024b21466c29f4413ec572 329 Gene3D G3DSA:3.40.50.720 1 141 2.7E-40 T 14-10-2018 GYO_4340 3bd2e35ee5024b21466c29f4413ec572 329 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 4 120 7.5E-25 T 14-10-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 GYO_4340 3bd2e35ee5024b21466c29f4413ec572 329 Gene3D G3DSA:3.30.360.10 145 322 1.7E-43 T 14-10-2018 GYO_4340 3bd2e35ee5024b21466c29f4413ec572 329 SUPERFAMILY SSF55347 127 290 2.13E-39 T 14-10-2018 GYO_1682 89448ca3127b197652e12dbf08a7ad47 353 Hamap MF_01678 Putative methylthioribose-1-phosphate isomerase [mtnA]. 7 347 38.866 T 14-10-2018 IPR005251 Methylthioribose-1-phosphate isomerase GO:0044249 KEGG: 00270+5.3.1.23|MetaCyc: PWY-4361|MetaCyc: PWY-7174|Reactome: R-HSA-1237112 GYO_1682 89448ca3127b197652e12dbf08a7ad47 353 SUPERFAMILY SSF100950 5 340 2.43E-118 T 14-10-2018 IPR037171 NagB/RpiA transferase-like GYO_1682 89448ca3127b197652e12dbf08a7ad47 353 TIGRFAM TIGR00512 salvage_mtnA: S-methyl-5-thioribose-1-phosphate isomerase 9 336 2.6E-143 T 14-10-2018 IPR005251 Methylthioribose-1-phosphate isomerase GO:0044249 KEGG: 00270+5.3.1.23|MetaCyc: PWY-4361|MetaCyc: PWY-7174|Reactome: R-HSA-1237112 GYO_1682 89448ca3127b197652e12dbf08a7ad47 353 Pfam PF01008 Initiation factor 2 subunit family 49 336 1.1E-97 T 14-10-2018 IPR000649 Initiation factor 2B-related GO:0044237 KEGG: 00270+5.3.1.23|MetaCyc: PWY-4361|MetaCyc: PWY-7174 GYO_1682 89448ca3127b197652e12dbf08a7ad47 353 Gene3D G3DSA:3.40.50.10470 149 353 9.0E-75 T 14-10-2018 GYO_1682 89448ca3127b197652e12dbf08a7ad47 353 Gene3D G3DSA:1.20.120.420 1 148 1.4E-53 T 14-10-2018 IPR027363 Methylthioribose-1-phosphate isomerase, N-terminal KEGG: 00270+5.3.1.23|MetaCyc: PWY-4361|MetaCyc: PWY-7174|Reactome: R-HSA-1237112 GYO_1682 89448ca3127b197652e12dbf08a7ad47 353 TIGRFAM TIGR00524 eIF-2B_rel: eIF-2B alpha/beta/delta-related uncharacterized proteins 36 336 6.4E-140 T 14-10-2018 IPR011559 Initiation factor 2B alpha/beta/delta GO:0044249 KEGG: 00270+5.3.1.23|MetaCyc: PWY-4361|MetaCyc: PWY-7174|Reactome: R-HSA-1237112 GYO_0515 c4e231f7b9b69fe2fdcbae3da1b76977 448 Pfam PF00324 Amino acid permease 21 380 2.4E-45 T 14-10-2018 IPR004841 Amino acid permease/ SLC12A domain GO:0016020|GO:0055085 GYO_0515 c4e231f7b9b69fe2fdcbae3da1b76977 448 Gene3D G3DSA:1.20.1740.10 9 446 4.3E-47 T 14-10-2018 GYO_0515 c4e231f7b9b69fe2fdcbae3da1b76977 448 PIRSF PIRSF006060 1 444 4.8E-44 T 14-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 GYO_0223 a2e80847d904c19fcc84e40026948816 441 Gene3D G3DSA:3.30.420.280 246 417 6.6E-36 T 14-10-2018 GYO_0223 a2e80847d904c19fcc84e40026948816 441 Pfam PF04466 Phage terminase large subunit 20 233 5.3E-82 T 14-10-2018 IPR035412 Phage terminase large subunit, N-terminal GYO_0223 a2e80847d904c19fcc84e40026948816 441 Pfam PF17288 Terminase RNAseH like domain 270 412 5.7E-48 T 14-10-2018 IPR035413 Phage terminase large subunit, C-terminal GYO_0223 a2e80847d904c19fcc84e40026948816 441 TIGRFAM TIGR01547 phage_term_2: phage terminase, large subunit, PBSX family 21 423 2.2E-112 T 14-10-2018 IPR006437 Bacteriophage terminase, large subunit GO:0006323 GYO_0223 a2e80847d904c19fcc84e40026948816 441 Gene3D G3DSA:3.40.50.300 7 234 3.7E-59 T 14-10-2018 GYO_0302 a2e80847d904c19fcc84e40026948816 441 Gene3D G3DSA:3.30.420.280 246 417 6.6E-36 T 14-10-2018 GYO_0302 a2e80847d904c19fcc84e40026948816 441 Pfam PF04466 Phage terminase large subunit 20 233 5.3E-82 T 14-10-2018 IPR035412 Phage terminase large subunit, N-terminal GYO_0302 a2e80847d904c19fcc84e40026948816 441 Pfam PF17288 Terminase RNAseH like domain 270 412 5.7E-48 T 14-10-2018 IPR035413 Phage terminase large subunit, C-terminal GYO_0302 a2e80847d904c19fcc84e40026948816 441 TIGRFAM TIGR01547 phage_term_2: phage terminase, large subunit, PBSX family 21 423 2.2E-112 T 14-10-2018 IPR006437 Bacteriophage terminase, large subunit GO:0006323 GYO_0302 a2e80847d904c19fcc84e40026948816 441 Gene3D G3DSA:3.40.50.300 7 234 3.7E-59 T 14-10-2018 GYO_3727 124eb0d462d3cd7046ecac12965bd803 447 Gene3D G3DSA:1.20.1740.10 6 447 4.1E-68 T 14-10-2018 GYO_3727 124eb0d462d3cd7046ecac12965bd803 447 Pfam PF00324 Amino acid permease 16 436 4.4E-93 T 14-10-2018 IPR004841 Amino acid permease/ SLC12A domain GO:0016020|GO:0055085 GYO_3727 124eb0d462d3cd7046ecac12965bd803 447 PIRSF PIRSF006060 1 446 2.2E-70 T 14-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 GYO_3591 5b7898c5052bffd91335fe3721ed081f 155 Pfam PF01047 MarR family 36 92 9.4E-20 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 GYO_3591 5b7898c5052bffd91335fe3721ed081f 155 Gene3D G3DSA:1.10.287.100 99 155 2.5E-37 T 14-10-2018 GYO_3591 5b7898c5052bffd91335fe3721ed081f 155 SMART SM00347 28 128 4.3E-34 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 GYO_3591 5b7898c5052bffd91335fe3721ed081f 155 SUPERFAMILY SSF46785 7 141 3.49E-30 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily GYO_3591 5b7898c5052bffd91335fe3721ed081f 155 Gene3D G3DSA:1.20.5.420 1 34 8.2E-24 T 14-10-2018 GYO_3591 5b7898c5052bffd91335fe3721ed081f 155 Gene3D G3DSA:1.10.10.10 35 98 1.1E-20 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily GYO_3591 5b7898c5052bffd91335fe3721ed081f 155 PRINTS PR00598 Bacterial regulatory protein MarR family signature 88 104 7.9E-10 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 GYO_3591 5b7898c5052bffd91335fe3721ed081f 155 PRINTS PR00598 Bacterial regulatory protein MarR family signature 118 138 7.9E-10 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 GYO_3591 5b7898c5052bffd91335fe3721ed081f 155 PRINTS PR00598 Bacterial regulatory protein MarR family signature 52 68 7.9E-10 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 GYO_3591 5b7898c5052bffd91335fe3721ed081f 155 PRINTS PR00598 Bacterial regulatory protein MarR family signature 69 84 7.9E-10 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 GYO_3828 cb13a54dcc31ea899d2a6207164b2a97 427 Hamap MF_01024 Histidinol dehydrogenase [hisD]. 1 422 43.084 T 14-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 GYO_3828 cb13a54dcc31ea899d2a6207164b2a97 427 Gene3D G3DSA:3.40.50.1980 27 226 4.0E-128 T 14-10-2018 GYO_3828 cb13a54dcc31ea899d2a6207164b2a97 427 ProSitePatterns PS00611 Histidinol dehydrogenase signature. 224 256 - T 14-10-2018 IPR001692 Histidinol dehydrogenase, conserved site GO:0000105|GO:0004399|GO:0055114 KEGG: 00340+1.1.1.23 GYO_3828 cb13a54dcc31ea899d2a6207164b2a97 427 PIRSF PIRSF000099 1 425 2.6E-171 T 14-10-2018 IPR022695 Histidinol dehydrogenase, monofunctional GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 GYO_3828 cb13a54dcc31ea899d2a6207164b2a97 427 TIGRFAM TIGR00069 hisD: histidinol dehydrogenase 29 421 3.2E-170 T 14-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 GYO_3828 cb13a54dcc31ea899d2a6207164b2a97 427 SUPERFAMILY SSF53720 21 421 1.1E-89 T 14-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 GYO_3828 cb13a54dcc31ea899d2a6207164b2a97 427 Pfam PF00815 Histidinol dehydrogenase 22 421 4.8E-173 T 14-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 GYO_3828 cb13a54dcc31ea899d2a6207164b2a97 427 Gene3D G3DSA:3.40.50.1980 228 344 4.0E-128 T 14-10-2018 GYO_3828 cb13a54dcc31ea899d2a6207164b2a97 427 PRINTS PR00083 Histidinol dehydrogenase signature 165 191 1.5E-89 T 14-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 GYO_3828 cb13a54dcc31ea899d2a6207164b2a97 427 PRINTS PR00083 Histidinol dehydrogenase signature 130 156 1.5E-89 T 14-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 GYO_3828 cb13a54dcc31ea899d2a6207164b2a97 427 PRINTS PR00083 Histidinol dehydrogenase signature 315 340 1.5E-89 T 14-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 GYO_3828 cb13a54dcc31ea899d2a6207164b2a97 427 PRINTS PR00083 Histidinol dehydrogenase signature 29 53 1.5E-89 T 14-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 GYO_3828 cb13a54dcc31ea899d2a6207164b2a97 427 PRINTS PR00083 Histidinol dehydrogenase signature 246 265 1.5E-89 T 14-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 GYO_3828 cb13a54dcc31ea899d2a6207164b2a97 427 PRINTS PR00083 Histidinol dehydrogenase signature 195 220 1.5E-89 T 14-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 GYO_3828 cb13a54dcc31ea899d2a6207164b2a97 427 PRINTS PR00083 Histidinol dehydrogenase signature 356 374 1.5E-89 T 14-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 GYO_3828 cb13a54dcc31ea899d2a6207164b2a97 427 PRINTS PR00083 Histidinol dehydrogenase signature 224 245 1.5E-89 T 14-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 GYO_1002 da4b8eef3d1712f06bc401576c6f08a6 140 Gene3D G3DSA:1.10.1660.10 1 139 2.4E-30 T 14-10-2018 GYO_1002 da4b8eef3d1712f06bc401576c6f08a6 140 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 40 60 7.5E-5 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 GYO_1002 da4b8eef3d1712f06bc401576c6f08a6 140 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 5 16 7.5E-5 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 GYO_1002 da4b8eef3d1712f06bc401576c6f08a6 140 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 16 29 7.5E-5 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 GYO_1002 da4b8eef3d1712f06bc401576c6f08a6 140 SUPERFAMILY SSF46955 4 119 6.59E-24 T 14-10-2018 IPR009061 Putative DNA-binding domain superfamily GYO_1002 da4b8eef3d1712f06bc401576c6f08a6 140 Pfam PF13411 MerR HTH family regulatory protein 4 72 2.3E-19 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 GYO_1002 da4b8eef3d1712f06bc401576c6f08a6 140 SMART SM00422 4 74 2.5E-30 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 GYO_2216 fb4abb4724cce59bf11f6ccd6c326645 1520 Pfam PF01493 GXGXG motif 1245 1433 3.0E-82 T 14-10-2018 IPR002489 Glutamate synthase, alpha subunit, C-terminal GO:0016491|GO:0055114 GYO_2216 fb4abb4724cce59bf11f6ccd6c326645 1520 Pfam PF01645 Conserved region in glutamate synthase 799 1166 1.2E-162 T 14-10-2018 IPR002932 Glutamate synthase domain GO:0006537|GO:0015930|GO:0016638|GO:0055114 GYO_2216 fb4abb4724cce59bf11f6ccd6c326645 1520 Gene3D G3DSA:2.160.20.60 1216 1490 2.2E-109 T 14-10-2018 IPR036485 Glutamate synthase, alpha subunit, C-terminal domain superfamily GO:0016491|GO:0055114 GYO_2216 fb4abb4724cce59bf11f6ccd6c326645 1520 Pfam PF00310 Glutamine amidotransferases class-II 22 438 2.2E-189 T 14-10-2018 IPR017932 Glutamine amidotransferase type 2 domain GYO_2216 fb4abb4724cce59bf11f6ccd6c326645 1520 Gene3D G3DSA:3.20.20.70 490 1183 0.0 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 GYO_2216 fb4abb4724cce59bf11f6ccd6c326645 1520 SUPERFAMILY SSF56235 22 441 2.19E-154 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal GYO_2216 fb4abb4724cce59bf11f6ccd6c326645 1520 SUPERFAMILY SSF51395 457 1204 5.7E-265 T 14-10-2018 GYO_2216 fb4abb4724cce59bf11f6ccd6c326645 1520 Gene3D G3DSA:3.60.20.10 22 552 0.0 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal GYO_2216 fb4abb4724cce59bf11f6ccd6c326645 1520 Pfam PF04898 Glutamate synthase central domain 464 741 7.9E-115 T 14-10-2018 IPR006982 Glutamate synthase, central-N GO:0006807|GO:0015930|GO:0055114 GYO_2216 fb4abb4724cce59bf11f6ccd6c326645 1520 Gene3D G3DSA:3.20.20.70 443 798 0.0 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 GYO_2216 fb4abb4724cce59bf11f6ccd6c326645 1520 SUPERFAMILY SSF69336 1214 1479 3.66E-93 T 14-10-2018 IPR036485 Glutamate synthase, alpha subunit, C-terminal domain superfamily GO:0016491|GO:0055114 GYO_2851 fcce9c55f8e36969fe9eab05517c2ae7 324 ProSitePatterns PS00144 Asparaginase / glutaminase active site signature 1. 8 16 - T 14-10-2018 IPR020827 Asparaginase/glutaminase, active site 1 GO:0006520 GYO_2851 fcce9c55f8e36969fe9eab05517c2ae7 324 PRINTS PR00139 Asparaginase/glutaminase family signature 6 17 2.8E-19 T 14-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 GYO_2851 fcce9c55f8e36969fe9eab05517c2ae7 324 PRINTS PR00139 Asparaginase/glutaminase family signature 83 101 2.8E-19 T 14-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 GYO_2851 fcce9c55f8e36969fe9eab05517c2ae7 324 PRINTS PR00139 Asparaginase/glutaminase family signature 256 274 2.8E-19 T 14-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 GYO_2851 fcce9c55f8e36969fe9eab05517c2ae7 324 SUPERFAMILY SSF53774 2 319 2.36E-86 T 14-10-2018 IPR036152 Asparaginase/glutaminase-like superfamily Reactome: R-HSA-70614 GYO_2851 fcce9c55f8e36969fe9eab05517c2ae7 324 Gene3D G3DSA:3.40.50.40 211 323 4.2E-24 T 14-10-2018 IPR027473 L-asparaginase, C-terminal Reactome: R-HSA-70614 GYO_2851 fcce9c55f8e36969fe9eab05517c2ae7 324 PIRSF PIRSF001220 1 323 1.0E-84 T 14-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 GYO_2851 fcce9c55f8e36969fe9eab05517c2ae7 324 SMART SM00870 5 321 3.9E-102 T 14-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 GYO_2851 fcce9c55f8e36969fe9eab05517c2ae7 324 Pfam PF00710 Asparaginase, N-terminal 5 195 2.2E-51 T 14-10-2018 IPR027474 L-asparaginase, N-terminal Reactome: R-HSA-70614 GYO_2851 fcce9c55f8e36969fe9eab05517c2ae7 324 Gene3D G3DSA:3.40.50.1170 2 210 1.4E-61 T 14-10-2018 IPR037152 L-asparaginase, N-terminal domain superfamily Reactome: R-HSA-70614 GYO_2851 fcce9c55f8e36969fe9eab05517c2ae7 324 PIRSF PIRSF500176 2 323 1.0E-82 T 14-10-2018 GYO_2851 fcce9c55f8e36969fe9eab05517c2ae7 324 ProSitePatterns PS00917 Asparaginase / glutaminase active site signature 2. 84 94 - T 14-10-2018 IPR027475 Asparaginase/glutaminase, active site 2 Reactome: R-HSA-70614 GYO_3090 3a46775a2cde9fee3a0daab1e9013a4d 586 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 6 25 2.4E-9 T 14-10-2018 GYO_3090 3a46775a2cde9fee3a0daab1e9013a4d 586 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 356 378 2.4E-9 T 14-10-2018 GYO_3090 3a46775a2cde9fee3a0daab1e9013a4d 586 Gene3D G3DSA:3.90.700.10 258 367 1.8E-124 T 14-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 GYO_3090 3a46775a2cde9fee3a0daab1e9013a4d 586 SUPERFAMILY SSF56425 231 353 6.73E-31 T 14-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 GYO_3090 3a46775a2cde9fee3a0daab1e9013a4d 586 Gene3D G3DSA:3.50.50.60 6 403 1.8E-124 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily GYO_3090 3a46775a2cde9fee3a0daab1e9013a4d 586 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 396 411 9.7E-7 T 14-10-2018 GYO_3090 3a46775a2cde9fee3a0daab1e9013a4d 586 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 5 27 9.7E-7 T 14-10-2018 GYO_3090 3a46775a2cde9fee3a0daab1e9013a4d 586 Pfam PF00890 FAD binding domain 6 392 1.2E-87 T 14-10-2018 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 GYO_3090 3a46775a2cde9fee3a0daab1e9013a4d 586 TIGRFAM TIGR01811 sdhA_Bsu: succinate dehydrogenase or fumarate reductase, flavoprotein subunit 6 579 3.5E-283 T 14-10-2018 IPR011280 Succinate dehydrogenase/fumarate reductase flavoprotein subunit, low-GC Gram-positive bacteria KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279 GYO_3090 3a46775a2cde9fee3a0daab1e9013a4d 586 SUPERFAMILY SSF51905 6 424 1.15E-64 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily GYO_3090 3a46775a2cde9fee3a0daab1e9013a4d 586 PIRSF PIRSF000171 343 575 1.1E-16 T 14-10-2018 GYO_3090 3a46775a2cde9fee3a0daab1e9013a4d 586 PIRSF PIRSF000171 1 240 2.6E-20 T 14-10-2018 GYO_3090 3a46775a2cde9fee3a0daab1e9013a4d 586 Gene3D G3DSA:1.20.58.100 423 539 1.6E-34 T 14-10-2018 GYO_3090 3a46775a2cde9fee3a0daab1e9013a4d 586 SUPERFAMILY SSF46977 443 579 7.19E-44 T 14-10-2018 IPR037099 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain superfamily GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 GYO_3090 3a46775a2cde9fee3a0daab1e9013a4d 586 ProSitePatterns PS00504 Fumarate reductase / succinate dehydrogenase FAD-binding site. 39 48 - T 14-10-2018 IPR003952 Fumarate reductase/succinate dehydrogenase, FAD-binding site GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 GYO_3090 3a46775a2cde9fee3a0daab1e9013a4d 586 Pfam PF02910 Fumarate reductase flavoprotein C-term 452 579 1.3E-40 T 14-10-2018 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 GYO_1641 5166fc461768d4926daba0467d20e7ba 319 PRINTS PR00723 Subtilisin serine protease family (S8) signature 243 259 4.6E-23 T 14-10-2018 IPR015500 Peptidase S8, subtilisin-related GYO_1641 5166fc461768d4926daba0467d20e7ba 319 PRINTS PR00723 Subtilisin serine protease family (S8) signature 83 96 4.6E-23 T 14-10-2018 IPR015500 Peptidase S8, subtilisin-related GYO_1641 5166fc461768d4926daba0467d20e7ba 319 PRINTS PR00723 Subtilisin serine protease family (S8) signature 41 60 4.6E-23 T 14-10-2018 IPR015500 Peptidase S8, subtilisin-related GYO_1641 5166fc461768d4926daba0467d20e7ba 319 Gene3D G3DSA:3.40.50.200 3 307 3.1E-113 T 14-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 GYO_1641 5166fc461768d4926daba0467d20e7ba 319 Pfam PF00082 Subtilase family 41 284 1.6E-62 T 14-10-2018 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 GYO_1641 5166fc461768d4926daba0467d20e7ba 319 ProSitePatterns PS00136 Serine proteases, subtilase family, aspartic acid active site. 46 57 - T 14-10-2018 IPR023827 Peptidase S8, subtilisin, Asp-active site GYO_1641 5166fc461768d4926daba0467d20e7ba 319 ProSitePatterns PS00137 Serine proteases, subtilase family, histidine active site. 87 97 - T 14-10-2018 IPR022398 Peptidase S8, subtilisin, His-active site GYO_1641 5166fc461768d4926daba0467d20e7ba 319 SUPERFAMILY SSF52743 22 290 3.01E-88 T 14-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 GYO_1641 5166fc461768d4926daba0467d20e7ba 319 ProSitePatterns PS00138 Serine proteases, subtilase family, serine active site. 244 254 - T 14-10-2018 IPR023828 Peptidase S8, subtilisin, Ser-active site GYO_3015 99d7456007bd9f177b4688dd3a7b5960 201 SUPERFAMILY SSF50249 2 60 3.83E-13 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold GYO_3015 99d7456007bd9f177b4688dd3a7b5960 201 Gene3D G3DSA:1.10.150.20 64 138 1.7E-24 T 14-10-2018 GYO_3015 99d7456007bd9f177b4688dd3a7b5960 201 SMART SM00278 105 124 0.54 T 14-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 GYO_3015 99d7456007bd9f177b4688dd3a7b5960 201 SMART SM00278 70 89 2.3 T 14-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 GYO_3015 99d7456007bd9f177b4688dd3a7b5960 201 Pfam PF07499 RuvA, C-terminal domain 155 199 3.2E-13 T 14-10-2018 IPR011114 Holliday junction DNA helicase RuvA, C-terminal GO:0005524|GO:0006281|GO:0006310|GO:0009378|GO:0009379 GYO_3015 99d7456007bd9f177b4688dd3a7b5960 201 Gene3D G3DSA:1.10.8.10 150 199 2.1E-8 T 14-10-2018 GYO_3015 99d7456007bd9f177b4688dd3a7b5960 201 SUPERFAMILY SSF46929 154 199 9.29E-9 T 14-10-2018 IPR036267 RuvA, C-terminal domain superfamily GYO_3015 99d7456007bd9f177b4688dd3a7b5960 201 Pfam PF14520 Helix-hairpin-helix domain 69 126 8.4E-14 T 14-10-2018 GYO_3015 99d7456007bd9f177b4688dd3a7b5960 201 Hamap MF_00031 Holliday junction ATP-dependent DNA helicase RuvA [ruvA]. 1 200 29.16 T 14-10-2018 IPR000085 Bacterial DNA recombination protein RuvA GO:0003678|GO:0006281|GO:0006310 GYO_3015 99d7456007bd9f177b4688dd3a7b5960 201 Pfam PF01330 RuvA N terminal domain 2 59 3.8E-19 T 14-10-2018 IPR013849 DNA helicase, Holliday junction RuvA type, domain I, bacterial GO:0005524|GO:0006281|GO:0006310|GO:0009378 GYO_3015 99d7456007bd9f177b4688dd3a7b5960 201 TIGRFAM TIGR00084 ruvA: Holliday junction DNA helicase RuvA 1 200 4.5E-68 T 14-10-2018 IPR000085 Bacterial DNA recombination protein RuvA GO:0003678|GO:0006281|GO:0006310 GYO_3015 99d7456007bd9f177b4688dd3a7b5960 201 SUPERFAMILY SSF47781 62 135 6.23E-21 T 14-10-2018 IPR010994 RuvA domain 2-like GYO_3015 99d7456007bd9f177b4688dd3a7b5960 201 Gene3D G3DSA:2.40.50.140 1 62 1.2E-16 T 14-10-2018 GYO_3483 8f2a20230107689529b7d61bfd883fe0 378 PIRSF PIRSF000183 1 370 2.4E-199 T 14-10-2018 IPR008141 Alanine dehydrogenase GO:0000286|GO:0042853 KEGG: 00250+1.4.1.1|KEGG: 00430+1.4.1.1 GYO_3483 8f2a20230107689529b7d61bfd883fe0 378 SUPERFAMILY SSF52283 1 359 1.45E-67 T 14-10-2018 GYO_3483 8f2a20230107689529b7d61bfd883fe0 378 SMART SM01003 4 135 5.5E-78 T 14-10-2018 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal GYO_3483 8f2a20230107689529b7d61bfd883fe0 378 Pfam PF05222 Alanine dehydrogenase/PNT, N-terminal domain 4 135 1.2E-47 T 14-10-2018 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal GYO_3483 8f2a20230107689529b7d61bfd883fe0 378 Pfam PF01262 Alanine dehydrogenase/PNT, C-terminal domain 139 351 2.6E-84 T 14-10-2018 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain GYO_3483 8f2a20230107689529b7d61bfd883fe0 378 ProSitePatterns PS00836 Alanine dehydrogenase & pyridine nucleotide transhydrogenase signature 1. 4 30 - T 14-10-2018 IPR008142 Alanine dehydrogenase/NAD(P) transhydrogenase, conserved site-1 GO:0016491|GO:0055114 Reactome: R-HSA-71403 GYO_3483 8f2a20230107689529b7d61bfd883fe0 378 ProSitePatterns PS00837 Alanine dehydrogenase & pyridine nucleotide transhydrogenase signature 2. 171 196 - T 14-10-2018 IPR008143 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, conserved site-2 GO:0016491|GO:0055114 KEGG: 00250+1.4.1.1|KEGG: 00430+1.4.1.1|Reactome: R-HSA-71403 GYO_3483 8f2a20230107689529b7d61bfd883fe0 378 SMART SM01002 147 296 1.2E-89 T 14-10-2018 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain GYO_3483 8f2a20230107689529b7d61bfd883fe0 378 TIGRFAM TIGR00518 alaDH: alanine dehydrogenase 1 369 1.4E-207 T 14-10-2018 IPR008141 Alanine dehydrogenase GO:0000286|GO:0042853 KEGG: 00250+1.4.1.1|KEGG: 00430+1.4.1.1 GYO_3483 8f2a20230107689529b7d61bfd883fe0 378 Gene3D G3DSA:3.40.50.720 3 352 2.7E-141 T 14-10-2018 GYO_3483 8f2a20230107689529b7d61bfd883fe0 378 SUPERFAMILY SSF51735 135 302 2.72E-49 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily GYO_3483 8f2a20230107689529b7d61bfd883fe0 378 Gene3D G3DSA:3.40.50.720 128 304 2.7E-141 T 14-10-2018 GYO_0755 b92d4f1b40cff6120155394c675b4343 190 SUPERFAMILY SSF53474 4 184 2.21E-38 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold GYO_0755 b92d4f1b40cff6120155394c675b4343 190 Pfam PF06821 Serine hydrolase 5 182 5.8E-42 T 14-10-2018 IPR010662 Putative hydrolase RBBP9/YdeN GO:0016787 GYO_0755 b92d4f1b40cff6120155394c675b4343 190 Gene3D G3DSA:3.40.50.1820 1 190 1.6E-51 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold GYO_3544 ec4b178a81f33496855ae04cc5659ce5 237 Pfam PF02683 Cytochrome C biogenesis protein transmembrane region 9 217 3.3E-54 T 14-10-2018 IPR003834 Cytochrome C biogenesis protein, transmembrane domain GO:0016020|GO:0017004|GO:0055114 GYO_2564 3b02ed21871fd646e33bd0eeccc10654 184 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 32 48 5.4E-25 T 14-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 GYO_2564 3b02ed21871fd646e33bd0eeccc10654 184 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 81 93 5.4E-25 T 14-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 GYO_2564 3b02ed21871fd646e33bd0eeccc10654 184 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 136 155 5.4E-25 T 14-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 GYO_2564 3b02ed21871fd646e33bd0eeccc10654 184 TIGRFAM TIGR02227 sigpep_I_bact: signal peptidase I 15 178 4.2E-53 T 14-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 GYO_2564 3b02ed21871fd646e33bd0eeccc10654 184 ProSitePatterns PS00761 Signal peptidases I signature 3. 141 154 - T 14-10-2018 IPR019758 Peptidase S26A, signal peptidase I, conserved site GO:0008236|GO:0016021 GYO_2564 3b02ed21871fd646e33bd0eeccc10654 184 ProSitePatterns PS00501 Signal peptidases I serine active site. 41 48 - T 14-10-2018 IPR019756 Peptidase S26A, signal peptidase I, serine active site GO:0008236|GO:0016021 Reactome: R-HSA-1799339|Reactome: R-HSA-381771|Reactome: R-HSA-400511|Reactome: R-HSA-422085 GYO_2564 3b02ed21871fd646e33bd0eeccc10654 184 Pfam PF00717 Peptidase S24-like 39 105 1.9E-18 T 14-10-2018 IPR015927 Peptidase S24/S26A/S26B/S26C GYO_2564 3b02ed21871fd646e33bd0eeccc10654 184 SUPERFAMILY SSF51306 30 181 5.58E-50 T 14-10-2018 IPR036286 LexA/Signal peptidase-like superfamily GYO_2564 3b02ed21871fd646e33bd0eeccc10654 184 ProSitePatterns PS00760 Signal peptidases I lysine active site. 83 95 - T 14-10-2018 IPR019757 Peptidase S26A, signal peptidase I, lysine active site GO:0008236|GO:0016021 GYO_2564 3b02ed21871fd646e33bd0eeccc10654 184 Gene3D G3DSA:2.10.109.10 62 184 4.7E-38 T 14-10-2018 GYO_1773 bb2692c936ce7de3d4c31a1f866a2c62 397 Pfam PF12704 MacB-like periplasmic core domain 21 240 2.3E-30 T 14-10-2018 IPR025857 MacB-like periplasmic core domain GYO_1773 bb2692c936ce7de3d4c31a1f866a2c62 397 SMART SM01066 57 132 0.0072 T 14-10-2018 IPR005085 Carbohydrate binding module family 25 GO:2001070 GYO_1773 bb2692c936ce7de3d4c31a1f866a2c62 397 Pfam PF02687 FtsX-like permease family 303 390 2.6E-12 T 14-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 GYO_2222 bb9c717603054aaf3f96dfcb2f53ad53 405 Pfam PF00067 Cytochrome P450 60 370 3.0E-35 T 14-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 GYO_2222 bb9c717603054aaf3f96dfcb2f53ad53 405 PRINTS PR00359 B-class P450 signature 351 362 1.8E-57 T 14-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 GYO_2222 bb9c717603054aaf3f96dfcb2f53ad53 405 PRINTS PR00359 B-class P450 signature 276 287 1.8E-57 T 14-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 GYO_2222 bb9c717603054aaf3f96dfcb2f53ad53 405 PRINTS PR00359 B-class P450 signature 293 320 1.8E-57 T 14-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 GYO_2222 bb9c717603054aaf3f96dfcb2f53ad53 405 PRINTS PR00359 B-class P450 signature 342 351 1.8E-57 T 14-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 GYO_2222 bb9c717603054aaf3f96dfcb2f53ad53 405 PRINTS PR00359 B-class P450 signature 321 336 1.8E-57 T 14-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 GYO_2222 bb9c717603054aaf3f96dfcb2f53ad53 405 PRINTS PR00359 B-class P450 signature 86 97 1.8E-57 T 14-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 GYO_2222 bb9c717603054aaf3f96dfcb2f53ad53 405 PRINTS PR00359 B-class P450 signature 149 164 1.8E-57 T 14-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 GYO_2222 bb9c717603054aaf3f96dfcb2f53ad53 405 PRINTS PR00359 B-class P450 signature 132 148 1.8E-57 T 14-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 GYO_2222 bb9c717603054aaf3f96dfcb2f53ad53 405 PRINTS PR00359 B-class P450 signature 195 217 1.8E-57 T 14-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 GYO_2222 bb9c717603054aaf3f96dfcb2f53ad53 405 Gene3D G3DSA:1.10.630.10 2 405 2.8E-126 T 14-10-2018 IPR036396 Cytochrome P450 superfamily GO:0005506|GO:0016705|GO:0020037|GO:0055114 GYO_2222 bb9c717603054aaf3f96dfcb2f53ad53 405 ProSitePatterns PS00086 Cytochrome P450 cysteine heme-iron ligand signature. 344 353 - T 14-10-2018 IPR017972 Cytochrome P450, conserved site GO:0016705|GO:0055114 GYO_2222 bb9c717603054aaf3f96dfcb2f53ad53 405 PRINTS PR00385 P450 superfamily signature 351 362 9.7E-8 T 14-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 GYO_2222 bb9c717603054aaf3f96dfcb2f53ad53 405 PRINTS PR00385 P450 superfamily signature 342 351 9.7E-8 T 14-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 GYO_2222 bb9c717603054aaf3f96dfcb2f53ad53 405 PRINTS PR00385 P450 superfamily signature 241 258 9.7E-8 T 14-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 GYO_2222 bb9c717603054aaf3f96dfcb2f53ad53 405 PRINTS PR00385 P450 superfamily signature 276 287 9.7E-8 T 14-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 GYO_2222 bb9c717603054aaf3f96dfcb2f53ad53 405 SUPERFAMILY SSF48264 31 403 8.91E-94 T 14-10-2018 IPR036396 Cytochrome P450 superfamily GO:0005506|GO:0016705|GO:0020037|GO:0055114 GYO_4066 899834e9d1c9e5409b58657a2b39a013 180 Gene3D G3DSA:3.40.50.10360 1 180 3.1E-80 T 14-10-2018 IPR028345 Aminoglycoside 3-N-acetyltransferase-like GYO_4066 899834e9d1c9e5409b58657a2b39a013 180 PIRSF PIRSF007510 1 180 9.5E-83 T 14-10-2018 IPR006340 Protein of unknown function DUF436 GYO_4066 899834e9d1c9e5409b58657a2b39a013 180 Hamap MF_00800 UPF0340 protein . 1 180 93.471 T 14-10-2018 IPR006340 Protein of unknown function DUF436 GYO_4066 899834e9d1c9e5409b58657a2b39a013 180 ProDom PD102102 UPF0340 3D-STRUCTURE YWLG SMU.87 STU1894 BT9727_4999 TRANSFERASE TTE0860 SPY1898/M5005_SPY1614 TT1679 14 180 5.0E-90 T 14-10-2018 IPR006340 Protein of unknown function DUF436 GYO_4066 899834e9d1c9e5409b58657a2b39a013 180 Pfam PF04260 Protein of unknown function (DUF436) 9 177 3.8E-77 T 14-10-2018 IPR006340 Protein of unknown function DUF436 GYO_4066 899834e9d1c9e5409b58657a2b39a013 180 SUPERFAMILY SSF110710 1 179 8.63E-79 T 14-10-2018 IPR028345 Aminoglycoside 3-N-acetyltransferase-like GYO_4066 899834e9d1c9e5409b58657a2b39a013 180 TIGRFAM TIGR01440 TIGR01440: TIGR01440 family protein 9 177 1.9E-70 T 14-10-2018 IPR006340 Protein of unknown function DUF436 GYO_2919 fa5b57f5c2ef3e86335537e2fda7fa8c 176 Pfam PF08281 Sigma-70, region 4 99 150 4.8E-15 T 14-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 GYO_2919 fa5b57f5c2ef3e86335537e2fda7fa8c 176 ProSitePatterns PS01063 Sigma-70 factors ECF subfamily signature. 28 59 - T 14-10-2018 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 GYO_2919 fa5b57f5c2ef3e86335537e2fda7fa8c 176 TIGRFAM TIGR02959 SigZ: RNA polymerase sigma factor, SigZ family 7 174 2.2E-77 T 14-10-2018 IPR014304 RNA polymerase sigma-Z type GYO_2919 fa5b57f5c2ef3e86335537e2fda7fa8c 176 SUPERFAMILY SSF88659 87 155 9.91E-14 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like GYO_2919 fa5b57f5c2ef3e86335537e2fda7fa8c 176 Gene3D G3DSA:1.10.10.10 102 156 5.9E-15 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily GYO_2919 fa5b57f5c2ef3e86335537e2fda7fa8c 176 Pfam PF04542 Sigma-70 region 2 6 72 1.0E-9 T 14-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 GYO_2919 fa5b57f5c2ef3e86335537e2fda7fa8c 176 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 3 154 1.0E-24 T 14-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 GYO_2919 fa5b57f5c2ef3e86335537e2fda7fa8c 176 SUPERFAMILY SSF88946 4 89 7.85E-15 T 14-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 GYO_2919 fa5b57f5c2ef3e86335537e2fda7fa8c 176 Gene3D G3DSA:1.10.1740.10 2 101 1.9E-13 T 14-10-2018 GYO_2791 d8d328e5744ec8d4fa40e3d97b7ba1c1 295 Pfam PF02091 Glycyl-tRNA synthetase alpha subunit 3 280 2.3E-147 T 14-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 GYO_2791 d8d328e5744ec8d4fa40e3d97b7ba1c1 295 Hamap MF_00254 Glycine--tRNA ligase alpha subunit [glyQ]. 1 281 58.104 T 14-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 GYO_2791 d8d328e5744ec8d4fa40e3d97b7ba1c1 295 TIGRFAM TIGR00388 glyQ: glycine--tRNA ligase, alpha subunit 1 288 4.2E-171 T 14-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 GYO_2791 d8d328e5744ec8d4fa40e3d97b7ba1c1 295 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 133 153 1.6E-67 T 14-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 GYO_2791 d8d328e5744ec8d4fa40e3d97b7ba1c1 295 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 241 257 1.6E-67 T 14-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 GYO_2791 d8d328e5744ec8d4fa40e3d97b7ba1c1 295 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 76 96 1.6E-67 T 14-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 GYO_2791 d8d328e5744ec8d4fa40e3d97b7ba1c1 295 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 107 131 1.6E-67 T 14-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 GYO_2791 d8d328e5744ec8d4fa40e3d97b7ba1c1 295 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 156 171 1.6E-67 T 14-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 GYO_2791 d8d328e5744ec8d4fa40e3d97b7ba1c1 295 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 55 70 1.6E-67 T 14-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 GYO_2791 d8d328e5744ec8d4fa40e3d97b7ba1c1 295 Gene3D G3DSA:3.30.930.10 1 204 1.4E-106 T 14-10-2018 GYO_2791 d8d328e5744ec8d4fa40e3d97b7ba1c1 295 Gene3D G3DSA:1.20.58.180 205 285 1.2E-36 T 14-10-2018 GYO_2791 d8d328e5744ec8d4fa40e3d97b7ba1c1 295 SUPERFAMILY SSF55681 1 280 9.69E-132 T 14-10-2018 GYO_2480 92d907dcbdfa368f74be32f171990fc2 197 Pfam PF07187 Protein of unknown function (DUF1405) 24 181 2.5E-58 T 14-10-2018 IPR009845 Protein of unknown function DUF1405 GYO_2450 ca966d5f4966ee445a85b12e661d2df0 139 Gene3D G3DSA:2.60.40.790 10 139 1.3E-10 T 14-10-2018 IPR008978 HSP20-like chaperone GYO_2450 ca966d5f4966ee445a85b12e661d2df0 139 SUPERFAMILY SSF49764 48 137 5.23E-7 T 14-10-2018 IPR008978 HSP20-like chaperone GYO_1139 a80351bff387a5a6653c040445876171 392 Gene3D G3DSA:3.90.1150.10 1 385 2.5E-159 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 GYO_1139 a80351bff387a5a6653c040445876171 392 PIRSF PIRSF000521 146 345 5.3E-13 T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 GYO_1139 a80351bff387a5a6653c040445876171 392 PIRSF PIRSF000521 1 122 1.7E-5 T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 GYO_1139 a80351bff387a5a6653c040445876171 392 TIGRFAM TIGR00713 hemL: glutamate-1-semialdehyde-2,1-aminomutase 1 389 2.8E-159 T 14-10-2018 IPR004639 Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase GO:0033014|GO:0042286 KEGG: 00860+5.4.3.8|MetaCyc: PWY-5188 GYO_1139 a80351bff387a5a6653c040445876171 392 SUPERFAMILY SSF53383 2 388 1.2E-115 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase GYO_1139 a80351bff387a5a6653c040445876171 392 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 199 235 - T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 GYO_1139 a80351bff387a5a6653c040445876171 392 Pfam PF00202 Aminotransferase class-III 2 371 2.8E-70 T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 GYO_1139 a80351bff387a5a6653c040445876171 392 Gene3D G3DSA:3.40.640.10 34 282 2.5E-159 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 GYO_1139 a80351bff387a5a6653c040445876171 392 Hamap MF_00375 Glutamate-1-semialdehyde 2,1-aminomutase [hemL]. 1 390 85.524 T 14-10-2018 IPR004639 Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase GO:0033014|GO:0042286 KEGG: 00860+5.4.3.8|MetaCyc: PWY-5188 GYO_1044 8da9e905cc7c2bb01c2dabc4f6ee0059 150 Pfam PF03323 Bacillus/Clostridium GerA spore germination protein 44 150 2.9E-14 T 14-10-2018 IPR004995 Bacillus/Clostridium Ger spore germination protein GO:0009847|GO:0016021 GYO_3985 6c32cc46a4dcd971647530caabd2365f 254 Gene3D G3DSA:3.20.20.140 1 254 3.0E-106 T 14-10-2018 GYO_3985 6c32cc46a4dcd971647530caabd2365f 254 PIRSF PIRSF016557 1 254 6.8E-107 T 14-10-2018 IPR016667 Capsular polysaccharide synthesis, CpsB/CapC GO:0004725|GO:0030145 GYO_3985 6c32cc46a4dcd971647530caabd2365f 254 SUPERFAMILY SSF89550 1 206 7.26E-16 T 14-10-2018 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 GYO_1495 bce11ad2de0351d8c9d16de1edb4c34e 390 PIRSF PIRSF001434 2 385 8.0E-147 T 14-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 GYO_1495 bce11ad2de0351d8c9d16de1edb4c34e 390 SUPERFAMILY SSF53383 19 383 5.3E-114 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase GYO_1495 bce11ad2de0351d8c9d16de1edb4c34e 390 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 9 382 3.0E-152 T 14-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 GYO_1495 bce11ad2de0351d8c9d16de1edb4c34e 390 Gene3D G3DSA:3.40.640.10 7 249 3.6E-88 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 GYO_1495 bce11ad2de0351d8c9d16de1edb4c34e 390 Gene3D G3DSA:3.90.1150.10 250 384 1.6E-48 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 GYO_1495 bce11ad2de0351d8c9d16de1edb4c34e 390 ProSitePatterns PS00868 Cys/Met metabolism enzymes pyridoxal-phosphate attachment site. 192 206 - T 14-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 GYO_0004 490887334e64b8205c0ff9572bcfcde0 370 TIGRFAM TIGR00611 recf: DNA replication and repair protein RecF 1 366 1.7E-144 T 14-10-2018 IPR001238 DNA-binding, RecF GO:0003697|GO:0005524|GO:0006281 GYO_0004 490887334e64b8205c0ff9572bcfcde0 370 ProSitePatterns PS00617 RecF protein signature 1. 116 136 - T 14-10-2018 IPR018078 DNA-binding, RecF, conserved site GO:0003697|GO:0005524|GO:0006281 GYO_0004 490887334e64b8205c0ff9572bcfcde0 370 SUPERFAMILY SSF52540 2 349 3.09E-43 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase GYO_0004 490887334e64b8205c0ff9572bcfcde0 370 ProSitePatterns PS00618 RecF protein signature 2. 312 330 - T 14-10-2018 IPR018078 DNA-binding, RecF, conserved site GO:0003697|GO:0005524|GO:0006281 GYO_0004 490887334e64b8205c0ff9572bcfcde0 370 Gene3D G3DSA:1.20.1050.90 119 311 2.1E-111 T 14-10-2018 GYO_0004 490887334e64b8205c0ff9572bcfcde0 370 Pfam PF02463 RecF/RecN/SMC N terminal domain 2 350 2.4E-19 T 14-10-2018 IPR003395 RecF/RecN/SMC, N-terminal GYO_0004 490887334e64b8205c0ff9572bcfcde0 370 Gene3D G3DSA:3.40.50.300 6 345 2.1E-111 T 14-10-2018 GYO_0004 490887334e64b8205c0ff9572bcfcde0 370 Hamap MF_00365 DNA replication and repair protein RecF [recF]. 1 370 105.505 T 14-10-2018 IPR001238 DNA-binding, RecF GO:0003697|GO:0005524|GO:0006281 GYO_0602 b9345b5fa8525e46a812b5e874275ba4 249 SUPERFAMILY SSF55469 1 247 9.82E-69 T 14-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 GYO_0602 b9345b5fa8525e46a812b5e874275ba4 249 Pfam PF00881 Nitroreductase family 11 165 4.6E-21 T 14-10-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 GYO_0602 b9345b5fa8525e46a812b5e874275ba4 249 PIRSF PIRSF005426 1 248 1.1E-91 T 14-10-2018 IPR016446 Flavin oxidoreductase Frp family GO:0016491|GO:0055114 GYO_0602 b9345b5fa8525e46a812b5e874275ba4 249 Gene3D G3DSA:3.40.109.10 1 249 3.4E-82 T 14-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 GYO_0583 b671807a22ca116931b260ebd4e0ad42 492 Pfam PF00854 POT family 96 460 4.7E-93 T 14-10-2018 IPR000109 Proton-dependent oligopeptide transporter family GO:0016020|GO:0022857|GO:0055085 Reactome: R-HSA-427975 GYO_0583 b671807a22ca116931b260ebd4e0ad42 492 Gene3D G3DSA:1.20.1250.20 1 492 7.2E-146 T 14-10-2018 GYO_0583 b671807a22ca116931b260ebd4e0ad42 492 ProSitePatterns PS01023 PTR2 family proton/oligopeptide symporters signature 2. 158 170 - T 14-10-2018 IPR018456 PTR2 family proton/oligopeptide symporter, conserved site GO:0005215|GO:0006857|GO:0016020 Reactome: R-HSA-427975 GYO_0583 b671807a22ca116931b260ebd4e0ad42 492 TIGRFAM TIGR00924 yjdL_sub1_fam: amino acid/peptide transporter (Peptide:H+ symporter) 16 488 2.3E-140 T 14-10-2018 IPR005279 Dipeptide/tripeptide permease GO:0015833|GO:0016020|GO:1904680 GYO_0583 b671807a22ca116931b260ebd4e0ad42 492 ProSitePatterns PS01022 PTR2 family proton/oligopeptide symporters signature 1. 84 108 - T 14-10-2018 IPR018456 PTR2 family proton/oligopeptide symporter, conserved site GO:0005215|GO:0006857|GO:0016020 Reactome: R-HSA-427975 GYO_0583 b671807a22ca116931b260ebd4e0ad42 492 SUPERFAMILY SSF103473 16 483 3.4E-34 T 14-10-2018 IPR036259 MFS transporter superfamily GYO_3320 7bb7130eb4361b42c76e5446b9cd5f72 157 PIRSF PIRSF006160 1 156 3.1E-60 T 14-10-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 GYO_3320 7bb7130eb4361b42c76e5446b9cd5f72 157 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 49 67 2.4E-40 T 14-10-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 GYO_3320 7bb7130eb4361b42c76e5446b9cd5f72 157 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 5 23 2.4E-40 T 14-10-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 GYO_3320 7bb7130eb4361b42c76e5446b9cd5f72 157 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 28 46 2.4E-40 T 14-10-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 GYO_3320 7bb7130eb4361b42c76e5446b9cd5f72 157 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 78 96 2.4E-40 T 14-10-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 GYO_3320 7bb7130eb4361b42c76e5446b9cd5f72 157 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 119 138 2.4E-40 T 14-10-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 GYO_3320 7bb7130eb4361b42c76e5446b9cd5f72 157 Pfam PF02664 S-Ribosylhomocysteinase (LuxS) 4 150 2.8E-51 T 14-10-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 GYO_3320 7bb7130eb4361b42c76e5446b9cd5f72 157 Gene3D G3DSA:3.30.1360.80 1 157 2.4E-63 T 14-10-2018 IPR037005 S-ribosylhomocysteinase (LuxS) superfamily GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 GYO_3320 7bb7130eb4361b42c76e5446b9cd5f72 157 Hamap MF_00091 S-ribosylhomocysteine lyase [luxS]. 1 157 32.377 T 14-10-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 GYO_3320 7bb7130eb4361b42c76e5446b9cd5f72 157 ProDom PD013172 LYASE SYNTHESIS LUXS AUTOINDUCER-2 PRODUCTION AUTOINDUCER S-RIBOSYLHOMOCYSTEINE AI-2 QUORUM SENSING 8 148 3.0E-80 T 14-10-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 GYO_3320 7bb7130eb4361b42c76e5446b9cd5f72 157 SUPERFAMILY SSF63411 4 150 1.01E-58 T 14-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 GYO_0143 7b89d9edec0af52c57cfdf3ee41321cf 209 Pfam PF00297 Ribosomal protein L3 99 181 9.3E-17 T 14-10-2018 IPR000597 Ribosomal protein L3 GO:0003735|GO:0005622|GO:0005840|GO:0006412 GYO_0143 7b89d9edec0af52c57cfdf3ee41321cf 209 TIGRFAM TIGR03625 L3_bact: 50S ribosomal protein uL3 4 203 7.8E-87 T 14-10-2018 IPR019927 Ribosomal protein L3, bacterial/organelle-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 GYO_0143 7b89d9edec0af52c57cfdf3ee41321cf 209 SUPERFAMILY SSF50447 1 207 1.68E-81 T 14-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily GYO_0143 7b89d9edec0af52c57cfdf3ee41321cf 209 Hamap MF_01325_B 50S ribosomal protein L3 [rplC]. 2 206 39.392 T 14-10-2018 IPR019927 Ribosomal protein L3, bacterial/organelle-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 GYO_0143 7b89d9edec0af52c57cfdf3ee41321cf 209 ProSitePatterns PS00474 Ribosomal protein L3 signature. 102 125 - T 14-10-2018 IPR019926 Ribosomal protein L3, conserved site GYO_0143 7b89d9edec0af52c57cfdf3ee41321cf 209 Gene3D G3DSA:2.40.50.620 33 96 6.7E-14 T 14-10-2018 GYO_0143 7b89d9edec0af52c57cfdf3ee41321cf 209 Gene3D G3DSA:2.40.30.10 131 209 7.5E-18 T 14-10-2018 GYO_1007 bd3cedb39483de4106b4c830f9050c8a 518 Pfam PF00005 ABC transporter 20 191 5.8E-27 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 GYO_1007 bd3cedb39483de4106b4c830f9050c8a 518 ProSitePatterns PS00211 ABC transporters family signature. 163 177 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 GYO_1007 bd3cedb39483de4106b4c830f9050c8a 518 Gene3D G3DSA:3.40.50.300 289 515 7.7E-44 T 14-10-2018 GYO_1007 bd3cedb39483de4106b4c830f9050c8a 518 Pfam PF00005 ABC transporter 342 469 2.6E-21 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 GYO_1007 bd3cedb39483de4106b4c830f9050c8a 518 SUPERFAMILY SSF52540 307 507 1.83E-36 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase GYO_1007 bd3cedb39483de4106b4c830f9050c8a 518 SMART SM00382 349 518 4.5E-8 T 14-10-2018 IPR003593 AAA+ ATPase domain GYO_1007 bd3cedb39483de4106b4c830f9050c8a 518 SMART SM00382 28 252 2.7E-9 T 14-10-2018 IPR003593 AAA+ ATPase domain GYO_1007 bd3cedb39483de4106b4c830f9050c8a 518 Pfam PF12848 ABC transporter 230 315 6.6E-21 T 14-10-2018 IPR032781 ABC-transporter extension domain GYO_1007 bd3cedb39483de4106b4c830f9050c8a 518 SUPERFAMILY SSF52540 4 244 3.36E-49 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase GYO_1007 bd3cedb39483de4106b4c830f9050c8a 518 ProSitePatterns PS00211 ABC transporters family signature. 441 455 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 GYO_1007 bd3cedb39483de4106b4c830f9050c8a 518 Gene3D G3DSA:3.40.50.300 3 285 4.9E-66 T 14-10-2018 GYO_1406 268caa95b671db9541546ce9ab663d74 149 Pfam PF13673 Acetyltransferase (GNAT) domain 25 135 7.2E-11 T 14-10-2018 IPR000182 GNAT domain GYO_1406 268caa95b671db9541546ce9ab663d74 149 Gene3D G3DSA:3.40.630.30 1 145 8.9E-38 T 14-10-2018 GYO_1406 268caa95b671db9541546ce9ab663d74 149 SUPERFAMILY SSF55729 10 144 1.87E-18 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase GYO_3538 260003858dd3fbc0c8a220a86b8b7de3 494 TIGRFAM TIGR03164 UHCUDC: OHCU decarboxylase 10 162 3.2E-63 T 14-10-2018 IPR017580 2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase, type 1 GO:0019428 KEGG: 00230+4.1.1.97|MetaCyc: PWY-5691|MetaCyc: PWY-7394|MetaCyc: PWY-7849 GYO_3538 260003858dd3fbc0c8a220a86b8b7de3 494 TIGRFAM TIGR03383 urate_oxi: urate oxidase 172 475 4.2E-85 T 14-10-2018 IPR002042 Uricase KEGG: 00230+1.7.3.3|KEGG: 00232+1.7.3.3|MetaCyc: PWY-5691 GYO_3538 260003858dd3fbc0c8a220a86b8b7de3 494 Gene3D G3DSA:3.10.270.10 172 491 1.4E-110 T 14-10-2018 GYO_3538 260003858dd3fbc0c8a220a86b8b7de3 494 Gene3D G3DSA:1.10.3330.10 2 171 2.5E-55 T 14-10-2018 IPR036778 Oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase superfamily KEGG: 00230+4.1.1.97|MetaCyc: PWY-5691|MetaCyc: PWY-7394|MetaCyc: PWY-7849 GYO_3538 260003858dd3fbc0c8a220a86b8b7de3 494 PRINTS PR00093 Uricase signature 232 246 9.6E-12 T 14-10-2018 IPR002042 Uricase KEGG: 00230+1.7.3.3|KEGG: 00232+1.7.3.3|MetaCyc: PWY-5691 GYO_3538 260003858dd3fbc0c8a220a86b8b7de3 494 PRINTS PR00093 Uricase signature 268 281 9.6E-12 T 14-10-2018 IPR002042 Uricase KEGG: 00230+1.7.3.3|KEGG: 00232+1.7.3.3|MetaCyc: PWY-5691 GYO_3538 260003858dd3fbc0c8a220a86b8b7de3 494 PRINTS PR00093 Uricase signature 339 355 9.6E-12 T 14-10-2018 IPR002042 Uricase KEGG: 00230+1.7.3.3|KEGG: 00232+1.7.3.3|MetaCyc: PWY-5691 GYO_3538 260003858dd3fbc0c8a220a86b8b7de3 494 PRINTS PR00093 Uricase signature 355 367 9.6E-12 T 14-10-2018 IPR002042 Uricase KEGG: 00230+1.7.3.3|KEGG: 00232+1.7.3.3|MetaCyc: PWY-5691 GYO_3538 260003858dd3fbc0c8a220a86b8b7de3 494 SUPERFAMILY SSF55620 326 477 2.34E-49 T 14-10-2018 GYO_3538 260003858dd3fbc0c8a220a86b8b7de3 494 Pfam PF01014 Uricase 176 295 5.0E-6 T 14-10-2018 IPR002042 Uricase KEGG: 00230+1.7.3.3|KEGG: 00232+1.7.3.3|MetaCyc: PWY-5691 GYO_3538 260003858dd3fbc0c8a220a86b8b7de3 494 Pfam PF01014 Uricase 335 468 3.3E-19 T 14-10-2018 IPR002042 Uricase KEGG: 00230+1.7.3.3|KEGG: 00232+1.7.3.3|MetaCyc: PWY-5691 GYO_3538 260003858dd3fbc0c8a220a86b8b7de3 494 ProSitePatterns PS00366 Uricase signature. 339 366 - T 14-10-2018 IPR019842 Uricase, conserved site GO:0004846|GO:0006144|GO:0055114 KEGG: 00230+1.7.3.3|KEGG: 00232+1.7.3.3|MetaCyc: PWY-5691 GYO_3538 260003858dd3fbc0c8a220a86b8b7de3 494 Pfam PF09349 OHCU decarboxylase 8 160 1.6E-42 T 14-10-2018 IPR018020 Oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase KEGG: 00230+4.1.1.97|MetaCyc: PWY-5691|MetaCyc: PWY-7394|MetaCyc: PWY-7849 GYO_3538 260003858dd3fbc0c8a220a86b8b7de3 494 SUPERFAMILY SSF55620 175 317 1.33E-34 T 14-10-2018 GYO_3538 260003858dd3fbc0c8a220a86b8b7de3 494 SUPERFAMILY SSF158694 3 162 6.8E-49 T 14-10-2018 IPR036778 Oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase superfamily KEGG: 00230+4.1.1.97|MetaCyc: PWY-5691|MetaCyc: PWY-7394|MetaCyc: PWY-7849 GYO_0086 0d0ef50faea23e3c3d48904e6bbd518c 308 Gene3D G3DSA:3.40.50.1100 46 144 3.1E-126 T 14-10-2018 GYO_0086 0d0ef50faea23e3c3d48904e6bbd518c 308 Gene3D G3DSA:3.40.50.1100 7 301 3.1E-126 T 14-10-2018 GYO_0086 0d0ef50faea23e3c3d48904e6bbd518c 308 TIGRFAM TIGR01139 cysK: cysteine synthase A 8 305 1.2E-148 T 14-10-2018 IPR005859 Cysteine synthase CysK GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936 GYO_0086 0d0ef50faea23e3c3d48904e6bbd518c 308 TIGRFAM TIGR01136 cysKM: cysteine synthase 8 305 6.2E-139 T 14-10-2018 IPR005856 Cysteine synthase GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936 GYO_0086 0d0ef50faea23e3c3d48904e6bbd518c 308 SUPERFAMILY SSF53686 3 305 1.96E-107 T 14-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme GYO_0086 0d0ef50faea23e3c3d48904e6bbd518c 308 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 9 293 4.2E-73 T 14-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme GYO_0086 0d0ef50faea23e3c3d48904e6bbd518c 308 ProSitePatterns PS00901 Cysteine synthase/cystathionine beta-synthase P-phosphate attachment site. 34 52 - T 14-10-2018 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site GO:0006535 GYO_3739 d09819db36adb75082d2bb7288a08152 354 Gene3D G3DSA:3.30.565.10 220 342 3.1E-28 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily GYO_3739 d09819db36adb75082d2bb7288a08152 354 Pfam PF07730 Histidine kinase 156 221 4.5E-18 T 14-10-2018 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 GYO_3739 d09819db36adb75082d2bb7288a08152 354 SUPERFAMILY SSF55874 228 342 4.98E-12 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily GYO_3739 d09819db36adb75082d2bb7288a08152 354 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 263 307 2.4E-5 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase GYO_3891 94bcf088b7284ab4068ea9baaae13c9e 461 Gene3D G3DSA:3.40.50.300 121 286 2.4E-20 T 14-10-2018 GYO_3891 94bcf088b7284ab4068ea9baaae13c9e 461 SMART SM00487 118 302 2.6E-17 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain GYO_3891 94bcf088b7284ab4068ea9baaae13c9e 461 Pfam PF00271 Helicase conserved C-terminal domain 327 424 7.8E-13 T 14-10-2018 IPR001650 Helicase, C-terminal GYO_3891 94bcf088b7284ab4068ea9baaae13c9e 461 Gene3D G3DSA:3.40.50.300 305 461 2.9E-23 T 14-10-2018 GYO_3891 94bcf088b7284ab4068ea9baaae13c9e 461 SMART SM00490 344 425 3.5E-11 T 14-10-2018 IPR001650 Helicase, C-terminal GYO_3891 94bcf088b7284ab4068ea9baaae13c9e 461 SUPERFAMILY SSF52540 135 437 3.15E-34 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase GYO_3891 94bcf088b7284ab4068ea9baaae13c9e 461 Pfam PF04851 Type III restriction enzyme, res subunit 121 269 2.8E-9 T 14-10-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 GYO_0388 d2585ca37d7086d7b1360f1899457187 223 SUPERFAMILY SSF46894 125 217 6.24E-15 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 GYO_0388 d2585ca37d7086d7b1360f1899457187 223 SMART SM00862 145 217 5.6E-14 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 GYO_0388 d2585ca37d7086d7b1360f1899457187 223 Gene3D G3DSA:3.40.50.2300 1 124 1.3E-30 T 14-10-2018 GYO_0388 d2585ca37d7086d7b1360f1899457187 223 Pfam PF00072 Response regulator receiver domain 6 111 4.3E-23 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 GYO_0388 d2585ca37d7086d7b1360f1899457187 223 Pfam PF00486 Transcriptional regulatory protein, C terminal 145 217 7.8E-15 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 GYO_0388 d2585ca37d7086d7b1360f1899457187 223 SUPERFAMILY SSF52172 1 122 6.26E-33 T 14-10-2018 IPR011006 CheY-like superfamily GYO_0388 d2585ca37d7086d7b1360f1899457187 223 SMART SM00448 4 112 5.4E-32 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 GYO_0388 d2585ca37d7086d7b1360f1899457187 223 Gene3D G3DSA:1.10.10.10 125 223 1.4E-17 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily GYO_3456 38a6175251ff45f82f45e029e5df9413 124 TIGRFAM TIGR01300 CPA3_mnhG_phaG: monovalent cation/proton antiporter, MnhG/PhaG subunit 11 108 1.4E-35 T 14-10-2018 IPR005133 Na+/H+ antiporter subunit G GO:0005451|GO:0015672|GO:1902600 GYO_3456 38a6175251ff45f82f45e029e5df9413 124 Pfam PF03334 Na+/H+ antiporter subunit 12 93 9.5E-27 T 14-10-2018 IPR005133 Na+/H+ antiporter subunit G GO:0005451|GO:0015672|GO:1902600 GYO_0376 dd8d0e1dff152646c739409b8c6d1e31 505 Pfam PF00361 Proton-conducting membrane transporter 122 402 2.3E-66 T 14-10-2018 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 GYO_0376 dd8d0e1dff152646c739409b8c6d1e31 505 Pfam PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus 69 108 1.1E-6 T 14-10-2018 IPR001516 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminal Reactome: R-HSA-611105|Reactome: R-HSA-6799198 GYO_0376 dd8d0e1dff152646c739409b8c6d1e31 505 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 213 234 9.2E-13 T 14-10-2018 GYO_0376 dd8d0e1dff152646c739409b8c6d1e31 505 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 71 96 9.2E-13 T 14-10-2018 GYO_0376 dd8d0e1dff152646c739409b8c6d1e31 505 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 235 261 9.2E-13 T 14-10-2018 GYO_0376 dd8d0e1dff152646c739409b8c6d1e31 505 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 301 313 9.2E-13 T 14-10-2018 GYO_0019 f1383e14884a12d883072af68b666213 217 SUPERFAMILY SSF52540 8 213 5.52E-46 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase GYO_0019 f1383e14884a12d883072af68b666213 217 Pfam PF01712 Deoxynucleoside kinase 12 211 3.7E-70 T 14-10-2018 IPR031314 Deoxynucleoside kinase domain GYO_0019 f1383e14884a12d883072af68b666213 217 PIRSF PIRSF000705 1 217 2.9E-68 T 14-10-2018 IPR002624 Deoxynucleoside kinase GO:0005524|GO:0006139|GO:0019206 GYO_0019 f1383e14884a12d883072af68b666213 217 Gene3D G3DSA:3.40.50.300 9 214 1.7E-56 T 14-10-2018 GYO_3669 62ae3bc6cf873e4b46d7e0574827322c 218 Gene3D G3DSA:1.10.10.10 3 78 7.5E-20 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily GYO_3669 62ae3bc6cf873e4b46d7e0574827322c 218 SMART SM00895 87 208 4.7E-10 T 14-10-2018 IPR011711 GntR, C-terminal GYO_3669 62ae3bc6cf873e4b46d7e0574827322c 218 Gene3D G3DSA:1.20.120.530 81 207 2.1E-23 T 14-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal GYO_3669 62ae3bc6cf873e4b46d7e0574827322c 218 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 51 67 1.9E-5 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 GYO_3669 62ae3bc6cf873e4b46d7e0574827322c 218 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 37 51 1.9E-5 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 GYO_3669 62ae3bc6cf873e4b46d7e0574827322c 218 SUPERFAMILY SSF46785 15 100 1.07E-17 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily GYO_3669 62ae3bc6cf873e4b46d7e0574827322c 218 Pfam PF07729 FCD domain 93 202 6.0E-22 T 14-10-2018 IPR011711 GntR, C-terminal GYO_3669 62ae3bc6cf873e4b46d7e0574827322c 218 SUPERFAMILY SSF48008 83 203 1.83E-18 T 14-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal GYO_3669 62ae3bc6cf873e4b46d7e0574827322c 218 Pfam PF00392 Bacterial regulatory proteins, gntR family 21 77 2.9E-15 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 GYO_3669 62ae3bc6cf873e4b46d7e0574827322c 218 SMART SM00345 19 77 1.2E-12 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 GYO_4481 773ad2f52623f1ed271c4a1f203cd851 279 Gene3D G3DSA:2.160.20.100 161 271 1.0E-18 T 14-10-2018 GYO_4481 773ad2f52623f1ed271c4a1f203cd851 279 Pfam PF00805 Pentapeptide repeats (8 copies) 174 213 3.0E-5 T 14-10-2018 IPR001646 Pentapeptide repeat GYO_4481 773ad2f52623f1ed271c4a1f203cd851 279 Pfam PF00805 Pentapeptide repeats (8 copies) 216 251 3.1E-8 T 14-10-2018 IPR001646 Pentapeptide repeat GYO_4481 773ad2f52623f1ed271c4a1f203cd851 279 SUPERFAMILY SSF141571 59 270 3.66E-21 T 14-10-2018 GYO_0915 3225f4d20950004ac821183eef5b97bc 424 PIRSF PIRSF006060 1 414 1.9E-66 T 14-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 GYO_0915 3225f4d20950004ac821183eef5b97bc 424 Pfam PF13520 Amino acid permease 9 399 8.9E-37 T 14-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 GYO_0915 3225f4d20950004ac821183eef5b97bc 424 Gene3D G3DSA:1.20.1740.10 4 423 6.3E-69 T 14-10-2018 GYO_3833 3793fa3a3b26cf12740ec30a49dc9a5d 172 Gene3D G3DSA:2.160.10.10 17 169 2.6E-28 T 14-10-2018 GYO_3833 3793fa3a3b26cf12740ec30a49dc9a5d 172 SUPERFAMILY SSF51161 9 159 3.05E-32 T 14-10-2018 IPR011004 Trimeric LpxA-like superfamily GYO_3833 3793fa3a3b26cf12740ec30a49dc9a5d 172 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 107 139 1.8E-9 T 14-10-2018 IPR001451 Hexapeptide repeat GYO_1437 abc2c9e4a920cce235ddfb03f045eb9c 312 Gene3D G3DSA:3.40.47.10 1 312 4.3E-131 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 GYO_1437 abc2c9e4a920cce235ddfb03f045eb9c 312 Pfam PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III 106 184 3.9E-30 T 14-10-2018 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 GYO_1437 abc2c9e4a920cce235ddfb03f045eb9c 312 Hamap MF_01815 3-oxoacyl-[acyl-carrier-protein] synthase 3 [fabH]. 1 310 71.824 T 14-10-2018 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 GYO_1437 abc2c9e4a920cce235ddfb03f045eb9c 312 TIGRFAM TIGR00747 fabH: 3-oxoacyl-[acyl-carrier-protein] synthase III 1 310 1.4E-147 T 14-10-2018 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 GYO_1437 abc2c9e4a920cce235ddfb03f045eb9c 312 Pfam PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal 221 310 4.8E-36 T 14-10-2018 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 GYO_1437 abc2c9e4a920cce235ddfb03f045eb9c 312 SUPERFAMILY SSF53901 3 310 1.2E-71 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 GYO_3459 2b608af64c9830460b03283a936a4702 770 SMART SM00387 677 770 3.6E-5 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase GYO_3459 2b608af64c9830460b03283a936a4702 770 SUPERFAMILY SSF55874 644 767 1.23E-16 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily GYO_3459 2b608af64c9830460b03283a936a4702 770 Pfam PF07730 Histidine kinase 569 639 4.6E-14 T 14-10-2018 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 GYO_3459 2b608af64c9830460b03283a936a4702 770 Gene3D G3DSA:3.30.565.10 637 770 6.5E-26 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily GYO_3459 2b608af64c9830460b03283a936a4702 770 SUPERFAMILY SSF50156 39 104 5.26E-5 T 14-10-2018 IPR036034 PDZ superfamily GO:0005515 GYO_4389 9e7073c403dc8036b22fa51874a554bf 626 Gene3D G3DSA:1.20.120.790 493 626 1.1E-37 T 14-10-2018 IPR037196 HSP90, C-terminal domain GYO_4389 9e7073c403dc8036b22fa51874a554bf 626 Gene3D G3DSA:3.30.230.80 235 402 8.5E-57 T 14-10-2018 GYO_4389 9e7073c403dc8036b22fa51874a554bf 626 SUPERFAMILY SSF55874 3 209 5.76E-61 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily GYO_4389 9e7073c403dc8036b22fa51874a554bf 626 Pfam PF00183 Hsp90 protein 184 228 2.1E-6 T 14-10-2018 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0051082 GYO_4389 9e7073c403dc8036b22fa51874a554bf 626 Pfam PF00183 Hsp90 protein 216 625 3.1E-116 T 14-10-2018 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0051082 GYO_4389 9e7073c403dc8036b22fa51874a554bf 626 Hamap MF_00505 Chaperone protein HtpG [htpG]. 2 626 27.545 T 14-10-2018 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0051082 GYO_4389 9e7073c403dc8036b22fa51874a554bf 626 SMART SM00387 24 177 0.0026 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase GYO_4389 9e7073c403dc8036b22fa51874a554bf 626 SUPERFAMILY SSF54211 236 488 9.86E-84 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold GYO_4389 9e7073c403dc8036b22fa51874a554bf 626 Pfam PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 26 150 5.6E-13 T 14-10-2018 GYO_4389 9e7073c403dc8036b22fa51874a554bf 626 SUPERFAMILY SSF110942 511 625 1.15E-30 T 14-10-2018 IPR037196 HSP90, C-terminal domain GYO_4389 9e7073c403dc8036b22fa51874a554bf 626 PRINTS PR00775 90kDa heat shock protein signature 2 22 5.5E-54 T 14-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal GYO_4389 9e7073c403dc8036b22fa51874a554bf 626 PRINTS PR00775 90kDa heat shock protein signature 115 137 5.5E-54 T 14-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal GYO_4389 9e7073c403dc8036b22fa51874a554bf 626 PRINTS PR00775 90kDa heat shock protein signature 72 89 5.5E-54 T 14-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal GYO_4389 9e7073c403dc8036b22fa51874a554bf 626 PRINTS PR00775 90kDa heat shock protein signature 188 206 5.5E-54 T 14-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal GYO_4389 9e7073c403dc8036b22fa51874a554bf 626 PRINTS PR00775 90kDa heat shock protein signature 90 107 5.5E-54 T 14-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal GYO_4389 9e7073c403dc8036b22fa51874a554bf 626 PRINTS PR00775 90kDa heat shock protein signature 165 182 5.5E-54 T 14-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal GYO_4389 9e7073c403dc8036b22fa51874a554bf 626 PRINTS PR00775 90kDa heat shock protein signature 23 45 5.5E-54 T 14-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal GYO_4389 9e7073c403dc8036b22fa51874a554bf 626 Gene3D G3DSA:3.40.50.11260 403 488 6.1E-28 T 14-10-2018 GYO_4389 9e7073c403dc8036b22fa51874a554bf 626 PIRSF PIRSF002583 1 626 6.8E-209 T 14-10-2018 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0051082 GYO_4389 9e7073c403dc8036b22fa51874a554bf 626 ProSitePatterns PS00298 Heat shock hsp90 proteins family signature. 22 31 - T 14-10-2018 IPR019805 Heat shock protein Hsp90, conserved site GO:0005524|GO:0006457|GO:0051082 GYO_4389 9e7073c403dc8036b22fa51874a554bf 626 Gene3D G3DSA:3.30.565.10 1 228 9.3E-72 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily GYO_4400 52e038188ff0f81ed614170bf69eb255 356 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 107 118 4.0E-8 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR GYO_4400 52e038188ff0f81ed614170bf69eb255 356 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 161 169 4.0E-8 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR GYO_4400 52e038188ff0f81ed614170bf69eb255 356 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 181 200 4.0E-8 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR GYO_4400 52e038188ff0f81ed614170bf69eb255 356 Pfam PF00106 short chain dehydrogenase 32 224 9.1E-49 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR GYO_4400 52e038188ff0f81ed614170bf69eb255 356 Gene3D G3DSA:3.40.50.720 6 295 2.1E-71 T 14-10-2018 GYO_4400 52e038188ff0f81ed614170bf69eb255 356 SUPERFAMILY SSF51735 25 291 1.21E-67 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily GYO_4400 52e038188ff0f81ed614170bf69eb255 356 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 181 200 1.0E-19 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR GYO_4400 52e038188ff0f81ed614170bf69eb255 356 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 155 171 1.0E-19 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR GYO_4400 52e038188ff0f81ed614170bf69eb255 356 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 107 118 1.0E-19 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR GYO_4400 52e038188ff0f81ed614170bf69eb255 356 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 33 50 1.0E-19 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR GYO_4400 52e038188ff0f81ed614170bf69eb255 356 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 204 221 1.0E-19 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR GYO_4400 52e038188ff0f81ed614170bf69eb255 356 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 168 196 - T 14-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 GYO_2921 660eab908486517d9df0b506882b4a57 278 Pfam PF01374 Glycosyl hydrolase family 46 49 265 1.0E-75 T 14-10-2018 IPR000400 Glycoside hydrolase, family 46 GO:0005576|GO:0005975|GO:0016977 KEGG: 00520+3.2.1.132 GYO_2921 660eab908486517d9df0b506882b4a57 278 ProSitePatterns PS60000 Chitosanases families 46 and 80 active sites signature. 48 88 - T 14-10-2018 IPR000400 Glycoside hydrolase, family 46 GO:0005576|GO:0005975|GO:0016977 KEGG: 00520+3.2.1.132 GYO_2921 660eab908486517d9df0b506882b4a57 278 Gene3D G3DSA:1.20.141.10 44 268 1.1E-77 T 14-10-2018 GYO_2921 660eab908486517d9df0b506882b4a57 278 SUPERFAMILY SSF53955 18 277 2.76E-84 T 14-10-2018 IPR023346 Lysozyme-like domain superfamily GYO_2921 660eab908486517d9df0b506882b4a57 278 PIRSF PIRSF036551 1 278 5.0E-101 T 14-10-2018 IPR000400 Glycoside hydrolase, family 46 GO:0005576|GO:0005975|GO:0016977 KEGG: 00520+3.2.1.132 GYO_2921 660eab908486517d9df0b506882b4a57 278 Gene3D G3DSA:3.30.386.10 60 153 1.1E-77 T 14-10-2018 IPR023099 Glycoside hydrolase, family 46, N-terminal GO:0005975|GO:0016977 KEGG: 00520+3.2.1.132 GYO_2037 fac2d653462274bf79896244f3f9c3ed 786 SUPERFAMILY SSF46785 715 781 9.52E-23 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily GYO_2037 fac2d653462274bf79896244f3f9c3ed 786 Pfam PF01580 FtsK/SpoIIIE family 424 619 3.6E-65 T 14-10-2018 IPR002543 FtsK domain GO:0000166|GO:0003677|GO:0005524 GYO_2037 fac2d653462274bf79896244f3f9c3ed 786 Gene3D G3DSA:3.30.980.40 316 419 1.2E-38 T 14-10-2018 GYO_2037 fac2d653462274bf79896244f3f9c3ed 786 SMART SM00843 714 779 1.6E-40 T 14-10-2018 IPR018541 FtsK gamma domain GYO_2037 fac2d653462274bf79896244f3f9c3ed 786 Gene3D G3DSA:3.40.50.300 421 705 8.4E-111 T 14-10-2018 GYO_2037 fac2d653462274bf79896244f3f9c3ed 786 SUPERFAMILY SSF52540 397 691 3.36E-48 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase GYO_2037 fac2d653462274bf79896244f3f9c3ed 786 Pfam PF09397 Ftsk gamma domain 717 776 1.4E-29 T 14-10-2018 IPR018541 FtsK gamma domain GYO_2037 fac2d653462274bf79896244f3f9c3ed 786 SMART SM00382 459 640 1.3E-4 T 14-10-2018 IPR003593 AAA+ ATPase domain GYO_2037 fac2d653462274bf79896244f3f9c3ed 786 Gene3D G3DSA:1.10.10.10 707 775 3.6E-27 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily GYO_1168 13a95e5e06dfd5b9473554d64d096a65 483 ProSitePatterns PS00438 Catalase proximal active site signature. 43 59 - T 14-10-2018 IPR024708 Catalase active site GO:0004096 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 GYO_1168 13a95e5e06dfd5b9473554d64d096a65 483 Pfam PF06628 Catalase-related immune-responsive 413 475 5.3E-28 T 14-10-2018 IPR010582 Catalase immune-responsive domain KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 GYO_1168 13a95e5e06dfd5b9473554d64d096a65 483 PRINTS PR00067 Catalase signature 288 315 2.9E-77 T 14-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 GYO_1168 13a95e5e06dfd5b9473554d64d096a65 483 PRINTS PR00067 Catalase signature 320 346 2.9E-77 T 14-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 GYO_1168 13a95e5e06dfd5b9473554d64d096a65 483 PRINTS PR00067 Catalase signature 123 141 2.9E-77 T 14-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 GYO_1168 13a95e5e06dfd5b9473554d64d096a65 483 PRINTS PR00067 Catalase signature 83 101 2.9E-77 T 14-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 GYO_1168 13a95e5e06dfd5b9473554d64d096a65 483 PRINTS PR00067 Catalase signature 104 121 2.9E-77 T 14-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 GYO_1168 13a95e5e06dfd5b9473554d64d096a65 483 PRINTS PR00067 Catalase signature 20 43 2.9E-77 T 14-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 GYO_1168 13a95e5e06dfd5b9473554d64d096a65 483 Gene3D G3DSA:2.40.180.10 2 481 2.4E-237 T 14-10-2018 IPR037060 Catalase core domain superfamily GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 GYO_1168 13a95e5e06dfd5b9473554d64d096a65 483 ProSitePatterns PS00437 Catalase proximal heme-ligand signature. 333 341 - T 14-10-2018 IPR002226 Catalase haem-binding site GO:0020037 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 GYO_1168 13a95e5e06dfd5b9473554d64d096a65 483 PIRSF PIRSF038928 1 481 8.4E-230 T 14-10-2018 IPR024711 Catalase, mono-functional, haem-containing, clades 1 and 3 GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 GYO_1168 13a95e5e06dfd5b9473554d64d096a65 483 SMART SM01060 7 391 2.0E-301 T 14-10-2018 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 GYO_1168 13a95e5e06dfd5b9473554d64d096a65 483 SUPERFAMILY SSF56634 4 480 1.31E-221 T 14-10-2018 IPR020835 Catalase superfamily GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 GYO_1168 13a95e5e06dfd5b9473554d64d096a65 483 Pfam PF00199 Catalase 7 388 1.7E-200 T 14-10-2018 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 GYO_1906 9813c0718f63eb6b4cef26c37a3ea3d9 233 PIRSF PIRSF000857 6 233 1.8E-88 T 14-10-2018 IPR004511 Phosphoadenosine phosphosulphate/adenosine 5'-phosphosulphate reductase GO:0004604|GO:0019379|GO:0055114 KEGG: 00920+1.8.4.8 GYO_1906 9813c0718f63eb6b4cef26c37a3ea3d9 233 TIGRFAM TIGR00434 cysH: phosophoadenylyl-sulfate reductase 24 233 1.5E-103 T 14-10-2018 IPR004511 Phosphoadenosine phosphosulphate/adenosine 5'-phosphosulphate reductase GO:0004604|GO:0019379|GO:0055114 KEGG: 00920+1.8.4.8 GYO_1906 9813c0718f63eb6b4cef26c37a3ea3d9 233 SUPERFAMILY SSF52402 20 197 1.62E-53 T 14-10-2018 GYO_1906 9813c0718f63eb6b4cef26c37a3ea3d9 233 Pfam PF01507 Phosphoadenosine phosphosulfate reductase family 38 209 7.8E-56 T 14-10-2018 IPR002500 Phosphoadenosine phosphosulphate reductase GO:0003824 Reactome: R-HSA-196843 GYO_1906 9813c0718f63eb6b4cef26c37a3ea3d9 233 Gene3D G3DSA:3.40.50.620 16 233 2.4E-76 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold GYO_1906 9813c0718f63eb6b4cef26c37a3ea3d9 233 TIGRFAM TIGR02055 APS_reductase: adenylylsulfate reductase, thioredoxin dependent 43 231 3.8E-84 T 14-10-2018 IPR011798 Adenosine 5'-phosphosulphate reductase GO:0004604|GO:0019344|GO:0055114 KEGG: 00920+1.8.4.8 GYO_1906 9813c0718f63eb6b4cef26c37a3ea3d9 233 Hamap MF_00063 Phosphoadenosine phosphosulfate reductase [cysH]. 1 233 42.37 T 14-10-2018 IPR004511 Phosphoadenosine phosphosulphate/adenosine 5'-phosphosulphate reductase GO:0004604|GO:0019379|GO:0055114 KEGG: 00920+1.8.4.8 GYO_0153 0f7263881cf43076c7839f233d9cae60 103 SMART SM00739 2 29 5.3E-7 T 14-10-2018 IPR005824 KOW GYO_0153 0f7263881cf43076c7839f233d9cae60 103 TIGRFAM TIGR01079 rplX_bact: ribosomal protein uL24 1 100 2.9E-42 T 14-10-2018 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 GYO_0153 0f7263881cf43076c7839f233d9cae60 103 Pfam PF00467 KOW motif 5 36 7.3E-10 T 14-10-2018 IPR005824 KOW GYO_0153 0f7263881cf43076c7839f233d9cae60 103 SUPERFAMILY SSF50104 1 100 4.36E-40 T 14-10-2018 IPR008991 Translation protein SH3-like domain superfamily GYO_0153 0f7263881cf43076c7839f233d9cae60 103 Gene3D G3DSA:2.30.30.30 1 100 2.2E-43 T 14-10-2018 IPR014722 Ribosomal protein L2, domain 2 GYO_0153 0f7263881cf43076c7839f233d9cae60 103 Pfam PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 38 100 7.3E-31 T 14-10-2018 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 GYO_0153 0f7263881cf43076c7839f233d9cae60 103 ProSitePatterns PS01108 Ribosomal protein L24 signature. 6 23 - T 14-10-2018 IPR005825 Ribosomal protein L24/L26, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 GYO_0153 0f7263881cf43076c7839f233d9cae60 103 Hamap MF_01326_B 50S ribosomal protein L24 [rplX]. 1 95 23.061 T 14-10-2018 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 GYO_0026 e0fa96c5187192626e3102396549075f 198 Gene3D G3DSA:3.40.1360.10 77 198 5.3E-50 T 14-10-2018 GYO_0026 e0fa96c5187192626e3102396549075f 198 Gene3D G3DSA:1.10.8.420 1 53 4.3E-20 T 14-10-2018 GYO_0026 e0fa96c5187192626e3102396549075f 198 Pfam PF02132 RecR protein 40 78 1.3E-17 T 14-10-2018 IPR023628 Recombination protein RecR, C4-type zinc finger GYO_0026 e0fa96c5187192626e3102396549075f 198 SMART SM00493 80 165 7.7E-20 T 14-10-2018 IPR006171 TOPRIM domain GYO_0026 e0fa96c5187192626e3102396549075f 198 SUPERFAMILY SSF111304 1 198 2.48E-79 T 14-10-2018 IPR023627 Recombination protein RecR GYO_0026 e0fa96c5187192626e3102396549075f 198 ProSitePatterns PS01300 RecR protein signature. 57 78 - T 14-10-2018 IPR015967 Recombination protein RecR, conserved site GO:0006281|GO:0006310 GYO_0026 e0fa96c5187192626e3102396549075f 198 TIGRFAM TIGR00615 recR: recombination protein RecR 1 196 4.5E-92 T 14-10-2018 IPR000093 DNA recombination protein RecR GO:0003677|GO:0006281|GO:0006310 GYO_0026 e0fa96c5187192626e3102396549075f 198 Hamap MF_00017 Recombination protein RecR [recR]. 1 198 112.525 T 14-10-2018 IPR000093 DNA recombination protein RecR GO:0003677|GO:0006281|GO:0006310 GYO_0026 e0fa96c5187192626e3102396549075f 198 Pfam PF13662 Toprim domain 80 171 6.8E-26 T 14-10-2018 IPR006171 TOPRIM domain GYO_2778 7f1ee28737c74a5561ed9c1e9cd3e246 438 SMART SM00487 23 223 1.7E-53 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain GYO_2778 7f1ee28737c74a5561ed9c1e9cd3e246 438 Hamap MF_01494 DEAD-box ATP-dependent RNA helicase CshB [cshB]. 4 437 50.711 T 14-10-2018 IPR030881 DEAD-box ATP-dependent RNA helicase CshB GO:0004386|GO:0009409 GYO_2778 7f1ee28737c74a5561ed9c1e9cd3e246 438 Pfam PF00270 DEAD/DEAH box helicase 28 195 5.7E-42 T 14-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 GYO_2778 7f1ee28737c74a5561ed9c1e9cd3e246 438 SMART SM00490 259 340 2.7E-30 T 14-10-2018 IPR001650 Helicase, C-terminal GYO_2778 7f1ee28737c74a5561ed9c1e9cd3e246 438 Gene3D G3DSA:3.40.50.300 214 438 6.5E-46 T 14-10-2018 GYO_2778 7f1ee28737c74a5561ed9c1e9cd3e246 438 Gene3D G3DSA:3.40.50.300 2 213 7.7E-66 T 14-10-2018 GYO_2778 7f1ee28737c74a5561ed9c1e9cd3e246 438 SUPERFAMILY SSF52540 35 349 6.72E-62 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase GYO_2778 7f1ee28737c74a5561ed9c1e9cd3e246 438 Pfam PF00271 Helicase conserved C-terminal domain 234 340 6.2E-27 T 14-10-2018 IPR001650 Helicase, C-terminal GYO_4032 a9b82fcfbf8dfb2a107611853635567e 233 Pfam PF00005 ABC transporter 17 162 9.5E-34 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 GYO_4032 a9b82fcfbf8dfb2a107611853635567e 233 SMART SM00382 26 212 9.1E-11 T 14-10-2018 IPR003593 AAA+ ATPase domain GYO_4032 a9b82fcfbf8dfb2a107611853635567e 233 Gene3D G3DSA:3.40.50.300 1 229 7.5E-62 T 14-10-2018 GYO_4032 a9b82fcfbf8dfb2a107611853635567e 233 TIGRFAM TIGR03410 urea_trans_UrtE: urea ABC transporter, ATP-binding protein UrtE 3 233 2.5E-91 T 14-10-2018 IPR017780 ABC transporter, urea, ATP-binding protein, UrtE GYO_4032 a9b82fcfbf8dfb2a107611853635567e 233 SUPERFAMILY SSF52540 2 223 1.91E-57 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase GYO_4381 c60a3caf40a2c600d295de67297cbf04 325 Pfam PF00294 pfkB family carbohydrate kinase 12 313 1.4E-71 T 14-10-2018 IPR011611 Carbohydrate kinase PfkB GYO_4381 c60a3caf40a2c600d295de67297cbf04 325 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 265 278 - T 14-10-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 GYO_4381 c60a3caf40a2c600d295de67297cbf04 325 TIGRFAM TIGR04382 myo_inos_iolC_N: 5-dehydro-2-deoxygluconokinase 11 320 9.2E-122 T 14-10-2018 IPR030830 5-Dehydro-2-deoxygluconokinase KEGG: 00562+2.7.1.92 GYO_4381 c60a3caf40a2c600d295de67297cbf04 325 SUPERFAMILY SSF53613 11 321 1.48E-74 T 14-10-2018 IPR029056 Ribokinase-like GYO_4381 c60a3caf40a2c600d295de67297cbf04 325 Hamap MF_01668 5-dehydro-2-deoxygluconokinase [iolC]. 7 325 56.579 T 14-10-2018 IPR022841 5-dehydro-2-deoxygluconokinase, Firmicutes GO:0016310|GO:0047590 KEGG: 00562+2.7.1.92 GYO_4381 c60a3caf40a2c600d295de67297cbf04 325 Gene3D G3DSA:2.20.150.10 19 115 1.1E-104 T 14-10-2018 IPR023314 5-Dehydro-2-deoxygluconokinase-like superfamily KEGG: 00562+2.7.1.92 GYO_4381 c60a3caf40a2c600d295de67297cbf04 325 Gene3D G3DSA:3.40.1190.20 14 300 1.1E-104 T 14-10-2018 IPR029056 Ribokinase-like GYO_3087 8cae6c39ae27257092ec8df22b529a9d 74 Gene3D G3DSA:1.10.10.10 1 74 7.5E-30 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily GYO_3087 8cae6c39ae27257092ec8df22b529a9d 74 SUPERFAMILY SSF46894 8 72 3.4E-23 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 GYO_3087 8cae6c39ae27257092ec8df22b529a9d 74 ProSitePatterns PS00622 LuxR-type HTH domain signature. 26 53 - T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 GYO_3087 8cae6c39ae27257092ec8df22b529a9d 74 Pfam PF00196 Bacterial regulatory proteins, luxR family 12 64 3.4E-24 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 GYO_3087 8cae6c39ae27257092ec8df22b529a9d 74 SMART SM00421 9 66 3.9E-25 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 GYO_3087 8cae6c39ae27257092ec8df22b529a9d 74 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 26 42 1.2E-12 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 GYO_3087 8cae6c39ae27257092ec8df22b529a9d 74 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 42 54 1.2E-12 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 GYO_3087 8cae6c39ae27257092ec8df22b529a9d 74 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 12 26 1.2E-12 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 GYO_3936 76a8cae45cb175d89c38f9c8f0638e8e 623 Gene3D G3DSA:3.40.50.12580 419 595 3.7E-70 T 14-10-2018 GYO_3936 76a8cae45cb175d89c38f9c8f0638e8e 623 SUPERFAMILY SSF53756 310 607 3.27E-19 T 14-10-2018 GYO_3936 76a8cae45cb175d89c38f9c8f0638e8e 623 Pfam PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase 251 608 1.8E-86 T 14-10-2018 IPR007554 CDP-glycerol glycerophosphotransferase GO:0016020|GO:0047355 GYO_3936 76a8cae45cb175d89c38f9c8f0638e8e 623 Gene3D G3DSA:3.40.50.11820 257 602 3.7E-70 T 14-10-2018 GYO_2529 7d615d8e3738290bd72524241de8ba17 194 PIRSF PIRSF029008 1 194 5.0E-63 T 14-10-2018 IPR008681 Negative regulator of genetic competence, MecA GYO_2529 7d615d8e3738290bd72524241de8ba17 194 Hamap MF_01124 Adapter protein MecA [mecA]. 1 193 24.626 T 14-10-2018 IPR008681 Negative regulator of genetic competence, MecA GYO_2529 7d615d8e3738290bd72524241de8ba17 194 Gene3D G3DSA:3.30.70.1950 104 194 3.8E-33 T 14-10-2018 IPR038471 MecA, C-terminal domain superfamily GYO_2529 7d615d8e3738290bd72524241de8ba17 194 Pfam PF05389 Negative regulator of genetic competence (MecA) 1 88 3.5E-25 T 14-10-2018 IPR008681 Negative regulator of genetic competence, MecA GYO_2529 7d615d8e3738290bd72524241de8ba17 194 Pfam PF05389 Negative regulator of genetic competence (MecA) 85 189 1.3E-14 T 14-10-2018 IPR008681 Negative regulator of genetic competence, MecA GYO_0570 b24e2467bd5d9bc6886c55b73c98866e 224 SUPERFAMILY SSF56214 1 96 2.09E-28 T 14-10-2018 IPR037143 4'-phosphopantetheinyl transferase domain superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 GYO_0570 b24e2467bd5d9bc6886c55b73c98866e 224 Gene3D G3DSA:3.90.470.20 104 206 8.7E-87 T 14-10-2018 IPR037143 4'-phosphopantetheinyl transferase domain superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 GYO_0570 b24e2467bd5d9bc6886c55b73c98866e 224 Gene3D G3DSA:3.90.470.20 13 220 8.7E-87 T 14-10-2018 IPR037143 4'-phosphopantetheinyl transferase domain superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 GYO_0570 b24e2467bd5d9bc6886c55b73c98866e 224 SUPERFAMILY SSF56214 102 222 1.11E-31 T 14-10-2018 IPR037143 4'-phosphopantetheinyl transferase domain superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 GYO_0570 b24e2467bd5d9bc6886c55b73c98866e 224 Pfam PF01648 4'-phosphopantetheinyl transferase superfamily 103 205 4.1E-18 T 14-10-2018 IPR008278 4'-phosphopantetheinyl transferase domain GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 GYO_0570 b24e2467bd5d9bc6886c55b73c98866e 224 TIGRFAM TIGR00556 pantethn_trn: phosphopantetheine--protein transferase domain 101 224 4.0E-31 T 14-10-2018 IPR004568 Phosphopantetheine-protein transferase domain GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289 GYO_3183 5acff22c5d4ccecf14dc2393b1e2b4df 439 SUPERFAMILY SSF54631 182 307 1.14E-30 T 14-10-2018 GYO_3183 5acff22c5d4ccecf14dc2393b1e2b4df 439 Gene3D G3DSA:3.10.580.10 186 314 7.8E-25 T 14-10-2018 GYO_3183 5acff22c5d4ccecf14dc2393b1e2b4df 439 Gene3D G3DSA:3.40.1390.20 70 178 3.4E-26 T 14-10-2018 IPR028979 HPr(Ser) kinase/phosphorylase-like, N-terminal domain superfamily GYO_3183 5acff22c5d4ccecf14dc2393b1e2b4df 439 Gene3D G3DSA:1.10.10.10 5 69 2.7E-6 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily GYO_3183 5acff22c5d4ccecf14dc2393b1e2b4df 439 Pfam PF07085 DRTGG domain 76 178 1.0E-28 T 14-10-2018 IPR010766 DRTGG KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 GYO_3183 5acff22c5d4ccecf14dc2393b1e2b4df 439 Pfam PF03061 Thioesterase superfamily 353 423 2.5E-9 T 14-10-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 GYO_3183 5acff22c5d4ccecf14dc2393b1e2b4df 439 SMART SM00116 259 307 6.8E-9 T 14-10-2018 IPR000644 CBS domain GYO_3183 5acff22c5d4ccecf14dc2393b1e2b4df 439 SMART SM00116 200 248 1.2 T 14-10-2018 IPR000644 CBS domain GYO_3183 5acff22c5d4ccecf14dc2393b1e2b4df 439 SUPERFAMILY SSF46785 5 54 3.48E-6 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily GYO_3183 5acff22c5d4ccecf14dc2393b1e2b4df 439 SUPERFAMILY SSF75138 72 185 2.75E-29 T 14-10-2018 IPR028979 HPr(Ser) kinase/phosphorylase-like, N-terminal domain superfamily GYO_3183 5acff22c5d4ccecf14dc2393b1e2b4df 439 Pfam PF00392 Bacterial regulatory proteins, gntR family 15 58 4.9E-5 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 GYO_3183 5acff22c5d4ccecf14dc2393b1e2b4df 439 Pfam PF00571 CBS domain 253 307 2.7E-8 T 14-10-2018 IPR000644 CBS domain GYO_3183 5acff22c5d4ccecf14dc2393b1e2b4df 439 Pfam PF00571 CBS domain 191 244 1.0E-7 T 14-10-2018 IPR000644 CBS domain GYO_3183 5acff22c5d4ccecf14dc2393b1e2b4df 439 Gene3D G3DSA:3.10.129.10 327 435 4.4E-10 T 14-10-2018 GYO_3183 5acff22c5d4ccecf14dc2393b1e2b4df 439 SUPERFAMILY SSF54637 335 433 1.65E-17 T 14-10-2018 IPR029069 HotDog domain superfamily GYO_0991 a231d1ab6e82894f667b81ac6f4031f3 305 Pfam PF03407 Nucleotide-diphospho-sugar transferase 35 201 6.3E-6 T 14-10-2018 IPR005069 Nucleotide-diphospho-sugar transferase GYO_0991 a231d1ab6e82894f667b81ac6f4031f3 305 SUPERFAMILY SSF53448 6 287 2.31E-23 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases GYO_3797 24579709d1e7d6be6409c395cc63e1d3 316 Gene3D G3DSA:3.40.50.2300 74 307 5.8E-49 T 14-10-2018 GYO_3797 24579709d1e7d6be6409c395cc63e1d3 316 SUPERFAMILY SSF47413 1 59 3.09E-17 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 GYO_3797 24579709d1e7d6be6409c395cc63e1d3 316 Pfam PF13377 Periplasmic binding protein-like domain 158 315 3.9E-32 T 14-10-2018 GYO_3797 24579709d1e7d6be6409c395cc63e1d3 316 Gene3D G3DSA:3.40.50.2300 148 313 5.8E-49 T 14-10-2018 GYO_3797 24579709d1e7d6be6409c395cc63e1d3 316 SMART SM00354 1 71 5.1E-33 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 GYO_3797 24579709d1e7d6be6409c395cc63e1d3 316 Gene3D G3DSA:1.10.260.40 3 59 3.0E-21 T 14-10-2018 GYO_3797 24579709d1e7d6be6409c395cc63e1d3 316 SUPERFAMILY SSF53822 71 315 1.88E-47 T 14-10-2018 IPR028082 Periplasmic binding protein-like I GYO_3797 24579709d1e7d6be6409c395cc63e1d3 316 ProSitePatterns PS00356 LacI-type HTH domain signature. 4 22 - T 14-10-2018 GYO_3797 24579709d1e7d6be6409c395cc63e1d3 316 Pfam PF00356 Bacterial regulatory proteins, lacI family 3 48 4.2E-20 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 GYO_3797 24579709d1e7d6be6409c395cc63e1d3 316 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 3 13 2.2E-5 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 GYO_3797 24579709d1e7d6be6409c395cc63e1d3 316 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 13 23 2.2E-5 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 GYO_1218 8626edcb3ea732e206d4bab0710e1689 554 Pfam PF16901 C-terminal domain of alpha-glycerophosphate oxidase 405 533 3.7E-25 T 14-10-2018 IPR031656 Alpha-glycerophosphate oxidase, C-terminal KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 GYO_1218 8626edcb3ea732e206d4bab0710e1689 554 ProSitePatterns PS00978 FAD-dependent glycerol-3-phosphate dehydrogenase signature 2. 373 383 - T 14-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 GYO_1218 8626edcb3ea732e206d4bab0710e1689 554 ProSitePatterns PS00977 FAD-dependent glycerol-3-phosphate dehydrogenase signature 1. 27 44 - T 14-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 GYO_1218 8626edcb3ea732e206d4bab0710e1689 554 Gene3D G3DSA:3.50.50.60 20 381 1.4E-137 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily GYO_1218 8626edcb3ea732e206d4bab0710e1689 554 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 51 63 1.5E-30 T 14-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 GYO_1218 8626edcb3ea732e206d4bab0710e1689 554 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 35 45 1.5E-30 T 14-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 GYO_1218 8626edcb3ea732e206d4bab0710e1689 554 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 368 380 1.5E-30 T 14-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 GYO_1218 8626edcb3ea732e206d4bab0710e1689 554 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 22 34 1.5E-30 T 14-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 GYO_1218 8626edcb3ea732e206d4bab0710e1689 554 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 96 108 1.5E-30 T 14-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 GYO_1218 8626edcb3ea732e206d4bab0710e1689 554 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 338 344 1.5E-30 T 14-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 GYO_1218 8626edcb3ea732e206d4bab0710e1689 554 Pfam PF01266 FAD dependent oxidoreductase 23 352 1.1E-51 T 14-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 GYO_1218 8626edcb3ea732e206d4bab0710e1689 554 Gene3D G3DSA:3.30.9.10 104 345 1.4E-137 T 14-10-2018 GYO_1218 8626edcb3ea732e206d4bab0710e1689 554 SUPERFAMILY SSF51905 17 396 2.11E-33 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily GYO_1218 8626edcb3ea732e206d4bab0710e1689 554 Gene3D G3DSA:1.10.8.870 421 552 9.6E-45 T 14-10-2018 IPR038299 Alpha-glycerophosphate oxidase, C-terminal domain superfamily KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 GYO_1218 8626edcb3ea732e206d4bab0710e1689 554 SUPERFAMILY SSF54373 251 344 2.35E-11 T 14-10-2018 GYO_4349 862496aacd8abc3dc24f9cbe80605de0 223 Hamap MF_00114 Deoxyribose-phosphate aldolase [deoC]. 1 216 36.764 T 14-10-2018 IPR028581 Deoxyribose-phosphate aldolase type I GO:0004139 KEGG: 00030+4.1.2.4|MetaCyc: PWY-7180 GYO_4349 862496aacd8abc3dc24f9cbe80605de0 223 TIGRFAM TIGR00126 deoC: deoxyribose-phosphate aldolase 3 212 1.7E-98 T 14-10-2018 IPR011343 Deoxyribose-phosphate aldolase GO:0004139|GO:0005737|GO:0009264 KEGG: 00030+4.1.2.4|MetaCyc: PWY-7180|Reactome: R-HSA-6798695|Reactome: R-HSA-71336 GYO_4349 862496aacd8abc3dc24f9cbe80605de0 223 SMART SM01133 2 214 6.3E-99 T 14-10-2018 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 Reactome: R-HSA-6798695|Reactome: R-HSA-71336 GYO_4349 862496aacd8abc3dc24f9cbe80605de0 223 SUPERFAMILY SSF51569 2 214 6.59E-81 T 14-10-2018 GYO_4349 862496aacd8abc3dc24f9cbe80605de0 223 Pfam PF01791 DeoC/LacD family aldolase 10 211 4.3E-23 T 14-10-2018 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 Reactome: R-HSA-6798695|Reactome: R-HSA-71336 GYO_4349 862496aacd8abc3dc24f9cbe80605de0 223 Gene3D G3DSA:3.20.20.70 1 220 3.0E-94 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 GYO_4349 862496aacd8abc3dc24f9cbe80605de0 223 PIRSF PIRSF001357 1 222 3.5E-75 T 14-10-2018 IPR011343 Deoxyribose-phosphate aldolase GO:0004139|GO:0005737|GO:0009264 KEGG: 00030+4.1.2.4|MetaCyc: PWY-7180|Reactome: R-HSA-6798695|Reactome: R-HSA-71336 GYO_3772 e9d9ab551bdb9499d9f58648e2c075ff 152 Gene3D G3DSA:1.10.260.40 1 112 1.2E-20 T 14-10-2018 GYO_3772 e9d9ab551bdb9499d9f58648e2c075ff 152 SUPERFAMILY SSF47406 124 148 4.32E-5 T 14-10-2018 IPR036281 SinR repressor/SinI anti-repressor, dimerisation domain superfamily GO:0006355|GO:0046983 GYO_3772 e9d9ab551bdb9499d9f58648e2c075ff 152 Pfam PF08671 Anti-repressor SinI 124 148 6.5E-9 T 14-10-2018 IPR010981 SinR repressor/SinI anti-repressor, dimerisation domain GO:0006355|GO:0046983 GYO_3772 e9d9ab551bdb9499d9f58648e2c075ff 152 SMART SM00530 5 61 9.0E-16 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 GYO_3772 e9d9ab551bdb9499d9f58648e2c075ff 152 Pfam PF01381 Helix-turn-helix 6 61 5.7E-17 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 GYO_3772 e9d9ab551bdb9499d9f58648e2c075ff 152 SUPERFAMILY SSF47413 2 65 9.12E-17 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 GYO_0040 52d53220a7c7e93ff524e2d1b6812c09 329 SUPERFAMILY SSF52540 11 197 2.89E-43 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase GYO_0040 52d53220a7c7e93ff524e2d1b6812c09 329 TIGRFAM TIGR00678 holB: DNA polymerase III, delta' subunit 17 200 4.4E-67 T 14-10-2018 IPR004622 DNA polymerase III, delta prime subunit GO:0003887|GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 GYO_0040 52d53220a7c7e93ff524e2d1b6812c09 329 Pfam PF09115 DNA polymerase III, delta subunit, C terminal 240 321 3.1E-6 T 14-10-2018 IPR015199 DNA polymerase III, delta subunit, C-terminal GO:0003677|GO:0003887|GO:0006260|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 GYO_0040 52d53220a7c7e93ff524e2d1b6812c09 329 Pfam PF13177 DNA polymerase III, delta subunit 12 169 4.2E-59 T 14-10-2018 GYO_0040 52d53220a7c7e93ff524e2d1b6812c09 329 Gene3D G3DSA:3.40.50.300 8 169 6.1E-53 T 14-10-2018 GYO_2653 eb8427d41855172e28c07a629f07f81d 364 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 286 297 1.7E-22 T 14-10-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 GYO_2653 eb8427d41855172e28c07a629f07f81d 364 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 132 154 1.7E-22 T 14-10-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 GYO_2653 eb8427d41855172e28c07a629f07f81d 364 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 176 196 1.7E-22 T 14-10-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 GYO_2653 eb8427d41855172e28c07a629f07f81d 364 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 66 80 1.7E-22 T 14-10-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 GYO_2653 eb8427d41855172e28c07a629f07f81d 364 Pfam PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase 217 298 5.9E-10 T 14-10-2018 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 GYO_2653 eb8427d41855172e28c07a629f07f81d 364 Pfam PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase 148 200 1.3E-6 T 14-10-2018 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 GYO_2653 eb8427d41855172e28c07a629f07f81d 364 SUPERFAMILY SSF53223 4 143 3.84E-50 T 14-10-2018 GYO_2653 eb8427d41855172e28c07a629f07f81d 364 Gene3D G3DSA:3.40.50.720 134 336 1.6E-154 T 14-10-2018 GYO_2653 eb8427d41855172e28c07a629f07f81d 364 Pfam PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain 22 131 1.9E-28 T 14-10-2018 IPR006097 Glutamate/phenylalanine/leucine/valine dehydrogenase, dimerisation domain GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 GYO_2653 eb8427d41855172e28c07a629f07f81d 364 Gene3D G3DSA:3.40.50.10860 10 343 1.6E-154 T 14-10-2018 GYO_2653 eb8427d41855172e28c07a629f07f81d 364 ProSitePatterns PS00074 Glu / Leu / Phe / Val dehydrogenases active site. 74 87 - T 14-10-2018 IPR033524 Leu/Phe/Val dehydrogenases active site Reactome: R-HSA-2151201|Reactome: R-HSA-70614 GYO_2653 eb8427d41855172e28c07a629f07f81d 364 SMART SM00839 144 351 1.5E-73 T 14-10-2018 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 GYO_2653 eb8427d41855172e28c07a629f07f81d 364 SUPERFAMILY SSF51735 141 348 1.01E-59 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily GYO_2653 eb8427d41855172e28c07a629f07f81d 364 PIRSF PIRSF000188 1 353 8.9E-169 T 14-10-2018 IPR016211 Glutamate/phenylalanine/leucine/valine dehydrogenase, bacterial/archaeal GO:0016639|GO:0055114 GYO_1324 5a538ae0cb8224e30eb27ff5b9b3f146 214 SUPERFAMILY SSF51735 1 205 1.54E-41 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily GYO_1324 5a538ae0cb8224e30eb27ff5b9b3f146 214 Pfam PF13460 NAD(P)H-binding 7 190 7.4E-48 T 14-10-2018 IPR016040 NAD(P)-binding domain GYO_1324 5a538ae0cb8224e30eb27ff5b9b3f146 214 Gene3D G3DSA:3.40.50.720 2 214 1.0E-53 T 14-10-2018 GYO_1037 aadaf53255130c4c8976e35eb4162888 452 Gene3D G3DSA:3.30.1360.60 379 452 2.1E-25 T 14-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 GYO_1037 aadaf53255130c4c8976e35eb4162888 452 SUPERFAMILY SSF55604 381 449 5.75E-21 T 14-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 GYO_1037 aadaf53255130c4c8976e35eb4162888 452 TIGRFAM TIGR01998 PTS-II-BC-nag: PTS system, N-acetylglucosamine-specific IIBC component 1 448 6.4E-179 T 14-10-2018 IPR010974 Phosphotransferase system, N-acetylglucosamine-specific IIBC component GO:0008982|GO:0009401|GO:0015572|GO:0016021|GO:0019866 GYO_1037 aadaf53255130c4c8976e35eb4162888 452 Pfam PF00367 phosphotransferase system, EIIB 382 412 3.8E-14 T 14-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 GYO_1037 aadaf53255130c4c8976e35eb4162888 452 TIGRFAM TIGR00826 EIIB_glc: PTS system, glucose-like IIB component 351 437 5.9E-19 T 14-10-2018 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 GYO_1037 aadaf53255130c4c8976e35eb4162888 452 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 390 407 - T 14-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 GYO_1037 aadaf53255130c4c8976e35eb4162888 452 Pfam PF02378 Phosphotransferase system, EIIC 9 293 5.7E-81 T 14-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 GYO_0694 5396896eaf7387a9b740d758a0e95fbc 262 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 223 249 - T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 GYO_0694 5396896eaf7387a9b740d758a0e95fbc 262 SUPERFAMILY SSF88659 181 254 2.99E-17 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like GYO_0694 5396896eaf7387a9b740d758a0e95fbc 262 TIGRFAM TIGR02980 SigBFG: RNA polymerase sigma-70 factor, sigma-B/F/G subfamily 28 253 5.1E-89 T 14-10-2018 IPR014322 RNA polymerase sigma-B/F/G type GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 GYO_0694 5396896eaf7387a9b740d758a0e95fbc 262 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 30 253 1.3E-34 T 14-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 GYO_0694 5396896eaf7387a9b740d758a0e95fbc 262 PRINTS PR00046 Major sigma-70 factor signature 223 238 7.4E-9 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 GYO_0694 5396896eaf7387a9b740d758a0e95fbc 262 PRINTS PR00046 Major sigma-70 factor signature 58 71 7.4E-9 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 GYO_0694 5396896eaf7387a9b740d758a0e95fbc 262 PRINTS PR00046 Major sigma-70 factor signature 238 249 7.4E-9 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 GYO_0694 5396896eaf7387a9b740d758a0e95fbc 262 PRINTS PR00046 Major sigma-70 factor signature 206 218 7.4E-9 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 GYO_0694 5396896eaf7387a9b740d758a0e95fbc 262 Gene3D G3DSA:1.20.120.1810 1 102 6.9E-15 T 14-10-2018 GYO_0694 5396896eaf7387a9b740d758a0e95fbc 262 Pfam PF04539 Sigma-70 region 3 113 187 2.3E-18 T 14-10-2018 IPR007624 RNA polymerase sigma-70 region 3 GO:0003700|GO:0006352|GO:0006355 GYO_0694 5396896eaf7387a9b740d758a0e95fbc 262 Gene3D G3DSA:1.10.10.10 104 156 6.1E-16 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily GYO_0694 5396896eaf7387a9b740d758a0e95fbc 262 TIGRFAM TIGR02941 Sigma_B: RNA polymerase sigma-B factor 1 253 1.9E-123 T 14-10-2018 IPR014288 RNA polymerase sigma-B factor GO:0016987 GYO_0694 5396896eaf7387a9b740d758a0e95fbc 262 Pfam PF04545 Sigma-70, region 4 202 251 5.5E-17 T 14-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 GYO_0694 5396896eaf7387a9b740d758a0e95fbc 262 Pfam PF04542 Sigma-70 region 2 34 103 2.9E-12 T 14-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 GYO_0694 5396896eaf7387a9b740d758a0e95fbc 262 Gene3D G3DSA:1.10.10.10 181 256 5.2E-13 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily GYO_0694 5396896eaf7387a9b740d758a0e95fbc 262 SUPERFAMILY SSF88946 4 103 7.06E-27 T 14-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 GYO_0694 5396896eaf7387a9b740d758a0e95fbc 262 SUPERFAMILY SSF88659 107 180 2.22E-14 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like GYO_0931 25464bbe1602b44ade512ed1ce33d589 485 Pfam PF01425 Amidase 24 465 3.3E-164 T 14-10-2018 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 GYO_0931 25464bbe1602b44ade512ed1ce33d589 485 Gene3D G3DSA:3.90.1300.10 2 485 1.9E-203 T 14-10-2018 IPR036928 Amidase signature (AS) superfamily KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 GYO_0931 25464bbe1602b44ade512ed1ce33d589 485 TIGRFAM TIGR00132 gatA: aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, A subunit 11 477 9.8E-214 T 14-10-2018 IPR004412 Glutamyl-tRNA(Gln) amidotransferase A subunit GO:0006412|GO:0030956|GO:0050567 KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 GYO_0931 25464bbe1602b44ade512ed1ce33d589 485 SUPERFAMILY SSF75304 1 483 1.22E-170 T 14-10-2018 IPR036928 Amidase signature (AS) superfamily KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 GYO_0931 25464bbe1602b44ade512ed1ce33d589 485 Hamap MF_00120 Glutamyl-tRNA(Gln) amidotransferase subunit A [gatA]. 11 477 96.684 T 14-10-2018 IPR004412 Glutamyl-tRNA(Gln) amidotransferase A subunit GO:0006412|GO:0030956|GO:0050567 KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 GYO_0931 25464bbe1602b44ade512ed1ce33d589 485 ProSitePatterns PS00571 Amidases signature. 152 183 - T 14-10-2018 IPR020556 Amidase, conserved site KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921|Reactome: R-HSA-2142753 GYO_1634 3ce5c2e243dd069f629bb1c87502bfd6 147 SMART SM00347 31 129 1.1E-27 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 GYO_1634 3ce5c2e243dd069f629bb1c87502bfd6 147 Gene3D G3DSA:1.10.10.10 1 147 4.4E-43 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily GYO_1634 3ce5c2e243dd069f629bb1c87502bfd6 147 PRINTS PR00598 Bacterial regulatory protein MarR family signature 55 71 2.2E-7 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 GYO_1634 3ce5c2e243dd069f629bb1c87502bfd6 147 PRINTS PR00598 Bacterial regulatory protein MarR family signature 91 107 2.2E-7 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 GYO_1634 3ce5c2e243dd069f629bb1c87502bfd6 147 PRINTS PR00598 Bacterial regulatory protein MarR family signature 72 87 2.2E-7 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 GYO_1634 3ce5c2e243dd069f629bb1c87502bfd6 147 Pfam PF01047 MarR family 39 96 1.3E-19 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 GYO_1634 3ce5c2e243dd069f629bb1c87502bfd6 147 SUPERFAMILY SSF46785 8 143 4.53E-36 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily GYO_0747 04147c725a4153a52fe1583e3e1adeb7 91 TIGRFAM TIGR01003 PTS_HPr_family: phosphocarrier, HPr family 1 83 3.2E-23 T 14-10-2018 IPR000032 Phosphocarrier protein HPr-like GYO_0747 04147c725a4153a52fe1583e3e1adeb7 91 PRINTS PR00107 Phosphocarrier protein signature 41 56 1.6E-9 T 14-10-2018 IPR000032 Phosphocarrier protein HPr-like GYO_0747 04147c725a4153a52fe1583e3e1adeb7 91 PRINTS PR00107 Phosphocarrier protein signature 12 28 1.6E-9 T 14-10-2018 IPR000032 Phosphocarrier protein HPr-like GYO_0747 04147c725a4153a52fe1583e3e1adeb7 91 PRINTS PR00107 Phosphocarrier protein signature 56 73 1.6E-9 T 14-10-2018 IPR000032 Phosphocarrier protein HPr-like GYO_0747 04147c725a4153a52fe1583e3e1adeb7 91 Gene3D G3DSA:3.30.1340.10 1 90 2.0E-26 T 14-10-2018 IPR035895 HPr-like superfamily GYO_0747 04147c725a4153a52fe1583e3e1adeb7 91 SUPERFAMILY SSF55594 1 84 1.57E-19 T 14-10-2018 IPR035895 HPr-like superfamily GYO_0747 04147c725a4153a52fe1583e3e1adeb7 91 Pfam PF00381 PTS HPr component phosphorylation site 3 84 1.3E-19 T 14-10-2018 IPR000032 Phosphocarrier protein HPr-like GYO_1358 8303f5e7216aa63884dc312b35011b1b 281 Gene3D G3DSA:3.40.50.1000 155 281 8.9E-17 T 14-10-2018 IPR023214 HAD superfamily GYO_1358 8303f5e7216aa63884dc312b35011b1b 281 SUPERFAMILY SSF56784 18 280 2.76E-30 T 14-10-2018 IPR036412 HAD-like superfamily GYO_1358 8303f5e7216aa63884dc312b35011b1b 281 Pfam PF05116 Sucrose-6F-phosphate phosphohydrolase 20 257 6.4E-24 T 14-10-2018 IPR006380 Sucrose-phosphatase-like, N-terminal GYO_1358 8303f5e7216aa63884dc312b35011b1b 281 ProSitePatterns PS01229 Hypothetical cof family signature 2. 230 252 - T 14-10-2018 GYO_1358 8303f5e7216aa63884dc312b35011b1b 281 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 21 246 1.7E-22 T 14-10-2018 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: R-HSA-446205 GYO_1358 8303f5e7216aa63884dc312b35011b1b 281 Gene3D G3DSA:3.40.50.1000 1 149 9.1E-43 T 14-10-2018 IPR023214 HAD superfamily GYO_1131 1ef18811714ccce352094bc6720d0bd2 389 Gene3D G3DSA:1.10.1670.10 39 242 4.9E-87 T 14-10-2018 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal Reactome: R-HSA-110357 GYO_1131 1ef18811714ccce352094bc6720d0bd2 389 Gene3D G3DSA:1.10.340.30 50 161 4.9E-87 T 14-10-2018 GYO_1131 1ef18811714ccce352094bc6720d0bd2 389 Pfam PF14815 NUDIX domain 264 377 1.6E-23 T 14-10-2018 IPR029119 MutY, C-terminal Reactome: R-HSA-110330|Reactome: R-HSA-110331|Reactome: R-HSA-110357 GYO_1131 1ef18811714ccce352094bc6720d0bd2 389 SUPERFAMILY SSF55811 249 379 4.4E-25 T 14-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 GYO_1131 1ef18811714ccce352094bc6720d0bd2 389 SMART SM00478 68 219 1.6E-54 T 14-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 GYO_1131 1ef18811714ccce352094bc6720d0bd2 389 Gene3D G3DSA:3.90.79.10 260 386 4.5E-28 T 14-10-2018 GYO_1131 1ef18811714ccce352094bc6720d0bd2 389 SMART SM00525 220 240 0.0012 T 14-10-2018 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif GO:0051539 Reactome: R-HSA-110357 GYO_1131 1ef18811714ccce352094bc6720d0bd2 389 TIGRFAM TIGR01084 mutY: A/G-specific adenine glycosylase 36 302 2.1E-119 T 14-10-2018 IPR005760 A/G-specific adenine glycosylase MutY GO:0006284|GO:0019104 GYO_1131 1ef18811714ccce352094bc6720d0bd2 389 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 64 195 1.8E-21 T 14-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 GYO_1131 1ef18811714ccce352094bc6720d0bd2 389 SUPERFAMILY SSF48150 33 251 1.33E-70 T 14-10-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 GYO_3461 81ec7016858c2db19d9c5189cbeecdb8 289 SUPERFAMILY SSF48576 32 269 3.29E-31 T 14-10-2018 IPR008949 Isoprenoid synthase domain superfamily GYO_3461 81ec7016858c2db19d9c5189cbeecdb8 289 Gene3D G3DSA:1.10.600.10 8 288 1.5E-28 T 14-10-2018 IPR008949 Isoprenoid synthase domain superfamily GYO_3461 81ec7016858c2db19d9c5189cbeecdb8 289 Pfam PF00348 Polyprenyl synthetase 45 196 1.8E-16 T 14-10-2018 IPR000092 Polyprenyl synthetase GO:0008299 GYO_3872 a01fe035cd0b8a5062dc028fce245f15 841 SMART SM00957 5 382 3.7E-281 T 14-10-2018 IPR011115 SecA DEAD-like, N-terminal GO:0005524|GO:0016020|GO:0017038 GYO_3872 a01fe035cd0b8a5062dc028fce245f15 841 Pfam PF07516 SecA Wing and Scaffold domain 568 778 8.4E-64 T 14-10-2018 IPR011116 SecA Wing/Scaffold GO:0016020|GO:0017038 GYO_3872 a01fe035cd0b8a5062dc028fce245f15 841 Pfam PF02810 SEC-C motif 821 839 7.7E-8 T 14-10-2018 IPR004027 SEC-C motif GYO_3872 a01fe035cd0b8a5062dc028fce245f15 841 Gene3D G3DSA:1.10.3060.10 571 777 0.0 T 14-10-2018 GYO_3872 a01fe035cd0b8a5062dc028fce245f15 841 SUPERFAMILY SSF81767 225 348 1.14E-46 T 14-10-2018 IPR036670 SecA, preprotein cross-linking domain superfamily GO:0016020|GO:0017038 GYO_3872 a01fe035cd0b8a5062dc028fce245f15 841 ProSitePatterns PS01312 SecA family signature. 480 495 - T 14-10-2018 IPR020937 SecA conserved site GO:0006605|GO:0006886|GO:0016020 GYO_3872 a01fe035cd0b8a5062dc028fce245f15 841 Gene3D G3DSA:3.40.50.300 14 396 0.0 T 14-10-2018 GYO_3872 a01fe035cd0b8a5062dc028fce245f15 841 SMART SM00958 226 338 2.1E-67 T 14-10-2018 IPR011130 SecA, preprotein cross-linking domain GO:0016020|GO:0017038 GYO_3872 a01fe035cd0b8a5062dc028fce245f15 841 SUPERFAMILY SSF81886 571 829 1.83E-77 T 14-10-2018 IPR036266 SecA, Wing/Scaffold superfamily GYO_3872 a01fe035cd0b8a5062dc028fce245f15 841 Pfam PF07517 SecA DEAD-like domain 6 382 3.0E-128 T 14-10-2018 IPR011115 SecA DEAD-like, N-terminal GO:0005524|GO:0016020|GO:0017038 GYO_3872 a01fe035cd0b8a5062dc028fce245f15 841 SUPERFAMILY SSF52540 6 395 5.7E-84 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase GYO_3872 a01fe035cd0b8a5062dc028fce245f15 841 SUPERFAMILY SSF52540 397 568 1.54E-52 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase GYO_3872 a01fe035cd0b8a5062dc028fce245f15 841 Pfam PF01043 SecA preprotein cross-linking domain 230 338 8.3E-42 T 14-10-2018 IPR011130 SecA, preprotein cross-linking domain GO:0016020|GO:0017038 GYO_3872 a01fe035cd0b8a5062dc028fce245f15 841 Gene3D G3DSA:3.90.1440.10 227 348 0.0 T 14-10-2018 GYO_3872 a01fe035cd0b8a5062dc028fce245f15 841 Gene3D G3DSA:1.10.1200.230 621 705 0.0 T 14-10-2018 GYO_3872 a01fe035cd0b8a5062dc028fce245f15 841 PRINTS PR00906 SecA protein signature 99 113 1.6E-71 T 14-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 GYO_3872 a01fe035cd0b8a5062dc028fce245f15 841 PRINTS PR00906 SecA protein signature 168 188 1.6E-71 T 14-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 GYO_3872 a01fe035cd0b8a5062dc028fce245f15 841 PRINTS PR00906 SecA protein signature 61 85 1.6E-71 T 14-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 GYO_3872 a01fe035cd0b8a5062dc028fce245f15 841 PRINTS PR00906 SecA protein signature 356 373 1.6E-71 T 14-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 GYO_3872 a01fe035cd0b8a5062dc028fce245f15 841 PRINTS PR00906 SecA protein signature 115 125 1.6E-71 T 14-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 GYO_3872 a01fe035cd0b8a5062dc028fce245f15 841 PRINTS PR00906 SecA protein signature 393 406 1.6E-71 T 14-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 GYO_3872 a01fe035cd0b8a5062dc028fce245f15 841 PRINTS PR00906 SecA protein signature 319 341 1.6E-71 T 14-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 GYO_3872 a01fe035cd0b8a5062dc028fce245f15 841 TIGRFAM TIGR00963 secA: preprotein translocase, SecA subunit 26 496 1.9E-244 T 14-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 GYO_3872 a01fe035cd0b8a5062dc028fce245f15 841 Gene3D G3DSA:3.40.50.300 397 570 0.0 T 14-10-2018 GYO_3872 a01fe035cd0b8a5062dc028fce245f15 841 Hamap MF_01382 Protein translocase subunit SecA [secA]. 4 781 19.647 T 14-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 GYO_1411 3b0142c82dfc47be7d5f1faa4949d31d 283 Gene3D G3DSA:2.20.28.50 28 62 5.3E-47 T 14-10-2018 GYO_1411 3b0142c82dfc47be7d5f1faa4949d31d 283 Gene3D G3DSA:3.30.1180.10 156 283 4.3E-48 T 14-10-2018 GYO_1411 3b0142c82dfc47be7d5f1faa4949d31d 283 SUPERFAMILY SSF82549 1 283 4.45E-91 T 14-10-2018 GYO_1411 3b0142c82dfc47be7d5f1faa4949d31d 283 Gene3D G3DSA:3.40.50.10440 5 136 5.3E-47 T 14-10-2018 GYO_1411 3b0142c82dfc47be7d5f1faa4949d31d 283 TIGRFAM TIGR00762 DegV: EDD domain protein, DegV family 4 280 1.7E-95 T 14-10-2018 IPR003797 DegV GYO_1411 3b0142c82dfc47be7d5f1faa4949d31d 283 Pfam PF02645 Uncharacterised protein, DegV family COG1307 3 282 2.6E-91 T 14-10-2018 IPR003797 DegV GYO_3150 db75b1a18a9d320abac9585a628da25d 152 Hamap MF_00440 Transcriptional repressor NrdR [nrdR]. 1 152 85.689 T 14-10-2018 IPR003796 Ribonucleotide reductase regulator NrdR-like GO:0008270|GO:0045892 GYO_3150 db75b1a18a9d320abac9585a628da25d 152 TIGRFAM TIGR00244 TIGR00244: transcriptional regulator NrdR 1 147 1.0E-77 T 14-10-2018 IPR003796 Ribonucleotide reductase regulator NrdR-like GO:0008270|GO:0045892 GYO_3150 db75b1a18a9d320abac9585a628da25d 152 Pfam PF03477 ATP cone domain 50 136 2.0E-17 T 14-10-2018 IPR005144 ATP-cone domain Reactome: R-HSA-499943 GYO_2534 d7bfeef06a2ed9fc3106b07df8793fe6 496 Pfam PF00271 Helicase conserved C-terminal domain 215 323 1.2E-17 T 14-10-2018 IPR001650 Helicase, C-terminal GYO_2534 d7bfeef06a2ed9fc3106b07df8793fe6 496 SMART SM00490 242 324 4.8E-24 T 14-10-2018 IPR001650 Helicase, C-terminal GYO_2534 d7bfeef06a2ed9fc3106b07df8793fe6 496 ProSitePatterns PS00690 DEAH-box subfamily ATP-dependent helicases signature. 131 140 - T 14-10-2018 IPR002464 DNA/RNA helicase, ATP-dependent, DEAH-box type, conserved site GYO_2534 d7bfeef06a2ed9fc3106b07df8793fe6 496 Pfam PF00270 DEAD/DEAH box helicase 20 179 5.6E-22 T 14-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 GYO_2534 d7bfeef06a2ed9fc3106b07df8793fe6 496 SUPERFAMILY SSF52540 57 346 3.35E-57 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase GYO_2534 d7bfeef06a2ed9fc3106b07df8793fe6 496 SMART SM00487 13 208 2.7E-29 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain GYO_2534 d7bfeef06a2ed9fc3106b07df8793fe6 496 Gene3D G3DSA:3.40.50.300 1 197 5.4E-74 T 14-10-2018 GYO_2534 d7bfeef06a2ed9fc3106b07df8793fe6 496 TIGRFAM TIGR00614 recQ_fam: ATP-dependent DNA helicase, RecQ family 7 380 2.9E-113 T 14-10-2018 IPR004589 DNA helicase, ATP-dependent, RecQ type GO:0006310|GO:0008026 GYO_4083 1365da38ab99dd43f9381595b4f6c7c4 66 PRINTS PR01249 Ribosomal protein L31 signature 2 19 3.6E-22 T 14-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 GYO_4083 1365da38ab99dd43f9381595b4f6c7c4 66 PRINTS PR01249 Ribosomal protein L31 signature 30 45 3.6E-22 T 14-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 GYO_4083 1365da38ab99dd43f9381595b4f6c7c4 66 PRINTS PR01249 Ribosomal protein L31 signature 45 63 3.6E-22 T 14-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 GYO_4083 1365da38ab99dd43f9381595b4f6c7c4 66 Gene3D G3DSA:2.30.170.50 1 66 5.0E-32 T 14-10-2018 GYO_4083 1365da38ab99dd43f9381595b4f6c7c4 66 ProSitePatterns PS01143 Ribosomal protein L31 signature. 34 55 - T 14-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 GYO_4083 1365da38ab99dd43f9381595b4f6c7c4 66 SUPERFAMILY SSF143800 1 65 1.96E-25 T 14-10-2018 IPR034704 L28p-like Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 GYO_4083 1365da38ab99dd43f9381595b4f6c7c4 66 TIGRFAM TIGR00105 L31: ribosomal protein bL31 1 65 4.4E-31 T 14-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 GYO_4083 1365da38ab99dd43f9381595b4f6c7c4 66 Pfam PF01197 Ribosomal protein L31 1 64 1.7E-31 T 14-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 GYO_4083 1365da38ab99dd43f9381595b4f6c7c4 66 Hamap MF_00501 50S ribosomal protein L31 [rpmE]. 1 66 28.649 T 14-10-2018 IPR027491 Ribosomal protein L31 type A GO:0003735|GO:0005622|GO:0005840|GO:0006412 GYO_1639 ffb1c0735add40d39269f8483cdd0503 762 SUPERFAMILY SSF51726 397 756 1.03E-117 T 14-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 GYO_1639 ffb1c0735add40d39269f8483cdd0503 762 Pfam PF01717 Cobalamin-independent synthase, Catalytic domain 430 752 4.3E-159 T 14-10-2018 IPR002629 Cobalamin-independent methionine synthase MetE, C-terminal/archaeal GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 GYO_1639 ffb1c0735add40d39269f8483cdd0503 762 Pfam PF08267 Cobalamin-independent synthase, N-terminal domain 6 310 4.6E-115 T 14-10-2018 IPR013215 Cobalamin-independent methionine synthase MetE, N-terminal GO:0003871|GO:0008270|GO:0008652 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 GYO_1639 ffb1c0735add40d39269f8483cdd0503 762 Hamap MF_00172 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [metE]. 4 757 33.691 T 14-10-2018 IPR006276 Cobalamin-independent methionine synthase GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 GYO_1639 ffb1c0735add40d39269f8483cdd0503 762 PIRSF PIRSF000382 3 761 0.0 T 14-10-2018 IPR006276 Cobalamin-independent methionine synthase GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 GYO_1639 ffb1c0735add40d39269f8483cdd0503 762 Gene3D G3DSA:3.20.20.210 388 755 0.0 T 14-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 GYO_1639 ffb1c0735add40d39269f8483cdd0503 762 SUPERFAMILY SSF51726 6 385 1.24E-88 T 14-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 GYO_1639 ffb1c0735add40d39269f8483cdd0503 762 Gene3D G3DSA:3.20.20.210 8 523 0.0 T 14-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 GYO_1639 ffb1c0735add40d39269f8483cdd0503 762 TIGRFAM TIGR01371 met_syn_B12ind: 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase 9 757 0.0 T 14-10-2018 IPR006276 Cobalamin-independent methionine synthase GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 GYO_1785 b55ba90ce355ce9c1914581e2381b435 428 SMART SM00086 149 191 2.0E-8 T 14-10-2018 IPR001610 PAC motif GYO_1785 b55ba90ce355ce9c1914581e2381b435 428 SMART SM00387 320 426 1.4E-33 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase GYO_1785 b55ba90ce355ce9c1914581e2381b435 428 Pfam PF00989 PAS fold 79 188 5.0E-21 T 14-10-2018 IPR013767 PAS fold GO:0006355 GYO_1785 b55ba90ce355ce9c1914581e2381b435 428 Gene3D G3DSA:3.30.565.10 279 428 4.7E-43 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily GYO_1785 b55ba90ce355ce9c1914581e2381b435 428 SUPERFAMILY SSF55785 83 194 9.57E-20 T 14-10-2018 IPR035965 PAS domain superfamily GYO_1785 b55ba90ce355ce9c1914581e2381b435 428 SMART SM00091 78 145 4.0E-6 T 14-10-2018 IPR000014 PAS domain GYO_1785 b55ba90ce355ce9c1914581e2381b435 428 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 320 425 9.2E-23 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase GYO_1785 b55ba90ce355ce9c1914581e2381b435 428 Gene3D G3DSA:3.30.450.20 79 210 7.2E-24 T 14-10-2018 GYO_1785 b55ba90ce355ce9c1914581e2381b435 428 SUPERFAMILY SSF55874 267 424 2.88E-39 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily GYO_1785 b55ba90ce355ce9c1914581e2381b435 428 PRINTS PR00344 Bacterial sensor protein C-terminal signature 375 385 3.7E-16 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 GYO_1785 b55ba90ce355ce9c1914581e2381b435 428 PRINTS PR00344 Bacterial sensor protein C-terminal signature 357 371 3.7E-16 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 GYO_1785 b55ba90ce355ce9c1914581e2381b435 428 PRINTS PR00344 Bacterial sensor protein C-terminal signature 386 404 3.7E-16 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 GYO_1785 b55ba90ce355ce9c1914581e2381b435 428 PRINTS PR00344 Bacterial sensor protein C-terminal signature 410 423 3.7E-16 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 GYO_1785 b55ba90ce355ce9c1914581e2381b435 428 SUPERFAMILY SSF47384 200 275 1.08E-12 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 GYO_1785 b55ba90ce355ce9c1914581e2381b435 428 Pfam PF00512 His Kinase A (phospho-acceptor) domain 216 275 1.4E-13 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 GYO_1785 b55ba90ce355ce9c1914581e2381b435 428 SMART SM00388 214 277 2.5E-13 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 GYO_1785 b55ba90ce355ce9c1914581e2381b435 428 Gene3D G3DSA:1.10.287.130 217 274 1.9E-13 T 14-10-2018 GYO_1785 b55ba90ce355ce9c1914581e2381b435 428 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 82 198 2.2E-17 T 14-10-2018 IPR000014 PAS domain GYO_4460 0eb563f0066e2b98eb4c5821f4432c06 138 SUPERFAMILY SSF54593 6 133 4.54E-19 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase GYO_4460 0eb563f0066e2b98eb4c5821f4432c06 138 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 15 129 1.3E-11 T 14-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain GYO_4460 0eb563f0066e2b98eb4c5821f4432c06 138 Gene3D G3DSA:3.10.180.10 1 138 4.3E-57 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase GYO_3143 3fa37ccd5be25e750e07d6af77c98039 593 Gene3D G3DSA:3.30.565.10 433 589 1.9E-17 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily GYO_3143 3fa37ccd5be25e750e07d6af77c98039 593 SUPERFAMILY SSF55781 243 364 1.18E-7 T 14-10-2018 GYO_3143 3fa37ccd5be25e750e07d6af77c98039 593 SMART SM00065 238 373 9.1E-13 T 14-10-2018 IPR003018 GAF domain GO:0005515 GYO_3143 3fa37ccd5be25e750e07d6af77c98039 593 SMART SM00387 471 580 3.6E-7 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase GYO_3143 3fa37ccd5be25e750e07d6af77c98039 593 Gene3D G3DSA:3.30.450.40 241 364 1.5E-6 T 14-10-2018 IPR029016 GAF-like domain superfamily GYO_3143 3fa37ccd5be25e750e07d6af77c98039 593 Pfam PF06580 Histidine kinase 378 455 1.9E-23 T 14-10-2018 IPR010559 Signal transduction histidine kinase, internal region GO:0000155|GO:0000160|GO:0016021 GYO_3143 3fa37ccd5be25e750e07d6af77c98039 593 Pfam PF15714 Stage V sporulation protein T C-terminal, transcription factor 242 364 6.8E-7 T 14-10-2018 IPR039472 Sporulation stage V protein T, GAF domain GYO_3143 3fa37ccd5be25e750e07d6af77c98039 593 SUPERFAMILY SSF55874 433 579 1.83E-15 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily GYO_3143 3fa37ccd5be25e750e07d6af77c98039 593 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 477 579 1.1E-12 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase GYO_3143 3fa37ccd5be25e750e07d6af77c98039 593 Pfam PF07694 5TMR of 5TMR-LYT 25 207 3.6E-58 T 14-10-2018 IPR011620 Signal transduction histidine kinase, 5TM receptor LytS, transmembrane region GO:0000155|GO:0000160|GO:0004673|GO:0016021|GO:0071555 GYO_1851 9b8e73ec16d5571c075b210f21d3924b 415 Pfam PF05636 HIGH Nucleotidyl Transferase 1 386 1.9E-137 T 14-10-2018 IPR008513 Uncharacterised protein family UPF0348 GYO_1851 9b8e73ec16d5571c075b210f21d3924b 415 Hamap MF_01539 UPF0348 protein . 2 404 40.835 T 14-10-2018 IPR008513 Uncharacterised protein family UPF0348 GYO_1851 9b8e73ec16d5571c075b210f21d3924b 415 SUPERFAMILY SSF52374 10 235 3.85E-18 T 14-10-2018 GYO_1851 9b8e73ec16d5571c075b210f21d3924b 415 Gene3D G3DSA:3.40.50.620 1 157 8.3E-40 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold GYO_1461 98c81cd35ece5427e8a256ba634dc190 132 Gene3D G3DSA:1.10.490.10 1 132 7.3E-57 T 14-10-2018 IPR012292 Globin/Protoglobin GO:0019825|GO:0020037 GYO_1461 98c81cd35ece5427e8a256ba634dc190 132 SUPERFAMILY SSF46458 8 124 7.74E-39 T 14-10-2018 IPR009050 Globin-like superfamily GYO_1461 98c81cd35ece5427e8a256ba634dc190 132 Pfam PF01152 Bacterial-like globin 9 122 9.5E-32 T 14-10-2018 IPR001486 Truncated hemoglobin GO:0019825 GYO_1461 98c81cd35ece5427e8a256ba634dc190 132 ProSitePatterns PS01213 Protozoan/cyanobacterial globins signature. 52 76 - T 14-10-2018 IPR019795 Globin, bacterial-like, conserved site GO:0015671|GO:0019825 GYO_3033 51a92f06621fa8f388655ec69b450c76 192 Pfam PF14682 Sporulation initiation phospho-transferase B, C-terminal 74 185 2.9E-37 T 14-10-2018 IPR016122 Sporulation initiation phosphotransferase B, C-terminal GYO_3033 51a92f06621fa8f388655ec69b450c76 192 Pfam PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain 17 71 2.2E-21 T 14-10-2018 IPR039506 SpoOB, alpha-helical domain GYO_3033 51a92f06621fa8f388655ec69b450c76 192 Gene3D G3DSA:3.30.565.30 72 190 2.2E-44 T 14-10-2018 IPR037100 Sporulation initiation phosphotransferase B, C-terminal domain superfamily GYO_3033 51a92f06621fa8f388655ec69b450c76 192 SMART SM01317 73 187 2.1E-64 T 14-10-2018 IPR016122 Sporulation initiation phosphotransferase B, C-terminal GYO_3033 51a92f06621fa8f388655ec69b450c76 192 Gene3D G3DSA:1.10.287.130 1 71 5.8E-33 T 14-10-2018 GYO_3033 51a92f06621fa8f388655ec69b450c76 192 SUPERFAMILY SSF55890 15 190 6.15E-67 T 14-10-2018 IPR016120 Signal transduction histidine kinase, sporulation regulator SpoOB GO:0000155|GO:0000160|GO:0016772 GYO_4302 ecafff5c7363e5991658ba8e2f9d480e 257 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 139 167 - T 14-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 GYO_4302 ecafff5c7363e5991658ba8e2f9d480e 257 TIGRFAM TIGR01963 PHB_DH: 3-hydroxybutyrate dehydrogenase 3 257 2.6E-117 T 14-10-2018 IPR011294 3-hydroxybutyrate dehydrogenase GO:0003858|GO:0055114 GYO_4302 ecafff5c7363e5991658ba8e2f9d480e 257 SUPERFAMILY SSF51735 2 256 1.85E-85 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily GYO_4302 ecafff5c7363e5991658ba8e2f9d480e 257 Gene3D G3DSA:3.40.50.720 1 257 2.0E-83 T 14-10-2018 GYO_4302 ecafff5c7363e5991658ba8e2f9d480e 257 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 152 171 6.8E-12 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR GYO_4302 ecafff5c7363e5991658ba8e2f9d480e 257 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 79 90 6.8E-12 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR GYO_4302 ecafff5c7363e5991658ba8e2f9d480e 257 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 132 140 6.8E-12 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR GYO_4302 ecafff5c7363e5991658ba8e2f9d480e 257 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 10 255 2.0E-67 T 14-10-2018 GYO_4302 ecafff5c7363e5991658ba8e2f9d480e 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 79 90 5.0E-41 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR GYO_4302 ecafff5c7363e5991658ba8e2f9d480e 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 5 22 5.0E-41 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR GYO_4302 ecafff5c7363e5991658ba8e2f9d480e 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 152 171 5.0E-41 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR GYO_4302 ecafff5c7363e5991658ba8e2f9d480e 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 126 142 5.0E-41 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR GYO_4302 ecafff5c7363e5991658ba8e2f9d480e 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 173 190 5.0E-41 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR GYO_4302 ecafff5c7363e5991658ba8e2f9d480e 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 218 238 5.0E-41 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR GYO_3534 1b949ad4368240be3d0d023664e74489 446 Gene3D G3DSA:3.20.20.140 54 414 7.7E-144 T 14-10-2018 GYO_3534 1b949ad4368240be3d0d023664e74489 446 TIGRFAM TIGR03178 allantoinase: allantoinase 4 444 8.4E-197 T 14-10-2018 IPR017593 Allantoinase GO:0000256|GO:0004038|GO:0008270|GO:0050897 KEGG: 00230+3.5.2.5|MetaCyc: PWY-5697|MetaCyc: PWY-5698 GYO_3534 1b949ad4368240be3d0d023664e74489 446 SUPERFAMILY SSF51556 55 376 1.15E-94 T 14-10-2018 IPR032466 Metal-dependent hydrolase GYO_3534 1b949ad4368240be3d0d023664e74489 446 Hamap MF_01645 Allantoinase [allB]. 2 445 52.627 T 14-10-2018 IPR017593 Allantoinase GO:0000256|GO:0004038|GO:0008270|GO:0050897 KEGG: 00230+3.5.2.5|MetaCyc: PWY-5697|MetaCyc: PWY-5698 GYO_3534 1b949ad4368240be3d0d023664e74489 446 SUPERFAMILY SSF51338 3 438 5.64E-27 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 GYO_3534 1b949ad4368240be3d0d023664e74489 446 Gene3D G3DSA:2.30.40.10 5 429 7.7E-144 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 GYO_3534 1b949ad4368240be3d0d023664e74489 446 Pfam PF01979 Amidohydrolase family 51 427 5.1E-25 T 14-10-2018 IPR006680 Amidohydrolase-related GO:0016787 GYO_1545 4779673c6b3fc7b7fa58f76d44411a8f 422 Gene3D G3DSA:1.20.1250.20 2 190 1.1E-46 T 14-10-2018 GYO_1545 4779673c6b3fc7b7fa58f76d44411a8f 422 Gene3D G3DSA:1.20.1250.20 205 406 4.9E-31 T 14-10-2018 GYO_1545 4779673c6b3fc7b7fa58f76d44411a8f 422 Pfam PF07690 Major Facilitator Superfamily 13 369 7.5E-57 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 GYO_1545 4779673c6b3fc7b7fa58f76d44411a8f 422 TIGRFAM TIGR00893 2A0114: D-galactonate transporter 15 404 1.9E-124 T 14-10-2018 GYO_1545 4779673c6b3fc7b7fa58f76d44411a8f 422 SUPERFAMILY SSF103473 4 411 3.4E-81 T 14-10-2018 IPR036259 MFS transporter superfamily GYO_1747 76d860b223d475dc5a4de81d3f19f3d8 63 ProDom PD054279 YKZF 6 63 3.0E-26 T 14-10-2018 GYO_1747 76d860b223d475dc5a4de81d3f19f3d8 63 Pfam PF14156 Antirepressor AbbA 2 62 1.0E-33 T 14-10-2018 IPR025446 Antirepressor AbbA GYO_3915 ae8f84f2c2646dc3c88b7f18820e5f18 495 SUPERFAMILY SSF53187 321 495 2.23E-56 T 14-10-2018 GYO_3915 ae8f84f2c2646dc3c88b7f18820e5f18 495 Gene3D G3DSA:3.40.50.12090 52 148 2.2E-6 T 14-10-2018 GYO_3915 ae8f84f2c2646dc3c88b7f18820e5f18 495 SMART SM00646 381 492 5.5E-47 T 14-10-2018 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 GYO_3915 ae8f84f2c2646dc3c88b7f18820e5f18 495 Gene3D G3DSA:3.40.630.40 320 495 5.3E-62 T 14-10-2018 GYO_3915 ae8f84f2c2646dc3c88b7f18820e5f18 495 Pfam PF01520 N-acetylmuramoyl-L-alanine amidase 323 492 7.2E-54 T 14-10-2018 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 GYO_3915 ae8f84f2c2646dc3c88b7f18820e5f18 495 Pfam PF04122 Putative cell wall binding repeat 2 224 310 1.8E-15 T 14-10-2018 IPR007253 Putative cell wall binding repeat 2 GYO_3915 ae8f84f2c2646dc3c88b7f18820e5f18 495 Pfam PF04122 Putative cell wall binding repeat 2 130 215 4.2E-15 T 14-10-2018 IPR007253 Putative cell wall binding repeat 2 GYO_3915 ae8f84f2c2646dc3c88b7f18820e5f18 495 Pfam PF04122 Putative cell wall binding repeat 2 30 116 7.5E-17 T 14-10-2018 IPR007253 Putative cell wall binding repeat 2 GYO_1450 2f24d0b6b6061a59147c219e22c01537 355 Pfam PF00005 ABC transporter 25 183 4.8E-29 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 GYO_1450 2f24d0b6b6061a59147c219e22c01537 355 Gene3D G3DSA:3.40.50.300 1 329 8.6E-98 T 14-10-2018 GYO_1450 2f24d0b6b6061a59147c219e22c01537 355 SMART SM00382 33 241 7.8E-17 T 14-10-2018 IPR003593 AAA+ ATPase domain GYO_1450 2f24d0b6b6061a59147c219e22c01537 355 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 233 319 2.9E-19 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 GYO_1450 2f24d0b6b6061a59147c219e22c01537 355 ProSitePatterns PS00211 ABC transporters family signature. 156 170 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 GYO_1450 2f24d0b6b6061a59147c219e22c01537 355 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 235 298 4.0E-12 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 GYO_1450 2f24d0b6b6061a59147c219e22c01537 355 SUPERFAMILY SSF52540 4 254 3.43E-73 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase GYO_3555 990d9dd76ee3b8594dac6067f1c1cb35 367 Pfam PF00005 ABC transporter 20 161 2.1E-30 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 GYO_3555 990d9dd76ee3b8594dac6067f1c1cb35 367 SUPERFAMILY SSF50331 236 365 1.02E-27 T 14-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal GYO_3555 990d9dd76ee3b8594dac6067f1c1cb35 367 Pfam PF08402 TOBE domain 285 358 2.2E-8 T 14-10-2018 IPR013611 Transport-associated OB, type 2 GO:0005524|GO:0022857|GO:0043190|GO:0055085 GYO_3555 990d9dd76ee3b8594dac6067f1c1cb35 367 Gene3D G3DSA:2.40.50.100 239 365 1.0E-26 T 14-10-2018 GYO_3555 990d9dd76ee3b8594dac6067f1c1cb35 367 ProSitePatterns PS00211 ABC transporters family signature. 134 148 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 GYO_3555 990d9dd76ee3b8594dac6067f1c1cb35 367 Gene3D G3DSA:2.40.50.140 305 350 1.0E-26 T 14-10-2018 GYO_3555 990d9dd76ee3b8594dac6067f1c1cb35 367 SMART SM00382 28 211 3.6E-14 T 14-10-2018 IPR003593 AAA+ ATPase domain GYO_3555 990d9dd76ee3b8594dac6067f1c1cb35 367 Gene3D G3DSA:3.40.50.300 1 238 1.6E-73 T 14-10-2018 GYO_3555 990d9dd76ee3b8594dac6067f1c1cb35 367 SUPERFAMILY SSF52540 4 242 1.44E-85 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase GYO_4332 99f494a580490d9d5faa3dde5a7c35c0 148 PRINTS PR01438 Universal stress protein signature 108 120 2.4E-22 T 14-10-2018 IPR006015 Universal stress protein A GYO_4332 99f494a580490d9d5faa3dde5a7c35c0 148 PRINTS PR01438 Universal stress protein signature 2 20 2.4E-22 T 14-10-2018 IPR006015 Universal stress protein A GYO_4332 99f494a580490d9d5faa3dde5a7c35c0 148 PRINTS PR01438 Universal stress protein signature 126 148 2.4E-22 T 14-10-2018 IPR006015 Universal stress protein A GYO_4332 99f494a580490d9d5faa3dde5a7c35c0 148 Pfam PF00582 Universal stress protein family 1 148 3.2E-35 T 14-10-2018 IPR006016 UspA GYO_4332 99f494a580490d9d5faa3dde5a7c35c0 148 Gene3D G3DSA:3.40.50.620 1 148 7.1E-43 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold GYO_4332 99f494a580490d9d5faa3dde5a7c35c0 148 SUPERFAMILY SSF52402 2 148 2.18E-40 T 14-10-2018 GYO_4332 99f494a580490d9d5faa3dde5a7c35c0 148 PIRSF PIRSF006276 1 148 1.3E-18 T 14-10-2018 IPR006015 Universal stress protein A GYO_1417 cddd9b8dc3b37a4553d23610e6393f7e 255 SUPERFAMILY SSF53474 24 255 8.17E-35 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold GYO_1417 cddd9b8dc3b37a4553d23610e6393f7e 255 Pfam PF00326 Prolyl oligopeptidase family 87 254 5.3E-13 T 14-10-2018 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 GYO_1417 cddd9b8dc3b37a4553d23610e6393f7e 255 Gene3D G3DSA:3.40.50.1820 1 255 4.6E-59 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold GYO_3706 4451638cccaac136e505ec6f4f80b426 379 SUPERFAMILY SSF52540 1 241 1.82E-79 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase GYO_3706 4451638cccaac136e505ec6f4f80b426 379 ProSitePatterns PS00211 ABC transporters family signature. 136 150 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 GYO_3706 4451638cccaac136e505ec6f4f80b426 379 TIGRFAM TIGR01186 proV: glycine betaine/L-proline transport ATP binding subunit 13 371 8.1E-187 T 14-10-2018 IPR005892 Glycine betaine transport ATP-binding subunit GO:0005524|GO:0016020|GO:0031460 GYO_3706 4451638cccaac136e505ec6f4f80b426 379 Gene3D G3DSA:3.40.50.300 1 240 8.4E-76 T 14-10-2018 GYO_3706 4451638cccaac136e505ec6f4f80b426 379 SMART SM00116 258 306 2.3E-8 T 14-10-2018 IPR000644 CBS domain GYO_3706 4451638cccaac136e505ec6f4f80b426 379 SMART SM00116 318 366 1.2E-8 T 14-10-2018 IPR000644 CBS domain GYO_3706 4451638cccaac136e505ec6f4f80b426 379 Pfam PF00571 CBS domain 251 297 3.4E-9 T 14-10-2018 IPR000644 CBS domain GYO_3706 4451638cccaac136e505ec6f4f80b426 379 Pfam PF00571 CBS domain 311 363 8.1E-8 T 14-10-2018 IPR000644 CBS domain GYO_3706 4451638cccaac136e505ec6f4f80b426 379 Pfam PF00005 ABC transporter 19 163 5.7E-33 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 GYO_3706 4451638cccaac136e505ec6f4f80b426 379 Gene3D G3DSA:3.10.580.10 247 372 3.6E-36 T 14-10-2018 GYO_3706 4451638cccaac136e505ec6f4f80b426 379 SMART SM00382 27 221 7.0E-22 T 14-10-2018 IPR003593 AAA+ ATPase domain GYO_3706 4451638cccaac136e505ec6f4f80b426 379 SUPERFAMILY SSF54631 250 374 9.88E-26 T 14-10-2018 GYO_2530 adfc9976fe85bcb7db242f2d9c6535f6 259 Gene3D G3DSA:3.60.21.10 47 234 1.8E-24 T 14-10-2018 IPR029052 Metallo-dependent phosphatase-like GYO_2530 adfc9976fe85bcb7db242f2d9c6535f6 259 Pfam PF00149 Calcineurin-like phosphoesterase 48 204 2.3E-14 T 14-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 GYO_2530 adfc9976fe85bcb7db242f2d9c6535f6 259 SUPERFAMILY SSF56300 44 257 5.63E-37 T 14-10-2018 GYO_1721 650e31702d40c265dd0731bc645ada17 321 SUPERFAMILY SSF47413 1 59 2.36E-17 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 GYO_1721 650e31702d40c265dd0731bc645ada17 321 Pfam PF13377 Periplasmic binding protein-like domain 165 321 3.1E-27 T 14-10-2018 GYO_1721 650e31702d40c265dd0731bc645ada17 321 SUPERFAMILY SSF53822 59 310 6.28E-56 T 14-10-2018 IPR028082 Periplasmic binding protein-like I GYO_1721 650e31702d40c265dd0731bc645ada17 321 SMART SM00354 1 71 2.4E-32 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 GYO_1721 650e31702d40c265dd0731bc645ada17 321 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 13 23 4.3E-6 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 GYO_1721 650e31702d40c265dd0731bc645ada17 321 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 3 13 4.3E-6 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 GYO_1721 650e31702d40c265dd0731bc645ada17 321 Gene3D G3DSA:3.40.50.2300 156 283 2.0E-56 T 14-10-2018 GYO_1721 650e31702d40c265dd0731bc645ada17 321 Pfam PF00356 Bacterial regulatory proteins, lacI family 3 48 2.0E-20 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 GYO_1721 650e31702d40c265dd0731bc645ada17 321 ProSitePatterns PS00356 LacI-type HTH domain signature. 4 22 - T 14-10-2018 GYO_1721 650e31702d40c265dd0731bc645ada17 321 Gene3D G3DSA:3.40.50.2300 62 301 2.0E-56 T 14-10-2018 GYO_1721 650e31702d40c265dd0731bc645ada17 321 Gene3D G3DSA:1.10.260.40 1 58 2.0E-21 T 14-10-2018 GYO_4114 a2315dffefa7e74a8d736aa7e25d5582 556 Gene3D G3DSA:3.30.1360.70 3 113 4.9E-30 T 14-10-2018 IPR036695 Arginyl tRNA synthetase N-terminal domain superfamily GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19 GYO_4114 a2315dffefa7e74a8d736aa7e25d5582 556 Gene3D G3DSA:3.40.50.620 124 431 2.0E-178 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold GYO_4114 a2315dffefa7e74a8d736aa7e25d5582 556 Pfam PF05746 DALR anticodon binding domain 438 556 5.9E-39 T 14-10-2018 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 GYO_4114 a2315dffefa7e74a8d736aa7e25d5582 556 Pfam PF00750 tRNA synthetases class I (R) 104 400 4.6E-27 T 14-10-2018 IPR035684 Arginyl-tRNA synthetase, catalytic core domain KEGG: 00970+6.1.1.19 GYO_4114 a2315dffefa7e74a8d736aa7e25d5582 556 Hamap MF_00123 Arginine--tRNA ligase [argS]. 5 556 28.967 T 14-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 GYO_4114 a2315dffefa7e74a8d736aa7e25d5582 556 PRINTS PR01038 Arginyl-tRNA synthetase signature 306 327 2.2E-24 T 14-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 GYO_4114 a2315dffefa7e74a8d736aa7e25d5582 556 PRINTS PR01038 Arginyl-tRNA synthetase signature 163 176 2.2E-24 T 14-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 GYO_4114 a2315dffefa7e74a8d736aa7e25d5582 556 PRINTS PR01038 Arginyl-tRNA synthetase signature 124 139 2.2E-24 T 14-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 GYO_4114 a2315dffefa7e74a8d736aa7e25d5582 556 PRINTS PR01038 Arginyl-tRNA synthetase signature 139 155 2.2E-24 T 14-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 GYO_4114 a2315dffefa7e74a8d736aa7e25d5582 556 Pfam PF03485 Arginyl tRNA synthetase N terminal domain 11 94 2.1E-26 T 14-10-2018 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 GYO_4114 a2315dffefa7e74a8d736aa7e25d5582 556 TIGRFAM TIGR00456 argS: arginine--tRNA ligase 7 556 1.2E-192 T 14-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 GYO_4114 a2315dffefa7e74a8d736aa7e25d5582 556 SMART SM00836 437 556 8.4E-57 T 14-10-2018 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 GYO_4114 a2315dffefa7e74a8d736aa7e25d5582 556 SUPERFAMILY SSF47323 432 556 1.63E-37 T 14-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 GYO_4114 a2315dffefa7e74a8d736aa7e25d5582 556 Gene3D G3DSA:1.10.730.10 432 556 2.0E-178 T 14-10-2018 GYO_4114 a2315dffefa7e74a8d736aa7e25d5582 556 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 134 143 - T 14-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 GYO_4114 a2315dffefa7e74a8d736aa7e25d5582 556 SMART SM01016 5 95 6.7E-37 T 14-10-2018 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 GYO_4114 a2315dffefa7e74a8d736aa7e25d5582 556 SUPERFAMILY SSF55190 5 115 9.42E-29 T 14-10-2018 IPR036695 Arginyl tRNA synthetase N-terminal domain superfamily GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19 GYO_4114 a2315dffefa7e74a8d736aa7e25d5582 556 SUPERFAMILY SSF52374 118 448 4.5E-100 T 14-10-2018 GYO_3189 b1952be021a4c4b4d56a00473e6f6b7e 403 SUPERFAMILY SSF69864 171 398 3.14E-95 T 14-10-2018 GYO_3189 b1952be021a4c4b4d56a00473e6f6b7e 403 ProSitePatterns PS00564 Argininosuccinate synthase signature 1. 10 18 - T 14-10-2018 IPR018223 Argininosuccinate synthase, conserved site GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 GYO_3189 b1952be021a4c4b4d56a00473e6f6b7e 403 Gene3D G3DSA:3.90.1260.10 175 402 7.3E-93 T 14-10-2018 IPR024074 Argininosuccinate synthetase, catalytic/multimerisation domain body GO:0004055 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 GYO_3189 b1952be021a4c4b4d56a00473e6f6b7e 403 TIGRFAM TIGR00032 argG: argininosuccinate synthase 6 396 3.6E-187 T 14-10-2018 IPR001518 Argininosuccinate synthase GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 GYO_3189 b1952be021a4c4b4d56a00473e6f6b7e 403 ProSitePatterns PS00565 Argininosuccinate synthase signature 2. 117 128 - T 14-10-2018 IPR018223 Argininosuccinate synthase, conserved site GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 GYO_3189 b1952be021a4c4b4d56a00473e6f6b7e 403 Hamap MF_00005 Argininosuccinate synthase [argG]. 4 397 55.236 T 14-10-2018 IPR023434 Argininosuccinate synthase, type 1 subfamily GO:0004055 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 GYO_3189 b1952be021a4c4b4d56a00473e6f6b7e 403 SUPERFAMILY SSF52402 3 171 1.65E-48 T 14-10-2018 GYO_3189 b1952be021a4c4b4d56a00473e6f6b7e 403 Gene3D G3DSA:3.40.50.620 1 174 1.3E-67 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold GYO_3189 b1952be021a4c4b4d56a00473e6f6b7e 403 Pfam PF00764 Arginosuccinate synthase 8 392 2.0E-188 T 14-10-2018 IPR001518 Argininosuccinate synthase GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 GYO_1727 6216b86f6ede27cb5530ed04021fefdf 342 Gene3D G3DSA:3.40.50.12110 3 115 1.1E-45 T 14-10-2018 GYO_1727 6216b86f6ede27cb5530ed04021fefdf 342 SUPERFAMILY SSF102114 85 310 2.88E-6 T 14-10-2018 GYO_1727 6216b86f6ede27cb5530ed04021fefdf 342 TIGRFAM TIGR04070 photo_TT_lyase: spore photoproduct lyase 5 342 1.5E-155 T 14-10-2018 IPR023897 Spore photoproduct lyase GO:0003913 GYO_1727 6216b86f6ede27cb5530ed04021fefdf 342 Gene3D G3DSA:3.80.30.30 116 342 4.4E-92 T 14-10-2018 GYO_1423 8ecbf79ac097572951dc811d187e80f0 345 Gene3D G3DSA:3.40.50.720 2 331 2.4E-128 T 14-10-2018 GYO_1423 8ecbf79ac097572951dc811d187e80f0 345 ProSitePatterns PS01224 N-acetyl-gamma-glutamyl-phosphate reductase active site. 144 160 - T 14-10-2018 IPR023013 N-acetyl-gamma-glutamyl-phosphate reductase, active site GO:0003942|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 GYO_1423 8ecbf79ac097572951dc811d187e80f0 345 SMART SM00859 2 141 8.0E-50 T 14-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 GYO_1423 8ecbf79ac097572951dc811d187e80f0 345 SUPERFAMILY SSF51735 2 177 8.04E-46 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily GYO_1423 8ecbf79ac097572951dc811d187e80f0 345 Pfam PF02774 Semialdehyde dehydrogenase, dimerisation domain 158 316 2.2E-33 T 14-10-2018 IPR012280 Semialdehyde dehydrogenase, dimerisation domain GO:0005737|GO:0008652|GO:0016620|GO:0046983 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 GYO_1423 8ecbf79ac097572951dc811d187e80f0 345 SUPERFAMILY SSF55347 149 313 2.77E-57 T 14-10-2018 GYO_1423 8ecbf79ac097572951dc811d187e80f0 345 TIGRFAM TIGR01850 argC: N-acetyl-gamma-glutamyl-phosphate reductase 2 345 3.6E-141 T 14-10-2018 IPR000706 N-acetyl-gamma-glutamyl-phosphate reductase, type 1 GO:0003942|GO:0006526|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 GYO_1423 8ecbf79ac097572951dc811d187e80f0 345 Hamap MF_00150 N-acetyl-gamma-glutamyl-phosphate reductase [argC]. 1 339 43.462 T 14-10-2018 IPR000706 N-acetyl-gamma-glutamyl-phosphate reductase, type 1 GO:0003942|GO:0006526|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 GYO_1423 8ecbf79ac097572951dc811d187e80f0 345 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 2 141 5.8E-35 T 14-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 GYO_1423 8ecbf79ac097572951dc811d187e80f0 345 Gene3D G3DSA:3.30.360.10 147 313 2.4E-128 T 14-10-2018 GYO_1423 8ecbf79ac097572951dc811d187e80f0 345 PIRSF PIRSF000148 129 332 8.4E-17 T 14-10-2018 GYO_1423 8ecbf79ac097572951dc811d187e80f0 345 PIRSF PIRSF000148 1 107 5.2E-14 T 14-10-2018 GYO_3992 4f826f70540a67cd3bea364d90ebf96d 285 ProSitePatterns PS01229 Hypothetical cof family signature 2. 235 257 - T 14-10-2018 GYO_3992 4f826f70540a67cd3bea364d90ebf96d 285 Gene3D G3DSA:3.30.1240.10 81 210 3.3E-111 T 14-10-2018 GYO_3992 4f826f70540a67cd3bea364d90ebf96d 285 SUPERFAMILY SSF56784 2 285 1.65E-69 T 14-10-2018 IPR036412 HAD-like superfamily GYO_3992 4f826f70540a67cd3bea364d90ebf96d 285 ProSitePatterns PS01228 Hypothetical cof family signature 1. 3 14 - T 14-10-2018 GYO_3992 4f826f70540a67cd3bea364d90ebf96d 285 Gene3D G3DSA:3.40.50.1000 2 278 3.3E-111 T 14-10-2018 IPR023214 HAD superfamily GYO_3992 4f826f70540a67cd3bea364d90ebf96d 285 Pfam PF08282 haloacid dehalogenase-like hydrolase 4 281 6.1E-67 T 14-10-2018 GYO_3992 4f826f70540a67cd3bea364d90ebf96d 285 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 3 254 2.1E-29 T 14-10-2018 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: R-HSA-446205 GYO_3992 4f826f70540a67cd3bea364d90ebf96d 285 TIGRFAM TIGR00099 Cof-subfamily: Cof-like hydrolase 3 281 9.7E-62 T 14-10-2018 IPR000150 Cof family GO:0016787 GYO_3585 6e88cee493a39b5fd4583781f38f4627 391 Pfam PF00108 Thiolase, N-terminal domain 5 260 1.9E-78 T 14-10-2018 IPR020616 Thiolase, N-terminal GO:0016747 GYO_3585 6e88cee493a39b5fd4583781f38f4627 391 Pfam PF02803 Thiolase, C-terminal domain 269 389 1.4E-48 T 14-10-2018 IPR020617 Thiolase, C-terminal GO:0016747 GYO_3585 6e88cee493a39b5fd4583781f38f4627 391 ProSitePatterns PS00099 Thiolases active site. 372 385 - T 14-10-2018 IPR020610 Thiolase, active site GO:0016747 GYO_3585 6e88cee493a39b5fd4583781f38f4627 391 SUPERFAMILY SSF53901 270 389 6.48E-43 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 GYO_3585 6e88cee493a39b5fd4583781f38f4627 391 PIRSF PIRSF000429 1 391 6.9E-132 T 14-10-2018 IPR002155 Thiolase GO:0016747 GYO_3585 6e88cee493a39b5fd4583781f38f4627 391 Gene3D G3DSA:3.40.47.10 5 274 3.1E-151 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 GYO_3585 6e88cee493a39b5fd4583781f38f4627 391 Gene3D G3DSA:3.40.47.10 128 387 3.1E-151 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 GYO_3585 6e88cee493a39b5fd4583781f38f4627 391 ProSitePatterns PS00737 Thiolases signature 2. 337 353 - T 14-10-2018 IPR020613 Thiolase, conserved site GO:0016747 GYO_3585 6e88cee493a39b5fd4583781f38f4627 391 SUPERFAMILY SSF53901 1 265 5.01E-78 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 GYO_3585 6e88cee493a39b5fd4583781f38f4627 391 ProSitePatterns PS00098 Thiolases acyl-enzyme intermediate signature. 86 104 - T 14-10-2018 IPR020615 Thiolase, acyl-enzyme intermediate active site GO:0016747 GYO_3585 6e88cee493a39b5fd4583781f38f4627 391 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 6 389 7.0E-142 T 14-10-2018 IPR002155 Thiolase GO:0016747 GYO_4034 c1a5290ebb26844c64d87caccaf3a7d5 356 Pfam PF02653 Branched-chain amino acid transport system / permease component 30 320 7.8E-40 T 14-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 GYO_4034 c1a5290ebb26844c64d87caccaf3a7d5 356 TIGRFAM TIGR03408 urea_trans_UrtC: urea ABC transporter, permease protein UrtC 21 330 2.4E-130 T 14-10-2018 IPR017778 ABC transporter, urea, permease protein, UrtC GYO_3171 996307e39a0d1174874dea9efd0b8799 558 PRINTS PR01050 Pyruvate kinase family signature 32 48 1.4E-79 T 14-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 GYO_3171 996307e39a0d1174874dea9efd0b8799 558 PRINTS PR01050 Pyruvate kinase family signature 286 302 1.4E-79 T 14-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 GYO_3171 996307e39a0d1174874dea9efd0b8799 558 PRINTS PR01050 Pyruvate kinase family signature 159 173 1.4E-79 T 14-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 GYO_3171 996307e39a0d1174874dea9efd0b8799 558 PRINTS PR01050 Pyruvate kinase family signature 242 266 1.4E-79 T 14-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 GYO_3171 996307e39a0d1174874dea9efd0b8799 558 PRINTS PR01050 Pyruvate kinase family signature 190 216 1.4E-79 T 14-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 GYO_3171 996307e39a0d1174874dea9efd0b8799 558 PRINTS PR01050 Pyruvate kinase family signature 267 285 1.4E-79 T 14-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 GYO_3171 996307e39a0d1174874dea9efd0b8799 558 PRINTS PR01050 Pyruvate kinase family signature 217 241 1.4E-79 T 14-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 GYO_3171 996307e39a0d1174874dea9efd0b8799 558 SUPERFAMILY SSF50800 43 140 1.92E-27 T 14-10-2018 IPR011037 Pyruvate kinase-like, insert domain superfamily GYO_3171 996307e39a0d1174874dea9efd0b8799 558 Pfam PF02887 Pyruvate kinase, alpha/beta domain 331 442 2.8E-33 T 14-10-2018 IPR015795 Pyruvate kinase, C-terminal KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 GYO_3171 996307e39a0d1174874dea9efd0b8799 558 SUPERFAMILY SSF52935 296 446 1.31E-39 T 14-10-2018 IPR036918 Pyruvate kinase, C-terminal domain superfamily KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 GYO_3171 996307e39a0d1174874dea9efd0b8799 558 ProSitePatterns PS00110 Pyruvate kinase active site signature. 188 200 - T 14-10-2018 IPR018209 Pyruvate kinase, active site GO:0004743|GO:0006096 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 GYO_3171 996307e39a0d1174874dea9efd0b8799 558 Gene3D G3DSA:3.40.1380.20 313 446 5.5E-42 T 14-10-2018 IPR036918 Pyruvate kinase, C-terminal domain superfamily KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 GYO_3171 996307e39a0d1174874dea9efd0b8799 558 TIGRFAM TIGR01064 pyruv_kin: pyruvate kinase 1 445 1.7E-180 T 14-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 GYO_3171 996307e39a0d1174874dea9efd0b8799 558 Pfam PF00224 Pyruvate kinase, barrel domain 1 316 1.3E-143 T 14-10-2018 IPR015793 Pyruvate kinase, barrel GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 GYO_3171 996307e39a0d1174874dea9efd0b8799 558 SUPERFAMILY SSF51621 1 317 9.07E-92 T 14-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 GYO_3171 996307e39a0d1174874dea9efd0b8799 558 Gene3D G3DSA:3.50.30.10 447 558 1.2E-36 T 14-10-2018 GYO_3171 996307e39a0d1174874dea9efd0b8799 558 Pfam PF00391 PEP-utilising enzyme, mobile domain 477 548 9.0E-23 T 14-10-2018 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 GYO_3171 996307e39a0d1174874dea9efd0b8799 558 SUPERFAMILY SSF52009 438 555 1.57E-30 T 14-10-2018 IPR036637 Phosphohistidine domain superfamily GO:0016310|GO:0016772 GYO_3171 996307e39a0d1174874dea9efd0b8799 558 Gene3D G3DSA:3.20.20.60 1 305 7.8E-137 T 14-10-2018 GYO_3171 996307e39a0d1174874dea9efd0b8799 558 Gene3D G3DSA:2.40.33.10 44 140 7.8E-137 T 14-10-2018 IPR015806 Pyruvate kinase, insert domain superfamily GO:0004743|GO:0006096 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 GYO_0693 4b48d5b70a81f72bbaa19eda376373c3 160 Gene3D G3DSA:3.30.565.10 5 152 7.1E-28 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily GYO_0693 4b48d5b70a81f72bbaa19eda376373c3 160 TIGRFAM TIGR01924 rsbW_low_gc: anti-sigma B factor 1 159 5.4E-87 T 14-10-2018 IPR010193 Serine-protein kinase RsbW GO:0004674|GO:0005524|GO:0006468|GO:0016989|GO:0045892 KEGG: 04150+2.7.11.1|KEGG: 04151+2.7.11.1|KEGG: 04714+2.7.11.1|KEGG: 04926+2.7.11.1|KEGG: 05163+2.7.11.1|KEGG: 05165+2.7.11.1|KEGG: 05170+2.7.11.1 GYO_0693 4b48d5b70a81f72bbaa19eda376373c3 160 SUPERFAMILY SSF55874 33 137 1.44E-15 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily GYO_0693 4b48d5b70a81f72bbaa19eda376373c3 160 Hamap MF_00638 Serine-protein kinase RsbW [rsbW]. 2 156 39.568 T 14-10-2018 IPR010193 Serine-protein kinase RsbW GO:0004674|GO:0005524|GO:0006468|GO:0016989|GO:0045892 KEGG: 04150+2.7.11.1|KEGG: 04151+2.7.11.1|KEGG: 04714+2.7.11.1|KEGG: 04926+2.7.11.1|KEGG: 05163+2.7.11.1|KEGG: 05165+2.7.11.1|KEGG: 05170+2.7.11.1 GYO_0693 4b48d5b70a81f72bbaa19eda376373c3 160 Pfam PF13581 Histidine kinase-like ATPase domain 12 141 3.4E-30 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase GYO_1250 6ed05937cd6b6bbeb67668e78ec32c75 461 Pfam PF01595 Domain of unknown function DUF21 9 202 2.5E-49 T 14-10-2018 IPR002550 CNNM, transmembrane domain GYO_1250 6ed05937cd6b6bbeb67668e78ec32c75 461 Pfam PF03471 Transporter associated domain 358 431 3.5E-16 T 14-10-2018 IPR005170 Transporter-associated domain GYO_1250 6ed05937cd6b6bbeb67668e78ec32c75 461 SUPERFAMILY SSF54631 207 352 6.32E-29 T 14-10-2018 GYO_1250 6ed05937cd6b6bbeb67668e78ec32c75 461 Gene3D G3DSA:3.30.465.10 351 430 1.4E-17 T 14-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 GYO_1250 6ed05937cd6b6bbeb67668e78ec32c75 461 SUPERFAMILY SSF56176 355 429 1.09E-14 T 14-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 GYO_1250 6ed05937cd6b6bbeb67668e78ec32c75 461 Gene3D G3DSA:3.10.580.10 197 350 4.3E-47 T 14-10-2018 GYO_1250 6ed05937cd6b6bbeb67668e78ec32c75 461 Pfam PF00571 CBS domain 219 272 2.2E-4 T 14-10-2018 IPR000644 CBS domain GYO_1250 6ed05937cd6b6bbeb67668e78ec32c75 461 Pfam PF00571 CBS domain 292 341 6.6E-4 T 14-10-2018 IPR000644 CBS domain GYO_1250 6ed05937cd6b6bbeb67668e78ec32c75 461 SMART SM01091 357 433 9.5E-20 T 14-10-2018 IPR005170 Transporter-associated domain GYO_1869 3274ede17c3723b32427a1604ca70484 303 Pfam PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain 201 299 2.7E-28 T 14-10-2018 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 GYO_1869 3274ede17c3723b32427a1604ca70484 303 Gene3D G3DSA:3.30.465.10 89 216 4.6E-49 T 14-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 GYO_1869 3274ede17c3723b32427a1604ca70484 303 SUPERFAMILY SSF56176 21 210 2.49E-43 T 14-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 GYO_1869 3274ede17c3723b32427a1604ca70484 303 TIGRFAM TIGR00179 murB: UDP-N-acetylenolpyruvoylglucosamine reductase 22 300 1.2E-118 T 14-10-2018 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 GYO_1869 3274ede17c3723b32427a1604ca70484 303 Pfam PF01565 FAD binding domain 35 164 1.3E-24 T 14-10-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 GYO_1869 3274ede17c3723b32427a1604ca70484 303 Gene3D G3DSA:3.90.78.10 217 303 6.4E-35 T 14-10-2018 IPR036635 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain superfamily GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 GYO_1869 3274ede17c3723b32427a1604ca70484 303 Hamap MF_00037 UDP-N-acetylenolpyruvoylglucosamine reductase [murB]. 1 303 89.823 T 14-10-2018 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 GYO_1869 3274ede17c3723b32427a1604ca70484 303 Gene3D G3DSA:3.30.43.10 1 88 1.2E-30 T 14-10-2018 IPR016167 FAD-binding, type PCMH, subdomain 1 GYO_1869 3274ede17c3723b32427a1604ca70484 303 SUPERFAMILY SSF56194 197 301 5.1E-36 T 14-10-2018 IPR036635 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain superfamily GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 GYO_1392 c48e02a169ec903543812300ec49e2f7 169 Pfam PF05163 DinB family 5 163 3.9E-36 T 14-10-2018 IPR007837 DNA damage-inducible protein DinB GYO_1392 c48e02a169ec903543812300ec49e2f7 169 SUPERFAMILY SSF109854 6 160 2.56E-30 T 14-10-2018 IPR034660 DinB/YfiT-like putative metalloenzymes GYO_1392 c48e02a169ec903543812300ec49e2f7 169 Gene3D G3DSA:1.20.120.450 1 164 9.0E-46 T 14-10-2018 IPR034660 DinB/YfiT-like putative metalloenzymes GYO_2322 f825dc8afe3462508717b7b68637cee9 502 Gene3D G3DSA:1.20.1730.10 1 501 1.2E-120 T 14-10-2018 IPR038377 Sodium/glucose symporter superfamily GYO_2322 f825dc8afe3462508717b7b68637cee9 502 Pfam PF00474 Sodium:solute symporter family 7 405 1.9E-53 T 14-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 GYO_2322 f825dc8afe3462508717b7b68637cee9 502 TIGRFAM TIGR00813 sss: transporter, solute:sodium symporter (SSS) family 7 413 2.3E-86 T 14-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 GYO_0352 e41f80c3136d64d3d4d2309a314c4e26 336 Gene3D G3DSA:1.10.3470.10 2 335 3.4E-96 T 14-10-2018 IPR037294 ABC transporter, BtuC-like GYO_0352 e41f80c3136d64d3d4d2309a314c4e26 336 Pfam PF01032 FecCD transport family 11 329 2.8E-87 T 14-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 GYO_0352 e41f80c3136d64d3d4d2309a314c4e26 336 SUPERFAMILY SSF81345 4 329 2.88E-79 T 14-10-2018 IPR037294 ABC transporter, BtuC-like GYO_3096 f0a8238a34a094ddcedcf0d10e94611e 590 SUPERFAMILY SSF46600 182 235 8.63E-16 T 14-10-2018 IPR036876 UVR domain superfamily GYO_3096 f0a8238a34a094ddcedcf0d10e94611e 590 Hamap MF_00203 UvrABC system protein C [uvrC]. 2 587 29.089 T 14-10-2018 IPR004791 UvrABC system, subunit C GO:0006289|GO:0009380|GO:0009381 GYO_3096 f0a8238a34a094ddcedcf0d10e94611e 590 Pfam PF01541 GIY-YIG catalytic domain 16 90 1.3E-9 T 14-10-2018 IPR000305 GIY-YIG endonuclease GYO_3096 f0a8238a34a094ddcedcf0d10e94611e 590 Gene3D G3DSA:4.10.860.10 196 232 2.5E-6 T 14-10-2018 GYO_3096 f0a8238a34a094ddcedcf0d10e94611e 590 Pfam PF08459 UvrC Helix-hairpin-helix N-terminal 372 523 6.5E-57 T 14-10-2018 IPR001162 UvrC family homology region GYO_3096 f0a8238a34a094ddcedcf0d10e94611e 590 SMART SM00465 15 95 3.8E-24 T 14-10-2018 IPR000305 GIY-YIG endonuclease GYO_3096 f0a8238a34a094ddcedcf0d10e94611e 590 Gene3D G3DSA:3.30.420.340 365 523 3.3E-63 T 14-10-2018 IPR038476 UvrC homology region 2 superfamily GYO_3096 f0a8238a34a094ddcedcf0d10e94611e 590 Gene3D G3DSA:1.10.150.20 527 588 1.4E-21 T 14-10-2018 GYO_3096 f0a8238a34a094ddcedcf0d10e94611e 590 SUPERFAMILY SSF47781 502 589 9.53E-21 T 14-10-2018 IPR010994 RuvA domain 2-like GYO_3096 f0a8238a34a094ddcedcf0d10e94611e 590 Pfam PF02151 UvrB/uvrC motif 197 229 2.1E-11 T 14-10-2018 IPR001943 UVR domain GO:0005515 GYO_3096 f0a8238a34a094ddcedcf0d10e94611e 590 Gene3D G3DSA:3.40.1440.10 1 99 1.0E-38 T 14-10-2018 IPR035901 GIY-YIG endonuclease superfamily Reactome: R-HSA-5693568|Reactome: R-HSA-6783310 GYO_3096 f0a8238a34a094ddcedcf0d10e94611e 590 SUPERFAMILY SSF82771 14 97 6.02E-21 T 14-10-2018 IPR035901 GIY-YIG endonuclease superfamily Reactome: R-HSA-5693568|Reactome: R-HSA-6783310 GYO_3096 f0a8238a34a094ddcedcf0d10e94611e 590 TIGRFAM TIGR00194 uvrC: excinuclease ABC subunit C 5 570 1.2E-234 T 14-10-2018 IPR004791 UvrABC system, subunit C GO:0006289|GO:0009380|GO:0009381 GYO_3967 f1c6373df3b6a7d5b4e6b9ab585d7b3c 158 SMART SM00344 12 118 7.3E-44 T 14-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 GYO_3967 f1c6373df3b6a7d5b4e6b9ab585d7b3c 158 Gene3D G3DSA:3.30.70.920 66 158 1.0E-14 T 14-10-2018 GYO_3967 f1c6373df3b6a7d5b4e6b9ab585d7b3c 158 Gene3D G3DSA:1.10.10.10 2 65 4.7E-19 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily GYO_3967 f1c6373df3b6a7d5b4e6b9ab585d7b3c 158 Pfam PF01037 Lrp/AsnC ligand binding domain 79 148 9.6E-11 T 14-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain GYO_3967 f1c6373df3b6a7d5b4e6b9ab585d7b3c 158 SUPERFAMILY SSF54909 73 151 1.47E-12 T 14-10-2018 IPR011008 Dimeric alpha-beta barrel GYO_3967 f1c6373df3b6a7d5b4e6b9ab585d7b3c 158 Pfam PF13404 AsnC-type helix-turn-helix domain 12 52 1.0E-14 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 GYO_3967 f1c6373df3b6a7d5b4e6b9ab585d7b3c 158 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 12 28 6.4E-13 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 GYO_3967 f1c6373df3b6a7d5b4e6b9ab585d7b3c 158 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 39 58 6.4E-13 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 GYO_3967 f1c6373df3b6a7d5b4e6b9ab585d7b3c 158 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 28 39 6.4E-13 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 GYO_3967 f1c6373df3b6a7d5b4e6b9ab585d7b3c 158 SUPERFAMILY SSF46785 11 71 1.29E-15 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily GYO_0617 63a41231cb50ba79aa8c85bcfe3d2b7b 373 Gene3D G3DSA:3.40.50.720 2 202 6.5E-73 T 14-10-2018 GYO_0617 63a41231cb50ba79aa8c85bcfe3d2b7b 373 Hamap MF_00196 Mannitol-1-phosphate 5-dehydrogenase [mtlD]. 1 371 41.355 T 14-10-2018 IPR023028 Mannitol-1-phosphate 5-dehydrogenase GO:0008926|GO:0019594|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 GYO_0617 63a41231cb50ba79aa8c85bcfe3d2b7b 373 Pfam PF01232 Mannitol dehydrogenase Rossmann domain 2 122 1.3E-25 T 14-10-2018 IPR013131 Mannitol dehydrogenase, N-terminal GO:0016491|GO:0055114 GYO_0617 63a41231cb50ba79aa8c85bcfe3d2b7b 373 Gene3D G3DSA:1.10.1040.10 204 373 1.5E-57 T 14-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 GYO_0617 63a41231cb50ba79aa8c85bcfe3d2b7b 373 SUPERFAMILY SSF51735 3 199 2.07E-43 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily GYO_0617 63a41231cb50ba79aa8c85bcfe3d2b7b 373 PRINTS PR00084 Mannitol dehydrogenase signature 3 13 3.4E-20 T 14-10-2018 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 GYO_0617 63a41231cb50ba79aa8c85bcfe3d2b7b 373 PRINTS PR00084 Mannitol dehydrogenase signature 149 162 3.4E-20 T 14-10-2018 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 GYO_0617 63a41231cb50ba79aa8c85bcfe3d2b7b 373 PRINTS PR00084 Mannitol dehydrogenase signature 113 126 3.4E-20 T 14-10-2018 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 GYO_0617 63a41231cb50ba79aa8c85bcfe3d2b7b 373 PRINTS PR00084 Mannitol dehydrogenase signature 167 182 3.4E-20 T 14-10-2018 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 GYO_0617 63a41231cb50ba79aa8c85bcfe3d2b7b 373 Pfam PF08125 Mannitol dehydrogenase C-terminal domain 148 358 7.3E-55 T 14-10-2018 IPR013118 Mannitol dehydrogenase, C-terminal GO:0016491|GO:0050662|GO:0055114 GYO_0617 63a41231cb50ba79aa8c85bcfe3d2b7b 373 SUPERFAMILY SSF48179 201 365 2.79E-42 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 GYO_0617 63a41231cb50ba79aa8c85bcfe3d2b7b 373 ProSitePatterns PS00974 Mannitol dehydrogenases signature. 149 161 - T 14-10-2018 IPR023027 Mannitol dehydrogenase, conserved site GO:0019594|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 GYO_0906 c32f32595a564ec674bd26171d529ffc 84 SUPERFAMILY SSF82697 1 80 7.5E-30 T 14-10-2018 IPR036604 Phosphoribosylformylglycinamidine synthase subunit PurS-like superfamily KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 GYO_0906 c32f32595a564ec674bd26171d529ffc 84 Pfam PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase 3 78 6.1E-33 T 14-10-2018 IPR003850 Phosphoribosylformylglycinamidine synthase subunit PurS KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277 GYO_0906 c32f32595a564ec674bd26171d529ffc 84 ProDom PD010362 PHOSPHORIBOSYLFORMYLGLYCINAMIDINE PURS SYNTHETASE SYNTHASE COMPONENT SYNTHASE LIGASE FGAM UPF0062 I 9 80 2.0E-35 T 14-10-2018 IPR003850 Phosphoribosylformylglycinamidine synthase subunit PurS KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277 GYO_0906 c32f32595a564ec674bd26171d529ffc 84 TIGRFAM TIGR00302 TIGR00302: phosphoribosylformylglycinamidine synthase, purS protein 2 80 1.8E-38 T 14-10-2018 IPR003850 Phosphoribosylformylglycinamidine synthase subunit PurS KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277 GYO_0906 c32f32595a564ec674bd26171d529ffc 84 Gene3D G3DSA:3.30.1280.10 1 84 9.9E-39 T 14-10-2018 IPR036604 Phosphoribosylformylglycinamidine synthase subunit PurS-like superfamily KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 GYO_0906 c32f32595a564ec674bd26171d529ffc 84 Hamap MF_01926 Phosphoribosylformylglycinamidine synthase subunit PurS [purS]. 2 78 21.888 T 14-10-2018 IPR003850 Phosphoribosylformylglycinamidine synthase subunit PurS KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277 GYO_1321 e37790626a363d5fc3019d537a4de0af 46 Pfam PF14149 YhfH-like protein 5 40 1.7E-20 T 14-10-2018 IPR025432 YhfH-like protein GYO_2448 27c8d3a2ddf48df6d22117cdf7d6b2b3 749 SMART SM00487 51 255 1.3E-30 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain GYO_2448 27c8d3a2ddf48df6d22117cdf7d6b2b3 749 Gene3D G3DSA:3.40.50.300 24 244 4.1E-47 T 14-10-2018 GYO_2448 27c8d3a2ddf48df6d22117cdf7d6b2b3 749 Gene3D G3DSA:3.40.50.300 264 425 7.5E-21 T 14-10-2018 GYO_2448 27c8d3a2ddf48df6d22117cdf7d6b2b3 749 SMART SM00490 302 389 5.8E-15 T 14-10-2018 IPR001650 Helicase, C-terminal GYO_2448 27c8d3a2ddf48df6d22117cdf7d6b2b3 749 Pfam PF00271 Helicase conserved C-terminal domain 283 388 8.1E-14 T 14-10-2018 IPR001650 Helicase, C-terminal GYO_2448 27c8d3a2ddf48df6d22117cdf7d6b2b3 749 SUPERFAMILY SSF52540 101 408 5.08E-44 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase GYO_2448 27c8d3a2ddf48df6d22117cdf7d6b2b3 749 Pfam PF09369 Domain of unknown function (DUF1998) 650 728 1.2E-18 T 14-10-2018 IPR018973 DEAD/DEAH-box helicase, putative GYO_2448 27c8d3a2ddf48df6d22117cdf7d6b2b3 749 Pfam PF00270 DEAD/DEAH box helicase 58 229 1.5E-27 T 14-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 GYO_3903 ca74b3b42293617352e8bef555202eb6 219 SUPERFAMILY SSF52540 6 212 2.17E-47 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase GYO_3903 ca74b3b42293617352e8bef555202eb6 219 SMART SM00382 31 210 3.4E-15 T 14-10-2018 IPR003593 AAA+ ATPase domain GYO_3903 ca74b3b42293617352e8bef555202eb6 219 Pfam PF00005 ABC transporter 23 162 2.3E-29 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 GYO_3903 ca74b3b42293617352e8bef555202eb6 219 Gene3D G3DSA:3.40.50.300 1 217 2.5E-49 T 14-10-2018 GYO_3903 ca74b3b42293617352e8bef555202eb6 219 ProSitePatterns PS00211 ABC transporters family signature. 134 148 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 GYO_1917 5a777eb241cfbde87f327f991b738e3a 204 Gene3D G3DSA:3.30.63.10 37 96 1.6E-68 T 14-10-2018 GYO_1917 5a777eb241cfbde87f327f991b738e3a 204 TIGRFAM TIGR03263 guanyl_kin: guanylate kinase 5 184 6.6E-74 T 14-10-2018 IPR017665 Guanylate kinase GO:0004385|GO:0006163 KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221|Reactome: R-HSA-2161541|Reactome: R-HSA-499943 GYO_1917 5a777eb241cfbde87f327f991b738e3a 204 Hamap MF_00328 Guanylate kinase [gmk]. 3 187 36.86 T 14-10-2018 IPR017665 Guanylate kinase GO:0004385|GO:0006163 KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221|Reactome: R-HSA-2161541|Reactome: R-HSA-499943 GYO_1917 5a777eb241cfbde87f327f991b738e3a 204 Pfam PF00625 Guanylate kinase 7 184 5.7E-54 T 14-10-2018 IPR008145 Guanylate kinase/L-type calcium channel beta subunit GYO_1917 5a777eb241cfbde87f327f991b738e3a 204 ProSitePatterns PS00856 Guanylate kinase-like signature. 40 57 - T 14-10-2018 IPR020590 Guanylate kinase, conserved site KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221 GYO_1917 5a777eb241cfbde87f327f991b738e3a 204 SMART SM00072 4 187 3.4E-84 T 14-10-2018 IPR008145 Guanylate kinase/L-type calcium channel beta subunit GYO_1917 5a777eb241cfbde87f327f991b738e3a 204 Gene3D G3DSA:3.40.50.300 9 183 1.6E-68 T 14-10-2018 GYO_1917 5a777eb241cfbde87f327f991b738e3a 204 SUPERFAMILY SSF52540 3 192 3.03E-71 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase GYO_4264 f84aebd06b0e94ced7df68eb6120fe21 547 ProSitePatterns PS00438 Catalase proximal active site signature. 72 88 - T 14-10-2018 IPR024708 Catalase active site GO:0004096 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 GYO_4264 f84aebd06b0e94ced7df68eb6120fe21 547 Gene3D G3DSA:2.40.180.10 32 534 5.6E-223 T 14-10-2018 IPR037060 Catalase core domain superfamily GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 GYO_4264 f84aebd06b0e94ced7df68eb6120fe21 547 Pfam PF00199 Catalase 36 425 2.2E-172 T 14-10-2018 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 GYO_4264 f84aebd06b0e94ced7df68eb6120fe21 547 PIRSF PIRSF038928 24 519 6.7E-180 T 14-10-2018 IPR024711 Catalase, mono-functional, haem-containing, clades 1 and 3 GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 GYO_4264 f84aebd06b0e94ced7df68eb6120fe21 547 ProSitePatterns PS00437 Catalase proximal heme-ligand signature. 367 375 - T 14-10-2018 IPR002226 Catalase haem-binding site GO:0020037 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 GYO_4264 f84aebd06b0e94ced7df68eb6120fe21 547 SUPERFAMILY SSF56634 28 514 4.97E-196 T 14-10-2018 IPR020835 Catalase superfamily GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 GYO_4264 f84aebd06b0e94ced7df68eb6120fe21 547 SMART SM01060 36 429 2.9E-252 T 14-10-2018 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 GYO_4264 f84aebd06b0e94ced7df68eb6120fe21 547 PRINTS PR00067 Catalase signature 49 72 1.6E-64 T 14-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 GYO_4264 f84aebd06b0e94ced7df68eb6120fe21 547 PRINTS PR00067 Catalase signature 138 155 1.6E-64 T 14-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 GYO_4264 f84aebd06b0e94ced7df68eb6120fe21 547 PRINTS PR00067 Catalase signature 322 349 1.6E-64 T 14-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 GYO_4264 f84aebd06b0e94ced7df68eb6120fe21 547 PRINTS PR00067 Catalase signature 157 175 1.6E-64 T 14-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 GYO_4264 f84aebd06b0e94ced7df68eb6120fe21 547 PRINTS PR00067 Catalase signature 117 135 1.6E-64 T 14-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 GYO_4264 f84aebd06b0e94ced7df68eb6120fe21 547 PRINTS PR00067 Catalase signature 354 380 1.6E-64 T 14-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 GYO_4264 f84aebd06b0e94ced7df68eb6120fe21 547 Pfam PF06628 Catalase-related immune-responsive 451 513 1.2E-20 T 14-10-2018 IPR010582 Catalase immune-responsive domain KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 GYO_3769 2397e019b5f629c3c03be21129110976 626 Pfam PF02719 Polysaccharide biosynthesis protein 299 580 2.5E-121 T 14-10-2018 IPR003869 Polysaccharide biosynthesis protein, CapD-like domain GYO_3769 2397e019b5f629c3c03be21129110976 626 SUPERFAMILY SSF51735 296 560 1.81E-55 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily GYO_3769 2397e019b5f629c3c03be21129110976 626 Gene3D G3DSA:3.40.50.720 155 280 9.6E-30 T 14-10-2018 GYO_3769 2397e019b5f629c3c03be21129110976 626 Gene3D G3DSA:3.90.25.30 462 561 7.3E-115 T 14-10-2018 GYO_3769 2397e019b5f629c3c03be21129110976 626 Gene3D G3DSA:3.40.50.720 297 573 7.3E-115 T 14-10-2018 GYO_3769 2397e019b5f629c3c03be21129110976 626 SUPERFAMILY SSF51735 158 286 4.33E-12 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily GYO_3769 2397e019b5f629c3c03be21129110976 626 Pfam PF13727 CoA-binding domain 92 254 8.6E-17 T 14-10-2018 GYO_0508 3ab0ac14c55662929b53d55d87258068 659 SUPERFAMILY SSF51011 392 465 3.51E-17 T 14-10-2018 GYO_0508 3ab0ac14c55662929b53d55d87258068 659 Pfam PF16738 Starch-binding module 26 566 637 8.1E-19 T 14-10-2018 IPR031965 Starch-binding module 26 KEGG: 00500+3.2.1.1 GYO_0508 3ab0ac14c55662929b53d55d87258068 659 Gene3D G3DSA:3.20.20.80 45 388 2.5E-153 T 14-10-2018 GYO_0508 3ab0ac14c55662929b53d55d87258068 659 SMART SM00642 50 383 6.0E-18 T 14-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 GYO_0508 3ab0ac14c55662929b53d55d87258068 659 Gene3D G3DSA:2.60.40.10 560 658 3.3E-20 T 14-10-2018 IPR013783 Immunoglobulin-like fold GYO_0508 3ab0ac14c55662929b53d55d87258068 659 PRINTS PR00110 Alpha-amylase signature 99 116 1.5E-10 T 14-10-2018 IPR006046 Alpha amylase GO:0003824|GO:0005975|GO:0043169 KEGG: 00500+3.2.1.1|Reactome: R-HSA-189085 GYO_0508 3ab0ac14c55662929b53d55d87258068 659 PRINTS PR00110 Alpha-amylase signature 132 143 1.5E-10 T 14-10-2018 IPR006046 Alpha amylase GO:0003824|GO:0005975|GO:0043169 KEGG: 00500+3.2.1.1|Reactome: R-HSA-189085 GYO_0508 3ab0ac14c55662929b53d55d87258068 659 PRINTS PR00110 Alpha-amylase signature 211 222 1.5E-10 T 14-10-2018 IPR006046 Alpha amylase GO:0003824|GO:0005975|GO:0043169 KEGG: 00500+3.2.1.1|Reactome: R-HSA-189085 GYO_0508 3ab0ac14c55662929b53d55d87258068 659 PRINTS PR00110 Alpha-amylase signature 300 312 1.5E-10 T 14-10-2018 IPR006046 Alpha amylase GO:0003824|GO:0005975|GO:0043169 KEGG: 00500+3.2.1.1|Reactome: R-HSA-189085 GYO_0508 3ab0ac14c55662929b53d55d87258068 659 SUPERFAMILY SSF51445 47 354 3.05E-59 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily GYO_0508 3ab0ac14c55662929b53d55d87258068 659 SMART SM00632 393 468 2.9E-13 T 14-10-2018 IPR031319 Alpha-amylase, C-terminal domain Reactome: R-HSA-189085 GYO_0508 3ab0ac14c55662929b53d55d87258068 659 Gene3D G3DSA:2.60.40.1180 389 466 9.0E-25 T 14-10-2018 IPR013780 Glycosyl hydrolase, all-beta GYO_0508 3ab0ac14c55662929b53d55d87258068 659 Pfam PF00128 Alpha amylase, catalytic domain 70 322 6.1E-17 T 14-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 GYO_4273 09c26b732b255df2fae45d5686dbbbb0 276 ProSitePatterns PS01050 YjeF C-terminal domain signature 2. 212 222 - T 14-10-2018 IPR017953 Carbohydrate kinase, predicted, conserved site GYO_4273 09c26b732b255df2fae45d5686dbbbb0 276 Gene3D G3DSA:3.40.1190.20 1 276 4.8E-90 T 14-10-2018 IPR029056 Ribokinase-like GYO_4273 09c26b732b255df2fae45d5686dbbbb0 276 ProSitePatterns PS01049 YjeF C-terminal domain signature 1. 98 108 - T 14-10-2018 IPR017953 Carbohydrate kinase, predicted, conserved site GYO_4273 09c26b732b255df2fae45d5686dbbbb0 276 Hamap MF_01965 ADP-dependent (S)-NAD(P)H-hydrate dehydratase [nnrD]. 7 273 21.098 T 14-10-2018 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 Reactome: R-HSA-197264 GYO_4273 09c26b732b255df2fae45d5686dbbbb0 276 Pfam PF01256 Carbohydrate kinase 31 270 1.8E-77 T 14-10-2018 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 Reactome: R-HSA-197264 GYO_4273 09c26b732b255df2fae45d5686dbbbb0 276 SUPERFAMILY SSF53613 5 274 1.34E-73 T 14-10-2018 IPR029056 Ribokinase-like GYO_4273 09c26b732b255df2fae45d5686dbbbb0 276 TIGRFAM TIGR00196 yjeF_cterm: YjeF family C-terminal domain 5 274 5.0E-97 T 14-10-2018 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 Reactome: R-HSA-197264 GYO_2561 602548fcb91c579a569e1fce50292966 361 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 49 87 - T 14-10-2018 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 GYO_2561 602548fcb91c579a569e1fce50292966 361 Gene3D G3DSA:3.40.140.10 1 134 3.6E-48 T 14-10-2018 GYO_2561 602548fcb91c579a569e1fce50292966 361 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 2 98 1.1E-21 T 14-10-2018 IPR002125 Cytidine and deoxycytidylate deaminase domain GYO_2561 602548fcb91c579a569e1fce50292966 361 Gene3D G3DSA:3.40.430.10 135 361 2.5E-80 T 14-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 GYO_2561 602548fcb91c579a569e1fce50292966 361 PIRSF PIRSF006769 1 360 4.8E-131 T 14-10-2018 IPR004794 Riboflavin biosynthesis protein RibD GO:0008835|GO:0009231|GO:0055114 KEGG: 00740+3.5.4.26+1.1.1.193|MetaCyc: PWY-7991 GYO_2561 602548fcb91c579a569e1fce50292966 361 TIGRFAM TIGR00326 eubact_ribD: riboflavin biosynthesis protein RibD 6 355 1.0E-153 T 14-10-2018 IPR004794 Riboflavin biosynthesis protein RibD GO:0008835|GO:0009231|GO:0055114 KEGG: 00740+3.5.4.26+1.1.1.193|MetaCyc: PWY-7991 GYO_2561 602548fcb91c579a569e1fce50292966 361 TIGRFAM TIGR00227 ribD_Cterm: riboflavin-specific deaminase C-terminal domain 145 357 2.9E-86 T 14-10-2018 IPR011549 Riboflavin-specific deaminase, C-terminal GO:0008703|GO:0009231|GO:0050661|GO:0055114 GYO_2561 602548fcb91c579a569e1fce50292966 361 Pfam PF01872 RibD C-terminal domain 146 354 4.5E-65 T 14-10-2018 IPR002734 Bacterial bifunctional deaminase-reductase, C-terminal GO:0008703|GO:0009231|GO:0055114 GYO_2561 602548fcb91c579a569e1fce50292966 361 SUPERFAMILY SSF53597 143 355 6.6E-62 T 14-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 GYO_2561 602548fcb91c579a569e1fce50292966 361 SUPERFAMILY SSF53927 1 144 1.64E-47 T 14-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 GYO_4067 53b25daeef17a32b44e0202dc1f6b724 149 TIGRFAM TIGR00689 rpiB_lacA_lacB: sugar-phosphate isomerase, RpiB/LacA/LacB family 3 147 2.1E-65 T 14-10-2018 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26 GYO_4067 53b25daeef17a32b44e0202dc1f6b724 149 SUPERFAMILY SSF89623 1 148 5.23E-58 T 14-10-2018 IPR036569 Sugar-phosphate isomerase, RpiB/LacA/LacB superfamily GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26 GYO_4067 53b25daeef17a32b44e0202dc1f6b724 149 Pfam PF02502 Ribose/Galactose Isomerase 3 141 2.9E-56 T 14-10-2018 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26 GYO_4067 53b25daeef17a32b44e0202dc1f6b724 149 PIRSF PIRSF005384 1 148 1.3E-58 T 14-10-2018 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26 GYO_4067 53b25daeef17a32b44e0202dc1f6b724 149 TIGRFAM TIGR01120 rpiB: ribose 5-phosphate isomerase B 2 144 9.5E-52 T 14-10-2018 IPR004785 Ribose 5-phosphate isomerase B GO:0004751|GO:0006098 GYO_4067 53b25daeef17a32b44e0202dc1f6b724 149 Gene3D G3DSA:3.40.1400.10 1 148 1.1E-59 T 14-10-2018 IPR036569 Sugar-phosphate isomerase, RpiB/LacA/LacB superfamily GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26 GYO_0777 80702a60f238a17cc2eedca7391e6baa 213 SUPERFAMILY SSF46894 136 209 6.46E-19 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 GYO_0777 80702a60f238a17cc2eedca7391e6baa 213 SUPERFAMILY SSF52172 1 131 8.68E-36 T 14-10-2018 IPR011006 CheY-like superfamily GYO_0777 80702a60f238a17cc2eedca7391e6baa 213 SMART SM00421 146 203 1.3E-20 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 GYO_0777 80702a60f238a17cc2eedca7391e6baa 213 Pfam PF00196 Bacterial regulatory proteins, luxR family 148 203 4.2E-17 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 GYO_0777 80702a60f238a17cc2eedca7391e6baa 213 Gene3D G3DSA:3.40.50.12740 3 209 1.2E-64 T 14-10-2018 GYO_0777 80702a60f238a17cc2eedca7391e6baa 213 Pfam PF00072 Response regulator receiver domain 4 112 7.9E-30 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 GYO_0777 80702a60f238a17cc2eedca7391e6baa 213 ProSitePatterns PS00622 LuxR-type HTH domain signature. 163 190 - T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 GYO_0777 80702a60f238a17cc2eedca7391e6baa 213 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 149 163 1.6E-9 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 GYO_0777 80702a60f238a17cc2eedca7391e6baa 213 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 163 179 1.6E-9 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 GYO_0777 80702a60f238a17cc2eedca7391e6baa 213 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 179 191 1.6E-9 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 GYO_0777 80702a60f238a17cc2eedca7391e6baa 213 SMART SM00448 2 114 8.0E-38 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 GYO_2432 93b5515a613861e0ed08a8a2751a017e 194 Pfam PF00156 Phosphoribosyl transferase domain 48 157 5.0E-8 T 14-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 GYO_2432 93b5515a613861e0ed08a8a2751a017e 194 Gene3D G3DSA:3.40.50.2020 3 188 4.4E-55 T 14-10-2018 GYO_2432 93b5515a613861e0ed08a8a2751a017e 194 Hamap MF_01184 Xanthine phosphoribosyltransferase [xpt]. 1 189 42.045 T 14-10-2018 IPR010079 Xanthine phosphoribosyltransferase GO:0016763|GO:0043101|GO:0046110 KEGG: 00230+2.4.2.22 GYO_2432 93b5515a613861e0ed08a8a2751a017e 194 SUPERFAMILY SSF53271 1 188 1.4E-46 T 14-10-2018 IPR029057 Phosphoribosyltransferase-like GYO_2432 93b5515a613861e0ed08a8a2751a017e 194 TIGRFAM TIGR01744 XPRTase: xanthine phosphoribosyltransferase 1 191 4.2E-99 T 14-10-2018 IPR010079 Xanthine phosphoribosyltransferase GO:0016763|GO:0043101|GO:0046110 KEGG: 00230+2.4.2.22 GYO_2495 4e98e2c2ee8668fb63ad87fbf2efeb5c 515 Gene3D G3DSA:3.60.120.10 2 502 8.2E-164 T 14-10-2018 IPR005801 ADC synthase GO:0009058 GYO_2495 4e98e2c2ee8668fb63ad87fbf2efeb5c 515 Pfam PF00425 chorismate binding enzyme 231 484 4.0E-95 T 14-10-2018 IPR015890 Chorismate-utilising enzyme, C-terminal GYO_2495 4e98e2c2ee8668fb63ad87fbf2efeb5c 515 TIGRFAM TIGR00564 trpE_most: anthranilate synthase component I 29 493 9.6E-189 T 14-10-2018 IPR005256 Anthranilate synthase component I, PabB-like GO:0000162|GO:0004049 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 GYO_2495 4e98e2c2ee8668fb63ad87fbf2efeb5c 515 Pfam PF04715 Anthranilate synthase component I, N terminal region 29 167 1.4E-27 T 14-10-2018 IPR006805 Anthranilate synthase component I, N-terminal GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 GYO_2495 4e98e2c2ee8668fb63ad87fbf2efeb5c 515 PRINTS PR00095 Anthranilate synthase component I signature 441 455 1.6E-20 T 14-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 GYO_2495 4e98e2c2ee8668fb63ad87fbf2efeb5c 515 PRINTS PR00095 Anthranilate synthase component I signature 426 440 1.6E-20 T 14-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 GYO_2495 4e98e2c2ee8668fb63ad87fbf2efeb5c 515 PRINTS PR00095 Anthranilate synthase component I signature 346 359 1.6E-20 T 14-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 GYO_2495 4e98e2c2ee8668fb63ad87fbf2efeb5c 515 PRINTS PR00095 Anthranilate synthase component I signature 332 345 1.6E-20 T 14-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 GYO_2495 4e98e2c2ee8668fb63ad87fbf2efeb5c 515 SUPERFAMILY SSF56322 18 497 1.83E-148 T 14-10-2018 IPR005801 ADC synthase GO:0009058 GYO_4343 89e38b9cac17cee292eff5b368e1a9d3 552 PIRSF PIRSF001423 1 552 1.4E-297 T 14-10-2018 IPR023637 Urocanase GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 GYO_4343 89e38b9cac17cee292eff5b368e1a9d3 552 Gene3D G3DSA:3.40.1770.10 16 538 4.5E-257 T 14-10-2018 GYO_4343 89e38b9cac17cee292eff5b368e1a9d3 552 Pfam PF01175 Urocanase Rossmann-like domain 137 345 2.3E-89 T 14-10-2018 IPR035085 Urocanase, Rossmann-like domain KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 GYO_4343 89e38b9cac17cee292eff5b368e1a9d3 552 Gene3D G3DSA:3.40.50.10730 138 345 4.5E-257 T 14-10-2018 IPR038364 Urocanase, central domain superfamily KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 GYO_4343 89e38b9cac17cee292eff5b368e1a9d3 552 SUPERFAMILY SSF111326 6 551 2.62E-257 T 14-10-2018 IPR036190 Urocanase superfamily KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 GYO_4343 89e38b9cac17cee292eff5b368e1a9d3 552 TIGRFAM TIGR01228 hutU: urocanate hydratase 6 550 0.0 T 14-10-2018 IPR023637 Urocanase GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 GYO_4343 89e38b9cac17cee292eff5b368e1a9d3 552 ProSitePatterns PS01233 Urocanase signature. 438 453 - T 14-10-2018 IPR023636 Urocanase conserved site GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 GYO_4343 89e38b9cac17cee292eff5b368e1a9d3 552 Pfam PF17392 Urocanase C-terminal domain 348 542 4.5E-95 T 14-10-2018 IPR035401 Urocanase, C-terminal domain KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 GYO_4343 89e38b9cac17cee292eff5b368e1a9d3 552 Hamap MF_00577 Urocanate hydratase [hutU]. 2 552 51.414 T 14-10-2018 IPR023637 Urocanase GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 GYO_4343 89e38b9cac17cee292eff5b368e1a9d3 552 Pfam PF17391 Urocanase N-terminal domain 8 134 3.8E-61 T 14-10-2018 IPR035400 Urocanase, N-terminal domain KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 GYO_2826 6c684b49d0f252753d51ba1d3d4930a7 44 Pfam PF14141 YqzM-like protein 2 43 2.8E-24 T 14-10-2018 IPR025416 YqzM-like protein GYO_3423 9afad10c00b8bbaeedb698a53d0e8d05 450 Gene3D G3DSA:3.40.50.10490 227 417 5.8E-150 T 14-10-2018 GYO_3423 9afad10c00b8bbaeedb698a53d0e8d05 450 ProSitePatterns PS00174 Phosphoglucose isomerase signature 2. 408 425 - T 14-10-2018 IPR018189 Phosphoglucose isomerase, conserved site GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 GYO_3423 9afad10c00b8bbaeedb698a53d0e8d05 450 Gene3D G3DSA:3.40.50.10490 1 58 5.6E-20 T 14-10-2018 GYO_3423 9afad10c00b8bbaeedb698a53d0e8d05 450 ProSitePatterns PS00765 Phosphoglucose isomerase signature 1. 202 215 - T 14-10-2018 IPR018189 Phosphoglucose isomerase, conserved site GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 GYO_3423 9afad10c00b8bbaeedb698a53d0e8d05 450 PRINTS PR00662 Glucose-6-phosphate isomerase signature 198 216 6.6E-31 T 14-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 GYO_3423 9afad10c00b8bbaeedb698a53d0e8d05 450 PRINTS PR00662 Glucose-6-phosphate isomerase signature 394 408 6.6E-31 T 14-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 GYO_3423 9afad10c00b8bbaeedb698a53d0e8d05 450 PRINTS PR00662 Glucose-6-phosphate isomerase signature 408 421 6.6E-31 T 14-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 GYO_3423 9afad10c00b8bbaeedb698a53d0e8d05 450 PRINTS PR00662 Glucose-6-phosphate isomerase signature 273 294 6.6E-31 T 14-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 GYO_3423 9afad10c00b8bbaeedb698a53d0e8d05 450 PRINTS PR00662 Glucose-6-phosphate isomerase signature 376 394 6.6E-31 T 14-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 GYO_3423 9afad10c00b8bbaeedb698a53d0e8d05 450 PRINTS PR00662 Glucose-6-phosphate isomerase signature 76 95 6.6E-31 T 14-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 GYO_3423 9afad10c00b8bbaeedb698a53d0e8d05 450 Gene3D G3DSA:3.40.50.10490 59 226 5.8E-150 T 14-10-2018 GYO_3423 9afad10c00b8bbaeedb698a53d0e8d05 450 Hamap MF_00473 Glucose-6-phosphate isomerase [pgi]. 1 435 26.901 T 14-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 GYO_3423 9afad10c00b8bbaeedb698a53d0e8d05 450 SUPERFAMILY SSF53697 5 447 1.31E-142 T 14-10-2018 GYO_3423 9afad10c00b8bbaeedb698a53d0e8d05 450 Pfam PF00342 Phosphoglucose isomerase 355 426 7.9E-6 T 14-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 GYO_3423 9afad10c00b8bbaeedb698a53d0e8d05 450 Pfam PF00342 Phosphoglucose isomerase 76 296 3.3E-19 T 14-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 GYO_2996 a473723467ec586b2cd24abc7f6f4a86 424 Pfam PF13393 Histidyl-tRNA synthetase 8 313 1.3E-48 T 14-10-2018 GYO_2996 a473723467ec586b2cd24abc7f6f4a86 424 SUPERFAMILY SSF55681 3 317 1.24E-97 T 14-10-2018 GYO_2996 a473723467ec586b2cd24abc7f6f4a86 424 Gene3D G3DSA:3.40.50.800 329 416 4.9E-27 T 14-10-2018 IPR036621 Anticodon-binding domain superfamily GYO_2996 a473723467ec586b2cd24abc7f6f4a86 424 TIGRFAM TIGR00442 hisS: histidine--tRNA ligase 5 410 2.0E-159 T 14-10-2018 IPR015807 Histidine-tRNA ligase GO:0004821|GO:0005524|GO:0006427 KEGG: 00970+6.1.1.21 GYO_2996 a473723467ec586b2cd24abc7f6f4a86 424 SUPERFAMILY SSF52954 331 419 8.16E-25 T 14-10-2018 GYO_2996 a473723467ec586b2cd24abc7f6f4a86 424 Gene3D G3DSA:3.30.930.10 3 323 4.6E-116 T 14-10-2018 GYO_2996 a473723467ec586b2cd24abc7f6f4a86 424 Hamap MF_00127 Histidine--tRNA ligase [hisS]. 1 420 34.327 T 14-10-2018 IPR015807 Histidine-tRNA ligase GO:0004821|GO:0005524|GO:0006427 KEGG: 00970+6.1.1.21 GYO_2996 a473723467ec586b2cd24abc7f6f4a86 424 Pfam PF03129 Anticodon binding domain 332 420 6.0E-19 T 14-10-2018 IPR004154 Anticodon-binding GYO_2996 a473723467ec586b2cd24abc7f6f4a86 424 PIRSF PIRSF001549 1 422 2.6E-121 T 14-10-2018 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit GO:0005737 GYO_3190 bafa5e1b77bc6daa43cce1647796ba06 170 SMART SM00852 17 162 3.3E-25 T 14-10-2018 IPR001453 MoaB/Mog domain GYO_3190 bafa5e1b77bc6daa43cce1647796ba06 170 Gene3D G3DSA:3.40.980.10 1 169 6.0E-49 T 14-10-2018 IPR036425 MoaB/Mog-like domain superfamily GYO_3190 bafa5e1b77bc6daa43cce1647796ba06 170 Pfam PF00994 Probable molybdopterin binding domain 18 161 4.3E-35 T 14-10-2018 IPR001453 MoaB/Mog domain GYO_3190 bafa5e1b77bc6daa43cce1647796ba06 170 PIRSF PIRSF006443 1 170 4.0E-69 T 14-10-2018 IPR012245 Molybdenum cofactor biosynthesis protein MoaB GO:0006777 GYO_3190 bafa5e1b77bc6daa43cce1647796ba06 170 ProSitePatterns PS01078 Molybdenum cofactor biosynthesis proteins signature 1. 75 88 - T 14-10-2018 IPR008284 Molybdenum cofactor biosynthesis, conserved site GO:0006777 Reactome: R-HSA-947581 GYO_3190 bafa5e1b77bc6daa43cce1647796ba06 170 SUPERFAMILY SSF53218 8 167 1.07E-41 T 14-10-2018 IPR036425 MoaB/Mog-like domain superfamily GYO_3190 bafa5e1b77bc6daa43cce1647796ba06 170 TIGRFAM TIGR00177 molyb_syn: molybdenum cofactor synthesis domain 14 157 2.5E-38 T 14-10-2018 IPR001453 MoaB/Mog domain GYO_2794 2d27723e727d9f711fd892a5489509cc 301 SUPERFAMILY SSF52540 11 206 6.04E-48 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase GYO_2794 2d27723e727d9f711fd892a5489509cc 301 Gene3D G3DSA:3.30.300.20 186 298 1.2E-43 T 14-10-2018 IPR015946 K homology domain-like, alpha/beta GYO_2794 2d27723e727d9f711fd892a5489509cc 301 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 87 102 4.6E-5 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 GYO_2794 2d27723e727d9f711fd892a5489509cc 301 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 11 31 4.6E-5 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 GYO_2794 2d27723e727d9f711fd892a5489509cc 301 Gene3D G3DSA:3.40.50.300 3 185 8.8E-48 T 14-10-2018 GYO_2794 2d27723e727d9f711fd892a5489509cc 301 TIGRFAM TIGR00436 era: GTP-binding protein Era 9 279 9.9E-120 T 14-10-2018 IPR005662 GTP-binding protein Era GO:0003723|GO:0005525|GO:0005622 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 GYO_2794 2d27723e727d9f711fd892a5489509cc 301 Hamap MF_00367 GTPase Era [era]. 6 296 38.957 T 14-10-2018 IPR005662 GTP-binding protein Era GO:0003723|GO:0005525|GO:0005622 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 GYO_2794 2d27723e727d9f711fd892a5489509cc 301 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 9 169 3.5E-28 T 14-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 GYO_2794 2d27723e727d9f711fd892a5489509cc 301 SUPERFAMILY SSF54814 182 297 3.66E-43 T 14-10-2018 IPR009019 K homology domain superfamily, prokaryotic type GO:0003723 GYO_2794 2d27723e727d9f711fd892a5489509cc 301 Pfam PF01926 50S ribosome-binding GTPase 11 125 2.0E-24 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 GYO_2794 2d27723e727d9f711fd892a5489509cc 301 Pfam PF07650 KH domain 208 285 2.1E-22 T 14-10-2018 IPR004044 K Homology domain, type 2 GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 GYO_4377 5e1626b39afe62f991a8f285736498eb 344 Gene3D G3DSA:3.40.50.720 4 320 1.8E-121 T 14-10-2018 GYO_4377 5e1626b39afe62f991a8f285736498eb 344 SUPERFAMILY SSF51735 3 154 3.43E-41 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily GYO_4377 5e1626b39afe62f991a8f285736498eb 344 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 3 125 1.8E-28 T 14-10-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 GYO_4377 5e1626b39afe62f991a8f285736498eb 344 Gene3D G3DSA:3.30.360.10 144 266 1.8E-121 T 14-10-2018 GYO_4377 5e1626b39afe62f991a8f285736498eb 344 Pfam PF02894 Oxidoreductase family, C-terminal alpha/beta domain 137 239 4.8E-15 T 14-10-2018 IPR004104 Oxidoreductase, C-terminal GO:0016491|GO:0055114 GYO_4377 5e1626b39afe62f991a8f285736498eb 344 Hamap MF_01671 Inositol 2-dehydrogenase/D-chiro-inositol 3-dehydrogenase [iolG]. 1 337 51.653 T 14-10-2018 IPR023794 Inositol 2-dehydrogenase/D-chiro-inositol 3-dehydrogenase GO:0019310|GO:0050112|GO:0055114 KEGG: 00521+1.1.1.18|KEGG: 00562+1.1.1.18|MetaCyc: PWY-5940|MetaCyc: PWY-7237|MetaCyc: PWY-7241 GYO_4377 5e1626b39afe62f991a8f285736498eb 344 SUPERFAMILY SSF55347 132 284 2.35E-16 T 14-10-2018 GYO_0375 e24c7d11365b9aea1e2d7e953f13f7f9 600 Gene3D G3DSA:3.60.20.10 2 239 5.4E-70 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal GYO_0375 e24c7d11365b9aea1e2d7e953f13f7f9 600 TIGRFAM TIGR01135 glmS: glutamine-fructose-6-phosphate transaminase (isomerizing) 2 600 1.1E-233 T 14-10-2018 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising GO:0004360|GO:1901137 KEGG: 00250+2.6.1.16|KEGG: 00520+2.6.1.16|MetaCyc: PWY-6749|Reactome: R-HSA-446210 GYO_0375 e24c7d11365b9aea1e2d7e953f13f7f9 600 Hamap MF_00164 Glutamine--fructose-6-phosphate aminotransferase [isomerizing] [glmS]. 1 600 38.854 T 14-10-2018 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising GO:0004360|GO:1901137 KEGG: 00250+2.6.1.16|KEGG: 00520+2.6.1.16|MetaCyc: PWY-6749|Reactome: R-HSA-446210 GYO_0375 e24c7d11365b9aea1e2d7e953f13f7f9 600 SUPERFAMILY SSF53697 244 600 4.27E-96 T 14-10-2018 GYO_0375 e24c7d11365b9aea1e2d7e953f13f7f9 600 Pfam PF13522 Glutamine amidotransferase domain 62 191 1.3E-20 T 14-10-2018 GYO_0375 e24c7d11365b9aea1e2d7e953f13f7f9 600 Gene3D G3DSA:3.40.50.10490 444 600 1.4E-61 T 14-10-2018 GYO_0375 e24c7d11365b9aea1e2d7e953f13f7f9 600 SUPERFAMILY SSF56235 2 234 2.14E-64 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal GYO_0375 e24c7d11365b9aea1e2d7e953f13f7f9 600 Gene3D G3DSA:3.40.50.10490 243 442 4.1E-61 T 14-10-2018 GYO_0375 e24c7d11365b9aea1e2d7e953f13f7f9 600 Pfam PF01380 SIS domain 289 413 2.7E-36 T 14-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 GYO_0375 e24c7d11365b9aea1e2d7e953f13f7f9 600 Pfam PF01380 SIS domain 457 582 9.8E-22 T 14-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 GYO_4215 a9438ae9ac5141e43b53d7980b803283 223 Gene3D G3DSA:1.10.357.10 1 205 2.7E-21 T 14-10-2018 GYO_4215 a9438ae9ac5141e43b53d7980b803283 223 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 38 61 3.7E-6 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 GYO_4215 a9438ae9ac5141e43b53d7980b803283 223 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 17 30 3.7E-6 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 GYO_4215 a9438ae9ac5141e43b53d7980b803283 223 SUPERFAMILY SSF48498 131 198 2.8E-6 T 14-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily GYO_4215 a9438ae9ac5141e43b53d7980b803283 223 SUPERFAMILY SSF46689 5 66 3.83E-13 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 GYO_4215 a9438ae9ac5141e43b53d7980b803283 223 Pfam PF00440 Bacterial regulatory proteins, tetR family 18 62 4.8E-14 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 GYO_0089 730bbf9414430b6811af0e1cf7b707c6 194 SUPERFAMILY SSF52317 1 189 4.01E-57 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like GYO_0089 730bbf9414430b6811af0e1cf7b707c6 194 Gene3D G3DSA:3.40.50.880 1 190 6.0E-64 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like GYO_0089 730bbf9414430b6811af0e1cf7b707c6 194 PRINTS PR00097 Anthranilate synthase component II signature 74 85 2.5E-35 T 14-10-2018 GYO_0089 730bbf9414430b6811af0e1cf7b707c6 194 PRINTS PR00097 Anthranilate synthase component II signature 99 107 2.5E-35 T 14-10-2018 GYO_0089 730bbf9414430b6811af0e1cf7b707c6 194 PRINTS PR00097 Anthranilate synthase component II signature 47 56 2.5E-35 T 14-10-2018 GYO_0089 730bbf9414430b6811af0e1cf7b707c6 194 PRINTS PR00097 Anthranilate synthase component II signature 119 131 2.5E-35 T 14-10-2018 GYO_0089 730bbf9414430b6811af0e1cf7b707c6 194 PRINTS PR00097 Anthranilate synthase component II signature 2 16 2.5E-35 T 14-10-2018 GYO_0089 730bbf9414430b6811af0e1cf7b707c6 194 PRINTS PR00097 Anthranilate synthase component II signature 164 177 2.5E-35 T 14-10-2018 GYO_0089 730bbf9414430b6811af0e1cf7b707c6 194 TIGRFAM TIGR00566 trpG_papA: glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase 1 186 5.7E-94 T 14-10-2018 IPR006221 Anthranilate synthase/para-aminobenzoate synthase like domain KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 GYO_0089 730bbf9414430b6811af0e1cf7b707c6 194 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 44 58 8.5E-7 T 14-10-2018 GYO_0089 730bbf9414430b6811af0e1cf7b707c6 194 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 74 90 8.5E-7 T 14-10-2018 GYO_0089 730bbf9414430b6811af0e1cf7b707c6 194 PRINTS PR00096 Glutamine amidotransferase superfamily signature 47 56 4.9E-13 T 14-10-2018 GYO_0089 730bbf9414430b6811af0e1cf7b707c6 194 PRINTS PR00096 Glutamine amidotransferase superfamily signature 74 85 4.9E-13 T 14-10-2018 GYO_0089 730bbf9414430b6811af0e1cf7b707c6 194 PRINTS PR00096 Glutamine amidotransferase superfamily signature 164 177 4.9E-13 T 14-10-2018 GYO_0089 730bbf9414430b6811af0e1cf7b707c6 194 Pfam PF00117 Glutamine amidotransferase class-I 4 185 1.8E-56 T 14-10-2018 IPR017926 Glutamine amidotransferase GYO_3258 f0e24cda0a4a6407c1107921ea5b8b31 413 SUPERFAMILY SSF55347 119 335 6.76E-30 T 14-10-2018 GYO_3258 f0e24cda0a4a6407c1107921ea5b8b31 413 SUPERFAMILY SSF51735 12 145 4.17E-30 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily GYO_3258 f0e24cda0a4a6407c1107921ea5b8b31 413 Gene3D G3DSA:3.40.50.720 3 116 1.5E-16 T 14-10-2018 GYO_3258 f0e24cda0a4a6407c1107921ea5b8b31 413 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 2 114 8.8E-20 T 14-10-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 GYO_3258 f0e24cda0a4a6407c1107921ea5b8b31 413 Pfam PF02894 Oxidoreductase family, C-terminal alpha/beta domain 126 260 6.1E-34 T 14-10-2018 IPR004104 Oxidoreductase, C-terminal GO:0016491|GO:0055114 GYO_3494 802584f9556e3aa8dc638b4ef29df964 198 Pfam PF00174 Oxidoreductase molybdopterin binding domain 32 178 1.8E-37 T 14-10-2018 IPR000572 Oxidoreductase, molybdopterin-binding domain GO:0042128 Reactome: R-HSA-1614517 GYO_3494 802584f9556e3aa8dc638b4ef29df964 198 Gene3D G3DSA:3.90.420.10 10 196 1.4E-48 T 14-10-2018 IPR036374 Oxidoreductase, molybdopterin-binding domain superfamily GO:0042128 Reactome: R-HSA-1614517 GYO_3494 802584f9556e3aa8dc638b4ef29df964 198 SUPERFAMILY SSF56524 14 198 5.49E-63 T 14-10-2018 IPR036374 Oxidoreductase, molybdopterin-binding domain superfamily GO:0042128 Reactome: R-HSA-1614517 GYO_2396 3a4f61a5278b85db9e4398edef409a83 187 Pfam PF09911 Uncharacterized protein conserved in bacteria (DUF2140) 2 183 1.5E-61 T 14-10-2018 IPR018672 Protein of unknown function DUF2140 GYO_3035 3ded766918fdf3c6fa32e489c8fa6846 94 PRINTS PR00063 Ribosomal protein L27 signature 12 36 4.6E-39 T 14-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 GYO_3035 3ded766918fdf3c6fa32e489c8fa6846 94 PRINTS PR00063 Ribosomal protein L27 signature 62 86 4.6E-39 T 14-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 GYO_3035 3ded766918fdf3c6fa32e489c8fa6846 94 PRINTS PR00063 Ribosomal protein L27 signature 37 61 4.6E-39 T 14-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 GYO_3035 3ded766918fdf3c6fa32e489c8fa6846 94 ProSitePatterns PS00831 Ribosomal protein L27 signature. 42 56 - T 14-10-2018 IPR018261 Ribosomal protein L27, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 GYO_3035 3ded766918fdf3c6fa32e489c8fa6846 94 Gene3D G3DSA:2.40.50.100 28 93 1.3E-26 T 14-10-2018 GYO_3035 3ded766918fdf3c6fa32e489c8fa6846 94 TIGRFAM TIGR00062 L27: ribosomal protein bL27 9 89 2.2E-41 T 14-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 GYO_3035 3ded766918fdf3c6fa32e489c8fa6846 94 Hamap MF_00539 50S ribosomal protein L27 [rpmA]. 9 92 27.308 T 14-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 GYO_3035 3ded766918fdf3c6fa32e489c8fa6846 94 SUPERFAMILY SSF110324 10 91 2.3E-32 T 14-10-2018 GYO_3035 3ded766918fdf3c6fa32e489c8fa6846 94 Pfam PF01016 Ribosomal L27 protein 10 89 5.3E-35 T 14-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 GYO_3035 3ded766918fdf3c6fa32e489c8fa6846 94 ProDom PD003114 RIBOSOMAL L27 50S RIBONUCLEOPROTEIN CHLOROPLAST MITOCHONDRIAL PEPTIDE 60S TRANSIT PRECURSOR 36 77 2.0E-17 T 14-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 GYO_3649 c6c74bde3cca2eb8526ff283500764d9 260 PIRSF PIRSF004846 1 260 6.3E-90 T 14-10-2018 IPR005950 Molybdate ABC transporter, substrate-binding protein GO:0015689 GYO_3649 c6c74bde3cca2eb8526ff283500764d9 260 SUPERFAMILY SSF53850 35 258 6.37E-67 T 14-10-2018 GYO_3649 c6c74bde3cca2eb8526ff283500764d9 260 Gene3D G3DSA:3.40.190.10 115 220 3.2E-78 T 14-10-2018 GYO_3649 c6c74bde3cca2eb8526ff283500764d9 260 TIGRFAM TIGR01256 modA: molybdate ABC transporter, periplasmic molybdate-binding protein 41 256 2.1E-65 T 14-10-2018 IPR005950 Molybdate ABC transporter, substrate-binding protein GO:0015689 GYO_3649 c6c74bde3cca2eb8526ff283500764d9 260 Pfam PF13531 Bacterial extracellular solute-binding protein 36 257 5.5E-49 T 14-10-2018 GYO_3649 c6c74bde3cca2eb8526ff283500764d9 260 Gene3D G3DSA:3.40.190.10 38 257 3.2E-78 T 14-10-2018 GYO_0121 7c31ea749e5d0e7c6ec09cbd03040b81 217 Gene3D G3DSA:1.10.3130.10 2 67 2.4E-26 T 14-10-2018 GYO_0121 7c31ea749e5d0e7c6ec09cbd03040b81 217 Gene3D G3DSA:2.160.10.10 68 185 4.4E-37 T 14-10-2018 GYO_0121 7c31ea749e5d0e7c6ec09cbd03040b81 217 PIRSF PIRSF000441 1 217 2.9E-84 T 14-10-2018 IPR005881 Serine O-acetyltransferase GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|KEGG: 00999+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274|MetaCyc: PWY-7870 GYO_0121 7c31ea749e5d0e7c6ec09cbd03040b81 217 Pfam PF06426 Serine acetyltransferase, N-terminal 5 36 1.9E-4 T 14-10-2018 IPR010493 Serine acetyltransferase, N-terminal GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|KEGG: 00999+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274|MetaCyc: PWY-7870 GYO_0121 7c31ea749e5d0e7c6ec09cbd03040b81 217 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 127 155 - T 14-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 GYO_0121 7c31ea749e5d0e7c6ec09cbd03040b81 217 SUPERFAMILY SSF51161 2 169 9.84E-57 T 14-10-2018 IPR011004 Trimeric LpxA-like superfamily GYO_0121 7c31ea749e5d0e7c6ec09cbd03040b81 217 TIGRFAM TIGR01172 cysE: serine O-acetyltransferase 7 167 4.5E-79 T 14-10-2018 IPR005881 Serine O-acetyltransferase GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|KEGG: 00999+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274|MetaCyc: PWY-7870 GYO_0121 7c31ea749e5d0e7c6ec09cbd03040b81 217 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 73 109 0.0014 T 14-10-2018 IPR001451 Hexapeptide repeat GYO_0121 7c31ea749e5d0e7c6ec09cbd03040b81 217 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 118 152 3.8E-7 T 14-10-2018 IPR001451 Hexapeptide repeat GYO_2783 ca2b32e21d42460a493e0ec43842911f 120 Gene3D G3DSA:1.10.760.10 50 120 4.3E-21 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 GYO_2783 ca2b32e21d42460a493e0ec43842911f 120 PIRSF PIRSF000025 1 120 3.8E-40 T 14-10-2018 IPR012218 Cytochrome c, Bacillus subtilis c550-related GO:0005506|GO:0009055|GO:0016021|GO:0020037 GYO_2783 ca2b32e21d42460a493e0ec43842911f 120 SUPERFAMILY SSF46626 7 118 4.15E-16 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 GYO_2783 ca2b32e21d42460a493e0ec43842911f 120 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 49 116 2.4E-10 T 14-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 GYO_1806 c85e8d66112e8c89b550e4a0324dbdcd 212 Pfam PF06335 Protein of unknown function (DUF1054) 6 203 2.7E-85 T 14-10-2018 IPR009403 Protein of unknown function UPF0637 GYO_1806 c85e8d66112e8c89b550e4a0324dbdcd 212 Gene3D G3DSA:3.30.930.20 1 212 7.0E-95 T 14-10-2018 GYO_1806 c85e8d66112e8c89b550e4a0324dbdcd 212 PIRSF PIRSF021332 1 209 1.7E-92 T 14-10-2018 IPR009403 Protein of unknown function UPF0637 GYO_1806 c85e8d66112e8c89b550e4a0324dbdcd 212 Hamap MF_01851 UPF0637 protein . 5 205 38.085 T 14-10-2018 IPR009403 Protein of unknown function UPF0637 GYO_1806 c85e8d66112e8c89b550e4a0324dbdcd 212 SUPERFAMILY SSF142913 3 209 6.54E-84 T 14-10-2018 GYO_3501 619fcfed13f88c6b768830b2c1545461 61 Pfam PF17302 Family of unknown function (DUF5351) 26 54 4.3E-18 T 14-10-2018 IPR035272 Protein of unknown function DUF5351 GYO_3501 619fcfed13f88c6b768830b2c1545461 61 SUPERFAMILY SSF57938 20 54 2.49E-5 T 14-10-2018 IPR036410 Heat shock protein DnaJ, cysteine-rich domain superfamily GYO_3501 619fcfed13f88c6b768830b2c1545461 61 Gene3D G3DSA:2.10.230.20 15 58 5.9E-6 T 14-10-2018 GYO_3501 619fcfed13f88c6b768830b2c1545461 61 ProDom PD049837 YUIA BH3406 15 54 7.0E-17 T 14-10-2018 IPR035272 Protein of unknown function DUF5351 GYO_0554 20c7207201a17302fc6ca293ebe62fc2 477 ProSitePatterns PS00653 Glycosyl hydrolases family 1 N-terminal signature. 13 27 - T 14-10-2018 IPR033132 Glycosyl hydrolases family 1, N-terminal conserved site GYO_0554 20c7207201a17302fc6ca293ebe62fc2 477 Pfam PF00232 Glycosyl hydrolase family 1 7 474 1.3E-193 T 14-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 GYO_0554 20c7207201a17302fc6ca293ebe62fc2 477 ProSitePatterns PS00572 Glycosyl hydrolases family 1 active site. 374 382 - T 14-10-2018 IPR018120 Glycoside hydrolase family 1, active site GYO_0554 20c7207201a17302fc6ca293ebe62fc2 477 PRINTS PR00131 Glycosyl hydrolase family 1 signature 415 432 6.5E-18 T 14-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 GYO_0554 20c7207201a17302fc6ca293ebe62fc2 477 PRINTS PR00131 Glycosyl hydrolase family 1 signature 439 451 6.5E-18 T 14-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 GYO_0554 20c7207201a17302fc6ca293ebe62fc2 477 PRINTS PR00131 Glycosyl hydrolase family 1 signature 394 405 6.5E-18 T 14-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 GYO_0554 20c7207201a17302fc6ca293ebe62fc2 477 PRINTS PR00131 Glycosyl hydrolase family 1 signature 292 306 6.5E-18 T 14-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 GYO_0554 20c7207201a17302fc6ca293ebe62fc2 477 PRINTS PR00131 Glycosyl hydrolase family 1 signature 374 382 6.5E-18 T 14-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 GYO_0554 20c7207201a17302fc6ca293ebe62fc2 477 Gene3D G3DSA:3.20.20.80 2 477 2.2E-185 T 14-10-2018 GYO_0554 20c7207201a17302fc6ca293ebe62fc2 477 SUPERFAMILY SSF51445 8 475 1.43E-173 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily GYO_0374 202b456646b1050c117faa6f7182b3fc 448 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 233 248 7.4E-12 T 14-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 GYO_0374 202b456646b1050c117faa6f7182b3fc 448 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 93 107 7.4E-12 T 14-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 GYO_0374 202b456646b1050c117faa6f7182b3fc 448 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 173 192 7.4E-12 T 14-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 GYO_0374 202b456646b1050c117faa6f7182b3fc 448 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 158 253 2.2E-15 T 14-10-2018 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 GYO_0374 202b456646b1050c117faa6f7182b3fc 448 Gene3D G3DSA:3.40.120.10 174 362 1.6E-72 T 14-10-2018 GYO_0374 202b456646b1050c117faa6f7182b3fc 448 SUPERFAMILY SSF53738 257 366 7.85E-33 T 14-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 GYO_0374 202b456646b1050c117faa6f7182b3fc 448 Gene3D G3DSA:3.30.310.50 370 448 2.2E-30 T 14-10-2018 GYO_0374 202b456646b1050c117faa6f7182b3fc 448 SUPERFAMILY SSF53738 158 256 3.49E-26 T 14-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 GYO_0374 202b456646b1050c117faa6f7182b3fc 448 SUPERFAMILY SSF53738 3 180 6.28E-46 T 14-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 GYO_0374 202b456646b1050c117faa6f7182b3fc 448 Hamap MF_01554_B Phosphoglucosamine mutase [glmM]. 1 444 45.405 T 14-10-2018 IPR006352 Phosphoglucosamine mutase, bacterial type GO:0000287|GO:0005975|GO:0008966 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 GYO_0374 202b456646b1050c117faa6f7182b3fc 448 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 373 441 8.6E-20 T 14-10-2018 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 GYO_0374 202b456646b1050c117faa6f7182b3fc 448 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 3 134 5.4E-43 T 14-10-2018 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 GYO_0374 202b456646b1050c117faa6f7182b3fc 448 Gene3D G3DSA:3.40.120.10 256 339 1.6E-72 T 14-10-2018 GYO_0374 202b456646b1050c117faa6f7182b3fc 448 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 257 368 1.7E-35 T 14-10-2018 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 GYO_0374 202b456646b1050c117faa6f7182b3fc 448 Gene3D G3DSA:3.40.120.10 3 155 6.4E-58 T 14-10-2018 GYO_0374 202b456646b1050c117faa6f7182b3fc 448 TIGRFAM TIGR01455 glmM: phosphoglucosamine mutase 5 442 5.1E-187 T 14-10-2018 IPR006352 Phosphoglucosamine mutase, bacterial type GO:0000287|GO:0005975|GO:0008966 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 GYO_0374 202b456646b1050c117faa6f7182b3fc 448 SUPERFAMILY SSF55957 357 446 3.4E-28 T 14-10-2018 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 GYO_0374 202b456646b1050c117faa6f7182b3fc 448 ProSitePatterns PS00710 Phosphoglucomutase and phosphomannomutase phosphoserine signature. 94 103 - T 14-10-2018 IPR016066 Alpha-D-phosphohexomutase, conserved site GO:0000287 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 GYO_2738 e1eb75728d13ca5c22010bacf8431936 442 Gene3D G3DSA:3.10.580.10 206 361 5.4E-47 T 14-10-2018 GYO_2738 e1eb75728d13ca5c22010bacf8431936 442 Pfam PF00571 CBS domain 227 281 6.7E-4 T 14-10-2018 IPR000644 CBS domain GYO_2738 e1eb75728d13ca5c22010bacf8431936 442 Pfam PF00571 CBS domain 301 349 4.1E-4 T 14-10-2018 IPR000644 CBS domain GYO_2738 e1eb75728d13ca5c22010bacf8431936 442 Pfam PF01595 Domain of unknown function DUF21 17 210 5.1E-50 T 14-10-2018 IPR002550 CNNM, transmembrane domain GYO_2738 e1eb75728d13ca5c22010bacf8431936 442 Pfam PF03471 Transporter associated domain 366 440 5.3E-13 T 14-10-2018 IPR005170 Transporter-associated domain GYO_2738 e1eb75728d13ca5c22010bacf8431936 442 SUPERFAMILY SSF54631 213 352 5.81E-27 T 14-10-2018 GYO_2738 e1eb75728d13ca5c22010bacf8431936 442 Gene3D G3DSA:3.30.465.10 362 442 2.0E-14 T 14-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 GYO_2738 e1eb75728d13ca5c22010bacf8431936 442 SUPERFAMILY SSF56176 363 440 2.45E-14 T 14-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 GYO_2738 e1eb75728d13ca5c22010bacf8431936 442 SMART SM01091 365 442 3.1E-18 T 14-10-2018 IPR005170 Transporter-associated domain GYO_3061 a9946ffaf8bb3fd562a322f249050088 455 Pfam PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain 6 156 6.4E-47 T 14-10-2018 IPR015895 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, N-terminal GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 GYO_3061 a9946ffaf8bb3fd562a322f249050088 455 SUPERFAMILY SSF51735 162 315 4.23E-39 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily GYO_3061 a9946ffaf8bb3fd562a322f249050088 455 PIRSF PIRSF000445 1 433 2.7E-158 T 14-10-2018 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 GYO_3061 a9946ffaf8bb3fd562a322f249050088 455 Gene3D G3DSA:3.40.50.720 161 313 6.0E-47 T 14-10-2018 GYO_3061 a9946ffaf8bb3fd562a322f249050088 455 ProSitePatterns PS00747 Glutamyl-tRNA reductase signature. 99 122 - T 14-10-2018 IPR018214 Glutamyl-tRNA reductase, conserved site GO:0008883|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 GYO_3061 a9946ffaf8bb3fd562a322f249050088 455 SUPERFAMILY SSF69742 1 158 6.54E-47 T 14-10-2018 IPR036343 Glutamyl-tRNA reductase, N-terminal domain superfamily GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 GYO_3061 a9946ffaf8bb3fd562a322f249050088 455 TIGRFAM TIGR01035 hemA: glutamyl-tRNA reductase 3 420 3.2E-177 T 14-10-2018 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 GYO_3061 a9946ffaf8bb3fd562a322f249050088 455 Hamap MF_00087 Glutamyl-tRNA reductase [hemA]. 2 417 30.611 T 14-10-2018 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 GYO_3061 a9946ffaf8bb3fd562a322f249050088 455 Pfam PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain 320 418 1.2E-20 T 14-10-2018 IPR015896 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, dimerisation domain GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 GYO_3061 a9946ffaf8bb3fd562a322f249050088 455 Pfam PF01488 Shikimate / quinate 5-dehydrogenase 171 306 1.1E-46 T 14-10-2018 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase GYO_3061 a9946ffaf8bb3fd562a322f249050088 455 Gene3D G3DSA:3.30.460.30 1 158 6.5E-55 T 14-10-2018 IPR036343 Glutamyl-tRNA reductase, N-terminal domain superfamily GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 GYO_3061 a9946ffaf8bb3fd562a322f249050088 455 SUPERFAMILY SSF69075 318 420 6.02E-17 T 14-10-2018 IPR036453 Glutamyl tRNA-reductase dimerization domain superfamily GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 GYO_0717 b11c5cede80666e9380396f802c376a0 249 SUPERFAMILY SSF51735 2 226 3.95E-45 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily GYO_0717 b11c5cede80666e9380396f802c376a0 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 124 140 1.6E-15 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR GYO_0717 b11c5cede80666e9380396f802c376a0 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 150 169 1.6E-15 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR GYO_0717 b11c5cede80666e9380396f802c376a0 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 77 88 1.6E-15 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR GYO_0717 b11c5cede80666e9380396f802c376a0 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 3 20 1.6E-15 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR GYO_0717 b11c5cede80666e9380396f802c376a0 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 173 190 1.6E-15 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR GYO_0717 b11c5cede80666e9380396f802c376a0 249 Pfam PF00106 short chain dehydrogenase 3 196 5.6E-35 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR GYO_0717 b11c5cede80666e9380396f802c376a0 249 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 137 165 - T 14-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 GYO_0717 b11c5cede80666e9380396f802c376a0 249 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 150 169 2.7E-7 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR GYO_0717 b11c5cede80666e9380396f802c376a0 249 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 77 88 2.7E-7 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR GYO_0717 b11c5cede80666e9380396f802c376a0 249 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 140 148 2.7E-7 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR GYO_0717 b11c5cede80666e9380396f802c376a0 249 Gene3D G3DSA:3.40.50.720 1 244 1.8E-44 T 14-10-2018 GYO_2756 229664376e12f1c1e82d0629514b1454 359 Gene3D G3DSA:3.40.50.2000 1 165 2.4E-18 T 14-10-2018 GYO_2756 229664376e12f1c1e82d0629514b1454 359 Pfam PF00534 Glycosyl transferases group 1 163 330 7.8E-40 T 14-10-2018 IPR001296 Glycosyl transferase, family 1 GYO_2756 229664376e12f1c1e82d0629514b1454 359 Gene3D G3DSA:3.40.50.2000 166 334 5.0E-38 T 14-10-2018 GYO_2756 229664376e12f1c1e82d0629514b1454 359 Pfam PF13439 Glycosyltransferase Family 4 64 159 1.4E-12 T 14-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 GYO_2756 229664376e12f1c1e82d0629514b1454 359 SUPERFAMILY SSF53756 1 355 6.67E-68 T 14-10-2018 GYO_0001 210dd15fa0d07b063f22c612a364984d 446 Gene3D G3DSA:1.10.8.60 277 345 3.2E-30 T 14-10-2018 GYO_0001 210dd15fa0d07b063f22c612a364984d 446 Pfam PF11638 DnaA N-terminal domain 7 66 2.0E-18 T 14-10-2018 IPR024633 DnaA N-terminal domain GYO_0001 210dd15fa0d07b063f22c612a364984d 446 Pfam PF00308 Bacterial dnaA protein 111 327 1.4E-107 T 14-10-2018 IPR013317 Chromosomal replication initiator protein DnaA GYO_0001 210dd15fa0d07b063f22c612a364984d 446 SMART SM00382 143 271 1.1E-10 T 14-10-2018 IPR003593 AAA+ ATPase domain GYO_0001 210dd15fa0d07b063f22c612a364984d 446 Gene3D G3DSA:1.10.1750.10 346 446 1.6E-36 T 14-10-2018 IPR010921 Trp repressor/replication initiator GO:0043565 GYO_0001 210dd15fa0d07b063f22c612a364984d 446 Gene3D G3DSA:3.30.300.180 1 82 1.9E-33 T 14-10-2018 IPR038454 DnaA, N-terminal domain superfamily GYO_0001 210dd15fa0d07b063f22c612a364984d 446 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 144 164 7.8E-54 T 14-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like GYO_0001 210dd15fa0d07b063f22c612a364984d 446 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 176 190 7.8E-54 T 14-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like GYO_0001 210dd15fa0d07b063f22c612a364984d 446 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 242 269 7.8E-54 T 14-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like GYO_0001 210dd15fa0d07b063f22c612a364984d 446 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 405 424 7.8E-54 T 14-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like GYO_0001 210dd15fa0d07b063f22c612a364984d 446 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 208 222 7.8E-54 T 14-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like GYO_0001 210dd15fa0d07b063f22c612a364984d 446 SUPERFAMILY SSF48295 342 446 1.12E-36 T 14-10-2018 IPR010921 Trp repressor/replication initiator GO:0043565 GYO_0001 210dd15fa0d07b063f22c612a364984d 446 Pfam PF08299 Bacterial dnaA protein helix-turn-helix 356 424 5.4E-31 T 14-10-2018 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 GYO_0001 210dd15fa0d07b063f22c612a364984d 446 SUPERFAMILY SSF52540 111 323 4.12E-48 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase GYO_0001 210dd15fa0d07b063f22c612a364984d 446 Hamap MF_00377 Chromosomal replication initiator protein DnaA [dnaA]. 5 446 35.322 T 14-10-2018 IPR001957 Chromosomal replication control, initiator DnaA GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 GYO_0001 210dd15fa0d07b063f22c612a364984d 446 ProSitePatterns PS01008 DnaA protein signature. 405 424 - T 14-10-2018 IPR018312 Chromosomal replication control, initiator DnaA, conserved site GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 GYO_0001 210dd15fa0d07b063f22c612a364984d 446 SMART SM00760 355 424 4.6E-42 T 14-10-2018 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 GYO_0001 210dd15fa0d07b063f22c612a364984d 446 TIGRFAM TIGR00362 DnaA: chromosomal replication initiator protein DnaA 8 445 1.4E-189 T 14-10-2018 IPR001957 Chromosomal replication control, initiator DnaA GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 GYO_0001 210dd15fa0d07b063f22c612a364984d 446 Gene3D G3DSA:3.40.50.300 94 275 4.2E-55 T 14-10-2018 GYO_1058 c7d5f0eec462a4beb843413f40f65f35 391 SUPERFAMILY SSF103473 4 378 1.03E-50 T 14-10-2018 IPR036259 MFS transporter superfamily GYO_1058 c7d5f0eec462a4beb843413f40f65f35 391 Gene3D G3DSA:1.20.1250.20 2 189 9.8E-23 T 14-10-2018 GYO_1058 c7d5f0eec462a4beb843413f40f65f35 391 Pfam PF07690 Major Facilitator Superfamily 211 378 8.3E-21 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 GYO_1058 c7d5f0eec462a4beb843413f40f65f35 391 Pfam PF07690 Major Facilitator Superfamily 10 190 1.3E-18 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 GYO_1058 c7d5f0eec462a4beb843413f40f65f35 391 Gene3D G3DSA:1.20.1250.20 198 390 4.2E-22 T 14-10-2018 GYO_3738 c5755fd027291c739cb385ef40c4eb3c 200 SMART SM00421 137 194 2.1E-20 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 GYO_3738 c5755fd027291c739cb385ef40c4eb3c 200 Gene3D G3DSA:3.40.50.12740 2 200 1.7E-55 T 14-10-2018 GYO_3738 c5755fd027291c739cb385ef40c4eb3c 200 Pfam PF00072 Response regulator receiver domain 5 116 1.8E-23 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 GYO_3738 c5755fd027291c739cb385ef40c4eb3c 200 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 140 154 5.9E-11 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 GYO_3738 c5755fd027291c739cb385ef40c4eb3c 200 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 170 182 5.9E-11 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 GYO_3738 c5755fd027291c739cb385ef40c4eb3c 200 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 154 170 5.9E-11 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 GYO_3738 c5755fd027291c739cb385ef40c4eb3c 200 SUPERFAMILY SSF52172 1 129 1.99E-29 T 14-10-2018 IPR011006 CheY-like superfamily GYO_3738 c5755fd027291c739cb385ef40c4eb3c 200 SUPERFAMILY SSF46894 127 200 1.56E-17 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 GYO_3738 c5755fd027291c739cb385ef40c4eb3c 200 SMART SM00448 2 115 1.3E-25 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 GYO_3738 c5755fd027291c739cb385ef40c4eb3c 200 Pfam PF00196 Bacterial regulatory proteins, luxR family 139 194 8.0E-16 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 GYO_1263 9211e85d0d4f1e7be45ba82cb17f65f4 673 SUPERFAMILY SSF52540 426 665 7.56E-83 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase GYO_1263 9211e85d0d4f1e7be45ba82cb17f65f4 673 Gene3D G3DSA:3.40.50.300 427 672 8.8E-87 T 14-10-2018 GYO_1263 9211e85d0d4f1e7be45ba82cb17f65f4 673 SUPERFAMILY SSF90123 4 416 1.57E-69 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 GYO_1263 9211e85d0d4f1e7be45ba82cb17f65f4 673 Pfam PF00005 ABC transporter 446 595 7.2E-31 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 GYO_1263 9211e85d0d4f1e7be45ba82cb17f65f4 673 SMART SM00382 455 641 2.3E-15 T 14-10-2018 IPR003593 AAA+ ATPase domain GYO_1263 9211e85d0d4f1e7be45ba82cb17f65f4 673 ProSitePatterns PS00211 ABC transporters family signature. 567 581 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 GYO_1263 9211e85d0d4f1e7be45ba82cb17f65f4 673 Pfam PF00664 ABC transporter transmembrane region 148 385 4.2E-40 T 14-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 GYO_1263 9211e85d0d4f1e7be45ba82cb17f65f4 673 Gene3D G3DSA:1.20.1560.10 130 414 1.5E-65 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 GYO_3683 d8ae30a1fd9c0be391477d69204d5652 135 SUPERFAMILY SSF47413 2 65 1.75E-16 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 GYO_3683 d8ae30a1fd9c0be391477d69204d5652 135 Pfam PF13560 Helix-turn-helix domain 4 59 7.5E-16 T 14-10-2018 GYO_3683 d8ae30a1fd9c0be391477d69204d5652 135 Gene3D G3DSA:1.10.260.40 1 68 6.4E-18 T 14-10-2018 GYO_3683 d8ae30a1fd9c0be391477d69204d5652 135 SMART SM00530 7 63 6.3E-16 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 GYO_3683 d8ae30a1fd9c0be391477d69204d5652 135 PIRSF PIRSF019364 1 135 2.7E-72 T 14-10-2018 IPR016759 HTH-type transcriptional repressor RghR GO:0006355 GYO_0239 bb6cd267b5d7bfef3426bebc101b8101 1780 SUPERFAMILY SSF53955 1562 1634 7.39E-12 T 14-10-2018 IPR023346 Lysozyme-like domain superfamily GYO_0239 bb6cd267b5d7bfef3426bebc101b8101 1780 Pfam PF01464 Transglycosylase SLT domain 1549 1673 2.4E-20 T 14-10-2018 IPR008258 Transglycosylase SLT domain 1 GYO_0239 bb6cd267b5d7bfef3426bebc101b8101 1780 Gene3D G3DSA:1.10.530.10 1547 1654 1.6E-6 T 14-10-2018 GYO_0318 bb6cd267b5d7bfef3426bebc101b8101 1780 SUPERFAMILY SSF53955 1562 1634 7.39E-12 T 14-10-2018 IPR023346 Lysozyme-like domain superfamily GYO_0318 bb6cd267b5d7bfef3426bebc101b8101 1780 Pfam PF01464 Transglycosylase SLT domain 1549 1673 2.4E-20 T 14-10-2018 IPR008258 Transglycosylase SLT domain 1 GYO_0318 bb6cd267b5d7bfef3426bebc101b8101 1780 Gene3D G3DSA:1.10.530.10 1547 1654 1.6E-6 T 14-10-2018 GYO_3937 e0365439220d78e3451df15ce8c4d528 880 SMART SM00287 630 700 3.0E-10 T 14-10-2018 IPR003646 SH3-like domain, bacterial-type GYO_3937 e0365439220d78e3451df15ce8c4d528 880 Pfam PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase 736 863 1.1E-12 T 14-10-2018 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain GO:0004040 GYO_3937 e0365439220d78e3451df15ce8c4d528 880 Pfam PF08239 Bacterial SH3 domain 639 680 2.8E-7 T 14-10-2018 IPR003646 SH3-like domain, bacterial-type GYO_3937 e0365439220d78e3451df15ce8c4d528 880 SMART SM00047 723 875 7.0E-64 T 14-10-2018 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain GO:0004040 GYO_3937 e0365439220d78e3451df15ce8c4d528 880 Gene3D G3DSA:2.30.30.40 623 691 4.9E-9 T 14-10-2018 GYO_3937 e0365439220d78e3451df15ce8c4d528 880 Gene3D G3DSA:1.10.530.10 732 867 2.8E-8 T 14-10-2018 GYO_3079 9fb623e8eb5c8f2b190c0929fa2b6bcd 274 Pfam PF11181 Heat induced stress protein YflT 5 109 8.8E-22 T 14-10-2018 IPR025889 General stress protein 17M-like domain GYO_3079 9fb623e8eb5c8f2b190c0929fa2b6bcd 274 TIGRFAM TIGR02271 TIGR02271: conserved domain 148 262 1.1E-48 T 14-10-2018 IPR019060 Domain of unknown function DUF2382 GYO_3079 9fb623e8eb5c8f2b190c0929fa2b6bcd 274 Pfam PF09557 Domain of unknown function (DUF2382) 148 255 7.3E-30 T 14-10-2018 IPR019060 Domain of unknown function DUF2382 GYO_3285 938a2d772bc3511ab92df9cf30cd230a 261 SUPERFAMILY SSF55785 21 129 1.05E-25 T 14-10-2018 IPR035965 PAS domain superfamily GYO_3285 938a2d772bc3511ab92df9cf30cd230a 261 Gene3D G3DSA:3.30.450.20 9 146 6.6E-48 T 14-10-2018 GYO_3285 938a2d772bc3511ab92df9cf30cd230a 261 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 17 134 2.2E-18 T 14-10-2018 IPR000014 PAS domain GYO_3285 938a2d772bc3511ab92df9cf30cd230a 261 Pfam PF01740 STAS domain 151 254 2.6E-8 T 14-10-2018 IPR002645 STAS domain GYO_3285 938a2d772bc3511ab92df9cf30cd230a 261 Pfam PF13426 PAS domain 26 128 2.9E-21 T 14-10-2018 IPR000014 PAS domain GYO_3285 938a2d772bc3511ab92df9cf30cd230a 261 SMART SM00086 89 129 2.3E-8 T 14-10-2018 IPR001610 PAC motif GYO_3285 938a2d772bc3511ab92df9cf30cd230a 261 SMART SM00091 14 84 0.0022 T 14-10-2018 IPR000014 PAS domain GYO_3285 938a2d772bc3511ab92df9cf30cd230a 261 Gene3D G3DSA:3.30.750.24 147 259 1.5E-29 T 14-10-2018 IPR036513 STAS domain superfamily GYO_3285 938a2d772bc3511ab92df9cf30cd230a 261 SUPERFAMILY SSF52091 148 258 1.53E-12 T 14-10-2018 IPR036513 STAS domain superfamily GYO_3854 080fbe0dedbea14d36657618c223c1a7 957 TIGRFAM TIGR00630 uvra: excinuclease ABC subunit A 5 922 0.0 T 14-10-2018 IPR004602 UvrABC system subunit A GO:0003677|GO:0006289|GO:0009380|GO:0016887 GYO_3854 080fbe0dedbea14d36657618c223c1a7 957 Gene3D G3DSA:3.40.50.300 8 595 2.0E-255 T 14-10-2018 GYO_3854 080fbe0dedbea14d36657618c223c1a7 957 Gene3D G3DSA:1.20.1580.10 691 828 2.2E-146 T 14-10-2018 GYO_3854 080fbe0dedbea14d36657618c223c1a7 957 Hamap MF_00205 UvrABC system protein A [uvrA]. 3 938 23.851 T 14-10-2018 IPR004602 UvrABC system subunit A GO:0003677|GO:0006289|GO:0009380|GO:0016887 GYO_3854 080fbe0dedbea14d36657618c223c1a7 957 Gene3D G3DSA:1.10.8.280 286 403 2.0E-255 T 14-10-2018 GYO_3854 080fbe0dedbea14d36657618c223c1a7 957 SUPERFAMILY SSF52540 614 912 8.05E-52 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase GYO_3854 080fbe0dedbea14d36657618c223c1a7 957 Pfam PF00005 ABC transporter 622 858 5.1E-10 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 GYO_3854 080fbe0dedbea14d36657618c223c1a7 957 Gene3D G3DSA:1.20.1580.10 92 492 2.0E-255 T 14-10-2018 GYO_3854 080fbe0dedbea14d36657618c223c1a7 957 ProSitePatterns PS00211 ABC transporters family signature. 828 842 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 GYO_3854 080fbe0dedbea14d36657618c223c1a7 957 SMART SM00382 631 906 6.0E-4 T 14-10-2018 IPR003593 AAA+ ATPase domain GYO_3854 080fbe0dedbea14d36657618c223c1a7 957 Gene3D G3DSA:3.30.190.20 132 241 2.0E-255 T 14-10-2018 GYO_3854 080fbe0dedbea14d36657618c223c1a7 957 ProSitePatterns PS00211 ABC transporters family signature. 487 501 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 GYO_3854 080fbe0dedbea14d36657618c223c1a7 957 SUPERFAMILY SSF52540 6 569 1.43E-47 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase GYO_3854 080fbe0dedbea14d36657618c223c1a7 957 Gene3D G3DSA:3.40.50.300 612 934 2.2E-146 T 14-10-2018 GYO_2595 557a5f58a2552e97df7e6cb8313fcea6 116 SMART SM00530 5 60 8.3E-14 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 GYO_2595 557a5f58a2552e97df7e6cb8313fcea6 116 Gene3D G3DSA:1.10.260.40 4 114 2.4E-18 T 14-10-2018 GYO_2595 557a5f58a2552e97df7e6cb8313fcea6 116 SUPERFAMILY SSF47413 4 65 3.22E-14 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 GYO_2595 557a5f58a2552e97df7e6cb8313fcea6 116 Pfam PF01381 Helix-turn-helix 8 60 3.9E-14 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 GYO_3350 16ec6292205d6187577a8dac39aab786 484 Pfam PF00534 Glycosyl transferases group 1 291 439 2.9E-13 T 14-10-2018 IPR001296 Glycosyl transferase, family 1 GYO_3350 16ec6292205d6187577a8dac39aab786 484 Hamap MF_00484 Glycogen synthase [glgA]. 1 475 46.413 T 14-10-2018 IPR011835 Bacterial/plant glycogen synthase GO:0004373 KEGG: 00500+2.4.1.21|MetaCyc: PWY-622 GYO_3350 16ec6292205d6187577a8dac39aab786 484 Gene3D G3DSA:3.40.50.2000 3 473 3.0E-180 T 14-10-2018 GYO_3350 16ec6292205d6187577a8dac39aab786 484 Pfam PF08323 Starch synthase catalytic domain 2 236 8.9E-86 T 14-10-2018 IPR013534 Starch synthase, catalytic domain KEGG: 00500+2.4.1.21|MetaCyc: PWY-622 GYO_3350 16ec6292205d6187577a8dac39aab786 484 TIGRFAM TIGR02095 glgA: glycogen/starch synthase, ADP-glucose type 2 474 1.1E-176 T 14-10-2018 IPR011835 Bacterial/plant glycogen synthase GO:0004373 KEGG: 00500+2.4.1.21|MetaCyc: PWY-622 GYO_3350 16ec6292205d6187577a8dac39aab786 484 Gene3D G3DSA:3.40.50.2000 250 459 3.0E-180 T 14-10-2018 GYO_3350 16ec6292205d6187577a8dac39aab786 484 SUPERFAMILY SSF53756 3 478 2.09E-128 T 14-10-2018 GYO_0652 dcaf2a7287c2ff225f4dbde90e7be590 574 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 196 321 4.3E-35 T 14-10-2018 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 GYO_0652 dcaf2a7287c2ff225f4dbde90e7be590 574 SUPERFAMILY SSF52518 2 179 2.8E-45 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold GYO_0652 dcaf2a7287c2ff225f4dbde90e7be590 574 ProSitePatterns PS00187 Thiamine pyrophosphate enzymes signature. 418 437 - T 14-10-2018 IPR000399 TPP-binding enzyme, conserved site GO:0000287|GO:0030976 GYO_0652 dcaf2a7287c2ff225f4dbde90e7be590 574 SUPERFAMILY SSF52518 358 558 1.3E-63 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold GYO_0652 dcaf2a7287c2ff225f4dbde90e7be590 574 Gene3D G3DSA:3.40.50.1220 184 335 1.3E-47 T 14-10-2018 GYO_0652 dcaf2a7287c2ff225f4dbde90e7be590 574 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 5 172 7.1E-48 T 14-10-2018 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 GYO_0652 dcaf2a7287c2ff225f4dbde90e7be590 574 Gene3D G3DSA:3.40.50.970 348 571 1.4E-63 T 14-10-2018 GYO_0652 dcaf2a7287c2ff225f4dbde90e7be590 574 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 381 527 1.3E-44 T 14-10-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 GYO_0652 dcaf2a7287c2ff225f4dbde90e7be590 574 Gene3D G3DSA:3.40.50.970 1 183 3.2E-59 T 14-10-2018 GYO_0652 dcaf2a7287c2ff225f4dbde90e7be590 574 SUPERFAMILY SSF52467 187 349 7.27E-45 T 14-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily GYO_2528 03331c06b709c06dd657f2598fec5945 424 Gene3D G3DSA:1.10.8.1210 20 42 4.5E-101 T 14-10-2018 GYO_2528 03331c06b709c06dd657f2598fec5945 424 SMART SM00839 193 422 8.0E-95 T 14-10-2018 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 GYO_2528 03331c06b709c06dd657f2598fec5945 424 Gene3D G3DSA:1.10.8.1210 378 424 2.3E-16 T 14-10-2018 GYO_2528 03331c06b709c06dd657f2598fec5945 424 Pfam PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase 191 422 1.1E-78 T 14-10-2018 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 GYO_2528 03331c06b709c06dd657f2598fec5945 424 Pfam PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain 45 173 8.4E-54 T 14-10-2018 IPR006097 Glutamate/phenylalanine/leucine/valine dehydrogenase, dimerisation domain GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 GYO_2528 03331c06b709c06dd657f2598fec5945 424 Gene3D G3DSA:3.40.50.10860 43 178 4.5E-101 T 14-10-2018 GYO_2528 03331c06b709c06dd657f2598fec5945 424 Gene3D G3DSA:3.40.50.720 198 351 4.4E-85 T 14-10-2018 GYO_2528 03331c06b709c06dd657f2598fec5945 424 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 182 204 1.0E-30 T 14-10-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 GYO_2528 03331c06b709c06dd657f2598fec5945 424 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 224 244 1.0E-30 T 14-10-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 GYO_2528 03331c06b709c06dd657f2598fec5945 424 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 102 116 1.0E-30 T 14-10-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 GYO_2528 03331c06b709c06dd657f2598fec5945 424 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 350 361 1.0E-30 T 14-10-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 GYO_2528 03331c06b709c06dd657f2598fec5945 424 PIRSF PIRSF000185 11 424 3.1E-171 T 14-10-2018 IPR014362 Glutamate dehydrogenase GO:0016639|GO:0055114 GYO_2528 03331c06b709c06dd657f2598fec5945 424 SUPERFAMILY SSF51735 191 423 8.78E-78 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily GYO_2528 03331c06b709c06dd657f2598fec5945 424 ProSitePatterns PS00074 Glu / Leu / Phe / Val dehydrogenases active site. 110 123 - T 14-10-2018 IPR033524 Leu/Phe/Val dehydrogenases active site Reactome: R-HSA-2151201|Reactome: R-HSA-70614 GYO_2528 03331c06b709c06dd657f2598fec5945 424 SUPERFAMILY SSF53223 16 193 2.11E-65 T 14-10-2018 GYO_3260 ae87443cbcf1cc53cbff6bb214798a90 370 SUPERFAMILY SSF48208 12 365 8.22E-76 T 14-10-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 GYO_3260 ae87443cbcf1cc53cbff6bb214798a90 370 Pfam PF07470 Glycosyl Hydrolase Family 88 14 364 2.8E-120 T 14-10-2018 IPR010905 Glycosyl hydrolase, family 88 GYO_3260 ae87443cbcf1cc53cbff6bb214798a90 370 Gene3D G3DSA:1.50.10.10 1 370 3.2E-156 T 14-10-2018 IPR012341 Six-hairpin glycosidase-like superfamily GO:0003824 GYO_1743 4ce2eb9bcc4bb9d86031a521e98286f1 407 Gene3D G3DSA:3.20.20.450 1 229 1.3E-75 T 14-10-2018 IPR035919 EAL domain superfamily GYO_1743 4ce2eb9bcc4bb9d86031a521e98286f1 407 SMART SM00052 1 241 5.4E-52 T 14-10-2018 IPR001633 EAL domain GYO_1743 4ce2eb9bcc4bb9d86031a521e98286f1 407 Gene3D G3DSA:3.30.450.20 292 407 2.1E-48 T 14-10-2018 GYO_1743 4ce2eb9bcc4bb9d86031a521e98286f1 407 SUPERFAMILY SSF141868 7 259 5.49E-43 T 14-10-2018 IPR035919 EAL domain superfamily GYO_1743 4ce2eb9bcc4bb9d86031a521e98286f1 407 Pfam PF00563 EAL domain 13 236 8.4E-30 T 14-10-2018 IPR001633 EAL domain GYO_1743 4ce2eb9bcc4bb9d86031a521e98286f1 407 Gene3D G3DSA:1.20.5.170 246 291 5.9E-30 T 14-10-2018 GYO_1743 4ce2eb9bcc4bb9d86031a521e98286f1 407 SUPERFAMILY SSF103190 263 405 2.2E-46 T 14-10-2018 IPR029151 Periplasmic sensor-like domain superfamily GYO_1743 4ce2eb9bcc4bb9d86031a521e98286f1 407 Pfam PF10388 EAL-domain associated signalling protein domain 240 407 6.5E-78 T 14-10-2018 IPR018842 YkuI, C-terminal GYO_4192 06b6cf81de92a28afb393822926da2d8 232 Pfam PF08543 Phosphomethylpyrimidine kinase 8 221 5.2E-71 T 14-10-2018 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase Reactome: R-HSA-6798695|Reactome: R-HSA-964975 GYO_4192 06b6cf81de92a28afb393822926da2d8 232 Gene3D G3DSA:3.40.1190.20 1 232 5.0E-76 T 14-10-2018 IPR029056 Ribokinase-like GYO_4192 06b6cf81de92a28afb393822926da2d8 232 SUPERFAMILY SSF53613 13 226 8.11E-61 T 14-10-2018 IPR029056 Ribokinase-like GYO_4192 06b6cf81de92a28afb393822926da2d8 232 TIGRFAM TIGR00097 HMP-P_kinase: hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase 2 223 2.7E-67 T 14-10-2018 IPR004399 Hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase GO:0008972|GO:0009228 KEGG: 00730+2.7.1.49|MetaCyc: PWY-6910|MetaCyc: PWY-7356|MetaCyc: PWY-7357 GYO_0036 964062f6a832f5cfa5659d2b405cd275 480 SUPERFAMILY SSF55904 334 463 5.49E-21 T 14-10-2018 IPR036633 Orn/Lys/Arg decarboxylase, C-terminal domain superfamily GO:0003824 GYO_0036 964062f6a832f5cfa5659d2b405cd275 480 Gene3D G3DSA:3.90.1150.150 277 361 2.6E-114 T 14-10-2018 GYO_0036 964062f6a832f5cfa5659d2b405cd275 480 Pfam PF01276 Orn/Lys/Arg decarboxylase, major domain 3 362 6.4E-119 T 14-10-2018 IPR000310 Orn/Lys/Arg decarboxylase, major domain GO:0003824 GYO_0036 964062f6a832f5cfa5659d2b405cd275 480 Pfam PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain 408 451 1.3E-10 T 14-10-2018 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal GO:0003824 GYO_0036 964062f6a832f5cfa5659d2b405cd275 480 Gene3D G3DSA:3.90.105.10 411 467 6.6E-18 T 14-10-2018 GYO_0036 964062f6a832f5cfa5659d2b405cd275 480 Gene3D G3DSA:3.40.640.10 45 276 2.6E-114 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 GYO_0036 964062f6a832f5cfa5659d2b405cd275 480 SUPERFAMILY SSF53383 3 368 4.71E-82 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase GYO_3450 5e5436e96031c329f4f12d23e605676f 801 Pfam PF00361 Proton-conducting membrane transporter 130 420 4.5E-67 T 14-10-2018 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 GYO_3450 5e5436e96031c329f4f12d23e605676f 801 Pfam PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus 61 116 2.6E-11 T 14-10-2018 IPR001516 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminal Reactome: R-HSA-611105|Reactome: R-HSA-6799198 GYO_3450 5e5436e96031c329f4f12d23e605676f 801 TIGRFAM TIGR00940 2a6301s01: monovalent cation:proton antiporter 4 793 0.0 T 14-10-2018 IPR005663 Monovalent cation proton antiporter subunit A GO:0015077|GO:0030004 GYO_3450 5e5436e96031c329f4f12d23e605676f 801 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 106 126 2.2E-42 T 14-10-2018 GYO_3450 5e5436e96031c329f4f12d23e605676f 801 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 434 453 2.2E-42 T 14-10-2018 GYO_3450 5e5436e96031c329f4f12d23e605676f 801 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 309 321 2.2E-42 T 14-10-2018 GYO_3450 5e5436e96031c329f4f12d23e605676f 801 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 219 240 2.2E-42 T 14-10-2018 GYO_3450 5e5436e96031c329f4f12d23e605676f 801 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 241 267 2.2E-42 T 14-10-2018 GYO_3450 5e5436e96031c329f4f12d23e605676f 801 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 153 174 2.2E-42 T 14-10-2018 GYO_3450 5e5436e96031c329f4f12d23e605676f 801 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 77 102 2.2E-42 T 14-10-2018 GYO_3450 5e5436e96031c329f4f12d23e605676f 801 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 79 99 8.4E-6 T 14-10-2018 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 GYO_3450 5e5436e96031c329f4f12d23e605676f 801 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 259 281 8.4E-6 T 14-10-2018 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 GYO_3450 5e5436e96031c329f4f12d23e605676f 801 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 365 387 8.4E-6 T 14-10-2018 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 GYO_3450 5e5436e96031c329f4f12d23e605676f 801 Pfam PF13244 Domain of unknown function (DUF4040) 635 700 7.0E-22 T 14-10-2018 IPR025383 Domain of unknown function DUF4040 GYO_0924 5d2d0e048f601079bc1dd104722cce9c 668 SMART SM00532 5 443 5.2E-301 T 14-10-2018 IPR013840 NAD-dependent DNA ligase, N-terminal GO:0003911 GYO_0924 5d2d0e048f601079bc1dd104722cce9c 668 Pfam PF03120 NAD-dependent DNA ligase OB-fold domain 318 394 1.9E-33 T 14-10-2018 IPR004150 NAD-dependent DNA ligase, OB-fold GO:0003911|GO:0006260|GO:0006281 GYO_0924 5d2d0e048f601079bc1dd104722cce9c 668 SMART SM00278 539 558 1.7 T 14-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 GYO_0924 5d2d0e048f601079bc1dd104722cce9c 668 SMART SM00278 475 494 84.0 T 14-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 GYO_0924 5d2d0e048f601079bc1dd104722cce9c 668 SMART SM00278 441 460 140.0 T 14-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 GYO_0924 5d2d0e048f601079bc1dd104722cce9c 668 Gene3D G3DSA:3.30.470.90 73 313 8.5E-104 T 14-10-2018 GYO_0924 5d2d0e048f601079bc1dd104722cce9c 668 Gene3D G3DSA:3.40.50.10190 579 667 9.4E-26 T 14-10-2018 IPR036420 BRCT domain superfamily GYO_0924 5d2d0e048f601079bc1dd104722cce9c 668 SMART SM00292 592 668 1.8E-10 T 14-10-2018 IPR001357 BRCT domain GYO_0924 5d2d0e048f601079bc1dd104722cce9c 668 SUPERFAMILY SSF47781 400 579 9.64E-66 T 14-10-2018 IPR010994 RuvA domain 2-like GYO_0924 5d2d0e048f601079bc1dd104722cce9c 668 Hamap MF_01588 DNA ligase [ligA]. 4 666 54.451 T 14-10-2018 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 GYO_0924 5d2d0e048f601079bc1dd104722cce9c 668 TIGRFAM TIGR00575 dnlj: DNA ligase, NAD-dependent 13 662 5.0E-288 T 14-10-2018 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 GYO_0924 5d2d0e048f601079bc1dd104722cce9c 668 Pfam PF01653 NAD-dependent DNA ligase adenylation domain 5 314 2.4E-139 T 14-10-2018 IPR013839 NAD-dependent DNA ligase, adenylation GO:0003911 GYO_0924 5d2d0e048f601079bc1dd104722cce9c 668 SUPERFAMILY SSF50249 313 396 3.94E-27 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold GYO_0924 5d2d0e048f601079bc1dd104722cce9c 668 PIRSF PIRSF001604 1 668 1.0E-264 T 14-10-2018 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 GYO_0924 5d2d0e048f601079bc1dd104722cce9c 668 Gene3D G3DSA:1.10.150.20 427 499 5.3E-31 T 14-10-2018 GYO_0924 5d2d0e048f601079bc1dd104722cce9c 668 Pfam PF00533 BRCA1 C Terminus (BRCT) domain 593 662 1.8E-13 T 14-10-2018 IPR001357 BRCT domain GYO_0924 5d2d0e048f601079bc1dd104722cce9c 668 SUPERFAMILY SSF56091 2 312 1.6E-124 T 14-10-2018 GYO_0924 5d2d0e048f601079bc1dd104722cce9c 668 Gene3D G3DSA:2.40.50.140 314 386 4.2E-30 T 14-10-2018 GYO_0924 5d2d0e048f601079bc1dd104722cce9c 668 Gene3D G3DSA:1.10.287.610 1 72 5.9E-30 T 14-10-2018 GYO_0924 5d2d0e048f601079bc1dd104722cce9c 668 Gene3D G3DSA:2.20.70.80 387 424 1.7E-12 T 14-10-2018 GYO_0924 5d2d0e048f601079bc1dd104722cce9c 668 Gene3D G3DSA:1.10.150.20 500 578 5.3E-26 T 14-10-2018 GYO_0924 5d2d0e048f601079bc1dd104722cce9c 668 Pfam PF03119 NAD-dependent DNA ligase C4 zinc finger domain 403 429 8.9E-11 T 14-10-2018 IPR004149 Zinc-finger, NAD-dependent DNA ligase C4-type GO:0003911|GO:0006260|GO:0006281 GYO_0924 5d2d0e048f601079bc1dd104722cce9c 668 Pfam PF14520 Helix-hairpin-helix domain 443 497 5.0E-4 T 14-10-2018 GYO_0924 5d2d0e048f601079bc1dd104722cce9c 668 Pfam PF12826 Helix-hairpin-helix motif 505 567 9.9E-25 T 14-10-2018 GYO_0924 5d2d0e048f601079bc1dd104722cce9c 668 ProSitePatterns PS01055 NAD-dependent DNA ligase signature 1. 115 144 - T 14-10-2018 IPR018239 NAD-dependent DNA ligase, active site GYO_0924 5d2d0e048f601079bc1dd104722cce9c 668 SUPERFAMILY SSF52113 589 665 1.05E-19 T 14-10-2018 IPR036420 BRCT domain superfamily GYO_0924 5d2d0e048f601079bc1dd104722cce9c 668 ProSitePatterns PS01056 NAD-dependent DNA ligase signature 2. 327 342 - T 14-10-2018 IPR033136 NAD-dependent DNA ligase, conserved site GYO_2513 e06fa7f99cf735dbf24f308b1081ab2d 436 TIGRFAM TIGR03594 GTPase_EngA: ribosome-associated GTPase EngA 4 432 3.3E-180 T 14-10-2018 IPR016484 GTP-binding protein EngA GO:0005525 GYO_2513 e06fa7f99cf735dbf24f308b1081ab2d 436 SUPERFAMILY SSF52540 138 434 1.24E-69 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase GYO_2513 e06fa7f99cf735dbf24f308b1081ab2d 436 Gene3D G3DSA:3.40.50.300 1 163 2.6E-47 T 14-10-2018 GYO_2513 e06fa7f99cf735dbf24f308b1081ab2d 436 PIRSF PIRSF006485 2 436 8.5E-176 T 14-10-2018 IPR016484 GTP-binding protein EngA GO:0005525 GYO_2513 e06fa7f99cf735dbf24f308b1081ab2d 436 Pfam PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal 353 433 2.5E-35 T 14-10-2018 IPR032859 GTPase Der, C-terminal KH-domain-like GYO_2513 e06fa7f99cf735dbf24f308b1081ab2d 436 Gene3D G3DSA:3.40.50.300 169 352 3.3E-55 T 14-10-2018 GYO_2513 e06fa7f99cf735dbf24f308b1081ab2d 436 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 179 338 7.1E-25 T 14-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 GYO_2513 e06fa7f99cf735dbf24f308b1081ab2d 436 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 3 125 4.8E-23 T 14-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 GYO_2513 e06fa7f99cf735dbf24f308b1081ab2d 436 Pfam PF01926 50S ribosome-binding GTPase 178 295 2.8E-25 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 GYO_2513 e06fa7f99cf735dbf24f308b1081ab2d 436 Pfam PF01926 50S ribosome-binding GTPase 6 120 7.0E-26 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 GYO_2513 e06fa7f99cf735dbf24f308b1081ab2d 436 SUPERFAMILY SSF52540 5 167 3.36E-45 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase GYO_2513 e06fa7f99cf735dbf24f308b1081ab2d 436 Gene3D G3DSA:3.30.300.20 353 436 5.1E-37 T 14-10-2018 IPR015946 K homology domain-like, alpha/beta GYO_2513 e06fa7f99cf735dbf24f308b1081ab2d 436 Hamap MF_00195 GTPase Der [der]. 3 436 41.164 T 14-10-2018 IPR016484 GTP-binding protein EngA GO:0005525 GYO_0067 64566159ad0811a893533d3927ca486a 178 Gene3D G3DSA:3.30.450.40 56 178 6.6E-49 T 14-10-2018 IPR029016 GAF-like domain superfamily GYO_0067 64566159ad0811a893533d3927ca486a 178 TIGRFAM TIGR02851 spore_V_T: stage V sporulation protein T 2 177 2.2E-89 T 14-10-2018 IPR014213 Sporulation stage V, protein T GYO_0067 64566159ad0811a893533d3927ca486a 178 Pfam PF15714 Stage V sporulation protein T C-terminal, transcription factor 54 177 1.9E-45 T 14-10-2018 IPR039472 Sporulation stage V protein T, GAF domain GYO_0067 64566159ad0811a893533d3927ca486a 178 Pfam PF04014 Antidote-toxin recognition MazE, bacterial antitoxin 9 51 1.1E-10 T 14-10-2018 IPR007159 SpoVT-AbrB domain GO:0003677 GYO_0067 64566159ad0811a893533d3927ca486a 178 TIGRFAM TIGR01439 lp_hng_hel_AbrB: transcriptional regulator, AbrB family 8 49 1.2E-15 T 14-10-2018 IPR007159 SpoVT-AbrB domain GO:0003677 GYO_0067 64566159ad0811a893533d3927ca486a 178 SMART SM00966 8 52 1.1E-10 T 14-10-2018 IPR007159 SpoVT-AbrB domain GO:0003677 GYO_0067 64566159ad0811a893533d3927ca486a 178 PIRSF PIRSF026579 1 178 1.8E-97 T 14-10-2018 IPR014213 Sporulation stage V, protein T GYO_0067 64566159ad0811a893533d3927ca486a 178 SUPERFAMILY SSF89447 1 52 9.03E-15 T 14-10-2018 IPR037914 SpoVT-AbrB domain superfamily GYO_0067 64566159ad0811a893533d3927ca486a 178 Gene3D G3DSA:2.10.260.10 1 49 3.8E-24 T 14-10-2018 GYO_1040 c28fccd66e49c2636eacba38a90c5cbe 471 Pfam PF01235 Sodium:alanine symporter family 56 447 1.8E-127 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 GYO_1040 c28fccd66e49c2636eacba38a90c5cbe 471 TIGRFAM TIGR00835 agcS: amino acid carrier protein 16 442 4.5E-137 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 GYO_1040 c28fccd66e49c2636eacba38a90c5cbe 471 PRINTS PR00175 Sodium/alanine symporter signature 353 375 1.1E-50 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 GYO_1040 c28fccd66e49c2636eacba38a90c5cbe 471 PRINTS PR00175 Sodium/alanine symporter signature 93 115 1.1E-50 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 GYO_1040 c28fccd66e49c2636eacba38a90c5cbe 471 PRINTS PR00175 Sodium/alanine symporter signature 306 324 1.1E-50 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 GYO_1040 c28fccd66e49c2636eacba38a90c5cbe 471 PRINTS PR00175 Sodium/alanine symporter signature 412 432 1.1E-50 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 GYO_1040 c28fccd66e49c2636eacba38a90c5cbe 471 PRINTS PR00175 Sodium/alanine symporter signature 211 230 1.1E-50 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 GYO_1040 c28fccd66e49c2636eacba38a90c5cbe 471 PRINTS PR00175 Sodium/alanine symporter signature 183 201 1.1E-50 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 GYO_1121 51c753478b907ec7f88f12edff89feea 104 Gene3D G3DSA:2.30.30.340 51 104 5.1E-27 T 14-10-2018 GYO_1121 51c753478b907ec7f88f12edff89feea 104 SUPERFAMILY SSF101697 1 103 2.09E-49 T 14-10-2018 IPR036289 Hypothetical protein YfhH GYO_1121 51c753478b907ec7f88f12edff89feea 104 Pfam PF08838 Protein of unknown function (DUF1811) 3 101 2.9E-44 T 14-10-2018 IPR014938 Protein of unknown function DUF1811 GYO_1121 51c753478b907ec7f88f12edff89feea 104 Gene3D G3DSA:1.10.287.880 1 50 2.8E-27 T 14-10-2018 GYO_1291 9b14fa1a0fc684cdd7f67646eea731d3 113 ProDom PD073069 YHAI 3D-STRUCTURE 10 113 4.0E-53 T 14-10-2018 IPR015058 Protein of unknown function DUF1878 GYO_1291 9b14fa1a0fc684cdd7f67646eea731d3 113 SUPERFAMILY SSF109915 2 113 1.96E-51 T 14-10-2018 IPR035945 YhaI-like superfamily GYO_1291 9b14fa1a0fc684cdd7f67646eea731d3 113 Pfam PF08963 Protein of unknown function (DUF1878) 1 110 4.1E-47 T 14-10-2018 IPR015058 Protein of unknown function DUF1878 GYO_1291 9b14fa1a0fc684cdd7f67646eea731d3 113 Gene3D G3DSA:1.10.3750.10 1 113 1.2E-46 T 14-10-2018 IPR035945 YhaI-like superfamily GYO_1327 b78bcfd9d42c950729ca346177fe796d 426 Gene3D G3DSA:3.30.2010.10 203 285 2.1E-26 T 14-10-2018 GYO_1327 b78bcfd9d42c950729ca346177fe796d 426 Pfam PF16491 CAAX prenyl protease N-terminal, five membrane helices 44 203 2.6E-17 T 14-10-2018 IPR032456 CAAX prenyl protease 1, N-terminal KEGG: 00900+3.4.24.84 GYO_1327 b78bcfd9d42c950729ca346177fe796d 426 Pfam PF01435 Peptidase family M48 207 415 2.0E-45 T 14-10-2018 IPR001915 Peptidase M48 GO:0004222|GO:0006508 GYO_0014 33b2888d433de491988601b80e7524e2 443 Pfam PF07943 Penicillin-binding protein 5, C-terminal domain 310 413 1.1E-23 T 14-10-2018 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 GYO_0014 33b2888d433de491988601b80e7524e2 443 Gene3D G3DSA:2.60.410.10 311 413 2.3E-24 T 14-10-2018 IPR037167 D-Ala-D-Ala carboxypeptidase, C-terminal domain superfamily GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 GYO_0014 33b2888d433de491988601b80e7524e2 443 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 150 163 2.4E-16 T 14-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 GYO_0014 33b2888d433de491988601b80e7524e2 443 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 123 140 2.4E-16 T 14-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 GYO_0014 33b2888d433de491988601b80e7524e2 443 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 66 77 2.4E-16 T 14-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 GYO_0014 33b2888d433de491988601b80e7524e2 443 SMART SM00936 310 413 2.0E-27 T 14-10-2018 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 GYO_0014 33b2888d433de491988601b80e7524e2 443 Gene3D G3DSA:3.40.710.10 28 310 4.2E-89 T 14-10-2018 GYO_0014 33b2888d433de491988601b80e7524e2 443 SUPERFAMILY SSF69189 302 411 3.92E-21 T 14-10-2018 IPR015956 Penicillin-binding protein, C-terminal domain superfamily GO:0004180|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 GYO_0014 33b2888d433de491988601b80e7524e2 443 Pfam PF00768 D-alanyl-D-alanine carboxypeptidase 29 288 5.8E-87 T 14-10-2018 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal GO:0006508|GO:0009002 GYO_0014 33b2888d433de491988601b80e7524e2 443 SUPERFAMILY SSF56601 12 310 5.5E-77 T 14-10-2018 IPR012338 Beta-lactamase/transpeptidase-like GYO_1863 d59560bd770e2f988c5c07bd984d1219 646 Gene3D G3DSA:3.40.710.10 283 478 8.1E-112 T 14-10-2018 GYO_1863 d59560bd770e2f988c5c07bd984d1219 646 SMART SM00740 580 638 1.7E-15 T 14-10-2018 IPR005543 PASTA domain GYO_1863 d59560bd770e2f988c5c07bd984d1219 646 TIGRFAM TIGR02214 spoVD_pbp: stage V sporulation protein D 11 637 8.6E-269 T 14-10-2018 IPR011927 Stage V sporulation protein D GYO_1863 d59560bd770e2f988c5c07bd984d1219 646 Gene3D G3DSA:3.90.1310.30 49 220 2.1E-45 T 14-10-2018 GYO_1863 d59560bd770e2f988c5c07bd984d1219 646 Pfam PF03717 Penicillin-binding Protein dimerisation domain 56 201 1.9E-23 T 14-10-2018 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 GYO_1863 d59560bd770e2f988c5c07bd984d1219 646 Gene3D G3DSA:3.30.10.20 579 637 2.8E-9 T 14-10-2018 GYO_1863 d59560bd770e2f988c5c07bd984d1219 646 Pfam PF03793 PASTA domain 584 637 3.9E-13 T 14-10-2018 IPR005543 PASTA domain GYO_1863 d59560bd770e2f988c5c07bd984d1219 646 Gene3D G3DSA:3.30.450.330 222 560 8.1E-112 T 14-10-2018 GYO_1863 d59560bd770e2f988c5c07bd984d1219 646 SUPERFAMILY SSF54184 584 637 5.1E-11 T 14-10-2018 GYO_1863 d59560bd770e2f988c5c07bd984d1219 646 Pfam PF00905 Penicillin binding protein transpeptidase domain 246 556 2.4E-89 T 14-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 GYO_1863 d59560bd770e2f988c5c07bd984d1219 646 SUPERFAMILY SSF56519 52 220 3.66E-44 T 14-10-2018 IPR036138 Penicillin-binding protein, dimerisation domain superfamily GO:0008658 GYO_1863 d59560bd770e2f988c5c07bd984d1219 646 SUPERFAMILY SSF56601 171 585 1.2E-101 T 14-10-2018 IPR012338 Beta-lactamase/transpeptidase-like GYO_3059 8ab125de4f4ccb18fc8e30f761cc2395 313 Gene3D G3DSA:3.40.190.10 4 209 6.8E-87 T 14-10-2018 GYO_3059 8ab125de4f4ccb18fc8e30f761cc2395 313 Gene3D G3DSA:3.40.190.10 101 201 6.8E-87 T 14-10-2018 GYO_3059 8ab125de4f4ccb18fc8e30f761cc2395 313 PRINTS PR00151 Porphobilinogen deaminase signature 122 139 2.3E-49 T 14-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 GYO_3059 8ab125de4f4ccb18fc8e30f761cc2395 313 PRINTS PR00151 Porphobilinogen deaminase signature 141 158 2.3E-49 T 14-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 GYO_3059 8ab125de4f4ccb18fc8e30f761cc2395 313 PRINTS PR00151 Porphobilinogen deaminase signature 229 246 2.3E-49 T 14-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 GYO_3059 8ab125de4f4ccb18fc8e30f761cc2395 313 PRINTS PR00151 Porphobilinogen deaminase signature 74 93 2.3E-49 T 14-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 GYO_3059 8ab125de4f4ccb18fc8e30f761cc2395 313 PRINTS PR00151 Porphobilinogen deaminase signature 43 63 2.3E-49 T 14-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 GYO_3059 8ab125de4f4ccb18fc8e30f761cc2395 313 Hamap MF_00260 Porphobilinogen deaminase [hemC]. 3 295 39.207 T 14-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 GYO_3059 8ab125de4f4ccb18fc8e30f761cc2395 313 Pfam PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain 4 211 8.6E-82 T 14-10-2018 IPR022417 Porphobilinogen deaminase, N-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 GYO_3059 8ab125de4f4ccb18fc8e30f761cc2395 313 SUPERFAMILY SSF54782 220 309 3.53E-22 T 14-10-2018 IPR036803 Porphobilinogen deaminase, C-terminal domain superfamily GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 GYO_3059 8ab125de4f4ccb18fc8e30f761cc2395 313 SUPERFAMILY SSF53850 2 216 1.15E-82 T 14-10-2018 GYO_3059 8ab125de4f4ccb18fc8e30f761cc2395 313 PIRSF PIRSF001438 1 310 4.9E-123 T 14-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 GYO_3059 8ab125de4f4ccb18fc8e30f761cc2395 313 Gene3D G3DSA:3.30.160.40 220 304 1.7E-26 T 14-10-2018 IPR036803 Porphobilinogen deaminase, C-terminal domain superfamily GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 GYO_3059 8ab125de4f4ccb18fc8e30f761cc2395 313 TIGRFAM TIGR00212 hemC: hydroxymethylbilane synthase 4 295 9.6E-110 T 14-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 GYO_3059 8ab125de4f4ccb18fc8e30f761cc2395 313 Pfam PF03900 Porphobilinogen deaminase, C-terminal domain 226 293 1.2E-21 T 14-10-2018 IPR022418 Porphobilinogen deaminase, C-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 GYO_2344 cb5b6d6d80eaaaa8e66854e03348ea89 405 Gene3D G3DSA:3.40.50.2000 218 381 1.1E-117 T 14-10-2018 GYO_2344 cb5b6d6d80eaaaa8e66854e03348ea89 405 Pfam PF00201 UDP-glucoronosyl and UDP-glucosyl transferase 277 372 3.6E-13 T 14-10-2018 IPR002213 UDP-glucuronosyl/UDP-glucosyltransferase GO:0016758 Reactome: R-HSA-156588 GYO_2344 cb5b6d6d80eaaaa8e66854e03348ea89 405 SUPERFAMILY SSF53756 1 396 8.48E-70 T 14-10-2018 GYO_2344 cb5b6d6d80eaaaa8e66854e03348ea89 405 Gene3D G3DSA:3.40.50.2000 5 392 1.1E-117 T 14-10-2018 GYO_2344 cb5b6d6d80eaaaa8e66854e03348ea89 405 TIGRFAM TIGR01426 MGT: glycosyltransferase, MGT family 8 396 1.8E-106 T 14-10-2018 IPR006326 UDP-glycosyltransferase, MGT GO:0016758|GO:0016999 GYO_4131 4f162dc293c705cadad7b9ea8eb7f159 215 SUPERFAMILY SSF52540 4 210 4.93E-50 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase GYO_4131 4f162dc293c705cadad7b9ea8eb7f159 215 Pfam PF00005 ABC transporter 20 160 6.8E-28 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 GYO_4131 4f162dc293c705cadad7b9ea8eb7f159 215 SMART SM00382 29 209 8.6E-14 T 14-10-2018 IPR003593 AAA+ ATPase domain GYO_4131 4f162dc293c705cadad7b9ea8eb7f159 215 ProSitePatterns PS00211 ABC transporters family signature. 132 146 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 GYO_4131 4f162dc293c705cadad7b9ea8eb7f159 215 Gene3D G3DSA:3.40.50.300 1 215 6.7E-53 T 14-10-2018 GYO_0678 119af136fe130a8952b0be30eeac8734 457 SUPERFAMILY SSF53623 107 309 3.01E-56 T 14-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 GYO_0678 119af136fe130a8952b0be30eeac8734 457 Gene3D G3DSA:3.90.190.20 311 455 3.6E-43 T 14-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 GYO_0678 119af136fe130a8952b0be30eeac8734 457 Gene3D G3DSA:3.40.1190.10 87 308 5.1E-71 T 14-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 GYO_0678 119af136fe130a8952b0be30eeac8734 457 TIGRFAM TIGR01143 murF: UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase 32 451 3.6E-146 T 14-10-2018 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase GO:0005524|GO:0005737|GO:0047480|GO:0071555 KEGG: 00300+6.3.2.10|KEGG: 00550+6.3.2.10|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 GYO_0678 119af136fe130a8952b0be30eeac8734 457 Pfam PF08245 Mur ligase middle domain 111 291 1.8E-51 T 14-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 GYO_0678 119af136fe130a8952b0be30eeac8734 457 SUPERFAMILY SSF63418 3 102 1.18E-23 T 14-10-2018 IPR035911 MurE/MurF, N-terminal GYO_0678 119af136fe130a8952b0be30eeac8734 457 Gene3D G3DSA:3.40.1390.10 2 82 9.3E-21 T 14-10-2018 GYO_0678 119af136fe130a8952b0be30eeac8734 457 SUPERFAMILY SSF53244 313 451 4.58E-35 T 14-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 GYO_0678 119af136fe130a8952b0be30eeac8734 457 Hamap MF_02019 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [murF]. 4 452 34.58 T 14-10-2018 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase GO:0005524|GO:0005737|GO:0047480|GO:0071555 KEGG: 00300+6.3.2.10|KEGG: 00550+6.3.2.10|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 GYO_0678 119af136fe130a8952b0be30eeac8734 457 Pfam PF02875 Mur ligase family, glutamate ligase domain 314 392 3.3E-15 T 14-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 GYO_0678 119af136fe130a8952b0be30eeac8734 457 Pfam PF01225 Mur ligase family, catalytic domain 27 100 2.3E-11 T 14-10-2018 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 GYO_4385 aea622993d6d78f5e30af2983bc34314 310 Gene3D G3DSA:3.20.20.100 1 310 1.3E-131 T 14-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily GYO_4385 aea622993d6d78f5e30af2983bc34314 310 PRINTS PR00069 Aldo-keto reductase signature 140 157 2.1E-12 T 14-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 GYO_4385 aea622993d6d78f5e30af2983bc34314 310 PRINTS PR00069 Aldo-keto reductase signature 109 127 2.1E-12 T 14-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 GYO_4385 aea622993d6d78f5e30af2983bc34314 310 PRINTS PR00069 Aldo-keto reductase signature 44 68 2.1E-12 T 14-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 GYO_4385 aea622993d6d78f5e30af2983bc34314 310 Pfam PF00248 Aldo/keto reductase family 15 308 1.9E-75 T 14-10-2018 IPR023210 NADP-dependent oxidoreductase domain GYO_4385 aea622993d6d78f5e30af2983bc34314 310 SUPERFAMILY SSF51430 1 309 2.88E-97 T 14-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily GYO_4385 aea622993d6d78f5e30af2983bc34314 310 ProSitePatterns PS00062 Aldo/keto reductase family signature 2. 140 157 - T 14-10-2018 IPR018170 Aldo/keto reductase, conserved site GO:0016491|GO:0055114 GYO_2838 29a5e67a06cdcd33c59f2d8b0255003a 172 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 61 129 3.1E-7 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 GYO_2838 29a5e67a06cdcd33c59f2d8b0255003a 172 TIGRFAM TIGR01668 YqeG_hyp_ppase: HAD phosphatase, family IIIA 4 169 2.6E-69 T 14-10-2018 IPR010021 HAD-superfamily phosphatase, YqeG-like GYO_2838 29a5e67a06cdcd33c59f2d8b0255003a 172 Pfam PF13419 Haloacid dehalogenase-like hydrolase 24 137 9.8E-11 T 14-10-2018 GYO_2838 29a5e67a06cdcd33c59f2d8b0255003a 172 Gene3D G3DSA:3.40.50.1000 18 155 7.4E-23 T 14-10-2018 IPR023214 HAD superfamily GYO_2838 29a5e67a06cdcd33c59f2d8b0255003a 172 TIGRFAM TIGR01662 HAD-SF-IIIA: HAD hydrolase, family IIIA 29 139 8.5E-25 T 14-10-2018 IPR006549 HAD-superfamily hydrolase,subfamily IIIA Reactome: R-HSA-5649702 GYO_2838 29a5e67a06cdcd33c59f2d8b0255003a 172 SUPERFAMILY SSF56784 16 151 6.46E-25 T 14-10-2018 IPR036412 HAD-like superfamily GYO_2464 603553dc1f604d3a5f449139a323945f 161 SUPERFAMILY SSF54403 99 160 2.89E-15 T 14-10-2018 GYO_2464 603553dc1f604d3a5f449139a323945f 161 Pfam PF03413 Peptidase propeptide and YPEB domain 100 158 8.3E-6 T 14-10-2018 IPR025711 PepSY domain GYO_2464 603553dc1f604d3a5f449139a323945f 161 Gene3D G3DSA:3.10.450.40 99 161 3.3E-29 T 14-10-2018 GYO_2464 603553dc1f604d3a5f449139a323945f 161 Gene3D G3DSA:3.10.450.40 27 98 6.2E-32 T 14-10-2018 GYO_2464 603553dc1f604d3a5f449139a323945f 161 SUPERFAMILY SSF54403 35 93 5.36E-15 T 14-10-2018 GYO_3331 f363d74e4299b22fe109e22d4c99cff3 306 Gene3D G3DSA:3.40.50.1980 176 306 1.1E-49 T 14-10-2018 GYO_3331 f363d74e4299b22fe109e22d4c99cff3 306 SUPERFAMILY SSF53807 31 306 4.91E-81 T 14-10-2018 GYO_3331 f363d74e4299b22fe109e22d4c99cff3 306 PRINTS PR00690 Adhesin family signature 187 208 4.4E-42 T 14-10-2018 IPR006128 Adhesion lipoprotein GO:0007155 GYO_3331 f363d74e4299b22fe109e22d4c99cff3 306 PRINTS PR00690 Adhesin family signature 75 92 4.4E-42 T 14-10-2018 IPR006128 Adhesion lipoprotein GO:0007155 GYO_3331 f363d74e4299b22fe109e22d4c99cff3 306 PRINTS PR00690 Adhesin family signature 271 290 4.4E-42 T 14-10-2018 IPR006128 Adhesion lipoprotein GO:0007155 GYO_3331 f363d74e4299b22fe109e22d4c99cff3 306 PRINTS PR00690 Adhesin family signature 62 75 4.4E-42 T 14-10-2018 IPR006128 Adhesion lipoprotein GO:0007155 GYO_3331 f363d74e4299b22fe109e22d4c99cff3 306 PRINTS PR00690 Adhesin family signature 31 49 4.4E-42 T 14-10-2018 IPR006128 Adhesion lipoprotein GO:0007155 GYO_3331 f363d74e4299b22fe109e22d4c99cff3 306 PRINTS PR00690 Adhesin family signature 240 258 4.4E-42 T 14-10-2018 IPR006128 Adhesion lipoprotein GO:0007155 GYO_3331 f363d74e4299b22fe109e22d4c99cff3 306 PRINTS PR00691 Adhesin B signature 187 204 6.1E-20 T 14-10-2018 IPR006129 Adhesin B GO:0007155 GYO_3331 f363d74e4299b22fe109e22d4c99cff3 306 PRINTS PR00691 Adhesin B signature 56 74 6.1E-20 T 14-10-2018 IPR006129 Adhesin B GO:0007155 GYO_3331 f363d74e4299b22fe109e22d4c99cff3 306 PRINTS PR00691 Adhesin B signature 75 94 6.1E-20 T 14-10-2018 IPR006129 Adhesin B GO:0007155 GYO_3331 f363d74e4299b22fe109e22d4c99cff3 306 PRINTS PR00691 Adhesin B signature 31 52 6.1E-20 T 14-10-2018 IPR006129 Adhesin B GO:0007155 GYO_3331 f363d74e4299b22fe109e22d4c99cff3 306 PRINTS PR00691 Adhesin B signature 284 302 6.1E-20 T 14-10-2018 IPR006129 Adhesin B GO:0007155 GYO_3331 f363d74e4299b22fe109e22d4c99cff3 306 PRINTS PR00691 Adhesin B signature 263 281 6.1E-20 T 14-10-2018 IPR006129 Adhesin B GO:0007155 GYO_3331 f363d74e4299b22fe109e22d4c99cff3 306 Pfam PF01297 Zinc-uptake complex component A periplasmic 34 304 1.5E-72 T 14-10-2018 IPR006127 Periplasmic solute binding protein, ZnuA-like GO:0030001|GO:0046872 GYO_3331 f363d74e4299b22fe109e22d4c99cff3 306 Gene3D G3DSA:3.40.50.1980 30 173 8.4E-45 T 14-10-2018 GYO_2366 3e70a4c53a40a3a9e7b034d353b297c5 83 ProDom PD710533 YODI TRANSMEMBRANE MEMBRANE 2 43 4.0E-16 T 14-10-2018 GYO_2381 dd1395be0a43ade2e40530a355822ea1 229 SMART SM00882 7 219 7.9E-72 T 14-10-2018 IPR004165 Coenzyme A transferase family I GO:0008410 Reactome: R-HSA-77108 GYO_2381 dd1395be0a43ade2e40530a355822ea1 229 SUPERFAMILY SSF100950 6 221 1.19E-69 T 14-10-2018 IPR037171 NagB/RpiA transferase-like GYO_2381 dd1395be0a43ade2e40530a355822ea1 229 ProSitePatterns PS01273 Coenzyme A transferases signature 1. 19 34 - T 14-10-2018 IPR004163 Coenzyme A transferase binding site GO:0008410 Reactome: R-HSA-77108 GYO_2381 dd1395be0a43ade2e40530a355822ea1 229 Pfam PF01144 Coenzyme A transferase 9 218 8.9E-69 T 14-10-2018 IPR004165 Coenzyme A transferase family I GO:0008410 Reactome: R-HSA-77108 GYO_2381 dd1395be0a43ade2e40530a355822ea1 229 TIGRFAM TIGR02429 pcaI_scoA_fam: 3-oxoacid CoA-transferase, A subunit 8 220 2.6E-66 T 14-10-2018 IPR012792 3-oxoacid CoA-transferase, subunit A GO:0008410 Reactome: R-HSA-77108 GYO_2381 dd1395be0a43ade2e40530a355822ea1 229 Gene3D G3DSA:3.40.1080.10 4 221 5.8E-72 T 14-10-2018 GYO_0846 5fdf75ae629c5d1b6616ecd3483ba7f7 362 Gene3D G3DSA:3.20.20.80 19 362 3.1E-146 T 14-10-2018 GYO_0846 5fdf75ae629c5d1b6616ecd3483ba7f7 362 PRINTS PR00739 Glycosyl hydrolase family 26 signature 185 202 1.1E-28 T 14-10-2018 IPR000805 Glycoside hydrolase family 26 GO:0006080|GO:0016985 KEGG: 00051+3.2.1.78|MetaCyc: PWY-7456 GYO_0846 5fdf75ae629c5d1b6616ecd3483ba7f7 362 PRINTS PR00739 Glycosyl hydrolase family 26 signature 220 243 1.1E-28 T 14-10-2018 IPR000805 Glycoside hydrolase family 26 GO:0006080|GO:0016985 KEGG: 00051+3.2.1.78|MetaCyc: PWY-7456 GYO_0846 5fdf75ae629c5d1b6616ecd3483ba7f7 362 PRINTS PR00739 Glycosyl hydrolase family 26 signature 256 268 1.1E-28 T 14-10-2018 IPR000805 Glycoside hydrolase family 26 GO:0006080|GO:0016985 KEGG: 00051+3.2.1.78|MetaCyc: PWY-7456 GYO_0846 5fdf75ae629c5d1b6616ecd3483ba7f7 362 PRINTS PR00739 Glycosyl hydrolase family 26 signature 118 132 1.1E-28 T 14-10-2018 IPR000805 Glycoside hydrolase family 26 GO:0006080|GO:0016985 KEGG: 00051+3.2.1.78|MetaCyc: PWY-7456 GYO_0846 5fdf75ae629c5d1b6616ecd3483ba7f7 362 SUPERFAMILY SSF51445 29 336 7.06E-57 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily GYO_0846 5fdf75ae629c5d1b6616ecd3483ba7f7 362 Pfam PF02156 Glycosyl hydrolase family 26 32 350 4.5E-134 T 14-10-2018 IPR022790 Glycosyl hydrolase family 26 domain GO:0004553 GYO_0846 5fdf75ae629c5d1b6616ecd3483ba7f7 362 PIRSF PIRSF018168 1 361 2.9E-152 T 14-10-2018 IPR016714 Mannan endo-1,4-beta-mannosidase GO:0006080|GO:0016985 KEGG: 00051+3.2.1.78|MetaCyc: PWY-7456 GYO_0903 ab3f6e48ab3f41e5fa3a4fda52b487bb 380 Hamap MF_01928 N5-carboxyaminoimidazole ribonucleotide synthase [purK]. 11 360 42.624 T 14-10-2018 IPR005875 Phosphoribosylaminoimidazole carboxylase, ATPase subunit GO:0004638|GO:0006189 GYO_0903 ab3f6e48ab3f41e5fa3a4fda52b487bb 380 SUPERFAMILY SSF52440 7 93 1.17E-25 T 14-10-2018 IPR016185 Pre-ATP-grasp domain superfamily GYO_0903 ab3f6e48ab3f41e5fa3a4fda52b487bb 380 TIGRFAM TIGR01161 purK: phosphoribosylaminoimidazole carboxylase, ATPase subunit 12 365 1.3E-144 T 14-10-2018 IPR005875 Phosphoribosylaminoimidazole carboxylase, ATPase subunit GO:0004638|GO:0006189 GYO_0903 ab3f6e48ab3f41e5fa3a4fda52b487bb 380 SUPERFAMILY SSF56059 107 305 3.01E-65 T 14-10-2018 GYO_0903 ab3f6e48ab3f41e5fa3a4fda52b487bb 380 Gene3D G3DSA:3.30.1490.20 117 185 4.9E-28 T 14-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 GYO_0903 ab3f6e48ab3f41e5fa3a4fda52b487bb 380 Gene3D G3DSA:3.40.50.20 2 116 1.6E-44 T 14-10-2018 GYO_0903 ab3f6e48ab3f41e5fa3a4fda52b487bb 380 Pfam PF02222 ATP-grasp domain 116 285 2.6E-64 T 14-10-2018 IPR003135 ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type GYO_0903 ab3f6e48ab3f41e5fa3a4fda52b487bb 380 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 12 72 2.2E-4 T 14-10-2018 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0050661 GYO_0903 ab3f6e48ab3f41e5fa3a4fda52b487bb 380 Gene3D G3DSA:3.30.470.20 186 373 3.2E-73 T 14-10-2018 GYO_0903 ab3f6e48ab3f41e5fa3a4fda52b487bb 380 SUPERFAMILY SSF51246 309 370 1.18E-12 T 14-10-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 GYO_3175 6c8a119c8f27505a472eae9bdd8f0b0c 410 PRINTS PR00072 Malic enzyme signature 187 203 1.0E-8 T 14-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 GYO_3175 6c8a119c8f27505a472eae9bdd8f0b0c 410 PRINTS PR00072 Malic enzyme signature 156 172 1.0E-8 T 14-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 GYO_3175 6c8a119c8f27505a472eae9bdd8f0b0c 410 PRINTS PR00072 Malic enzyme signature 77 99 1.0E-8 T 14-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 GYO_3175 6c8a119c8f27505a472eae9bdd8f0b0c 410 Pfam PF03949 Malic enzyme, NAD binding domain 162 383 6.9E-27 T 14-10-2018 IPR012302 Malic enzyme, NAD-binding GO:0051287 GYO_3175 6c8a119c8f27505a472eae9bdd8f0b0c 410 SMART SM00919 160 384 1.6E-136 T 14-10-2018 IPR012302 Malic enzyme, NAD-binding GO:0051287 GYO_3175 6c8a119c8f27505a472eae9bdd8f0b0c 410 Gene3D G3DSA:3.40.50.10380 1 157 7.6E-75 T 14-10-2018 IPR037062 Malic enzyme, N-terminal domain superfamily GO:0004471|GO:0055114 GYO_3175 6c8a119c8f27505a472eae9bdd8f0b0c 410 Gene3D G3DSA:3.40.50.720 158 410 6.4E-90 T 14-10-2018 GYO_3175 6c8a119c8f27505a472eae9bdd8f0b0c 410 SUPERFAMILY SSF53223 6 158 2.16E-57 T 14-10-2018 GYO_3175 6c8a119c8f27505a472eae9bdd8f0b0c 410 SUPERFAMILY SSF51735 160 405 2.24E-85 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily GYO_3175 6c8a119c8f27505a472eae9bdd8f0b0c 410 Pfam PF00390 Malic enzyme, N-terminal domain 16 148 9.6E-31 T 14-10-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 GYO_3175 6c8a119c8f27505a472eae9bdd8f0b0c 410 ProSitePatterns PS00331 Malic enzymes signature. 156 172 - T 14-10-2018 IPR015884 Malic enzyme, conserved site GO:0004471|GO:0055114 GYO_3175 6c8a119c8f27505a472eae9bdd8f0b0c 410 SMART SM01274 15 148 9.5E-85 T 14-10-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 GYO_3175 6c8a119c8f27505a472eae9bdd8f0b0c 410 PIRSF PIRSF000106 35 407 3.1E-86 T 14-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 GYO_4070 295e7a933c38afdfb02c8c2b815a7e68 185 Hamap MF_01521 Probable manganese efflux pump MntP [mntP]. 7 185 21.718 T 14-10-2018 IPR022929 Putative manganese efflux pump MntP GYO_4070 295e7a933c38afdfb02c8c2b815a7e68 185 Pfam PF02659 Putative manganese efflux pump 35 182 3.3E-41 T 14-10-2018 IPR003810 Putative manganese efflux pump GYO_2135 9880086ac2e64f966b96a4ec6583c6d4 147 Pfam PF08327 Activator of Hsp90 ATPase homolog 1-like protein 23 145 8.5E-13 T 14-10-2018 IPR013538 Activator of Hsp90 ATPase homologue 1-like GYO_2135 9880086ac2e64f966b96a4ec6583c6d4 147 SUPERFAMILY SSF55961 9 146 1.88E-39 T 14-10-2018 GYO_2135 9880086ac2e64f966b96a4ec6583c6d4 147 Gene3D G3DSA:3.30.530.20 4 147 9.2E-43 T 14-10-2018 IPR023393 START-like domain superfamily GYO_3229 ffce974f3f51214c3b6b7e2afc80c386 201 SUPERFAMILY SSF50249 92 199 6.86E-32 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold GYO_3229 ffce974f3f51214c3b6b7e2afc80c386 201 Pfam PF01588 Putative tRNA binding domain 96 197 7.5E-28 T 14-10-2018 IPR002547 tRNA-binding domain GO:0000049 Reactome: R-HSA-379716 GYO_3229 ffce974f3f51214c3b6b7e2afc80c386 201 Gene3D G3DSA:2.40.50.140 5 199 2.1E-74 T 14-10-2018 GYO_3229 ffce974f3f51214c3b6b7e2afc80c386 201 Gene3D G3DSA:3.30.1940.10 18 92 2.1E-74 T 14-10-2018 IPR037154 YtpR-like superfamily GYO_3229 ffce974f3f51214c3b6b7e2afc80c386 201 Pfam PF14794 Domain of unknown function (DUF4479) 23 91 1.7E-24 T 14-10-2018 IPR027855 Domain of unknown function DUF4479 GYO_3420 dd670daec7f47e509353da10429b9ac1 328 PRINTS PR00169 Potassium channel signature 9 32 1.6E-5 T 14-10-2018 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 GYO_3420 dd670daec7f47e509353da10429b9ac1 328 PRINTS PR00169 Potassium channel signature 42 64 1.6E-5 T 14-10-2018 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 GYO_3420 dd670daec7f47e509353da10429b9ac1 328 SUPERFAMILY SSF81324 10 133 5.89E-25 T 14-10-2018 GYO_3420 dd670daec7f47e509353da10429b9ac1 328 Pfam PF02254 TrkA-N domain 117 237 9.8E-18 T 14-10-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 GYO_3420 dd670daec7f47e509353da10429b9ac1 328 Gene3D G3DSA:3.40.50.720 98 237 6.8E-25 T 14-10-2018 GYO_3420 dd670daec7f47e509353da10429b9ac1 328 SUPERFAMILY SSF51735 115 250 3.54E-17 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily GYO_3420 dd670daec7f47e509353da10429b9ac1 328 Gene3D G3DSA:1.10.287.70 5 97 3.9E-20 T 14-10-2018 GYO_3420 dd670daec7f47e509353da10429b9ac1 328 Pfam PF07885 Ion channel 22 95 4.0E-16 T 14-10-2018 IPR013099 Potassium channel domain GYO_4285 ea0a78aba62e26a1051b786239312de6 365 ProSitePatterns PS00211 ABC transporters family signature. 135 149 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 GYO_4285 ea0a78aba62e26a1051b786239312de6 365 Pfam PF00005 ABC transporter 21 162 2.2E-28 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 GYO_4285 ea0a78aba62e26a1051b786239312de6 365 SMART SM00382 29 212 8.9E-13 T 14-10-2018 IPR003593 AAA+ ATPase domain GYO_4285 ea0a78aba62e26a1051b786239312de6 365 Pfam PF03459 TOBE domain 303 355 2.3E-6 T 14-10-2018 IPR005116 Transport-associated OB, type 1 GYO_4285 ea0a78aba62e26a1051b786239312de6 365 Gene3D G3DSA:2.40.50.100 240 361 1.5E-36 T 14-10-2018 GYO_4285 ea0a78aba62e26a1051b786239312de6 365 Gene3D G3DSA:2.40.50.140 284 349 1.5E-36 T 14-10-2018 GYO_4285 ea0a78aba62e26a1051b786239312de6 365 SUPERFAMILY SSF52540 4 243 6.1E-86 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase GYO_4285 ea0a78aba62e26a1051b786239312de6 365 Gene3D G3DSA:3.40.50.300 1 239 4.7E-75 T 14-10-2018 GYO_4285 ea0a78aba62e26a1051b786239312de6 365 SUPERFAMILY SSF50331 237 364 5.59E-27 T 14-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal GYO_2792 17899c2f053c00b6e58255158655a6cd 255 Pfam PF02565 Recombination protein O C terminal 82 238 1.7E-43 T 14-10-2018 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 GYO_2792 17899c2f053c00b6e58255158655a6cd 255 SUPERFAMILY SSF50249 1 75 1.68E-19 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold GYO_2792 17899c2f053c00b6e58255158655a6cd 255 Pfam PF11967 Recombination protein O N terminal 1 76 6.9E-27 T 14-10-2018 IPR022572 DNA replication/recombination mediator RecO, N-terminal GYO_2792 17899c2f053c00b6e58255158655a6cd 255 Gene3D G3DSA:2.40.50.140 3 76 7.5E-16 T 14-10-2018 GYO_2792 17899c2f053c00b6e58255158655a6cd 255 Gene3D G3DSA:3.30.60.100 146 185 8.7E-18 T 14-10-2018 GYO_2792 17899c2f053c00b6e58255158655a6cd 255 Gene3D G3DSA:1.20.1440.120 88 225 8.7E-18 T 14-10-2018 GYO_2792 17899c2f053c00b6e58255158655a6cd 255 Hamap MF_00201 DNA repair protein RecO [recO]. 1 243 30.704 T 14-10-2018 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 GYO_2792 17899c2f053c00b6e58255158655a6cd 255 TIGRFAM TIGR00613 reco: DNA repair protein RecO 3 243 4.4E-88 T 14-10-2018 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 GYO_2792 17899c2f053c00b6e58255158655a6cd 255 SUPERFAMILY SSF57863 80 231 4.97E-47 T 14-10-2018 IPR037278 ARFGAP/RecO-like zinc finger GYO_3251 65db7db2bef80343e834f96e4ef52edc 239 Gene3D G3DSA:3.30.70.580 62 231 1.2E-55 T 14-10-2018 GYO_3251 65db7db2bef80343e834f96e4ef52edc 239 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 100 114 - T 14-10-2018 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 GYO_3251 65db7db2bef80343e834f96e4ef52edc 239 SUPERFAMILY SSF55120 47 234 2.16E-42 T 14-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 GYO_3251 65db7db2bef80343e834f96e4ef52edc 239 Gene3D G3DSA:3.10.290.10 1 59 1.9E-17 T 14-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 GYO_3251 65db7db2bef80343e834f96e4ef52edc 239 Pfam PF00849 RNA pseudouridylate synthase 62 195 1.6E-17 T 14-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 GYO_3251 65db7db2bef80343e834f96e4ef52edc 239 SMART SM00363 1 59 1.6E-10 T 14-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 GYO_3251 65db7db2bef80343e834f96e4ef52edc 239 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 66 228 4.8E-45 T 14-10-2018 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 GYO_3251 65db7db2bef80343e834f96e4ef52edc 239 Pfam PF01479 S4 domain 1 44 1.2E-11 T 14-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 GYO_3251 65db7db2bef80343e834f96e4ef52edc 239 SUPERFAMILY SSF55174 1 59 7.85E-13 T 14-10-2018 GYO_3251 65db7db2bef80343e834f96e4ef52edc 239 Gene3D G3DSA:3.30.70.1560 129 213 1.2E-55 T 14-10-2018 GYO_2544 17b7a1bd9007097a101b1e57bcb18aa4 240 Gene3D G3DSA:1.10.10.10 138 239 7.6E-34 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily GYO_2544 17b7a1bd9007097a101b1e57bcb18aa4 240 SUPERFAMILY SSF52172 6 193 2.85E-44 T 14-10-2018 IPR011006 CheY-like superfamily GYO_2544 17b7a1bd9007097a101b1e57bcb18aa4 240 Gene3D G3DSA:3.40.50.2300 1 135 4.0E-42 T 14-10-2018 GYO_2544 17b7a1bd9007097a101b1e57bcb18aa4 240 SMART SM00862 158 235 2.6E-25 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 GYO_2544 17b7a1bd9007097a101b1e57bcb18aa4 240 Pfam PF00486 Transcriptional regulatory protein, C terminal 158 235 6.1E-27 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 GYO_2544 17b7a1bd9007097a101b1e57bcb18aa4 240 SMART SM00448 7 117 4.4E-48 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 GYO_2544 17b7a1bd9007097a101b1e57bcb18aa4 240 Pfam PF00072 Response regulator receiver domain 9 117 8.8E-32 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 GYO_1862 e073f4f3afa94acc5b15c3b8b4f83b35 713 Gene3D G3DSA:2.20.70.70 55 226 1.9E-58 T 14-10-2018 GYO_1862 e073f4f3afa94acc5b15c3b8b4f83b35 713 SUPERFAMILY SSF56601 191 589 4.1E-89 T 14-10-2018 IPR012338 Beta-lactamase/transpeptidase-like GYO_1862 e073f4f3afa94acc5b15c3b8b4f83b35 713 Gene3D G3DSA:3.30.70.2110 79 161 1.9E-58 T 14-10-2018 GYO_1862 e073f4f3afa94acc5b15c3b8b4f83b35 713 Gene3D G3DSA:3.40.710.10 233 582 2.0E-94 T 14-10-2018 GYO_1862 e073f4f3afa94acc5b15c3b8b4f83b35 713 SUPERFAMILY SSF54184 656 710 3.01E-11 T 14-10-2018 GYO_1862 e073f4f3afa94acc5b15c3b8b4f83b35 713 Gene3D G3DSA:3.90.1310.10 60 206 1.9E-58 T 14-10-2018 GYO_1862 e073f4f3afa94acc5b15c3b8b4f83b35 713 Pfam PF00905 Penicillin binding protein transpeptidase domain 266 574 7.1E-84 T 14-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 GYO_1862 e073f4f3afa94acc5b15c3b8b4f83b35 713 SUPERFAMILY SSF54184 598 652 2.09E-12 T 14-10-2018 GYO_1862 e073f4f3afa94acc5b15c3b8b4f83b35 713 SMART SM00740 655 711 0.62 T 14-10-2018 IPR005543 PASTA domain GYO_1862 e073f4f3afa94acc5b15c3b8b4f83b35 713 SMART SM00740 594 654 1.4E-10 T 14-10-2018 IPR005543 PASTA domain GYO_1862 e073f4f3afa94acc5b15c3b8b4f83b35 713 Pfam PF03717 Penicillin-binding Protein dimerisation domain 58 222 1.1E-22 T 14-10-2018 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 GYO_1862 e073f4f3afa94acc5b15c3b8b4f83b35 713 SUPERFAMILY SSF56519 56 239 1.96E-44 T 14-10-2018 IPR036138 Penicillin-binding protein, dimerisation domain superfamily GO:0008658 GYO_1862 e073f4f3afa94acc5b15c3b8b4f83b35 713 Pfam PF03793 PASTA domain 599 653 3.1E-8 T 14-10-2018 IPR005543 PASTA domain GYO_1862 e073f4f3afa94acc5b15c3b8b4f83b35 713 Pfam PF03793 PASTA domain 656 708 2.2E-5 T 14-10-2018 IPR005543 PASTA domain GYO_1515 ead43a1bb458e901d1d73fecd622ac03 466 Gene3D G3DSA:3.20.20.370 264 466 2.2E-69 T 14-10-2018 GYO_1515 ead43a1bb458e901d1d73fecd622ac03 466 Pfam PF01522 Polysaccharide deacetylase 273 387 9.2E-35 T 14-10-2018 IPR002509 NodB homology domain GO:0005975|GO:0016810 GYO_1515 ead43a1bb458e901d1d73fecd622ac03 466 Gene3D G3DSA:3.90.640.20 153 260 6.9E-19 T 14-10-2018 IPR037126 PdaC/RsiV-like superfamily GYO_1515 ead43a1bb458e901d1d73fecd622ac03 466 SUPERFAMILY SSF88713 272 458 6.88E-62 T 14-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 GYO_1515 ead43a1bb458e901d1d73fecd622ac03 466 Gene3D G3DSA:3.30.565.40 43 150 9.8E-14 T 14-10-2018 GYO_1515 ead43a1bb458e901d1d73fecd622ac03 466 Pfam PF13739 Domain of unknown function (DUF4163) 55 137 7.8E-13 T 14-10-2018 IPR025303 Deacetylase PdaC GYO_1515 ead43a1bb458e901d1d73fecd622ac03 466 PIRSF PIRSF037479 1 466 8.5E-180 T 14-10-2018 IPR017219 Peptidoglycan GlcNAc deacetylase GYO_1515 ead43a1bb458e901d1d73fecd622ac03 466 Pfam PF11738 Protein of unknown function (DUF3298) 155 233 1.7E-10 T 14-10-2018 IPR021729 Domain of unknown function DUF3298 GYO_0377 6f4451f059570abaa0f262e0c8072e19 874 Hamap MF_01871 UPF0753 protein . 25 874 24.114 T 14-10-2018 IPR018752 Uncharacterised protein family UPF0753 GYO_0377 6f4451f059570abaa0f262e0c8072e19 874 Pfam PF10070 Uncharacterized protein conserved in bacteria (DUF2309) 30 860 2.6E-272 T 14-10-2018 IPR018752 Uncharacterised protein family UPF0753 GYO_3116 f77d95183995d4e3fc8ff535767684fe 444 Pfam PF02754 Cysteine-rich domain 329 414 1.3E-16 T 14-10-2018 IPR004017 Cysteine-rich domain GYO_3116 f77d95183995d4e3fc8ff535767684fe 444 Pfam PF02754 Cysteine-rich domain 198 280 1.8E-18 T 14-10-2018 IPR004017 Cysteine-rich domain GYO_3116 f77d95183995d4e3fc8ff535767684fe 444 Gene3D G3DSA:1.10.1060.10 1 114 4.9E-9 T 14-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 GYO_3116 f77d95183995d4e3fc8ff535767684fe 444 PIRSF PIRSF000139 5 443 2.1E-141 T 14-10-2018 GYO_3116 f77d95183995d4e3fc8ff535767684fe 444 Pfam PF13183 4Fe-4S dicluster domain 23 92 2.7E-12 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain GYO_3116 f77d95183995d4e3fc8ff535767684fe 444 SUPERFAMILY SSF46548 5 107 6.28E-19 T 14-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 GYO_3116 f77d95183995d4e3fc8ff535767684fe 444 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 78 89 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site GYO_3236 cf5a619cc85fee226bb7d6369bf56008 566 PIRSF PIRSF000106 1 566 1.6E-221 T 14-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 GYO_3236 cf5a619cc85fee226bb7d6369bf56008 566 ProSitePatterns PS00331 Malic enzymes signature. 270 286 - T 14-10-2018 IPR015884 Malic enzyme, conserved site GO:0004471|GO:0055114 GYO_3236 cf5a619cc85fee226bb7d6369bf56008 566 Pfam PF03949 Malic enzyme, NAD binding domain 274 535 9.3E-106 T 14-10-2018 IPR012302 Malic enzyme, NAD-binding GO:0051287 GYO_3236 cf5a619cc85fee226bb7d6369bf56008 566 PRINTS PR00072 Malic enzyme signature 245 263 9.5E-68 T 14-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 GYO_3236 cf5a619cc85fee226bb7d6369bf56008 566 PRINTS PR00072 Malic enzyme signature 270 286 9.5E-68 T 14-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 GYO_3236 cf5a619cc85fee226bb7d6369bf56008 566 PRINTS PR00072 Malic enzyme signature 88 112 9.5E-68 T 14-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 GYO_3236 cf5a619cc85fee226bb7d6369bf56008 566 PRINTS PR00072 Malic enzyme signature 301 317 9.5E-68 T 14-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 GYO_3236 cf5a619cc85fee226bb7d6369bf56008 566 PRINTS PR00072 Malic enzyme signature 186 208 9.5E-68 T 14-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 GYO_3236 cf5a619cc85fee226bb7d6369bf56008 566 PRINTS PR00072 Malic enzyme signature 150 179 9.5E-68 T 14-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 GYO_3236 cf5a619cc85fee226bb7d6369bf56008 566 PRINTS PR00072 Malic enzyme signature 413 429 9.5E-68 T 14-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 GYO_3236 cf5a619cc85fee226bb7d6369bf56008 566 Gene3D G3DSA:3.40.50.10380 16 271 7.2E-105 T 14-10-2018 IPR037062 Malic enzyme, N-terminal domain superfamily GO:0004471|GO:0055114 GYO_3236 cf5a619cc85fee226bb7d6369bf56008 566 SMART SM01274 82 264 1.5E-94 T 14-10-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 GYO_3236 cf5a619cc85fee226bb7d6369bf56008 566 SMART SM00919 274 535 9.0E-127 T 14-10-2018 IPR012302 Malic enzyme, NAD-binding GO:0051287 GYO_3236 cf5a619cc85fee226bb7d6369bf56008 566 Gene3D G3DSA:3.40.50.720 272 565 2.9E-109 T 14-10-2018 GYO_3236 cf5a619cc85fee226bb7d6369bf56008 566 SUPERFAMILY SSF51735 274 564 4.38E-92 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily GYO_3236 cf5a619cc85fee226bb7d6369bf56008 566 SUPERFAMILY SSF53223 4 273 1.8E-103 T 14-10-2018 GYO_3236 cf5a619cc85fee226bb7d6369bf56008 566 Pfam PF00390 Malic enzyme, N-terminal domain 82 264 3.5E-72 T 14-10-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 GYO_4478 8cbd8e155f35c03ddab85af09d32c1c5 244 Gene3D G3DSA:1.10.1660.10 2 138 1.2E-33 T 14-10-2018 GYO_4478 8cbd8e155f35c03ddab85af09d32c1c5 244 Pfam PF07739 TipAS antibiotic-recognition domain 149 238 5.0E-9 T 14-10-2018 IPR012925 TipAS antibiotic-recognition domain GYO_4478 8cbd8e155f35c03ddab85af09d32c1c5 244 SUPERFAMILY SSF46955 3 116 5.49E-24 T 14-10-2018 IPR009061 Putative DNA-binding domain superfamily GYO_4478 8cbd8e155f35c03ddab85af09d32c1c5 244 SMART SM00422 3 72 1.4E-20 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 GYO_4478 8cbd8e155f35c03ddab85af09d32c1c5 244 Pfam PF13411 MerR HTH family regulatory protein 4 71 4.4E-14 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 GYO_2024 3eb57937cb86a954aebfe61ff85604bb 316 Gene3D G3DSA:3.40.50.620 5 188 5.3E-54 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold GYO_2024 3eb57937cb86a954aebfe61ff85604bb 316 TIGRFAM TIGR00083 ribF: riboflavin biosynthesis protein RibF 21 312 1.6E-121 T 14-10-2018 IPR002606 Riboflavin kinase, bacterial GO:0003919|GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|MetaCyc: PWY-7863 GYO_2024 3eb57937cb86a954aebfe61ff85604bb 316 SUPERFAMILY SSF52374 19 182 3.66E-28 T 14-10-2018 GYO_2024 3eb57937cb86a954aebfe61ff85604bb 316 Pfam PF06574 FAD synthetase 14 168 1.3E-49 T 14-10-2018 IPR015864 FAD synthetase GO:0003919|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|MetaCyc: PWY-7863 GYO_2024 3eb57937cb86a954aebfe61ff85604bb 316 SMART SM00904 185 312 1.4E-60 T 14-10-2018 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26|MetaCyc: PWY-5523|MetaCyc: PWY-6168|MetaCyc: PWY-7863|Reactome: R-HSA-196843 GYO_2024 3eb57937cb86a954aebfe61ff85604bb 316 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 21 96 1.2E-12 T 14-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 GYO_2024 3eb57937cb86a954aebfe61ff85604bb 316 PIRSF PIRSF004491 3 316 9.0E-110 T 14-10-2018 IPR002606 Riboflavin kinase, bacterial GO:0003919|GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|MetaCyc: PWY-7863 GYO_2024 3eb57937cb86a954aebfe61ff85604bb 316 SUPERFAMILY SSF82114 175 313 1.61E-46 T 14-10-2018 IPR023465 Riboflavin kinase domain superfamily GO:0008531|GO:0009231 Reactome: R-HSA-196843 GYO_2024 3eb57937cb86a954aebfe61ff85604bb 316 Pfam PF01687 Riboflavin kinase 186 311 2.0E-36 T 14-10-2018 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26|MetaCyc: PWY-5523|MetaCyc: PWY-6168|MetaCyc: PWY-7863|Reactome: R-HSA-196843 GYO_2024 3eb57937cb86a954aebfe61ff85604bb 316 Gene3D G3DSA:2.40.30.30 190 316 1.2E-41 T 14-10-2018 IPR023465 Riboflavin kinase domain superfamily GO:0008531|GO:0009231 Reactome: R-HSA-196843 GYO_0441 0f84b69a3c288c4dbaa6e7a3c8cc6e78 324 Hamap MF_00313 Glutaminase [glsA]. 11 324 44.041 T 14-10-2018 IPR015868 Glutaminase GO:0004359|GO:0006541 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|Reactome: R-HSA-210500|Reactome: R-HSA-5628897|Reactome: R-HSA-70614 GYO_0441 0f84b69a3c288c4dbaa6e7a3c8cc6e78 324 Gene3D G3DSA:3.40.710.10 40 324 1.2E-133 T 14-10-2018 GYO_0441 0f84b69a3c288c4dbaa6e7a3c8cc6e78 324 SUPERFAMILY SSF56601 6 324 5.13E-122 T 14-10-2018 IPR012338 Beta-lactamase/transpeptidase-like GYO_0441 0f84b69a3c288c4dbaa6e7a3c8cc6e78 324 Pfam PF04960 Glutaminase 29 324 1.3E-105 T 14-10-2018 IPR015868 Glutaminase GO:0004359|GO:0006541 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|Reactome: R-HSA-210500|Reactome: R-HSA-5628897|Reactome: R-HSA-70614 GYO_0441 0f84b69a3c288c4dbaa6e7a3c8cc6e78 324 Gene3D G3DSA:1.10.1500.10 68 205 1.2E-133 T 14-10-2018 GYO_0441 0f84b69a3c288c4dbaa6e7a3c8cc6e78 324 TIGRFAM TIGR03814 Gln_ase: glutaminase A 15 324 4.9E-121 T 14-10-2018 IPR015868 Glutaminase GO:0004359|GO:0006541 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|Reactome: R-HSA-210500|Reactome: R-HSA-5628897|Reactome: R-HSA-70614 GYO_3696 010543ffb21412f12ef0abdfa36aebd9 1030 Pfam PF14028 Lantibiotic biosynthesis dehydratase C-term 756 1013 1.7E-30 T 14-10-2018 IPR023809 Thiopeptide-type bacteriocin biosynthesis domain GYO_3696 010543ffb21412f12ef0abdfa36aebd9 1030 TIGRFAM TIGR03891 thiopep_ocin: thiopeptide-type bacteriocin biosynthesis domain 756 1014 2.5E-60 T 14-10-2018 IPR023809 Thiopeptide-type bacteriocin biosynthesis domain GYO_3696 010543ffb21412f12ef0abdfa36aebd9 1030 Pfam PF04738 Lantibiotic dehydratase, C terminus 40 682 2.5E-127 T 14-10-2018 IPR006827 Lantibiotic dehydratase, N-terminal GYO_2775 1c7c758b049a3228ef4250b6a37b29a6 293 PIRSF PIRSF006483 1 292 3.3E-90 T 14-10-2018 IPR003740 Uncharacterised membrane protein YitT GYO_2775 1c7c758b049a3228ef4250b6a37b29a6 293 Pfam PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 19 225 1.8E-64 T 14-10-2018 IPR003740 Uncharacterised membrane protein YitT GYO_2775 1c7c758b049a3228ef4250b6a37b29a6 293 Gene3D G3DSA:3.30.70.120 203 278 5.0E-26 T 14-10-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal GYO_2775 1c7c758b049a3228ef4250b6a37b29a6 293 Pfam PF10035 Uncharacterized protein conserved in bacteria (DUF2179) 231 285 6.4E-22 T 14-10-2018 IPR019264 Domain of unknown function DUF2179 GYO_0675 5e774a32826fc34cad48146cec8234ad 290 TIGRFAM TIGR01297 CDF: cation diffusion facilitator family transporter 11 287 1.4E-70 T 14-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 GYO_0675 5e774a32826fc34cad48146cec8234ad 290 Pfam PF01545 Cation efflux family 15 206 6.0E-49 T 14-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 GYO_0675 5e774a32826fc34cad48146cec8234ad 290 Gene3D G3DSA:1.20.1510.10 11 207 2.7E-53 T 14-10-2018 IPR027469 Cation efflux transmembrane domain superfamily GYO_0675 5e774a32826fc34cad48146cec8234ad 290 Gene3D G3DSA:3.30.70.1350 208 288 1.6E-16 T 14-10-2018 IPR036837 Cation efflux protein, cytoplasmic domain superfamily Reactome: R-HSA-435368 GYO_0675 5e774a32826fc34cad48146cec8234ad 290 Pfam PF16916 Dimerisation domain of Zinc Transporter 216 286 6.0E-18 T 14-10-2018 IPR027470 Cation efflux protein, cytoplasmic domain GYO_0675 5e774a32826fc34cad48146cec8234ad 290 SUPERFAMILY SSF160240 214 288 3.92E-18 T 14-10-2018 IPR036837 Cation efflux protein, cytoplasmic domain superfamily Reactome: R-HSA-435368 GYO_0675 5e774a32826fc34cad48146cec8234ad 290 SUPERFAMILY SSF161111 7 208 4.58E-52 T 14-10-2018 IPR027469 Cation efflux transmembrane domain superfamily GYO_2542 0b2e3a0431f5891016bce75af4f7a787 194 Gene3D G3DSA:1.10.1740.10 1 71 5.3E-24 T 14-10-2018 GYO_2542 0b2e3a0431f5891016bce75af4f7a787 194 SUPERFAMILY SSF88946 3 90 2.31E-22 T 14-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 GYO_2542 0b2e3a0431f5891016bce75af4f7a787 194 SUPERFAMILY SSF88659 93 166 2.06E-13 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like GYO_2542 0b2e3a0431f5891016bce75af4f7a787 194 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 5 165 1.6E-30 T 14-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 GYO_2542 0b2e3a0431f5891016bce75af4f7a787 194 Pfam PF08281 Sigma-70, region 4 110 159 1.6E-9 T 14-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 GYO_2542 0b2e3a0431f5891016bce75af4f7a787 194 Gene3D G3DSA:1.10.10.10 89 167 7.6E-17 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily GYO_2542 0b2e3a0431f5891016bce75af4f7a787 194 ProSitePatterns PS01063 Sigma-70 factors ECF subfamily signature. 30 61 - T 14-10-2018 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 GYO_2542 0b2e3a0431f5891016bce75af4f7a787 194 Pfam PF04542 Sigma-70 region 2 8 74 1.2E-16 T 14-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 GYO_2195 2350f123a1dd75c303031c519f23e4b4 380 Gene3D G3DSA:1.10.540.10 1 120 6.8E-44 T 14-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 GYO_2195 2350f123a1dd75c303031c519f23e4b4 380 Gene3D G3DSA:1.20.140.10 235 380 1.9E-58 T 14-10-2018 GYO_2195 2350f123a1dd75c303031c519f23e4b4 380 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 122 218 9.6E-26 T 14-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 GYO_2195 2350f123a1dd75c303031c519f23e4b4 380 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 231 379 4.6E-53 T 14-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 GYO_2195 2350f123a1dd75c303031c519f23e4b4 380 ProSitePatterns PS00072 Acyl-CoA dehydrogenases signature 1. 124 136 - T 14-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 GYO_2195 2350f123a1dd75c303031c519f23e4b4 380 Gene3D G3DSA:2.40.110.10 122 234 1.1E-38 T 14-10-2018 GYO_2195 2350f123a1dd75c303031c519f23e4b4 380 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 6 118 1.2E-37 T 14-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 GYO_2195 2350f123a1dd75c303031c519f23e4b4 380 SUPERFAMILY SSF56645 2 243 6.54E-83 T 14-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 GYO_2195 2350f123a1dd75c303031c519f23e4b4 380 PIRSF PIRSF016578 3 380 1.8E-27 T 14-10-2018 GYO_2195 2350f123a1dd75c303031c519f23e4b4 380 SUPERFAMILY SSF47203 229 380 2.09E-60 T 14-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 GYO_2195 2350f123a1dd75c303031c519f23e4b4 380 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 337 356 - T 14-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 GYO_3349 dd3b5f89bde6ee83ff8d5a342a37e5ee 798 ProSitePatterns PS00102 Phosphorylase pyridoxal-phosphate attachment site. 638 650 - T 14-10-2018 IPR035090 Phosphorylase pyridoxal-phosphate attachment site KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: R-HSA-70221 GYO_3349 dd3b5f89bde6ee83ff8d5a342a37e5ee 798 PIRSF PIRSF000460 2 798 8.7E-247 T 14-10-2018 IPR000811 Glycosyl transferase, family 35 GO:0005975|GO:0008184 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: R-HSA-70221 GYO_3349 dd3b5f89bde6ee83ff8d5a342a37e5ee 798 Gene3D G3DSA:3.40.50.2000 14 794 0.0 T 14-10-2018 GYO_3349 dd3b5f89bde6ee83ff8d5a342a37e5ee 798 Gene3D G3DSA:3.40.50.2000 460 787 0.0 T 14-10-2018 GYO_3349 dd3b5f89bde6ee83ff8d5a342a37e5ee 798 SUPERFAMILY SSF53756 5 796 2.2E-296 T 14-10-2018 GYO_3349 dd3b5f89bde6ee83ff8d5a342a37e5ee 798 TIGRFAM TIGR02093 P_ylase: glycogen/starch/alpha-glucan phosphorylases 5 794 0.0 T 14-10-2018 IPR011833 Glycogen/starch/alpha-glucan phosphorylase GO:0004645|GO:0005975|GO:0030170 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: R-HSA-70221 GYO_3349 dd3b5f89bde6ee83ff8d5a342a37e5ee 798 Pfam PF00343 Carbohydrate phosphorylase 93 794 0.0 T 14-10-2018 IPR000811 Glycosyl transferase, family 35 GO:0005975|GO:0008184 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: R-HSA-70221 GYO_4031 36cb67d2d4ab673e81c1ab44ce90d8e6 105 ProDom PD002319 SUBUNIT GAMMA HYDROLASE UREASE UREA AMIDOHYDROLASE UREASE ALPHA GAMMA/BETA METAL-BINDING 9 99 1.0E-47 T 14-10-2018 IPR002026 Urease, gamma/gamma-beta subunit GO:0016151|GO:0043419 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 GYO_4031 36cb67d2d4ab673e81c1ab44ce90d8e6 105 Pfam PF00547 Urease, gamma subunit 1 99 4.9E-45 T 14-10-2018 IPR002026 Urease, gamma/gamma-beta subunit GO:0016151|GO:0043419 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 GYO_4031 36cb67d2d4ab673e81c1ab44ce90d8e6 105 TIGRFAM TIGR00193 urease_gam: urease, gamma subunit 1 102 4.8E-57 T 14-10-2018 IPR002026 Urease, gamma/gamma-beta subunit GO:0016151|GO:0043419 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 GYO_4031 36cb67d2d4ab673e81c1ab44ce90d8e6 105 Gene3D G3DSA:3.30.280.10 1 102 3.6E-46 T 14-10-2018 IPR036463 Urease, gamma subunit superfamily GO:0016151|GO:0043419 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 GYO_4031 36cb67d2d4ab673e81c1ab44ce90d8e6 105 Hamap MF_00739 Urease subunit gamma [ureA]. 1 100 33.239 T 14-10-2018 IPR012010 Urease, gamma subunit GO:0009039|GO:0019627 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 GYO_4031 36cb67d2d4ab673e81c1ab44ce90d8e6 105 PIRSF PIRSF001223 1 100 1.5E-49 T 14-10-2018 IPR012010 Urease, gamma subunit GO:0009039|GO:0019627 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 GYO_4031 36cb67d2d4ab673e81c1ab44ce90d8e6 105 SUPERFAMILY SSF54111 1 101 5.49E-44 T 14-10-2018 IPR036463 Urease, gamma subunit superfamily GO:0016151|GO:0043419 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 GYO_1301 5407a2bf421b82d2c933d27bea9e78ee 367 Gene3D G3DSA:3.40.630.10 2 350 8.7E-139 T 14-10-2018 GYO_1301 5407a2bf421b82d2c933d27bea9e78ee 367 TIGRFAM TIGR01891 amidohydrolases: amidohydrolase 2 353 5.5E-113 T 14-10-2018 IPR017439 Amidohydrolase GO:0016787 GYO_1301 5407a2bf421b82d2c933d27bea9e78ee 367 SUPERFAMILY SSF53187 2 364 1.72E-79 T 14-10-2018 GYO_1301 5407a2bf421b82d2c933d27bea9e78ee 367 Pfam PF01546 Peptidase family M20/M25/M40 50 360 4.1E-32 T 14-10-2018 IPR002933 Peptidase M20 GO:0016787 GYO_1301 5407a2bf421b82d2c933d27bea9e78ee 367 PIRSF PIRSF005962 1 367 5.3E-129 T 14-10-2018 IPR017439 Amidohydrolase GO:0016787 GYO_1301 5407a2bf421b82d2c933d27bea9e78ee 367 Pfam PF07687 Peptidase dimerisation domain 163 255 2.9E-7 T 14-10-2018 IPR011650 Peptidase M20, dimerisation domain GYO_1301 5407a2bf421b82d2c933d27bea9e78ee 367 Gene3D G3DSA:3.30.70.360 159 273 8.7E-139 T 14-10-2018 GYO_1301 5407a2bf421b82d2c933d27bea9e78ee 367 SUPERFAMILY SSF55031 159 277 1.7E-28 T 14-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain GYO_1804 dbd241b62e741020ce967c677a46eac2 490 SUPERFAMILY SSF53383 6 385 6.93E-98 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase GYO_1804 dbd241b62e741020ce967c677a46eac2 490 Pfam PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain 380 457 8.2E-14 T 14-10-2018 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal GO:0003824 GYO_1804 dbd241b62e741020ce967c677a46eac2 490 Gene3D G3DSA:3.40.640.10 6 283 2.2E-94 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 GYO_1804 dbd241b62e741020ce967c677a46eac2 490 Gene3D G3DSA:3.90.105.10 420 477 5.6E-19 T 14-10-2018 GYO_1804 dbd241b62e741020ce967c677a46eac2 490 SUPERFAMILY SSF55904 341 487 4.32E-41 T 14-10-2018 IPR036633 Orn/Lys/Arg decarboxylase, C-terminal domain superfamily GO:0003824 GYO_1804 dbd241b62e741020ce967c677a46eac2 490 Gene3D G3DSA:3.90.1150.10 312 406 9.2E-7 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 GYO_1804 dbd241b62e741020ce967c677a46eac2 490 ProSitePatterns PS00703 Orn/Lys/Arg decarboxylases family 1 pyridoxal-P attachment site. 221 235 - T 14-10-2018 IPR000310 Orn/Lys/Arg decarboxylase, major domain GO:0003824 GYO_1804 dbd241b62e741020ce967c677a46eac2 490 Pfam PF01276 Orn/Lys/Arg decarboxylase, major domain 6 370 6.0E-125 T 14-10-2018 IPR000310 Orn/Lys/Arg decarboxylase, major domain GO:0003824 GYO_0362 03560a70e28d2a11c0db0ad77981d335 305 Gene3D G3DSA:3.40.50.10490 3 222 7.5E-80 T 14-10-2018 GYO_0362 03560a70e28d2a11c0db0ad77981d335 305 TIGRFAM TIGR00274 TIGR00274: N-acetylmuramic acid 6-phosphate etherase 10 300 3.0E-151 T 14-10-2018 IPR005488 N-acetylmuramic acid 6-phosphate etherase MurQ GO:0016835|GO:0046348 KEGG: 00520+4.2.1.126 GYO_0362 03560a70e28d2a11c0db0ad77981d335 305 Gene3D G3DSA:1.10.8.1080 223 301 2.5E-29 T 14-10-2018 GYO_0362 03560a70e28d2a11c0db0ad77981d335 305 SUPERFAMILY SSF53697 10 251 2.02E-69 T 14-10-2018 GYO_0362 03560a70e28d2a11c0db0ad77981d335 305 ProSitePatterns PS01272 Glucokinase regulatory protein family signature. 189 206 - T 14-10-2018 IPR005486 Glucokinase regulatory protein, conserved site KEGG: 00520+4.2.1.126|Reactome: R-HSA-170822|Reactome: R-HSA-5619107 GYO_0362 03560a70e28d2a11c0db0ad77981d335 305 Pfam PF01380 SIS domain 133 200 2.0E-10 T 14-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 GYO_0362 03560a70e28d2a11c0db0ad77981d335 305 Hamap MF_00068 N-acetylmuramic acid 6-phosphate etherase [murQ]. 6 299 41.891 T 14-10-2018 IPR005488 N-acetylmuramic acid 6-phosphate etherase MurQ GO:0016835|GO:0046348 KEGG: 00520+4.2.1.126 GYO_1577 33c2b4bf3c0c7bba1cf2d297580ba666 146 ProDom PD033466 XKDJ PHAGE PHAGE-LIKE PBSX RELATED LIN1276 ELEMENT YQBJ 1 146 7.0E-78 T 14-10-2018 GYO_4312 e5c26f8bd711006a1f2057d320fc4fbd 202 Gene3D G3DSA:3.30.240.20 85 158 1.5E-20 T 14-10-2018 IPR023090 UPF0702, alpha/beta domain superfamily GYO_4312 e5c26f8bd711006a1f2057d320fc4fbd 202 Pfam PF04239 Protein of unknown function (DUF421) 92 165 5.5E-25 T 14-10-2018 IPR007353 Protein of unknown function DUF421 GYO_2619 3908f5c5ae460b2d65d1b016c321b935 319 TIGRFAM TIGR00554 panK_bact: pantothenate kinase 11 318 2.4E-167 T 14-10-2018 IPR004566 Pantothenate kinase GO:0004594|GO:0005524|GO:0005737|GO:0015937 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961 GYO_2619 3908f5c5ae460b2d65d1b016c321b935 319 PIRSF PIRSF000545 1 319 2.7E-141 T 14-10-2018 IPR004566 Pantothenate kinase GO:0004594|GO:0005524|GO:0005737|GO:0015937 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961 GYO_2619 3908f5c5ae460b2d65d1b016c321b935 319 Hamap MF_00215 Pantothenate kinase [coaA]. 1 319 154.683 T 14-10-2018 IPR004566 Pantothenate kinase GO:0004594|GO:0005524|GO:0005737|GO:0015937 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961 GYO_2619 3908f5c5ae460b2d65d1b016c321b935 319 Gene3D G3DSA:3.40.50.300 2 319 9.6E-94 T 14-10-2018 GYO_2619 3908f5c5ae460b2d65d1b016c321b935 319 SUPERFAMILY SSF52540 10 317 7.93E-72 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase GYO_2619 3908f5c5ae460b2d65d1b016c321b935 319 Pfam PF00485 Phosphoribulokinase / Uridine kinase family 91 245 5.5E-15 T 14-10-2018 IPR006083 Phosphoribulokinase/uridine kinase GO:0005524|GO:0016301 Reactome: R-HSA-73614 GYO_3158 c304c6811ec1c534c37799cc76582d5c 276 ProSitePatterns PS01242 Zinc finger FPG-type signature. 249 273 - T 14-10-2018 IPR015887 DNA glycosylase/AP lyase, zinc finger domain, DNA-binding site GO:0003677|GO:0003906|GO:0006281|GO:0008270|GO:0016799 GYO_3158 c304c6811ec1c534c37799cc76582d5c 276 Pfam PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain 134 223 1.7E-33 T 14-10-2018 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding GO:0003684|GO:0003906|GO:0006289|GO:0008270|GO:0016799 GYO_3158 c304c6811ec1c534c37799cc76582d5c 276 SUPERFAMILY SSF46946 134 223 6.8E-30 T 14-10-2018 IPR010979 Ribosomal protein S13-like, H2TH GO:0003676 GYO_3158 c304c6811ec1c534c37799cc76582d5c 276 Gene3D G3DSA:3.20.190.10 2 129 2.4E-42 T 14-10-2018 IPR035937 MutM-like, N-terminal GYO_3158 c304c6811ec1c534c37799cc76582d5c 276 Hamap MF_00103 Formamidopyrimidine-DNA glycosylase [mutM]. 1 274 44.59 T 14-10-2018 IPR020629 Formamidopyrimidine-DNA glycosylase GO:0003906|GO:0006281|GO:0008270|GO:0008534 GYO_3158 c304c6811ec1c534c37799cc76582d5c 276 Pfam PF06827 Zinc finger found in FPG and IleRS 247 274 8.8E-11 T 14-10-2018 IPR010663 Zinc finger, FPG/IleRS-type Reactome: R-HSA-379726 GYO_3158 c304c6811ec1c534c37799cc76582d5c 276 SMART SM01232 134 226 4.3E-46 T 14-10-2018 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding GO:0003684|GO:0003906|GO:0006289|GO:0008270|GO:0016799 GYO_3158 c304c6811ec1c534c37799cc76582d5c 276 Pfam PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain 2 117 4.4E-34 T 14-10-2018 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 GYO_3158 c304c6811ec1c534c37799cc76582d5c 276 TIGRFAM TIGR00577 fpg: DNA-formamidopyrimidine glycosylase 1 273 1.0E-117 T 14-10-2018 IPR020629 Formamidopyrimidine-DNA glycosylase GO:0003906|GO:0006281|GO:0008270|GO:0008534 GYO_3158 c304c6811ec1c534c37799cc76582d5c 276 SUPERFAMILY SSF81624 2 138 1.83E-42 T 14-10-2018 IPR035937 MutM-like, N-terminal GYO_3158 c304c6811ec1c534c37799cc76582d5c 276 Gene3D G3DSA:1.10.8.50 136 275 1.0E-49 T 14-10-2018 GYO_3158 c304c6811ec1c534c37799cc76582d5c 276 SUPERFAMILY SSF57716 223 274 1.23E-16 T 14-10-2018 GYO_3158 c304c6811ec1c534c37799cc76582d5c 276 SMART SM00898 2 118 1.6E-52 T 14-10-2018 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 GYO_0655 1a5dd2f27625f1808e3b6e622397ec69 424 TIGRFAM TIGR01197 nramp: metal ion transporter, metal ion (Mn2+/Fe2+) transporter (Nramp) family 27 391 3.1E-139 T 14-10-2018 IPR001046 NRAMP family GO:0016020|GO:0030001|GO:0046873 Reactome: R-HSA-425410 GYO_0655 1a5dd2f27625f1808e3b6e622397ec69 424 Pfam PF01566 Natural resistance-associated macrophage protein 49 397 3.0E-116 T 14-10-2018 IPR001046 NRAMP family GO:0016020|GO:0030001|GO:0046873 Reactome: R-HSA-425410 GYO_0655 1a5dd2f27625f1808e3b6e622397ec69 424 PRINTS PR00447 Natural resistance-associated macrophage protein signature 136 155 1.7E-30 T 14-10-2018 IPR001046 NRAMP family GO:0016020|GO:0030001|GO:0046873 Reactome: R-HSA-425410 GYO_0655 1a5dd2f27625f1808e3b6e622397ec69 424 PRINTS PR00447 Natural resistance-associated macrophage protein signature 211 234 1.7E-30 T 14-10-2018 IPR001046 NRAMP family GO:0016020|GO:0030001|GO:0046873 Reactome: R-HSA-425410 GYO_0655 1a5dd2f27625f1808e3b6e622397ec69 424 PRINTS PR00447 Natural resistance-associated macrophage protein signature 161 182 1.7E-30 T 14-10-2018 IPR001046 NRAMP family GO:0016020|GO:0030001|GO:0046873 Reactome: R-HSA-425410 GYO_0655 1a5dd2f27625f1808e3b6e622397ec69 424 PRINTS PR00447 Natural resistance-associated macrophage protein signature 108 134 1.7E-30 T 14-10-2018 IPR001046 NRAMP family GO:0016020|GO:0030001|GO:0046873 Reactome: R-HSA-425410 GYO_0655 1a5dd2f27625f1808e3b6e622397ec69 424 PRINTS PR00447 Natural resistance-associated macrophage protein signature 313 332 1.7E-30 T 14-10-2018 IPR001046 NRAMP family GO:0016020|GO:0030001|GO:0046873 Reactome: R-HSA-425410 GYO_0655 1a5dd2f27625f1808e3b6e622397ec69 424 Hamap MF_00221 Divalent metal cation transporter MntH [mntH]. 12 423 39.371 T 14-10-2018 IPR001046 NRAMP family GO:0016020|GO:0030001|GO:0046873 Reactome: R-HSA-425410 GYO_2365 ebfc5d4b6a4b60754b2c673916c5eda3 233 Gene3D G3DSA:3.40.50.150 10 233 1.5E-35 T 14-10-2018 GYO_2365 ebfc5d4b6a4b60754b2c673916c5eda3 233 Pfam PF08241 Methyltransferase domain 40 133 2.2E-19 T 14-10-2018 IPR013216 Methyltransferase type 11 GO:0008168 GYO_2365 ebfc5d4b6a4b60754b2c673916c5eda3 233 SUPERFAMILY SSF53335 16 212 2.76E-34 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase GYO_1025 8598a39a383614a5d10ac93ec9912dca 319 PIRSF PIRSF017082 1 319 1.7E-102 T 14-10-2018 IPR005064 Bordetella uptake gene GO:0030288 GYO_1025 8598a39a383614a5d10ac93ec9912dca 319 Gene3D G3DSA:3.40.190.10 123 249 5.0E-60 T 14-10-2018 GYO_1025 8598a39a383614a5d10ac93ec9912dca 319 SUPERFAMILY SSF53850 118 287 6.52E-10 T 14-10-2018 GYO_1025 8598a39a383614a5d10ac93ec9912dca 319 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 62 315 6.3E-22 T 14-10-2018 IPR005064 Bordetella uptake gene GO:0030288 GYO_1025 8598a39a383614a5d10ac93ec9912dca 319 Gene3D G3DSA:3.40.190.150 28 313 5.0E-60 T 14-10-2018 GYO_2468 97de94ccc1d2f6bb42b7502a49e262ea 286 Pfam PF02569 Pantoate-beta-alanine ligase 4 277 2.9E-99 T 14-10-2018 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1 GYO_2468 97de94ccc1d2f6bb42b7502a49e262ea 286 Gene3D G3DSA:3.40.50.620 1 177 6.3E-72 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold GYO_2468 97de94ccc1d2f6bb42b7502a49e262ea 286 SUPERFAMILY SSF52374 1 279 1.96E-103 T 14-10-2018 GYO_2468 97de94ccc1d2f6bb42b7502a49e262ea 286 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 26 87 5.3E-9 T 14-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 GYO_2468 97de94ccc1d2f6bb42b7502a49e262ea 286 TIGRFAM TIGR00018 panC: pantoate--beta-alanine ligase 1 279 1.0E-131 T 14-10-2018 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1 GYO_2468 97de94ccc1d2f6bb42b7502a49e262ea 286 Hamap MF_00158 Pantothenate synthetase [panC]. 2 278 39.114 T 14-10-2018 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1 GYO_2468 97de94ccc1d2f6bb42b7502a49e262ea 286 Gene3D G3DSA:3.30.1300.10 178 276 6.0E-33 T 14-10-2018 GYO_3597 d599e08169caa37b7b9ffa3b1155bd67 273 ProSitePatterns PS00211 ABC transporters family signature. 140 154 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 GYO_3597 d599e08169caa37b7b9ffa3b1155bd67 273 Gene3D G3DSA:3.40.50.300 1 252 3.1E-66 T 14-10-2018 GYO_3597 d599e08169caa37b7b9ffa3b1155bd67 273 SMART SM00382 28 225 1.6E-15 T 14-10-2018 IPR003593 AAA+ ATPase domain GYO_3597 d599e08169caa37b7b9ffa3b1155bd67 273 SUPERFAMILY SSF52540 4 229 1.41E-60 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase GYO_3597 d599e08169caa37b7b9ffa3b1155bd67 273 Pfam PF00005 ABC transporter 20 167 8.2E-33 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 GYO_2554 15edc4821ed140b80644cd1b2f30551b 197 Hamap MF_01804 Segregation and condensation protein B [scpB]. 6 185 35.23 T 14-10-2018 IPR005234 Chromosome segregation/condensation protein ScpB GO:0051304 GYO_2554 15edc4821ed140b80644cd1b2f30551b 197 PIRSF PIRSF019345 3 195 1.2E-55 T 14-10-2018 IPR005234 Chromosome segregation/condensation protein ScpB GO:0051304 GYO_2554 15edc4821ed140b80644cd1b2f30551b 197 SUPERFAMILY SSF46785 3 83 8.17E-17 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily GYO_2554 15edc4821ed140b80644cd1b2f30551b 197 Gene3D G3DSA:1.10.10.10 86 181 9.2E-35 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily GYO_2554 15edc4821ed140b80644cd1b2f30551b 197 Pfam PF04079 Segregation and condensation complex subunit ScpB 10 169 1.3E-53 T 14-10-2018 IPR005234 Chromosome segregation/condensation protein ScpB GO:0051304 GYO_2554 15edc4821ed140b80644cd1b2f30551b 197 SUPERFAMILY SSF46785 87 160 3.33E-23 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily GYO_2554 15edc4821ed140b80644cd1b2f30551b 197 Gene3D G3DSA:1.10.10.10 3 85 1.4E-26 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily GYO_2554 15edc4821ed140b80644cd1b2f30551b 197 TIGRFAM TIGR00281 TIGR00281: segregation and condensation protein B 7 195 8.1E-81 T 14-10-2018 IPR005234 Chromosome segregation/condensation protein ScpB GO:0051304 GYO_0817 4c8e7076cc09e99f06dcc49d23caf4c7 885 Pfam PF03176 MMPL family 45 358 6.1E-76 T 14-10-2018 IPR004869 Membrane transport protein MMPL domain GO:0016020 GYO_0817 4c8e7076cc09e99f06dcc49d23caf4c7 885 Pfam PF03176 MMPL family 542 878 1.6E-49 T 14-10-2018 IPR004869 Membrane transport protein MMPL domain GO:0016020 GYO_0817 4c8e7076cc09e99f06dcc49d23caf4c7 885 SUPERFAMILY SSF82866 120 333 3.4E-33 T 14-10-2018 GYO_0817 4c8e7076cc09e99f06dcc49d23caf4c7 885 Gene3D G3DSA:1.20.1640.10 135 336 1.8E-9 T 14-10-2018 GYO_0817 4c8e7076cc09e99f06dcc49d23caf4c7 885 SUPERFAMILY SSF82866 673 877 2.22E-29 T 14-10-2018 GYO_0058 3c4ec80761c822268a64a5f97891deb7 97 SUPERFAMILY SSF160537 2 85 5.49E-33 T 14-10-2018 IPR036751 Stage V sporulation protein G superfamily GO:0030435 GYO_0058 3c4ec80761c822268a64a5f97891deb7 97 Hamap MF_00819 Putative septation protein SpoVG [spoVG]. 1 94 27.764 T 14-10-2018 IPR007170 Stage V sporulation protein G GO:0030435 GYO_0058 3c4ec80761c822268a64a5f97891deb7 97 Pfam PF04026 SpoVG 2 81 3.4E-35 T 14-10-2018 IPR007170 Stage V sporulation protein G GO:0030435 GYO_0058 3c4ec80761c822268a64a5f97891deb7 97 Gene3D G3DSA:3.30.1120.40 1 97 1.4E-40 T 14-10-2018 IPR036751 Stage V sporulation protein G superfamily GO:0030435 GYO_4099 18d4d656d831bfa73446559cf1e35954 320 TIGRFAM TIGR00629 uvde: UV damage endonuclease UvdE 1 303 4.5E-147 T 14-10-2018 IPR004601 UV-endonuclease UvdE GO:0004519|GO:0006289|GO:0009411 GYO_4099 18d4d656d831bfa73446559cf1e35954 320 Hamap MF_00606 UV DNA damage endonuclease [uvsE]. 12 304 41.769 T 14-10-2018 IPR023520 UV-endonuclease UvdE, bacterial GO:0004519|GO:0009411 GYO_4099 18d4d656d831bfa73446559cf1e35954 320 Pfam PF03851 UV-endonuclease UvdE 5 274 1.5E-120 T 14-10-2018 IPR004601 UV-endonuclease UvdE GO:0004519|GO:0006289|GO:0009411 GYO_4099 18d4d656d831bfa73446559cf1e35954 320 SUPERFAMILY SSF51658 61 276 4.15E-18 T 14-10-2018 IPR036237 Xylose isomerase-like superfamily GYO_4099 18d4d656d831bfa73446559cf1e35954 320 Gene3D G3DSA:3.20.20.150 2 308 2.5E-93 T 14-10-2018 GYO_3615 7d4a6142346b1eef226780794aced465 360 SUPERFAMILY SSF55874 225 343 1.31E-18 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily GYO_3615 7d4a6142346b1eef226780794aced465 360 SMART SM00387 253 346 2.0E-9 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase GYO_3615 7d4a6142346b1eef226780794aced465 360 Gene3D G3DSA:1.10.287.130 73 209 6.6E-5 T 14-10-2018 GYO_3615 7d4a6142346b1eef226780794aced465 360 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 255 343 1.6E-8 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase GYO_3615 7d4a6142346b1eef226780794aced465 360 SMART SM00304 74 126 7.4E-6 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 GYO_3615 7d4a6142346b1eef226780794aced465 360 Pfam PF07730 Histidine kinase 150 217 2.4E-18 T 14-10-2018 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 GYO_3615 7d4a6142346b1eef226780794aced465 360 Gene3D G3DSA:3.30.565.10 215 347 7.2E-33 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily GYO_3615 7d4a6142346b1eef226780794aced465 360 PIRSF PIRSF037431 7 352 8.6E-130 T 14-10-2018 IPR017202 Sensor histidine kinase LiaS/VraS GO:0000155|GO:0000160|GO:0004673|GO:0016021 GYO_3526 ac0cad2d3c1ba0d7eaec9778cc194852 298 Hamap MF_00206 Lipoyl synthase [lipA]. 1 295 148.391 T 14-10-2018 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 GYO_3526 ac0cad2d3c1ba0d7eaec9778cc194852 298 Pfam PF04055 Radical SAM superfamily 64 224 1.8E-13 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 GYO_3526 ac0cad2d3c1ba0d7eaec9778cc194852 298 SMART SM00729 57 265 2.8E-16 T 14-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 GYO_3526 ac0cad2d3c1ba0d7eaec9778cc194852 298 TIGRFAM TIGR00510 lipA: lipoyl synthase 3 293 5.3E-120 T 14-10-2018 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 GYO_3526 ac0cad2d3c1ba0d7eaec9778cc194852 298 Pfam PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family 3 45 1.3E-11 T 14-10-2018 IPR031691 Lipoyl synthase, N-terminal KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 GYO_3526 ac0cad2d3c1ba0d7eaec9778cc194852 298 SUPERFAMILY SSF102114 20 287 7.72E-63 T 14-10-2018 GYO_3526 ac0cad2d3c1ba0d7eaec9778cc194852 298 Gene3D G3DSA:3.20.20.70 13 266 3.6E-21 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 GYO_3526 ac0cad2d3c1ba0d7eaec9778cc194852 298 PIRSF PIRSF005963 2 298 2.9E-135 T 14-10-2018 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 GYO_3030 149b839ded2d78cbcdd3ee1ebc66e7d4 284 Pfam PF00800 Prephenate dehydratase 3 185 1.6E-54 T 14-10-2018 IPR001086 Prephenate dehydratase GO:0004664|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432 GYO_3030 149b839ded2d78cbcdd3ee1ebc66e7d4 284 PIRSF PIRSF001500 1 284 3.5E-68 T 14-10-2018 IPR008242 Bifunctional P-protein, chorismate mutase/prephenate dehydratase GO:0004106|GO:0004664|GO:0005737|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432 GYO_3030 149b839ded2d78cbcdd3ee1ebc66e7d4 284 SUPERFAMILY SSF53850 1 185 7.36E-52 T 14-10-2018 GYO_3030 149b839ded2d78cbcdd3ee1ebc66e7d4 284 SUPERFAMILY SSF55021 194 280 6.7E-23 T 14-10-2018 GYO_3030 149b839ded2d78cbcdd3ee1ebc66e7d4 284 Gene3D G3DSA:3.40.190.10 5 182 1.3E-53 T 14-10-2018 GYO_3030 149b839ded2d78cbcdd3ee1ebc66e7d4 284 Gene3D G3DSA:3.30.70.260 194 284 2.6E-25 T 14-10-2018 GYO_3030 149b839ded2d78cbcdd3ee1ebc66e7d4 284 ProSitePatterns PS00858 Prephenate dehydratase signature 2. 229 236 - T 14-10-2018 IPR018528 Prephenate dehydratase, conserved site GO:0004664|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432 GYO_3030 149b839ded2d78cbcdd3ee1ebc66e7d4 284 ProSitePatterns PS00857 Prephenate dehydratase signature 1. 159 181 - T 14-10-2018 IPR018528 Prephenate dehydratase, conserved site GO:0004664|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432 GYO_3030 149b839ded2d78cbcdd3ee1ebc66e7d4 284 Gene3D G3DSA:3.40.190.10 84 173 1.3E-53 T 14-10-2018 GYO_3030 149b839ded2d78cbcdd3ee1ebc66e7d4 284 Pfam PF01842 ACT domain 202 254 5.9E-7 T 14-10-2018 IPR002912 ACT domain GYO_0748 600ca42b1066fc8c25ce1bdcbb0fed24 181 Gene3D G3DSA:1.10.357.10 4 175 2.4E-46 T 14-10-2018 GYO_0748 600ca42b1066fc8c25ce1bdcbb0fed24 181 SUPERFAMILY SSF46689 5 71 2.1E-15 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 GYO_0748 600ca42b1066fc8c25ce1bdcbb0fed24 181 Pfam PF00440 Bacterial regulatory proteins, tetR family 18 60 3.6E-8 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 GYO_0748 600ca42b1066fc8c25ce1bdcbb0fed24 181 Pfam PF14278 Transcriptional regulator C-terminal region 87 159 1.4E-12 T 14-10-2018 IPR039532 Transcriptional regulator TetR, C-terminal, Firmicutes type GYO_1297 90ca83758cc395e529d14a9e56f6a250 145 Gene3D G3DSA:1.20.5.1170 117 145 2.1E-23 T 14-10-2018 GYO_1297 90ca83758cc395e529d14a9e56f6a250 145 Pfam PF01230 HIT domain 16 109 4.5E-29 T 14-10-2018 IPR001310 Histidine triad (HIT) protein GYO_1297 90ca83758cc395e529d14a9e56f6a250 145 ProSitePatterns PS00892 HIT domain signature. 89 107 - T 14-10-2018 IPR019808 Histidine triad, conserved site GYO_1297 90ca83758cc395e529d14a9e56f6a250 145 Gene3D G3DSA:3.30.428.10 1 115 2.9E-41 T 14-10-2018 IPR036265 HIT-like superfamily GYO_1297 90ca83758cc395e529d14a9e56f6a250 145 PRINTS PR00332 Histidine triad family signature 29 47 7.2E-18 T 14-10-2018 IPR001310 Histidine triad (HIT) protein GYO_1297 90ca83758cc395e529d14a9e56f6a250 145 PRINTS PR00332 Histidine triad family signature 96 106 7.2E-18 T 14-10-2018 IPR001310 Histidine triad (HIT) protein GYO_1297 90ca83758cc395e529d14a9e56f6a250 145 PRINTS PR00332 Histidine triad family signature 8 24 7.2E-18 T 14-10-2018 IPR001310 Histidine triad (HIT) protein GYO_1297 90ca83758cc395e529d14a9e56f6a250 145 SUPERFAMILY SSF54197 5 138 8.35E-47 T 14-10-2018 IPR036265 HIT-like superfamily GYO_4501 1e3f137d0dc576dafacd34af9141832b 311 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 13 23 4.6E-5 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 GYO_4501 1e3f137d0dc576dafacd34af9141832b 311 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 3 13 4.6E-5 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 GYO_4501 1e3f137d0dc576dafacd34af9141832b 311 Gene3D G3DSA:3.40.50.2300 162 277 1.9E-32 T 14-10-2018 GYO_4501 1e3f137d0dc576dafacd34af9141832b 311 SUPERFAMILY SSF53822 58 295 1.59E-39 T 14-10-2018 IPR028082 Periplasmic binding protein-like I GYO_4501 1e3f137d0dc576dafacd34af9141832b 311 Gene3D G3DSA:3.40.50.2300 65 292 1.9E-32 T 14-10-2018 GYO_4501 1e3f137d0dc576dafacd34af9141832b 311 ProSitePatterns PS00356 LacI-type HTH domain signature. 4 22 - T 14-10-2018 GYO_4501 1e3f137d0dc576dafacd34af9141832b 311 Pfam PF00532 Periplasmic binding proteins and sugar binding domain of LacI family 59 310 1.7E-70 T 14-10-2018 IPR001761 Periplasmic binding protein/LacI sugar binding domain GYO_4501 1e3f137d0dc576dafacd34af9141832b 311 SMART SM00354 1 71 4.1E-38 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 GYO_4501 1e3f137d0dc576dafacd34af9141832b 311 Gene3D G3DSA:1.10.260.40 1 59 1.3E-20 T 14-10-2018 GYO_4501 1e3f137d0dc576dafacd34af9141832b 311 SUPERFAMILY SSF47413 1 59 7.22E-18 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 GYO_4501 1e3f137d0dc576dafacd34af9141832b 311 Pfam PF00356 Bacterial regulatory proteins, lacI family 3 48 1.3E-21 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 GYO_2047 ec1d876162a4962d133ade2e1b741690 416 Gene3D G3DSA:3.40.980.10 5 174 1.3E-52 T 14-10-2018 IPR036425 MoaB/Mog-like domain superfamily GYO_2047 ec1d876162a4962d133ade2e1b741690 416 Gene3D G3DSA:3.90.950.20 250 414 2.8E-51 T 14-10-2018 IPR036653 CinA-like, C-terminal GYO_2047 ec1d876162a4962d133ade2e1b741690 416 TIGRFAM TIGR00199 PncC_domain: amidohydrolase, PncC family 267 411 1.9E-57 T 14-10-2018 IPR008136 CinA, C-terminal GYO_2047 ec1d876162a4962d133ade2e1b741690 416 SUPERFAMILY SSF142433 254 414 1.83E-48 T 14-10-2018 IPR036653 CinA-like, C-terminal GYO_2047 ec1d876162a4962d133ade2e1b741690 416 Hamap MF_00226_B Putative competence-damage inducible protein [cinA]. 1 416 168.68 T 14-10-2018 IPR008135 Competence-induced protein CinA GYO_2047 ec1d876162a4962d133ade2e1b741690 416 TIGRFAM TIGR00177 molyb_syn: molybdenum cofactor synthesis domain 6 170 2.2E-40 T 14-10-2018 IPR001453 MoaB/Mog domain GYO_2047 ec1d876162a4962d133ade2e1b741690 416 SMART SM00852 8 175 1.7E-44 T 14-10-2018 IPR001453 MoaB/Mog domain GYO_2047 ec1d876162a4962d133ade2e1b741690 416 Pfam PF00994 Probable molybdopterin binding domain 8 172 2.0E-35 T 14-10-2018 IPR001453 MoaB/Mog domain GYO_2047 ec1d876162a4962d133ade2e1b741690 416 PIRSF PIRSF006728 4 416 2.1E-169 T 14-10-2018 IPR008135 Competence-induced protein CinA GYO_2047 ec1d876162a4962d133ade2e1b741690 416 TIGRFAM TIGR00200 cinA_nterm: competence/damage-inducible protein CinA N-terminal domain 4 415 1.3E-212 T 14-10-2018 IPR008135 Competence-induced protein CinA GYO_2047 ec1d876162a4962d133ade2e1b741690 416 Pfam PF02464 Competence-damaged protein 261 412 1.5E-50 T 14-10-2018 IPR008136 CinA, C-terminal GYO_2047 ec1d876162a4962d133ade2e1b741690 416 SUPERFAMILY SSF53218 6 210 7.98E-42 T 14-10-2018 IPR036425 MoaB/Mog-like domain superfamily GYO_1255 308ea561af09b2ea6102c3031433787b 371 Pfam PF00924 Mechanosensitive ion channel 139 341 5.5E-65 T 14-10-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 GYO_1255 308ea561af09b2ea6102c3031433787b 371 ProSitePatterns PS01246 Uncharacterized protein family UPF0003 signature. 211 245 - T 14-10-2018 IPR006686 Mechanosensitive ion channel MscS, conserved site GO:0016020 GYO_1255 308ea561af09b2ea6102c3031433787b 371 Gene3D G3DSA:3.30.70.100 247 345 1.1E-15 T 14-10-2018 GYO_1255 308ea561af09b2ea6102c3031433787b 371 SUPERFAMILY SSF50182 181 247 2.42E-18 T 14-10-2018 IPR010920 LSM domain superfamily GYO_1255 308ea561af09b2ea6102c3031433787b 371 SUPERFAMILY SSF82861 97 180 3.92E-11 T 14-10-2018 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 GYO_1255 308ea561af09b2ea6102c3031433787b 371 SUPERFAMILY SSF82689 248 352 1.03E-15 T 14-10-2018 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 GYO_1255 308ea561af09b2ea6102c3031433787b 371 Gene3D G3DSA:2.30.30.60 197 246 5.9E-14 T 14-10-2018 IPR023408 Mechanosensitive ion channel MscS domain superfamily GYO_1360 987bba3db70d3ca9960551b5868e3764 329 Pfam PF13377 Periplasmic binding protein-like domain 169 329 5.4E-36 T 14-10-2018 GYO_1360 987bba3db70d3ca9960551b5868e3764 329 SUPERFAMILY SSF47413 1 59 2.76E-18 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 GYO_1360 987bba3db70d3ca9960551b5868e3764 329 SUPERFAMILY SSF53822 60 329 5.07E-71 T 14-10-2018 IPR028082 Periplasmic binding protein-like I GYO_1360 987bba3db70d3ca9960551b5868e3764 329 Gene3D G3DSA:1.10.260.40 3 59 1.5E-21 T 14-10-2018 GYO_1360 987bba3db70d3ca9960551b5868e3764 329 Pfam PF00356 Bacterial regulatory proteins, lacI family 3 48 8.5E-19 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 GYO_1360 987bba3db70d3ca9960551b5868e3764 329 SMART SM00354 1 71 4.3E-30 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 GYO_1360 987bba3db70d3ca9960551b5868e3764 329 Gene3D G3DSA:3.40.50.2300 159 288 1.7E-64 T 14-10-2018 GYO_1360 987bba3db70d3ca9960551b5868e3764 329 Gene3D G3DSA:3.40.50.2300 62 304 1.7E-64 T 14-10-2018 GYO_4055 7f27328c482bb0401bc0ffc8ebcdec95 473 SUPERFAMILY SSF50615 2 82 8.11E-27 T 14-10-2018 IPR036121 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamily GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 GYO_4055 7f27328c482bb0401bc0ffc8ebcdec95 473 SMART SM00382 150 335 1.1E-6 T 14-10-2018 IPR003593 AAA+ ATPase domain GYO_4055 7f27328c482bb0401bc0ffc8ebcdec95 473 Hamap MF_01347 ATP synthase subunit beta [atpB]. 1 469 57.647 T 14-10-2018 IPR005722 ATP synthase, F1 complex, beta subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-2151201|Reactome: R-HSA-8949613 GYO_4055 7f27328c482bb0401bc0ffc8ebcdec95 473 SUPERFAMILY SSF47917 354 469 7.32E-52 T 14-10-2018 GYO_4055 7f27328c482bb0401bc0ffc8ebcdec95 473 TIGRFAM TIGR01039 atpD: ATP synthase F1, beta subunit 3 469 1.9E-260 T 14-10-2018 IPR005722 ATP synthase, F1 complex, beta subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-2151201|Reactome: R-HSA-8949613 GYO_4055 7f27328c482bb0401bc0ffc8ebcdec95 473 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 138 351 1.5E-66 T 14-10-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 GYO_4055 7f27328c482bb0401bc0ffc8ebcdec95 473 SUPERFAMILY SSF52540 84 354 2.3E-87 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase GYO_4055 7f27328c482bb0401bc0ffc8ebcdec95 473 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 342 351 - T 14-10-2018 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 GYO_4055 7f27328c482bb0401bc0ffc8ebcdec95 473 Gene3D G3DSA:1.10.1140.10 354 472 5.1E-57 T 14-10-2018 IPR024034 ATPase, F1/V1 complex, beta/alpha subunit, C-terminal KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 GYO_4055 7f27328c482bb0401bc0ffc8ebcdec95 473 Gene3D G3DSA:3.40.50.300 84 352 1.9E-113 T 14-10-2018 GYO_4055 7f27328c482bb0401bc0ffc8ebcdec95 473 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 6 80 3.0E-23 T 14-10-2018 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 GYO_4055 7f27328c482bb0401bc0ffc8ebcdec95 473 Gene3D G3DSA:2.40.10.170 1 82 1.1E-31 T 14-10-2018 GYO_1940 34df9a659c3197343e2dc513282a129c 317 PIRSF PIRSF000446 1 311 7.0E-140 T 14-10-2018 IPR024925 Malonyl CoA-acyl carrier protein transacylase KEGG: 00061+2.3.1.39|MetaCyc: PWY-4381|MetaCyc: PWY-6799|MetaCyc: PWY-7388 GYO_1940 34df9a659c3197343e2dc513282a129c 317 TIGRFAM TIGR00128 fabD: malonyl CoA-acyl carrier protein transacylase 3 291 1.6E-131 T 14-10-2018 IPR004410 Malonyl CoA-acyl carrier protein transacylase, FabD-type GO:0004314 KEGG: 00061+2.3.1.39|MetaCyc: PWY-4381|MetaCyc: PWY-6799|MetaCyc: PWY-7388 GYO_1940 34df9a659c3197343e2dc513282a129c 317 Gene3D G3DSA:3.30.70.250 126 199 1.2E-100 T 14-10-2018 GYO_1940 34df9a659c3197343e2dc513282a129c 317 SUPERFAMILY SSF52151 4 310 4.71E-80 T 14-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GYO_1940 34df9a659c3197343e2dc513282a129c 317 Gene3D G3DSA:3.40.366.10 6 286 1.2E-100 T 14-10-2018 IPR001227 Acyl transferase domain superfamily GO:0016740 GYO_1940 34df9a659c3197343e2dc513282a129c 317 SMART SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. 7 314 2.3E-41 T 14-10-2018 IPR020801 Polyketide synthase, acyl transferase domain GYO_1940 34df9a659c3197343e2dc513282a129c 317 SUPERFAMILY SSF55048 128 193 2.22E-15 T 14-10-2018 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding GYO_1940 34df9a659c3197343e2dc513282a129c 317 Pfam PF00698 Acyl transferase domain 6 290 1.2E-44 T 14-10-2018 IPR014043 Acyl transferase GYO_0091 4536700dd4904186aa675d0a3182c6e7 258 ProSitePatterns PS00793 Dihydropteroate synthase signature 2. 34 47 - T 14-10-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 GYO_0091 4536700dd4904186aa675d0a3182c6e7 258 TIGRFAM TIGR01496 DHPS: dihydropteroate synthase 1 249 4.9E-102 T 14-10-2018 IPR006390 Dihydropteroate synthase GO:0004156|GO:0009396 KEGG: 00790+2.5.1.15|MetaCyc: PWY-6614 GYO_0091 4536700dd4904186aa675d0a3182c6e7 258 Pfam PF00809 Pterin binding enzyme 1 234 2.9E-90 T 14-10-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 GYO_0091 4536700dd4904186aa675d0a3182c6e7 258 Gene3D G3DSA:3.20.20.20 1 255 1.6E-110 T 14-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 GYO_0091 4536700dd4904186aa675d0a3182c6e7 258 SUPERFAMILY SSF51717 1 251 5.76E-99 T 14-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 GYO_0552 87852acb83ab371c7ff06735aa1fae19 113 Pfam PF11345 Protein of unknown function (DUF3147) 27 100 5.3E-5 T 14-10-2018 IPR021493 Protein of unknown function DUF3147 GYO_1805 4f5f9b254188392123a08236f03bb82f 88 Hamap MF_01041 UPF0223 protein . 1 88 26.33 T 14-10-2018 IPR007920 Protein of unknown function UPF0223 GYO_1805 4f5f9b254188392123a08236f03bb82f 88 Pfam PF05256 Uncharacterised protein family (UPF0223) 2 87 6.8E-38 T 14-10-2018 IPR007920 Protein of unknown function UPF0223 GYO_1805 4f5f9b254188392123a08236f03bb82f 88 Gene3D G3DSA:1.10.220.80 12 88 1.6E-30 T 14-10-2018 IPR023324 BH2638-like superfamily GYO_1805 4f5f9b254188392123a08236f03bb82f 88 ProDom PD062738 UPF0223 FAMILY UNCHARACTERISED CYTOSOLIC SUPERFAMILY YKTA LMO1058/LIN1050 INOSITOL MW0980 M6_SPY0948 1 88 4.0E-45 T 14-10-2018 IPR007920 Protein of unknown function UPF0223 GYO_1805 4f5f9b254188392123a08236f03bb82f 88 PIRSF PIRSF037260 1 88 1.1E-39 T 14-10-2018 IPR007920 Protein of unknown function UPF0223 GYO_1805 4f5f9b254188392123a08236f03bb82f 88 SUPERFAMILY SSF158504 4 87 7.85E-34 T 14-10-2018 IPR023324 BH2638-like superfamily GYO_1902 706796fad95f59c18f0ed08b53b0cdcd 256 SUPERFAMILY SSF63380 3 99 2.87E-21 T 14-10-2018 IPR017938 Riboflavin synthase-like beta-barrel GYO_1902 706796fad95f59c18f0ed08b53b0cdcd 256 Pfam PF00175 Oxidoreductase NAD-binding domain 112 202 1.5E-5 T 14-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 GYO_1902 706796fad95f59c18f0ed08b53b0cdcd 256 Gene3D G3DSA:2.40.30.10 2 97 4.6E-28 T 14-10-2018 GYO_1902 706796fad95f59c18f0ed08b53b0cdcd 256 Gene3D G3DSA:3.40.50.80 102 214 1.1E-24 T 14-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain GYO_1902 706796fad95f59c18f0ed08b53b0cdcd 256 Gene3D G3DSA:2.10.240.10 215 256 4.7E-20 T 14-10-2018 IPR037117 Dihydroorotate dehydrogenase, electron transfer subunit, Fe-S binding domain superfamily GYO_1902 706796fad95f59c18f0ed08b53b0cdcd 256 Hamap MF_01211 Dihydroorotate dehydrogenase B (NAD(+)), electron transfer subunit [pyrK]. 3 256 38.394 T 14-10-2018 IPR023455 Dihydroorotate dehydrogenase electron transfer subunit GYO_1902 706796fad95f59c18f0ed08b53b0cdcd 256 Pfam PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B 215 254 6.0E-17 T 14-10-2018 IPR019480 Dihydroorotate dehydrogenase, electron transfer subunit, iron-sulphur cluster binding domain GYO_1902 706796fad95f59c18f0ed08b53b0cdcd 256 SUPERFAMILY SSF52343 94 255 1.7E-32 T 14-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain GYO_1902 706796fad95f59c18f0ed08b53b0cdcd 256 PIRSF PIRSF006816 1 256 1.3E-71 T 14-10-2018 IPR012165 Cytochrome-c3 hydrogenase, gamma subunit GO:0006221|GO:0050660|GO:0051537 GYO_2714 8548772c01d632cc9313c6527adea05d 126 SMART SM00450 29 124 5.2E-33 T 14-10-2018 IPR001763 Rhodanese-like domain GYO_2714 8548772c01d632cc9313c6527adea05d 126 SUPERFAMILY SSF52821 5 119 2.62E-35 T 14-10-2018 IPR036873 Rhodanese-like domain superfamily GYO_2714 8548772c01d632cc9313c6527adea05d 126 Gene3D G3DSA:3.40.250.10 30 126 8.7E-31 T 14-10-2018 IPR036873 Rhodanese-like domain superfamily GYO_2714 8548772c01d632cc9313c6527adea05d 126 Pfam PF00581 Rhodanese-like domain 41 119 4.3E-20 T 14-10-2018 IPR001763 Rhodanese-like domain GYO_4466 2928ae576c05a5979d7696e7846e4713 402 SUPERFAMILY SSF103473 8 388 1.01E-50 T 14-10-2018 IPR036259 MFS transporter superfamily GYO_4466 2928ae576c05a5979d7696e7846e4713 402 Gene3D G3DSA:1.20.1250.20 5 198 2.4E-20 T 14-10-2018 GYO_4466 2928ae576c05a5979d7696e7846e4713 402 Pfam PF07690 Major Facilitator Superfamily 20 228 5.2E-19 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 GYO_4466 2928ae576c05a5979d7696e7846e4713 402 TIGRFAM TIGR00896 CynX: cyanate transporter 14 368 2.5E-155 T 14-10-2018 IPR004747 Cyanate transport system protein GO:0016021 GYO_4466 2928ae576c05a5979d7696e7846e4713 402 Gene3D G3DSA:1.20.1250.20 199 386 1.1E-22 T 14-10-2018 GYO_3268 e3c2da4edf4ccc0126f6e9994359fdd8 335 Hamap MF_01694 Biotin synthase [bioB]. 15 322 41.458 T 14-10-2018 IPR002684 Biotin synthase/Biotin biosynthesis bifunctional protein BioAB GO:0004076|GO:0009102 KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 GYO_3268 e3c2da4edf4ccc0126f6e9994359fdd8 335 Pfam PF06968 Biotin and Thiamin Synthesis associated domain 231 320 5.7E-15 T 14-10-2018 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 GYO_3268 e3c2da4edf4ccc0126f6e9994359fdd8 335 TIGRFAM TIGR00433 bioB: biotin synthase 27 320 4.4E-120 T 14-10-2018 IPR002684 Biotin synthase/Biotin biosynthesis bifunctional protein BioAB GO:0004076|GO:0009102 KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 GYO_3268 e3c2da4edf4ccc0126f6e9994359fdd8 335 Gene3D G3DSA:3.20.20.70 16 324 7.0E-108 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 GYO_3268 e3c2da4edf4ccc0126f6e9994359fdd8 335 Pfam PF04055 Radical SAM superfamily 65 220 9.2E-17 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 GYO_3268 e3c2da4edf4ccc0126f6e9994359fdd8 335 SUPERFAMILY SSF102114 16 320 1.37E-70 T 14-10-2018 GYO_3268 e3c2da4edf4ccc0126f6e9994359fdd8 335 PIRSF PIRSF001619 1 328 9.2E-129 T 14-10-2018 IPR024177 Biotin synthase KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 GYO_3268 e3c2da4edf4ccc0126f6e9994359fdd8 335 SMART SM00876 231 321 4.2E-34 T 14-10-2018 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 GYO_3268 e3c2da4edf4ccc0126f6e9994359fdd8 335 SMART SM00729 55 263 1.2E-34 T 14-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 GYO_0629 c56c989afe75150fddce8392cdbb2be9 213 Pfam PF00657 GDSL-like Lipase/Acylhydrolase 5 201 1.2E-18 T 14-10-2018 IPR001087 GDSL lipase/esterase GO:0016788 GYO_0629 c56c989afe75150fddce8392cdbb2be9 213 SUPERFAMILY SSF52266 4 204 7.61E-24 T 14-10-2018 GYO_0629 c56c989afe75150fddce8392cdbb2be9 213 Gene3D G3DSA:3.40.50.1110 2 205 6.3E-25 T 14-10-2018 IPR036514 SGNH hydrolase superfamily GYO_3216 c09dc5c6179a3774ee5c1e400cf4ae7d 572 SUPERFAMILY SSF56801 15 562 4.58E-161 T 14-10-2018 GYO_3216 c09dc5c6179a3774ee5c1e400cf4ae7d 572 Gene3D G3DSA:3.30.300.30 458 571 4.8E-27 T 14-10-2018 GYO_3216 c09dc5c6179a3774ee5c1e400cf4ae7d 572 Gene3D G3DSA:3.40.50.12780 15 455 9.9E-119 T 14-10-2018 GYO_3216 c09dc5c6179a3774ee5c1e400cf4ae7d 572 Pfam PF00501 AMP-binding enzyme 51 462 9.6E-95 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 GYO_3216 c09dc5c6179a3774ee5c1e400cf4ae7d 572 ProSitePatterns PS00455 Putative AMP-binding domain signature. 211 222 - T 14-10-2018 IPR020845 AMP-binding, conserved site GYO_3216 c09dc5c6179a3774ee5c1e400cf4ae7d 572 Pfam PF13193 AMP-binding enzyme C-terminal domain 471 549 6.4E-24 T 14-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain GYO_3133 66d6f1b39bb9244bd95c8c42c4c82b99 361 Gene3D G3DSA:2.40.30.40 77 164 3.9E-141 T 14-10-2018 IPR023367 Peptidase M42, domain 2 GYO_3133 66d6f1b39bb9244bd95c8c42c4c82b99 361 SUPERFAMILY SSF53187 6 358 1.41E-74 T 14-10-2018 GYO_3133 66d6f1b39bb9244bd95c8c42c4c82b99 361 PIRSF PIRSF001123 4 361 7.0E-150 T 14-10-2018 IPR008007 Peptidase M42 GYO_3133 66d6f1b39bb9244bd95c8c42c4c82b99 361 SUPERFAMILY SSF101821 73 182 8.24E-35 T 14-10-2018 GYO_3133 66d6f1b39bb9244bd95c8c42c4c82b99 361 Pfam PF05343 M42 glutamyl aminopeptidase 48 342 8.8E-118 T 14-10-2018 IPR008007 Peptidase M42 GYO_3133 66d6f1b39bb9244bd95c8c42c4c82b99 361 Gene3D G3DSA:3.40.630.10 12 345 3.9E-141 T 14-10-2018 GYO_0448 fd307e93f52f6338a9db3df806d34c5a 455 TIGRFAM TIGR03247 glucar-dehydr: glucarate dehydratase 16 455 9.9E-272 T 14-10-2018 IPR017653 Glucarate dehydratase GO:0000287|GO:0008872|GO:0019394 KEGG: 00053+4.2.1.40|MetaCyc: PWY-6499 GYO_0448 fd307e93f52f6338a9db3df806d34c5a 455 Gene3D G3DSA:3.30.390.10 20 423 9.8E-182 T 14-10-2018 IPR029017 Enolase-like, N-terminal GYO_0448 fd307e93f52f6338a9db3df806d34c5a 455 SUPERFAMILY SSF54826 18 147 5.72E-32 T 14-10-2018 GYO_0448 fd307e93f52f6338a9db3df806d34c5a 455 SMART SM00922 195 295 3.9E-16 T 14-10-2018 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal GYO_0448 fd307e93f52f6338a9db3df806d34c5a 455 Pfam PF13378 Enolase C-terminal domain-like 198 415 8.4E-38 T 14-10-2018 IPR029065 Enolase C-terminal domain-like GYO_0448 fd307e93f52f6338a9db3df806d34c5a 455 SUPERFAMILY SSF51604 149 425 8.04E-86 T 14-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily GYO_0448 fd307e93f52f6338a9db3df806d34c5a 455 Gene3D G3DSA:3.20.20.120 149 409 9.8E-182 T 14-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily GYO_2347 2840c98d5d007dd168969c4b48485a31 282 Pfam PF01740 STAS domain 175 271 1.3E-14 T 14-10-2018 IPR002645 STAS domain GYO_2347 2840c98d5d007dd168969c4b48485a31 282 SUPERFAMILY SSF52091 165 270 9.81E-16 T 14-10-2018 IPR036513 STAS domain superfamily GYO_2347 2840c98d5d007dd168969c4b48485a31 282 Gene3D G3DSA:3.30.750.24 163 281 1.0E-32 T 14-10-2018 IPR036513 STAS domain superfamily GYO_4238 b3dab4c74cfb0ce9e2fb3f819bcbb02d 459 Pfam PF00367 phosphotransferase system, EIIB 7 40 1.5E-13 T 14-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 GYO_4238 b3dab4c74cfb0ce9e2fb3f819bcbb02d 459 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 18 35 - T 14-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 GYO_4238 b3dab4c74cfb0ce9e2fb3f819bcbb02d 459 Gene3D G3DSA:3.30.1360.60 2 77 2.2E-22 T 14-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 GYO_4238 b3dab4c74cfb0ce9e2fb3f819bcbb02d 459 Pfam PF02378 Phosphotransferase system, EIIC 109 395 7.3E-44 T 14-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 GYO_4238 b3dab4c74cfb0ce9e2fb3f819bcbb02d 459 SUPERFAMILY SSF55604 5 79 1.28E-17 T 14-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 GYO_4238 b3dab4c74cfb0ce9e2fb3f819bcbb02d 459 TIGRFAM TIGR01996 PTS-II-BC-sucr: PTS system, sucrose-specific IIBC component 3 451 5.7E-182 T 14-10-2018 IPR010973 Phosphotransferase system, sucrose-specific IIBC component GO:0008982|GO:0009401|GO:0016021 GYO_0612 dd7e4948c06a7076b74d13119c810cb2 541 SUPERFAMILY SSF81296 23 120 2.17E-22 T 14-10-2018 IPR014756 Immunoglobulin E-set GYO_0612 dd7e4948c06a7076b74d13119c810cb2 541 Pfam PF04234 CopC domain 24 120 6.1E-20 T 14-10-2018 IPR007348 CopC domain GO:0005507|GO:0042597|GO:0046688 GYO_0612 dd7e4948c06a7076b74d13119c810cb2 541 Pfam PF05425 Copper resistance protein D 328 419 4.9E-16 T 14-10-2018 IPR008457 Copper resistance protein D GO:0016021 GYO_0612 dd7e4948c06a7076b74d13119c810cb2 541 Gene3D G3DSA:2.60.40.1220 24 125 9.6E-25 T 14-10-2018 GYO_0612 dd7e4948c06a7076b74d13119c810cb2 541 Pfam PF13115 YtkA-like 452 524 1.2E-6 T 14-10-2018 IPR032693 YtkA-like domain GYO_2900 daae3bcb8c1aed32ea0519ede1d25e45 44 SUPERFAMILY SSF52038 1 41 1.44E-7 T 14-10-2018 IPR035905 Barstar-like superfamily GYO_2900 daae3bcb8c1aed32ea0519ede1d25e45 44 Pfam PF01337 Barstar (barnase inhibitor) 4 37 3.7E-5 T 14-10-2018 IPR000468 Barstar (barnase inhibitor) GYO_2900 daae3bcb8c1aed32ea0519ede1d25e45 44 Gene3D G3DSA:3.30.370.10 1 44 3.0E-7 T 14-10-2018 IPR035905 Barstar-like superfamily GYO_0346 dc1a0669f1e1310c0bb32547811c9e8e 422 PIRSF PIRSF000521 4 145 1.8E-8 T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 GYO_0346 dc1a0669f1e1310c0bb32547811c9e8e 422 PIRSF PIRSF000521 119 421 4.6E-35 T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 GYO_0346 dc1a0669f1e1310c0bb32547811c9e8e 422 SUPERFAMILY SSF53383 14 420 1.14E-108 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase GYO_0346 dc1a0669f1e1310c0bb32547811c9e8e 422 Gene3D G3DSA:3.90.1150.10 24 408 2.5E-124 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 GYO_0346 dc1a0669f1e1310c0bb32547811c9e8e 422 Gene3D G3DSA:3.40.640.10 53 316 2.5E-124 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 GYO_0346 dc1a0669f1e1310c0bb32547811c9e8e 422 Pfam PF00202 Aminotransferase class-III 19 416 7.2E-95 T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 GYO_1336 37fa623c5a4a62d09b6eba3440b2be35 193 SMART SM00855 3 146 5.0E-23 T 14-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 GYO_1336 37fa623c5a4a62d09b6eba3440b2be35 193 Gene3D G3DSA:3.40.50.1240 1 193 6.3E-55 T 14-10-2018 IPR029033 Histidine phosphatase superfamily GYO_1336 37fa623c5a4a62d09b6eba3440b2be35 193 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 4 184 7.5E-52 T 14-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 GYO_1336 37fa623c5a4a62d09b6eba3440b2be35 193 ProSitePatterns PS00175 Phosphoglycerate mutase family phosphohistidine signature. 6 15 - T 14-10-2018 IPR001345 Phosphoglycerate/bisphosphoglycerate mutase, active site GO:0003824 GYO_1336 37fa623c5a4a62d09b6eba3440b2be35 193 SUPERFAMILY SSF53254 1 190 2.5E-55 T 14-10-2018 IPR029033 Histidine phosphatase superfamily GYO_1336 37fa623c5a4a62d09b6eba3440b2be35 193 PIRSF PIRSF000709 2 186 7.8E-11 T 14-10-2018 GYO_0546 0a34fb25ded59db2ee583dc8817fb1f9 283 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 68 81 - T 14-10-2018 IPR018313 Solute-binding protein family 3, conserved site GYO_0546 0a34fb25ded59db2ee583dc8817fb1f9 283 SMART SM00062 42 268 2.2E-70 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF GYO_0546 0a34fb25ded59db2ee583dc8817fb1f9 283 SUPERFAMILY SSF53850 7 266 1.58E-54 T 14-10-2018 GYO_0546 0a34fb25ded59db2ee583dc8817fb1f9 283 Gene3D G3DSA:3.40.190.10 41 263 1.3E-79 T 14-10-2018 GYO_0546 0a34fb25ded59db2ee583dc8817fb1f9 283 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 43 266 8.4E-53 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF GYO_0546 0a34fb25ded59db2ee583dc8817fb1f9 283 Gene3D G3DSA:3.40.190.10 129 230 1.3E-79 T 14-10-2018 GYO_2630 63a8238108441ee1a42003819215f515 489 SUPERFAMILY SSF55347 183 487 4.58E-116 T 14-10-2018 GYO_2630 63a8238108441ee1a42003819215f515 489 SUPERFAMILY SSF51735 7 185 2.17E-59 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily GYO_2630 63a8238108441ee1a42003819215f515 489 Pfam PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain 191 486 3.3E-114 T 14-10-2018 IPR022675 Glucose-6-phosphate dehydrogenase, C-terminal GO:0004345|GO:0006006|GO:0050661|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 GYO_2630 63a8238108441ee1a42003819215f515 489 Hamap MF_00966 Glucose-6-phosphate 1-dehydrogenase [zwf]. 8 488 92.035 T 14-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 GYO_2630 63a8238108441ee1a42003819215f515 489 Gene3D G3DSA:3.40.50.720 5 176 7.2E-59 T 14-10-2018 GYO_2630 63a8238108441ee1a42003819215f515 489 Pfam PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain 12 188 2.5E-61 T 14-10-2018 IPR022674 Glucose-6-phosphate dehydrogenase, NAD-binding GO:0004345|GO:0006006|GO:0050661|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 GYO_2630 63a8238108441ee1a42003819215f515 489 ProSitePatterns PS00069 Glucose-6-phosphate dehydrogenase active site. 178 184 - T 14-10-2018 IPR019796 Glucose-6-phosphate dehydrogenase, active site GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 GYO_2630 63a8238108441ee1a42003819215f515 489 Gene3D G3DSA:3.30.360.10 177 488 1.0E-124 T 14-10-2018 GYO_2630 63a8238108441ee1a42003819215f515 489 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 220 237 4.0E-47 T 14-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 GYO_2630 63a8238108441ee1a42003819215f515 489 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 144 157 4.0E-47 T 14-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 GYO_2630 63a8238108441ee1a42003819215f515 489 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 329 355 4.0E-47 T 14-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 GYO_2630 63a8238108441ee1a42003819215f515 489 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 168 196 4.0E-47 T 14-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 GYO_2630 63a8238108441ee1a42003819215f515 489 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 238 254 4.0E-47 T 14-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 GYO_2630 63a8238108441ee1a42003819215f515 489 TIGRFAM TIGR00871 zwf: glucose-6-phosphate dehydrogenase 8 488 9.4E-212 T 14-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 GYO_2630 63a8238108441ee1a42003819215f515 489 PIRSF PIRSF000110 1 489 1.3E-188 T 14-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 GYO_1894 e85cc00e6f119d0d68215357ecdb9929 159 Hamap MF_00161 Lipoprotein signal peptidase [lspA]. 2 150 16.212 T 14-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 GYO_1894 e85cc00e6f119d0d68215357ecdb9929 159 Pfam PF01252 Signal peptidase (SPase) II 6 144 5.1E-38 T 14-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 GYO_1894 e85cc00e6f119d0d68215357ecdb9929 159 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 89 104 7.4E-18 T 14-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 GYO_1894 e85cc00e6f119d0d68215357ecdb9929 159 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 45 53 7.4E-18 T 14-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 GYO_1894 e85cc00e6f119d0d68215357ecdb9929 159 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 125 141 7.4E-18 T 14-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 GYO_1894 e85cc00e6f119d0d68215357ecdb9929 159 ProSitePatterns PS00855 Signal peptidases II signature. 92 104 - T 14-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 GYO_1894 e85cc00e6f119d0d68215357ecdb9929 159 TIGRFAM TIGR00077 lspA: signal peptidase II 2 153 5.4E-57 T 14-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 GYO_3791 e3d7759a15c6494a21f95178896730c0 757 Gene3D G3DSA:1.50.10.10 313 677 2.0E-140 T 14-10-2018 IPR012341 Six-hairpin glycosidase-like superfamily GO:0003824 GYO_3791 e3d7759a15c6494a21f95178896730c0 757 Pfam PF03632 Glycosyl hydrolase family 65 central catalytic domain 319 692 8.1E-159 T 14-10-2018 IPR005195 Glycoside hydrolase, family 65, central catalytic GO:0003824|GO:0005975 GYO_3791 e3d7759a15c6494a21f95178896730c0 757 Pfam PF03636 Glycosyl hydrolase family 65, N-terminal domain 16 263 2.9E-56 T 14-10-2018 IPR005196 Glycoside hydrolase, family 65, N-terminal GO:0003824|GO:0005975 GYO_3791 e3d7759a15c6494a21f95178896730c0 757 Pfam PF03633 Glycosyl hydrolase family 65, C-terminal domain 696 746 7.4E-14 T 14-10-2018 IPR005194 Glycoside hydrolase family 65, C-terminal GYO_3791 e3d7759a15c6494a21f95178896730c0 757 SUPERFAMILY SSF48208 268 738 3.17E-141 T 14-10-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 GYO_3791 e3d7759a15c6494a21f95178896730c0 757 Gene3D G3DSA:2.70.98.40 3 266 1.9E-84 T 14-10-2018 IPR037018 Glycoside hydrolase family 65, N-terminal domain superfamily GYO_3791 e3d7759a15c6494a21f95178896730c0 757 PIRSF PIRSF036289 1 756 3.1E-277 T 14-10-2018 IPR017045 Maltose phosphorylase/glycosyl hydrolase/vacuolar acid trehalase GYO_3791 e3d7759a15c6494a21f95178896730c0 757 SUPERFAMILY SSF74650 4 264 9.1E-84 T 14-10-2018 IPR011013 Galactose mutarotase-like domain superfamily GO:0003824|GO:0005975|GO:0030246 GYO_3791 e3d7759a15c6494a21f95178896730c0 757 Gene3D G3DSA:2.60.420.10 678 747 3.9E-21 T 14-10-2018 GYO_0353 28a847fb9d04299c811c2b2936c391da 334 Pfam PF01032 FecCD transport family 18 327 6.1E-86 T 14-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 GYO_0353 28a847fb9d04299c811c2b2936c391da 334 Gene3D G3DSA:1.10.3470.10 4 333 4.3E-86 T 14-10-2018 IPR037294 ABC transporter, BtuC-like GYO_0353 28a847fb9d04299c811c2b2936c391da 334 SUPERFAMILY SSF81345 4 327 1.83E-78 T 14-10-2018 IPR037294 ABC transporter, BtuC-like GYO_0956 e4fd40fe8ed46a936a72cdcdbc32ceff 368 Gene3D G3DSA:1.10.10.60 254 306 1.9E-12 T 14-10-2018 GYO_0956 e4fd40fe8ed46a936a72cdcdbc32ceff 368 SMART SM00342 277 359 7.7E-25 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 GYO_0956 e4fd40fe8ed46a936a72cdcdbc32ceff 368 SMART SM00448 2 116 6.9E-25 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 GYO_0956 e4fd40fe8ed46a936a72cdcdbc32ceff 368 SUPERFAMILY SSF52172 1 134 1.99E-31 T 14-10-2018 IPR011006 CheY-like superfamily GYO_0956 e4fd40fe8ed46a936a72cdcdbc32ceff 368 Gene3D G3DSA:1.10.10.60 307 363 6.0E-17 T 14-10-2018 GYO_0956 e4fd40fe8ed46a936a72cdcdbc32ceff 368 Pfam PF12833 Helix-turn-helix domain 283 360 2.2E-18 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 GYO_0956 e4fd40fe8ed46a936a72cdcdbc32ceff 368 Pfam PF00072 Response regulator receiver domain 4 116 1.0E-24 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 GYO_0956 e4fd40fe8ed46a936a72cdcdbc32ceff 368 SUPERFAMILY SSF46689 310 361 2.02E-8 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 GYO_0956 e4fd40fe8ed46a936a72cdcdbc32ceff 368 Gene3D G3DSA:3.40.50.2300 1 140 3.2E-33 T 14-10-2018 GYO_2163 e8c2dbe0a74c4290d5b81b131c896414 160 PIRSF PIRSF021441 1 159 9.2E-70 T 14-10-2018 IPR031306 CcdC protein GYO_2163 e8c2dbe0a74c4290d5b81b131c896414 160 Pfam PF07301 Protein of unknown function (DUF1453) 5 148 1.1E-58 T 14-10-2018 IPR009916 Protein of unknown function DUF1453 GYO_1861 8d1b24e1e274478a4d218f8d82bf9c88 117 TIGRFAM TIGR02209 ftsL_broad: cell division protein FtsL 34 116 1.8E-24 T 14-10-2018 IPR011922 Cell division protein FtsL GO:0016021|GO:0051301 GYO_1861 8d1b24e1e274478a4d218f8d82bf9c88 117 Hamap MF_00910 Cell division protein FtsL [ftsL]. 34 116 14.679 T 14-10-2018 IPR011922 Cell division protein FtsL GO:0016021|GO:0051301 GYO_4076 e157d17c348073ddde33785088fef2a1 288 TIGRFAM TIGR03534 RF_mod_PrmC: protein-(glutamine-N5) methyltransferase, release factor-specific 25 280 1.3E-81 T 14-10-2018 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific GO:0008168 GYO_4076 e157d17c348073ddde33785088fef2a1 288 Gene3D G3DSA:3.40.50.150 85 286 1.9E-61 T 14-10-2018 GYO_4076 e157d17c348073ddde33785088fef2a1 288 SUPERFAMILY SSF53335 3 278 1.08E-48 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase GYO_4076 e157d17c348073ddde33785088fef2a1 288 TIGRFAM TIGR00536 hemK_fam: methyltransferase, HemK family 2 286 2.5E-99 T 14-10-2018 IPR004556 Modification methylase HemK GO:0006479|GO:0008276 GYO_4076 e157d17c348073ddde33785088fef2a1 288 Gene3D G3DSA:1.10.8.10 3 84 5.8E-17 T 14-10-2018 GYO_4076 e157d17c348073ddde33785088fef2a1 288 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 187 193 - T 14-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 GYO_4076 e157d17c348073ddde33785088fef2a1 288 Pfam PF05175 Methyltransferase small domain 112 222 2.7E-16 T 14-10-2018 IPR007848 Methyltransferase small domain GO:0008168 GYO_4076 e157d17c348073ddde33785088fef2a1 288 Hamap MF_02126 Release factor glutamine methyltransferase [prmC]. 4 284 43.947 T 14-10-2018 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific GO:0008168 GYO_1522 8b31038d018da4ed59600cd7283422b0 191 Pfam PF14172 Domain of unknown function (DUF4309) 51 188 6.4E-30 T 14-10-2018 IPR025453 Protein of unknown function DUF4309 GYO_2927 6a668cb941f1feac7d408c5b9ddada53 122 Pfam PF07875 Coat F domain 19 80 2.0E-16 T 14-10-2018 IPR012851 Spore coat protein CotF-like GYO_0563 88f96a57e89bba7ee7edd45a2c937ad2 3583 SUPERFAMILY SSF52777 12 189 2.52E-43 T 14-10-2018 GYO_0563 88f96a57e89bba7ee7edd45a2c937ad2 3583 SUPERFAMILY SSF47336 2005 2075 1.11E-17 T 14-10-2018 IPR036736 ACP-like superfamily GYO_0563 88f96a57e89bba7ee7edd45a2c937ad2 3583 SUPERFAMILY SSF52777 3307 3550 1.56E-34 T 14-10-2018 GYO_0563 88f96a57e89bba7ee7edd45a2c937ad2 3583 SUPERFAMILY SSF56801 2505 3053 1.96E-150 T 14-10-2018 GYO_0563 88f96a57e89bba7ee7edd45a2c937ad2 3583 Pfam PF00550 Phosphopantetheine attachment site 3042 3104 7.1E-16 T 14-10-2018 IPR009081 Phosphopantetheine binding ACP domain GYO_0563 88f96a57e89bba7ee7edd45a2c937ad2 3583 Pfam PF00550 Phosphopantetheine attachment site 2013 2075 6.7E-14 T 14-10-2018 IPR009081 Phosphopantetheine binding ACP domain GYO_0563 88f96a57e89bba7ee7edd45a2c937ad2 3583 Pfam PF00550 Phosphopantetheine attachment site 973 1035 3.8E-12 T 14-10-2018 IPR009081 Phosphopantetheine binding ACP domain GYO_0563 88f96a57e89bba7ee7edd45a2c937ad2 3583 Gene3D G3DSA:3.30.559.10 12 382 1.5E-130 T 14-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 GYO_0563 88f96a57e89bba7ee7edd45a2c937ad2 3583 Gene3D G3DSA:3.30.300.30 1899 1999 2.0E-30 T 14-10-2018 GYO_0563 88f96a57e89bba7ee7edd45a2c937ad2 3583 Gene3D G3DSA:3.30.300.30 859 960 2.1E-30 T 14-10-2018 GYO_0563 88f96a57e89bba7ee7edd45a2c937ad2 3583 TIGRFAM TIGR01720 NRPS-para261: non-ribosomal peptide synthase domain TIGR01720 3425 3573 6.1E-51 T 14-10-2018 IPR010060 Non-ribosomal peptide synthase GYO_0563 88f96a57e89bba7ee7edd45a2c937ad2 3583 ProSitePatterns PS00012 Phosphopantetheine attachment site. 2035 2050 - T 14-10-2018 IPR006162 Phosphopantetheine attachment site GYO_0563 88f96a57e89bba7ee7edd45a2c937ad2 3583 Gene3D G3DSA:3.40.50.12780 1495 1896 2.7E-131 T 14-10-2018 GYO_0563 88f96a57e89bba7ee7edd45a2c937ad2 3583 SUPERFAMILY SSF52777 2091 2282 1.41E-45 T 14-10-2018 GYO_0563 88f96a57e89bba7ee7edd45a2c937ad2 3583 ProSitePatterns PS00455 Putative AMP-binding domain signature. 1642 1653 - T 14-10-2018 IPR020845 AMP-binding, conserved site GYO_0563 88f96a57e89bba7ee7edd45a2c937ad2 3583 ProSitePatterns PS00455 Putative AMP-binding domain signature. 2692 2703 - T 14-10-2018 IPR020845 AMP-binding, conserved site GYO_0563 88f96a57e89bba7ee7edd45a2c937ad2 3583 SUPERFAMILY SSF56801 1464 2024 2.49E-150 T 14-10-2018 GYO_0563 88f96a57e89bba7ee7edd45a2c937ad2 3583 SUPERFAMILY SSF52777 2268 2510 1.89E-60 T 14-10-2018 GYO_0563 88f96a57e89bba7ee7edd45a2c937ad2 3583 SUPERFAMILY SSF52777 1226 1472 1.06E-60 T 14-10-2018 GYO_0563 88f96a57e89bba7ee7edd45a2c937ad2 3583 Pfam PF00668 Condensation domain 3118 3566 6.5E-128 T 14-10-2018 IPR001242 Condensation domain GYO_0563 88f96a57e89bba7ee7edd45a2c937ad2 3583 Pfam PF00668 Condensation domain 1055 1485 2.0E-147 T 14-10-2018 IPR001242 Condensation domain GYO_0563 88f96a57e89bba7ee7edd45a2c937ad2 3583 Pfam PF00668 Condensation domain 7 450 7.6E-142 T 14-10-2018 IPR001242 Condensation domain GYO_0563 88f96a57e89bba7ee7edd45a2c937ad2 3583 Pfam PF00668 Condensation domain 2093 2527 8.3E-150 T 14-10-2018 IPR001242 Condensation domain GYO_0563 88f96a57e89bba7ee7edd45a2c937ad2 3583 SMART SM00823 Phosphopantetheine attachment site 971 1039 0.024 T 14-10-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 GYO_0563 88f96a57e89bba7ee7edd45a2c937ad2 3583 SMART SM00823 Phosphopantetheine attachment site 3040 3108 2.4E-4 T 14-10-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 GYO_0563 88f96a57e89bba7ee7edd45a2c937ad2 3583 SMART SM00823 Phosphopantetheine attachment site 2011 2080 0.0029 T 14-10-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 GYO_0563 88f96a57e89bba7ee7edd45a2c937ad2 3583 Gene3D G3DSA:3.30.559.10 3109 3288 1.6E-61 T 14-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 GYO_0563 88f96a57e89bba7ee7edd45a2c937ad2 3583 Pfam PF13193 AMP-binding enzyme C-terminal domain 872 945 5.9E-6 T 14-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain GYO_0563 88f96a57e89bba7ee7edd45a2c937ad2 3583 Pfam PF13193 AMP-binding enzyme C-terminal domain 2942 3014 1.3E-10 T 14-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain GYO_0563 88f96a57e89bba7ee7edd45a2c937ad2 3583 Pfam PF13193 AMP-binding enzyme C-terminal domain 1912 1984 1.4E-8 T 14-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain GYO_0563 88f96a57e89bba7ee7edd45a2c937ad2 3583 Gene3D G3DSA:3.30.559.30 3289 3556 9.4E-68 T 14-10-2018 GYO_0563 88f96a57e89bba7ee7edd45a2c937ad2 3583 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 1523 1928 1.1E-133 T 14-10-2018 IPR010071 Amino acid adenylation domain GYO_0563 88f96a57e89bba7ee7edd45a2c937ad2 3583 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 2568 2958 5.1E-120 T 14-10-2018 IPR010071 Amino acid adenylation domain GYO_0563 88f96a57e89bba7ee7edd45a2c937ad2 3583 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 492 888 5.1E-131 T 14-10-2018 IPR010071 Amino acid adenylation domain GYO_0563 88f96a57e89bba7ee7edd45a2c937ad2 3583 Gene3D G3DSA:1.10.1200.10 961 1044 1.3E-21 T 14-10-2018 IPR036736 ACP-like superfamily GYO_0563 88f96a57e89bba7ee7edd45a2c937ad2 3583 Gene3D G3DSA:1.10.1200.10 2000 2080 2.6E-25 T 14-10-2018 IPR036736 ACP-like superfamily GYO_0563 88f96a57e89bba7ee7edd45a2c937ad2 3583 Gene3D G3DSA:1.10.1200.10 3030 3108 1.4E-25 T 14-10-2018 IPR036736 ACP-like superfamily GYO_0563 88f96a57e89bba7ee7edd45a2c937ad2 3583 SUPERFAMILY SSF52777 1052 1240 1.56E-44 T 14-10-2018 GYO_0563 88f96a57e89bba7ee7edd45a2c937ad2 3583 SUPERFAMILY SSF47336 963 1036 2.02E-14 T 14-10-2018 IPR036736 ACP-like superfamily GYO_0563 88f96a57e89bba7ee7edd45a2c937ad2 3583 ProSitePatterns PS00012 Phosphopantetheine attachment site. 3064 3079 - T 14-10-2018 IPR006162 Phosphopantetheine attachment site GYO_0563 88f96a57e89bba7ee7edd45a2c937ad2 3583 SMART SM01294 3041 3104 0.0076 T 14-10-2018 GYO_0563 88f96a57e89bba7ee7edd45a2c937ad2 3583 ProSitePatterns PS00012 Phosphopantetheine attachment site. 994 1009 - T 14-10-2018 IPR006162 Phosphopantetheine attachment site GYO_0563 88f96a57e89bba7ee7edd45a2c937ad2 3583 Gene3D G3DSA:3.30.559.10 2098 2456 1.8E-148 T 14-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 GYO_0563 88f96a57e89bba7ee7edd45a2c937ad2 3583 Gene3D G3DSA:3.30.300.30 2929 3029 2.8E-32 T 14-10-2018 GYO_0563 88f96a57e89bba7ee7edd45a2c937ad2 3583 Gene3D G3DSA:3.30.559.30 1227 1470 1.1E-146 T 14-10-2018 GYO_0563 88f96a57e89bba7ee7edd45a2c937ad2 3583 Gene3D G3DSA:3.30.559.10 1059 1414 1.1E-146 T 14-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 GYO_0563 88f96a57e89bba7ee7edd45a2c937ad2 3583 Pfam PF00501 AMP-binding enzyme 471 864 4.1E-99 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 GYO_0563 88f96a57e89bba7ee7edd45a2c937ad2 3583 Pfam PF00501 AMP-binding enzyme 1502 1904 1.9E-103 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 GYO_0563 88f96a57e89bba7ee7edd45a2c937ad2 3583 Pfam PF00501 AMP-binding enzyme 2547 2934 3.5E-96 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 GYO_0563 88f96a57e89bba7ee7edd45a2c937ad2 3583 Gene3D G3DSA:3.40.50.12780 457 858 1.1E-134 T 14-10-2018 GYO_0563 88f96a57e89bba7ee7edd45a2c937ad2 3583 Gene3D G3DSA:3.40.50.12780 2533 2928 5.2E-125 T 14-10-2018 GYO_0563 88f96a57e89bba7ee7edd45a2c937ad2 3583 SUPERFAMILY SSF52777 190 434 3.22E-49 T 14-10-2018 GYO_0563 88f96a57e89bba7ee7edd45a2c937ad2 3583 SUPERFAMILY SSF52777 3114 3293 6.08E-38 T 14-10-2018 GYO_0563 88f96a57e89bba7ee7edd45a2c937ad2 3583 ProSitePatterns PS00455 Putative AMP-binding domain signature. 611 622 - T 14-10-2018 IPR020845 AMP-binding, conserved site GYO_0563 88f96a57e89bba7ee7edd45a2c937ad2 3583 Gene3D G3DSA:3.30.559.30 2266 2512 1.8E-148 T 14-10-2018 GYO_0563 88f96a57e89bba7ee7edd45a2c937ad2 3583 SUPERFAMILY SSF56801 429 984 1.31E-151 T 14-10-2018 GYO_0563 88f96a57e89bba7ee7edd45a2c937ad2 3583 SUPERFAMILY SSF47336 3032 3105 1.96E-20 T 14-10-2018 IPR036736 ACP-like superfamily GYO_0563 88f96a57e89bba7ee7edd45a2c937ad2 3583 Gene3D G3DSA:3.30.559.30 191 447 1.5E-130 T 14-10-2018 GYO_1923 f72dd11dfbfdeac34c7250861cd5849c 317 Pfam PF00551 Formyl transferase 3 180 1.5E-39 T 14-10-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 GYO_1923 f72dd11dfbfdeac34c7250861cd5849c 317 ProSitePatterns PS00373 Phosphoribosylglycinamide formyltransferase active site. 133 156 - T 14-10-2018 IPR001555 Phosphoribosylglycinamide formyltransferase, active site KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 GYO_1923 f72dd11dfbfdeac34c7250861cd5849c 317 Gene3D G3DSA:3.40.50.170 1 206 8.4E-87 T 14-10-2018 GYO_1923 f72dd11dfbfdeac34c7250861cd5849c 317 SUPERFAMILY SSF50486 205 310 1.35E-34 T 14-10-2018 IPR011034 Formyl transferase-like, C-terminal domain superfamily GO:0003824 GYO_1923 f72dd11dfbfdeac34c7250861cd5849c 317 TIGRFAM TIGR00460 fmt: methionyl-tRNA formyltransferase 2 310 1.6E-126 T 14-10-2018 IPR005794 Methionyl-tRNA formyltransferase GO:0004479|GO:0071951 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9|Reactome: R-HSA-5368286 GYO_1923 f72dd11dfbfdeac34c7250861cd5849c 317 Hamap MF_00182 Methionyl-tRNA formyltransferase [fmt]. 2 305 37.335 T 14-10-2018 IPR005794 Methionyl-tRNA formyltransferase GO:0004479|GO:0071951 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9|Reactome: R-HSA-5368286 GYO_1923 f72dd11dfbfdeac34c7250861cd5849c 317 Gene3D G3DSA:3.10.25.10 207 314 4.2E-40 T 14-10-2018 IPR037022 Formyl transferase, C-terminal domain superfamily GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 GYO_1923 f72dd11dfbfdeac34c7250861cd5849c 317 SUPERFAMILY SSF53328 3 206 7.46E-67 T 14-10-2018 IPR036477 Formyl transferase, N-terminal domain superfamily GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 GYO_1923 f72dd11dfbfdeac34c7250861cd5849c 317 Pfam PF02911 Formyl transferase, C-terminal domain 204 302 9.3E-33 T 14-10-2018 IPR005793 Formyl transferase, C-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 GYO_2140 164e45f41d08086f8ac244d1bafb134b 363 PIRSF PIRSF006060 305 356 96.0 T 14-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 GYO_2140 164e45f41d08086f8ac244d1bafb134b 363 PIRSF PIRSF006060 6 313 2.1E-11 T 14-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 GYO_2140 164e45f41d08086f8ac244d1bafb134b 363 Pfam PF03845 Spore germination protein 7 329 7.0E-116 T 14-10-2018 IPR004761 Spore germination GerAB GO:0009847|GO:0016021 GYO_2140 164e45f41d08086f8ac244d1bafb134b 363 Gene3D G3DSA:1.20.1740.10 3 301 9.7E-15 T 14-10-2018 GYO_2140 164e45f41d08086f8ac244d1bafb134b 363 TIGRFAM TIGR00912 2A0309: spore germination protein (amino acid permease) 7 362 4.3E-83 T 14-10-2018 IPR004761 Spore germination GerAB GO:0009847|GO:0016021 GYO_3383 164a0892a76633ba53f58982c8d1fd81 402 Pfam PF00465 Iron-containing alcohol dehydrogenase 19 385 4.2E-118 T 14-10-2018 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA GO:0016491|GO:0046872|GO:0055114 Reactome: R-HSA-880009 GYO_3383 164a0892a76633ba53f58982c8d1fd81 402 ProSitePatterns PS00913 Iron-containing alcohol dehydrogenases signature 1. 186 214 - T 14-10-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 GYO_3383 164a0892a76633ba53f58982c8d1fd81 402 Gene3D G3DSA:3.40.50.1970 3 197 1.2E-59 T 14-10-2018 GYO_3383 164a0892a76633ba53f58982c8d1fd81 402 ProSitePatterns PS00060 Iron-containing alcohol dehydrogenases signature 2. 273 293 - T 14-10-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 GYO_3383 164a0892a76633ba53f58982c8d1fd81 402 Gene3D G3DSA:1.20.1090.10 199 397 2.0E-60 T 14-10-2018 GYO_3383 164a0892a76633ba53f58982c8d1fd81 402 SUPERFAMILY SSF56796 12 395 3.79E-121 T 14-10-2018 GYO_3964 34842734ba38d06bb177b3803a6951da 205 Pfam PF01613 Flavin reductase like domain 23 168 1.2E-18 T 14-10-2018 IPR002563 Flavin reductase like domain GO:0010181 GYO_3964 34842734ba38d06bb177b3803a6951da 205 SMART SM00903 20 177 1.2E-30 T 14-10-2018 IPR002563 Flavin reductase like domain GO:0010181 GYO_3964 34842734ba38d06bb177b3803a6951da 205 SUPERFAMILY SSF50475 2 200 6.87E-42 T 14-10-2018 GYO_3964 34842734ba38d06bb177b3803a6951da 205 Gene3D G3DSA:2.30.110.10 1 205 3.8E-63 T 14-10-2018 IPR012349 FMN-binding split barrel GO:0048037 GYO_0459 4aea211d9ed45fc4a65da66f8f19cb08 411 Pfam PF00079 Serpin (serine protease inhibitor) 55 409 1.5E-86 T 14-10-2018 IPR023796 Serpin domain GYO_0459 4aea211d9ed45fc4a65da66f8f19cb08 411 ProSitePatterns PS00284 Serpins signature. 382 392 - T 14-10-2018 IPR023795 Serpin, conserved site GYO_0459 4aea211d9ed45fc4a65da66f8f19cb08 411 Gene3D G3DSA:2.30.39.10 212 409 1.9E-93 T 14-10-2018 GYO_0459 4aea211d9ed45fc4a65da66f8f19cb08 411 Gene3D G3DSA:3.30.497.10 56 358 1.9E-93 T 14-10-2018 GYO_0459 4aea211d9ed45fc4a65da66f8f19cb08 411 SMART SM00093 58 409 1.5E-65 T 14-10-2018 IPR023796 Serpin domain GYO_0459 4aea211d9ed45fc4a65da66f8f19cb08 411 SUPERFAMILY SSF56574 3 409 9.69E-87 T 14-10-2018 IPR036186 Serpin superfamily GYO_3099 c764b664150b5cfd712d8e542719ce40 325 Pfam PF01012 Electron transfer flavoprotein domain 7 179 3.4E-46 T 14-10-2018 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 GYO_3099 c764b664150b5cfd712d8e542719ce40 325 SMART SM00893 5 187 2.2E-48 T 14-10-2018 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 GYO_3099 c764b664150b5cfd712d8e542719ce40 325 SUPERFAMILY SSF52467 198 317 4.82E-49 T 14-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily GYO_3099 c764b664150b5cfd712d8e542719ce40 325 SUPERFAMILY SSF52402 3 192 6.28E-51 T 14-10-2018 GYO_3099 c764b664150b5cfd712d8e542719ce40 325 PIRSF PIRSF000089 1 322 7.2E-116 T 14-10-2018 IPR001308 Electron transfer flavoprotein alpha subunit/FixB GO:0009055|GO:0050660 Reactome: R-HSA-611105 GYO_3099 c764b664150b5cfd712d8e542719ce40 325 Gene3D G3DSA:3.40.50.620 2 193 2.2E-59 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold GYO_3099 c764b664150b5cfd712d8e542719ce40 325 Pfam PF00766 Electron transfer flavoprotein FAD-binding domain 198 281 9.3E-36 T 14-10-2018 IPR014731 Electron transfer flavoprotein, alpha subunit, C-terminal Reactome: R-HSA-611105 GYO_3099 c764b664150b5cfd712d8e542719ce40 325 Gene3D G3DSA:3.40.50.1220 194 324 4.5E-57 T 14-10-2018 GYO_3099 c764b664150b5cfd712d8e542719ce40 325 ProSitePatterns PS00696 Electron transfer flavoprotein alpha-subunit signature. 262 288 - T 14-10-2018 IPR018206 Electron transfer flavoprotein subunit alpha, conserved site Reactome: R-HSA-611105 GYO_3545 6005c1e5d237eeb9c72e63520467f721 173 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 19 73 1.5E-6 T 14-10-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 GYO_3545 6005c1e5d237eeb9c72e63520467f721 173 Pfam PF01799 [2Fe-2S] binding domain 86 156 8.8E-27 T 14-10-2018 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 GYO_3545 6005c1e5d237eeb9c72e63520467f721 173 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 52 60 - T 14-10-2018 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 GYO_3545 6005c1e5d237eeb9c72e63520467f721 173 Gene3D G3DSA:1.10.150.120 91 166 5.6E-27 T 14-10-2018 GYO_3545 6005c1e5d237eeb9c72e63520467f721 173 TIGRFAM TIGR03198 pucE: xanthine dehydrogenase E subunit 13 163 8.8E-84 T 14-10-2018 IPR017611 Xanthine dehydrogenase E subunit KEGG: 00230+1.17.1.4|MetaCyc: PWY-5497|MetaCyc: PWY-5695|MetaCyc: PWY-6538|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-6999 GYO_3545 6005c1e5d237eeb9c72e63520467f721 173 SUPERFAMILY SSF54292 15 91 3.54E-22 T 14-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 GYO_3545 6005c1e5d237eeb9c72e63520467f721 173 SUPERFAMILY SSF47741 86 167 1.26E-28 T 14-10-2018 IPR036884 [2Fe-2S]-binding domain superfamily GYO_3545 6005c1e5d237eeb9c72e63520467f721 173 Gene3D G3DSA:3.10.20.30 10 90 2.5E-27 T 14-10-2018 IPR012675 Beta-grasp domain superfamily GYO_0867 dd9456d1fa4c47578956af67698782d4 544 TIGRFAM TIGR02348 GroEL: chaperonin GroL 2 524 2.2E-260 T 14-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 GYO_0867 dd9456d1fa4c47578956af67698782d4 544 SUPERFAMILY SSF54849 136 204 3.89E-27 T 14-10-2018 IPR027410 TCP-1-like chaperonin intermediate domain superfamily GYO_0867 dd9456d1fa4c47578956af67698782d4 544 Pfam PF00118 TCP-1/cpn60 chaperonin family 22 522 4.2E-105 T 14-10-2018 IPR002423 Chaperonin Cpn60/TCP-1 family GO:0005524 GYO_0867 dd9456d1fa4c47578956af67698782d4 544 SUPERFAMILY SSF48592 5 518 7.63E-81 T 14-10-2018 IPR027413 GroEL-like equatorial domain superfamily GYO_0867 dd9456d1fa4c47578956af67698782d4 544 PRINTS PR00298 60kDa chaperonin signature 82 109 3.0E-73 T 14-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 GYO_0867 dd9456d1fa4c47578956af67698782d4 544 PRINTS PR00298 60kDa chaperonin signature 26 52 3.0E-73 T 14-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 GYO_0867 dd9456d1fa4c47578956af67698782d4 544 PRINTS PR00298 60kDa chaperonin signature 266 289 3.0E-73 T 14-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 GYO_0867 dd9456d1fa4c47578956af67698782d4 544 PRINTS PR00298 60kDa chaperonin signature 348 373 3.0E-73 T 14-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 GYO_0867 dd9456d1fa4c47578956af67698782d4 544 PRINTS PR00298 60kDa chaperonin signature 396 417 3.0E-73 T 14-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 GYO_0867 dd9456d1fa4c47578956af67698782d4 544 Gene3D G3DSA:3.30.260.10 135 408 1.2E-236 T 14-10-2018 IPR027410 TCP-1-like chaperonin intermediate domain superfamily GYO_0867 dd9456d1fa4c47578956af67698782d4 544 ProSitePatterns PS00296 Chaperonins cpn60 signature. 403 414 - T 14-10-2018 IPR018370 Chaperonin Cpn60, conserved site GO:0005524|GO:0005737|GO:0006457 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 GYO_0867 dd9456d1fa4c47578956af67698782d4 544 Gene3D G3DSA:3.50.7.10 190 370 1.2E-236 T 14-10-2018 IPR027409 GroEL-like apical domain superfamily GYO_0867 dd9456d1fa4c47578956af67698782d4 544 SUPERFAMILY SSF52029 183 374 1.48E-84 T 14-10-2018 IPR027409 GroEL-like apical domain superfamily GYO_0867 dd9456d1fa4c47578956af67698782d4 544 Gene3D G3DSA:1.10.560.10 7 518 1.2E-236 T 14-10-2018 IPR027413 GroEL-like equatorial domain superfamily GYO_0867 dd9456d1fa4c47578956af67698782d4 544 Hamap MF_00600 60 kDa chaperonin [groL]. 1 543 42.706 T 14-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 GYO_3011 cb1de5018e8d6d9d1c4d07e0e14add77 381 TIGRFAM TIGR00449 tgt_general: tRNA-guanine family transglycosylase 8 375 1.2E-181 T 14-10-2018 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0016763 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 GYO_3011 cb1de5018e8d6d9d1c4d07e0e14add77 381 Gene3D G3DSA:3.20.20.105 2 375 2.8E-174 T 14-10-2018 IPR036511 Queuine tRNA-ribosyltransferase-like GO:0006400|GO:0016763 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 GYO_3011 cb1de5018e8d6d9d1c4d07e0e14add77 381 Pfam PF01702 Queuine tRNA-ribosyltransferase 134 367 2.1E-95 T 14-10-2018 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0016763 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 GYO_3011 cb1de5018e8d6d9d1c4d07e0e14add77 381 Hamap MF_00168 Queuine tRNA-ribosyltransferase [tgt]. 6 370 58.027 T 14-10-2018 IPR004803 tRNA-guanine transglycosylase GO:0008479|GO:0101030 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 GYO_3011 cb1de5018e8d6d9d1c4d07e0e14add77 381 SUPERFAMILY SSF51713 7 371 1.96E-164 T 14-10-2018 IPR036511 Queuine tRNA-ribosyltransferase-like GO:0006400|GO:0016763 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 GYO_3011 cb1de5018e8d6d9d1c4d07e0e14add77 381 TIGRFAM TIGR00430 Q_tRNA_tgt: tRNA-guanine transglycosylase 8 375 9.3E-193 T 14-10-2018 IPR004803 tRNA-guanine transglycosylase GO:0008479|GO:0101030 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 GYO_3005 c79c3ac31cc344b785ade97344c8ced6 737 PRINTS PR01755 Bacterial translocase SecF protein signature 584 598 3.2E-25 T 14-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial GYO_3005 c79c3ac31cc344b785ade97344c8ced6 737 PRINTS PR01755 Bacterial translocase SecF protein signature 474 489 3.2E-25 T 14-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial GYO_3005 c79c3ac31cc344b785ade97344c8ced6 737 PRINTS PR01755 Bacterial translocase SecF protein signature 632 650 3.2E-25 T 14-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial GYO_3005 c79c3ac31cc344b785ade97344c8ced6 737 PRINTS PR01755 Bacterial translocase SecF protein signature 667 682 3.2E-25 T 14-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial GYO_3005 c79c3ac31cc344b785ade97344c8ced6 737 Gene3D G3DSA:1.20.1640.10 425 473 2.3E-15 T 14-10-2018 GYO_3005 c79c3ac31cc344b785ade97344c8ced6 737 TIGRFAM TIGR00966 3a0501s07: protein-export membrane protein SecF 476 719 2.2E-68 T 14-10-2018 IPR005665 Protein-export membrane protein SecF, bacterial GO:0006886|GO:0015450 GYO_3005 c79c3ac31cc344b785ade97344c8ced6 737 Hamap MF_01464_B Protein-export membrane protein SecF [secF]. 447 730 25.286 T 14-10-2018 IPR005665 Protein-export membrane protein SecF, bacterial GO:0006886|GO:0015450 GYO_3005 c79c3ac31cc344b785ade97344c8ced6 737 Gene3D G3DSA:3.30.70.3400 33 121 3.7E-21 T 14-10-2018 GYO_3005 c79c3ac31cc344b785ade97344c8ced6 737 Gene3D G3DSA:1.20.1640.10 536 734 3.1E-7 T 14-10-2018 GYO_3005 c79c3ac31cc344b785ade97344c8ced6 737 Hamap MF_01463_B Protein translocase subunit SecD [secD]. 1 420 33.896 T 14-10-2018 IPR005791 Protein translocase subunit SecD GO:0006886|GO:0015450 GYO_3005 c79c3ac31cc344b785ade97344c8ced6 737 TIGRFAM TIGR00916 2A0604s01: protein-export membrane protein, SecD/SecF family 554 716 7.4E-50 T 14-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial GYO_3005 c79c3ac31cc344b785ade97344c8ced6 737 TIGRFAM TIGR00916 2A0604s01: protein-export membrane protein, SecD/SecF family 155 398 4.2E-59 T 14-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial GYO_3005 c79c3ac31cc344b785ade97344c8ced6 737 SUPERFAMILY SSF82866 540 732 5.36E-35 T 14-10-2018 GYO_3005 c79c3ac31cc344b785ade97344c8ced6 737 Pfam PF07549 SecD/SecF GG Motif 469 493 2.2E-6 T 14-10-2018 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site GYO_3005 c79c3ac31cc344b785ade97344c8ced6 737 SUPERFAMILY SSF82866 215 413 1.19E-42 T 14-10-2018 GYO_3005 c79c3ac31cc344b785ade97344c8ced6 737 Gene3D G3DSA:1.20.1640.10 249 421 2.3E-15 T 14-10-2018 GYO_3005 c79c3ac31cc344b785ade97344c8ced6 737 Pfam PF02355 Protein export membrane protein 550 727 2.6E-67 T 14-10-2018 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial GYO_3005 c79c3ac31cc344b785ade97344c8ced6 737 Pfam PF02355 Protein export membrane protein 241 409 2.9E-16 T 14-10-2018 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial GYO_3005 c79c3ac31cc344b785ade97344c8ced6 737 TIGRFAM TIGR01129 secD: protein-export membrane protein SecD 33 405 6.7E-120 T 14-10-2018 IPR005791 Protein translocase subunit SecD GO:0006886|GO:0015450 GYO_4516 2544f5a230a36e9d7e7be16b13f5e222 628 TIGRFAM TIGR00136 gidA: tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA 8 620 3.8E-303 T 14-10-2018 IPR004416 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG GO:0002098 Reactome: R-HSA-6787450 GYO_4516 2544f5a230a36e9d7e7be16b13f5e222 628 Pfam PF01134 Glucose inhibited division protein A 9 399 9.9E-171 T 14-10-2018 IPR002218 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG-related GO:0008033|GO:0050660 Reactome: R-HSA-6787450 GYO_4516 2544f5a230a36e9d7e7be16b13f5e222 628 Hamap MF_00129 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG [mnmG]. 6 623 42.526 T 14-10-2018 IPR004416 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG GO:0002098 Reactome: R-HSA-6787450 GYO_4516 2544f5a230a36e9d7e7be16b13f5e222 628 Gene3D G3DSA:1.10.10.1800 459 549 2.1E-26 T 14-10-2018 GYO_4516 2544f5a230a36e9d7e7be16b13f5e222 628 SMART SM01228 545 616 9.2E-42 T 14-10-2018 GYO_4516 2544f5a230a36e9d7e7be16b13f5e222 628 Gene3D G3DSA:3.50.50.60 2 222 2.8E-83 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily GYO_4516 2544f5a230a36e9d7e7be16b13f5e222 628 Gene3D G3DSA:3.50.50.60 296 458 1.4E-56 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily GYO_4516 2544f5a230a36e9d7e7be16b13f5e222 628 ProSitePatterns PS01281 Glucose inhibited division protein A family signature 2. 368 391 - T 14-10-2018 IPR020595 MnmG-related, conserved site Reactome: R-HSA-6787450 GYO_4516 2544f5a230a36e9d7e7be16b13f5e222 628 ProSitePatterns PS01280 Glucose inhibited division protein A family signature 1. 273 287 - T 14-10-2018 IPR020595 MnmG-related, conserved site Reactome: R-HSA-6787450 GYO_4516 2544f5a230a36e9d7e7be16b13f5e222 628 SUPERFAMILY SSF51905 7 261 6.92E-47 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily GYO_4516 2544f5a230a36e9d7e7be16b13f5e222 628 Gene3D G3DSA:1.10.150.570 568 620 1.3E-23 T 14-10-2018 GYO_4516 2544f5a230a36e9d7e7be16b13f5e222 628 Pfam PF13932 GidA associated domain 401 615 1.1E-79 T 14-10-2018 IPR026904 GidA associated domain 3 Reactome: R-HSA-6787450 GYO_3952 b0cea405d99db52b0194bac0f7899987 131 Gene3D G3DSA:3.40.1650.10 8 127 5.3E-37 T 14-10-2018 IPR023750 RbsD-like superfamily GO:0005996|GO:0016853|GO:0048029 Reactome: R-HSA-6787639 GYO_3952 b0cea405d99db52b0194bac0f7899987 131 SUPERFAMILY SSF102546 1 131 1.7E-43 T 14-10-2018 IPR023750 RbsD-like superfamily GO:0005996|GO:0016853|GO:0048029 Reactome: R-HSA-6787639 GYO_3952 b0cea405d99db52b0194bac0f7899987 131 Hamap MF_01661 D-ribose pyranase [rbsD]. 1 131 31.542 T 14-10-2018 IPR023064 D-ribose pyranase GO:0016872 GYO_3952 b0cea405d99db52b0194bac0f7899987 131 Pfam PF05025 RbsD / FucU transport protein family 1 129 4.0E-46 T 14-10-2018 IPR007721 D-ribose pyranase RbsD/L-fucose mutarotase FucU GO:0005996|GO:0016853|GO:0048029 Reactome: R-HSA-6787639 GYO_3536 fcccbfd2a6e1aa0a1a1063e71ad9eee5 450 TIGRFAM TIGR00801 ncs2: uracil-xanthine permease 6 420 7.5E-144 T 14-10-2018 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 Reactome: R-HSA-196836 GYO_3536 fcccbfd2a6e1aa0a1a1063e71ad9eee5 450 Pfam PF00860 Permease family 9 390 6.5E-125 T 14-10-2018 IPR006043 Xanthine/uracil/vitamin C permease GO:0016020|GO:0022857|GO:0055085 GYO_3536 fcccbfd2a6e1aa0a1a1063e71ad9eee5 450 TIGRFAM TIGR03173 pbuX: xanthine permease 12 422 9.7E-158 T 14-10-2018 IPR017588 Uric acid permease UacT-like GO:0016021|GO:0022857|GO:0055085 GYO_3536 fcccbfd2a6e1aa0a1a1063e71ad9eee5 450 ProSitePatterns PS01116 Xanthine/uracil permeases family signature. 338 358 - T 14-10-2018 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 Reactome: R-HSA-196836 GYO_2626 522d2f2f51b1b86fa3a47bd398be9cbe 253 SUPERFAMILY SSF53474 5 234 1.19E-23 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold GYO_2626 522d2f2f51b1b86fa3a47bd398be9cbe 253 Gene3D G3DSA:3.40.50.1820 8 238 3.3E-29 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold GYO_2626 522d2f2f51b1b86fa3a47bd398be9cbe 253 Pfam PF12146 Serine aminopeptidase, S33 29 135 6.2E-9 T 14-10-2018 IPR022742 Serine aminopeptidase, S33 GYO_2952 0e90ee2d6744a5dd8882f418452cab17 98 Pfam PF14145 YrhK-like protein 22 77 1.6E-20 T 14-10-2018 IPR025424 YrhK domain GYO_2952 0e90ee2d6744a5dd8882f418452cab17 98 ProDom PD968187 BETA-DEFENSIN ANTIBIOTIC PRECURSOR ANTIMICROBIAL DEFENSIN BETA SIGNAL DEFENSIN BD-32 DEFB-32 10 90 4.0E-32 T 14-10-2018 GYO_0354 712a0c64688facd949699f2f13279613 317 Pfam PF01497 Periplasmic binding protein 100 288 1.3E-31 T 14-10-2018 IPR002491 ABC transporter periplasmic binding domain GYO_0354 712a0c64688facd949699f2f13279613 317 SUPERFAMILY SSF53807 45 309 9.81E-59 T 14-10-2018 GYO_0354 712a0c64688facd949699f2f13279613 317 Gene3D G3DSA:3.40.50.1980 36 161 2.1E-27 T 14-10-2018 GYO_0354 712a0c64688facd949699f2f13279613 317 Gene3D G3DSA:3.40.50.1980 162 317 7.2E-49 T 14-10-2018 GYO_3111 70d8edac379693ec1a2ef94a9eb2d74b 344 Pfam PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain 21 88 7.1E-24 T 14-10-2018 IPR004188 Phenylalanine-tRNA ligase, class II, N-terminal GO:0000166|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 GYO_3111 70d8edac379693ec1a2ef94a9eb2d74b 344 Gene3D G3DSA:3.30.930.10 8 344 1.0E-125 T 14-10-2018 GYO_3111 70d8edac379693ec1a2ef94a9eb2d74b 344 Hamap MF_00281 Phenylalanine--tRNA ligase alpha subunit [pheS]. 9 341 48.788 T 14-10-2018 IPR022911 Phenylalanine-tRNA ligase alpha chain 1, bacterial GO:0004826 KEGG: 00970+6.1.1.20 GYO_3111 70d8edac379693ec1a2ef94a9eb2d74b 344 Pfam PF01409 tRNA synthetases class II core domain (F) 93 341 4.4E-108 T 14-10-2018 IPR002319 Phenylalanyl-tRNA synthetase GO:0000049|GO:0004812|GO:0005524|GO:0005737|GO:0043039 KEGG: 00970+6.1.1.20 GYO_3111 70d8edac379693ec1a2ef94a9eb2d74b 344 SUPERFAMILY SSF46589 14 99 1.2E-19 T 14-10-2018 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm GO:0000166 GYO_3111 70d8edac379693ec1a2ef94a9eb2d74b 344 SUPERFAMILY SSF55681 93 342 1.19E-83 T 14-10-2018 GYO_3111 70d8edac379693ec1a2ef94a9eb2d74b 344 TIGRFAM TIGR00468 pheS: phenylalanine--tRNA ligase, alpha subunit 40 342 8.4E-118 T 14-10-2018 IPR004529 Phenylalanyl-tRNA synthetase, class IIc, alpha subunit GO:0000166|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20|Reactome: R-HSA-379716 GYO_2100 3263cc57b954c7a49c2c70d2296aa932 255 SUPERFAMILY SSF110997 182 253 1.57E-15 T 14-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 GYO_2100 3263cc57b954c7a49c2c70d2296aa932 255 Gene3D G3DSA:3.40.630.40 1 174 1.4E-53 T 14-10-2018 GYO_2100 3263cc57b954c7a49c2c70d2296aa932 255 Gene3D G3DSA:3.30.70.1070 184 255 1.6E-29 T 14-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 GYO_2100 3263cc57b954c7a49c2c70d2296aa932 255 SMART SM00646 64 172 2.3E-44 T 14-10-2018 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 GYO_2100 3263cc57b954c7a49c2c70d2296aa932 255 SUPERFAMILY SSF53187 1 177 1.26E-51 T 14-10-2018 GYO_2100 3263cc57b954c7a49c2c70d2296aa932 255 Pfam PF05036 Sporulation related domain 183 252 7.9E-18 T 14-10-2018 IPR007730 Sporulation-like domain GO:0042834 GYO_2100 3263cc57b954c7a49c2c70d2296aa932 255 Pfam PF01520 N-acetylmuramoyl-L-alanine amidase 4 172 1.3E-44 T 14-10-2018 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 GYO_0601 a4ba21fe13f80fcada5206abf84b26a6 301 Gene3D G3DSA:1.10.10.60 12 59 5.3E-15 T 14-10-2018 GYO_0601 a4ba21fe13f80fcada5206abf84b26a6 301 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 38 61 6.8E-8 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 GYO_0601 a4ba21fe13f80fcada5206abf84b26a6 301 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 17 30 6.8E-8 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 GYO_0601 a4ba21fe13f80fcada5206abf84b26a6 301 Pfam PF00440 Bacterial regulatory proteins, tetR family 17 63 7.8E-16 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 GYO_0601 a4ba21fe13f80fcada5206abf84b26a6 301 SUPERFAMILY SSF46689 12 79 1.84E-14 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 GYO_0601 a4ba21fe13f80fcada5206abf84b26a6 301 Gene3D G3DSA:1.10.357.10 60 194 6.5E-5 T 14-10-2018 GYO_1797 b87efe5cef1acda2f56985c4baa00932 371 TIGRFAM TIGR03181 PDH_E1_alph_x: pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit 24 363 4.2E-143 T 14-10-2018 IPR017596 Pyruvate dehydrogenase E1 component subunit alpha/BCKADH E1-alpha KEGG: 00010+1.2.4.1|KEGG: 00020+1.2.4.1|KEGG: 00620+1.2.4.1 GYO_1797 b87efe5cef1acda2f56985c4baa00932 371 SUPERFAMILY SSF52518 11 365 1.47E-100 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold GYO_1797 b87efe5cef1acda2f56985c4baa00932 371 Gene3D G3DSA:3.40.50.970 5 371 6.8E-123 T 14-10-2018 GYO_1797 b87efe5cef1acda2f56985c4baa00932 371 Pfam PF00676 Dehydrogenase E1 component 53 343 8.1E-103 T 14-10-2018 IPR001017 Dehydrogenase, E1 component GO:0016624 Reactome: R-HSA-389661 GYO_0987 899948473c7d9fd0788792a8254ab193 647 Pfam PF00884 Sulfatase 252 544 1.1E-35 T 14-10-2018 IPR000917 Sulfatase, N-terminal GO:0008484 GYO_0987 899948473c7d9fd0788792a8254ab193 647 PIRSF PIRSF005091 2 627 1.3E-198 T 14-10-2018 IPR012160 Lipoteichoic acid synthase-like GYO_0987 899948473c7d9fd0788792a8254ab193 647 SUPERFAMILY SSF53649 250 642 1.29E-78 T 14-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 GYO_0987 899948473c7d9fd0788792a8254ab193 647 Gene3D G3DSA:3.40.720.10 244 554 6.7E-81 T 14-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 GYO_0484 8f45666439a0c70f740a699403648bec 373 SMART SM00028 99 132 25.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 GYO_0484 8f45666439a0c70f740a699403648bec 373 SMART SM00028 139 172 110.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 GYO_0484 8f45666439a0c70f740a699403648bec 373 SMART SM00028 259 292 21.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 GYO_0484 8f45666439a0c70f740a699403648bec 373 SMART SM00028 220 253 1.5E-4 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 GYO_0484 8f45666439a0c70f740a699403648bec 373 Gene3D G3DSA:1.25.40.10 1 372 5.5E-114 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 GYO_0484 8f45666439a0c70f740a699403648bec 373 SUPERFAMILY SSF48452 132 280 1.31E-14 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 GYO_0535 bd5adf1464143945eb82926e3f8fb0fd 481 ProSitePatterns PS00839 Uroporphyrin-III C-methyltransferase signature 1. 9 23 - T 14-10-2018 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 GYO_0535 bd5adf1464143945eb82926e3f8fb0fd 481 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 6 217 3.2E-47 T 14-10-2018 IPR000878 Tetrapyrrole methylase GO:0008168 Reactome: R-HSA-5358493 GYO_0535 bd5adf1464143945eb82926e3f8fb0fd 481 SUPERFAMILY SSF69618 258 447 1.13E-13 T 14-10-2018 IPR036108 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase superfamily GO:0004852|GO:0033014 KEGG: 00860+4.2.1.75|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 GYO_0535 bd5adf1464143945eb82926e3f8fb0fd 481 SUPERFAMILY SSF53790 2 250 9.68E-79 T 14-10-2018 IPR035996 Tetrapyrrole methylase superfamily GO:0008168 Reactome: R-HSA-5358493 GYO_0535 bd5adf1464143945eb82926e3f8fb0fd 481 TIGRFAM TIGR01469 cobA_cysG_Cterm: uroporphyrinogen-III C-methyltransferase 4 241 5.5E-95 T 14-10-2018 IPR006366 Uroporphyrin-III C-methyltransferase GO:0008168|GO:0019354 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 GYO_0535 bd5adf1464143945eb82926e3f8fb0fd 481 Gene3D G3DSA:3.40.50.10090 262 368 1.8E-7 T 14-10-2018 GYO_0535 bd5adf1464143945eb82926e3f8fb0fd 481 ProSitePatterns PS00840 Uroporphyrin-III C-methyltransferase signature 2. 84 117 - T 14-10-2018 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 GYO_0535 bd5adf1464143945eb82926e3f8fb0fd 481 Gene3D G3DSA:3.30.950.10 120 261 5.3E-49 T 14-10-2018 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008168 Reactome: R-HSA-5358493 GYO_0535 bd5adf1464143945eb82926e3f8fb0fd 481 PIRSF PIRSF036426 1 255 1.9E-99 T 14-10-2018 IPR012409 Sirohaem synthase GO:0004851|GO:0009236|GO:0019354|GO:0043115|GO:0051266|GO:0051287 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 GYO_0535 bd5adf1464143945eb82926e3f8fb0fd 481 Gene3D G3DSA:3.40.1010.10 2 119 1.7E-42 T 14-10-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008168 Reactome: R-HSA-5358493 GYO_4001 1d93d07f93b2e42b2a7e60e5020ed667 130 Gene3D G3DSA:1.10.1200.120 1 126 8.9E-43 T 14-10-2018 IPR036019 Gated mechanosensitive channel GYO_4001 1d93d07f93b2e42b2a7e60e5020ed667 130 TIGRFAM TIGR00220 mscL: large conductance mechanosensitive channel protein 1 125 1.3E-62 T 14-10-2018 IPR001185 Large-conductance mechanosensitive channel GO:0008381|GO:0016021|GO:0034220 GYO_4001 1d93d07f93b2e42b2a7e60e5020ed667 130 PRINTS PR01264 Bacterial mechano-sensitive ion channel signature 4 18 1.8E-12 T 14-10-2018 IPR001185 Large-conductance mechanosensitive channel GO:0008381|GO:0016021|GO:0034220 GYO_4001 1d93d07f93b2e42b2a7e60e5020ed667 130 PRINTS PR01264 Bacterial mechano-sensitive ion channel signature 84 93 1.8E-12 T 14-10-2018 IPR001185 Large-conductance mechanosensitive channel GO:0008381|GO:0016021|GO:0034220 GYO_4001 1d93d07f93b2e42b2a7e60e5020ed667 130 PRINTS PR01264 Bacterial mechano-sensitive ion channel signature 75 83 1.8E-12 T 14-10-2018 IPR001185 Large-conductance mechanosensitive channel GO:0008381|GO:0016021|GO:0034220 GYO_4001 1d93d07f93b2e42b2a7e60e5020ed667 130 ProSitePatterns PS01327 Large-conductance mechanosensitive channels mscL family signature. 11 24 - T 14-10-2018 IPR019823 Large-conductance mechanosensitive channel, conserved site GYO_4001 1d93d07f93b2e42b2a7e60e5020ed667 130 SUPERFAMILY SSF81330 10 119 5.89E-35 T 14-10-2018 IPR036019 Gated mechanosensitive channel GYO_4001 1d93d07f93b2e42b2a7e60e5020ed667 130 Pfam PF01741 Large-conductance mechanosensitive channel, MscL 1 123 2.0E-46 T 14-10-2018 IPR037673 Large-conductance mechanosensitive channel/anditomin synthesis protein L GYO_4001 1d93d07f93b2e42b2a7e60e5020ed667 130 Hamap MF_00115 Large-conductance mechanosensitive channel [mscL]. 1 124 24.456 T 14-10-2018 IPR001185 Large-conductance mechanosensitive channel GO:0008381|GO:0016021|GO:0034220 GYO_2638 fcee70c599fa4d11f6706be60b0e7753 140 Gene3D G3DSA:3.10.180.10 1 130 5.1E-39 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase GYO_2638 fcee70c599fa4d11f6706be60b0e7753 140 TIGRFAM TIGR03081 metmalonyl_epim: methylmalonyl-CoA epimerase 3 130 6.3E-43 T 14-10-2018 IPR017515 Methylmalonyl-CoA epimerase KEGG: 00280+5.1.99.1|KEGG: 00630+5.1.99.1|KEGG: 00640+5.1.99.1|KEGG: 00720+5.1.99.1|MetaCyc: PWY-5741|MetaCyc: PWY-5743|MetaCyc: PWY-5789|MetaCyc: PWY-6728|MetaCyc: PWY-7384|MetaCyc: PWY-7854|Reactome: R-HSA-71032 GYO_2638 fcee70c599fa4d11f6706be60b0e7753 140 SUPERFAMILY SSF54593 2 133 4.03E-29 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase GYO_2638 fcee70c599fa4d11f6706be60b0e7753 140 Pfam PF13669 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 5 115 1.3E-22 T 14-10-2018 GYO_3206 bfe14459241a6f1978602db331816dea 446 TIGRFAM TIGR00796 livcs: branched-chain amino acid transport system II carrier protein 14 420 2.8E-157 T 14-10-2018 IPR004685 Branched-chain amino acid transport system II carrier protein GO:0015658|GO:0015803|GO:0016021 GYO_3206 bfe14459241a6f1978602db331816dea 446 Pfam PF05525 Branched-chain amino acid transport protein 7 432 6.9E-163 T 14-10-2018 IPR004685 Branched-chain amino acid transport system II carrier protein GO:0015658|GO:0015803|GO:0016021 GYO_0932 5549b50bf0bf3ccbc16c9e75c04592f2 476 SUPERFAMILY SSF55931 4 294 3.14E-122 T 14-10-2018 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 GYO_0932 5549b50bf0bf3ccbc16c9e75c04592f2 476 TIGRFAM TIGR00133 gatB: aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit 2 473 4.1E-183 T 14-10-2018 IPR004413 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit GO:0016884 GYO_0932 5549b50bf0bf3ccbc16c9e75c04592f2 476 Gene3D G3DSA:1.10.10.410 413 476 1.1E-25 T 14-10-2018 IPR023168 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B, C-terminal GYO_0932 5549b50bf0bf3ccbc16c9e75c04592f2 476 Pfam PF02637 GatB domain 326 473 1.1E-55 T 14-10-2018 IPR018027 Asn/Gln amidotransferase GO:0016884 GYO_0932 5549b50bf0bf3ccbc16c9e75c04592f2 476 SMART SM00845 326 473 3.4E-78 T 14-10-2018 IPR018027 Asn/Gln amidotransferase GO:0016884 GYO_0932 5549b50bf0bf3ccbc16c9e75c04592f2 476 Gene3D G3DSA:1.10.150.380 298 411 6.3E-40 T 14-10-2018 GYO_0932 5549b50bf0bf3ccbc16c9e75c04592f2 476 Hamap MF_00121 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B [gatB]. 2 474 39.362 T 14-10-2018 IPR004413 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit GO:0016884 GYO_0932 5549b50bf0bf3ccbc16c9e75c04592f2 476 Pfam PF02934 GatB/GatE catalytic domain 5 286 1.8E-112 T 14-10-2018 IPR006075 Aspartyl/Glutamyl-tRNA(Gln) amidotransferase, subunit B/E, catalytic GO:0016874 GYO_0932 5549b50bf0bf3ccbc16c9e75c04592f2 476 SUPERFAMILY SSF89095 295 400 5.41E-37 T 14-10-2018 IPR003789 Aspartyl/glutamyl-tRNA amidotransferase subunit B-like GO:0016884 GYO_0932 5549b50bf0bf3ccbc16c9e75c04592f2 476 ProSitePatterns PS01234 Glutamyl-tRNA(Gln) amidotransferase subunit B signature. 142 156 - T 14-10-2018 IPR017958 Glutamyl-tRNA(Gln) amidotransferase, subunit B, conserved site GO:0016884 GYO_1849 1dbf658dc5f106b471eeaabb30fd4bce 260 Gene3D G3DSA:3.40.1090.10 97 224 2.0E-19 T 14-10-2018 GYO_1849 1dbf658dc5f106b471eeaabb30fd4bce 260 Gene3D G3DSA:3.40.1090.10 1 96 1.1E-23 T 14-10-2018 GYO_1849 1dbf658dc5f106b471eeaabb30fd4bce 260 SUPERFAMILY SSF52151 3 252 1.1E-55 T 14-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GYO_1849 1dbf658dc5f106b471eeaabb30fd4bce 260 Pfam PF01734 Patatin-like phospholipase 8 164 4.2E-22 T 14-10-2018 IPR002641 Patatin-like phospholipase domain GO:0006629 GYO_1849 1dbf658dc5f106b471eeaabb30fd4bce 260 ProSitePatterns PS01237 Uncharacterized protein family UPF0028 signature. 11 43 - T 14-10-2018 IPR001423 Lysophospholipase patatin, conserved site GO:0004622|GO:0046470 Reactome: R-HSA-6814848 GYO_3516 e046f1e0352aea47b61d5f00724843c0 657 Gene3D G3DSA:2.120.10.30 148 299 2.0E-21 T 14-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like GYO_3516 e046f1e0352aea47b61d5f00724843c0 657 Gene3D G3DSA:2.120.10.30 3 147 9.6E-30 T 14-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like GYO_3516 e046f1e0352aea47b61d5f00724843c0 657 SUPERFAMILY SSF82171 14 390 1.83E-56 T 14-10-2018 GYO_3516 e046f1e0352aea47b61d5f00724843c0 657 Pfam PF07676 WD40-like Beta Propeller Repeat 182 208 5.8E-8 T 14-10-2018 IPR011659 WD40-like Beta Propeller GYO_3516 e046f1e0352aea47b61d5f00724843c0 657 Pfam PF07676 WD40-like Beta Propeller Repeat 231 254 0.099 T 14-10-2018 IPR011659 WD40-like Beta Propeller GYO_3516 e046f1e0352aea47b61d5f00724843c0 657 Pfam PF07676 WD40-like Beta Propeller Repeat 60 88 8.9E-8 T 14-10-2018 IPR011659 WD40-like Beta Propeller GYO_3516 e046f1e0352aea47b61d5f00724843c0 657 Pfam PF00326 Prolyl oligopeptidase family 448 657 3.4E-57 T 14-10-2018 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 GYO_3516 e046f1e0352aea47b61d5f00724843c0 657 SUPERFAMILY SSF53474 401 657 1.85E-70 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold GYO_3516 e046f1e0352aea47b61d5f00724843c0 657 Gene3D G3DSA:3.40.50.1820 403 657 2.8E-75 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold GYO_0870 c11d4f7f2d438c9ff74852ed6ae42335 835 Gene3D G3DSA:1.25.40.10 600 826 3.2E-18 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 GYO_0870 c11d4f7f2d438c9ff74852ed6ae42335 835 SUPERFAMILY SSF52540 167 354 8.13E-20 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase GYO_0870 c11d4f7f2d438c9ff74852ed6ae42335 835 Pfam PF13176 Tetratricopeptide repeat 740 767 8.2E-5 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 GYO_0870 c11d4f7f2d438c9ff74852ed6ae42335 835 SMART SM00028 738 770 7.1 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 GYO_0870 c11d4f7f2d438c9ff74852ed6ae42335 835 SMART SM00028 699 732 60.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 GYO_0870 c11d4f7f2d438c9ff74852ed6ae42335 835 SMART SM00028 777 810 23.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 GYO_0870 c11d4f7f2d438c9ff74852ed6ae42335 835 SUPERFAMILY SSF48452 699 815 2.02E-14 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 GYO_0870 c11d4f7f2d438c9ff74852ed6ae42335 835 SMART SM00382 192 341 7.1E-5 T 14-10-2018 IPR003593 AAA+ ATPase domain GYO_0870 c11d4f7f2d438c9ff74852ed6ae42335 835 Pfam PF00931 NB-ARC domain 182 354 1.4E-10 T 14-10-2018 IPR002182 NB-ARC GO:0043531 Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-6798695|Reactome: R-HSA-6803207|Reactome: R-HSA-8953750 GYO_0870 c11d4f7f2d438c9ff74852ed6ae42335 835 Gene3D G3DSA:3.40.50.300 158 371 5.7E-20 T 14-10-2018 GYO_0885 d9207c1c8ec8e8169f48efe07cfd2052 271 SUPERFAMILY SSF53474 1 266 6.51E-56 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold GYO_0885 d9207c1c8ec8e8169f48efe07cfd2052 271 Gene3D G3DSA:3.40.50.1820 5 265 2.9E-56 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold GYO_0885 d9207c1c8ec8e8169f48efe07cfd2052 271 Pfam PF12697 Alpha/beta hydrolase family 23 257 2.2E-17 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 GYO_1230 373fea5aaae6c07255b30a77914705b0 337 Gene3D G3DSA:3.10.350.10 24 78 1.3E-15 T 14-10-2018 IPR036779 LysM domain superfamily GYO_1230 373fea5aaae6c07255b30a77914705b0 337 Gene3D G3DSA:3.10.350.10 147 201 1.1E-19 T 14-10-2018 IPR036779 LysM domain superfamily GYO_1230 373fea5aaae6c07255b30a77914705b0 337 Gene3D G3DSA:3.10.350.10 82 136 1.0E-20 T 14-10-2018 IPR036779 LysM domain superfamily GYO_1230 373fea5aaae6c07255b30a77914705b0 337 Gene3D G3DSA:3.90.1720.10 214 337 4.1E-33 T 14-10-2018 GYO_1230 373fea5aaae6c07255b30a77914705b0 337 SUPERFAMILY SSF54106 149 193 9.68E-12 T 14-10-2018 GYO_1230 373fea5aaae6c07255b30a77914705b0 337 SUPERFAMILY SSF54106 26 70 2.49E-10 T 14-10-2018 GYO_1230 373fea5aaae6c07255b30a77914705b0 337 SUPERFAMILY SSF54106 86 128 6.54E-13 T 14-10-2018 GYO_1230 373fea5aaae6c07255b30a77914705b0 337 SUPERFAMILY SSF54001 216 337 2.22E-34 T 14-10-2018 IPR038765 Papain-like cysteine peptidase superfamily GYO_1230 373fea5aaae6c07255b30a77914705b0 337 Pfam PF00877 NlpC/P60 family 235 335 1.2E-27 T 14-10-2018 IPR000064 Endopeptidase, NLPC/P60 domain GYO_1230 373fea5aaae6c07255b30a77914705b0 337 Pfam PF01476 LysM domain 152 193 2.6E-16 T 14-10-2018 IPR018392 LysM domain GYO_1230 373fea5aaae6c07255b30a77914705b0 337 Pfam PF01476 LysM domain 29 69 7.1E-15 T 14-10-2018 IPR018392 LysM domain GYO_1230 373fea5aaae6c07255b30a77914705b0 337 Pfam PF01476 LysM domain 87 128 1.3E-16 T 14-10-2018 IPR018392 LysM domain GYO_1230 373fea5aaae6c07255b30a77914705b0 337 SMART SM00257 27 70 7.4E-15 T 14-10-2018 IPR018392 LysM domain GYO_1230 373fea5aaae6c07255b30a77914705b0 337 SMART SM00257 151 194 3.4E-19 T 14-10-2018 IPR018392 LysM domain GYO_1230 373fea5aaae6c07255b30a77914705b0 337 SMART SM00257 86 129 6.6E-20 T 14-10-2018 IPR018392 LysM domain GYO_0737 0317eb66eb3ce49b00d6a9fc4ccb8b44 230 SMART SM00895 94 217 9.3E-19 T 14-10-2018 IPR011711 GntR, C-terminal GYO_0737 0317eb66eb3ce49b00d6a9fc4ccb8b44 230 SMART SM00345 14 73 5.9E-17 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 GYO_0737 0317eb66eb3ce49b00d6a9fc4ccb8b44 230 Pfam PF07729 FCD domain 95 216 8.0E-24 T 14-10-2018 IPR011711 GntR, C-terminal GYO_0737 0317eb66eb3ce49b00d6a9fc4ccb8b44 230 Gene3D G3DSA:1.10.10.10 7 74 4.5E-21 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily GYO_0737 0317eb66eb3ce49b00d6a9fc4ccb8b44 230 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 33 47 7.2E-8 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 GYO_0737 0317eb66eb3ce49b00d6a9fc4ccb8b44 230 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 47 63 7.2E-8 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 GYO_0737 0317eb66eb3ce49b00d6a9fc4ccb8b44 230 SUPERFAMILY SSF46785 1 77 1.27E-20 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily GYO_0737 0317eb66eb3ce49b00d6a9fc4ccb8b44 230 Gene3D G3DSA:1.20.120.530 87 224 1.2E-24 T 14-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal GYO_0737 0317eb66eb3ce49b00d6a9fc4ccb8b44 230 SUPERFAMILY SSF48008 91 221 1.05E-23 T 14-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal GYO_0737 0317eb66eb3ce49b00d6a9fc4ccb8b44 230 Pfam PF00392 Bacterial regulatory proteins, gntR family 11 73 3.3E-17 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 GYO_1731 3b0a5fe6de14ac630d451fd9ef212a98 266 SUPERFAMILY SSF55797 143 262 1.1E-26 T 14-10-2018 IPR035940 CAP superfamily GYO_1731 3b0a5fe6de14ac630d451fd9ef212a98 266 TIGRFAM TIGR02909 spore_YkwD: uncharacterized protein, YkwD family 143 265 5.9E-64 T 14-10-2018 IPR014258 CAP domain, YkwD-like GYO_1731 3b0a5fe6de14ac630d451fd9ef212a98 266 Gene3D G3DSA:3.40.33.10 17 264 1.5E-66 T 14-10-2018 IPR035940 CAP superfamily GYO_1731 3b0a5fe6de14ac630d451fd9ef212a98 266 Pfam PF00188 Cysteine-rich secretory protein family 151 262 2.0E-24 T 14-10-2018 IPR014044 CAP domain GYO_2112 3de3c0d64dcfa40782d1d0355cebfe2e 533 SUPERFAMILY SSF49899 326 532 4.35E-69 T 14-10-2018 IPR013320 Concanavalin A-like lectin/glucanase domain superfamily GYO_2112 3de3c0d64dcfa40782d1d0355cebfe2e 533 SUPERFAMILY SSF75005 4 320 1.71E-106 T 14-10-2018 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily GYO_2112 3de3c0d64dcfa40782d1d0355cebfe2e 533 Gene3D G3DSA:2.60.120.200 327 533 8.6E-60 T 14-10-2018 GYO_2112 3de3c0d64dcfa40782d1d0355cebfe2e 533 Gene3D G3DSA:2.115.10.20 1 326 4.1E-112 T 14-10-2018 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily GYO_2112 3de3c0d64dcfa40782d1d0355cebfe2e 533 Pfam PF04616 Glycosyl hydrolases family 43 5 301 1.0E-108 T 14-10-2018 IPR006710 Glycoside hydrolase, family 43 GO:0004553|GO:0005975 GYO_2461 91f6da627d25ba5e3ba0829e242d2143 232 Pfam PF07261 Replication initiation and membrane attachment 131 200 8.1E-24 T 14-10-2018 IPR006343 DnaD domain GYO_2461 91f6da627d25ba5e3ba0829e242d2143 232 TIGRFAM TIGR01446 DnaD_dom: DnaD domain protein 129 200 1.1E-25 T 14-10-2018 IPR006343 DnaD domain GYO_2461 91f6da627d25ba5e3ba0829e242d2143 232 Gene3D G3DSA:1.10.10.630 124 200 3.5E-30 T 14-10-2018 IPR034829 DnaD-like domain superfamily GYO_2461 91f6da627d25ba5e3ba0829e242d2143 232 Gene3D G3DSA:1.10.10.10 1 115 2.8E-42 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily GYO_2461 91f6da627d25ba5e3ba0829e242d2143 232 SUPERFAMILY SSF158499 130 195 2.22E-19 T 14-10-2018 IPR034829 DnaD-like domain superfamily GYO_3066 adc1330ab60af76ae4db368a7ec3b92a 420 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 311 389 1.2E-18 T 14-10-2018 IPR019489 Clp ATPase, C-terminal GYO_3066 adc1330ab60af76ae4db368a7ec3b92a 420 Hamap MF_00175 ATP-dependent Clp protease ATP-binding subunit ClpX [clpX]. 2 409 53.391 T 14-10-2018 IPR004487 Clp protease, ATP-binding subunit ClpX GO:0005524|GO:0006457|GO:0051082 GYO_3066 adc1330ab60af76ae4db368a7ec3b92a 420 Pfam PF06689 ClpX C4-type zinc finger 12 48 2.6E-20 T 14-10-2018 IPR010603 Zinc finger, ClpX C4-type GO:0008270|GO:0046983 GYO_3066 adc1330ab60af76ae4db368a7ec3b92a 420 TIGRFAM TIGR00382 clpX: ATP-dependent Clp protease, ATP-binding subunit ClpX 1 405 5.8E-218 T 14-10-2018 IPR004487 Clp protease, ATP-binding subunit ClpX GO:0005524|GO:0006457|GO:0051082 GYO_3066 adc1330ab60af76ae4db368a7ec3b92a 420 SMART SM00994 10 49 8.0E-24 T 14-10-2018 IPR010603 Zinc finger, ClpX C4-type GO:0008270|GO:0046983 GYO_3066 adc1330ab60af76ae4db368a7ec3b92a 420 SUPERFAMILY SSF57716 11 46 1.71E-11 T 14-10-2018 GYO_3066 adc1330ab60af76ae4db368a7ec3b92a 420 Gene3D G3DSA:3.40.50.300 53 309 4.3E-107 T 14-10-2018 GYO_3066 adc1330ab60af76ae4db368a7ec3b92a 420 SMART SM00382 108 269 3.4E-10 T 14-10-2018 IPR003593 AAA+ ATPase domain GYO_3066 adc1330ab60af76ae4db368a7ec3b92a 420 SUPERFAMILY SSF52540 59 392 2.21E-78 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase GYO_3066 adc1330ab60af76ae4db368a7ec3b92a 420 Gene3D G3DSA:1.10.8.60 310 418 1.7E-37 T 14-10-2018 GYO_3066 adc1330ab60af76ae4db368a7ec3b92a 420 SMART SM01086 311 405 2.9E-33 T 14-10-2018 IPR019489 Clp ATPase, C-terminal GYO_3066 adc1330ab60af76ae4db368a7ec3b92a 420 Gene3D G3DSA:3.30.50.30 3 50 1.0E-21 T 14-10-2018 IPR038366 Zinc finger, ClpX C4-type superfamily GYO_3066 adc1330ab60af76ae4db368a7ec3b92a 420 Pfam PF07724 AAA domain (Cdc48 subfamily) 109 305 4.1E-51 T 14-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 GYO_1090 1a3d541362a1c2f675f9405c9adfc578 604 Pfam PF00005 ABC transporter 382 531 3.2E-33 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 GYO_1090 1a3d541362a1c2f675f9405c9adfc578 604 Pfam PF00664 ABC transporter transmembrane region 49 320 8.3E-64 T 14-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 GYO_1090 1a3d541362a1c2f675f9405c9adfc578 604 SUPERFAMILY SSF52540 355 602 1.13E-89 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase GYO_1090 1a3d541362a1c2f675f9405c9adfc578 604 SUPERFAMILY SSF90123 30 352 3.79E-88 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 GYO_1090 1a3d541362a1c2f675f9405c9adfc578 604 SMART SM00382 391 577 1.3E-15 T 14-10-2018 IPR003593 AAA+ ATPase domain GYO_1090 1a3d541362a1c2f675f9405c9adfc578 604 Gene3D G3DSA:3.40.50.300 357 604 1.9E-89 T 14-10-2018 GYO_1090 1a3d541362a1c2f675f9405c9adfc578 604 Gene3D G3DSA:1.20.1560.10 14 352 1.9E-108 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 GYO_1090 1a3d541362a1c2f675f9405c9adfc578 604 ProSitePatterns PS00211 ABC transporters family signature. 503 517 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 GYO_1203 9cac433a2f03e02ead730900706d566b 193 Pfam PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) 16 189 1.1E-32 T 14-10-2018 IPR019076 Sporulation lipoprotein YhcN/YlaJ-like GYO_1203 9cac433a2f03e02ead730900706d566b 193 TIGRFAM TIGR02898 spore_YhcN_YlaJ: sporulation lipoprotein, YhcN/YlaJ family 8 190 2.8E-49 T 14-10-2018 IPR014247 Sporulation lipoprotein YhcN/YlaJ GO:0030435 GYO_3176 0b5093fbf82514aa22a14f7cb93ef77f 1115 Pfam PF14579 Helix-hairpin-helix motif 777 864 6.6E-26 T 14-10-2018 IPR029460 DNA polymerase, helix-hairpin-helix motif KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 GYO_3176 0b5093fbf82514aa22a14f7cb93ef77f 1115 Pfam PF02811 PHP domain 5 161 1.3E-30 T 14-10-2018 IPR004013 PHP domain GO:0003824 GYO_3176 0b5093fbf82514aa22a14f7cb93ef77f 1115 Gene3D G3DSA:1.10.150.870 761 851 5.7E-7 T 14-10-2018 GYO_3176 0b5093fbf82514aa22a14f7cb93ef77f 1115 TIGRFAM TIGR00594 polc: DNA polymerase III, alpha subunit 3 991 0.0 T 14-10-2018 IPR004805 DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 GYO_3176 0b5093fbf82514aa22a14f7cb93ef77f 1115 Pfam PF01336 OB-fold nucleic acid binding domain 964 1030 2.4E-7 T 14-10-2018 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 GYO_3176 0b5093fbf82514aa22a14f7cb93ef77f 1115 Pfam PF07733 Bacterial DNA polymerase III alpha subunit 281 703 7.9E-176 T 14-10-2018 IPR011708 Bacterial DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 GYO_3176 0b5093fbf82514aa22a14f7cb93ef77f 1115 Gene3D G3DSA:1.10.10.1600 414 491 2.2E-23 T 14-10-2018 GYO_3176 0b5093fbf82514aa22a14f7cb93ef77f 1115 SUPERFAMILY SSF89550 3 249 2.16E-16 T 14-10-2018 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 GYO_3176 0b5093fbf82514aa22a14f7cb93ef77f 1115 Gene3D G3DSA:3.20.20.140 1 260 6.9E-70 T 14-10-2018 GYO_3176 0b5093fbf82514aa22a14f7cb93ef77f 1115 SMART SM00481 4 71 6.7E-23 T 14-10-2018 IPR003141 Polymerase/histidinol phosphatase, N-terminal GYO_2038 62f9f59917e91b16d179dbef9a3ac8b1 241 SUPERFAMILY SSF46785 2 84 3.26E-22 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily GYO_2038 62f9f59917e91b16d179dbef9a3ac8b1 241 SMART SM00866 95 233 1.3E-28 T 14-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 GYO_2038 62f9f59917e91b16d179dbef9a3ac8b1 241 SMART SM00345 14 73 4.9E-22 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 GYO_2038 62f9f59917e91b16d179dbef9a3ac8b1 241 Pfam PF07702 UTRA domain 96 233 2.7E-33 T 14-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 GYO_2038 62f9f59917e91b16d179dbef9a3ac8b1 241 Pfam PF00392 Bacterial regulatory proteins, gntR family 10 73 2.4E-21 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 GYO_2038 62f9f59917e91b16d179dbef9a3ac8b1 241 Gene3D G3DSA:3.40.1410.10 77 239 2.0E-32 T 14-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily GYO_2038 62f9f59917e91b16d179dbef9a3ac8b1 241 SUPERFAMILY SSF64288 62 239 8.64E-41 T 14-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily GYO_2038 62f9f59917e91b16d179dbef9a3ac8b1 241 Gene3D G3DSA:1.10.10.10 2 74 1.4E-23 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily GYO_2038 62f9f59917e91b16d179dbef9a3ac8b1 241 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 33 47 7.6E-9 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 GYO_2038 62f9f59917e91b16d179dbef9a3ac8b1 241 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 47 63 7.6E-9 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 GYO_1636 5040b3df9f5f757aece42c907166e734 367 Gene3D G3DSA:1.25.40.10 175 367 1.9E-19 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 GYO_1636 5040b3df9f5f757aece42c907166e734 367 Pfam PF00535 Glycosyl transferase family 2 7 132 4.2E-22 T 14-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 GYO_1636 5040b3df9f5f757aece42c907166e734 367 SUPERFAMILY SSF53448 1 93 3.99E-28 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases GYO_1636 5040b3df9f5f757aece42c907166e734 367 SMART SM00028 237 270 13.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 GYO_1636 5040b3df9f5f757aece42c907166e734 367 SMART SM00028 271 304 19.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 GYO_1636 5040b3df9f5f757aece42c907166e734 367 SMART SM00028 198 231 370.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 GYO_1636 5040b3df9f5f757aece42c907166e734 367 SMART SM00028 316 349 10.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 GYO_1636 5040b3df9f5f757aece42c907166e734 367 SUPERFAMILY SSF48452 246 358 4.94E-17 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 GYO_1636 5040b3df9f5f757aece42c907166e734 367 Gene3D G3DSA:3.90.550.10 1 151 1.9E-28 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases GYO_2425 ead53d45078bd7c63bf7f0871ecf1ce3 296 SUPERFAMILY SSF47807 175 288 5.68E-27 T 14-10-2018 IPR036279 5'-3' exonuclease, C-terminal domain superfamily GYO_2425 ead53d45078bd7c63bf7f0871ecf1ce3 296 SUPERFAMILY SSF88723 4 157 1.46E-45 T 14-10-2018 IPR029060 PIN-like domain superfamily GYO_2425 ead53d45078bd7c63bf7f0871ecf1ce3 296 Gene3D G3DSA:3.40.50.1010 6 277 2.5E-80 T 14-10-2018 GYO_2425 ead53d45078bd7c63bf7f0871ecf1ce3 296 Pfam PF01367 5'-3' exonuclease, C-terminal SAM fold 175 262 2.4E-26 T 14-10-2018 IPR020045 DNA polymerase I-like, H3TH domain GO:0003677|GO:0003824 GYO_2425 ead53d45078bd7c63bf7f0871ecf1ce3 296 Pfam PF02739 5'-3' exonuclease, N-terminal resolvase-like domain 5 173 1.2E-48 T 14-10-2018 IPR020046 5'-3' exonuclease, alpha-helical arch, N-terminal GO:0003677 GYO_2425 ead53d45078bd7c63bf7f0871ecf1ce3 296 Gene3D G3DSA:1.10.150.20 178 250 2.5E-80 T 14-10-2018 GYO_2425 ead53d45078bd7c63bf7f0871ecf1ce3 296 SMART SM00475 4 265 1.2E-138 T 14-10-2018 IPR002421 5'-3' exonuclease, N-terminal GO:0003677 GYO_2425 ead53d45078bd7c63bf7f0871ecf1ce3 296 SMART SM00279 177 212 1.6E-18 T 14-10-2018 IPR008918 Helix-hairpin-helix motif, class 2 GO:0003677|GO:0003824 GYO_0957 4c5dd8544ed94e5a6f38fc57f7ad695d 427 Gene3D G3DSA:3.40.190.10 35 370 4.2E-163 T 14-10-2018 GYO_0957 4c5dd8544ed94e5a6f38fc57f7ad695d 427 Gene3D G3DSA:3.40.190.10 145 419 4.2E-163 T 14-10-2018 GYO_0957 4c5dd8544ed94e5a6f38fc57f7ad695d 427 SUPERFAMILY SSF53850 18 424 2.52E-56 T 14-10-2018 GYO_0957 4c5dd8544ed94e5a6f38fc57f7ad695d 427 Pfam PF13416 Bacterial extracellular solute-binding protein 52 355 4.9E-23 T 14-10-2018 IPR006059 Bacterial extracellular solute-binding protein GYO_1826 9402d71222a4c05dc4e886606cc5aec6 93 SUPERFAMILY SSF140404 6 84 1.83E-36 T 14-10-2018 IPR036270 UPF0358 superfamily GYO_1826 9402d71222a4c05dc4e886606cc5aec6 93 Hamap MF_01560 UPF0358 protein . 3 93 26.77 T 14-10-2018 IPR009983 Uncharacterised protein family UPF0358 GYO_1826 9402d71222a4c05dc4e886606cc5aec6 93 Gene3D G3DSA:1.10.287.750 4 92 8.0E-37 T 14-10-2018 IPR036270 UPF0358 superfamily GYO_1826 9402d71222a4c05dc4e886606cc5aec6 93 Pfam PF07408 Protein of unknown function (DUF1507) 9 90 8.6E-41 T 14-10-2018 IPR009983 Uncharacterised protein family UPF0358 GYO_3401 d1e407e8789ce287c85c6ffb49a67daa 424 SUPERFAMILY SSF51658 2 417 6.22E-79 T 14-10-2018 IPR036237 Xylose isomerase-like superfamily GYO_3401 d1e407e8789ce287c85c6ffb49a67daa 424 Hamap MF_00541 L-rhamnose isomerase [rhaA]. 1 424 261.766 T 14-10-2018 IPR009308 Rhamnose isomerase GO:0008740|GO:0019299|GO:0030145 KEGG: 00051+5.3.1.14 GYO_3401 d1e407e8789ce287c85c6ffb49a67daa 424 ProDom PD042532 ISOMERASE L-RHAMNOSE METAL-BINDING METABOLISM RHAMNOSE MANGANESE ENZYME KINASE 3D-STRUCTURE RHAA/RHAB 7 397 0.0 T 14-10-2018 GYO_3401 d1e407e8789ce287c85c6ffb49a67daa 424 Gene3D G3DSA:3.20.20.150 1 418 6.1E-192 T 14-10-2018 GYO_3401 d1e407e8789ce287c85c6ffb49a67daa 424 Pfam PF06134 L-rhamnose isomerase (RhaA) 1 417 9.3E-253 T 14-10-2018 IPR009308 Rhamnose isomerase GO:0008740|GO:0019299|GO:0030145 KEGG: 00051+5.3.1.14 GYO_3401 d1e407e8789ce287c85c6ffb49a67daa 424 TIGRFAM TIGR01748 rhaA: L-rhamnose isomerase 3 417 2.7E-247 T 14-10-2018 IPR009308 Rhamnose isomerase GO:0008740|GO:0019299|GO:0030145 KEGG: 00051+5.3.1.14 GYO_2114 bf7707735d2badab7d08266d7942677d 445 PRINTS PR00688 Xylose isomerase signature 139 159 2.6E-99 T 14-10-2018 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 GYO_2114 bf7707735d2badab7d08266d7942677d 445 PRINTS PR00688 Xylose isomerase signature 98 120 2.6E-99 T 14-10-2018 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 GYO_2114 bf7707735d2badab7d08266d7942677d 445 PRINTS PR00688 Xylose isomerase signature 339 350 2.6E-99 T 14-10-2018 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 GYO_2114 bf7707735d2badab7d08266d7942677d 445 PRINTS PR00688 Xylose isomerase signature 213 232 2.6E-99 T 14-10-2018 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 GYO_2114 bf7707735d2badab7d08266d7942677d 445 PRINTS PR00688 Xylose isomerase signature 235 259 2.6E-99 T 14-10-2018 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 GYO_2114 bf7707735d2badab7d08266d7942677d 445 PRINTS PR00688 Xylose isomerase signature 277 304 2.6E-99 T 14-10-2018 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 GYO_2114 bf7707735d2badab7d08266d7942677d 445 PRINTS PR00688 Xylose isomerase signature 162 181 2.6E-99 T 14-10-2018 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 GYO_2114 bf7707735d2badab7d08266d7942677d 445 PRINTS PR00688 Xylose isomerase signature 186 207 2.6E-99 T 14-10-2018 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 GYO_2114 bf7707735d2badab7d08266d7942677d 445 PRINTS PR00688 Xylose isomerase signature 306 317 2.6E-99 T 14-10-2018 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 GYO_2114 bf7707735d2badab7d08266d7942677d 445 Hamap MF_00455 Xylose isomerase [xylA]. 18 442 55.343 T 14-10-2018 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 GYO_2114 bf7707735d2badab7d08266d7942677d 445 SUPERFAMILY SSF51658 10 444 4.42E-176 T 14-10-2018 IPR036237 Xylose isomerase-like superfamily GYO_2114 bf7707735d2badab7d08266d7942677d 445 Pfam PF01261 Xylose isomerase-like TIM barrel 158 292 4.3E-8 T 14-10-2018 IPR013022 Xylose isomerase-like, TIM barrel domain GYO_2114 bf7707735d2badab7d08266d7942677d 445 TIGRFAM TIGR02630 xylose_isom_A: xylose isomerase 11 442 8.1E-221 T 14-10-2018 IPR013452 Xylose isomerase, bacterial-type GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 GYO_2114 bf7707735d2badab7d08266d7942677d 445 Gene3D G3DSA:3.20.20.150 10 445 2.8E-189 T 14-10-2018 GYO_1912 3c15c69d942b9ee7b696daa854eb2ca8 162 SUPERFAMILY SSF75615 111 160 3.14E-10 T 14-10-2018 GYO_1912 3c15c69d942b9ee7b696daa854eb2ca8 162 SUPERFAMILY SSF51735 1 100 1.89E-19 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily GYO_1912 3c15c69d942b9ee7b696daa854eb2ca8 162 Pfam PF13241 Putative NAD(P)-binding 5 111 1.6E-24 T 14-10-2018 GYO_1912 3c15c69d942b9ee7b696daa854eb2ca8 162 TIGRFAM TIGR01470 cysG_Nterm: siroheme synthase, N-terminal domain 2 149 6.0E-32 T 14-10-2018 IPR006367 Sirohaem synthase, N-terminal GO:0006779|GO:0019354|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 GYO_1912 3c15c69d942b9ee7b696daa854eb2ca8 162 Gene3D G3DSA:3.40.50.720 1 127 1.8E-37 T 14-10-2018 GYO_2333 73bf4de50be2556a8a631136a804cd5c 495 PIRSF PIRSF036492 43 494 2.1E-83 T 14-10-2018 IPR012394 Aldehyde dehydrogenase NAD(P)-dependent GO:0006081|GO:0055114 GYO_2333 73bf4de50be2556a8a631136a804cd5c 495 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 265 272 - T 14-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 GYO_2333 73bf4de50be2556a8a631136a804cd5c 495 SUPERFAMILY SSF53720 12 492 1.57E-186 T 14-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 GYO_2333 73bf4de50be2556a8a631136a804cd5c 495 Pfam PF00171 Aldehyde dehydrogenase family 29 489 6.0E-192 T 14-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 GYO_2333 73bf4de50be2556a8a631136a804cd5c 495 Gene3D G3DSA:3.40.309.10 274 494 7.7E-86 T 14-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 GYO_2333 73bf4de50be2556a8a631136a804cd5c 495 Gene3D G3DSA:3.40.605.10 12 273 1.8E-116 T 14-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 GYO_4468 89917f95bd131f3b020b4e5fc547c276 149 Gene3D G3DSA:3.10.430.100 60 149 1.1E-31 T 14-10-2018 IPR036791 Ribosomal protein L9, C-terminal domain superfamily GYO_4468 89917f95bd131f3b020b4e5fc547c276 149 Pfam PF01281 Ribosomal protein L9, N-terminal domain 1 46 1.1E-22 T 14-10-2018 IPR020070 Ribosomal protein L9, N-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 GYO_4468 89917f95bd131f3b020b4e5fc547c276 149 ProSitePatterns PS00651 Ribosomal protein L9 signature. 13 40 - T 14-10-2018 IPR020070 Ribosomal protein L9, N-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 GYO_4468 89917f95bd131f3b020b4e5fc547c276 149 Gene3D G3DSA:3.40.5.10 1 52 2.3E-24 T 14-10-2018 IPR036935 Ribosomal protein L9, N-terminal domain superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 GYO_4468 89917f95bd131f3b020b4e5fc547c276 149 SUPERFAMILY SSF55653 56 148 1.83E-28 T 14-10-2018 IPR036791 Ribosomal protein L9, C-terminal domain superfamily GYO_4468 89917f95bd131f3b020b4e5fc547c276 149 SUPERFAMILY SSF55658 1 56 4.88E-17 T 14-10-2018 IPR009027 Ribosomal protein L9/RNase H1, N-terminal GYO_4468 89917f95bd131f3b020b4e5fc547c276 149 TIGRFAM TIGR00158 L9: ribosomal protein bL9 1 148 2.0E-55 T 14-10-2018 IPR020594 Ribosomal protein L9, bacteria/chloroplast GO:0003735|GO:0005622|GO:0005840|GO:0006412 GYO_4468 89917f95bd131f3b020b4e5fc547c276 149 Pfam PF03948 Ribosomal protein L9, C-terminal domain 63 146 1.4E-29 T 14-10-2018 IPR020069 Ribosomal protein L9, C-terminal GYO_4468 89917f95bd131f3b020b4e5fc547c276 149 Hamap MF_00503 50S ribosomal protein L9 [rplI]. 1 148 25.425 T 14-10-2018 IPR020594 Ribosomal protein L9, bacteria/chloroplast GO:0003735|GO:0005622|GO:0005840|GO:0006412 GYO_3673 753330c50c2ecb23ff8acfe340d02591 119 Gene3D G3DSA:1.10.3730.20 1 108 2.1E-37 T 14-10-2018 GYO_3673 753330c50c2ecb23ff8acfe340d02591 119 SUPERFAMILY SSF103481 5 103 8.5E-20 T 14-10-2018 GYO_3673 753330c50c2ecb23ff8acfe340d02591 119 Pfam PF00893 Small Multidrug Resistance protein 2 93 1.4E-33 T 14-10-2018 IPR000390 Small multidrug resistance protein family GO:0016021 GYO_3911 f96884fea8573ba1ba255465363d1196 389 SUPERFAMILY SSF53756 1 385 7.85E-66 T 14-10-2018 GYO_3911 f96884fea8573ba1ba255465363d1196 389 Pfam PF13439 Glycosyltransferase Family 4 24 198 1.5E-16 T 14-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 GYO_3911 f96884fea8573ba1ba255465363d1196 389 Gene3D G3DSA:3.40.50.2000 208 353 3.5E-29 T 14-10-2018 GYO_3911 f96884fea8573ba1ba255465363d1196 389 Gene3D G3DSA:3.40.50.2000 1 207 3.3E-26 T 14-10-2018 GYO_3911 f96884fea8573ba1ba255465363d1196 389 Pfam PF00534 Glycosyl transferases group 1 206 350 8.9E-31 T 14-10-2018 IPR001296 Glycosyl transferase, family 1 GYO_2895 0c3188b844846e519e4ae9126d4c3d9a 244 Gene3D G3DSA:3.40.50.720 1 196 5.2E-38 T 14-10-2018 GYO_2895 0c3188b844846e519e4ae9126d4c3d9a 244 Pfam PF03807 NADP oxidoreductase coenzyme F420-dependent 2 89 3.3E-12 T 14-10-2018 IPR028939 Pyrroline-5-carboxylate reductase, catalytic, N-terminal GYO_2895 0c3188b844846e519e4ae9126d4c3d9a 244 SUPERFAMILY SSF51735 2 191 7.48E-29 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily GYO_3697 d80d976c2089fdb062b5091ef2f9e993 223 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 40 211 8.7E-23 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 GYO_3697 d80d976c2089fdb062b5091ef2f9e993 223 Gene3D G3DSA:1.10.3720.10 13 210 1.2E-31 T 14-10-2018 IPR035906 MetI-like superfamily GYO_3697 d80d976c2089fdb062b5091ef2f9e993 223 SUPERFAMILY SSF161098 17 197 9.38E-36 T 14-10-2018 IPR035906 MetI-like superfamily GYO_1377 4cf7a358dc6e406d52664e4c9cc2f48b 57 Pfam PF09388 Spo0E like sporulation regulatory protein 3 38 4.9E-13 T 14-10-2018 IPR018540 Aspartyl-phosphate phosphatase Spo0E-like GO:0043937 GYO_1377 4cf7a358dc6e406d52664e4c9cc2f48b 57 SUPERFAMILY SSF140500 1 42 1.31E-13 T 14-10-2018 IPR037208 Aspartyl-phosphate phosphatase Spo0E-like superfamily GO:0043937 GYO_1377 4cf7a358dc6e406d52664e4c9cc2f48b 57 Gene3D G3DSA:1.20.58.990 1 56 4.5E-14 T 14-10-2018 IPR037208 Aspartyl-phosphate phosphatase Spo0E-like superfamily GO:0043937 GYO_2186 2167ec7a44f2d481638e309c55f6eb4a 296 TIGRFAM TIGR01099 galU: UTP--glucose-1-phosphate uridylyltransferase 4 264 4.4E-122 T 14-10-2018 IPR005771 UTP--glucose-1-phosphate uridylyltransferase, bacterial/archaeal-type GO:0003983|GO:0006011 KEGG: 00040+2.7.7.9|KEGG: 00052+2.7.7.9|KEGG: 00500+2.7.7.9|KEGG: 00520+2.7.7.9|MetaCyc: PWY-3801|MetaCyc: PWY-6527|MetaCyc: PWY-7238|MetaCyc: PWY-7343|MetaCyc: PWY-7817 GYO_2186 2167ec7a44f2d481638e309c55f6eb4a 296 Gene3D G3DSA:3.90.550.10 1 291 3.6E-88 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases GYO_2186 2167ec7a44f2d481638e309c55f6eb4a 296 Pfam PF00483 Nucleotidyl transferase 6 265 3.7E-32 T 14-10-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 GYO_2186 2167ec7a44f2d481638e309c55f6eb4a 296 SUPERFAMILY SSF53448 4 275 2.02E-64 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases GYO_2658 91d846415271bfc5e2da1674c885c361 472 TIGRFAM TIGR02330 prpD: 2-methylcitrate dehydratase 5 471 5.5E-261 T 14-10-2018 IPR012705 2-methylcitrate dehydratase PrpD GO:0019629|GO:0047547|GO:0051537 KEGG: 00640+4.2.1.79 GYO_2658 91d846415271bfc5e2da1674c885c361 472 Pfam PF03972 MmgE/PrpD family 9 454 8.4E-151 T 14-10-2018 IPR005656 MmgE/PrpD GO:0016829 GYO_2658 91d846415271bfc5e2da1674c885c361 472 Gene3D G3DSA:1.10.4100.10 14 450 7.0E-188 T 14-10-2018 GYO_2658 91d846415271bfc5e2da1674c885c361 472 Gene3D G3DSA:3.30.1330.120 277 415 7.0E-188 T 14-10-2018 GYO_2658 91d846415271bfc5e2da1674c885c361 472 SUPERFAMILY SSF103378 4 471 1.44E-155 T 14-10-2018 IPR036148 MmgE/PrpD superfamily GO:0016829 GYO_3435 e30da7340d479dab0c235ba8ae739ada 205 SUPERFAMILY SSF53098 5 179 1.39E-27 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily GYO_3435 e30da7340d479dab0c235ba8ae739ada 205 Pfam PF00929 Exonuclease 7 173 1.6E-26 T 14-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III GYO_3435 e30da7340d479dab0c235ba8ae739ada 205 Gene3D G3DSA:3.30.420.10 2 202 9.7E-38 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 GYO_3435 e30da7340d479dab0c235ba8ae739ada 205 SMART SM00479 5 182 4.5E-34 T 14-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III GYO_1473 b4e1ba676ca384d89a6c0106ab4e900a 67 TIGRFAM TIGR01683 thiS: thiamine biosynthesis protein ThiS 4 67 6.7E-23 T 14-10-2018 IPR010035 ThiS, thiamine-biosynthesis GYO_1473 b4e1ba676ca384d89a6c0106ab4e900a 67 Gene3D G3DSA:3.10.20.30 2 67 4.7E-20 T 14-10-2018 IPR012675 Beta-grasp domain superfamily GYO_1473 b4e1ba676ca384d89a6c0106ab4e900a 67 SUPERFAMILY SSF54285 3 66 3.11E-17 T 14-10-2018 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp GYO_1473 b4e1ba676ca384d89a6c0106ab4e900a 67 Pfam PF02597 ThiS family 9 67 1.9E-10 T 14-10-2018 IPR003749 Sulfur carrier ThiS/MoaD-like Reactome: R-HSA-947581 GYO_1310 281ea4bbc8138d6084c7bb86bf20d0e9 470 SUPERFAMILY SSF54373 308 415 1.11E-33 T 14-10-2018 GYO_1310 281ea4bbc8138d6084c7bb86bf20d0e9 470 Gene3D G3DSA:3.50.50.60 9 456 3.1E-153 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily GYO_1310 281ea4bbc8138d6084c7bb86bf20d0e9 470 SUPERFAMILY SSF51905 6 461 2.78E-49 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily GYO_1310 281ea4bbc8138d6084c7bb86bf20d0e9 470 Gene3D G3DSA:1.10.3110.10 110 203 3.1E-153 T 14-10-2018 GYO_1310 281ea4bbc8138d6084c7bb86bf20d0e9 470 Gene3D G3DSA:3.90.660.20 44 414 3.1E-153 T 14-10-2018 GYO_1310 281ea4bbc8138d6084c7bb86bf20d0e9 470 Pfam PF01593 Flavin containing amine oxidoreductase 15 463 5.9E-75 T 14-10-2018 IPR002937 Amine oxidase GO:0016491|GO:0055114 GYO_1310 281ea4bbc8138d6084c7bb86bf20d0e9 470 TIGRFAM TIGR00562 proto_IX_ox: protoporphyrinogen oxidase 5 470 3.7E-195 T 14-10-2018 IPR004572 Protoporphyrinogen oxidase GO:0004729|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.4|MetaCyc: PWY-7159|Reactome: R-HSA-189451 GYO_1945 9a91346c95e018355372183e171eaaf2 329 Gene3D G3DSA:1.20.120.140 20 318 1.4E-115 T 14-10-2018 GYO_1945 9a91346c95e018355372183e171eaaf2 329 TIGRFAM TIGR00064 ftsY: signal recognition particle-docking protein FtsY 46 320 3.4E-120 T 14-10-2018 IPR004390 Signal-recognition particle receptor FtsY GO:0006614 GYO_1945 9a91346c95e018355372183e171eaaf2 329 SMART SM00382 119 297 1.3E-11 T 14-10-2018 IPR003593 AAA+ ATPase domain GYO_1945 9a91346c95e018355372183e171eaaf2 329 ProSitePatterns PS00300 SRP54-type proteins GTP-binding domain signature. 294 307 - T 14-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 GYO_1945 9a91346c95e018355372183e171eaaf2 329 SUPERFAMILY SSF47364 18 96 1.2E-21 T 14-10-2018 IPR036225 SRP/SRP receptor, N-terminal Reactome: R-HSA-1799339 GYO_1945 9a91346c95e018355372183e171eaaf2 329 Pfam PF00448 SRP54-type protein, GTPase domain 121 320 1.0E-81 T 14-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 GYO_1945 9a91346c95e018355372183e171eaaf2 329 SMART SM00962 120 321 6.0E-122 T 14-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 GYO_1945 9a91346c95e018355372183e171eaaf2 329 Gene3D G3DSA:3.40.50.300 113 309 1.4E-115 T 14-10-2018 GYO_1945 9a91346c95e018355372183e171eaaf2 329 Hamap MF_00920 Signal recognition particle receptor FtsY [ftsY]. 46 321 66.509 T 14-10-2018 IPR004390 Signal-recognition particle receptor FtsY GO:0006614 GYO_1945 9a91346c95e018355372183e171eaaf2 329 SUPERFAMILY SSF52540 120 320 6.47E-52 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase GYO_1945 9a91346c95e018355372183e171eaaf2 329 Pfam PF02881 SRP54-type protein, helical bundle domain 34 99 5.6E-15 T 14-10-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 GYO_1945 9a91346c95e018355372183e171eaaf2 329 SMART SM00963 22 103 1.0E-25 T 14-10-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 GYO_3072 d0879ee7633c434a2138336e5525cc5d 365 SUPERFAMILY SSF53659 4 356 5.58E-123 T 14-10-2018 GYO_3072 d0879ee7633c434a2138336e5525cc5d 365 ProSitePatterns PS00470 Isocitrate and isopropylmalate dehydrogenases signature. 244 263 - T 14-10-2018 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-71403 GYO_3072 d0879ee7633c434a2138336e5525cc5d 365 Hamap MF_01033 3-isopropylmalate dehydrogenase [leuB]. 3 356 50.368 T 14-10-2018 IPR004429 Isopropylmalate dehydrogenase GO:0003862|GO:0005737|GO:0009098|GO:0055114 KEGG: 00290+1.1.1.85|KEGG: 00660+1.1.1.85|MetaCyc: PWY-7396 GYO_3072 d0879ee7633c434a2138336e5525cc5d 365 SMART SM01329 4 352 4.3E-202 T 14-10-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 GYO_3072 d0879ee7633c434a2138336e5525cc5d 365 Gene3D G3DSA:3.40.718.10 2 365 3.4E-154 T 14-10-2018 GYO_3072 d0879ee7633c434a2138336e5525cc5d 365 TIGRFAM TIGR00169 leuB: 3-isopropylmalate dehydrogenase 4 351 3.2E-174 T 14-10-2018 IPR004429 Isopropylmalate dehydrogenase GO:0003862|GO:0005737|GO:0009098|GO:0055114 KEGG: 00290+1.1.1.85|KEGG: 00660+1.1.1.85|MetaCyc: PWY-7396 GYO_3072 d0879ee7633c434a2138336e5525cc5d 365 Pfam PF00180 Isocitrate/isopropylmalate dehydrogenase 5 352 6.3E-145 T 14-10-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 GYO_1546 fe01674e13a07e60183090592ef533dd 333 Gene3D G3DSA:1.10.260.40 1 59 1.0E-22 T 14-10-2018 GYO_1546 fe01674e13a07e60183090592ef533dd 333 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 13 23 3.0E-5 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 GYO_1546 fe01674e13a07e60183090592ef533dd 333 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 3 13 3.0E-5 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 GYO_1546 fe01674e13a07e60183090592ef533dd 333 Pfam PF00356 Bacterial regulatory proteins, lacI family 3 48 1.4E-18 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 GYO_1546 fe01674e13a07e60183090592ef533dd 333 Gene3D G3DSA:3.40.50.2300 60 307 3.1E-67 T 14-10-2018 GYO_1546 fe01674e13a07e60183090592ef533dd 333 SUPERFAMILY SSF47413 1 59 1.13E-18 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 GYO_1546 fe01674e13a07e60183090592ef533dd 333 Gene3D G3DSA:3.40.50.2300 159 288 3.1E-67 T 14-10-2018 GYO_1546 fe01674e13a07e60183090592ef533dd 333 ProSitePatterns PS00356 LacI-type HTH domain signature. 4 22 - T 14-10-2018 GYO_1546 fe01674e13a07e60183090592ef533dd 333 SUPERFAMILY SSF53822 61 329 1.06E-71 T 14-10-2018 IPR028082 Periplasmic binding protein-like I GYO_1546 fe01674e13a07e60183090592ef533dd 333 Pfam PF13377 Periplasmic binding protein-like domain 167 328 1.1E-35 T 14-10-2018 GYO_1546 fe01674e13a07e60183090592ef533dd 333 SMART SM00354 1 71 3.0E-31 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 GYO_2674 e0b89062de04ce66f70aa3611bccdc37 425 Gene3D G3DSA:3.90.220.20 3 413 1.6E-96 T 14-10-2018 GYO_2674 e0b89062de04ce66f70aa3611bccdc37 425 SUPERFAMILY SSF116734 3 196 6.38E-44 T 14-10-2018 GYO_2674 e0b89062de04ce66f70aa3611bccdc37 425 Gene3D G3DSA:3.90.220.20 222 367 1.6E-96 T 14-10-2018 GYO_2674 e0b89062de04ce66f70aa3611bccdc37 425 Gene3D G3DSA:1.10.287.1120 148 410 1.6E-96 T 14-10-2018 GYO_2674 e0b89062de04ce66f70aa3611bccdc37 425 Pfam PF01420 Type I restriction modification DNA specificity domain 2 178 3.2E-24 T 14-10-2018 IPR000055 Restriction endonuclease, type I, HsdS GO:0003677|GO:0006304 GYO_2674 e0b89062de04ce66f70aa3611bccdc37 425 SUPERFAMILY SSF116734 205 418 3.43E-38 T 14-10-2018 GYO_2065 51cd1de381700adcca113359753a5443 288 PIRSF PIRSF000446 1 288 2.2E-122 T 14-10-2018 IPR024925 Malonyl CoA-acyl carrier protein transacylase KEGG: 00061+2.3.1.39|MetaCyc: PWY-4381|MetaCyc: PWY-6799|MetaCyc: PWY-7388 GYO_2065 51cd1de381700adcca113359753a5443 288 Gene3D G3DSA:3.30.70.250 120 188 6.0E-106 T 14-10-2018 GYO_2065 51cd1de381700adcca113359753a5443 288 SUPERFAMILY SSF55048 121 178 6.41E-14 T 14-10-2018 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding GYO_2065 51cd1de381700adcca113359753a5443 288 SUPERFAMILY SSF52151 1 284 8.89E-65 T 14-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GYO_2065 51cd1de381700adcca113359753a5443 288 Gene3D G3DSA:3.40.366.10 4 276 6.0E-106 T 14-10-2018 IPR001227 Acyl transferase domain superfamily GO:0016740 GYO_2065 51cd1de381700adcca113359753a5443 288 TIGRFAM TIGR00128 fabD: malonyl CoA-acyl carrier protein transacylase 1 282 1.1E-131 T 14-10-2018 IPR004410 Malonyl CoA-acyl carrier protein transacylase, FabD-type GO:0004314 KEGG: 00061+2.3.1.39|MetaCyc: PWY-4381|MetaCyc: PWY-6799|MetaCyc: PWY-7388 GYO_2065 51cd1de381700adcca113359753a5443 288 SMART SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. 5 287 5.5E-28 T 14-10-2018 IPR020801 Polyketide synthase, acyl transferase domain GYO_2065 51cd1de381700adcca113359753a5443 288 Pfam PF00698 Acyl transferase domain 3 284 2.3E-38 T 14-10-2018 IPR014043 Acyl transferase GYO_1288 21b8570b0c3b1dc4f80ebf939d0c701d 42 TIGRFAM TIGR01732 tiny_TM_bacill: conserved hypothetical protein 17 41 1.8E-14 T 14-10-2018 IPR010070 Sporulation protein YjcZ-like GYO_1288 21b8570b0c3b1dc4f80ebf939d0c701d 42 Pfam PF09680 Protein of unknown function (Tiny_TM_bacill) 18 41 6.0E-13 T 14-10-2018 IPR010070 Sporulation protein YjcZ-like GYO_3788 92f341661bd12bfb4b5bc86f4cfd186a 198 TIGRFAM TIGR00493 clpP: ATP-dependent Clp endopeptidase, proteolytic subunit ClpP 1 192 1.6E-109 T 14-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 GYO_3788 92f341661bd12bfb4b5bc86f4cfd186a 198 Hamap MF_00444 ATP-dependent Clp protease proteolytic subunit [clpP]. 3 193 44.409 T 14-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 GYO_3788 92f341661bd12bfb4b5bc86f4cfd186a 198 SUPERFAMILY SSF52096 10 193 3.19E-73 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily GYO_3788 92f341661bd12bfb4b5bc86f4cfd186a 198 Pfam PF00574 Clp protease 13 192 6.3E-87 T 14-10-2018 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA GYO_3788 92f341661bd12bfb4b5bc86f4cfd186a 198 ProSitePatterns PS00381 Endopeptidase Clp serine active site. 90 101 - T 14-10-2018 IPR018215 ClpP, Ser active site GYO_3788 92f341661bd12bfb4b5bc86f4cfd186a 198 PRINTS PR00127 Clp protease catalytic subunit P signature 59 79 5.2E-54 T 14-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 GYO_3788 92f341661bd12bfb4b5bc86f4cfd186a 198 PRINTS PR00127 Clp protease catalytic subunit P signature 111 130 5.2E-54 T 14-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 GYO_3788 92f341661bd12bfb4b5bc86f4cfd186a 198 PRINTS PR00127 Clp protease catalytic subunit P signature 168 187 5.2E-54 T 14-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 GYO_3788 92f341661bd12bfb4b5bc86f4cfd186a 198 PRINTS PR00127 Clp protease catalytic subunit P signature 19 34 5.2E-54 T 14-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 GYO_3788 92f341661bd12bfb4b5bc86f4cfd186a 198 PRINTS PR00127 Clp protease catalytic subunit P signature 90 107 5.2E-54 T 14-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 GYO_3788 92f341661bd12bfb4b5bc86f4cfd186a 198 Gene3D G3DSA:3.90.226.10 1 196 4.4E-84 T 14-10-2018 GYO_3788 92f341661bd12bfb4b5bc86f4cfd186a 198 ProSitePatterns PS00382 Endopeptidase Clp histidine active site. 112 125 - T 14-10-2018 IPR033135 ClpP, histidine active site GYO_3489 a0d58b484acab4776f7ac644a9c34f93 539 Gene3D G3DSA:2.30.38.10 354 429 2.1E-34 T 14-10-2018 GYO_3489 a0d58b484acab4776f7ac644a9c34f93 539 Gene3D G3DSA:3.40.50.980 22 179 2.2E-61 T 14-10-2018 GYO_3489 a0d58b484acab4776f7ac644a9c34f93 539 SUPERFAMILY SSF56801 8 531 1.57E-141 T 14-10-2018 GYO_3489 a0d58b484acab4776f7ac644a9c34f93 539 Gene3D G3DSA:3.30.300.310 431 534 2.5E-32 T 14-10-2018 GYO_3489 a0d58b484acab4776f7ac644a9c34f93 539 ProSitePatterns PS00455 Putative AMP-binding domain signature. 187 198 - T 14-10-2018 IPR020845 AMP-binding, conserved site GYO_3489 a0d58b484acab4776f7ac644a9c34f93 539 Pfam PF13193 AMP-binding enzyme C-terminal domain 444 519 6.3E-15 T 14-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain GYO_3489 a0d58b484acab4776f7ac644a9c34f93 539 Pfam PF00501 AMP-binding enzyme 32 435 1.1E-85 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 GYO_3489 a0d58b484acab4776f7ac644a9c34f93 539 Gene3D G3DSA:3.40.50.980 180 353 2.0E-64 T 14-10-2018 GYO_3489 a0d58b484acab4776f7ac644a9c34f93 539 TIGRFAM TIGR02275 DHB_AMP_lig: (2,3-dihydroxybenzoyl)adenylate synthase 4 526 2.3E-276 T 14-10-2018 IPR011963 2,3-dihydroxybenzoate-AMP ligase GO:0008668|GO:0019290 GYO_4294 e0f88e48e034a6ca98441dfd20bf1e0e 218 Pfam PF00196 Bacterial regulatory proteins, luxR family 156 211 2.9E-19 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 GYO_4294 e0f88e48e034a6ca98441dfd20bf1e0e 218 SMART SM00421 154 211 6.3E-25 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 GYO_4294 e0f88e48e034a6ca98441dfd20bf1e0e 218 Pfam PF00072 Response regulator receiver domain 8 120 1.0E-24 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 GYO_4294 e0f88e48e034a6ca98441dfd20bf1e0e 218 ProSitePatterns PS00622 LuxR-type HTH domain signature. 171 198 - T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 GYO_4294 e0f88e48e034a6ca98441dfd20bf1e0e 218 Gene3D G3DSA:3.40.50.12740 6 217 6.3E-70 T 14-10-2018 GYO_4294 e0f88e48e034a6ca98441dfd20bf1e0e 218 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 157 171 1.1E-12 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 GYO_4294 e0f88e48e034a6ca98441dfd20bf1e0e 218 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 187 199 1.1E-12 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 GYO_4294 e0f88e48e034a6ca98441dfd20bf1e0e 218 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 171 187 1.1E-12 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 GYO_4294 e0f88e48e034a6ca98441dfd20bf1e0e 218 SMART SM00448 6 119 5.4E-31 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 GYO_4294 e0f88e48e034a6ca98441dfd20bf1e0e 218 SUPERFAMILY SSF46894 149 217 4.76E-21 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 GYO_4294 e0f88e48e034a6ca98441dfd20bf1e0e 218 SUPERFAMILY SSF52172 5 132 5.41E-32 T 14-10-2018 IPR011006 CheY-like superfamily GYO_3569 4e6ce04664a98ab3071cdc70bfc1821f 406 SUPERFAMILY SSF53383 2 398 1.05E-133 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase GYO_3569 4e6ce04664a98ab3071cdc70bfc1821f 406 Gene3D G3DSA:3.40.640.10 34 294 1.0E-183 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 GYO_3569 4e6ce04664a98ab3071cdc70bfc1821f 406 Pfam PF00266 Aminotransferase class-V 23 391 4.5E-163 T 14-10-2018 IPR000192 Aminotransferase class V domain GYO_3569 4e6ce04664a98ab3071cdc70bfc1821f 406 Gene3D G3DSA:3.90.1150.10 6 395 1.0E-183 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 GYO_3569 4e6ce04664a98ab3071cdc70bfc1821f 406 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 215 234 - T 14-10-2018 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site GYO_3569 4e6ce04664a98ab3071cdc70bfc1821f 406 TIGRFAM TIGR01979 sufS: cysteine desulfurase, SufS family 5 402 1.5E-193 T 14-10-2018 IPR010970 Cysteine desulfurase, SufS GO:0006534|GO:0030170|GO:0031071 KEGG: 00730+2.8.1.7|MetaCyc: PWY-7250 GYO_3569 4e6ce04664a98ab3071cdc70bfc1821f 406 PIRSF PIRSF005572 20 405 7.5E-50 T 14-10-2018 IPR016454 Cysteine desulfurase KEGG: 00730+2.8.1.7|MetaCyc: PWY-7250 GYO_2976 dc99c9309bfa1807b0416d0c2f9f2d64 217 SUPERFAMILY SSF53335 7 216 5.73E-42 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase GYO_2976 dc99c9309bfa1807b0416d0c2f9f2d64 217 Pfam PF01596 O-methyltransferase 31 215 3.4E-28 T 14-10-2018 IPR002935 O-methyltransferase, family 3 GO:0008171 GYO_2976 dc99c9309bfa1807b0416d0c2f9f2d64 217 Gene3D G3DSA:3.40.50.150 4 217 5.0E-63 T 14-10-2018 GYO_3929 7731ebe2613d3297e0f1c6773c36eea8 129 SUPERFAMILY SSF52374 2 125 1.66E-34 T 14-10-2018 GYO_3929 7731ebe2613d3297e0f1c6773c36eea8 129 TIGRFAM TIGR01518 g3p_cytidyltrns: glycerol-3-phosphate cytidylyltransferase 4 126 1.3E-68 T 14-10-2018 IPR006409 Glycerol-3-phosphate cytidylyltransferase GO:0005737|GO:0019350|GO:0046872|GO:0047348 KEGG: 00564+2.7.7.39|MetaCyc: PWY-7815|MetaCyc: PWY-7816|MetaCyc: PWY-7819 GYO_3929 7731ebe2613d3297e0f1c6773c36eea8 129 Pfam PF01467 Cytidylyltransferase-like 5 124 2.6E-23 T 14-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 GYO_3929 7731ebe2613d3297e0f1c6773c36eea8 129 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 4 68 9.3E-22 T 14-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 GYO_3929 7731ebe2613d3297e0f1c6773c36eea8 129 Gene3D G3DSA:3.40.50.620 1 128 1.1E-43 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold GYO_1076 9f4105adb9e34b5036a6109c38e3ea16 342 Pfam PF02779 Transketolase, pyrimidine binding domain 5 192 8.9E-54 T 14-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain GYO_1076 9f4105adb9e34b5036a6109c38e3ea16 342 SMART SM00861 5 192 8.5E-59 T 14-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain GYO_1076 9f4105adb9e34b5036a6109c38e3ea16 342 Pfam PF02780 Transketolase, C-terminal domain 206 328 1.5E-39 T 14-10-2018 IPR033248 Transketolase, C-terminal domain GYO_1076 9f4105adb9e34b5036a6109c38e3ea16 342 Gene3D G3DSA:3.40.50.970 3 204 5.5E-81 T 14-10-2018 GYO_1076 9f4105adb9e34b5036a6109c38e3ea16 342 SUPERFAMILY SSF52518 3 216 6.38E-64 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold GYO_1076 9f4105adb9e34b5036a6109c38e3ea16 342 Gene3D G3DSA:3.40.50.920 205 336 3.2E-44 T 14-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 GYO_1076 9f4105adb9e34b5036a6109c38e3ea16 342 SUPERFAMILY SSF52922 201 336 2.49E-39 T 14-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 GYO_3433 f72b2c69474cb96480083a74ba688414 428 SUPERFAMILY SSF55874 269 424 1.31E-37 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily GYO_3433 f72b2c69474cb96480083a74ba688414 428 SMART SM00388 211 278 2.4E-12 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 GYO_3433 f72b2c69474cb96480083a74ba688414 428 SUPERFAMILY SSF47384 207 275 1.24E-12 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 GYO_3433 f72b2c69474cb96480083a74ba688414 428 Pfam PF00512 His Kinase A (phospho-acceptor) domain 213 275 4.1E-13 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 GYO_3433 f72b2c69474cb96480083a74ba688414 428 PRINTS PR00344 Bacterial sensor protein C-terminal signature 386 404 1.1E-11 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 GYO_3433 f72b2c69474cb96480083a74ba688414 428 PRINTS PR00344 Bacterial sensor protein C-terminal signature 357 371 1.1E-11 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 GYO_3433 f72b2c69474cb96480083a74ba688414 428 PRINTS PR00344 Bacterial sensor protein C-terminal signature 410 423 1.1E-11 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 GYO_3433 f72b2c69474cb96480083a74ba688414 428 SMART SM00387 319 426 1.6E-30 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase GYO_3433 f72b2c69474cb96480083a74ba688414 428 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 319 424 1.9E-20 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase GYO_3433 f72b2c69474cb96480083a74ba688414 428 Gene3D G3DSA:3.30.565.10 278 426 1.5E-37 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily GYO_3433 f72b2c69474cb96480083a74ba688414 428 Gene3D G3DSA:1.10.287.130 198 277 3.6E-17 T 14-10-2018 GYO_2348 d1c29c809894290db55b632ce4a1a18e 221 Pfam PF02585 GlcNAc-PI de-N-acetylase 6 135 5.3E-25 T 14-10-2018 IPR003737 N-acetylglucosaminyl phosphatidylinositol deacetylase-related Reactome: R-HSA-162710 GYO_2348 d1c29c809894290db55b632ce4a1a18e 221 TIGRFAM TIGR04000 thiol_BshB2: bacillithiol biosynthesis deacetylase BshB2 3 219 9.1E-111 T 14-10-2018 IPR023841 Bacillithiol biosynthesis deacetylase BshB2 GYO_2348 d1c29c809894290db55b632ce4a1a18e 221 Gene3D G3DSA:3.40.50.10320 1 217 7.0E-45 T 14-10-2018 IPR024078 Putative deacetylase LmbE-like domain superfamily Reactome: R-HSA-162710 GYO_2348 d1c29c809894290db55b632ce4a1a18e 221 SUPERFAMILY SSF102588 2 211 1.7E-48 T 14-10-2018 IPR024078 Putative deacetylase LmbE-like domain superfamily Reactome: R-HSA-162710 GYO_0109 6d59e1ca6a0b6725021243f1a65c3c11 154 Gene3D G3DSA:1.10.1200.150 74 154 2.3E-28 T 14-10-2018 GYO_0109 6d59e1ca6a0b6725021243f1a65c3c11 154 PIRSF PIRSF010607 1 154 3.7E-67 T 14-10-2018 IPR008463 Transcriptional repressor of class III stress genes GO:0003677|GO:0006355 GYO_0109 6d59e1ca6a0b6725021243f1a65c3c11 154 Gene3D G3DSA:1.10.10.1240 3 73 7.1E-36 T 14-10-2018 GYO_0109 6d59e1ca6a0b6725021243f1a65c3c11 154 Pfam PF05848 Firmicute transcriptional repressor of class III stress genes (CtsR) 4 151 1.9E-57 T 14-10-2018 IPR008463 Transcriptional repressor of class III stress genes GO:0003677|GO:0006355 GYO_0983 a5ebcae8e91e8fb992dc2e726694b637 379 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 287 302 4.8E-18 T 14-10-2018 GYO_0983 a5ebcae8e91e8fb992dc2e726694b637 379 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 157 172 4.8E-18 T 14-10-2018 GYO_0983 a5ebcae8e91e8fb992dc2e726694b637 379 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 302 318 4.8E-18 T 14-10-2018 GYO_0983 a5ebcae8e91e8fb992dc2e726694b637 379 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 13 35 4.8E-18 T 14-10-2018 GYO_0983 a5ebcae8e91e8fb992dc2e726694b637 379 Pfam PF01494 FAD binding domain 14 345 1.7E-35 T 14-10-2018 IPR002938 FAD-binding domain GO:0071949 GYO_0983 a5ebcae8e91e8fb992dc2e726694b637 379 SUPERFAMILY SSF51905 12 356 1.38E-57 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily GYO_0983 a5ebcae8e91e8fb992dc2e726694b637 379 Gene3D G3DSA:3.50.50.60 12 362 1.7E-75 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily GYO_3873 2e650768ed7d7002599f1ce47d84a57f 189 SUPERFAMILY SSF69754 2 107 4.32E-33 T 14-10-2018 IPR036567 Ribosome hibernation promotion factor-like GYO_3873 2e650768ed7d7002599f1ce47d84a57f 189 Gene3D G3DSA:3.30.160.100 1 106 1.1E-30 T 14-10-2018 IPR036567 Ribosome hibernation promotion factor-like GYO_3873 2e650768ed7d7002599f1ce47d84a57f 189 Gene3D G3DSA:3.30.505.50 142 188 3.1E-27 T 14-10-2018 IPR038416 Sigma 54 modulation/S30EA ribosomal protein, C-terminal domain superfamily GYO_3873 2e650768ed7d7002599f1ce47d84a57f 189 TIGRFAM TIGR00741 yfiA: ribosomal subunit interface protein 1 102 2.2E-37 T 14-10-2018 IPR003489 Ribosome hibernation promoting factor/RaiA GO:0044238 GYO_3873 2e650768ed7d7002599f1ce47d84a57f 189 Hamap MF_00839 Ribosome hibernation promoting factor [hpf]. 1 188 24.83 T 14-10-2018 IPR034694 Ribosome hibernation promoting factor, long/plastid GYO_3873 2e650768ed7d7002599f1ce47d84a57f 189 Pfam PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus 129 184 5.8E-29 T 14-10-2018 IPR032528 Sigma 54 modulation/S30EA ribosomal protein, C-terminal GYO_3873 2e650768ed7d7002599f1ce47d84a57f 189 Pfam PF02482 Sigma 54 modulation protein / S30EA ribosomal protein 3 95 4.5E-29 T 14-10-2018 IPR003489 Ribosome hibernation promoting factor/RaiA GO:0044238 GYO_3681 14edbfb795e6f2fe0f851fc1e6546bc1 256 Gene3D G3DSA:3.40.50.1820 7 251 1.8E-40 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold GYO_3681 14edbfb795e6f2fe0f851fc1e6546bc1 256 PRINTS PR00111 Alpha/beta hydrolase fold signature 89 102 1.0E-6 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 GYO_3681 14edbfb795e6f2fe0f851fc1e6546bc1 256 PRINTS PR00111 Alpha/beta hydrolase fold signature 103 116 1.0E-6 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 GYO_3681 14edbfb795e6f2fe0f851fc1e6546bc1 256 PRINTS PR00111 Alpha/beta hydrolase fold signature 45 60 1.0E-6 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 GYO_3681 14edbfb795e6f2fe0f851fc1e6546bc1 256 SUPERFAMILY SSF53474 8 251 3.0E-42 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold GYO_3681 14edbfb795e6f2fe0f851fc1e6546bc1 256 Pfam PF00561 alpha/beta hydrolase fold 22 123 1.0E-12 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 GYO_2160 b6651a421f2ee4de63584f4797fc5410 63 Gene3D G3DSA:1.20.58.990 9 59 1.9E-12 T 14-10-2018 IPR037208 Aspartyl-phosphate phosphatase Spo0E-like superfamily GO:0043937 GYO_2160 b6651a421f2ee4de63584f4797fc5410 63 Pfam PF09388 Spo0E like sporulation regulatory protein 12 53 4.9E-16 T 14-10-2018 IPR018540 Aspartyl-phosphate phosphatase Spo0E-like GO:0043937 GYO_2160 b6651a421f2ee4de63584f4797fc5410 63 SUPERFAMILY SSF140500 10 56 1.83E-15 T 14-10-2018 IPR037208 Aspartyl-phosphate phosphatase Spo0E-like superfamily GO:0043937 GYO_3402 b695c8b07df976e9557d6ec762a4aa13 104 Pfam PF05336 L-rhamnose mutarotase 3 103 7.4E-30 T 14-10-2018 IPR008000 Rhamnose/fucose mutarotase GO:0005737|GO:0016857 GYO_3402 b695c8b07df976e9557d6ec762a4aa13 104 SUPERFAMILY SSF54909 2 104 4.95E-38 T 14-10-2018 IPR011008 Dimeric alpha-beta barrel GYO_3402 b695c8b07df976e9557d6ec762a4aa13 104 Hamap MF_01663 L-rhamnose mutarotase [rhaM]. 1 104 32.099 T 14-10-2018 IPR013448 L-rhamnose mutarotase GO:0005737|GO:0016857|GO:0019299 GYO_3402 b695c8b07df976e9557d6ec762a4aa13 104 TIGRFAM TIGR02625 YiiL_rotase: L-rhamnose mutarotase 3 104 2.3E-50 T 14-10-2018 IPR013448 L-rhamnose mutarotase GO:0005737|GO:0016857|GO:0019299 GYO_3402 b695c8b07df976e9557d6ec762a4aa13 104 Gene3D G3DSA:3.30.70.100 1 97 1.4E-37 T 14-10-2018 GYO_3353 e7c77e1d30556d66f4c6c02d35ae2bea 627 SUPERFAMILY SSF51445 81 508 5.28E-110 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily GYO_3353 e7c77e1d30556d66f4c6c02d35ae2bea 627 SUPERFAMILY SSF51011 516 619 2.16E-30 T 14-10-2018 GYO_3353 e7c77e1d30556d66f4c6c02d35ae2bea 627 SMART SM00642 149 511 1.9E-8 T 14-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 GYO_3353 e7c77e1d30556d66f4c6c02d35ae2bea 627 Pfam PF02806 Alpha amylase, C-terminal all-beta domain 520 618 1.6E-19 T 14-10-2018 IPR006048 Alpha-amylase/branching enzyme, C-terminal all beta GO:0003824|GO:0005975|GO:0043169 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|MetaCyc: PWY-7900 GYO_3353 e7c77e1d30556d66f4c6c02d35ae2bea 627 TIGRFAM TIGR01515 branching_enzym: 1,4-alpha-glucan branching enzyme 10 617 0.0 T 14-10-2018 IPR006407 1,4-alpha-glucan-branching enzyme, GlgB GO:0003844|GO:0005978 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|MetaCyc: PWY-7900 GYO_3353 e7c77e1d30556d66f4c6c02d35ae2bea 627 Pfam PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) 26 108 1.4E-24 T 14-10-2018 IPR004193 Glycoside hydrolase, family 13, N-terminal GO:0004553|GO:0005975 Reactome: R-HSA-3322077|Reactome: R-HSA-3878781 GYO_3353 e7c77e1d30556d66f4c6c02d35ae2bea 627 Gene3D G3DSA:3.20.20.80 125 514 3.6E-149 T 14-10-2018 GYO_3353 e7c77e1d30556d66f4c6c02d35ae2bea 627 PIRSF PIRSF000463 1 627 3.4E-255 T 14-10-2018 IPR037439 1,4-alpha-glucan-branching enzyme GO:0003844|GO:0005978 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|MetaCyc: PWY-7900|Reactome: R-HSA-3322077|Reactome: R-HSA-3878781 GYO_3353 e7c77e1d30556d66f4c6c02d35ae2bea 627 Gene3D G3DSA:2.60.40.1180 515 620 4.2E-31 T 14-10-2018 IPR013780 Glycosyl hydrolase, all-beta GYO_3353 e7c77e1d30556d66f4c6c02d35ae2bea 627 Gene3D G3DSA:2.60.40.10 3 121 1.6E-41 T 14-10-2018 IPR013783 Immunoglobulin-like fold GYO_3353 e7c77e1d30556d66f4c6c02d35ae2bea 627 Pfam PF00128 Alpha amylase, catalytic domain 261 366 7.2E-5 T 14-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 GYO_3353 e7c77e1d30556d66f4c6c02d35ae2bea 627 Pfam PF00128 Alpha amylase, catalytic domain 177 251 4.4E-11 T 14-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 GYO_3353 e7c77e1d30556d66f4c6c02d35ae2bea 627 Hamap MF_00685 1,4-alpha-glucan branching enzyme GlgB [glgB]. 4 619 39.972 T 14-10-2018 IPR006407 1,4-alpha-glucan-branching enzyme, GlgB GO:0003844|GO:0005978 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|MetaCyc: PWY-7900 GYO_3353 e7c77e1d30556d66f4c6c02d35ae2bea 627 SUPERFAMILY SSF81296 39 98 3.92E-10 T 14-10-2018 IPR014756 Immunoglobulin E-set GYO_3386 d65d291c7a9fc9c1b577deed0494d95d 181 Gene3D G3DSA:2.60.40.3490 43 172 4.7E-60 T 14-10-2018 IPR038480 YuaB-like superfamily GYO_3386 d65d291c7a9fc9c1b577deed0494d95d 181 ProDom PD034110 YWEA MEMBRANE YUAB TRANSMEMBRANE ORF-1 47 170 1.0E-64 T 14-10-2018 IPR034650 YuaB-like GYO_2887 57914f4231deb7575895b409494af745 812 SUPERFAMILY SSF55008 81 153 1.83E-20 T 14-10-2018 IPR036163 Heavy metal-associated domain superfamily GO:0030001|GO:0046872 GYO_2887 57914f4231deb7575895b409494af745 812 SUPERFAMILY SSF55008 10 79 1.14E-18 T 14-10-2018 IPR036163 Heavy metal-associated domain superfamily GO:0030001|GO:0046872 GYO_2887 57914f4231deb7575895b409494af745 812 SUPERFAMILY SSF81653 306 402 4.84E-32 T 14-10-2018 IPR008250 P-type ATPase, A domain superfamily Reactome: R-HSA-936837 GYO_2887 57914f4231deb7575895b409494af745 812 TIGRFAM TIGR00003 TIGR00003: copper ion binding protein 16 78 2.6E-11 T 14-10-2018 IPR006122 Heavy metal-associated domain, copper ion-binding GO:0005507 Reactome: R-HSA-936837 GYO_2887 57914f4231deb7575895b409494af745 812 TIGRFAM TIGR00003 TIGR00003: copper ion binding protein 82 145 1.9E-11 T 14-10-2018 IPR006122 Heavy metal-associated domain, copper ion-binding GO:0005507 Reactome: R-HSA-936837 GYO_2887 57914f4231deb7575895b409494af745 812 TIGRFAM TIGR01512 ATPase-IB2_Cd: cadmium-translocating P-type ATPase 268 806 4.5E-124 T 14-10-2018 GYO_2887 57914f4231deb7575895b409494af745 812 Pfam PF00702 haloacid dehalogenase-like hydrolase 500 717 1.4E-42 T 14-10-2018 GYO_2887 57914f4231deb7575895b409494af745 812 Gene3D G3DSA:3.30.70.100 80 155 5.5E-23 T 14-10-2018 GYO_2887 57914f4231deb7575895b409494af745 812 SUPERFAMILY SSF81665 251 775 6.41E-13 T 14-10-2018 IPR023298 P-type ATPase, transmembrane domain superfamily Reactome: R-HSA-936837 GYO_2887 57914f4231deb7575895b409494af745 812 Gene3D G3DSA:2.70.150.20 295 407 1.6E-44 T 14-10-2018 GYO_2887 57914f4231deb7575895b409494af745 812 ProSitePatterns PS01047 Heavy-metal-associated domain. 19 48 - T 14-10-2018 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 GYO_2887 57914f4231deb7575895b409494af745 812 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 275 789 1.5E-94 T 14-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 GYO_2887 57914f4231deb7575895b409494af745 812 Gene3D G3DSA:3.40.1110.10 515 635 2.2E-96 T 14-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 GYO_2887 57914f4231deb7575895b409494af745 812 Pfam PF00403 Heavy-metal-associated domain 17 76 1.6E-13 T 14-10-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 GYO_2887 57914f4231deb7575895b409494af745 812 Pfam PF00403 Heavy-metal-associated domain 85 144 1.4E-15 T 14-10-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 GYO_2887 57914f4231deb7575895b409494af745 812 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 506 512 - T 14-10-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 GYO_2887 57914f4231deb7575895b409494af745 812 ProSitePatterns PS01047 Heavy-metal-associated domain. 87 116 - T 14-10-2018 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 GYO_2887 57914f4231deb7575895b409494af745 812 PRINTS PR00942 Copper-transporting ATPase 1 signature 40 63 1.2E-14 T 14-10-2018 GYO_2887 57914f4231deb7575895b409494af745 812 PRINTS PR00942 Copper-transporting ATPase 1 signature 14 39 1.2E-14 T 14-10-2018 GYO_2887 57914f4231deb7575895b409494af745 812 PRINTS PR00942 Copper-transporting ATPase 1 signature 219 244 1.2E-14 T 14-10-2018 GYO_2887 57914f4231deb7575895b409494af745 812 Gene3D G3DSA:3.30.70.100 7 79 1.4E-20 T 14-10-2018 GYO_2887 57914f4231deb7575895b409494af745 812 SUPERFAMILY SSF56784 502 803 4.4E-62 T 14-10-2018 IPR036412 HAD-like superfamily GYO_2887 57914f4231deb7575895b409494af745 812 Pfam PF00122 E1-E2 ATPase 303 483 1.8E-60 T 14-10-2018 GYO_2887 57914f4231deb7575895b409494af745 812 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 236 805 1.7E-201 T 14-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 GYO_2887 57914f4231deb7575895b409494af745 812 Gene3D G3DSA:3.40.50.1000 485 755 2.2E-96 T 14-10-2018 IPR023214 HAD superfamily GYO_2887 57914f4231deb7575895b409494af745 812 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 504 518 7.5E-27 T 14-10-2018 GYO_2887 57914f4231deb7575895b409494af745 812 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 703 722 7.5E-27 T 14-10-2018 GYO_2887 57914f4231deb7575895b409494af745 812 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 352 366 7.5E-27 T 14-10-2018 GYO_2887 57914f4231deb7575895b409494af745 812 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 628 639 7.5E-27 T 14-10-2018 GYO_2887 57914f4231deb7575895b409494af745 812 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 650 660 7.5E-27 T 14-10-2018 GYO_2887 57914f4231deb7575895b409494af745 812 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 726 738 7.5E-27 T 14-10-2018 GYO_2887 57914f4231deb7575895b409494af745 812 TIGRFAM TIGR01511 ATPase-IB1_Cu: copper-translocating P-type ATPase 217 806 2.0E-187 T 14-10-2018 GYO_4310 d3c3af47811a66356a868994f6b91367 686 SMART SM01060 31 419 7.0E-277 T 14-10-2018 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 GYO_4310 d3c3af47811a66356a868994f6b91367 686 SUPERFAMILY SSF56634 12 528 1.06E-226 T 14-10-2018 IPR020835 Catalase superfamily GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 GYO_4310 d3c3af47811a66356a868994f6b91367 686 ProSitePatterns PS00437 Catalase proximal heme-ligand signature. 361 369 - T 14-10-2018 IPR002226 Catalase haem-binding site GO:0020037 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 GYO_4310 d3c3af47811a66356a868994f6b91367 686 PIRSF PIRSF038927 1 686 0.0 T 14-10-2018 IPR024712 Catalase, mono-functional, haem-containing, clade 2 GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 GYO_4310 d3c3af47811a66356a868994f6b91367 686 Gene3D G3DSA:3.40.50.880 535 686 1.1E-38 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like GYO_4310 d3c3af47811a66356a868994f6b91367 686 Gene3D G3DSA:2.40.180.10 1 441 4.1E-214 T 14-10-2018 IPR037060 Catalase core domain superfamily GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 GYO_4310 d3c3af47811a66356a868994f6b91367 686 Gene3D G3DSA:1.20.1370.20 442 534 8.1E-32 T 14-10-2018 GYO_4310 d3c3af47811a66356a868994f6b91367 686 SUPERFAMILY SSF52317 541 686 9.99E-18 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like GYO_4310 d3c3af47811a66356a868994f6b91367 686 Pfam PF00199 Catalase 31 416 1.7E-181 T 14-10-2018 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 GYO_4310 d3c3af47811a66356a868994f6b91367 686 Pfam PF01965 DJ-1/PfpI family 542 644 3.3E-7 T 14-10-2018 IPR002818 DJ-1/PfpI Reactome: R-HSA-3899300 GYO_4310 d3c3af47811a66356a868994f6b91367 686 Pfam PF06628 Catalase-related immune-responsive 446 510 2.3E-21 T 14-10-2018 IPR010582 Catalase immune-responsive domain KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 GYO_4310 d3c3af47811a66356a868994f6b91367 686 ProSitePatterns PS00438 Catalase proximal active site signature. 67 83 - T 14-10-2018 IPR024708 Catalase active site GO:0004096 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 GYO_4310 d3c3af47811a66356a868994f6b91367 686 PRINTS PR00067 Catalase signature 128 145 3.0E-70 T 14-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 GYO_4310 d3c3af47811a66356a868994f6b91367 686 PRINTS PR00067 Catalase signature 348 374 3.0E-70 T 14-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 GYO_4310 d3c3af47811a66356a868994f6b91367 686 PRINTS PR00067 Catalase signature 44 67 3.0E-70 T 14-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 GYO_4310 d3c3af47811a66356a868994f6b91367 686 PRINTS PR00067 Catalase signature 107 125 3.0E-70 T 14-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 GYO_4310 d3c3af47811a66356a868994f6b91367 686 PRINTS PR00067 Catalase signature 316 343 3.0E-70 T 14-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 GYO_4310 d3c3af47811a66356a868994f6b91367 686 PRINTS PR00067 Catalase signature 147 165 3.0E-70 T 14-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 GYO_2999 61c9183f543ef40f82d9e4cb0006737f 146 Gene3D G3DSA:3.50.80.10 1 146 1.4E-61 T 14-10-2018 IPR023509 D-aminoacyl-tRNA deacylase-like superfamily GYO_2999 61c9183f543ef40f82d9e4cb0006737f 146 TIGRFAM TIGR00256 TIGR00256: D-tyrosyl-tRNA(Tyr) deacylase 1 146 3.5E-72 T 14-10-2018 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0002161|GO:0005737|GO:0051499 GYO_2999 61c9183f543ef40f82d9e4cb0006737f 146 Hamap MF_00518 D-aminoacyl-tRNA deacylase [dtd]. 1 145 36.01 T 14-10-2018 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0002161|GO:0005737|GO:0051499 GYO_2999 61c9183f543ef40f82d9e4cb0006737f 146 Pfam PF02580 D-Tyr-tRNA(Tyr) deacylase 2 144 1.3E-59 T 14-10-2018 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0002161|GO:0005737|GO:0051499 GYO_2999 61c9183f543ef40f82d9e4cb0006737f 146 SUPERFAMILY SSF69500 1 145 4.19E-60 T 14-10-2018 IPR023509 D-aminoacyl-tRNA deacylase-like superfamily GYO_0750 faaaf651b59f5d9c5a2164d717a35e5f 253 Gene3D G3DSA:3.60.15.10 1 252 2.1E-66 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like GYO_0750 faaaf651b59f5d9c5a2164d717a35e5f 253 Pfam PF13483 Beta-lactamase superfamily domain 6 212 9.0E-11 T 14-10-2018 GYO_0750 faaaf651b59f5d9c5a2164d717a35e5f 253 SUPERFAMILY SSF56281 2 253 1.9E-19 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like GYO_0403 63bb9f389f59955d4eab7b423119f4a1 296 Pfam PF03009 Glycerophosphoryl diester phosphodiesterase family 43 284 6.2E-63 T 14-10-2018 IPR030395 Glycerophosphodiester phosphodiesterase domain GO:0006629|GO:0008081 GYO_0403 63bb9f389f59955d4eab7b423119f4a1 296 Gene3D G3DSA:3.20.20.190 26 293 9.4E-119 T 14-10-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily GO:0006629|GO:0008081 GYO_0403 63bb9f389f59955d4eab7b423119f4a1 296 SUPERFAMILY SSF51695 37 289 3.14E-78 T 14-10-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily GO:0006629|GO:0008081 GYO_2901 6109bf0151d52ed1bd1ae7e13be5e6df 123 Pfam PF11337 Protein of unknown function (DUF3139) 1 77 5.0E-7 T 14-10-2018 IPR021486 Protein of unknown function DUF3139 GYO_4483 ecded18b99e73601f760e453caff48e0 292 SUPERFAMILY SSF53850 89 291 2.78E-44 T 14-10-2018 GYO_4483 ecded18b99e73601f760e453caff48e0 292 SUPERFAMILY SSF46785 2 111 1.01E-20 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily GYO_4483 ecded18b99e73601f760e453caff48e0 292 Gene3D G3DSA:1.10.10.10 1 84 8.0E-25 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily GYO_4483 ecded18b99e73601f760e453caff48e0 292 Gene3D G3DSA:3.40.190.290 90 291 3.3E-55 T 14-10-2018 GYO_4483 ecded18b99e73601f760e453caff48e0 292 Pfam PF03466 LysR substrate binding domain 89 290 2.8E-47 T 14-10-2018 IPR005119 LysR, substrate-binding GYO_4483 ecded18b99e73601f760e453caff48e0 292 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 61 7.1E-21 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 GYO_4483 ecded18b99e73601f760e453caff48e0 292 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 3.0E-11 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 GYO_4483 ecded18b99e73601f760e453caff48e0 292 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 3.0E-11 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 GYO_4483 ecded18b99e73601f760e453caff48e0 292 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 3.0E-11 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 GYO_3768 58e599a36f2d50524fe6452477d42d67 381 Gene3D G3DSA:3.40.50.2000 171 355 1.9E-79 T 14-10-2018 GYO_3768 58e599a36f2d50524fe6452477d42d67 381 SUPERFAMILY SSF53756 18 369 7.33E-80 T 14-10-2018 GYO_3768 58e599a36f2d50524fe6452477d42d67 381 Pfam PF00534 Glycosyl transferases group 1 184 350 3.3E-45 T 14-10-2018 IPR001296 Glycosyl transferase, family 1 GYO_3768 58e599a36f2d50524fe6452477d42d67 381 Pfam PF13439 Glycosyltransferase Family 4 25 167 7.5E-19 T 14-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 GYO_3768 58e599a36f2d50524fe6452477d42d67 381 Gene3D G3DSA:3.40.50.2000 26 368 1.9E-79 T 14-10-2018 GYO_3000 ec64480900ce902cf59353bcf2b349f3 734 Pfam PF13328 HD domain 31 180 1.3E-50 T 14-10-2018 IPR003607 HD/PDEase domain GYO_3000 ec64480900ce902cf59353bcf2b349f3 734 SUPERFAMILY SSF81271 381 453 1.4E-22 T 14-10-2018 IPR012676 TGS-like KEGG: 00970+6.1.1.3 GYO_3000 ec64480900ce902cf59353bcf2b349f3 734 Gene3D G3DSA:3.10.20.30 387 459 1.6E-31 T 14-10-2018 IPR012675 Beta-grasp domain superfamily GYO_3000 ec64480900ce902cf59353bcf2b349f3 734 SMART SM00954 240 350 1.2E-70 T 14-10-2018 IPR007685 RelA/SpoT GO:0015969 GYO_3000 ec64480900ce902cf59353bcf2b349f3 734 SUPERFAMILY SSF81301 185 398 2.29E-67 T 14-10-2018 GYO_3000 ec64480900ce902cf59353bcf2b349f3 734 Gene3D G3DSA:3.30.460.10 198 329 9.8E-54 T 14-10-2018 GYO_3000 ec64480900ce902cf59353bcf2b349f3 734 SUPERFAMILY SSF109604 10 196 5.65E-76 T 14-10-2018 GYO_3000 ec64480900ce902cf59353bcf2b349f3 734 Pfam PF02824 TGS domain 394 453 4.2E-23 T 14-10-2018 IPR004095 TGS KEGG: 00970+6.1.1.3 GYO_3000 ec64480900ce902cf59353bcf2b349f3 734 Pfam PF04607 Region found in RelA / SpoT proteins 240 350 1.5E-39 T 14-10-2018 IPR007685 RelA/SpoT GO:0015969 GYO_3000 ec64480900ce902cf59353bcf2b349f3 734 SMART SM00471 46 158 3.0E-8 T 14-10-2018 IPR003607 HD/PDEase domain GYO_3000 ec64480900ce902cf59353bcf2b349f3 734 Gene3D G3DSA:1.10.3210.10 1 196 1.5E-87 T 14-10-2018 GYO_3000 ec64480900ce902cf59353bcf2b349f3 734 TIGRFAM TIGR00691 spoT_relA: RelA/SpoT family protein 31 731 3.0E-260 T 14-10-2018 IPR004811 RelA/SpoT family GO:0015969 GYO_3000 ec64480900ce902cf59353bcf2b349f3 734 Pfam PF13291 ACT domain 654 731 8.8E-21 T 14-10-2018 IPR002912 ACT domain GYO_3000 ec64480900ce902cf59353bcf2b349f3 734 SUPERFAMILY SSF55021 657 734 3.04E-12 T 14-10-2018 GYO_3000 ec64480900ce902cf59353bcf2b349f3 734 Gene3D G3DSA:3.30.70.260 655 734 1.0E-17 T 14-10-2018 GYO_1395 4f0ccbf9f555d987588362848fb58409 212 Pfam PF13599 Pentapeptide repeats (9 copies) 69 136 1.4E-11 T 14-10-2018 IPR001646 Pentapeptide repeat GYO_1395 4f0ccbf9f555d987588362848fb58409 212 Pfam PF00805 Pentapeptide repeats (8 copies) 149 182 1.2E-6 T 14-10-2018 IPR001646 Pentapeptide repeat GYO_1395 4f0ccbf9f555d987588362848fb58409 212 Gene3D G3DSA:2.160.20.100 1 212 5.8E-51 T 14-10-2018 GYO_1395 4f0ccbf9f555d987588362848fb58409 212 SUPERFAMILY SSF141571 35 211 3.14E-41 T 14-10-2018 GYO_1372 323fd0ae51e1d9c47dacd15741208aad 113 ProDom PD031981 GERMINATION SPORE GERPE PE PROBABLE SPORULATION 1 100 9.0E-49 T 14-10-2018 IPR024496 Spore germination protein GerPE GYO_1372 323fd0ae51e1d9c47dacd15741208aad 113 Pfam PF10970 Spore germination protein GerPE 1 106 2.6E-45 T 14-10-2018 IPR024496 Spore germination protein GerPE GYO_1881 ac1ed207ec34a1295090e2be01af04f5 264 SUPERFAMILY SSF52540 2 233 2.42E-49 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase GYO_1881 ac1ed207ec34a1295090e2be01af04f5 264 SMART SM00382 27 220 2.5E-10 T 14-10-2018 IPR003593 AAA+ ATPase domain GYO_1881 ac1ed207ec34a1295090e2be01af04f5 264 ProSitePatterns PS00211 ABC transporters family signature. 142 156 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 GYO_1881 ac1ed207ec34a1295090e2be01af04f5 264 Pfam PF00005 ABC transporter 18 169 1.5E-25 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 GYO_1881 ac1ed207ec34a1295090e2be01af04f5 264 Gene3D G3DSA:3.40.50.300 1 252 7.6E-61 T 14-10-2018 GYO_3211 558ad428be0dd9f6ebb20c1bff5f28dd 579 SUPERFAMILY SSF55073 428 575 1.02E-38 T 14-10-2018 IPR029787 Nucleotide cyclase GYO_3211 558ad428be0dd9f6ebb20c1bff5f28dd 579 Gene3D G3DSA:3.30.450.40 127 265 2.9E-10 T 14-10-2018 IPR029016 GAF-like domain superfamily GYO_3211 558ad428be0dd9f6ebb20c1bff5f28dd 579 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 419 574 2.1E-40 T 14-10-2018 IPR000160 GGDEF domain GYO_3211 558ad428be0dd9f6ebb20c1bff5f28dd 579 SUPERFAMILY SSF55781 128 274 4.42E-10 T 14-10-2018 GYO_3211 558ad428be0dd9f6ebb20c1bff5f28dd 579 Gene3D G3DSA:3.30.450.40 266 417 1.6E-10 T 14-10-2018 IPR029016 GAF-like domain superfamily GYO_3211 558ad428be0dd9f6ebb20c1bff5f28dd 579 Gene3D G3DSA:3.30.70.270 418 574 3.0E-45 T 14-10-2018 GYO_3211 558ad428be0dd9f6ebb20c1bff5f28dd 579 Pfam PF00990 Diguanylate cyclase, GGDEF domain 424 571 3.1E-43 T 14-10-2018 IPR000160 GGDEF domain GYO_3211 558ad428be0dd9f6ebb20c1bff5f28dd 579 SMART SM00267 412 575 5.7E-60 T 14-10-2018 IPR000160 GGDEF domain GYO_3211 558ad428be0dd9f6ebb20c1bff5f28dd 579 SUPERFAMILY SSF55781 267 418 2.14E-10 T 14-10-2018 GYO_3953 40282249f38fd624d9d5717fa6ea6793 493 SMART SM00382 276 470 8.1E-6 T 14-10-2018 IPR003593 AAA+ ATPase domain GYO_3953 40282249f38fd624d9d5717fa6ea6793 493 SMART SM00382 27 224 1.1E-10 T 14-10-2018 IPR003593 AAA+ ATPase domain GYO_3953 40282249f38fd624d9d5717fa6ea6793 493 SUPERFAMILY SSF52540 3 225 5.95E-59 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase GYO_3953 40282249f38fd624d9d5717fa6ea6793 493 Gene3D G3DSA:3.40.50.300 1 237 1.4E-60 T 14-10-2018 GYO_3953 40282249f38fd624d9d5717fa6ea6793 493 ProSitePatterns PS00211 ABC transporters family signature. 140 154 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 GYO_3953 40282249f38fd624d9d5717fa6ea6793 493 ProSitePatterns PS00211 ABC transporters family signature. 394 408 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 GYO_3953 40282249f38fd624d9d5717fa6ea6793 493 Gene3D G3DSA:3.40.50.300 238 489 2.1E-44 T 14-10-2018 GYO_3953 40282249f38fd624d9d5717fa6ea6793 493 Pfam PF00005 ABC transporter 268 421 2.3E-20 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 GYO_3953 40282249f38fd624d9d5717fa6ea6793 493 SUPERFAMILY SSF52540 242 480 2.33E-46 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase GYO_3953 40282249f38fd624d9d5717fa6ea6793 493 Pfam PF00005 ABC transporter 18 168 1.8E-31 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 GYO_0973 b1888d232a59636b62af200915869cc6 446 SUPERFAMILY SSF51735 9 171 1.6E-38 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily GYO_0973 b1888d232a59636b62af200915869cc6 446 Pfam PF11975 Family 4 glycosyl hydrolase C-terminal domain 205 425 6.8E-48 T 14-10-2018 IPR022616 Glycosyl hydrolase, family 4, C-terminal GO:0004553 GYO_0973 b1888d232a59636b62af200915869cc6 446 PRINTS PR00732 Glycosyl hydrolase family 4 signature 201 213 3.6E-38 T 14-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 GYO_0973 b1888d232a59636b62af200915869cc6 446 PRINTS PR00732 Glycosyl hydrolase family 4 signature 76 92 3.6E-38 T 14-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 GYO_0973 b1888d232a59636b62af200915869cc6 446 PRINTS PR00732 Glycosyl hydrolase family 4 signature 168 179 3.6E-38 T 14-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 GYO_0973 b1888d232a59636b62af200915869cc6 446 PRINTS PR00732 Glycosyl hydrolase family 4 signature 113 133 3.6E-38 T 14-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 GYO_0973 b1888d232a59636b62af200915869cc6 446 PRINTS PR00732 Glycosyl hydrolase family 4 signature 142 159 3.6E-38 T 14-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 GYO_0973 b1888d232a59636b62af200915869cc6 446 PRINTS PR00732 Glycosyl hydrolase family 4 signature 97 110 3.6E-38 T 14-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 GYO_0973 b1888d232a59636b62af200915869cc6 446 PRINTS PR00732 Glycosyl hydrolase family 4 signature 11 26 3.6E-38 T 14-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 GYO_0973 b1888d232a59636b62af200915869cc6 446 Pfam PF02056 Family 4 glycosyl hydrolase 11 188 2.3E-68 T 14-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 GYO_0973 b1888d232a59636b62af200915869cc6 446 Gene3D G3DSA:3.90.1820.20 5 445 2.9E-171 T 14-10-2018 GYO_0973 b1888d232a59636b62af200915869cc6 446 SUPERFAMILY SSF56327 172 443 8.63E-45 T 14-10-2018 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 GYO_0973 b1888d232a59636b62af200915869cc6 446 ProSitePatterns PS01324 Glycosyl hydrolases family 4 signature. 142 173 - T 14-10-2018 IPR019802 Glycoside hydrolase, family 4, conserved site GO:0004553|GO:0005975 GYO_2269 88e959c42db29d5364ca80df403cf3be 90 Gene3D G3DSA:3.40.1580.10 3 89 5.1E-18 T 14-10-2018 IPR037883 Knr4/Smi1-like domain superfamily GYO_2269 88e959c42db29d5364ca80df403cf3be 90 SMART SM00860 13 70 6.7E-6 T 14-10-2018 IPR018958 Knr4/Smi1-like domain GYO_2269 88e959c42db29d5364ca80df403cf3be 90 SUPERFAMILY SSF160631 4 82 2.75E-17 T 14-10-2018 GYO_2269 88e959c42db29d5364ca80df403cf3be 90 Pfam PF09346 SMI1 / KNR4 family (SUKH-1) 13 63 9.0E-12 T 14-10-2018 IPR018958 Knr4/Smi1-like domain GYO_1544 6881a8f618b42e57bdca50810a53cb8a 278 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 86 97 2.7E-7 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR GYO_1544 6881a8f618b42e57bdca50810a53cb8a 278 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 174 193 2.7E-7 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR GYO_1544 6881a8f618b42e57bdca50810a53cb8a 278 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 154 162 2.7E-7 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR GYO_1544 6881a8f618b42e57bdca50810a53cb8a 278 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 161 189 - T 14-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 GYO_1544 6881a8f618b42e57bdca50810a53cb8a 278 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 12 29 3.0E-28 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR GYO_1544 6881a8f618b42e57bdca50810a53cb8a 278 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 86 97 3.0E-28 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR GYO_1544 6881a8f618b42e57bdca50810a53cb8a 278 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 195 212 3.0E-28 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR GYO_1544 6881a8f618b42e57bdca50810a53cb8a 278 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 235 255 3.0E-28 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR GYO_1544 6881a8f618b42e57bdca50810a53cb8a 278 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 148 164 3.0E-28 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR GYO_1544 6881a8f618b42e57bdca50810a53cb8a 278 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 174 193 3.0E-28 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR GYO_1544 6881a8f618b42e57bdca50810a53cb8a 278 Pfam PF00106 short chain dehydrogenase 11 214 2.4E-41 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR GYO_1544 6881a8f618b42e57bdca50810a53cb8a 278 Gene3D G3DSA:3.40.50.720 3 278 1.5E-71 T 14-10-2018 GYO_1544 6881a8f618b42e57bdca50810a53cb8a 278 SUPERFAMILY SSF51735 10 274 1.09E-62 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily GYO_3662 7ce90cedddcf260de05641666ba6daff 699 Gene3D G3DSA:3.40.50.1000 377 643 4.6E-81 T 14-10-2018 IPR023214 HAD superfamily GYO_3662 7ce90cedddcf260de05641666ba6daff 699 SUPERFAMILY SSF55008 2 70 1.22E-10 T 14-10-2018 IPR036163 Heavy metal-associated domain superfamily GO:0030001|GO:0046872 GYO_3662 7ce90cedddcf260de05641666ba6daff 699 SUPERFAMILY SSF81653 197 294 1.09E-22 T 14-10-2018 IPR008250 P-type ATPase, A domain superfamily Reactome: R-HSA-936837 GYO_3662 7ce90cedddcf260de05641666ba6daff 699 Gene3D G3DSA:3.30.70.100 3 85 2.0E-10 T 14-10-2018 GYO_3662 7ce90cedddcf260de05641666ba6daff 699 Pfam PF00403 Heavy-metal-associated domain 8 59 4.1E-9 T 14-10-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 GYO_3662 7ce90cedddcf260de05641666ba6daff 699 SUPERFAMILY SSF56784 396 691 6.79E-60 T 14-10-2018 IPR036412 HAD-like superfamily GYO_3662 7ce90cedddcf260de05641666ba6daff 699 SUPERFAMILY SSF81665 145 687 5.23E-12 T 14-10-2018 IPR023298 P-type ATPase, transmembrane domain superfamily Reactome: R-HSA-936837 GYO_3662 7ce90cedddcf260de05641666ba6daff 699 ProSitePatterns PS01047 Heavy-metal-associated domain. 7 36 - T 14-10-2018 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 GYO_3662 7ce90cedddcf260de05641666ba6daff 699 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 170 670 4.2E-76 T 14-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 GYO_3662 7ce90cedddcf260de05641666ba6daff 699 Gene3D G3DSA:3.40.1110.10 407 518 4.6E-81 T 14-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 GYO_3662 7ce90cedddcf260de05641666ba6daff 699 Pfam PF00122 E1-E2 ATPase 195 375 2.9E-49 T 14-10-2018 GYO_3662 7ce90cedddcf260de05641666ba6daff 699 PRINTS PR00941 Cadmium-transporting ATPase signature 279 293 1.2E-13 T 14-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 GYO_3662 7ce90cedddcf260de05641666ba6daff 699 PRINTS PR00941 Cadmium-transporting ATPase signature 260 276 1.2E-13 T 14-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 GYO_3662 7ce90cedddcf260de05641666ba6daff 699 PRINTS PR00941 Cadmium-transporting ATPase signature 16 37 1.2E-13 T 14-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 GYO_3662 7ce90cedddcf260de05641666ba6daff 699 PRINTS PR00941 Cadmium-transporting ATPase signature 179 199 1.2E-13 T 14-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 GYO_3662 7ce90cedddcf260de05641666ba6daff 699 PRINTS PR00941 Cadmium-transporting ATPase signature 5 14 1.2E-13 T 14-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 GYO_3662 7ce90cedddcf260de05641666ba6daff 699 Gene3D G3DSA:2.70.150.20 187 299 8.4E-31 T 14-10-2018 GYO_3662 7ce90cedddcf260de05641666ba6daff 699 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 398 404 - T 14-10-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 GYO_3662 7ce90cedddcf260de05641666ba6daff 699 TIGRFAM TIGR01512 ATPase-IB2_Cd: cadmium-translocating P-type ATPase 145 695 3.9E-162 T 14-10-2018 GYO_3662 7ce90cedddcf260de05641666ba6daff 699 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 534 544 1.9E-21 T 14-10-2018 GYO_3662 7ce90cedddcf260de05641666ba6daff 699 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 244 258 1.9E-21 T 14-10-2018 GYO_3662 7ce90cedddcf260de05641666ba6daff 699 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 614 626 1.9E-21 T 14-10-2018 GYO_3662 7ce90cedddcf260de05641666ba6daff 699 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 590 609 1.9E-21 T 14-10-2018 GYO_3662 7ce90cedddcf260de05641666ba6daff 699 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 396 410 1.9E-21 T 14-10-2018 GYO_3662 7ce90cedddcf260de05641666ba6daff 699 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 146 693 3.8E-174 T 14-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 GYO_3662 7ce90cedddcf260de05641666ba6daff 699 Pfam PF00702 haloacid dehalogenase-like hydrolase 392 604 1.6E-37 T 14-10-2018 GYO_1504 9c4a431b648a0e6ed63a1cd643d01176 650 SUPERFAMILY SSF55804 501 648 6.54E-40 T 14-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 GYO_1504 9c4a431b648a0e6ed63a1cd643d01176 650 Gene3D G3DSA:3.40.50.2300 1 104 8.7E-43 T 14-10-2018 GYO_1504 9c4a431b648a0e6ed63a1cd643d01176 650 Gene3D G3DSA:3.40.930.10 494 649 1.6E-43 T 14-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 GYO_1504 9c4a431b648a0e6ed63a1cd643d01176 650 TIGRFAM TIGR00829 FRU: PTS system, Fru family, IIB component 5 86 3.2E-31 T 14-10-2018 IPR003353 Phosphotransferase system, fructose-specific IIB subunit GO:0009401|GO:0022877 KEGG: 00051+2.7.1.202 GYO_1504 9c4a431b648a0e6ed63a1cd643d01176 650 TIGRFAM TIGR01427 PTS_IIC_fructo: PTS system, Fru family, IIC component 114 458 3.1E-95 T 14-10-2018 IPR006327 Phosphotransferase system, fructose IIC component GO:0005351|GO:0008982|GO:0009401|GO:0016021 GYO_1504 9c4a431b648a0e6ed63a1cd643d01176 650 SUPERFAMILY SSF52794 2 103 5.23E-38 T 14-10-2018 IPR036095 PTS system IIB component-like superfamily GO:0008982|GO:0009401 GYO_1504 9c4a431b648a0e6ed63a1cd643d01176 650 ProSitePatterns PS00372 PTS EIIA domains phosphorylation site signature 2. 551 567 - T 14-10-2018 IPR002178 PTS EIIA type-2 domain GYO_1504 9c4a431b648a0e6ed63a1cd643d01176 650 Pfam PF02378 Phosphotransferase system, EIIC 128 403 9.2E-22 T 14-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 GYO_1504 9c4a431b648a0e6ed63a1cd643d01176 650 TIGRFAM TIGR00848 fruA: PTS system, fructose subfamily, IIA component 510 633 2.5E-39 T 14-10-2018 IPR004715 Phosphotransferase system, IIA component fructose subfamily GO:0008982|GO:0009401|GO:0016021 GYO_1504 9c4a431b648a0e6ed63a1cd643d01176 650 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 505 648 2.7E-36 T 14-10-2018 IPR002178 PTS EIIA type-2 domain GYO_1504 9c4a431b648a0e6ed63a1cd643d01176 650 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 5 95 1.4E-17 T 14-10-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 GYO_3634 fae50fcb39c966f3157ed413b0b3481b 136 ProDom PD968187 BETA-DEFENSIN ANTIBIOTIC PRECURSOR ANTIMICROBIAL DEFENSIN BETA SIGNAL DEFENSIN BD-32 DEFB-32 16 129 3.0E-41 T 14-10-2018 GYO_3634 fae50fcb39c966f3157ed413b0b3481b 136 Pfam PF14184 Regulatory protein YrvL 10 132 1.9E-32 T 14-10-2018 IPR025912 Regulatory protein YrvL GYO_2571 97b9c3515ca26d2d3f0051e5e59e62a9 439 Pfam PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain 39 296 1.0E-83 T 14-10-2018 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal GO:0003824 GYO_2571 97b9c3515ca26d2d3f0051e5e59e62a9 439 TIGRFAM TIGR01048 lysA: diaminopimelate decarboxylase 8 430 2.7E-170 T 14-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 GYO_2571 97b9c3515ca26d2d3f0051e5e59e62a9 439 Gene3D G3DSA:2.40.37.10 17 427 3.4E-164 T 14-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 GYO_2571 97b9c3515ca26d2d3f0051e5e59e62a9 439 Gene3D G3DSA:3.20.20.10 38 297 3.4E-164 T 14-10-2018 IPR029066 PLP-binding barrel GYO_2571 97b9c3515ca26d2d3f0051e5e59e62a9 439 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 388 401 8.8E-19 T 14-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 GYO_2571 97b9c3515ca26d2d3f0051e5e59e62a9 439 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 287 306 8.8E-19 T 14-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 GYO_2571 97b9c3515ca26d2d3f0051e5e59e62a9 439 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 83 95 8.8E-19 T 14-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 GYO_2571 97b9c3515ca26d2d3f0051e5e59e62a9 439 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 63 81 8.8E-19 T 14-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 GYO_2571 97b9c3515ca26d2d3f0051e5e59e62a9 439 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 198 211 8.8E-19 T 14-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 GYO_2571 97b9c3515ca26d2d3f0051e5e59e62a9 439 SUPERFAMILY SSF50621 272 431 9.42E-56 T 14-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 GYO_2571 97b9c3515ca26d2d3f0051e5e59e62a9 439 ProSitePatterns PS00879 Orn/DAP/Arg decarboxylases family 2 signature 2. 235 250 - T 14-10-2018 IPR022657 Orn/DAP/Arg decarboxylase 2, conserved site GYO_2571 97b9c3515ca26d2d3f0051e5e59e62a9 439 ProSitePatterns PS00878 Orn/DAP/Arg decarboxylases family 2 pyridoxal-P attachment site. 63 81 - T 14-10-2018 IPR022653 Orn/DAP/Arg decarboxylase 2, pyridoxal-phosphate binding site GYO_2571 97b9c3515ca26d2d3f0051e5e59e62a9 439 PRINTS PR01181 Diaminopimelate decarboxylase signature 81 98 1.6E-31 T 14-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 GYO_2571 97b9c3515ca26d2d3f0051e5e59e62a9 439 PRINTS PR01181 Diaminopimelate decarboxylase signature 316 334 1.6E-31 T 14-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 GYO_2571 97b9c3515ca26d2d3f0051e5e59e62a9 439 PRINTS PR01181 Diaminopimelate decarboxylase signature 170 179 1.6E-31 T 14-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 GYO_2571 97b9c3515ca26d2d3f0051e5e59e62a9 439 PRINTS PR01181 Diaminopimelate decarboxylase signature 398 420 1.6E-31 T 14-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 GYO_2571 97b9c3515ca26d2d3f0051e5e59e62a9 439 Pfam PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain 33 388 5.6E-19 T 14-10-2018 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal GO:0003824 GYO_2571 97b9c3515ca26d2d3f0051e5e59e62a9 439 SUPERFAMILY SSF51419 30 299 3.05E-82 T 14-10-2018 IPR029066 PLP-binding barrel GYO_2571 97b9c3515ca26d2d3f0051e5e59e62a9 439 Hamap MF_02120 Diaminopimelate decarboxylase [lysA]. 19 431 42.572 T 14-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 GYO_2539 e1b6fdf83cda42c8f3097a1ff9bf01e2 525 SUPERFAMILY SSF55021 440 522 3.28E-19 T 14-10-2018 GYO_2539 e1b6fdf83cda42c8f3097a1ff9bf01e2 525 Gene3D G3DSA:3.40.50.720 91 280 2.4E-115 T 14-10-2018 GYO_2539 e1b6fdf83cda42c8f3097a1ff9bf01e2 525 TIGRFAM TIGR01327 PGDH: phosphoglycerate dehydrogenase 3 524 1.4E-228 T 14-10-2018 IPR006236 D-3-phosphoglycerate dehydrogenase GO:0004617|GO:0006564 KEGG: 00260+1.1.1.95|KEGG: 00680+1.1.1.95|Reactome: R-HSA-977347 GYO_2539 e1b6fdf83cda42c8f3097a1ff9bf01e2 525 Gene3D G3DSA:3.30.1330.90 318 450 4.3E-35 T 14-10-2018 IPR029009 Allosteric substrate binding domain superfamily Reactome: R-HSA-977347 GYO_2539 e1b6fdf83cda42c8f3097a1ff9bf01e2 525 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 104 278 5.7E-63 T 14-10-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 GYO_2539 e1b6fdf83cda42c8f3097a1ff9bf01e2 525 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 4 310 5.2E-34 T 14-10-2018 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0016616|GO:0051287|GO:0055114 GYO_2539 e1b6fdf83cda42c8f3097a1ff9bf01e2 525 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 218 234 - T 14-10-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site GYO_2539 e1b6fdf83cda42c8f3097a1ff9bf01e2 525 Pfam PF01842 ACT domain 452 514 9.7E-10 T 14-10-2018 IPR002912 ACT domain GYO_2539 e1b6fdf83cda42c8f3097a1ff9bf01e2 525 Gene3D G3DSA:3.40.50.720 4 289 2.4E-115 T 14-10-2018 GYO_2539 e1b6fdf83cda42c8f3097a1ff9bf01e2 525 SUPERFAMILY SSF52283 14 126 8.51E-33 T 14-10-2018 GYO_2539 e1b6fdf83cda42c8f3097a1ff9bf01e2 525 ProSitePatterns PS00670 D-isomer specific 2-hydroxyacid dehydrogenases signature 2. 189 211 - T 14-10-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site GYO_2539 e1b6fdf83cda42c8f3097a1ff9bf01e2 525 SUPERFAMILY SSF51735 95 279 1.08E-61 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily GYO_2539 e1b6fdf83cda42c8f3097a1ff9bf01e2 525 Gene3D G3DSA:3.30.70.260 451 525 1.1E-20 T 14-10-2018 GYO_2539 e1b6fdf83cda42c8f3097a1ff9bf01e2 525 SUPERFAMILY SSF143548 316 446 1.6E-34 T 14-10-2018 IPR029009 Allosteric substrate binding domain superfamily Reactome: R-HSA-977347 GYO_2539 e1b6fdf83cda42c8f3097a1ff9bf01e2 525 ProSitePatterns PS00065 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 141 168 - T 14-10-2018 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 GYO_1525 0fc995ae49c0119c9ea0e20837ecbbb4 195 Pfam PF11611 Domain of unknown function (DUF4352) 56 180 9.1E-28 T 14-10-2018 IPR029051 Domain of unknown function DUF4352 GYO_1525 0fc995ae49c0119c9ea0e20837ecbbb4 195 Gene3D G3DSA:2.60.40.1240 55 195 2.8E-33 T 14-10-2018 IPR029050 Immunoprotective extracellular, immunoglobulin-like domain superfamily GYO_1128 29b9a6d406effdba73cb16052301bebc 329 Pfam PF00535 Glycosyl transferase family 2 7 167 1.7E-33 T 14-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 GYO_1128 29b9a6d406effdba73cb16052301bebc 329 SUPERFAMILY SSF53448 5 253 2.01E-36 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases GYO_1128 29b9a6d406effdba73cb16052301bebc 329 Gene3D G3DSA:3.90.550.10 2 194 3.2E-32 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases GYO_3248 9cf3cf3606f5c7abc13224e253ef8495 382 Pfam PF05975 Bacterial ABC transporter protein EcsB 5 378 1.1E-32 T 14-10-2018 IPR010288 Bacterial ABC transporter EcsB GO:0016021 GYO_3248 9cf3cf3606f5c7abc13224e253ef8495 382 PIRSF PIRSF037259 1 382 3.1E-84 T 14-10-2018 IPR010288 Bacterial ABC transporter EcsB GO:0016021 GYO_1828 56eaaa863a39ffce7fb750e6afbaf81b 1148 Gene3D G3DSA:3.10.600.10 464 505 2.1E-7 T 14-10-2018 GYO_1828 56eaaa863a39ffce7fb750e6afbaf81b 1148 Pfam PF00364 Biotin-requiring enzyme 1079 1145 3.4E-17 T 14-10-2018 IPR000089 Biotin/lipoyl attachment GYO_1828 56eaaa863a39ffce7fb750e6afbaf81b 1148 SUPERFAMILY SSF51230 1070 1146 4.58E-21 T 14-10-2018 IPR011053 Single hybrid motif GYO_1828 56eaaa863a39ffce7fb750e6afbaf81b 1148 SUPERFAMILY SSF89000 834 1010 1.57E-60 T 14-10-2018 GYO_1828 56eaaa863a39ffce7fb750e6afbaf81b 1148 Pfam PF02436 Conserved carboxylase domain 829 1029 1.1E-79 T 14-10-2018 IPR003379 Carboxylase, conserved domain Reactome: R-HSA-196780|Reactome: R-HSA-3371599|Reactome: R-HSA-70263 GYO_1828 56eaaa863a39ffce7fb750e6afbaf81b 1148 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 120 326 1.6E-79 T 14-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 GYO_1828 56eaaa863a39ffce7fb750e6afbaf81b 1148 Gene3D G3DSA:2.40.50.100 1069 1148 6.5E-25 T 14-10-2018 GYO_1828 56eaaa863a39ffce7fb750e6afbaf81b 1148 SUPERFAMILY SSF51246 342 460 2.67E-37 T 14-10-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 GYO_1828 56eaaa863a39ffce7fb750e6afbaf81b 1148 Pfam PF02785 Biotin carboxylase C-terminal domain 346 453 1.6E-32 T 14-10-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 GYO_1828 56eaaa863a39ffce7fb750e6afbaf81b 1148 Gene3D G3DSA:3.10.600.10 510 1061 3.6E-291 T 14-10-2018 GYO_1828 56eaaa863a39ffce7fb750e6afbaf81b 1148 SUPERFAMILY SSF51569 526 837 1.47E-80 T 14-10-2018 GYO_1828 56eaaa863a39ffce7fb750e6afbaf81b 1148 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 290 297 - T 14-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 GYO_1828 56eaaa863a39ffce7fb750e6afbaf81b 1148 Gene3D G3DSA:1.10.10.2790 944 979 3.6E-291 T 14-10-2018 GYO_1828 56eaaa863a39ffce7fb750e6afbaf81b 1148 SUPERFAMILY SSF52440 5 117 4.89E-45 T 14-10-2018 IPR016185 Pre-ATP-grasp domain superfamily GYO_1828 56eaaa863a39ffce7fb750e6afbaf81b 1148 TIGRFAM TIGR01235 pyruv_carbox: pyruvate carboxylase 8 1146 0.0 T 14-10-2018 IPR005930 Pyruvate carboxylase GO:0004736|GO:0005524|GO:0006090|GO:0006094|GO:0009374 KEGG: 00020+6.4.1.1|KEGG: 00620+6.4.1.1|KEGG: 00720+6.4.1.1|MetaCyc: PWY-5750|MetaCyc: PWY-6142|MetaCyc: PWY-6146|Reactome: R-HSA-196780|Reactome: R-HSA-3371599|Reactome: R-HSA-70263 GYO_1828 56eaaa863a39ffce7fb750e6afbaf81b 1148 Pfam PF00682 HMGL-like 534 806 5.2E-26 T 14-10-2018 IPR000891 Pyruvate carboxyltransferase GO:0003824 GYO_1828 56eaaa863a39ffce7fb750e6afbaf81b 1148 PIRSF PIRSF001594 1 1147 0.0 T 14-10-2018 IPR005930 Pyruvate carboxylase GO:0004736|GO:0005524|GO:0006090|GO:0006094|GO:0009374 KEGG: 00020+6.4.1.1|KEGG: 00620+6.4.1.1|KEGG: 00720+6.4.1.1|MetaCyc: PWY-5750|MetaCyc: PWY-6142|MetaCyc: PWY-6146|Reactome: R-HSA-196780|Reactome: R-HSA-3371599|Reactome: R-HSA-70263 GYO_1828 56eaaa863a39ffce7fb750e6afbaf81b 1148 SUPERFAMILY SSF56059 88 330 5.13E-70 T 14-10-2018 GYO_1828 56eaaa863a39ffce7fb750e6afbaf81b 1148 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 158 172 - T 14-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 GYO_1828 56eaaa863a39ffce7fb750e6afbaf81b 1148 SMART SM00878 346 453 6.2E-51 T 14-10-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 GYO_1828 56eaaa863a39ffce7fb750e6afbaf81b 1148 Gene3D G3DSA:3.30.470.130 1 461 1.1E-198 T 14-10-2018 GYO_1828 56eaaa863a39ffce7fb750e6afbaf81b 1148 Pfam PF00289 Biotin carboxylase, N-terminal domain 6 115 2.1E-43 T 14-10-2018 IPR005481 Biotin carboxylase-like, N-terminal domain Reactome: R-HSA-196780|Reactome: R-HSA-3371599 GYO_1828 56eaaa863a39ffce7fb750e6afbaf81b 1148 Gene3D G3DSA:1.10.472.90 819 943 3.6E-291 T 14-10-2018 GYO_1828 56eaaa863a39ffce7fb750e6afbaf81b 1148 Gene3D G3DSA:3.20.20.70 514 818 3.6E-291 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 GYO_1283 c8fbce52c9e7b8597dd2963c7ad41642 408 Gene3D G3DSA:3.60.21.10 3 252 2.4E-58 T 14-10-2018 IPR029052 Metallo-dependent phosphatase-like GYO_1283 c8fbce52c9e7b8597dd2963c7ad41642 408 PIRSF PIRSF033091 3 408 2.7E-155 T 14-10-2018 IPR014576 Predicted phosphoesterase, YhaO type GYO_1283 c8fbce52c9e7b8597dd2963c7ad41642 408 Pfam PF00149 Calcineurin-like phosphoesterase 5 203 1.4E-14 T 14-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 GYO_1283 c8fbce52c9e7b8597dd2963c7ad41642 408 SUPERFAMILY SSF56300 6 297 8.05E-57 T 14-10-2018 GYO_1260 e1ec20fb6952d2921d5f47b903981f8d 166 Pfam PF00582 Universal stress protein family 4 166 7.5E-40 T 14-10-2018 IPR006016 UspA GYO_1260 e1ec20fb6952d2921d5f47b903981f8d 166 Gene3D G3DSA:3.40.50.620 3 166 1.7E-33 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold GYO_1260 e1ec20fb6952d2921d5f47b903981f8d 166 PRINTS PR01438 Universal stress protein signature 4 22 8.9E-15 T 14-10-2018 IPR006015 Universal stress protein A GYO_1260 e1ec20fb6952d2921d5f47b903981f8d 166 PRINTS PR01438 Universal stress protein signature 126 138 8.9E-15 T 14-10-2018 IPR006015 Universal stress protein A GYO_1260 e1ec20fb6952d2921d5f47b903981f8d 166 PRINTS PR01438 Universal stress protein signature 144 166 8.9E-15 T 14-10-2018 IPR006015 Universal stress protein A GYO_1260 e1ec20fb6952d2921d5f47b903981f8d 166 SUPERFAMILY SSF52402 5 166 2.51E-30 T 14-10-2018 GYO_4222 ca5f737bf5e8a25c62772784fbd98a72 481 Pfam PF03239 Iron permease FTR1 family 9 395 2.3E-88 T 14-10-2018 IPR004923 Iron permease FTR1/Fip1/EfeU GO:0005381|GO:0016020|GO:0033573|GO:0034755 GYO_3156 6750dd716e939c717e37efa9b86c0169 204 Gene3D G3DSA:3.40.50.300 1 202 1.2E-80 T 14-10-2018 GYO_3156 6750dd716e939c717e37efa9b86c0169 204 TIGRFAM TIGR00152 TIGR00152: dephospho-CoA kinase 4 191 5.3E-75 T 14-10-2018 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|MetaCyc: PWY-7851 GYO_3156 6750dd716e939c717e37efa9b86c0169 204 Pfam PF01121 Dephospho-CoA kinase 3 183 1.0E-64 T 14-10-2018 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|MetaCyc: PWY-7851 GYO_3156 6750dd716e939c717e37efa9b86c0169 204 Hamap MF_00376 Dephospho-CoA kinase [coaE]. 2 199 30.375 T 14-10-2018 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|MetaCyc: PWY-7851 GYO_3156 6750dd716e939c717e37efa9b86c0169 204 SUPERFAMILY SSF52540 4 193 4.5E-50 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase GYO_3524 53426dbc11d95b76dc5058e930cc9ded 91 PIRSF PIRSF012565 1 91 2.5E-50 T 14-10-2018 IPR009370 Protein of unknown function DUF1027 GYO_3524 53426dbc11d95b76dc5058e930cc9ded 91 Pfam PF06265 Protein of unknown function (DUF1027) 4 87 1.9E-39 T 14-10-2018 IPR009370 Protein of unknown function DUF1027 GYO_3524 53426dbc11d95b76dc5058e930cc9ded 91 Gene3D G3DSA:3.50.4.20 1 91 1.5E-44 T 14-10-2018 IPR038141 YutD-like superfamily GYO_3398 fcecc85e97c66f9598c37705209dff45 276 Hamap MF_01006 Undecaprenyl-diphosphatase [uppP]. 4 275 18.241 T 14-10-2018 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 GYO_3398 fcecc85e97c66f9598c37705209dff45 276 TIGRFAM TIGR00753 undec_PP_bacA: undecaprenyl-diphosphatase UppP 9 268 2.9E-108 T 14-10-2018 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 GYO_3398 fcecc85e97c66f9598c37705209dff45 276 Pfam PF02673 Bacitracin resistance protein BacA 9 270 2.2E-84 T 14-10-2018 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 GYO_0148 644288f9826179f386e313e6764e04f6 218 SMART SM00322 59 124 9.9E-9 T 14-10-2018 IPR004087 K Homology domain GO:0003676 GYO_0148 644288f9826179f386e313e6764e04f6 218 Gene3D G3DSA:3.30.1140.32 107 207 2.6E-40 T 14-10-2018 IPR036419 Ribosomal protein S3, C-terminal domain superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 GYO_0148 644288f9826179f386e313e6764e04f6 218 Pfam PF07650 KH domain 37 109 2.0E-21 T 14-10-2018 IPR004044 K Homology domain, type 2 GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 GYO_0148 644288f9826179f386e313e6764e04f6 218 Pfam PF00189 Ribosomal protein S3, C-terminal domain 119 201 6.3E-39 T 14-10-2018 IPR001351 Ribosomal protein S3, C-terminal GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 GYO_0148 644288f9826179f386e313e6764e04f6 218 SUPERFAMILY SSF54814 2 105 2.88E-39 T 14-10-2018 IPR009019 K homology domain superfamily, prokaryotic type GO:0003723 GYO_0148 644288f9826179f386e313e6764e04f6 218 ProSitePatterns PS00548 Ribosomal protein S3 signature. 162 196 - T 14-10-2018 IPR018280 Ribosomal protein S3, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 GYO_0148 644288f9826179f386e313e6764e04f6 218 TIGRFAM TIGR01009 rpsC_bact: ribosomal protein uS3 1 208 4.7E-97 T 14-10-2018 IPR005704 Ribosomal protein S3, bacterial GO:0003735|GO:0006412|GO:0015935 GYO_0148 644288f9826179f386e313e6764e04f6 218 Hamap MF_01309_B 30S ribosomal protein S3 [rpsC]. 1 205 38.295 T 14-10-2018 IPR005704 Ribosomal protein S3, bacterial GO:0003735|GO:0006412|GO:0015935 GYO_0148 644288f9826179f386e313e6764e04f6 218 Gene3D G3DSA:3.30.300.20 17 106 5.7E-33 T 14-10-2018 IPR015946 K homology domain-like, alpha/beta GYO_0148 644288f9826179f386e313e6764e04f6 218 SUPERFAMILY SSF54821 107 205 1.96E-37 T 14-10-2018 IPR036419 Ribosomal protein S3, C-terminal domain superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 GYO_1950 75544db1d389bc17bc6e589937f7eb64 81 Pfam PF13083 KH domain 7 79 4.7E-21 T 14-10-2018 GYO_1950 75544db1d389bc17bc6e589937f7eb64 81 Gene3D G3DSA:3.30.1370.10 24 77 4.3E-5 T 14-10-2018 IPR036612 K Homology domain, type 1 superfamily GO:0003723 GYO_1950 75544db1d389bc17bc6e589937f7eb64 81 Hamap MF_00088 UPF0109 protein . 6 80 22.101 T 14-10-2018 IPR020627 Uncharacterised protein family UPF0109 GYO_1950 75544db1d389bc17bc6e589937f7eb64 81 SUPERFAMILY SSF54814 20 63 1.7E-6 T 14-10-2018 IPR009019 K homology domain superfamily, prokaryotic type GO:0003723 GYO_1909 fe4c3ce96cafd4a67c4a8ee8241cdef3 197 Hamap MF_00065 Adenylyl-sulfate kinase [cysC]. 24 196 40.199 T 14-10-2018 IPR002891 Adenylyl-sulfate kinase GO:0000103|GO:0004020|GO:0005524 KEGG: 00230+2.7.1.25|KEGG: 00920+2.7.1.25|MetaCyc: PWY-5340|Reactome: R-HSA-174362|Reactome: R-HSA-2408550 GYO_1909 fe4c3ce96cafd4a67c4a8ee8241cdef3 197 Gene3D G3DSA:3.40.50.300 3 196 1.8E-80 T 14-10-2018 GYO_1909 fe4c3ce96cafd4a67c4a8ee8241cdef3 197 SUPERFAMILY SSF52540 22 194 2.66E-41 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase GYO_1909 fe4c3ce96cafd4a67c4a8ee8241cdef3 197 TIGRFAM TIGR00455 apsK: adenylyl-sulfate kinase 8 192 5.6E-96 T 14-10-2018 IPR002891 Adenylyl-sulfate kinase GO:0000103|GO:0004020|GO:0005524 KEGG: 00230+2.7.1.25|KEGG: 00920+2.7.1.25|MetaCyc: PWY-5340|Reactome: R-HSA-174362|Reactome: R-HSA-2408550 GYO_1909 fe4c3ce96cafd4a67c4a8ee8241cdef3 197 Pfam PF01583 Adenylylsulphate kinase 26 180 2.2E-75 T 14-10-2018 GYO_2885 addba4520c2dc2a5ede86a860d289a1f 468 Pfam PF00232 Glycosyl hydrolase family 1 3 464 1.5E-135 T 14-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 GYO_2885 addba4520c2dc2a5ede86a860d289a1f 468 Gene3D G3DSA:3.20.20.80 1 467 5.6E-157 T 14-10-2018 GYO_2885 addba4520c2dc2a5ede86a860d289a1f 468 ProSitePatterns PS00653 Glycosyl hydrolases family 1 N-terminal signature. 9 23 - T 14-10-2018 IPR033132 Glycosyl hydrolases family 1, N-terminal conserved site GYO_2885 addba4520c2dc2a5ede86a860d289a1f 468 PRINTS PR00131 Glycosyl hydrolase family 1 signature 429 441 3.2E-15 T 14-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 GYO_2885 addba4520c2dc2a5ede86a860d289a1f 468 PRINTS PR00131 Glycosyl hydrolase family 1 signature 295 309 3.2E-15 T 14-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 GYO_2885 addba4520c2dc2a5ede86a860d289a1f 468 PRINTS PR00131 Glycosyl hydrolase family 1 signature 382 393 3.2E-15 T 14-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 GYO_2885 addba4520c2dc2a5ede86a860d289a1f 468 PRINTS PR00131 Glycosyl hydrolase family 1 signature 361 369 3.2E-15 T 14-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 GYO_2885 addba4520c2dc2a5ede86a860d289a1f 468 PRINTS PR00131 Glycosyl hydrolase family 1 signature 404 421 3.2E-15 T 14-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 GYO_2885 addba4520c2dc2a5ede86a860d289a1f 468 SUPERFAMILY SSF51445 4 465 1.44E-154 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily GYO_0074 765461f0f316e92a10004fb5a9d6fb68 128 Gene3D G3DSA:2.40.50.140 1 84 7.8E-30 T 14-10-2018 GYO_0074 765461f0f316e92a10004fb5a9d6fb68 128 SMART SM00316 4 74 2.1E-26 T 14-10-2018 IPR022967 RNA-binding domain, S1 GYO_0074 765461f0f316e92a10004fb5a9d6fb68 128 Pfam PF00575 S1 RNA binding domain 4 74 6.4E-22 T 14-10-2018 IPR003029 S1 domain GO:0003676 GYO_0074 765461f0f316e92a10004fb5a9d6fb68 128 SUPERFAMILY SSF50249 4 84 2.54E-25 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold GYO_3532 f753a145a547e2463c5904694f145a98 282 SUPERFAMILY SSF117396 2 269 6.41E-86 T 14-10-2018 IPR036520 UPF0759 superfamily GYO_3532 f753a145a547e2463c5904694f145a98 282 Pfam PF01904 Protein of unknown function DUF72 16 265 1.7E-61 T 14-10-2018 IPR002763 Protein of unknown function DUF72 GYO_3532 f753a145a547e2463c5904694f145a98 282 Gene3D G3DSA:3.20.20.410 1 282 7.4E-98 T 14-10-2018 IPR036520 UPF0759 superfamily GYO_4095 41e88e36efa7ac4c3785f5939c73a816 139 Gene3D G3DSA:1.10.10.1250 2 82 5.5E-34 T 14-10-2018 IPR038087 DNA-directed RNA polymerase subunit delta domain superfamily GYO_4095 41e88e36efa7ac4c3785f5939c73a816 139 Pfam PF05066 HB1, ASXL, restriction endonuclease HTH domain 14 81 1.5E-13 T 14-10-2018 IPR007759 HB1/Asxl, restriction endonuclease HTH domain GO:0006351|GO:0006355 GYO_4095 41e88e36efa7ac4c3785f5939c73a816 139 Hamap MF_00357 Probable DNA-directed RNA polymerase subunit delta [rpoE]. 9 137 13.271 T 14-10-2018 IPR029757 DNA-directed RNA polymerase subunit delta GO:0006351|GO:0006355 GYO_4095 41e88e36efa7ac4c3785f5939c73a816 139 TIGRFAM TIGR04567 RNAP_delt_lowGC: DNA-directed RNA polymerase delta subunit 12 93 2.7E-33 T 14-10-2018 IPR029757 DNA-directed RNA polymerase subunit delta GO:0006351|GO:0006355 GYO_4274 f30a9cf7c6317cf6517bd1681691eeac 575 SUPERFAMILY SSF90123 1 490 3.53E-42 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 GYO_4274 f30a9cf7c6317cf6517bd1681691eeac 575 TIGRFAM TIGR02868 CydC: thiol reductant ABC exporter, CydC subunit 5 531 1.0E-183 T 14-10-2018 IPR014223 ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydC GO:0016021|GO:0034775|GO:0042626|GO:0045454 GYO_4274 f30a9cf7c6317cf6517bd1681691eeac 575 Gene3D G3DSA:3.40.50.300 327 572 9.3E-77 T 14-10-2018 GYO_4274 f30a9cf7c6317cf6517bd1681691eeac 575 Pfam PF00005 ABC transporter 353 500 2.0E-29 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 GYO_4274 f30a9cf7c6317cf6517bd1681691eeac 575 SUPERFAMILY SSF52540 330 570 1.17E-71 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase GYO_4274 f30a9cf7c6317cf6517bd1681691eeac 575 ProSitePatterns PS00211 ABC transporters family signature. 473 487 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 GYO_4274 f30a9cf7c6317cf6517bd1681691eeac 575 Pfam PF00664 ABC transporter transmembrane region 18 273 5.2E-14 T 14-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 GYO_4274 f30a9cf7c6317cf6517bd1681691eeac 575 SMART SM00382 362 547 2.8E-15 T 14-10-2018 IPR003593 AAA+ ATPase domain GYO_4274 f30a9cf7c6317cf6517bd1681691eeac 575 Gene3D G3DSA:1.20.1560.10 5 317 5.5E-26 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 GYO_1552 27f25dfeb64ad95634e0fd2281e147ce 376 Gene3D G3DSA:1.25.40.10 1 376 1.7E-124 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 GYO_1552 27f25dfeb64ad95634e0fd2281e147ce 376 Pfam PF13424 Tetratricopeptide repeat 219 291 5.6E-11 T 14-10-2018 GYO_1552 27f25dfeb64ad95634e0fd2281e147ce 376 SMART SM00028 220 253 5.1E-7 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 GYO_1552 27f25dfeb64ad95634e0fd2281e147ce 376 SMART SM00028 259 292 21.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 GYO_1552 27f25dfeb64ad95634e0fd2281e147ce 376 SUPERFAMILY SSF48452 103 305 5.42E-20 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 GYO_3757 156e0795585ea227a0dcd14e7cdba7dd 322 Pfam PF04230 Polysaccharide pyruvyl transferase 37 288 3.1E-26 T 14-10-2018 IPR007345 Polysaccharide pyruvyl transferase GYO_2692 4a5313ca231bb58e67f0afa4a94e09d9 131 Hamap MF_00073 Transcription antitermination protein NusB [nusB]. 1 129 25.326 T 14-10-2018 IPR011605 NusB antitermination factor GO:0006353 GYO_2692 4a5313ca231bb58e67f0afa4a94e09d9 131 SUPERFAMILY SSF48013 2 128 2.49E-42 T 14-10-2018 IPR035926 NusB-like superfamily GYO_2692 4a5313ca231bb58e67f0afa4a94e09d9 131 TIGRFAM TIGR01951 nusB: transcription antitermination factor NusB 2 127 7.3E-46 T 14-10-2018 IPR011605 NusB antitermination factor GO:0006353 GYO_2692 4a5313ca231bb58e67f0afa4a94e09d9 131 Gene3D G3DSA:1.10.940.10 1 125 8.9E-47 T 14-10-2018 IPR035926 NusB-like superfamily GYO_2692 4a5313ca231bb58e67f0afa4a94e09d9 131 Pfam PF01029 NusB family 4 124 3.5E-41 T 14-10-2018 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 GYO_1975 6f37c8a135f53d07a9cbcf24d4c45991 531 Gene3D G3DSA:3.30.300.30 125 218 6.9E-10 T 14-10-2018 GYO_1975 6f37c8a135f53d07a9cbcf24d4c45991 531 Pfam PF08345 Flagellar M-ring protein C-terminal 252 397 8.7E-24 T 14-10-2018 IPR013556 Flagellar M-ring C-terminal GYO_1975 6f37c8a135f53d07a9cbcf24d4c45991 531 TIGRFAM TIGR00206 fliF: flagellar M-ring protein FliF 1 531 1.8E-221 T 14-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 GYO_1975 6f37c8a135f53d07a9cbcf24d4c45991 531 PIRSF PIRSF004862 1 531 1.3E-109 T 14-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 GYO_1975 6f37c8a135f53d07a9cbcf24d4c45991 531 PRINTS PR01009 Flagellar M-ring protein signature 149 163 3.9E-27 T 14-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 GYO_1975 6f37c8a135f53d07a9cbcf24d4c45991 531 PRINTS PR01009 Flagellar M-ring protein signature 117 135 3.9E-27 T 14-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 GYO_1975 6f37c8a135f53d07a9cbcf24d4c45991 531 PRINTS PR01009 Flagellar M-ring protein signature 193 211 3.9E-27 T 14-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 GYO_1975 6f37c8a135f53d07a9cbcf24d4c45991 531 PRINTS PR01009 Flagellar M-ring protein signature 265 283 3.9E-27 T 14-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 GYO_1975 6f37c8a135f53d07a9cbcf24d4c45991 531 PRINTS PR01009 Flagellar M-ring protein signature 344 368 3.9E-27 T 14-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 GYO_1975 6f37c8a135f53d07a9cbcf24d4c45991 531 Pfam PF01514 Secretory protein of YscJ/FliF family 26 216 3.6E-61 T 14-10-2018 IPR006182 Secretory protein YscJ/FliF GYO_3855 8fb6849ab84b18709980ac07093f846f 661 Pfam PF00271 Helicase conserved C-terminal domain 440 544 6.0E-19 T 14-10-2018 IPR001650 Helicase, C-terminal GYO_3855 8fb6849ab84b18709980ac07093f846f 661 Pfam PF04851 Type III restriction enzyme, res subunit 12 130 2.0E-12 T 14-10-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 GYO_3855 8fb6849ab84b18709980ac07093f846f 661 SUPERFAMILY SSF52540 3 414 1.51E-143 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase GYO_3855 8fb6849ab84b18709980ac07093f846f 661 Gene3D G3DSA:4.10.860.10 607 660 2.5E-5 T 14-10-2018 GYO_3855 8fb6849ab84b18709980ac07093f846f 661 Pfam PF12344 Ultra-violet resistance protein B 551 593 9.9E-22 T 14-10-2018 IPR024759 UvrB, YAD/RRR-motif-containing domain GYO_3855 8fb6849ab84b18709980ac07093f846f 661 Gene3D G3DSA:3.40.50.300 414 595 2.2E-53 T 14-10-2018 GYO_3855 8fb6849ab84b18709980ac07093f846f 661 SUPERFAMILY SSF52540 324 589 2.66E-36 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase GYO_3855 8fb6849ab84b18709980ac07093f846f 661 SMART SM00487 9 425 3.9E-27 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain GYO_3855 8fb6849ab84b18709980ac07093f846f 661 Gene3D G3DSA:3.40.50.300 257 413 1.1E-54 T 14-10-2018 GYO_3855 8fb6849ab84b18709980ac07093f846f 661 TIGRFAM TIGR00631 uvrb: excinuclease ABC subunit B 4 658 0.0 T 14-10-2018 IPR004807 UvrABC system, subunit B GO:0003677|GO:0005524|GO:0006289|GO:0009380|GO:0016887 GYO_3855 8fb6849ab84b18709980ac07093f846f 661 SUPERFAMILY SSF46600 615 659 9.94E-11 T 14-10-2018 IPR036876 UVR domain superfamily GYO_3855 8fb6849ab84b18709980ac07093f846f 661 SMART SM00490 459 545 6.8E-21 T 14-10-2018 IPR001650 Helicase, C-terminal GYO_3855 8fb6849ab84b18709980ac07093f846f 661 Pfam PF02151 UvrB/uvrC motif 626 659 4.2E-9 T 14-10-2018 IPR001943 UVR domain GO:0005515 GYO_3855 8fb6849ab84b18709980ac07093f846f 661 Gene3D G3DSA:3.40.50.300 1 241 5.2E-85 T 14-10-2018 GYO_3855 8fb6849ab84b18709980ac07093f846f 661 Hamap MF_00204 UvrABC system protein B [uvrB]. 3 660 45.355 T 14-10-2018 IPR004807 UvrABC system, subunit B GO:0003677|GO:0005524|GO:0006289|GO:0009380|GO:0016887 GYO_0219 ba07269ce14627d70b616ca7f1f1c545 173 SMART SM00470 4 93 6.5E-5 T 14-10-2018 IPR003115 ParB/Sulfiredoxin GYO_0219 ba07269ce14627d70b616ca7f1f1c545 173 Pfam PF02195 ParB-like nuclease domain 6 92 3.1E-7 T 14-10-2018 IPR003115 ParB/Sulfiredoxin GYO_0219 ba07269ce14627d70b616ca7f1f1c545 173 SUPERFAMILY SSF110849 3 93 3.31E-13 T 14-10-2018 IPR036086 ParB/Sulfiredoxin superfamily GYO_0298 ba07269ce14627d70b616ca7f1f1c545 173 SMART SM00470 4 93 6.5E-5 T 14-10-2018 IPR003115 ParB/Sulfiredoxin GYO_0298 ba07269ce14627d70b616ca7f1f1c545 173 Pfam PF02195 ParB-like nuclease domain 6 92 3.1E-7 T 14-10-2018 IPR003115 ParB/Sulfiredoxin GYO_0298 ba07269ce14627d70b616ca7f1f1c545 173 SUPERFAMILY SSF110849 3 93 3.31E-13 T 14-10-2018 IPR036086 ParB/Sulfiredoxin superfamily GYO_2507 b6acc7c928a58dea98a1223257dc0366 92 PRINTS PR01727 Prokaryotic integration host factor signature 74 88 2.2E-22 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 GYO_2507 b6acc7c928a58dea98a1223257dc0366 92 PRINTS PR01727 Prokaryotic integration host factor signature 40 55 2.2E-22 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 GYO_2507 b6acc7c928a58dea98a1223257dc0366 92 PRINTS PR01727 Prokaryotic integration host factor signature 58 71 2.2E-22 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 GYO_2507 b6acc7c928a58dea98a1223257dc0366 92 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 46 65 - T 14-10-2018 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 GYO_2507 b6acc7c928a58dea98a1223257dc0366 92 Gene3D G3DSA:4.10.520.10 1 92 2.1E-41 T 14-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 GYO_2507 b6acc7c928a58dea98a1223257dc0366 92 SMART SM00411 1 90 7.2E-54 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 GYO_2507 b6acc7c928a58dea98a1223257dc0366 92 Pfam PF00216 Bacterial DNA-binding protein 1 89 1.3E-38 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 GYO_2507 b6acc7c928a58dea98a1223257dc0366 92 SUPERFAMILY SSF47729 1 90 1.62E-36 T 14-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 GYO_4401 acf02fa21fd8af202305000ef5881ed6 143 Gene3D G3DSA:1.10.10.10 2 141 3.9E-25 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily GYO_4401 acf02fa21fd8af202305000ef5881ed6 143 SUPERFAMILY SSF46785 16 141 6.36E-24 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily GYO_4401 acf02fa21fd8af202305000ef5881ed6 143 ProSitePatterns PS01117 MarR-type HTH domain signature. 66 100 - T 14-10-2018 IPR023187 Transcriptional regulator MarR-type, conserved site GYO_4401 acf02fa21fd8af202305000ef5881ed6 143 PRINTS PR00598 Bacterial regulatory protein MarR family signature 87 103 6.8E-10 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 GYO_4401 acf02fa21fd8af202305000ef5881ed6 143 PRINTS PR00598 Bacterial regulatory protein MarR family signature 51 67 6.8E-10 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 GYO_4401 acf02fa21fd8af202305000ef5881ed6 143 PRINTS PR00598 Bacterial regulatory protein MarR family signature 68 83 6.8E-10 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 GYO_4401 acf02fa21fd8af202305000ef5881ed6 143 PRINTS PR00598 Bacterial regulatory protein MarR family signature 117 137 6.8E-10 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 GYO_4401 acf02fa21fd8af202305000ef5881ed6 143 SMART SM00347 27 127 1.4E-24 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 GYO_4401 acf02fa21fd8af202305000ef5881ed6 143 Pfam PF01047 MarR family 35 91 5.4E-15 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 GYO_1124 28caf071036a53a729662bd747e85f41 89 Pfam PF14043 WVELL protein 4 74 1.2E-36 T 14-10-2018 IPR026952 WVELL protein GYO_0936 b347b96289cf6ec02729d298e52118fe 460 Gene3D G3DSA:3.40.50.150 85 452 5.7E-129 T 14-10-2018 GYO_0936 b347b96289cf6ec02729d298e52118fe 460 Pfam PF05958 tRNA (Uracil-5-)-methyltransferase 281 458 1.3E-21 T 14-10-2018 IPR010280 (Uracil-5)-methyltransferase family GO:0006396|GO:0008173 GYO_0936 b347b96289cf6ec02729d298e52118fe 460 SUPERFAMILY SSF50249 2 64 2.06E-17 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold GYO_0936 b347b96289cf6ec02729d298e52118fe 460 ProSitePatterns PS01231 RNA methyltransferase trmA family signature 2. 440 450 - T 14-10-2018 IPR030391 RNA methyltransferase TrmA, conserved site GYO_0936 b347b96289cf6ec02729d298e52118fe 460 SUPERFAMILY SSF53335 72 457 3.97E-95 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase GYO_0936 b347b96289cf6ec02729d298e52118fe 460 Pfam PF01938 TRAM domain 8 63 9.2E-13 T 14-10-2018 IPR002792 TRAM domain GYO_0936 b347b96289cf6ec02729d298e52118fe 460 ProSitePatterns PS01230 RNA methyltransferase trmA family signature 1. 388 419 - T 14-10-2018 IPR030390 RNA methyltransferase TrmA, active site GYO_0936 b347b96289cf6ec02729d298e52118fe 460 TIGRFAM TIGR00479 rumA: 23S rRNA (uracil-5-)-methyltransferase RumA 20 450 4.0E-214 T 14-10-2018 GYO_0936 b347b96289cf6ec02729d298e52118fe 460 Gene3D G3DSA:2.40.50.140 1 83 3.1E-23 T 14-10-2018 GYO_0936 b347b96289cf6ec02729d298e52118fe 460 Gene3D G3DSA:3.40.1350.30 134 289 5.7E-129 T 14-10-2018 GYO_0045 c1738b7798ff4ce215d4b2631398a489 292 Hamap MF_01877 Ribosomal RNA small subunit methyltransferase I [rsmI]. 16 234 36.31 T 14-10-2018 IPR008189 rRNA small subunit methyltransferase I GO:0008168 GYO_0045 c1738b7798ff4ce215d4b2631398a489 292 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 17 215 5.6E-27 T 14-10-2018 IPR000878 Tetrapyrrole methylase GO:0008168 Reactome: R-HSA-5358493 GYO_0045 c1738b7798ff4ce215d4b2631398a489 292 PIRSF PIRSF005917 4 292 4.7E-102 T 14-10-2018 IPR008189 rRNA small subunit methyltransferase I GO:0008168 GYO_0045 c1738b7798ff4ce215d4b2631398a489 292 Gene3D G3DSA:3.30.950.10 124 239 4.3E-42 T 14-10-2018 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008168 Reactome: R-HSA-5358493 GYO_0045 c1738b7798ff4ce215d4b2631398a489 292 TIGRFAM TIGR00096 TIGR00096: 16S rRNA (cytidine(1402)-2'-O)-methyltransferase 16 289 8.3E-82 T 14-10-2018 IPR008189 rRNA small subunit methyltransferase I GO:0008168 GYO_0045 c1738b7798ff4ce215d4b2631398a489 292 Gene3D G3DSA:3.40.1010.10 3 123 2.1E-44 T 14-10-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008168 Reactome: R-HSA-5358493 GYO_0045 c1738b7798ff4ce215d4b2631398a489 292 ProSitePatterns PS01296 RsmI AdoMet-dependent methyltransferase protein family signature. 94 105 - T 14-10-2018 IPR018063 SAM-dependent methyltransferase RsmI, conserved site GO:0008168 GYO_0045 c1738b7798ff4ce215d4b2631398a489 292 SUPERFAMILY SSF53790 14 232 6.67E-80 T 14-10-2018 IPR035996 Tetrapyrrole methylase superfamily GO:0008168 Reactome: R-HSA-5358493 GYO_0446 b11e8265f60e3930bd82bc53882b6caa 488 Gene3D G3DSA:3.40.309.10 259 453 2.3E-170 T 14-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 GYO_0446 b11e8265f60e3930bd82bc53882b6caa 488 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 254 261 - T 14-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 GYO_0446 b11e8265f60e3930bd82bc53882b6caa 488 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 282 293 - T 14-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 GYO_0446 b11e8265f60e3930bd82bc53882b6caa 488 Gene3D G3DSA:3.40.605.10 14 482 2.3E-170 T 14-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 GYO_0446 b11e8265f60e3930bd82bc53882b6caa 488 Pfam PF00171 Aldehyde dehydrogenase family 18 484 2.4E-175 T 14-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 GYO_0446 b11e8265f60e3930bd82bc53882b6caa 488 SUPERFAMILY SSF53720 7 487 2.62E-165 T 14-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 GYO_3884 d55d6473a6f89460d4dd5cf58e2eaa64 298 Pfam PF00669 Bacterial flagellin N-terminal helical region 7 139 1.5E-25 T 14-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 GYO_3884 d55d6473a6f89460d4dd5cf58e2eaa64 298 SUPERFAMILY SSF64518 1 298 6.15E-71 T 14-10-2018 GYO_3884 d55d6473a6f89460d4dd5cf58e2eaa64 298 Gene3D G3DSA:1.20.1330.10 40 244 1.4E-48 T 14-10-2018 GYO_3884 d55d6473a6f89460d4dd5cf58e2eaa64 298 TIGRFAM TIGR02550 flagell_flgL: flagellar hook-associated protein 3 2 154 3.8E-56 T 14-10-2018 IPR013384 Flagellar hook-associated protein 3 GO:0009424|GO:0071973 GYO_3884 d55d6473a6f89460d4dd5cf58e2eaa64 298 Pfam PF00700 Bacterial flagellin C-terminal helical region 215 297 6.6E-8 T 14-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 GYO_3770 c2e533feb5b00396e1f6002d97ce84e2 227 Gene3D G3DSA:3.40.50.300 2 227 6.3E-70 T 14-10-2018 GYO_3770 c2e533feb5b00396e1f6002d97ce84e2 227 Pfam PF13614 AAA domain 51 186 6.0E-11 T 14-10-2018 IPR025669 AAA domain GYO_3770 c2e533feb5b00396e1f6002d97ce84e2 227 TIGRFAM TIGR01007 eps_fam: capsular exopolysaccharide family 26 227 5.1E-66 T 14-10-2018 IPR005702 Exopolysaccharide synthesis protein GO:0045226 GYO_3770 c2e533feb5b00396e1f6002d97ce84e2 227 SUPERFAMILY SSF52540 45 222 5.14E-37 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase GYO_0514 b767a5417d39c320872cc822ded426b8 253 Pfam PF08892 YqcI/YcgG family 33 243 2.6E-80 T 14-10-2018 IPR014988 Uncharacterised protein family, YqcI/YcgG GYO_4147 783e04f7eca5a6981ea7dd5091484e62 74 Pfam PF07293 Protein of unknown function (DUF1450) 7 73 2.6E-9 T 14-10-2018 IPR009910 Protein of unknown function DUF1450 GYO_4147 783e04f7eca5a6981ea7dd5091484e62 74 Hamap MF_01863 UPF0741 protein . 1 74 32.894 T 14-10-2018 IPR020880 Protein of unknown function UPF0741 GYO_3716 f5235985a06190d13541f3ad24c5f554 394 Hamap MF_00145 Phosphoglycerate kinase [pgk]. 8 393 43.119 T 14-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 GYO_3716 f5235985a06190d13541f3ad24c5f554 394 ProSitePatterns PS00111 Phosphoglycerate kinase signature. 15 25 - T 14-10-2018 IPR015911 Phosphoglycerate kinase, conserved site GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 GYO_3716 f5235985a06190d13541f3ad24c5f554 394 PIRSF PIRSF000724 1 394 8.9E-160 T 14-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 GYO_3716 f5235985a06190d13541f3ad24c5f554 394 Pfam PF00162 Phosphoglycerate kinase 6 383 2.8E-164 T 14-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 GYO_3716 f5235985a06190d13541f3ad24c5f554 394 Gene3D G3DSA:3.40.50.1260 7 391 1.8E-165 T 14-10-2018 IPR015824 Phosphoglycerate kinase, N-terminal GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 GYO_3716 f5235985a06190d13541f3ad24c5f554 394 PRINTS PR00477 Phosphoglycerate kinase family signature 10 26 4.2E-98 T 14-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 GYO_3716 f5235985a06190d13541f3ad24c5f554 394 PRINTS PR00477 Phosphoglycerate kinase family signature 369 386 4.2E-98 T 14-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 GYO_3716 f5235985a06190d13541f3ad24c5f554 394 PRINTS PR00477 Phosphoglycerate kinase family signature 312 337 4.2E-98 T 14-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 GYO_3716 f5235985a06190d13541f3ad24c5f554 394 PRINTS PR00477 Phosphoglycerate kinase family signature 190 209 4.2E-98 T 14-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 GYO_3716 f5235985a06190d13541f3ad24c5f554 394 PRINTS PR00477 Phosphoglycerate kinase family signature 31 53 4.2E-98 T 14-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 GYO_3716 f5235985a06190d13541f3ad24c5f554 394 PRINTS PR00477 Phosphoglycerate kinase family signature 346 357 4.2E-98 T 14-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 GYO_3716 f5235985a06190d13541f3ad24c5f554 394 PRINTS PR00477 Phosphoglycerate kinase family signature 167 189 4.2E-98 T 14-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 GYO_3716 f5235985a06190d13541f3ad24c5f554 394 PRINTS PR00477 Phosphoglycerate kinase family signature 137 159 4.2E-98 T 14-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 GYO_3716 f5235985a06190d13541f3ad24c5f554 394 PRINTS PR00477 Phosphoglycerate kinase family signature 109 124 4.2E-98 T 14-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 GYO_3716 f5235985a06190d13541f3ad24c5f554 394 SUPERFAMILY SSF53748 1 393 2.0E-164 T 14-10-2018 IPR036043 Phosphoglycerate kinase superfamily GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 GYO_3716 f5235985a06190d13541f3ad24c5f554 394 Gene3D G3DSA:3.40.50.1260 169 383 1.8E-165 T 14-10-2018 IPR015824 Phosphoglycerate kinase, N-terminal GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 GYO_2002 fd9715235d0afebc50f3be63867f402e 254 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 54 67 - T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 GYO_2002 fd9715235d0afebc50f3be63867f402e 254 SUPERFAMILY SSF88659 100 168 1.46E-14 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like GYO_2002 fd9715235d0afebc50f3be63867f402e 254 TIGRFAM TIGR02479 FliA_WhiG: RNA polymerase sigma factor, FliA/WhiG family 27 249 7.2E-88 T 14-10-2018 IPR012845 RNA polymerase sigma factor, FliA/WhiG GO:0003677|GO:0003899|GO:0006352|GO:0006355|GO:0016987 GYO_2002 fd9715235d0afebc50f3be63867f402e 254 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 219 245 - T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 GYO_2002 fd9715235d0afebc50f3be63867f402e 254 Gene3D G3DSA:1.10.1740.10 14 96 1.6E-27 T 14-10-2018 GYO_2002 fd9715235d0afebc50f3be63867f402e 254 Pfam PF04539 Sigma-70 region 3 106 184 1.3E-10 T 14-10-2018 IPR007624 RNA polymerase sigma-70 region 3 GO:0003700|GO:0006352|GO:0006355 GYO_2002 fd9715235d0afebc50f3be63867f402e 254 Gene3D G3DSA:1.20.140.160 98 252 4.1E-44 T 14-10-2018 GYO_2002 fd9715235d0afebc50f3be63867f402e 254 SUPERFAMILY SSF88659 163 251 8.22E-21 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like GYO_2002 fd9715235d0afebc50f3be63867f402e 254 Pfam PF04542 Sigma-70 region 2 27 99 9.0E-15 T 14-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 GYO_2002 fd9715235d0afebc50f3be63867f402e 254 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 25 248 7.3E-32 T 14-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 GYO_2002 fd9715235d0afebc50f3be63867f402e 254 SUPERFAMILY SSF88946 6 99 1.35E-24 T 14-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 GYO_2002 fd9715235d0afebc50f3be63867f402e 254 Pfam PF04545 Sigma-70, region 4 199 246 3.3E-15 T 14-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 GYO_2002 fd9715235d0afebc50f3be63867f402e 254 PRINTS PR00046 Major sigma-70 factor signature 219 234 7.8E-13 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 GYO_2002 fd9715235d0afebc50f3be63867f402e 254 PRINTS PR00046 Major sigma-70 factor signature 54 67 7.8E-13 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 GYO_2002 fd9715235d0afebc50f3be63867f402e 254 PRINTS PR00046 Major sigma-70 factor signature 234 245 7.8E-13 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 GYO_2002 fd9715235d0afebc50f3be63867f402e 254 PRINTS PR00046 Major sigma-70 factor signature 202 214 7.8E-13 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 GYO_2002 fd9715235d0afebc50f3be63867f402e 254 PRINTS PR00046 Major sigma-70 factor signature 78 86 7.8E-13 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 GYO_2002 fd9715235d0afebc50f3be63867f402e 254 PIRSF PIRSF000770 9 254 1.2E-40 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 GYO_3242 027e125dff4f0cbafdb9dffc728da15e 309 Pfam PF00781 Diacylglycerol kinase catalytic domain 3 129 6.3E-28 T 14-10-2018 IPR001206 Diacylglycerol kinase, catalytic domain GO:0016301 GYO_3242 027e125dff4f0cbafdb9dffc728da15e 309 Gene3D G3DSA:3.40.50.10330 6 127 1.6E-63 T 14-10-2018 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, N-terminal GO:0003951 GYO_3242 027e125dff4f0cbafdb9dffc728da15e 309 Gene3D G3DSA:2.60.200.40 128 295 1.6E-63 T 14-10-2018 GYO_3242 027e125dff4f0cbafdb9dffc728da15e 309 SMART SM00046 3 130 0.0014 T 14-10-2018 IPR001206 Diacylglycerol kinase, catalytic domain GO:0016301 GYO_3242 027e125dff4f0cbafdb9dffc728da15e 309 SUPERFAMILY SSF111331 1 307 8.5E-60 T 14-10-2018 IPR016064 NAD kinase/diacylglycerol kinase-like domain superfamily GYO_3242 027e125dff4f0cbafdb9dffc728da15e 309 TIGRFAM TIGR00147 TIGR00147: lipid kinase, YegS/Rv2252/BmrU family 1 309 1.2E-131 T 14-10-2018 IPR005218 Diacylglycerol/lipid kinase GYO_4161 308c513575f7a75fd7c6545fd9e60c05 412 Pfam PF07690 Major Facilitator Superfamily 25 337 5.1E-55 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 GYO_4161 308c513575f7a75fd7c6545fd9e60c05 412 SUPERFAMILY SSF103473 7 398 2.22E-76 T 14-10-2018 IPR036259 MFS transporter superfamily GYO_4161 308c513575f7a75fd7c6545fd9e60c05 412 Gene3D G3DSA:1.20.1250.20 215 407 5.3E-28 T 14-10-2018 GYO_4161 308c513575f7a75fd7c6545fd9e60c05 412 Gene3D G3DSA:1.20.1250.20 16 214 2.2E-37 T 14-10-2018 GYO_1069 d0717f1791e3f3e6838347e20f6288b2 327 PIRSF PIRSF006621 1 323 2.2E-83 T 14-10-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 GYO_1069 d0717f1791e3f3e6838347e20f6288b2 327 SUPERFAMILY SSF51395 13 317 1.43E-60 T 14-10-2018 GYO_1069 d0717f1791e3f3e6838347e20f6288b2 327 Gene3D G3DSA:3.20.20.70 13 248 4.9E-61 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 GYO_1069 d0717f1791e3f3e6838347e20f6288b2 327 Pfam PF01207 Dihydrouridine synthase (Dus) 15 317 4.1E-48 T 14-10-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 GYO_1069 d0717f1791e3f3e6838347e20f6288b2 327 ProSitePatterns PS01136 Uncharacterized protein family UPF0034 signature. 99 117 - T 14-10-2018 IPR018517 tRNA-dihydrouridine synthase, conserved site GO:0008033|GO:0017150|GO:0050660|GO:0055114 GYO_2706 c035694b04595da57777a2c70e26cc9c 353 Pfam PF01321 Creatinase/Prolidase N-terminal domain 3 127 3.0E-30 T 14-10-2018 IPR000587 Creatinase, N-terminal GO:0016787 GYO_2706 c035694b04595da57777a2c70e26cc9c 353 SUPERFAMILY SSF53092 2 126 1.46E-30 T 14-10-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal GYO_2706 c035694b04595da57777a2c70e26cc9c 353 ProSitePatterns PS00491 Aminopeptidase P and proline dipeptidase signature. 283 295 - T 14-10-2018 IPR001131 Peptidase M24B, X-Pro dipeptidase/aminopeptidase P, conserved site GYO_2706 c035694b04595da57777a2c70e26cc9c 353 Gene3D G3DSA:3.90.230.10 128 353 1.2E-86 T 14-10-2018 GYO_2706 c035694b04595da57777a2c70e26cc9c 353 Pfam PF00557 Metallopeptidase family M24 136 337 1.9E-66 T 14-10-2018 IPR000994 Peptidase M24 GYO_2706 c035694b04595da57777a2c70e26cc9c 353 SUPERFAMILY SSF55920 84 348 5.36E-81 T 14-10-2018 IPR036005 Creatinase/aminopeptidase-like GYO_2706 c035694b04595da57777a2c70e26cc9c 353 Gene3D G3DSA:3.40.350.10 1 127 1.9E-37 T 14-10-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal GYO_2706 c035694b04595da57777a2c70e26cc9c 353 PRINTS PR00599 Methionine aminopeptidase-1 signature 207 223 6.6E-8 T 14-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 GYO_2706 c035694b04595da57777a2c70e26cc9c 353 PRINTS PR00599 Methionine aminopeptidase-1 signature 274 286 6.6E-8 T 14-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 GYO_2706 c035694b04595da57777a2c70e26cc9c 353 PRINTS PR00599 Methionine aminopeptidase-1 signature 305 317 6.6E-8 T 14-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 GYO_4470 a7e4762c7968d83e7d9cce999f27580d 309 Pfam PF09991 Predicted membrane protein (DUF2232) 16 300 7.8E-82 T 14-10-2018 IPR018710 Protein of unknown function DUF2232 GYO_3932 dfeadefe7dc3eeb6f2462225b5559dd3 383 SUPERFAMILY SSF53756 60 377 9.42E-28 T 14-10-2018 GYO_3932 dfeadefe7dc3eeb6f2462225b5559dd3 383 Pfam PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase 35 378 5.4E-74 T 14-10-2018 IPR007554 CDP-glycerol glycerophosphotransferase GO:0016020|GO:0047355 GYO_3932 dfeadefe7dc3eeb6f2462225b5559dd3 383 Gene3D G3DSA:3.40.50.11820 34 373 3.0E-62 T 14-10-2018 GYO_3932 dfeadefe7dc3eeb6f2462225b5559dd3 383 Gene3D G3DSA:3.40.50.12580 197 366 3.0E-62 T 14-10-2018 GYO_2611 277abb7e6f92527f8fa0f1ee2f9fa6a9 411 Gene3D G3DSA:1.10.150.20 182 235 3.3E-13 T 14-10-2018 GYO_2611 277abb7e6f92527f8fa0f1ee2f9fa6a9 411 Pfam PF11799 impB/mucB/samB family C-terminal domain 248 354 3.3E-20 T 14-10-2018 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 GYO_2611 277abb7e6f92527f8fa0f1ee2f9fa6a9 411 SUPERFAMILY SSF100879 248 349 5.3E-19 T 14-10-2018 IPR036775 DNA polymerase, Y-family, little finger domain superfamily GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 GYO_2611 277abb7e6f92527f8fa0f1ee2f9fa6a9 411 Gene3D G3DSA:2.30.40.20 23 76 2.9E-47 T 14-10-2018 GYO_2611 277abb7e6f92527f8fa0f1ee2f9fa6a9 411 SUPERFAMILY SSF56672 4 240 5.07E-72 T 14-10-2018 GYO_2611 277abb7e6f92527f8fa0f1ee2f9fa6a9 411 Hamap MF_01113 DNA polymerase IV [dinB]. 3 361 34.059 T 14-10-2018 IPR022880 DNA polymerase IV GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5655862|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210 GYO_2611 277abb7e6f92527f8fa0f1ee2f9fa6a9 411 Gene3D G3DSA:3.30.1490.100 248 356 4.8E-19 T 14-10-2018 IPR036775 DNA polymerase, Y-family, little finger domain superfamily GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 GYO_2611 277abb7e6f92527f8fa0f1ee2f9fa6a9 411 Gene3D G3DSA:3.30.70.270 6 164 2.9E-47 T 14-10-2018 GYO_2611 277abb7e6f92527f8fa0f1ee2f9fa6a9 411 Pfam PF00817 impB/mucB/samB family 9 157 6.1E-44 T 14-10-2018 IPR001126 UmuC domain GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 GYO_1312 8c9b483423cd645f9152f56ad0c21cb9 775 TIGRFAM TIGR03061 pip_yhgE_Nterm: YhgE/Pip N-terminal domain 7 170 1.3E-60 T 14-10-2018 IPR017500 Phage infection protein, YhgE, N-terminal GYO_1312 8c9b483423cd645f9152f56ad0c21cb9 775 TIGRFAM TIGR03062 pip_yhgE_Cterm: YhgE/Pip C-terminal domain 561 762 6.4E-73 T 14-10-2018 IPR017501 Phage infection protein, YhgE, C-terminal GYO_1312 8c9b483423cd645f9152f56ad0c21cb9 775 SUPERFAMILY SSF58104 411 526 8.89E-5 T 14-10-2018 GYO_1312 8c9b483423cd645f9152f56ad0c21cb9 775 Pfam PF12698 ABC-2 family transporter protein 21 756 1.5E-19 T 14-10-2018 GYO_1312 8c9b483423cd645f9152f56ad0c21cb9 775 SUPERFAMILY SSF57997 195 357 2.16E-5 T 14-10-2018 GYO_0603 df28e37c041049ba80e301e791aad633 95 Pfam PF03992 Antibiotic biosynthesis monooxygenase 1 76 1.6E-20 T 14-10-2018 IPR007138 Antibiotic biosynthesis monooxygenase domain GYO_0603 df28e37c041049ba80e301e791aad633 95 SUPERFAMILY SSF54909 1 87 3.54E-28 T 14-10-2018 IPR011008 Dimeric alpha-beta barrel GYO_0603 df28e37c041049ba80e301e791aad633 95 Gene3D G3DSA:3.30.70.100 1 94 1.8E-28 T 14-10-2018 GYO_1231 74bf8bab595e67ca536ddfed4de15bc3 291 SUPERFAMILY SSF53850 87 288 2.39E-25 T 14-10-2018 GYO_1231 74bf8bab595e67ca536ddfed4de15bc3 291 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 3.2E-6 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 GYO_1231 74bf8bab595e67ca536ddfed4de15bc3 291 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 3.2E-6 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 GYO_1231 74bf8bab595e67ca536ddfed4de15bc3 291 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 3.2E-6 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 GYO_1231 74bf8bab595e67ca536ddfed4de15bc3 291 Gene3D G3DSA:3.40.190.10 93 163 3.8E-24 T 14-10-2018 GYO_1231 74bf8bab595e67ca536ddfed4de15bc3 291 Gene3D G3DSA:3.40.190.10 164 258 3.8E-24 T 14-10-2018 GYO_1231 74bf8bab595e67ca536ddfed4de15bc3 291 Pfam PF03466 LysR substrate binding domain 87 287 1.6E-30 T 14-10-2018 IPR005119 LysR, substrate-binding GYO_1231 74bf8bab595e67ca536ddfed4de15bc3 291 SUPERFAMILY SSF46785 1 87 9.87E-23 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily GYO_1231 74bf8bab595e67ca536ddfed4de15bc3 291 Gene3D G3DSA:1.10.10.10 1 92 7.0E-26 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily GYO_1231 74bf8bab595e67ca536ddfed4de15bc3 291 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 62 4.7E-18 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 GYO_3427 28fc0940de131d7528f15a641f6f2195 130 SUPERFAMILY SSF50249 5 87 1.35E-24 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold GYO_3427 28fc0940de131d7528f15a641f6f2195 130 Pfam PF00575 S1 RNA binding domain 4 77 1.9E-21 T 14-10-2018 IPR003029 S1 domain GO:0003676 GYO_3427 28fc0940de131d7528f15a641f6f2195 130 PRINTS PR00681 Ribosomal protein S1 signature 60 78 3.7E-11 T 14-10-2018 GYO_3427 28fc0940de131d7528f15a641f6f2195 130 PRINTS PR00681 Ribosomal protein S1 signature 21 40 3.7E-11 T 14-10-2018 GYO_3427 28fc0940de131d7528f15a641f6f2195 130 SMART SM00316 6 77 8.8E-27 T 14-10-2018 IPR022967 RNA-binding domain, S1 GYO_3427 28fc0940de131d7528f15a641f6f2195 130 Gene3D G3DSA:2.40.50.140 2 88 7.6E-34 T 14-10-2018 GYO_4362 9c1635cfd466279981e93eb6ebb55da4 270 Gene3D G3DSA:3.30.1240.10 86 192 3.2E-90 T 14-10-2018 GYO_4362 9c1635cfd466279981e93eb6ebb55da4 270 Gene3D G3DSA:3.40.50.1000 3 263 3.2E-90 T 14-10-2018 IPR023214 HAD superfamily GYO_4362 9c1635cfd466279981e93eb6ebb55da4 270 ProSitePatterns PS01229 Hypothetical cof family signature 2. 217 239 - T 14-10-2018 GYO_4362 9c1635cfd466279981e93eb6ebb55da4 270 Pfam PF08282 haloacid dehalogenase-like hydrolase 5 263 2.4E-69 T 14-10-2018 GYO_4362 9c1635cfd466279981e93eb6ebb55da4 270 ProSitePatterns PS01228 Hypothetical cof family signature 1. 4 15 - T 14-10-2018 GYO_4362 9c1635cfd466279981e93eb6ebb55da4 270 TIGRFAM TIGR00099 Cof-subfamily: Cof-like hydrolase 4 263 4.6E-68 T 14-10-2018 IPR000150 Cof family GO:0016787 GYO_4362 9c1635cfd466279981e93eb6ebb55da4 270 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 4 81 1.2E-15 T 14-10-2018 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: R-HSA-446205 GYO_4362 9c1635cfd466279981e93eb6ebb55da4 270 SUPERFAMILY SSF56784 1 268 1.25E-75 T 14-10-2018 IPR036412 HAD-like superfamily GYO_0656 340ade8d4cffe423a2c98bec9a331f5e 85 Pfam PF04226 Transglycosylase associated protein 34 79 1.2E-8 T 14-10-2018 IPR007341 Transglycosylase-associated protein GO:0016021 GYO_3045 9be09e4b169ce4144a66c8b16fb871ae 337 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 184 204 4.2E-61 T 14-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 GYO_3045 9be09e4b169ce4144a66c8b16fb871ae 337 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 297 323 4.2E-61 T 14-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 GYO_3045 9be09e4b169ce4144a66c8b16fb871ae 337 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 129 148 4.2E-61 T 14-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 GYO_3045 9be09e4b169ce4144a66c8b16fb871ae 337 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 44 62 4.2E-61 T 14-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 GYO_3045 9be09e4b169ce4144a66c8b16fb871ae 337 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 64 87 4.2E-61 T 14-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 GYO_3045 9be09e4b169ce4144a66c8b16fb871ae 337 SUPERFAMILY SSF53067 8 144 3.17E-37 T 14-10-2018 GYO_3045 9be09e4b169ce4144a66c8b16fb871ae 337 TIGRFAM TIGR00904 mreB: cell shape determining protein, MreB/Mrl family 6 333 1.3E-164 T 14-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 GYO_3045 9be09e4b169ce4144a66c8b16fb871ae 337 Gene3D G3DSA:3.30.420.40 9 324 5.1E-132 T 14-10-2018 GYO_3045 9be09e4b169ce4144a66c8b16fb871ae 337 Gene3D G3DSA:3.90.640.10 183 256 5.1E-132 T 14-10-2018 GYO_3045 9be09e4b169ce4144a66c8b16fb871ae 337 Pfam PF06723 MreB/Mbl protein 7 331 6.7E-152 T 14-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 GYO_3045 9be09e4b169ce4144a66c8b16fb871ae 337 Gene3D G3DSA:3.30.420.40 151 314 5.1E-132 T 14-10-2018 GYO_3045 9be09e4b169ce4144a66c8b16fb871ae 337 SUPERFAMILY SSF53067 147 329 4.91E-51 T 14-10-2018 GYO_1670 0adb7e68ed9a4f6e1047cb25ef19ecc4 251 Pfam PF04542 Sigma-70 region 2 36 106 8.0E-12 T 14-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 GYO_1670 0adb7e68ed9a4f6e1047cb25ef19ecc4 251 Gene3D G3DSA:1.10.1740.10 20 103 1.3E-10 T 14-10-2018 GYO_1670 0adb7e68ed9a4f6e1047cb25ef19ecc4 251 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 33 230 4.4E-16 T 14-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 GYO_1670 0adb7e68ed9a4f6e1047cb25ef19ecc4 251 SUPERFAMILY SSF88946 24 104 8.48E-19 T 14-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 GYO_1670 0adb7e68ed9a4f6e1047cb25ef19ecc4 251 TIGRFAM TIGR02895 spore_sigI: RNA polymerase sigma-I factor 22 245 8.0E-88 T 14-10-2018 IPR014244 RNA polymerase sigma-I type GYO_1670 0adb7e68ed9a4f6e1047cb25ef19ecc4 251 Hamap MF_02064 RNA polymerase sigma factor SigI [sigI]. 17 247 29.829 T 14-10-2018 IPR014244 RNA polymerase sigma-I type GYO_1670 0adb7e68ed9a4f6e1047cb25ef19ecc4 251 PIRSF PIRSF038953 7 251 3.8E-72 T 14-10-2018 IPR014244 RNA polymerase sigma-I type GYO_2325 349ee07a66dbe9a122556729e96df12a 287 Pfam PF01476 LysM domain 28 69 1.3E-13 T 14-10-2018 IPR018392 LysM domain GYO_2325 349ee07a66dbe9a122556729e96df12a 287 Pfam PF01476 LysM domain 80 121 3.4E-14 T 14-10-2018 IPR018392 LysM domain GYO_2325 349ee07a66dbe9a122556729e96df12a 287 SMART SM00257 27 70 8.9E-16 T 14-10-2018 IPR018392 LysM domain GYO_2325 349ee07a66dbe9a122556729e96df12a 287 SMART SM00257 79 122 4.9E-16 T 14-10-2018 IPR018392 LysM domain GYO_2325 349ee07a66dbe9a122556729e96df12a 287 Pfam PF06725 3D domain 226 287 4.5E-22 T 14-10-2018 IPR010611 3D domain GO:0004553|GO:0009254|GO:0019867 GYO_2325 349ee07a66dbe9a122556729e96df12a 287 SUPERFAMILY SSF50685 228 273 2.76E-8 T 14-10-2018 IPR036908 RlpA-like domain superfamily GYO_2325 349ee07a66dbe9a122556729e96df12a 287 Gene3D G3DSA:2.40.40.10 127 277 6.0E-7 T 14-10-2018 IPR036908 RlpA-like domain superfamily GYO_2325 349ee07a66dbe9a122556729e96df12a 287 SUPERFAMILY SSF54106 27 70 1.26E-10 T 14-10-2018 GYO_2325 349ee07a66dbe9a122556729e96df12a 287 Gene3D G3DSA:3.10.350.10 76 126 1.9E-19 T 14-10-2018 IPR036779 LysM domain superfamily GYO_2325 349ee07a66dbe9a122556729e96df12a 287 Gene3D G3DSA:3.10.350.10 24 75 1.4E-16 T 14-10-2018 IPR036779 LysM domain superfamily GYO_2325 349ee07a66dbe9a122556729e96df12a 287 SUPERFAMILY SSF54106 79 121 4.84E-11 T 14-10-2018 GYO_2440 81db3b6f3f0976bcffc6704bc73391df 254 Gene3D G3DSA:3.40.50.720 5 253 3.6E-75 T 14-10-2018 GYO_2440 81db3b6f3f0976bcffc6704bc73391df 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 133 149 7.1E-42 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR GYO_2440 81db3b6f3f0976bcffc6704bc73391df 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 159 178 7.1E-42 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR GYO_2440 81db3b6f3f0976bcffc6704bc73391df 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 215 235 7.1E-42 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR GYO_2440 81db3b6f3f0976bcffc6704bc73391df 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 86 97 7.1E-42 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR GYO_2440 81db3b6f3f0976bcffc6704bc73391df 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 180 197 7.1E-42 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR GYO_2440 81db3b6f3f0976bcffc6704bc73391df 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 14 31 7.1E-42 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR GYO_2440 81db3b6f3f0976bcffc6704bc73391df 254 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 22 251 8.1E-60 T 14-10-2018 GYO_2440 81db3b6f3f0976bcffc6704bc73391df 254 TIGRFAM TIGR01832 kduD: 2-deoxy-D-gluconate 3-dehydrogenase 8 254 2.9E-120 T 14-10-2018 IPR011286 2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase GO:0008678|GO:0051287|GO:0055114 KEGG: 00040+1.1.1.127|MetaCyc: PWY-6507|MetaCyc: PWY-7562 GYO_2440 81db3b6f3f0976bcffc6704bc73391df 254 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 159 178 2.9E-13 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR GYO_2440 81db3b6f3f0976bcffc6704bc73391df 254 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 86 97 2.9E-13 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR GYO_2440 81db3b6f3f0976bcffc6704bc73391df 254 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 139 147 2.9E-13 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR GYO_2440 81db3b6f3f0976bcffc6704bc73391df 254 SUPERFAMILY SSF51735 11 252 3.21E-74 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily GYO_2440 81db3b6f3f0976bcffc6704bc73391df 254 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 146 174 - T 14-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 GYO_0227 c9731ffc2a3e0aec2c1928fdf2663216 393 Pfam PF14550 Putative phage serine protease XkdF 40 153 3.5E-46 T 14-10-2018 IPR027924 Phage-like element PBSX protein, XkdF GYO_0306 c9731ffc2a3e0aec2c1928fdf2663216 393 Pfam PF14550 Putative phage serine protease XkdF 40 153 3.5E-46 T 14-10-2018 IPR027924 Phage-like element PBSX protein, XkdF GYO_4002 018bf2ffd219eb263d2e712a70b338de 141 SUPERFAMILY SSF54637 1 138 1.32E-49 T 14-10-2018 IPR029069 HotDog domain superfamily GYO_4002 018bf2ffd219eb263d2e712a70b338de 141 Gene3D G3DSA:3.10.129.10 1 139 2.4E-60 T 14-10-2018 GYO_4002 018bf2ffd219eb263d2e712a70b338de 141 Pfam PF07977 FabA-like domain 11 133 2.2E-37 T 14-10-2018 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 GYO_4002 018bf2ffd219eb263d2e712a70b338de 141 TIGRFAM TIGR01750 fabZ: beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ 2 138 2.5E-58 T 14-10-2018 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ GO:0005737|GO:0006633|GO:0016836 KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 GYO_4002 018bf2ffd219eb263d2e712a70b338de 141 Hamap MF_00406 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ [fabZ]. 2 141 34.829 T 14-10-2018 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ GO:0005737|GO:0006633|GO:0016836 KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 GYO_4448 2eb3d735149727e65fa4bd40be190205 166 Gene3D G3DSA:3.10.450.40 104 166 1.4E-10 T 14-10-2018 GYO_4448 2eb3d735149727e65fa4bd40be190205 166 Gene3D G3DSA:3.10.450.40 34 103 4.3E-8 T 14-10-2018 GYO_4448 2eb3d735149727e65fa4bd40be190205 166 Pfam PF03413 Peptidase propeptide and YPEB domain 110 164 9.5E-6 T 14-10-2018 IPR025711 PepSY domain GYO_4448 2eb3d735149727e65fa4bd40be190205 166 Pfam PF03413 Peptidase propeptide and YPEB domain 44 101 2.0E-5 T 14-10-2018 IPR025711 PepSY domain GYO_2178 e296cb8900b2894961f7572ca4e4f84c 655 Pfam PF00986 DNA gyrase B subunit, carboxyl terminus 569 630 2.2E-30 T 14-10-2018 IPR002288 DNA gyrase B subunit, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 GYO_2178 e296cb8900b2894961f7572ca4e4f84c 655 Pfam PF01751 Toprim domain 424 527 1.7E-16 T 14-10-2018 IPR006171 TOPRIM domain GYO_2178 e296cb8900b2894961f7572ca4e4f84c 655 Gene3D G3DSA:3.40.50.670 411 643 6.1E-102 T 14-10-2018 IPR013759 DNA topoisomerase, type IIA, subunit B, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 GYO_2178 e296cb8900b2894961f7572ca4e4f84c 655 TIGRFAM TIGR01058 parE_Gpos: DNA topoisomerase IV, B subunit 8 643 0.0 T 14-10-2018 IPR005740 DNA topoisomerase 4 subunit B, Firmicutes/Mollicutes GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 GYO_2178 e296cb8900b2894961f7572ca4e4f84c 655 Gene3D G3DSA:3.30.230.10 222 403 4.0E-71 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup GYO_2178 e296cb8900b2894961f7572ca4e4f84c 655 SUPERFAMILY SSF55874 9 220 8.12E-68 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily GYO_2178 e296cb8900b2894961f7572ca4e4f84c 655 Pfam PF00204 DNA gyrase B 223 393 1.7E-58 T 14-10-2018 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 GYO_2178 e296cb8900b2894961f7572ca4e4f84c 655 PRINTS PR01159 DNA gyrase subunit B signature 363 377 5.6E-58 T 14-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 GYO_2178 e296cb8900b2894961f7572ca4e4f84c 655 PRINTS PR01159 DNA gyrase subunit B signature 313 329 5.6E-58 T 14-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 GYO_2178 e296cb8900b2894961f7572ca4e4f84c 655 PRINTS PR01159 DNA gyrase subunit B signature 377 397 5.6E-58 T 14-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 GYO_2178 e296cb8900b2894961f7572ca4e4f84c 655 PRINTS PR01159 DNA gyrase subunit B signature 610 626 5.6E-58 T 14-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 GYO_2178 e296cb8900b2894961f7572ca4e4f84c 655 PRINTS PR01159 DNA gyrase subunit B signature 198 211 5.6E-58 T 14-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 GYO_2178 e296cb8900b2894961f7572ca4e4f84c 655 PRINTS PR01159 DNA gyrase subunit B signature 475 484 5.6E-58 T 14-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 GYO_2178 e296cb8900b2894961f7572ca4e4f84c 655 PRINTS PR01159 DNA gyrase subunit B signature 183 198 5.6E-58 T 14-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 GYO_2178 e296cb8900b2894961f7572ca4e4f84c 655 PRINTS PR01159 DNA gyrase subunit B signature 222 244 5.6E-58 T 14-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 GYO_2178 e296cb8900b2894961f7572ca4e4f84c 655 PRINTS PR01159 DNA gyrase subunit B signature 9 19 5.6E-58 T 14-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 GYO_2178 e296cb8900b2894961f7572ca4e4f84c 655 PRINTS PR01159 DNA gyrase subunit B signature 594 606 5.6E-58 T 14-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 GYO_2178 e296cb8900b2894961f7572ca4e4f84c 655 Hamap MF_00939 DNA topoisomerase 4 subunit B [parE]. 7 639 48.319 T 14-10-2018 IPR005740 DNA topoisomerase 4 subunit B, Firmicutes/Mollicutes GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 GYO_2178 e296cb8900b2894961f7572ca4e4f84c 655 Gene3D G3DSA:3.30.565.10 6 221 2.3E-87 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily GYO_2178 e296cb8900b2894961f7572ca4e4f84c 655 PRINTS PR00418 DNA topoisomerase II family signature 73 86 4.9E-70 T 14-10-2018 GYO_2178 e296cb8900b2894961f7572ca4e4f84c 655 PRINTS PR00418 DNA topoisomerase II family signature 509 526 4.9E-70 T 14-10-2018 GYO_2178 e296cb8900b2894961f7572ca4e4f84c 655 PRINTS PR00418 DNA topoisomerase II family signature 573 589 4.9E-70 T 14-10-2018 GYO_2178 e296cb8900b2894961f7572ca4e4f84c 655 PRINTS PR00418 DNA topoisomerase II family signature 38 53 4.9E-70 T 14-10-2018 GYO_2178 e296cb8900b2894961f7572ca4e4f84c 655 PRINTS PR00418 DNA topoisomerase II family signature 529 541 4.9E-70 T 14-10-2018 GYO_2178 e296cb8900b2894961f7572ca4e4f84c 655 PRINTS PR00418 DNA topoisomerase II family signature 269 282 4.9E-70 T 14-10-2018 GYO_2178 e296cb8900b2894961f7572ca4e4f84c 655 PRINTS PR00418 DNA topoisomerase II family signature 115 129 4.9E-70 T 14-10-2018 GYO_2178 e296cb8900b2894961f7572ca4e4f84c 655 PRINTS PR00418 DNA topoisomerase II family signature 425 439 4.9E-70 T 14-10-2018 GYO_2178 e296cb8900b2894961f7572ca4e4f84c 655 PRINTS PR00418 DNA topoisomerase II family signature 491 507 4.9E-70 T 14-10-2018 GYO_2178 e296cb8900b2894961f7572ca4e4f84c 655 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 34 155 5.8E-21 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase GYO_2178 e296cb8900b2894961f7572ca4e4f84c 655 SUPERFAMILY SSF54211 223 393 2.28E-52 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold GYO_2178 e296cb8900b2894961f7572ca4e4f84c 655 ProSitePatterns PS00177 DNA topoisomerase II signature. 427 435 - T 14-10-2018 IPR018522 DNA topoisomerase, type IIA, conserved site GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 GYO_2178 e296cb8900b2894961f7572ca4e4f84c 655 SMART SM00387 34 178 4.5E-24 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase GYO_2178 e296cb8900b2894961f7572ca4e4f84c 655 SUPERFAMILY SSF56719 399 634 1.2E-86 T 14-10-2018 IPR013760 DNA topoisomerase, type IIA-like domain superfamily GO:0003918|GO:0005524 Reactome: R-HSA-4615885 GYO_2178 e296cb8900b2894961f7572ca4e4f84c 655 SMART SM00433 38 634 0.0 T 14-10-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 GYO_2875 fccc87b3af998d59e85abd35644824a6 470 SUPERFAMILY SSF52821 236 350 5.11E-15 T 14-10-2018 IPR036873 Rhodanese-like domain superfamily GYO_2875 fccc87b3af998d59e85abd35644824a6 470 Gene3D G3DSA:3.40.250.10 370 470 2.7E-24 T 14-10-2018 IPR036873 Rhodanese-like domain superfamily GYO_2875 fccc87b3af998d59e85abd35644824a6 470 Pfam PF00581 Rhodanese-like domain 273 334 4.9E-7 T 14-10-2018 IPR001763 Rhodanese-like domain GYO_2875 fccc87b3af998d59e85abd35644824a6 470 Pfam PF00581 Rhodanese-like domain 378 464 4.7E-13 T 14-10-2018 IPR001763 Rhodanese-like domain GYO_2875 fccc87b3af998d59e85abd35644824a6 470 SMART SM00849 12 196 1.1E-23 T 14-10-2018 IPR001279 Metallo-beta-lactamase GYO_2875 fccc87b3af998d59e85abd35644824a6 470 Gene3D G3DSA:3.60.15.10 1 259 1.8E-85 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like GYO_2875 fccc87b3af998d59e85abd35644824a6 470 SMART SM00450 266 365 1.2 T 14-10-2018 IPR001763 Rhodanese-like domain GYO_2875 fccc87b3af998d59e85abd35644824a6 470 SMART SM00450 372 468 6.0E-12 T 14-10-2018 IPR001763 Rhodanese-like domain GYO_2875 fccc87b3af998d59e85abd35644824a6 470 Gene3D G3DSA:3.40.250.10 267 366 6.5E-21 T 14-10-2018 IPR036873 Rhodanese-like domain superfamily GYO_2875 fccc87b3af998d59e85abd35644824a6 470 Pfam PF00753 Metallo-beta-lactamase superfamily 13 187 5.8E-12 T 14-10-2018 IPR001279 Metallo-beta-lactamase GYO_2875 fccc87b3af998d59e85abd35644824a6 470 SUPERFAMILY SSF56281 4 261 1.68E-50 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like GYO_2875 fccc87b3af998d59e85abd35644824a6 470 SUPERFAMILY SSF52821 364 469 1.57E-26 T 14-10-2018 IPR036873 Rhodanese-like domain superfamily GYO_2827 4eac9fdbe2d715967ca6973bc65fa83c 771 SMART SM00849 503 714 5.8E-15 T 14-10-2018 IPR001279 Metallo-beta-lactamase GYO_2827 4eac9fdbe2d715967ca6973bc65fa83c 771 Pfam PF03772 Competence protein 203 464 3.3E-66 T 14-10-2018 IPR004477 ComEC/Rec2-related protein GYO_2827 4eac9fdbe2d715967ca6973bc65fa83c 771 Gene3D G3DSA:3.60.15.10 491 756 1.9E-71 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like GYO_2827 4eac9fdbe2d715967ca6973bc65fa83c 771 SUPERFAMILY SSF56281 495 750 1.49E-52 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like GYO_2827 4eac9fdbe2d715967ca6973bc65fa83c 771 Pfam PF13567 Domain of unknown function (DUF4131) 16 165 2.6E-20 T 14-10-2018 IPR025405 Domain of unknown function DUF4131 GYO_2827 4eac9fdbe2d715967ca6973bc65fa83c 771 TIGRFAM TIGR00361 ComEC_Rec2: DNA internalization-related competence protein ComEC/Rec2 62 743 4.2E-281 T 14-10-2018 IPR004797 Competence protein ComEC/Rec2 GO:0016021|GO:0030420 GYO_2827 4eac9fdbe2d715967ca6973bc65fa83c 771 TIGRFAM TIGR00360 ComEC_N-term: ComEC/Rec2-related protein 224 394 4.0E-52 T 14-10-2018 IPR004477 ComEC/Rec2-related protein GYO_2827 4eac9fdbe2d715967ca6973bc65fa83c 771 Pfam PF00753 Metallo-beta-lactamase superfamily 502 713 1.0E-19 T 14-10-2018 IPR001279 Metallo-beta-lactamase GYO_2077 900d1ae00a4bc7103cc7f58cd211499e 2543 SMART SM00825 Beta-ketoacyl synthase 1531 1949 3.0E-130 T 14-10-2018 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain GYO_2077 900d1ae00a4bc7103cc7f58cd211499e 2543 SMART SM00825 Beta-ketoacyl synthase 530 963 2.7E-126 T 14-10-2018 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain GYO_2077 900d1ae00a4bc7103cc7f58cd211499e 2543 Pfam PF00975 Thioesterase domain 2235 2511 7.8E-68 T 14-10-2018 IPR001031 Thioesterase GO:0009058|GO:0016788 Reactome: R-HSA-75105 GYO_2077 900d1ae00a4bc7103cc7f58cd211499e 2543 SMART SM00823 Phosphopantetheine attachment site 382 452 1.5E-7 T 14-10-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 GYO_2077 900d1ae00a4bc7103cc7f58cd211499e 2543 SMART SM00823 Phosphopantetheine attachment site 1414 1485 1.7E-6 T 14-10-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 GYO_2077 900d1ae00a4bc7103cc7f58cd211499e 2543 SUPERFAMILY SSF53901 526 954 2.13E-66 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 GYO_2077 900d1ae00a4bc7103cc7f58cd211499e 2543 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 1530 1758 2.5E-75 T 14-10-2018 IPR014030 Beta-ketoacyl synthase, N-terminal GYO_2077 900d1ae00a4bc7103cc7f58cd211499e 2543 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 528 778 3.7E-66 T 14-10-2018 IPR014030 Beta-ketoacyl synthase, N-terminal GYO_2077 900d1ae00a4bc7103cc7f58cd211499e 2543 Gene3D G3DSA:3.30.70.3050 2004 2108 7.5E-192 T 14-10-2018 GYO_2077 900d1ae00a4bc7103cc7f58cd211499e 2543 SMART SM01294 383 448 5.8E-4 T 14-10-2018 GYO_2077 900d1ae00a4bc7103cc7f58cd211499e 2543 SUPERFAMILY SSF53335 128 327 2.65E-30 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase GYO_2077 900d1ae00a4bc7103cc7f58cd211499e 2543 Gene3D G3DSA:1.10.1200.10 1398 1487 6.3E-13 T 14-10-2018 IPR036736 ACP-like superfamily GYO_2077 900d1ae00a4bc7103cc7f58cd211499e 2543 ProSitePatterns PS00098 Thiolases acyl-enzyme intermediate signature. 697 715 - T 14-10-2018 IPR020615 Thiolase, acyl-enzyme intermediate active site GO:0016747 GYO_2077 900d1ae00a4bc7103cc7f58cd211499e 2543 Gene3D G3DSA:3.40.47.10 530 1110 1.8E-182 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 GYO_2077 900d1ae00a4bc7103cc7f58cd211499e 2543 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 692 708 - T 14-10-2018 IPR018201 Beta-ketoacyl synthase, active site GYO_2077 900d1ae00a4bc7103cc7f58cd211499e 2543 ProSitePatterns PS00012 Phosphopantetheine attachment site. 2164 2179 - T 14-10-2018 IPR006162 Phosphopantetheine attachment site GYO_2077 900d1ae00a4bc7103cc7f58cd211499e 2543 Gene3D G3DSA:3.40.47.10 1531 2119 7.5E-192 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 GYO_2077 900d1ae00a4bc7103cc7f58cd211499e 2543 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 1766 1889 8.4E-33 T 14-10-2018 IPR014031 Beta-ketoacyl synthase, C-terminal GYO_2077 900d1ae00a4bc7103cc7f58cd211499e 2543 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 786 903 1.4E-36 T 14-10-2018 IPR014031 Beta-ketoacyl synthase, C-terminal GYO_2077 900d1ae00a4bc7103cc7f58cd211499e 2543 Gene3D G3DSA:3.10.129.110 1133 1395 1.9E-47 T 14-10-2018 GYO_2077 900d1ae00a4bc7103cc7f58cd211499e 2543 SUPERFAMILY SSF47336 2144 2217 5.63E-12 T 14-10-2018 IPR036736 ACP-like superfamily GYO_2077 900d1ae00a4bc7103cc7f58cd211499e 2543 SUPERFAMILY SSF47336 379 541 5.63E-13 T 14-10-2018 IPR036736 ACP-like superfamily GYO_2077 900d1ae00a4bc7103cc7f58cd211499e 2543 SUPERFAMILY SSF53474 2215 2498 4.29E-46 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold GYO_2077 900d1ae00a4bc7103cc7f58cd211499e 2543 SUPERFAMILY SSF53901 1527 1936 5.92E-77 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 GYO_2077 900d1ae00a4bc7103cc7f58cd211499e 2543 Gene3D G3DSA:1.10.1200.10 2130 2212 3.5E-11 T 14-10-2018 IPR036736 ACP-like superfamily GYO_2077 900d1ae00a4bc7103cc7f58cd211499e 2543 SUPERFAMILY SSF47336 1407 1488 2.36E-12 T 14-10-2018 IPR036736 ACP-like superfamily GYO_2077 900d1ae00a4bc7103cc7f58cd211499e 2543 Pfam PF14765 Polyketide synthase dehydratase 1132 1392 1.9E-23 T 14-10-2018 IPR020807 Polyketide synthase, dehydratase domain Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 GYO_2077 900d1ae00a4bc7103cc7f58cd211499e 2543 Pfam PF08242 Methyltransferase domain 165 269 1.3E-17 T 14-10-2018 IPR013217 Methyltransferase type 12 GYO_2077 900d1ae00a4bc7103cc7f58cd211499e 2543 Gene3D G3DSA:3.40.50.150 43 337 3.4E-50 T 14-10-2018 GYO_2077 900d1ae00a4bc7103cc7f58cd211499e 2543 ProSitePatterns PS00012 Phosphopantetheine attachment site. 1440 1455 - T 14-10-2018 IPR006162 Phosphopantetheine attachment site GYO_2077 900d1ae00a4bc7103cc7f58cd211499e 2543 Gene3D G3DSA:1.10.1200.10 373 456 5.2E-16 T 14-10-2018 IPR036736 ACP-like superfamily GYO_2077 900d1ae00a4bc7103cc7f58cd211499e 2543 Pfam PF00550 Phosphopantetheine attachment site 1412 1480 1.6E-9 T 14-10-2018 IPR009081 Phosphopantetheine binding ACP domain GYO_2077 900d1ae00a4bc7103cc7f58cd211499e 2543 Pfam PF00550 Phosphopantetheine attachment site 385 448 1.8E-10 T 14-10-2018 IPR009081 Phosphopantetheine binding ACP domain GYO_2077 900d1ae00a4bc7103cc7f58cd211499e 2543 Pfam PF00550 Phosphopantetheine attachment site 2144 2205 6.6E-10 T 14-10-2018 IPR009081 Phosphopantetheine binding ACP domain GYO_2077 900d1ae00a4bc7103cc7f58cd211499e 2543 Gene3D G3DSA:3.30.70.3290 978 1101 1.8E-182 T 14-10-2018 GYO_2077 900d1ae00a4bc7103cc7f58cd211499e 2543 Pfam PF16197 Ketoacyl-synthetase C-terminal extension 907 1026 2.4E-7 T 14-10-2018 IPR032821 Ketoacyl-synthetase, C-terminal extension Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 GYO_2077 900d1ae00a4bc7103cc7f58cd211499e 2543 Pfam PF16197 Ketoacyl-synthetase C-terminal extension 1894 2005 2.4E-14 T 14-10-2018 IPR032821 Ketoacyl-synthetase, C-terminal extension Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 GYO_2066 80a3db91dbd582b7028c45742711d32f 324 SMART SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. 8 302 1.6E-32 T 14-10-2018 IPR020801 Polyketide synthase, acyl transferase domain GYO_2066 80a3db91dbd582b7028c45742711d32f 324 SUPERFAMILY SSF52151 5 292 5.49E-53 T 14-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GYO_2066 80a3db91dbd582b7028c45742711d32f 324 SUPERFAMILY SSF55048 134 197 1.12E-5 T 14-10-2018 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding GYO_2066 80a3db91dbd582b7028c45742711d32f 324 Gene3D G3DSA:3.40.366.10 5 305 8.2E-71 T 14-10-2018 IPR001227 Acyl transferase domain superfamily GO:0016740 GYO_2066 80a3db91dbd582b7028c45742711d32f 324 Pfam PF00698 Acyl transferase domain 6 310 7.3E-35 T 14-10-2018 IPR014043 Acyl transferase GYO_2260 e51c27e9d671a70d12933986356aac49 290 Gene3D G3DSA:3.40.190.290 94 289 2.9E-29 T 14-10-2018 GYO_2260 e51c27e9d671a70d12933986356aac49 290 SUPERFAMILY SSF53850 92 288 2.05E-27 T 14-10-2018 GYO_2260 e51c27e9d671a70d12933986356aac49 290 Gene3D G3DSA:1.10.10.10 1 84 3.4E-20 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily GYO_2260 e51c27e9d671a70d12933986356aac49 290 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 31 41 3.9E-8 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 GYO_2260 e51c27e9d671a70d12933986356aac49 290 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 20 31 3.9E-8 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 GYO_2260 e51c27e9d671a70d12933986356aac49 290 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 41 52 3.9E-8 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 GYO_2260 e51c27e9d671a70d12933986356aac49 290 Pfam PF03466 LysR substrate binding domain 92 287 5.7E-30 T 14-10-2018 IPR005119 LysR, substrate-binding GYO_2260 e51c27e9d671a70d12933986356aac49 290 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 64 7.6E-18 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 GYO_2260 e51c27e9d671a70d12933986356aac49 290 SUPERFAMILY SSF46785 1 114 5.97E-19 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily GYO_0358 23b3571bb3ac664e36ff4ea39aecb014 642 Gene3D G3DSA:3.40.50.1700 420 642 3.4E-61 T 14-10-2018 IPR036881 Glycoside hydrolase family 3 C-terminal domain superfamily GO:0004553|GO:0005975 GYO_0358 23b3571bb3ac664e36ff4ea39aecb014 642 Gene3D G3DSA:3.20.20.300 27 419 7.7E-171 T 14-10-2018 IPR036962 Glycoside hydrolase, family 3, N-terminal domain superfamily GO:0004553|GO:0005975 GYO_0358 23b3571bb3ac664e36ff4ea39aecb014 642 SUPERFAMILY SSF51445 30 434 3.16E-101 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily GYO_0358 23b3571bb3ac664e36ff4ea39aecb014 642 Pfam PF01915 Glycosyl hydrolase family 3 C-terminal domain 436 634 6.4E-17 T 14-10-2018 IPR002772 Glycoside hydrolase family 3 C-terminal domain GO:0004553|GO:0005975 GYO_0358 23b3571bb3ac664e36ff4ea39aecb014 642 SUPERFAMILY SSF52279 436 635 1.22E-6 T 14-10-2018 IPR036881 Glycoside hydrolase family 3 C-terminal domain superfamily GO:0004553|GO:0005975 GYO_0358 23b3571bb3ac664e36ff4ea39aecb014 642 ProSitePatterns PS00775 Glycosyl hydrolases family 3 active site. 304 321 - T 14-10-2018 IPR019800 Glycoside hydrolase, family 3, active site GO:0004553|GO:0005975 GYO_0358 23b3571bb3ac664e36ff4ea39aecb014 642 Pfam PF00933 Glycosyl hydrolase family 3 N terminal domain 43 392 4.1E-128 T 14-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 GYO_1027 c7d04cd02c86d6b71fa027f06aa8a42d 433 Pfam PF03600 Citrate transporter 13 377 3.1E-42 T 14-10-2018 IPR004680 Citrate transporter-like domain GO:0016021|GO:0055085 Reactome: R-HSA-5662702 GYO_1027 c7d04cd02c86d6b71fa027f06aa8a42d 433 TIGRFAM TIGR00784 citMHS: citrate transporter 2 432 8.4E-242 T 14-10-2018 IPR014738 Citrate transporter GO:0015137|GO:0015746 GYO_0006 8d2154eca4350d1b9419cf614a27643a 638 Pfam PF00986 DNA gyrase B subunit, carboxyl terminus 568 627 6.8E-30 T 14-10-2018 IPR002288 DNA gyrase B subunit, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 GYO_0006 8d2154eca4350d1b9419cf614a27643a 638 Pfam PF01751 Toprim domain 423 534 5.6E-19 T 14-10-2018 IPR006171 TOPRIM domain GYO_0006 8d2154eca4350d1b9419cf614a27643a 638 SUPERFAMILY SSF55874 8 220 4.98E-75 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily GYO_0006 8d2154eca4350d1b9419cf614a27643a 638 SMART SM00387 33 177 1.7E-26 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase GYO_0006 8d2154eca4350d1b9419cf614a27643a 638 TIGRFAM TIGR01059 gyrB: DNA gyrase, B subunit 8 638 0.0 T 14-10-2018 IPR011557 DNA gyrase, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 GYO_0006 8d2154eca4350d1b9419cf614a27643a 638 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 34 176 6.9E-22 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase GYO_0006 8d2154eca4350d1b9419cf614a27643a 638 Gene3D G3DSA:3.40.50.670 403 638 5.9E-112 T 14-10-2018 IPR013759 DNA topoisomerase, type IIA, subunit B, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 GYO_0006 8d2154eca4350d1b9419cf614a27643a 638 Gene3D G3DSA:3.30.230.10 224 402 2.6E-75 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup GYO_0006 8d2154eca4350d1b9419cf614a27643a 638 Pfam PF00204 DNA gyrase B 225 394 2.6E-65 T 14-10-2018 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 GYO_0006 8d2154eca4350d1b9419cf614a27643a 638 PRINTS PR00418 DNA topoisomerase II family signature 72 85 1.5E-73 T 14-10-2018 GYO_0006 8d2154eca4350d1b9419cf614a27643a 638 PRINTS PR00418 DNA topoisomerase II family signature 115 129 1.5E-73 T 14-10-2018 GYO_0006 8d2154eca4350d1b9419cf614a27643a 638 PRINTS PR00418 DNA topoisomerase II family signature 490 506 1.5E-73 T 14-10-2018 GYO_0006 8d2154eca4350d1b9419cf614a27643a 638 PRINTS PR00418 DNA topoisomerase II family signature 528 540 1.5E-73 T 14-10-2018 GYO_0006 8d2154eca4350d1b9419cf614a27643a 638 PRINTS PR00418 DNA topoisomerase II family signature 37 52 1.5E-73 T 14-10-2018 GYO_0006 8d2154eca4350d1b9419cf614a27643a 638 PRINTS PR00418 DNA topoisomerase II family signature 424 438 1.5E-73 T 14-10-2018 GYO_0006 8d2154eca4350d1b9419cf614a27643a 638 PRINTS PR00418 DNA topoisomerase II family signature 272 285 1.5E-73 T 14-10-2018 GYO_0006 8d2154eca4350d1b9419cf614a27643a 638 PRINTS PR00418 DNA topoisomerase II family signature 508 525 1.5E-73 T 14-10-2018 GYO_0006 8d2154eca4350d1b9419cf614a27643a 638 PRINTS PR00418 DNA topoisomerase II family signature 570 586 1.5E-73 T 14-10-2018 GYO_0006 8d2154eca4350d1b9419cf614a27643a 638 SUPERFAMILY SSF54211 225 395 3.98E-64 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold GYO_0006 8d2154eca4350d1b9419cf614a27643a 638 SMART SM00433 37 631 0.0 T 14-10-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 GYO_0006 8d2154eca4350d1b9419cf614a27643a 638 Hamap MF_01898 DNA gyrase subunit B [gyrB]. 5 638 98.491 T 14-10-2018 IPR011557 DNA gyrase, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 GYO_0006 8d2154eca4350d1b9419cf614a27643a 638 Gene3D G3DSA:3.30.565.10 4 223 2.1E-96 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily GYO_0006 8d2154eca4350d1b9419cf614a27643a 638 PRINTS PR01159 DNA gyrase subunit B signature 591 603 5.6E-80 T 14-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 GYO_0006 8d2154eca4350d1b9419cf614a27643a 638 PRINTS PR01159 DNA gyrase subunit B signature 198 211 5.6E-80 T 14-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 GYO_0006 8d2154eca4350d1b9419cf614a27643a 638 PRINTS PR01159 DNA gyrase subunit B signature 607 623 5.6E-80 T 14-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 GYO_0006 8d2154eca4350d1b9419cf614a27643a 638 PRINTS PR01159 DNA gyrase subunit B signature 8 18 5.6E-80 T 14-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 GYO_0006 8d2154eca4350d1b9419cf614a27643a 638 PRINTS PR01159 DNA gyrase subunit B signature 474 483 5.6E-80 T 14-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 GYO_0006 8d2154eca4350d1b9419cf614a27643a 638 PRINTS PR01159 DNA gyrase subunit B signature 224 246 5.6E-80 T 14-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 GYO_0006 8d2154eca4350d1b9419cf614a27643a 638 PRINTS PR01159 DNA gyrase subunit B signature 364 378 5.6E-80 T 14-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 GYO_0006 8d2154eca4350d1b9419cf614a27643a 638 PRINTS PR01159 DNA gyrase subunit B signature 316 332 5.6E-80 T 14-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 GYO_0006 8d2154eca4350d1b9419cf614a27643a 638 PRINTS PR01159 DNA gyrase subunit B signature 183 198 5.6E-80 T 14-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 GYO_0006 8d2154eca4350d1b9419cf614a27643a 638 PRINTS PR01159 DNA gyrase subunit B signature 378 398 5.6E-80 T 14-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 GYO_0006 8d2154eca4350d1b9419cf614a27643a 638 SUPERFAMILY SSF56719 398 629 2.12E-93 T 14-10-2018 IPR013760 DNA topoisomerase, type IIA-like domain superfamily GO:0003918|GO:0005524 Reactome: R-HSA-4615885 GYO_0006 8d2154eca4350d1b9419cf614a27643a 638 ProSitePatterns PS00177 DNA topoisomerase II signature. 426 434 - T 14-10-2018 IPR018522 DNA topoisomerase, type IIA, conserved site GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 GYO_4393 26473b10d8e693f48ae66af96b489f53 445 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 213 220 - T 14-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 GYO_4393 26473b10d8e693f48ae66af96b489f53 445 Gene3D G3DSA:3.40.605.10 21 439 1.9E-155 T 14-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 GYO_4393 26473b10d8e693f48ae66af96b489f53 445 SUPERFAMILY SSF53720 7 442 1.44E-121 T 14-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 GYO_4393 26473b10d8e693f48ae66af96b489f53 445 Gene3D G3DSA:3.40.309.10 217 419 1.9E-155 T 14-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 GYO_4393 26473b10d8e693f48ae66af96b489f53 445 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 241 252 - T 14-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 GYO_4393 26473b10d8e693f48ae66af96b489f53 445 PIRSF PIRSF036492 1 445 6.1E-166 T 14-10-2018 IPR012394 Aldehyde dehydrogenase NAD(P)-dependent GO:0006081|GO:0055114 GYO_4393 26473b10d8e693f48ae66af96b489f53 445 Pfam PF00171 Aldehyde dehydrogenase family 5 437 6.9E-99 T 14-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 GYO_0857 058b31aafc2c9fced820416568897e5e 346 Gene3D G3DSA:3.30.420.40 9 322 2.6E-127 T 14-10-2018 GYO_0857 058b31aafc2c9fced820416568897e5e 346 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 269 278 4.5E-52 T 14-10-2018 IPR017861 Kae1/TsaD family GYO_0857 058b31aafc2c9fced820416568897e5e 346 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 136 148 4.5E-52 T 14-10-2018 IPR017861 Kae1/TsaD family GYO_0857 058b31aafc2c9fced820416568897e5e 346 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 10 23 4.5E-52 T 14-10-2018 IPR017861 Kae1/TsaD family GYO_0857 058b31aafc2c9fced820416568897e5e 346 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 159 180 4.5E-52 T 14-10-2018 IPR017861 Kae1/TsaD family GYO_0857 058b31aafc2c9fced820416568897e5e 346 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 82 102 4.5E-52 T 14-10-2018 IPR017861 Kae1/TsaD family GYO_0857 058b31aafc2c9fced820416568897e5e 346 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 103 122 4.5E-52 T 14-10-2018 IPR017861 Kae1/TsaD family GYO_0857 058b31aafc2c9fced820416568897e5e 346 TIGRFAM TIGR00329 gcp_kae1: metallohydrolase, glycoprotease/Kae1 family 10 313 3.2E-112 T 14-10-2018 IPR017861 Kae1/TsaD family GYO_0857 058b31aafc2c9fced820416568897e5e 346 Gene3D G3DSA:3.30.420.40 134 300 2.6E-127 T 14-10-2018 GYO_0857 058b31aafc2c9fced820416568897e5e 346 SUPERFAMILY SSF53067 8 128 4.21E-33 T 14-10-2018 GYO_0857 058b31aafc2c9fced820416568897e5e 346 Hamap MF_01445 tRNA N6-adenosine threonylcarbamoyltransferase [tsaD]. 7 338 66.063 T 14-10-2018 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD GO:0002949|GO:0004222 GYO_0857 058b31aafc2c9fced820416568897e5e 346 Pfam PF00814 Glycoprotease family 29 313 3.4E-107 T 14-10-2018 IPR000905 Gcp-like domain GYO_0857 058b31aafc2c9fced820416568897e5e 346 SUPERFAMILY SSF53067 107 315 3.2E-46 T 14-10-2018 GYO_0857 058b31aafc2c9fced820416568897e5e 346 ProSitePatterns PS01016 Glycoprotease family signature. 102 122 - T 14-10-2018 IPR017860 Peptidase M22, conserved site Reactome: R-HSA-6782315 GYO_0857 058b31aafc2c9fced820416568897e5e 346 TIGRFAM TIGR03723 T6A_TsaD_YgjD: tRNA threonylcarbamoyl adenosine modification protein TsaD 9 320 1.9E-136 T 14-10-2018 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD GO:0002949|GO:0004222 GYO_0456 93972e1db0bdbc511d0dabc83604b8b2 307 SUPERFAMILY SSF52540 3 237 5.23E-60 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase GYO_0456 93972e1db0bdbc511d0dabc83604b8b2 307 SMART SM00382 29 221 3.3E-9 T 14-10-2018 IPR003593 AAA+ ATPase domain GYO_0456 93972e1db0bdbc511d0dabc83604b8b2 307 Pfam PF00005 ABC transporter 21 161 1.3E-32 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 GYO_0456 93972e1db0bdbc511d0dabc83604b8b2 307 Gene3D G3DSA:3.40.50.300 2 239 3.6E-62 T 14-10-2018 GYO_0456 93972e1db0bdbc511d0dabc83604b8b2 307 ProSitePatterns PS00211 ABC transporters family signature. 133 147 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 GYO_2808 eb01ad4fad935a1f808b8099890a5dc2 148 Pfam PF09424 Yqey-like protein 5 147 2.8E-53 T 14-10-2018 IPR019004 Uncharacterised protein YqeY/AIM41 GYO_2808 eb01ad4fad935a1f808b8099890a5dc2 148 Gene3D G3DSA:1.10.1510.10 1 91 7.2E-30 T 14-10-2018 GYO_2808 eb01ad4fad935a1f808b8099890a5dc2 148 Gene3D G3DSA:1.10.10.410 92 148 6.4E-27 T 14-10-2018 IPR023168 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B, C-terminal GYO_2808 eb01ad4fad935a1f808b8099890a5dc2 148 SUPERFAMILY SSF89095 1 147 8.37E-43 T 14-10-2018 IPR003789 Aspartyl/glutamyl-tRNA amidotransferase subunit B-like GO:0016884 GYO_4211 797cffa978907904a298790f402ca419 82 Pfam PF04226 Transglycosylase associated protein 34 79 1.6E-10 T 14-10-2018 IPR007341 Transglycosylase-associated protein GO:0016021 GYO_4484 a4c2bc174717cc2b9d1ac7c1c311d582 147 Gene3D G3DSA:3.40.630.30 1 143 2.4E-40 T 14-10-2018 GYO_4484 a4c2bc174717cc2b9d1ac7c1c311d582 147 SUPERFAMILY SSF55729 5 142 7.98E-36 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase GYO_4484 a4c2bc174717cc2b9d1ac7c1c311d582 147 Pfam PF13673 Acetyltransferase (GNAT) domain 41 141 1.0E-17 T 14-10-2018 IPR000182 GNAT domain GYO_3955 13c6261a062795a2beb8bde66c8ec850 305 Gene3D G3DSA:3.40.50.2300 44 290 1.0E-93 T 14-10-2018 GYO_3955 13c6261a062795a2beb8bde66c8ec850 305 Pfam PF13407 Periplasmic binding protein domain 40 290 2.4E-67 T 14-10-2018 IPR025997 Periplasmic binding protein GYO_3955 13c6261a062795a2beb8bde66c8ec850 305 SUPERFAMILY SSF53822 26 304 2.08E-88 T 14-10-2018 IPR028082 Periplasmic binding protein-like I GYO_3955 13c6261a062795a2beb8bde66c8ec850 305 Gene3D G3DSA:3.40.50.2300 138 271 1.0E-93 T 14-10-2018 GYO_3892 36fa058ec0ddc28c2ca946b7d75e8fde 281 Gene3D G3DSA:3.40.50.10170 1 152 1.1E-60 T 14-10-2018 GYO_3892 36fa058ec0ddc28c2ca946b7d75e8fde 281 Gene3D G3DSA:3.30.1180.10 153 281 3.3E-51 T 14-10-2018 GYO_3892 36fa058ec0ddc28c2ca946b7d75e8fde 281 Pfam PF02645 Uncharacterised protein, DegV family COG1307 3 280 1.3E-104 T 14-10-2018 IPR003797 DegV GYO_3892 36fa058ec0ddc28c2ca946b7d75e8fde 281 TIGRFAM TIGR00762 DegV: EDD domain protein, DegV family 3 278 1.1E-106 T 14-10-2018 IPR003797 DegV GYO_3892 36fa058ec0ddc28c2ca946b7d75e8fde 281 SUPERFAMILY SSF82549 1 281 4.45E-96 T 14-10-2018 GYO_1856 280951456b336e8abac47a3c6de97710 160 Hamap MF_00824 Uncharacterized N-acetyltransferase . 1 148 42.496 T 14-10-2018 IPR017274 Putative N-acetyltransferase YlbP GYO_1856 280951456b336e8abac47a3c6de97710 160 Gene3D G3DSA:3.40.630.30 1 160 4.3E-69 T 14-10-2018 GYO_1856 280951456b336e8abac47a3c6de97710 160 SUPERFAMILY SSF55729 25 140 1.35E-12 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase GYO_1856 280951456b336e8abac47a3c6de97710 160 Pfam PF00583 Acetyltransferase (GNAT) family 32 106 1.4E-7 T 14-10-2018 IPR000182 GNAT domain GYO_1856 280951456b336e8abac47a3c6de97710 160 PIRSF PIRSF037732 1 160 6.3E-93 T 14-10-2018 IPR017274 Putative N-acetyltransferase YlbP GYO_4345 6d011e629b1d65954e56014d06d6f0e9 319 Gene3D G3DSA:3.40.800.10 23 316 4.1E-105 T 14-10-2018 GYO_4345 6d011e629b1d65954e56014d06d6f0e9 319 PIRSF PIRSF036979 14 317 3.8E-53 T 14-10-2018 IPR006035 Ureohydrolase GO:0046872 GYO_4345 6d011e629b1d65954e56014d06d6f0e9 319 Pfam PF00491 Arginase family 38 309 6.0E-66 T 14-10-2018 IPR006035 Ureohydrolase GO:0046872 GYO_4345 6d011e629b1d65954e56014d06d6f0e9 319 SUPERFAMILY SSF52768 36 314 1.8E-71 T 14-10-2018 IPR023696 Ureohydrolase domain superfamily GYO_4345 6d011e629b1d65954e56014d06d6f0e9 319 ProSitePatterns PS01053 Arginase family signature. 240 261 - T 14-10-2018 IPR020855 Ureohydrolase, manganese-binding site GO:0016813|GO:0046872 GYO_4345 6d011e629b1d65954e56014d06d6f0e9 319 PRINTS PR00116 Arginase signature 123 138 7.2E-6 T 14-10-2018 IPR006035 Ureohydrolase GO:0046872 GYO_4345 6d011e629b1d65954e56014d06d6f0e9 319 PRINTS PR00116 Arginase signature 237 266 7.2E-6 T 14-10-2018 IPR006035 Ureohydrolase GO:0046872 GYO_4345 6d011e629b1d65954e56014d06d6f0e9 319 TIGRFAM TIGR01227 hutG: formimidoylglutamase 1 311 1.5E-127 T 14-10-2018 IPR005923 Formiminoglutamase GO:0019556|GO:0050415 KEGG: 00340+3.5.3.8 GYO_3217 1500de4e7141a16ab9642bd4566eb120 210 Gene3D G3DSA:3.40.630.30 1 210 1.4E-88 T 14-10-2018 GYO_3217 1500de4e7141a16ab9642bd4566eb120 210 PIRSF PIRSF021278 2 210 2.0E-86 T 14-10-2018 IPR024699 Acetoin utilization protein AcuA GO:0019152|GO:0045150 GYO_3217 1500de4e7141a16ab9642bd4566eb120 210 Pfam PF00583 Acetyltransferase (GNAT) family 40 118 4.6E-6 T 14-10-2018 IPR000182 GNAT domain GYO_3217 1500de4e7141a16ab9642bd4566eb120 210 SUPERFAMILY SSF55729 27 118 4.01E-9 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase GYO_1476 7cc84f8ecfb2dcba3c23d543dd260084 271 Gene3D G3DSA:3.40.1190.20 1 270 5.2E-104 T 14-10-2018 IPR029056 Ribokinase-like GYO_1476 7cc84f8ecfb2dcba3c23d543dd260084 271 SUPERFAMILY SSF53613 5 261 1.71E-83 T 14-10-2018 IPR029056 Ribokinase-like GYO_1476 7cc84f8ecfb2dcba3c23d543dd260084 271 Pfam PF08543 Phosphomethylpyrimidine kinase 13 258 7.2E-96 T 14-10-2018 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase Reactome: R-HSA-6798695|Reactome: R-HSA-964975 GYO_1476 7cc84f8ecfb2dcba3c23d543dd260084 271 TIGRFAM TIGR00097 HMP-P_kinase: hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase 6 260 1.8E-103 T 14-10-2018 IPR004399 Hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase GO:0008972|GO:0009228 KEGG: 00730+2.7.1.49|MetaCyc: PWY-6910|MetaCyc: PWY-7356|MetaCyc: PWY-7357 GYO_4139 bc6b8fc9f283a0ddaefcb3fea240c123 62 Pfam PF01361 Tautomerase enzyme 2 60 1.5E-23 T 14-10-2018 IPR004370 4-oxalocrotonate tautomerase GO:0006725|GO:0016853 GYO_4139 bc6b8fc9f283a0ddaefcb3fea240c123 62 SUPERFAMILY SSF55331 2 61 4.45E-19 T 14-10-2018 IPR014347 Tautomerase/MIF superfamily GYO_4139 bc6b8fc9f283a0ddaefcb3fea240c123 62 Gene3D G3DSA:3.30.429.10 1 60 9.3E-27 T 14-10-2018 IPR014347 Tautomerase/MIF superfamily GYO_4139 bc6b8fc9f283a0ddaefcb3fea240c123 62 TIGRFAM TIGR00013 taut: 4-oxalocrotonate tautomerase family enzyme 1 62 4.9E-31 T 14-10-2018 IPR018191 4-oxalocrotonate tautomerase, Pseudomonas-type GO:0006725|GO:0016853 GYO_3674 3601f2248ae58ed9a55a6bf3af0005cc 190 SUPERFAMILY SSF46689 3 68 8.48E-15 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 GYO_3674 3601f2248ae58ed9a55a6bf3af0005cc 190 SUPERFAMILY SSF48498 95 183 1.33E-8 T 14-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily GYO_3674 3601f2248ae58ed9a55a6bf3af0005cc 190 Pfam PF00440 Bacterial regulatory proteins, tetR family 5 50 2.0E-13 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 GYO_3674 3601f2248ae58ed9a55a6bf3af0005cc 190 Gene3D G3DSA:1.10.10.60 1 45 2.7E-10 T 14-10-2018 GYO_3674 3601f2248ae58ed9a55a6bf3af0005cc 190 Gene3D G3DSA:1.10.357.10 46 187 2.7E-11 T 14-10-2018 GYO_3674 3601f2248ae58ed9a55a6bf3af0005cc 190 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 5 18 6.3E-7 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 GYO_3674 3601f2248ae58ed9a55a6bf3af0005cc 190 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 25 48 6.3E-7 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 GYO_0723 75271b765daaed00067c316fe161644e 265 SMART SM01130 3 265 1.8E-18 T 14-10-2018 IPR002220 DapA-like GO:0016829 GYO_0723 75271b765daaed00067c316fe161644e 265 Gene3D G3DSA:3.20.20.70 1 265 3.6E-56 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 GYO_0723 75271b765daaed00067c316fe161644e 265 Pfam PF00701 Dihydrodipicolinate synthetase family 4 264 3.3E-42 T 14-10-2018 IPR002220 DapA-like GO:0016829 GYO_0723 75271b765daaed00067c316fe161644e 265 SUPERFAMILY SSF51569 5 264 1.05E-51 T 14-10-2018 GYO_0723 75271b765daaed00067c316fe161644e 265 PIRSF PIRSF001365 1 264 2.7E-43 T 14-10-2018 IPR002220 DapA-like GO:0016829 GYO_0723 75271b765daaed00067c316fe161644e 265 PRINTS PR00146 Dihydrodipicolinate synthase signature 34 55 1.7E-10 T 14-10-2018 IPR002220 DapA-like GO:0016829 GYO_0723 75271b765daaed00067c316fe161644e 265 PRINTS PR00146 Dihydrodipicolinate synthase signature 70 88 1.7E-10 T 14-10-2018 IPR002220 DapA-like GO:0016829 GYO_0723 75271b765daaed00067c316fe161644e 265 PRINTS PR00146 Dihydrodipicolinate synthase signature 127 144 1.7E-10 T 14-10-2018 IPR002220 DapA-like GO:0016829 GYO_2809 14b9659fd5d60c2bb9b0636536514cb6 57 PRINTS PR00976 Ribosomal protein S21 family signature 37 47 1.1E-15 T 14-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 GYO_2809 14b9659fd5d60c2bb9b0636536514cb6 57 PRINTS PR00976 Ribosomal protein S21 family signature 13 22 1.1E-15 T 14-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 GYO_2809 14b9659fd5d60c2bb9b0636536514cb6 57 PRINTS PR00976 Ribosomal protein S21 family signature 25 35 1.1E-15 T 14-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 GYO_2809 14b9659fd5d60c2bb9b0636536514cb6 57 PRINTS PR00976 Ribosomal protein S21 family signature 5 13 1.1E-15 T 14-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 GYO_2809 14b9659fd5d60c2bb9b0636536514cb6 57 ProSitePatterns PS01181 Ribosomal protein S21 signature. 13 25 - T 14-10-2018 IPR018278 Ribosomal protein S21, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 GYO_2809 14b9659fd5d60c2bb9b0636536514cb6 57 ProDom PD005521 RIBOSOMAL S21 RIBONUCLEOPROTEIN 30S S21P A SSU SUBUNIT SEQUENCING DIRECT 16 43 8.0E-9 T 14-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 GYO_2809 14b9659fd5d60c2bb9b0636536514cb6 57 Gene3D G3DSA:1.20.5.1150 16 56 1.7E-18 T 14-10-2018 IPR038380 Ribosomal protein S21 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 GYO_2809 14b9659fd5d60c2bb9b0636536514cb6 57 Pfam PF01165 Ribosomal protein S21 5 57 2.5E-21 T 14-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 GYO_2809 14b9659fd5d60c2bb9b0636536514cb6 57 TIGRFAM TIGR00030 S21p: ribosomal protein bS21 3 56 2.4E-21 T 14-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 GYO_2809 14b9659fd5d60c2bb9b0636536514cb6 57 Hamap MF_00358 30S ribosomal protein S21 [rpsU]. 1 57 21.664 T 14-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 GYO_2436 fff0744432b96dabb4b979d1b30d9284 324 Gene3D G3DSA:3.40.1190.20 3 315 1.7E-85 T 14-10-2018 IPR029056 Ribokinase-like GYO_2436 fff0744432b96dabb4b979d1b30d9284 324 Pfam PF00294 pfkB family carbohydrate kinase 5 303 1.9E-72 T 14-10-2018 IPR011611 Carbohydrate kinase PfkB GYO_2436 fff0744432b96dabb4b979d1b30d9284 324 SUPERFAMILY SSF53613 1 311 1.09E-81 T 14-10-2018 IPR029056 Ribokinase-like GYO_2436 fff0744432b96dabb4b979d1b30d9284 324 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 255 268 - T 14-10-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 GYO_3220 e3d8064db16d3d1f9ccfd843a85dccbd 236 SUPERFAMILY SSF103088 117 234 1.44E-28 T 14-10-2018 IPR036737 OmpA-like domain superfamily GYO_3220 e3d8064db16d3d1f9ccfd843a85dccbd 236 Pfam PF13677 Membrane MotB of proton-channel complex MotA/MotB 14 62 1.3E-18 T 14-10-2018 IPR025713 Motility protein B, N-terminal domain GYO_3220 e3d8064db16d3d1f9ccfd843a85dccbd 236 Pfam PF00691 OmpA family 129 228 6.1E-21 T 14-10-2018 IPR006665 OmpA-like domain GYO_3220 e3d8064db16d3d1f9ccfd843a85dccbd 236 Gene3D G3DSA:3.30.1330.60 79 236 4.1E-47 T 14-10-2018 IPR036737 OmpA-like domain superfamily GYO_4431 81d528a01daafa02ee3a64474b6b83da 159 TIGRFAM TIGR00246 tRNA_RlmH_YbeA: rRNA large subunit m3Psi methyltransferase RlmH 1 159 1.4E-80 T 14-10-2018 IPR003742 RNA methyltransferase RlmH GO:0005737|GO:0006364|GO:0008168 GYO_4431 81d528a01daafa02ee3a64474b6b83da 159 PIRSF PIRSF004505 1 159 7.7E-54 T 14-10-2018 IPR003742 RNA methyltransferase RlmH GO:0005737|GO:0006364|GO:0008168 GYO_4431 81d528a01daafa02ee3a64474b6b83da 159 SUPERFAMILY SSF75217 2 157 1.57E-64 T 14-10-2018 IPR029028 Alpha/beta knot methyltransferases GYO_4431 81d528a01daafa02ee3a64474b6b83da 159 Hamap MF_00658 Ribosomal RNA large subunit methyltransferase H [rlmH]. 1 159 30.859 T 14-10-2018 IPR003742 RNA methyltransferase RlmH GO:0005737|GO:0006364|GO:0008168 GYO_4431 81d528a01daafa02ee3a64474b6b83da 159 Gene3D G3DSA:3.40.1280.10 1 159 1.2E-70 T 14-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal GYO_4431 81d528a01daafa02ee3a64474b6b83da 159 Pfam PF02590 Predicted SPOUT methyltransferase 2 158 6.0E-60 T 14-10-2018 IPR003742 RNA methyltransferase RlmH GO:0005737|GO:0006364|GO:0008168 GYO_1106 a20adc301201cb0fba11869cf48f55c2 362 Pfam PF01757 Acyltransferase family 8 327 7.1E-20 T 14-10-2018 IPR002656 Acyltransferase 3 GO:0016747 GYO_0664 7865e35e0acdd8b04d48ca9f552d035e 535 SUPERFAMILY SSF55785 216 304 2.24E-5 T 14-10-2018 IPR035965 PAS domain superfamily GYO_0664 7865e35e0acdd8b04d48ca9f552d035e 535 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 422 526 8.3E-17 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase GYO_0664 7865e35e0acdd8b04d48ca9f552d035e 535 PRINTS PR00344 Bacterial sensor protein C-terminal signature 458 472 9.2E-11 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 GYO_0664 7865e35e0acdd8b04d48ca9f552d035e 535 PRINTS PR00344 Bacterial sensor protein C-terminal signature 488 506 9.2E-11 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 GYO_0664 7865e35e0acdd8b04d48ca9f552d035e 535 PRINTS PR00344 Bacterial sensor protein C-terminal signature 512 525 9.2E-11 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 GYO_0664 7865e35e0acdd8b04d48ca9f552d035e 535 SMART SM00387 417 528 6.3E-23 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase GYO_0664 7865e35e0acdd8b04d48ca9f552d035e 535 Gene3D G3DSA:3.30.450.20 200 312 1.8E-22 T 14-10-2018 GYO_0664 7865e35e0acdd8b04d48ca9f552d035e 535 SUPERFAMILY SSF55890 320 376 4.58E-12 T 14-10-2018 IPR016120 Signal transduction histidine kinase, sporulation regulator SpoOB GO:0000155|GO:0000160|GO:0016772 GYO_0664 7865e35e0acdd8b04d48ca9f552d035e 535 Gene3D G3DSA:3.30.565.10 381 534 1.3E-26 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily GYO_0664 7865e35e0acdd8b04d48ca9f552d035e 535 SUPERFAMILY SSF103190 40 169 7.06E-32 T 14-10-2018 IPR029151 Periplasmic sensor-like domain superfamily GYO_0664 7865e35e0acdd8b04d48ca9f552d035e 535 SUPERFAMILY SSF55874 396 525 7.07E-27 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily GYO_0664 7865e35e0acdd8b04d48ca9f552d035e 535 Gene3D G3DSA:3.30.450.20 32 180 2.7E-36 T 14-10-2018 GYO_0664 7865e35e0acdd8b04d48ca9f552d035e 535 SMART SM00091 213 278 1.9E-4 T 14-10-2018 IPR000014 PAS domain GYO_0664 7865e35e0acdd8b04d48ca9f552d035e 535 Pfam PF17203 Single cache domain 3 40 166 1.1E-19 T 14-10-2018 IPR033463 Single cache domain 3 GYO_0664 7865e35e0acdd8b04d48ca9f552d035e 535 Pfam PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain 319 374 2.3E-10 T 14-10-2018 IPR039506 SpoOB, alpha-helical domain GYO_1551 178907a1095b6d8170b3b53222beeaed 423 Gene3D G3DSA:3.40.50.300 186 337 3.9E-38 T 14-10-2018 GYO_1551 178907a1095b6d8170b3b53222beeaed 423 SUPERFAMILY SSF52540 180 386 1.54E-38 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase GYO_1551 178907a1095b6d8170b3b53222beeaed 423 Gene3D G3DSA:1.10.8.60 338 393 3.9E-38 T 14-10-2018 GYO_1551 178907a1095b6d8170b3b53222beeaed 423 SMART SM00382 219 339 1.6E-12 T 14-10-2018 IPR003593 AAA+ ATPase domain GYO_1551 178907a1095b6d8170b3b53222beeaed 423 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 223 336 7.5E-24 T 14-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 GYO_1934 40a7e05364313e5163f3d6f80de22353 553 SMART SM01121 239 553 4.3E-190 T 14-10-2018 IPR033470 Uncharacterised protein, DhaK domain GYO_1934 40a7e05364313e5163f3d6f80de22353 553 Pfam PF13684 Dihydroxyacetone kinase family 239 553 1.1E-126 T 14-10-2018 IPR033470 Uncharacterised protein, DhaK domain GYO_1934 40a7e05364313e5163f3d6f80de22353 553 Pfam PF02734 DAK2 domain 36 200 7.7E-41 T 14-10-2018 IPR004007 DhaL domain GO:0004371|GO:0006071 Reactome: R-HSA-168928|Reactome: R-HSA-70350 GYO_1934 40a7e05364313e5163f3d6f80de22353 553 TIGRFAM TIGR03599 YloV: DAK2 domain fusion protein YloV 11 553 1.7E-217 T 14-10-2018 IPR019986 DAK2 domain-containing protein YloV GYO_1934 40a7e05364313e5163f3d6f80de22353 553 Gene3D G3DSA:1.25.40.340 5 179 4.3E-11 T 14-10-2018 IPR036117 DhaL domain superfamily GO:0004371|GO:0006071 Reactome: R-HSA-168928|Reactome: R-HSA-70350 GYO_1934 40a7e05364313e5163f3d6f80de22353 553 SUPERFAMILY SSF101473 3 201 4.32E-45 T 14-10-2018 IPR036117 DhaL domain superfamily GO:0004371|GO:0006071 Reactome: R-HSA-168928|Reactome: R-HSA-70350 GYO_1934 40a7e05364313e5163f3d6f80de22353 553 SMART SM01120 36 201 7.4E-70 T 14-10-2018 IPR004007 DhaL domain GO:0004371|GO:0006071 Reactome: R-HSA-168928|Reactome: R-HSA-70350 GYO_4295 fecf361aee0352d03c632a93ca5b0690 410 SUPERFAMILY SSF53187 3 405 5.76E-83 T 14-10-2018 GYO_4295 fecf361aee0352d03c632a93ca5b0690 410 Gene3D G3DSA:3.40.630.10 5 402 2.3E-186 T 14-10-2018 GYO_4295 fecf361aee0352d03c632a93ca5b0690 410 Gene3D G3DSA:3.30.70.360 211 321 2.3E-186 T 14-10-2018 GYO_4295 fecf361aee0352d03c632a93ca5b0690 410 SUPERFAMILY SSF55031 211 322 2.93E-41 T 14-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain GYO_4295 fecf361aee0352d03c632a93ca5b0690 410 Pfam PF07687 Peptidase dimerisation domain 209 311 6.8E-12 T 14-10-2018 IPR011650 Peptidase M20, dimerisation domain GYO_4295 fecf361aee0352d03c632a93ca5b0690 410 ProSitePatterns PS00758 ArgE / dapE / ACY1 / CPG2 / yscS family signature 1. 74 83 - T 14-10-2018 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 GYO_4295 fecf361aee0352d03c632a93ca5b0690 410 Pfam PF01546 Peptidase family M20/M25/M40 141 403 2.0E-13 T 14-10-2018 IPR002933 Peptidase M20 GO:0016787 GYO_4295 fecf361aee0352d03c632a93ca5b0690 410 ProSitePatterns PS00759 ArgE / dapE / ACY1 / CPG2 / yscS family signature 2. 140 179 - T 14-10-2018 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 GYO_4295 fecf361aee0352d03c632a93ca5b0690 410 TIGRFAM TIGR01882 peptidase-T: peptidase T 3 410 2.7E-232 T 14-10-2018 IPR010161 Peptidase M20B, tripeptide aminopeptidase GO:0005737|GO:0006518|GO:0008270|GO:0045148 GYO_4295 fecf361aee0352d03c632a93ca5b0690 410 PIRSF PIRSF037215 1 410 5.3E-197 T 14-10-2018 IPR010161 Peptidase M20B, tripeptide aminopeptidase GO:0005737|GO:0006518|GO:0008270|GO:0045148 GYO_4295 fecf361aee0352d03c632a93ca5b0690 410 Hamap MF_00550 Peptidase T [pepT]. 2 406 60.314 T 14-10-2018 IPR010161 Peptidase M20B, tripeptide aminopeptidase GO:0005737|GO:0006518|GO:0008270|GO:0045148 GYO_1967 3c01ff959859f1f0ca63379991f32837 435 Pfam PF01134 Glucose inhibited division protein A 6 367 2.4E-117 T 14-10-2018 IPR002218 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG-related GO:0008033|GO:0050660 Reactome: R-HSA-6787450 GYO_1967 3c01ff959859f1f0ca63379991f32837 435 SUPERFAMILY SSF51905 4 367 1.4E-26 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily GYO_1967 3c01ff959859f1f0ca63379991f32837 435 TIGRFAM TIGR00137 gid_trmFO: tRNA:m(5)U-54 methyltransferase 4 435 1.5E-253 T 14-10-2018 IPR004417 Methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase TrmFO GO:0005737|GO:0008033|GO:0047151|GO:0050660 GYO_1967 3c01ff959859f1f0ca63379991f32837 435 Hamap MF_01037 Methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase TrmFO [trmFO]. 6 434 36.763 T 14-10-2018 IPR004417 Methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase TrmFO GO:0005737|GO:0008033|GO:0047151|GO:0050660 GYO_1967 3c01ff959859f1f0ca63379991f32837 435 Gene3D G3DSA:3.50.50.60 3 178 5.2E-59 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily GYO_1967 3c01ff959859f1f0ca63379991f32837 435 Gene3D G3DSA:3.50.50.60 291 435 1.7E-53 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily GYO_1967 3c01ff959859f1f0ca63379991f32837 435 ProSitePatterns PS01281 Glucose inhibited division protein A family signature 2. 337 360 - T 14-10-2018 IPR020595 MnmG-related, conserved site Reactome: R-HSA-6787450 GYO_4065 bc2795a8769012fab8457977cfbaa545 415 PIRSF PIRSF000412 1 414 4.0E-172 T 14-10-2018 IPR001085 Serine hydroxymethyltransferase GO:0004372|GO:0019264|GO:0030170|GO:0035999 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 GYO_4065 bc2795a8769012fab8457977cfbaa545 415 Gene3D G3DSA:3.90.1150.10 7 388 8.1E-188 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 GYO_4065 bc2795a8769012fab8457977cfbaa545 415 SUPERFAMILY SSF53383 2 411 3.03E-182 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase GYO_4065 bc2795a8769012fab8457977cfbaa545 415 ProSitePatterns PS00096 Serine hydroxymethyltransferase pyridoxal-phosphate attachment site. 218 234 - T 14-10-2018 IPR019798 Serine hydroxymethyltransferase, pyridoxal phosphate binding site GO:0030170 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 GYO_4065 bc2795a8769012fab8457977cfbaa545 415 Hamap MF_00051 Serine hydroxymethyltransferase [glyA]. 3 411 53.433 T 14-10-2018 IPR001085 Serine hydroxymethyltransferase GO:0004372|GO:0019264|GO:0030170|GO:0035999 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 GYO_4065 bc2795a8769012fab8457977cfbaa545 415 Pfam PF00464 Serine hydroxymethyltransferase 6 380 2.4E-186 T 14-10-2018 IPR039429 Serine hydroxymethyltransferase-like domain KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 GYO_4065 bc2795a8769012fab8457977cfbaa545 415 Gene3D G3DSA:3.40.640.10 33 283 8.1E-188 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 GYO_4251 87cd89d23489605455b448652e58558e 504 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 29 429 7.5E-104 T 14-10-2018 IPR010071 Amino acid adenylation domain GYO_4251 87cd89d23489605455b448652e58558e 504 TIGRFAM TIGR01734 D-ala-DACP-lig: D-alanine--poly(phosphoribitol) ligase, subunit 1 3 502 5.8E-246 T 14-10-2018 IPR010072 D-alanine--D-alanyl carrier protein ligase GO:0005524|GO:0047473|GO:0070395 GYO_4251 87cd89d23489605455b448652e58558e 504 ProSitePatterns PS00455 Putative AMP-binding domain signature. 149 160 - T 14-10-2018 IPR020845 AMP-binding, conserved site GYO_4251 87cd89d23489605455b448652e58558e 504 Pfam PF13193 AMP-binding enzyme C-terminal domain 413 492 4.2E-7 T 14-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain GYO_4251 87cd89d23489605455b448652e58558e 504 Pfam PF00501 AMP-binding enzyme 9 404 1.5E-91 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 GYO_4251 87cd89d23489605455b448652e58558e 504 Gene3D G3DSA:3.30.300.30 399 503 1.1E-30 T 14-10-2018 GYO_4251 87cd89d23489605455b448652e58558e 504 Gene3D G3DSA:3.40.50.12780 2 398 1.2E-153 T 14-10-2018 GYO_4251 87cd89d23489605455b448652e58558e 504 SUPERFAMILY SSF56801 4 500 2.35E-123 T 14-10-2018 GYO_4251 87cd89d23489605455b448652e58558e 504 Hamap MF_00593 D-alanine--D-alanyl carrier protein ligase [dltA]. 1 504 244.852 T 14-10-2018 IPR010072 D-alanine--D-alanyl carrier protein ligase GO:0005524|GO:0047473|GO:0070395 GYO_1008 813e6c23d18ec9bea0420d401894da20 376 Pfam PF00270 DEAD/DEAH box helicase 28 193 1.5E-44 T 14-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 GYO_1008 813e6c23d18ec9bea0420d401894da20 376 SMART SM00487 23 220 5.7E-53 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain GYO_1008 813e6c23d18ec9bea0420d401894da20 376 Pfam PF00271 Helicase conserved C-terminal domain 229 335 6.3E-22 T 14-10-2018 IPR001650 Helicase, C-terminal GYO_1008 813e6c23d18ec9bea0420d401894da20 376 Gene3D G3DSA:3.40.50.300 213 370 1.1E-35 T 14-10-2018 GYO_1008 813e6c23d18ec9bea0420d401894da20 376 SUPERFAMILY SSF52540 72 353 1.36E-56 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase GYO_1008 813e6c23d18ec9bea0420d401894da20 376 SMART SM00490 255 335 1.1E-21 T 14-10-2018 IPR001650 Helicase, C-terminal GYO_1008 813e6c23d18ec9bea0420d401894da20 376 Gene3D G3DSA:3.40.50.300 6 208 1.0E-62 T 14-10-2018 GYO_1835 3c2e86467f2ddd7bdec872573cfcd461 207 Pfam PF00510 Cytochrome c oxidase subunit III 28 204 1.7E-17 T 14-10-2018 IPR000298 Cytochrome c oxidase subunit III-like GO:0015002|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 GYO_1835 3c2e86467f2ddd7bdec872573cfcd461 207 Gene3D G3DSA:1.20.120.80 21 206 4.1E-50 T 14-10-2018 IPR013833 Cytochrome c oxidase, subunit III, 4-helical bundle GO:0004129|GO:0016020|GO:0022904 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 GYO_1835 3c2e86467f2ddd7bdec872573cfcd461 207 SUPERFAMILY SSF81452 22 204 7.46E-54 T 14-10-2018 IPR035973 Cytochrome c oxidase subunit III-like superfamily GO:0015002|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 GYO_0785 edbe1fbe9c36ce4881611307cb83b147 270 Gene3D G3DSA:1.10.1660.10 3 126 8.3E-27 T 14-10-2018 GYO_0785 edbe1fbe9c36ce4881611307cb83b147 270 SUPERFAMILY SSF55136 127 269 1.6E-18 T 14-10-2018 IPR011256 Regulatory factor, effector binding domain superfamily GYO_0785 edbe1fbe9c36ce4881611307cb83b147 270 Gene3D G3DSA:3.20.80.10 127 270 3.9E-8 T 14-10-2018 IPR011256 Regulatory factor, effector binding domain superfamily GYO_0785 edbe1fbe9c36ce4881611307cb83b147 270 SMART SM00871 121 270 8.2E-13 T 14-10-2018 IPR010499 Bacterial transcription activator, effector binding GYO_0785 edbe1fbe9c36ce4881611307cb83b147 270 Pfam PF13411 MerR HTH family regulatory protein 5 66 4.5E-16 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 GYO_0785 edbe1fbe9c36ce4881611307cb83b147 270 Pfam PF06445 GyrI-like small molecule binding domain 123 270 2.9E-15 T 14-10-2018 IPR029442 GyrI-like small molecule binding domain GYO_0785 edbe1fbe9c36ce4881611307cb83b147 270 SUPERFAMILY SSF46955 4 107 5.13E-26 T 14-10-2018 IPR009061 Putative DNA-binding domain superfamily GYO_0785 edbe1fbe9c36ce4881611307cb83b147 270 SMART SM00422 5 75 6.1E-16 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 GYO_3432 be03521ab7ed62993a87108da335ac3d 387 Pfam PF00155 Aminotransferase class I and II 42 382 5.2E-39 T 14-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 GYO_3432 be03521ab7ed62993a87108da335ac3d 387 TIGRFAM TIGR04350 C_S_lyase_PatB: putative C-S lyase 3 386 2.0E-149 T 14-10-2018 IPR027619 Putative C-S lyase KEGG: 00270+4.4.1.8|KEGG: 00450+4.4.1.8 GYO_3432 be03521ab7ed62993a87108da335ac3d 387 SUPERFAMILY SSF53383 2 386 2.89E-97 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase GYO_3432 be03521ab7ed62993a87108da335ac3d 387 Gene3D G3DSA:3.90.1150.10 11 382 1.9E-149 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 GYO_3432 be03521ab7ed62993a87108da335ac3d 387 Gene3D G3DSA:3.40.640.10 66 290 1.9E-149 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 GYO_0372 c80099e19704504bea3b079f840fb2ca 273 SUPERFAMILY SSF143597 40 240 6.15E-73 T 14-10-2018 IPR036888 DNA integrity scanning protein, DisA, N-terminal domain superfamily GYO_0372 c80099e19704504bea3b079f840fb2ca 273 Hamap MF_01499 Diadenylate cyclase [dacA]. 1 254 34.788 T 14-10-2018 IPR034701 Diadenylate cyclase CdaA GO:0004016|GO:0006171 GYO_0372 c80099e19704504bea3b079f840fb2ca 273 PIRSF PIRSF004793 2 268 1.3E-99 T 14-10-2018 IPR014046 Diadenylate cyclase GO:0004016|GO:0006171 GYO_0372 c80099e19704504bea3b079f840fb2ca 273 Pfam PF02457 DisA bacterial checkpoint controller nucleotide-binding 118 235 3.9E-44 T 14-10-2018 IPR003390 DNA integrity scanning protein, DisA, N-terminal GYO_0372 c80099e19704504bea3b079f840fb2ca 273 TIGRFAM TIGR00159 TIGR00159: TIGR00159 family protein 3 257 1.1E-116 T 14-10-2018 IPR034701 Diadenylate cyclase CdaA GO:0004016|GO:0006171 GYO_0372 c80099e19704504bea3b079f840fb2ca 273 Gene3D G3DSA:3.40.1700.10 101 254 7.1E-64 T 14-10-2018 IPR036888 DNA integrity scanning protein, DisA, N-terminal domain superfamily GYO_3101 17fb95ff25e4b6b77369702e87fcdd08 258 Gene3D G3DSA:3.90.226.10 1 258 1.1E-88 T 14-10-2018 GYO_3101 17fb95ff25e4b6b77369702e87fcdd08 258 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 98 118 - T 14-10-2018 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824 GYO_3101 17fb95ff25e4b6b77369702e87fcdd08 258 Pfam PF00378 Enoyl-CoA hydratase/isomerase 11 257 7.7E-64 T 14-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 GYO_3101 17fb95ff25e4b6b77369702e87fcdd08 258 SUPERFAMILY SSF52096 2 258 6.26E-82 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily GYO_1729 bf49177a1a6d71a2210dd7e51c676346 655 SUPERFAMILY SSF103190 96 192 2.35E-10 T 14-10-2018 IPR029151 Periplasmic sensor-like domain superfamily GYO_1729 bf49177a1a6d71a2210dd7e51c676346 655 Pfam PF00672 HAMP domain 299 345 2.1E-9 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 GYO_1729 bf49177a1a6d71a2210dd7e51c676346 655 Pfam PF02743 Cache domain 41 259 7.0E-30 T 14-10-2018 IPR033479 Double Cache domain 1 GYO_1729 bf49177a1a6d71a2210dd7e51c676346 655 SMART SM00304 298 350 3.6E-13 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 GYO_1729 bf49177a1a6d71a2210dd7e51c676346 655 Gene3D G3DSA:1.20.1480.50 271 355 4.1E-15 T 14-10-2018 GYO_1729 bf49177a1a6d71a2210dd7e51c676346 655 Gene3D G3DSA:3.30.450.20 99 182 1.2E-37 T 14-10-2018 GYO_1729 bf49177a1a6d71a2210dd7e51c676346 655 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 448 606 9.6E-34 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 GYO_1729 bf49177a1a6d71a2210dd7e51c676346 655 SMART SM00283 379 640 4.3E-86 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 GYO_1729 bf49177a1a6d71a2210dd7e51c676346 655 SUPERFAMILY SSF58104 318 653 6.15E-66 T 14-10-2018 GYO_1729 bf49177a1a6d71a2210dd7e51c676346 655 Gene3D G3DSA:3.30.450.20 183 267 1.2E-37 T 14-10-2018 GYO_1729 bf49177a1a6d71a2210dd7e51c676346 655 Gene3D G3DSA:1.10.287.950 356 654 2.1E-61 T 14-10-2018 GYO_0695 e8c03da307ef1ef38b90a84bb24e7ca7 199 SUPERFAMILY SSF81606 14 195 5.1E-14 T 14-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 GYO_0695 e8c03da307ef1ef38b90a84bb24e7ca7 199 SMART SM00331 9 198 7.5E-50 T 14-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 GYO_0695 e8c03da307ef1ef38b90a84bb24e7ca7 199 Pfam PF07228 Stage II sporulation protein E (SpoIIE) 35 159 5.4E-13 T 14-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 GYO_0695 e8c03da307ef1ef38b90a84bb24e7ca7 199 SMART SM00332 6 196 2.1E-5 T 14-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 GYO_0695 e8c03da307ef1ef38b90a84bb24e7ca7 199 Gene3D G3DSA:3.60.40.10 1 199 1.0E-48 T 14-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 GYO_2673 dfd3f9e0d48ab7546f09b09d40fda869 1061 Gene3D G3DSA:3.90.1570.50 102 293 6.1E-23 T 14-10-2018 GYO_2673 dfd3f9e0d48ab7546f09b09d40fda869 1061 Pfam PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) 21 235 1.7E-38 T 14-10-2018 IPR007409 Restriction endonuclease, type I, HsdR, N-terminal GO:0003677|GO:0004519|GO:0006304 GYO_2673 dfd3f9e0d48ab7546f09b09d40fda869 1061 Gene3D G3DSA:3.40.50.300 300 487 1.0E-44 T 14-10-2018 GYO_2673 dfd3f9e0d48ab7546f09b09d40fda869 1061 SMART SM00487 302 499 2.8E-10 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain GYO_2673 dfd3f9e0d48ab7546f09b09d40fda869 1061 SUPERFAMILY SSF52540 431 791 4.43E-8 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase GYO_2673 dfd3f9e0d48ab7546f09b09d40fda869 1061 SUPERFAMILY SSF52540 261 495 4.18E-26 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase GYO_2673 dfd3f9e0d48ab7546f09b09d40fda869 1061 Pfam PF11867 Domain of unknown function (DUF3387) 739 1001 2.3E-7 T 14-10-2018 IPR021810 Protein of unknown function DUF3387 GYO_2673 dfd3f9e0d48ab7546f09b09d40fda869 1061 Pfam PF04851 Type III restriction enzyme, res subunit 302 473 2.0E-18 T 14-10-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 GYO_2673 dfd3f9e0d48ab7546f09b09d40fda869 1061 Gene3D G3DSA:3.40.50.300 489 746 3.5E-28 T 14-10-2018 GYO_2673 dfd3f9e0d48ab7546f09b09d40fda869 1061 TIGRFAM TIGR00348 hsdR: type I site-specific deoxyribonuclease, HsdR family 24 740 1.0E-140 T 14-10-2018 IPR004473 Restriction endonuclease, type I, HsdR GO:0003677|GO:0005524|GO:0009035|GO:0009307 GYO_0725 eea03adba0a7a5e8d371ec0d77073462 296 Gene3D G3DSA:1.10.10.10 1 90 3.9E-28 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily GYO_0725 eea03adba0a7a5e8d371ec0d77073462 296 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 61 2.3E-21 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 GYO_0725 eea03adba0a7a5e8d371ec0d77073462 296 Pfam PF03466 LysR substrate binding domain 88 291 8.3E-44 T 14-10-2018 IPR005119 LysR, substrate-binding GYO_0725 eea03adba0a7a5e8d371ec0d77073462 296 SUPERFAMILY SSF53850 90 292 1.93E-41 T 14-10-2018 GYO_0725 eea03adba0a7a5e8d371ec0d77073462 296 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 1.6E-10 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 GYO_0725 eea03adba0a7a5e8d371ec0d77073462 296 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 1.6E-10 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 GYO_0725 eea03adba0a7a5e8d371ec0d77073462 296 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 1.6E-10 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 GYO_0725 eea03adba0a7a5e8d371ec0d77073462 296 SUPERFAMILY SSF46785 1 86 9.09E-23 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily GYO_0725 eea03adba0a7a5e8d371ec0d77073462 296 Gene3D G3DSA:3.40.190.290 91 295 9.6E-53 T 14-10-2018 GYO_1868 2200c718407f2a7416ccc298e439c069 363 Gene3D G3DSA:3.40.50.2000 164 346 7.5E-110 T 14-10-2018 GYO_1868 2200c718407f2a7416ccc298e439c069 363 Gene3D G3DSA:3.40.50.2000 5 352 7.5E-110 T 14-10-2018 GYO_1868 2200c718407f2a7416ccc298e439c069 363 Pfam PF03033 Glycosyltransferase family 28 N-terminal domain 3 143 1.5E-50 T 14-10-2018 IPR004276 Glycosyltransferase family 28, N-terminal domain GO:0005975|GO:0016758|GO:0030259 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 GYO_1868 2200c718407f2a7416ccc298e439c069 363 TIGRFAM TIGR01133 murG: undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase 1 358 2.4E-113 T 14-10-2018 IPR006009 N-acetylglucosaminyltransferase, MurG GO:0050511 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 GYO_1868 2200c718407f2a7416ccc298e439c069 363 Hamap MF_00033 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [murG]. 3 362 33.58 T 14-10-2018 IPR006009 N-acetylglucosaminyltransferase, MurG GO:0050511 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 GYO_1868 2200c718407f2a7416ccc298e439c069 363 SUPERFAMILY SSF53756 1 361 4.61E-109 T 14-10-2018 GYO_1868 2200c718407f2a7416ccc298e439c069 363 Pfam PF04101 Glycosyltransferase family 28 C-terminal domain 188 353 3.4E-44 T 14-10-2018 IPR007235 Glycosyl transferase, family 28, C-terminal GO:0016758 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|Reactome: R-HSA-446193|Reactome: R-HSA-5633231 GYO_2299 fddc771f75708b25acaa3a470e18ad9b 161 Pfam PF09346 SMI1 / KNR4 family (SUKH-1) 22 135 8.7E-9 T 14-10-2018 IPR018958 Knr4/Smi1-like domain GYO_2299 fddc771f75708b25acaa3a470e18ad9b 161 SUPERFAMILY SSF160631 20 151 9.42E-16 T 14-10-2018 GYO_2299 fddc771f75708b25acaa3a470e18ad9b 161 SMART SM00860 19 137 2.9E-5 T 14-10-2018 IPR018958 Knr4/Smi1-like domain GYO_2299 fddc771f75708b25acaa3a470e18ad9b 161 Gene3D G3DSA:3.40.1580.10 15 147 1.3E-12 T 14-10-2018 IPR037883 Knr4/Smi1-like domain superfamily GYO_0935 ab494ff5f6c61a70b348e87c7b3f88c9 303 SUPERFAMILY SSF111331 1 296 3.4E-87 T 14-10-2018 IPR016064 NAD kinase/diacylglycerol kinase-like domain superfamily GYO_0935 ab494ff5f6c61a70b348e87c7b3f88c9 303 TIGRFAM TIGR00147 TIGR00147: lipid kinase, YegS/Rv2252/BmrU family 1 295 1.7E-135 T 14-10-2018 IPR005218 Diacylglycerol/lipid kinase GYO_0935 ab494ff5f6c61a70b348e87c7b3f88c9 303 SMART SM00046 3 131 4.4E-6 T 14-10-2018 IPR001206 Diacylglycerol kinase, catalytic domain GO:0016301 GYO_0935 ab494ff5f6c61a70b348e87c7b3f88c9 303 Pfam PF00781 Diacylglycerol kinase catalytic domain 4 128 9.2E-38 T 14-10-2018 IPR001206 Diacylglycerol kinase, catalytic domain GO:0016301 GYO_0935 ab494ff5f6c61a70b348e87c7b3f88c9 303 Gene3D G3DSA:2.60.200.40 126 279 2.4E-91 T 14-10-2018 GYO_0935 ab494ff5f6c61a70b348e87c7b3f88c9 303 Gene3D G3DSA:3.40.50.10330 6 125 2.4E-91 T 14-10-2018 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, N-terminal GO:0003951 GYO_4061 b6963ad52c5360a9a725016ca58df5b7 70 PRINTS PR00124 ATP synthase C subunit signature 43 68 5.6E-20 T 14-10-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 GYO_4061 b6963ad52c5360a9a725016ca58df5b7 70 PRINTS PR00124 ATP synthase C subunit signature 5 24 5.6E-20 T 14-10-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 GYO_4061 b6963ad52c5360a9a725016ca58df5b7 70 PRINTS PR00124 ATP synthase C subunit signature 26 41 5.6E-20 T 14-10-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 GYO_4061 b6963ad52c5360a9a725016ca58df5b7 70 Pfam PF00137 ATP synthase subunit C 4 66 9.4E-15 T 14-10-2018 IPR002379 V-ATPase proteolipid subunit C-like domain GO:0015078|GO:0015991|GO:0033177 GYO_4061 b6963ad52c5360a9a725016ca58df5b7 70 SUPERFAMILY SSF81333 3 69 1.83E-19 T 14-10-2018 IPR035921 F/V-ATP synthase subunit C superfamily GYO_4061 b6963ad52c5360a9a725016ca58df5b7 70 ProSitePatterns PS00605 ATP synthase c subunit signature. 33 54 - T 14-10-2018 IPR020537 ATP synthase, F0 complex, subunit C, DCCD-binding site Reactome: R-HSA-163210|Reactome: R-HSA-8949613 GYO_4061 b6963ad52c5360a9a725016ca58df5b7 70 TIGRFAM TIGR01260 ATP_synt_c: ATP synthase F0, C subunit 14 69 1.0E-20 T 14-10-2018 IPR005953 ATP synthase, F0 complex, subunit C, bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 GYO_4061 b6963ad52c5360a9a725016ca58df5b7 70 Hamap MF_01396 ATP synthase subunit c [atpH]. 3 68 15.863 T 14-10-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 GYO_4061 b6963ad52c5360a9a725016ca58df5b7 70 Gene3D G3DSA:1.20.20.10 1 68 1.6E-27 T 14-10-2018 IPR038662 F1F0 ATP synthase subunit C superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 GYO_2835 bfbd11ed9bd05f9395dc654e507f6449 96 SMART SM01103 2 85 1.0E-44 T 14-10-2018 IPR001890 RNA-binding, CRM domain GO:0003723 GYO_2835 bfbd11ed9bd05f9395dc654e507f6449 96 TIGRFAM TIGR00253 RNA_bind_YhbY: putative RNA-binding protein, YhbY family 2 96 6.1E-47 T 14-10-2018 IPR017924 RNA-binding protein YhbY GO:0003723 GYO_2835 bfbd11ed9bd05f9395dc654e507f6449 96 SUPERFAMILY SSF75471 1 94 4.32E-32 T 14-10-2018 IPR035920 YhbY-like superfamily GYO_2835 bfbd11ed9bd05f9395dc654e507f6449 96 Gene3D G3DSA:3.30.110.60 1 96 3.8E-39 T 14-10-2018 IPR035920 YhbY-like superfamily GYO_2835 bfbd11ed9bd05f9395dc654e507f6449 96 ProDom PD010559 RNA-BINDING YHBY UPF0044 PREDICTED RNA RIBOSOMAL CONTAINING KH BINDING DOMAIN 8 96 7.0E-46 T 14-10-2018 IPR001890 RNA-binding, CRM domain GO:0003723 GYO_2835 bfbd11ed9bd05f9395dc654e507f6449 96 Pfam PF01985 CRS1 / YhbY (CRM) domain 2 85 2.1E-23 T 14-10-2018 IPR001890 RNA-binding, CRM domain GO:0003723 GYO_2306 4b357588c05fd99c7992fbbcf20f22f8 191 Gene3D G3DSA:1.10.357.10 51 184 2.1E-27 T 14-10-2018 GYO_2306 4b357588c05fd99c7992fbbcf20f22f8 191 SUPERFAMILY SSF48498 79 183 1.96E-18 T 14-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily GYO_2306 4b357588c05fd99c7992fbbcf20f22f8 191 Gene3D G3DSA:1.10.10.60 1 50 1.6E-22 T 14-10-2018 GYO_2306 4b357588c05fd99c7992fbbcf20f22f8 191 Pfam PF00440 Bacterial regulatory proteins, tetR family 12 47 3.2E-5 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 GYO_2306 4b357588c05fd99c7992fbbcf20f22f8 191 SUPERFAMILY SSF46689 7 72 1.23E-10 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 GYO_2306 4b357588c05fd99c7992fbbcf20f22f8 191 Pfam PF13305 WHG domain 86 160 9.3E-13 T 14-10-2018 IPR025996 WHG domain GYO_4444 13ab59cff268c24ef9141d5267aa4276 462 Pfam PF02954 Bacterial regulatory protein, Fis family 415 455 4.2E-15 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 GYO_4444 13ab59cff268c24ef9141d5267aa4276 462 SUPERFAMILY SSF55785 14 115 1.9E-9 T 14-10-2018 IPR035965 PAS domain superfamily GYO_4444 13ab59cff268c24ef9141d5267aa4276 462 SUPERFAMILY SSF52540 143 385 3.73E-64 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase GYO_4444 13ab59cff268c24ef9141d5267aa4276 462 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 438 458 1.5E-7 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 GYO_4444 13ab59cff268c24ef9141d5267aa4276 462 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 421 438 1.5E-7 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 GYO_4444 13ab59cff268c24ef9141d5267aa4276 462 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 355 364 - T 14-10-2018 IPR025944 Sigma-54 interaction domain, conserved site GYO_4444 13ab59cff268c24ef9141d5267aa4276 462 SMART SM00382 163 305 3.6E-12 T 14-10-2018 IPR003593 AAA+ ATPase domain GYO_4444 13ab59cff268c24ef9141d5267aa4276 462 Gene3D G3DSA:1.10.10.60 394 458 3.8E-16 T 14-10-2018 GYO_4444 13ab59cff268c24ef9141d5267aa4276 462 SUPERFAMILY SSF46689 355 455 2.51E-14 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 GYO_4444 13ab59cff268c24ef9141d5267aa4276 462 Gene3D G3DSA:3.40.50.300 128 312 1.2E-61 T 14-10-2018 GYO_4444 13ab59cff268c24ef9141d5267aa4276 462 Gene3D G3DSA:3.30.450.20 8 120 5.9E-12 T 14-10-2018 GYO_4444 13ab59cff268c24ef9141d5267aa4276 462 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 12 125 1.1E-8 T 14-10-2018 IPR000014 PAS domain GYO_4444 13ab59cff268c24ef9141d5267aa4276 462 SMART SM00091 10 75 0.0093 T 14-10-2018 IPR000014 PAS domain GYO_4444 13ab59cff268c24ef9141d5267aa4276 462 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 167 180 - T 14-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 GYO_4444 13ab59cff268c24ef9141d5267aa4276 462 Pfam PF13426 PAS domain 22 121 9.6E-8 T 14-10-2018 IPR000014 PAS domain GYO_4444 13ab59cff268c24ef9141d5267aa4276 462 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 228 243 - T 14-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 GYO_4444 13ab59cff268c24ef9141d5267aa4276 462 Gene3D G3DSA:1.10.8.60 313 380 3.1E-22 T 14-10-2018 GYO_4444 13ab59cff268c24ef9141d5267aa4276 462 Pfam PF00158 Sigma-54 interaction domain 143 308 3.5E-62 T 14-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 GYO_1397 61d2666ceba514a653985a38fe2bb0b1 199 Gene3D G3DSA:3.40.50.300 4 199 9.5E-81 T 14-10-2018 GYO_1397 61d2666ceba514a653985a38fe2bb0b1 199 Hamap MF_00065 Adenylyl-sulfate kinase [cysC]. 25 197 39.72 T 14-10-2018 IPR002891 Adenylyl-sulfate kinase GO:0000103|GO:0004020|GO:0005524 KEGG: 00230+2.7.1.25|KEGG: 00920+2.7.1.25|MetaCyc: PWY-5340|Reactome: R-HSA-174362|Reactome: R-HSA-2408550 GYO_1397 61d2666ceba514a653985a38fe2bb0b1 199 TIGRFAM TIGR00455 apsK: adenylyl-sulfate kinase 9 192 1.8E-92 T 14-10-2018 IPR002891 Adenylyl-sulfate kinase GO:0000103|GO:0004020|GO:0005524 KEGG: 00230+2.7.1.25|KEGG: 00920+2.7.1.25|MetaCyc: PWY-5340|Reactome: R-HSA-174362|Reactome: R-HSA-2408550 GYO_1397 61d2666ceba514a653985a38fe2bb0b1 199 Pfam PF01583 Adenylylsulphate kinase 26 179 5.7E-75 T 14-10-2018 GYO_1397 61d2666ceba514a653985a38fe2bb0b1 199 SUPERFAMILY SSF52540 20 196 4.25E-37 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase GYO_3063 b5b7df859cff746a696558a3d0f15153 195 Pfam PF01926 50S ribosome-binding GTPase 25 143 1.0E-21 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 GYO_3063 b5b7df859cff746a696558a3d0f15153 195 Hamap MF_00321 Probable GTP-binding protein EngB [engB]. 11 193 29.779 T 14-10-2018 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC GO:0005525 GYO_3063 b5b7df859cff746a696558a3d0f15153 195 SUPERFAMILY SSF52540 16 193 7.96E-39 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase GYO_3063 b5b7df859cff746a696558a3d0f15153 195 Gene3D G3DSA:3.40.50.300 1 195 3.3E-57 T 14-10-2018 GYO_3063 b5b7df859cff746a696558a3d0f15153 195 TIGRFAM TIGR03598 GTPase_YsxC: ribosome biogenesis GTP-binding protein YsxC 7 189 5.6E-72 T 14-10-2018 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC GO:0005525 GYO_1093 5e6f74ca1741bdcac7750db23e1cc872 314 SUPERFAMILY SSF51215 37 168 1.57E-12 T 14-10-2018 IPR037923 Transcription regulator HTH-like GYO_1093 5e6f74ca1741bdcac7750db23e1cc872 314 SUPERFAMILY SSF46689 189 239 4.39E-7 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 GYO_1093 5e6f74ca1741bdcac7750db23e1cc872 314 Gene3D G3DSA:1.10.10.60 187 236 2.8E-11 T 14-10-2018 GYO_1093 5e6f74ca1741bdcac7750db23e1cc872 314 Gene3D G3DSA:2.60.120.10 15 128 5.1E-10 T 14-10-2018 IPR014710 RmlC-like jelly roll fold GYO_1093 5e6f74ca1741bdcac7750db23e1cc872 314 SMART SM00342 205 287 2.7E-28 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 GYO_1093 5e6f74ca1741bdcac7750db23e1cc872 314 SUPERFAMILY SSF46689 242 288 1.7E-7 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 GYO_1093 5e6f74ca1741bdcac7750db23e1cc872 314 Pfam PF12833 Helix-turn-helix domain 212 287 1.5E-16 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 GYO_1093 5e6f74ca1741bdcac7750db23e1cc872 314 Pfam PF02311 AraC-like ligand binding domain 25 159 1.8E-20 T 14-10-2018 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 GYO_1093 5e6f74ca1741bdcac7750db23e1cc872 314 Gene3D G3DSA:1.10.10.60 237 294 3.3E-13 T 14-10-2018 GYO_1093 5e6f74ca1741bdcac7750db23e1cc872 314 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 242 283 - T 14-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 GYO_4091 d685d0ca7321da043558809968d979bc 123 Pfam PF00072 Response regulator receiver domain 5 115 3.7E-30 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 GYO_4091 d685d0ca7321da043558809968d979bc 123 SUPERFAMILY SSF52172 4 119 1.99E-36 T 14-10-2018 IPR011006 CheY-like superfamily GYO_4091 d685d0ca7321da043558809968d979bc 123 Gene3D G3DSA:3.40.50.2300 1 123 7.3E-45 T 14-10-2018 GYO_4091 d685d0ca7321da043558809968d979bc 123 SMART SM00448 3 114 3.4E-32 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 GYO_1444 b29eea0d9f3921673bd4d56a98eb8020 304 Gene3D G3DSA:1.10.3720.10 90 299 7.7E-20 T 14-10-2018 IPR035906 MetI-like superfamily GYO_1444 b29eea0d9f3921673bd4d56a98eb8020 304 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 118 301 1.8E-29 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 GYO_1444 b29eea0d9f3921673bd4d56a98eb8020 304 SUPERFAMILY SSF161098 95 287 1.7E-25 T 14-10-2018 IPR035906 MetI-like superfamily GYO_1444 b29eea0d9f3921673bd4d56a98eb8020 304 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 27 77 6.3E-16 T 14-10-2018 IPR025966 Oligopeptide transport permease C-like, N-terminal domain GYO_4105 d3ce9543db56ac8088d5b1e2fb9f5843 223 Gene3D G3DSA:1.20.950.20 2 214 4.1E-80 T 14-10-2018 GYO_4105 d3ce9543db56ac8088d5b1e2fb9f5843 223 SUPERFAMILY SSF103501 2 222 2.62E-71 T 14-10-2018 IPR036197 NarG-like superfamily GYO_4105 d3ce9543db56ac8088d5b1e2fb9f5843 223 Pfam PF02665 Nitrate reductase gamma subunit 4 222 1.7E-86 T 14-10-2018 IPR023234 NarG-like domain GYO_4105 d3ce9543db56ac8088d5b1e2fb9f5843 223 TIGRFAM TIGR00351 narI: respiratory nitrate reductase, gamma subunit 1 223 4.3E-110 T 14-10-2018 IPR003816 Nitrate reductase, gamma subunit GO:0008940|GO:0009325|GO:0055114 GYO_2682 f00fd4061568fb0fe4db06243741c40c 576 Gene3D G3DSA:3.40.50.300 1 230 5.2E-44 T 14-10-2018 GYO_2682 f00fd4061568fb0fe4db06243741c40c 576 SUPERFAMILY SSF52540 4 521 4.49E-28 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase GYO_2682 f00fd4061568fb0fe4db06243741c40c 576 SUPERFAMILY SSF52540 2 219 1.21E-62 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase GYO_2682 f00fd4061568fb0fe4db06243741c40c 576 PIRSF PIRSF003128 1 572 4.2E-200 T 14-10-2018 IPR004604 DNA recombination/repair protein RecN GO:0005524|GO:0006281|GO:0006310 GYO_2682 f00fd4061568fb0fe4db06243741c40c 576 Gene3D G3DSA:3.40.50.300 250 568 2.2E-52 T 14-10-2018 GYO_2682 f00fd4061568fb0fe4db06243741c40c 576 Pfam PF13476 AAA domain 4 230 1.3E-19 T 14-10-2018 IPR038729 Rad50/SbcC-type AAA domain GYO_2682 f00fd4061568fb0fe4db06243741c40c 576 TIGRFAM TIGR00634 recN: DNA repair protein RecN 1 568 1.1E-227 T 14-10-2018 IPR004604 DNA recombination/repair protein RecN GO:0005524|GO:0006281|GO:0006310 GYO_2120 dc5d464b806517e946b0a2beb6958182 394 TIGRFAM TIGR00492 alr: alanine racemase 6 379 4.9E-152 T 14-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 GYO_2120 dc5d464b806517e946b0a2beb6958182 394 SUPERFAMILY SSF50621 245 386 9.77E-46 T 14-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 GYO_2120 dc5d464b806517e946b0a2beb6958182 394 Hamap MF_01201 Alanine racemase. 5 379 34.508 T 14-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 GYO_2120 dc5d464b806517e946b0a2beb6958182 394 SMART SM01005 250 379 1.3E-60 T 14-10-2018 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 GYO_2120 dc5d464b806517e946b0a2beb6958182 394 ProSitePatterns PS00395 Alanine racemase pyridoxal-phosphate attachment site. 36 46 - T 14-10-2018 IPR020622 Alanine racemase, pyridoxal-phosphate attachment site KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 GYO_2120 dc5d464b806517e946b0a2beb6958182 394 Pfam PF01168 Alanine racemase, N-terminal domain 12 235 1.4E-66 T 14-10-2018 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 GYO_2120 dc5d464b806517e946b0a2beb6958182 394 SUPERFAMILY SSF51419 12 250 5.98E-64 T 14-10-2018 IPR029066 PLP-binding barrel GYO_2120 dc5d464b806517e946b0a2beb6958182 394 Gene3D G3DSA:3.20.20.10 14 230 7.1E-73 T 14-10-2018 IPR029066 PLP-binding barrel GYO_2120 dc5d464b806517e946b0a2beb6958182 394 Gene3D G3DSA:2.40.37.10 239 394 6.7E-60 T 14-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 GYO_2120 dc5d464b806517e946b0a2beb6958182 394 Pfam PF00842 Alanine racemase, C-terminal domain 250 378 3.0E-41 T 14-10-2018 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 GYO_2120 dc5d464b806517e946b0a2beb6958182 394 PRINTS PR00992 Alanine racemase signature 165 176 1.5E-66 T 14-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 GYO_2120 dc5d464b806517e946b0a2beb6958182 394 PRINTS PR00992 Alanine racemase signature 31 47 1.5E-66 T 14-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 GYO_2120 dc5d464b806517e946b0a2beb6958182 394 PRINTS PR00992 Alanine racemase signature 305 322 1.5E-66 T 14-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 GYO_2120 dc5d464b806517e946b0a2beb6958182 394 PRINTS PR00992 Alanine racemase signature 361 374 1.5E-66 T 14-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 GYO_2120 dc5d464b806517e946b0a2beb6958182 394 PRINTS PR00992 Alanine racemase signature 208 235 1.5E-66 T 14-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 GYO_2120 dc5d464b806517e946b0a2beb6958182 394 PRINTS PR00992 Alanine racemase signature 284 299 1.5E-66 T 14-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 GYO_2120 dc5d464b806517e946b0a2beb6958182 394 PRINTS PR00992 Alanine racemase signature 67 85 1.5E-66 T 14-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 GYO_2120 dc5d464b806517e946b0a2beb6958182 394 PRINTS PR00992 Alanine racemase signature 130 142 1.5E-66 T 14-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 GYO_2120 dc5d464b806517e946b0a2beb6958182 394 PRINTS PR00992 Alanine racemase signature 267 282 1.5E-66 T 14-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 GYO_2340 4b04eeabd056a379c23ea67d6e8ff65d 638 SUPERFAMILY SSF53300 446 631 1.42E-17 T 14-10-2018 IPR036465 von Willebrand factor A-like domain superfamily GYO_2340 4b04eeabd056a379c23ea67d6e8ff65d 638 SMART SM00327 442 633 1.2E-22 T 14-10-2018 IPR002035 von Willebrand factor, type A GYO_2340 4b04eeabd056a379c23ea67d6e8ff65d 638 Pfam PF00092 von Willebrand factor type A domain 447 624 8.3E-9 T 14-10-2018 IPR002035 von Willebrand factor, type A GYO_2340 4b04eeabd056a379c23ea67d6e8ff65d 638 Gene3D G3DSA:3.40.50.410 443 631 1.7E-13 T 14-10-2018 IPR036465 von Willebrand factor A-like domain superfamily GYO_0364 b7004cf1d1f35758ffcefd37d75b738f 151 Pfam PF04463 Protein of unknown function (DUF523) 2 145 2.9E-42 T 14-10-2018 IPR007553 Domain of unknown function DUF523 GYO_0907 2ee7d9687dcd7f2a79e5417a851719a2 227 Pfam PF13507 CobB/CobQ-like glutamine amidotransferase domain 2 205 1.8E-42 T 14-10-2018 GYO_0907 2ee7d9687dcd7f2a79e5417a851719a2 227 Hamap MF_00421 Phosphoribosylformylglycinamidine synthase subunit PurQ [purQ]. 1 217 43.908 T 14-10-2018 IPR010075 Phosphoribosylformylglycinamidine synthase subunit PurQ GO:0004642|GO:0005737|GO:0006189 KEGG: 00220+3.5.1.2|KEGG: 00230+6.3.5.3|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277 GYO_0907 2ee7d9687dcd7f2a79e5417a851719a2 227 PIRSF PIRSF001586 1 222 3.1E-87 T 14-10-2018 IPR010075 Phosphoribosylformylglycinamidine synthase subunit PurQ GO:0004642|GO:0005737|GO:0006189 KEGG: 00220+3.5.1.2|KEGG: 00230+6.3.5.3|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277 GYO_0907 2ee7d9687dcd7f2a79e5417a851719a2 227 SMART SM01211 1 219 2.6E-133 T 14-10-2018 GYO_0907 2ee7d9687dcd7f2a79e5417a851719a2 227 SUPERFAMILY SSF52317 2 219 3.47E-76 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like GYO_0907 2ee7d9687dcd7f2a79e5417a851719a2 227 TIGRFAM TIGR01737 FGAM_synth_I: phosphoribosylformylglycinamidine synthase I 1 218 2.6E-93 T 14-10-2018 IPR010075 Phosphoribosylformylglycinamidine synthase subunit PurQ GO:0004642|GO:0005737|GO:0006189 KEGG: 00220+3.5.1.2|KEGG: 00230+6.3.5.3|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277 GYO_0907 2ee7d9687dcd7f2a79e5417a851719a2 227 Gene3D G3DSA:3.40.50.880 1 220 9.1E-73 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like GYO_3699 59116a18386109b97621c92d849f04a6 217 SUPERFAMILY SSF161098 15 197 8.37E-39 T 14-10-2018 IPR035906 MetI-like superfamily GYO_3699 59116a18386109b97621c92d849f04a6 217 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 37 198 5.2E-22 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 GYO_3699 59116a18386109b97621c92d849f04a6 217 Gene3D G3DSA:1.10.3720.10 13 206 1.2E-31 T 14-10-2018 IPR035906 MetI-like superfamily GYO_2520 3fa487d043e26c510bc3ffc3fefb124c 224 Gene3D G3DSA:3.40.50.300 1 223 4.3E-88 T 14-10-2018 GYO_2520 3fa487d043e26c510bc3ffc3fefb124c 224 SUPERFAMILY SSF52540 6 220 1.65E-46 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase GYO_2520 3fa487d043e26c510bc3ffc3fefb124c 224 TIGRFAM TIGR00017 cmk: cytidylate kinase 4 218 2.6E-97 T 14-10-2018 IPR003136 Cytidylate kinase GO:0004127|GO:0005524|GO:0006139 KEGG: 00240+2.7.4.25|MetaCyc: PWY-7205 GYO_2520 3fa487d043e26c510bc3ffc3fefb124c 224 Hamap MF_00238 Cytidylate kinase [cmk]. 5 223 34.491 T 14-10-2018 IPR003136 Cytidylate kinase GO:0004127|GO:0005524|GO:0006139 KEGG: 00240+2.7.4.25|MetaCyc: PWY-7205 GYO_2520 3fa487d043e26c510bc3ffc3fefb124c 224 Pfam PF02224 Cytidylate kinase 7 220 2.0E-85 T 14-10-2018 IPR011994 Cytidylate kinase domain GO:0004127|GO:0005524|GO:0006139 KEGG: 00240+2.7.4.25|MetaCyc: PWY-7205 GYO_4382 0b3323af5fd1010ba7d6aea3999f399d 271 Hamap MF_01673 5-deoxy-glucuronate isomerase [iolB]. 1 271 63.022 T 14-10-2018 IPR023770 5-deoxy-glucuronate isomerase, Bacilli GO:0008880|GO:0019310 KEGG: 00562+5.3.1.30 GYO_4382 0b3323af5fd1010ba7d6aea3999f399d 271 TIGRFAM TIGR04378 myo_inos_iolB: 5-deoxy-glucuronate isomerase 21 268 3.9E-110 T 14-10-2018 IPR024203 5-deoxy-glucuronate isomerase, IolB GO:0008880|GO:0019310 KEGG: 00562+5.3.1.30 GYO_4382 0b3323af5fd1010ba7d6aea3999f399d 271 PIRSF PIRSF036628 1 271 1.9E-115 T 14-10-2018 IPR024203 5-deoxy-glucuronate isomerase, IolB GO:0008880|GO:0019310 KEGG: 00562+5.3.1.30 GYO_4382 0b3323af5fd1010ba7d6aea3999f399d 271 Gene3D G3DSA:2.60.120.10 127 271 3.4E-58 T 14-10-2018 IPR014710 RmlC-like jelly roll fold GYO_4382 0b3323af5fd1010ba7d6aea3999f399d 271 Pfam PF04962 KduI/IolB family 13 268 2.5E-106 T 14-10-2018 IPR021120 KduI/IolB isomerase GO:0016861 KEGG: 00040+5.3.1.17|MetaCyc: PWY-6507 GYO_4382 0b3323af5fd1010ba7d6aea3999f399d 271 Gene3D G3DSA:2.60.120.10 18 126 3.6E-36 T 14-10-2018 IPR014710 RmlC-like jelly roll fold GYO_4382 0b3323af5fd1010ba7d6aea3999f399d 271 SUPERFAMILY SSF51182 4 257 2.31E-73 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily GYO_1757 3d7161002e542e5005c7b74bdeb29a63 180 PIRSF PIRSF000239 1 180 6.8E-59 T 14-10-2018 IPR024706 Peroxiredoxin, AhpC-type KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 GYO_1757 3d7161002e542e5005c7b74bdeb29a63 180 Pfam PF10417 C-terminal domain of 1-Cys peroxiredoxin 164 180 1.1E-4 T 14-10-2018 IPR019479 Peroxiredoxin, C-terminal GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 GYO_1757 3d7161002e542e5005c7b74bdeb29a63 180 Gene3D G3DSA:3.40.30.10 1 180 6.4E-73 T 14-10-2018 GYO_1757 3d7161002e542e5005c7b74bdeb29a63 180 SUPERFAMILY SSF52833 5 179 1.42E-57 T 14-10-2018 IPR036249 Thioredoxin-like superfamily GYO_1757 3d7161002e542e5005c7b74bdeb29a63 180 Pfam PF00578 AhpC/TSA family 6 141 2.5E-38 T 14-10-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 GYO_0443 51e5de0c83bb09e776a086d17e20056f 314 Pfam PF08664 YcbB domain 160 298 5.2E-47 T 14-10-2018 IPR013972 YcbB domain GYO_0443 51e5de0c83bb09e776a086d17e20056f 314 SUPERFAMILY SSF52172 2 145 1.25E-24 T 14-10-2018 IPR011006 CheY-like superfamily GYO_0443 51e5de0c83bb09e776a086d17e20056f 314 Gene3D G3DSA:3.40.50.2300 1 144 5.3E-22 T 14-10-2018 GYO_0443 51e5de0c83bb09e776a086d17e20056f 314 Pfam PF00072 Response regulator receiver domain 4 114 5.9E-24 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 GYO_0443 51e5de0c83bb09e776a086d17e20056f 314 SMART SM00448 1 114 2.4E-21 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 GYO_3580 7f1f896478359a4eb21fffbc3781043b 120 SUPERFAMILY SSF110455 2 109 2.41E-32 T 14-10-2018 GYO_3580 7f1f896478359a4eb21fffbc3781043b 120 SMART SM00493 5 79 4.3E-10 T 14-10-2018 IPR006171 TOPRIM domain GYO_3580 7f1f896478359a4eb21fffbc3781043b 120 Pfam PF01751 Toprim domain 7 85 5.0E-8 T 14-10-2018 IPR006171 TOPRIM domain GYO_3580 7f1f896478359a4eb21fffbc3781043b 120 Gene3D G3DSA:3.40.1360.20 1 119 8.5E-44 T 14-10-2018 GYO_1281 397c69d97394049ebc2502d96b575bf4 298 Gene3D G3DSA:3.40.50.300 1 233 6.7E-58 T 14-10-2018 GYO_1281 397c69d97394049ebc2502d96b575bf4 298 ProSitePatterns PS00211 ABC transporters family signature. 130 144 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 GYO_1281 397c69d97394049ebc2502d96b575bf4 298 SMART SM00382 26 239 3.7E-7 T 14-10-2018 IPR003593 AAA+ ATPase domain GYO_1281 397c69d97394049ebc2502d96b575bf4 298 Pfam PF13732 Domain of unknown function (DUF4162) 211 293 2.4E-20 T 14-10-2018 IPR025302 Domain of unknown function DUF4162 GYO_1281 397c69d97394049ebc2502d96b575bf4 298 Pfam PF00005 ABC transporter 18 157 7.2E-28 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 GYO_1281 397c69d97394049ebc2502d96b575bf4 298 SUPERFAMILY SSF52540 2 223 1.5E-56 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase GYO_1820 a50e66d5019359b6a675c6dfd052d160 105 Pfam PF14036 YlaH-like protein 20 94 5.3E-31 T 14-10-2018 IPR025620 YlaH-like protein GYO_2942 03dca29cc297a4b102d3b385c472c62e 935 SUPERFAMILY SSF52540 123 370 8.1E-40 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase GYO_2942 03dca29cc297a4b102d3b385c472c62e 935 SUPERFAMILY SSF46785 24 69 1.86E-7 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily GYO_2942 03dca29cc297a4b102d3b385c472c62e 935 ProSitePatterns PS00654 PRD domain signature. 501 513 - T 14-10-2018 IPR001550 Transcription antiterminator, conserved site GO:0003723|GO:0045893 GYO_2942 03dca29cc297a4b102d3b385c472c62e 935 SUPERFAMILY SSF63520 464 566 3.14E-16 T 14-10-2018 IPR036634 PRD domain superfamily GO:0006355 GYO_2942 03dca29cc297a4b102d3b385c472c62e 935 SMART SM00382 137 291 4.6E-12 T 14-10-2018 IPR003593 AAA+ ATPase domain GYO_2942 03dca29cc297a4b102d3b385c472c62e 935 Gene3D G3DSA:1.10.1790.10 469 568 1.4E-12 T 14-10-2018 GYO_2942 03dca29cc297a4b102d3b385c472c62e 935 Gene3D G3DSA:1.10.1790.10 832 930 2.6E-9 T 14-10-2018 GYO_2942 03dca29cc297a4b102d3b385c472c62e 935 SUPERFAMILY SSF63520 824 928 2.49E-16 T 14-10-2018 IPR036634 PRD domain superfamily GO:0006355 GYO_2942 03dca29cc297a4b102d3b385c472c62e 935 Pfam PF00874 PRD domain 479 565 1.1E-13 T 14-10-2018 IPR011608 PRD domain GO:0006355 GYO_2942 03dca29cc297a4b102d3b385c472c62e 935 Pfam PF00874 PRD domain 843 927 3.6E-14 T 14-10-2018 IPR011608 PRD domain GO:0006355 GYO_2942 03dca29cc297a4b102d3b385c472c62e 935 Pfam PF03610 PTS system fructose IIA component 576 679 8.7E-12 T 14-10-2018 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 GYO_2942 03dca29cc297a4b102d3b385c472c62e 935 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 210 225 - T 14-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 GYO_2942 03dca29cc297a4b102d3b385c472c62e 935 Gene3D G3DSA:3.40.50.510 571 707 1.1E-40 T 14-10-2018 IPR036662 Phosphotransferase system, mannose-type IIA component superfamily GO:0009401|GO:0016021 GYO_2942 03dca29cc297a4b102d3b385c472c62e 935 Gene3D G3DSA:3.40.50.300 100 290 1.6E-42 T 14-10-2018 GYO_2942 03dca29cc297a4b102d3b385c472c62e 935 SUPERFAMILY SSF53062 574 692 1.83E-20 T 14-10-2018 IPR036662 Phosphotransferase system, mannose-type IIA component superfamily GO:0009401|GO:0016021 GYO_2942 03dca29cc297a4b102d3b385c472c62e 935 Pfam PF00158 Sigma-54 interaction domain 114 280 1.2E-47 T 14-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 GYO_0385 39e0d2aa4ba22782c986d2ad579c9a3f 335 Gene3D G3DSA:3.40.710.10 4 321 7.5E-68 T 14-10-2018 GYO_0385 39e0d2aa4ba22782c986d2ad579c9a3f 335 Pfam PF00144 Beta-lactamase 38 312 3.9E-26 T 14-10-2018 IPR001466 Beta-lactamase-related GYO_0385 39e0d2aa4ba22782c986d2ad579c9a3f 335 SUPERFAMILY SSF56601 4 324 1.31E-74 T 14-10-2018 IPR012338 Beta-lactamase/transpeptidase-like GYO_4004 715345d77eedce7010b130128501c392 269 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 11 31 - T 14-10-2018 IPR019776 Flagellar basal body rod protein, conserved site GYO_4004 715345d77eedce7010b130128501c392 269 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 4 146 5.5E-21 T 14-10-2018 IPR020013 Flagellar hook-basal body protein, FlgE/F/G GYO_4004 715345d77eedce7010b130128501c392 269 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 147 251 7.1E-22 T 14-10-2018 IPR020013 Flagellar hook-basal body protein, FlgE/F/G GYO_4004 715345d77eedce7010b130128501c392 269 Pfam PF00460 Flagella basal body rod protein 5 35 3.2E-11 T 14-10-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 GYO_4004 715345d77eedce7010b130128501c392 269 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 191 266 2.3E-19 T 14-10-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain GYO_4004 715345d77eedce7010b130128501c392 269 SUPERFAMILY SSF117143 109 230 1.57E-12 T 14-10-2018 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like GYO_0237 76a64400ecba9f351939c5767e4f49a8 149 Gene3D G3DSA:3.30.2220.30 17 137 2.2E-50 T 14-10-2018 IPR038559 Clostridium phage phiCD119, XkdN superfamily GYO_0237 76a64400ecba9f351939c5767e4f49a8 149 Pfam PF08890 Phage XkdN-like tail assembly chaperone protein, TAC 13 148 3.4E-39 T 14-10-2018 IPR014986 Clostridium phage phiCD119, XkdN GYO_0316 76a64400ecba9f351939c5767e4f49a8 149 Gene3D G3DSA:3.30.2220.30 17 137 2.2E-50 T 14-10-2018 IPR038559 Clostridium phage phiCD119, XkdN superfamily GYO_0316 76a64400ecba9f351939c5767e4f49a8 149 Pfam PF08890 Phage XkdN-like tail assembly chaperone protein, TAC 13 148 3.4E-39 T 14-10-2018 IPR014986 Clostridium phage phiCD119, XkdN GYO_0716 59b3213890ac046b2acc746dc35bcf08 191 Gene3D G3DSA:1.10.10.60 1 65 1.8E-25 T 14-10-2018 GYO_0716 59b3213890ac046b2acc746dc35bcf08 191 SUPERFAMILY SSF46689 4 70 5.64E-15 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 GYO_0716 59b3213890ac046b2acc746dc35bcf08 191 SUPERFAMILY SSF48498 80 189 5.84E-21 T 14-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily GYO_0716 59b3213890ac046b2acc746dc35bcf08 191 Gene3D G3DSA:1.10.357.10 68 191 6.7E-26 T 14-10-2018 GYO_0716 59b3213890ac046b2acc746dc35bcf08 191 Pfam PF16925 Bacterial transcriptional repressor C-terminal 94 185 6.2E-8 T 14-10-2018 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal GYO_0716 59b3213890ac046b2acc746dc35bcf08 191 Pfam PF00440 Bacterial regulatory proteins, tetR family 13 55 1.4E-11 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 GYO_4166 a982bf3c8e9ce16253a8b1887f676f2c 424 SUPERFAMILY SSF53223 14 193 1.18E-67 T 14-10-2018 GYO_4166 a982bf3c8e9ce16253a8b1887f676f2c 424 Gene3D G3DSA:1.10.8.1210 376 424 1.5E-16 T 14-10-2018 GYO_4166 a982bf3c8e9ce16253a8b1887f676f2c 424 Gene3D G3DSA:3.40.50.720 198 351 1.1E-79 T 14-10-2018 GYO_4166 a982bf3c8e9ce16253a8b1887f676f2c 424 SMART SM00839 193 422 2.9E-90 T 14-10-2018 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 GYO_4166 a982bf3c8e9ce16253a8b1887f676f2c 424 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 102 116 1.9E-30 T 14-10-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 GYO_4166 a982bf3c8e9ce16253a8b1887f676f2c 424 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 182 204 1.9E-30 T 14-10-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 GYO_4166 a982bf3c8e9ce16253a8b1887f676f2c 424 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 224 244 1.9E-30 T 14-10-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 GYO_4166 a982bf3c8e9ce16253a8b1887f676f2c 424 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 350 361 1.9E-30 T 14-10-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 GYO_4166 a982bf3c8e9ce16253a8b1887f676f2c 424 Gene3D G3DSA:1.10.8.1210 19 42 9.5E-100 T 14-10-2018 GYO_4166 a982bf3c8e9ce16253a8b1887f676f2c 424 PIRSF PIRSF000185 6 424 2.7E-167 T 14-10-2018 IPR014362 Glutamate dehydrogenase GO:0016639|GO:0055114 GYO_4166 a982bf3c8e9ce16253a8b1887f676f2c 424 Pfam PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase 191 422 3.2E-74 T 14-10-2018 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 GYO_4166 a982bf3c8e9ce16253a8b1887f676f2c 424 ProSitePatterns PS00074 Glu / Leu / Phe / Val dehydrogenases active site. 110 123 - T 14-10-2018 IPR033524 Leu/Phe/Val dehydrogenases active site Reactome: R-HSA-2151201|Reactome: R-HSA-70614 GYO_4166 a982bf3c8e9ce16253a8b1887f676f2c 424 Pfam PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain 45 173 8.7E-56 T 14-10-2018 IPR006097 Glutamate/phenylalanine/leucine/valine dehydrogenase, dimerisation domain GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 GYO_4166 a982bf3c8e9ce16253a8b1887f676f2c 424 SUPERFAMILY SSF51735 191 423 1.38E-74 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily GYO_4166 a982bf3c8e9ce16253a8b1887f676f2c 424 Gene3D G3DSA:3.40.50.10860 43 179 9.5E-100 T 14-10-2018 GYO_1873 c8404eeb5dd0bd3298054d85a5f39c19 121 PIRSF PIRSF018579 1 113 1.9E-48 T 14-10-2018 IPR009709 Protein of unknown function DUF1290 GYO_1873 c8404eeb5dd0bd3298054d85a5f39c19 121 Pfam PF06947 Protein of unknown function (DUF1290) 22 107 2.4E-35 T 14-10-2018 IPR009709 Protein of unknown function DUF1290 GYO_0199 aaff2d51bf12207896dd9c6bda7b30c6 190 SUPERFAMILY SSF56281 6 171 2.1E-21 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like GYO_0199 aaff2d51bf12207896dd9c6bda7b30c6 190 Pfam PF12706 Beta-lactamase superfamily domain 5 110 5.2E-9 T 14-10-2018 IPR001279 Metallo-beta-lactamase GYO_0199 aaff2d51bf12207896dd9c6bda7b30c6 190 Gene3D G3DSA:3.60.15.10 1 186 6.5E-21 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like GYO_0278 aaff2d51bf12207896dd9c6bda7b30c6 190 SUPERFAMILY SSF56281 6 171 2.1E-21 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like GYO_0278 aaff2d51bf12207896dd9c6bda7b30c6 190 Pfam PF12706 Beta-lactamase superfamily domain 5 110 5.2E-9 T 14-10-2018 IPR001279 Metallo-beta-lactamase GYO_0278 aaff2d51bf12207896dd9c6bda7b30c6 190 Gene3D G3DSA:3.60.15.10 1 186 6.5E-21 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like GYO_1024 be4813e439b759411f10e1593571a60b 226 SUPERFAMILY SSF52172 3 130 1.35E-28 T 14-10-2018 IPR011006 CheY-like superfamily GYO_1024 be4813e439b759411f10e1593571a60b 226 PIRSF PIRSF006171 1 226 1.5E-80 T 14-10-2018 IPR024187 Signal transduction response regulator, citrate/malate metabolism GO:0000160|GO:0003700 GYO_1024 be4813e439b759411f10e1593571a60b 226 Pfam PF08279 HTH domain 162 199 5.3E-5 T 14-10-2018 IPR013196 Helix-turn-helix, type 11 GYO_1024 be4813e439b759411f10e1593571a60b 226 Pfam PF00072 Response regulator receiver domain 4 114 8.7E-23 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 GYO_1024 be4813e439b759411f10e1593571a60b 226 SMART SM00448 2 115 4.5E-22 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 GYO_1024 be4813e439b759411f10e1593571a60b 226 Gene3D G3DSA:3.40.50.12740 2 215 5.3E-31 T 14-10-2018 GYO_1024 be4813e439b759411f10e1593571a60b 226 Pfam PF12431 Transcriptional regulator 131 159 4.6E-6 T 14-10-2018 IPR028141 Transcriptional regulator GYO_4119 944ee762d303f6ae50ea08da6a5c2869 239 Pfam PF00005 ABC transporter 20 166 4.5E-21 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 GYO_4119 944ee762d303f6ae50ea08da6a5c2869 239 SMART SM00382 29 217 0.0078 T 14-10-2018 IPR003593 AAA+ ATPase domain GYO_4119 944ee762d303f6ae50ea08da6a5c2869 239 Gene3D G3DSA:3.40.50.300 1 233 3.7E-42 T 14-10-2018 GYO_4119 944ee762d303f6ae50ea08da6a5c2869 239 SUPERFAMILY SSF52540 3 224 7.04E-45 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase GYO_3075 04a20d3b799aa6646f4b64a669b88ba9 172 Pfam PF01842 ACT domain 4 68 1.2E-15 T 14-10-2018 IPR002912 ACT domain GYO_3075 04a20d3b799aa6646f4b64a669b88ba9 172 Pfam PF10369 Small subunit of acetolactate synthase 85 158 2.7E-29 T 14-10-2018 IPR019455 Acetolactate synthase, small subunit, C-terminal KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111 GYO_3075 04a20d3b799aa6646f4b64a669b88ba9 172 Gene3D G3DSA:3.30.70.260 1 80 2.3E-29 T 14-10-2018 GYO_3075 04a20d3b799aa6646f4b64a669b88ba9 172 SUPERFAMILY SSF55021 2 77 1.98E-19 T 14-10-2018 GYO_3075 04a20d3b799aa6646f4b64a669b88ba9 172 Gene3D G3DSA:3.30.70.1150 84 165 1.9E-29 T 14-10-2018 IPR027271 Acetolactate synthase/Transcription factor NikR, C-terminal GYO_3075 04a20d3b799aa6646f4b64a669b88ba9 172 SUPERFAMILY SSF55021 80 160 5.95E-26 T 14-10-2018 GYO_3075 04a20d3b799aa6646f4b64a669b88ba9 172 TIGRFAM TIGR00119 acolac_sm: acetolactate synthase, small subunit 2 158 6.7E-67 T 14-10-2018 IPR004789 Acetolactate synthase, small subunit GO:0003984|GO:0009082 KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111 GYO_3075 04a20d3b799aa6646f4b64a669b88ba9 172 ProDom PD002844 SMALL SUBUNIT ACETOLACTATE SYNTHASE SYNTHASE TRANSFERASE ACID BIOSYNTHESIS III LYASE 1 77 2.0E-36 T 14-10-2018 GYO_3346 b3a7051824016546a182edf0f4494f1e 377 Gene3D G3DSA:3.40.50.2000 175 375 3.3E-45 T 14-10-2018 GYO_3346 b3a7051824016546a182edf0f4494f1e 377 Pfam PF13439 Glycosyltransferase Family 4 19 165 1.8E-10 T 14-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 GYO_3346 b3a7051824016546a182edf0f4494f1e 377 SUPERFAMILY SSF53756 2 375 1.01E-68 T 14-10-2018 GYO_3346 b3a7051824016546a182edf0f4494f1e 377 Gene3D G3DSA:3.40.50.2000 1 174 9.4E-15 T 14-10-2018 GYO_3346 b3a7051824016546a182edf0f4494f1e 377 Pfam PF00534 Glycosyl transferases group 1 181 354 4.3E-44 T 14-10-2018 IPR001296 Glycosyl transferase, family 1 GYO_1363 6db3a9b81e8705b1f6778300d5ff17f6 575 SUPERFAMILY SSF53850 131 573 7.06E-70 T 14-10-2018 GYO_1363 6db3a9b81e8705b1f6778300d5ff17f6 575 Pfam PF12793 Sugar transport-related sRNA regulator N-term 3 104 8.3E-23 T 14-10-2018 IPR025370 Transcriptional regulator SgrR, N-terminal HTH domain GYO_1363 6db3a9b81e8705b1f6778300d5ff17f6 575 Gene3D G3DSA:3.10.105.10 345 545 2.5E-14 T 14-10-2018 GYO_1363 6db3a9b81e8705b1f6778300d5ff17f6 575 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 176 455 2.2E-35 T 14-10-2018 IPR000914 Solute-binding protein family 5 domain GYO_1363 6db3a9b81e8705b1f6778300d5ff17f6 575 PIRSF PIRSF002741 123 575 7.7E-38 T 14-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 GYO_1363 6db3a9b81e8705b1f6778300d5ff17f6 575 PIRSF PIRSF002741 45 119 28.0 T 14-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 GYO_1363 6db3a9b81e8705b1f6778300d5ff17f6 575 Gene3D G3DSA:3.40.190.10 123 344 7.3E-40 T 14-10-2018 GYO_3281 0bbe6263d7cf6f0cf503c8b15a5cf9fb 266 Gene3D G3DSA:3.30.420.10 101 257 2.6E-14 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 GYO_3281 0bbe6263d7cf6f0cf503c8b15a5cf9fb 266 Pfam PF13276 HTH-like domain 32 84 1.8E-13 T 14-10-2018 IPR025948 HTH-like domain GYO_3281 0bbe6263d7cf6f0cf503c8b15a5cf9fb 266 Pfam PF00665 Integrase core domain 107 218 7.2E-22 T 14-10-2018 IPR001584 Integrase, catalytic core GO:0015074 GYO_3281 0bbe6263d7cf6f0cf503c8b15a5cf9fb 266 SUPERFAMILY SSF53098 101 260 3.67E-30 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily GYO_3729 0bbe6263d7cf6f0cf503c8b15a5cf9fb 266 Gene3D G3DSA:3.30.420.10 101 257 2.6E-14 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 GYO_3729 0bbe6263d7cf6f0cf503c8b15a5cf9fb 266 Pfam PF13276 HTH-like domain 32 84 1.8E-13 T 14-10-2018 IPR025948 HTH-like domain GYO_3729 0bbe6263d7cf6f0cf503c8b15a5cf9fb 266 Pfam PF00665 Integrase core domain 107 218 7.2E-22 T 14-10-2018 IPR001584 Integrase, catalytic core GO:0015074 GYO_3729 0bbe6263d7cf6f0cf503c8b15a5cf9fb 266 SUPERFAMILY SSF53098 101 260 3.67E-30 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily GYO_1287 f50916e88cb1296672ef525ec05eb0c1 284 SUPERFAMILY SSF54534 118 222 2.55E-35 T 14-10-2018 GYO_1287 f50916e88cb1296672ef525ec05eb0c1 284 Pfam PF13616 PPIC-type PPIASE domain 133 224 2.7E-28 T 14-10-2018 GYO_1287 f50916e88cb1296672ef525ec05eb0c1 284 SUPERFAMILY SSF109998 27 164 8.76E-17 T 14-10-2018 IPR027304 Trigger factor/SurA domain superfamily GYO_1287 f50916e88cb1296672ef525ec05eb0c1 284 Gene3D G3DSA:3.10.50.40 134 224 2.6E-40 T 14-10-2018 GYO_1287 f50916e88cb1296672ef525ec05eb0c1 284 Pfam PF05698 Bacterial trigger factor protein (TF) C-terminus 35 115 4.9E-5 T 14-10-2018 IPR008880 Trigger factor, C-terminal GO:0006457|GO:0015031 GYO_1287 f50916e88cb1296672ef525ec05eb0c1 284 Hamap MF_01145 Foldase protein PrsA [prsA]. 2 278 21.99 T 14-10-2018 IPR023059 Foldase protein PrsA GO:0003755 GYO_1287 f50916e88cb1296672ef525ec05eb0c1 284 ProSitePatterns PS01096 PpiC-type peptidyl-prolyl cis-trans isomerase signature. 163 183 - T 14-10-2018 IPR023058 Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site Reactome: R-HSA-1169408|Reactome: R-HSA-6804756|Reactome: R-HSA-6811555|Reactome: R-HSA-936440 GYO_0616 641715e0a7de5ec097feacb07a635f1b 143 Gene3D G3DSA:3.40.930.10 1 141 1.1E-45 T 14-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 GYO_0616 641715e0a7de5ec097feacb07a635f1b 143 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 3 141 4.4E-38 T 14-10-2018 IPR002178 PTS EIIA type-2 domain GYO_0616 641715e0a7de5ec097feacb07a635f1b 143 SUPERFAMILY SSF55804 2 141 4.06E-42 T 14-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 GYO_0616 641715e0a7de5ec097feacb07a635f1b 143 ProSitePatterns PS00372 PTS EIIA domains phosphorylation site signature 2. 47 63 - T 14-10-2018 IPR002178 PTS EIIA type-2 domain GYO_1742 992955fb0a2e19becb5ee4f2a907962f 254 SUPERFAMILY SSF51735 2 249 1.44E-77 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily GYO_1742 992955fb0a2e19becb5ee4f2a907962f 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 5 22 6.4E-36 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR GYO_1742 992955fb0a2e19becb5ee4f2a907962f 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 127 143 6.4E-36 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR GYO_1742 992955fb0a2e19becb5ee4f2a907962f 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 175 192 6.4E-36 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR GYO_1742 992955fb0a2e19becb5ee4f2a907962f 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 211 231 6.4E-36 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR GYO_1742 992955fb0a2e19becb5ee4f2a907962f 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 79 90 6.4E-36 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR GYO_1742 992955fb0a2e19becb5ee4f2a907962f 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 153 172 6.4E-36 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR GYO_1742 992955fb0a2e19becb5ee4f2a907962f 254 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 133 141 3.7E-7 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR GYO_1742 992955fb0a2e19becb5ee4f2a907962f 254 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 79 90 3.7E-7 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR GYO_1742 992955fb0a2e19becb5ee4f2a907962f 254 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 153 172 3.7E-7 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR GYO_1742 992955fb0a2e19becb5ee4f2a907962f 254 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 12 246 2.1E-54 T 14-10-2018 GYO_1742 992955fb0a2e19becb5ee4f2a907962f 254 Gene3D G3DSA:3.40.50.720 1 250 3.4E-77 T 14-10-2018 GYO_3754 17da2fc26f9c6b6655485268912f090f 436 PIRSF PIRSF000774 1 436 1.4E-125 T 14-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 GYO_3754 17da2fc26f9c6b6655485268912f090f 436 TIGRFAM TIGR02395 rpoN_sigma: RNA polymerase sigma-54 factor 10 433 2.0E-144 T 14-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 GYO_3754 17da2fc26f9c6b6655485268912f090f 436 ProSitePatterns PS00717 Sigma-54 factors family signature 1. 322 341 - T 14-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 GYO_3754 17da2fc26f9c6b6655485268912f090f 436 Gene3D G3DSA:1.10.10.1330 80 206 4.6E-29 T 14-10-2018 IPR038709 RNA polymerase sigma-54 factor, core-binding domain superfamily GYO_3754 17da2fc26f9c6b6655485268912f090f 436 Pfam PF04552 Sigma-54, DNA binding domain 275 434 5.0E-64 T 14-10-2018 IPR007634 RNA polymerase sigma factor 54, DNA-binding GYO_3754 17da2fc26f9c6b6655485268912f090f 436 Pfam PF04963 Sigma-54 factor, core binding domain 78 261 8.5E-50 T 14-10-2018 IPR007046 RNA polymerase sigma factor 54, core-binding domain GO:0003677|GO:0006352 GYO_3754 17da2fc26f9c6b6655485268912f090f 436 PRINTS PR00045 Sigma-54 factor signature 350 361 2.8E-27 T 14-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 GYO_3754 17da2fc26f9c6b6655485268912f090f 436 PRINTS PR00045 Sigma-54 factor signature 409 427 2.8E-27 T 14-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 GYO_3754 17da2fc26f9c6b6655485268912f090f 436 PRINTS PR00045 Sigma-54 factor signature 146 163 2.8E-27 T 14-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 GYO_3754 17da2fc26f9c6b6655485268912f090f 436 PRINTS PR00045 Sigma-54 factor signature 334 346 2.8E-27 T 14-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 GYO_3754 17da2fc26f9c6b6655485268912f090f 436 Pfam PF00309 Sigma-54 factor, Activator interacting domain (AID) 4 48 4.6E-12 T 14-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 GYO_3754 17da2fc26f9c6b6655485268912f090f 436 Gene3D G3DSA:1.10.10.60 375 433 1.1E-23 T 14-10-2018 GYO_3754 17da2fc26f9c6b6655485268912f090f 436 ProSitePatterns PS00718 Sigma-54 factors family signature 2. 414 421 - T 14-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 GYO_1614 8de741dd4d23282718fbd96e7e9ee9f7 335 SUPERFAMILY SSF52540 33 319 1.27E-71 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase GYO_1614 8de741dd4d23282718fbd96e7e9ee9f7 335 Gene3D G3DSA:3.40.50.300 1 331 1.0E-103 T 14-10-2018 GYO_1614 8de741dd4d23282718fbd96e7e9ee9f7 335 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 234 319 7.3E-24 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 GYO_1614 8de741dd4d23282718fbd96e7e9ee9f7 335 SMART SM00382 33 233 1.4E-16 T 14-10-2018 IPR003593 AAA+ ATPase domain GYO_1614 8de741dd4d23282718fbd96e7e9ee9f7 335 ProSitePatterns PS00211 ABC transporters family signature. 156 170 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 GYO_1614 8de741dd4d23282718fbd96e7e9ee9f7 335 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 236 299 8.5E-18 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 GYO_1614 8de741dd4d23282718fbd96e7e9ee9f7 335 Pfam PF00005 ABC transporter 25 183 1.3E-30 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 GYO_3587 ed7d28fce1d72805f86013db30e4e81a 48 Pfam PF14115 YuzL-like protein 3 42 1.3E-20 T 14-10-2018 IPR025625 YuzL-like protein GYO_1413 d4e246caa0b755a4aed0a79f7d6a9240 151 ProDom PD076312 INHIBITOR INTRACELLULAR PROTEINASE PRECURSOR SIGNAL DOMAIN SLH S-LAYER PROTEASE BSUPI 33 151 6.0E-61 T 14-10-2018 IPR020481 Intracellular proteinase inhibitor BsuPI GYO_1413 d4e246caa0b755a4aed0a79f7d6a9240 151 Gene3D G3DSA:2.60.40.2360 32 151 4.0E-49 T 14-10-2018 IPR038144 Intracellular proteinase inhibitor GYO_1413 d4e246caa0b755a4aed0a79f7d6a9240 151 Pfam PF12690 Intracellular proteinase inhibitor 51 127 6.3E-29 T 14-10-2018 IPR020481 Intracellular proteinase inhibitor BsuPI GYO_3431 73745b7830a853b6da8ba4286e6bb046 86 Pfam PF08958 Domain of unknown function (DUF1871) 9 85 8.1E-39 T 14-10-2018 IPR015053 Protein of unknown function DUF1871 GYO_3431 73745b7830a853b6da8ba4286e6bb046 86 ProDom PD062625 YUGE 9 85 3.0E-36 T 14-10-2018 IPR015053 Protein of unknown function DUF1871 GYO_3431 73745b7830a853b6da8ba4286e6bb046 86 Gene3D G3DSA:1.10.340.20 1 86 2.2E-32 T 14-10-2018 IPR023162 Apc36109-like domain superfamily GYO_3431 73745b7830a853b6da8ba4286e6bb046 86 SUPERFAMILY SSF116922 4 82 5.89E-29 T 14-10-2018 IPR023162 Apc36109-like domain superfamily GYO_1247 4cdcfd3c4fdcce7e51f1b8b5860b1e7e 176 SMART SM00422 45 113 7.3E-28 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 GYO_1247 4cdcfd3c4fdcce7e51f1b8b5860b1e7e 176 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 57 70 7.3E-5 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 GYO_1247 4cdcfd3c4fdcce7e51f1b8b5860b1e7e 176 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 46 57 7.3E-5 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 GYO_1247 4cdcfd3c4fdcce7e51f1b8b5860b1e7e 176 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 80 100 7.3E-5 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 GYO_1247 4cdcfd3c4fdcce7e51f1b8b5860b1e7e 176 Pfam PF13411 MerR HTH family regulatory protein 45 112 2.0E-16 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 GYO_1247 4cdcfd3c4fdcce7e51f1b8b5860b1e7e 176 Gene3D G3DSA:1.10.1660.10 32 151 6.8E-24 T 14-10-2018 GYO_1247 4cdcfd3c4fdcce7e51f1b8b5860b1e7e 176 SUPERFAMILY SSF46955 45 148 4.76E-21 T 14-10-2018 IPR009061 Putative DNA-binding domain superfamily GYO_1557 bcb93f4e73de92d7505cfa4a3ee57004 125 SUPERFAMILY SSF50729 6 124 1.43E-41 T 14-10-2018 GYO_1557 bcb93f4e73de92d7505cfa4a3ee57004 125 Pfam PF08000 Bacterial PH domain 3 123 3.7E-48 T 14-10-2018 IPR012544 Bacterial Pleckstrin homology domain GYO_1557 bcb93f4e73de92d7505cfa4a3ee57004 125 Gene3D G3DSA:2.30.29.50 1 125 1.4E-49 T 14-10-2018 IPR037063 Bacterial Pleckstrin homology domain superfamily GYO_1529 5787600a93a0b20b1dfdec34af978649 392 Pfam PF04101 Glycosyltransferase family 28 C-terminal domain 281 373 1.2E-13 T 14-10-2018 IPR007235 Glycosyl transferase, family 28, C-terminal GO:0016758 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|Reactome: R-HSA-446193|Reactome: R-HSA-5633231 GYO_1529 5787600a93a0b20b1dfdec34af978649 392 TIGRFAM TIGR01426 MGT: glycosyltransferase, MGT family 9 387 5.6E-156 T 14-10-2018 IPR006326 UDP-glycosyltransferase, MGT GO:0016758|GO:0016999 GYO_1529 5787600a93a0b20b1dfdec34af978649 392 SUPERFAMILY SSF53756 5 385 2.68E-78 T 14-10-2018 GYO_1529 5787600a93a0b20b1dfdec34af978649 392 Gene3D G3DSA:3.40.50.2000 9 382 4.0E-131 T 14-10-2018 GYO_1529 5787600a93a0b20b1dfdec34af978649 392 Gene3D G3DSA:3.40.50.2000 210 370 4.0E-131 T 14-10-2018 GYO_0512 affbbf7f1c6617d4184a9d782186e894 154 SUPERFAMILY SSF46785 8 147 3.42E-23 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily GYO_0512 affbbf7f1c6617d4184a9d782186e894 154 Pfam PF01047 MarR family 48 96 4.9E-15 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 GYO_0512 affbbf7f1c6617d4184a9d782186e894 154 SMART SM00347 31 131 1.9E-25 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 GYO_0512 affbbf7f1c6617d4184a9d782186e894 154 Gene3D G3DSA:1.10.10.10 2 154 2.9E-26 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily GYO_0512 affbbf7f1c6617d4184a9d782186e894 154 PRINTS PR00598 Bacterial regulatory protein MarR family signature 121 141 9.1E-7 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 GYO_0512 affbbf7f1c6617d4184a9d782186e894 154 PRINTS PR00598 Bacterial regulatory protein MarR family signature 72 87 9.1E-7 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 GYO_0512 affbbf7f1c6617d4184a9d782186e894 154 PRINTS PR00598 Bacterial regulatory protein MarR family signature 55 71 9.1E-7 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 GYO_0891 5f57314b8ed382eac5117321bb4c614c 290 Pfam PF16916 Dimerisation domain of Zinc Transporter 214 286 5.1E-17 T 14-10-2018 IPR027470 Cation efflux protein, cytoplasmic domain GYO_0891 5f57314b8ed382eac5117321bb4c614c 290 Gene3D G3DSA:3.30.70.1350 208 288 1.2E-14 T 14-10-2018 IPR036837 Cation efflux protein, cytoplasmic domain superfamily Reactome: R-HSA-435368 GYO_0891 5f57314b8ed382eac5117321bb4c614c 290 TIGRFAM TIGR01297 CDF: cation diffusion facilitator family transporter 11 288 4.1E-76 T 14-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 GYO_0891 5f57314b8ed382eac5117321bb4c614c 290 Gene3D G3DSA:1.20.1510.10 11 207 4.7E-55 T 14-10-2018 IPR027469 Cation efflux transmembrane domain superfamily GYO_0891 5f57314b8ed382eac5117321bb4c614c 290 SUPERFAMILY SSF161111 8 208 1.7E-53 T 14-10-2018 IPR027469 Cation efflux transmembrane domain superfamily GYO_0891 5f57314b8ed382eac5117321bb4c614c 290 SUPERFAMILY SSF160240 211 288 2.62E-17 T 14-10-2018 IPR036837 Cation efflux protein, cytoplasmic domain superfamily Reactome: R-HSA-435368 GYO_0891 5f57314b8ed382eac5117321bb4c614c 290 Pfam PF01545 Cation efflux family 15 206 8.1E-50 T 14-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 GYO_2836 a9fe6cb60ed6b87d563690daa549dd11 280 Pfam PF01488 Shikimate / quinate 5-dehydrogenase 118 194 3.7E-11 T 14-10-2018 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase GYO_2836 a9fe6cb60ed6b87d563690daa549dd11 280 SUPERFAMILY SSF53223 2 101 1.5E-35 T 14-10-2018 GYO_2836 a9fe6cb60ed6b87d563690daa549dd11 280 Gene3D G3DSA:3.40.50.10860 5 262 4.7E-95 T 14-10-2018 GYO_2836 a9fe6cb60ed6b87d563690daa549dd11 280 SUPERFAMILY SSF51735 102 272 6.55E-39 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily GYO_2836 a9fe6cb60ed6b87d563690daa549dd11 280 TIGRFAM TIGR00507 aroE: shikimate dehydrogenase 3 275 2.7E-113 T 14-10-2018 IPR011342 Shikimate dehydrogenase GO:0004764|GO:0019632|GO:0050661|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163 GYO_2836 a9fe6cb60ed6b87d563690daa549dd11 280 Gene3D G3DSA:3.40.50.720 101 241 4.7E-95 T 14-10-2018 GYO_2836 a9fe6cb60ed6b87d563690daa549dd11 280 Hamap MF_00222 Shikimate dehydrogenase (NADP(+)) [aroE]. 2 273 35.387 T 14-10-2018 IPR022893 Shikimate dehydrogenase family GO:0004764|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163 GYO_2836 a9fe6cb60ed6b87d563690daa549dd11 280 Pfam PF08501 Shikimate dehydrogenase substrate binding domain 7 89 1.2E-31 T 14-10-2018 IPR013708 Shikimate dehydrogenase substrate binding, N-terminal GO:0004764|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163 GYO_3655 e4188f0d17e1a691446e59206f9c7373 571 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 170 330 2.3E-47 T 14-10-2018 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 GYO_3655 e4188f0d17e1a691446e59206f9c7373 571 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 430 559 1.9E-4 T 14-10-2018 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 GYO_3655 e4188f0d17e1a691446e59206f9c7373 571 SUPERFAMILY SSF55124 13 145 1.11E-32 T 14-10-2018 IPR036136 Nitrite/Sulfite reductase ferredoxin-like domain superfamily GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 GYO_3655 e4188f0d17e1a691446e59206f9c7373 571 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 354 417 5.9E-15 T 14-10-2018 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 GYO_3655 e4188f0d17e1a691446e59206f9c7373 571 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 75 132 1.1E-13 T 14-10-2018 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 GYO_3655 e4188f0d17e1a691446e59206f9c7373 571 PRINTS PR00397 Sirohaem Fe-binding site signature 479 497 1.6E-8 T 14-10-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 GYO_3655 e4188f0d17e1a691446e59206f9c7373 571 PRINTS PR00397 Sirohaem Fe-binding site signature 431 449 1.6E-8 T 14-10-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 GYO_3655 e4188f0d17e1a691446e59206f9c7373 571 Gene3D G3DSA:3.30.413.10 427 568 6.0E-38 T 14-10-2018 GYO_3655 e4188f0d17e1a691446e59206f9c7373 571 SUPERFAMILY SSF55124 346 422 1.62E-22 T 14-10-2018 IPR036136 Nitrite/Sulfite reductase ferredoxin-like domain superfamily GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 GYO_3655 e4188f0d17e1a691446e59206f9c7373 571 SUPERFAMILY SSF56014 429 561 8.51E-36 T 14-10-2018 GYO_3655 e4188f0d17e1a691446e59206f9c7373 571 TIGRFAM TIGR02041 CysI: sulfite reductase (NADPH) hemoprotein, beta-component 17 560 6.7E-285 T 14-10-2018 IPR011786 Sulphite reductase (NADPH) hemoprotein, beta subunit GO:0004783|GO:0008652|GO:0009337|GO:0050661|GO:0051539 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 GYO_3655 e4188f0d17e1a691446e59206f9c7373 571 SUPERFAMILY SSF56014 146 344 3.01E-57 T 14-10-2018 GYO_3655 e4188f0d17e1a691446e59206f9c7373 571 Hamap MF_01540 Sulfite reductase [NADPH] hemoprotein beta-component [cysI]. 8 571 58.296 T 14-10-2018 IPR011786 Sulphite reductase (NADPH) hemoprotein, beta subunit GO:0004783|GO:0008652|GO:0009337|GO:0050661|GO:0051539 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 GYO_3655 e4188f0d17e1a691446e59206f9c7373 571 ProSitePatterns PS00365 Nitrite and sulfite reductases iron-sulfur/siroheme-binding site. 479 495 - T 14-10-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 GYO_0464 6aaa6a7b3e289c1f7db2537efd6d1008 70 Pfam PF02416 mttA/Hcf106 family 5 56 1.0E-21 T 14-10-2018 IPR003369 Sec-independent protein translocase protein TatA/B/E GO:0008565|GO:0015031 GYO_0464 6aaa6a7b3e289c1f7db2537efd6d1008 70 Hamap MF_00236 Sec-independent protein translocase protein TatA [tatA]. 2 66 16.644 T 14-10-2018 IPR006312 Sec-independent protein translocase protein TatA/E GO:0005886|GO:0008565|GO:0009306|GO:0015031|GO:0016021 GYO_0464 6aaa6a7b3e289c1f7db2537efd6d1008 70 TIGRFAM TIGR01411 tatAE: twin arginine-targeting protein translocase, TatA/E family 5 47 7.1E-17 T 14-10-2018 IPR006312 Sec-independent protein translocase protein TatA/E GO:0005886|GO:0008565|GO:0009306|GO:0015031|GO:0016021 GYO_0464 6aaa6a7b3e289c1f7db2537efd6d1008 70 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 2 22 1.9E-5 T 14-10-2018 GYO_0464 6aaa6a7b3e289c1f7db2537efd6d1008 70 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 22 41 1.9E-5 T 14-10-2018 GYO_3332 49a645778ca068ab780221680d1d7c90 371 Pfam PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain 10 126 2.1E-14 T 14-10-2018 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain GYO_3332 49a645778ca068ab780221680d1d7c90 371 SUPERFAMILY SSF54826 2 127 8.52E-34 T 14-10-2018 GYO_3332 49a645778ca068ab780221680d1d7c90 371 SUPERFAMILY SSF51604 125 360 4.59E-73 T 14-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily GYO_3332 49a645778ca068ab780221680d1d7c90 371 TIGRFAM TIGR01928 menC_lowGC/arch: o-succinylbenzoate synthase 10 333 4.2E-165 T 14-10-2018 IPR010197 o-Succinylbenzoate synthase, MenC type 2 GO:0009234|GO:0016829 KEGG: 00130+4.2.1.113|MetaCyc: PWY-5837 GYO_3332 49a645778ca068ab780221680d1d7c90 371 Gene3D G3DSA:3.20.20.120 119 347 6.1E-140 T 14-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily GYO_3332 49a645778ca068ab780221680d1d7c90 371 Pfam PF13378 Enolase C-terminal domain-like 146 355 2.0E-48 T 14-10-2018 IPR029065 Enolase C-terminal domain-like GYO_3332 49a645778ca068ab780221680d1d7c90 371 Hamap MF_01933 o-succinylbenzoate synthase [menC]. 2 360 46.005 T 14-10-2018 IPR010197 o-Succinylbenzoate synthase, MenC type 2 GO:0009234|GO:0016829 KEGG: 00130+4.2.1.113|MetaCyc: PWY-5837 GYO_3332 49a645778ca068ab780221680d1d7c90 371 Gene3D G3DSA:3.30.390.10 9 360 6.1E-140 T 14-10-2018 IPR029017 Enolase-like, N-terminal GYO_3332 49a645778ca068ab780221680d1d7c90 371 SMART SM00922 143 235 3.7E-21 T 14-10-2018 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal GYO_3253 6f29b7de7a0073da1b497d5889d19e76 420 TIGRFAM TIGR00275 TIGR00275: flavoprotein, HI0933 family 6 411 4.3E-146 T 14-10-2018 IPR004792 Conserved hypothetical protein CHP00275, flavoprotein HI0933-like GYO_3253 6f29b7de7a0073da1b497d5889d19e76 420 SUPERFAMILY SSF51905 2 414 3.43E-64 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily GYO_3253 6f29b7de7a0073da1b497d5889d19e76 420 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 5 27 2.6E-9 T 14-10-2018 GYO_3253 6f29b7de7a0073da1b497d5889d19e76 420 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 160 169 2.6E-9 T 14-10-2018 GYO_3253 6f29b7de7a0073da1b497d5889d19e76 420 Pfam PF03486 HI0933-like protein 4 412 1.6E-156 T 14-10-2018 GYO_3253 6f29b7de7a0073da1b497d5889d19e76 420 Gene3D G3DSA:3.50.50.60 7 408 9.3E-124 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily GYO_3253 6f29b7de7a0073da1b497d5889d19e76 420 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 157 175 1.4E-7 T 14-10-2018 GYO_3253 6f29b7de7a0073da1b497d5889d19e76 420 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 367 389 1.4E-7 T 14-10-2018 GYO_3253 6f29b7de7a0073da1b497d5889d19e76 420 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 6 25 1.4E-7 T 14-10-2018 GYO_3253 6f29b7de7a0073da1b497d5889d19e76 420 SUPERFAMILY SSF160996 194 360 4.45E-46 T 14-10-2018 GYO_3253 6f29b7de7a0073da1b497d5889d19e76 420 Gene3D G3DSA:2.40.30.10 193 359 9.3E-124 T 14-10-2018 GYO_3253 6f29b7de7a0073da1b497d5889d19e76 420 Gene3D G3DSA:1.10.8.260 278 342 9.3E-124 T 14-10-2018 IPR023166 HI0933-like insert domain superfamily GYO_1688 25023bd3866b86cfc8094e6dbab5d3a3 209 Hamap MF_01677 Methylthioribulose-1-phosphate dehydratase [mtnB]. 1 206 112.892 T 14-10-2018 IPR017714 Methylthioribulose-1-phosphate dehydratase GO:0005737|GO:0019509|GO:0046872 KEGG: 00270+4.2.1.109|MetaCyc: PWY-4361|Reactome: R-HSA-1237112 GYO_1688 25023bd3866b86cfc8094e6dbab5d3a3 209 TIGRFAM TIGR03328 salvage_mtnB: methylthioribulose-1-phosphate dehydratase 11 202 7.9E-68 T 14-10-2018 IPR017714 Methylthioribulose-1-phosphate dehydratase GO:0005737|GO:0019509|GO:0046872 KEGG: 00270+4.2.1.109|MetaCyc: PWY-4361|Reactome: R-HSA-1237112 GYO_1688 25023bd3866b86cfc8094e6dbab5d3a3 209 Gene3D G3DSA:3.40.225.10 3 208 4.3E-49 T 14-10-2018 IPR036409 Class II aldolase/adducin N-terminal domain superfamily GYO_1688 25023bd3866b86cfc8094e6dbab5d3a3 209 SUPERFAMILY SSF53639 5 204 4.12E-44 T 14-10-2018 IPR036409 Class II aldolase/adducin N-terminal domain superfamily GYO_1688 25023bd3866b86cfc8094e6dbab5d3a3 209 SMART SM01007 9 198 1.2E-43 T 14-10-2018 IPR001303 Class II aldolase/adducin N-terminal GYO_1688 25023bd3866b86cfc8094e6dbab5d3a3 209 Pfam PF00596 Class II Aldolase and Adducin N-terminal domain 9 195 1.2E-37 T 14-10-2018 IPR001303 Class II aldolase/adducin N-terminal GYO_1018 b3b168aaf8535cc4e643cacb70c6eaf4 122 SUPERFAMILY SSF140688 1 113 8.24E-56 T 14-10-2018 IPR038074 YfmB domain superfamily GYO_1018 b3b168aaf8535cc4e643cacb70c6eaf4 122 Gene3D G3DSA:1.10.8.570 1 113 3.2E-59 T 14-10-2018 IPR038074 YfmB domain superfamily GYO_1018 b3b168aaf8535cc4e643cacb70c6eaf4 122 Pfam PF11486 Protein of unknown function (DUF3212) 1 120 1.3E-62 T 14-10-2018 IPR021579 Protein of unknown function DUF3212 GYO_3336 0011d7ac79a1653b4d354b09666deafb 580 TIGRFAM TIGR00173 menD: 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase 10 444 4.3E-161 T 14-10-2018 IPR004433 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase GO:0009234|GO:0030976|GO:0070204 KEGG: 00130+2.2.1.9|MetaCyc: PWY-5837 GYO_3336 0011d7ac79a1653b4d354b09666deafb 580 Hamap MF_01659 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase [menD]. 3 570 38.314 T 14-10-2018 IPR004433 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase GO:0009234|GO:0030976|GO:0070204 KEGG: 00130+2.2.1.9|MetaCyc: PWY-5837 GYO_3336 0011d7ac79a1653b4d354b09666deafb 580 SUPERFAMILY SSF52518 385 567 3.84E-30 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold GYO_3336 0011d7ac79a1653b4d354b09666deafb 580 Gene3D G3DSA:3.40.50.1220 197 378 1.5E-68 T 14-10-2018 GYO_3336 0011d7ac79a1653b4d354b09666deafb 580 SUPERFAMILY SSF52467 166 373 2.06E-12 T 14-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily GYO_3336 0011d7ac79a1653b4d354b09666deafb 580 SUPERFAMILY SSF52518 14 186 6.2E-33 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold GYO_3336 0011d7ac79a1653b4d354b09666deafb 580 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 425 552 1.7E-8 T 14-10-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 GYO_3336 0011d7ac79a1653b4d354b09666deafb 580 Gene3D G3DSA:3.40.50.970 2 196 1.7E-70 T 14-10-2018 GYO_3336 0011d7ac79a1653b4d354b09666deafb 580 Gene3D G3DSA:3.40.50.970 379 580 3.5E-73 T 14-10-2018 GYO_3336 0011d7ac79a1653b4d354b09666deafb 580 Pfam PF16582 Middle domain of thiamine pyrophosphate 215 402 1.9E-17 T 14-10-2018 IPR032264 Menaquinone biosynthesis protein MenD, middle domain KEGG: 00130+2.2.1.9|MetaCyc: PWY-5837 GYO_3336 0011d7ac79a1653b4d354b09666deafb 580 PIRSF PIRSF004983 1 577 5.7E-215 T 14-10-2018 IPR004433 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase GO:0009234|GO:0030976|GO:0070204 KEGG: 00130+2.2.1.9|MetaCyc: PWY-5837 GYO_3336 0011d7ac79a1653b4d354b09666deafb 580 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 14 177 2.6E-35 T 14-10-2018 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 GYO_0454 836c1cbb3b84c93a3dcdb25dcde51895 230 Gene3D G3DSA:1.10.10.10 130 229 1.3E-35 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily GYO_0454 836c1cbb3b84c93a3dcdb25dcde51895 230 Pfam PF00072 Response regulator receiver domain 4 112 3.1E-26 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 GYO_0454 836c1cbb3b84c93a3dcdb25dcde51895 230 Gene3D G3DSA:3.40.50.2300 1 129 9.5E-36 T 14-10-2018 GYO_0454 836c1cbb3b84c93a3dcdb25dcde51895 230 SUPERFAMILY SSF52172 1 126 5.41E-39 T 14-10-2018 IPR011006 CheY-like superfamily GYO_0454 836c1cbb3b84c93a3dcdb25dcde51895 230 SMART SM00862 151 227 5.1E-27 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 GYO_0454 836c1cbb3b84c93a3dcdb25dcde51895 230 SUPERFAMILY SSF46894 128 227 9.64E-31 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 GYO_0454 836c1cbb3b84c93a3dcdb25dcde51895 230 SMART SM00448 2 112 1.1E-39 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 GYO_0454 836c1cbb3b84c93a3dcdb25dcde51895 230 Pfam PF00486 Transcriptional regulatory protein, C terminal 151 227 2.5E-27 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 GYO_0198 396c59fac9688a71a07e7cbfe3ed35d9 252 Pfam PF03837 RecT family 27 192 1.3E-38 T 14-10-2018 IPR018330 RecT family GO:0003677|GO:0006259 GYO_0198 396c59fac9688a71a07e7cbfe3ed35d9 252 TIGRFAM TIGR01913 bet_lambda: phage recombination protein Bet 8 187 2.5E-52 T 14-10-2018 IPR010183 Bacteriophage lambda, Bet GYO_0277 396c59fac9688a71a07e7cbfe3ed35d9 252 Pfam PF03837 RecT family 27 192 1.3E-38 T 14-10-2018 IPR018330 RecT family GO:0003677|GO:0006259 GYO_0277 396c59fac9688a71a07e7cbfe3ed35d9 252 TIGRFAM TIGR01913 bet_lambda: phage recombination protein Bet 8 187 2.5E-52 T 14-10-2018 IPR010183 Bacteriophage lambda, Bet GYO_1741 45ad8691ff83b40a025fa4c49a8ca425 286 Pfam PF10518 TAT (twin-arginine translocation) pathway signal sequence 3 26 1.4E-5 T 14-10-2018 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal GYO_1741 45ad8691ff83b40a025fa4c49a8ca425 286 Gene3D G3DSA:3.60.21.10 57 256 7.6E-22 T 14-10-2018 IPR029052 Metallo-dependent phosphatase-like GYO_1741 45ad8691ff83b40a025fa4c49a8ca425 286 Pfam PF00149 Calcineurin-like phosphoesterase 58 223 6.2E-12 T 14-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 GYO_1741 45ad8691ff83b40a025fa4c49a8ca425 286 SUPERFAMILY SSF56300 58 283 2.92E-34 T 14-10-2018 GYO_4276 a2fb9bff272bb4c0643e0dd830865d33 338 Pfam PF02322 Cytochrome bd terminal oxidase subunit II 4 326 8.6E-100 T 14-10-2018 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 GYO_4276 a2fb9bff272bb4c0643e0dd830865d33 338 PIRSF PIRSF000267 1 338 3.6E-110 T 14-10-2018 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 GYO_4276 a2fb9bff272bb4c0643e0dd830865d33 338 TIGRFAM TIGR00203 cydB: cytochrome d ubiquinol oxidase, subunit II 1 226 6.1E-113 T 14-10-2018 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 GYO_4276 a2fb9bff272bb4c0643e0dd830865d33 338 TIGRFAM TIGR00203 cydB: cytochrome d ubiquinol oxidase, subunit II 228 337 3.9E-41 T 14-10-2018 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 GYO_2933 3e0c0087bac77672d23b7a21c23cdd8e 134 SMART SM00422 1 70 3.2E-22 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 GYO_2933 3e0c0087bac77672d23b7a21c23cdd8e 134 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 13 26 2.6E-8 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 GYO_2933 3e0c0087bac77672d23b7a21c23cdd8e 134 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 37 57 2.6E-8 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 GYO_2933 3e0c0087bac77672d23b7a21c23cdd8e 134 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 2 13 2.6E-8 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 GYO_2933 3e0c0087bac77672d23b7a21c23cdd8e 134 SUPERFAMILY SSF46955 1 118 2.53E-32 T 14-10-2018 IPR009061 Putative DNA-binding domain superfamily GYO_2933 3e0c0087bac77672d23b7a21c23cdd8e 134 Pfam PF13411 MerR HTH family regulatory protein 1 66 3.7E-19 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 GYO_2933 3e0c0087bac77672d23b7a21c23cdd8e 134 Gene3D G3DSA:1.10.1660.10 1 133 2.8E-36 T 14-10-2018 GYO_1655 22ebccb8938da983442163ef0818bf33 110 Gene3D G3DSA:1.10.1660.10 6 87 8.3E-23 T 14-10-2018 GYO_1655 22ebccb8938da983442163ef0818bf33 110 SMART SM00422 14 82 4.1E-24 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 GYO_1655 22ebccb8938da983442163ef0818bf33 110 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 15 26 8.1E-6 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 GYO_1655 22ebccb8938da983442163ef0818bf33 110 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 49 69 8.1E-6 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 GYO_1655 22ebccb8938da983442163ef0818bf33 110 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 26 39 8.1E-6 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 GYO_1655 22ebccb8938da983442163ef0818bf33 110 SUPERFAMILY SSF46955 15 103 6.87E-18 T 14-10-2018 IPR009061 Putative DNA-binding domain superfamily GYO_1655 22ebccb8938da983442163ef0818bf33 110 Pfam PF13411 MerR HTH family regulatory protein 15 76 5.0E-15 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 GYO_2493 95c240e5b8f9a76b4d3a333c76e76e04 250 Hamap MF_00134_B Indole-3-glycerol phosphate synthase [trpC]. 4 249 31.417 T 14-10-2018 IPR013798 Indole-3-glycerol phosphate synthase GO:0004425 KEGG: 00400+4.1.1.48 GYO_2493 95c240e5b8f9a76b4d3a333c76e76e04 250 SUPERFAMILY SSF51366 17 249 2.12E-74 T 14-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 GYO_2493 95c240e5b8f9a76b4d3a333c76e76e04 250 ProSitePatterns PS00614 Indole-3-glycerol phosphate synthase signature. 42 60 - T 14-10-2018 IPR001468 Indole-3-glycerol phosphate synthase, conserved site GO:0004425|GO:0006568 KEGG: 00400+4.1.1.48 GYO_2493 95c240e5b8f9a76b4d3a333c76e76e04 250 Pfam PF00218 Indole-3-glycerol phosphate synthase 4 247 2.6E-88 T 14-10-2018 IPR013798 Indole-3-glycerol phosphate synthase GO:0004425 KEGG: 00400+4.1.1.48 GYO_2493 95c240e5b8f9a76b4d3a333c76e76e04 250 Gene3D G3DSA:3.20.20.70 1 250 2.8E-84 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 GYO_1096 51f0016a40f1bb5095bd59a2366b0015 392 SUPERFAMILY SSF55347 151 323 2.94E-27 T 14-10-2018 GYO_1096 51f0016a40f1bb5095bd59a2366b0015 392 Pfam PF02894 Oxidoreductase family, C-terminal alpha/beta domain 155 279 5.2E-26 T 14-10-2018 IPR004104 Oxidoreductase, C-terminal GO:0016491|GO:0055114 GYO_1096 51f0016a40f1bb5095bd59a2366b0015 392 Gene3D G3DSA:3.40.50.720 17 364 7.6E-115 T 14-10-2018 GYO_1096 51f0016a40f1bb5095bd59a2366b0015 392 SUPERFAMILY SSF51735 8 174 7.23E-38 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily GYO_1096 51f0016a40f1bb5095bd59a2366b0015 392 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 12 143 1.2E-28 T 14-10-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 GYO_1096 51f0016a40f1bb5095bd59a2366b0015 392 Gene3D G3DSA:3.30.360.10 148 389 7.6E-115 T 14-10-2018 GYO_1719 7283997861b4f5b1fe848f24864bfed7 364 Pfam PF00557 Metallopeptidase family M24 145 347 2.8E-63 T 14-10-2018 IPR000994 Peptidase M24 GYO_1719 7283997861b4f5b1fe848f24864bfed7 364 Gene3D G3DSA:3.40.350.10 1 135 1.9E-41 T 14-10-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal GYO_1719 7283997861b4f5b1fe848f24864bfed7 364 PRINTS PR00599 Methionine aminopeptidase-1 signature 217 233 7.6E-7 T 14-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 GYO_1719 7283997861b4f5b1fe848f24864bfed7 364 PRINTS PR00599 Methionine aminopeptidase-1 signature 315 327 7.6E-7 T 14-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 GYO_1719 7283997861b4f5b1fe848f24864bfed7 364 SUPERFAMILY SSF53092 2 136 8.37E-35 T 14-10-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal GYO_1719 7283997861b4f5b1fe848f24864bfed7 364 ProSitePatterns PS00491 Aminopeptidase P and proline dipeptidase signature. 293 305 - T 14-10-2018 IPR001131 Peptidase M24B, X-Pro dipeptidase/aminopeptidase P, conserved site GYO_1719 7283997861b4f5b1fe848f24864bfed7 364 Gene3D G3DSA:3.90.230.10 136 363 1.9E-79 T 14-10-2018 GYO_1719 7283997861b4f5b1fe848f24864bfed7 364 SUPERFAMILY SSF55920 139 363 2.62E-76 T 14-10-2018 IPR036005 Creatinase/aminopeptidase-like GYO_1719 7283997861b4f5b1fe848f24864bfed7 364 Pfam PF01321 Creatinase/Prolidase N-terminal domain 3 136 4.4E-27 T 14-10-2018 IPR000587 Creatinase, N-terminal GO:0016787 GYO_3566 78503e344b5ae5c378130904ddc76e2a 127 SUPERFAMILY SSF54593 2 127 6.98E-27 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase GYO_3566 78503e344b5ae5c378130904ddc76e2a 127 Gene3D G3DSA:3.10.180.10 1 127 9.1E-50 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase GYO_3566 78503e344b5ae5c378130904ddc76e2a 127 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 6 124 1.1E-16 T 14-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain GYO_3629 dfe73563c3a0a89daa004c6fde9d0f78 248 Gene3D G3DSA:3.40.50.2300 4 141 4.0E-37 T 14-10-2018 GYO_3629 dfe73563c3a0a89daa004c6fde9d0f78 248 SMART SM00448 15 126 1.3E-41 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 GYO_3629 dfe73563c3a0a89daa004c6fde9d0f78 248 SUPERFAMILY SSF46894 141 241 3.12E-28 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 GYO_3629 dfe73563c3a0a89daa004c6fde9d0f78 248 Pfam PF00072 Response regulator receiver domain 17 126 6.3E-29 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 GYO_3629 dfe73563c3a0a89daa004c6fde9d0f78 248 SUPERFAMILY SSF52172 12 145 1.42E-40 T 14-10-2018 IPR011006 CheY-like superfamily GYO_3629 dfe73563c3a0a89daa004c6fde9d0f78 248 Gene3D G3DSA:1.10.10.10 142 247 1.8E-31 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily GYO_3629 dfe73563c3a0a89daa004c6fde9d0f78 248 Pfam PF00486 Transcriptional regulatory protein, C terminal 163 239 1.0E-25 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 GYO_3629 dfe73563c3a0a89daa004c6fde9d0f78 248 SMART SM00862 163 239 3.3E-26 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 GYO_1176 bf3ccd0cb0b9aa0c19bffc09f5aff620 67 Gene3D G3DSA:1.10.260.40 1 66 2.7E-24 T 14-10-2018 GYO_1176 bf3ccd0cb0b9aa0c19bffc09f5aff620 67 SUPERFAMILY SSF47413 2 64 3.49E-17 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 GYO_1176 bf3ccd0cb0b9aa0c19bffc09f5aff620 67 SMART SM00530 5 60 8.9E-14 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 GYO_1176 bf3ccd0cb0b9aa0c19bffc09f5aff620 67 Pfam PF01381 Helix-turn-helix 6 58 4.7E-14 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 GYO_3984 7169a91c8cb5468af3d3c9451d517606 440 Pfam PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain 313 413 6.2E-28 T 14-10-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 GYO_3984 7169a91c8cb5468af3d3c9451d517606 440 Pfam PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain 198 290 2.2E-39 T 14-10-2018 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 GYO_3984 7169a91c8cb5468af3d3c9451d517606 440 Gene3D G3DSA:3.40.50.720 229 438 3.8E-71 T 14-10-2018 GYO_3984 7169a91c8cb5468af3d3c9451d517606 440 PIRSF PIRSF500134 1 433 4.3E-179 T 14-10-2018 IPR028357 UDP-glucose 6-dehydrogenase, bacterial type GO:0000271|GO:0003979 KEGG: 00040+1.1.1.22|KEGG: 00053+1.1.1.22|KEGG: 00520+1.1.1.22|MetaCyc: PWY-7346|MetaCyc: PWY-7820 GYO_3984 7169a91c8cb5468af3d3c9451d517606 440 Gene3D G3DSA:1.20.5.100 197 228 7.8E-20 T 14-10-2018 GYO_3984 7169a91c8cb5468af3d3c9451d517606 440 SUPERFAMILY SSF51735 1 188 5.7E-53 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily GYO_3984 7169a91c8cb5468af3d3c9451d517606 440 Gene3D G3DSA:3.40.50.720 1 196 2.8E-73 T 14-10-2018 GYO_3984 7169a91c8cb5468af3d3c9451d517606 440 SUPERFAMILY SSF52413 301 426 1.57E-33 T 14-10-2018 IPR036220 UDP-glucose/GDP-mannose dehydrogenase, C-terminal domain superfamily Reactome: R-HSA-173599 GYO_3984 7169a91c8cb5468af3d3c9451d517606 440 Pfam PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain 1 184 5.3E-70 T 14-10-2018 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 GYO_3984 7169a91c8cb5468af3d3c9451d517606 440 TIGRFAM TIGR03026 NDP-sugDHase: nucleotide sugar dehydrogenase 1 411 3.0E-140 T 14-10-2018 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 GYO_3984 7169a91c8cb5468af3d3c9451d517606 440 SUPERFAMILY SSF48179 198 294 2.89E-32 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 GYO_3984 7169a91c8cb5468af3d3c9451d517606 440 PIRSF PIRSF000124 1 430 8.2E-143 T 14-10-2018 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 GYO_3984 7169a91c8cb5468af3d3c9451d517606 440 SMART SM00984 313 415 6.7E-41 T 14-10-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 GYO_0488 eaac190c1c500e9384ed11fed6a9d650 325 Gene3D G3DSA:3.40.50.1980 36 209 4.5E-68 T 14-10-2018 GYO_0488 eaac190c1c500e9384ed11fed6a9d650 325 Pfam PF01297 Zinc-uptake complex component A periplasmic 39 319 1.4E-81 T 14-10-2018 IPR006127 Periplasmic solute binding protein, ZnuA-like GO:0030001|GO:0046872 GYO_0488 eaac190c1c500e9384ed11fed6a9d650 325 Gene3D G3DSA:3.40.50.1980 210 325 2.0E-46 T 14-10-2018 GYO_0488 eaac190c1c500e9384ed11fed6a9d650 325 PRINTS PR00691 Adhesin B signature 80 99 6.6E-14 T 14-10-2018 IPR006129 Adhesin B GO:0007155 GYO_0488 eaac190c1c500e9384ed11fed6a9d650 325 PRINTS PR00691 Adhesin B signature 36 57 6.6E-14 T 14-10-2018 IPR006129 Adhesin B GO:0007155 GYO_0488 eaac190c1c500e9384ed11fed6a9d650 325 PRINTS PR00691 Adhesin B signature 207 224 6.6E-14 T 14-10-2018 IPR006129 Adhesin B GO:0007155 GYO_0488 eaac190c1c500e9384ed11fed6a9d650 325 PRINTS PR00691 Adhesin B signature 300 318 6.6E-14 T 14-10-2018 IPR006129 Adhesin B GO:0007155 GYO_0488 eaac190c1c500e9384ed11fed6a9d650 325 PRINTS PR00691 Adhesin B signature 61 79 6.6E-14 T 14-10-2018 IPR006129 Adhesin B GO:0007155 GYO_0488 eaac190c1c500e9384ed11fed6a9d650 325 PRINTS PR00690 Adhesin family signature 36 54 3.5E-16 T 14-10-2018 IPR006128 Adhesion lipoprotein GO:0007155 GYO_0488 eaac190c1c500e9384ed11fed6a9d650 325 PRINTS PR00690 Adhesin family signature 80 97 3.5E-16 T 14-10-2018 IPR006128 Adhesion lipoprotein GO:0007155 GYO_0488 eaac190c1c500e9384ed11fed6a9d650 325 PRINTS PR00690 Adhesin family signature 260 278 3.5E-16 T 14-10-2018 IPR006128 Adhesion lipoprotein GO:0007155 GYO_0488 eaac190c1c500e9384ed11fed6a9d650 325 PRINTS PR00690 Adhesin family signature 67 80 3.5E-16 T 14-10-2018 IPR006128 Adhesion lipoprotein GO:0007155 GYO_0488 eaac190c1c500e9384ed11fed6a9d650 325 PRINTS PR00690 Adhesin family signature 207 228 3.5E-16 T 14-10-2018 IPR006128 Adhesion lipoprotein GO:0007155 GYO_0488 eaac190c1c500e9384ed11fed6a9d650 325 SUPERFAMILY SSF53807 16 321 3.48E-90 T 14-10-2018 GYO_3479 cbf2e2fa932a9b4f1c9058a80b98cc23 443 TIGRFAM TIGR03926 T7_EssB: type VII secretion protein EssB 8 381 1.6E-135 T 14-10-2018 IPR018778 Type VII secretion system EssB GYO_3479 cbf2e2fa932a9b4f1c9058a80b98cc23 443 Gene3D G3DSA:1.10.510.10 1 218 6.3E-85 T 14-10-2018 GYO_3479 cbf2e2fa932a9b4f1c9058a80b98cc23 443 Gene3D G3DSA:1.25.40.680 240 400 8.3E-39 T 14-10-2018 GYO_3479 cbf2e2fa932a9b4f1c9058a80b98cc23 443 Pfam PF10140 WXG100 protein secretion system (Wss), protein YukC 28 381 1.4E-127 T 14-10-2018 IPR018778 Type VII secretion system EssB GYO_2481 114646b5e3da27138fa3405a601a5942 255 Pfam PF00032 Cytochrome b(C-terminal)/b6/petD 71 159 1.2E-8 T 14-10-2018 IPR005798 Cytochrome b/b6, C-terminal GO:0009055|GO:0016020|GO:0016491 Reactome: R-HSA-611105 GYO_2481 114646b5e3da27138fa3405a601a5942 255 Gene3D G3DSA:1.10.760.10 182 253 2.1E-15 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 GYO_2481 114646b5e3da27138fa3405a601a5942 255 PIRSF PIRSF036636 1 255 4.7E-154 T 14-10-2018 IPR012049 Menaquinone:cytochrome c reductase, cytochrome b/c subunit GO:0005506|GO:0009055|GO:0016021|GO:0020037 GYO_2481 114646b5e3da27138fa3405a601a5942 255 SUPERFAMILY SSF46626 133 251 1.62E-14 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 GYO_2481 114646b5e3da27138fa3405a601a5942 255 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 180 249 6.2E-14 T 14-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 GYO_2481 114646b5e3da27138fa3405a601a5942 255 SUPERFAMILY SSF81648 21 156 8.5E-30 T 14-10-2018 IPR036150 Cytochrome b/b6, C-terminal domain superfamily GO:0009055|GO:0016020|GO:0016491 Reactome: R-HSA-611105 GYO_2481 114646b5e3da27138fa3405a601a5942 255 Gene3D G3DSA:1.20.810.10 12 170 7.0E-25 T 14-10-2018 IPR027387 Cytochrome b/b6-like domain superfamily Reactome: R-HSA-611105 GYO_0975 6dfa6b056e571a41cbd8789b1482139e 107 Pfam PF03992 Antibiotic biosynthesis monooxygenase 1 78 5.0E-16 T 14-10-2018 IPR007138 Antibiotic biosynthesis monooxygenase domain GYO_0975 6dfa6b056e571a41cbd8789b1482139e 107 Gene3D G3DSA:3.30.70.100 1 107 1.6E-42 T 14-10-2018 GYO_0975 6dfa6b056e571a41cbd8789b1482139e 107 SUPERFAMILY SSF54909 1 98 5.78E-24 T 14-10-2018 IPR011008 Dimeric alpha-beta barrel GYO_4357 0074379f4c422c17e697b83be6eceb44 224 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 13 113 3.9E-26 T 14-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 GYO_4357 0074379f4c422c17e697b83be6eceb44 224 Gene3D G3DSA:1.10.3720.10 2 221 1.4E-58 T 14-10-2018 IPR035906 MetI-like superfamily GYO_4357 0074379f4c422c17e697b83be6eceb44 224 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 35 219 9.4E-25 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 GYO_4357 0074379f4c422c17e697b83be6eceb44 224 SUPERFAMILY SSF161098 14 210 1.16E-44 T 14-10-2018 IPR035906 MetI-like superfamily GYO_4351 f12a767c20a219dff5578799f02b9c64 313 Pfam PF04198 Putative sugar-binding domain 57 311 2.7E-84 T 14-10-2018 IPR007324 Sugar-binding domain, putative GO:0030246 GYO_4351 f12a767c20a219dff5578799f02b9c64 313 Gene3D G3DSA:1.10.10.60 1 52 2.5E-20 T 14-10-2018 GYO_4351 f12a767c20a219dff5578799f02b9c64 313 Pfam PF13384 Homeodomain-like domain 11 49 6.8E-7 T 14-10-2018 GYO_4351 f12a767c20a219dff5578799f02b9c64 313 Gene3D G3DSA:3.40.50.1360 53 313 2.0E-90 T 14-10-2018 GYO_4351 f12a767c20a219dff5578799f02b9c64 313 SUPERFAMILY SSF88659 13 47 3.4E-7 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like GYO_4351 f12a767c20a219dff5578799f02b9c64 313 SUPERFAMILY SSF100950 56 311 1.54E-74 T 14-10-2018 IPR037171 NagB/RpiA transferase-like GYO_2868 cd15729cb2fc2328ab24edc58191afdc 375 Pfam PF00753 Metallo-beta-lactamase superfamily 130 277 3.0E-12 T 14-10-2018 IPR001279 Metallo-beta-lactamase GYO_2868 cd15729cb2fc2328ab24edc58191afdc 375 Gene3D G3DSA:3.60.15.10 119 355 4.5E-46 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like GYO_2868 cd15729cb2fc2328ab24edc58191afdc 375 Gene3D G3DSA:3.40.250.10 2 111 1.9E-16 T 14-10-2018 IPR036873 Rhodanese-like domain superfamily GYO_2868 cd15729cb2fc2328ab24edc58191afdc 375 SMART SM00849 130 294 4.7E-28 T 14-10-2018 IPR001279 Metallo-beta-lactamase GYO_2868 cd15729cb2fc2328ab24edc58191afdc 375 SMART SM00450 7 109 2.8E-11 T 14-10-2018 IPR001763 Rhodanese-like domain GYO_2868 cd15729cb2fc2328ab24edc58191afdc 375 Pfam PF00581 Rhodanese-like domain 7 105 1.0E-8 T 14-10-2018 IPR001763 Rhodanese-like domain GYO_2868 cd15729cb2fc2328ab24edc58191afdc 375 SUPERFAMILY SSF52821 2 110 6.42E-17 T 14-10-2018 IPR036873 Rhodanese-like domain superfamily GYO_2868 cd15729cb2fc2328ab24edc58191afdc 375 SUPERFAMILY SSF56281 124 364 1.9E-40 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like GYO_1341 bad1aba7f7f169f204d99f85803b7106 509 SUPERFAMILY SSF51971 30 386 3.3E-31 T 14-10-2018 GYO_1341 bad1aba7f7f169f204d99f85803b7106 509 Gene3D G3DSA:2.102.10.10 408 509 6.5E-26 T 14-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 GYO_1341 bad1aba7f7f169f204d99f85803b7106 509 Gene3D G3DSA:3.50.50.60 34 380 1.2E-43 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily GYO_1341 bad1aba7f7f169f204d99f85803b7106 509 Gene3D G3DSA:3.30.9.10 127 338 1.2E-43 T 14-10-2018 GYO_1341 bad1aba7f7f169f204d99f85803b7106 509 Pfam PF00355 Rieske [2Fe-2S] domain 429 506 2.1E-13 T 14-10-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 GYO_1341 bad1aba7f7f169f204d99f85803b7106 509 Pfam PF01266 FAD dependent oxidoreductase 34 379 2.5E-40 T 14-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 GYO_1341 bad1aba7f7f169f204d99f85803b7106 509 SUPERFAMILY SSF50022 427 507 4.58E-25 T 14-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 GYO_1341 bad1aba7f7f169f204d99f85803b7106 509 PRINTS PR00162 Rieske 2Fe-2S subunit signature 458 469 8.3E-8 T 14-10-2018 IPR005805 Rieske iron-sulphur protein, C-terminal GO:0016020|GO:0055114 GYO_1341 bad1aba7f7f169f204d99f85803b7106 509 PRINTS PR00162 Rieske 2Fe-2S subunit signature 479 491 8.3E-8 T 14-10-2018 IPR005805 Rieske iron-sulphur protein, C-terminal GO:0016020|GO:0055114 GYO_1341 bad1aba7f7f169f204d99f85803b7106 509 PRINTS PR00162 Rieske 2Fe-2S subunit signature 491 503 8.3E-8 T 14-10-2018 IPR005805 Rieske iron-sulphur protein, C-terminal GO:0016020|GO:0055114 GYO_1456 b65e74a83a2f381dc971bd2850e11f6d 218 Gene3D G3DSA:3.30.70.1950 121 218 8.4E-37 T 14-10-2018 IPR038471 MecA, C-terminal domain superfamily GYO_1456 b65e74a83a2f381dc971bd2850e11f6d 218 Pfam PF05389 Negative regulator of genetic competence (MecA) 1 212 6.4E-56 T 14-10-2018 IPR008681 Negative regulator of genetic competence, MecA GYO_1456 b65e74a83a2f381dc971bd2850e11f6d 218 Hamap MF_01124 Adapter protein MecA [mecA]. 1 216 28.229 T 14-10-2018 IPR008681 Negative regulator of genetic competence, MecA GYO_1456 b65e74a83a2f381dc971bd2850e11f6d 218 PIRSF PIRSF029008 1 218 2.3E-78 T 14-10-2018 IPR008681 Negative regulator of genetic competence, MecA GYO_0044 9cd4c48ef4f641d9ef730f9d7656965b 99 Gene3D G3DSA:3.40.1440.10 1 97 1.3E-33 T 14-10-2018 IPR035901 GIY-YIG endonuclease superfamily Reactome: R-HSA-5693568|Reactome: R-HSA-6783310 GYO_0044 9cd4c48ef4f641d9ef730f9d7656965b 99 SMART SM00465 4 83 2.5E-6 T 14-10-2018 IPR000305 GIY-YIG endonuclease GYO_0044 9cd4c48ef4f641d9ef730f9d7656965b 99 SUPERFAMILY SSF82771 7 80 2.48E-15 T 14-10-2018 IPR035901 GIY-YIG endonuclease superfamily Reactome: R-HSA-5693568|Reactome: R-HSA-6783310 GYO_0044 9cd4c48ef4f641d9ef730f9d7656965b 99 Pfam PF01541 GIY-YIG catalytic domain 6 76 2.1E-17 T 14-10-2018 IPR000305 GIY-YIG endonuclease GYO_3445 87b1ed7a33f7fb71340235a8ccf58125 348 Pfam PF02653 Branched-chain amino acid transport system / permease component 53 329 9.2E-45 T 14-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 GYO_3445 87b1ed7a33f7fb71340235a8ccf58125 348 PRINTS PR00342 Rhesus blood group protein signature 136 159 1.3E-5 T 14-10-2018 IPR002229 Blood group Rhesus C/E/D polypeptide GO:0016020 GYO_3445 87b1ed7a33f7fb71340235a8ccf58125 348 PRINTS PR00342 Rhesus blood group protein signature 279 292 1.3E-5 T 14-10-2018 IPR002229 Blood group Rhesus C/E/D polypeptide GO:0016020 GYO_3445 87b1ed7a33f7fb71340235a8ccf58125 348 PRINTS PR00342 Rhesus blood group protein signature 9 27 1.3E-5 T 14-10-2018 IPR002229 Blood group Rhesus C/E/D polypeptide GO:0016020 GYO_3445 87b1ed7a33f7fb71340235a8ccf58125 348 PRINTS PR00342 Rhesus blood group protein signature 70 87 1.3E-5 T 14-10-2018 IPR002229 Blood group Rhesus C/E/D polypeptide GO:0016020 GYO_3810 aaef2b87adfd55e9e4ac30df323aabce 316 Pfam PF02650 WhiA C-terminal HTH domain 220 304 1.4E-35 T 14-10-2018 IPR023054 Sporulation regulator WhiA, C-terminal GYO_3810 aaef2b87adfd55e9e4ac30df323aabce 316 Gene3D G3DSA:1.10.10.10 215 309 3.4E-37 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily GYO_3810 aaef2b87adfd55e9e4ac30df323aabce 316 TIGRFAM TIGR00647 DNA_bind_WhiA: DNA-binding protein WhiA 4 305 4.5E-131 T 14-10-2018 IPR033981 Sporulation regulator WhiA-like GYO_3810 aaef2b87adfd55e9e4ac30df323aabce 316 Pfam PF10298 WhiA N-terminal LAGLIDADG-like domain 19 103 1.1E-35 T 14-10-2018 IPR018478 Sporulation transcription regulator WhiA, N-terminal domain GYO_3810 aaef2b87adfd55e9e4ac30df323aabce 316 Hamap MF_01420 Putative sporulation transcription regulator WhiA [whiA]. 3 307 35.501 T 14-10-2018 IPR003802 Sporulation regulator WhiA GO:0043937 GYO_3810 aaef2b87adfd55e9e4ac30df323aabce 316 Gene3D G3DSA:3.10.28.10 1 214 2.4E-66 T 14-10-2018 IPR027434 Homing endonuclease GYO_3810 aaef2b87adfd55e9e4ac30df323aabce 316 Pfam PF14527 WhiA LAGLIDADG-like domain 125 217 1.3E-36 T 14-10-2018 IPR039518 WhiA, LAGLIDADG-like domain GYO_3810 aaef2b87adfd55e9e4ac30df323aabce 316 SUPERFAMILY SSF55608 120 221 5.27E-19 T 14-10-2018 IPR027434 Homing endonuclease GYO_2364 21f35fbf216f4b66a6f55f67a24c7a98 466 SMART SM00245 176 364 1.4E-81 T 14-10-2018 IPR005151 Tail specific protease GO:0006508|GO:0008236 Reactome: R-HSA-2187335|Reactome: R-HSA-2453902 GYO_2364 21f35fbf216f4b66a6f55f67a24c7a98 466 Pfam PF03572 Peptidase family S41 201 362 1.5E-49 T 14-10-2018 IPR005151 Tail specific protease GO:0006508|GO:0008236 Reactome: R-HSA-2187335|Reactome: R-HSA-2453902 GYO_2364 21f35fbf216f4b66a6f55f67a24c7a98 466 Gene3D G3DSA:1.10.101.10 373 452 1.4E-10 T 14-10-2018 IPR036366 PGBD superfamily Reactome: R-HSA-1442490|Reactome: R-HSA-1474228 GYO_2364 21f35fbf216f4b66a6f55f67a24c7a98 466 Gene3D G3DSA:2.30.42.10 104 190 5.2E-96 T 14-10-2018 GYO_2364 21f35fbf216f4b66a6f55f67a24c7a98 466 SMART SM00228 104 175 7.9E-19 T 14-10-2018 IPR001478 PDZ domain GO:0005515 GYO_2364 21f35fbf216f4b66a6f55f67a24c7a98 466 Pfam PF00595 PDZ domain (Also known as DHR or GLGF) 104 171 2.0E-14 T 14-10-2018 IPR001478 PDZ domain GO:0005515 GYO_2364 21f35fbf216f4b66a6f55f67a24c7a98 466 SUPERFAMILY SSF50156 97 175 1.73E-17 T 14-10-2018 IPR036034 PDZ superfamily GO:0005515 GYO_2364 21f35fbf216f4b66a6f55f67a24c7a98 466 Gene3D G3DSA:3.30.750.44 49 339 5.2E-96 T 14-10-2018 GYO_2364 21f35fbf216f4b66a6f55f67a24c7a98 466 Pfam PF01471 Putative peptidoglycan binding domain 385 440 1.5E-9 T 14-10-2018 IPR002477 Peptidoglycan binding-like GYO_2364 21f35fbf216f4b66a6f55f67a24c7a98 466 TIGRFAM TIGR00225 prc: C-terminal processing peptidase 55 381 9.3E-131 T 14-10-2018 IPR004447 C-terminal-processing peptidase S41A GO:0006508|GO:0008236 GYO_2364 21f35fbf216f4b66a6f55f67a24c7a98 466 Gene3D G3DSA:3.90.226.10 191 361 5.2E-96 T 14-10-2018 GYO_2364 21f35fbf216f4b66a6f55f67a24c7a98 466 SUPERFAMILY SSF47090 375 443 7.46E-11 T 14-10-2018 IPR036365 PGBD-like superfamily GYO_2364 21f35fbf216f4b66a6f55f67a24c7a98 466 SUPERFAMILY SSF52096 40 368 1.61E-72 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily GYO_2155 43b0866599ed9e5f72b18bb9c7b3ce41 77 Hamap MF_01103 UPF0291 protein . 2 60 16.349 T 14-10-2018 IPR009242 Protein of unknown function DUF896 GYO_2155 43b0866599ed9e5f72b18bb9c7b3ce41 77 SUPERFAMILY SSF158221 1 42 3.4E-13 T 14-10-2018 GYO_2155 43b0866599ed9e5f72b18bb9c7b3ce41 77 Gene3D G3DSA:1.10.287.540 1 56 9.4E-27 T 14-10-2018 GYO_2155 43b0866599ed9e5f72b18bb9c7b3ce41 77 Pfam PF05979 Bacterial protein of unknown function (DUF896) 6 68 5.0E-31 T 14-10-2018 IPR009242 Protein of unknown function DUF896 GYO_1952 60c955a73a97d0f2e5287a35cbc6b72b 174 Hamap MF_00014 Ribosome maturation factor RimM [rimM]. 5 171 23.296 T 14-10-2018 IPR011961 16S rRNA processing protein RimM GO:0005840|GO:0006364|GO:0043022 GYO_1952 60c955a73a97d0f2e5287a35cbc6b72b 174 Pfam PF01782 RimM N-terminal domain 8 92 6.1E-21 T 14-10-2018 IPR002676 RimM, N-terminal GO:0006364 GYO_1952 60c955a73a97d0f2e5287a35cbc6b72b 174 SUPERFAMILY SSF50447 5 93 9.42E-21 T 14-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily GYO_1952 60c955a73a97d0f2e5287a35cbc6b72b 174 SUPERFAMILY SSF50346 101 171 9.61E-20 T 14-10-2018 IPR011033 PRC-barrel-like superfamily GYO_1952 60c955a73a97d0f2e5287a35cbc6b72b 174 Gene3D G3DSA:2.40.30.60 6 94 9.6E-19 T 14-10-2018 IPR036976 RimM, N-terminal domain superfamily GO:0006364 GYO_1952 60c955a73a97d0f2e5287a35cbc6b72b 174 Gene3D G3DSA:2.30.30.240 96 174 6.9E-22 T 14-10-2018 GYO_1952 60c955a73a97d0f2e5287a35cbc6b72b 174 Pfam PF05239 PRC-barrel domain 98 171 7.2E-14 T 14-10-2018 IPR027275 PRC-barrel domain GYO_1952 60c955a73a97d0f2e5287a35cbc6b72b 174 TIGRFAM TIGR02273 16S_RimM: 16S rRNA processing protein RimM 5 171 1.1E-50 T 14-10-2018 IPR011961 16S rRNA processing protein RimM GO:0005840|GO:0006364|GO:0043022 GYO_3579 d7c3fd012a0180fd305cac69e7702030 106 Pfam PF00085 Thioredoxin 13 82 3.1E-11 T 14-10-2018 IPR013766 Thioredoxin domain GO:0045454 GYO_3579 d7c3fd012a0180fd305cac69e7702030 106 Gene3D G3DSA:3.40.30.10 1 100 6.1E-16 T 14-10-2018 GYO_3579 d7c3fd012a0180fd305cac69e7702030 106 SUPERFAMILY SSF52833 13 99 5.12E-19 T 14-10-2018 IPR036249 Thioredoxin-like superfamily GYO_0574 3c72c12a4b6651b5e706b28d3fa64c7b 247 ProSitePatterns PS00211 ABC transporters family signature. 141 155 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 GYO_0574 3c72c12a4b6651b5e706b28d3fa64c7b 247 SMART SM00382 26 223 7.5E-14 T 14-10-2018 IPR003593 AAA+ ATPase domain GYO_0574 3c72c12a4b6651b5e706b28d3fa64c7b 247 Gene3D G3DSA:3.40.50.300 1 245 6.1E-75 T 14-10-2018 GYO_0574 3c72c12a4b6651b5e706b28d3fa64c7b 247 Pfam PF00005 ABC transporter 17 169 2.3E-34 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 GYO_0574 3c72c12a4b6651b5e706b28d3fa64c7b 247 SUPERFAMILY SSF52540 1 239 9.38E-78 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase GYO_0574 3c72c12a4b6651b5e706b28d3fa64c7b 247 PIRSF PIRSF039085 1 245 4.0E-113 T 14-10-2018 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 GYO_4384 667a22ede94f7629e607c9a5bcab4ccd 251 Pfam PF00455 DeoR C terminal sensor domain 73 230 8.5E-51 T 14-10-2018 IPR014036 DeoR C-terminal sensor domain GYO_4384 667a22ede94f7629e607c9a5bcab4ccd 251 SMART SM01134 71 232 9.6E-61 T 14-10-2018 GYO_4384 667a22ede94f7629e607c9a5bcab4ccd 251 SUPERFAMILY SSF46785 5 62 2.77E-12 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily GYO_4384 667a22ede94f7629e607c9a5bcab4ccd 251 ProSitePatterns PS00894 DeoR-type HTH domain signature. 5 39 - T 14-10-2018 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 GYO_4384 667a22ede94f7629e607c9a5bcab4ccd 251 Gene3D G3DSA:1.10.10.10 2 54 1.4E-6 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily GYO_4384 667a22ede94f7629e607c9a5bcab4ccd 251 Pfam PF08220 DeoR-like helix-turn-helix domain 5 61 1.9E-22 T 14-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 GYO_4384 667a22ede94f7629e607c9a5bcab4ccd 251 SMART SM00420 5 57 3.6E-24 T 14-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 GYO_4384 667a22ede94f7629e607c9a5bcab4ccd 251 SUPERFAMILY SSF100950 72 232 3.14E-32 T 14-10-2018 IPR037171 NagB/RpiA transferase-like GYO_4384 667a22ede94f7629e607c9a5bcab4ccd 251 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 37 55 1.2E-7 T 14-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 GYO_4384 667a22ede94f7629e607c9a5bcab4ccd 251 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 23 37 1.2E-7 T 14-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 GYO_2293 1306ecd657707657722069c9748f1143 333 Gene3D G3DSA:3.40.1190.20 2 332 2.1E-99 T 14-10-2018 IPR029056 Ribokinase-like GYO_2293 1306ecd657707657722069c9748f1143 333 SUPERFAMILY SSF53613 5 324 1.12E-80 T 14-10-2018 IPR029056 Ribokinase-like GYO_2293 1306ecd657707657722069c9748f1143 333 Pfam PF00294 pfkB family carbohydrate kinase 5 315 7.9E-71 T 14-10-2018 IPR011611 Carbohydrate kinase PfkB GYO_2293 1306ecd657707657722069c9748f1143 333 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 256 269 - T 14-10-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 GYO_2293 1306ecd657707657722069c9748f1143 333 PRINTS PR00990 Ribokinase signature 187 202 1.4E-5 T 14-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 GYO_2293 1306ecd657707657722069c9748f1143 333 PRINTS PR00990 Ribokinase signature 226 237 1.4E-5 T 14-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 GYO_2293 1306ecd657707657722069c9748f1143 333 PRINTS PR00990 Ribokinase signature 32 51 1.4E-5 T 14-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 GYO_1172 9f3a8a2a18982bbc1fe7c27aa95615a2 380 SUPERFAMILY SSF51679 3 349 9.94E-102 T 14-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 GYO_1172 9f3a8a2a18982bbc1fe7c27aa95615a2 380 TIGRFAM TIGR03565 alk_sulf_monoox: alkanesulfonate monooxygenase, FMNH(2)-dependent 4 349 1.3E-192 T 14-10-2018 IPR019911 Alkanesulphonate monooxygenase, FMN-dependent GO:0008726|GO:0055114 KEGG: 00920+1.14.14.5 GYO_1172 9f3a8a2a18982bbc1fe7c27aa95615a2 380 Pfam PF00296 Luciferase-like monooxygenase 3 325 2.3E-90 T 14-10-2018 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 GYO_1172 9f3a8a2a18982bbc1fe7c27aa95615a2 380 Hamap MF_01229 Alkanesulfonate monooxygenase [ssuD]. 3 376 78.359 T 14-10-2018 IPR019911 Alkanesulphonate monooxygenase, FMN-dependent GO:0008726|GO:0055114 KEGG: 00920+1.14.14.5 GYO_1172 9f3a8a2a18982bbc1fe7c27aa95615a2 380 Gene3D G3DSA:3.20.20.30 1 361 3.6E-148 T 14-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 GYO_2891 f1636b20c399339d7f3ed7e28027c902 188 Gene3D G3DSA:2.60.120.10 42 182 1.8E-38 T 14-10-2018 IPR014710 RmlC-like jelly roll fold GYO_2891 f1636b20c399339d7f3ed7e28027c902 188 SUPERFAMILY SSF51182 5 175 1.1E-37 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily GYO_2891 f1636b20c399339d7f3ed7e28027c902 188 Pfam PF05995 Cysteine dioxygenase type I 65 161 3.3E-10 T 14-10-2018 IPR010300 Cysteine dioxygenase type I GO:0005506|GO:0016702|GO:0055114 KEGG: 00270+1.13.11.20|KEGG: 00430+1.13.11.20|MetaCyc: PWY-5331|Reactome: R-HSA-1614558 GYO_1183 c4899e1659c68f2e4e9b56bb22403d8a 237 Pfam PF04519 Polymer-forming cytoskeletal 63 136 4.1E-9 T 14-10-2018 IPR007607 Bactofilin A/B GYO_1183 c4899e1659c68f2e4e9b56bb22403d8a 237 Pfam PF04519 Polymer-forming cytoskeletal 5 78 3.5E-8 T 14-10-2018 IPR007607 Bactofilin A/B GYO_1183 c4899e1659c68f2e4e9b56bb22403d8a 237 Pfam PF04519 Polymer-forming cytoskeletal 46 120 3.5E-11 T 14-10-2018 IPR007607 Bactofilin A/B GYO_3784 fa88f890371f71ca0dfc172c579730d5 111 Pfam PF00893 Small Multidrug Resistance protein 1 89 2.2E-24 T 14-10-2018 IPR000390 Small multidrug resistance protein family GO:0016021 GYO_3784 fa88f890371f71ca0dfc172c579730d5 111 SUPERFAMILY SSF103481 6 100 1.44E-12 T 14-10-2018 GYO_3784 fa88f890371f71ca0dfc172c579730d5 111 Gene3D G3DSA:1.10.3730.20 1 105 5.2E-20 T 14-10-2018 GYO_0337 bdcf8b935f8bc1fc133a0cd9f50242bd 351 SUPERFAMILY SSF51445 25 294 2.11E-11 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily GYO_0258 bdcf8b935f8bc1fc133a0cd9f50242bd 351 SUPERFAMILY SSF51445 25 294 2.11E-11 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily GYO_2581 8f73fef98b70c7d6e59946b8a3796eb2 117 Pfam PF01740 STAS domain 5 109 1.2E-26 T 14-10-2018 IPR002645 STAS domain GYO_2581 8f73fef98b70c7d6e59946b8a3796eb2 117 SUPERFAMILY SSF52091 4 113 2.55E-31 T 14-10-2018 IPR036513 STAS domain superfamily GYO_2581 8f73fef98b70c7d6e59946b8a3796eb2 117 TIGRFAM TIGR00377 ant_ant_sig: anti-anti-sigma factor 1 107 8.3E-41 T 14-10-2018 IPR003658 Anti-sigma factor antagonist GO:0006355|GO:0045152 GYO_2581 8f73fef98b70c7d6e59946b8a3796eb2 117 TIGRFAM TIGR02886 spore_II_AA: anti-sigma F factor antagonist 5 110 4.3E-47 T 14-10-2018 IPR014237 Anti-sigma F factor antagonist GO:0006355|GO:0030435|GO:0045152 GYO_2581 8f73fef98b70c7d6e59946b8a3796eb2 117 Gene3D G3DSA:3.30.750.24 2 117 1.3E-34 T 14-10-2018 IPR036513 STAS domain superfamily GYO_0798 1e7adfbf8ccc7d69923b1167f2f1b7ac 143 Pfam PF00011 Hsp20/alpha crystallin family 49 135 2.7E-8 T 14-10-2018 IPR002068 Alpha crystallin/Hsp20 domain GYO_0798 1e7adfbf8ccc7d69923b1167f2f1b7ac 143 Gene3D G3DSA:2.60.40.790 10 138 3.3E-14 T 14-10-2018 IPR008978 HSP20-like chaperone GYO_0798 1e7adfbf8ccc7d69923b1167f2f1b7ac 143 SUPERFAMILY SSF49764 38 133 6.63E-15 T 14-10-2018 IPR008978 HSP20-like chaperone GYO_3161 4089baa619628296c1b551771187c475 579 Gene3D G3DSA:3.30.565.10 427 578 1.0E-51 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily GYO_3161 4089baa619628296c1b551771187c475 579 SMART SM00091 234 300 2.8E-4 T 14-10-2018 IPR000014 PAS domain GYO_3161 4089baa619628296c1b551771187c475 579 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 463 573 7.2E-31 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase GYO_3161 4089baa619628296c1b551771187c475 579 SMART SM00388 350 417 1.1E-24 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 GYO_3161 4089baa619628296c1b551771187c475 579 Gene3D G3DSA:3.30.450.20 222 345 1.4E-15 T 14-10-2018 GYO_3161 4089baa619628296c1b551771187c475 579 SUPERFAMILY SSF55874 406 573 8.12E-52 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily GYO_3161 4089baa619628296c1b551771187c475 579 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 233 350 1.3E-6 T 14-10-2018 IPR000014 PAS domain GYO_3161 4089baa619628296c1b551771187c475 579 Gene3D G3DSA:1.10.287.130 346 421 6.6E-28 T 14-10-2018 GYO_3161 4089baa619628296c1b551771187c475 579 Pfam PF00512 His Kinase A (phospho-acceptor) domain 350 416 2.5E-21 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 GYO_3161 4089baa619628296c1b551771187c475 579 SUPERFAMILY SSF55785 223 342 1.12E-10 T 14-10-2018 IPR035965 PAS domain superfamily GYO_3161 4089baa619628296c1b551771187c475 579 Pfam PF16736 Single Cache-like 35 140 9.0E-30 T 14-10-2018 IPR031967 PhoR, single Cache-like domain GYO_3161 4089baa619628296c1b551771187c475 579 SUPERFAMILY SSF47384 336 418 7.46E-22 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 GYO_3161 4089baa619628296c1b551771187c475 579 Gene3D G3DSA:3.30.450.20 29 150 5.0E-64 T 14-10-2018 GYO_3161 4089baa619628296c1b551771187c475 579 PRINTS PR00344 Bacterial sensor protein C-terminal signature 518 528 4.1E-20 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 GYO_3161 4089baa619628296c1b551771187c475 579 PRINTS PR00344 Bacterial sensor protein C-terminal signature 559 572 4.1E-20 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 GYO_3161 4089baa619628296c1b551771187c475 579 PRINTS PR00344 Bacterial sensor protein C-terminal signature 500 514 4.1E-20 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 GYO_3161 4089baa619628296c1b551771187c475 579 PRINTS PR00344 Bacterial sensor protein C-terminal signature 535 553 4.1E-20 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 GYO_3161 4089baa619628296c1b551771187c475 579 SMART SM00387 463 575 4.9E-43 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase GYO_3161 4089baa619628296c1b551771187c475 579 Pfam PF00989 PAS fold 237 341 3.2E-16 T 14-10-2018 IPR013767 PAS fold GO:0006355 GYO_3396 5007338faf24edecb29efff87d05ed95 69 SUPERFAMILY SSF56349 2 63 7.06E-17 T 14-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 GYO_3396 5007338faf24edecb29efff87d05ed95 69 Gene3D G3DSA:1.10.443.10 1 67 1.8E-19 T 14-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 GYO_3396 5007338faf24edecb29efff87d05ed95 69 Pfam PF00589 Phage integrase family 2 51 4.8E-10 T 14-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 GYO_1962 e0661b7e24a26f0ac2031ef4964c4e61 300 TIGRFAM TIGR01019 sucCoAalpha: succinate-CoA ligase, alpha subunit 4 288 5.8E-151 T 14-10-2018 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 GYO_1962 e0661b7e24a26f0ac2031ef4964c4e61 300 Pfam PF00549 CoA-ligase 151 268 8.1E-19 T 14-10-2018 IPR005811 ATP-citrate lyase/succinyl-CoA ligase GO:0003824 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 GYO_1962 e0661b7e24a26f0ac2031ef4964c4e61 300 ProSitePatterns PS00399 ATP-citrate lyase / succinyl-CoA ligases family active site. 236 249 - T 14-10-2018 IPR017440 ATP-citrate lyase/succinyl-CoA ligase, active site GYO_1962 e0661b7e24a26f0ac2031ef4964c4e61 300 Gene3D G3DSA:3.40.50.261 124 289 1.1E-72 T 14-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 GYO_1962 e0661b7e24a26f0ac2031ef4964c4e61 300 ProSitePatterns PS01216 ATP-citrate lyase / succinyl-CoA ligases family signature 1. 152 181 - T 14-10-2018 IPR033847 ATP-citrate lyase/succinyl-CoA ligase, conserved site GYO_1962 e0661b7e24a26f0ac2031ef4964c4e61 300 Pfam PF02629 CoA binding domain 6 99 3.9E-31 T 14-10-2018 IPR003781 CoA-binding GO:0048037 GYO_1962 e0661b7e24a26f0ac2031ef4964c4e61 300 PIRSF PIRSF001553 1 291 5.5E-135 T 14-10-2018 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 GYO_1962 e0661b7e24a26f0ac2031ef4964c4e61 300 PRINTS PR01798 Succinyl-CoA synthase signature 82 99 1.9E-40 T 14-10-2018 GYO_1962 e0661b7e24a26f0ac2031ef4964c4e61 300 PRINTS PR01798 Succinyl-CoA synthase signature 177 195 1.9E-40 T 14-10-2018 GYO_1962 e0661b7e24a26f0ac2031ef4964c4e61 300 PRINTS PR01798 Succinyl-CoA synthase signature 208 221 1.9E-40 T 14-10-2018 GYO_1962 e0661b7e24a26f0ac2031ef4964c4e61 300 PRINTS PR01798 Succinyl-CoA synthase signature 240 257 1.9E-40 T 14-10-2018 GYO_1962 e0661b7e24a26f0ac2031ef4964c4e61 300 Hamap MF_01988 Succinate--CoA ligase [ADP-forming] subunit alpha [sucD]. 1 288 43.943 T 14-10-2018 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 GYO_1962 e0661b7e24a26f0ac2031ef4964c4e61 300 SUPERFAMILY SSF52210 123 287 4.19E-55 T 14-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 GYO_1962 e0661b7e24a26f0ac2031ef4964c4e61 300 SMART SM00881 4 100 3.3E-35 T 14-10-2018 IPR003781 CoA-binding GO:0048037 GYO_1962 e0661b7e24a26f0ac2031ef4964c4e61 300 SUPERFAMILY SSF51735 1 122 9.01E-44 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily GYO_1962 e0661b7e24a26f0ac2031ef4964c4e61 300 Gene3D G3DSA:3.40.50.720 1 123 2.2E-52 T 14-10-2018 GYO_0740 4b0399e1e12b6acfb92c01fa3887c5be 290 SMART SM00342 21 104 1.9E-28 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 GYO_0740 4b0399e1e12b6acfb92c01fa3887c5be 290 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 58 100 - T 14-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 GYO_0740 4b0399e1e12b6acfb92c01fa3887c5be 290 SMART SM00871 128 288 1.0E-35 T 14-10-2018 IPR010499 Bacterial transcription activator, effector binding GYO_0740 4b0399e1e12b6acfb92c01fa3887c5be 290 Pfam PF06445 GyrI-like small molecule binding domain 128 287 2.4E-31 T 14-10-2018 IPR029442 GyrI-like small molecule binding domain GYO_0740 4b0399e1e12b6acfb92c01fa3887c5be 290 Gene3D G3DSA:1.10.10.60 2 57 7.4E-15 T 14-10-2018 GYO_0740 4b0399e1e12b6acfb92c01fa3887c5be 290 Gene3D G3DSA:3.20.80.10 128 290 8.2E-41 T 14-10-2018 IPR011256 Regulatory factor, effector binding domain superfamily GYO_0740 4b0399e1e12b6acfb92c01fa3887c5be 290 SUPERFAMILY SSF46689 5 55 6.27E-9 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 GYO_0740 4b0399e1e12b6acfb92c01fa3887c5be 290 SUPERFAMILY SSF55136 128 290 3.4E-31 T 14-10-2018 IPR011256 Regulatory factor, effector binding domain superfamily GYO_0740 4b0399e1e12b6acfb92c01fa3887c5be 290 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 73 88 2.9E-5 T 14-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 GYO_0740 4b0399e1e12b6acfb92c01fa3887c5be 290 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 88 104 2.9E-5 T 14-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 GYO_0740 4b0399e1e12b6acfb92c01fa3887c5be 290 SUPERFAMILY SSF46689 57 111 2.82E-11 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 GYO_0740 4b0399e1e12b6acfb92c01fa3887c5be 290 Gene3D G3DSA:1.10.10.60 58 116 2.9E-13 T 14-10-2018 GYO_0740 4b0399e1e12b6acfb92c01fa3887c5be 290 Pfam PF12833 Helix-turn-helix domain 28 104 5.6E-17 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 GYO_3974 617ef0e60cb2ea34e9b439770e71bd20 288 SUPERFAMILY SSF51215 17 169 4.97E-14 T 14-10-2018 IPR037923 Transcription regulator HTH-like GYO_3974 617ef0e60cb2ea34e9b439770e71bd20 288 Pfam PF12833 Helix-turn-helix domain 207 280 5.3E-15 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 GYO_3974 617ef0e60cb2ea34e9b439770e71bd20 288 Gene3D G3DSA:1.10.10.60 179 231 7.0E-9 T 14-10-2018 GYO_3974 617ef0e60cb2ea34e9b439770e71bd20 288 SMART SM00342 201 281 5.5E-17 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 GYO_3974 617ef0e60cb2ea34e9b439770e71bd20 288 SUPERFAMILY SSF46689 237 283 2.42E-10 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 GYO_3974 617ef0e60cb2ea34e9b439770e71bd20 288 Gene3D G3DSA:1.10.10.60 232 286 3.8E-15 T 14-10-2018 GYO_3974 617ef0e60cb2ea34e9b439770e71bd20 288 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 250 265 8.2E-6 T 14-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 GYO_3974 617ef0e60cb2ea34e9b439770e71bd20 288 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 265 281 8.2E-6 T 14-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 GYO_3511 69b5587f32722d715469123841b84d43 404 TIGRFAM TIGR00804 nupC: nucleoside transporter, NupC family 4 403 7.6E-145 T 14-10-2018 IPR018270 Concentrative nucleoside transporter, metazoan/bacterial GO:0005337|GO:0016020|GO:1901642 Reactome: R-HSA-83936 GYO_3511 69b5587f32722d715469123841b84d43 404 Pfam PF07662 Na+ dependent nucleoside transporter C-terminus 194 403 3.3E-75 T 14-10-2018 IPR011657 Concentrative nucleoside transporter C-terminal domain Reactome: R-HSA-83936 GYO_3511 69b5587f32722d715469123841b84d43 404 Pfam PF07670 Nucleoside recognition 92 185 1.1E-5 T 14-10-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 GYO_3511 69b5587f32722d715469123841b84d43 404 Pfam PF01773 Na+ dependent nucleoside transporter N-terminus 8 81 1.6E-24 T 14-10-2018 IPR002668 Concentrative nucleoside transporter N-terminal domain Reactome: R-HSA-83936 GYO_2884 10fe61b2f044e6ac41ab171ad768aed8 282 Pfam PF00874 PRD domain 183 274 3.1E-16 T 14-10-2018 IPR011608 PRD domain GO:0006355 GYO_2884 10fe61b2f044e6ac41ab171ad768aed8 282 Pfam PF00874 PRD domain 77 163 1.0E-19 T 14-10-2018 IPR011608 PRD domain GO:0006355 GYO_2884 10fe61b2f044e6ac41ab171ad768aed8 282 SUPERFAMILY SSF63520 61 168 3.66E-28 T 14-10-2018 IPR036634 PRD domain superfamily GO:0006355 GYO_2884 10fe61b2f044e6ac41ab171ad768aed8 282 Gene3D G3DSA:1.10.1790.10 67 167 1.1E-31 T 14-10-2018 GYO_2884 10fe61b2f044e6ac41ab171ad768aed8 282 SUPERFAMILY SSF50151 3 53 3.27E-13 T 14-10-2018 IPR036650 CAT RNA-binding domain superfamily GO:0003723 GYO_2884 10fe61b2f044e6ac41ab171ad768aed8 282 SUPERFAMILY SSF63520 173 276 2.22E-26 T 14-10-2018 IPR036634 PRD domain superfamily GO:0006355 GYO_2884 10fe61b2f044e6ac41ab171ad768aed8 282 Pfam PF03123 CAT RNA binding domain 3 51 4.2E-16 T 14-10-2018 IPR004341 CAT RNA-binding domain GO:0003723 GYO_2884 10fe61b2f044e6ac41ab171ad768aed8 282 SMART SM01061 2 60 2.8E-17 T 14-10-2018 IPR004341 CAT RNA-binding domain GO:0003723 GYO_2884 10fe61b2f044e6ac41ab171ad768aed8 282 Gene3D G3DSA:2.30.24.10 1 66 4.4E-17 T 14-10-2018 IPR036650 CAT RNA-binding domain superfamily GO:0003723 GYO_2884 10fe61b2f044e6ac41ab171ad768aed8 282 Gene3D G3DSA:1.10.1790.10 170 278 5.3E-30 T 14-10-2018 GYO_1487 c61fa9a8eae3fc9a27564f51921c23f9 52 Pfam PF09680 Protein of unknown function (Tiny_TM_bacill) 27 50 1.7E-11 T 14-10-2018 IPR010070 Sporulation protein YjcZ-like GYO_1487 c61fa9a8eae3fc9a27564f51921c23f9 52 TIGRFAM TIGR01732 tiny_TM_bacill: conserved hypothetical protein 25 50 5.9E-6 T 14-10-2018 IPR010070 Sporulation protein YjcZ-like GYO_1394 5ae02c806d77f0c7672d33a30a4eb674 481 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 37 51 2.3E-7 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 GYO_1394 5ae02c806d77f0c7672d33a30a4eb674 481 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 51 67 2.3E-7 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 GYO_1394 5ae02c806d77f0c7672d33a30a4eb674 481 Gene3D G3DSA:1.10.10.10 2 78 3.4E-21 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily GYO_1394 5ae02c806d77f0c7672d33a30a4eb674 481 Pfam PF00155 Aminotransferase class I and II 120 467 1.6E-36 T 14-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 GYO_1394 5ae02c806d77f0c7672d33a30a4eb674 481 SUPERFAMILY SSF53383 96 478 6.26E-93 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase GYO_1394 5ae02c806d77f0c7672d33a30a4eb674 481 SUPERFAMILY SSF46785 7 88 9.11E-21 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily GYO_1394 5ae02c806d77f0c7672d33a30a4eb674 481 SMART SM00345 18 77 2.5E-16 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 GYO_1394 5ae02c806d77f0c7672d33a30a4eb674 481 Gene3D G3DSA:3.40.640.10 154 373 1.5E-106 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 GYO_1394 5ae02c806d77f0c7672d33a30a4eb674 481 Gene3D G3DSA:3.90.1150.10 118 471 1.5E-106 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 GYO_1394 5ae02c806d77f0c7672d33a30a4eb674 481 Pfam PF00392 Bacterial regulatory proteins, gntR family 16 77 6.2E-17 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 GYO_1708 def0f62f9ade46bb3d77b33f2b6018d0 311 Gene3D G3DSA:3.10.50.10 208 270 4.1E-90 T 14-10-2018 IPR029070 Chitinase insertion domain superfamily GYO_1708 def0f62f9ade46bb3d77b33f2b6018d0 311 SMART SM00636 2 299 1.9E-12 T 14-10-2018 IPR011583 Chitinase II GO:0008061 GYO_1708 def0f62f9ade46bb3d77b33f2b6018d0 311 Gene3D G3DSA:3.20.20.80 26 304 4.1E-90 T 14-10-2018 GYO_1708 def0f62f9ade46bb3d77b33f2b6018d0 311 SUPERFAMILY SSF51445 16 305 7.48E-45 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily GYO_1708 def0f62f9ade46bb3d77b33f2b6018d0 311 Pfam PF00704 Glycosyl hydrolases family 18 80 298 3.4E-32 T 14-10-2018 IPR001223 Glycoside hydrolase family 18, catalytic domain GO:0005975 GYO_1725 c8e59674ba8b932e1faabe28bea5ac71 570 Pfam PF02896 PEP-utilising enzyme, TIM barrel domain 250 540 2.5E-129 T 14-10-2018 IPR000121 PEP-utilising enzyme, C-terminal GO:0016310|GO:0016772 GYO_1725 c8e59674ba8b932e1faabe28bea5ac71 570 Pfam PF00391 PEP-utilising enzyme, mobile domain 153 225 4.5E-24 T 14-10-2018 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 GYO_1725 c8e59674ba8b932e1faabe28bea5ac71 570 SUPERFAMILY SSF52009 125 246 1.11E-37 T 14-10-2018 IPR036637 Phosphohistidine domain superfamily GO:0016310|GO:0016772 GYO_1725 c8e59674ba8b932e1faabe28bea5ac71 570 ProSitePatterns PS00742 PEP-utilizing enzymes signature 2. 447 465 - T 14-10-2018 IPR023151 PEP-utilising enzyme, conserved site GO:0016772 GYO_1725 c8e59674ba8b932e1faabe28bea5ac71 570 PIRSF PIRSF000732 1 570 8.2E-229 T 14-10-2018 IPR024692 Phosphotransferase system, enzyme I GO:0008965|GO:0009401 GYO_1725 c8e59674ba8b932e1faabe28bea5ac71 570 ProSitePatterns PS00370 PEP-utilizing enzymes phosphorylation site signature. 184 195 - T 14-10-2018 IPR018274 PEP-utilising enzyme, active site GO:0016310|GO:0016772 GYO_1725 c8e59674ba8b932e1faabe28bea5ac71 570 Gene3D G3DSA:1.10.274.10 23 146 1.6E-81 T 14-10-2018 IPR036618 PtsI, HPr-binding domain superfamily GO:0009401 GYO_1725 c8e59674ba8b932e1faabe28bea5ac71 570 SUPERFAMILY SSF47831 23 143 5.62E-37 T 14-10-2018 IPR036618 PtsI, HPr-binding domain superfamily GO:0009401 GYO_1725 c8e59674ba8b932e1faabe28bea5ac71 570 Gene3D G3DSA:3.50.30.10 6 234 1.6E-81 T 14-10-2018 GYO_1725 c8e59674ba8b932e1faabe28bea5ac71 570 Gene3D G3DSA:3.20.20.60 235 570 2.1E-127 T 14-10-2018 GYO_1725 c8e59674ba8b932e1faabe28bea5ac71 570 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 293 312 1.2E-32 T 14-10-2018 GYO_1725 c8e59674ba8b932e1faabe28bea5ac71 570 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 464 479 1.2E-32 T 14-10-2018 GYO_1725 c8e59674ba8b932e1faabe28bea5ac71 570 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 500 512 1.2E-32 T 14-10-2018 GYO_1725 c8e59674ba8b932e1faabe28bea5ac71 570 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 447 462 1.2E-32 T 14-10-2018 GYO_1725 c8e59674ba8b932e1faabe28bea5ac71 570 TIGRFAM TIGR01417 PTS_I_fam: phosphoenolpyruvate-protein phosphotransferase 4 566 1.6E-279 T 14-10-2018 IPR006318 Phosphotransferase system, enzyme I-like GO:0016772 GYO_1725 c8e59674ba8b932e1faabe28bea5ac71 570 SUPERFAMILY SSF51621 249 547 9.95E-113 T 14-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 GYO_1725 c8e59674ba8b932e1faabe28bea5ac71 570 Pfam PF05524 PEP-utilising enzyme, N-terminal 5 126 2.2E-34 T 14-10-2018 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 GYO_0351 871dbe936d28f16586679cdc5daa93e2 248 Pfam PF00756 Putative esterase 11 240 7.9E-26 T 14-10-2018 IPR000801 Putative esterase Reactome: R-HSA-156590 GYO_0351 871dbe936d28f16586679cdc5daa93e2 248 Gene3D G3DSA:3.40.50.1820 6 247 4.1E-49 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold GYO_0351 871dbe936d28f16586679cdc5daa93e2 248 SUPERFAMILY SSF53474 10 244 2.15E-45 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold GYO_1931 2af73738394c52b480c8e3028bcbe549 214 Pfam PF04265 Thiamin pyrophosphokinase, vitamin B1 binding domain 145 207 1.1E-15 T 14-10-2018 IPR007373 Thiamin pyrophosphokinase, thiamin-binding domain GO:0009229|GO:0030975 KEGG: 00730+2.7.6.2|MetaCyc: PWY-6898|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|Reactome: R-HSA-196819 GYO_1931 2af73738394c52b480c8e3028bcbe549 214 SMART SM00983 142 208 2.8E-23 T 14-10-2018 IPR007373 Thiamin pyrophosphokinase, thiamin-binding domain GO:0009229|GO:0030975 KEGG: 00730+2.7.6.2|MetaCyc: PWY-6898|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|Reactome: R-HSA-196819 GYO_1931 2af73738394c52b480c8e3028bcbe549 214 SUPERFAMILY SSF63999 1 130 2.75E-35 T 14-10-2018 IPR036759 Thiamin pyrophosphokinase, catalytic domain superfamily GO:0004788|GO:0005524|GO:0009229 KEGG: 00730+2.7.6.2|MetaCyc: PWY-6898|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|Reactome: R-HSA-196819 GYO_1931 2af73738394c52b480c8e3028bcbe549 214 SUPERFAMILY SSF63862 133 212 2.09E-15 T 14-10-2018 IPR036371 Thiamin pyrophosphokinase, thiamin-binding domain superfamily GO:0009229 KEGG: 00730+2.7.6.2|MetaCyc: PWY-6898|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|Reactome: R-HSA-196819 GYO_1931 2af73738394c52b480c8e3028bcbe549 214 Gene3D G3DSA:3.40.50.10240 1 214 2.4E-84 T 14-10-2018 IPR036759 Thiamin pyrophosphokinase, catalytic domain superfamily GO:0004788|GO:0005524|GO:0009229 KEGG: 00730+2.7.6.2|MetaCyc: PWY-6898|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|Reactome: R-HSA-196819 GYO_1931 2af73738394c52b480c8e3028bcbe549 214 Pfam PF04263 Thiamin pyrophosphokinase, catalytic domain 22 128 2.3E-21 T 14-10-2018 IPR007371 Thiamin pyrophosphokinase, catalytic domain GO:0004788|GO:0005524|GO:0009229 KEGG: 00730+2.7.6.2|MetaCyc: PWY-6898|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|Reactome: R-HSA-196819 GYO_1931 2af73738394c52b480c8e3028bcbe549 214 TIGRFAM TIGR01378 thi_PPkinase: thiamine pyrophosphokinase 4 210 2.1E-71 T 14-10-2018 IPR006282 Thiamin pyrophosphokinase GO:0004788|GO:0006772 KEGG: 00730+2.7.6.2|MetaCyc: PWY-6898|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|Reactome: R-HSA-196819 GYO_0631 7a3db70758db9b39d753a91c6da3af50 129 Gene3D G3DSA:3.30.70.100 33 129 9.6E-37 T 14-10-2018 GYO_0631 7a3db70758db9b39d753a91c6da3af50 129 SUPERFAMILY SSF54909 25 129 2.15E-28 T 14-10-2018 IPR011008 Dimeric alpha-beta barrel GYO_0631 7a3db70758db9b39d753a91c6da3af50 129 Pfam PF03992 Antibiotic biosynthesis monooxygenase 35 110 2.2E-12 T 14-10-2018 IPR007138 Antibiotic biosynthesis monooxygenase domain GYO_0958 aea285680b4d100748e09f9d53964745 301 Gene3D G3DSA:1.10.3720.10 51 293 8.0E-65 T 14-10-2018 IPR035906 MetI-like superfamily GYO_0958 aea285680b4d100748e09f9d53964745 301 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 88 287 1.3E-12 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 GYO_0958 aea285680b4d100748e09f9d53964745 301 SUPERFAMILY SSF161098 55 285 3.66E-54 T 14-10-2018 IPR035906 MetI-like superfamily GYO_0886 cf95936bec3fa350118c8ddea8844f2c 329 Pfam PF13170 Protein of unknown function (DUF4003) 16 310 1.7E-90 T 14-10-2018 IPR025062 Protein of unknown function DUF4003 GYO_4306 3d51e994fec518fc1deb7aaf791b0108 286 Gene3D G3DSA:3.40.50.150 13 286 1.2E-56 T 14-10-2018 GYO_4306 3d51e994fec518fc1deb7aaf791b0108 286 SUPERFAMILY SSF53335 13 270 1.08E-25 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase GYO_4306 3d51e994fec518fc1deb7aaf791b0108 286 Pfam PF08241 Methyltransferase domain 101 189 2.8E-9 T 14-10-2018 IPR013216 Methyltransferase type 11 GO:0008168 GYO_4306 3d51e994fec518fc1deb7aaf791b0108 286 PIRSF PIRSF018249 2 286 4.0E-89 T 14-10-2018 IPR016718 rRNA (guanine-N1-)-methyltransferase A, predicted GO:0008168 GYO_3862 cdd9186fcd736b399ddd098abb5e4a5c 398 Pfam PF13180 PDZ domain 299 350 3.0E-6 T 14-10-2018 IPR001478 PDZ domain GO:0005515 GYO_3862 cdd9186fcd736b399ddd098abb5e4a5c 398 SUPERFAMILY SSF50156 303 384 7.1E-14 T 14-10-2018 IPR036034 PDZ superfamily GO:0005515 GYO_3862 cdd9186fcd736b399ddd098abb5e4a5c 398 Gene3D G3DSA:2.30.42.10 279 374 1.2E-11 T 14-10-2018 GYO_3862 cdd9186fcd736b399ddd098abb5e4a5c 398 SMART SM00228 295 361 7.3E-7 T 14-10-2018 IPR001478 PDZ domain GO:0005515 GYO_1652 fcfedd700ceb23432de77022956f990d 45 Pfam PF11132 Transcriptional regulator protein (SplA) 9 40 2.3E-10 T 14-10-2018 IPR022608 Transcription regulator SplA GYO_1652 fcfedd700ceb23432de77022956f990d 45 ProDom PD028055 SPLA TRANSCRIPTIONAL TRANSCRIPTION REGULATOR REGULATION 8 44 5.0E-4 T 14-10-2018 GYO_1438 cd1e9dd55670d56520a20b9ca7d96016 413 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 4 246 1.9E-61 T 14-10-2018 IPR014030 Beta-ketoacyl synthase, N-terminal GYO_1438 cd1e9dd55670d56520a20b9ca7d96016 413 Gene3D G3DSA:3.40.47.10 1 255 4.7E-112 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 GYO_1438 cd1e9dd55670d56520a20b9ca7d96016 413 TIGRFAM TIGR03150 fabF: beta-ketoacyl-acyl-carrier-protein synthase II 4 409 1.5E-204 T 14-10-2018 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 GO:0006633|GO:0016747 GYO_1438 cd1e9dd55670d56520a20b9ca7d96016 413 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 155 171 - T 14-10-2018 IPR018201 Beta-ketoacyl synthase, active site GYO_1438 cd1e9dd55670d56520a20b9ca7d96016 413 SUPERFAMILY SSF53901 4 251 9.1E-77 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 GYO_1438 cd1e9dd55670d56520a20b9ca7d96016 413 Gene3D G3DSA:3.40.47.10 256 400 1.4E-59 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 GYO_1438 cd1e9dd55670d56520a20b9ca7d96016 413 SUPERFAMILY SSF53901 214 411 5.0E-77 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 GYO_1438 cd1e9dd55670d56520a20b9ca7d96016 413 PIRSF PIRSF000447 1 413 1.4E-192 T 14-10-2018 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 GO:0006633|GO:0016747 GYO_1438 cd1e9dd55670d56520a20b9ca7d96016 413 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 254 368 6.0E-41 T 14-10-2018 IPR014031 Beta-ketoacyl synthase, C-terminal GYO_1438 cd1e9dd55670d56520a20b9ca7d96016 413 SMART SM00825 Beta-ketoacyl synthase 6 413 4.0E-16 T 14-10-2018 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain GYO_3737 d2f98c049931a298dc49539feb18ebff 109 SUPERFAMILY SSF46785 6 100 6.68E-18 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily GYO_3737 d2f98c049931a298dc49539feb18ebff 109 Gene3D G3DSA:1.10.10.10 5 109 2.2E-19 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily GYO_3737 d2f98c049931a298dc49539feb18ebff 109 Pfam PF03551 Transcriptional regulator PadR-like family 18 85 1.1E-13 T 14-10-2018 IPR005149 Transcription regulator PadR, N-terminal GYO_1051 b38ecc07b963ca2d86bd46f9529e7d51 172 TIGRFAM TIGR01382 PfpI: intracellular protease, PfpI family 4 171 2.7E-59 T 14-10-2018 IPR006286 Deglycase PfpI GYO_1051 b38ecc07b963ca2d86bd46f9529e7d51 172 Gene3D G3DSA:3.40.50.880 1 171 9.9E-55 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like GYO_1051 b38ecc07b963ca2d86bd46f9529e7d51 172 SUPERFAMILY SSF52317 1 170 5.33E-48 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like GYO_1051 b38ecc07b963ca2d86bd46f9529e7d51 172 Pfam PF01965 DJ-1/PfpI family 3 167 3.5E-56 T 14-10-2018 IPR002818 DJ-1/PfpI Reactome: R-HSA-3899300 GYO_2335 afc604c7f347b31538c17741a19fa414 281 PRINTS PR01703 Manganese superoxide dismutase signature 196 204 1.4E-20 T 14-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 GYO_2335 afc604c7f347b31538c17741a19fa414 281 PRINTS PR01703 Manganese superoxide dismutase signature 234 246 1.4E-20 T 14-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 GYO_2335 afc604c7f347b31538c17741a19fa414 281 PRINTS PR01703 Manganese superoxide dismutase signature 83 94 1.4E-20 T 14-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 GYO_2335 afc604c7f347b31538c17741a19fa414 281 PRINTS PR01703 Manganese superoxide dismutase signature 104 117 1.4E-20 T 14-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 GYO_2335 afc604c7f347b31538c17741a19fa414 281 PRINTS PR01703 Manganese superoxide dismutase signature 143 156 1.4E-20 T 14-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 GYO_2335 afc604c7f347b31538c17741a19fa414 281 Pfam PF02777 Iron/manganese superoxide dismutases, C-terminal domain 167 269 4.2E-34 T 14-10-2018 IPR019832 Manganese/iron superoxide dismutase, C-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 GYO_2335 afc604c7f347b31538c17741a19fa414 281 Gene3D G3DSA:1.10.287.990 97 160 2.8E-23 T 14-10-2018 IPR036324 Manganese/iron superoxide dismutase, N-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 GYO_2335 afc604c7f347b31538c17741a19fa414 281 ProSitePatterns PS00088 Manganese and iron superoxide dismutases signature. 236 243 - T 14-10-2018 IPR019833 Manganese/iron superoxide dismutase, binding site GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 GYO_2335 afc604c7f347b31538c17741a19fa414 281 Gene3D G3DSA:2.40.500.20 161 280 7.6E-43 T 14-10-2018 IPR036314 Manganese/iron superoxide dismutase, C-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 GYO_2335 afc604c7f347b31538c17741a19fa414 281 SUPERFAMILY SSF46609 77 164 3.27E-30 T 14-10-2018 IPR036324 Manganese/iron superoxide dismutase, N-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 GYO_2335 afc604c7f347b31538c17741a19fa414 281 SUPERFAMILY SSF54719 159 274 1.11E-41 T 14-10-2018 IPR036314 Manganese/iron superoxide dismutase, C-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 GYO_2335 afc604c7f347b31538c17741a19fa414 281 Pfam PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain 79 159 2.7E-26 T 14-10-2018 IPR019831 Manganese/iron superoxide dismutase, N-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 GYO_1733 8f230a31b520d65a7d72d80f02801598 606 SMART SM00388 395 458 5.3E-14 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 GYO_1733 8f230a31b520d65a7d72d80f02801598 606 Pfam PF08447 PAS fold 27 96 5.8E-7 T 14-10-2018 IPR013655 PAS fold-3 GO:0005515 GYO_1733 8f230a31b520d65a7d72d80f02801598 606 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 264 385 1.2E-12 T 14-10-2018 IPR000014 PAS domain GYO_1733 8f230a31b520d65a7d72d80f02801598 606 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 145 259 3.1E-13 T 14-10-2018 IPR000014 PAS domain GYO_1733 8f230a31b520d65a7d72d80f02801598 606 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 5 98 9.3E-6 T 14-10-2018 IPR000014 PAS domain GYO_1733 8f230a31b520d65a7d72d80f02801598 606 Gene3D G3DSA:3.30.450.20 143 255 4.5E-13 T 14-10-2018 GYO_1733 8f230a31b520d65a7d72d80f02801598 606 SUPERFAMILY SSF55785 158 263 4.99E-13 T 14-10-2018 IPR035965 PAS domain superfamily GYO_1733 8f230a31b520d65a7d72d80f02801598 606 SUPERFAMILY SSF55785 19 96 4.06E-10 T 14-10-2018 IPR035965 PAS domain superfamily GYO_1733 8f230a31b520d65a7d72d80f02801598 606 Gene3D G3DSA:3.30.450.20 256 377 1.4E-13 T 14-10-2018 GYO_1733 8f230a31b520d65a7d72d80f02801598 606 Gene3D G3DSA:1.10.287.130 380 458 2.4E-17 T 14-10-2018 GYO_1733 8f230a31b520d65a7d72d80f02801598 606 SUPERFAMILY SSF55874 449 605 2.49E-39 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily GYO_1733 8f230a31b520d65a7d72d80f02801598 606 SMART SM00387 501 606 1.2E-31 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase GYO_1733 8f230a31b520d65a7d72d80f02801598 606 SMART SM00086 74 116 0.52 T 14-10-2018 IPR001610 PAC motif GYO_1733 8f230a31b520d65a7d72d80f02801598 606 SMART SM00086 215 255 0.38 T 14-10-2018 IPR001610 PAC motif GYO_1733 8f230a31b520d65a7d72d80f02801598 606 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 501 605 3.6E-22 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase GYO_1733 8f230a31b520d65a7d72d80f02801598 606 SUPERFAMILY SSF55785 252 378 3.89E-14 T 14-10-2018 IPR035965 PAS domain superfamily GYO_1733 8f230a31b520d65a7d72d80f02801598 606 SUPERFAMILY SSF47384 392 457 6.67E-12 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 GYO_1733 8f230a31b520d65a7d72d80f02801598 606 Pfam PF00989 PAS fold 144 248 7.2E-17 T 14-10-2018 IPR013767 PAS fold GO:0006355 GYO_1733 8f230a31b520d65a7d72d80f02801598 606 Pfam PF00989 PAS fold 267 377 6.9E-18 T 14-10-2018 IPR013767 PAS fold GO:0006355 GYO_1733 8f230a31b520d65a7d72d80f02801598 606 Gene3D G3DSA:3.30.450.20 11 117 9.0E-22 T 14-10-2018 GYO_1733 8f230a31b520d65a7d72d80f02801598 606 Gene3D G3DSA:3.30.565.10 459 606 6.6E-43 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily GYO_1733 8f230a31b520d65a7d72d80f02801598 606 SMART SM00091 267 333 4.0E-10 T 14-10-2018 IPR000014 PAS domain GYO_1733 8f230a31b520d65a7d72d80f02801598 606 SMART SM00091 143 209 3.4E-9 T 14-10-2018 IPR000014 PAS domain GYO_1733 8f230a31b520d65a7d72d80f02801598 606 SMART SM00091 5 71 4.4E-5 T 14-10-2018 IPR000014 PAS domain GYO_1733 8f230a31b520d65a7d72d80f02801598 606 PRINTS PR00344 Bacterial sensor protein C-terminal signature 591 604 2.3E-14 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 GYO_1733 8f230a31b520d65a7d72d80f02801598 606 PRINTS PR00344 Bacterial sensor protein C-terminal signature 538 552 2.3E-14 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 GYO_1733 8f230a31b520d65a7d72d80f02801598 606 PRINTS PR00344 Bacterial sensor protein C-terminal signature 556 566 2.3E-14 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 GYO_1733 8f230a31b520d65a7d72d80f02801598 606 PRINTS PR00344 Bacterial sensor protein C-terminal signature 567 585 2.3E-14 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 GYO_1733 8f230a31b520d65a7d72d80f02801598 606 Pfam PF00512 His Kinase A (phospho-acceptor) domain 397 456 1.0E-14 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 GYO_1789 3c3717a37653911a8aeead702cbc4ff3 555 Pfam PF00753 Metallo-beta-lactamase superfamily 19 167 2.0E-15 T 14-10-2018 IPR001279 Metallo-beta-lactamase GYO_1789 3c3717a37653911a8aeead702cbc4ff3 555 PIRSF PIRSF004803 1 555 1.4E-248 T 14-10-2018 IPR030854 Ribonuclease J, bacteria GO:0004521|GO:0004534|GO:0006396|GO:0008270|GO:0090501 GYO_1789 3c3717a37653911a8aeead702cbc4ff3 555 Hamap MF_01491 Ribonuclease J [rnj]. 4 555 47.873 T 14-10-2018 IPR030854 Ribonuclease J, bacteria GO:0004521|GO:0004534|GO:0006396|GO:0008270|GO:0090501 GYO_1789 3c3717a37653911a8aeead702cbc4ff3 555 SUPERFAMILY SSF56281 11 423 2.17E-95 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like GYO_1789 3c3717a37653911a8aeead702cbc4ff3 555 Gene3D G3DSA:3.10.20.580 449 555 2.6E-39 T 14-10-2018 GYO_1789 3c3717a37653911a8aeead702cbc4ff3 555 SMART SM00849 21 215 1.2E-23 T 14-10-2018 IPR001279 Metallo-beta-lactamase GYO_1789 3c3717a37653911a8aeead702cbc4ff3 555 Pfam PF07521 Zn-dependent metallo-hydrolase RNA specificity domain 361 408 6.6E-8 T 14-10-2018 IPR011108 Zn-dependent metallo-hydrolase, RNA specificity domain GYO_1789 3c3717a37653911a8aeead702cbc4ff3 555 ProSitePatterns PS01292 Uncharacterized protein family UPF0036 signature. 364 392 - T 14-10-2018 IPR001587 Ribonuclease J, conserved site GYO_1789 3c3717a37653911a8aeead702cbc4ff3 555 Gene3D G3DSA:3.60.15.10 12 442 1.0E-195 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like GYO_1789 3c3717a37653911a8aeead702cbc4ff3 555 TIGRFAM TIGR00649 MG423: beta-CASP ribonuclease, RNase J family 10 553 1.3E-239 T 14-10-2018 IPR004613 Ribonuclease J GO:0003723|GO:0046872 GYO_1789 3c3717a37653911a8aeead702cbc4ff3 555 Gene3D G3DSA:3.40.50.10710 207 357 1.0E-195 T 14-10-2018 GYO_1571 df660c43c04361d8a12bd87812c55b81 496 Pfam PF04860 Phage portal protein 128 450 9.3E-11 T 14-10-2018 IPR006944 Bacteriophage/Gene transfer agent portal protein GYO_1571 df660c43c04361d8a12bd87812c55b81 496 TIGRFAM TIGR01540 portal_PBSX: phage portal protein, PBSX family 37 410 4.1E-152 T 14-10-2018 IPR006430 Phage portal protein PBSX family GYO_1571 df660c43c04361d8a12bd87812c55b81 496 PIRSF PIRSF019260 7 496 8.4E-184 T 14-10-2018 IPR016753 Phage portal protein PBSX family, Firmicutes GYO_2103 e9c297e30428c396a29597bc476191be 455 Gene3D G3DSA:3.40.50.300 237 401 1.0E-31 T 14-10-2018 GYO_2103 e9c297e30428c396a29597bc476191be 455 PIRSF PIRSF006809 36 454 2.0E-144 T 14-10-2018 IPR016496 GTPase HflX GO:0005525 GYO_2103 e9c297e30428c396a29597bc476191be 455 TIGRFAM TIGR03156 GTP_HflX: GTP-binding protein HflX 45 393 3.0E-144 T 14-10-2018 IPR016496 GTPase HflX GO:0005525 GYO_2103 e9c297e30428c396a29597bc476191be 455 Pfam PF01926 50S ribosome-binding GTPase 237 356 3.4E-18 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 GYO_2103 e9c297e30428c396a29597bc476191be 455 Pfam PF13167 GTP-binding GTPase N-terminal 62 150 1.9E-33 T 14-10-2018 IPR025121 GTPase HflX, N-terminal GYO_2103 e9c297e30428c396a29597bc476191be 455 Gene3D G3DSA:3.40.50.11060 55 176 8.6E-42 T 14-10-2018 GYO_2103 e9c297e30428c396a29597bc476191be 455 SUPERFAMILY SSF52540 235 397 1.13E-35 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase GYO_2103 e9c297e30428c396a29597bc476191be 455 Hamap MF_00900 GTPase HflX [hflX]. 65 424 48.364 T 14-10-2018 IPR016496 GTPase HflX GO:0005525 GYO_2103 e9c297e30428c396a29597bc476191be 455 Pfam PF16360 GTP-binding GTPase Middle Region 152 230 1.5E-30 T 14-10-2018 IPR032305 GTP-binding protein, middle domain GYO_2103 e9c297e30428c396a29597bc476191be 455 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 305 323 2.2E-8 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 GYO_2103 e9c297e30428c396a29597bc476191be 455 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 238 258 2.2E-8 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 GYO_3416 cc6dd837f94b53641a0937ff00dd58ec 430 Gene3D G3DSA:3.10.580.10 195 345 6.2E-53 T 14-10-2018 GYO_3416 cc6dd837f94b53641a0937ff00dd58ec 430 Pfam PF03471 Transporter associated domain 353 427 5.5E-16 T 14-10-2018 IPR005170 Transporter-associated domain GYO_3416 cc6dd837f94b53641a0937ff00dd58ec 430 SMART SM01091 351 428 3.4E-20 T 14-10-2018 IPR005170 Transporter-associated domain GYO_3416 cc6dd837f94b53641a0937ff00dd58ec 430 Pfam PF01595 Domain of unknown function DUF21 7 201 2.0E-48 T 14-10-2018 IPR002550 CNNM, transmembrane domain GYO_3416 cc6dd837f94b53641a0937ff00dd58ec 430 SUPERFAMILY SSF56176 349 426 7.36E-16 T 14-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 GYO_3416 cc6dd837f94b53641a0937ff00dd58ec 430 SUPERFAMILY SSF54631 204 338 3.16E-33 T 14-10-2018 GYO_3416 cc6dd837f94b53641a0937ff00dd58ec 430 Pfam PF00571 CBS domain 282 335 4.9E-6 T 14-10-2018 IPR000644 CBS domain GYO_3416 cc6dd837f94b53641a0937ff00dd58ec 430 Pfam PF00571 CBS domain 218 272 5.0E-8 T 14-10-2018 IPR000644 CBS domain GYO_3416 cc6dd837f94b53641a0937ff00dd58ec 430 Gene3D G3DSA:3.30.465.10 346 429 7.1E-16 T 14-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 GYO_2460 d200eec573fc249d0785b5f748eded50 219 TIGRFAM TIGR01083 nth: endonuclease III 5 196 1.8E-88 T 14-10-2018 IPR005759 Endonuclease III GO:0003906|GO:0006284 GYO_2460 d200eec573fc249d0785b5f748eded50 219 Pfam PF10576 Iron-sulfur binding domain of endonuclease III 189 205 6.0E-4 T 14-10-2018 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif GO:0051539 Reactome: R-HSA-110357 GYO_2460 d200eec573fc249d0785b5f748eded50 219 Hamap MF_00942 Endonuclease III [nth]. 1 211 39.269 T 14-10-2018 IPR005759 Endonuclease III GO:0003906|GO:0006284 GYO_2460 d200eec573fc249d0785b5f748eded50 219 SMART SM00478 39 187 3.0E-71 T 14-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 GYO_2460 d200eec573fc249d0785b5f748eded50 219 SMART SM00525 188 208 4.9E-4 T 14-10-2018 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif GO:0051539 Reactome: R-HSA-110357 GYO_2460 d200eec573fc249d0785b5f748eded50 219 Pfam PF00633 Helix-hairpin-helix motif 101 128 5.3E-10 T 14-10-2018 IPR000445 Helix-hairpin-helix motif GO:0003677 Reactome: R-HSA-110357 GYO_2460 d200eec573fc249d0785b5f748eded50 219 Gene3D G3DSA:1.10.340.30 22 133 3.6E-81 T 14-10-2018 GYO_2460 d200eec573fc249d0785b5f748eded50 219 PIRSF PIRSF001435 3 214 5.9E-57 T 14-10-2018 GYO_2460 d200eec573fc249d0785b5f748eded50 219 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 35 170 9.5E-24 T 14-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 GYO_2460 d200eec573fc249d0785b5f748eded50 219 SUPERFAMILY SSF48150 3 210 6.6E-73 T 14-10-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 GYO_2460 d200eec573fc249d0785b5f748eded50 219 Gene3D G3DSA:1.10.1670.10 17 205 3.6E-81 T 14-10-2018 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal Reactome: R-HSA-110357 GYO_2460 d200eec573fc249d0785b5f748eded50 219 ProSitePatterns PS00764 Endonuclease III iron-sulfur binding region signature. 189 205 - T 14-10-2018 IPR004035 Endonuclease III, iron-sulphur binding site Reactome: R-HSA-110330|Reactome: R-HSA-110331|Reactome: R-HSA-110357 GYO_2460 d200eec573fc249d0785b5f748eded50 219 ProSitePatterns PS01155 Endonuclease III family signature. 103 132 - T 14-10-2018 IPR004036 Endonuclease III-like, conserved site-2 Reactome: R-HSA-110357 GYO_0142 e3951e97f9f82491c34b4f58bf503c25 102 SUPERFAMILY SSF54999 5 102 6.41E-39 T 14-10-2018 IPR036838 Ribosomal protein S10 domain superfamily GYO_0142 e3951e97f9f82491c34b4f58bf503c25 102 Pfam PF00338 Ribosomal protein S10p/S20e 7 101 7.9E-37 T 14-10-2018 IPR027486 Ribosomal protein S10 domain GYO_0142 e3951e97f9f82491c34b4f58bf503c25 102 PRINTS PR00971 Ribosomal protein S10 family signature 5 18 6.3E-20 T 14-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 GYO_0142 e3951e97f9f82491c34b4f58bf503c25 102 PRINTS PR00971 Ribosomal protein S10 family signature 61 75 6.3E-20 T 14-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 GYO_0142 e3951e97f9f82491c34b4f58bf503c25 102 PRINTS PR00971 Ribosomal protein S10 family signature 40 55 6.3E-20 T 14-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 GYO_0142 e3951e97f9f82491c34b4f58bf503c25 102 SMART SM01403 7 101 5.7E-61 T 14-10-2018 IPR027486 Ribosomal protein S10 domain GYO_0142 e3951e97f9f82491c34b4f58bf503c25 102 TIGRFAM TIGR01049 rpsJ_bact: ribosomal protein uS10 4 101 3.4E-47 T 14-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 GYO_0142 e3951e97f9f82491c34b4f58bf503c25 102 ProSitePatterns PS00361 Ribosomal protein S10 signature. 29 44 - T 14-10-2018 IPR018268 Ribosomal protein S10, conserved site GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 GYO_0142 e3951e97f9f82491c34b4f58bf503c25 102 Hamap MF_00508 30S ribosomal protein S10 [rpsJ]. 3 102 28.352 T 14-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 GYO_0142 e3951e97f9f82491c34b4f58bf503c25 102 Gene3D G3DSA:3.30.70.600 1 102 1.1E-38 T 14-10-2018 IPR036838 Ribosomal protein S10 domain superfamily GYO_2549 0185dc33fa482a87d2869bb632642a59 244 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 66 226 3.9E-52 T 14-10-2018 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 GYO_2549 0185dc33fa482a87d2869bb632642a59 244 Pfam PF00849 RNA pseudouridylate synthase 62 196 3.0E-25 T 14-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 GYO_2549 0185dc33fa482a87d2869bb632642a59 244 SUPERFAMILY SSF55120 46 238 2.26E-46 T 14-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 GYO_2549 0185dc33fa482a87d2869bb632642a59 244 Gene3D G3DSA:3.30.70.580 64 223 1.2E-57 T 14-10-2018 GYO_2549 0185dc33fa482a87d2869bb632642a59 244 Pfam PF01479 S4 domain 2 48 3.1E-16 T 14-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 GYO_2549 0185dc33fa482a87d2869bb632642a59 244 Gene3D G3DSA:3.30.70.1560 123 215 1.2E-57 T 14-10-2018 GYO_2549 0185dc33fa482a87d2869bb632642a59 244 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 99 113 - T 14-10-2018 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 GYO_2549 0185dc33fa482a87d2869bb632642a59 244 SMART SM00363 2 63 2.7E-16 T 14-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 GYO_2549 0185dc33fa482a87d2869bb632642a59 244 Gene3D G3DSA:3.10.290.10 1 63 6.1E-22 T 14-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 GYO_2549 0185dc33fa482a87d2869bb632642a59 244 SUPERFAMILY SSF55174 2 67 1.3E-16 T 14-10-2018 GYO_0170 6ae2212fbcba628d70bce8673e221e64 281 SMART SM00382 34 219 2.1E-17 T 14-10-2018 IPR003593 AAA+ ATPase domain GYO_0170 6ae2212fbcba628d70bce8673e221e64 281 SUPERFAMILY SSF52540 6 231 4.03E-66 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase GYO_0170 6ae2212fbcba628d70bce8673e221e64 281 TIGRFAM TIGR04520 ECF_ATPase_1: energy-coupling factor transporter ATPase 7 275 2.1E-120 T 14-10-2018 IPR030947 Energy-coupling factor transporter ATP-binding protein EcfA1 GYO_0170 6ae2212fbcba628d70bce8673e221e64 281 ProSitePatterns PS00211 ABC transporters family signature. 143 157 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 GYO_0170 6ae2212fbcba628d70bce8673e221e64 281 Pfam PF00005 ABC transporter 25 171 6.4E-36 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 GYO_0170 6ae2212fbcba628d70bce8673e221e64 281 Gene3D G3DSA:3.40.50.300 3 280 9.7E-82 T 14-10-2018 GYO_0057 d1d06ff3061c02f0d141ddf1aa616d50 125 ProSitePatterns PS01094 Uncharacterized protein family UPF0076 signature. 100 118 - T 14-10-2018 IPR019897 RidA, conserved site Reactome: R-HSA-8849175 GYO_0057 d1d06ff3061c02f0d141ddf1aa616d50 125 Pfam PF01042 Endoribonuclease L-PSP 7 123 4.2E-49 T 14-10-2018 IPR006175 YjgF/YER057c/UK114 family Reactome: R-HSA-8849175 GYO_0057 d1d06ff3061c02f0d141ddf1aa616d50 125 Gene3D G3DSA:3.30.1330.40 2 125 2.9E-58 T 14-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 GYO_0057 d1d06ff3061c02f0d141ddf1aa616d50 125 TIGRFAM TIGR00004 TIGR00004: reactive intermediate/imine deaminase 3 123 1.5E-57 T 14-10-2018 IPR006056 RidA family Reactome: R-HSA-8849175 GYO_0057 d1d06ff3061c02f0d141ddf1aa616d50 125 SUPERFAMILY SSF55298 2 124 1.46E-48 T 14-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 GYO_1732 db2787dd3c527525ed45562c79993225 704 SUPERFAMILY SSF56519 59 341 2.35E-34 T 14-10-2018 IPR036138 Penicillin-binding protein, dimerisation domain superfamily GO:0008658 GYO_1732 db2787dd3c527525ed45562c79993225 704 Pfam PF03717 Penicillin-binding Protein dimerisation domain 64 326 8.0E-28 T 14-10-2018 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 GYO_1732 db2787dd3c527525ed45562c79993225 704 SUPERFAMILY SSF56601 343 697 1.11E-63 T 14-10-2018 IPR012338 Beta-lactamase/transpeptidase-like GYO_1732 db2787dd3c527525ed45562c79993225 704 Gene3D G3DSA:3.90.1310.30 66 591 8.5E-198 T 14-10-2018 GYO_1732 db2787dd3c527525ed45562c79993225 704 Pfam PF00905 Penicillin binding protein transpeptidase domain 373 691 1.4E-78 T 14-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 GYO_1732 db2787dd3c527525ed45562c79993225 704 Gene3D G3DSA:3.40.710.10 341 686 8.5E-198 T 14-10-2018 GYO_1732 db2787dd3c527525ed45562c79993225 704 Gene3D G3DSA:1.10.10.1230 91 217 8.5E-198 T 14-10-2018 GYO_3847 1676714ae5d7da3c9f6adfc913cb1d4b 403 Gene3D G3DSA:1.20.1720.10 11 400 4.1E-67 T 14-10-2018 GYO_3847 1676714ae5d7da3c9f6adfc913cb1d4b 403 PRINTS PR01036 Tetracycline resistance protein TetB signature 14 38 3.9E-7 T 14-10-2018 GYO_3847 1676714ae5d7da3c9f6adfc913cb1d4b 403 PRINTS PR01036 Tetracycline resistance protein TetB signature 135 159 3.9E-7 T 14-10-2018 GYO_3847 1676714ae5d7da3c9f6adfc913cb1d4b 403 PRINTS PR01036 Tetracycline resistance protein TetB signature 105 125 3.9E-7 T 14-10-2018 GYO_3847 1676714ae5d7da3c9f6adfc913cb1d4b 403 SUPERFAMILY SSF103473 5 395 1.83E-67 T 14-10-2018 IPR036259 MFS transporter superfamily GYO_3847 1676714ae5d7da3c9f6adfc913cb1d4b 403 Pfam PF07690 Major Facilitator Superfamily 15 355 5.0E-50 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 GYO_4089 bb27ee6eee8cb13a26b5cb1e697adfe4 212 Pfam PF00923 Transaldolase/Fructose-6-phosphate aldolase 3 203 6.9E-55 T 14-10-2018 IPR001585 Transaldolase/Fructose-6-phosphate aldolase GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336|Reactome: R-HSA-8950505 GYO_4089 bb27ee6eee8cb13a26b5cb1e697adfe4 212 ProSitePatterns PS00958 Transaldolase active site. 81 98 - T 14-10-2018 IPR018225 Transaldolase, active site GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336|Reactome: R-HSA-8950505 GYO_4089 bb27ee6eee8cb13a26b5cb1e697adfe4 212 TIGRFAM TIGR00875 fsa_talC_mipB: fructose-6-phosphate aldolase 1 212 5.0E-108 T 14-10-2018 IPR004731 Transaldolase type 3B/Fructose-6-phosphate aldolase GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723 GYO_4089 bb27ee6eee8cb13a26b5cb1e697adfe4 212 Hamap MF_00494 Probable transaldolase [tal]. 1 211 46.062 T 14-10-2018 IPR022999 Transaldolase type 3B, putative GO:0004801 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723 GYO_4089 bb27ee6eee8cb13a26b5cb1e697adfe4 212 Gene3D G3DSA:3.20.20.70 1 212 1.9E-92 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 GYO_4089 bb27ee6eee8cb13a26b5cb1e697adfe4 212 SUPERFAMILY SSF51569 1 212 8.58E-75 T 14-10-2018 GYO_4089 bb27ee6eee8cb13a26b5cb1e697adfe4 212 ProSitePatterns PS01054 Transaldolase signature 1. 24 32 - T 14-10-2018 IPR018225 Transaldolase, active site GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336|Reactome: R-HSA-8950505 GYO_2443 8cf89d5b51b5c56295c2e3b0636d3379 385 Gene3D G3DSA:3.30.2130.30 8 247 6.7E-124 T 14-10-2018 GYO_2443 8cf89d5b51b5c56295c2e3b0636d3379 385 Pfam PF01170 Putative RNA methylase family UPF0020 164 368 4.2E-70 T 14-10-2018 IPR000241 Putative RNA methylase domain GYO_2443 8cf89d5b51b5c56295c2e3b0636d3379 385 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 301 307 - T 14-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 GYO_2443 8cf89d5b51b5c56295c2e3b0636d3379 385 Gene3D G3DSA:3.40.50.150 162 367 6.7E-124 T 14-10-2018 GYO_2443 8cf89d5b51b5c56295c2e3b0636d3379 385 SUPERFAMILY SSF53335 145 362 5.72E-40 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase GYO_2443 8cf89d5b51b5c56295c2e3b0636d3379 385 SMART SM00981 57 156 7.0E-9 T 14-10-2018 IPR004114 THUMP domain GO:0003723 GYO_2443 8cf89d5b51b5c56295c2e3b0636d3379 385 ProSitePatterns PS01261 Uncharacterized protein family UPF0020 signature. 197 208 - T 14-10-2018 IPR000241 Putative RNA methylase domain GYO_2443 8cf89d5b51b5c56295c2e3b0636d3379 385 Pfam PF02926 THUMP domain 18 155 1.9E-19 T 14-10-2018 IPR004114 THUMP domain GO:0003723 GYO_2620 a4027cb2274947b9e9d8d8be153373c4 448 Gene3D G3DSA:3.40.50.1100 25 434 1.7E-187 T 14-10-2018 GYO_2620 a4027cb2274947b9e9d8d8be153373c4 448 Gene3D G3DSA:3.40.50.1100 115 237 1.7E-187 T 14-10-2018 GYO_2620 a4027cb2274947b9e9d8d8be153373c4 448 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 92 395 4.5E-51 T 14-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme GYO_2620 a4027cb2274947b9e9d8d8be153373c4 448 Hamap MF_01030 D-serine dehydratase [dsdA]. 1 448 235.279 T 14-10-2018 IPR011780 D-serine ammonia-lyase GO:0008721|GO:0030170|GO:0046416 KEGG: 00260+4.3.1.18 GYO_2620 a4027cb2274947b9e9d8d8be153373c4 448 TIGRFAM TIGR02035 D_Ser_am_lyase: D-serine ammonia-lyase 11 435 4.7E-236 T 14-10-2018 IPR011780 D-serine ammonia-lyase GO:0008721|GO:0030170|GO:0046416 KEGG: 00260+4.3.1.18 GYO_2620 a4027cb2274947b9e9d8d8be153373c4 448 SUPERFAMILY SSF53686 36 436 9.33E-55 T 14-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme GYO_2620 a4027cb2274947b9e9d8d8be153373c4 448 ProSitePatterns PS00165 Serine/threonine dehydratases pyridoxal-phosphate attachment site. 107 121 - T 14-10-2018 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site GO:0006520|GO:0030170 GYO_0231 abe88e8ffedfee3604beb149a5dd8af6 120 ProDom PD031312 YQBH LIN1274 PHAGE XKDH PHAGE-LIKE PBSX RELATED ELEMENT 1 116 4.0E-55 T 14-10-2018 IPR024556 Protein of unknown function DUF3599 GYO_0231 abe88e8ffedfee3604beb149a5dd8af6 120 Pfam PF12206 Domain of unknown function (DUF3599) 1 116 2.2E-57 T 14-10-2018 IPR024556 Protein of unknown function DUF3599 GYO_0231 abe88e8ffedfee3604beb149a5dd8af6 120 Gene3D G3DSA:2.40.10.370 1 120 8.3E-50 T 14-10-2018 IPR038667 XkdH-like superfamily GYO_0310 abe88e8ffedfee3604beb149a5dd8af6 120 ProDom PD031312 YQBH LIN1274 PHAGE XKDH PHAGE-LIKE PBSX RELATED ELEMENT 1 116 4.0E-55 T 14-10-2018 IPR024556 Protein of unknown function DUF3599 GYO_0310 abe88e8ffedfee3604beb149a5dd8af6 120 Pfam PF12206 Domain of unknown function (DUF3599) 1 116 2.2E-57 T 14-10-2018 IPR024556 Protein of unknown function DUF3599 GYO_0310 abe88e8ffedfee3604beb149a5dd8af6 120 Gene3D G3DSA:2.40.10.370 1 120 8.3E-50 T 14-10-2018 IPR038667 XkdH-like superfamily GYO_0565 cb701b2a0068a4daa03f37697d790d0f 242 Pfam PF00975 Thioesterase domain 15 233 1.9E-57 T 14-10-2018 IPR001031 Thioesterase GO:0009058|GO:0016788 Reactome: R-HSA-75105 GYO_0565 cb701b2a0068a4daa03f37697d790d0f 242 Gene3D G3DSA:3.40.50.1820 1 242 5.1E-71 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold GYO_0565 cb701b2a0068a4daa03f37697d790d0f 242 SUPERFAMILY SSF53474 11 234 3.16E-48 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold GYO_1169 35a736e0a46342fdb3c0d188cc26d163 298 Gene3D G3DSA:3.40.50.300 46 292 2.4E-57 T 14-10-2018 GYO_1169 35a736e0a46342fdb3c0d188cc26d163 298 ProSitePatterns PS00211 ABC transporters family signature. 174 188 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 GYO_1169 35a736e0a46342fdb3c0d188cc26d163 298 SMART SM00382 74 250 4.0E-15 T 14-10-2018 IPR003593 AAA+ ATPase domain GYO_1169 35a736e0a46342fdb3c0d188cc26d163 298 Pfam PF00005 ABC transporter 65 201 3.7E-32 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 GYO_1169 35a736e0a46342fdb3c0d188cc26d163 298 SUPERFAMILY SSF52540 59 277 4.39E-63 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase GYO_1857 e4e7300eb473735a09674c3e8adbc696 298 SUPERFAMILY SSF51735 1 145 1.2E-19 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily GYO_1857 e4e7300eb473735a09674c3e8adbc696 298 TIGRFAM TIGR00745 apbA_panE: 2-dehydropantoate 2-reductase 2 293 8.8E-82 T 14-10-2018 IPR003710 Ketopantoate reductase ApbA/PanE GO:0005737|GO:0008677|GO:0015940 KEGG: 00770+1.1.1.169|MetaCyc: PWY-6654 GYO_1857 e4e7300eb473735a09674c3e8adbc696 298 Pfam PF08546 Ketopantoate reductase PanE/ApbA C terminal 178 291 3.1E-28 T 14-10-2018 IPR013752 Ketopantoate reductase, C-terminal domain GYO_1857 e4e7300eb473735a09674c3e8adbc696 298 Pfam PF02558 Ketopantoate reductase PanE/ApbA 3 146 1.7E-31 T 14-10-2018 IPR013332 Ketopantoate reductase, N-terminal domain GYO_1857 e4e7300eb473735a09674c3e8adbc696 298 SUPERFAMILY SSF48179 171 291 2.41E-27 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 GYO_1857 e4e7300eb473735a09674c3e8adbc696 298 Gene3D G3DSA:3.40.50.720 1 170 8.4E-69 T 14-10-2018 GYO_1857 e4e7300eb473735a09674c3e8adbc696 298 Gene3D G3DSA:1.10.1040.10 171 298 2.1E-47 T 14-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 GYO_3196 8ea12677d4ff042c1129cba1cf33e45d 226 Pfam PF11167 Protein of unknown function (DUF2953) 127 180 3.1E-16 T 14-10-2018 IPR021338 Protein of unknown function DUF2953 GYO_2818 9cdca1853bc23553a729983e373819a5 379 SMART SM00729 1 222 4.5E-63 T 14-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 GYO_2818 9cdca1853bc23553a729983e373819a5 379 Gene3D G3DSA:3.80.30.20 2 300 5.3E-103 T 14-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe GYO_2818 9cdca1853bc23553a729983e373819a5 379 SUPERFAMILY SSF102114 3 376 3.66E-119 T 14-10-2018 GYO_2818 9cdca1853bc23553a729983e373819a5 379 TIGRFAM TIGR00539 hemN_rel: putative oxygen-independent coproporphyrinogen III oxidase 2 367 3.8E-180 T 14-10-2018 IPR004559 Oxygen-independent coproporphyrinogen III oxidase-like GO:0004109|GO:0005737|GO:0006779|GO:0055114 GYO_2818 9cdca1853bc23553a729983e373819a5 379 Pfam PF06969 HemN C-terminal domain 302 364 1.0E-16 T 14-10-2018 IPR010723 HemN, C-terminal GYO_2818 9cdca1853bc23553a729983e373819a5 379 Pfam PF04055 Radical SAM superfamily 6 176 3.1E-25 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 GYO_3923 bef77912a22842a054fcc1bba89e484f 292 SUPERFAMILY SSF53448 3 268 3.9E-68 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases GYO_3923 bef77912a22842a054fcc1bba89e484f 292 TIGRFAM TIGR01099 galU: UTP--glucose-1-phosphate uridylyltransferase 4 264 1.1E-124 T 14-10-2018 IPR005771 UTP--glucose-1-phosphate uridylyltransferase, bacterial/archaeal-type GO:0003983|GO:0006011 KEGG: 00040+2.7.7.9|KEGG: 00052+2.7.7.9|KEGG: 00500+2.7.7.9|KEGG: 00520+2.7.7.9|MetaCyc: PWY-3801|MetaCyc: PWY-6527|MetaCyc: PWY-7238|MetaCyc: PWY-7343|MetaCyc: PWY-7817 GYO_3923 bef77912a22842a054fcc1bba89e484f 292 Pfam PF00483 Nucleotidyl transferase 6 260 1.2E-33 T 14-10-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 GYO_3923 bef77912a22842a054fcc1bba89e484f 292 Gene3D G3DSA:3.90.550.10 1 291 1.3E-93 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases GYO_0465 de2f49d4c9a778d7f0fd68c00fe05ffd 241 Hamap MF_00902 Sec-independent protein translocase protein TatC [tatC]. 3 232 14.748 T 14-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 GYO_0465 de2f49d4c9a778d7f0fd68c00fe05ffd 241 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 147 175 1.4E-36 T 14-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 GYO_0465 de2f49d4c9a778d7f0fd68c00fe05ffd 241 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 96 122 1.4E-36 T 14-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 GYO_0465 de2f49d4c9a778d7f0fd68c00fe05ffd 241 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 7 34 1.4E-36 T 14-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 GYO_0465 de2f49d4c9a778d7f0fd68c00fe05ffd 241 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 78 96 1.4E-36 T 14-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 GYO_0465 de2f49d4c9a778d7f0fd68c00fe05ffd 241 Pfam PF00902 Sec-independent protein translocase protein (TatC) 11 214 8.9E-55 T 14-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 GYO_0465 de2f49d4c9a778d7f0fd68c00fe05ffd 241 TIGRFAM TIGR00945 tatC: twin arginine-targeting protein translocase TatC 8 219 1.3E-56 T 14-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 GYO_0465 de2f49d4c9a778d7f0fd68c00fe05ffd 241 ProSitePatterns PS01218 TatC family signature. 147 166 - T 14-10-2018 IPR019820 Sec-independent periplasmic protein translocase, conserved site GYO_2846 57d63354c2ec672e051d6ce5aa99cc22 242 Pfam PF04545 Sigma-70, region 4 174 224 1.5E-15 T 14-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 GYO_2846 57d63354c2ec672e051d6ce5aa99cc22 242 PIRSF PIRSF000770 1 242 2.9E-96 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 GYO_2846 57d63354c2ec672e051d6ce5aa99cc22 242 SUPERFAMILY SSF88946 10 121 1.18E-33 T 14-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 GYO_2846 57d63354c2ec672e051d6ce5aa99cc22 242 Pfam PF04542 Sigma-70 region 2 55 124 3.1E-17 T 14-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 GYO_2846 57d63354c2ec672e051d6ce5aa99cc22 242 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 50 224 5.1E-31 T 14-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 GYO_2846 57d63354c2ec672e051d6ce5aa99cc22 242 Gene3D G3DSA:1.20.120.1810 20 126 9.6E-24 T 14-10-2018 GYO_2846 57d63354c2ec672e051d6ce5aa99cc22 242 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 198 224 - T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 GYO_2846 57d63354c2ec672e051d6ce5aa99cc22 242 TIGRFAM TIGR02846 spore_sigmaK: RNA polymerase sigma-K factor 6 229 3.6E-115 T 14-10-2018 IPR014209 RNA polymerase sigma-K type GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 GYO_2846 57d63354c2ec672e051d6ce5aa99cc22 242 SUPERFAMILY SSF88659 140 226 1.4E-18 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like GYO_2846 57d63354c2ec672e051d6ce5aa99cc22 242 PRINTS PR00046 Major sigma-70 factor signature 177 189 7.3E-13 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 GYO_2846 57d63354c2ec672e051d6ce5aa99cc22 242 PRINTS PR00046 Major sigma-70 factor signature 213 224 7.3E-13 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 GYO_2846 57d63354c2ec672e051d6ce5aa99cc22 242 PRINTS PR00046 Major sigma-70 factor signature 79 92 7.3E-13 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 GYO_2846 57d63354c2ec672e051d6ce5aa99cc22 242 PRINTS PR00046 Major sigma-70 factor signature 198 213 7.3E-13 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 GYO_2846 57d63354c2ec672e051d6ce5aa99cc22 242 Gene3D G3DSA:1.10.10.10 155 235 3.5E-14 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily GYO_2846 57d63354c2ec672e051d6ce5aa99cc22 242 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 79 92 - T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 GYO_2830 b6d8af70d855be91994f739128ec4771 273 ProSitePatterns PS00521 Delta 1-pyrroline-5-carboxylate reductase signature. 220 242 - T 14-10-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 GYO_2830 b6d8af70d855be91994f739128ec4771 273 SUPERFAMILY SSF51735 2 153 5.18E-23 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily GYO_2830 b6d8af70d855be91994f739128ec4771 273 Gene3D G3DSA:3.40.50.720 1 160 7.6E-32 T 14-10-2018 GYO_2830 b6d8af70d855be91994f739128ec4771 273 Gene3D G3DSA:1.10.3730.10 161 262 1.3E-13 T 14-10-2018 GYO_2830 b6d8af70d855be91994f739128ec4771 273 Pfam PF03807 NADP oxidoreductase coenzyme F420-dependent 2 97 5.4E-20 T 14-10-2018 IPR028939 Pyrroline-5-carboxylate reductase, catalytic, N-terminal GYO_2830 b6d8af70d855be91994f739128ec4771 273 SUPERFAMILY SSF48179 160 262 3.06E-17 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 GYO_2830 b6d8af70d855be91994f739128ec4771 273 Pfam PF14748 Pyrroline-5-carboxylate reductase dimerisation 164 261 2.5E-16 T 14-10-2018 IPR029036 Pyrroline-5-carboxylate reductase, dimerisation domain KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 GYO_2830 b6d8af70d855be91994f739128ec4771 273 PIRSF PIRSF000193 1 266 1.9E-80 T 14-10-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 GYO_3688 156c17be4103c91cff87c85e1b9e5f75 220 SUPERFAMILY SSF52172 1 123 5.69E-34 T 14-10-2018 IPR011006 CheY-like superfamily GYO_3688 156c17be4103c91cff87c85e1b9e5f75 220 SMART SM00448 2 111 4.1E-35 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 GYO_3688 156c17be4103c91cff87c85e1b9e5f75 220 Pfam PF00486 Transcriptional regulatory protein, C terminal 146 218 4.5E-18 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 GYO_3688 156c17be4103c91cff87c85e1b9e5f75 220 SMART SM00862 145 219 1.8E-16 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 GYO_3688 156c17be4103c91cff87c85e1b9e5f75 220 Gene3D G3DSA:3.40.50.2300 1 127 1.7E-30 T 14-10-2018 GYO_3688 156c17be4103c91cff87c85e1b9e5f75 220 SUPERFAMILY SSF46894 122 219 9.92E-22 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 GYO_3688 156c17be4103c91cff87c85e1b9e5f75 220 Pfam PF00072 Response regulator receiver domain 4 112 4.0E-22 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 GYO_3688 156c17be4103c91cff87c85e1b9e5f75 220 Gene3D G3DSA:1.10.10.10 128 220 6.3E-23 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily GYO_1618 dd19baf6b7589977dc5f774ff9859b51 296 SUPERFAMILY SSF54001 168 293 3.29E-36 T 14-10-2018 IPR038765 Papain-like cysteine peptidase superfamily GYO_1618 dd19baf6b7589977dc5f774ff9859b51 296 Gene3D G3DSA:2.30.30.40 2 111 3.7E-36 T 14-10-2018 GYO_1618 dd19baf6b7589977dc5f774ff9859b51 296 Pfam PF00877 NlpC/P60 family 186 292 4.1E-27 T 14-10-2018 IPR000064 Endopeptidase, NLPC/P60 domain GYO_1618 dd19baf6b7589977dc5f774ff9859b51 296 Gene3D G3DSA:3.90.1720.10 154 286 9.2E-37 T 14-10-2018 GYO_1866 29cf0d5353a97b39c78aaa9d0303503f 451 SUPERFAMILY SSF51984 10 101 2.49E-15 T 14-10-2018 GYO_1866 29cf0d5353a97b39c78aaa9d0303503f 451 SUPERFAMILY SSF53623 104 309 3.27E-52 T 14-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 GYO_1866 29cf0d5353a97b39c78aaa9d0303503f 451 Hamap MF_00639 UDP-N-acetylmuramoylalanine--D-glutamate ligase [murD]. 10 450 36.089 T 14-10-2018 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase GO:0005524|GO:0005737|GO:0008360|GO:0008764|GO:0051301 KEGG: 00471+6.3.2.9|KEGG: 00550+6.3.2.9|MetaCyc: PWY-6386|MetaCyc: PWY-6387 GYO_1866 29cf0d5353a97b39c78aaa9d0303503f 451 SUPERFAMILY SSF53244 311 450 4.88E-42 T 14-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 GYO_1866 29cf0d5353a97b39c78aaa9d0303503f 451 Gene3D G3DSA:3.40.50.720 10 96 6.7E-26 T 14-10-2018 GYO_1866 29cf0d5353a97b39c78aaa9d0303503f 451 Pfam PF02875 Mur ligase family, glutamate ligase domain 312 378 3.7E-9 T 14-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 GYO_1866 29cf0d5353a97b39c78aaa9d0303503f 451 TIGRFAM TIGR01087 murD: UDP-N-acetylmuramoylalanine--D-glutamate ligase 11 448 3.1E-152 T 14-10-2018 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase GO:0005524|GO:0005737|GO:0008360|GO:0008764|GO:0051301 KEGG: 00471+6.3.2.9|KEGG: 00550+6.3.2.9|MetaCyc: PWY-6386|MetaCyc: PWY-6387 GYO_1866 29cf0d5353a97b39c78aaa9d0303503f 451 Gene3D G3DSA:3.90.190.20 316 449 2.2E-41 T 14-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 GYO_1866 29cf0d5353a97b39c78aaa9d0303503f 451 Gene3D G3DSA:3.40.1190.10 103 309 1.2E-62 T 14-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 GYO_1866 29cf0d5353a97b39c78aaa9d0303503f 451 Pfam PF08245 Mur ligase middle domain 118 292 3.5E-31 T 14-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 GYO_3551 c5530d246e46f201253805b0593f896d 412 TIGRFAM TIGR01879 hydantase: amidase, hydantoinase/carbamoylase family 12 410 1.6E-131 T 14-10-2018 IPR010158 Amidase, carbamoylase-type GO:0016813 GYO_3551 c5530d246e46f201253805b0593f896d 412 Pfam PF01546 Peptidase family M20/M25/M40 81 408 1.4E-31 T 14-10-2018 IPR002933 Peptidase M20 GO:0016787 GYO_3551 c5530d246e46f201253805b0593f896d 412 PIRSF PIRSF001235 6 412 3.3E-145 T 14-10-2018 IPR010158 Amidase, carbamoylase-type GO:0016813 GYO_3551 c5530d246e46f201253805b0593f896d 412 Gene3D G3DSA:3.30.70.360 215 329 9.3E-131 T 14-10-2018 GYO_3551 c5530d246e46f201253805b0593f896d 412 SUPERFAMILY SSF55031 215 331 2.09E-23 T 14-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain GYO_3551 c5530d246e46f201253805b0593f896d 412 SUPERFAMILY SSF53187 12 411 5.19E-83 T 14-10-2018 GYO_3551 c5530d246e46f201253805b0593f896d 412 Gene3D G3DSA:3.40.630.10 23 403 9.3E-131 T 14-10-2018 GYO_2576 0684cdc40dab6795fa7a27671f1bd34e 150 Pfam PF03862 SpoVAC/SpoVAEB sporulation membrane protein 24 141 1.2E-41 T 14-10-2018 IPR005562 SpoVA GYO_2576 0684cdc40dab6795fa7a27671f1bd34e 150 TIGRFAM TIGR02838 spore_V_AC: stage V sporulation protein AC 7 144 3.6E-65 T 14-10-2018 IPR014203 Sporulation stage V, protein AC GYO_2698 7cfe81915aaabafc9bc14903a1dcd778 206 TIGRFAM TIGR02896 spore_III_AF: stage III sporulation protein AF 3 111 3.2E-38 T 14-10-2018 IPR014245 Sporulation stage III, protein AF GYO_2698 7cfe81915aaabafc9bc14903a1dcd778 206 Pfam PF09581 Stage III sporulation protein AF (Spore_III_AF) 12 195 5.3E-40 T 14-10-2018 IPR014245 Sporulation stage III, protein AF GYO_3556 319d259a31c162d5ac273e1ca9984f0f 242 SMART SM00866 94 234 9.6E-30 T 14-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 GYO_3556 319d259a31c162d5ac273e1ca9984f0f 242 SUPERFAMILY SSF64288 61 238 3.43E-45 T 14-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily GYO_3556 319d259a31c162d5ac273e1ca9984f0f 242 Pfam PF00392 Bacterial regulatory proteins, gntR family 11 73 5.5E-21 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 GYO_3556 319d259a31c162d5ac273e1ca9984f0f 242 Gene3D G3DSA:1.10.10.10 8 77 2.3E-26 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily GYO_3556 319d259a31c162d5ac273e1ca9984f0f 242 SUPERFAMILY SSF46785 3 82 2.91E-22 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily GYO_3556 319d259a31c162d5ac273e1ca9984f0f 242 Pfam PF07702 UTRA domain 95 233 1.3E-33 T 14-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 GYO_3556 319d259a31c162d5ac273e1ca9984f0f 242 SMART SM00345 14 73 4.8E-21 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 GYO_3556 319d259a31c162d5ac273e1ca9984f0f 242 Gene3D G3DSA:3.40.1410.10 78 242 3.8E-41 T 14-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily GYO_3556 319d259a31c162d5ac273e1ca9984f0f 242 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 47 63 2.2E-9 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 GYO_3556 319d259a31c162d5ac273e1ca9984f0f 242 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 33 47 2.2E-9 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 GYO_4505 71d798468b4c3b261dc36ebbf4a2862f 303 Gene3D G3DSA:3.40.50.300 3 218 3.7E-125 T 14-10-2018 GYO_4505 71d798468b4c3b261dc36ebbf4a2862f 303 Pfam PF06071 Protein of unknown function (DUF933) 219 302 9.1E-40 T 14-10-2018 IPR013029 YchF, C-terminal domain Reactome: R-HSA-114608 GYO_4505 71d798468b4c3b261dc36ebbf4a2862f 303 Gene3D G3DSA:3.10.20.30 1 301 3.7E-125 T 14-10-2018 IPR012675 Beta-grasp domain superfamily GYO_4505 71d798468b4c3b261dc36ebbf4a2862f 303 Gene3D G3DSA:1.10.150.300 50 137 3.7E-125 T 14-10-2018 IPR023192 TGS-like domain superfamily Reactome: R-HSA-114608 GYO_4505 71d798468b4c3b261dc36ebbf4a2862f 303 Pfam PF01926 50S ribosome-binding GTPase 5 62 1.7E-6 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 GYO_4505 71d798468b4c3b261dc36ebbf4a2862f 303 TIGRFAM TIGR00092 TIGR00092: GTP-binding protein YchF 1 303 3.3E-122 T 14-10-2018 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 Reactome: R-HSA-114608 GYO_4505 71d798468b4c3b261dc36ebbf4a2862f 303 SUPERFAMILY SSF52540 3 241 7.37E-59 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase GYO_4505 71d798468b4c3b261dc36ebbf4a2862f 303 SUPERFAMILY SSF81271 219 300 5.01E-36 T 14-10-2018 IPR012676 TGS-like KEGG: 00970+6.1.1.3 GYO_4505 71d798468b4c3b261dc36ebbf4a2862f 303 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 24 42 4.7E-13 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 GYO_4505 71d798468b4c3b261dc36ebbf4a2862f 303 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 7 22 4.7E-13 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 GYO_0842 ca9a7f4d6fc25e4206b9a238c9bb0e50 465 SUPERFAMILY SSF51445 5 460 3.43E-165 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily GYO_0842 ca9a7f4d6fc25e4206b9a238c9bb0e50 465 Pfam PF00232 Glycosyl hydrolase family 1 7 464 1.3E-138 T 14-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 GYO_0842 ca9a7f4d6fc25e4206b9a238c9bb0e50 465 Gene3D G3DSA:3.20.20.80 7 464 8.0E-156 T 14-10-2018 GYO_0842 ca9a7f4d6fc25e4206b9a238c9bb0e50 465 PRINTS PR00131 Glycosyl hydrolase family 1 signature 433 445 2.6E-16 T 14-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 GYO_0842 ca9a7f4d6fc25e4206b9a238c9bb0e50 465 PRINTS PR00131 Glycosyl hydrolase family 1 signature 292 306 2.6E-16 T 14-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 GYO_0842 ca9a7f4d6fc25e4206b9a238c9bb0e50 465 PRINTS PR00131 Glycosyl hydrolase family 1 signature 388 399 2.6E-16 T 14-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 GYO_0842 ca9a7f4d6fc25e4206b9a238c9bb0e50 465 PRINTS PR00131 Glycosyl hydrolase family 1 signature 409 426 2.6E-16 T 14-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 GYO_0842 ca9a7f4d6fc25e4206b9a238c9bb0e50 465 PRINTS PR00131 Glycosyl hydrolase family 1 signature 364 372 2.6E-16 T 14-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 GYO_0842 ca9a7f4d6fc25e4206b9a238c9bb0e50 465 ProSitePatterns PS00572 Glycosyl hydrolases family 1 active site. 364 372 - T 14-10-2018 IPR018120 Glycoside hydrolase family 1, active site GYO_2679 25d6330fc0ce2fa3a82669154bc8da73 267 SUPERFAMILY SSF52172 2 127 1.04E-32 T 14-10-2018 IPR011006 CheY-like superfamily GYO_2679 25d6330fc0ce2fa3a82669154bc8da73 267 SUPERFAMILY SSF46894 150 265 3.66E-48 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 GYO_2679 25d6330fc0ce2fa3a82669154bc8da73 267 Pfam PF08769 Sporulation initiation factor Spo0A C terminal 157 260 7.2E-45 T 14-10-2018 IPR014879 Sporulation initiation factor Spo0A, C-terminal GO:0003700|GO:0005509|GO:0005737|GO:0006355|GO:0042173 GYO_2679 25d6330fc0ce2fa3a82669154bc8da73 267 TIGRFAM TIGR02875 spore_0_A: sporulation transcription factor Spo0A 2 267 1.6E-131 T 14-10-2018 IPR012052 Sporulation transcription factor Spo0A GO:0003677|GO:0005509|GO:0006355|GO:0043937|GO:0051606 GYO_2679 25d6330fc0ce2fa3a82669154bc8da73 267 Pfam PF00072 Response regulator receiver domain 6 119 1.2E-29 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 GYO_2679 25d6330fc0ce2fa3a82669154bc8da73 267 Gene3D G3DSA:3.40.50.2300 1 135 8.8E-33 T 14-10-2018 GYO_2679 25d6330fc0ce2fa3a82669154bc8da73 267 Gene3D G3DSA:1.10.10.10 148 267 1.3E-55 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily GYO_2679 25d6330fc0ce2fa3a82669154bc8da73 267 ProDom PD010908 TRANSCRIPTION SPORULATION TWO-COMPONENT DNA-BINDING PHOSPHORYLATION SENSORY REGULATION TRANSDUCTION METAL-BINDING CALCIUM 156 266 3.0E-59 T 14-10-2018 IPR014879 Sporulation initiation factor Spo0A, C-terminal GO:0003700|GO:0005509|GO:0005737|GO:0006355|GO:0042173 GYO_2679 25d6330fc0ce2fa3a82669154bc8da73 267 PIRSF PIRSF002937 1 267 4.6E-137 T 14-10-2018 IPR012052 Sporulation transcription factor Spo0A GO:0003677|GO:0005509|GO:0006355|GO:0043937|GO:0051606 GYO_2679 25d6330fc0ce2fa3a82669154bc8da73 267 SMART SM00448 4 119 2.9E-32 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 GYO_1198 4fdcb1e5b771bbffeb68786372335dec 67 PRINTS PR00050 Cold shock protein signature 4 19 7.4E-19 T 14-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 GYO_1198 4fdcb1e5b771bbffeb68786372335dec 67 PRINTS PR00050 Cold shock protein signature 24 33 7.4E-19 T 14-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 GYO_1198 4fdcb1e5b771bbffeb68786372335dec 67 PRINTS PR00050 Cold shock protein signature 39 57 7.4E-19 T 14-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 GYO_1198 4fdcb1e5b771bbffeb68786372335dec 67 Pfam PF00313 'Cold-shock' DNA-binding domain 3 65 4.1E-30 T 14-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 GYO_1198 4fdcb1e5b771bbffeb68786372335dec 67 Gene3D G3DSA:2.40.50.140 1 67 3.2E-31 T 14-10-2018 GYO_1198 4fdcb1e5b771bbffeb68786372335dec 67 ProSitePatterns PS00352 'Cold-shock' domain signature. 15 33 - T 14-10-2018 IPR019844 Cold-shock conserved site GYO_1198 4fdcb1e5b771bbffeb68786372335dec 67 SUPERFAMILY SSF50249 1 64 1.45E-24 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold GYO_1198 4fdcb1e5b771bbffeb68786372335dec 67 SMART SM00357 3 66 3.4E-30 T 14-10-2018 IPR011129 Cold shock domain GO:0003676 GYO_1198 4fdcb1e5b771bbffeb68786372335dec 67 PIRSF PIRSF002599 1 67 4.8E-24 T 14-10-2018 IPR012156 Cold shock, CspA GO:0003676 GYO_1966 2db71702c05ccf485eefa5ca23b5325e 691 Hamap MF_00952 DNA topoisomerase 1 [topA]. 3 642 56.353 T 14-10-2018 IPR028612 DNA topoisomerase I, type IA GO:0003677|GO:0003916|GO:0006265 GYO_1966 2db71702c05ccf485eefa5ca23b5325e 691 Pfam PF01751 Toprim domain 5 113 3.4E-30 T 14-10-2018 IPR006171 TOPRIM domain GYO_1966 2db71702c05ccf485eefa5ca23b5325e 691 SMART SM00437 242 510 3.7E-141 T 14-10-2018 IPR003602 DNA topoisomerase, type IA, DNA-binding domain GO:0003677|GO:0003916|GO:0006265 GYO_1966 2db71702c05ccf485eefa5ca23b5325e 691 Gene3D G3DSA:3.40.50.140 1 134 1.6E-54 T 14-10-2018 GYO_1966 2db71702c05ccf485eefa5ca23b5325e 691 ProSitePatterns PS00396 Prokaryotic DNA topoisomerase I active site. 279 302 - T 14-10-2018 IPR023406 DNA topoisomerase, type IA, active site GO:0003917 GYO_1966 2db71702c05ccf485eefa5ca23b5325e 691 Gene3D G3DSA:1.10.290.10 250 385 5.0E-170 T 14-10-2018 IPR013826 DNA topoisomerase, type IA, central region, subdomain 3 GYO_1966 2db71702c05ccf485eefa5ca23b5325e 691 TIGRFAM TIGR01051 topA_bact: DNA topoisomerase I 5 611 6.3E-280 T 14-10-2018 IPR005733 DNA topoisomerase I, bacterial-type GO:0003677|GO:0003917|GO:0006265 GYO_1966 2db71702c05ccf485eefa5ca23b5325e 691 SMART SM00493 3 103 3.4E-34 T 14-10-2018 IPR006171 TOPRIM domain GYO_1966 2db71702c05ccf485eefa5ca23b5325e 691 Gene3D G3DSA:3.30.65.10 559 617 3.5E-13 T 14-10-2018 GYO_1966 2db71702c05ccf485eefa5ca23b5325e 691 Gene3D G3DSA:1.10.460.10 135 550 5.0E-170 T 14-10-2018 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 GYO_1966 2db71702c05ccf485eefa5ca23b5325e 691 SMART SM00436 104 192 6.2E-54 T 14-10-2018 IPR003601 DNA topoisomerase, type IA, domain 2 GO:0003677|GO:0003916|GO:0006265 GYO_1966 2db71702c05ccf485eefa5ca23b5325e 691 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 370 386 2.2E-37 T 14-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 GYO_1966 2db71702c05ccf485eefa5ca23b5325e 691 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 473 487 2.2E-37 T 14-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 GYO_1966 2db71702c05ccf485eefa5ca23b5325e 691 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 77 90 2.2E-37 T 14-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 GYO_1966 2db71702c05ccf485eefa5ca23b5325e 691 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 293 302 2.2E-37 T 14-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 GYO_1966 2db71702c05ccf485eefa5ca23b5325e 691 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 162 180 2.2E-37 T 14-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 GYO_1966 2db71702c05ccf485eefa5ca23b5325e 691 Pfam PF01131 DNA topoisomerase 128 547 3.1E-139 T 14-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 GYO_1966 2db71702c05ccf485eefa5ca23b5325e 691 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 658 689 0.019 T 14-10-2018 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 GYO_1966 2db71702c05ccf485eefa5ca23b5325e 691 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 576 613 1.9E-15 T 14-10-2018 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 GYO_1966 2db71702c05ccf485eefa5ca23b5325e 691 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 616 655 9.5E-15 T 14-10-2018 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 GYO_1966 2db71702c05ccf485eefa5ca23b5325e 691 Gene3D G3DSA:2.70.20.10 184 457 5.0E-170 T 14-10-2018 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 GYO_1966 2db71702c05ccf485eefa5ca23b5325e 691 SUPERFAMILY SSF56712 4 665 8.63E-204 T 14-10-2018 IPR023405 DNA topoisomerase, type IA, core domain GYO_1966 2db71702c05ccf485eefa5ca23b5325e 691 SUPERFAMILY SSF57783 569 613 1.24E-13 T 14-10-2018 GYO_0521 7fb811314f0b93b04dc7bfe637dc5a3d 253 SUPERFAMILY SSF53335 28 206 1.22E-42 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase GYO_0521 7fb811314f0b93b04dc7bfe637dc5a3d 253 Pfam PF08241 Methyltransferase domain 42 137 3.0E-26 T 14-10-2018 IPR013216 Methyltransferase type 11 GO:0008168 GYO_0521 7fb811314f0b93b04dc7bfe637dc5a3d 253 Gene3D G3DSA:3.40.50.150 20 253 1.4E-74 T 14-10-2018 GYO_3799 9b8ad9135470dfcacb629c5dc6fbf9c6 107 PIRSF PIRSF036521 2 107 1.1E-55 T 14-10-2018 IPR011411 NTP Pyrophosphohydrolase MazG-related GYO_3799 9b8ad9135470dfcacb629c5dc6fbf9c6 107 SUPERFAMILY SSF101386 2 106 1.68E-24 T 14-10-2018 GYO_3799 9b8ad9135470dfcacb629c5dc6fbf9c6 107 Pfam PF03819 MazG nucleotide pyrophosphohydrolase domain 32 106 1.2E-11 T 14-10-2018 IPR004518 NTP pyrophosphohydrolase MazG, putative catalytic core GYO_3799 9b8ad9135470dfcacb629c5dc6fbf9c6 107 Gene3D G3DSA:1.10.287.1080 2 103 2.8E-28 T 14-10-2018 GYO_2946 4cd1102dddfc1f92f20b8aedfbbee462 462 PIRSF PIRSF006060 4 461 1.4E-66 T 14-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 GYO_2946 4cd1102dddfc1f92f20b8aedfbbee462 462 Pfam PF00324 Amino acid permease 24 459 4.5E-111 T 14-10-2018 IPR004841 Amino acid permease/ SLC12A domain GO:0016020|GO:0055085 GYO_2946 4cd1102dddfc1f92f20b8aedfbbee462 462 Gene3D G3DSA:1.20.1740.10 16 462 6.4E-64 T 14-10-2018 GYO_2559 c0802f7690b6b787cc76c1df70d36183 398 PIRSF PIRSF001259 1 398 1.4E-193 T 14-10-2018 GYO_2559 c0802f7690b6b787cc76c1df70d36183 398 Pfam PF00925 GTP cyclohydrolase II 206 372 3.4E-76 T 14-10-2018 IPR032677 GTP cyclohydrolase II KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 GYO_2559 c0802f7690b6b787cc76c1df70d36183 398 TIGRFAM TIGR00506 ribB: 3,4-dihydroxy-2-butanone-4-phosphate synthase 1 197 5.1E-87 T 14-10-2018 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 GYO_2559 c0802f7690b6b787cc76c1df70d36183 398 TIGRFAM TIGR00505 ribA: GTP cyclohydrolase II 206 396 1.5E-80 T 14-10-2018 IPR000926 GTP cyclohydrolase II, RibA GO:0003935|GO:0009231 KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 GYO_2559 c0802f7690b6b787cc76c1df70d36183 398 Gene3D G3DSA:3.90.870.10 1 202 7.0E-89 T 14-10-2018 GYO_2559 c0802f7690b6b787cc76c1df70d36183 398 Gene3D G3DSA:3.40.50.10990 203 375 7.5E-77 T 14-10-2018 IPR036144 RibA-like superfamily KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 GYO_2559 c0802f7690b6b787cc76c1df70d36183 398 SUPERFAMILY SSF55821 2 199 2.98E-85 T 14-10-2018 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily GYO_2559 c0802f7690b6b787cc76c1df70d36183 398 Hamap MF_00180 3,4-dihydroxy-2-butanone 4-phosphate synthase [ribB]. 1 201 38.318 T 14-10-2018 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 GYO_2559 c0802f7690b6b787cc76c1df70d36183 398 SUPERFAMILY SSF142695 203 375 8.11E-73 T 14-10-2018 IPR036144 RibA-like superfamily KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 GYO_2559 c0802f7690b6b787cc76c1df70d36183 398 Pfam PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase 6 196 1.2E-85 T 14-10-2018 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 GYO_2559 c0802f7690b6b787cc76c1df70d36183 398 Hamap MF_00179 GTP cyclohydrolase-2 [ribA]. 202 398 42.382 T 14-10-2018 IPR000926 GTP cyclohydrolase II, RibA GO:0003935|GO:0009231 KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 GYO_2559 c0802f7690b6b787cc76c1df70d36183 398 Hamap MF_01283 Riboflavin biosynthesis protein RibBA [ribBA]. 1 394 58.13 T 14-10-2018 IPR016299 Riboflavin biosynthesis protein RibBA GO:0009231 KEGG: 00740+3.5.4.25+4.1.99.12|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6167|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 GYO_1055 6450d76996356e2318e1a48a32cb68ef 156 SUPERFAMILY SSF52788 1 150 2.09E-47 T 14-10-2018 IPR036196 Phosphotyrosine protein phosphatase I superfamily GYO_1055 6450d76996356e2318e1a48a32cb68ef 156 Gene3D G3DSA:3.40.50.2300 1 156 2.6E-67 T 14-10-2018 GYO_1055 6450d76996356e2318e1a48a32cb68ef 156 SMART SM00226 2 149 6.3E-63 T 14-10-2018 IPR023485 Phosphotyrosine protein phosphatase I GYO_1055 6450d76996356e2318e1a48a32cb68ef 156 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 81 96 4.0E-17 T 14-10-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 GYO_1055 6450d76996356e2318e1a48a32cb68ef 156 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 123 138 4.0E-17 T 14-10-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 GYO_1055 6450d76996356e2318e1a48a32cb68ef 156 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 4 21 4.0E-17 T 14-10-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 GYO_1055 6450d76996356e2318e1a48a32cb68ef 156 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 47 63 4.0E-17 T 14-10-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 GYO_1055 6450d76996356e2318e1a48a32cb68ef 156 Pfam PF01451 Low molecular weight phosphotyrosine protein phosphatase 4 147 1.2E-45 T 14-10-2018 IPR023485 Phosphotyrosine protein phosphatase I GYO_0124 d44d05a2aadd0950a7a7f05aea77904a 249 TIGRFAM TIGR00186 rRNA_methyl_3: RNA methyltransferase, TrmH family, group 3 5 244 1.7E-94 T 14-10-2018 IPR004441 RNA methyltransferase TrmH family GO:0006396|GO:0008173 Reactome: R-HSA-6793080 GYO_0124 d44d05a2aadd0950a7a7f05aea77904a 249 Pfam PF00588 SpoU rRNA Methylase family 98 238 2.2E-39 T 14-10-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 GYO_0124 d44d05a2aadd0950a7a7f05aea77904a 249 SUPERFAMILY SSF55315 2 78 1.77E-19 T 14-10-2018 IPR029064 50S ribosomal protein L30e-like GYO_0124 d44d05a2aadd0950a7a7f05aea77904a 249 SMART SM00967 7 81 2.7E-20 T 14-10-2018 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 Reactome: R-HSA-6793080 GYO_0124 d44d05a2aadd0950a7a7f05aea77904a 249 Pfam PF08032 RNA 2'-O ribose methyltransferase substrate binding 7 81 1.8E-22 T 14-10-2018 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 Reactome: R-HSA-6793080 GYO_0124 d44d05a2aadd0950a7a7f05aea77904a 249 SUPERFAMILY SSF75217 69 245 2.88E-49 T 14-10-2018 IPR029028 Alpha/beta knot methyltransferases GYO_0124 d44d05a2aadd0950a7a7f05aea77904a 249 Gene3D G3DSA:3.40.1280.10 77 245 1.1E-57 T 14-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal GYO_0124 d44d05a2aadd0950a7a7f05aea77904a 249 Gene3D G3DSA:3.30.1330.30 1 76 1.2E-14 T 14-10-2018 IPR029064 50S ribosomal protein L30e-like GYO_1650 0abdd415ca953fcf595b0efb17ea164f 226 Gene3D G3DSA:3.10.450.40 160 226 9.2E-13 T 14-10-2018 GYO_1650 0abdd415ca953fcf595b0efb17ea164f 226 Pfam PF03413 Peptidase propeptide and YPEB domain 99 145 0.0062 T 14-10-2018 IPR025711 PepSY domain GYO_1650 0abdd415ca953fcf595b0efb17ea164f 226 Pfam PF03413 Peptidase propeptide and YPEB domain 164 219 4.6E-11 T 14-10-2018 IPR025711 PepSY domain GYO_3740 54879ab8a14dab591aac31ebe5f14c99 245 PIRSF PIRSF006648 9 244 5.8E-21 T 14-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 GYO_3740 54879ab8a14dab591aac31ebe5f14c99 245 Pfam PF12698 ABC-2 family transporter protein 52 235 7.6E-16 T 14-10-2018 GYO_2625 41f8d14fcda6d47bc35ba21b9cb485e8 338 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 4 326 5.7E-115 T 14-10-2018 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 GYO_2625 41f8d14fcda6d47bc35ba21b9cb485e8 338 Gene3D G3DSA:3.20.20.70 1 338 8.6E-133 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 GYO_2625 41f8d14fcda6d47bc35ba21b9cb485e8 338 Hamap MF_01614 NADPH dehydrogenase [namA]. 2 338 69.39 T 14-10-2018 IPR023663 NADPH dehydrogenase GO:0003959|GO:0055114 GYO_2625 41f8d14fcda6d47bc35ba21b9cb485e8 338 SUPERFAMILY SSF51395 4 334 7.09E-116 T 14-10-2018 GYO_4314 a09feabb8d7b60dbe447071396ba1a7b 473 Pfam PF00232 Glycosyl hydrolase family 1 8 468 6.6E-159 T 14-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 GYO_4314 a09feabb8d7b60dbe447071396ba1a7b 473 PRINTS PR00131 Glycosyl hydrolase family 1 signature 367 375 2.9E-16 T 14-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 GYO_4314 a09feabb8d7b60dbe447071396ba1a7b 473 PRINTS PR00131 Glycosyl hydrolase family 1 signature 409 426 2.9E-16 T 14-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 GYO_4314 a09feabb8d7b60dbe447071396ba1a7b 473 PRINTS PR00131 Glycosyl hydrolase family 1 signature 433 445 2.9E-16 T 14-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 GYO_4314 a09feabb8d7b60dbe447071396ba1a7b 473 PRINTS PR00131 Glycosyl hydrolase family 1 signature 388 399 2.9E-16 T 14-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 GYO_4314 a09feabb8d7b60dbe447071396ba1a7b 473 PRINTS PR00131 Glycosyl hydrolase family 1 signature 289 303 2.9E-16 T 14-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 GYO_4314 a09feabb8d7b60dbe447071396ba1a7b 473 ProSitePatterns PS00653 Glycosyl hydrolases family 1 N-terminal signature. 13 27 - T 14-10-2018 IPR033132 Glycosyl hydrolases family 1, N-terminal conserved site GYO_4314 a09feabb8d7b60dbe447071396ba1a7b 473 ProSitePatterns PS00572 Glycosyl hydrolases family 1 active site. 367 375 - T 14-10-2018 IPR018120 Glycoside hydrolase family 1, active site GYO_4314 a09feabb8d7b60dbe447071396ba1a7b 473 SUPERFAMILY SSF51445 7 468 3.31E-166 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily GYO_4314 a09feabb8d7b60dbe447071396ba1a7b 473 Gene3D G3DSA:3.20.20.80 2 470 6.0E-164 T 14-10-2018 GYO_0560 1f6689db25121d3b59536e912ebbe9bf 120 SUPERFAMILY SSF46785 3 106 7.71E-33 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily GYO_0560 1f6689db25121d3b59536e912ebbe9bf 120 Gene3D G3DSA:1.10.10.10 2 118 1.8E-39 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily GYO_0560 1f6689db25121d3b59536e912ebbe9bf 120 Pfam PF01638 HxlR-like helix-turn-helix 19 107 8.9E-40 T 14-10-2018 IPR002577 Helix-turn-helix, HxlR type GYO_3466 927941300965b7ecd38952cf55ce3f45 490 TIGRFAM TIGR01513 NAPRTase_put: nicotinate phosphoribosyltransferase 12 467 3.5E-182 T 14-10-2018 IPR006405 Nicotinate phosphoribosyltransferase pncB-type GO:0004516|GO:0019358 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|Reactome: R-HSA-197264|Reactome: R-HSA-6798695 GYO_3466 927941300965b7ecd38952cf55ce3f45 490 Pfam PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family 160 349 3.3E-13 T 14-10-2018 IPR007229 Nicotinate phosphoribosyltransferase family KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|Reactome: R-HSA-197264 GYO_3466 927941300965b7ecd38952cf55ce3f45 490 SUPERFAMILY SSF54675 9 141 8.39E-49 T 14-10-2018 GYO_3466 927941300965b7ecd38952cf55ce3f45 490 Gene3D G3DSA:3.20.140.10 13 472 8.0E-207 T 14-10-2018 GYO_3466 927941300965b7ecd38952cf55ce3f45 490 SUPERFAMILY SSF51690 142 480 8.68E-131 T 14-10-2018 IPR036068 Nicotinate phosphoribosyltransferase-like, C-terminal GO:0004514|GO:0009435 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381 GYO_3466 927941300965b7ecd38952cf55ce3f45 490 PIRSF PIRSF000484 6 482 2.6E-156 T 14-10-2018 IPR007229 Nicotinate phosphoribosyltransferase family KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|Reactome: R-HSA-197264 GYO_3466 927941300965b7ecd38952cf55ce3f45 490 Gene3D G3DSA:3.20.20.70 154 321 8.0E-207 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 GYO_1188 9ab41fbdc18328342f8aede9bf3b378a 154 Gene3D G3DSA:1.10.10.10 1 147 1.1E-24 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily GYO_1188 9ab41fbdc18328342f8aede9bf3b378a 154 SUPERFAMILY SSF46785 10 145 1.2E-24 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily GYO_1188 9ab41fbdc18328342f8aede9bf3b378a 154 Pfam PF01047 MarR family 38 96 2.8E-15 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 GYO_1188 9ab41fbdc18328342f8aede9bf3b378a 154 PRINTS PR00598 Bacterial regulatory protein MarR family signature 121 141 8.9E-7 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 GYO_1188 9ab41fbdc18328342f8aede9bf3b378a 154 PRINTS PR00598 Bacterial regulatory protein MarR family signature 91 107 8.9E-7 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 GYO_1188 9ab41fbdc18328342f8aede9bf3b378a 154 PRINTS PR00598 Bacterial regulatory protein MarR family signature 72 87 8.9E-7 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 GYO_1188 9ab41fbdc18328342f8aede9bf3b378a 154 SMART SM00347 31 131 4.6E-27 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 GYO_2007 8f38c51fb5e5effcffc181a3a4574f69 185 Gene3D G3DSA:3.30.1360.40 31 105 1.5E-71 T 14-10-2018 GYO_2007 8f38c51fb5e5effcffc181a3a4574f69 185 TIGRFAM TIGR00496 frr: ribosome recycling factor 10 185 1.7E-82 T 14-10-2018 IPR002661 Ribosome recycling factor GO:0006412 Reactome: R-HSA-5419276 GYO_2007 8f38c51fb5e5effcffc181a3a4574f69 185 Pfam PF01765 Ribosome recycling factor 21 183 7.5E-67 T 14-10-2018 IPR023584 Ribosome recycling factor domain Reactome: R-HSA-5419276 GYO_2007 8f38c51fb5e5effcffc181a3a4574f69 185 SUPERFAMILY SSF55194 4 184 1.96E-73 T 14-10-2018 IPR036191 RRF superfamily Reactome: R-HSA-5419276 GYO_2007 8f38c51fb5e5effcffc181a3a4574f69 185 Gene3D G3DSA:1.10.132.20 12 182 1.5E-71 T 14-10-2018 GYO_2007 8f38c51fb5e5effcffc181a3a4574f69 185 Hamap MF_00040 Ribosome-recycling factor [frr]. 3 185 29.165 T 14-10-2018 IPR002661 Ribosome recycling factor GO:0006412 Reactome: R-HSA-5419276 GYO_3065 17b477264e573652433b7b8fdbc5803d 552 Gene3D G3DSA:3.40.50.300 53 263 4.3E-33 T 14-10-2018 GYO_3065 17b477264e573652433b7b8fdbc5803d 552 SMART SM00382 89 267 1.4E-13 T 14-10-2018 IPR003593 AAA+ ATPase domain GYO_3065 17b477264e573652433b7b8fdbc5803d 552 Gene3D G3DSA:3.30.230.10 346 549 2.6E-52 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup GYO_3065 17b477264e573652433b7b8fdbc5803d 552 ProSitePatterns PS01046 ATP-dependent serine proteases, lon family, serine active site. 442 450 - T 14-10-2018 IPR008268 Peptidase S16, active site GO:0004176|GO:0004252|GO:0006508 GYO_3065 17b477264e573652433b7b8fdbc5803d 552 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 352 368 2.3E-32 T 14-10-2018 GYO_3065 17b477264e573652433b7b8fdbc5803d 552 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 439 458 2.3E-32 T 14-10-2018 GYO_3065 17b477264e573652433b7b8fdbc5803d 552 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 97 116 2.3E-32 T 14-10-2018 GYO_3065 17b477264e573652433b7b8fdbc5803d 552 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 469 488 2.3E-32 T 14-10-2018 GYO_3065 17b477264e573652433b7b8fdbc5803d 552 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 492 510 2.3E-32 T 14-10-2018 GYO_3065 17b477264e573652433b7b8fdbc5803d 552 Pfam PF05362 Lon protease (S16) C-terminal proteolytic domain 343 534 1.9E-33 T 14-10-2018 IPR008269 Peptidase S16, Lon proteolytic domain GO:0004176|GO:0004252|GO:0006508 GYO_3065 17b477264e573652433b7b8fdbc5803d 552 SUPERFAMILY SSF54211 350 532 3.45E-42 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold GYO_3065 17b477264e573652433b7b8fdbc5803d 552 TIGRFAM TIGR02902 spore_lonB: ATP-dependent protease LonB 5 533 3.6E-296 T 14-10-2018 IPR014251 Sporulation protease LonB GYO_3065 17b477264e573652433b7b8fdbc5803d 552 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 93 266 4.8E-19 T 14-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 GYO_3065 17b477264e573652433b7b8fdbc5803d 552 SUPERFAMILY SSF52540 56 328 5.4E-47 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase GYO_2580 6500be7aac204f093cdcddd1f8262bb3 146 SMART SM00387 35 140 4.1E-10 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase GYO_2580 6500be7aac204f093cdcddd1f8262bb3 146 Hamap MF_00637 Anti-sigma F factor [spoIIAB]. 1 140 36.11 T 14-10-2018 IPR010194 Anti-sigma F factor GO:0004674|GO:0005524|GO:0006468|GO:0016989|GO:0042174|GO:0045892 KEGG: 04150+2.7.11.1|KEGG: 04151+2.7.11.1|KEGG: 04714+2.7.11.1|KEGG: 04926+2.7.11.1|KEGG: 05163+2.7.11.1|KEGG: 05165+2.7.11.1|KEGG: 05170+2.7.11.1 GYO_2580 6500be7aac204f093cdcddd1f8262bb3 146 SUPERFAMILY SSF55874 28 135 3.67E-24 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily GYO_2580 6500be7aac204f093cdcddd1f8262bb3 146 Pfam PF13581 Histidine kinase-like ATPase domain 10 136 1.8E-23 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase GYO_2580 6500be7aac204f093cdcddd1f8262bb3 146 Gene3D G3DSA:3.30.565.10 1 143 1.7E-34 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily GYO_2580 6500be7aac204f093cdcddd1f8262bb3 146 TIGRFAM TIGR01925 spIIAB: anti-sigma F factor 1 137 1.5E-78 T 14-10-2018 IPR010194 Anti-sigma F factor GO:0004674|GO:0005524|GO:0006468|GO:0016989|GO:0042174|GO:0045892 KEGG: 04150+2.7.11.1|KEGG: 04151+2.7.11.1|KEGG: 04714+2.7.11.1|KEGG: 04926+2.7.11.1|KEGG: 05163+2.7.11.1|KEGG: 05165+2.7.11.1|KEGG: 05170+2.7.11.1 GYO_4170 5fd9aafcd4329a19e52f007416768015 315 Pfam PF16363 GDP-mannose 4,6 dehydratase 6 306 5.1E-81 T 14-10-2018 IPR016040 NAD(P)-binding domain GYO_4170 5fd9aafcd4329a19e52f007416768015 315 SUPERFAMILY SSF51735 1 313 1.12E-91 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily GYO_4170 5fd9aafcd4329a19e52f007416768015 315 Gene3D G3DSA:3.90.25.10 193 313 8.2E-120 T 14-10-2018 GYO_4170 5fd9aafcd4329a19e52f007416768015 315 Gene3D G3DSA:3.40.50.720 5 305 8.2E-120 T 14-10-2018 GYO_4170 5fd9aafcd4329a19e52f007416768015 315 TIGRFAM TIGR01181 dTDP_gluc_dehyt: dTDP-glucose 4,6-dehydratase 5 314 3.9E-148 T 14-10-2018 IPR005888 dTDP-glucose 4,6-dehydratase GO:0008460|GO:0009225 KEGG: 00521+4.2.1.46|KEGG: 00523+4.2.1.46|KEGG: 00525+4.2.1.46|MetaCyc: PWY-3221|MetaCyc: PWY-6808|MetaCyc: PWY-6942|MetaCyc: PWY-6953|MetaCyc: PWY-6973|MetaCyc: PWY-6974|MetaCyc: PWY-6976|MetaCyc: PWY-7104|MetaCyc: PWY-7301|MetaCyc: PWY-7312|MetaCyc: PWY-7315|MetaCyc: PWY-7316|MetaCyc: PWY-7318|MetaCyc: PWY-7413|MetaCyc: PWY-7414|MetaCyc: PWY-7440|MetaCyc: PWY-7657|MetaCyc: PWY-7688|MetaCyc: PWY-7814 GYO_2558 624b05f4e2c4a58c861184d3aef71ae5 154 Hamap MF_00178 6,7-dimethyl-8-ribityllumazine synthase [ribH]. 8 153 30.392 T 14-10-2018 IPR034964 Lumazine synthase GO:0000906|GO:0009231 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 GYO_2558 624b05f4e2c4a58c861184d3aef71ae5 154 TIGRFAM TIGR00114 lumazine-synth: 6,7-dimethyl-8-ribityllumazine synthase 13 149 2.5E-62 T 14-10-2018 IPR034964 Lumazine synthase GO:0000906|GO:0009231 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 GYO_2558 624b05f4e2c4a58c861184d3aef71ae5 154 Gene3D G3DSA:3.40.50.960 1 154 1.1E-67 T 14-10-2018 IPR036467 Lumazine/riboflavin synthase superfamily GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 GYO_2558 624b05f4e2c4a58c861184d3aef71ae5 154 Pfam PF00885 6,7-dimethyl-8-ribityllumazine synthase 12 150 4.8E-60 T 14-10-2018 IPR002180 Lumazine/riboflavin synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 GYO_2558 624b05f4e2c4a58c861184d3aef71ae5 154 SUPERFAMILY SSF52121 3 153 1.44E-63 T 14-10-2018 IPR036467 Lumazine/riboflavin synthase superfamily GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 GYO_0646 581b8077edafa59958f4523a55a69926 283 SUPERFAMILY SSF55073 138 275 3.84E-17 T 14-10-2018 IPR029787 Nucleotide cyclase GYO_0646 581b8077edafa59958f4523a55a69926 283 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 133 276 5.6E-16 T 14-10-2018 IPR000160 GGDEF domain GYO_0646 581b8077edafa59958f4523a55a69926 283 SMART SM00267 121 283 3.1E-27 T 14-10-2018 IPR000160 GGDEF domain GYO_0646 581b8077edafa59958f4523a55a69926 283 Pfam PF00990 Diguanylate cyclase, GGDEF domain 133 279 5.3E-29 T 14-10-2018 IPR000160 GGDEF domain GYO_0646 581b8077edafa59958f4523a55a69926 283 Gene3D G3DSA:3.30.70.270 134 282 8.1E-21 T 14-10-2018 GYO_1883 08637c7d5885b4d99d0dc3ce7fabc855 81 TIGRFAM TIGR02888 spore_YlmC_YmxH: sporulation protein, YlmC/YmxH family 4 75 3.1E-27 T 14-10-2018 IPR014238 Sporulation protein YlmC/YmxH GYO_1883 08637c7d5885b4d99d0dc3ce7fabc855 81 SUPERFAMILY SSF50346 1 74 5.49E-15 T 14-10-2018 IPR011033 PRC-barrel-like superfamily GYO_1883 08637c7d5885b4d99d0dc3ce7fabc855 81 Gene3D G3DSA:2.30.30.240 1 78 1.8E-12 T 14-10-2018 GYO_1883 08637c7d5885b4d99d0dc3ce7fabc855 81 Pfam PF05239 PRC-barrel domain 2 75 8.1E-15 T 14-10-2018 IPR027275 PRC-barrel domain GYO_3568 50f5cec29c73e074f6c2717ce7e2a6d6 147 TIGRFAM TIGR01994 SUF_scaf_2: SUF system FeS assembly protein, NifU family 7 140 3.5E-59 T 14-10-2018 GYO_3568 50f5cec29c73e074f6c2717ce7e2a6d6 147 Gene3D G3DSA:3.90.1010.10 1 147 1.9E-65 T 14-10-2018 GYO_3568 50f5cec29c73e074f6c2717ce7e2a6d6 147 Pfam PF01592 NifU-like N terminal domain 11 128 3.7E-40 T 14-10-2018 IPR002871 NIF system FeS cluster assembly, NifU, N-terminal GO:0005506|GO:0016226|GO:0051536 Reactome: R-HSA-1362409 GYO_3568 50f5cec29c73e074f6c2717ce7e2a6d6 147 SUPERFAMILY SSF82649 2 142 4.97E-52 T 14-10-2018 GYO_0884 48227eb54e1c859ec9da0092d8ba42d4 69 Pfam PF14169 Cold-inducible protein YdjO 2 59 1.2E-27 T 14-10-2018 IPR025916 Cold-inducible protein YdjO GYO_1200 cc044b9e37279c7d82714ff8c7c43391 359 Pfam PF00990 Diguanylate cyclase, GGDEF domain 192 351 6.2E-52 T 14-10-2018 IPR000160 GGDEF domain GYO_1200 cc044b9e37279c7d82714ff8c7c43391 359 SMART SM00267 181 355 9.4E-72 T 14-10-2018 IPR000160 GGDEF domain GYO_1200 cc044b9e37279c7d82714ff8c7c43391 359 SUPERFAMILY SSF55073 197 356 3.37E-49 T 14-10-2018 IPR029787 Nucleotide cyclase GYO_1200 cc044b9e37279c7d82714ff8c7c43391 359 Pfam PF07694 5TMR of 5TMR-LYT 21 175 1.9E-17 T 14-10-2018 IPR011620 Signal transduction histidine kinase, 5TM receptor LytS, transmembrane region GO:0000155|GO:0000160|GO:0004673|GO:0016021|GO:0071555 GYO_1200 cc044b9e37279c7d82714ff8c7c43391 359 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 189 354 2.7E-52 T 14-10-2018 IPR000160 GGDEF domain GYO_1200 cc044b9e37279c7d82714ff8c7c43391 359 Gene3D G3DSA:3.30.70.270 186 359 3.4E-56 T 14-10-2018 GYO_2715 78f4fc693feed118feb332c821692b58 488 Gene3D G3DSA:3.40.640.10 86 314 8.8E-59 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 GYO_2715 78f4fc693feed118feb332c821692b58 488 Hamap MF_00713 Probable glycine dehydrogenase (decarboxylating) subunit 2 [gcvPB]. 7 485 60.396 T 14-10-2018 IPR023012 Probable glycine dehydrogenase (decarboxylating) subunit 2 GO:0004375|GO:0019464 KEGG: 00260+1.4.4.2 GYO_2715 78f4fc693feed118feb332c821692b58 488 SUPERFAMILY SSF53383 11 483 1.35E-115 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase GYO_2715 78f4fc693feed118feb332c821692b58 488 Pfam PF02347 Glycine cleavage system P-protein 49 298 6.5E-10 T 14-10-2018 IPR020581 Glycine cleavage system P protein GO:0004375|GO:0006546|GO:0055114 KEGG: 00260+1.4.4.2|Reactome: R-HSA-6783984 GYO_2715 78f4fc693feed118feb332c821692b58 488 Gene3D G3DSA:3.90.1150.10 338 470 3.4E-48 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 GYO_1540 63de844da4cd503b8db86c9f80a2a8d5 459 Gene3D G3DSA:1.20.1250.20 24 438 1.2E-26 T 14-10-2018 GYO_1540 63de844da4cd503b8db86c9f80a2a8d5 459 TIGRFAM TIGR00792 gph: sugar (Glycoside-Pentoside-Hexuronide) transporter 23 458 2.1E-157 T 14-10-2018 IPR001927 Sodium:galactoside symporter GO:0005215|GO:0006814|GO:0016020 GYO_1540 63de844da4cd503b8db86c9f80a2a8d5 459 ProSitePatterns PS00872 Sodium:galactoside symporter family signature. 74 101 - T 14-10-2018 IPR018043 Sodium:galactoside symporter, conserved site GO:0005215|GO:0006814|GO:0016020 GYO_1540 63de844da4cd503b8db86c9f80a2a8d5 459 SUPERFAMILY SSF103473 24 447 1.7E-39 T 14-10-2018 IPR036259 MFS transporter superfamily GYO_1540 63de844da4cd503b8db86c9f80a2a8d5 459 Pfam PF13347 MFS/sugar transport protein 25 445 5.9E-97 T 14-10-2018 GYO_2661 53e20735e0d16a5cc07c701b0bf69bda 287 ProSitePatterns PS00067 3-hydroxyacyl-CoA dehydrogenase signature. 183 208 - T 14-10-2018 IPR006180 3-hydroxyacyl-CoA dehydrogenase, conserved site GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 GYO_2661 53e20735e0d16a5cc07c701b0bf69bda 287 PIRSF PIRSF000105 1 287 1.8E-95 T 14-10-2018 IPR022694 3-hydroxyacyl-CoA dehydrogenase GO:0003857|GO:0006631|GO:0055114|GO:0070403 GYO_2661 53e20735e0d16a5cc07c701b0bf69bda 287 SUPERFAMILY SSF48179 185 285 1.96E-35 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 GYO_2661 53e20735e0d16a5cc07c701b0bf69bda 287 Pfam PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 6 183 1.2E-66 T 14-10-2018 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 GYO_2661 53e20735e0d16a5cc07c701b0bf69bda 287 SUPERFAMILY SSF51735 1 185 2.2E-59 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily GYO_2661 53e20735e0d16a5cc07c701b0bf69bda 287 Gene3D G3DSA:1.10.1040.10 189 287 2.6E-36 T 14-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 GYO_2661 53e20735e0d16a5cc07c701b0bf69bda 287 Gene3D G3DSA:3.40.50.720 3 188 7.0E-71 T 14-10-2018 GYO_2661 53e20735e0d16a5cc07c701b0bf69bda 287 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 186 282 1.1E-36 T 14-10-2018 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 GYO_3439 7370dd618d751085ccef28ebf87354d9 137 Pfam PF04134 Protein of unknown function, DUF393 11 120 2.2E-37 T 14-10-2018 IPR007263 Protein of unknown function DUF393 GYO_3812 fa717038704f78c290cdaf54acafb146 295 Gene3D G3DSA:3.40.50.300 5 176 4.9E-5 T 14-10-2018 GYO_3812 fa717038704f78c290cdaf54acafb146 295 Hamap MF_00636 RNase adapter protein RapZ [rapZ]. 9 291 42.262 T 14-10-2018 IPR005337 RapZ-like family GO:0005524 GYO_3812 fa717038704f78c290cdaf54acafb146 295 Pfam PF03668 P-loop ATPase protein family 9 292 1.8E-145 T 14-10-2018 IPR005337 RapZ-like family GO:0005524 GYO_3812 fa717038704f78c290cdaf54acafb146 295 SUPERFAMILY SSF52540 11 166 8.88E-13 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase GYO_3812 fa717038704f78c290cdaf54acafb146 295 PIRSF PIRSF005052 9 294 5.0E-111 T 14-10-2018 IPR005337 RapZ-like family GO:0005524 GYO_1505 1dc0584ab79ab7879d8238f8316321fc 315 Gene3D G3DSA:2.60.120.10 1 225 2.0E-95 T 14-10-2018 IPR014710 RmlC-like jelly roll fold GYO_1505 1dc0584ab79ab7879d8238f8316321fc 315 Pfam PF01238 Phosphomannose isomerase type I 8 196 1.5E-39 T 14-10-2018 IPR001250 Mannose-6-phosphate isomerase, type I GO:0004476|GO:0005975|GO:0008270 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 GYO_1505 1dc0584ab79ab7879d8238f8316321fc 315 Gene3D G3DSA:2.60.120.10 228 315 1.1E-25 T 14-10-2018 IPR014710 RmlC-like jelly roll fold GYO_1505 1dc0584ab79ab7879d8238f8316321fc 315 TIGRFAM TIGR00218 manA: mannose-6-phosphate isomerase, class I 6 105 1.5E-34 T 14-10-2018 IPR001250 Mannose-6-phosphate isomerase, type I GO:0004476|GO:0005975|GO:0008270 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 GYO_1505 1dc0584ab79ab7879d8238f8316321fc 315 TIGRFAM TIGR00218 manA: mannose-6-phosphate isomerase, class I 100 314 8.2E-63 T 14-10-2018 IPR001250 Mannose-6-phosphate isomerase, type I GO:0004476|GO:0005975|GO:0008270 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 GYO_1505 1dc0584ab79ab7879d8238f8316321fc 315 SUPERFAMILY SSF51182 4 314 8.11E-103 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily GYO_1505 1dc0584ab79ab7879d8238f8316321fc 315 PIRSF PIRSF036894 3 315 2.1E-133 T 14-10-2018 IPR014628 Mannose-6-phosphate isomerase, Firmicutes type, short form GO:0004476|GO:0005975 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882 GYO_1233 beca3feae43aefd177ea0f3b911a867d 289 Gene3D G3DSA:3.40.50.720 1 287 9.8E-93 T 14-10-2018 GYO_1233 beca3feae43aefd177ea0f3b911a867d 289 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 215 232 1.5E-38 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR GYO_1233 beca3feae43aefd177ea0f3b911a867d 289 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 194 213 1.5E-38 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR GYO_1233 beca3feae43aefd177ea0f3b911a867d 289 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 47 64 1.5E-38 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR GYO_1233 beca3feae43aefd177ea0f3b911a867d 289 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 122 133 1.5E-38 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR GYO_1233 beca3feae43aefd177ea0f3b911a867d 289 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 168 184 1.5E-38 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR GYO_1233 beca3feae43aefd177ea0f3b911a867d 289 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 249 269 1.5E-38 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR GYO_1233 beca3feae43aefd177ea0f3b911a867d 289 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 181 209 - T 14-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 GYO_1233 beca3feae43aefd177ea0f3b911a867d 289 SUPERFAMILY SSF51735 44 286 4.78E-87 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily GYO_1233 beca3feae43aefd177ea0f3b911a867d 289 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 55 284 1.0E-64 T 14-10-2018 GYO_1233 beca3feae43aefd177ea0f3b911a867d 289 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 174 182 3.0E-10 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR GYO_1233 beca3feae43aefd177ea0f3b911a867d 289 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 122 133 3.0E-10 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR GYO_1233 beca3feae43aefd177ea0f3b911a867d 289 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 194 213 3.0E-10 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR GYO_3027 717ec278d52adfc3cb4ca1c4f318ed71 531 SUPERFAMILY SSF46977 411 505 2.88E-21 T 14-10-2018 IPR037099 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain superfamily GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 GYO_3027 717ec278d52adfc3cb4ca1c4f318ed71 531 Gene3D G3DSA:3.50.50.60 7 382 7.4E-130 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily GYO_3027 717ec278d52adfc3cb4ca1c4f318ed71 531 Gene3D G3DSA:3.90.700.10 230 336 7.4E-130 T 14-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 GYO_3027 717ec278d52adfc3cb4ca1c4f318ed71 531 SUPERFAMILY SSF51905 6 386 6.64E-54 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily GYO_3027 717ec278d52adfc3cb4ca1c4f318ed71 531 Pfam PF02910 Fumarate reductase flavoprotein C-term 413 504 3.1E-12 T 14-10-2018 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 GYO_3027 717ec278d52adfc3cb4ca1c4f318ed71 531 SUPERFAMILY SSF56425 220 330 1.94E-32 T 14-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 GYO_3027 717ec278d52adfc3cb4ca1c4f318ed71 531 Pfam PF00890 FAD binding domain 6 370 1.2E-82 T 14-10-2018 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 GYO_3027 717ec278d52adfc3cb4ca1c4f318ed71 531 Gene3D G3DSA:1.20.58.100 396 503 1.0E-16 T 14-10-2018 GYO_3027 717ec278d52adfc3cb4ca1c4f318ed71 531 TIGRFAM TIGR00551 nadB: L-aspartate oxidase 3 488 3.3E-216 T 14-10-2018 IPR005288 L-aspartate oxidase GO:0005737|GO:0008734|GO:0009435|GO:0055114 KEGG: 00250+1.4.3.16|KEGG: 00760+1.4.3.16|MetaCyc: PWY-5316|MetaCyc: PWY-7342 GYO_0555 2bd2e72e9481b32b9af708470d9eb83b 132 Pfam PF11033 Competence protein J (ComJ) 9 129 6.8E-53 T 14-10-2018 IPR020354 Competence, DNA-entry nuclease inhibitor, ComJ GYO_0555 2bd2e72e9481b32b9af708470d9eb83b 132 Gene3D G3DSA:2.60.34.30 1 132 9.2E-61 T 14-10-2018 IPR038691 DNA-entry nuclease inhibitor, ComJ superfamily GYO_0555 2bd2e72e9481b32b9af708470d9eb83b 132 ProDom PD081734 COMPETENCE J NIN DNA-ENTRY MEMBRANE INHIBITOR NUCLEASE 10 128 3.0E-64 T 14-10-2018 IPR020354 Competence, DNA-entry nuclease inhibitor, ComJ GYO_1780 cc5cfdb5d0fa2def8d80533691060ff8 303 TIGRFAM TIGR00745 apbA_panE: 2-dehydropantoate 2-reductase 3 302 8.4E-78 T 14-10-2018 IPR003710 Ketopantoate reductase ApbA/PanE GO:0005737|GO:0008677|GO:0015940 KEGG: 00770+1.1.1.169|MetaCyc: PWY-6654 GYO_1780 cc5cfdb5d0fa2def8d80533691060ff8 303 Pfam PF02558 Ketopantoate reductase PanE/ApbA 4 150 1.5E-38 T 14-10-2018 IPR013332 Ketopantoate reductase, N-terminal domain GYO_1780 cc5cfdb5d0fa2def8d80533691060ff8 303 Gene3D G3DSA:1.10.1040.10 176 301 9.2E-31 T 14-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 GYO_1780 cc5cfdb5d0fa2def8d80533691060ff8 303 Gene3D G3DSA:3.40.50.720 1 172 5.3E-49 T 14-10-2018 GYO_1780 cc5cfdb5d0fa2def8d80533691060ff8 303 SUPERFAMILY SSF51735 1 178 1.44E-14 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily GYO_1780 cc5cfdb5d0fa2def8d80533691060ff8 303 Pfam PF08546 Ketopantoate reductase PanE/ApbA C terminal 177 299 1.3E-24 T 14-10-2018 IPR013752 Ketopantoate reductase, C-terminal domain GYO_1780 cc5cfdb5d0fa2def8d80533691060ff8 303 SUPERFAMILY SSF48179 177 300 1.7E-28 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 GYO_3142 5cece076fa14c13fd4ec4297009d54a0 241 Pfam PF00072 Response regulator receiver domain 4 113 7.6E-24 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 GYO_3142 5cece076fa14c13fd4ec4297009d54a0 241 SUPERFAMILY SSF52172 1 125 7.26E-30 T 14-10-2018 IPR011006 CheY-like superfamily GYO_3142 5cece076fa14c13fd4ec4297009d54a0 241 Gene3D G3DSA:2.20.25.10 204 241 2.0E-11 T 14-10-2018 GYO_3142 5cece076fa14c13fd4ec4297009d54a0 241 Gene3D G3DSA:2.40.50.40 133 203 3.1E-14 T 14-10-2018 GYO_3142 5cece076fa14c13fd4ec4297009d54a0 241 SMART SM00448 2 113 4.4E-27 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 GYO_3142 5cece076fa14c13fd4ec4297009d54a0 241 Pfam PF04397 LytTr DNA-binding domain 144 239 6.3E-32 T 14-10-2018 IPR007492 LytTR DNA-binding domain GO:0003677 GYO_3142 5cece076fa14c13fd4ec4297009d54a0 241 Gene3D G3DSA:3.40.50.2300 1 131 1.2E-30 T 14-10-2018 GYO_3142 5cece076fa14c13fd4ec4297009d54a0 241 SMART SM00850 143 240 3.3E-38 T 14-10-2018 IPR007492 LytTR DNA-binding domain GO:0003677 GYO_4124 574e2b40a4d91686a726c817369960c3 451 Gene3D G3DSA:2.130.10.10 151 398 1.3E-37 T 14-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 GYO_4124 574e2b40a4d91686a726c817369960c3 451 SUPERFAMILY SSF50974 162 450 1.41E-35 T 14-10-2018 IPR011045 Nitrous oxide reductase, N-terminal Reactome: R-HSA-114608 GYO_2413 9f0de2d964e649739d5adc09b9a5cb04 160 ProSitePatterns PS00460 Glutathione peroxidases active site. 23 38 - T 14-10-2018 IPR029759 Glutathione peroxidase active site Reactome: R-HSA-3299685 GYO_2413 9f0de2d964e649739d5adc09b9a5cb04 160 SUPERFAMILY SSF52833 1 158 2.06E-61 T 14-10-2018 IPR036249 Thioredoxin-like superfamily GYO_2413 9f0de2d964e649739d5adc09b9a5cb04 160 Gene3D G3DSA:3.40.30.10 1 160 2.1E-70 T 14-10-2018 GYO_2413 9f0de2d964e649739d5adc09b9a5cb04 160 Pfam PF00255 Glutathione peroxidase 3 109 6.6E-42 T 14-10-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 GYO_2413 9f0de2d964e649739d5adc09b9a5cb04 160 PIRSF PIRSF000303 1 160 2.8E-68 T 14-10-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 GYO_2413 9f0de2d964e649739d5adc09b9a5cb04 160 ProSitePatterns PS00763 Glutathione peroxidases signature 2. 59 66 - T 14-10-2018 IPR029760 Glutathione peroxidase conserved site Reactome: R-HSA-3299685 GYO_2413 9f0de2d964e649739d5adc09b9a5cb04 160 PRINTS PR01011 Glutathione peroxidase family signature 122 131 7.3E-20 T 14-10-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 GYO_2413 9f0de2d964e649739d5adc09b9a5cb04 160 PRINTS PR01011 Glutathione peroxidase family signature 21 38 7.3E-20 T 14-10-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 GYO_2413 9f0de2d964e649739d5adc09b9a5cb04 160 PRINTS PR01011 Glutathione peroxidase family signature 56 72 7.3E-20 T 14-10-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 GYO_2107 34cdb5d7e5f28bfe28bc52e06a2b96aa 292 SUPERFAMILY SSF160631 30 175 1.27E-27 T 14-10-2018 GYO_2107 34cdb5d7e5f28bfe28bc52e06a2b96aa 292 Gene3D G3DSA:3.40.1580.10 20 175 1.8E-29 T 14-10-2018 IPR037883 Knr4/Smi1-like domain superfamily GYO_2107 34cdb5d7e5f28bfe28bc52e06a2b96aa 292 Pfam PF14568 SMI1-KNR4 cell-wall 35 158 2.0E-27 T 14-10-2018 GYO_2107 34cdb5d7e5f28bfe28bc52e06a2b96aa 292 SMART SM00860 32 160 1.2E-8 T 14-10-2018 IPR018958 Knr4/Smi1-like domain GYO_2419 25dc7097a316fb8d78e8d16e2681348e 89 ProDom PD062992 CYTOSOLIC YPZA BH2151 15 70 6.0E-24 T 14-10-2018 IPR020314 Uncharacterised protein family YpzA GYO_2419 25dc7097a316fb8d78e8d16e2681348e 89 Pfam PF10819 Protein of unknown function (DUF2564) 12 89 9.2E-29 T 14-10-2018 IPR020314 Uncharacterised protein family YpzA GYO_2686 cabdb91bd0be24b80271bf7fc679fed5 633 SUPERFAMILY SSF52922 489 621 2.62E-33 T 14-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 GYO_2686 cabdb91bd0be24b80271bf7fc679fed5 633 Pfam PF02780 Transketolase, C-terminal domain 493 615 2.1E-33 T 14-10-2018 IPR033248 Transketolase, C-terminal domain GYO_2686 cabdb91bd0be24b80271bf7fc679fed5 633 SUPERFAMILY SSF52518 6 378 7.86E-70 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold GYO_2686 cabdb91bd0be24b80271bf7fc679fed5 633 TIGRFAM TIGR00204 dxs: 1-deoxy-D-xylulose-5-phosphate synthase 4 623 0.0 T 14-10-2018 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 GYO_2686 cabdb91bd0be24b80271bf7fc679fed5 633 ProSitePatterns PS00802 Transketolase signature 2. 422 438 - T 14-10-2018 IPR020826 Transketolase binding site KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 GYO_2686 cabdb91bd0be24b80271bf7fc679fed5 633 Gene3D G3DSA:3.40.50.920 493 625 2.1E-38 T 14-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 GYO_2686 cabdb91bd0be24b80271bf7fc679fed5 633 Hamap MF_00315 1-deoxy-D-xylulose-5-phosphate synthase [dxs]. 2 624 44.484 T 14-10-2018 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 GYO_2686 cabdb91bd0be24b80271bf7fc679fed5 633 ProSitePatterns PS00801 Transketolase signature 1. 28 47 - T 14-10-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 GYO_2686 cabdb91bd0be24b80271bf7fc679fed5 633 Pfam PF13292 1-deoxy-D-xylulose-5-phosphate synthase 5 278 8.3E-116 T 14-10-2018 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 GYO_2686 cabdb91bd0be24b80271bf7fc679fed5 633 Gene3D G3DSA:3.40.50.970 313 489 1.7E-63 T 14-10-2018 GYO_2686 cabdb91bd0be24b80271bf7fc679fed5 633 SMART SM00861 316 481 1.4E-59 T 14-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain GYO_2686 cabdb91bd0be24b80271bf7fc679fed5 633 SUPERFAMILY SSF52518 315 503 6.18E-53 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold GYO_2686 cabdb91bd0be24b80271bf7fc679fed5 633 Pfam PF02779 Transketolase, pyrimidine binding domain 316 477 2.7E-37 T 14-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain GYO_2175 2829959c2f08e86ce41d84c2763baddb 95 Pfam PF01521 Iron-sulphur cluster biosynthesis 1 77 1.4E-6 T 14-10-2018 IPR000361 FeS cluster biogenesis Reactome: R-HSA-1362409 GYO_2175 2829959c2f08e86ce41d84c2763baddb 95 SUPERFAMILY SSF89360 1 87 7.85E-13 T 14-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 GYO_2175 2829959c2f08e86ce41d84c2763baddb 95 PIRSF PIRSF034852 1 95 1.8E-40 T 14-10-2018 IPR008326 Uncharacterised conserved protein UCP034852 GYO_1908 d2a38aec57b2dae02d2bca2ab2c38f0e 382 SUPERFAMILY SSF88697 4 155 9.94E-47 T 14-10-2018 IPR015947 PUA-like superfamily GYO_1908 d2a38aec57b2dae02d2bca2ab2c38f0e 382 SUPERFAMILY SSF52374 159 371 1.31E-84 T 14-10-2018 GYO_1908 d2a38aec57b2dae02d2bca2ab2c38f0e 382 Gene3D G3DSA:3.40.50.620 161 373 1.9E-94 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold GYO_1908 d2a38aec57b2dae02d2bca2ab2c38f0e 382 Pfam PF14306 PUA-like domain 4 153 5.4E-48 T 14-10-2018 IPR025980 ATP-sulfurylase PUA-like domain KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932|Reactome: R-HSA-174362|Reactome: R-HSA-2408550 GYO_1908 d2a38aec57b2dae02d2bca2ab2c38f0e 382 Pfam PF01747 ATP-sulfurylase 161 371 1.1E-92 T 14-10-2018 IPR024951 Sulphate adenylyltransferase catalytic domain GO:0004781 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932|Reactome: R-HSA-174362|Reactome: R-HSA-2408550 GYO_1908 d2a38aec57b2dae02d2bca2ab2c38f0e 382 Gene3D G3DSA:3.10.400.10 3 152 2.4E-44 T 14-10-2018 GYO_1908 d2a38aec57b2dae02d2bca2ab2c38f0e 382 TIGRFAM TIGR00339 sopT: sulfate adenylyltransferase 5 371 6.4E-149 T 14-10-2018 IPR002650 Sulphate adenylyltransferase GO:0000103|GO:0004781 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932|Reactome: R-HSA-174362|Reactome: R-HSA-2408550 GYO_1908 d2a38aec57b2dae02d2bca2ab2c38f0e 382 Hamap MF_00066 Sulfate adenylyltransferase [sat]. 20 375 52.362 T 14-10-2018 IPR020792 Sulphate adenylyltransferase, prokaryotic-type GO:0000103|GO:0004781 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932 GYO_4383 8e6f55a54b8cdfd8fcad1c57319d47e7 487 Hamap MF_01670 Malonate-semialdehyde dehydrogenase [iolA]. 1 481 74.046 T 14-10-2018 IPR023510 Methylmalonate-semialdehyde dehydrogenase, Gram-positive bacteria GO:0004491|GO:0055114 KEGG: 00280+1.2.1.27|KEGG: 00640+1.2.1.27|MetaCyc: PWY-5642 GYO_4383 8e6f55a54b8cdfd8fcad1c57319d47e7 487 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 277 288 - T 14-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 GYO_4383 8e6f55a54b8cdfd8fcad1c57319d47e7 487 Gene3D G3DSA:3.40.309.10 252 450 2.8E-166 T 14-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 GYO_4383 8e6f55a54b8cdfd8fcad1c57319d47e7 487 Pfam PF00171 Aldehyde dehydrogenase family 15 477 1.3E-157 T 14-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 GYO_4383 8e6f55a54b8cdfd8fcad1c57319d47e7 487 TIGRFAM TIGR01722 MMSDH: methylmalonate-semialdehyde dehydrogenase (acylating) 8 481 1.6E-180 T 14-10-2018 IPR010061 Methylmalonate-semialdehyde dehydrogenase GO:0004491|GO:0055114 KEGG: 00280+1.2.1.27|KEGG: 00640+1.2.1.27|MetaCyc: PWY-5642|Reactome: R-HSA-70895 GYO_4383 8e6f55a54b8cdfd8fcad1c57319d47e7 487 SUPERFAMILY SSF53720 5 480 7.85E-152 T 14-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 GYO_4383 8e6f55a54b8cdfd8fcad1c57319d47e7 487 Gene3D G3DSA:3.40.605.10 22 458 2.8E-166 T 14-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 GYO_0008 5cac4bdaa85d88b143b9844e94d065ba 821 Hamap MF_01897 DNA gyrase subunit A [gyrA]. 3 808 25.127 T 14-10-2018 IPR005743 DNA gyrase, subunit A GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 GYO_0008 5cac4bdaa85d88b143b9844e94d065ba 821 Gene3D G3DSA:3.90.199.10 33 486 2.0E-221 T 14-10-2018 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 Reactome: R-HSA-4615885 GYO_0008 5cac4bdaa85d88b143b9844e94d065ba 821 Gene3D G3DSA:1.10.268.10 370 459 2.0E-221 T 14-10-2018 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain superfamily GO:0003677|GO:0003918|GO:0005524 Reactome: R-HSA-4615885 GYO_0008 5cac4bdaa85d88b143b9844e94d065ba 821 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 662 705 1.6E-13 T 14-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 GYO_0008 5cac4bdaa85d88b143b9844e94d065ba 821 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 760 806 1.7E-10 T 14-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 GYO_0008 5cac4bdaa85d88b143b9844e94d065ba 821 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 555 602 3.1E-10 T 14-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 GYO_0008 5cac4bdaa85d88b143b9844e94d065ba 821 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 506 551 1.0E-14 T 14-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 GYO_0008 5cac4bdaa85d88b143b9844e94d065ba 821 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 710 756 2.9E-14 T 14-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 GYO_0008 5cac4bdaa85d88b143b9844e94d065ba 821 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 612 655 7.1E-8 T 14-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 GYO_0008 5cac4bdaa85d88b143b9844e94d065ba 821 TIGRFAM TIGR01063 gyrA: DNA gyrase, A subunit 10 807 0.0 T 14-10-2018 GYO_0008 5cac4bdaa85d88b143b9844e94d065ba 821 SUPERFAMILY SSF101904 500 818 3.53E-114 T 14-10-2018 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal GYO_0008 5cac4bdaa85d88b143b9844e94d065ba 821 SMART SM00434 12 465 2.3E-295 T 14-10-2018 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 GYO_0008 5cac4bdaa85d88b143b9844e94d065ba 821 Gene3D G3DSA:2.120.10.90 498 808 4.6E-126 T 14-10-2018 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal GYO_0008 5cac4bdaa85d88b143b9844e94d065ba 821 SUPERFAMILY SSF56719 31 488 5.49E-183 T 14-10-2018 IPR013760 DNA topoisomerase, type IIA-like domain superfamily GO:0003918|GO:0005524 Reactome: R-HSA-4615885 GYO_0008 5cac4bdaa85d88b143b9844e94d065ba 821 Pfam PF00521 DNA gyrase/topoisomerase IV, subunit A 33 472 1.1E-162 T 14-10-2018 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 GYO_0008 5cac4bdaa85d88b143b9844e94d065ba 821 Gene3D G3DSA:3.30.1360.40 237 333 2.0E-221 T 14-10-2018 GYO_2649 0a7ece690fc9be518ad96c9c9c1e5f49 327 Pfam PF02780 Transketolase, C-terminal domain 194 317 1.3E-42 T 14-10-2018 IPR033248 Transketolase, C-terminal domain GYO_2649 0a7ece690fc9be518ad96c9c9c1e5f49 327 SMART SM00861 4 179 1.7E-71 T 14-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain GYO_2649 0a7ece690fc9be518ad96c9c9c1e5f49 327 SUPERFAMILY SSF52922 188 325 2.49E-41 T 14-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 GYO_2649 0a7ece690fc9be518ad96c9c9c1e5f49 327 Pfam PF02779 Transketolase, pyrimidine binding domain 4 178 5.1E-52 T 14-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain GYO_2649 0a7ece690fc9be518ad96c9c9c1e5f49 327 Gene3D G3DSA:3.40.50.970 1 192 1.1E-93 T 14-10-2018 GYO_2649 0a7ece690fc9be518ad96c9c9c1e5f49 327 SUPERFAMILY SSF52518 1 204 1.02E-73 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold GYO_2649 0a7ece690fc9be518ad96c9c9c1e5f49 327 Gene3D G3DSA:3.40.50.920 193 327 8.7E-44 T 14-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 GYO_2183 ea1b5b42edc15fdddc65104195776b04 499 Gene3D G3DSA:2.60.40.710 351 499 5.7E-60 T 14-10-2018 IPR036966 Carbohydrate-binding module 3 superfamily GO:0005975|GO:0030248 GYO_2183 ea1b5b42edc15fdddc65104195776b04 499 Pfam PF00150 Cellulase (glycosyl hydrolase family 5) 50 296 7.9E-61 T 14-10-2018 IPR001547 Glycoside hydrolase, family 5 GO:0004553|GO:0005975 GYO_2183 ea1b5b42edc15fdddc65104195776b04 499 Pfam PF00942 Cellulose binding domain 356 436 1.8E-24 T 14-10-2018 IPR001956 Carbohydrate-binding module 3 GO:0005975|GO:0030248 GYO_2183 ea1b5b42edc15fdddc65104195776b04 499 ProSitePatterns PS00659 Glycosyl hydrolases family 5 signature. 162 171 - T 14-10-2018 IPR018087 Glycoside hydrolase, family 5, conserved site GO:0004553|GO:0005975 GYO_2183 ea1b5b42edc15fdddc65104195776b04 499 Gene3D G3DSA:3.20.20.80 31 331 3.4E-102 T 14-10-2018 GYO_2183 ea1b5b42edc15fdddc65104195776b04 499 SUPERFAMILY SSF49384 351 498 3.24E-49 T 14-10-2018 IPR008965 CBM2/CBM3, carbohydrate-binding domain superfamily GO:0030246 GYO_2183 ea1b5b42edc15fdddc65104195776b04 499 SMART SM01067 356 437 2.2E-33 T 14-10-2018 IPR001956 Carbohydrate-binding module 3 GO:0005975|GO:0030248 GYO_2183 ea1b5b42edc15fdddc65104195776b04 499 SUPERFAMILY SSF51445 30 335 1.21E-94 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily GYO_0447 85127fa8f34da26978757a018ccb7c32 455 Pfam PF07690 Major Facilitator Superfamily 323 443 2.6E-9 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 GYO_0447 85127fa8f34da26978757a018ccb7c32 455 Pfam PF07690 Major Facilitator Superfamily 25 318 2.3E-50 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 GYO_0447 85127fa8f34da26978757a018ccb7c32 455 Gene3D G3DSA:1.20.1250.20 12 214 1.9E-47 T 14-10-2018 GYO_0447 85127fa8f34da26978757a018ccb7c32 455 SUPERFAMILY SSF103473 10 444 1.44E-86 T 14-10-2018 IPR036259 MFS transporter superfamily GYO_0447 85127fa8f34da26978757a018ccb7c32 455 TIGRFAM TIGR00893 2A0114: D-galactonate transporter 27 434 5.6E-160 T 14-10-2018 GYO_0447 85127fa8f34da26978757a018ccb7c32 455 PIRSF PIRSF002808 2 449 3.6E-48 T 14-10-2018 IPR000849 Sugar phosphate transporter GO:0016021|GO:0022857|GO:0055085 GYO_0447 85127fa8f34da26978757a018ccb7c32 455 Gene3D G3DSA:1.20.1250.20 241 441 6.7E-34 T 14-10-2018 GYO_2693 b5390ee95d8d9e71961b3e4d0fb66013 135 Pfam PF03780 Asp23 family, cell envelope-related function 16 121 8.1E-36 T 14-10-2018 IPR005531 Alkaline shock protein Asp23 GYO_0843 efaf0a5cc2cdd5085f7334b4347ed358 237 SMART SM00866 90 229 3.2E-37 T 14-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 GYO_0843 efaf0a5cc2cdd5085f7334b4347ed358 237 Pfam PF00392 Bacterial regulatory proteins, gntR family 4 66 2.2E-15 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 GYO_0843 efaf0a5cc2cdd5085f7334b4347ed358 237 Gene3D G3DSA:1.10.10.10 1 70 4.1E-19 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily GYO_0843 efaf0a5cc2cdd5085f7334b4347ed358 237 Pfam PF07702 UTRA domain 93 228 2.1E-33 T 14-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 GYO_0843 efaf0a5cc2cdd5085f7334b4347ed358 237 SUPERFAMILY SSF46785 1 71 4.97E-17 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily GYO_0843 efaf0a5cc2cdd5085f7334b4347ed358 237 Gene3D G3DSA:3.40.1410.10 78 233 8.7E-40 T 14-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily GYO_0843 efaf0a5cc2cdd5085f7334b4347ed358 237 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 40 56 3.2E-7 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 GYO_0843 efaf0a5cc2cdd5085f7334b4347ed358 237 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 26 40 3.2E-7 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 GYO_0843 efaf0a5cc2cdd5085f7334b4347ed358 237 SUPERFAMILY SSF64288 82 231 5.81E-44 T 14-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily GYO_0843 efaf0a5cc2cdd5085f7334b4347ed358 237 SMART SM00345 7 66 2.4E-11 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 GYO_1439 2076df9cf05e6c094fed9f90cf68cf06 261 Pfam PF10026 Predicted Zn-dependent protease (DUF2268) 67 257 3.0E-65 T 14-10-2018 IPR018728 Domain of unknown function DUF2268 GYO_2102 6dd978e5093fcb52c5b664b2bc7d3c3f 322 Gene3D G3DSA:3.40.50.300 26 226 6.2E-58 T 14-10-2018 GYO_2102 6dd978e5093fcb52c5b664b2bc7d3c3f 322 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 95 226 1.6E-19 T 14-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 GYO_2102 6dd978e5093fcb52c5b664b2bc7d3c3f 322 SMART SM00382 91 229 7.3E-9 T 14-10-2018 IPR003593 AAA+ ATPase domain GYO_2102 6dd978e5093fcb52c5b664b2bc7d3c3f 322 SUPERFAMILY SSF52540 41 312 4.87E-37 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase GYO_2102 6dd978e5093fcb52c5b664b2bc7d3c3f 322 Gene3D G3DSA:1.10.8.60 227 317 2.7E-19 T 14-10-2018 GYO_2102 6dd978e5093fcb52c5b664b2bc7d3c3f 322 PRINTS PR00819 CbxX/CfqX superfamily signature 214 233 1.7E-62 T 14-10-2018 IPR000641 CbxX/CfqX GO:0005524 GYO_2102 6dd978e5093fcb52c5b664b2bc7d3c3f 322 PRINTS PR00819 CbxX/CfqX superfamily signature 94 109 1.7E-62 T 14-10-2018 IPR000641 CbxX/CfqX GO:0005524 GYO_2102 6dd978e5093fcb52c5b664b2bc7d3c3f 322 PRINTS PR00819 CbxX/CfqX superfamily signature 54 68 1.7E-62 T 14-10-2018 IPR000641 CbxX/CfqX GO:0005524 GYO_2102 6dd978e5093fcb52c5b664b2bc7d3c3f 322 PRINTS PR00819 CbxX/CfqX superfamily signature 274 286 1.7E-62 T 14-10-2018 IPR000641 CbxX/CfqX GO:0005524 GYO_2102 6dd978e5093fcb52c5b664b2bc7d3c3f 322 PRINTS PR00819 CbxX/CfqX superfamily signature 176 188 1.7E-62 T 14-10-2018 IPR000641 CbxX/CfqX GO:0005524 GYO_2102 6dd978e5093fcb52c5b664b2bc7d3c3f 322 PRINTS PR00819 CbxX/CfqX superfamily signature 132 146 1.7E-62 T 14-10-2018 IPR000641 CbxX/CfqX GO:0005524 GYO_2102 6dd978e5093fcb52c5b664b2bc7d3c3f 322 PRINTS PR00819 CbxX/CfqX superfamily signature 146 165 1.7E-62 T 14-10-2018 IPR000641 CbxX/CfqX GO:0005524 GYO_2102 6dd978e5093fcb52c5b664b2bc7d3c3f 322 PRINTS PR00819 CbxX/CfqX superfamily signature 197 214 1.7E-62 T 14-10-2018 IPR000641 CbxX/CfqX GO:0005524 GYO_2102 6dd978e5093fcb52c5b664b2bc7d3c3f 322 TIGRFAM TIGR02881 spore_V_K: stage V sporulation protein K 51 312 2.9E-141 T 14-10-2018 IPR014232 Sporulation stage V, protein K GYO_4373 cb8a343acf138147542295c077201a15 229 Gene3D G3DSA:1.10.10.10 127 228 1.4E-23 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily GYO_4373 cb8a343acf138147542295c077201a15 229 Pfam PF00072 Response regulator receiver domain 4 112 8.6E-25 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 GYO_4373 cb8a343acf138147542295c077201a15 229 Pfam PF00486 Transcriptional regulatory protein, C terminal 151 225 4.9E-22 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 GYO_4373 cb8a343acf138147542295c077201a15 229 Gene3D G3DSA:3.40.50.2300 2 126 4.0E-32 T 14-10-2018 GYO_4373 cb8a343acf138147542295c077201a15 229 SMART SM00862 150 225 6.4E-19 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 GYO_4373 cb8a343acf138147542295c077201a15 229 SUPERFAMILY SSF52172 3 177 2.42E-35 T 14-10-2018 IPR011006 CheY-like superfamily GYO_4373 cb8a343acf138147542295c077201a15 229 SMART SM00448 2 112 5.6E-36 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 GYO_0845 7c481a699ede8beb9c1b70580604a864 315 SUPERFAMILY SSF51182 2 314 1.37E-103 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily GYO_0845 7c481a699ede8beb9c1b70580604a864 315 Gene3D G3DSA:2.60.120.10 1 226 1.6E-92 T 14-10-2018 IPR014710 RmlC-like jelly roll fold GYO_0845 7c481a699ede8beb9c1b70580604a864 315 PIRSF PIRSF036894 2 315 2.0E-131 T 14-10-2018 IPR014628 Mannose-6-phosphate isomerase, Firmicutes type, short form GO:0004476|GO:0005975 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882 GYO_0845 7c481a699ede8beb9c1b70580604a864 315 Pfam PF01238 Phosphomannose isomerase type I 5 314 5.0E-45 T 14-10-2018 IPR001250 Mannose-6-phosphate isomerase, type I GO:0004476|GO:0005975|GO:0008270 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 GYO_0845 7c481a699ede8beb9c1b70580604a864 315 Gene3D G3DSA:2.60.120.10 229 314 1.7E-23 T 14-10-2018 IPR014710 RmlC-like jelly roll fold GYO_0845 7c481a699ede8beb9c1b70580604a864 315 TIGRFAM TIGR00218 manA: mannose-6-phosphate isomerase, class I 101 314 6.8E-63 T 14-10-2018 IPR001250 Mannose-6-phosphate isomerase, type I GO:0004476|GO:0005975|GO:0008270 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 GYO_0845 7c481a699ede8beb9c1b70580604a864 315 TIGRFAM TIGR00218 manA: mannose-6-phosphate isomerase, class I 5 102 1.2E-35 T 14-10-2018 IPR001250 Mannose-6-phosphate isomerase, type I GO:0004476|GO:0005975|GO:0008270 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 GYO_2164 9af55489be199d87c7960342fa07babc 142 ProDom PD086666 YNEK BH2332 11 141 1.0E-59 T 14-10-2018 IPR020203 Uncharacterised protein family, YneK GYO_2164 9af55489be199d87c7960342fa07babc 142 Pfam PF11084 Protein of unknown function (DUF2621) 3 141 2.3E-72 T 14-10-2018 IPR020203 Uncharacterised protein family, YneK GYO_0416 fd201b7d967d59fc755b93537a7dc4e0 40 Pfam PF04688 SPP1 phage holin 2 31 5.3E-12 T 14-10-2018 IPR006479 Holin GYO_0416 fd201b7d967d59fc755b93537a7dc4e0 40 ProDom PD008023 HOLIN TRANSMEMBRANE MEMBRANE PROPHAGE FAMILY BHLB SPP1 5'REGION HOLIN ORF050 3 36 7.0E-7 T 14-10-2018 IPR006479 Holin GYO_3447 4bf53972689f332009ef8310943623eb 448 PIRSF PIRSF005348 11 447 1.6E-180 T 14-10-2018 IPR004679 2-hydroxycarboxylate transporter GO:0008514|GO:0015711|GO:0016021 GYO_3447 4bf53972689f332009ef8310943623eb 448 Pfam PF03390 2-hydroxycarboxylate transporter family 31 440 7.4E-162 T 14-10-2018 IPR004679 2-hydroxycarboxylate transporter GO:0008514|GO:0015711|GO:0016021 GYO_3447 4bf53972689f332009ef8310943623eb 448 TIGRFAM TIGR00783 ccs: citrate carrier protein, CCS family 25 442 9.7E-184 T 14-10-2018 IPR018025 2-hydroxycarboxylate transporter, Proteobacteria/Firmicutes GYO_2621 45a787a99db720e532d9d4de6a9cf47c 259 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 139 167 - T 14-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 GYO_2621 45a787a99db720e532d9d4de6a9cf47c 259 PIRSF PIRSF000126 3 258 4.2E-53 T 14-10-2018 GYO_2621 45a787a99db720e532d9d4de6a9cf47c 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 126 142 1.8E-26 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR GYO_2621 45a787a99db720e532d9d4de6a9cf47c 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 79 90 1.8E-26 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR GYO_2621 45a787a99db720e532d9d4de6a9cf47c 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 173 190 1.8E-26 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR GYO_2621 45a787a99db720e532d9d4de6a9cf47c 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 152 171 1.8E-26 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR GYO_2621 45a787a99db720e532d9d4de6a9cf47c 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 1.8E-26 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR GYO_2621 45a787a99db720e532d9d4de6a9cf47c 259 Gene3D G3DSA:3.40.50.720 1 258 3.5E-67 T 14-10-2018 GYO_2621 45a787a99db720e532d9d4de6a9cf47c 259 Pfam PF00106 short chain dehydrogenase 7 190 6.2E-53 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR GYO_2621 45a787a99db720e532d9d4de6a9cf47c 259 SUPERFAMILY SSF51735 3 253 2.79E-69 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily GYO_2621 45a787a99db720e532d9d4de6a9cf47c 259 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 152 171 4.0E-12 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR GYO_2621 45a787a99db720e532d9d4de6a9cf47c 259 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 79 90 4.0E-12 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR GYO_2621 45a787a99db720e532d9d4de6a9cf47c 259 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 132 140 4.0E-12 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR GYO_1466 2ca4e010e4b5cddf1d9f2197e849af91 266 Hamap MF_00361 NAD kinase [nadK]. 1 263 22.849 T 14-10-2018 IPR002504 NAD kinase GO:0003951|GO:0006741 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269|Reactome: R-HSA-196807 GYO_1466 2ca4e010e4b5cddf1d9f2197e849af91 266 Pfam PF01513 ATP-NAD kinase 30 184 1.4E-23 T 14-10-2018 IPR002504 NAD kinase GO:0003951|GO:0006741 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269|Reactome: R-HSA-196807 GYO_1466 2ca4e010e4b5cddf1d9f2197e849af91 266 SUPERFAMILY SSF111331 21 261 8.37E-61 T 14-10-2018 IPR016064 NAD kinase/diacylglycerol kinase-like domain superfamily GYO_1466 2ca4e010e4b5cddf1d9f2197e849af91 266 Gene3D G3DSA:2.60.200.30 102 240 5.3E-98 T 14-10-2018 IPR017437 ATP-NAD kinase, PpnK-type, C-terminal GO:0003951|GO:0019674 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269|Reactome: R-HSA-196807 GYO_1466 2ca4e010e4b5cddf1d9f2197e849af91 266 Gene3D G3DSA:3.40.50.10330 16 262 5.3E-98 T 14-10-2018 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, N-terminal GO:0003951 GYO_3885 84f44a02aaa7c963ce705d75e204688b 507 TIGRFAM TIGR02492 flgK_ends: flagellar hook-associated protein FlgK 7 500 7.4E-132 T 14-10-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 GYO_3885 84f44a02aaa7c963ce705d75e204688b 507 PRINTS PR01005 Flagellar hook-associated protein signature 167 191 5.2E-9 T 14-10-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 GYO_3885 84f44a02aaa7c963ce705d75e204688b 507 PRINTS PR01005 Flagellar hook-associated protein signature 265 287 5.2E-9 T 14-10-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 GYO_3885 84f44a02aaa7c963ce705d75e204688b 507 PRINTS PR01005 Flagellar hook-associated protein signature 14 37 5.2E-9 T 14-10-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 GYO_3885 84f44a02aaa7c963ce705d75e204688b 507 PRINTS PR01005 Flagellar hook-associated protein signature 134 154 5.2E-9 T 14-10-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 GYO_3885 84f44a02aaa7c963ce705d75e204688b 507 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 454 500 9.4E-12 T 14-10-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain GYO_3885 84f44a02aaa7c963ce705d75e204688b 507 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 14 34 - T 14-10-2018 IPR019776 Flagellar basal body rod protein, conserved site GYO_3885 84f44a02aaa7c963ce705d75e204688b 507 Pfam PF00460 Flagella basal body rod protein 8 38 9.5E-11 T 14-10-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 GYO_3885 84f44a02aaa7c963ce705d75e204688b 507 SUPERFAMILY SSF64518 154 500 2.35E-20 T 14-10-2018 GYO_3628 ce90cb252ad36f8bd017dee640641435 573 Pfam PF00512 His Kinase A (phospho-acceptor) domain 350 410 7.3E-13 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 GYO_3628 ce90cb252ad36f8bd017dee640641435 573 Gene3D G3DSA:3.30.565.10 418 573 9.3E-37 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily GYO_3628 ce90cb252ad36f8bd017dee640641435 573 SMART SM00387 463 573 2.6E-30 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase GYO_3628 ce90cb252ad36f8bd017dee640641435 573 SMART SM00388 349 417 1.3E-14 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 GYO_3628 ce90cb252ad36f8bd017dee640641435 573 Gene3D G3DSA:1.10.287.130 324 414 1.4E-13 T 14-10-2018 GYO_3628 ce90cb252ad36f8bd017dee640641435 573 SUPERFAMILY SSF55874 407 571 9.95E-37 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily GYO_3628 ce90cb252ad36f8bd017dee640641435 573 PRINTS PR00344 Bacterial sensor protein C-terminal signature 500 514 1.3E-10 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 GYO_3628 ce90cb252ad36f8bd017dee640641435 573 PRINTS PR00344 Bacterial sensor protein C-terminal signature 534 552 1.3E-10 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 GYO_3628 ce90cb252ad36f8bd017dee640641435 573 PRINTS PR00344 Bacterial sensor protein C-terminal signature 518 528 1.3E-10 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 GYO_3628 ce90cb252ad36f8bd017dee640641435 573 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 464 571 8.2E-25 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase GYO_3628 ce90cb252ad36f8bd017dee640641435 573 SUPERFAMILY SSF47384 332 416 2.75E-15 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 GYO_4265 5c3e0a9adcc048e8330e205025e1b79b 400 Pfam PF07690 Major Facilitator Superfamily 23 252 1.7E-25 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 GYO_4265 5c3e0a9adcc048e8330e205025e1b79b 400 SUPERFAMILY SSF103473 21 397 6.02E-49 T 14-10-2018 IPR036259 MFS transporter superfamily GYO_4265 5c3e0a9adcc048e8330e205025e1b79b 400 Gene3D G3DSA:1.20.1250.20 19 398 9.7E-52 T 14-10-2018 GYO_4265 5c3e0a9adcc048e8330e205025e1b79b 400 PRINTS PR01035 Tetracycline resistance protein signature 54 73 8.9E-5 T 14-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 GYO_4265 5c3e0a9adcc048e8330e205025e1b79b 400 PRINTS PR01035 Tetracycline resistance protein signature 114 135 8.9E-5 T 14-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 GYO_4265 5c3e0a9adcc048e8330e205025e1b79b 400 PRINTS PR01035 Tetracycline resistance protein signature 173 193 8.9E-5 T 14-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 GYO_0126 d042dc047e636222d073cd32a3512825 218 TIGRFAM TIGR02859 spore_sigH: RNA polymerase sigma-H factor 16 212 1.6E-110 T 14-10-2018 IPR014218 RNA polymerase sigma-H type GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 GYO_0126 d042dc047e636222d073cd32a3512825 218 Pfam PF08281 Sigma-70, region 4 164 207 1.1E-9 T 14-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 GYO_0126 d042dc047e636222d073cd32a3512825 218 PIRSF PIRSF002939 3 218 3.8E-110 T 14-10-2018 IPR016371 RNA polymerase sigma-H factor GO:0003677|GO:0006351|GO:0016987 GYO_0126 d042dc047e636222d073cd32a3512825 218 Pfam PF04542 Sigma-70 region 2 38 107 6.2E-14 T 14-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 GYO_0126 d042dc047e636222d073cd32a3512825 218 SUPERFAMILY SSF88946 20 107 5.36E-22 T 14-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 GYO_0126 d042dc047e636222d073cd32a3512825 218 SUPERFAMILY SSF88659 125 211 1.07E-11 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like GYO_0126 d042dc047e636222d073cd32a3512825 218 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 62 75 - T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 GYO_0126 d042dc047e636222d073cd32a3512825 218 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 33 211 2.1E-28 T 14-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 GYO_0126 d042dc047e636222d073cd32a3512825 218 ProSitePatterns PS00622 LuxR-type HTH domain signature. 179 206 - T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 GYO_3713 c111d8815e89c8de11db7fce42e8dc31 430 SMART SM01192 139 427 4.0E-229 T 14-10-2018 IPR020810 Enolase, C-terminal TIM barrel domain KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 GYO_3713 c111d8815e89c8de11db7fce42e8dc31 430 Pfam PF00113 Enolase, C-terminal TIM barrel domain 140 426 3.2E-145 T 14-10-2018 IPR020810 Enolase, C-terminal TIM barrel domain KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 GYO_3713 c111d8815e89c8de11db7fce42e8dc31 430 PRINTS PR00148 Enolase signature 313 324 6.7E-47 T 14-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 GYO_3713 c111d8815e89c8de11db7fce42e8dc31 430 PRINTS PR00148 Enolase signature 336 350 6.7E-47 T 14-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 GYO_3713 c111d8815e89c8de11db7fce42e8dc31 430 PRINTS PR00148 Enolase signature 161 174 6.7E-47 T 14-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 GYO_3713 c111d8815e89c8de11db7fce42e8dc31 430 PRINTS PR00148 Enolase signature 37 51 6.7E-47 T 14-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 GYO_3713 c111d8815e89c8de11db7fce42e8dc31 430 PRINTS PR00148 Enolase signature 107 123 6.7E-47 T 14-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 GYO_3713 c111d8815e89c8de11db7fce42e8dc31 430 PRINTS PR00148 Enolase signature 365 382 6.7E-47 T 14-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 GYO_3713 c111d8815e89c8de11db7fce42e8dc31 430 PIRSF PIRSF001400 1 427 5.3E-198 T 14-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 GYO_3713 c111d8815e89c8de11db7fce42e8dc31 430 Gene3D G3DSA:3.20.20.120 128 430 1.5E-139 T 14-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily GYO_3713 c111d8815e89c8de11db7fce42e8dc31 430 Gene3D G3DSA:3.30.390.10 3 127 1.1E-60 T 14-10-2018 IPR029017 Enolase-like, N-terminal GYO_3713 c111d8815e89c8de11db7fce42e8dc31 430 ProSitePatterns PS00164 Enolase signature. 336 349 - T 14-10-2018 IPR020809 Enolase, conserved site KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: R-HSA-70171|Reactome: R-HSA-70263 GYO_3713 c111d8815e89c8de11db7fce42e8dc31 430 SMART SM01193 4 134 9.1E-101 T 14-10-2018 IPR020811 Enolase, N-terminal KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 GYO_3713 c111d8815e89c8de11db7fce42e8dc31 430 SUPERFAMILY SSF54826 3 138 3.54E-61 T 14-10-2018 GYO_3713 c111d8815e89c8de11db7fce42e8dc31 430 TIGRFAM TIGR01060 eno: phosphopyruvate hydratase 4 427 6.3E-224 T 14-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 GYO_3713 c111d8815e89c8de11db7fce42e8dc31 430 Pfam PF03952 Enolase, N-terminal domain 4 134 8.2E-63 T 14-10-2018 IPR020811 Enolase, N-terminal KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 GYO_3713 c111d8815e89c8de11db7fce42e8dc31 430 Hamap MF_00318 Enolase [eno]. 2 413 45.96 T 14-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 GYO_3713 c111d8815e89c8de11db7fce42e8dc31 430 SUPERFAMILY SSF51604 139 428 1.13E-130 T 14-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily GYO_4151 2956c03e02b796a15aa27b62c7bce434 299 Pfam PF03466 LysR substrate binding domain 90 291 9.6E-49 T 14-10-2018 IPR005119 LysR, substrate-binding GYO_4151 2956c03e02b796a15aa27b62c7bce434 299 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 61 4.4E-18 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 GYO_4151 2956c03e02b796a15aa27b62c7bce434 299 Gene3D G3DSA:3.40.190.290 91 297 7.7E-47 T 14-10-2018 GYO_4151 2956c03e02b796a15aa27b62c7bce434 299 Gene3D G3DSA:1.10.10.10 3 90 2.0E-24 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily GYO_4151 2956c03e02b796a15aa27b62c7bce434 299 SUPERFAMILY SSF46785 3 111 1.44E-21 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily GYO_4151 2956c03e02b796a15aa27b62c7bce434 299 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 1.9E-7 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 GYO_4151 2956c03e02b796a15aa27b62c7bce434 299 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 1.9E-7 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 GYO_4151 2956c03e02b796a15aa27b62c7bce434 299 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 1.9E-7 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 GYO_4151 2956c03e02b796a15aa27b62c7bce434 299 SUPERFAMILY SSF53850 90 295 1.28E-41 T 14-10-2018 GYO_3670 22f03b32651ef6219a5627c7c5b6a46e 315 SUPERFAMILY SSF103481 47 152 6.93E-8 T 14-10-2018 GYO_3670 22f03b32651ef6219a5627c7c5b6a46e 315 SUPERFAMILY SSF103481 217 299 1.96E-8 T 14-10-2018 GYO_3670 22f03b32651ef6219a5627c7c5b6a46e 315 Pfam PF00892 EamA-like transporter family 163 296 4.2E-19 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 GYO_3670 22f03b32651ef6219a5627c7c5b6a46e 315 Pfam PF00892 EamA-like transporter family 9 150 2.2E-19 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 GYO_4112 9d3d4bfbfc3bdb1506a72e0ebe2da8eb 238 Pfam PF00027 Cyclic nucleotide-binding domain 29 114 1.2E-16 T 14-10-2018 IPR000595 Cyclic nucleotide-binding domain GYO_4112 9d3d4bfbfc3bdb1506a72e0ebe2da8eb 238 SMART SM00100 9 129 1.4E-19 T 14-10-2018 IPR000595 Cyclic nucleotide-binding domain GYO_4112 9d3d4bfbfc3bdb1506a72e0ebe2da8eb 238 ProSitePatterns PS00042 Crp-type HTH domain signature. 176 199 - T 14-10-2018 IPR018335 Transcription regulator HTH, Crp-type, conserved site GO:0003700|GO:0005622|GO:0006355 GYO_4112 9d3d4bfbfc3bdb1506a72e0ebe2da8eb 238 SUPERFAMILY SSF51206 16 145 1.15E-30 T 14-10-2018 IPR018490 Cyclic nucleotide-binding-like GYO_4112 9d3d4bfbfc3bdb1506a72e0ebe2da8eb 238 SUPERFAMILY SSF46785 147 233 6.55E-20 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily GYO_4112 9d3d4bfbfc3bdb1506a72e0ebe2da8eb 238 Gene3D G3DSA:1.10.10.10 146 233 1.5E-24 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily GYO_4112 9d3d4bfbfc3bdb1506a72e0ebe2da8eb 238 SMART SM00419 168 217 2.5E-12 T 14-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 GYO_4112 9d3d4bfbfc3bdb1506a72e0ebe2da8eb 238 Pfam PF13545 Crp-like helix-turn-helix domain 151 222 1.3E-14 T 14-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 GYO_4112 9d3d4bfbfc3bdb1506a72e0ebe2da8eb 238 Gene3D G3DSA:2.60.120.10 6 145 1.4E-29 T 14-10-2018 IPR014710 RmlC-like jelly roll fold GYO_1354 e81895d39b448fbb33d9222164da6cc0 175 SUPERFAMILY SSF46785 11 159 2.86E-22 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily GYO_1354 e81895d39b448fbb33d9222164da6cc0 175 ProSitePatterns PS01117 MarR-type HTH domain signature. 81 115 - T 14-10-2018 IPR023187 Transcriptional regulator MarR-type, conserved site GYO_1354 e81895d39b448fbb33d9222164da6cc0 175 Gene3D G3DSA:1.10.10.10 1 159 1.1E-25 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily GYO_1354 e81895d39b448fbb33d9222164da6cc0 175 SMART SM00347 42 145 3.8E-26 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 GYO_1354 e81895d39b448fbb33d9222164da6cc0 175 Pfam PF01047 MarR family 49 107 3.5E-17 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 GYO_1458 01623895bf1d8f218ddc3b4e678000c6 670 Gene3D G3DSA:1.20.140.70 91 246 8.9E-56 T 14-10-2018 GYO_1458 01623895bf1d8f218ddc3b4e678000c6 670 SUPERFAMILY SSF55486 122 664 6.77E-144 T 14-10-2018 GYO_1458 01623895bf1d8f218ddc3b4e678000c6 670 TIGRFAM TIGR00181 pepF: oligoendopeptidase F 74 663 1.2E-235 T 14-10-2018 IPR004438 Peptidase M3B, oligoendopeptidase F GO:0004222|GO:0006508 GYO_1458 01623895bf1d8f218ddc3b4e678000c6 670 Gene3D G3DSA:1.10.287.830 248 294 3.8E-21 T 14-10-2018 GYO_1458 01623895bf1d8f218ddc3b4e678000c6 670 Gene3D G3DSA:1.10.1370.20 295 669 9.8E-146 T 14-10-2018 GYO_1458 01623895bf1d8f218ddc3b4e678000c6 670 Pfam PF01432 Peptidase family M3 272 651 4.1E-87 T 14-10-2018 IPR001567 Peptidase M3A/M3B catalytic domain GO:0004222|GO:0006508 GYO_1458 01623895bf1d8f218ddc3b4e678000c6 670 Pfam PF08439 Oligopeptidase F 181 250 2.4E-23 T 14-10-2018 IPR013647 Oligopeptidase F, N-terminal domain GYO_1635 668a311790e078655b9f6da2c31c4950 136 Gene3D G3DSA:3.30.300.20 43 136 1.7E-34 T 14-10-2018 IPR015946 K homology domain-like, alpha/beta GYO_1635 668a311790e078655b9f6da2c31c4950 136 SUPERFAMILY SSF82784 3 135 2.22E-40 T 14-10-2018 IPR036102 OsmC/Ohr superfamily GYO_1635 668a311790e078655b9f6da2c31c4950 136 TIGRFAM TIGR03561 organ_hyd_perox: peroxiredoxin, Ohr subfamily 3 134 1.1E-52 T 14-10-2018 IPR019953 Organic hydroperoxide resistance protein famiy GO:0006979 GYO_1635 668a311790e078655b9f6da2c31c4950 136 Pfam PF02566 OsmC-like protein 39 134 1.1E-19 T 14-10-2018 IPR003718 OsmC/Ohr family GYO_1635 668a311790e078655b9f6da2c31c4950 136 Gene3D G3DSA:2.20.25.10 1 42 1.9E-25 T 14-10-2018 GYO_1542 117dfb422c339fa86425d7b976c64582 339 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 26 130 3.2E-37 T 14-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 GYO_1542 117dfb422c339fa86425d7b976c64582 339 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 59 73 - T 14-10-2018 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 GYO_1542 117dfb422c339fa86425d7b976c64582 339 Pfam PF00107 Zinc-binding dehydrogenase 172 297 1.1E-32 T 14-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 GYO_1542 117dfb422c339fa86425d7b976c64582 339 SUPERFAMILY SSF51735 136 302 1.6E-40 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily GYO_1542 117dfb422c339fa86425d7b976c64582 339 Gene3D G3DSA:3.40.50.720 147 283 2.3E-103 T 14-10-2018 GYO_1542 117dfb422c339fa86425d7b976c64582 339 SMART SM00829 8 336 8.6E-6 T 14-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 GYO_1542 117dfb422c339fa86425d7b976c64582 339 Gene3D G3DSA:3.90.180.10 15 321 2.3E-103 T 14-10-2018 GYO_1542 117dfb422c339fa86425d7b976c64582 339 SUPERFAMILY SSF50129 1 171 1.43E-52 T 14-10-2018 IPR011032 GroES-like superfamily GYO_1896 146148b8acb5bf3a71f62ac019a3d241 181 SUPERFAMILY SSF53271 5 173 4.2E-44 T 14-10-2018 IPR029057 Phosphoribosyltransferase-like GYO_1896 146148b8acb5bf3a71f62ac019a3d241 181 Pfam PF00156 Phosphoribosyl transferase domain 7 152 5.6E-21 T 14-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 GYO_1896 146148b8acb5bf3a71f62ac019a3d241 181 Gene3D G3DSA:3.40.50.2020 1 181 3.4E-63 T 14-10-2018 GYO_1896 146148b8acb5bf3a71f62ac019a3d241 181 Hamap MF_01219 Bifunctional protein PyrR [pyrR]. 4 179 39.282 T 14-10-2018 IPR023050 Bifunctional protein PyrR KEGG: 00240+2.4.2.9|MetaCyc: PWY-7183 GYO_1207 2aa1fb384af1efb4a730e040c6bb1020 198 Gene3D G3DSA:2.40.260.10 23 198 7.4E-42 T 14-10-2018 IPR023365 Sortase domain superfamily GYO_1207 2aa1fb384af1efb4a730e040c6bb1020 198 TIGRFAM TIGR01076 sortase_fam: sortase 73 198 1.0E-46 T 14-10-2018 IPR005754 Sortase family GYO_1207 2aa1fb384af1efb4a730e040c6bb1020 198 SUPERFAMILY SSF63817 62 197 8.63E-34 T 14-10-2018 IPR023365 Sortase domain superfamily GYO_1207 2aa1fb384af1efb4a730e040c6bb1020 198 Pfam PF04203 Sortase family 75 197 2.4E-26 T 14-10-2018 IPR005754 Sortase family GYO_2585 ef88a05d03d99839470beb2c88aebe2c 394 TIGRFAM TIGR01696 deoB: phosphopentomutase 8 388 3.0E-223 T 14-10-2018 IPR010045 Phosphopentomutase GO:0000287|GO:0005737|GO:0008973|GO:0009117|GO:0043094 KEGG: 00030+5.4.2.7|KEGG: 00230+5.4.2.7|MetaCyc: PWY-7180 GYO_2585 ef88a05d03d99839470beb2c88aebe2c 394 SUPERFAMILY SSF53649 5 393 3.53E-79 T 14-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 GYO_2585 ef88a05d03d99839470beb2c88aebe2c 394 SUPERFAMILY SSF143856 103 219 1.27E-51 T 14-10-2018 IPR024052 Phosphopentomutase DeoB cap domain superfamily GO:0008973 KEGG: 00030+5.4.2.7|KEGG: 00230+5.4.2.7|MetaCyc: PWY-7180 GYO_2585 ef88a05d03d99839470beb2c88aebe2c 394 Gene3D G3DSA:3.30.70.1250 101 219 1.3E-176 T 14-10-2018 IPR024052 Phosphopentomutase DeoB cap domain superfamily GO:0008973 KEGG: 00030+5.4.2.7|KEGG: 00230+5.4.2.7|MetaCyc: PWY-7180 GYO_2585 ef88a05d03d99839470beb2c88aebe2c 394 PIRSF PIRSF001491 5 394 1.4E-167 T 14-10-2018 IPR010045 Phosphopentomutase GO:0000287|GO:0005737|GO:0008973|GO:0009117|GO:0043094 KEGG: 00030+5.4.2.7|KEGG: 00230+5.4.2.7|MetaCyc: PWY-7180 GYO_2585 ef88a05d03d99839470beb2c88aebe2c 394 Pfam PF01676 Metalloenzyme superfamily 8 381 1.5E-47 T 14-10-2018 IPR006124 Metalloenzyme GO:0003824|GO:0046872 GYO_2585 ef88a05d03d99839470beb2c88aebe2c 394 Hamap MF_00740 Phosphopentomutase [deoB]. 6 390 55.345 T 14-10-2018 IPR010045 Phosphopentomutase GO:0000287|GO:0005737|GO:0008973|GO:0009117|GO:0043094 KEGG: 00030+5.4.2.7|KEGG: 00230+5.4.2.7|MetaCyc: PWY-7180 GYO_2585 ef88a05d03d99839470beb2c88aebe2c 394 Gene3D G3DSA:3.40.720.10 7 390 1.3E-176 T 14-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 GYO_0578 b6a0de8e3e0d1059960bbb4517d4fdbd 206 Pfam PF02441 Flavoprotein 16 177 5.3E-27 T 14-10-2018 IPR003382 Flavoprotein GO:0003824 Reactome: R-HSA-196783 GYO_0578 b6a0de8e3e0d1059960bbb4517d4fdbd 206 TIGRFAM TIGR00421 ubiX_pad: polyprenyl P-hydroxybenzoate and phenylacrylic acid decarboxylases 16 196 2.0E-92 T 14-10-2018 IPR004507 Flavin prenyltransferase UbiX-like GYO_0578 b6a0de8e3e0d1059960bbb4517d4fdbd 206 Hamap MF_01986 Probable UbiX-like flavin prenyltransferase. 15 202 51.174 T 14-10-2018 IPR032901 Probable UbiX-like flavin prenyltransferase GYO_0578 b6a0de8e3e0d1059960bbb4517d4fdbd 206 Gene3D G3DSA:3.40.50.1950 15 205 1.7E-80 T 14-10-2018 IPR036551 Flavin prenyltransferase-like GO:0003824 Reactome: R-HSA-196783 GYO_0578 b6a0de8e3e0d1059960bbb4517d4fdbd 206 SUPERFAMILY SSF52507 16 198 2.49E-63 T 14-10-2018 IPR036551 Flavin prenyltransferase-like GO:0003824 Reactome: R-HSA-196783 GYO_0578 b6a0de8e3e0d1059960bbb4517d4fdbd 206 Hamap MF_01984 Flavin prenyltransferase UbiX [ubiX]. 15 198 37.543 T 14-10-2018 IPR004507 Flavin prenyltransferase UbiX-like GYO_2485 33204210e78354464c8f47e7c4f48b06 179 Hamap MF_00760 UPF0302 protein . 2 178 33.272 T 14-10-2018 IPR011188 Uncharacterised protein family UPF0302 GYO_2485 33204210e78354464c8f47e7c4f48b06 179 Gene3D G3DSA:4.10.810.10 124 179 2.4E-20 T 14-10-2018 IPR027393 Virus scaffolding protein, C-terminal GO:0005515 GYO_2485 33204210e78354464c8f47e7c4f48b06 179 Pfam PF08858 IDEAL domain 139 175 4.9E-14 T 14-10-2018 IPR014957 IDEAL domain GYO_2485 33204210e78354464c8f47e7c4f48b06 179 PIRSF PIRSF007165 1 179 1.6E-83 T 14-10-2018 IPR011188 Uncharacterised protein family UPF0302 GYO_2485 33204210e78354464c8f47e7c4f48b06 179 Gene3D G3DSA:1.20.1440.290 1 123 2.4E-55 T 14-10-2018 IPR038091 UPF0302, N-terminal domain superfamily GYO_2485 33204210e78354464c8f47e7c4f48b06 179 SMART SM00914 139 175 6.1E-14 T 14-10-2018 IPR014957 IDEAL domain GYO_2485 33204210e78354464c8f47e7c4f48b06 179 Pfam PF08864 UPF0302 domain 9 112 6.9E-47 T 14-10-2018 IPR014963 Uncharacterised domain UPF0302, N-terminal GYO_1602 e9bd7c3bf425cb87c6e117d2394c2719 205 SUPERFAMILY SSF109755 75 197 2.62E-5 T 14-10-2018 GYO_1602 e9bd7c3bf425cb87c6e117d2394c2719 205 Gene3D G3DSA:1.20.58.220 9 205 4.7E-53 T 14-10-2018 IPR038078 PhoU-like domain superfamily GYO_1602 e9bd7c3bf425cb87c6e117d2394c2719 205 Pfam PF01865 Protein of unknown function DUF47 9 202 1.0E-22 T 14-10-2018 IPR018445 Putative phosphate transport regulator GYO_2767 aeb7cfdd04afec6b6c7224a95811b4ac 202 PRINTS PR01703 Manganese superoxide dismutase signature 126 134 1.0E-27 T 14-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 GYO_2767 aeb7cfdd04afec6b6c7224a95811b4ac 202 PRINTS PR01703 Manganese superoxide dismutase signature 27 40 1.0E-27 T 14-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 GYO_2767 aeb7cfdd04afec6b6c7224a95811b4ac 202 PRINTS PR01703 Manganese superoxide dismutase signature 6 17 1.0E-27 T 14-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 GYO_2767 aeb7cfdd04afec6b6c7224a95811b4ac 202 PRINTS PR01703 Manganese superoxide dismutase signature 162 174 1.0E-27 T 14-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 GYO_2767 aeb7cfdd04afec6b6c7224a95811b4ac 202 PRINTS PR01703 Manganese superoxide dismutase signature 73 86 1.0E-27 T 14-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 GYO_2767 aeb7cfdd04afec6b6c7224a95811b4ac 202 ProSitePatterns PS00088 Manganese and iron superoxide dismutases signature. 164 171 - T 14-10-2018 IPR019833 Manganese/iron superoxide dismutase, binding site GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 GYO_2767 aeb7cfdd04afec6b6c7224a95811b4ac 202 SUPERFAMILY SSF54719 92 201 7.73E-49 T 14-10-2018 IPR036314 Manganese/iron superoxide dismutase, C-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 GYO_2767 aeb7cfdd04afec6b6c7224a95811b4ac 202 SUPERFAMILY SSF46609 1 91 3.93E-38 T 14-10-2018 IPR036324 Manganese/iron superoxide dismutase, N-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 GYO_2767 aeb7cfdd04afec6b6c7224a95811b4ac 202 Pfam PF02777 Iron/manganese superoxide dismutases, C-terminal domain 97 195 2.9E-43 T 14-10-2018 IPR019832 Manganese/iron superoxide dismutase, C-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 GYO_2767 aeb7cfdd04afec6b6c7224a95811b4ac 202 Pfam PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain 2 90 3.7E-34 T 14-10-2018 IPR019831 Manganese/iron superoxide dismutase, N-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 GYO_2767 aeb7cfdd04afec6b6c7224a95811b4ac 202 Gene3D G3DSA:1.10.287.990 20 90 2.6E-32 T 14-10-2018 IPR036324 Manganese/iron superoxide dismutase, N-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 GYO_2767 aeb7cfdd04afec6b6c7224a95811b4ac 202 Gene3D G3DSA:2.40.500.20 91 202 4.4E-53 T 14-10-2018 IPR036314 Manganese/iron superoxide dismutase, C-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 GYO_2767 aeb7cfdd04afec6b6c7224a95811b4ac 202 PIRSF PIRSF000349 1 202 4.6E-87 T 14-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 GYO_4370 d19bf179670c6dff631e9472032f2837 622 Pfam PF02687 FtsX-like permease family 85 175 2.7E-7 T 14-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 GYO_4370 d19bf179670c6dff631e9472032f2837 622 PIRSF PIRSF018968 1 622 1.1E-132 T 14-10-2018 IPR027022 ABC transporter permease protein, BceB-type GO:0055085 GYO_1446 cb2961da1f56352165547c4f3482fcd3 330 Gene3D G3DSA:1.10.240.10 184 294 1.2E-137 T 14-10-2018 GYO_1446 cb2961da1f56352165547c4f3482fcd3 330 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 11 20 - T 14-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 GYO_1446 cb2961da1f56352165547c4f3482fcd3 330 Pfam PF00579 tRNA synthetases class I (W and Y) 4 281 9.8E-82 T 14-10-2018 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 GYO_1446 cb2961da1f56352165547c4f3482fcd3 330 SUPERFAMILY SSF52374 4 325 1.31E-100 T 14-10-2018 GYO_1446 cb2961da1f56352165547c4f3482fcd3 330 TIGRFAM TIGR00233 trpS: tryptophan--tRNA ligase 1 325 4.1E-127 T 14-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 GYO_1446 cb2961da1f56352165547c4f3482fcd3 330 Gene3D G3DSA:3.40.50.620 5 324 1.2E-137 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold GYO_1446 cb2961da1f56352165547c4f3482fcd3 330 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 15 31 1.5E-29 T 14-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 GYO_1446 cb2961da1f56352165547c4f3482fcd3 330 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 193 203 1.5E-29 T 14-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 GYO_1446 cb2961da1f56352165547c4f3482fcd3 330 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 65 84 1.5E-29 T 14-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 GYO_1446 cb2961da1f56352165547c4f3482fcd3 330 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 140 161 1.5E-29 T 14-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 GYO_1446 cb2961da1f56352165547c4f3482fcd3 330 Hamap MF_00140_B Tryptophan--tRNA ligase [trpS]. 2 326 42.564 T 14-10-2018 IPR024109 Tryptophan-tRNA ligase, bacterial-type GO:0004830 KEGG: 00970+6.1.1.2|Reactome: R-HSA-379726 GYO_3159 8dd8fb0cc392b8f48a0d09ff1f92ec9b 880 Gene3D G3DSA:3.30.70.370 615 876 6.8E-109 T 14-10-2018 GYO_3159 8dd8fb0cc392b8f48a0d09ff1f92ec9b 880 SUPERFAMILY SSF47807 173 287 2.24E-35 T 14-10-2018 IPR036279 5'-3' exonuclease, C-terminal domain superfamily GYO_3159 8dd8fb0cc392b8f48a0d09ff1f92ec9b 880 Gene3D G3DSA:3.30.420.10 301 493 4.3E-59 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 GYO_3159 8dd8fb0cc392b8f48a0d09ff1f92ec9b 880 Pfam PF00476 DNA polymerase family A 502 878 9.2E-162 T 14-10-2018 IPR001098 DNA-directed DNA polymerase, family A, palm domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 GYO_3159 8dd8fb0cc392b8f48a0d09ff1f92ec9b 880 Pfam PF02739 5'-3' exonuclease, N-terminal resolvase-like domain 6 172 9.7E-54 T 14-10-2018 IPR020046 5'-3' exonuclease, alpha-helical arch, N-terminal GO:0003677 GYO_3159 8dd8fb0cc392b8f48a0d09ff1f92ec9b 880 SUPERFAMILY SSF88723 4 172 5.89E-55 T 14-10-2018 IPR029060 PIN-like domain superfamily GYO_3159 8dd8fb0cc392b8f48a0d09ff1f92ec9b 880 SMART SM00474 305 470 7.3E-28 T 14-10-2018 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 GYO_3159 8dd8fb0cc392b8f48a0d09ff1f92ec9b 880 SUPERFAMILY SSF56672 474 880 1.22E-159 T 14-10-2018 GYO_3159 8dd8fb0cc392b8f48a0d09ff1f92ec9b 880 PRINTS PR00868 DNA-polymerase family A (pol I) signature 706 731 1.0E-81 T 14-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 GYO_3159 8dd8fb0cc392b8f48a0d09ff1f92ec9b 880 PRINTS PR00868 DNA-polymerase family A (pol I) signature 765 776 1.0E-81 T 14-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 GYO_3159 8dd8fb0cc392b8f48a0d09ff1f92ec9b 880 PRINTS PR00868 DNA-polymerase family A (pol I) signature 606 628 1.0E-81 T 14-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 GYO_3159 8dd8fb0cc392b8f48a0d09ff1f92ec9b 880 PRINTS PR00868 DNA-polymerase family A (pol I) signature 743 754 1.0E-81 T 14-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 GYO_3159 8dd8fb0cc392b8f48a0d09ff1f92ec9b 880 PRINTS PR00868 DNA-polymerase family A (pol I) signature 652 675 1.0E-81 T 14-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 GYO_3159 8dd8fb0cc392b8f48a0d09ff1f92ec9b 880 PRINTS PR00868 DNA-polymerase family A (pol I) signature 682 695 1.0E-81 T 14-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 GYO_3159 8dd8fb0cc392b8f48a0d09ff1f92ec9b 880 PRINTS PR00868 DNA-polymerase family A (pol I) signature 827 840 1.0E-81 T 14-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 GYO_3159 8dd8fb0cc392b8f48a0d09ff1f92ec9b 880 PRINTS PR00868 DNA-polymerase family A (pol I) signature 797 813 1.0E-81 T 14-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 GYO_3159 8dd8fb0cc392b8f48a0d09ff1f92ec9b 880 PRINTS PR00868 DNA-polymerase family A (pol I) signature 629 644 1.0E-81 T 14-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 GYO_3159 8dd8fb0cc392b8f48a0d09ff1f92ec9b 880 TIGRFAM TIGR00593 pola: DNA polymerase I 7 880 0.0 T 14-10-2018 IPR018320 DNA polymerase 1 GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 GYO_3159 8dd8fb0cc392b8f48a0d09ff1f92ec9b 880 SMART SM00475 5 264 4.4E-157 T 14-10-2018 IPR002421 5'-3' exonuclease, N-terminal GO:0003677 GYO_3159 8dd8fb0cc392b8f48a0d09ff1f92ec9b 880 Gene3D G3DSA:3.40.50.1010 7 280 5.6E-101 T 14-10-2018 GYO_3159 8dd8fb0cc392b8f48a0d09ff1f92ec9b 880 Gene3D G3DSA:1.10.150.20 661 804 6.8E-109 T 14-10-2018 GYO_3159 8dd8fb0cc392b8f48a0d09ff1f92ec9b 880 Gene3D G3DSA:1.20.1060.10 495 609 6.0E-45 T 14-10-2018 GYO_3159 8dd8fb0cc392b8f48a0d09ff1f92ec9b 880 SUPERFAMILY SSF53098 305 471 1.67E-42 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily GYO_3159 8dd8fb0cc392b8f48a0d09ff1f92ec9b 880 SMART SM00279 175 210 9.0E-19 T 14-10-2018 IPR008918 Helix-hairpin-helix motif, class 2 GO:0003677|GO:0003824 GYO_3159 8dd8fb0cc392b8f48a0d09ff1f92ec9b 880 ProSitePatterns PS00447 DNA polymerase family A signature. 706 725 - T 14-10-2018 IPR019760 DNA-directed DNA polymerase, family A, conserved site GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 GYO_3159 8dd8fb0cc392b8f48a0d09ff1f92ec9b 880 Gene3D G3DSA:1.10.150.20 176 249 5.6E-101 T 14-10-2018 GYO_3159 8dd8fb0cc392b8f48a0d09ff1f92ec9b 880 Pfam PF01367 5'-3' exonuclease, C-terminal SAM fold 174 268 4.9E-36 T 14-10-2018 IPR020045 DNA polymerase I-like, H3TH domain GO:0003677|GO:0003824 GYO_3159 8dd8fb0cc392b8f48a0d09ff1f92ec9b 880 SMART SM00482 637 844 7.2E-117 T 14-10-2018 IPR001098 DNA-directed DNA polymerase, family A, palm domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 GYO_2012 1276bbea5b9d87be0f4c8a756a5a2d48 564 Gene3D G3DSA:3.30.930.10 11 462 2.7E-260 T 14-10-2018 GYO_2012 1276bbea5b9d87be0f4c8a756a5a2d48 564 PRINTS PR01046 Prolyl-tRNA synthetase signature 104 115 7.7E-17 T 14-10-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 GYO_2012 1276bbea5b9d87be0f4c8a756a5a2d48 564 PRINTS PR01046 Prolyl-tRNA synthetase signature 134 142 7.7E-17 T 14-10-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 GYO_2012 1276bbea5b9d87be0f4c8a756a5a2d48 564 PRINTS PR01046 Prolyl-tRNA synthetase signature 68 86 7.7E-17 T 14-10-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 GYO_2012 1276bbea5b9d87be0f4c8a756a5a2d48 564 PRINTS PR01046 Prolyl-tRNA synthetase signature 144 155 7.7E-17 T 14-10-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 GYO_2012 1276bbea5b9d87be0f4c8a756a5a2d48 564 TIGRFAM TIGR00409 proS_fam_II: proline--tRNA ligase 1 564 6.9E-267 T 14-10-2018 IPR004500 Prolyl-tRNA synthetase, class IIa, bacterial-type GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 GYO_2012 1276bbea5b9d87be0f4c8a756a5a2d48 564 Pfam PF04073 Aminoacyl-tRNA editing domain 257 371 4.6E-30 T 14-10-2018 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 GYO_2012 1276bbea5b9d87be0f4c8a756a5a2d48 564 Gene3D G3DSA:3.90.960.10 240 386 2.7E-260 T 14-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 GYO_2012 1276bbea5b9d87be0f4c8a756a5a2d48 564 Pfam PF03129 Anticodon binding domain 474 563 6.9E-20 T 14-10-2018 IPR004154 Anticodon-binding GYO_2012 1276bbea5b9d87be0f4c8a756a5a2d48 564 Hamap MF_01569 Proline--tRNA ligase [proS]. 1 563 41.471 T 14-10-2018 IPR023717 Prolyl-tRNA synthetase, class IIa, type 1 GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 GYO_2012 1276bbea5b9d87be0f4c8a756a5a2d48 564 SUPERFAMILY SSF55681 9 475 3.25E-101 T 14-10-2018 GYO_2012 1276bbea5b9d87be0f4c8a756a5a2d48 564 SUPERFAMILY SSF52954 460 563 1.03E-28 T 14-10-2018 GYO_2012 1276bbea5b9d87be0f4c8a756a5a2d48 564 SUPERFAMILY SSF55826 218 386 7.33E-36 T 14-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 GYO_2012 1276bbea5b9d87be0f4c8a756a5a2d48 564 Gene3D G3DSA:3.40.50.800 4 550 2.7E-260 T 14-10-2018 IPR036621 Anticodon-binding domain superfamily GYO_2012 1276bbea5b9d87be0f4c8a756a5a2d48 564 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 95 456 5.5E-55 T 14-10-2018 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 GYO_2012 1276bbea5b9d87be0f4c8a756a5a2d48 564 PIRSF PIRSF001535 1 564 5.4E-264 T 14-10-2018 IPR023717 Prolyl-tRNA synthetase, class IIa, type 1 GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 GYO_1607 cf3ed3cb7de00f36b54c6709677cf6bc 323 Gene3D G3DSA:3.90.550.10 2 201 1.1E-35 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases GYO_1607 cf3ed3cb7de00f36b54c6709677cf6bc 323 SUPERFAMILY SSF53448 6 258 5.3E-34 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases GYO_1607 cf3ed3cb7de00f36b54c6709677cf6bc 323 Pfam PF00535 Glycosyl transferase family 2 8 170 1.4E-35 T 14-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 GYO_1533 de827a501371959901a55604d1893574 250 SUPERFAMILY SSF52540 8 242 1.7E-57 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase GYO_1533 de827a501371959901a55604d1893574 250 Gene3D G3DSA:3.40.50.300 9 246 2.6E-64 T 14-10-2018 GYO_1533 de827a501371959901a55604d1893574 250 SMART SM00382 41 222 5.5E-11 T 14-10-2018 IPR003593 AAA+ ATPase domain GYO_1533 de827a501371959901a55604d1893574 250 Pfam PF00005 ABC transporter 32 173 6.2E-28 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 GYO_1533 de827a501371959901a55604d1893574 250 ProSitePatterns PS00211 ABC transporters family signature. 145 159 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 GYO_0251 565fbc7224c63df7a00a488d0b9eaa96 72 TIGRFAM TIGR01593 holin_tox_secr: toxin secretion/phage lysis holin 1 65 1.4E-15 T 14-10-2018 IPR006480 Bacteriophage holin family GYO_0251 565fbc7224c63df7a00a488d0b9eaa96 72 Pfam PF05105 Bacteriophage holin family 1 57 9.5E-14 T 14-10-2018 IPR006480 Bacteriophage holin family GYO_0330 565fbc7224c63df7a00a488d0b9eaa96 72 TIGRFAM TIGR01593 holin_tox_secr: toxin secretion/phage lysis holin 1 65 1.4E-15 T 14-10-2018 IPR006480 Bacteriophage holin family GYO_0330 565fbc7224c63df7a00a488d0b9eaa96 72 Pfam PF05105 Bacteriophage holin family 1 57 9.5E-14 T 14-10-2018 IPR006480 Bacteriophage holin family GYO_2082 bbabf87897b06bee5e0c20c64b8c0a56 442 Gene3D G3DSA:3.40.50.200 119 440 5.9E-104 T 14-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 GYO_2082 bbabf87897b06bee5e0c20c64b8c0a56 442 ProSitePatterns PS00138 Serine proteases, subtilase family, serine active site. 382 392 - T 14-10-2018 IPR023828 Peptidase S8, subtilisin, Ser-active site GYO_2082 bbabf87897b06bee5e0c20c64b8c0a56 442 ProSitePatterns PS00137 Serine proteases, subtilase family, histidine active site. 187 197 - T 14-10-2018 IPR022398 Peptidase S8, subtilisin, His-active site GYO_2082 bbabf87897b06bee5e0c20c64b8c0a56 442 Pfam PF00082 Subtilase family 146 431 1.3E-57 T 14-10-2018 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 GYO_2082 bbabf87897b06bee5e0c20c64b8c0a56 442 PRINTS PR00723 Subtilisin serine protease family (S8) signature 381 397 8.1E-19 T 14-10-2018 IPR015500 Peptidase S8, subtilisin-related GYO_2082 bbabf87897b06bee5e0c20c64b8c0a56 442 PRINTS PR00723 Subtilisin serine protease family (S8) signature 146 165 8.1E-19 T 14-10-2018 IPR015500 Peptidase S8, subtilisin-related GYO_2082 bbabf87897b06bee5e0c20c64b8c0a56 442 PRINTS PR00723 Subtilisin serine protease family (S8) signature 183 196 8.1E-19 T 14-10-2018 IPR015500 Peptidase S8, subtilisin-related GYO_2082 bbabf87897b06bee5e0c20c64b8c0a56 442 SUPERFAMILY SSF52743 139 439 2.88E-86 T 14-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 GYO_2082 bbabf87897b06bee5e0c20c64b8c0a56 442 ProSitePatterns PS00136 Serine proteases, subtilase family, aspartic acid active site. 151 161 - T 14-10-2018 IPR023827 Peptidase S8, subtilisin, Asp-active site GYO_3543 4466813c321f57e29813d48d27a80bb6 179 Pfam PF00578 AhpC/TSA family 40 155 1.1E-30 T 14-10-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 GYO_3543 4466813c321f57e29813d48d27a80bb6 179 ProSitePatterns PS00194 Thioredoxin family active site. 68 86 - T 14-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 GYO_3543 4466813c321f57e29813d48d27a80bb6 179 SUPERFAMILY SSF52833 11 174 2.07E-41 T 14-10-2018 IPR036249 Thioredoxin-like superfamily GYO_3543 4466813c321f57e29813d48d27a80bb6 179 Gene3D G3DSA:3.40.30.10 27 179 1.1E-44 T 14-10-2018 GYO_3950 d776425ab71f548877441b82fbea63a0 329 Pfam PF00356 Bacterial regulatory proteins, lacI family 3 48 2.5E-23 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 GYO_3950 d776425ab71f548877441b82fbea63a0 329 Gene3D G3DSA:3.40.50.2300 61 301 1.3E-66 T 14-10-2018 GYO_3950 d776425ab71f548877441b82fbea63a0 329 SUPERFAMILY SSF47413 2 59 3.94E-19 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 GYO_3950 d776425ab71f548877441b82fbea63a0 329 Gene3D G3DSA:1.10.260.40 3 58 1.1E-24 T 14-10-2018 GYO_3950 d776425ab71f548877441b82fbea63a0 329 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 13 23 2.4E-6 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 GYO_3950 d776425ab71f548877441b82fbea63a0 329 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 3 13 2.4E-6 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 GYO_3950 d776425ab71f548877441b82fbea63a0 329 SMART SM00354 1 71 1.1E-38 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 GYO_3950 d776425ab71f548877441b82fbea63a0 329 ProSitePatterns PS00356 LacI-type HTH domain signature. 4 22 - T 14-10-2018 GYO_3950 d776425ab71f548877441b82fbea63a0 329 SUPERFAMILY SSF53822 60 324 1.28E-63 T 14-10-2018 IPR028082 Periplasmic binding protein-like I GYO_3950 d776425ab71f548877441b82fbea63a0 329 Pfam PF13377 Periplasmic binding protein-like domain 174 322 1.1E-27 T 14-10-2018 GYO_3950 d776425ab71f548877441b82fbea63a0 329 Gene3D G3DSA:3.40.50.2300 154 283 1.3E-66 T 14-10-2018 GYO_2477 b9c5533c79c1be2ed178cae829632eab 111 Pfam PF03819 MazG nucleotide pyrophosphohydrolase domain 25 104 1.1E-21 T 14-10-2018 IPR004518 NTP pyrophosphohydrolase MazG, putative catalytic core GYO_2477 b9c5533c79c1be2ed178cae829632eab 111 Gene3D G3DSA:1.10.287.1080 1 111 1.1E-37 T 14-10-2018 GYO_2477 b9c5533c79c1be2ed178cae829632eab 111 SUPERFAMILY SSF101386 4 104 9.32E-29 T 14-10-2018 GYO_2477 b9c5533c79c1be2ed178cae829632eab 111 PIRSF PIRSF029904 1 111 1.4E-54 T 14-10-2018 IPR012359 NTP pyrophosphohydrolase MazG-related, YpjD GYO_1517 2ef00f02f2d343d45fc6a9d392b39d77 55 Pfam PF14070 Putative motility protein 3 54 2.8E-16 T 14-10-2018 IPR025906 Putative motility protein GYO_0370 009e710e74e391d25522b5ff01c7eddd 187 ProSitePatterns PS01063 Sigma-70 factors ECF subfamily signature. 45 76 - T 14-10-2018 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 GYO_0370 009e710e74e391d25522b5ff01c7eddd 187 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 18 184 3.2E-36 T 14-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 GYO_0370 009e710e74e391d25522b5ff01c7eddd 187 Pfam PF04542 Sigma-70 region 2 25 89 5.3E-22 T 14-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 GYO_0370 009e710e74e391d25522b5ff01c7eddd 187 SUPERFAMILY SSF88659 117 185 3.36E-17 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like GYO_0370 009e710e74e391d25522b5ff01c7eddd 187 Gene3D G3DSA:1.10.10.10 121 187 2.1E-20 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily GYO_0370 009e710e74e391d25522b5ff01c7eddd 187 Gene3D G3DSA:1.10.1740.10 3 109 6.4E-32 T 14-10-2018 GYO_0370 009e710e74e391d25522b5ff01c7eddd 187 TIGRFAM TIGR02948 SigW_bacill: RNA polymerase sigma-W factor 1 187 2.4E-109 T 14-10-2018 IPR014294 RNA polymerase sigma-W, bacillaceae GYO_0370 009e710e74e391d25522b5ff01c7eddd 187 Pfam PF08281 Sigma-70, region 4 129 180 3.8E-15 T 14-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 GYO_0370 009e710e74e391d25522b5ff01c7eddd 187 SUPERFAMILY SSF88946 7 98 1.33E-30 T 14-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 GYO_0349 33c07d26b1e0013146bf73ca907a692d 478 Gene3D G3DSA:3.30.750.24 389 478 1.4E-26 T 14-10-2018 IPR036513 STAS domain superfamily GYO_0349 33c07d26b1e0013146bf73ca907a692d 478 ProSitePatterns PS01130 SLC26A transporters signature. 44 65 - T 14-10-2018 IPR018045 Sulphate anion transporter, conserved site GO:0008271|GO:0008272 Reactome: R-HSA-427601 GYO_0349 33c07d26b1e0013146bf73ca907a692d 478 TIGRFAM TIGR00815 sulP: sulfate permease 13 477 3.9E-115 T 14-10-2018 IPR001902 SLC26A/SulP transporter GO:0008271|GO:0008272|GO:0016020|GO:0055085 GYO_0349 33c07d26b1e0013146bf73ca907a692d 478 Pfam PF00916 Sulfate permease family 16 144 1.6E-26 T 14-10-2018 IPR011547 SLC26A/SulP transporter domain GO:0008272|GO:0015116|GO:0016021 GYO_0349 33c07d26b1e0013146bf73ca907a692d 478 Pfam PF00916 Sulfate permease family 162 356 4.3E-32 T 14-10-2018 IPR011547 SLC26A/SulP transporter domain GO:0008272|GO:0015116|GO:0016021 GYO_0349 33c07d26b1e0013146bf73ca907a692d 478 Pfam PF01740 STAS domain 398 475 5.1E-7 T 14-10-2018 IPR002645 STAS domain GYO_0349 33c07d26b1e0013146bf73ca907a692d 478 SUPERFAMILY SSF52091 395 476 2.16E-12 T 14-10-2018 IPR036513 STAS domain superfamily GYO_3051 ce0f1cb8178c36c158b02ba372f623ed 430 PIRSF PIRSF001563 1 430 4.5E-163 T 14-10-2018 IPR001645 Folylpolyglutamate synthetase GO:0004326|GO:0005524|GO:0009396 KEGG: 00790+6.3.2.17|MetaCyc: PWY-2161|Reactome: R-HSA-196757 GYO_3051 ce0f1cb8178c36c158b02ba372f623ed 430 Gene3D G3DSA:3.40.1190.10 3 300 2.1E-104 T 14-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 GYO_3051 ce0f1cb8178c36c158b02ba372f623ed 430 Pfam PF02875 Mur ligase family, glutamate ligase domain 299 376 1.5E-11 T 14-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 GYO_3051 ce0f1cb8178c36c158b02ba372f623ed 430 SUPERFAMILY SSF53623 4 299 1.14E-95 T 14-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 GYO_3051 ce0f1cb8178c36c158b02ba372f623ed 430 ProSitePatterns PS01012 Folylpolyglutamate synthase signature 2. 143 158 - T 14-10-2018 IPR018109 Folylpolyglutamate synthetase, conserved site GO:0004326|GO:0005524|GO:0009396 Reactome: R-HSA-196757 GYO_3051 ce0f1cb8178c36c158b02ba372f623ed 430 Gene3D G3DSA:3.90.190.20 301 430 1.1E-29 T 14-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 GYO_3051 ce0f1cb8178c36c158b02ba372f623ed 430 SUPERFAMILY SSF53244 301 429 1.67E-25 T 14-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 GYO_3051 ce0f1cb8178c36c158b02ba372f623ed 430 Pfam PF08245 Mur ligase middle domain 46 274 1.3E-14 T 14-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 GYO_3051 ce0f1cb8178c36c158b02ba372f623ed 430 ProSitePatterns PS01011 Folylpolyglutamate synthase signature 1. 44 67 - T 14-10-2018 IPR018109 Folylpolyglutamate synthetase, conserved site GO:0004326|GO:0005524|GO:0009396 Reactome: R-HSA-196757 GYO_3051 ce0f1cb8178c36c158b02ba372f623ed 430 TIGRFAM TIGR01499 folC: bifunctional protein FolC 24 428 4.1E-141 T 14-10-2018 IPR001645 Folylpolyglutamate synthetase GO:0004326|GO:0005524|GO:0009396 KEGG: 00790+6.3.2.17|MetaCyc: PWY-2161|Reactome: R-HSA-196757 GYO_4082 f18cf3db272ae154c642bf2a48c92bab 195 PIRSF PIRSF035805 5 195 3.6E-64 T 14-10-2018 IPR001267 Thymidine kinase GO:0004797|GO:0005524 KEGG: 00240+2.7.1.21|KEGG: 00983+2.7.1.21|MetaCyc: PWY-7199|Reactome: R-HSA-539107|Reactome: R-HSA-73614 GYO_4082 f18cf3db272ae154c642bf2a48c92bab 195 Hamap MF_00124 Thymidine kinase [tdk]. 7 190 37.942 T 14-10-2018 IPR001267 Thymidine kinase GO:0004797|GO:0005524 KEGG: 00240+2.7.1.21|KEGG: 00983+2.7.1.21|MetaCyc: PWY-7199|Reactome: R-HSA-539107|Reactome: R-HSA-73614 GYO_4082 f18cf3db272ae154c642bf2a48c92bab 195 Gene3D G3DSA:3.40.50.300 1 141 9.9E-58 T 14-10-2018 GYO_4082 f18cf3db272ae154c642bf2a48c92bab 195 SUPERFAMILY SSF57716 142 190 3.07E-16 T 14-10-2018 GYO_4082 f18cf3db272ae154c642bf2a48c92bab 195 ProSitePatterns PS00603 Thymidine kinase cellular-type signature. 174 187 - T 14-10-2018 IPR020633 Thymidine kinase, conserved site GO:0004797|GO:0005524 KEGG: 00240+2.7.1.21|KEGG: 00983+2.7.1.21|MetaCyc: PWY-7199|Reactome: R-HSA-539107|Reactome: R-HSA-73614 GYO_4082 f18cf3db272ae154c642bf2a48c92bab 195 Pfam PF00265 Thymidine kinase 8 187 3.8E-63 T 14-10-2018 IPR001267 Thymidine kinase GO:0004797|GO:0005524 KEGG: 00240+2.7.1.21|KEGG: 00983+2.7.1.21|MetaCyc: PWY-7199|Reactome: R-HSA-539107|Reactome: R-HSA-73614 GYO_4082 f18cf3db272ae154c642bf2a48c92bab 195 SUPERFAMILY SSF52540 8 142 1.06E-42 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase GYO_4082 f18cf3db272ae154c642bf2a48c92bab 195 Gene3D G3DSA:3.30.60.20 142 195 1.5E-27 T 14-10-2018 GYO_2982 cf62c332b53becdf1052daf1c8feaac5 878 Pfam PF01411 tRNA synthetases class II (A) 8 557 1.3E-221 T 14-10-2018 IPR018164 Alanyl-tRNA synthetase, class IIc, N-terminal GO:0000166|GO:0004813|GO:0005524|GO:0006419 KEGG: 00970+6.1.1.7 GYO_2982 cf62c332b53becdf1052daf1c8feaac5 878 Pfam PF07973 Threonyl and Alanyl tRNA synthetase second additional domain 655 698 7.5E-19 T 14-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 GYO_2982 cf62c332b53becdf1052daf1c8feaac5 878 Gene3D G3DSA:3.10.310.40 765 876 2.5E-36 T 14-10-2018 GYO_2982 cf62c332b53becdf1052daf1c8feaac5 878 Gene3D G3DSA:3.30.930.10 3 242 1.8E-95 T 14-10-2018 GYO_2982 cf62c332b53becdf1052daf1c8feaac5 878 Hamap MF_00036_B Alanine--tRNA ligase [alaS]. 1 878 187.374 T 14-10-2018 IPR023033 Alanine-tRNA ligase, eukaryota/bacteria GO:0004813 KEGG: 00970+6.1.1.7 GYO_2982 cf62c332b53becdf1052daf1c8feaac5 878 SUPERFAMILY SSF50447 456 554 5.65E-18 T 14-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily GYO_2982 cf62c332b53becdf1052daf1c8feaac5 878 SMART SM00863 655 698 8.8E-22 T 14-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 GYO_2982 cf62c332b53becdf1052daf1c8feaac5 878 Gene3D G3DSA:3.30.980.10 564 699 1.1E-52 T 14-10-2018 GYO_2982 cf62c332b53becdf1052daf1c8feaac5 878 SUPERFAMILY SSF55186 554 719 4.58E-53 T 14-10-2018 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily GO:0000166 GYO_2982 cf62c332b53becdf1052daf1c8feaac5 878 PRINTS PR00980 Alanyl-tRNA synthetase signature 300 313 4.5E-32 T 14-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 GYO_2982 cf62c332b53becdf1052daf1c8feaac5 878 PRINTS PR00980 Alanyl-tRNA synthetase signature 73 84 4.5E-32 T 14-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 GYO_2982 cf62c332b53becdf1052daf1c8feaac5 878 PRINTS PR00980 Alanyl-tRNA synthetase signature 199 210 4.5E-32 T 14-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 GYO_2982 cf62c332b53becdf1052daf1c8feaac5 878 PRINTS PR00980 Alanyl-tRNA synthetase signature 276 292 4.5E-32 T 14-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 GYO_2982 cf62c332b53becdf1052daf1c8feaac5 878 PRINTS PR00980 Alanyl-tRNA synthetase signature 226 239 4.5E-32 T 14-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 GYO_2982 cf62c332b53becdf1052daf1c8feaac5 878 TIGRFAM TIGR00344 alaS: alanine--tRNA ligase 8 857 0.0 T 14-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 GYO_2982 cf62c332b53becdf1052daf1c8feaac5 878 SUPERFAMILY SSF101353 246 460 8.89E-70 T 14-10-2018 IPR018162 Alanine-tRNA ligase, class IIc, anti-codon-binding domain superfamily GO:0000166|GO:0004813|GO:0005524|GO:0005737|GO:0006419 KEGG: 00970+6.1.1.7 GYO_2982 cf62c332b53becdf1052daf1c8feaac5 878 SUPERFAMILY SSF55681 5 245 9.94E-90 T 14-10-2018 GYO_2982 cf62c332b53becdf1052daf1c8feaac5 878 Gene3D G3DSA:2.40.30.130 453 554 2.4E-10 T 14-10-2018 GYO_2982 cf62c332b53becdf1052daf1c8feaac5 878 Pfam PF02272 DHHA1 domain 735 874 2.4E-30 T 14-10-2018 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7|Reactome: R-HSA-379716 GYO_2982 cf62c332b53becdf1052daf1c8feaac5 878 Gene3D G3DSA:3.30.54.20 626 679 1.1E-52 T 14-10-2018 GYO_2798 a58bc3c0b6f0c356b0c09d76a9eea2d0 157 Hamap MF_00009 Endoribonuclease YbeY [ybeY]. 2 156 24.058 T 14-10-2018 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 GYO_2798 a58bc3c0b6f0c356b0c09d76a9eea2d0 157 Gene3D G3DSA:3.40.390.30 2 157 1.1E-46 T 14-10-2018 IPR023091 Metalloprotease catalytic domain superfamily, predicted GO:0004222 GYO_2798 a58bc3c0b6f0c356b0c09d76a9eea2d0 157 Pfam PF02130 Uncharacterized protein family UPF0054 15 151 2.8E-48 T 14-10-2018 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 GYO_2798 a58bc3c0b6f0c356b0c09d76a9eea2d0 157 ProSitePatterns PS01306 Uncharacterized protein family UPF0054 signature. 122 132 - T 14-10-2018 IPR020549 Endoribonuclease YbeY, conserved site GYO_2798 a58bc3c0b6f0c356b0c09d76a9eea2d0 157 TIGRFAM TIGR00043 TIGR00043: rRNA maturation RNase YbeY 40 153 4.5E-42 T 14-10-2018 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 GYO_2798 a58bc3c0b6f0c356b0c09d76a9eea2d0 157 SUPERFAMILY SSF55486 2 156 3.11E-45 T 14-10-2018 GYO_3599 5f2008715dfe4090ef2e192c91d7d506 145 Pfam PF14039 YusW-like protein 46 136 3.8E-25 T 14-10-2018 IPR025623 YusW-like protein GYO_2434 d5c09ee0201bca51fc34bb34feba41ea 330 ProDom PD024513 PERMEASE 2-KETO-3-DEOXYGLUCONATE MEMBRANE TRANSMEMBRANE SUGAR KDG SYMPORT INNER 2-KETO-3-DEOXY-D-GLUCONATE SYSTEM 14 316 5.0E-120 T 14-10-2018 IPR004684 2-keto-3-deoxygluconate permease GO:0008643|GO:0015649|GO:0016021|GO:0046411 GYO_2434 d5c09ee0201bca51fc34bb34feba41ea 330 Pfam PF03812 2-keto-3-deoxygluconate permease 3 312 1.7E-114 T 14-10-2018 IPR004684 2-keto-3-deoxygluconate permease GO:0008643|GO:0015649|GO:0016021|GO:0046411 GYO_2434 d5c09ee0201bca51fc34bb34feba41ea 330 TIGRFAM TIGR00793 kdgT: 2-keto-3-deoxygluconate transporter 1 313 6.1E-173 T 14-10-2018 IPR018395 2-keto-3-deoxygluconate permease, subgroup GO:0008643|GO:0015649|GO:0016021|GO:0046411 GYO_3831 0b9503a1b181c3af7df71a26b417c308 250 Gene3D G3DSA:3.90.70.10 60 250 2.2E-69 T 14-10-2018 GYO_3831 0b9503a1b181c3af7df71a26b417c308 250 Pfam PF13529 Peptidase_C39 like family 62 222 2.9E-45 T 14-10-2018 IPR039564 Peptidase C39-like GYO_3831 0b9503a1b181c3af7df71a26b417c308 250 PIRSF PIRSF032442 1 250 8.2E-83 T 14-10-2018 IPR016997 Uncharacterised conserved protein UCP032442 GYO_3537 7cf90f79c1ba251b59f02534d376013d 430 ProSitePatterns PS01116 Xanthine/uracil permeases family signature. 334 354 - T 14-10-2018 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 Reactome: R-HSA-196836 GYO_3537 7cf90f79c1ba251b59f02534d376013d 430 TIGRFAM TIGR00801 ncs2: uracil-xanthine permease 5 412 4.6E-146 T 14-10-2018 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 Reactome: R-HSA-196836 GYO_3537 7cf90f79c1ba251b59f02534d376013d 430 TIGRFAM TIGR03173 pbuX: xanthine permease 13 419 4.0E-163 T 14-10-2018 IPR017588 Uric acid permease UacT-like GO:0016021|GO:0022857|GO:0055085 GYO_3537 7cf90f79c1ba251b59f02534d376013d 430 Pfam PF00860 Permease family 9 387 2.8E-125 T 14-10-2018 IPR006043 Xanthine/uracil/vitamin C permease GO:0016020|GO:0022857|GO:0055085 GYO_2382 0169fbafe6cb4232c738b78406c835b6 444 PIRSF PIRSF000521 9 400 5.9E-29 T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 GYO_2382 0169fbafe6cb4232c738b78406c835b6 444 Gene3D G3DSA:3.40.640.10 49 323 2.3E-138 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 GYO_2382 0169fbafe6cb4232c738b78406c835b6 444 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 236 273 - T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 GYO_2382 0169fbafe6cb4232c738b78406c835b6 444 Pfam PF00202 Aminotransferase class-III 16 433 5.6E-94 T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 GYO_2382 0169fbafe6cb4232c738b78406c835b6 444 SUPERFAMILY SSF53383 14 434 2.8E-110 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase GYO_2382 0169fbafe6cb4232c738b78406c835b6 444 Gene3D G3DSA:3.90.1150.10 15 434 2.3E-138 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 GYO_3547 a013fcdb5907dbed883549431918626f 277 SUPERFAMILY SSF56176 12 173 4.52E-33 T 14-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 GYO_3547 a013fcdb5907dbed883549431918626f 277 Gene3D G3DSA:3.30.465.10 10 175 3.0E-37 T 14-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 GYO_3547 a013fcdb5907dbed883549431918626f 277 Gene3D G3DSA:3.30.390.50 176 274 4.6E-5 T 14-10-2018 GYO_3547 a013fcdb5907dbed883549431918626f 277 TIGRFAM TIGR03199 pucC: xanthine dehydrogenase C subunit 17 269 3.7E-109 T 14-10-2018 IPR017612 Xanthine dehydrogenase C subunit KEGG: 00230+1.17.1.4|MetaCyc: PWY-5497|MetaCyc: PWY-5695|MetaCyc: PWY-6538|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-6999 GYO_3547 a013fcdb5907dbed883549431918626f 277 Pfam PF00941 FAD binding domain in molybdopterin dehydrogenase 11 173 5.4E-38 T 14-10-2018 IPR002346 Molybdopterin dehydrogenase, FAD-binding GO:0016491|GO:0055114 GYO_3547 a013fcdb5907dbed883549431918626f 277 SUPERFAMILY SSF55447 178 271 2.67E-8 T 14-10-2018 IPR036683 CO dehydrogenase flavoprotein, C-terminal domain superfamily GYO_0597 090ff99d64dd7c63411fa4fac7b2acd4 315 SUPERFAMILY SSF81345 5 310 1.01E-59 T 14-10-2018 IPR037294 ABC transporter, BtuC-like GYO_0597 090ff99d64dd7c63411fa4fac7b2acd4 315 Gene3D G3DSA:1.10.3470.10 3 314 2.8E-56 T 14-10-2018 IPR037294 ABC transporter, BtuC-like GYO_0597 090ff99d64dd7c63411fa4fac7b2acd4 315 Pfam PF01032 FecCD transport family 33 310 2.0E-52 T 14-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 GYO_2812 8f7f8a5336df700c31bf0ec2f64517f9 256 PIRSF PIRSF015601 1 251 3.8E-64 T 14-10-2018 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 GYO_2812 8f7f8a5336df700c31bf0ec2f64517f9 256 SUPERFAMILY SSF75217 74 251 5.67E-56 T 14-10-2018 IPR029028 Alpha/beta knot methyltransferases GYO_2812 8f7f8a5336df700c31bf0ec2f64517f9 256 Pfam PF04452 RNA methyltransferase 20 247 1.8E-77 T 14-10-2018 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 GYO_2812 8f7f8a5336df700c31bf0ec2f64517f9 256 Gene3D G3DSA:3.40.1280.10 1 256 1.3E-104 T 14-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal GYO_2812 8f7f8a5336df700c31bf0ec2f64517f9 256 SUPERFAMILY SSF88697 2 72 2.98E-17 T 14-10-2018 IPR015947 PUA-like superfamily GYO_2812 8f7f8a5336df700c31bf0ec2f64517f9 256 TIGRFAM TIGR00046 TIGR00046: RNA methyltransferase, RsmE family 3 251 8.6E-93 T 14-10-2018 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 GYO_2356 8f237882c4e9c3b1ca867f73c2901223 59 Gene3D G3DSA:3.30.429.10 1 59 1.8E-19 T 14-10-2018 IPR014347 Tautomerase/MIF superfamily GYO_2356 8f237882c4e9c3b1ca867f73c2901223 59 Pfam PF14552 Tautomerase enzyme 2 48 1.9E-17 T 14-10-2018 IPR037479 Tautomerase, MSAD family GYO_2356 8f237882c4e9c3b1ca867f73c2901223 59 SUPERFAMILY SSF55331 4 58 4.79E-16 T 14-10-2018 IPR014347 Tautomerase/MIF superfamily GYO_1889 14c1281104ec47b614639b34832c488a 257 Gene3D G3DSA:3.10.290.10 171 231 1.7E-10 T 14-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 GYO_1889 14c1281104ec47b614639b34832c488a 257 Gene3D G3DSA:3.30.70.330 80 165 2.2E-26 T 14-10-2018 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily GYO_1889 14c1281104ec47b614639b34832c488a 257 SMART SM00363 181 238 1.6E-13 T 14-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 GYO_1889 14c1281104ec47b614639b34832c488a 257 Pfam PF01479 S4 domain 182 226 6.0E-12 T 14-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 GYO_1889 14c1281104ec47b614639b34832c488a 257 SUPERFAMILY SSF55174 36 251 1.16E-33 T 14-10-2018 GYO_1889 14c1281104ec47b614639b34832c488a 257 Gene3D G3DSA:3.30.1370.160 3 79 6.2E-31 T 14-10-2018 GYO_1046 dabf46ef0c9247f0f334182986e79f66 515 Gene3D G3DSA:3.90.400.10 61 131 3.4E-179 T 14-10-2018 GYO_1046 dabf46ef0c9247f0f334182986e79f66 515 TIGRFAM TIGR02403 trehalose_treC: alpha,alpha-phosphotrehalase 1 510 3.4E-252 T 14-10-2018 IPR012769 Trehalose-6-phosphate hydrolase GO:0005737|GO:0005993|GO:0008788 KEGG: 00500+3.2.1.93 GYO_1046 dabf46ef0c9247f0f334182986e79f66 515 SMART SM00642 1 372 7.8E-129 T 14-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 GYO_1046 dabf46ef0c9247f0f334182986e79f66 515 Gene3D G3DSA:3.20.20.80 1 425 3.4E-179 T 14-10-2018 GYO_1046 dabf46ef0c9247f0f334182986e79f66 515 SUPERFAMILY SSF51011 433 511 7.71E-18 T 14-10-2018 GYO_1046 dabf46ef0c9247f0f334182986e79f66 515 Pfam PF00128 Alpha amylase, catalytic domain 1 330 2.1E-124 T 14-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 GYO_1046 dabf46ef0c9247f0f334182986e79f66 515 SUPERFAMILY SSF51445 1 428 1.73E-137 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily GYO_1046 dabf46ef0c9247f0f334182986e79f66 515 Pfam PF16657 Maltogenic Amylase, C-terminal domain 433 505 7.6E-9 T 14-10-2018 IPR032091 Maltogenic Amylase, C-terminal GYO_1046 dabf46ef0c9247f0f334182986e79f66 515 Gene3D G3DSA:2.60.40.1180 434 515 3.0E-24 T 14-10-2018 IPR013780 Glycosyl hydrolase, all-beta GYO_0567 8d90d75cfb2da8b91364ec54b2a59c21 185 Pfam PF14317 YcxB-like protein 109 168 1.9E-11 T 14-10-2018 IPR025588 YcxB-like protein GYO_1888 e2f17dc2ec15627fd088e06ff5c99159 90 Pfam PF02325 YGGT family 12 78 2.0E-21 T 14-10-2018 IPR003425 CCB3/YggT GO:0016020 GYO_3263 5e2af5ef5ca2ef606964719dbb5abb58 498 SUPERFAMILY SSF53850 22 496 9.13E-92 T 14-10-2018 GYO_3263 5e2af5ef5ca2ef606964719dbb5abb58 498 Pfam PF13416 Bacterial extracellular solute-binding protein 60 327 1.2E-16 T 14-10-2018 IPR006059 Bacterial extracellular solute-binding protein GYO_3263 5e2af5ef5ca2ef606964719dbb5abb58 498 Gene3D G3DSA:3.40.190.10 155 495 2.6E-66 T 14-10-2018 GYO_3263 5e2af5ef5ca2ef606964719dbb5abb58 498 Gene3D G3DSA:3.40.190.10 61 411 2.6E-66 T 14-10-2018 GYO_3378 f7413bebaa7dcbd885b809e47985489a 173 SUPERFAMILY SSF55729 1 136 2.62E-21 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase GYO_3378 f7413bebaa7dcbd885b809e47985489a 173 Pfam PF00583 Acetyltransferase (GNAT) family 43 135 2.0E-11 T 14-10-2018 IPR000182 GNAT domain GYO_3378 f7413bebaa7dcbd885b809e47985489a 173 Gene3D G3DSA:3.40.630.30 3 164 1.0E-33 T 14-10-2018 GYO_3993 e49436f4f2bce4b8cc50a3a96ec16b48 258 Pfam PF08220 DeoR-like helix-turn-helix domain 6 59 3.6E-17 T 14-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 GYO_3993 e49436f4f2bce4b8cc50a3a96ec16b48 258 SMART SM01134 73 232 1.1E-71 T 14-10-2018 GYO_3993 e49436f4f2bce4b8cc50a3a96ec16b48 258 SUPERFAMILY SSF46785 4 77 2.53E-14 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily GYO_3993 e49436f4f2bce4b8cc50a3a96ec16b48 258 Gene3D G3DSA:1.10.10.10 1 58 1.0E-6 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily GYO_3993 e49436f4f2bce4b8cc50a3a96ec16b48 258 SUPERFAMILY SSF100950 75 233 1.85E-29 T 14-10-2018 IPR037171 NagB/RpiA transferase-like GYO_3993 e49436f4f2bce4b8cc50a3a96ec16b48 258 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 38 56 8.2E-6 T 14-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 GYO_3993 e49436f4f2bce4b8cc50a3a96ec16b48 258 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 24 38 8.2E-6 T 14-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 GYO_3993 e49436f4f2bce4b8cc50a3a96ec16b48 258 Pfam PF00455 DeoR C terminal sensor domain 76 231 1.5E-53 T 14-10-2018 IPR014036 DeoR C-terminal sensor domain GYO_3993 e49436f4f2bce4b8cc50a3a96ec16b48 258 ProSitePatterns PS00894 DeoR-type HTH domain signature. 6 40 - T 14-10-2018 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 GYO_3993 e49436f4f2bce4b8cc50a3a96ec16b48 258 SMART SM00420 6 58 1.3E-15 T 14-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 GYO_1935 612410fa102fcd0f27d450efe6ad0cea 220 TIGRFAM TIGR00719 sda_beta: L-serine dehydratase, iron-sulfur-dependent, beta subunit 1 206 4.4E-115 T 14-10-2018 IPR004643 Iron-sulphur-dependent L-serine dehydratase beta subunit GO:0003941|GO:0006094 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17 GYO_1935 612410fa102fcd0f27d450efe6ad0cea 220 Gene3D G3DSA:3.30.70.260 139 217 7.0E-14 T 14-10-2018 GYO_1935 612410fa102fcd0f27d450efe6ad0cea 220 PIRSF PIRSF036692 1 220 1.7E-104 T 14-10-2018 IPR004643 Iron-sulphur-dependent L-serine dehydratase beta subunit GO:0003941|GO:0006094 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17 GYO_1935 612410fa102fcd0f27d450efe6ad0cea 220 SUPERFAMILY SSF143548 19 137 1.96E-32 T 14-10-2018 IPR029009 Allosteric substrate binding domain superfamily Reactome: R-HSA-977347 GYO_1935 612410fa102fcd0f27d450efe6ad0cea 220 Pfam PF01842 ACT domain 149 210 1.4E-9 T 14-10-2018 IPR002912 ACT domain GYO_1935 612410fa102fcd0f27d450efe6ad0cea 220 SUPERFAMILY SSF55021 137 217 4.96E-16 T 14-10-2018 GYO_1935 612410fa102fcd0f27d450efe6ad0cea 220 Pfam PF03315 Serine dehydratase beta chain 5 73 1.8E-11 T 14-10-2018 IPR005131 Serine dehydratase beta chain GO:0003941|GO:0006094|GO:0051539 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17 GYO_1935 612410fa102fcd0f27d450efe6ad0cea 220 Gene3D G3DSA:3.30.1330.90 13 136 8.3E-22 T 14-10-2018 IPR029009 Allosteric substrate binding domain superfamily Reactome: R-HSA-977347 GYO_1080 188bf436320cb75656f6506696a135f4 59 Hamap MF_00667 Small, acid-soluble spore protein H [sspH]. 1 59 20.834 T 14-10-2018 IPR012610 Small acid-soluble spore protein, SspH GO:0030436|GO:0042601 GYO_1080 188bf436320cb75656f6506696a135f4 59 Pfam PF08141 Small acid-soluble spore protein H family 1 58 5.9E-27 T 14-10-2018 IPR012610 Small acid-soluble spore protein, SspH GO:0030436|GO:0042601 GYO_1080 188bf436320cb75656f6506696a135f4 59 TIGRFAM TIGR02861 SASP_H: small acid-soluble spore protein, H-type 1 58 6.1E-29 T 14-10-2018 IPR012610 Small acid-soluble spore protein, SspH GO:0030436|GO:0042601 GYO_1080 188bf436320cb75656f6506696a135f4 59 ProDom PD052450 H SPORE ACID-SOLUBLE SMALL SASP SPORULATION SMALL PROTEIN-RELATED SOLUBLE RBL04815 1 58 3.0E-24 T 14-10-2018 IPR012610 Small acid-soluble spore protein, SspH GO:0030436|GO:0042601 GYO_1174 b84a2171348f35487b0f9933ff565633 89 ProSitePatterns PS00527 Ribosomal protein S14 signature. 51 73 - T 14-10-2018 IPR018271 Ribosomal protein S14, conserved site GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 GYO_1174 b84a2171348f35487b0f9933ff565633 89 SUPERFAMILY SSF57716 2 89 2.85E-33 T 14-10-2018 GYO_1174 b84a2171348f35487b0f9933ff565633 89 Pfam PF00253 Ribosomal protein S14p/S29e 36 88 1.1E-29 T 14-10-2018 IPR001209 Ribosomal protein S14 GO:0003735|GO:0005622|GO:0005840|GO:0006412 GYO_1174 b84a2171348f35487b0f9933ff565633 89 Gene3D G3DSA:4.10.830.10 28 89 2.3E-26 T 14-10-2018 GYO_1174 b84a2171348f35487b0f9933ff565633 89 Hamap MF_00537 30S ribosomal protein S14 [rpsN]. 1 89 25.327 T 14-10-2018 IPR023036 Ribosomal protein S14, bacterial/plastid GYO_1532 2b4531eda0d2456236938e72b0ae6a46 250 TIGRFAM TIGR00245 TIGR00245: TIGR00245 family protein 1 246 3.0E-110 T 14-10-2018 IPR005226 UPF0014 family GYO_1532 2b4531eda0d2456236938e72b0ae6a46 250 Pfam PF03649 Uncharacterised protein family (UPF0014) 4 240 5.2E-75 T 14-10-2018 IPR005226 UPF0014 family GYO_3815 c8c4a2dde61e203aa22be9912a5eb6d3 316 Gene3D G3DSA:3.50.50.60 8 301 9.9E-117 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily GYO_3815 c8c4a2dde61e203aa22be9912a5eb6d3 316 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 7 294 9.5E-53 T 14-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 GYO_3815 c8c4a2dde61e203aa22be9912a5eb6d3 316 TIGRFAM TIGR01292 TRX_reduct: thioredoxin-disulfide reductase 7 305 8.4E-124 T 14-10-2018 IPR005982 Thioredoxin reductase GO:0004791|GO:0005737|GO:0019430|GO:0055114 KEGG: 00450+1.8.1.9 GYO_3815 c8c4a2dde61e203aa22be9912a5eb6d3 316 ProSitePatterns PS00573 Pyridine nucleotide-disulphide oxidoreductases class-II active site. 135 155 - T 14-10-2018 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site GO:0016491|GO:0055114 GYO_3815 c8c4a2dde61e203aa22be9912a5eb6d3 316 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 105 123 6.7E-37 T 14-10-2018 GYO_3815 c8c4a2dde61e203aa22be9912a5eb6d3 316 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 9 28 6.7E-37 T 14-10-2018 GYO_3815 c8c4a2dde61e203aa22be9912a5eb6d3 316 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 147 165 6.7E-37 T 14-10-2018 GYO_3815 c8c4a2dde61e203aa22be9912a5eb6d3 316 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 232 248 6.7E-37 T 14-10-2018 GYO_3815 c8c4a2dde61e203aa22be9912a5eb6d3 316 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 258 280 6.7E-37 T 14-10-2018 GYO_3815 c8c4a2dde61e203aa22be9912a5eb6d3 316 Gene3D G3DSA:3.50.50.60 117 240 9.9E-117 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily GYO_3815 c8c4a2dde61e203aa22be9912a5eb6d3 316 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 106 114 6.7E-73 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 GYO_3815 c8c4a2dde61e203aa22be9912a5eb6d3 316 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 8 30 6.7E-73 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 GYO_3815 c8c4a2dde61e203aa22be9912a5eb6d3 316 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 268 286 6.7E-73 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 GYO_3815 c8c4a2dde61e203aa22be9912a5eb6d3 316 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 143 167 6.7E-73 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 GYO_3815 c8c4a2dde61e203aa22be9912a5eb6d3 316 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 41 56 6.7E-73 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 GYO_3815 c8c4a2dde61e203aa22be9912a5eb6d3 316 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 195 211 6.7E-73 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 GYO_3815 c8c4a2dde61e203aa22be9912a5eb6d3 316 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 234 255 6.7E-73 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 GYO_3815 c8c4a2dde61e203aa22be9912a5eb6d3 316 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 61 71 6.7E-73 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 GYO_3815 c8c4a2dde61e203aa22be9912a5eb6d3 316 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 128 140 6.7E-73 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 GYO_3815 c8c4a2dde61e203aa22be9912a5eb6d3 316 SUPERFAMILY SSF51905 4 302 2.16E-58 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily GYO_4499 76506c4b401db19f834d1f6666c143c6 185 Pfam PF12464 Maltose acetyltransferase 8 58 1.3E-16 T 14-10-2018 IPR024688 Maltose/galactoside acetyltransferase GO:0016407 GYO_4499 76506c4b401db19f834d1f6666c143c6 185 SMART SM01266 6 59 2.0E-19 T 14-10-2018 IPR024688 Maltose/galactoside acetyltransferase GO:0016407 GYO_4499 76506c4b401db19f834d1f6666c143c6 185 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 139 167 - T 14-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 GYO_4499 76506c4b401db19f834d1f6666c143c6 185 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 130 165 6.0E-12 T 14-10-2018 IPR001451 Hexapeptide repeat GYO_4499 76506c4b401db19f834d1f6666c143c6 185 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 75 110 0.014 T 14-10-2018 IPR001451 Hexapeptide repeat GYO_4499 76506c4b401db19f834d1f6666c143c6 185 Gene3D G3DSA:2.160.10.10 1 185 2.1E-74 T 14-10-2018 GYO_4499 76506c4b401db19f834d1f6666c143c6 185 SUPERFAMILY SSF51161 3 184 1.11E-57 T 14-10-2018 IPR011004 Trimeric LpxA-like superfamily GYO_4135 ca4e6d883d045dfea015c9a60a0c1a9f 691 Pfam PF00912 Transglycosylase 63 237 2.2E-63 T 14-10-2018 IPR001264 Glycosyl transferase, family 51 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 GYO_4135 ca4e6d883d045dfea015c9a60a0c1a9f 691 Pfam PF00905 Penicillin binding protein transpeptidase domain 330 603 4.6E-29 T 14-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 GYO_4135 ca4e6d883d045dfea015c9a60a0c1a9f 691 TIGRFAM TIGR02074 PBP_1a_fam: penicillin-binding protein, 1A family 73 609 1.0E-173 T 14-10-2018 GYO_4135 ca4e6d883d045dfea015c9a60a0c1a9f 691 SUPERFAMILY SSF53955 50 263 8.15E-75 T 14-10-2018 IPR023346 Lysozyme-like domain superfamily GYO_4135 ca4e6d883d045dfea015c9a60a0c1a9f 691 SUPERFAMILY SSF56601 219 661 5.63E-111 T 14-10-2018 IPR012338 Beta-lactamase/transpeptidase-like GYO_4135 ca4e6d883d045dfea015c9a60a0c1a9f 691 Gene3D G3DSA:3.40.710.10 261 667 2.6E-111 T 14-10-2018 GYO_4135 ca4e6d883d045dfea015c9a60a0c1a9f 691 Gene3D G3DSA:1.10.3810.10 64 260 6.9E-76 T 14-10-2018 IPR036950 Penicillin binding protein transglycosylase domain KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 GYO_0324 cf96df0b9e9ae5dd97878ef0d54f9710 192 Pfam PF10076 Uncharacterised protein conserved in bacteria (DUF2313) 5 148 1.7E-32 T 14-10-2018 IPR018755 Bacteriophage Mu-like, Gp48 GYO_0245 cf96df0b9e9ae5dd97878ef0d54f9710 192 Pfam PF10076 Uncharacterised protein conserved in bacteria (DUF2313) 5 148 1.7E-32 T 14-10-2018 IPR018755 Bacteriophage Mu-like, Gp48 GYO_1468 8affb007ab82a475e8c683cd033bff87 244 Gene3D G3DSA:3.60.21.10 1 241 4.1E-60 T 14-10-2018 IPR029052 Metallo-dependent phosphatase-like GYO_1468 8affb007ab82a475e8c683cd033bff87 244 Hamap MF_01443 Bis(5'-nucleosyl)-tetraphosphatase PrpE [asymmetrical] [prpE]. 1 244 61.758 T 14-10-2018 IPR023937 Bis(5'-nucleosyl)-tetraphosphatase PrpE GO:0004081|GO:0016151 KEGG: 00230+3.6.1.17|KEGG: 00240+3.6.1.17 GYO_1468 8affb007ab82a475e8c683cd033bff87 244 Pfam PF00149 Calcineurin-like phosphoesterase 5 194 1.9E-13 T 14-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 GYO_1468 8affb007ab82a475e8c683cd033bff87 244 SUPERFAMILY SSF56300 1 223 7.91E-39 T 14-10-2018 GYO_2696 833cffeff88e9c18aaa1591dc0cdc0df 218 Pfam PF12685 SpoIIIAH-like protein 5 207 4.8E-43 T 14-10-2018 IPR024232 Stage III sporulation protein AH-like GYO_2696 833cffeff88e9c18aaa1591dc0cdc0df 218 Gene3D G3DSA:3.30.300.270 103 218 2.8E-41 T 14-10-2018 IPR038503 Stage III sporulation protein AH-like superfamily GYO_0184 71a70f59e5dfb914d9520b33b14a7ad1 254 Pfam PF01522 Polysaccharide deacetylase 52 175 4.3E-27 T 14-10-2018 IPR002509 NodB homology domain GO:0005975|GO:0016810 GYO_0184 71a70f59e5dfb914d9520b33b14a7ad1 254 Gene3D G3DSA:3.20.20.370 47 254 1.3E-59 T 14-10-2018 GYO_0184 71a70f59e5dfb914d9520b33b14a7ad1 254 SUPERFAMILY SSF88713 25 243 1.66E-54 T 14-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 GYO_0184 71a70f59e5dfb914d9520b33b14a7ad1 254 TIGRFAM TIGR02764 spore_ybaN_pdaB: polysaccharide deacetylase family sporulation protein PdaB 53 243 5.2E-86 T 14-10-2018 IPR014132 Sporulation polysaccharide deacetylase, PdaB GYO_3836 6a934f7dc55f0e83ef23b897397dba48 269 ProSitePatterns PS01311 Prolipoprotein diacylglyceryl transferase signature. 136 148 - T 14-10-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0016020|GO:0016757|GO:0042158 GYO_3836 6a934f7dc55f0e83ef23b897397dba48 269 Pfam PF01790 Prolipoprotein diacylglyceryl transferase 10 255 4.8E-80 T 14-10-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0016020|GO:0016757|GO:0042158 GYO_3836 6a934f7dc55f0e83ef23b897397dba48 269 TIGRFAM TIGR00544 lgt: prolipoprotein diacylglyceryl transferase 1 265 8.5E-99 T 14-10-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0016020|GO:0016757|GO:0042158 GYO_3836 6a934f7dc55f0e83ef23b897397dba48 269 Hamap MF_01147 Prolipoprotein diacylglyceryl transferase [lgt]. 7 261 18.504 T 14-10-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0016020|GO:0016757|GO:0042158 GYO_1206 10c89a289c5a8a731047da18326ecee7 1195 Pfam PF00149 Calcineurin-like phosphoesterase 569 806 5.9E-12 T 14-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 GYO_1206 10c89a289c5a8a731047da18326ecee7 1195 Gene3D G3DSA:2.40.50.90 353 499 9.6E-34 T 14-10-2018 IPR035437 SNase-like, OB-fold superfamily GYO_1206 10c89a289c5a8a731047da18326ecee7 1195 Gene3D G3DSA:3.90.780.10 881 1062 2.5E-41 T 14-10-2018 IPR036907 5'-Nucleotidase, C-terminal domain superfamily GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 GYO_1206 10c89a289c5a8a731047da18326ecee7 1195 SUPERFAMILY SSF50199 354 499 2.22E-29 T 14-10-2018 GYO_1206 10c89a289c5a8a731047da18326ecee7 1195 ProSitePatterns PS00786 5'-nucleotidase signature 2. 652 663 - T 14-10-2018 IPR006146 5'-Nucleotidase, conserved site GO:0000166|GO:0016788|GO:0046872 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 GYO_1206 10c89a289c5a8a731047da18326ecee7 1195 PRINTS PR01607 Apyrase family signature 789 812 2.0E-24 T 14-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 GYO_1206 10c89a289c5a8a731047da18326ecee7 1195 PRINTS PR01607 Apyrase family signature 761 778 2.0E-24 T 14-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 GYO_1206 10c89a289c5a8a731047da18326ecee7 1195 PRINTS PR01607 Apyrase family signature 815 835 2.0E-24 T 14-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 GYO_1206 10c89a289c5a8a731047da18326ecee7 1195 PRINTS PR01607 Apyrase family signature 932 955 2.0E-24 T 14-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 GYO_1206 10c89a289c5a8a731047da18326ecee7 1195 PRINTS PR01607 Apyrase family signature 1000 1019 2.0E-24 T 14-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 GYO_1206 10c89a289c5a8a731047da18326ecee7 1195 PRINTS PR01607 Apyrase family signature 567 585 2.0E-24 T 14-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 GYO_1206 10c89a289c5a8a731047da18326ecee7 1195 SMART SM00318 355 496 3.2E-47 T 14-10-2018 IPR016071 Staphylococcal nuclease (SNase-like), OB-fold Reactome: R-HSA-6802952 GYO_1206 10c89a289c5a8a731047da18326ecee7 1195 SUPERFAMILY SSF55816 877 1064 1.03E-41 T 14-10-2018 IPR036907 5'-Nucleotidase, C-terminal domain superfamily GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 GYO_1206 10c89a289c5a8a731047da18326ecee7 1195 SUPERFAMILY SSF56300 563 878 2.16E-74 T 14-10-2018 GYO_1206 10c89a289c5a8a731047da18326ecee7 1195 Gene3D G3DSA:3.60.21.10 566 879 4.8E-80 T 14-10-2018 IPR029052 Metallo-dependent phosphatase-like GYO_1206 10c89a289c5a8a731047da18326ecee7 1195 SUPERFAMILY SSF50249 255 335 6.85E-5 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold GYO_1206 10c89a289c5a8a731047da18326ecee7 1195 Pfam PF00746 LPXTG cell wall anchor motif 1156 1191 9.9E-6 T 14-10-2018 IPR019948 Gram-positive LPXTG cell wall anchor GYO_1206 10c89a289c5a8a731047da18326ecee7 1195 TIGRFAM TIGR01167 LPXTG_anchor: LPXTG cell wall anchor domain 1159 1190 0.0019 T 14-10-2018 GYO_1206 10c89a289c5a8a731047da18326ecee7 1195 Pfam PF00565 Staphylococcal nuclease homologue 381 496 2.2E-28 T 14-10-2018 IPR016071 Staphylococcal nuclease (SNase-like), OB-fold Reactome: R-HSA-6802952 GYO_1206 10c89a289c5a8a731047da18326ecee7 1195 Pfam PF02872 5'-nucleotidase, C-terminal domain 880 1020 5.1E-32 T 14-10-2018 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 GYO_4010 b168b4c1b7cd37887695d819a0ad48cb 468 Pfam PF13229 Right handed beta helix region 148 336 1.8E-13 T 14-10-2018 IPR039448 Right handed beta helix domain GYO_4010 b168b4c1b7cd37887695d819a0ad48cb 468 SMART SM00710 189 214 1500.0 T 14-10-2018 IPR006626 Parallel beta-helix repeat GYO_4010 b168b4c1b7cd37887695d819a0ad48cb 468 SMART SM00710 312 334 0.82 T 14-10-2018 IPR006626 Parallel beta-helix repeat GYO_4010 b168b4c1b7cd37887695d819a0ad48cb 468 SMART SM00710 156 185 28.0 T 14-10-2018 IPR006626 Parallel beta-helix repeat GYO_4010 b168b4c1b7cd37887695d819a0ad48cb 468 SMART SM00710 125 154 8500.0 T 14-10-2018 IPR006626 Parallel beta-helix repeat GYO_4010 b168b4c1b7cd37887695d819a0ad48cb 468 SMART SM00710 216 238 530.0 T 14-10-2018 IPR006626 Parallel beta-helix repeat GYO_4010 b168b4c1b7cd37887695d819a0ad48cb 468 SMART SM00710 284 305 170.0 T 14-10-2018 IPR006626 Parallel beta-helix repeat GYO_4010 b168b4c1b7cd37887695d819a0ad48cb 468 SMART SM00710 397 420 1300.0 T 14-10-2018 IPR006626 Parallel beta-helix repeat GYO_4010 b168b4c1b7cd37887695d819a0ad48cb 468 SMART SM00710 371 396 9700.0 T 14-10-2018 IPR006626 Parallel beta-helix repeat GYO_4010 b168b4c1b7cd37887695d819a0ad48cb 468 SMART SM00710 249 283 2.6 T 14-10-2018 IPR006626 Parallel beta-helix repeat GYO_4010 b168b4c1b7cd37887695d819a0ad48cb 468 SUPERFAMILY SSF51126 49 445 2.43E-64 T 14-10-2018 IPR011050 Pectin lyase fold/virulence factor GYO_4010 b168b4c1b7cd37887695d819a0ad48cb 468 SMART SM00722 72 237 1.6E-10 T 14-10-2018 IPR006633 Carbohydrate-binding/sugar hydrolysis domain GYO_4010 b168b4c1b7cd37887695d819a0ad48cb 468 Gene3D G3DSA:2.160.20.10 36 339 2.5E-60 T 14-10-2018 IPR012334 Pectin lyase fold GYO_0520 72ba56d42e8692b593757cfdd2c7be96 186 Gene3D G3DSA:3.40.50.300 9 180 3.2E-44 T 14-10-2018 GYO_0520 72ba56d42e8692b593757cfdd2c7be96 186 Pfam PF01202 Shikimate kinase 20 177 6.4E-45 T 14-10-2018 IPR031322 Shikimate kinase/gluconokinase KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 GYO_0520 72ba56d42e8692b593757cfdd2c7be96 186 PRINTS PR01100 Shikimate kinase family signature 66 74 1.0E-14 T 14-10-2018 GYO_0520 72ba56d42e8692b593757cfdd2c7be96 186 PRINTS PR01100 Shikimate kinase family signature 85 94 1.0E-14 T 14-10-2018 GYO_0520 72ba56d42e8692b593757cfdd2c7be96 186 PRINTS PR01100 Shikimate kinase family signature 38 51 1.0E-14 T 14-10-2018 GYO_0520 72ba56d42e8692b593757cfdd2c7be96 186 PRINTS PR01100 Shikimate kinase family signature 14 29 1.0E-14 T 14-10-2018 GYO_0520 72ba56d42e8692b593757cfdd2c7be96 186 SUPERFAMILY SSF52540 12 176 9.85E-24 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase GYO_0520 72ba56d42e8692b593757cfdd2c7be96 186 Hamap MF_00109 Shikimate kinase [aroK]. 11 177 24.154 T 14-10-2018 IPR000623 Shikimate kinase/Threonine synthase-like 1 KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 GYO_0520 72ba56d42e8692b593757cfdd2c7be96 186 ProSitePatterns PS01128 Shikimate kinase signature. 67 93 - T 14-10-2018 IPR023000 Shikimate kinase, conserved site KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 GYO_0466 2ee77f30921a263b9b366b20a5eaa405 215 Hamap MF_00417 Pyrrolidone-carboxylate peptidase [pcp]. 3 199 43.427 T 14-10-2018 IPR029762 Pyroglutamyl peptidase I, bacterial-type GO:0005829|GO:0006508|GO:0008234|GO:0016920 MetaCyc: PWY-7942 GYO_0466 2ee77f30921a263b9b366b20a5eaa405 215 ProSitePatterns PS01333 Pyrrolidone-carboxylate peptidase glutamic acid active site. 70 86 - T 14-10-2018 IPR033693 Pyroglutamyl peptidase I, Glu active site MetaCyc: PWY-7942 GYO_0466 2ee77f30921a263b9b366b20a5eaa405 215 TIGRFAM TIGR00504 pyro_pdase: pyroglutamyl-peptidase I 4 215 5.9E-107 T 14-10-2018 IPR029762 Pyroglutamyl peptidase I, bacterial-type GO:0005829|GO:0006508|GO:0008234|GO:0016920 MetaCyc: PWY-7942 GYO_0466 2ee77f30921a263b9b366b20a5eaa405 215 PIRSF PIRSF015592 2 213 1.7E-85 T 14-10-2018 IPR000816 Peptidase C15, pyroglutamyl peptidase I GO:0005829|GO:0006508|GO:0016920 MetaCyc: PWY-7942 GYO_0466 2ee77f30921a263b9b366b20a5eaa405 215 PRINTS PR00706 Pyroglutamyl peptidase I (C15) family signature 5 28 4.9E-51 T 14-10-2018 IPR000816 Peptidase C15, pyroglutamyl peptidase I GO:0005829|GO:0006508|GO:0016920 MetaCyc: PWY-7942 GYO_0466 2ee77f30921a263b9b366b20a5eaa405 215 PRINTS PR00706 Pyroglutamyl peptidase I (C15) family signature 63 75 4.9E-51 T 14-10-2018 IPR000816 Peptidase C15, pyroglutamyl peptidase I GO:0005829|GO:0006508|GO:0016920 MetaCyc: PWY-7942 GYO_0466 2ee77f30921a263b9b366b20a5eaa405 215 PRINTS PR00706 Pyroglutamyl peptidase I (C15) family signature 163 175 4.9E-51 T 14-10-2018 IPR000816 Peptidase C15, pyroglutamyl peptidase I GO:0005829|GO:0006508|GO:0016920 MetaCyc: PWY-7942 GYO_0466 2ee77f30921a263b9b366b20a5eaa405 215 PRINTS PR00706 Pyroglutamyl peptidase I (C15) family signature 81 101 4.9E-51 T 14-10-2018 IPR000816 Peptidase C15, pyroglutamyl peptidase I GO:0005829|GO:0006508|GO:0016920 MetaCyc: PWY-7942 GYO_0466 2ee77f30921a263b9b366b20a5eaa405 215 PRINTS PR00706 Pyroglutamyl peptidase I (C15) family signature 133 149 4.9E-51 T 14-10-2018 IPR000816 Peptidase C15, pyroglutamyl peptidase I GO:0005829|GO:0006508|GO:0016920 MetaCyc: PWY-7942 GYO_0466 2ee77f30921a263b9b366b20a5eaa405 215 ProSitePatterns PS01334 Pyrrolidone-carboxylate peptidase cysteine active site. 131 145 - T 14-10-2018 IPR033694 Pyroglutamyl peptidase I, Cys active site MetaCyc: PWY-7942 GYO_0466 2ee77f30921a263b9b366b20a5eaa405 215 Gene3D G3DSA:3.40.630.20 1 215 1.3E-88 T 14-10-2018 IPR036440 Peptidase C15, pyroglutamyl peptidase I-like superfamily MetaCyc: PWY-7942 GYO_0466 2ee77f30921a263b9b366b20a5eaa405 215 Pfam PF01470 Pyroglutamyl peptidase 3 203 1.7E-94 T 14-10-2018 IPR016125 Peptidase C15, pyroglutamyl peptidase I-like MetaCyc: PWY-7942 GYO_0466 2ee77f30921a263b9b366b20a5eaa405 215 SUPERFAMILY SSF53182 3 214 7.98E-75 T 14-10-2018 IPR036440 Peptidase C15, pyroglutamyl peptidase I-like superfamily MetaCyc: PWY-7942 GYO_3200 5700c621e057e2d9c8b2d8b6fc94a514 267 Gene3D G3DSA:2.60.200.30 109 245 1.2E-77 T 14-10-2018 IPR017437 ATP-NAD kinase, PpnK-type, C-terminal GO:0003951|GO:0019674 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269|Reactome: R-HSA-196807 GYO_3200 5700c621e057e2d9c8b2d8b6fc94a514 267 Pfam PF01513 ATP-NAD kinase 13 252 3.3E-15 T 14-10-2018 IPR002504 NAD kinase GO:0003951|GO:0006741 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269|Reactome: R-HSA-196807 GYO_3200 5700c621e057e2d9c8b2d8b6fc94a514 267 Gene3D G3DSA:3.40.50.10330 34 267 1.2E-77 T 14-10-2018 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, N-terminal GO:0003951 GYO_3200 5700c621e057e2d9c8b2d8b6fc94a514 267 SUPERFAMILY SSF111331 10 266 4.97E-59 T 14-10-2018 IPR016064 NAD kinase/diacylglycerol kinase-like domain superfamily GYO_3200 5700c621e057e2d9c8b2d8b6fc94a514 267 Hamap MF_00361 NAD kinase [nadK]. 6 267 21.283 T 14-10-2018 IPR002504 NAD kinase GO:0003951|GO:0006741 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269|Reactome: R-HSA-196807 GYO_4425 1fb1987465a28fe51a716fdca6af29b9 319 TIGRFAM TIGR04078 rSAM_yydG: peptide modification radical SAM enzyme, YydG family 4 313 1.6E-166 T 14-10-2018 IPR023904 Peptide radical SAM maturase , YydG GYO_4425 1fb1987465a28fe51a716fdca6af29b9 319 Pfam PF04055 Radical SAM superfamily 13 122 2.1E-8 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 GYO_4425 1fb1987465a28fe51a716fdca6af29b9 319 SUPERFAMILY SSF102114 5 226 1.96E-15 T 14-10-2018 GYO_4425 1fb1987465a28fe51a716fdca6af29b9 319 Pfam PF13394 4Fe-4S single cluster domain 12 111 4.7E-7 T 14-10-2018 GYO_0055 4de18d19410ed27d145ab9c7244fa9e0 292 Pfam PF00288 GHMP kinases N terminal domain 90 147 1.4E-12 T 14-10-2018 IPR006204 GHMP kinase N-terminal domain GO:0005524 GYO_0055 4de18d19410ed27d145ab9c7244fa9e0 292 Pfam PF08544 GHMP kinases C terminal 200 273 4.2E-9 T 14-10-2018 IPR013750 GHMP kinase, C-terminal domain GYO_0055 4de18d19410ed27d145ab9c7244fa9e0 292 SUPERFAMILY SSF54211 5 160 9.11E-48 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold GYO_0055 4de18d19410ed27d145ab9c7244fa9e0 292 Gene3D G3DSA:3.30.70.890 165 290 1.1E-28 T 14-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily GYO_0055 4de18d19410ed27d145ab9c7244fa9e0 292 Hamap MF_00061 Putative 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [ispE]. 6 282 35.722 T 14-10-2018 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560 GYO_0055 4de18d19410ed27d145ab9c7244fa9e0 292 Gene3D G3DSA:3.30.230.10 1 162 3.6E-61 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup GYO_0055 4de18d19410ed27d145ab9c7244fa9e0 292 PIRSF PIRSF010376 4 291 7.9E-100 T 14-10-2018 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560 GYO_0055 4de18d19410ed27d145ab9c7244fa9e0 292 SUPERFAMILY SSF55060 164 284 1.29E-30 T 14-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily GYO_0055 4de18d19410ed27d145ab9c7244fa9e0 292 TIGRFAM TIGR00154 ispE: 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase 4 290 6.3E-126 T 14-10-2018 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560 GYO_1226 15ab3c54b7c7ee38860533a6788fab27 146 Pfam PF02082 Transcriptional regulator 1 82 1.2E-24 T 14-10-2018 IPR000944 Transcription regulator Rrf2-type GYO_1226 15ab3c54b7c7ee38860533a6788fab27 146 ProSitePatterns PS01332 Rrf2-type HTH domain signature. 49 67 - T 14-10-2018 IPR030489 Transcription regulator Rrf2-type, conserved site GYO_1226 15ab3c54b7c7ee38860533a6788fab27 146 Gene3D G3DSA:1.10.10.10 1 142 3.1E-37 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily GYO_1226 15ab3c54b7c7ee38860533a6788fab27 146 TIGRFAM TIGR00738 rrf2_super: Rrf2 family protein 1 133 3.4E-41 T 14-10-2018 IPR000944 Transcription regulator Rrf2-type GYO_1226 15ab3c54b7c7ee38860533a6788fab27 146 SUPERFAMILY SSF46785 2 135 1.39E-36 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily GYO_1763 3e141baa3e4184cc5f5b3600bb44f156 339 Gene3D G3DSA:3.40.50.720 2 250 1.4E-76 T 14-10-2018 GYO_1763 3e141baa3e4184cc5f5b3600bb44f156 339 Pfam PF00899 ThiF family 5 240 2.5E-59 T 14-10-2018 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 GYO_1763 3e141baa3e4184cc5f5b3600bb44f156 339 SUPERFAMILY SSF69572 2 328 4.32E-86 T 14-10-2018 IPR035985 Ubiquitin-activating enzyme GO:0008641 GYO_4413 0bfb0b3363ec6c40ba4bd29e9f0d83f8 187 TIGRFAM TIGR03137 AhpC: peroxiredoxin 1 187 4.7E-102 T 14-10-2018 IPR017559 Alkyl hydroperoxide reductase subunit C GO:0006979|GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 GYO_4413 0bfb0b3363ec6c40ba4bd29e9f0d83f8 187 Pfam PF10417 C-terminal domain of 1-Cys peroxiredoxin 156 182 1.8E-4 T 14-10-2018 IPR019479 Peroxiredoxin, C-terminal GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 GYO_4413 0bfb0b3363ec6c40ba4bd29e9f0d83f8 187 Pfam PF00578 AhpC/TSA family 4 133 2.1E-32 T 14-10-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 GYO_4413 0bfb0b3363ec6c40ba4bd29e9f0d83f8 187 Gene3D G3DSA:3.40.30.10 1 186 1.7E-57 T 14-10-2018 GYO_4413 0bfb0b3363ec6c40ba4bd29e9f0d83f8 187 SUPERFAMILY SSF52833 1 187 2.43E-53 T 14-10-2018 IPR036249 Thioredoxin-like superfamily GYO_4413 0bfb0b3363ec6c40ba4bd29e9f0d83f8 187 PIRSF PIRSF000239 1 187 5.0E-49 T 14-10-2018 IPR024706 Peroxiredoxin, AhpC-type KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 GYO_0154 2abe3b8096de108b5a8feb8a45426c8b 179 SUPERFAMILY SSF55282 3 178 4.47E-80 T 14-10-2018 IPR022803 Ribosomal protein L5 domain superfamily Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 GYO_0154 2abe3b8096de108b5a8feb8a45426c8b 179 Gene3D G3DSA:3.30.1440.10 1 179 5.3E-85 T 14-10-2018 IPR022803 Ribosomal protein L5 domain superfamily Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 GYO_0154 2abe3b8096de108b5a8feb8a45426c8b 179 PIRSF PIRSF002161 1 179 3.4E-70 T 14-10-2018 IPR002132 Ribosomal protein L5 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 GYO_0154 2abe3b8096de108b5a8feb8a45426c8b 179 Pfam PF00673 ribosomal L5P family C-terminus 84 177 1.0E-42 T 14-10-2018 IPR031309 Ribosomal protein L5, C-terminal Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 GYO_0154 2abe3b8096de108b5a8feb8a45426c8b 179 Pfam PF00281 Ribosomal protein L5 24 80 2.9E-28 T 14-10-2018 IPR031310 Ribosomal protein L5, N-terminal Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 GYO_0154 2abe3b8096de108b5a8feb8a45426c8b 179 Hamap MF_01333_B 50S ribosomal protein L5 [rplE]. 1 179 45.935 T 14-10-2018 IPR020930 Ribosomal protein L5, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 GYO_0154 2abe3b8096de108b5a8feb8a45426c8b 179 ProSitePatterns PS00358 Ribosomal protein L5 signature. 57 73 - T 14-10-2018 IPR020929 Ribosomal protein L5, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 GYO_2044 4af192c90bf2211f5eeb2e8a410af5a9 263 SUPERFAMILY SSF55021 6 71 4.58E-7 T 14-10-2018 GYO_2044 4af192c90bf2211f5eeb2e8a410af5a9 263 PIRSF PIRSF021288 1 262 4.0E-146 T 14-10-2018 IPR016784 Uncharacterised protein UCP021288 with ACT domain GYO_2044 4af192c90bf2211f5eeb2e8a410af5a9 263 Pfam PF11868 Protein of unknown function (DUF3388) 72 261 5.7E-106 T 14-10-2018 IPR024514 Domain of unknown function DUF3388 GYO_0467 1db99afd72a2c685f9d943d145caa94e 370 Pfam PF00266 Aminotransferase class-V 27 317 5.3E-42 T 14-10-2018 IPR000192 Aminotransferase class V domain GYO_0467 1db99afd72a2c685f9d943d145caa94e 370 Gene3D G3DSA:3.40.640.10 30 279 1.3E-80 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 GYO_0467 1db99afd72a2c685f9d943d145caa94e 370 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 198 218 - T 14-10-2018 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site GYO_0467 1db99afd72a2c685f9d943d145caa94e 370 SUPERFAMILY SSF53383 5 364 2.53E-68 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase GYO_0467 1db99afd72a2c685f9d943d145caa94e 370 Gene3D G3DSA:3.90.1150.10 17 358 1.3E-80 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 GYO_2234 ad5b42d0ae3b2f4b843bd82c14d582aa 333 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 3 315 9.3E-15 T 14-10-2018 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0016616|GO:0051287|GO:0055114 GYO_2234 ad5b42d0ae3b2f4b843bd82c14d582aa 333 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 113 291 7.5E-56 T 14-10-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 GYO_2234 ad5b42d0ae3b2f4b843bd82c14d582aa 333 SUPERFAMILY SSF52283 1 138 1.79E-22 T 14-10-2018 GYO_2234 ad5b42d0ae3b2f4b843bd82c14d582aa 333 ProSitePatterns PS00670 D-isomer specific 2-hydroxyacid dehydrogenases signature 2. 200 222 - T 14-10-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site GYO_2234 ad5b42d0ae3b2f4b843bd82c14d582aa 333 Gene3D G3DSA:3.40.50.720 3 316 1.9E-88 T 14-10-2018 GYO_2234 ad5b42d0ae3b2f4b843bd82c14d582aa 333 Gene3D G3DSA:3.40.50.720 101 291 1.9E-88 T 14-10-2018 GYO_2234 ad5b42d0ae3b2f4b843bd82c14d582aa 333 SUPERFAMILY SSF51735 106 291 1.23E-49 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily GYO_3609 54445a8c7c42463e4000040dac118218 462 TIGRFAM TIGR00979 fumC_II: fumarate hydratase, class II 3 459 1.1E-252 T 14-10-2018 IPR005677 Fumarate hydratase, class II GO:0004333|GO:0006106|GO:0045239 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|Reactome: R-HSA-71403 GYO_3609 54445a8c7c42463e4000040dac118218 462 ProSitePatterns PS00163 Fumarate lyases signature. 315 324 - T 14-10-2018 IPR020557 Fumarate lyase, conserved site GO:0003824 GYO_3609 54445a8c7c42463e4000040dac118218 462 Gene3D G3DSA:1.10.40.30 406 462 2.4E-28 T 14-10-2018 GYO_3609 54445a8c7c42463e4000040dac118218 462 PRINTS PR00145 Argininosuccinate lyase family signature 173 193 2.1E-5 T 14-10-2018 GYO_3609 54445a8c7c42463e4000040dac118218 462 PRINTS PR00145 Argininosuccinate lyase family signature 315 331 2.1E-5 T 14-10-2018 GYO_3609 54445a8c7c42463e4000040dac118218 462 PRINTS PR00149 Fumarate lyase superfamily signature 315 331 7.3E-34 T 14-10-2018 IPR000362 Fumarate lyase family GYO_3609 54445a8c7c42463e4000040dac118218 462 PRINTS PR00149 Fumarate lyase superfamily signature 178 196 7.3E-34 T 14-10-2018 IPR000362 Fumarate lyase family GYO_3609 54445a8c7c42463e4000040dac118218 462 PRINTS PR00149 Fumarate lyase superfamily signature 269 296 7.3E-34 T 14-10-2018 IPR000362 Fumarate lyase family GYO_3609 54445a8c7c42463e4000040dac118218 462 PRINTS PR00149 Fumarate lyase superfamily signature 132 150 7.3E-34 T 14-10-2018 IPR000362 Fumarate lyase family GYO_3609 54445a8c7c42463e4000040dac118218 462 SUPERFAMILY SSF48557 3 458 1.73E-156 T 14-10-2018 IPR008948 L-Aspartase-like GO:0003824 GYO_3609 54445a8c7c42463e4000040dac118218 462 Gene3D G3DSA:1.10.275.10 4 136 3.0E-55 T 14-10-2018 IPR024083 Fumarase/histidase, N-terminal GYO_3609 54445a8c7c42463e4000040dac118218 462 Pfam PF00206 Lyase 11 340 3.7E-121 T 14-10-2018 IPR022761 Fumarate lyase, N-terminal GYO_3609 54445a8c7c42463e4000040dac118218 462 Pfam PF10415 Fumarase C C-terminus 406 458 4.0E-26 T 14-10-2018 IPR018951 Fumarase C, C-terminal GO:0006099|GO:0016829 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|Reactome: R-HSA-71403 GYO_3609 54445a8c7c42463e4000040dac118218 462 Gene3D G3DSA:1.20.200.10 137 405 6.7E-115 T 14-10-2018 GYO_3609 54445a8c7c42463e4000040dac118218 462 Hamap MF_00743 Fumarate hydratase class II [fumC]. 3 460 89.833 T 14-10-2018 IPR005677 Fumarate hydratase, class II GO:0004333|GO:0006106|GO:0045239 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|Reactome: R-HSA-71403 GYO_3440 6e8a188435a08af6bb60e40e9b4f616a 185 ProDom PD108804 YUFK TRANSMEMBRANE MEMBRANE PRECURSOR SIGNAL 1 185 9.0E-77 T 14-10-2018 IPR035289 Protein of unknown function DUF5366 GYO_3440 6e8a188435a08af6bb60e40e9b4f616a 185 Pfam PF17328 Family of unknown function (DUF5366) 29 184 7.7E-63 T 14-10-2018 IPR035289 Protein of unknown function DUF5366 GYO_1570 be47640cf1457757d0ba3e0848203e31 433 Pfam PF04466 Phage terminase large subunit 19 231 6.4E-84 T 14-10-2018 IPR035412 Phage terminase large subunit, N-terminal GYO_1570 be47640cf1457757d0ba3e0848203e31 433 Gene3D G3DSA:3.40.50.300 5 232 9.3E-57 T 14-10-2018 GYO_1570 be47640cf1457757d0ba3e0848203e31 433 Pfam PF17288 Terminase RNAseH like domain 268 410 1.2E-49 T 14-10-2018 IPR035413 Phage terminase large subunit, C-terminal GYO_1570 be47640cf1457757d0ba3e0848203e31 433 TIGRFAM TIGR01547 phage_term_2: phage terminase, large subunit, PBSX family 19 420 1.1E-96 T 14-10-2018 IPR006437 Bacteriophage terminase, large subunit GO:0006323 GYO_1570 be47640cf1457757d0ba3e0848203e31 433 Gene3D G3DSA:3.30.420.280 250 415 6.9E-36 T 14-10-2018 GYO_3691 95087ba35285432c7a42d520925d3151 238 Gene3D G3DSA:3.40.50.300 1 237 3.9E-59 T 14-10-2018 GYO_3691 95087ba35285432c7a42d520925d3151 238 SUPERFAMILY SSF52540 5 215 1.33E-58 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase GYO_3691 95087ba35285432c7a42d520925d3151 238 Pfam PF00005 ABC transporter 22 158 5.3E-33 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 GYO_3691 95087ba35285432c7a42d520925d3151 238 TIGRFAM TIGR03740 galliderm_ABC: lantibiotic protection ABC transporter, ATP-binding subunit 6 228 6.6E-116 T 14-10-2018 IPR022501 Gallidermin ABC transporter, ATP-binding subunit GYO_3691 95087ba35285432c7a42d520925d3151 238 SMART SM00382 30 214 3.3E-12 T 14-10-2018 IPR003593 AAA+ ATPase domain GYO_2011 1ff13d58a9014c2aa84f44ed36779432 420 Gene3D G3DSA:2.30.42.10 200 288 2.3E-18 T 14-10-2018 GYO_2011 1ff13d58a9014c2aa84f44ed36779432 420 SUPERFAMILY SSF50156 173 267 1.29E-17 T 14-10-2018 IPR036034 PDZ superfamily GO:0005515 GYO_2011 1ff13d58a9014c2aa84f44ed36779432 420 SMART SM00228 188 258 0.0044 T 14-10-2018 IPR001478 PDZ domain GO:0005515 GYO_2011 1ff13d58a9014c2aa84f44ed36779432 420 TIGRFAM TIGR00054 TIGR00054: RIP metalloprotease RseP 2 419 2.2E-162 T 14-10-2018 IPR004387 Peptidase M50, putative membrane-associated zinc metallopeptidase GO:0004222|GO:0006508|GO:0016021 GYO_2011 1ff13d58a9014c2aa84f44ed36779432 420 Pfam PF02163 Peptidase family M50 6 406 4.3E-85 T 14-10-2018 IPR008915 Peptidase M50 GO:0004222|GO:0006508 Reactome: R-HSA-1655829|Reactome: R-HSA-381033|Reactome: R-HSA-8874211|Reactome: R-HSA-8963889 GYO_1257 e7bdebd4818bf6e3c81abcf4c425261f 282 SUPERFAMILY SSF88713 69 275 1.43E-50 T 14-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 GYO_1257 e7bdebd4818bf6e3c81abcf4c425261f 282 Gene3D G3DSA:3.20.20.370 43 279 7.8E-56 T 14-10-2018 GYO_1257 e7bdebd4818bf6e3c81abcf4c425261f 282 Pfam PF01522 Polysaccharide deacetylase 80 198 5.1E-29 T 14-10-2018 IPR002509 NodB homology domain GO:0005975|GO:0016810 GYO_0663 ae6267ef2dfaac92b8827e88d89de46a 350 Gene3D G3DSA:3.40.190.170 44 346 5.5E-95 T 14-10-2018 IPR038404 TRAP transporter solute receptor DctP superfamily GYO_0663 ae6267ef2dfaac92b8827e88d89de46a 350 Pfam PF03480 Bacterial extracellular solute-binding protein, family 7 49 331 9.9E-103 T 14-10-2018 IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0030288|GO:0055085 GYO_0663 ae6267ef2dfaac92b8827e88d89de46a 350 PIRSF PIRSF006470 15 349 5.8E-139 T 14-10-2018 IPR004682 TRAP transporter solute receptor, DctP family GO:0030288|GO:0055085 GYO_0663 ae6267ef2dfaac92b8827e88d89de46a 350 TIGRFAM TIGR00787 dctP: TRAP transporter solute receptor, DctP family 49 304 1.3E-105 T 14-10-2018 IPR004682 TRAP transporter solute receptor, DctP family GO:0030288|GO:0055085 GYO_2799 14d4369756aacb15fdf30aeffa9f03f5 688 Pfam PF07697 7TM-HD extracellular 31 247 3.0E-39 T 14-10-2018 IPR011624 Metal-dependent phosphohydrolase, 7TM extracellular domain GYO_2799 14d4369756aacb15fdf30aeffa9f03f5 688 Gene3D G3DSA:1.10.3210.10 451 646 1.8E-27 T 14-10-2018 GYO_2799 14d4369756aacb15fdf30aeffa9f03f5 688 Pfam PF07698 7TM receptor with intracellular HD hydrolase 254 453 3.7E-51 T 14-10-2018 IPR011621 Metal-dependent phosphohydrolase, 7TM intracellular domain GYO_2799 14d4369756aacb15fdf30aeffa9f03f5 688 Pfam PF01966 HD domain 478 619 1.9E-19 T 14-10-2018 IPR006674 HD domain GYO_2799 14d4369756aacb15fdf30aeffa9f03f5 688 TIGRFAM TIGR00277 HDIG: HDIG domain 475 573 8.9E-30 T 14-10-2018 IPR006675 HDIG domain GYO_2799 14d4369756aacb15fdf30aeffa9f03f5 688 SUPERFAMILY SSF109604 477 649 3.45E-15 T 14-10-2018 GYO_2799 14d4369756aacb15fdf30aeffa9f03f5 688 SMART SM00471 474 629 7.3E-12 T 14-10-2018 IPR003607 HD/PDEase domain GYO_2392 42e1f3507e8e8ea65edfdba07b28548c 177 TIGRFAM TIGR00401 msrA: peptide-methionine (S)-S-oxide reductase 6 157 9.1E-71 T 14-10-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 GYO_2392 42e1f3507e8e8ea65edfdba07b28548c 177 Hamap MF_01401 Peptide methionine sulfoxide reductase MsrA [msrA]. 5 164 36.832 T 14-10-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 GYO_2392 42e1f3507e8e8ea65edfdba07b28548c 177 SUPERFAMILY SSF55068 3 167 1.57E-72 T 14-10-2018 IPR036509 Peptide methionine sulphoxide reductase MsrA superfamily GO:0008113|GO:0055114 Reactome: R-HSA-5676934 GYO_2392 42e1f3507e8e8ea65edfdba07b28548c 177 Gene3D G3DSA:3.30.1060.10 1 165 3.4E-67 T 14-10-2018 IPR036509 Peptide methionine sulphoxide reductase MsrA superfamily GO:0008113|GO:0055114 Reactome: R-HSA-5676934 GYO_2392 42e1f3507e8e8ea65edfdba07b28548c 177 Pfam PF01625 Peptide methionine sulfoxide reductase 8 158 1.7E-61 T 14-10-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 GYO_0708 32fa374af4373298723709c9c3d347d2 248 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 80 91 2.8E-5 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR GYO_0708 32fa374af4373298723709c9c3d347d2 248 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 133 141 2.8E-5 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR GYO_0708 32fa374af4373298723709c9c3d347d2 248 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 153 172 2.8E-5 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR GYO_0708 32fa374af4373298723709c9c3d347d2 248 Gene3D G3DSA:3.40.50.720 1 248 1.0E-69 T 14-10-2018 GYO_0708 32fa374af4373298723709c9c3d347d2 248 SUPERFAMILY SSF51735 1 232 8.79E-68 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily GYO_0708 32fa374af4373298723709c9c3d347d2 248 Pfam PF00106 short chain dehydrogenase 7 197 2.6E-56 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR GYO_0708 32fa374af4373298723709c9c3d347d2 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 80 91 1.1E-24 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR GYO_0708 32fa374af4373298723709c9c3d347d2 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 174 191 1.1E-24 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR GYO_0708 32fa374af4373298723709c9c3d347d2 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 1.1E-24 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR GYO_0708 32fa374af4373298723709c9c3d347d2 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 153 172 1.1E-24 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR GYO_0708 32fa374af4373298723709c9c3d347d2 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 210 230 1.1E-24 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR GYO_0708 32fa374af4373298723709c9c3d347d2 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 127 143 1.1E-24 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR GYO_0708 32fa374af4373298723709c9c3d347d2 248 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 140 168 - T 14-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 GYO_4392 651ed563c3a681a8efe2b4467bf5ec1f 380 SUPERFAMILY SSF46689 197 266 2.84E-13 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 GYO_4392 651ed563c3a681a8efe2b4467bf5ec1f 380 SUPERFAMILY SSF46689 7 72 6.48E-13 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 GYO_4392 651ed563c3a681a8efe2b4467bf5ec1f 380 Pfam PF00440 Bacterial regulatory proteins, tetR family 215 252 1.0E-7 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 GYO_4392 651ed563c3a681a8efe2b4467bf5ec1f 380 Pfam PF00440 Bacterial regulatory proteins, tetR family 13 53 3.5E-8 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 GYO_4392 651ed563c3a681a8efe2b4467bf5ec1f 380 Gene3D G3DSA:1.10.357.10 197 369 3.2E-27 T 14-10-2018 GYO_4392 651ed563c3a681a8efe2b4467bf5ec1f 380 Gene3D G3DSA:1.10.357.10 4 181 2.1E-27 T 14-10-2018 GYO_1689 e3a86199bf68191b117f366eaeccd8ff 178 Gene3D G3DSA:2.60.120.10 1 171 1.2E-59 T 14-10-2018 IPR014710 RmlC-like jelly roll fold GYO_1689 e3a86199bf68191b117f366eaeccd8ff 178 SUPERFAMILY SSF51182 8 174 2.97E-32 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily GYO_1689 e3a86199bf68191b117f366eaeccd8ff 178 Hamap MF_01682 Acireductone dioxygenase [mtnD]. 1 176 30.145 T 14-10-2018 IPR023956 Acireductone dioxygenase ARD, bacteria GO:0005506|GO:0010308|GO:0010309|GO:0016151|GO:0019284|GO:0055114 KEGG: 00270+1.13.11.54+1.13.11.53|MetaCyc: PWY-4361|MetaCyc: PWY-5389 GYO_1689 e3a86199bf68191b117f366eaeccd8ff 178 Pfam PF03079 ARD/ARD' family 3 169 3.7E-53 T 14-10-2018 IPR004313 Acireductone dioxygenase ARD family GO:0010309|GO:0055114 KEGG: 00270+1.13.11.54|MetaCyc: PWY-4361|Reactome: R-HSA-1237112 GYO_2256 b088b4578ff30d74c80d168e2855a551 304 Pfam PF04294 VanW like protein 148 276 1.0E-49 T 14-10-2018 IPR007391 Vancomycin resistance VanW GYO_3817 bba41220951309fe1a913e92e540fce5 484 Gene3D G3DSA:1.25.40.10 155 324 1.5E-14 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 GYO_3817 bba41220951309fe1a913e92e540fce5 484 SUPERFAMILY SSF48452 23 305 2.49E-14 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 GYO_3817 bba41220951309fe1a913e92e540fce5 484 SMART SM00028 187 220 0.049 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 GYO_3817 bba41220951309fe1a913e92e540fce5 484 SMART SM00028 21 54 7.5 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 GYO_3817 bba41220951309fe1a913e92e540fce5 484 SMART SM00028 153 186 280.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 GYO_3817 bba41220951309fe1a913e92e540fce5 484 SMART SM00028 55 88 310.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 GYO_3817 bba41220951309fe1a913e92e540fce5 484 Pfam PF13432 Tetratricopeptide repeat 158 206 2.1E-5 T 14-10-2018 GYO_3817 bba41220951309fe1a913e92e540fce5 484 Gene3D G3DSA:1.25.40.10 5 137 1.9E-11 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 GYO_3817 bba41220951309fe1a913e92e540fce5 484 Pfam PF14559 Tetratricopeptide repeat 32 97 2.3E-6 T 14-10-2018 GYO_3016 4c51a888af2e08e1322562a746894da7 170 Pfam PF08977 Bypass of Forespore C, N terminal 41 91 2.5E-25 T 14-10-2018 IPR015071 Bypass-of-forespore C, N-terminal GYO_3016 4c51a888af2e08e1322562a746894da7 170 Gene3D G3DSA:3.30.70.1740 93 170 7.0E-30 T 14-10-2018 IPR038117 Bypass of forespore C, C-terminal domain superfamily GYO_3016 4c51a888af2e08e1322562a746894da7 170 Pfam PF08955 BofC C-terminal domain 93 166 9.6E-27 T 14-10-2018 IPR015050 Bypass of forespore C, C-terminal GYO_3016 4c51a888af2e08e1322562a746894da7 170 Gene3D G3DSA:3.10.20.420 38 92 1.2E-26 T 14-10-2018 IPR038118 Bypass-of-forespore C, N-terminal domain superfamily GYO_2417 d4d4c93025f2abd4554cd96b040af7c8 66 Pfam PF00313 'Cold-shock' DNA-binding domain 3 65 1.5E-29 T 14-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 GYO_2417 d4d4c93025f2abd4554cd96b040af7c8 66 ProSitePatterns PS00352 'Cold-shock' domain signature. 15 33 - T 14-10-2018 IPR019844 Cold-shock conserved site GYO_2417 d4d4c93025f2abd4554cd96b040af7c8 66 SMART SM00357 3 66 2.0E-29 T 14-10-2018 IPR011129 Cold shock domain GO:0003676 GYO_2417 d4d4c93025f2abd4554cd96b040af7c8 66 Gene3D G3DSA:2.40.50.140 1 66 5.9E-30 T 14-10-2018 GYO_2417 d4d4c93025f2abd4554cd96b040af7c8 66 PIRSF PIRSF002599 1 66 5.0E-24 T 14-10-2018 IPR012156 Cold shock, CspA GO:0003676 GYO_2417 d4d4c93025f2abd4554cd96b040af7c8 66 SUPERFAMILY SSF50249 1 65 9.04E-25 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold GYO_2417 d4d4c93025f2abd4554cd96b040af7c8 66 PRINTS PR00050 Cold shock protein signature 39 57 5.0E-19 T 14-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 GYO_2417 d4d4c93025f2abd4554cd96b040af7c8 66 PRINTS PR00050 Cold shock protein signature 24 33 5.0E-19 T 14-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 GYO_2417 d4d4c93025f2abd4554cd96b040af7c8 66 PRINTS PR00050 Cold shock protein signature 4 19 5.0E-19 T 14-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 GYO_0457 3223e8fedf1b5be0d57a34fc9673e2c7 204 Pfam PF12730 ABC-2 family transporter protein 3 162 2.2E-7 T 14-10-2018 IPR032688 ABC-2 family transporter protein GO:0055085 GYO_3721 383eddb67e8fd9d9d630f44f0be36879 464 ProSitePatterns PS00216 Sugar transport proteins signature 1. 80 97 - T 14-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 GYO_3721 383eddb67e8fd9d9d630f44f0be36879 464 Pfam PF00083 Sugar (and other) transporter 30 462 2.0E-113 T 14-10-2018 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 GYO_3721 383eddb67e8fd9d9d630f44f0be36879 464 PRINTS PR00171 Sugar transporter signature 117 136 2.4E-21 T 14-10-2018 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022857|GO:0055085 Reactome: R-HSA-189200 GYO_3721 383eddb67e8fd9d9d630f44f0be36879 464 PRINTS PR00171 Sugar transporter signature 277 287 2.4E-21 T 14-10-2018 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022857|GO:0055085 Reactome: R-HSA-189200 GYO_3721 383eddb67e8fd9d9d630f44f0be36879 464 PRINTS PR00171 Sugar transporter signature 386 398 2.4E-21 T 14-10-2018 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022857|GO:0055085 Reactome: R-HSA-189200 GYO_3721 383eddb67e8fd9d9d630f44f0be36879 464 PRINTS PR00171 Sugar transporter signature 363 384 2.4E-21 T 14-10-2018 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022857|GO:0055085 Reactome: R-HSA-189200 GYO_3721 383eddb67e8fd9d9d630f44f0be36879 464 PRINTS PR00171 Sugar transporter signature 34 44 2.4E-21 T 14-10-2018 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022857|GO:0055085 Reactome: R-HSA-189200 GYO_3721 383eddb67e8fd9d9d630f44f0be36879 464 TIGRFAM TIGR00879 SP: MFS transporter, sugar porter (SP) family 13 458 1.5E-114 T 14-10-2018 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022857|GO:0055085 Reactome: R-HSA-189200 GYO_3721 383eddb67e8fd9d9d630f44f0be36879 464 ProSitePatterns PS00217 Sugar transport proteins signature 2. 122 147 - T 14-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 GYO_3721 383eddb67e8fd9d9d630f44f0be36879 464 SUPERFAMILY SSF103473 1 459 1.44E-80 T 14-10-2018 IPR036259 MFS transporter superfamily GYO_3721 383eddb67e8fd9d9d630f44f0be36879 464 Gene3D G3DSA:1.20.1250.20 17 462 3.9E-133 T 14-10-2018 GYO_3721 383eddb67e8fd9d9d630f44f0be36879 464 ProSitePatterns PS00216 Sugar transport proteins signature 1. 321 338 - T 14-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 GYO_1453 e5da0e8a2c2336923f69f8e1888f676d 192 Pfam PF13508 Acetyltransferase (GNAT) domain 54 110 2.6E-7 T 14-10-2018 IPR000182 GNAT domain GYO_1453 e5da0e8a2c2336923f69f8e1888f676d 192 Gene3D G3DSA:3.40.630.30 1 139 2.9E-22 T 14-10-2018 GYO_1453 e5da0e8a2c2336923f69f8e1888f676d 192 SUPERFAMILY SSF55729 48 114 1.35E-7 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase GYO_3458 1303c44e7bdec2741b33bb86c33635ff 214 SMART SM00421 151 208 2.4E-18 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 GYO_3458 1303c44e7bdec2741b33bb86c33635ff 214 Gene3D G3DSA:1.10.10.10 153 213 1.7E-18 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily GYO_3458 1303c44e7bdec2741b33bb86c33635ff 214 SMART SM00448 2 117 4.9E-16 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 GYO_3458 1303c44e7bdec2741b33bb86c33635ff 214 SUPERFAMILY SSF46894 148 212 2.24E-16 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 GYO_3458 1303c44e7bdec2741b33bb86c33635ff 214 Gene3D G3DSA:3.40.50.2300 2 141 5.3E-24 T 14-10-2018 GYO_3458 1303c44e7bdec2741b33bb86c33635ff 214 Pfam PF00196 Bacterial regulatory proteins, luxR family 152 208 6.7E-19 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 GYO_3458 1303c44e7bdec2741b33bb86c33635ff 214 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 168 184 5.0E-7 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 GYO_3458 1303c44e7bdec2741b33bb86c33635ff 214 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 184 196 5.0E-7 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 GYO_3458 1303c44e7bdec2741b33bb86c33635ff 214 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 154 168 5.0E-7 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 GYO_3458 1303c44e7bdec2741b33bb86c33635ff 214 SUPERFAMILY SSF52172 1 128 1.57E-21 T 14-10-2018 IPR011006 CheY-like superfamily GYO_3458 1303c44e7bdec2741b33bb86c33635ff 214 ProSitePatterns PS00622 LuxR-type HTH domain signature. 168 195 - T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 GYO_3458 1303c44e7bdec2741b33bb86c33635ff 214 Pfam PF00072 Response regulator receiver domain 4 117 1.0E-23 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 GYO_3601 b64c9e2878ac10b6897830fdc63b5f11 284 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 139 167 - T 14-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 GYO_3601 b64c9e2878ac10b6897830fdc63b5f11 284 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 132 140 8.7E-11 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR GYO_3601 b64c9e2878ac10b6897830fdc63b5f11 284 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 79 90 8.7E-11 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR GYO_3601 b64c9e2878ac10b6897830fdc63b5f11 284 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 152 171 8.7E-11 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR GYO_3601 b64c9e2878ac10b6897830fdc63b5f11 284 Gene3D G3DSA:3.40.50.720 2 262 1.3E-69 T 14-10-2018 GYO_3601 b64c9e2878ac10b6897830fdc63b5f11 284 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 126 142 1.8E-26 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR GYO_3601 b64c9e2878ac10b6897830fdc63b5f11 284 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 5 22 1.8E-26 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR GYO_3601 b64c9e2878ac10b6897830fdc63b5f11 284 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 79 90 1.8E-26 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR GYO_3601 b64c9e2878ac10b6897830fdc63b5f11 284 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 173 190 1.8E-26 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR GYO_3601 b64c9e2878ac10b6897830fdc63b5f11 284 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 221 241 1.8E-26 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR GYO_3601 b64c9e2878ac10b6897830fdc63b5f11 284 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 152 171 1.8E-26 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR GYO_3601 b64c9e2878ac10b6897830fdc63b5f11 284 SUPERFAMILY SSF51735 3 243 7.69E-61 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily GYO_3601 b64c9e2878ac10b6897830fdc63b5f11 284 Pfam PF00106 short chain dehydrogenase 4 192 3.1E-47 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR GYO_0437 4ddb8a61ccaab6115246ec3c8fae16dc 362 ProSitePatterns PS00770 Aminotransferases class-IV signature. 239 268 - T 14-10-2018 IPR018300 Aminotransferase, class IV, conserved site GO:0003824 Reactome: R-HSA-70895 GYO_0437 4ddb8a61ccaab6115246ec3c8fae16dc 362 PIRSF PIRSF006468 7 362 1.0E-130 T 14-10-2018 IPR005786 Branched-chain amino acid aminotransferase II GO:0004084|GO:0009081 KEGG: 00270+2.6.1.42|KEGG: 00280+2.6.1.42|KEGG: 00290+2.6.1.42|KEGG: 00770+2.6.1.42|KEGG: 00966+2.6.1.42|MetaCyc: PWY-5057|MetaCyc: PWY-5076|MetaCyc: PWY-5078|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5108|MetaCyc: PWY-7767|Reactome: R-HSA-70895 GYO_0437 4ddb8a61ccaab6115246ec3c8fae16dc 362 Gene3D G3DSA:3.30.470.10 31 358 1.5E-137 T 14-10-2018 GYO_0437 4ddb8a61ccaab6115246ec3c8fae16dc 362 Pfam PF01063 Amino-transferase class IV 75 318 5.3E-41 T 14-10-2018 IPR001544 Aminotransferase class IV GO:0003824 Reactome: R-HSA-70895 GYO_0437 4ddb8a61ccaab6115246ec3c8fae16dc 362 Gene3D G3DSA:3.20.10.10 177 345 1.5E-137 T 14-10-2018 GYO_0437 4ddb8a61ccaab6115246ec3c8fae16dc 362 TIGRFAM TIGR01123 ilvE_II: branched-chain amino acid aminotransferase 50 362 3.5E-143 T 14-10-2018 IPR005786 Branched-chain amino acid aminotransferase II GO:0004084|GO:0009081 KEGG: 00270+2.6.1.42|KEGG: 00280+2.6.1.42|KEGG: 00290+2.6.1.42|KEGG: 00770+2.6.1.42|KEGG: 00966+2.6.1.42|MetaCyc: PWY-5057|MetaCyc: PWY-5076|MetaCyc: PWY-5078|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5108|MetaCyc: PWY-7767|Reactome: R-HSA-70895 GYO_0437 4ddb8a61ccaab6115246ec3c8fae16dc 362 SUPERFAMILY SSF56752 11 359 6.02E-120 T 14-10-2018 IPR036038 Aminotransferase-like, PLP-dependent enzymes GO:0003824 Reactome: R-HSA-70895 GYO_3625 0e851511af00e6bcef9ed1d444053562 314 Gene3D G3DSA:3.40.50.1980 21 175 1.0E-40 T 14-10-2018 GYO_3625 0e851511af00e6bcef9ed1d444053562 314 Pfam PF01497 Periplasmic binding protein 60 287 4.5E-44 T 14-10-2018 IPR002491 ABC transporter periplasmic binding domain GYO_3625 0e851511af00e6bcef9ed1d444053562 314 SUPERFAMILY SSF53807 38 310 3.92E-70 T 14-10-2018 GYO_3625 0e851511af00e6bcef9ed1d444053562 314 Gene3D G3DSA:3.40.50.1980 180 310 3.9E-42 T 14-10-2018 GYO_2144 7edbc77cfac29fb88b73210fef919f17 542 Pfam PF14158 YndJ-like protein 29 280 9.0E-77 T 14-10-2018 IPR025450 YndJ-like protein GYO_3880 4b0200a9c21bbd271026002d57059cfe 279 Gene3D G3DSA:1.10.8.410 226 279 2.8E-29 T 14-10-2018 GYO_3880 4b0200a9c21bbd271026002d57059cfe 279 SUPERFAMILY SSF64518 1 279 3.66E-92 T 14-10-2018 GYO_3880 4b0200a9c21bbd271026002d57059cfe 279 Gene3D G3DSA:1.20.58.1830 3 31 1.1E-64 T 14-10-2018 GYO_3880 4b0200a9c21bbd271026002d57059cfe 279 Pfam PF00700 Bacterial flagellin C-terminal helical region 194 278 2.2E-32 T 14-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 GYO_3880 4b0200a9c21bbd271026002d57059cfe 279 Gene3D G3DSA:1.20.1330.10 43 178 1.1E-64 T 14-10-2018 GYO_3880 4b0200a9c21bbd271026002d57059cfe 279 Pfam PF00669 Bacterial flagellin N-terminal helical region 3 143 1.1E-44 T 14-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 GYO_3880 4b0200a9c21bbd271026002d57059cfe 279 PRINTS PR00207 Flagellin signature 74 93 3.1E-25 T 14-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 GYO_3880 4b0200a9c21bbd271026002d57059cfe 279 PRINTS PR00207 Flagellin signature 35 52 3.1E-25 T 14-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 GYO_3880 4b0200a9c21bbd271026002d57059cfe 279 PRINTS PR00207 Flagellin signature 111 134 3.1E-25 T 14-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 GYO_4121 6017732213f4ca6de910229251a7bd7c 394 Gene3D G3DSA:3.30.830.10 3 179 2.9E-13 T 14-10-2018 GYO_4121 6017732213f4ca6de910229251a7bd7c 394 SUPERFAMILY SSF63411 6 177 8.55E-9 T 14-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 GYO_4121 6017732213f4ca6de910229251a7bd7c 394 Gene3D G3DSA:3.30.830.10 219 387 1.7E-14 T 14-10-2018 GYO_4121 6017732213f4ca6de910229251a7bd7c 394 Pfam PF05193 Peptidase M16 inactive domain 236 332 2.7E-4 T 14-10-2018 IPR007863 Peptidase M16, C-terminal GYO_4121 6017732213f4ca6de910229251a7bd7c 394 SUPERFAMILY SSF63411 235 383 1.83E-13 T 14-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 GYO_2512 3efd4f55572a5f8bbec818cc6bb39302 345 PIRSF PIRSF000114 1 333 4.2E-114 T 14-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 GYO_2512 3efd4f55572a5f8bbec818cc6bb39302 345 Gene3D G3DSA:3.40.50.720 1 184 1.7E-66 T 14-10-2018 GYO_2512 3efd4f55572a5f8bbec818cc6bb39302 345 Pfam PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus 181 321 4.2E-56 T 14-10-2018 IPR006109 Glycerol-3-phosphate dehydrogenase, NAD-dependent, C-terminal GO:0004367|GO:0005975|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 GYO_2512 3efd4f55572a5f8bbec818cc6bb39302 345 Hamap MF_00394 Glycerol-3-phosphate dehydrogenase [NAD(P)+] [gpsA]. 2 323 39.734 T 14-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 GYO_2512 3efd4f55572a5f8bbec818cc6bb39302 345 ProSitePatterns PS00957 NAD-dependent glycerol-3-phosphate dehydrogenase signature. 189 210 - T 14-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 GYO_2512 3efd4f55572a5f8bbec818cc6bb39302 345 SUPERFAMILY SSF51735 3 179 8.2E-59 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily GYO_2512 3efd4f55572a5f8bbec818cc6bb39302 345 Gene3D G3DSA:1.10.1040.10 185 328 1.4E-54 T 14-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 GYO_2512 3efd4f55572a5f8bbec818cc6bb39302 345 Pfam PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus 4 161 5.1E-55 T 14-10-2018 IPR011128 Glycerol-3-phosphate dehydrogenase, NAD-dependent, N-terminal GO:0016616|GO:0046168|GO:0051287|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 GYO_2512 3efd4f55572a5f8bbec818cc6bb39302 345 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 56 83 5.1E-48 T 14-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 GYO_2512 3efd4f55572a5f8bbec818cc6bb39302 345 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 239 256 5.1E-48 T 14-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 GYO_2512 3efd4f55572a5f8bbec818cc6bb39302 345 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 174 198 5.1E-48 T 14-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 GYO_2512 3efd4f55572a5f8bbec818cc6bb39302 345 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 199 223 5.1E-48 T 14-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 GYO_2512 3efd4f55572a5f8bbec818cc6bb39302 345 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 6 23 5.1E-48 T 14-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 GYO_2512 3efd4f55572a5f8bbec818cc6bb39302 345 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 134 154 5.1E-48 T 14-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 GYO_2512 3efd4f55572a5f8bbec818cc6bb39302 345 SUPERFAMILY SSF48179 181 333 3.57E-59 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 GYO_0452 616a66fe46eaafd76aac18e929e5aad3 53 Gene3D G3DSA:2.10.230.20 1 53 6.2E-29 T 14-10-2018 GYO_0452 616a66fe46eaafd76aac18e929e5aad3 53 Pfam PF15777 Tryptophan RNA-binding attenuator protein inhibitory protein 1 52 6.4E-25 T 14-10-2018 IPR031538 Tryptophan RNA-binding attenuator protein inhibitory protein GYO_0452 616a66fe46eaafd76aac18e929e5aad3 53 SUPERFAMILY SSF57938 9 37 6.02E-6 T 14-10-2018 IPR036410 Heat shock protein DnaJ, cysteine-rich domain superfamily GYO_1075 429291b2dc5dba428a56821e4f4dd37f 333 Gene3D G3DSA:3.40.50.970 2 331 6.1E-124 T 14-10-2018 GYO_1075 429291b2dc5dba428a56821e4f4dd37f 333 SUPERFAMILY SSF52518 9 328 3.04E-100 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold GYO_1075 429291b2dc5dba428a56821e4f4dd37f 333 Pfam PF00676 Dehydrogenase E1 component 22 316 4.7E-92 T 14-10-2018 IPR001017 Dehydrogenase, E1 component GO:0016624 Reactome: R-HSA-389661 GYO_1398 91891de742b63c5ce88462794ca42daa 389 TIGRFAM TIGR00339 sopT: sulfate adenylyltransferase 6 372 4.1E-137 T 14-10-2018 IPR002650 Sulphate adenylyltransferase GO:0000103|GO:0004781 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932|Reactome: R-HSA-174362|Reactome: R-HSA-2408550 GYO_1398 91891de742b63c5ce88462794ca42daa 389 Hamap MF_00066 Sulfate adenylyltransferase [sat]. 21 376 50.41 T 14-10-2018 IPR020792 Sulphate adenylyltransferase, prokaryotic-type GO:0000103|GO:0004781 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932 GYO_1398 91891de742b63c5ce88462794ca42daa 389 Gene3D G3DSA:3.40.50.620 162 374 6.0E-99 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold GYO_1398 91891de742b63c5ce88462794ca42daa 389 Pfam PF14306 PUA-like domain 5 152 6.8E-48 T 14-10-2018 IPR025980 ATP-sulfurylase PUA-like domain KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932|Reactome: R-HSA-174362|Reactome: R-HSA-2408550 GYO_1398 91891de742b63c5ce88462794ca42daa 389 SUPERFAMILY SSF88697 5 158 5.27E-47 T 14-10-2018 IPR015947 PUA-like superfamily GYO_1398 91891de742b63c5ce88462794ca42daa 389 Gene3D G3DSA:3.10.400.10 4 153 1.3E-45 T 14-10-2018 GYO_1398 91891de742b63c5ce88462794ca42daa 389 Pfam PF01747 ATP-sulfurylase 162 372 4.3E-97 T 14-10-2018 IPR024951 Sulphate adenylyltransferase catalytic domain GO:0004781 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932|Reactome: R-HSA-174362|Reactome: R-HSA-2408550 GYO_1398 91891de742b63c5ce88462794ca42daa 389 SUPERFAMILY SSF52374 162 375 2.78E-87 T 14-10-2018 GYO_0844 05fc0dea6c94e6ce84115203b45a826a 299 Gene3D G3DSA:3.30.420.40 1 102 3.9E-32 T 14-10-2018 GYO_0844 05fc0dea6c94e6ce84115203b45a826a 299 Pfam PF00480 ROK family 3 286 2.0E-72 T 14-10-2018 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 GYO_0844 05fc0dea6c94e6ce84115203b45a826a 299 Gene3D G3DSA:3.30.420.40 103 299 1.5E-80 T 14-10-2018 GYO_0844 05fc0dea6c94e6ce84115203b45a826a 299 ProSitePatterns PS01125 ROK family signature. 128 153 - T 14-10-2018 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 GYO_0844 05fc0dea6c94e6ce84115203b45a826a 299 SUPERFAMILY SSF53067 3 288 2.49E-48 T 14-10-2018 GYO_0131 83a4a43f7af85d08a59cd963392aa74a 166 Hamap MF_00362 50S ribosomal protein L10 [rplJ]. 3 161 29.595 T 14-10-2018 IPR022973 Ribosomal protein L10 GYO_0131 83a4a43f7af85d08a59cd963392aa74a 166 SUPERFAMILY SSF160369 5 160 3.53E-55 T 14-10-2018 GYO_0131 83a4a43f7af85d08a59cd963392aa74a 166 Pfam PF00466 Ribosomal protein L10 6 101 1.9E-30 T 14-10-2018 IPR001790 Ribosomal protein L10P GO:0005622|GO:0042254 GYO_0131 83a4a43f7af85d08a59cd963392aa74a 166 ProSitePatterns PS01109 Ribosomal protein L10 signature. 8 42 - T 14-10-2018 IPR002363 Ribosomal protein L10, eubacterial, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 GYO_0131 83a4a43f7af85d08a59cd963392aa74a 166 Gene3D G3DSA:3.30.70.1730 2 165 4.1E-43 T 14-10-2018 GYO_0609 3e810821391ca3cf75f9f11897cd07f5 287 Pfam PF06800 Sugar transport protein 4 282 1.0E-112 T 14-10-2018 IPR010651 Sugar transport protein GO:0015144|GO:0016021|GO:0034219 GYO_0609 3e810821391ca3cf75f9f11897cd07f5 287 SUPERFAMILY SSF103481 37 138 3.66E-8 T 14-10-2018 GYO_0609 3e810821391ca3cf75f9f11897cd07f5 287 TIGRFAM TIGR00776 RhaT: RhaT L-rhamnose-proton symporter family protein 1 284 7.7E-118 T 14-10-2018 GYO_0609 3e810821391ca3cf75f9f11897cd07f5 287 SUPERFAMILY SSF103481 200 271 2.88E-5 T 14-10-2018 GYO_4320 949c5f69aef5de451bee3180adceaff6 428 Gene3D G3DSA:1.20.1250.20 227 425 1.3E-22 T 14-10-2018 GYO_4320 949c5f69aef5de451bee3180adceaff6 428 Pfam PF11700 Vacuole effluxer Atg22 like 9 132 1.6E-11 T 14-10-2018 IPR024671 Autophagy-related protein 22-like GYO_4320 949c5f69aef5de451bee3180adceaff6 428 Pfam PF11700 Vacuole effluxer Atg22 like 139 415 2.1E-49 T 14-10-2018 IPR024671 Autophagy-related protein 22-like GYO_4320 949c5f69aef5de451bee3180adceaff6 428 SUPERFAMILY SSF103473 18 417 7.19E-40 T 14-10-2018 IPR036259 MFS transporter superfamily GYO_4320 949c5f69aef5de451bee3180adceaff6 428 Gene3D G3DSA:1.20.1250.20 12 204 2.6E-6 T 14-10-2018 GYO_2492 7fe4d0cad04aba228c729ca944d63a45 215 Pfam PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase 7 204 1.6E-53 T 14-10-2018 IPR001240 N-(5'phosphoribosyl) anthranilate isomerase (PRAI) GO:0004640|GO:0006568 KEGG: 00400+5.3.1.24 GYO_2492 7fe4d0cad04aba228c729ca944d63a45 215 Gene3D G3DSA:3.20.20.70 5 211 2.9E-52 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 GYO_2492 7fe4d0cad04aba228c729ca944d63a45 215 SUPERFAMILY SSF51366 5 206 6.59E-45 T 14-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 GYO_2492 7fe4d0cad04aba228c729ca944d63a45 215 Hamap MF_00135 N-(5'-phosphoribosyl)anthranilate isomerase [trpF]. 4 210 30.537 T 14-10-2018 IPR001240 N-(5'phosphoribosyl) anthranilate isomerase (PRAI) GO:0004640|GO:0006568 KEGG: 00400+5.3.1.24 GYO_2437 7b5cc35786389b311503067a5e5099dc 339 SUPERFAMILY SSF53822 66 327 1.04E-56 T 14-10-2018 IPR028082 Periplasmic binding protein-like I GYO_2437 7b5cc35786389b311503067a5e5099dc 339 SMART SM00354 8 79 3.2E-34 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 GYO_2437 7b5cc35786389b311503067a5e5099dc 339 Gene3D G3DSA:1.10.260.40 7 68 2.9E-20 T 14-10-2018 GYO_2437 7b5cc35786389b311503067a5e5099dc 339 Gene3D G3DSA:3.40.50.2300 69 321 6.9E-67 T 14-10-2018 GYO_2437 7b5cc35786389b311503067a5e5099dc 339 Pfam PF13377 Periplasmic binding protein-like domain 177 338 1.0E-24 T 14-10-2018 GYO_2437 7b5cc35786389b311503067a5e5099dc 339 Gene3D G3DSA:3.40.50.2300 166 300 6.9E-67 T 14-10-2018 GYO_2437 7b5cc35786389b311503067a5e5099dc 339 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 20 30 6.3E-6 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 GYO_2437 7b5cc35786389b311503067a5e5099dc 339 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 10 20 6.3E-6 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 GYO_2437 7b5cc35786389b311503067a5e5099dc 339 Pfam PF00356 Bacterial regulatory proteins, lacI family 10 56 2.2E-17 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 GYO_2437 7b5cc35786389b311503067a5e5099dc 339 SUPERFAMILY SSF47413 8 67 3.38E-15 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 GYO_2437 7b5cc35786389b311503067a5e5099dc 339 ProSitePatterns PS00356 LacI-type HTH domain signature. 11 29 - T 14-10-2018 GYO_4017 2dc1960007ab15d2a8c5a0024a54f9f8 193 SMART SM00014 53 160 8.4E-30 T 14-10-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase GYO_4017 2dc1960007ab15d2a8c5a0024a54f9f8 193 Pfam PF01569 PAP2 superfamily 54 163 2.4E-18 T 14-10-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase GYO_4017 2dc1960007ab15d2a8c5a0024a54f9f8 193 Gene3D G3DSA:1.20.144.10 81 175 1.1E-16 T 14-10-2018 GYO_4017 2dc1960007ab15d2a8c5a0024a54f9f8 193 SUPERFAMILY SSF48317 2 169 3.53E-37 T 14-10-2018 IPR036938 Phosphatidic acid phosphatase type 2/haloperoxidase superfamily GYO_0458 46c3dd71ddd345480b4fd30c25510a44 128 Pfam PF10710 Protein of unknown function (DUF2512) 1 120 8.8E-37 T 14-10-2018 IPR019649 Protein of unknown function DUF2512 GYO_1892 2f4b8473b3bece5b6e89c9ae071a38bd 921 SUPERFAMILY SSF52374 1 640 9.86E-155 T 14-10-2018 GYO_1892 2f4b8473b3bece5b6e89c9ae071a38bd 921 TIGRFAM TIGR00392 ileS: isoleucine--tRNA ligase 14 833 0.0 T 14-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 GYO_1892 2f4b8473b3bece5b6e89c9ae071a38bd 921 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 57 68 - T 14-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 GYO_1892 2f4b8473b3bece5b6e89c9ae071a38bd 921 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 553 562 1.8E-32 T 14-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 GYO_1892 2f4b8473b3bece5b6e89c9ae071a38bd 921 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 391 406 1.8E-32 T 14-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 GYO_1892 2f4b8473b3bece5b6e89c9ae071a38bd 921 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 519 532 1.8E-32 T 14-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 GYO_1892 2f4b8473b3bece5b6e89c9ae071a38bd 921 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 229 252 1.8E-32 T 14-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 GYO_1892 2f4b8473b3bece5b6e89c9ae071a38bd 921 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 50 61 1.8E-32 T 14-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 GYO_1892 2f4b8473b3bece5b6e89c9ae071a38bd 921 Hamap MF_02002 Isoleucine--tRNA ligase [ileS]. 1 916 20.633 T 14-10-2018 IPR023585 Isoleucine-tRNA ligase, type 1 GO:0004822 KEGG: 00970+6.1.1.5|Reactome: R-HSA-379726 GYO_1892 2f4b8473b3bece5b6e89c9ae071a38bd 921 Gene3D G3DSA:1.10.730.20 632 918 9.0E-92 T 14-10-2018 GYO_1892 2f4b8473b3bece5b6e89c9ae071a38bd 921 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 27 633 2.0E-220 T 14-10-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 GYO_1892 2f4b8473b3bece5b6e89c9ae071a38bd 921 Pfam PF08264 Anticodon-binding domain of tRNA 677 829 3.4E-31 T 14-10-2018 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0004812|GO:0006418 GYO_1892 2f4b8473b3bece5b6e89c9ae071a38bd 921 SUPERFAMILY SSF47323 644 917 1.35E-73 T 14-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 GYO_1892 2f4b8473b3bece5b6e89c9ae071a38bd 921 Gene3D G3DSA:3.90.740.10 194 398 3.4E-262 T 14-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 GYO_1892 2f4b8473b3bece5b6e89c9ae071a38bd 921 SUPERFAMILY SSF50677 203 393 3.35E-62 T 14-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 GYO_1892 2f4b8473b3bece5b6e89c9ae071a38bd 921 Gene3D G3DSA:3.40.50.620 24 621 3.4E-262 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold GYO_0809 4175816030d9125197763b76b8a55562 447 Pfam PF00083 Sugar (and other) transporter 14 435 1.3E-111 T 14-10-2018 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 GYO_0809 4175816030d9125197763b76b8a55562 447 SUPERFAMILY SSF103473 7 435 2.49E-77 T 14-10-2018 IPR036259 MFS transporter superfamily GYO_0809 4175816030d9125197763b76b8a55562 447 PRINTS PR00171 Sugar transporter signature 19 29 2.2E-24 T 14-10-2018 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022857|GO:0055085 Reactome: R-HSA-189200 GYO_0809 4175816030d9125197763b76b8a55562 447 PRINTS PR00171 Sugar transporter signature 102 121 2.2E-24 T 14-10-2018 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022857|GO:0055085 Reactome: R-HSA-189200 GYO_0809 4175816030d9125197763b76b8a55562 447 PRINTS PR00171 Sugar transporter signature 253 263 2.2E-24 T 14-10-2018 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022857|GO:0055085 Reactome: R-HSA-189200 GYO_0809 4175816030d9125197763b76b8a55562 447 PRINTS PR00171 Sugar transporter signature 362 374 2.2E-24 T 14-10-2018 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022857|GO:0055085 Reactome: R-HSA-189200 GYO_0809 4175816030d9125197763b76b8a55562 447 PRINTS PR00171 Sugar transporter signature 339 360 2.2E-24 T 14-10-2018 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022857|GO:0055085 Reactome: R-HSA-189200 GYO_0809 4175816030d9125197763b76b8a55562 447 ProSitePatterns PS00216 Sugar transport proteins signature 1. 297 313 - T 14-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 GYO_0809 4175816030d9125197763b76b8a55562 447 TIGRFAM TIGR00879 SP: MFS transporter, sugar porter (SP) family 3 434 4.9E-112 T 14-10-2018 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022857|GO:0055085 Reactome: R-HSA-189200 GYO_0809 4175816030d9125197763b76b8a55562 447 Gene3D G3DSA:1.20.1250.20 3 440 6.6E-128 T 14-10-2018 GYO_3237 d7d3466466641f7fe6dba6b6c8fa74e9 281 SUPERFAMILY SSF56281 3 262 8.35E-46 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like GYO_3237 d7d3466466641f7fe6dba6b6c8fa74e9 281 Gene3D G3DSA:3.60.15.10 4 269 6.5E-85 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like GYO_3237 d7d3466466641f7fe6dba6b6c8fa74e9 281 Pfam PF00753 Metallo-beta-lactamase superfamily 54 250 3.7E-14 T 14-10-2018 IPR001279 Metallo-beta-lactamase GYO_3237 d7d3466466641f7fe6dba6b6c8fa74e9 281 SMART SM00849 50 257 1.3E-18 T 14-10-2018 IPR001279 Metallo-beta-lactamase GYO_2722 ca3f50133144a09e8971135de027cfc2 261 Pfam PF12389 Camelysin metallo-endopeptidase 3 235 4.1E-38 T 14-10-2018 IPR022121 Peptidase M73, camelysin GYO_2722 ca3f50133144a09e8971135de027cfc2 261 TIGRFAM TIGR04088 cognate_SipW: SipW-cognate class signal peptide 11 44 7.5E-10 T 14-10-2018 IPR023833 Signal peptide, camelysin GYO_1723 97a131e4b4cc60730d7f98c293bd98a6 699 TIGRFAM TIGR02002 PTS-II-BC-glcB: PTS system, glucose-specific IIBC component 2 516 6.6E-247 T 14-10-2018 IPR011299 PTS system glucose-specific IIBC component GO:0005355|GO:0016021|GO:1904659 GYO_1723 97a131e4b4cc60730d7f98c293bd98a6 699 Pfam PF00367 phosphotransferase system, EIIB 444 476 1.6E-13 T 14-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 GYO_1723 97a131e4b4cc60730d7f98c293bd98a6 699 TIGRFAM TIGR00826 EIIB_glc: PTS system, glucose-like IIB component 413 500 4.0E-30 T 14-10-2018 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 GYO_1723 97a131e4b4cc60730d7f98c293bd98a6 699 Pfam PF02378 Phosphotransferase system, EIIC 14 354 1.4E-96 T 14-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 GYO_1723 97a131e4b4cc60730d7f98c293bd98a6 699 SUPERFAMILY SSF51261 546 693 1.17E-52 T 14-10-2018 IPR011055 Duplicated hybrid motif GYO_1723 97a131e4b4cc60730d7f98c293bd98a6 699 Gene3D G3DSA:2.70.70.10 538 699 1.6E-64 T 14-10-2018 IPR011055 Duplicated hybrid motif GYO_1723 97a131e4b4cc60730d7f98c293bd98a6 699 Gene3D G3DSA:3.30.1360.60 439 517 1.2E-27 T 14-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 GYO_1723 97a131e4b4cc60730d7f98c293bd98a6 699 Pfam PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 552 673 1.9E-48 T 14-10-2018 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 GYO_1723 97a131e4b4cc60730d7f98c293bd98a6 699 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 454 471 - T 14-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 GYO_1723 97a131e4b4cc60730d7f98c293bd98a6 699 ProSitePatterns PS00371 PTS EIIA domains phosphorylation site signature 1. 614 626 - T 14-10-2018 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 GYO_1723 97a131e4b4cc60730d7f98c293bd98a6 699 SUPERFAMILY SSF55604 443 513 1.57E-19 T 14-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 GYO_1723 97a131e4b4cc60730d7f98c293bd98a6 699 TIGRFAM TIGR00852 pts-Glc: PTS system, maltose and glucose-specific subfamily, IIC component 64 365 1.1E-99 T 14-10-2018 IPR004719 Phosphotransferase system, maltose/glucose-specific subfamily IIC component GO:0008982|GO:0009401|GO:0016021 GYO_1723 97a131e4b4cc60730d7f98c293bd98a6 699 TIGRFAM TIGR00830 PTBA: PTS system, glucose subfamily, IIA component 553 672 1.8E-46 T 14-10-2018 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 GYO_1248 47eeec07b3f03d24e2419ce226db67e1 393 SUPERFAMILY SSF53383 18 385 9.08E-80 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase GYO_1248 47eeec07b3f03d24e2419ce226db67e1 393 Pfam PF00155 Aminotransferase class I and II 39 380 1.6E-52 T 14-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 GYO_1248 47eeec07b3f03d24e2419ce226db67e1 393 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 240 253 - T 14-10-2018 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 GYO_1248 47eeec07b3f03d24e2419ce226db67e1 393 Gene3D G3DSA:3.40.640.10 69 298 4.3E-114 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 GYO_1248 47eeec07b3f03d24e2419ce226db67e1 393 PRINTS PR00753 1-aminocyclopropane-1-carboxylate synthase signature 166 190 4.0E-12 T 14-10-2018 GYO_1248 47eeec07b3f03d24e2419ce226db67e1 393 PRINTS PR00753 1-aminocyclopropane-1-carboxylate synthase signature 234 258 4.0E-12 T 14-10-2018 GYO_1248 47eeec07b3f03d24e2419ce226db67e1 393 PRINTS PR00753 1-aminocyclopropane-1-carboxylate synthase signature 99 119 4.0E-12 T 14-10-2018 GYO_1248 47eeec07b3f03d24e2419ce226db67e1 393 Gene3D G3DSA:3.90.1150.10 19 376 4.3E-114 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 GYO_1886 3485421b8e2eb26e8e96ca611db81292 230 PIRSF PIRSF004848 3 227 1.7E-67 T 14-10-2018 IPR011078 Pyridoxal phosphate homeostasis protein GO:0030170 GYO_1886 3485421b8e2eb26e8e96ca611db81292 230 Gene3D G3DSA:3.20.20.10 1 226 4.1E-78 T 14-10-2018 IPR029066 PLP-binding barrel GYO_1886 3485421b8e2eb26e8e96ca611db81292 230 SUPERFAMILY SSF51419 3 222 3.66E-72 T 14-10-2018 IPR029066 PLP-binding barrel GYO_1886 3485421b8e2eb26e8e96ca611db81292 230 ProSitePatterns PS01211 Uncharacterized protein family UPF0001 signature. 74 88 - T 14-10-2018 IPR011078 Pyridoxal phosphate homeostasis protein GO:0030170 GYO_1886 3485421b8e2eb26e8e96ca611db81292 230 TIGRFAM TIGR00044 TIGR00044: pyridoxal phosphate enzyme, YggS family 5 223 1.3E-52 T 14-10-2018 IPR011078 Pyridoxal phosphate homeostasis protein GO:0030170 GYO_1886 3485421b8e2eb26e8e96ca611db81292 230 Pfam PF01168 Alanine racemase, N-terminal domain 7 222 3.6E-19 T 14-10-2018 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 GYO_1886 3485421b8e2eb26e8e96ca611db81292 230 Hamap MF_02087 Pyridoxal phosphate homeostasis protein. 5 223 29.744 T 14-10-2018 IPR011078 Pyridoxal phosphate homeostasis protein GO:0030170 GYO_3406 26b82d83ea6310ea397b30a7fe5ce6fa 662 SUPERFAMILY SSF103190 111 190 2.28E-11 T 14-10-2018 IPR029151 Periplasmic sensor-like domain superfamily GYO_3406 26b82d83ea6310ea397b30a7fe5ce6fa 662 Pfam PF00672 HAMP domain 304 351 4.1E-14 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 GYO_3406 26b82d83ea6310ea397b30a7fe5ce6fa 662 SMART SM00283 384 659 7.4E-95 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 GYO_3406 26b82d83ea6310ea397b30a7fe5ce6fa 662 SUPERFAMILY SSF58104 323 659 4.19E-73 T 14-10-2018 GYO_3406 26b82d83ea6310ea397b30a7fe5ce6fa 662 Gene3D G3DSA:3.30.450.20 59 264 4.8E-35 T 14-10-2018 GYO_3406 26b82d83ea6310ea397b30a7fe5ce6fa 662 SMART SM00304 303 355 2.7E-14 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 GYO_3406 26b82d83ea6310ea397b30a7fe5ce6fa 662 SMART SM00319 33 151 2.5E-37 T 14-10-2018 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding GO:0006935|GO:0007165 GYO_3406 26b82d83ea6310ea397b30a7fe5ce6fa 662 Gene3D G3DSA:3.30.450.20 72 183 4.8E-35 T 14-10-2018 GYO_3406 26b82d83ea6310ea397b30a7fe5ce6fa 662 Gene3D G3DSA:1.10.287.950 352 659 7.0E-71 T 14-10-2018 GYO_3406 26b82d83ea6310ea397b30a7fe5ce6fa 662 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 430 612 1.4E-56 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 GYO_3406 26b82d83ea6310ea397b30a7fe5ce6fa 662 Pfam PF02743 Cache domain 50 265 3.5E-30 T 14-10-2018 IPR033479 Double Cache domain 1 GYO_2206 3379cca9876a71564c6f8273cdedb2d6 463 Pfam PF01554 MatE 257 418 4.6E-36 T 14-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 GYO_2206 3379cca9876a71564c6f8273cdedb2d6 463 Pfam PF01554 MatE 28 188 2.3E-40 T 14-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 GYO_2206 3379cca9876a71564c6f8273cdedb2d6 463 PIRSF PIRSF006603 2 463 2.1E-144 T 14-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 GYO_2206 3379cca9876a71564c6f8273cdedb2d6 463 TIGRFAM TIGR00797 matE: MATE efflux family protein 28 431 1.2E-108 T 14-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 GYO_4288 c0c74361a8f8eed31629d43ad33b1a67 278 Pfam PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 8 210 6.1E-62 T 14-10-2018 IPR003740 Uncharacterised membrane protein YitT GYO_4288 c0c74361a8f8eed31629d43ad33b1a67 278 PIRSF PIRSF006483 1 278 1.2E-82 T 14-10-2018 IPR003740 Uncharacterised membrane protein YitT GYO_4288 c0c74361a8f8eed31629d43ad33b1a67 278 Gene3D G3DSA:3.30.70.120 188 263 2.3E-23 T 14-10-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal GYO_4288 c0c74361a8f8eed31629d43ad33b1a67 278 Pfam PF10035 Uncharacterized protein conserved in bacteria (DUF2179) 216 270 8.8E-23 T 14-10-2018 IPR019264 Domain of unknown function DUF2179 GYO_1915 34148b42e0d7ac3a903d431fcc616c7f 287 Pfam PF03755 YicC-like family, N-terminal region 1 152 1.2E-34 T 14-10-2018 IPR013527 YicC-like, N-terminal GYO_1915 34148b42e0d7ac3a903d431fcc616c7f 287 Pfam PF08340 Domain of unknown function (DUF1732) 204 287 2.4E-38 T 14-10-2018 IPR013551 Domain of unknown function DUF1732 GYO_1915 34148b42e0d7ac3a903d431fcc616c7f 287 TIGRFAM TIGR00255 TIGR00255: TIGR00255 family protein 1 287 1.1E-132 T 14-10-2018 IPR005229 Conserved hypothetical protein CHP00255 GYO_1893 0e0b425fb15239770808eb0c8da3b3f3 123 PIRSF PIRSF026544 1 123 7.6E-68 T 14-10-2018 IPR016841 Transcription regulator DksA-related, predicted GYO_1893 0e0b425fb15239770808eb0c8da3b3f3 123 ProSitePatterns PS01102 Prokaryotic dksA C4-type zinc finger. 73 97 - T 14-10-2018 IPR020458 Zinc finger, DksA/TraR C4-type conserved site GYO_1893 0e0b425fb15239770808eb0c8da3b3f3 123 Gene3D G3DSA:1.20.120.910 1 97 1.5E-13 T 14-10-2018 GYO_0635 279afeaa4a0ada66b38fb5984fc7ad32 503 Pfam PF00501 AMP-binding enzyme 19 407 6.2E-98 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 GYO_0635 279afeaa4a0ada66b38fb5984fc7ad32 503 Gene3D G3DSA:3.40.50.12780 2 403 1.3E-103 T 14-10-2018 GYO_0635 279afeaa4a0ada66b38fb5984fc7ad32 503 Pfam PF13193 AMP-binding enzyme C-terminal domain 417 490 8.4E-16 T 14-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain GYO_0635 279afeaa4a0ada66b38fb5984fc7ad32 503 SUPERFAMILY SSF56801 19 500 1.01E-135 T 14-10-2018 GYO_0635 279afeaa4a0ada66b38fb5984fc7ad32 503 Gene3D G3DSA:3.30.300.310 404 503 3.5E-29 T 14-10-2018 GYO_0635 279afeaa4a0ada66b38fb5984fc7ad32 503 ProSitePatterns PS00455 Putative AMP-binding domain signature. 163 174 - T 14-10-2018 IPR020845 AMP-binding, conserved site GYO_1195 03e4552d118f476c64c072c98851854f 232 SMART SM00382 27 203 4.0E-17 T 14-10-2018 IPR003593 AAA+ ATPase domain GYO_1195 03e4552d118f476c64c072c98851854f 232 Gene3D G3DSA:3.40.50.300 3 231 7.3E-51 T 14-10-2018 GYO_1195 03e4552d118f476c64c072c98851854f 232 Pfam PF00005 ABC transporter 19 153 8.5E-24 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 GYO_1195 03e4552d118f476c64c072c98851854f 232 SUPERFAMILY SSF52540 3 228 1.03E-50 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase GYO_1014 2c74640fa1a5dc0de8f712be7ade273e 266 ProSitePatterns PS00211 ABC transporters family signature. 140 154 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 GYO_1014 2c74640fa1a5dc0de8f712be7ade273e 266 Gene3D G3DSA:3.40.50.300 3 255 7.7E-67 T 14-10-2018 GYO_1014 2c74640fa1a5dc0de8f712be7ade273e 266 Pfam PF00005 ABC transporter 20 167 2.9E-34 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 GYO_1014 2c74640fa1a5dc0de8f712be7ade273e 266 SUPERFAMILY SSF52540 4 231 2.82E-61 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase GYO_1014 2c74640fa1a5dc0de8f712be7ade273e 266 SMART SM00382 28 217 1.3E-14 T 14-10-2018 IPR003593 AAA+ ATPase domain GYO_1403 55ff3f02f402fbda2f6df75e35d94091 371 Pfam PF13378 Enolase C-terminal domain-like 144 359 1.6E-55 T 14-10-2018 IPR029065 Enolase C-terminal domain-like GYO_1403 55ff3f02f402fbda2f6df75e35d94091 371 Gene3D G3DSA:3.20.20.120 107 370 2.2E-74 T 14-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily GYO_1403 55ff3f02f402fbda2f6df75e35d94091 371 SUPERFAMILY SSF54826 1 115 7.55E-25 T 14-10-2018 GYO_1403 55ff3f02f402fbda2f6df75e35d94091 371 SMART SM00922 137 235 8.7E-13 T 14-10-2018 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal GYO_1403 55ff3f02f402fbda2f6df75e35d94091 371 SUPERFAMILY SSF51604 102 368 6.94E-56 T 14-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily GYO_1403 55ff3f02f402fbda2f6df75e35d94091 371 Pfam PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain 18 114 1.0E-7 T 14-10-2018 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain GYO_1403 55ff3f02f402fbda2f6df75e35d94091 371 Gene3D G3DSA:3.30.390.10 1 106 4.5E-32 T 14-10-2018 IPR029017 Enolase-like, N-terminal GYO_1880 637f611550bd5f8a6277fc5758f26a8f 260 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 228 254 - T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 GYO_1880 637f611550bd5f8a6277fc5758f26a8f 260 SUPERFAMILY SSF88659 176 258 4.11E-16 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like GYO_1880 637f611550bd5f8a6277fc5758f26a8f 260 TIGRFAM TIGR02850 spore_sigG: RNA polymerase sigma-G factor 4 258 9.6E-157 T 14-10-2018 IPR014212 RNA polymerase sigma-G type GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 GYO_1880 637f611550bd5f8a6277fc5758f26a8f 260 PRINTS PR00046 Major sigma-70 factor signature 91 99 2.3E-12 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 GYO_1880 637f611550bd5f8a6277fc5758f26a8f 260 PRINTS PR00046 Major sigma-70 factor signature 211 223 2.3E-12 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 GYO_1880 637f611550bd5f8a6277fc5758f26a8f 260 PRINTS PR00046 Major sigma-70 factor signature 228 243 2.3E-12 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 GYO_1880 637f611550bd5f8a6277fc5758f26a8f 260 PRINTS PR00046 Major sigma-70 factor signature 243 254 2.3E-12 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 GYO_1880 637f611550bd5f8a6277fc5758f26a8f 260 PRINTS PR00046 Major sigma-70 factor signature 67 80 2.3E-12 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 GYO_1880 637f611550bd5f8a6277fc5758f26a8f 260 SUPERFAMILY SSF88946 12 111 2.35E-33 T 14-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 GYO_1880 637f611550bd5f8a6277fc5758f26a8f 260 Gene3D G3DSA:1.10.10.10 112 165 2.2E-12 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily GYO_1880 637f611550bd5f8a6277fc5758f26a8f 260 Pfam PF04545 Sigma-70, region 4 208 254 3.2E-13 T 14-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 GYO_1880 637f611550bd5f8a6277fc5758f26a8f 260 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 67 80 - T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 GYO_1880 637f611550bd5f8a6277fc5758f26a8f 260 Gene3D G3DSA:1.20.120.1810 3 111 2.0E-27 T 14-10-2018 GYO_1880 637f611550bd5f8a6277fc5758f26a8f 260 TIGRFAM TIGR02980 SigBFG: RNA polymerase sigma-70 factor, sigma-B/F/G subfamily 37 258 7.9E-84 T 14-10-2018 IPR014322 RNA polymerase sigma-B/F/G type GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 GYO_1880 637f611550bd5f8a6277fc5758f26a8f 260 Pfam PF04542 Sigma-70 region 2 43 111 4.7E-17 T 14-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 GYO_1880 637f611550bd5f8a6277fc5758f26a8f 260 SUPERFAMILY SSF88659 115 191 2.75E-16 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like GYO_1880 637f611550bd5f8a6277fc5758f26a8f 260 Pfam PF04539 Sigma-70 region 3 125 176 1.5E-6 T 14-10-2018 IPR007624 RNA polymerase sigma-70 region 3 GO:0003700|GO:0006352|GO:0006355 GYO_1880 637f611550bd5f8a6277fc5758f26a8f 260 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 38 257 2.2E-35 T 14-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 GYO_1880 637f611550bd5f8a6277fc5758f26a8f 260 Gene3D G3DSA:1.10.10.10 186 260 1.3E-9 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily GYO_1880 637f611550bd5f8a6277fc5758f26a8f 260 PIRSF PIRSF000770 159 260 4.4E-14 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 GYO_1880 637f611550bd5f8a6277fc5758f26a8f 260 PIRSF PIRSF000770 13 122 8.9E-18 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 GYO_1880 637f611550bd5f8a6277fc5758f26a8f 260 PIRSF PIRSF000770 124 158 2.8 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 GYO_2940 62c0b4601a64e7ebab4bf5aa920b448f 162 Pfam PF03830 PTS system sorbose subfamily IIB component 3 149 7.6E-51 T 14-10-2018 IPR004720 Phosphotransferase system, sorbose subfamily IIB component GO:0005737|GO:0008982|GO:0009401 GYO_2940 62c0b4601a64e7ebab4bf5aa920b448f 162 SUPERFAMILY SSF52728 1 159 3.92E-53 T 14-10-2018 IPR036667 Phosphotransferase system, sorbose subfamily IIB component superfamily GO:0005737|GO:0008982|GO:0009401 GYO_2940 62c0b4601a64e7ebab4bf5aa920b448f 162 Gene3D G3DSA:3.40.35.10 1 162 2.4E-57 T 14-10-2018 IPR036667 Phosphotransferase system, sorbose subfamily IIB component superfamily GO:0005737|GO:0008982|GO:0009401 GYO_2940 62c0b4601a64e7ebab4bf5aa920b448f 162 TIGRFAM TIGR00854 pts-sorbose: PTS system, mannose/fructose/sorbose family, IIB component 2 152 6.2E-71 T 14-10-2018 IPR018455 Phosphotransferase system, sorbose subfamily IIB component, subgroup GO:0005737|GO:0008982|GO:0009401 GYO_2042 09d71623fa96238c4594b0f5a186173e 242 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 150 169 1.9E-37 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR GYO_2042 09d71623fa96238c4594b0f5a186173e 242 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 171 188 1.9E-37 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR GYO_2042 09d71623fa96238c4594b0f5a186173e 242 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 4 21 1.9E-37 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR GYO_2042 09d71623fa96238c4594b0f5a186173e 242 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 77 88 1.9E-37 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR GYO_2042 09d71623fa96238c4594b0f5a186173e 242 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 124 140 1.9E-37 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR GYO_2042 09d71623fa96238c4594b0f5a186173e 242 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 204 224 1.9E-37 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR GYO_2042 09d71623fa96238c4594b0f5a186173e 242 SUPERFAMILY SSF51735 2 241 9.11E-71 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily GYO_2042 09d71623fa96238c4594b0f5a186173e 242 Gene3D G3DSA:3.40.50.720 1 242 4.0E-70 T 14-10-2018 GYO_2042 09d71623fa96238c4594b0f5a186173e 242 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 77 88 2.5E-5 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR GYO_2042 09d71623fa96238c4594b0f5a186173e 242 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 130 138 2.5E-5 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR GYO_2042 09d71623fa96238c4594b0f5a186173e 242 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 150 169 2.5E-5 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR GYO_2042 09d71623fa96238c4594b0f5a186173e 242 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 9 241 5.8E-52 T 14-10-2018 GYO_1637 cf92c253177b7222f3817f1fa2843ac5 156 SUPERFAMILY SSF53927 2 141 2.17E-46 T 14-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 GYO_1637 cf92c253177b7222f3817f1fa2843ac5 156 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 2 101 3.2E-26 T 14-10-2018 IPR002125 Cytidine and deoxycytidylate deaminase domain GYO_1637 cf92c253177b7222f3817f1fa2843ac5 156 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 53 90 - T 14-10-2018 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 GYO_1637 cf92c253177b7222f3817f1fa2843ac5 156 Gene3D G3DSA:3.40.140.10 1 156 4.4E-70 T 14-10-2018 GYO_0566 357f58ddb7f30f349efe2041bbec362e 408 Gene3D G3DSA:1.20.1250.20 3 203 2.6E-23 T 14-10-2018 GYO_0566 357f58ddb7f30f349efe2041bbec362e 408 Pfam PF07690 Major Facilitator Superfamily 17 359 3.1E-36 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 GYO_0566 357f58ddb7f30f349efe2041bbec362e 408 Gene3D G3DSA:1.20.1250.20 205 406 6.3E-17 T 14-10-2018 GYO_0566 357f58ddb7f30f349efe2041bbec362e 408 SUPERFAMILY SSF103473 4 393 3.14E-52 T 14-10-2018 IPR036259 MFS transporter superfamily GYO_4441 943ba465b7de1301f40c2f32fd85c35f 296 Pfam PF00491 Arginase family 4 291 1.1E-82 T 14-10-2018 IPR006035 Ureohydrolase GO:0046872 GYO_4441 943ba465b7de1301f40c2f32fd85c35f 296 SUPERFAMILY SSF52768 4 294 2.34E-95 T 14-10-2018 IPR023696 Ureohydrolase domain superfamily GYO_4441 943ba465b7de1301f40c2f32fd85c35f 296 PIRSF PIRSF036979 1 294 2.3E-39 T 14-10-2018 IPR006035 Ureohydrolase GO:0046872 GYO_4441 943ba465b7de1301f40c2f32fd85c35f 296 TIGRFAM TIGR01229 rocF_arginase: arginase 6 296 1.3E-124 T 14-10-2018 IPR014033 Arginase GO:0004053|GO:0006525|GO:0046872 KEGG: 00220+3.5.3.1|KEGG: 00330+3.5.3.1|MetaCyc: PWY-31|MetaCyc: PWY-4984|MetaCyc: PWY-6305|MetaCyc: PWY-6922|Reactome: R-HSA-70635 GYO_4441 943ba465b7de1301f40c2f32fd85c35f 296 Gene3D G3DSA:3.40.800.10 2 296 2.4E-115 T 14-10-2018 GYO_4441 943ba465b7de1301f40c2f32fd85c35f 296 ProSitePatterns PS01053 Arginase family signature. 221 242 - T 14-10-2018 IPR020855 Ureohydrolase, manganese-binding site GO:0016813|GO:0046872 GYO_4441 943ba465b7de1301f40c2f32fd85c35f 296 PRINTS PR00116 Arginase signature 218 247 2.6E-44 T 14-10-2018 IPR006035 Ureohydrolase GO:0046872 GYO_4441 943ba465b7de1301f40c2f32fd85c35f 296 PRINTS PR00116 Arginase signature 253 267 2.6E-44 T 14-10-2018 IPR006035 Ureohydrolase GO:0046872 GYO_4441 943ba465b7de1301f40c2f32fd85c35f 296 PRINTS PR00116 Arginase signature 93 108 2.6E-44 T 14-10-2018 IPR006035 Ureohydrolase GO:0046872 GYO_4441 943ba465b7de1301f40c2f32fd85c35f 296 PRINTS PR00116 Arginase signature 116 143 2.6E-44 T 14-10-2018 IPR006035 Ureohydrolase GO:0046872 GYO_4441 943ba465b7de1301f40c2f32fd85c35f 296 PRINTS PR00116 Arginase signature 170 188 2.6E-44 T 14-10-2018 IPR006035 Ureohydrolase GO:0046872 GYO_4303 6eae6a32e4066e0067a88b572cbddb1e 218 Pfam PF01144 Coenzyme A transferase 8 201 1.7E-49 T 14-10-2018 IPR004165 Coenzyme A transferase family I GO:0008410 Reactome: R-HSA-77108 GYO_4303 6eae6a32e4066e0067a88b572cbddb1e 218 SUPERFAMILY SSF100950 4 212 3.29E-74 T 14-10-2018 IPR037171 NagB/RpiA transferase-like GYO_4303 6eae6a32e4066e0067a88b572cbddb1e 218 TIGRFAM TIGR02428 pcaJ_scoB_fam: 3-oxoacid CoA-transferase, B subunit 4 208 1.6E-97 T 14-10-2018 IPR012791 3-oxoacid CoA-transferase, subunit B GO:0008410 Reactome: R-HSA-77108 GYO_4303 6eae6a32e4066e0067a88b572cbddb1e 218 SMART SM00882 6 202 1.2E-78 T 14-10-2018 IPR004165 Coenzyme A transferase family I GO:0008410 Reactome: R-HSA-77108 GYO_4303 6eae6a32e4066e0067a88b572cbddb1e 218 ProSitePatterns PS01274 Coenzyme A transferases signature 2. 44 52 - T 14-10-2018 IPR004164 Coenzyme A transferase active site GO:0008410 Reactome: R-HSA-77108 GYO_4303 6eae6a32e4066e0067a88b572cbddb1e 218 Gene3D G3DSA:3.40.1080.10 1 216 2.8E-108 T 14-10-2018 GYO_0866 7659a13e86a9ec574d293d9e4d3a32f0 94 Pfam PF00166 Chaperonin 10 Kd subunit 2 93 3.7E-36 T 14-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 GYO_0866 7659a13e86a9ec574d293d9e4d3a32f0 94 Gene3D G3DSA:2.30.33.40 1 93 1.5E-38 T 14-10-2018 IPR037124 GroES chaperonin superfamily GO:0005737|GO:0006457 GYO_0866 7659a13e86a9ec574d293d9e4d3a32f0 94 SMART SM00883 1 93 6.3E-56 T 14-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 GYO_0866 7659a13e86a9ec574d293d9e4d3a32f0 94 PRINTS PR00297 10kDa chaperonin signature 59 71 3.5E-33 T 14-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 GYO_0866 7659a13e86a9ec574d293d9e4d3a32f0 94 PRINTS PR00297 10kDa chaperonin signature 80 93 3.5E-33 T 14-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 GYO_0866 7659a13e86a9ec574d293d9e4d3a32f0 94 PRINTS PR00297 10kDa chaperonin signature 2 17 3.5E-33 T 14-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 GYO_0866 7659a13e86a9ec574d293d9e4d3a32f0 94 PRINTS PR00297 10kDa chaperonin signature 24 45 3.5E-33 T 14-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 GYO_0866 7659a13e86a9ec574d293d9e4d3a32f0 94 Hamap MF_00580 10 kDa chaperonin [groS]. 1 94 27.025 T 14-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 GYO_0866 7659a13e86a9ec574d293d9e4d3a32f0 94 ProSitePatterns PS00681 Chaperonins cpn10 signature. 2 26 - T 14-10-2018 IPR018369 Chaperonin GroES, conserved site GO:0005524|GO:0006457 GYO_0866 7659a13e86a9ec574d293d9e4d3a32f0 94 SUPERFAMILY SSF50129 2 93 1.41E-34 T 14-10-2018 IPR011032 GroES-like superfamily GYO_3507 c87a25a5b04b6d1acc789b5135735d9f 172 Pfam PF00583 Acetyltransferase (GNAT) family 28 147 7.1E-19 T 14-10-2018 IPR000182 GNAT domain GYO_3507 c87a25a5b04b6d1acc789b5135735d9f 172 SUPERFAMILY SSF55729 1 161 4.39E-34 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase GYO_3507 c87a25a5b04b6d1acc789b5135735d9f 172 Gene3D G3DSA:3.40.630.30 1 171 5.8E-52 T 14-10-2018 GYO_0905 43d0c835dcca797fccd9fd1cd064f4de 241 SUPERFAMILY SSF56104 2 238 1.47E-84 T 14-10-2018 GYO_0905 43d0c835dcca797fccd9fd1cd064f4de 241 Hamap MF_00137 Phosphoribosylaminoimidazole-succinocarboxamide synthase [purC]. 6 237 34.052 T 14-10-2018 IPR028923 SAICAR synthetase/ADE2, N-terminal KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 GYO_0905 43d0c835dcca797fccd9fd1cd064f4de 241 TIGRFAM TIGR00081 purC: phosphoribosylaminoimidazolesuccinocarboxamide synthase 5 240 1.9E-88 T 14-10-2018 IPR001636 Phosphoribosylaminoimidazole-succinocarboxamide synthase GO:0004639|GO:0006164 KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234 GYO_0905 43d0c835dcca797fccd9fd1cd064f4de 241 ProSitePatterns PS01057 SAICAR synthetase signature 1. 88 102 - T 14-10-2018 IPR018236 SAICAR synthetase, conserved site GO:0004639|GO:0006164 KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 GYO_0905 43d0c835dcca797fccd9fd1cd064f4de 241 Pfam PF01259 SAICAR synthetase 9 233 1.3E-69 T 14-10-2018 IPR028923 SAICAR synthetase/ADE2, N-terminal KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 GYO_0905 43d0c835dcca797fccd9fd1cd064f4de 241 ProSitePatterns PS01058 SAICAR synthetase signature 2. 175 183 - T 14-10-2018 IPR018236 SAICAR synthetase, conserved site GO:0004639|GO:0006164 KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 GYO_0905 43d0c835dcca797fccd9fd1cd064f4de 241 Gene3D G3DSA:3.30.470.20 87 223 9.8E-98 T 14-10-2018 GYO_0905 43d0c835dcca797fccd9fd1cd064f4de 241 Gene3D G3DSA:3.30.200.20 9 234 9.8E-98 T 14-10-2018 GYO_4044 84499c3b65383c24155807906d90ced4 224 SUPERFAMILY SSF53300 25 221 2.23E-24 T 14-10-2018 IPR036465 von Willebrand factor A-like domain superfamily GYO_4044 84499c3b65383c24155807906d90ced4 224 Gene3D G3DSA:3.40.50.410 25 224 1.7E-28 T 14-10-2018 IPR036465 von Willebrand factor A-like domain superfamily GYO_4044 84499c3b65383c24155807906d90ced4 224 Pfam PF00092 von Willebrand factor type A domain 31 212 1.1E-12 T 14-10-2018 IPR002035 von Willebrand factor, type A GYO_4044 84499c3b65383c24155807906d90ced4 224 SMART SM00327 29 222 1.0E-15 T 14-10-2018 IPR002035 von Willebrand factor, type A GYO_0959 fb154611be231ae1e6a7071310560b5e 296 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 114 290 4.0E-19 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 GYO_0959 fb154611be231ae1e6a7071310560b5e 296 SUPERFAMILY SSF161098 23 296 8.6E-69 T 14-10-2018 IPR035906 MetI-like superfamily GYO_0959 fb154611be231ae1e6a7071310560b5e 296 Gene3D G3DSA:1.10.3720.10 17 288 2.7E-64 T 14-10-2018 IPR035906 MetI-like superfamily GYO_4263 3e9f3dd6402682dc06bc6b7282fca2c8 196 TIGRFAM TIGR00567 3mg: DNA-3-methyladenine glycosylase 8 195 8.6E-83 T 14-10-2018 IPR003180 Methylpurine-DNA glycosylase GO:0003677|GO:0003905|GO:0006284 Reactome: R-HSA-110330|Reactome: R-HSA-110331|Reactome: R-HSA-110357 GYO_4263 3e9f3dd6402682dc06bc6b7282fca2c8 196 Hamap MF_00527 Putative 3-methyladenine DNA glycosylase. 10 195 33.976 T 14-10-2018 IPR003180 Methylpurine-DNA glycosylase GO:0003677|GO:0003905|GO:0006284 Reactome: R-HSA-110330|Reactome: R-HSA-110331|Reactome: R-HSA-110357 GYO_4263 3e9f3dd6402682dc06bc6b7282fca2c8 196 Gene3D G3DSA:3.10.300.10 3 196 3.8E-63 T 14-10-2018 IPR036995 Methylpurine-DNA glycosylase superfamily GO:0003677|GO:0003905|GO:0006284 Reactome: R-HSA-110330|Reactome: R-HSA-110331|Reactome: R-HSA-110357 GYO_4263 3e9f3dd6402682dc06bc6b7282fca2c8 196 Pfam PF02245 Methylpurine-DNA glycosylase (MPG) 12 192 6.0E-60 T 14-10-2018 IPR003180 Methylpurine-DNA glycosylase GO:0003677|GO:0003905|GO:0006284 Reactome: R-HSA-110330|Reactome: R-HSA-110331|Reactome: R-HSA-110357 GYO_4263 3e9f3dd6402682dc06bc6b7282fca2c8 196 SUPERFAMILY SSF50486 6 196 1.26E-63 T 14-10-2018 IPR011034 Formyl transferase-like, C-terminal domain superfamily GO:0003824 GYO_0658 0e77e6caf253c1c5d1c837590b22244c 272 Pfam PF12787 EcsC protein family 10 260 3.4E-85 T 14-10-2018 IPR024787 EcsC protein GYO_0658 0e77e6caf253c1c5d1c837590b22244c 272 ProDom PD038378 ECSC YDBA CC1715 BH1193 ECSC-LIKE ESCC 10 263 3.0E-72 T 14-10-2018 GYO_0963 3dbd6f24f745ee476bee1490cc3aaf97 220 Pfam PF09224 Domain of unknown function (DUF1961) 7 214 6.9E-104 T 14-10-2018 IPR015305 Protein of unknown function DUF1961 GYO_0963 3dbd6f24f745ee476bee1490cc3aaf97 220 Gene3D G3DSA:2.60.120.200 1 220 7.5E-102 T 14-10-2018 GYO_0963 3dbd6f24f745ee476bee1490cc3aaf97 220 SUPERFAMILY SSF49899 1 220 1.19E-123 T 14-10-2018 IPR013320 Concanavalin A-like lectin/glucanase domain superfamily GYO_0963 3dbd6f24f745ee476bee1490cc3aaf97 220 ProDom PD113327 YESU 3D-STRUCTURE 6 220 3.0E-110 T 14-10-2018 IPR015305 Protein of unknown function DUF1961 GYO_2361 1912f56686fd6409c38ed34b27c7c0c6 306 SUPERFAMILY SSF54593 1 280 4.75E-44 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase GYO_2361 1912f56686fd6409c38ed34b27c7c0c6 306 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 5 266 1.5E-35 T 14-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain GYO_2361 1912f56686fd6409c38ed34b27c7c0c6 306 Gene3D G3DSA:3.10.180.10 5 301 5.0E-110 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase GYO_2361 1912f56686fd6409c38ed34b27c7c0c6 306 Gene3D G3DSA:3.10.180.10 65 211 5.0E-110 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase GYO_1391 f88cc8168aad65cc9dd29bbedc0fb856 342 SUPERFAMILY SSF51735 4 153 1.35E-47 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily GYO_1391 f88cc8168aad65cc9dd29bbedc0fb856 342 Gene3D G3DSA:3.30.360.10 126 319 2.0E-103 T 14-10-2018 GYO_1391 f88cc8168aad65cc9dd29bbedc0fb856 342 Pfam PF02894 Oxidoreductase family, C-terminal alpha/beta domain 137 244 5.2E-16 T 14-10-2018 IPR004104 Oxidoreductase, C-terminal GO:0016491|GO:0055114 GYO_1391 f88cc8168aad65cc9dd29bbedc0fb856 342 SUPERFAMILY SSF55347 130 304 3.27E-32 T 14-10-2018 GYO_1391 f88cc8168aad65cc9dd29bbedc0fb856 342 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 5 125 4.5E-32 T 14-10-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 GYO_1391 f88cc8168aad65cc9dd29bbedc0fb856 342 Gene3D G3DSA:3.40.50.720 5 306 2.0E-103 T 14-10-2018 GYO_2540 fd131b6ea9fed6ac57a1e521e475d9d3 255 Gene3D G3DSA:3.20.20.70 1 254 8.0E-91 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 GYO_2540 fd131b6ea9fed6ac57a1e521e475d9d3 255 TIGRFAM TIGR01093 aroD: 3-dehydroquinate dehydratase, type I 17 245 9.7E-75 T 14-10-2018 IPR001381 3-dehydroquinate dehydratase type I GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 GYO_2540 fd131b6ea9fed6ac57a1e521e475d9d3 255 ProSitePatterns PS01028 Dehydroquinase class I active site. 114 144 - T 14-10-2018 IPR018508 3-dehydroquinate dehydratase, active site GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 GYO_2540 fd131b6ea9fed6ac57a1e521e475d9d3 255 Pfam PF01487 Type I 3-dehydroquinase 20 246 1.9E-68 T 14-10-2018 IPR001381 3-dehydroquinate dehydratase type I GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 GYO_2540 fd131b6ea9fed6ac57a1e521e475d9d3 255 SUPERFAMILY SSF51569 2 250 5.86E-80 T 14-10-2018 GYO_2540 fd131b6ea9fed6ac57a1e521e475d9d3 255 Hamap MF_00214 3-dehydroquinate dehydratase [aroD]. 17 249 42.276 T 14-10-2018 IPR001381 3-dehydroquinate dehydratase type I GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 GYO_4058 f9dacf31e9200e3df38528a7397b5086 181 Pfam PF00213 ATP synthase delta (OSCP) subunit 6 176 1.0E-50 T 14-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 GYO_4058 f9dacf31e9200e3df38528a7397b5086 181 TIGRFAM TIGR01145 ATP_synt_delta: ATP synthase F1, delta subunit 6 176 1.6E-61 T 14-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 GYO_4058 f9dacf31e9200e3df38528a7397b5086 181 Gene3D G3DSA:1.10.520.20 3 106 4.5E-14 T 14-10-2018 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 GYO_4058 f9dacf31e9200e3df38528a7397b5086 181 PRINTS PR00125 ATP synthase delta subunit signature 6 25 7.8E-27 T 14-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 GYO_4058 f9dacf31e9200e3df38528a7397b5086 181 PRINTS PR00125 ATP synthase delta subunit signature 85 99 7.8E-27 T 14-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 GYO_4058 f9dacf31e9200e3df38528a7397b5086 181 PRINTS PR00125 ATP synthase delta subunit signature 151 169 7.8E-27 T 14-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 GYO_4058 f9dacf31e9200e3df38528a7397b5086 181 PRINTS PR00125 ATP synthase delta subunit signature 74 85 7.8E-27 T 14-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 GYO_4058 f9dacf31e9200e3df38528a7397b5086 181 PRINTS PR00125 ATP synthase delta subunit signature 136 151 7.8E-27 T 14-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 GYO_4058 f9dacf31e9200e3df38528a7397b5086 181 SUPERFAMILY SSF47928 4 105 2.48E-25 T 14-10-2018 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 GYO_4058 f9dacf31e9200e3df38528a7397b5086 181 ProSitePatterns PS00389 ATP synthase delta (OSCP) subunit signature. 138 157 - T 14-10-2018 IPR020781 ATPase, OSCP/delta subunit, conserved site GO:0015986|GO:0016020|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 GYO_4058 f9dacf31e9200e3df38528a7397b5086 181 Hamap MF_01416 ATP synthase subunit delta [atpD]. 2 178 20.202 T 14-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 GYO_1306 24e00d6ebcb086be362dac2dec85b396 714 Gene3D G3DSA:1.10.3810.10 66 256 6.4E-194 T 14-10-2018 IPR036950 Penicillin binding protein transglycosylase domain KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 GYO_1306 24e00d6ebcb086be362dac2dec85b396 714 Gene3D G3DSA:3.40.710.10 296 607 6.4E-194 T 14-10-2018 GYO_1306 24e00d6ebcb086be362dac2dec85b396 714 SUPERFAMILY SSF56601 212 612 4.47E-102 T 14-10-2018 IPR012338 Beta-lactamase/transpeptidase-like GYO_1306 24e00d6ebcb086be362dac2dec85b396 714 Pfam PF00905 Penicillin binding protein transpeptidase domain 322 594 2.2E-50 T 14-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 GYO_1306 24e00d6ebcb086be362dac2dec85b396 714 SUPERFAMILY SSF53955 45 254 1.35E-74 T 14-10-2018 IPR023346 Lysozyme-like domain superfamily GYO_1306 24e00d6ebcb086be362dac2dec85b396 714 Pfam PF00912 Transglycosylase 57 230 2.3E-65 T 14-10-2018 IPR001264 Glycosyl transferase, family 51 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 GYO_1306 24e00d6ebcb086be362dac2dec85b396 714 Gene3D G3DSA:3.90.1310.20 51 504 6.4E-194 T 14-10-2018 GYO_1306 24e00d6ebcb086be362dac2dec85b396 714 TIGRFAM TIGR02074 PBP_1a_fam: penicillin-binding protein, 1A family 66 597 1.5E-181 T 14-10-2018 GYO_1269 c4178c297e8a9d06f82150c89be1b6d6 453 SUPERFAMILY SSF56059 191 423 1.59E-15 T 14-10-2018 GYO_1269 c4178c297e8a9d06f82150c89be1b6d6 453 Pfam PF14398 YheC/D like ATP-grasp 185 439 9.6E-81 T 14-10-2018 IPR026838 Endospore coat-associated protein YheC/D GYO_1269 c4178c297e8a9d06f82150c89be1b6d6 453 Gene3D G3DSA:3.30.470.20 307 430 6.0E-5 T 14-10-2018 GYO_0398 1d4c1de18313463120debd3f58691e14 267 Gene3D G3DSA:3.40.710.10 31 267 3.7E-98 T 14-10-2018 GYO_0398 1d4c1de18313463120debd3f58691e14 267 Pfam PF00905 Penicillin binding protein transpeptidase domain 63 256 3.9E-34 T 14-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 GYO_0398 1d4c1de18313463120debd3f58691e14 267 ProSitePatterns PS00337 Beta-lactamase class-D active site. 74 84 - T 14-10-2018 IPR002137 Beta-lactamase, class-D active site GO:0008800|GO:0017001 KEGG: 00311+3.5.2.6 GYO_0398 1d4c1de18313463120debd3f58691e14 267 SUPERFAMILY SSF56601 47 260 4.0E-35 T 14-10-2018 IPR012338 Beta-lactamase/transpeptidase-like GYO_3112 86ad461e66b6f0e896bf5288f127460f 248 Pfam PF00588 SpoU rRNA Methylase family 106 244 5.3E-35 T 14-10-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 GYO_3112 86ad461e66b6f0e896bf5288f127460f 248 Gene3D G3DSA:3.40.1280.10 97 248 1.3E-48 T 14-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal GYO_3112 86ad461e66b6f0e896bf5288f127460f 248 Gene3D G3DSA:3.30.1330.30 2 96 3.9E-25 T 14-10-2018 IPR029064 50S ribosomal protein L30e-like GYO_3112 86ad461e66b6f0e896bf5288f127460f 248 Pfam PF08032 RNA 2'-O ribose methyltransferase substrate binding 31 98 4.6E-9 T 14-10-2018 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 Reactome: R-HSA-6793080 GYO_3112 86ad461e66b6f0e896bf5288f127460f 248 SMART SM00967 31 99 1.9E-11 T 14-10-2018 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 Reactome: R-HSA-6793080 GYO_3112 86ad461e66b6f0e896bf5288f127460f 248 SUPERFAMILY SSF75217 98 247 1.18E-39 T 14-10-2018 IPR029028 Alpha/beta knot methyltransferases GYO_3112 86ad461e66b6f0e896bf5288f127460f 248 SUPERFAMILY SSF55315 2 97 4.0E-23 T 14-10-2018 IPR029064 50S ribosomal protein L30e-like GYO_1768 69b9ad8ad3e75405906a9a97104bd983 594 ProSitePatterns PS00211 ABC transporters family signature. 482 496 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 GYO_1768 69b9ad8ad3e75405906a9a97104bd983 594 Pfam PF00664 ABC transporter transmembrane region 30 297 1.8E-49 T 14-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 GYO_1768 69b9ad8ad3e75405906a9a97104bd983 594 SUPERFAMILY SSF52540 335 581 3.55E-90 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase GYO_1768 69b9ad8ad3e75405906a9a97104bd983 594 SMART SM00382 370 556 2.9E-13 T 14-10-2018 IPR003593 AAA+ ATPase domain GYO_1768 69b9ad8ad3e75405906a9a97104bd983 594 Pfam PF00005 ABC transporter 362 510 2.4E-32 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 GYO_1768 69b9ad8ad3e75405906a9a97104bd983 594 Gene3D G3DSA:3.40.50.300 330 582 1.4E-87 T 14-10-2018 GYO_1768 69b9ad8ad3e75405906a9a97104bd983 594 Gene3D G3DSA:1.20.1560.10 6 329 3.5E-90 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 GYO_1768 69b9ad8ad3e75405906a9a97104bd983 594 SUPERFAMILY SSF90123 14 326 3.66E-82 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 GYO_2592 193653cc7afa6eecf8324fe4a173f59b 468 Pfam PF03553 Na+/H+ antiporter family 159 451 2.7E-70 T 14-10-2018 IPR018461 Na+/H+ antiporter, NhaC-like, C-terminal GO:0016021 GYO_2592 193653cc7afa6eecf8324fe4a173f59b 468 TIGRFAM TIGR00931 antiport_nhaC: Na+/H+ antiporter NhaC 5 458 3.7E-220 T 14-10-2018 IPR004770 Na+/H+ antiporter NhaC GO:0015297|GO:0016021 GYO_1858 71149fda4dc39bfdfbf9ab3dac2b0b86 539 PIRSF PIRSF012535 1 539 2.3E-237 T 14-10-2018 IPR011199 Bacillithiol biosynthesis BshC GYO_1858 71149fda4dc39bfdfbf9ab3dac2b0b86 539 Hamap MF_01867 Putative cysteine ligase BshC [bshC]. 1 539 32.281 T 14-10-2018 IPR011199 Bacillithiol biosynthesis BshC GYO_1858 71149fda4dc39bfdfbf9ab3dac2b0b86 539 TIGRFAM TIGR03998 thiol_BshC: bacillithiol biosynthesis cysteine-adding enzyme BshC 11 537 9.9E-199 T 14-10-2018 IPR011199 Bacillithiol biosynthesis BshC GYO_1858 71149fda4dc39bfdfbf9ab3dac2b0b86 539 Pfam PF10079 Bacillithiol biosynthesis BshC 1 536 7.9E-174 T 14-10-2018 IPR011199 Bacillithiol biosynthesis BshC GYO_2110 a0336dc32efa73773cdb47f1436aa516 126 ProDom PD015812 YOPD YWLA YOAG 22 119 8.0E-6 T 14-10-2018 IPR031374 Uncharacterised protein family UPF0715 GYO_2110 a0336dc32efa73773cdb47f1436aa516 126 Pfam PF17094 Uncharacterised protein family (UPF0715) 10 118 1.8E-22 T 14-10-2018 IPR031374 Uncharacterised protein family UPF0715 GYO_4469 0debc7a9f2705950d88337d598517de2 659 PIRSF PIRSF026583 1 659 4.6E-277 T 14-10-2018 IPR014528 Cyclic-di-AMP phosphodiesterase GdpP/PdeA GYO_4469 0debc7a9f2705950d88337d598517de2 659 Gene3D G3DSA:3.30.450.20 53 161 4.4E-35 T 14-10-2018 GYO_4469 0debc7a9f2705950d88337d598517de2 659 SUPERFAMILY SSF64182 339 644 1.83E-67 T 14-10-2018 IPR038763 DHH phosphoesterase superfamily GYO_4469 0debc7a9f2705950d88337d598517de2 659 SMART SM00267 132 299 3.1E-15 T 14-10-2018 IPR000160 GGDEF domain GYO_4469 0debc7a9f2705950d88337d598517de2 659 Pfam PF02272 DHHA1 domain 518 649 4.2E-15 T 14-10-2018 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7|Reactome: R-HSA-379716 GYO_4469 0debc7a9f2705950d88337d598517de2 659 Gene3D G3DSA:3.10.310.30 542 655 1.2E-8 T 14-10-2018 GYO_4469 0debc7a9f2705950d88337d598517de2 659 Pfam PF01368 DHH family 339 496 1.0E-21 T 14-10-2018 IPR001667 DDH domain KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 GYO_4469 0debc7a9f2705950d88337d598517de2 659 Gene3D G3DSA:3.90.1640.10 322 541 7.5E-54 T 14-10-2018 GYO_4097 bd4dbd6e4a92d19a49224efcb0be8630 705 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 371 382 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site GYO_4097 bd4dbd6e4a92d19a49224efcb0be8630 705 SUPERFAMILY SSF103501 8 241 8.37E-17 T 14-10-2018 IPR036197 NarG-like superfamily GYO_4097 bd4dbd6e4a92d19a49224efcb0be8630 705 Pfam PF13183 4Fe-4S dicluster domain 274 383 2.7E-12 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain GYO_4097 bd4dbd6e4a92d19a49224efcb0be8630 705 Pfam PF02754 Cysteine-rich domain 581 668 8.0E-19 T 14-10-2018 IPR004017 Cysteine-rich domain GYO_4097 bd4dbd6e4a92d19a49224efcb0be8630 705 Pfam PF02754 Cysteine-rich domain 459 537 2.1E-5 T 14-10-2018 IPR004017 Cysteine-rich domain GYO_4097 bd4dbd6e4a92d19a49224efcb0be8630 705 SUPERFAMILY SSF46548 233 399 6.1E-20 T 14-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 GYO_2380 2c94d7b86ed8c83b096746389af3cdba 217 SUPERFAMILY SSF100950 7 215 4.19E-66 T 14-10-2018 IPR037171 NagB/RpiA transferase-like GYO_2380 2c94d7b86ed8c83b096746389af3cdba 217 SMART SM00882 9 205 2.6E-62 T 14-10-2018 IPR004165 Coenzyme A transferase family I GO:0008410 Reactome: R-HSA-77108 GYO_2380 2c94d7b86ed8c83b096746389af3cdba 217 Pfam PF01144 Coenzyme A transferase 9 203 6.8E-37 T 14-10-2018 IPR004165 Coenzyme A transferase family I GO:0008410 Reactome: R-HSA-77108 GYO_2380 2c94d7b86ed8c83b096746389af3cdba 217 TIGRFAM TIGR02428 pcaJ_scoB_fam: 3-oxoacid CoA-transferase, B subunit 7 212 8.5E-92 T 14-10-2018 IPR012791 3-oxoacid CoA-transferase, subunit B GO:0008410 Reactome: R-HSA-77108 GYO_2380 2c94d7b86ed8c83b096746389af3cdba 217 Gene3D G3DSA:3.40.1080.10 5 215 8.1E-89 T 14-10-2018 GYO_2811 9cef5a7fa75f005ed31b5e6a2c1d667c 451 TIGRFAM TIGR01579 MiaB-like-C: MiaB-like tRNA modifying enzyme 6 423 3.5E-142 T 14-10-2018 IPR006467 MiaB-like tRNA modifying enzyme GO:0016740 GYO_2811 9cef5a7fa75f005ed31b5e6a2c1d667c 451 ProSitePatterns PS01278 Methylthiotransferase radical SAM domain signature. 147 167 - T 14-10-2018 IPR020612 Methylthiotransferase, conserved site GO:0051539 GYO_2811 9cef5a7fa75f005ed31b5e6a2c1d667c 451 Pfam PF04055 Radical SAM superfamily 149 319 1.0E-29 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 GYO_2811 9cef5a7fa75f005ed31b5e6a2c1d667c 451 SMART SM00729 143 361 1.5E-61 T 14-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 GYO_2811 9cef5a7fa75f005ed31b5e6a2c1d667c 451 SUPERFAMILY SSF102114 119 365 1.7E-59 T 14-10-2018 GYO_2811 9cef5a7fa75f005ed31b5e6a2c1d667c 451 Pfam PF01938 TRAM domain 393 433 1.0E-5 T 14-10-2018 IPR002792 TRAM domain GYO_2811 9cef5a7fa75f005ed31b5e6a2c1d667c 451 Gene3D G3DSA:3.80.30.20 140 375 1.1E-87 T 14-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe GYO_2811 9cef5a7fa75f005ed31b5e6a2c1d667c 451 TIGRFAM TIGR00089 TIGR00089: radical SAM methylthiotransferase, MiaB/RimO family 3 431 2.0E-154 T 14-10-2018 IPR005839 Methylthiotransferase GO:0006400|GO:0016740|GO:0051539 GYO_2811 9cef5a7fa75f005ed31b5e6a2c1d667c 451 Pfam PF00919 Uncharacterized protein family UPF0004 4 98 5.0E-26 T 14-10-2018 IPR013848 Methylthiotransferase, N-terminal GO:0051539 GYO_2811 9cef5a7fa75f005ed31b5e6a2c1d667c 451 Gene3D G3DSA:3.40.50.12160 3 134 1.7E-24 T 14-10-2018 IPR038135 Methylthiotransferase, N-terminal domain superfamily GYO_3859 54c488ae61d68a602b18938dfee964d1 831 Pfam PF00391 PEP-utilising enzyme, mobile domain 751 823 2.9E-25 T 14-10-2018 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 GYO_3859 54c488ae61d68a602b18938dfee964d1 831 Gene3D G3DSA:3.30.470.20 163 313 3.8E-45 T 14-10-2018 GYO_3859 54c488ae61d68a602b18938dfee964d1 831 Gene3D G3DSA:3.50.30.10 725 830 6.1E-36 T 14-10-2018 GYO_3859 54c488ae61d68a602b18938dfee964d1 831 Gene3D G3DSA:3.30.1490.20 3 162 3.0E-41 T 14-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 GYO_3859 54c488ae61d68a602b18938dfee964d1 831 SUPERFAMILY SSF52009 726 826 1.16E-29 T 14-10-2018 IPR036637 Phosphohistidine domain superfamily GO:0016310|GO:0016772 GYO_3859 54c488ae61d68a602b18938dfee964d1 831 Pfam PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain 14 303 4.8E-80 T 14-10-2018 IPR002192 Pyruvate phosphate dikinase, PEP/pyruvate-binding GO:0005524|GO:0016301|GO:0016310 GYO_3859 54c488ae61d68a602b18938dfee964d1 831 SUPERFAMILY SSF56059 13 296 2.94E-74 T 14-10-2018 GYO_1390 66e00ee09b7b862d233d9913fb7d8d4b 340 Pfam PF00356 Bacterial regulatory proteins, lacI family 4 49 2.4E-22 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 GYO_1390 66e00ee09b7b862d233d9913fb7d8d4b 340 Gene3D G3DSA:3.40.50.2300 164 329 3.7E-87 T 14-10-2018 GYO_1390 66e00ee09b7b862d233d9913fb7d8d4b 340 SUPERFAMILY SSF53822 62 334 8.33E-84 T 14-10-2018 IPR028082 Periplasmic binding protein-like I GYO_1390 66e00ee09b7b862d233d9913fb7d8d4b 340 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 14 24 1.4E-6 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 GYO_1390 66e00ee09b7b862d233d9913fb7d8d4b 340 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 4 14 1.4E-6 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 GYO_1390 66e00ee09b7b862d233d9913fb7d8d4b 340 Gene3D G3DSA:1.10.260.40 1 59 1.5E-23 T 14-10-2018 GYO_1390 66e00ee09b7b862d233d9913fb7d8d4b 340 ProSitePatterns PS00356 LacI-type HTH domain signature. 5 23 - T 14-10-2018 GYO_1390 66e00ee09b7b862d233d9913fb7d8d4b 340 SUPERFAMILY SSF47413 2 61 1.36E-18 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 GYO_1390 66e00ee09b7b862d233d9913fb7d8d4b 340 Gene3D G3DSA:3.40.50.2300 63 324 3.7E-87 T 14-10-2018 GYO_1390 66e00ee09b7b862d233d9913fb7d8d4b 340 Pfam PF13377 Periplasmic binding protein-like domain 173 332 6.7E-46 T 14-10-2018 GYO_1390 66e00ee09b7b862d233d9913fb7d8d4b 340 SMART SM00354 2 72 4.1E-37 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 GYO_2810 430e860ee5e6d12bbdcc41d0fbc9b8e5 307 TIGRFAM TIGR00704 NaPi_cotrn_rel: Na/Pi-cotransporter II-related protein 1 307 9.4E-141 T 14-10-2018 IPR004633 Na/Pi-cotransporter II-related/YqeW-like protein GO:0016020 GYO_2810 430e860ee5e6d12bbdcc41d0fbc9b8e5 307 Pfam PF02690 Na+/Pi-cotransporter 161 253 3.8E-18 T 14-10-2018 IPR003841 Sodium-dependent phosphate transport protein GO:0015321|GO:0016020|GO:0044341 Reactome: R-HSA-427589 GYO_2810 430e860ee5e6d12bbdcc41d0fbc9b8e5 307 Pfam PF02690 Na+/Pi-cotransporter 13 146 3.0E-32 T 14-10-2018 IPR003841 Sodium-dependent phosphate transport protein GO:0015321|GO:0016020|GO:0044341 Reactome: R-HSA-427589 GYO_0912 59b69c50a611f61966f80c67ccfe99f7 512 Gene3D G3DSA:3.40.140.20 204 362 4.6E-60 T 14-10-2018 IPR024051 AICAR transformylase, duplicated domain superfamily KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 GYO_0912 59b69c50a611f61966f80c67ccfe99f7 512 Gene3D G3DSA:3.40.140.20 387 512 1.8E-57 T 14-10-2018 IPR024051 AICAR transformylase, duplicated domain superfamily KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 GYO_0912 59b69c50a611f61966f80c67ccfe99f7 512 Hamap MF_00139 Bifunctional purine biosynthesis protein PurH [purH]. 3 512 45.166 T 14-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 GYO_0912 59b69c50a611f61966f80c67ccfe99f7 512 TIGRFAM TIGR00355 purH: phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase 4 512 4.7E-261 T 14-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 GYO_0912 59b69c50a611f61966f80c67ccfe99f7 512 SMART SM00851 15 130 1.6E-54 T 14-10-2018 IPR011607 Methylglyoxal synthase-like domain GYO_0912 59b69c50a611f61966f80c67ccfe99f7 512 Gene3D G3DSA:3.40.50.1380 1 198 1.9E-88 T 14-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily GYO_0912 59b69c50a611f61966f80c67ccfe99f7 512 SUPERFAMILY SSF52335 3 195 4.58E-71 T 14-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily GYO_0912 59b69c50a611f61966f80c67ccfe99f7 512 PIRSF PIRSF000414 1 512 4.8E-216 T 14-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 GYO_0912 59b69c50a611f61966f80c67ccfe99f7 512 SUPERFAMILY SSF53927 208 512 6.12E-128 T 14-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 GYO_0912 59b69c50a611f61966f80c67ccfe99f7 512 Pfam PF01808 AICARFT/IMPCHase bienzyme 135 446 1.5E-121 T 14-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 GYO_0912 59b69c50a611f61966f80c67ccfe99f7 512 SMART SM00798 135 447 3.3E-202 T 14-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 GYO_0912 59b69c50a611f61966f80c67ccfe99f7 512 Pfam PF02142 MGS-like domain 16 129 3.3E-29 T 14-10-2018 IPR011607 Methylglyoxal synthase-like domain GYO_1762 74d811f49715b19663a20b7303a7a866 199 SUPERFAMILY SSF53448 5 186 4.28E-22 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases GYO_1762 74d811f49715b19663a20b7303a7a866 199 Hamap MF_00316 Molybdenum cofactor guanylyltransferase [mobA]. 1 189 22.861 T 14-10-2018 IPR013482 Molybdenum cofactor guanylyltransferase GO:0003824|GO:0006777 KEGG: 00790+2.7.7.77|MetaCyc: PWY-5964|MetaCyc: PWY-7639 GYO_1762 74d811f49715b19663a20b7303a7a866 199 Gene3D G3DSA:3.90.550.10 6 197 1.4E-41 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases GYO_1762 74d811f49715b19663a20b7303a7a866 199 Pfam PF12804 MobA-like NTP transferase domain 6 150 1.0E-23 T 14-10-2018 IPR025877 MobA-like NTP transferase GYO_2383 22ef48a6952f7fdc53d5c4aafb06b8c1 37 Pfam PF09680 Protein of unknown function (Tiny_TM_bacill) 14 36 3.3E-11 T 14-10-2018 IPR010070 Sporulation protein YjcZ-like GYO_2383 22ef48a6952f7fdc53d5c4aafb06b8c1 37 TIGRFAM TIGR01732 tiny_TM_bacill: conserved hypothetical protein 13 36 2.4E-13 T 14-10-2018 IPR010070 Sporulation protein YjcZ-like GYO_0183 390001a98909599a623b639ffeefe14e 198 PIRSF PIRSF029886 1 198 1.4E-81 T 14-10-2018 IPR024164 KinB-signalling pathway activation protein GO:0045881 GYO_0183 390001a98909599a623b639ffeefe14e 198 Pfam PF14089 KinB-signalling pathway activation in sporulation 17 195 5.0E-75 T 14-10-2018 IPR024164 KinB-signalling pathway activation protein GO:0045881 GYO_0183 390001a98909599a623b639ffeefe14e 198 SMART SM01251 17 196 1.0E-115 T 14-10-2018 IPR024164 KinB-signalling pathway activation protein GO:0045881 GYO_0679 1e51e16c267014b3eb1a494805a6f0ce 494 Gene3D G3DSA:3.40.50.300 2 208 1.3E-76 T 14-10-2018 GYO_0679 1e51e16c267014b3eb1a494805a6f0ce 494 SUPERFAMILY SSF52540 71 358 1.36E-75 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase GYO_0679 1e51e16c267014b3eb1a494805a6f0ce 494 Hamap MF_01493 DEAD-box ATP-dependent RNA helicase CshA [cshA]. 3 494 46.186 T 14-10-2018 IPR030880 DEAD-box ATP-dependent RNA helicase CshA GO:0004004|GO:0005524|GO:0010501 GYO_0679 1e51e16c267014b3eb1a494805a6f0ce 494 Gene3D G3DSA:3.40.50.300 211 440 1.0E-53 T 14-10-2018 GYO_0679 1e51e16c267014b3eb1a494805a6f0ce 494 Pfam PF00270 DEAD/DEAH box helicase 27 192 1.0E-49 T 14-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 GYO_0679 1e51e16c267014b3eb1a494805a6f0ce 494 SMART SM00487 22 219 7.4E-66 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain GYO_0679 1e51e16c267014b3eb1a494805a6f0ce 494 Pfam PF00271 Helicase conserved C-terminal domain 228 336 2.6E-28 T 14-10-2018 IPR001650 Helicase, C-terminal GYO_0679 1e51e16c267014b3eb1a494805a6f0ce 494 SMART SM00490 255 336 3.2E-34 T 14-10-2018 IPR001650 Helicase, C-terminal GYO_0679 1e51e16c267014b3eb1a494805a6f0ce 494 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 150 158 - T 14-10-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site GYO_1343 a63c7cdea88e6ef05a7d69adcb6bee2d 77 SMART SM00914 34 70 6.8E-12 T 14-10-2018 IPR014957 IDEAL domain GYO_1343 a63c7cdea88e6ef05a7d69adcb6bee2d 77 Pfam PF08858 IDEAL domain 34 70 4.5E-14 T 14-10-2018 IPR014957 IDEAL domain GYO_1343 a63c7cdea88e6ef05a7d69adcb6bee2d 77 Gene3D G3DSA:4.10.810.10 20 77 1.1E-10 T 14-10-2018 IPR027393 Virus scaffolding protein, C-terminal GO:0005515 GYO_3276 a8e88e62a214430da1061f17f8f0b822 425 Gene3D G3DSA:3.40.190.10 139 395 2.6E-142 T 14-10-2018 GYO_3276 a8e88e62a214430da1061f17f8f0b822 425 Gene3D G3DSA:3.40.190.10 46 354 2.6E-142 T 14-10-2018 GYO_3276 a8e88e62a214430da1061f17f8f0b822 425 SUPERFAMILY SSF53850 18 414 1.49E-65 T 14-10-2018 GYO_3276 a8e88e62a214430da1061f17f8f0b822 425 Pfam PF01547 Bacterial extracellular solute-binding protein 42 334 1.9E-38 T 14-10-2018 IPR006059 Bacterial extracellular solute-binding protein GYO_2352 848bd47ee4dbc2d0a07d7db593f8b9f5 153 Gene3D G3DSA:2.60.40.790 61 143 4.8E-7 T 14-10-2018 IPR008978 HSP20-like chaperone GYO_2352 848bd47ee4dbc2d0a07d7db593f8b9f5 153 SUPERFAMILY SSF49764 64 151 8.2E-10 T 14-10-2018 IPR008978 HSP20-like chaperone GYO_3961 1d160d82f0b3e750f1f64928bc784217 295 Gene3D G3DSA:3.40.190.10 91 286 2.4E-64 T 14-10-2018 GYO_3961 1d160d82f0b3e750f1f64928bc784217 295 Pfam PF03466 LysR substrate binding domain 87 289 1.5E-43 T 14-10-2018 IPR005119 LysR, substrate-binding GYO_3961 1d160d82f0b3e750f1f64928bc784217 295 SUPERFAMILY SSF46785 1 84 1.45E-24 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily GYO_3961 1d160d82f0b3e750f1f64928bc784217 295 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 62 1.5E-22 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 GYO_3961 1d160d82f0b3e750f1f64928bc784217 295 Gene3D G3DSA:3.40.190.10 162 267 2.4E-64 T 14-10-2018 GYO_3961 1d160d82f0b3e750f1f64928bc784217 295 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 7.1E-10 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 GYO_3961 1d160d82f0b3e750f1f64928bc784217 295 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 7.1E-10 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 GYO_3961 1d160d82f0b3e750f1f64928bc784217 295 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 7.1E-10 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 GYO_3961 1d160d82f0b3e750f1f64928bc784217 295 SUPERFAMILY SSF53850 88 289 9.96E-39 T 14-10-2018 GYO_3961 1d160d82f0b3e750f1f64928bc784217 295 Gene3D G3DSA:1.10.10.10 1 90 7.3E-32 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily GYO_0386 9b283cc2942ed6f97df379cf9ce0a6c3 276 Gene3D G3DSA:1.10.1660.10 2 124 3.6E-27 T 14-10-2018 GYO_0386 9b283cc2942ed6f97df379cf9ce0a6c3 276 SUPERFAMILY SSF55136 126 274 6.8E-15 T 14-10-2018 IPR011256 Regulatory factor, effector binding domain superfamily GYO_0386 9b283cc2942ed6f97df379cf9ce0a6c3 276 SMART SM00422 2 72 1.9E-17 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 GYO_0386 9b283cc2942ed6f97df379cf9ce0a6c3 276 Pfam PF13411 MerR HTH family regulatory protein 3 70 1.8E-17 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 GYO_0386 9b283cc2942ed6f97df379cf9ce0a6c3 276 Gene3D G3DSA:3.20.80.10 125 274 9.9E-28 T 14-10-2018 IPR011256 Regulatory factor, effector binding domain superfamily GYO_0386 9b283cc2942ed6f97df379cf9ce0a6c3 276 SMART SM00871 125 272 2.2E-10 T 14-10-2018 IPR010499 Bacterial transcription activator, effector binding GYO_0386 9b283cc2942ed6f97df379cf9ce0a6c3 276 Pfam PF06445 GyrI-like small molecule binding domain 126 272 8.5E-12 T 14-10-2018 IPR029442 GyrI-like small molecule binding domain GYO_0386 9b283cc2942ed6f97df379cf9ce0a6c3 276 SUPERFAMILY SSF46955 2 107 1.61E-26 T 14-10-2018 IPR009061 Putative DNA-binding domain superfamily GYO_4024 e994a68bc430b179e38ef832f6ffced5 482 Gene3D G3DSA:3.30.870.10 298 481 9.5E-32 T 14-10-2018 GYO_4024 e994a68bc430b179e38ef832f6ffced5 482 Hamap MF_01916 Cardiolipin synthase. 8 482 47.288 T 14-10-2018 IPR030874 Cardiolipin synthase, Firmicutes-type GO:0008808|GO:0032049 GYO_4024 e994a68bc430b179e38ef832f6ffced5 482 SUPERFAMILY SSF56024 269 469 1.75E-54 T 14-10-2018 GYO_4024 e994a68bc430b179e38ef832f6ffced5 482 Pfam PF13396 Phospholipase_D-nuclease N-terminal 13 55 9.3E-13 T 14-10-2018 IPR027379 Cardiolipin synthase N-terminal GYO_4024 e994a68bc430b179e38ef832f6ffced5 482 SMART SM00155 217 244 1.7E-5 T 14-10-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 GYO_4024 e994a68bc430b179e38ef832f6ffced5 482 SMART SM00155 395 422 1.0E-6 T 14-10-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 GYO_4024 e994a68bc430b179e38ef832f6ffced5 482 TIGRFAM TIGR04265 bac_cardiolipin: cardiolipin synthase 4 482 4.6E-199 T 14-10-2018 IPR022924 Cardiolipin synthase GO:0008808|GO:0016780|GO:0032049 GYO_4024 e994a68bc430b179e38ef832f6ffced5 482 PIRSF PIRSF000850 307 395 0.23 T 14-10-2018 GYO_4024 e994a68bc430b179e38ef832f6ffced5 482 PIRSF PIRSF000850 389 463 0.19 T 14-10-2018 GYO_4024 e994a68bc430b179e38ef832f6ffced5 482 PIRSF PIRSF000850 107 280 0.14 T 14-10-2018 GYO_4024 e994a68bc430b179e38ef832f6ffced5 482 SUPERFAMILY SSF56024 79 312 8.75E-58 T 14-10-2018 GYO_4024 e994a68bc430b179e38ef832f6ffced5 482 Gene3D G3DSA:3.30.870.10 108 294 2.5E-48 T 14-10-2018 GYO_4024 e994a68bc430b179e38ef832f6ffced5 482 Pfam PF13091 PLD-like domain 323 449 2.3E-28 T 14-10-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 GYO_4024 e994a68bc430b179e38ef832f6ffced5 482 Pfam PF13091 PLD-like domain 135 277 9.8E-15 T 14-10-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 GYO_3136 3b1f2dac996dd245ca2472725b8183ee 119 Pfam PF00453 Ribosomal protein L20 3 109 5.7E-50 T 14-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 GYO_3136 3b1f2dac996dd245ca2472725b8183ee 119 TIGRFAM TIGR01032 rplT_bact: ribosomal protein bL20 1 114 4.7E-51 T 14-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 GYO_3136 3b1f2dac996dd245ca2472725b8183ee 119 ProSitePatterns PS00937 Ribosomal protein L20 signature. 54 70 - T 14-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 GYO_3136 3b1f2dac996dd245ca2472725b8183ee 119 Hamap MF_00382 50S ribosomal protein L20 [rplT]. 2 115 30.133 T 14-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 GYO_3136 3b1f2dac996dd245ca2472725b8183ee 119 SUPERFAMILY SSF74731 2 116 1.57E-50 T 14-10-2018 IPR035566 Ribosomal protein L20, C-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 GYO_3136 3b1f2dac996dd245ca2472725b8183ee 119 ProDom PD002389 RIBOSOMAL RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN L20 50S L20 CHLOROPLAST BACTERIAL ORGANELLE 23 70 3.0E-13 T 14-10-2018 GYO_3136 3b1f2dac996dd245ca2472725b8183ee 119 PRINTS PR00062 Ribosomal protein L20 signature 42 71 3.8E-41 T 14-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 GYO_3136 3b1f2dac996dd245ca2472725b8183ee 119 PRINTS PR00062 Ribosomal protein L20 signature 75 101 3.8E-41 T 14-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 GYO_3136 3b1f2dac996dd245ca2472725b8183ee 119 PRINTS PR00062 Ribosomal protein L20 signature 12 41 3.8E-41 T 14-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 GYO_3136 3b1f2dac996dd245ca2472725b8183ee 119 Gene3D G3DSA:1.10.720.90 2 55 1.5E-26 T 14-10-2018 GYO_3136 3b1f2dac996dd245ca2472725b8183ee 119 Gene3D G3DSA:1.10.1900.20 56 119 3.5E-29 T 14-10-2018 IPR035566 Ribosomal protein L20, C-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 GYO_0856 5ec9b8f6935b18c1b1fce6a5976977b4 151 TIGRFAM TIGR01575 rimI: ribosomal-protein-alanine acetyltransferase 14 145 1.3E-45 T 14-10-2018 IPR006464 N-acetyltransferase RimI/Ard1 GO:0006474|GO:0016407 GYO_0856 5ec9b8f6935b18c1b1fce6a5976977b4 151 Gene3D G3DSA:3.40.630.30 5 151 8.3E-44 T 14-10-2018 GYO_0856 5ec9b8f6935b18c1b1fce6a5976977b4 151 SUPERFAMILY SSF55729 7 149 1.27E-34 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase GYO_0856 5ec9b8f6935b18c1b1fce6a5976977b4 151 Pfam PF00583 Acetyltransferase (GNAT) family 16 125 2.8E-21 T 14-10-2018 IPR000182 GNAT domain GYO_1210 bb4df746e7ad0727042774f94ec9b5b7 140 Gene3D G3DSA:3.10.580.10 1 140 2.9E-39 T 14-10-2018 GYO_1210 bb4df746e7ad0727042774f94ec9b5b7 140 SUPERFAMILY SSF54631 3 117 5.18E-36 T 14-10-2018 GYO_1210 bb4df746e7ad0727042774f94ec9b5b7 140 SMART SM00116 11 58 1.3E-12 T 14-10-2018 IPR000644 CBS domain GYO_1210 bb4df746e7ad0727042774f94ec9b5b7 140 SMART SM00116 75 122 8.4E-14 T 14-10-2018 IPR000644 CBS domain GYO_1210 bb4df746e7ad0727042774f94ec9b5b7 140 Pfam PF00571 CBS domain 8 54 1.3E-12 T 14-10-2018 IPR000644 CBS domain GYO_1210 bb4df746e7ad0727042774f94ec9b5b7 140 Pfam PF00571 CBS domain 68 118 3.6E-12 T 14-10-2018 IPR000644 CBS domain GYO_0174 202ff305f321b7d6222044de9da5b245 247 SUPERFAMILY SSF55120 1 247 1.73E-89 T 14-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 GYO_0174 202ff305f321b7d6222044de9da5b245 247 Pfam PF01416 tRNA pseudouridine synthase 144 246 1.2E-35 T 14-10-2018 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 GYO_0174 202ff305f321b7d6222044de9da5b245 247 Pfam PF01416 tRNA pseudouridine synthase 8 104 1.0E-8 T 14-10-2018 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 GYO_0174 202ff305f321b7d6222044de9da5b245 247 Gene3D G3DSA:3.30.70.660 107 244 1.4E-51 T 14-10-2018 IPR020095 Pseudouridine synthase I, TruA, C-terminal GO:0003723|GO:0009982 GYO_0174 202ff305f321b7d6222044de9da5b245 247 Gene3D G3DSA:3.30.70.580 1 106 2.3E-34 T 14-10-2018 GYO_0174 202ff305f321b7d6222044de9da5b245 247 Hamap MF_00171 tRNA pseudouridine synthase A [truA]. 1 245 37.105 T 14-10-2018 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 GYO_0174 202ff305f321b7d6222044de9da5b245 247 PIRSF PIRSF001430 1 247 1.2E-86 T 14-10-2018 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 GYO_0174 202ff305f321b7d6222044de9da5b245 247 TIGRFAM TIGR00071 hisT_truA: tRNA pseudouridine(38-40) synthase 3 240 4.1E-78 T 14-10-2018 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 GYO_0348 43d485072afefb25bcaafbf5d67ccade 348 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 26 133 1.3E-29 T 14-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 GYO_0348 43d485072afefb25bcaafbf5d67ccade 348 Pfam PF00107 Zinc-binding dehydrogenase 173 291 1.3E-8 T 14-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 GYO_0348 43d485072afefb25bcaafbf5d67ccade 348 Gene3D G3DSA:3.90.180.10 11 320 1.1E-74 T 14-10-2018 GYO_0348 43d485072afefb25bcaafbf5d67ccade 348 SUPERFAMILY SSF50129 1 172 4.57E-48 T 14-10-2018 IPR011032 GroES-like superfamily GYO_0348 43d485072afefb25bcaafbf5d67ccade 348 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 58 72 - T 14-10-2018 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 GYO_0348 43d485072afefb25bcaafbf5d67ccade 348 SUPERFAMILY SSF51735 140 284 2.68E-20 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily GYO_0348 43d485072afefb25bcaafbf5d67ccade 348 Gene3D G3DSA:3.40.50.720 150 282 1.1E-74 T 14-10-2018 GYO_0348 43d485072afefb25bcaafbf5d67ccade 348 SMART SM00829 7 327 5.8E-4 T 14-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 GYO_1792 68f42128fce30d56a8b86f08e374f22d 257 Gene3D G3DSA:3.40.50.1000 4 247 8.7E-84 T 14-10-2018 IPR023214 HAD superfamily GYO_1792 68f42128fce30d56a8b86f08e374f22d 257 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 5 223 2.0E-24 T 14-10-2018 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: R-HSA-446205 GYO_1792 68f42128fce30d56a8b86f08e374f22d 257 Pfam PF08282 haloacid dehalogenase-like hydrolase 6 249 2.5E-60 T 14-10-2018 GYO_1792 68f42128fce30d56a8b86f08e374f22d 257 ProSitePatterns PS01229 Hypothetical cof family signature 2. 204 226 - T 14-10-2018 GYO_1792 68f42128fce30d56a8b86f08e374f22d 257 Gene3D G3DSA:3.30.1240.10 81 179 8.7E-84 T 14-10-2018 GYO_1792 68f42128fce30d56a8b86f08e374f22d 257 SUPERFAMILY SSF56784 1 254 1.1E-69 T 14-10-2018 IPR036412 HAD-like superfamily GYO_1792 68f42128fce30d56a8b86f08e374f22d 257 TIGRFAM TIGR00099 Cof-subfamily: Cof-like hydrolase 5 249 1.4E-63 T 14-10-2018 IPR000150 Cof family GO:0016787 GYO_3482 0aa7c3bb100ae6fb6e9a4d3e845cc5a3 407 Gene3D G3DSA:3.30.450.40 6 154 4.2E-5 T 14-10-2018 IPR029016 GAF-like domain superfamily GYO_3482 0aa7c3bb100ae6fb6e9a4d3e845cc5a3 407 Gene3D G3DSA:1.10.10.2840 274 406 6.5E-18 T 14-10-2018 GYO_3482 0aa7c3bb100ae6fb6e9a4d3e845cc5a3 407 Pfam PF06018 CodY GAF-like domain 14 155 1.9E-8 T 14-10-2018 IPR010312 GTP-sensing transcriptional pleiotropic repressor CodY, N-terminal GO:0003677|GO:0005525 GYO_3482 0aa7c3bb100ae6fb6e9a4d3e845cc5a3 407 Pfam PF13556 PucR C-terminal helix-turn-helix domain 345 401 6.0E-16 T 14-10-2018 IPR025736 PucR C-terminal helix-turn-helix domain GYO_0496 7312b8c2dc3297b95bac9e3fd62e34cc 257 Pfam PF03741 Integral membrane protein TerC family 35 212 1.6E-51 T 14-10-2018 IPR005496 Integral membrane protein TerC GO:0016021 GYO_0496 7312b8c2dc3297b95bac9e3fd62e34cc 257 SUPERFAMILY SSF103473 30 238 5.23E-5 T 14-10-2018 IPR036259 MFS transporter superfamily GYO_0496 7312b8c2dc3297b95bac9e3fd62e34cc 257 TIGRFAM TIGR03716 R_switched_YkoY: integral membrane protein, YkoY family 32 241 1.2E-80 T 14-10-2018 IPR022493 Integral membrane YkoY GYO_4454 57815bf638bc0687d86e92ea84593154 235 Gene3D G3DSA:1.10.10.10 129 235 5.2E-43 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily GYO_4454 57815bf638bc0687d86e92ea84593154 235 SUPERFAMILY SSF46894 129 230 5.95E-32 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 GYO_4454 57815bf638bc0687d86e92ea84593154 235 Pfam PF00486 Transcriptional regulatory protein, C terminal 154 229 6.4E-28 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 GYO_4454 57815bf638bc0687d86e92ea84593154 235 SMART SM00862 153 229 1.7E-28 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 GYO_4454 57815bf638bc0687d86e92ea84593154 235 SMART SM00448 3 113 1.1E-48 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 GYO_4454 57815bf638bc0687d86e92ea84593154 235 Pfam PF00072 Response regulator receiver domain 5 114 8.8E-31 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 GYO_4454 57815bf638bc0687d86e92ea84593154 235 Gene3D G3DSA:3.40.50.2300 1 128 8.4E-41 T 14-10-2018 GYO_4454 57815bf638bc0687d86e92ea84593154 235 SUPERFAMILY SSF52172 2 125 2.13E-44 T 14-10-2018 IPR011006 CheY-like superfamily GYO_4003 005be4703411b2c60faae4d90b4db116 345 Pfam PF13424 Tetratricopeptide repeat 166 232 3.4E-8 T 14-10-2018 GYO_4003 005be4703411b2c60faae4d90b4db116 345 SUPERFAMILY SSF48452 73 275 9.29E-19 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 GYO_4003 005be4703411b2c60faae4d90b4db116 345 SMART SM00028 121 154 74.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 GYO_4003 005be4703411b2c60faae4d90b4db116 345 SMART SM00028 202 235 13.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 GYO_4003 005be4703411b2c60faae4d90b4db116 345 SMART SM00028 162 195 51.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 GYO_4003 005be4703411b2c60faae4d90b4db116 345 Gene3D G3DSA:1.25.40.10 1 344 1.8E-74 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 GYO_2111 96c0e7e7be411380c79191210bb64824 463 Gene3D G3DSA:1.20.1250.20 17 217 4.2E-17 T 14-10-2018 GYO_2111 96c0e7e7be411380c79191210bb64824 463 SUPERFAMILY SSF103473 17 423 1.7E-39 T 14-10-2018 IPR036259 MFS transporter superfamily GYO_2111 96c0e7e7be411380c79191210bb64824 463 ProSitePatterns PS00872 Sodium:galactoside symporter family signature. 65 90 - T 14-10-2018 IPR018043 Sodium:galactoside symporter, conserved site GO:0005215|GO:0006814|GO:0016020 GYO_2111 96c0e7e7be411380c79191210bb64824 463 Gene3D G3DSA:1.20.1250.20 238 439 5.2E-11 T 14-10-2018 GYO_2111 96c0e7e7be411380c79191210bb64824 463 Pfam PF13347 MFS/sugar transport protein 16 437 6.0E-105 T 14-10-2018 GYO_2111 96c0e7e7be411380c79191210bb64824 463 TIGRFAM TIGR00792 gph: sugar (Glycoside-Pentoside-Hexuronide) transporter 14 450 9.9E-156 T 14-10-2018 IPR001927 Sodium:galactoside symporter GO:0005215|GO:0006814|GO:0016020 GYO_2941 79dc37625c11ab4dfda93c273dc147ab 146 Gene3D G3DSA:3.40.50.510 1 145 2.7E-36 T 14-10-2018 IPR036662 Phosphotransferase system, mannose-type IIA component superfamily GO:0009401|GO:0016021 GYO_2941 79dc37625c11ab4dfda93c273dc147ab 146 TIGRFAM TIGR00824 EIIA-man: PTS system, mannose/fructose/sorbose family, IIA component 1 116 1.3E-53 T 14-10-2018 IPR013789 Phosphotransferase system, mannose family IIA component GO:0005737|GO:0008643|GO:0016773 GYO_2941 79dc37625c11ab4dfda93c273dc147ab 146 SUPERFAMILY SSF53062 1 127 2.49E-32 T 14-10-2018 IPR036662 Phosphotransferase system, mannose-type IIA component superfamily GO:0009401|GO:0016021 GYO_2941 79dc37625c11ab4dfda93c273dc147ab 146 Pfam PF03610 PTS system fructose IIA component 4 116 5.7E-30 T 14-10-2018 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 GYO_2695 61a64beb3f80509000364bfa29a08be2 160 Pfam PF00364 Biotin-requiring enzyme 84 155 8.7E-22 T 14-10-2018 IPR000089 Biotin/lipoyl attachment GYO_2695 61a64beb3f80509000364bfa29a08be2 160 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 87 100 7.7E-15 T 14-10-2018 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 GYO_2695 61a64beb3f80509000364bfa29a08be2 160 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 119 132 7.7E-15 T 14-10-2018 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 GYO_2695 61a64beb3f80509000364bfa29a08be2 160 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 104 118 7.7E-15 T 14-10-2018 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 GYO_2695 61a64beb3f80509000364bfa29a08be2 160 ProSitePatterns PS00188 Biotin-requiring enzymes attachment site. 114 131 - T 14-10-2018 IPR001882 Biotin-binding site Reactome: R-HSA-196780|Reactome: R-HSA-3371599 GYO_2695 61a64beb3f80509000364bfa29a08be2 160 SUPERFAMILY SSF51230 81 157 3.01E-22 T 14-10-2018 IPR011053 Single hybrid motif GYO_2695 61a64beb3f80509000364bfa29a08be2 160 TIGRFAM TIGR00531 BCCP: acetyl-CoA carboxylase, biotin carboxyl carrier protein 2 158 9.5E-69 T 14-10-2018 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 GYO_2695 61a64beb3f80509000364bfa29a08be2 160 Gene3D G3DSA:2.40.50.100 80 157 5.1E-27 T 14-10-2018 GYO_2634 2483a1878055333c01e49cb1344c3f4d 275 TIGRFAM TIGR03592 yidC_oxa1_cterm: membrane protein insertase, YidC/Oxa1 family 63 258 4.5E-51 T 14-10-2018 IPR028055 Membrane insertase YidC/Oxa1, C-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 GYO_2634 2483a1878055333c01e49cb1344c3f4d 275 Pfam PF02096 60Kd inner membrane protein 63 258 2.5E-47 T 14-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 GYO_2634 2483a1878055333c01e49cb1344c3f4d 275 Hamap MF_01811 Membrane protein insertase YidC [yidC]. 3 262 28.064 T 14-10-2018 IPR023060 Membrane insertase YidC/YidC1/YidC2, Firmicutes GO:0016021|GO:0032977 GYO_3387 dcfd73cc03cfd8d54484771da2ca23de 222 Gene3D G3DSA:3.30.70.1450 142 222 2.0E-27 T 14-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 GYO_3387 dcfd73cc03cfd8d54484771da2ca23de 222 Pfam PF02080 TrkA-C domain 154 219 1.4E-11 T 14-10-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 GYO_3387 dcfd73cc03cfd8d54484771da2ca23de 222 Pfam PF02254 TrkA-N domain 9 124 1.4E-27 T 14-10-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 GYO_3387 dcfd73cc03cfd8d54484771da2ca23de 222 Gene3D G3DSA:3.40.50.720 1 141 7.6E-39 T 14-10-2018 GYO_3387 dcfd73cc03cfd8d54484771da2ca23de 222 SUPERFAMILY SSF116726 136 219 5.1E-18 T 14-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 GYO_3387 dcfd73cc03cfd8d54484771da2ca23de 222 SUPERFAMILY SSF51735 7 136 2.49E-37 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily GYO_2532 30e27102280d4e5b280e6c3e6cb52a08 250 SMART SM00257 200 246 4.0E-9 T 14-10-2018 IPR018392 LysM domain GYO_2532 30e27102280d4e5b280e6c3e6cb52a08 250 Gene3D G3DSA:3.10.350.10 186 250 7.9E-11 T 14-10-2018 IPR036779 LysM domain superfamily GYO_2532 30e27102280d4e5b280e6c3e6cb52a08 250 SUPERFAMILY SSF54106 199 246 1.7E-6 T 14-10-2018 GYO_2532 30e27102280d4e5b280e6c3e6cb52a08 250 Pfam PF01476 LysM domain 201 246 2.3E-8 T 14-10-2018 IPR018392 LysM domain GYO_3519 b141c0db369182da1880ed54a4f02be8 433 Pfam PF03447 Homoserine dehydrogenase, NAD binding domain 10 129 5.5E-29 T 14-10-2018 IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding GO:0016491|GO:0050661|GO:0055114 GYO_3519 b141c0db369182da1880ed54a4f02be8 433 ProSitePatterns PS01042 Homoserine dehydrogenase signature. 183 205 - T 14-10-2018 IPR019811 Homoserine dehydrogenase, conserved site GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3 GYO_3519 b141c0db369182da1880ed54a4f02be8 433 Gene3D G3DSA:3.30.360.10 136 343 2.4E-152 T 14-10-2018 GYO_3519 b141c0db369182da1880ed54a4f02be8 433 SUPERFAMILY SSF55021 349 422 1.8E-11 T 14-10-2018 GYO_3519 b141c0db369182da1880ed54a4f02be8 433 Pfam PF01842 ACT domain 351 416 6.2E-13 T 14-10-2018 IPR002912 ACT domain GYO_3519 b141c0db369182da1880ed54a4f02be8 433 SUPERFAMILY SSF51735 2 158 1.6E-36 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily GYO_3519 b141c0db369182da1880ed54a4f02be8 433 Gene3D G3DSA:3.30.70.260 344 418 2.4E-152 T 14-10-2018 GYO_3519 b141c0db369182da1880ed54a4f02be8 433 Gene3D G3DSA:3.40.50.720 4 336 2.4E-152 T 14-10-2018 GYO_3519 b141c0db369182da1880ed54a4f02be8 433 PIRSF PIRSF000098 1 430 2.7E-178 T 14-10-2018 IPR016204 Homoserine dehydrogenase GO:0004412|GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3 GYO_3519 b141c0db369182da1880ed54a4f02be8 433 Pfam PF00742 Homoserine dehydrogenase 137 315 5.6E-66 T 14-10-2018 IPR001342 Homoserine dehydrogenase, catalytic GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3 GYO_3519 b141c0db369182da1880ed54a4f02be8 433 SUPERFAMILY SSF55347 137 302 2.75E-53 T 14-10-2018 GYO_2524 35b1f9b09e881a68b1b689a559a1f521 303 Gene3D G3DSA:1.10.101.10 26 107 1.4E-21 T 14-10-2018 IPR036366 PGBD superfamily Reactome: R-HSA-1442490|Reactome: R-HSA-1474228 GYO_2524 35b1f9b09e881a68b1b689a559a1f521 303 Pfam PF01471 Putative peptidoglycan binding domain 40 97 3.0E-16 T 14-10-2018 IPR002477 Peptidoglycan binding-like GYO_2524 35b1f9b09e881a68b1b689a559a1f521 303 Gene3D G3DSA:2.40.10.420 268 303 8.0E-21 T 14-10-2018 GYO_2524 35b1f9b09e881a68b1b689a559a1f521 303 Pfam PF07486 Cell Wall Hydrolase 204 302 8.2E-26 T 14-10-2018 IPR011105 Cell wall hydrolase, SleB GO:0016787 GYO_2524 35b1f9b09e881a68b1b689a559a1f521 303 Gene3D G3DSA:1.10.10.2520 188 267 1.3E-30 T 14-10-2018 GYO_2524 35b1f9b09e881a68b1b689a559a1f521 303 TIGRFAM TIGR02869 spore_SleB: spore cortex-lytic enzyme 29 302 1.9E-93 T 14-10-2018 IPR014224 Spore cortex-lytic enzyme SleB GO:0003824|GO:0009847 GYO_2524 35b1f9b09e881a68b1b689a559a1f521 303 SUPERFAMILY SSF47090 31 97 7.06E-19 T 14-10-2018 IPR036365 PGBD-like superfamily GYO_1885 c8cff17b6e0564965bc62a19fd010c60 263 Pfam PF02578 Multi-copper polyphenol oxidoreductase laccase 20 258 3.3E-74 T 14-10-2018 IPR003730 Multi-copper polyphenol oxidoreductase GYO_1885 c8cff17b6e0564965bc62a19fd010c60 263 TIGRFAM TIGR00726 TIGR00726: YfiH family protein 25 261 3.9E-82 T 14-10-2018 IPR003730 Multi-copper polyphenol oxidoreductase GYO_1885 c8cff17b6e0564965bc62a19fd010c60 263 Gene3D G3DSA:3.60.140.10 2 263 6.7E-95 T 14-10-2018 IPR038371 Multi-copper polyphenol oxidoreductase superfamily GYO_1885 c8cff17b6e0564965bc62a19fd010c60 263 SUPERFAMILY SSF64438 13 261 7.94E-83 T 14-10-2018 IPR011324 Cytotoxic necrotizing factor-like, catalytic GYO_1243 373634c700c123d4851756e4aa6f4134 199 Pfam PF01553 Acyltransferase 19 142 2.5E-24 T 14-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 GYO_1243 373634c700c123d4851756e4aa6f4134 199 TIGRFAM TIGR00530 AGP_acyltrn: 1-acylglycerol-3-phosphate O-acyltransferases 19 141 1.2E-38 T 14-10-2018 IPR004552 1-acyl-sn-glycerol-3-phosphate acyltransferase GO:0003841|GO:0008654|GO:0016020 KEGG: 00561+2.3.1.51|KEGG: 00564+2.3.1.51|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7417|MetaCyc: PWY-7587|MetaCyc: PWY-7589|MetaCyc: PWY-7782|Reactome: R-HSA-1483166 GYO_1243 373634c700c123d4851756e4aa6f4134 199 SMART SM00563 33 144 2.6E-29 T 14-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 GYO_1243 373634c700c123d4851756e4aa6f4134 199 SUPERFAMILY SSF69593 17 193 2.22E-36 T 14-10-2018 GYO_1903 8d2d35f775c8def14a3b05a464b80466 311 TIGRFAM TIGR01037 pyrD_sub1_fam: dihydroorotate dehydrogenase family protein 2 300 1.1E-138 T 14-10-2018 IPR005720 Dihydroorotate dehydrogenase domain GO:0005737|GO:0016627|GO:0055114 GYO_1903 8d2d35f775c8def14a3b05a464b80466 311 SUPERFAMILY SSF51395 2 299 2.2E-89 T 14-10-2018 GYO_1903 8d2d35f775c8def14a3b05a464b80466 311 PIRSF PIRSF000164 1 301 6.2E-88 T 14-10-2018 IPR012135 Dihydroorotate dehydrogenase, class 1/ 2 GO:0004152|GO:0006222|GO:0055114 GYO_1903 8d2d35f775c8def14a3b05a464b80466 311 ProSitePatterns PS00911 Dihydroorotate dehydrogenase signature 1. 38 57 - T 14-10-2018 IPR001295 Dihydroorotate dehydrogenase, conserved site GO:0004152|GO:0006207|GO:0055114 Reactome: R-HSA-500753 GYO_1903 8d2d35f775c8def14a3b05a464b80466 311 ProSitePatterns PS00912 Dihydroorotate dehydrogenase signature 2. 237 257 - T 14-10-2018 IPR001295 Dihydroorotate dehydrogenase, conserved site GO:0004152|GO:0006207|GO:0055114 Reactome: R-HSA-500753 GYO_1903 8d2d35f775c8def14a3b05a464b80466 311 Pfam PF01180 Dihydroorotate dehydrogenase 1 284 1.0E-97 T 14-10-2018 IPR005720 Dihydroorotate dehydrogenase domain GO:0005737|GO:0016627|GO:0055114 GYO_1903 8d2d35f775c8def14a3b05a464b80466 311 Hamap MF_00224 Dihydroorotate dehydrogenase [pyrD]. 2 299 42.278 T 14-10-2018 IPR024920 Dihydroorotate dehydrogenase, class 1 GO:0004152|GO:0005737|GO:0006221 GYO_1903 8d2d35f775c8def14a3b05a464b80466 311 Gene3D G3DSA:3.20.20.70 1 302 2.6E-101 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 GYO_1818 8f01a3e955c8139fe142347e8f436dff 62 Pfam PF17259 Family of unknown function (DUF5325) 1 61 2.2E-27 T 14-10-2018 IPR035211 Protein of unknown function DUF5325 GYO_1818 8f01a3e955c8139fe142347e8f436dff 62 ProDom PD699877 YLAF TRANSMEMBRANE MEMBRANE BH2633 1 56 1.0E-16 T 14-10-2018 IPR035211 Protein of unknown function DUF5325 GYO_1631 abdb87f250d930457bfc6a2a43a6bf86 365 PRINTS PR00474 Glutamate 5-kinase family signature 41 55 5.0E-53 T 14-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 GYO_1631 abdb87f250d930457bfc6a2a43a6bf86 365 PRINTS PR00474 Glutamate 5-kinase family signature 147 174 5.0E-53 T 14-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 GYO_1631 abdb87f250d930457bfc6a2a43a6bf86 365 PRINTS PR00474 Glutamate 5-kinase family signature 75 103 5.0E-53 T 14-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 GYO_1631 abdb87f250d930457bfc6a2a43a6bf86 365 PRINTS PR00474 Glutamate 5-kinase family signature 208 228 5.0E-53 T 14-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 GYO_1631 abdb87f250d930457bfc6a2a43a6bf86 365 PRINTS PR00474 Glutamate 5-kinase family signature 115 136 5.0E-53 T 14-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 GYO_1631 abdb87f250d930457bfc6a2a43a6bf86 365 PIRSF PIRSF000729 1 364 7.3E-134 T 14-10-2018 IPR011529 Glutamate 5-kinase GO:0004349|GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922 GYO_1631 abdb87f250d930457bfc6a2a43a6bf86 365 Pfam PF00696 Amino acid kinase family 4 232 4.4E-46 T 14-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 GYO_1631 abdb87f250d930457bfc6a2a43a6bf86 365 TIGRFAM TIGR01027 proB: glutamate 5-kinase 4 361 1.2E-145 T 14-10-2018 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 GYO_1631 abdb87f250d930457bfc6a2a43a6bf86 365 Gene3D G3DSA:3.40.1160.10 1 261 2.9E-82 T 14-10-2018 IPR036393 Acetylglutamate kinase-like superfamily GYO_1631 abdb87f250d930457bfc6a2a43a6bf86 365 SUPERFAMILY SSF53633 4 254 1.57E-67 T 14-10-2018 IPR036393 Acetylglutamate kinase-like superfamily GYO_1631 abdb87f250d930457bfc6a2a43a6bf86 365 Gene3D G3DSA:2.30.130.10 266 362 2.0E-23 T 14-10-2018 IPR036974 PUA domain superfamily GO:0003723 GYO_1631 abdb87f250d930457bfc6a2a43a6bf86 365 SMART SM00359 277 355 1.4E-19 T 14-10-2018 IPR002478 PUA domain GO:0003723 GYO_1631 abdb87f250d930457bfc6a2a43a6bf86 365 Pfam PF01472 PUA domain 277 347 9.3E-19 T 14-10-2018 IPR002478 PUA domain GO:0003723 GYO_1631 abdb87f250d930457bfc6a2a43a6bf86 365 Hamap MF_00456 Glutamate 5-kinase [proB]. 4 258 36.825 T 14-10-2018 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 GYO_1631 abdb87f250d930457bfc6a2a43a6bf86 365 ProSitePatterns PS00902 Glutamate 5-kinase signature. 206 223 - T 14-10-2018 IPR019797 Glutamate 5-kinase, conserved site GO:0004349|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 GYO_1631 abdb87f250d930457bfc6a2a43a6bf86 365 SUPERFAMILY SSF88697 277 361 6.08E-17 T 14-10-2018 IPR015947 PUA-like superfamily GYO_3832 6d1b4a5f926d2ebcc1bd83d3addf7763 194 Pfam PF03211 Pectate lyase 27 183 3.0E-54 T 14-10-2018 IPR004898 Pectate lyase PlyH/PlyE-like GO:0005576|GO:0030570 KEGG: 00040+4.2.2.2 GYO_3832 6d1b4a5f926d2ebcc1bd83d3addf7763 194 Gene3D G3DSA:2.160.20.10 16 194 3.4E-63 T 14-10-2018 IPR012334 Pectin lyase fold GYO_3832 6d1b4a5f926d2ebcc1bd83d3addf7763 194 SUPERFAMILY SSF51126 30 184 2.36E-54 T 14-10-2018 IPR011050 Pectin lyase fold/virulence factor GYO_2117 86fc1658cf0738329c07a6f535f689a0 233 ProSitePatterns PS01284 Thermonuclease family signature 2. 138 148 - T 14-10-2018 IPR002071 Thermonuclease active site GO:0003676|GO:0004518 Reactome: R-HSA-6802952 GYO_2117 86fc1658cf0738329c07a6f535f689a0 233 SUPERFAMILY SSF50199 62 199 1.24E-35 T 14-10-2018 GYO_2117 86fc1658cf0738329c07a6f535f689a0 233 Pfam PF00565 Staphylococcal nuclease homologue 89 196 1.5E-33 T 14-10-2018 IPR016071 Staphylococcal nuclease (SNase-like), OB-fold Reactome: R-HSA-6802952 GYO_2117 86fc1658cf0738329c07a6f535f689a0 233 Gene3D G3DSA:2.40.50.90 56 201 7.9E-51 T 14-10-2018 IPR035437 SNase-like, OB-fold superfamily GYO_2117 86fc1658cf0738329c07a6f535f689a0 233 SMART SM00318 64 197 9.9E-47 T 14-10-2018 IPR016071 Staphylococcal nuclease (SNase-like), OB-fold Reactome: R-HSA-6802952 GYO_1890 5f28d68d72b6dc4ffafd9ce49321e566 164 Pfam PF05103 DivIVA protein 3 133 4.6E-49 T 14-10-2018 IPR007793 DivIVA family GYO_1890 5f28d68d72b6dc4ffafd9ce49321e566 164 TIGRFAM TIGR03544 DivI1A_domain: DivIVA domain 3 36 8.2E-17 T 14-10-2018 IPR019933 DivIVA domain GYO_2691 5a40bf2a496c317a0aaacafad366fa02 283 Gene3D G3DSA:3.40.50.10860 8 276 8.0E-119 T 14-10-2018 GYO_2691 5a40bf2a496c317a0aaacafad366fa02 283 Pfam PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain 5 120 3.4E-41 T 14-10-2018 IPR020630 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 GYO_2691 5a40bf2a496c317a0aaacafad366fa02 283 Hamap MF_01576 Bifunctional protein FolD [folD]. 3 282 40.571 T 14-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 GYO_2691 5a40bf2a496c317a0aaacafad366fa02 283 Pfam PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain 123 281 5.8E-75 T 14-10-2018 IPR020631 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain GO:0004488 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 GYO_2691 5a40bf2a496c317a0aaacafad366fa02 283 SUPERFAMILY SSF51735 122 280 1.17E-55 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily GYO_2691 5a40bf2a496c317a0aaacafad366fa02 283 ProSitePatterns PS00766 Tetrahydrofolate dehydrogenase/cyclohydrolase signature 1. 75 100 - T 14-10-2018 IPR020867 Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site GO:0003824|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 GYO_2691 5a40bf2a496c317a0aaacafad366fa02 283 Gene3D G3DSA:3.40.50.720 6 258 8.0E-119 T 14-10-2018 GYO_2691 5a40bf2a496c317a0aaacafad366fa02 283 SUPERFAMILY SSF53223 1 121 3.36E-41 T 14-10-2018 GYO_2691 5a40bf2a496c317a0aaacafad366fa02 283 ProSitePatterns PS00767 Tetrahydrofolate dehydrogenase/cyclohydrolase signature 2. 259 267 - T 14-10-2018 IPR020867 Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site GO:0003824|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 GYO_2691 5a40bf2a496c317a0aaacafad366fa02 283 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 255 273 1.0E-88 T 14-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 GYO_2691 5a40bf2a496c317a0aaacafad366fa02 283 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 238 254 1.0E-88 T 14-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 GYO_2691 5a40bf2a496c317a0aaacafad366fa02 283 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 154 174 1.0E-88 T 14-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 GYO_2691 5a40bf2a496c317a0aaacafad366fa02 283 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 109 130 1.0E-88 T 14-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 GYO_2691 5a40bf2a496c317a0aaacafad366fa02 283 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 33 55 1.0E-88 T 14-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 GYO_2691 5a40bf2a496c317a0aaacafad366fa02 283 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 74 101 1.0E-88 T 14-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 GYO_2691 5a40bf2a496c317a0aaacafad366fa02 283 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 203 232 1.0E-88 T 14-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 GYO_3666 68f1a484b4be3e5abca31226685e4e19 358 SUPERFAMILY SSF51735 12 210 4.23E-45 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily GYO_3666 68f1a484b4be3e5abca31226685e4e19 358 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 14 131 4.7E-25 T 14-10-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 GYO_3666 68f1a484b4be3e5abca31226685e4e19 358 Gene3D G3DSA:3.40.50.720 15 326 6.3E-143 T 14-10-2018 GYO_3666 68f1a484b4be3e5abca31226685e4e19 358 Pfam PF02894 Oxidoreductase family, C-terminal alpha/beta domain 143 250 3.1E-20 T 14-10-2018 IPR004104 Oxidoreductase, C-terminal GO:0016491|GO:0055114 GYO_3666 68f1a484b4be3e5abca31226685e4e19 358 Gene3D G3DSA:3.30.360.10 132 349 6.3E-143 T 14-10-2018 GYO_3837 dfd91997cdbace6232ea893d60b11fa7 310 Pfam PF02603 HPr Serine kinase N terminus 4 127 2.0E-39 T 14-10-2018 IPR011126 HPr(Ser) kinase/phosphorylase, N-terminal GO:0000155|GO:0000160|GO:0004672|GO:0005524|GO:0006109 GYO_3837 dfd91997cdbace6232ea893d60b11fa7 310 SUPERFAMILY SSF75138 4 131 2.22E-39 T 14-10-2018 IPR028979 HPr(Ser) kinase/phosphorylase-like, N-terminal domain superfamily GYO_3837 dfd91997cdbace6232ea893d60b11fa7 310 Hamap MF_01249 HPr kinase/phosphorylase [hprK]. 3 306 42.229 T 14-10-2018 IPR003755 HPr(Ser) kinase/phosphorylase GO:0000155|GO:0000160|GO:0005524|GO:0006109 GYO_3837 dfd91997cdbace6232ea893d60b11fa7 310 Gene3D G3DSA:3.40.50.300 132 310 1.8E-76 T 14-10-2018 GYO_3837 dfd91997cdbace6232ea893d60b11fa7 310 Pfam PF07475 HPr Serine kinase C-terminal domain 130 298 2.7E-77 T 14-10-2018 IPR011104 HPr kinase/phosphorylase, C-terminal GO:0000155|GO:0000160|GO:0004672|GO:0005524|GO:0006109 GYO_3837 dfd91997cdbace6232ea893d60b11fa7 310 Gene3D G3DSA:3.40.1390.20 1 131 1.2E-42 T 14-10-2018 IPR028979 HPr(Ser) kinase/phosphorylase-like, N-terminal domain superfamily GYO_3837 dfd91997cdbace6232ea893d60b11fa7 310 SUPERFAMILY SSF53795 132 298 3.97E-41 T 14-10-2018 GYO_3837 dfd91997cdbace6232ea893d60b11fa7 310 TIGRFAM TIGR00679 hpr-ser: HPr(Ser) kinase/phosphatase 7 301 2.5E-118 T 14-10-2018 IPR003755 HPr(Ser) kinase/phosphorylase GO:0000155|GO:0000160|GO:0005524|GO:0006109 GYO_4446 5207639d8f752a7d39e4f1547fe8b20b 227 SMART SM00448 7 117 1.5E-42 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 GYO_4446 5207639d8f752a7d39e4f1547fe8b20b 227 Pfam PF00072 Response regulator receiver domain 9 117 8.3E-29 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 GYO_4446 5207639d8f752a7d39e4f1547fe8b20b 227 Gene3D G3DSA:1.10.10.10 128 227 9.6E-29 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily GYO_4446 5207639d8f752a7d39e4f1547fe8b20b 227 Gene3D G3DSA:3.40.50.2300 1 125 4.0E-37 T 14-10-2018 GYO_4446 5207639d8f752a7d39e4f1547fe8b20b 227 SUPERFAMILY SSF52172 4 180 9.11E-41 T 14-10-2018 IPR011006 CheY-like superfamily GYO_4446 5207639d8f752a7d39e4f1547fe8b20b 227 Pfam PF00486 Transcriptional regulatory protein, C terminal 152 223 1.1E-24 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 GYO_4446 5207639d8f752a7d39e4f1547fe8b20b 227 SMART SM00862 150 224 2.8E-22 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 GYO_1449 0cc93c6dc00a18613bd87f36e1e1452d 305 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 28 73 6.2E-19 T 14-10-2018 IPR025966 Oligopeptide transport permease C-like, N-terminal domain GYO_1449 0cc93c6dc00a18613bd87f36e1e1452d 305 Gene3D G3DSA:1.10.3720.10 94 305 2.0E-22 T 14-10-2018 IPR035906 MetI-like superfamily GYO_1449 0cc93c6dc00a18613bd87f36e1e1452d 305 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 121 305 1.6E-31 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 GYO_1449 0cc93c6dc00a18613bd87f36e1e1452d 305 SUPERFAMILY SSF161098 99 286 1.7E-26 T 14-10-2018 IPR035906 MetI-like superfamily GYO_3606 b2a055ee09557a0533691248e1ed0cd3 451 SUPERFAMILY SSF47384 224 304 2.94E-14 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 GYO_3606 b2a055ee09557a0533691248e1ed0cd3 451 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 350 450 2.4E-14 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase GYO_3606 b2a055ee09557a0533691248e1ed0cd3 451 SMART SM00388 240 306 3.0E-12 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 GYO_3606 b2a055ee09557a0533691248e1ed0cd3 451 Gene3D G3DSA:1.10.287.130 236 305 5.5E-14 T 14-10-2018 GYO_3606 b2a055ee09557a0533691248e1ed0cd3 451 PRINTS PR00344 Bacterial sensor protein C-terminal signature 437 450 2.8E-6 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 GYO_3606 b2a055ee09557a0533691248e1ed0cd3 451 PRINTS PR00344 Bacterial sensor protein C-terminal signature 385 399 2.8E-6 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 GYO_3606 b2a055ee09557a0533691248e1ed0cd3 451 PRINTS PR00344 Bacterial sensor protein C-terminal signature 403 413 2.8E-6 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 GYO_3606 b2a055ee09557a0533691248e1ed0cd3 451 PRINTS PR00344 Bacterial sensor protein C-terminal signature 414 432 2.8E-6 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 GYO_3606 b2a055ee09557a0533691248e1ed0cd3 451 Gene3D G3DSA:3.30.565.10 309 451 8.4E-27 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily GYO_3606 b2a055ee09557a0533691248e1ed0cd3 451 SUPERFAMILY SSF55874 309 450 1.09E-25 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily GYO_3606 b2a055ee09557a0533691248e1ed0cd3 451 Pfam PF00672 HAMP domain 188 236 2.1E-8 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 GYO_3606 b2a055ee09557a0533691248e1ed0cd3 451 Pfam PF00512 His Kinase A (phospho-acceptor) domain 242 304 5.3E-11 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 GYO_3606 b2a055ee09557a0533691248e1ed0cd3 451 SMART SM00304 187 239 2.6E-10 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 GYO_3606 b2a055ee09557a0533691248e1ed0cd3 451 SMART SM00387 350 451 2.0E-20 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase GYO_3606 b2a055ee09557a0533691248e1ed0cd3 451 SUPERFAMILY SSF158472 188 236 4.71E-8 T 14-10-2018 GYO_3606 b2a055ee09557a0533691248e1ed0cd3 451 Gene3D G3DSA:1.10.8.500 186 235 3.9E-7 T 14-10-2018 GYO_3070 faaf0e7041a1a7177b657ce76007812f 199 SUPERFAMILY SSF52016 1 196 6.28E-59 T 14-10-2018 GYO_3070 faaf0e7041a1a7177b657ce76007812f 199 Pfam PF00694 Aconitase C-terminal domain 1 122 6.0E-35 T 14-10-2018 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain KEGG: 00290+4.2.1.33 GYO_3070 faaf0e7041a1a7177b657ce76007812f 199 TIGRFAM TIGR00171 leuD: 3-isopropylmalate dehydratase, small subunit 1 186 2.5E-101 T 14-10-2018 IPR004431 3-isopropylmalate dehydratase, small subunit GO:0003861|GO:0009098|GO:0009316 KEGG: 00290+4.2.1.33 GYO_3070 faaf0e7041a1a7177b657ce76007812f 199 Gene3D G3DSA:3.20.19.10 1 174 8.6E-74 T 14-10-2018 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel KEGG: 00290+4.2.1.33 GYO_3070 faaf0e7041a1a7177b657ce76007812f 199 Hamap MF_01031 3-isopropylmalate dehydratase small subunit [leuD]. 1 197 42.645 T 14-10-2018 IPR004431 3-isopropylmalate dehydratase, small subunit GO:0003861|GO:0009098|GO:0009316 KEGG: 00290+4.2.1.33 GYO_2098 a1d8b660f15e144c84a8b7860f358c32 329 SUPERFAMILY SSF47240 4 322 4.38E-93 T 14-10-2018 IPR009078 Ferritin-like superfamily GYO_2098 a1d8b660f15e144c84a8b7860f358c32 329 Gene3D G3DSA:1.10.620.20 3 293 1.1E-116 T 14-10-2018 IPR012348 Ribonucleotide reductase-like GO:0016491|GO:0055114 Reactome: R-HSA-499943 GYO_2098 a1d8b660f15e144c84a8b7860f358c32 329 Pfam PF00268 Ribonucleotide reductase, small chain 8 284 3.5E-82 T 14-10-2018 IPR000358 Ribonucleotide reductase small subunit family GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 GYO_2098 a1d8b660f15e144c84a8b7860f358c32 329 TIGRFAM TIGR04171 RNR_1b_NrdF: ribonucleoside-diphosphate reductase, class 1b, beta subunit 5 322 1.8E-147 T 14-10-2018 IPR026494 Ribonucleoside reductase subunit beta, NrdF GO:0005971|GO:0009263 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 GYO_2098 a1d8b660f15e144c84a8b7860f358c32 329 PIRSF PIRSF000355 1 319 5.2E-97 T 14-10-2018 IPR000358 Ribonucleotide reductase small subunit family GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 GYO_2098 a1d8b660f15e144c84a8b7860f358c32 329 ProSitePatterns PS00368 Ribonucleotide reductase small subunit signature. 96 113 - T 14-10-2018 IPR030475 Ribonucleotide reductase small subunit, acitve site KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 GYO_2497 d0b8fd9f5a3428f66471cf81c5b788f2 362 Gene3D G3DSA:1.20.1090.10 173 358 6.1E-54 T 14-10-2018 GYO_2497 d0b8fd9f5a3428f66471cf81c5b788f2 362 Hamap MF_00110 3-dehydroquinate synthase [aroB]. 1 359 68.036 T 14-10-2018 IPR016037 3-dehydroquinate synthase AroB GO:0003856|GO:0005737|GO:0009073 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 GYO_2497 d0b8fd9f5a3428f66471cf81c5b788f2 362 SUPERFAMILY SSF56796 4 353 5.23E-97 T 14-10-2018 GYO_2497 d0b8fd9f5a3428f66471cf81c5b788f2 362 Gene3D G3DSA:3.40.50.1970 1 172 2.3E-60 T 14-10-2018 GYO_2497 d0b8fd9f5a3428f66471cf81c5b788f2 362 Pfam PF01761 3-dehydroquinate synthase 68 323 3.6E-97 T 14-10-2018 IPR030960 3-dehydroquinate synthase domain KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 GYO_2497 d0b8fd9f5a3428f66471cf81c5b788f2 362 TIGRFAM TIGR01357 aroB: 3-dehydroquinate synthase 13 348 5.4E-124 T 14-10-2018 IPR016037 3-dehydroquinate synthase AroB GO:0003856|GO:0005737|GO:0009073 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 GYO_2497 d0b8fd9f5a3428f66471cf81c5b788f2 362 PIRSF PIRSF001455 3 361 6.1E-105 T 14-10-2018 IPR030963 3-dehydroquinate synthase family GO:0009073|GO:0016838 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 GYO_2657 75323eefea0d876cafce8a4e8fb84ff1 301 Pfam PF13714 Phosphoenolpyruvate phosphomutase 18 255 2.7E-53 T 14-10-2018 GYO_2657 75323eefea0d876cafce8a4e8fb84ff1 301 Hamap MF_01939 2-methylisocitrate lyase [prpB]. 12 296 46.601 T 14-10-2018 IPR012695 2-methylisocitrate lyase GO:0019629|GO:0046421 KEGG: 00640+4.1.3.30|MetaCyc: PWY-5747 GYO_2657 75323eefea0d876cafce8a4e8fb84ff1 301 TIGRFAM TIGR02317 prpB: methylisocitrate lyase 16 295 1.9E-131 T 14-10-2018 IPR012695 2-methylisocitrate lyase GO:0019629|GO:0046421 KEGG: 00640+4.1.3.30|MetaCyc: PWY-5747 GYO_2657 75323eefea0d876cafce8a4e8fb84ff1 301 Gene3D G3DSA:3.20.20.60 1 301 1.5E-110 T 14-10-2018 GYO_2657 75323eefea0d876cafce8a4e8fb84ff1 301 SUPERFAMILY SSF51621 9 294 2.02E-96 T 14-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 GYO_2657 75323eefea0d876cafce8a4e8fb84ff1 301 ProSitePatterns PS00161 Isocitrate lyase signature. 127 132 - T 14-10-2018 IPR018523 Isocitrate lyase/phosphorylmutase, conserved site GO:0003824 GYO_3906 7680bde8daa72bd7d113a94979cd5132 397 SUPERFAMILY SSF53756 40 387 7.85E-25 T 14-10-2018 GYO_3906 7680bde8daa72bd7d113a94979cd5132 397 Pfam PF13692 Glycosyl transferases group 1 224 358 3.2E-10 T 14-10-2018 GYO_3906 7680bde8daa72bd7d113a94979cd5132 397 Gene3D G3DSA:3.40.50.2000 140 213 3.5E-6 T 14-10-2018 GYO_3906 7680bde8daa72bd7d113a94979cd5132 397 Gene3D G3DSA:3.40.50.2000 214 369 1.3E-29 T 14-10-2018 GYO_2659 cb27659499f88b6ed07f8c415f5a2478 372 PIRSF PIRSF001369 1 372 7.6E-144 T 14-10-2018 IPR024176 Citrate synthase, bacterial-type GYO_2659 cb27659499f88b6ed07f8c415f5a2478 372 SUPERFAMILY SSF48256 7 369 2.88E-116 T 14-10-2018 IPR036969 Citrate synthase superfamily GO:0046912 GYO_2659 cb27659499f88b6ed07f8c415f5a2478 372 PRINTS PR00143 Citrate synthase signature 177 192 6.7E-34 T 14-10-2018 IPR002020 Citrate synthase GO:0046912 GYO_2659 cb27659499f88b6ed07f8c415f5a2478 372 PRINTS PR00143 Citrate synthase signature 199 227 6.7E-34 T 14-10-2018 IPR002020 Citrate synthase GO:0046912 GYO_2659 cb27659499f88b6ed07f8c415f5a2478 372 PRINTS PR00143 Citrate synthase signature 310 326 6.7E-34 T 14-10-2018 IPR002020 Citrate synthase GO:0046912 GYO_2659 cb27659499f88b6ed07f8c415f5a2478 372 PRINTS PR00143 Citrate synthase signature 128 141 6.7E-34 T 14-10-2018 IPR002020 Citrate synthase GO:0046912 GYO_2659 cb27659499f88b6ed07f8c415f5a2478 372 PRINTS PR00143 Citrate synthase signature 330 344 6.7E-34 T 14-10-2018 IPR002020 Citrate synthase GO:0046912 GYO_2659 cb27659499f88b6ed07f8c415f5a2478 372 PRINTS PR00143 Citrate synthase signature 252 272 6.7E-34 T 14-10-2018 IPR002020 Citrate synthase GO:0046912 GYO_2659 cb27659499f88b6ed07f8c415f5a2478 372 Pfam PF00285 Citrate synthase, C-terminal domain 10 360 9.6E-111 T 14-10-2018 IPR002020 Citrate synthase GO:0046912 GYO_2659 cb27659499f88b6ed07f8c415f5a2478 372 Gene3D G3DSA:1.10.580.10 32 356 4.9E-108 T 14-10-2018 IPR016142 Citrate synthase-like, large alpha subdomain Reactome: R-HSA-1268020|Reactome: R-HSA-71403 GYO_2659 cb27659499f88b6ed07f8c415f5a2478 372 ProSitePatterns PS00480 Citrate synthase signature. 259 272 - T 14-10-2018 IPR019810 Citrate synthase active site GO:0006099|GO:0046912 Reactome: R-HSA-1268020|Reactome: R-HSA-71403 GYO_2659 cb27659499f88b6ed07f8c415f5a2478 372 Gene3D G3DSA:1.10.230.10 225 324 4.9E-108 T 14-10-2018 IPR016143 Citrate synthase-like, small alpha subdomain GYO_0064 10adee8760772c79fde7ace06ff5abe2 188 ProSitePatterns PS01196 Peptidyl-tRNA hydrolase signature 2. 107 117 - T 14-10-2018 IPR018171 Peptidyl-tRNA hydrolase, conserved site GO:0004045 MetaCyc: PWY-6308 GYO_0064 10adee8760772c79fde7ace06ff5abe2 188 SUPERFAMILY SSF53178 1 185 1.23E-70 T 14-10-2018 IPR036416 Peptidyl-tRNA hydrolase superfamily GO:0004045 MetaCyc: PWY-6308 GYO_0064 10adee8760772c79fde7ace06ff5abe2 188 ProSitePatterns PS01195 Peptidyl-tRNA hydrolase signature 1. 14 27 - T 14-10-2018 IPR018171 Peptidyl-tRNA hydrolase, conserved site GO:0004045 MetaCyc: PWY-6308 GYO_0064 10adee8760772c79fde7ace06ff5abe2 188 Gene3D G3DSA:3.40.50.1470 1 188 2.3E-73 T 14-10-2018 IPR036416 Peptidyl-tRNA hydrolase superfamily GO:0004045 MetaCyc: PWY-6308 GYO_0064 10adee8760772c79fde7ace06ff5abe2 188 Pfam PF01195 Peptidyl-tRNA hydrolase 3 185 1.0E-60 T 14-10-2018 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 GYO_0064 10adee8760772c79fde7ace06ff5abe2 188 TIGRFAM TIGR00447 pth: aminoacyl-tRNA hydrolase 1 186 4.7E-78 T 14-10-2018 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 GYO_0064 10adee8760772c79fde7ace06ff5abe2 188 Hamap MF_00083 Peptidyl-tRNA hydrolase [pth]. 1 178 38.112 T 14-10-2018 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 GYO_3968 d8a4ba7ce6888405e213bd342f64e40b 197 Pfam PF02417 Chromate transporter 9 173 4.7E-35 T 14-10-2018 IPR003370 Chromate transporter GO:0015109|GO:0015703 GYO_3057 4863efca599773bdf068df6d024aa8bc 324 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 121 135 8.8E-59 T 14-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 GYO_3057 4863efca599773bdf068df6d024aa8bc 324 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 241 257 8.8E-59 T 14-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 GYO_3057 4863efca599773bdf068df6d024aa8bc 324 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 151 170 8.8E-59 T 14-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 GYO_3057 4863efca599773bdf068df6d024aa8bc 324 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 189 208 8.8E-59 T 14-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 GYO_3057 4863efca599773bdf068df6d024aa8bc 324 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 266 281 8.8E-59 T 14-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 GYO_3057 4863efca599773bdf068df6d024aa8bc 324 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 296 315 8.8E-59 T 14-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 GYO_3057 4863efca599773bdf068df6d024aa8bc 324 ProSitePatterns PS00169 Delta-aminolevulinic acid dehydratase active site. 241 253 - T 14-10-2018 IPR030656 Delta-aminolevulinic acid dehydratase, active site KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 GYO_3057 4863efca599773bdf068df6d024aa8bc 324 SUPERFAMILY SSF51569 4 323 7.45E-144 T 14-10-2018 GYO_3057 4863efca599773bdf068df6d024aa8bc 324 PIRSF PIRSF001415 1 324 8.8E-156 T 14-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 GYO_3057 4863efca599773bdf068df6d024aa8bc 324 SMART SM01004 3 322 6.2E-239 T 14-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 GYO_3057 4863efca599773bdf068df6d024aa8bc 324 Gene3D G3DSA:3.20.20.70 1 323 2.3E-152 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 GYO_3057 4863efca599773bdf068df6d024aa8bc 324 Pfam PF00490 Delta-aminolevulinic acid dehydratase 6 321 2.9E-152 T 14-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 GYO_2728 e229c77b3584d83e89514c9085b00d09 55 Pfam PF15980 Putative Competence protein ComGF 1 42 3.4E-7 T 14-10-2018 IPR016977 Competence operon G, ComGF GYO_2173 9e12c58e414d43ff22d9c4878019a2c9 138 Gene3D G3DSA:3.10.129.10 2 128 7.2E-35 T 14-10-2018 GYO_2173 9e12c58e414d43ff22d9c4878019a2c9 138 SUPERFAMILY SSF54637 6 133 1.53E-38 T 14-10-2018 IPR029069 HotDog domain superfamily GYO_2173 9e12c58e414d43ff22d9c4878019a2c9 138 Pfam PF03061 Thioesterase superfamily 18 101 3.2E-14 T 14-10-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 GYO_2173 9e12c58e414d43ff22d9c4878019a2c9 138 TIGRFAM TIGR00051 TIGR00051: acyl-CoA thioester hydrolase, YbgC/YbaW family 9 123 9.2E-43 T 14-10-2018 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family GO:0016787 GYO_2173 9e12c58e414d43ff22d9c4878019a2c9 138 PIRSF PIRSF003230 1 137 4.3E-32 T 14-10-2018 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family GO:0016787 GYO_0082 8a0c9ebe97fdf8dd5d80d8c3d23f05c5 637 Gene3D G3DSA:3.40.50.300 147 330 1.3E-70 T 14-10-2018 GYO_0082 8a0c9ebe97fdf8dd5d80d8c3d23f05c5 637 Hamap MF_01458 ATP-dependent zinc metalloprotease FtsH [ftsH]. 3 616 38.772 T 14-10-2018 IPR005936 Peptidase, FtsH GO:0004222|GO:0016020 Reactome: R-HSA-8949664 GYO_0082 8a0c9ebe97fdf8dd5d80d8c3d23f05c5 637 Gene3D G3DSA:1.10.8.60 331 408 5.5E-29 T 14-10-2018 GYO_0082 8a0c9ebe97fdf8dd5d80d8c3d23f05c5 637 Pfam PF01434 Peptidase family M41 391 600 4.3E-90 T 14-10-2018 IPR000642 Peptidase M41 GO:0004222|GO:0005524|GO:0006508 Reactome: R-HSA-8949664 GYO_0082 8a0c9ebe97fdf8dd5d80d8c3d23f05c5 637 SUPERFAMILY SSF52540 151 401 4.35E-72 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase GYO_0082 8a0c9ebe97fdf8dd5d80d8c3d23f05c5 637 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 197 329 1.4E-44 T 14-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 GYO_0082 8a0c9ebe97fdf8dd5d80d8c3d23f05c5 637 ProSitePatterns PS00674 AAA-protein family signature. 300 318 - T 14-10-2018 IPR003960 ATPase, AAA-type, conserved site GO:0005524 GYO_0082 8a0c9ebe97fdf8dd5d80d8c3d23f05c5 637 SUPERFAMILY SSF140990 411 606 2.35E-74 T 14-10-2018 IPR037219 Peptidase M41-like GO:0004222|GO:0005524|GO:0006508 Reactome: R-HSA-8949664 GYO_0082 8a0c9ebe97fdf8dd5d80d8c3d23f05c5 637 Pfam PF06480 FtsH Extracellular 9 103 3.1E-11 T 14-10-2018 IPR011546 Peptidase M41, FtsH extracellular GO:0004222|GO:0005524|GO:0008270|GO:0016021 Reactome: R-HSA-8949664 GYO_0082 8a0c9ebe97fdf8dd5d80d8c3d23f05c5 637 SMART SM00382 193 332 2.2E-25 T 14-10-2018 IPR003593 AAA+ ATPase domain GYO_0082 8a0c9ebe97fdf8dd5d80d8c3d23f05c5 637 Gene3D G3DSA:1.20.58.760 411 617 8.7E-78 T 14-10-2018 GYO_0082 8a0c9ebe97fdf8dd5d80d8c3d23f05c5 637 TIGRFAM TIGR01241 FtsH_fam: ATP-dependent metallopeptidase HflB 109 601 1.5E-249 T 14-10-2018 IPR005936 Peptidase, FtsH GO:0004222|GO:0016020 Reactome: R-HSA-8949664 GYO_0993 ddba5eab56d8f9a1b27587fe20c5cc10 302 SUPERFAMILY SSF53448 5 272 1.21E-19 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases GYO_0993 ddba5eab56d8f9a1b27587fe20c5cc10 302 Pfam PF03407 Nucleotide-diphospho-sugar transferase 24 162 6.1E-5 T 14-10-2018 IPR005069 Nucleotide-diphospho-sugar transferase GYO_3205 0a0aaf2cfb74074984a7c4028d8a1062 381 Pfam PF00266 Aminotransferase class-V 3 359 3.7E-75 T 14-10-2018 IPR000192 Aminotransferase class V domain GYO_3205 0a0aaf2cfb74074984a7c4028d8a1062 381 Gene3D G3DSA:1.10.260.50 13 279 5.6E-124 T 14-10-2018 GYO_3205 0a0aaf2cfb74074984a7c4028d8a1062 381 Gene3D G3DSA:3.40.640.10 59 235 5.6E-124 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 GYO_3205 0a0aaf2cfb74074984a7c4028d8a1062 381 Gene3D G3DSA:3.90.1150.10 3 369 5.6E-124 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 GYO_3205 0a0aaf2cfb74074984a7c4028d8a1062 381 SUPERFAMILY SSF53383 1 370 1.53E-93 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase GYO_3205 0a0aaf2cfb74074984a7c4028d8a1062 381 PIRSF PIRSF005572 1 380 3.8E-104 T 14-10-2018 IPR016454 Cysteine desulfurase KEGG: 00730+2.8.1.7|MetaCyc: PWY-7250 GYO_2915 bc28597604e9af2d93418594f5346185 110 Pfam PF04237 YjbR 12 106 9.4E-22 T 14-10-2018 IPR007351 Uncharacterised protein YjbR GYO_2915 bc28597604e9af2d93418594f5346185 110 SUPERFAMILY SSF142906 1 110 3.79E-36 T 14-10-2018 IPR038056 YjbR-like superfamily GYO_2915 bc28597604e9af2d93418594f5346185 110 Gene3D G3DSA:3.90.1150.30 1 110 2.0E-35 T 14-10-2018 IPR038056 YjbR-like superfamily GYO_4047 7fe770a0b4c6140829bc93ea9673744f 343 TIGRFAM TIGR02870 spore_II_D: stage II sporulation protein D 2 331 4.6E-139 T 14-10-2018 IPR014225 Sporulation stage II, protein D firmicutes GYO_4047 7fe770a0b4c6140829bc93ea9673744f 343 TIGRFAM TIGR02669 SpoIID_LytB: SpoIID/LytB domain 71 330 5.4E-71 T 14-10-2018 IPR013486 Sporulation stage II protein D, amidase enhancer LytB GO:0030435 GYO_4047 7fe770a0b4c6140829bc93ea9673744f 343 Pfam PF08486 Stage II sporulation protein 68 171 1.7E-23 T 14-10-2018 IPR013693 Sporulation stage II protein D, amidase enhancer LytB N-terminal GYO_4453 fe55bba860fc7044992c972b703f9fcb 611 Gene3D G3DSA:3.30.565.10 450 601 9.7E-52 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily GYO_4453 fe55bba860fc7044992c972b703f9fcb 611 PRINTS PR00344 Bacterial sensor protein C-terminal signature 545 555 4.6E-19 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 GYO_4453 fe55bba860fc7044992c972b703f9fcb 611 PRINTS PR00344 Bacterial sensor protein C-terminal signature 562 580 4.6E-19 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 GYO_4453 fe55bba860fc7044992c972b703f9fcb 611 PRINTS PR00344 Bacterial sensor protein C-terminal signature 586 599 4.6E-19 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 GYO_4453 fe55bba860fc7044992c972b703f9fcb 611 PRINTS PR00344 Bacterial sensor protein C-terminal signature 527 541 4.6E-19 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 GYO_4453 fe55bba860fc7044992c972b703f9fcb 611 Pfam PF00512 His Kinase A (phospho-acceptor) domain 377 442 1.3E-17 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 GYO_4453 fe55bba860fc7044992c972b703f9fcb 611 SMART SM00387 488 602 2.7E-44 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase GYO_4453 fe55bba860fc7044992c972b703f9fcb 611 SUPERFAMILY SSF55874 432 600 1.19E-48 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily GYO_4453 fe55bba860fc7044992c972b703f9fcb 611 Gene3D G3DSA:1.10.287.130 368 447 9.9E-29 T 14-10-2018 GYO_4453 fe55bba860fc7044992c972b703f9fcb 611 SUPERFAMILY SSF47384 362 443 1.69E-19 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 GYO_4453 fe55bba860fc7044992c972b703f9fcb 611 SUPERFAMILY SSF158472 204 253 6.93E-10 T 14-10-2018 GYO_4453 fe55bba860fc7044992c972b703f9fcb 611 SMART SM00388 376 443 1.6E-20 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 GYO_4453 fe55bba860fc7044992c972b703f9fcb 611 SUPERFAMILY SSF55785 250 368 7.68E-11 T 14-10-2018 IPR035965 PAS domain superfamily GYO_4453 fe55bba860fc7044992c972b703f9fcb 611 SMART SM00091 263 329 2.5E-6 T 14-10-2018 IPR000014 PAS domain GYO_4453 fe55bba860fc7044992c972b703f9fcb 611 Pfam PF13426 PAS domain 274 369 3.4E-7 T 14-10-2018 IPR000014 PAS domain GYO_4453 fe55bba860fc7044992c972b703f9fcb 611 SMART SM00086 328 370 4.1E-4 T 14-10-2018 IPR001610 PAC motif GYO_4453 fe55bba860fc7044992c972b703f9fcb 611 SMART SM00304 204 256 3.4E-14 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 GYO_4453 fe55bba860fc7044992c972b703f9fcb 611 Gene3D G3DSA:1.10.8.500 203 255 8.2E-9 T 14-10-2018 GYO_4453 fe55bba860fc7044992c972b703f9fcb 611 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 489 600 3.2E-30 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase GYO_4453 fe55bba860fc7044992c972b703f9fcb 611 Gene3D G3DSA:3.30.450.20 271 367 1.5E-21 T 14-10-2018 GYO_4453 fe55bba860fc7044992c972b703f9fcb 611 Pfam PF00672 HAMP domain 204 252 3.9E-12 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 GYO_4453 fe55bba860fc7044992c972b703f9fcb 611 Gene3D G3DSA:3.30.450.20 32 182 1.7E-42 T 14-10-2018 GYO_0686 76f080fd12434690a7a743296fb4011a 93 SUPERFAMILY SSF47598 9 47 5.44E-6 T 14-10-2018 IPR010985 Ribbon-helix-helix GO:0006355 GYO_0686 76f080fd12434690a7a743296fb4011a 93 Pfam PF01402 Ribbon-helix-helix protein, copG family 12 45 5.2E-6 T 14-10-2018 IPR002145 Ribbon-helix-helix protein, CopG GO:0006355 GYO_0686 76f080fd12434690a7a743296fb4011a 93 Gene3D G3DSA:1.10.1220.10 1 93 1.2E-40 T 14-10-2018 IPR013321 Arc-type ribbon-helix-helix GO:0006355 GYO_0220 fe767e055aa0d703ce1ffd8303becb13 339 Gene3D G3DSA:3.90.120.10 179 324 6.9E-54 T 14-10-2018 GYO_0220 fe767e055aa0d703ce1ffd8303becb13 339 TIGRFAM TIGR00675 dcm: DNA (cytosine-5-)-methyltransferase 23 235 5.3E-36 T 14-10-2018 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 GYO_0220 fe767e055aa0d703ce1ffd8303becb13 339 PRINTS PR00105 Cytosine-specific DNA methyltransferase signature 138 152 1.1E-12 T 14-10-2018 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 GYO_0220 fe767e055aa0d703ce1ffd8303becb13 339 PRINTS PR00105 Cytosine-specific DNA methyltransferase signature 184 197 1.1E-12 T 14-10-2018 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 GYO_0220 fe767e055aa0d703ce1ffd8303becb13 339 PRINTS PR00105 Cytosine-specific DNA methyltransferase signature 20 36 1.1E-12 T 14-10-2018 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 GYO_0220 fe767e055aa0d703ce1ffd8303becb13 339 SUPERFAMILY SSF53335 19 336 4.65E-53 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase GYO_0220 fe767e055aa0d703ce1ffd8303becb13 339 Gene3D G3DSA:3.40.50.150 23 331 6.9E-54 T 14-10-2018 GYO_0220 fe767e055aa0d703ce1ffd8303becb13 339 Pfam PF00145 C-5 cytosine-specific DNA methylase 20 227 7.0E-41 T 14-10-2018 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 GYO_0299 fe767e055aa0d703ce1ffd8303becb13 339 Gene3D G3DSA:3.90.120.10 179 324 6.9E-54 T 14-10-2018 GYO_0299 fe767e055aa0d703ce1ffd8303becb13 339 TIGRFAM TIGR00675 dcm: DNA (cytosine-5-)-methyltransferase 23 235 5.3E-36 T 14-10-2018 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 GYO_0299 fe767e055aa0d703ce1ffd8303becb13 339 PRINTS PR00105 Cytosine-specific DNA methyltransferase signature 138 152 1.1E-12 T 14-10-2018 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 GYO_0299 fe767e055aa0d703ce1ffd8303becb13 339 PRINTS PR00105 Cytosine-specific DNA methyltransferase signature 184 197 1.1E-12 T 14-10-2018 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 GYO_0299 fe767e055aa0d703ce1ffd8303becb13 339 PRINTS PR00105 Cytosine-specific DNA methyltransferase signature 20 36 1.1E-12 T 14-10-2018 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 GYO_0299 fe767e055aa0d703ce1ffd8303becb13 339 SUPERFAMILY SSF53335 19 336 4.65E-53 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase GYO_0299 fe767e055aa0d703ce1ffd8303becb13 339 Gene3D G3DSA:3.40.50.150 23 331 6.9E-54 T 14-10-2018 GYO_0299 fe767e055aa0d703ce1ffd8303becb13 339 Pfam PF00145 C-5 cytosine-specific DNA methylase 20 227 7.0E-41 T 14-10-2018 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 GYO_1882 7e0b950e1aab53584bd9d751ca2d7a9c 426 SUPERFAMILY SSF53187 6 420 3.83E-57 T 14-10-2018 GYO_1882 7e0b950e1aab53584bd9d751ca2d7a9c 426 Pfam PF01546 Peptidase family M20/M25/M40 86 416 3.5E-29 T 14-10-2018 IPR002933 Peptidase M20 GO:0016787 GYO_1882 7e0b950e1aab53584bd9d751ca2d7a9c 426 Pfam PF07687 Peptidase dimerisation domain 188 307 4.6E-25 T 14-10-2018 IPR011650 Peptidase M20, dimerisation domain GYO_1882 7e0b950e1aab53584bd9d751ca2d7a9c 426 SUPERFAMILY SSF55031 215 305 4.04E-8 T 14-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain GYO_1882 7e0b950e1aab53584bd9d751ca2d7a9c 426 Gene3D G3DSA:3.40.630.10 38 420 1.4E-86 T 14-10-2018 GYO_1882 7e0b950e1aab53584bd9d751ca2d7a9c 426 Gene3D G3DSA:3.30.70.360 191 325 1.4E-86 T 14-10-2018 GYO_1882 7e0b950e1aab53584bd9d751ca2d7a9c 426 TIGRFAM TIGR01910 DapE-ArgE: peptidase, ArgE/DapE family 20 411 2.2E-139 T 14-10-2018 IPR010182 N-formyl-4-amino-5-aminomethyl-2-methylpyrimidine deformylase/Succinyl-diaminopimelate desuccinylase GYO_1435 46e9a49d85cee71abfb2cde27d931640 63 ProDom PD027277 REPRESSOR COMZ COMG OPERON TRANSCRIPTION POSSIBLE COMPETENCE PROTEIN-RELATED BH2888 REGULATION 3 57 4.0E-25 T 14-10-2018 IPR024558 ComZ GYO_1435 46e9a49d85cee71abfb2cde27d931640 63 Pfam PF10815 ComZ 4 58 3.6E-33 T 14-10-2018 IPR024558 ComZ GYO_0474 68cb8d4595bad873f8f5d33d815a3598 318 Gene3D G3DSA:3.30.565.10 164 316 2.5E-14 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily GYO_0474 68cb8d4595bad873f8f5d33d815a3598 318 Pfam PF14501 GHKL domain 210 315 3.9E-13 T 14-10-2018 IPR032834 Sensor histidine kinase NatK, C-terminal domain GYO_0474 68cb8d4595bad873f8f5d33d815a3598 318 SUPERFAMILY SSF55874 175 306 1.26E-12 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily GYO_0474 68cb8d4595bad873f8f5d33d815a3598 318 SMART SM00387 211 318 1.2E-4 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase GYO_2955 322bf5526c7c9dd3078d67c8a2c457e7 180 Gene3D G3DSA:3.40.50.150 4 173 7.0E-22 T 14-10-2018 GYO_2955 322bf5526c7c9dd3078d67c8a2c457e7 180 Pfam PF08241 Methyltransferase domain 43 140 2.4E-13 T 14-10-2018 IPR013216 Methyltransferase type 11 GO:0008168 GYO_2955 322bf5526c7c9dd3078d67c8a2c457e7 180 SUPERFAMILY SSF53335 17 168 3.14E-20 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase GYO_2831 78c8613f64db96298e9ee87beb3819ed 247 Pfam PF13649 Methyltransferase domain 36 131 2.6E-22 T 14-10-2018 GYO_2831 78c8613f64db96298e9ee87beb3819ed 247 Gene3D G3DSA:3.40.50.150 6 238 1.5E-86 T 14-10-2018 GYO_2831 78c8613f64db96298e9ee87beb3819ed 247 SUPERFAMILY SSF53335 3 241 3.73E-56 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase GYO_2831 78c8613f64db96298e9ee87beb3819ed 247 Gene3D G3DSA:2.20.25.110 139 200 1.5E-86 T 14-10-2018 GYO_1275 c4d7f60c4c54d3069496d00814b67140 501 SUPERFAMILY SSF102114 154 482 7.32E-70 T 14-10-2018 GYO_1275 c4d7f60c4c54d3069496d00814b67140 501 Pfam PF04055 Radical SAM superfamily 178 349 1.5E-18 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 GYO_1275 c4d7f60c4c54d3069496d00814b67140 501 SMART SM00729 170 394 4.4E-46 T 14-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 GYO_1275 c4d7f60c4c54d3069496d00814b67140 501 TIGRFAM TIGR03994 rSAM_HemZ: coproporphyrinogen dehydrogenase HemZ 87 488 1.7E-148 T 14-10-2018 IPR023995 Oxygen-independent coproporphyrinogen-III oxidase-like protein HemZ GYO_1275 c4d7f60c4c54d3069496d00814b67140 501 Gene3D G3DSA:3.80.30.20 124 489 2.1E-66 T 14-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe GYO_1526 8b9a2693a4d232e5f3ec8eefda2632ee 205 Pfam PF00293 NUDIX domain 72 158 3.1E-10 T 14-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 GYO_1526 8b9a2693a4d232e5f3ec8eefda2632ee 205 SUPERFAMILY SSF55811 49 197 1.9E-27 T 14-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 GYO_1526 8b9a2693a4d232e5f3ec8eefda2632ee 205 Pfam PF12535 Hydrolase of X-linked nucleoside diphosphate N terminal 4 57 2.0E-23 T 14-10-2018 GYO_1526 8b9a2693a4d232e5f3ec8eefda2632ee 205 Gene3D G3DSA:3.90.79.10 42 205 1.0E-36 T 14-10-2018 GYO_3296 0c87fa278617cbc219508e8b1798efeb 292 SUPERFAMILY SSF52540 2 218 1.36E-48 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase GYO_3296 0c87fa278617cbc219508e8b1798efeb 292 SMART SM00382 26 203 2.6E-10 T 14-10-2018 IPR003593 AAA+ ATPase domain GYO_3296 0c87fa278617cbc219508e8b1798efeb 292 Gene3D G3DSA:3.40.50.300 1 237 5.7E-49 T 14-10-2018 GYO_3296 0c87fa278617cbc219508e8b1798efeb 292 Pfam PF00005 ABC transporter 17 154 3.0E-22 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 GYO_3221 e7797168ca4cb23495102c7000361e32 272 Pfam PF01618 MotA/TolQ/ExbB proton channel family 105 220 2.8E-23 T 14-10-2018 IPR002898 MotA/TolQ/ExbB proton channel GYO_3221 e7797168ca4cb23495102c7000361e32 272 ProSitePatterns PS01307 Flagellar motor protein motA family signature. 190 207 - T 14-10-2018 IPR000540 Flagellar motor protein MotA, conserved site GYO_0410 9bbc92e06e73e0e6badc508c6f27ff27 726 Gene3D G3DSA:3.20.20.80 284 502 8.1E-57 T 14-10-2018 GYO_0410 9bbc92e06e73e0e6badc508c6f27ff27 726 SUPERFAMILY SSF47090 79 136 7.38E-12 T 14-10-2018 IPR036365 PGBD-like superfamily GYO_0410 9bbc92e06e73e0e6badc508c6f27ff27 726 SUPERFAMILY SSF47090 209 277 1.16E-12 T 14-10-2018 IPR036365 PGBD-like superfamily GYO_0410 9bbc92e06e73e0e6badc508c6f27ff27 726 SUPERFAMILY SSF51445 289 480 1.79E-45 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily GYO_0410 9bbc92e06e73e0e6badc508c6f27ff27 726 Pfam PF01471 Putative peptidoglycan binding domain 223 276 2.1E-9 T 14-10-2018 IPR002477 Peptidoglycan binding-like GYO_0410 9bbc92e06e73e0e6badc508c6f27ff27 726 Pfam PF01471 Putative peptidoglycan binding domain 84 134 2.8E-9 T 14-10-2018 IPR002477 Peptidoglycan binding-like GYO_0410 9bbc92e06e73e0e6badc508c6f27ff27 726 Gene3D G3DSA:1.10.101.10 205 283 8.6E-7 T 14-10-2018 IPR036366 PGBD superfamily Reactome: R-HSA-1442490|Reactome: R-HSA-1474228 GYO_0410 9bbc92e06e73e0e6badc508c6f27ff27 726 Gene3D G3DSA:1.10.101.10 82 142 3.0E-9 T 14-10-2018 IPR036366 PGBD superfamily Reactome: R-HSA-1442490|Reactome: R-HSA-1474228 GYO_0410 9bbc92e06e73e0e6badc508c6f27ff27 726 Pfam PF08924 Domain of unknown function (DUF1906) 299 433 3.8E-38 T 14-10-2018 IPR015020 Protein of unknown function DUF1906 GYO_2330 dcc3fdfa0ae14d092283548c82d9c605 114 Gene3D G3DSA:2.30.29.50 4 113 1.4E-29 T 14-10-2018 IPR037063 Bacterial Pleckstrin homology domain superfamily GYO_2330 dcc3fdfa0ae14d092283548c82d9c605 114 SUPERFAMILY SSF50729 5 112 2.03E-27 T 14-10-2018 GYO_2330 dcc3fdfa0ae14d092283548c82d9c605 114 Pfam PF08000 Bacterial PH domain 12 111 6.0E-24 T 14-10-2018 IPR012544 Bacterial Pleckstrin homology domain GYO_3588 3a24afa8a923379798eb0b61971577ef 302 SUPERFAMILY SSF51730 34 297 1.53E-73 T 14-10-2018 IPR029041 FAD-linked oxidoreductase-like GYO_3588 3a24afa8a923379798eb0b61971577ef 302 Pfam PF01619 Proline dehydrogenase 41 295 2.7E-36 T 14-10-2018 IPR002872 Proline dehydrogenase domain KEGG: 00330+1.5.5.2|MetaCyc: PWY-5737|MetaCyc: PWY-6922|Reactome: R-HSA-70688 GYO_3588 3a24afa8a923379798eb0b61971577ef 302 Gene3D G3DSA:3.20.20.530 18 302 2.1E-95 T 14-10-2018 GYO_3588 3a24afa8a923379798eb0b61971577ef 302 PIRSF PIRSF000196 1 302 6.7E-129 T 14-10-2018 IPR008219 Proline dehydrogenase, bacteria and archaea GO:0004657|GO:0010133 KEGG: 00330+1.5.5.2|MetaCyc: PWY-5737|MetaCyc: PWY-6922 GYO_2958 3b55a229a2b01eb11fd14624cc1cb8fe 49 TIGRFAM TIGR02413 Bac_small_yrzI: Bacillus tandem small hypothetical protein 1 48 2.9E-22 T 14-10-2018 IPR012655 Uncharacterised protein YrzI GYO_2958 3b55a229a2b01eb11fd14624cc1cb8fe 49 Pfam PF09501 Probable sporulation protein (Bac_small_yrzI) 1 44 6.7E-22 T 14-10-2018 IPR012655 Uncharacterised protein YrzI GYO_0440 7ab6f7eda4753997a1a9c31609dd62e0 478 PRINTS PR00175 Sodium/alanine symporter signature 301 319 7.9E-55 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 GYO_0440 7ab6f7eda4753997a1a9c31609dd62e0 478 PRINTS PR00175 Sodium/alanine symporter signature 182 200 7.9E-55 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 GYO_0440 7ab6f7eda4753997a1a9c31609dd62e0 478 PRINTS PR00175 Sodium/alanine symporter signature 346 368 7.9E-55 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 GYO_0440 7ab6f7eda4753997a1a9c31609dd62e0 478 PRINTS PR00175 Sodium/alanine symporter signature 92 114 7.9E-55 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 GYO_0440 7ab6f7eda4753997a1a9c31609dd62e0 478 PRINTS PR00175 Sodium/alanine symporter signature 406 426 7.9E-55 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 GYO_0440 7ab6f7eda4753997a1a9c31609dd62e0 478 PRINTS PR00175 Sodium/alanine symporter signature 210 229 7.9E-55 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 GYO_0440 7ab6f7eda4753997a1a9c31609dd62e0 478 ProSitePatterns PS00873 Sodium:alanine symporter family signature. 92 107 - T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 GYO_0440 7ab6f7eda4753997a1a9c31609dd62e0 478 Pfam PF01235 Sodium:alanine symporter family 57 449 4.1E-159 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 GYO_0440 7ab6f7eda4753997a1a9c31609dd62e0 478 TIGRFAM TIGR00835 agcS: amino acid carrier protein 17 437 8.6E-156 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 GYO_0754 2acf6c17c75ee60f107b6f9d2eddf60d 141 SUPERFAMILY SSF54637 2 139 3.62E-29 T 14-10-2018 IPR029069 HotDog domain superfamily GYO_0754 2acf6c17c75ee60f107b6f9d2eddf60d 141 Gene3D G3DSA:3.10.129.10 1 141 6.2E-35 T 14-10-2018 GYO_0754 2acf6c17c75ee60f107b6f9d2eddf60d 141 Pfam PF01575 MaoC like domain 7 114 6.3E-29 T 14-10-2018 IPR002539 MaoC-like dehydratase domain GYO_3286 e91e0e70c3295ca7f76124f24a493fd1 397 Pfam PF07690 Major Facilitator Superfamily 8 225 7.8E-22 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 GYO_3286 e91e0e70c3295ca7f76124f24a493fd1 397 SUPERFAMILY SSF103473 3 387 2.75E-56 T 14-10-2018 IPR036259 MFS transporter superfamily GYO_3286 e91e0e70c3295ca7f76124f24a493fd1 397 Gene3D G3DSA:1.20.1250.20 1 190 4.8E-23 T 14-10-2018 GYO_3286 e91e0e70c3295ca7f76124f24a493fd1 397 Gene3D G3DSA:1.20.1250.20 191 396 1.7E-21 T 14-10-2018 GYO_1335 8c7d714636ddfef4b78ec0f8cf98a978 323 Gene3D G3DSA:3.40.50.1980 28 138 3.6E-32 T 14-10-2018 GYO_1335 8c7d714636ddfef4b78ec0f8cf98a978 323 Pfam PF01497 Periplasmic binding protein 52 294 1.4E-35 T 14-10-2018 IPR002491 ABC transporter periplasmic binding domain GYO_1335 8c7d714636ddfef4b78ec0f8cf98a978 323 Gene3D G3DSA:3.40.50.1980 140 322 3.3E-47 T 14-10-2018 GYO_1335 8c7d714636ddfef4b78ec0f8cf98a978 323 SUPERFAMILY SSF53807 35 316 4.77E-62 T 14-10-2018 GYO_0460 1733aa103b91743aa0b89e226665bb9b 142 Pfam PF07486 Cell Wall Hydrolase 24 128 3.5E-19 T 14-10-2018 IPR011105 Cell wall hydrolase, SleB GO:0016787 GYO_0460 1733aa103b91743aa0b89e226665bb9b 142 Gene3D G3DSA:1.10.10.2520 8 91 7.7E-13 T 14-10-2018 GYO_1440 1e74388860d22b1f3fdb5de41d8c0925 328 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 235 299 5.2E-21 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 GYO_1440 1e74388860d22b1f3fdb5de41d8c0925 328 Gene3D G3DSA:3.40.50.300 1 327 9.9E-101 T 14-10-2018 GYO_1440 1e74388860d22b1f3fdb5de41d8c0925 328 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 233 319 2.3E-28 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 GYO_1440 1e74388860d22b1f3fdb5de41d8c0925 328 SMART SM00382 33 234 2.3E-13 T 14-10-2018 IPR003593 AAA+ ATPase domain GYO_1440 1e74388860d22b1f3fdb5de41d8c0925 328 ProSitePatterns PS00211 ABC transporters family signature. 156 170 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 GYO_1440 1e74388860d22b1f3fdb5de41d8c0925 328 Pfam PF00005 ABC transporter 25 183 6.4E-30 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 GYO_1440 1e74388860d22b1f3fdb5de41d8c0925 328 SUPERFAMILY SSF52540 4 254 1.82E-69 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase GYO_2752 019dbe17216273d36df5c8f8a0885798 507 Gene3D G3DSA:1.25.40.10 384 507 1.7E-17 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 GYO_2752 019dbe17216273d36df5c8f8a0885798 507 Pfam PF01694 Rhomboid family 218 353 2.9E-39 T 14-10-2018 IPR022764 Peptidase S54, rhomboid domain GO:0004252|GO:0016021 GYO_2752 019dbe17216273d36df5c8f8a0885798 507 Pfam PF14559 Tetratricopeptide repeat 438 501 2.3E-9 T 14-10-2018 GYO_2752 019dbe17216273d36df5c8f8a0885798 507 SUPERFAMILY SSF48452 393 503 1.95E-15 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 GYO_2752 019dbe17216273d36df5c8f8a0885798 507 Gene3D G3DSA:1.20.1540.10 171 357 1.3E-48 T 14-10-2018 IPR035952 Rhomboid-like superfamily GYO_2752 019dbe17216273d36df5c8f8a0885798 507 SUPERFAMILY SSF144091 175 353 3.14E-45 T 14-10-2018 GYO_2752 019dbe17216273d36df5c8f8a0885798 507 SMART SM00028 458 491 1.1 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 GYO_2752 019dbe17216273d36df5c8f8a0885798 507 SMART SM00028 424 457 1.6 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 GYO_0345 87506d837f8e51bf07317c0319093aa7 407 Pfam PF07690 Major Facilitator Superfamily 214 388 1.9E-17 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 GYO_0345 87506d837f8e51bf07317c0319093aa7 407 Gene3D G3DSA:1.20.1250.20 4 182 2.2E-17 T 14-10-2018 GYO_0345 87506d837f8e51bf07317c0319093aa7 407 Gene3D G3DSA:1.20.1250.20 205 385 3.0E-27 T 14-10-2018 GYO_0345 87506d837f8e51bf07317c0319093aa7 407 SUPERFAMILY SSF103473 3 398 4.05E-47 T 14-10-2018 IPR036259 MFS transporter superfamily GYO_2016 eff91d560bffdf0e4f83022ebb0c46d0 91 Gene3D G3DSA:3.30.1230.10 1 91 4.3E-36 T 14-10-2018 IPR035931 YlxR-like superfamily GYO_2016 eff91d560bffdf0e4f83022ebb0c46d0 91 SUPERFAMILY SSF64376 5 88 2.75E-28 T 14-10-2018 IPR035931 YlxR-like superfamily GYO_2016 eff91d560bffdf0e4f83022ebb0c46d0 91 Pfam PF04296 Protein of unknown function (DUF448) 10 82 2.6E-28 T 14-10-2018 IPR007393 Domain of unknown function DUF448 GYO_0486 ccfb59aa95c6c5abc347f54a33c022ca 563 Gene3D G3DSA:2.60.40.1180 482 558 5.0E-20 T 14-10-2018 IPR013780 Glycosyl hydrolase, all-beta GYO_0486 ccfb59aa95c6c5abc347f54a33c022ca 563 Pfam PF16657 Maltogenic Amylase, C-terminal domain 481 532 1.4E-6 T 14-10-2018 IPR032091 Maltogenic Amylase, C-terminal GYO_0486 ccfb59aa95c6c5abc347f54a33c022ca 563 Gene3D G3DSA:3.20.20.80 5 473 2.0E-193 T 14-10-2018 GYO_0486 ccfb59aa95c6c5abc347f54a33c022ca 563 SUPERFAMILY SSF51011 481 558 2.88E-17 T 14-10-2018 GYO_0486 ccfb59aa95c6c5abc347f54a33c022ca 563 Gene3D G3DSA:3.90.400.10 105 174 2.0E-193 T 14-10-2018 GYO_0486 ccfb59aa95c6c5abc347f54a33c022ca 563 SUPERFAMILY SSF51445 3 478 1.8E-149 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily GYO_0486 ccfb59aa95c6c5abc347f54a33c022ca 563 SMART SM00642 13 420 9.7E-154 T 14-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 GYO_0486 ccfb59aa95c6c5abc347f54a33c022ca 563 Pfam PF00128 Alpha amylase, catalytic domain 28 376 2.6E-116 T 14-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 GYO_4153 c15f1893d070adf0fa2b44a2fc529e03 254 SUPERFAMILY SSF54909 13 252 1.61E-95 T 14-10-2018 IPR011008 Dimeric alpha-beta barrel GYO_4153 c15f1893d070adf0fa2b44a2fc529e03 254 Pfam PF06778 Chlorite dismutase 39 243 5.4E-78 T 14-10-2018 IPR010644 Putative heme-dependent peroxidase/Chlorite dismutase GYO_4153 c15f1893d070adf0fa2b44a2fc529e03 254 Hamap MF_01442 Putative heme-dependent peroxidase . 7 254 57.395 T 14-10-2018 IPR031332 Putative heme-dependent peroxidase, UPF0447 family GYO_4153 c15f1893d070adf0fa2b44a2fc529e03 254 Gene3D G3DSA:3.30.70.1030 7 143 4.5E-53 T 14-10-2018 GYO_4153 c15f1893d070adf0fa2b44a2fc529e03 254 Gene3D G3DSA:3.30.70.1100 144 254 6.8E-48 T 14-10-2018 GYO_0584 9e78f9d686e51aacb283823e60153208 584 Pfam PF12708 Pectate lyase superfamily protein 6 88 1.6E-11 T 14-10-2018 IPR024535 Pectate lyase superfamily protein GYO_0584 9e78f9d686e51aacb283823e60153208 584 SUPERFAMILY SSF51126 3 293 3.29E-35 T 14-10-2018 IPR011050 Pectin lyase fold/virulence factor GYO_0584 9e78f9d686e51aacb283823e60153208 584 SUPERFAMILY SSF51126 327 575 9.67E-12 T 14-10-2018 IPR011050 Pectin lyase fold/virulence factor GYO_0584 9e78f9d686e51aacb283823e60153208 584 Pfam PF13229 Right handed beta helix region 282 436 3.6E-12 T 14-10-2018 IPR039448 Right handed beta helix domain GYO_0584 9e78f9d686e51aacb283823e60153208 584 SMART SM00710 236 266 55.0 T 14-10-2018 IPR006626 Parallel beta-helix repeat GYO_0584 9e78f9d686e51aacb283823e60153208 584 SMART SM00710 278 309 8600.0 T 14-10-2018 IPR006626 Parallel beta-helix repeat GYO_0584 9e78f9d686e51aacb283823e60153208 584 SMART SM00710 529 554 2700.0 T 14-10-2018 IPR006626 Parallel beta-helix repeat GYO_0584 9e78f9d686e51aacb283823e60153208 584 SMART SM00710 100 128 3000.0 T 14-10-2018 IPR006626 Parallel beta-helix repeat GYO_0584 9e78f9d686e51aacb283823e60153208 584 SMART SM00710 313 333 630.0 T 14-10-2018 IPR006626 Parallel beta-helix repeat GYO_0584 9e78f9d686e51aacb283823e60153208 584 SMART SM00710 406 427 130.0 T 14-10-2018 IPR006626 Parallel beta-helix repeat GYO_0584 9e78f9d686e51aacb283823e60153208 584 SMART SM00710 196 225 140.0 T 14-10-2018 IPR006626 Parallel beta-helix repeat GYO_0584 9e78f9d686e51aacb283823e60153208 584 SMART SM00710 173 195 160.0 T 14-10-2018 IPR006626 Parallel beta-helix repeat GYO_0584 9e78f9d686e51aacb283823e60153208 584 SMART SM00710 357 384 5100.0 T 14-10-2018 IPR006626 Parallel beta-helix repeat GYO_0584 9e78f9d686e51aacb283823e60153208 584 SMART SM00710 139 161 2.6 T 14-10-2018 IPR006626 Parallel beta-helix repeat GYO_0584 9e78f9d686e51aacb283823e60153208 584 SMART SM00710 334 356 12.0 T 14-10-2018 IPR006626 Parallel beta-helix repeat GYO_0584 9e78f9d686e51aacb283823e60153208 584 SMART SM00710 456 478 3800.0 T 14-10-2018 IPR006626 Parallel beta-helix repeat GYO_0584 9e78f9d686e51aacb283823e60153208 584 Gene3D G3DSA:2.160.20.10 6 376 5.8E-43 T 14-10-2018 IPR012334 Pectin lyase fold GYO_0584 9e78f9d686e51aacb283823e60153208 584 SMART SM00722 226 383 3.9E-12 T 14-10-2018 IPR006633 Carbohydrate-binding/sugar hydrolysis domain GYO_0584 9e78f9d686e51aacb283823e60153208 584 Gene3D G3DSA:2.160.20.10 377 505 6.3E-7 T 14-10-2018 IPR012334 Pectin lyase fold GYO_1616 51e07cb703ec3a41febefc3e7f65711c 319 SUPERFAMILY SSF52317 9 168 5.04E-49 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like GYO_1616 51e07cb703ec3a41febefc3e7f65711c 319 PIRSF PIRSF028757 8 312 4.8E-88 T 14-10-2018 IPR003507 Peptidase family S66 GYO_1616 51e07cb703ec3a41febefc3e7f65711c 319 Gene3D G3DSA:3.40.50.10740 9 165 8.2E-54 T 14-10-2018 IPR027478 Murein tetrapeptide carboxypeptidase, N-terminal GYO_1616 51e07cb703ec3a41febefc3e7f65711c 319 SUPERFAMILY SSF141986 149 305 4.45E-43 T 14-10-2018 IPR027461 LD-carboxypeptidase A, C-terminal domain superfamily GYO_1616 51e07cb703ec3a41febefc3e7f65711c 319 Pfam PF02016 LD-carboxypeptidase 20 298 3.1E-80 T 14-10-2018 IPR003507 Peptidase family S66 GYO_1616 51e07cb703ec3a41febefc3e7f65711c 319 Gene3D G3DSA:3.50.30.60 175 307 1.9E-42 T 14-10-2018 IPR027461 LD-carboxypeptidase A, C-terminal domain superfamily GYO_3637 2de4f4144476f685c0c88f87bdd04c6b 397 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 62 265 3.1E-8 T 14-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain GYO_3637 2de4f4144476f685c0c88f87bdd04c6b 397 Gene3D G3DSA:2.40.420.20 318 378 4.8E-38 T 14-10-2018 GYO_3637 2de4f4144476f685c0c88f87bdd04c6b 397 Gene3D G3DSA:2.40.50.100 70 224 4.8E-38 T 14-10-2018 GYO_3637 2de4f4144476f685c0c88f87bdd04c6b 397 SUPERFAMILY SSF111369 64 170 9.15E-7 T 14-10-2018 GYO_3637 2de4f4144476f685c0c88f87bdd04c6b 397 Gene3D G3DSA:1.10.287.470 105 187 4.8E-38 T 14-10-2018 GYO_3637 2de4f4144476f685c0c88f87bdd04c6b 397 Gene3D G3DSA:2.40.30.170 60 317 4.8E-38 T 14-10-2018 GYO_4398 7006abd94e68e9328a94fcd4171145af 337 Gene3D G3DSA:2.60.120.10 9 332 3.1E-151 T 14-10-2018 IPR014710 RmlC-like jelly roll fold GYO_4398 7006abd94e68e9328a94fcd4171145af 337 Pfam PF07883 Cupin domain 226 281 5.7E-16 T 14-10-2018 IPR013096 Cupin 2, conserved barrel GYO_4398 7006abd94e68e9328a94fcd4171145af 337 Pfam PF07883 Cupin domain 55 110 3.0E-12 T 14-10-2018 IPR013096 Cupin 2, conserved barrel GYO_4398 7006abd94e68e9328a94fcd4171145af 337 Gene3D G3DSA:2.60.120.10 23 192 3.1E-151 T 14-10-2018 IPR014710 RmlC-like jelly roll fold GYO_4398 7006abd94e68e9328a94fcd4171145af 337 SUPERFAMILY SSF51182 9 328 6.59E-54 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily GYO_1840 c6979916428f26129fca9570757006dc 346 Gene3D G3DSA:3.40.33.10 25 345 2.9E-109 T 14-10-2018 IPR035940 CAP superfamily GYO_1840 c6979916428f26129fca9570757006dc 346 Pfam PF00188 Cysteine-rich secretory protein family 231 340 2.6E-15 T 14-10-2018 IPR014044 CAP domain GYO_1840 c6979916428f26129fca9570757006dc 346 SUPERFAMILY SSF55797 226 342 1.6E-22 T 14-10-2018 IPR035940 CAP superfamily GYO_1840 c6979916428f26129fca9570757006dc 346 Pfam PF14504 CAP-associated N-terminal 61 200 1.3E-52 T 14-10-2018 IPR029410 CAP-associated domain GYO_1784 bf82e56b6ef8e5f7fe99b640dd77290c 104 SUPERFAMILY SSF89447 13 64 1.09E-14 T 14-10-2018 IPR037914 SpoVT-AbrB domain superfamily GYO_1784 bf82e56b6ef8e5f7fe99b640dd77290c 104 Pfam PF04014 Antidote-toxin recognition MazE, bacterial antitoxin 20 62 8.1E-10 T 14-10-2018 IPR007159 SpoVT-AbrB domain GO:0003677 GYO_1784 bf82e56b6ef8e5f7fe99b640dd77290c 104 Gene3D G3DSA:2.10.260.10 6 63 8.5E-24 T 14-10-2018 GYO_1784 bf82e56b6ef8e5f7fe99b640dd77290c 104 SMART SM00966 20 63 4.0E-7 T 14-10-2018 IPR007159 SpoVT-AbrB domain GO:0003677 GYO_2790 fc007a5346e0eb184cf2e7ba4bb016c9 679 Hamap MF_00255 Glycine--tRNA ligase beta subunit [glyS]. 3 676 27.867 T 14-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 GYO_2790 fc007a5346e0eb184cf2e7ba4bb016c9 679 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 50 62 4.3E-39 T 14-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 GYO_2790 fc007a5346e0eb184cf2e7ba4bb016c9 679 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 394 413 4.3E-39 T 14-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 GYO_2790 fc007a5346e0eb184cf2e7ba4bb016c9 679 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 243 258 4.3E-39 T 14-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 GYO_2790 fc007a5346e0eb184cf2e7ba4bb016c9 679 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 315 331 4.3E-39 T 14-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 GYO_2790 fc007a5346e0eb184cf2e7ba4bb016c9 679 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 7 20 4.3E-39 T 14-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 GYO_2790 fc007a5346e0eb184cf2e7ba4bb016c9 679 Pfam PF02092 Glycyl-tRNA synthetase beta subunit 6 541 1.1E-216 T 14-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 GYO_2790 fc007a5346e0eb184cf2e7ba4bb016c9 679 SUPERFAMILY SSF109604 338 491 5.23E-20 T 14-10-2018 GYO_2790 fc007a5346e0eb184cf2e7ba4bb016c9 679 TIGRFAM TIGR00211 glyS: glycine--tRNA ligase, beta subunit 1 677 0.0 T 14-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 GYO_3513 7a47d178aec2515c2ffe90fd8ff9def2 355 SUPERFAMILY SSF51905 1 307 2.07E-26 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily GYO_3513 7a47d178aec2515c2ffe90fd8ff9def2 355 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 266 273 1.6E-6 T 14-10-2018 GYO_3513 7a47d178aec2515c2ffe90fd8ff9def2 355 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 3 25 1.6E-6 T 14-10-2018 GYO_3513 7a47d178aec2515c2ffe90fd8ff9def2 355 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 143 168 1.6E-6 T 14-10-2018 GYO_3513 7a47d178aec2515c2ffe90fd8ff9def2 355 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 225 239 1.6E-6 T 14-10-2018 GYO_3513 7a47d178aec2515c2ffe90fd8ff9def2 355 Gene3D G3DSA:3.50.50.100 1 354 1.3E-76 T 14-10-2018 GYO_3513 7a47d178aec2515c2ffe90fd8ff9def2 355 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 3 287 3.9E-38 T 14-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 GYO_3513 7a47d178aec2515c2ffe90fd8ff9def2 355 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 4 23 3.8E-7 T 14-10-2018 GYO_3513 7a47d178aec2515c2ffe90fd8ff9def2 355 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 96 114 3.8E-7 T 14-10-2018 GYO_3513 7a47d178aec2515c2ffe90fd8ff9def2 355 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 143 161 3.8E-7 T 14-10-2018 GYO_3513 7a47d178aec2515c2ffe90fd8ff9def2 355 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 224 240 3.8E-7 T 14-10-2018 GYO_3513 7a47d178aec2515c2ffe90fd8ff9def2 355 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 251 273 3.8E-7 T 14-10-2018 GYO_1510 aab8152c09e38b1a2e873cb84ce1ff6d 64 Pfam PF13783 Domain of unknown function (DUF4177) 3 59 2.3E-15 T 14-10-2018 IPR025234 Protein of unknown function DUF4177 GYO_1937 7be4ea650ac3ba1787c2c85d55fff858 682 Pfam PF00270 DEAD/DEAH box helicase 260 415 3.9E-19 T 14-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 GYO_1937 7be4ea650ac3ba1787c2c85d55fff858 682 TIGRFAM TIGR00643 recG: ATP-dependent DNA helicase RecG 26 648 2.4E-265 T 14-10-2018 IPR004609 ATP-dependent DNA helicase RecG GO:0004003|GO:0006281|GO:0006310 GYO_1937 7be4ea650ac3ba1787c2c85d55fff858 682 SUPERFAMILY SSF52540 173 436 2.28E-63 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase GYO_1937 7be4ea650ac3ba1787c2c85d55fff858 682 Gene3D G3DSA:1.10.150.20 4 46 5.5E-5 T 14-10-2018 GYO_1937 7be4ea650ac3ba1787c2c85d55fff858 682 SUPERFAMILY SSF50249 5 169 4.45E-31 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold GYO_1937 7be4ea650ac3ba1787c2c85d55fff858 682 Pfam PF17191 RecG wedge domain 9 165 2.7E-17 T 14-10-2018 IPR033454 RecG, wedge domain GYO_1937 7be4ea650ac3ba1787c2c85d55fff858 682 SMART SM00487 253 442 3.8E-34 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain GYO_1937 7be4ea650ac3ba1787c2c85d55fff858 682 Gene3D G3DSA:2.40.50.140 47 138 7.6E-10 T 14-10-2018 GYO_1937 7be4ea650ac3ba1787c2c85d55fff858 682 Pfam PF00271 Helicase conserved C-terminal domain 452 572 2.6E-20 T 14-10-2018 IPR001650 Helicase, C-terminal GYO_1937 7be4ea650ac3ba1787c2c85d55fff858 682 Gene3D G3DSA:3.40.50.300 198 434 1.8E-90 T 14-10-2018 GYO_1937 7be4ea650ac3ba1787c2c85d55fff858 682 Gene3D G3DSA:3.40.50.300 441 613 3.8E-58 T 14-10-2018 GYO_1937 7be4ea650ac3ba1787c2c85d55fff858 682 SMART SM00490 488 573 7.4E-21 T 14-10-2018 IPR001650 Helicase, C-terminal GYO_1937 7be4ea650ac3ba1787c2c85d55fff858 682 SUPERFAMILY SSF52540 436 639 8.64E-44 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase GYO_0976 24d05118b3fc5eaffffb917a8d802d09 120 Gene3D G3DSA:3.10.180.10 1 120 1.2E-32 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase GYO_0976 24d05118b3fc5eaffffb917a8d802d09 120 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 5 116 1.9E-14 T 14-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain GYO_0976 24d05118b3fc5eaffffb917a8d802d09 120 SUPERFAMILY SSF54593 1 118 6.31E-21 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase GYO_2393 90004a4915b983420244bcab1d83848e 141 SUPERFAMILY SSF46785 9 137 1.73E-26 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily GYO_2393 90004a4915b983420244bcab1d83848e 141 PRINTS PR00598 Bacterial regulatory protein MarR family signature 117 137 2.7E-6 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 GYO_2393 90004a4915b983420244bcab1d83848e 141 PRINTS PR00598 Bacterial regulatory protein MarR family signature 87 103 2.7E-6 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 GYO_2393 90004a4915b983420244bcab1d83848e 141 PRINTS PR00598 Bacterial regulatory protein MarR family signature 68 83 2.7E-6 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 GYO_2393 90004a4915b983420244bcab1d83848e 141 Gene3D G3DSA:1.10.10.10 2 140 6.2E-28 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily GYO_2393 90004a4915b983420244bcab1d83848e 141 SMART SM00347 27 127 8.3E-32 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 GYO_2393 90004a4915b983420244bcab1d83848e 141 Pfam PF01047 MarR family 34 91 2.4E-17 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 GYO_1783 c749203042387392e9f6644aea56c15a 335 Pfam PF06723 MreB/Mbl protein 5 331 5.2E-145 T 14-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 GYO_1783 c749203042387392e9f6644aea56c15a 335 SUPERFAMILY SSF53067 5 141 1.41E-37 T 14-10-2018 GYO_1783 c749203042387392e9f6644aea56c15a 335 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 42 60 7.1E-56 T 14-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 GYO_1783 c749203042387392e9f6644aea56c15a 335 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 182 202 7.1E-56 T 14-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 GYO_1783 c749203042387392e9f6644aea56c15a 335 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 295 321 7.1E-56 T 14-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 GYO_1783 c749203042387392e9f6644aea56c15a 335 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 62 85 7.1E-56 T 14-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 GYO_1783 c749203042387392e9f6644aea56c15a 335 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 127 146 7.1E-56 T 14-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 GYO_1783 c749203042387392e9f6644aea56c15a 335 Gene3D G3DSA:3.30.420.40 149 312 2.6E-124 T 14-10-2018 GYO_1783 c749203042387392e9f6644aea56c15a 335 Gene3D G3DSA:3.90.640.10 181 254 2.6E-124 T 14-10-2018 GYO_1783 c749203042387392e9f6644aea56c15a 335 Gene3D G3DSA:3.30.420.40 7 322 2.6E-124 T 14-10-2018 GYO_1783 c749203042387392e9f6644aea56c15a 335 TIGRFAM TIGR00904 mreB: cell shape determining protein, MreB/Mrl family 4 331 7.6E-138 T 14-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 GYO_1783 c749203042387392e9f6644aea56c15a 335 SUPERFAMILY SSF53067 144 329 8.79E-48 T 14-10-2018 GYO_3795 b39c8882b21a05421f011de40c4e06b8 417 SUPERFAMILY SSF53850 43 407 2.22E-80 T 14-10-2018 GYO_3795 b39c8882b21a05421f011de40c4e06b8 417 Gene3D G3DSA:3.40.190.10 53 370 3.9E-130 T 14-10-2018 GYO_3795 b39c8882b21a05421f011de40c4e06b8 417 PRINTS PR00181 Maltose binding protein signature 76 94 9.2E-7 T 14-10-2018 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein GO:0008643|GO:0015144 GYO_3795 b39c8882b21a05421f011de40c4e06b8 417 PRINTS PR00181 Maltose binding protein signature 134 153 9.2E-7 T 14-10-2018 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein GO:0008643|GO:0015144 GYO_3795 b39c8882b21a05421f011de40c4e06b8 417 PRINTS PR00181 Maltose binding protein signature 370 389 9.2E-7 T 14-10-2018 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein GO:0008643|GO:0015144 GYO_3795 b39c8882b21a05421f011de40c4e06b8 417 Pfam PF13416 Bacterial extracellular solute-binding protein 55 353 6.8E-45 T 14-10-2018 IPR006059 Bacterial extracellular solute-binding protein GYO_3795 b39c8882b21a05421f011de40c4e06b8 417 Gene3D G3DSA:3.40.190.10 143 403 3.9E-130 T 14-10-2018 GYO_1167 f67b0152f7f0fef988061e9244fe5d71 59 Pfam PF13040 Fur-regulated basic protein B 13 55 1.5E-16 T 14-10-2018 IPR025004 Transcriptional regulatory protein SenN/SenS GYO_1995 66b8e456a214b9be3b2d1c6ec32dd945 366 Gene3D G3DSA:1.20.120.1380 119 357 1.9E-88 T 14-10-2018 GYO_1995 66b8e456a214b9be3b2d1c6ec32dd945 366 SMART SM00962 175 366 7.0E-55 T 14-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 GYO_1995 66b8e456a214b9be3b2d1c6ec32dd945 366 SUPERFAMILY SSF52540 176 360 5.01E-30 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase GYO_1995 66b8e456a214b9be3b2d1c6ec32dd945 366 Gene3D G3DSA:3.40.50.300 170 354 1.9E-88 T 14-10-2018 GYO_1995 66b8e456a214b9be3b2d1c6ec32dd945 366 Pfam PF00448 SRP54-type protein, GTPase domain 176 364 5.6E-49 T 14-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 GYO_2628 a3fb0379a2052844fc2bf0e4648ac796 307 Pfam PF12706 Beta-lactamase superfamily domain 35 151 1.8E-9 T 14-10-2018 IPR001279 Metallo-beta-lactamase GYO_2628 a3fb0379a2052844fc2bf0e4648ac796 307 Pfam PF12706 Beta-lactamase superfamily domain 201 270 1.3E-9 T 14-10-2018 IPR001279 Metallo-beta-lactamase GYO_2628 a3fb0379a2052844fc2bf0e4648ac796 307 TIGRFAM TIGR02651 RNase_Z: ribonuclease Z 2 303 5.9E-119 T 14-10-2018 IPR013471 Ribonuclease Z/BN GO:0016891|GO:0042779 GYO_2628 a3fb0379a2052844fc2bf0e4648ac796 307 Hamap MF_01818 Ribonuclease BN [rbn]. 1 304 41.668 T 14-10-2018 IPR013471 Ribonuclease Z/BN GO:0016891|GO:0042779 GYO_2628 a3fb0379a2052844fc2bf0e4648ac796 307 SUPERFAMILY SSF56281 2 303 2.3E-86 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like GYO_2628 a3fb0379a2052844fc2bf0e4648ac796 307 Gene3D G3DSA:3.60.15.10 1 304 4.8E-106 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like GYO_3608 1b4d73ed1e78973ba881394505be2295 291 Pfam PF00440 Bacterial regulatory proteins, tetR family 8 53 5.4E-20 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 GYO_3608 1b4d73ed1e78973ba881394505be2295 291 ProSitePatterns PS01081 TetR-type HTH domain signature. 20 51 - T 14-10-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site GYO_3608 1b4d73ed1e78973ba881394505be2295 291 SUPERFAMILY SSF46689 4 68 3.74E-19 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 GYO_3608 1b4d73ed1e78973ba881394505be2295 291 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 8 21 1.3E-10 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 GYO_3608 1b4d73ed1e78973ba881394505be2295 291 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 29 52 1.3E-10 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 GYO_3608 1b4d73ed1e78973ba881394505be2295 291 Gene3D G3DSA:1.10.357.10 1 194 3.1E-29 T 14-10-2018 GYO_2713 d1ca65e355edb5f23dc41c699e2a5ef5 278 Pfam PF03099 Biotin/lipoate A/B protein ligase family 52 189 4.8E-32 T 14-10-2018 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain GO:0006464 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382 GYO_2713 d1ca65e355edb5f23dc41c699e2a5ef5 278 Hamap MF_02118 Octanoyltransferase LipM [lipM]. 3 278 69.648 T 14-10-2018 IPR024898 Octanoyltransferase LipM GO:0009107|GO:0009249|GO:0016415 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382 GYO_2713 d1ca65e355edb5f23dc41c699e2a5ef5 278 SUPERFAMILY SSF55681 5 278 1.91E-70 T 14-10-2018 GYO_2713 d1ca65e355edb5f23dc41c699e2a5ef5 278 Gene3D G3DSA:3.30.930.10 5 278 1.2E-69 T 14-10-2018 GYO_2584 fe23b19c6914df46ce9e3c8366205c6d 271 SUPERFAMILY SSF53167 3 270 7.99E-99 T 14-10-2018 IPR035994 Nucleoside phosphorylase superfamily GO:0003824|GO:0009116 GYO_2584 fe23b19c6914df46ce9e3c8366205c6d 271 Pfam PF01048 Phosphorylase superfamily 21 268 4.9E-57 T 14-10-2018 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 GYO_2584 fe23b19c6914df46ce9e3c8366205c6d 271 TIGRFAM TIGR01697 PNPH-PUNA-XAPA: inosine/guanosine/xanthosine phosphorylase family 21 267 4.7E-111 T 14-10-2018 IPR011268 Purine nucleoside phosphorylase GO:0004731|GO:0006139 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5532|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1|Reactome: R-HSA-6798695|Reactome: R-HSA-74217|Reactome: R-HSA-74259 GYO_2584 fe23b19c6914df46ce9e3c8366205c6d 271 Gene3D G3DSA:3.40.50.1580 1 270 3.3E-117 T 14-10-2018 GYO_2584 fe23b19c6914df46ce9e3c8366205c6d 271 PIRSF PIRSF000477 1 270 2.9E-128 T 14-10-2018 IPR011268 Purine nucleoside phosphorylase GO:0004731|GO:0006139 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5532|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1|Reactome: R-HSA-6798695|Reactome: R-HSA-74217|Reactome: R-HSA-74259 GYO_2584 fe23b19c6914df46ce9e3c8366205c6d 271 TIGRFAM TIGR01700 PNPH: purine nucleoside phosphorylase I, inosine and guanosine-specific 21 268 1.7E-128 T 14-10-2018 IPR011270 Purine nucleoside phosphorylase I, inosine/guanosine-specific GO:0004731|GO:0006139 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5532|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1|Reactome: R-HSA-6798695|Reactome: R-HSA-74217|Reactome: R-HSA-74259 GYO_2584 fe23b19c6914df46ce9e3c8366205c6d 271 ProSitePatterns PS01240 Purine and other phosphorylases family 2 signature. 74 115 - T 14-10-2018 IPR018099 Purine phosphorylase, family 2, conserved site GO:0016763 GYO_4409 ee15d2fc596b64924cebbbe4f3fc2b94 513 SUPERFAMILY SSF53067 4 248 1.7E-66 T 14-10-2018 GYO_4409 ee15d2fc596b64924cebbbe4f3fc2b94 513 SUPERFAMILY SSF53067 249 498 2.59E-65 T 14-10-2018 GYO_4409 ee15d2fc596b64924cebbbe4f3fc2b94 513 TIGRFAM TIGR01314 gntK_FGGY: gluconate kinase 4 507 1.0E-298 T 14-10-2018 IPR006002 Gluconate kinase GO:0019521|GO:0046316 KEGG: 00030+2.7.1.12|MetaCyc: PWY-5530 GYO_4409 ee15d2fc596b64924cebbbe4f3fc2b94 513 ProSitePatterns PS00933 FGGY family of carbohydrate kinases signature 1. 131 143 - T 14-10-2018 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 GYO_4409 ee15d2fc596b64924cebbbe4f3fc2b94 513 ProSitePatterns PS00445 FGGY family of carbohydrate kinases signature 2. 363 383 - T 14-10-2018 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 GYO_4409 ee15d2fc596b64924cebbbe4f3fc2b94 513 Gene3D G3DSA:3.30.420.40 1 247 4.9E-80 T 14-10-2018 GYO_4409 ee15d2fc596b64924cebbbe4f3fc2b94 513 PIRSF PIRSF000538 2 504 1.1E-136 T 14-10-2018 IPR000577 Carbohydrate kinase, FGGY GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 GYO_4409 ee15d2fc596b64924cebbbe4f3fc2b94 513 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 256 451 5.6E-35 T 14-10-2018 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 GYO_4409 ee15d2fc596b64924cebbbe4f3fc2b94 513 Gene3D G3DSA:3.30.420.40 248 513 3.6E-87 T 14-10-2018 GYO_4409 ee15d2fc596b64924cebbbe4f3fc2b94 513 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 4 246 3.8E-82 T 14-10-2018 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 GYO_1611 ce90860728a6336121e3bafa3510fa47 274 PIRSF PIRSF015853 1 271 2.4E-108 T 14-10-2018 IPR007035 Peptidase M55, D-aminopeptidase GYO_1611 ce90860728a6336121e3bafa3510fa47 274 Pfam PF04951 D-aminopeptidase 1 262 5.7E-93 T 14-10-2018 IPR007035 Peptidase M55, D-aminopeptidase GYO_1611 ce90860728a6336121e3bafa3510fa47 274 SUPERFAMILY SSF63992 1 274 4.97E-103 T 14-10-2018 IPR036177 Peptidase M55, D-aminopeptidase superfamily GYO_1611 ce90860728a6336121e3bafa3510fa47 274 Gene3D G3DSA:3.30.1360.130 210 274 1.0E-33 T 14-10-2018 GYO_1611 ce90860728a6336121e3bafa3510fa47 274 Gene3D G3DSA:3.40.50.10780 1 209 3.4E-78 T 14-10-2018 IPR027476 D-aminopeptidase, N-terminal GYO_1972 9330ab2ed6f3256f582913859b904e17 129 Pfam PF00460 Flagella basal body rod protein 8 38 3.2E-9 T 14-10-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 GYO_1972 9330ab2ed6f3256f582913859b904e17 129 PIRSF PIRSF002889 2 128 2.5E-34 T 14-10-2018 IPR006300 Flagellar basal-body rod protein FlgB GO:0030694|GO:0071973 GYO_1972 9330ab2ed6f3256f582913859b904e17 129 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 14 34 - T 14-10-2018 IPR019776 Flagellar basal body rod protein, conserved site GYO_1972 9330ab2ed6f3256f582913859b904e17 129 TIGRFAM TIGR01396 FlgB: flagellar basal-body rod protein FlgB 4 125 1.0E-40 T 14-10-2018 IPR006300 Flagellar basal-body rod protein FlgB GO:0030694|GO:0071973 GYO_3165 6e879f2e720c7cfe14e788f6e0ce09ad 423 ProSitePatterns PS00470 Isocitrate and isopropylmalate dehydrogenases signature. 307 326 - T 14-10-2018 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-71403 GYO_3165 6e879f2e720c7cfe14e788f6e0ce09ad 423 SUPERFAMILY SSF53659 3 422 9.79E-143 T 14-10-2018 GYO_3165 6e879f2e720c7cfe14e788f6e0ce09ad 423 Gene3D G3DSA:3.40.718.10 1 423 4.8E-185 T 14-10-2018 GYO_3165 6e879f2e720c7cfe14e788f6e0ce09ad 423 SMART SM01329 21 418 3.8E-186 T 14-10-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 GYO_3165 6e879f2e720c7cfe14e788f6e0ce09ad 423 Pfam PF00180 Isocitrate/isopropylmalate dehydrogenase 22 417 5.6E-128 T 14-10-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 GYO_3165 6e879f2e720c7cfe14e788f6e0ce09ad 423 TIGRFAM TIGR00183 prok_nadp_idh: isocitrate dehydrogenase, NADP-dependent 2 423 6.9E-231 T 14-10-2018 IPR004439 Isocitrate dehydrogenase NADP-dependent, dimeric, prokaryotic GO:0004450|GO:0006099|GO:0055114 KEGG: 00020+1.1.1.42|KEGG: 00480+1.1.1.42|KEGG: 00720+1.1.1.42|MetaCyc: PWY-5913|MetaCyc: PWY-6549|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7124|MetaCyc: PWY-7254|MetaCyc: PWY-7268 GYO_4275 0f6746810a93e0338437c3434097017f 567 Pfam PF00664 ABC transporter transmembrane region 15 276 1.9E-26 T 14-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 GYO_4275 0f6746810a93e0338437c3434097017f 567 SMART SM00382 352 538 4.3E-17 T 14-10-2018 IPR003593 AAA+ ATPase domain GYO_4275 0f6746810a93e0338437c3434097017f 567 SUPERFAMILY SSF52540 342 562 4.18E-70 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase GYO_4275 0f6746810a93e0338437c3434097017f 567 TIGRFAM TIGR02857 CydD: thiol reductant ABC exporter, CydD subunit 12 534 1.6E-171 T 14-10-2018 IPR014216 ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydD GO:0005524|GO:0016020|GO:0042883 GYO_4275 0f6746810a93e0338437c3434097017f 567 Pfam PF00005 ABC transporter 344 492 2.3E-29 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 GYO_4275 0f6746810a93e0338437c3434097017f 567 Gene3D G3DSA:1.20.1560.10 4 316 1.1E-40 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 GYO_4275 0f6746810a93e0338437c3434097017f 567 Gene3D G3DSA:3.40.50.300 326 567 4.9E-73 T 14-10-2018 GYO_4275 0f6746810a93e0338437c3434097017f 567 ProSitePatterns PS00211 ABC transporters family signature. 464 478 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 GYO_4275 0f6746810a93e0338437c3434097017f 567 SUPERFAMILY SSF90123 8 317 2.88E-48 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 GYO_2744 e9cf10b0987787defa7a9fc5fb77c50e 57 Pfam PF10958 Protein of unknown function (DUF2759) 6 56 1.4E-24 T 14-10-2018 IPR024490 Protein of unknown function DUF2759 GYO_2744 e9cf10b0987787defa7a9fc5fb77c50e 57 ProDom PD052097 RELATED ALKALIPHILY YQGW MEMBRANE TRANSMEMBRANE SPANNING 1 57 5.0E-24 T 14-10-2018 IPR024490 Protein of unknown function DUF2759 GYO_2203 74553dd93f98911ed0458dfaa31a9a6f 399 Pfam PF00698 Acyl transferase domain 6 290 4.1E-32 T 14-10-2018 IPR014043 Acyl transferase GYO_2203 74553dd93f98911ed0458dfaa31a9a6f 399 SUPERFAMILY SSF55048 130 197 4.71E-11 T 14-10-2018 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding GYO_2203 74553dd93f98911ed0458dfaa31a9a6f 399 SUPERFAMILY SSF52151 4 305 1.18E-73 T 14-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GYO_2203 74553dd93f98911ed0458dfaa31a9a6f 399 Gene3D G3DSA:3.40.366.10 5 286 3.3E-91 T 14-10-2018 IPR001227 Acyl transferase domain superfamily GO:0016740 GYO_2203 74553dd93f98911ed0458dfaa31a9a6f 399 TIGRFAM TIGR00128 fabD: malonyl CoA-acyl carrier protein transacylase 4 290 8.8E-99 T 14-10-2018 IPR004410 Malonyl CoA-acyl carrier protein transacylase, FabD-type GO:0004314 KEGG: 00061+2.3.1.39|MetaCyc: PWY-4381|MetaCyc: PWY-6799|MetaCyc: PWY-7388 GYO_2203 74553dd93f98911ed0458dfaa31a9a6f 399 SMART SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. 7 323 1.5E-34 T 14-10-2018 IPR020801 Polyketide synthase, acyl transferase domain GYO_2203 74553dd93f98911ed0458dfaa31a9a6f 399 Gene3D G3DSA:3.30.70.250 128 197 3.3E-91 T 14-10-2018 GYO_1749 f1ebc8b5efea8b7e7ac2108e9435105a 293 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 62 1.6E-16 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 GYO_1749 f1ebc8b5efea8b7e7ac2108e9435105a 293 Gene3D G3DSA:3.40.190.290 85 286 2.6E-66 T 14-10-2018 GYO_1749 f1ebc8b5efea8b7e7ac2108e9435105a 293 SUPERFAMILY SSF53850 88 290 1.33E-26 T 14-10-2018 GYO_1749 f1ebc8b5efea8b7e7ac2108e9435105a 293 SUPERFAMILY SSF46785 1 87 2.23E-18 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily GYO_1749 f1ebc8b5efea8b7e7ac2108e9435105a 293 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 3.0E-6 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 GYO_1749 f1ebc8b5efea8b7e7ac2108e9435105a 293 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 3.0E-6 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 GYO_1749 f1ebc8b5efea8b7e7ac2108e9435105a 293 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 3.0E-6 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 GYO_1749 f1ebc8b5efea8b7e7ac2108e9435105a 293 Pfam PF03466 LysR substrate binding domain 87 286 1.0E-32 T 14-10-2018 IPR005119 LysR, substrate-binding GYO_1749 f1ebc8b5efea8b7e7ac2108e9435105a 293 Gene3D G3DSA:1.10.10.10 1 84 7.4E-22 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily GYO_3145 824695f8deb5d7aa51255ddcef5d11a2 640 Gene3D G3DSA:3.30.930.10 224 537 1.9E-115 T 14-10-2018 GYO_3145 824695f8deb5d7aa51255ddcef5d11a2 640 Gene3D G3DSA:3.40.50.800 538 640 7.2E-35 T 14-10-2018 IPR036621 Anticodon-binding domain superfamily GYO_3145 824695f8deb5d7aa51255ddcef5d11a2 640 Gene3D G3DSA:3.30.54.20 130 186 1.8E-66 T 14-10-2018 GYO_3145 824695f8deb5d7aa51255ddcef5d11a2 640 SUPERFAMILY SSF52954 535 637 8.46E-31 T 14-10-2018 GYO_3145 824695f8deb5d7aa51255ddcef5d11a2 640 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 324 533 1.4E-34 T 14-10-2018 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 GYO_3145 824695f8deb5d7aa51255ddcef5d11a2 640 SUPERFAMILY SSF81271 2 61 1.02E-16 T 14-10-2018 IPR012676 TGS-like KEGG: 00970+6.1.1.3 GYO_3145 824695f8deb5d7aa51255ddcef5d11a2 640 Pfam PF07973 Threonyl and Alanyl tRNA synthetase second additional domain 169 218 5.4E-16 T 14-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 GYO_3145 824695f8deb5d7aa51255ddcef5d11a2 640 TIGRFAM TIGR00418 thrS: threonine--tRNA ligase 72 637 3.4E-247 T 14-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 GYO_3145 824695f8deb5d7aa51255ddcef5d11a2 640 Hamap MF_00184 Threonine--tRNA ligase [thrS]. 66 640 35.481 T 14-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 GYO_3145 824695f8deb5d7aa51255ddcef5d11a2 640 Pfam PF03129 Anticodon binding domain 546 633 3.3E-25 T 14-10-2018 IPR004154 Anticodon-binding GYO_3145 824695f8deb5d7aa51255ddcef5d11a2 640 SUPERFAMILY SSF55681 242 531 1.04E-96 T 14-10-2018 GYO_3145 824695f8deb5d7aa51255ddcef5d11a2 640 PRINTS PR01047 Threonyl-tRNA synthetase signature 363 386 3.1E-47 T 14-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 GYO_3145 824695f8deb5d7aa51255ddcef5d11a2 640 PRINTS PR01047 Threonyl-tRNA synthetase signature 512 525 3.1E-47 T 14-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 GYO_3145 824695f8deb5d7aa51255ddcef5d11a2 640 PRINTS PR01047 Threonyl-tRNA synthetase signature 330 358 3.1E-47 T 14-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 GYO_3145 824695f8deb5d7aa51255ddcef5d11a2 640 PRINTS PR01047 Threonyl-tRNA synthetase signature 539 551 3.1E-47 T 14-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 GYO_3145 824695f8deb5d7aa51255ddcef5d11a2 640 PRINTS PR01047 Threonyl-tRNA synthetase signature 469 497 3.1E-47 T 14-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 GYO_3145 824695f8deb5d7aa51255ddcef5d11a2 640 Gene3D G3DSA:3.10.20.30 1 63 2.0E-26 T 14-10-2018 IPR012675 Beta-grasp domain superfamily GYO_3145 824695f8deb5d7aa51255ddcef5d11a2 640 SUPERFAMILY SSF55186 64 240 3.14E-66 T 14-10-2018 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily GO:0000166 GYO_3145 824695f8deb5d7aa51255ddcef5d11a2 640 Pfam PF02824 TGS domain 2 61 5.7E-14 T 14-10-2018 IPR004095 TGS KEGG: 00970+6.1.1.3 GYO_3145 824695f8deb5d7aa51255ddcef5d11a2 640 Gene3D G3DSA:3.30.980.10 69 221 1.8E-66 T 14-10-2018 GYO_3145 824695f8deb5d7aa51255ddcef5d11a2 640 SMART SM00863 169 218 9.4E-25 T 14-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 GYO_3638 2a24cbb93503c06ada58cbaf99d29345 269 SMART SM00382 28 217 3.3E-15 T 14-10-2018 IPR003593 AAA+ ATPase domain GYO_3638 2a24cbb93503c06ada58cbaf99d29345 269 Pfam PF00005 ABC transporter 20 167 2.0E-31 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 GYO_3638 2a24cbb93503c06ada58cbaf99d29345 269 ProSitePatterns PS00211 ABC transporters family signature. 140 154 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 GYO_3638 2a24cbb93503c06ada58cbaf99d29345 269 SUPERFAMILY SSF52540 4 229 6.78E-60 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase GYO_3638 2a24cbb93503c06ada58cbaf99d29345 269 Gene3D G3DSA:3.40.50.300 4 257 6.0E-67 T 14-10-2018 GYO_0668 157026a6f9589e676de82d0e7642cf1a 412 SUPERFAMILY SSF118215 3 397 3.53E-127 T 14-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 GYO_0668 157026a6f9589e676de82d0e7642cf1a 412 Pfam PF00375 Sodium:dicarboxylate symporter family 3 396 2.2E-136 T 14-10-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 GYO_0668 157026a6f9589e676de82d0e7642cf1a 412 PRINTS PR00173 Glutamate-aspartate symporter signature 188 207 1.4E-56 T 14-10-2018 GYO_0668 157026a6f9589e676de82d0e7642cf1a 412 PRINTS PR00173 Glutamate-aspartate symporter signature 352 372 1.4E-56 T 14-10-2018 GYO_0668 157026a6f9589e676de82d0e7642cf1a 412 PRINTS PR00173 Glutamate-aspartate symporter signature 214 233 1.4E-56 T 14-10-2018 GYO_0668 157026a6f9589e676de82d0e7642cf1a 412 PRINTS PR00173 Glutamate-aspartate symporter signature 290 316 1.4E-56 T 14-10-2018 GYO_0668 157026a6f9589e676de82d0e7642cf1a 412 PRINTS PR00173 Glutamate-aspartate symporter signature 47 67 1.4E-56 T 14-10-2018 GYO_0668 157026a6f9589e676de82d0e7642cf1a 412 PRINTS PR00173 Glutamate-aspartate symporter signature 77 102 1.4E-56 T 14-10-2018 GYO_0668 157026a6f9589e676de82d0e7642cf1a 412 PRINTS PR00173 Glutamate-aspartate symporter signature 325 344 1.4E-56 T 14-10-2018 GYO_0668 157026a6f9589e676de82d0e7642cf1a 412 PRINTS PR00173 Glutamate-aspartate symporter signature 1 21 1.4E-56 T 14-10-2018 GYO_0668 157026a6f9589e676de82d0e7642cf1a 412 Gene3D G3DSA:1.10.3860.10 1 409 3.8E-143 T 14-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 GYO_3126 0b6e8e6d949b3149800c6d8f7d010681 394 Gene3D G3DSA:1.20.1090.10 179 390 1.2E-56 T 14-10-2018 GYO_3126 0b6e8e6d949b3149800c6d8f7d010681 394 Gene3D G3DSA:3.40.50.1970 17 178 4.2E-33 T 14-10-2018 GYO_3126 0b6e8e6d949b3149800c6d8f7d010681 394 Pfam PF13685 Iron-containing alcohol dehydrogenase 30 295 5.5E-70 T 14-10-2018 IPR032837 Glycerol-1-phosphate dehydrogenase KEGG: 00564+1.1.1.261|MetaCyc: PWY-6349 GYO_3126 0b6e8e6d949b3149800c6d8f7d010681 394 SUPERFAMILY SSF56796 25 385 2.36E-55 T 14-10-2018 GYO_3126 0b6e8e6d949b3149800c6d8f7d010681 394 Hamap MF_00497_B Glycerol-1-phosphate dehydrogenase [NAD(P)+] [egsA]. 3 384 56.877 T 14-10-2018 IPR023003 Glycerol-1-phosphate dehydrogenase, bacteria GO:0050492|GO:0055114 KEGG: 00564+1.1.1.261|MetaCyc: PWY-6349 GYO_0812 c07b600da0986c646d830e450c37245e 188 SUPERFAMILY SSF46689 2 68 7.28E-15 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 GYO_0812 c07b600da0986c646d830e450c37245e 188 Gene3D G3DSA:1.10.10.60 1 51 2.5E-14 T 14-10-2018 GYO_0812 c07b600da0986c646d830e450c37245e 188 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 6 19 6.9E-6 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 GYO_0812 c07b600da0986c646d830e450c37245e 188 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 27 50 6.9E-6 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 GYO_0812 c07b600da0986c646d830e450c37245e 188 Pfam PF00440 Bacterial regulatory proteins, tetR family 8 52 1.4E-11 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 GYO_0812 c07b600da0986c646d830e450c37245e 188 Gene3D G3DSA:1.10.357.10 52 185 4.9E-7 T 14-10-2018 GYO_2560 84f6b12cbc78ef107cd872e08273af6b 215 SUPERFAMILY SSF63380 1 89 5.53E-29 T 14-10-2018 IPR017938 Riboflavin synthase-like beta-barrel GYO_2560 84f6b12cbc78ef107cd872e08273af6b 215 Gene3D G3DSA:2.40.30.20 1 88 3.9E-34 T 14-10-2018 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 GYO_2560 84f6b12cbc78ef107cd872e08273af6b 215 Gene3D G3DSA:2.40.30.20 101 204 5.7E-32 T 14-10-2018 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 GYO_2560 84f6b12cbc78ef107cd872e08273af6b 215 Pfam PF00677 Lumazine binding domain 3 86 2.1E-26 T 14-10-2018 IPR026017 Lumazine-binding domain KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 GYO_2560 84f6b12cbc78ef107cd872e08273af6b 215 Pfam PF00677 Lumazine binding domain 99 183 1.9E-21 T 14-10-2018 IPR026017 Lumazine-binding domain KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 GYO_2560 84f6b12cbc78ef107cd872e08273af6b 215 TIGRFAM TIGR00187 ribE: riboflavin synthase, alpha subunit 1 203 1.6E-90 T 14-10-2018 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 GYO_2560 84f6b12cbc78ef107cd872e08273af6b 215 SUPERFAMILY SSF63380 92 196 6.97E-31 T 14-10-2018 IPR017938 Riboflavin synthase-like beta-barrel GYO_2560 84f6b12cbc78ef107cd872e08273af6b 215 PIRSF PIRSF000498 1 210 5.8E-80 T 14-10-2018 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 GYO_1845 096dad7cae5f740b1731a42dbea81cf6 90 Pfam PF09902 Uncharacterized protein conserved in bacteria (DUF2129) 5 74 1.1E-31 T 14-10-2018 IPR016979 Protein of unknown function DUF2129 GYO_1845 096dad7cae5f740b1731a42dbea81cf6 90 Hamap MF_01126 UPF0298 protein . 1 78 22.853 T 14-10-2018 IPR016979 Protein of unknown function DUF2129 GYO_1845 096dad7cae5f740b1731a42dbea81cf6 90 PIRSF PIRSF031653 1 90 2.3E-35 T 14-10-2018 IPR016979 Protein of unknown function DUF2129 GYO_3914 bfd87c8e67801b9cf8c603f4af07ad58 634 Gene3D G3DSA:3.90.550.10 2 197 3.3E-50 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases GYO_3914 bfd87c8e67801b9cf8c603f4af07ad58 634 SUPERFAMILY SSF53448 2 214 3.84E-50 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases GYO_3914 bfd87c8e67801b9cf8c603f4af07ad58 634 Pfam PF00535 Glycosyl transferase family 2 4 133 6.2E-33 T 14-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 GYO_3337 e616e56804999cc6a52788cc9f029900 471 Gene3D G3DSA:3.60.120.10 5 470 3.4E-116 T 14-10-2018 IPR005801 ADC synthase GO:0009058 GYO_3337 e616e56804999cc6a52788cc9f029900 471 Pfam PF00425 chorismate binding enzyme 205 458 1.3E-76 T 14-10-2018 IPR015890 Chorismate-utilising enzyme, C-terminal GYO_3337 e616e56804999cc6a52788cc9f029900 471 SUPERFAMILY SSF56322 38 467 3.66E-104 T 14-10-2018 IPR005801 ADC synthase GO:0009058 GYO_3337 e616e56804999cc6a52788cc9f029900 471 Hamap MF_01935 Isochorismate synthase MenF [menF]. 5 468 31.521 T 14-10-2018 IPR034681 Isochorismate synthase MenF GO:0008909|GO:0009234 KEGG: 00130+5.4.4.2|MetaCyc: PWY-5837|MetaCyc: PWY-5901|MetaCyc: PWY-6406 GYO_3337 e616e56804999cc6a52788cc9f029900 471 TIGRFAM TIGR00543 isochor_syn: isochorismate synthase 117 466 1.6E-110 T 14-10-2018 IPR004561 Isochorismate synthase GO:0008909|GO:0009058 KEGG: 00130+5.4.4.2|MetaCyc: PWY-5837|MetaCyc: PWY-5901|MetaCyc: PWY-6406 GYO_2828 ef488222d8efde864882e23fd11620a0 189 PIRSF PIRSF006019 1 151 3.4E-65 T 14-10-2018 IPR016473 Deoxycytidylate deaminase GO:0004132|GO:0006220|GO:0008270 KEGG: 00240+3.5.4.12|MetaCyc: PWY-7210|Reactome: R-HSA-499943 GYO_2828 ef488222d8efde864882e23fd11620a0 189 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 70 106 - T 14-10-2018 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 GYO_2828 ef488222d8efde864882e23fd11620a0 189 SUPERFAMILY SSF53927 8 140 3.95E-40 T 14-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 GYO_2828 ef488222d8efde864882e23fd11620a0 189 Gene3D G3DSA:3.40.140.10 2 149 2.0E-47 T 14-10-2018 GYO_2828 ef488222d8efde864882e23fd11620a0 189 TIGRFAM TIGR02571 ComEB: ComE operon protein 2 2 150 6.0E-83 T 14-10-2018 IPR013404 Competence operon E, ComEB GYO_2828 ef488222d8efde864882e23fd11620a0 189 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 5 116 3.0E-28 T 14-10-2018 IPR002125 Cytidine and deoxycytidylate deaminase domain GYO_4178 cc3b0c1e6a725e8421f7edaa562a0445 256 SUPERFAMILY SSF53448 2 235 1.59E-44 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases GYO_4178 cc3b0c1e6a725e8421f7edaa562a0445 256 Gene3D G3DSA:3.90.550.10 2 256 1.1E-104 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases GYO_4178 cc3b0c1e6a725e8421f7edaa562a0445 256 Pfam PF00535 Glycosyl transferase family 2 5 167 5.1E-26 T 14-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 GYO_3347 fb2338843991e53b43548ce433b0fc2e 353 TIGRFAM TIGR02906 spore_CotS: spore coat protein, CotS family 44 352 3.2E-108 T 14-10-2018 IPR014255 Spore coat protein CotS GYO_3347 fb2338843991e53b43548ce433b0fc2e 353 SUPERFAMILY SSF56112 28 337 1.2E-43 T 14-10-2018 IPR011009 Protein kinase-like domain superfamily GYO_3347 fb2338843991e53b43548ce433b0fc2e 353 Gene3D G3DSA:3.90.1200.10 121 353 8.1E-86 T 14-10-2018 GYO_3347 fb2338843991e53b43548ce433b0fc2e 353 Gene3D G3DSA:3.30.200.20 8 120 2.3E-37 T 14-10-2018 GYO_3347 fb2338843991e53b43548ce433b0fc2e 353 Pfam PF01636 Phosphotransferase enzyme family 46 293 1.3E-14 T 14-10-2018 IPR002575 Aminoglycoside phosphotransferase GYO_1353 175ac43aacde5ba420d925675ed3452f 522 Gene3D G3DSA:3.30.70.2450 202 286 1.9E-109 T 14-10-2018 GYO_1353 175ac43aacde5ba420d925675ed3452f 522 Gene3D G3DSA:3.40.30.120 406 520 8.1E-18 T 14-10-2018 GYO_1353 175ac43aacde5ba420d925675ed3452f 522 Gene3D G3DSA:3.50.50.60 31 360 1.9E-109 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily GYO_1353 175ac43aacde5ba420d925675ed3452f 522 SUPERFAMILY SSF51905 28 373 8.4E-59 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily GYO_1353 175ac43aacde5ba420d925675ed3452f 522 Pfam PF01494 FAD binding domain 28 362 7.7E-98 T 14-10-2018 IPR002938 FAD-binding domain GO:0071949 GYO_1353 175ac43aacde5ba420d925675ed3452f 522 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 297 312 1.9E-40 T 14-10-2018 GYO_1353 175ac43aacde5ba420d925675ed3452f 522 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 330 348 1.9E-40 T 14-10-2018 GYO_1353 175ac43aacde5ba420d925675ed3452f 522 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 348 364 1.9E-40 T 14-10-2018 GYO_1353 175ac43aacde5ba420d925675ed3452f 522 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 29 51 1.9E-40 T 14-10-2018 GYO_1353 175ac43aacde5ba420d925675ed3452f 522 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 173 188 1.9E-40 T 14-10-2018 GYO_1353 175ac43aacde5ba420d925675ed3452f 522 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 312 328 1.9E-40 T 14-10-2018 GYO_4209 257d12dd71a53208f7dfc23492586e20 318 TIGRFAM TIGR01432 QOXA: cytochrome aa3 quinol oxidase, subunit II 11 239 3.3E-135 T 14-10-2018 IPR006332 Quinol oxidase subunit II GO:0009486|GO:0016021|GO:0016682|GO:0055114 GYO_4209 257d12dd71a53208f7dfc23492586e20 318 Pfam PF02790 Cytochrome C oxidase subunit II, transmembrane domain 34 109 1.7E-10 T 14-10-2018 IPR011759 Cytochrome C oxidase subunit II, transmembrane domain GO:0016021|GO:0022900 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 GYO_4209 257d12dd71a53208f7dfc23492586e20 318 PIRSF PIRSF000292 2 310 3.2E-111 T 14-10-2018 IPR006333 Cytochrome o ubiquinol oxidase subunit II GO:0016020|GO:0016682|GO:0055114 GYO_4209 257d12dd71a53208f7dfc23492586e20 318 Gene3D G3DSA:2.60.40.420 114 311 1.8E-40 T 14-10-2018 IPR008972 Cupredoxin GYO_4209 257d12dd71a53208f7dfc23492586e20 318 Gene3D G3DSA:1.10.287.90 26 113 2.6E-30 T 14-10-2018 IPR036257 Cytochrome C oxidase subunit II, transmembrane domain superfamily Reactome: R-HSA-5628897|Reactome: R-HSA-611105 GYO_4209 257d12dd71a53208f7dfc23492586e20 318 SUPERFAMILY SSF81464 17 117 1.28E-24 T 14-10-2018 IPR036257 Cytochrome C oxidase subunit II, transmembrane domain superfamily Reactome: R-HSA-5628897|Reactome: R-HSA-611105 GYO_4209 257d12dd71a53208f7dfc23492586e20 318 SUPERFAMILY SSF49503 124 276 1.05E-40 T 14-10-2018 IPR008972 Cupredoxin GYO_0712 941b39c03010afd8e2ec8914b8f99a8b 73 Pfam PF14567 SMI1-KNR4 cell-wall 9 71 1.4E-12 T 14-10-2018 GYO_0712 941b39c03010afd8e2ec8914b8f99a8b 73 Gene3D G3DSA:3.40.1580.10 1 73 1.4E-14 T 14-10-2018 IPR037883 Knr4/Smi1-like domain superfamily GYO_0712 941b39c03010afd8e2ec8914b8f99a8b 73 SUPERFAMILY SSF160631 2 73 3.53E-13 T 14-10-2018 GYO_4447 51a3c1250bc542044bc898bb9450b547 299 Gene3D G3DSA:3.10.450.40 237 299 2.6E-12 T 14-10-2018 GYO_4447 51a3c1250bc542044bc898bb9450b547 299 Gene3D G3DSA:3.10.450.40 173 236 3.4E-10 T 14-10-2018 GYO_4447 51a3c1250bc542044bc898bb9450b547 299 Gene3D G3DSA:3.10.450.40 106 172 3.8E-10 T 14-10-2018 GYO_4447 51a3c1250bc542044bc898bb9450b547 299 Gene3D G3DSA:3.10.450.40 36 105 5.6E-8 T 14-10-2018 GYO_4447 51a3c1250bc542044bc898bb9450b547 299 Pfam PF03413 Peptidase propeptide and YPEB domain 46 103 5.6E-4 T 14-10-2018 IPR025711 PepSY domain GYO_4447 51a3c1250bc542044bc898bb9450b547 299 Pfam PF03413 Peptidase propeptide and YPEB domain 177 235 8.3E-7 T 14-10-2018 IPR025711 PepSY domain GYO_4447 51a3c1250bc542044bc898bb9450b547 299 Pfam PF03413 Peptidase propeptide and YPEB domain 112 169 1.4E-5 T 14-10-2018 IPR025711 PepSY domain GYO_4447 51a3c1250bc542044bc898bb9450b547 299 Pfam PF03413 Peptidase propeptide and YPEB domain 243 297 4.9E-6 T 14-10-2018 IPR025711 PepSY domain GYO_3056 681d898ba9351697b6f41395cb13d4e1 430 TIGRFAM TIGR00713 hemL: glutamate-1-semialdehyde-2,1-aminomutase 6 426 5.1E-206 T 14-10-2018 IPR004639 Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase GO:0033014|GO:0042286 KEGG: 00860+5.4.3.8|MetaCyc: PWY-5188 GYO_3056 681d898ba9351697b6f41395cb13d4e1 430 SUPERFAMILY SSF53383 4 426 4.19E-132 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase GYO_3056 681d898ba9351697b6f41395cb13d4e1 430 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 237 273 - T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 GYO_3056 681d898ba9351697b6f41395cb13d4e1 430 Gene3D G3DSA:3.40.640.10 72 319 3.6E-187 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 GYO_3056 681d898ba9351697b6f41395cb13d4e1 430 Pfam PF00202 Aminotransferase class-III 34 395 1.3E-74 T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 GYO_3056 681d898ba9351697b6f41395cb13d4e1 430 Hamap MF_00375 Glutamate-1-semialdehyde 2,1-aminomutase [hemL]. 6 427 105.42 T 14-10-2018 IPR004639 Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase GO:0033014|GO:0042286 KEGG: 00860+5.4.3.8|MetaCyc: PWY-5188 GYO_3056 681d898ba9351697b6f41395cb13d4e1 430 Gene3D G3DSA:3.90.1150.10 10 421 3.6E-187 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 GYO_0630 5f127129a4302f2658893948d7f57592 81 Pfam PF13129 Protein of unknown function (DUF3953) 34 73 2.5E-16 T 14-10-2018 IPR025018 Protein of unknown function DUF3953 GYO_4270 b8e474f053a4e4d38d0322a2730ac7e7 106 Pfam PF17280 Family of unknown function (DUF5345) 10 86 3.5E-23 T 14-10-2018 IPR035238 Protein of unknown function DUF5345 GYO_4270 b8e474f053a4e4d38d0322a2730ac7e7 106 ProDom PD070249 YXLC MEMBRANE TRANSMEMBRANE 9 102 2.0E-41 T 14-10-2018 IPR035238 Protein of unknown function DUF5345 GYO_3024 06a04b6b2d99ab94394656a9b5d35c59 386 SUPERFAMILY SSF54106 2 48 1.31E-9 T 14-10-2018 GYO_3024 06a04b6b2d99ab94394656a9b5d35c59 386 Pfam PF01476 LysM domain 4 48 6.2E-11 T 14-10-2018 IPR018392 LysM domain GYO_3024 06a04b6b2d99ab94394656a9b5d35c59 386 TIGRFAM TIGR02899 spore_safA: spore coat assembly protein SafA 6 49 1.7E-22 T 14-10-2018 IPR014248 Spore coat assembly protein SafA GYO_3024 06a04b6b2d99ab94394656a9b5d35c59 386 Gene3D G3DSA:3.10.350.10 2 59 4.0E-13 T 14-10-2018 IPR036779 LysM domain superfamily GYO_3024 06a04b6b2d99ab94394656a9b5d35c59 386 SMART SM00257 3 48 5.8E-13 T 14-10-2018 IPR018392 LysM domain GYO_4126 4a8fdc3ddf6612ae69424761b712d112 381 SUPERFAMILY SSF48452 105 307 1.16E-21 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 GYO_4126 4a8fdc3ddf6612ae69424761b712d112 381 Pfam PF12895 Anaphase-promoting complex, cyclosome, subunit 3 133 207 1.1E-6 T 14-10-2018 GYO_4126 4a8fdc3ddf6612ae69424761b712d112 381 SMART SM00028 222 255 1.2E-4 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 GYO_4126 4a8fdc3ddf6612ae69424761b712d112 381 SMART SM00028 262 295 1.4 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 GYO_4126 4a8fdc3ddf6612ae69424761b712d112 381 SMART SM00028 182 215 20.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 GYO_4126 4a8fdc3ddf6612ae69424761b712d112 381 SMART SM00028 141 174 150.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 GYO_4126 4a8fdc3ddf6612ae69424761b712d112 381 Gene3D G3DSA:1.25.40.10 1 381 9.4E-158 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 GYO_4126 4a8fdc3ddf6612ae69424761b712d112 381 Pfam PF13424 Tetratricopeptide repeat 223 290 1.2E-8 T 14-10-2018 GYO_4000 f69dc23328ce17d0393e1e68b006c13f 1026 SUPERFAMILY SSF55874 485 654 1.01E-45 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily GYO_4000 f69dc23328ce17d0393e1e68b006c13f 1026 SUPERFAMILY SSF47384 417 496 1.33E-14 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 GYO_4000 f69dc23328ce17d0393e1e68b006c13f 1026 Gene3D G3DSA:3.30.565.10 498 655 1.1E-46 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily GYO_4000 f69dc23328ce17d0393e1e68b006c13f 1026 SMART SM00388 428 496 1.7E-13 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 GYO_4000 f69dc23328ce17d0393e1e68b006c13f 1026 Pfam PF06580 Histidine kinase 817 897 3.4E-22 T 14-10-2018 IPR010559 Signal transduction histidine kinase, internal region GO:0000155|GO:0000160|GO:0016021 GYO_4000 f69dc23328ce17d0393e1e68b006c13f 1026 SUPERFAMILY SSF49785 50 189 1.3E-9 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily GYO_4000 f69dc23328ce17d0393e1e68b006c13f 1026 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 543 649 8.1E-30 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase GYO_4000 f69dc23328ce17d0393e1e68b006c13f 1026 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 915 1011 1.2E-7 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase GYO_4000 f69dc23328ce17d0393e1e68b006c13f 1026 SMART SM00448 688 801 1.8E-33 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 GYO_4000 f69dc23328ce17d0393e1e68b006c13f 1026 Gene3D G3DSA:1.10.287.130 413 497 3.5E-19 T 14-10-2018 GYO_4000 f69dc23328ce17d0393e1e68b006c13f 1026 PRINTS PR00344 Bacterial sensor protein C-terminal signature 635 648 2.1E-16 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 GYO_4000 f69dc23328ce17d0393e1e68b006c13f 1026 PRINTS PR00344 Bacterial sensor protein C-terminal signature 597 607 2.1E-16 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 GYO_4000 f69dc23328ce17d0393e1e68b006c13f 1026 PRINTS PR00344 Bacterial sensor protein C-terminal signature 611 629 2.1E-16 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 GYO_4000 f69dc23328ce17d0393e1e68b006c13f 1026 PRINTS PR00344 Bacterial sensor protein C-terminal signature 579 593 2.1E-16 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 GYO_4000 f69dc23328ce17d0393e1e68b006c13f 1026 Pfam PF00512 His Kinase A (phospho-acceptor) domain 429 496 3.7E-12 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 GYO_4000 f69dc23328ce17d0393e1e68b006c13f 1026 Gene3D G3DSA:3.30.565.10 877 1015 3.1E-15 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily GYO_4000 f69dc23328ce17d0393e1e68b006c13f 1026 SMART SM00387 907 1014 6.9E-7 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase GYO_4000 f69dc23328ce17d0393e1e68b006c13f 1026 SMART SM00387 542 651 3.1E-37 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase GYO_4000 f69dc23328ce17d0393e1e68b006c13f 1026 SUPERFAMILY SSF52172 684 814 3.42E-36 T 14-10-2018 IPR011006 CheY-like superfamily GYO_4000 f69dc23328ce17d0393e1e68b006c13f 1026 Pfam PF00072 Response regulator receiver domain 690 801 3.9E-24 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 GYO_4000 f69dc23328ce17d0393e1e68b006c13f 1026 Gene3D G3DSA:3.40.50.12740 687 859 4.0E-38 T 14-10-2018 GYO_4000 f69dc23328ce17d0393e1e68b006c13f 1026 SUPERFAMILY SSF55874 881 1010 1.57E-12 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily GYO_4000 f69dc23328ce17d0393e1e68b006c13f 1026 Pfam PF07695 7TM diverse intracellular signalling 207 404 5.3E-9 T 14-10-2018 IPR011623 7TM-DISM receptor, extracellular domain, type 1 GYO_0633 5561d9ec1d3ab19fbc0f0eaef36a10d0 300 PRINTS PR00069 Aldo-keto reductase signature 112 130 1.4E-6 T 14-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 GYO_0633 5561d9ec1d3ab19fbc0f0eaef36a10d0 300 PRINTS PR00069 Aldo-keto reductase signature 143 160 1.4E-6 T 14-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 GYO_0633 5561d9ec1d3ab19fbc0f0eaef36a10d0 300 SUPERFAMILY SSF51430 3 297 1.83E-72 T 14-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily GYO_0633 5561d9ec1d3ab19fbc0f0eaef36a10d0 300 Pfam PF00248 Aldo/keto reductase family 15 290 2.6E-58 T 14-10-2018 IPR023210 NADP-dependent oxidoreductase domain GYO_0633 5561d9ec1d3ab19fbc0f0eaef36a10d0 300 Gene3D G3DSA:3.20.20.100 2 300 1.6E-98 T 14-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily GYO_3438 2d83228ea0a4f460efee515cc62cb839 622 Pfam PF00912 Transglycosylase 61 237 2.1E-60 T 14-10-2018 IPR001264 Glycosyl transferase, family 51 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 GYO_3438 2d83228ea0a4f460efee515cc62cb839 622 SUPERFAMILY SSF56601 219 622 1.93E-91 T 14-10-2018 IPR012338 Beta-lactamase/transpeptidase-like GYO_3438 2d83228ea0a4f460efee515cc62cb839 622 SUPERFAMILY SSF53955 52 262 6.19E-70 T 14-10-2018 IPR023346 Lysozyme-like domain superfamily GYO_3438 2d83228ea0a4f460efee515cc62cb839 622 Gene3D G3DSA:1.10.3810.10 54 254 2.4E-69 T 14-10-2018 IPR036950 Penicillin binding protein transglycosylase domain KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 GYO_3438 2d83228ea0a4f460efee515cc62cb839 622 Gene3D G3DSA:3.40.710.10 290 616 1.5E-91 T 14-10-2018 GYO_3438 2d83228ea0a4f460efee515cc62cb839 622 Pfam PF00905 Penicillin binding protein transpeptidase domain 348 586 8.0E-21 T 14-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 GYO_0037 e23603f94273bdd2cd273b04f5cf12d5 212 ProSitePatterns PS01331 Thymidylate kinase signature. 93 105 - T 14-10-2018 IPR018095 Thymidylate kinase, conserved site GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210|Reactome: R-HSA-499943 GYO_0037 e23603f94273bdd2cd273b04f5cf12d5 212 TIGRFAM TIGR00041 DTMP_kinase: dTMP kinase 2 199 6.6E-69 T 14-10-2018 IPR018094 Thymidylate kinase GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210|Reactome: R-HSA-499943 GYO_0037 e23603f94273bdd2cd273b04f5cf12d5 212 Hamap MF_00165 Thymidylate kinase [tmk]. 4 207 31.285 T 14-10-2018 IPR018094 Thymidylate kinase GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210|Reactome: R-HSA-499943 GYO_0037 e23603f94273bdd2cd273b04f5cf12d5 212 SUPERFAMILY SSF52540 1 210 1.8E-58 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase GYO_0037 e23603f94273bdd2cd273b04f5cf12d5 212 Pfam PF02223 Thymidylate kinase 8 199 1.1E-59 T 14-10-2018 IPR039430 Thymidylate kinase-like domain KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210 GYO_0037 e23603f94273bdd2cd273b04f5cf12d5 212 Gene3D G3DSA:3.40.50.300 1 211 1.6E-68 T 14-10-2018 GYO_4520 8a253fe9f5406cc329fd76f606b07450 142 SUPERFAMILY SSF54211 27 137 5.06E-35 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold GYO_4520 8a253fe9f5406cc329fd76f606b07450 142 Gene3D G3DSA:3.30.230.10 24 142 4.8E-45 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup GYO_4520 8a253fe9f5406cc329fd76f606b07450 142 TIGRFAM TIGR00188 rnpA: ribonuclease P protein component 27 136 2.4E-39 T 14-10-2018 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 GYO_4520 8a253fe9f5406cc329fd76f606b07450 142 ProDom PD003629 P RIBONUCLEASE COMPONENT HYDROLASE RNASE C5 RNASEP RNA-BINDING PROCESSING ENDONUCLEASE 33 126 2.0E-48 T 14-10-2018 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 GYO_4520 8a253fe9f5406cc329fd76f606b07450 142 Hamap MF_00227 Ribonuclease P protein component [rnpA]. 27 136 20.545 T 14-10-2018 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 GYO_4520 8a253fe9f5406cc329fd76f606b07450 142 Pfam PF00825 Ribonuclease P 27 132 4.3E-35 T 14-10-2018 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 GYO_4520 8a253fe9f5406cc329fd76f606b07450 142 ProSitePatterns PS00648 Bacterial ribonuclease P protein component signature. 77 91 - T 14-10-2018 IPR020539 Ribonuclease P, conserved site GO:0004526 GYO_3868 c890aa55aa5a99639c28c338c7cb3870 281 PIRSF PIRSF006483 1 281 3.8E-82 T 14-10-2018 IPR003740 Uncharacterised membrane protein YitT GYO_3868 c890aa55aa5a99639c28c338c7cb3870 281 Pfam PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 13 215 2.2E-61 T 14-10-2018 IPR003740 Uncharacterised membrane protein YitT GYO_3868 c890aa55aa5a99639c28c338c7cb3870 281 Gene3D G3DSA:3.30.70.120 192 268 3.7E-25 T 14-10-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal GYO_3868 c890aa55aa5a99639c28c338c7cb3870 281 Pfam PF10035 Uncharacterized protein conserved in bacteria (DUF2179) 221 275 8.2E-21 T 14-10-2018 IPR019264 Domain of unknown function DUF2179 GYO_3690 035785c6b9a2e6e33e585278adebfecf 251 TIGRFAM TIGR03732 lanti_perm_MutE: lantibiotic protection ABC transporter permease subunit, MutE/EpiE family 3 238 2.6E-91 T 14-10-2018 IPR021205 Lantibiotic ABC transporter permease subunit, SpaE/MutE GYO_3690 035785c6b9a2e6e33e585278adebfecf 251 Pfam PF12730 ABC-2 family transporter protein 5 167 8.0E-8 T 14-10-2018 IPR032688 ABC-2 family transporter protein GO:0055085 GYO_3574 66a1bf0ee7233f6685d9d3555e8dfd21 274 Pfam PF03180 NLPA lipoprotein 33 272 1.5E-87 T 14-10-2018 IPR004872 Lipoprotein NlpA family GYO_3574 66a1bf0ee7233f6685d9d3555e8dfd21 274 SUPERFAMILY SSF53850 32 272 1.47E-76 T 14-10-2018 GYO_3574 66a1bf0ee7233f6685d9d3555e8dfd21 274 PIRSF PIRSF002854 1 273 1.9E-92 T 14-10-2018 IPR004872 Lipoprotein NlpA family GYO_3574 66a1bf0ee7233f6685d9d3555e8dfd21 274 Gene3D G3DSA:3.40.190.10 115 222 2.5E-98 T 14-10-2018 GYO_3574 66a1bf0ee7233f6685d9d3555e8dfd21 274 Gene3D G3DSA:3.40.190.10 35 271 2.5E-98 T 14-10-2018 GYO_3313 8d5d1c9ce7f2ce95167cd14506d1e709 270 SUPERFAMILY SSF161098 71 253 3.53E-31 T 14-10-2018 IPR035906 MetI-like superfamily GYO_3313 8d5d1c9ce7f2ce95167cd14506d1e709 270 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 90 264 5.0E-26 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 GYO_3313 8d5d1c9ce7f2ce95167cd14506d1e709 270 Gene3D G3DSA:1.10.3720.10 72 267 3.8E-24 T 14-10-2018 IPR035906 MetI-like superfamily GYO_4496 c5e2a3b3e507109cbc8d346f7bab81e5 689 SUPERFAMILY SSF48208 189 543 4.97E-86 T 14-10-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 GYO_4496 c5e2a3b3e507109cbc8d346f7bab81e5 689 Pfam PF03190 Protein of unknown function, DUF255 8 169 4.9E-78 T 14-10-2018 IPR004879 Domain of unknown function DUF255 GYO_4496 c5e2a3b3e507109cbc8d346f7bab81e5 689 Gene3D G3DSA:1.50.10.10 406 610 1.7E-10 T 14-10-2018 IPR012341 Six-hairpin glycosidase-like superfamily GO:0003824 GYO_4496 c5e2a3b3e507109cbc8d346f7bab81e5 689 Gene3D G3DSA:1.50.10.10 211 383 6.2E-6 T 14-10-2018 IPR012341 Six-hairpin glycosidase-like superfamily GO:0003824 GYO_4496 c5e2a3b3e507109cbc8d346f7bab81e5 689 PIRSF PIRSF006402 1 689 3.5E-252 T 14-10-2018 IPR024705 Spermatogenesis-associated protein 20 GYO_4496 c5e2a3b3e507109cbc8d346f7bab81e5 689 Pfam PF07221 N-acylglucosamine 2-epimerase (GlcNAc 2-epimerase) 223 324 0.08 T 14-10-2018 GYO_4496 c5e2a3b3e507109cbc8d346f7bab81e5 689 SUPERFAMILY SSF52833 5 134 5.61E-36 T 14-10-2018 IPR036249 Thioredoxin-like superfamily GYO_4496 c5e2a3b3e507109cbc8d346f7bab81e5 689 Gene3D G3DSA:3.40.30.10 5 176 5.3E-74 T 14-10-2018 GYO_3741 cf4933fcaee60b89f78c5f1c32dbadbe 300 ProSitePatterns PS00211 ABC transporters family signature. 130 144 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 GYO_3741 cf4933fcaee60b89f78c5f1c32dbadbe 300 Pfam PF00005 ABC transporter 20 157 7.6E-31 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 GYO_3741 cf4933fcaee60b89f78c5f1c32dbadbe 300 SMART SM00382 29 213 4.5E-15 T 14-10-2018 IPR003593 AAA+ ATPase domain GYO_3741 cf4933fcaee60b89f78c5f1c32dbadbe 300 SUPERFAMILY SSF52540 4 223 3.71E-56 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase GYO_3741 cf4933fcaee60b89f78c5f1c32dbadbe 300 Gene3D G3DSA:3.40.50.300 1 238 1.2E-59 T 14-10-2018 GYO_1638 39cc8c1a306a37bc368e39cf07eb732b 208 ProSitePatterns PS00175 Phosphoglycerate mutase family phosphohistidine signature. 6 15 - T 14-10-2018 IPR001345 Phosphoglycerate/bisphosphoglycerate mutase, active site GO:0003824 GYO_1638 39cc8c1a306a37bc368e39cf07eb732b 208 SUPERFAMILY SSF53254 1 190 1.02E-52 T 14-10-2018 IPR029033 Histidine phosphatase superfamily GYO_1638 39cc8c1a306a37bc368e39cf07eb732b 208 SMART SM00855 3 157 7.4E-19 T 14-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 GYO_1638 39cc8c1a306a37bc368e39cf07eb732b 208 PIRSF PIRSF000709 2 175 3.2E-16 T 14-10-2018 GYO_1638 39cc8c1a306a37bc368e39cf07eb732b 208 Gene3D G3DSA:3.40.50.1240 2 206 8.2E-60 T 14-10-2018 IPR029033 Histidine phosphatase superfamily GYO_1638 39cc8c1a306a37bc368e39cf07eb732b 208 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 4 191 9.7E-53 T 14-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 GYO_2817 7106049473d2b7959f95edfcc6611c9f 343 Pfam PF01628 HrcA protein C terminal domain 104 323 9.5E-65 T 14-10-2018 IPR021153 Heat-inducible transcription repressor HrcA, C-terminal GO:0003677|GO:0006355 GYO_2817 7106049473d2b7959f95edfcc6611c9f 343 Gene3D G3DSA:1.10.10.10 1 85 2.9E-33 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily GYO_2817 7106049473d2b7959f95edfcc6611c9f 343 Gene3D G3DSA:3.30.390.60 128 230 7.3E-60 T 14-10-2018 IPR023120 Winged helix-turn-helix transcription repressor, HrcA, inserted dimerising domain superfamily GYO_2817 7106049473d2b7959f95edfcc6611c9f 343 SUPERFAMILY SSF55781 71 340 5.89E-71 T 14-10-2018 GYO_2817 7106049473d2b7959f95edfcc6611c9f 343 Hamap MF_00081 Heat-inducible transcription repressor HrcA [hrcA]. 1 330 34.028 T 14-10-2018 IPR002571 Heat-inducible transcription repressor HrcA GO:0003677|GO:0006355 GYO_2817 7106049473d2b7959f95edfcc6611c9f 343 SUPERFAMILY SSF46785 1 84 6.44E-23 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily GYO_2817 7106049473d2b7959f95edfcc6611c9f 343 Gene3D G3DSA:3.30.450.40 104 336 7.3E-60 T 14-10-2018 IPR029016 GAF-like domain superfamily GYO_2817 7106049473d2b7959f95edfcc6611c9f 343 TIGRFAM TIGR00331 hrcA: heat-inducible transcription repressor HrcA 3 336 5.0E-121 T 14-10-2018 IPR002571 Heat-inducible transcription repressor HrcA GO:0003677|GO:0006355 GYO_2817 7106049473d2b7959f95edfcc6611c9f 343 PIRSF PIRSF005485 1 341 9.6E-129 T 14-10-2018 IPR002571 Heat-inducible transcription repressor HrcA GO:0003677|GO:0006355 GYO_0489 813ede91ddf937389a5b8697da1a1366 231 SMART SM00382 28 215 3.9E-11 T 14-10-2018 IPR003593 AAA+ ATPase domain GYO_0489 813ede91ddf937389a5b8697da1a1366 231 Gene3D G3DSA:3.40.50.300 1 220 2.8E-60 T 14-10-2018 GYO_0489 813ede91ddf937389a5b8697da1a1366 231 SUPERFAMILY SSF52540 4 215 1.31E-54 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase GYO_0489 813ede91ddf937389a5b8697da1a1366 231 ProSitePatterns PS00211 ABC transporters family signature. 138 152 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 GYO_0489 813ede91ddf937389a5b8697da1a1366 231 Pfam PF00005 ABC transporter 19 165 3.9E-31 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 GYO_0083 c7a853234d9c1449fe5bf34d6c4753cc 258 SUPERFAMILY SSF53067 2 122 1.34E-40 T 14-10-2018 GYO_0083 c7a853234d9c1449fe5bf34d6c4753cc 258 Gene3D G3DSA:3.30.420.40 1 88 6.2E-34 T 14-10-2018 GYO_0083 c7a853234d9c1449fe5bf34d6c4753cc 258 Pfam PF03309 Type III pantothenate kinase 2 206 1.2E-76 T 14-10-2018 IPR004619 Type III pantothenate kinase GO:0004594 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961 GYO_0083 c7a853234d9c1449fe5bf34d6c4753cc 258 Gene3D G3DSA:3.30.420.40 89 256 4.4E-65 T 14-10-2018 GYO_0083 c7a853234d9c1449fe5bf34d6c4753cc 258 TIGRFAM TIGR00671 baf: pantothenate kinase, type III 2 249 5.7E-97 T 14-10-2018 IPR004619 Type III pantothenate kinase GO:0004594 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961 GYO_0083 c7a853234d9c1449fe5bf34d6c4753cc 258 Hamap MF_01274 Type III pantothenate kinase [coaX]. 1 254 38.261 T 14-10-2018 IPR004619 Type III pantothenate kinase GO:0004594 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961 GYO_0083 c7a853234d9c1449fe5bf34d6c4753cc 258 SUPERFAMILY SSF53067 123 253 6.88E-42 T 14-10-2018 GYO_2067 b505d0f5b4db517774facd954578f61a 760 Gene3D G3DSA:3.30.70.250 120 188 1.5E-101 T 14-10-2018 GYO_2067 b505d0f5b4db517774facd954578f61a 760 Pfam PF03060 Nitronate monooxygenase 323 592 3.6E-7 T 14-10-2018 IPR004136 Nitronate monooxygenase GO:0018580|GO:0055114 KEGG: 00910+1.13.12.16|MetaCyc: PWY-723 GYO_2067 b505d0f5b4db517774facd954578f61a 760 Pfam PF00698 Acyl transferase domain 3 276 1.3E-30 T 14-10-2018 IPR014043 Acyl transferase GYO_2067 b505d0f5b4db517774facd954578f61a 760 SMART SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. 5 295 1.9E-31 T 14-10-2018 IPR020801 Polyketide synthase, acyl transferase domain GYO_2067 b505d0f5b4db517774facd954578f61a 760 SUPERFAMILY SSF51395 173 579 3.85E-24 T 14-10-2018 GYO_2067 b505d0f5b4db517774facd954578f61a 760 SUPERFAMILY SSF52151 1 286 1.46E-60 T 14-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GYO_2067 b505d0f5b4db517774facd954578f61a 760 TIGRFAM TIGR02814 pfaD_fam: PfaD family protein 312 751 1.3E-222 T 14-10-2018 IPR014179 PfaD family protein KEGG: 00061+2.3.1.39|MetaCyc: PWY-4381|MetaCyc: PWY-6799|MetaCyc: PWY-7388 GYO_2067 b505d0f5b4db517774facd954578f61a 760 Gene3D G3DSA:3.20.20.70 320 668 3.2E-50 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 GYO_2067 b505d0f5b4db517774facd954578f61a 760 TIGRFAM TIGR00128 fabD: malonyl CoA-acyl carrier protein transacylase 1 282 4.6E-128 T 14-10-2018 IPR004410 Malonyl CoA-acyl carrier protein transacylase, FabD-type GO:0004314 KEGG: 00061+2.3.1.39|MetaCyc: PWY-4381|MetaCyc: PWY-6799|MetaCyc: PWY-7388 GYO_2067 b505d0f5b4db517774facd954578f61a 760 Gene3D G3DSA:3.40.366.10 4 275 1.5E-101 T 14-10-2018 IPR001227 Acyl transferase domain superfamily GO:0016740 GYO_2067 b505d0f5b4db517774facd954578f61a 760 SUPERFAMILY SSF55048 121 177 1.7E-12 T 14-10-2018 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding GYO_2988 a8a108d9da1791b4bbfcecc68e692261 216 SUPERFAMILY SSF81901 3 210 2.51E-39 T 14-10-2018 GYO_2988 a8a108d9da1791b4bbfcecc68e692261 216 Pfam PF14559 Tetratricopeptide repeat 10 67 3.0E-7 T 14-10-2018 GYO_2988 a8a108d9da1791b4bbfcecc68e692261 216 Gene3D G3DSA:1.25.40.10 23 215 1.2E-58 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 GYO_2988 a8a108d9da1791b4bbfcecc68e692261 216 Pfam PF12895 Anaphase-promoting complex, cyclosome, subunit 3 81 161 4.5E-7 T 14-10-2018 GYO_2988 a8a108d9da1791b4bbfcecc68e692261 216 SMART SM00028 1 33 0.18 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 GYO_2988 a8a108d9da1791b4bbfcecc68e692261 216 SMART SM00028 102 135 0.0033 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 GYO_2988 a8a108d9da1791b4bbfcecc68e692261 216 SMART SM00028 170 203 1.2E-5 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 GYO_2988 a8a108d9da1791b4bbfcecc68e692261 216 SMART SM00028 34 67 0.017 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 GYO_2988 a8a108d9da1791b4bbfcecc68e692261 216 SMART SM00028 68 101 0.15 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 GYO_2988 a8a108d9da1791b4bbfcecc68e692261 216 SMART SM00028 136 169 0.12 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 GYO_2988 a8a108d9da1791b4bbfcecc68e692261 216 Pfam PF07719 Tetratricopeptide repeat 170 203 1.5E-5 T 14-10-2018 IPR013105 Tetratricopeptide repeat 2 GYO_0479 7852f058668634cf03c5a6bae3771008 354 Pfam PF17118 Domain of unknown function (DUF5105) 164 352 2.2E-69 T 14-10-2018 IPR031343 Domain of unknown function DUF5105 GYO_0479 7852f058668634cf03c5a6bae3771008 354 Pfam PF11611 Domain of unknown function (DUF4352) 38 148 1.0E-25 T 14-10-2018 IPR029051 Domain of unknown function DUF4352 GYO_0479 7852f058668634cf03c5a6bae3771008 354 Gene3D G3DSA:2.60.40.1240 35 166 7.5E-20 T 14-10-2018 IPR029050 Immunoprotective extracellular, immunoglobulin-like domain superfamily GYO_3129 88c36e423b5510e9ab94a9e623d5abf4 561 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 288 486 1.1E-41 T 14-10-2018 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 GYO_3129 88c36e423b5510e9ab94a9e623d5abf4 561 SUPERFAMILY SSF53067 3 280 2.45E-39 T 14-10-2018 GYO_3129 88c36e423b5510e9ab94a9e623d5abf4 561 PIRSF PIRSF000538 1 540 1.8E-66 T 14-10-2018 IPR000577 Carbohydrate kinase, FGGY GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 GYO_3129 88c36e423b5510e9ab94a9e623d5abf4 561 Hamap MF_00520 Ribulokinase [araB]. 1 546 52.311 T 14-10-2018 IPR005929 Ribulokinase GO:0005524|GO:0008741|GO:0019569 KEGG: 00040+2.7.1.16 GYO_3129 88c36e423b5510e9ab94a9e623d5abf4 561 ProSitePatterns PS00445 FGGY family of carbohydrate kinases signature 2. 397 417 - T 14-10-2018 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 GYO_3129 88c36e423b5510e9ab94a9e623d5abf4 561 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 3 274 1.3E-15 T 14-10-2018 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 GYO_3129 88c36e423b5510e9ab94a9e623d5abf4 561 Gene3D G3DSA:3.30.420.40 2 279 1.2E-71 T 14-10-2018 GYO_3129 88c36e423b5510e9ab94a9e623d5abf4 561 SUPERFAMILY SSF53067 280 537 1.04E-57 T 14-10-2018 GYO_3129 88c36e423b5510e9ab94a9e623d5abf4 561 Gene3D G3DSA:3.30.420.40 280 549 1.8E-83 T 14-10-2018 GYO_3129 88c36e423b5510e9ab94a9e623d5abf4 561 TIGRFAM TIGR01234 L-ribulokinase: ribulokinase 2 541 1.4E-292 T 14-10-2018 IPR005929 Ribulokinase GO:0005524|GO:0008741|GO:0019569 KEGG: 00040+2.7.1.16 GYO_3621 0dc307b7e1539723f2fd4a53d1c80036 422 Gene3D G3DSA:1.20.1250.20 18 403 1.8E-22 T 14-10-2018 GYO_3621 0dc307b7e1539723f2fd4a53d1c80036 422 Pfam PF07690 Major Facilitator Superfamily 31 363 1.0E-17 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 GYO_3621 0dc307b7e1539723f2fd4a53d1c80036 422 SUPERFAMILY SSF103473 28 407 3.14E-31 T 14-10-2018 IPR036259 MFS transporter superfamily GYO_0062 89f271585491177e0936021c5e8f340b 317 Pfam PF13793 N-terminal domain of ribose phosphate pyrophosphokinase 10 126 5.0E-52 T 14-10-2018 IPR029099 Ribose-phosphate pyrophosphokinase, N-terminal domain KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 GYO_0062 89f271585491177e0936021c5e8f340b 317 Pfam PF14572 Phosphoribosyl synthetase-associated domain 208 316 4.1E-26 T 14-10-2018 IPR005946 Ribose-phosphate pyrophosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 GYO_0062 89f271585491177e0936021c5e8f340b 317 Hamap MF_00583_B Putative ribose-phosphate pyrophosphokinase [prs]. 10 317 51.463 T 14-10-2018 IPR037515 Ribose-phosphate pyrophosphokinase, bacterial-type GO:0004749 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|Reactome: R-HSA-73843 GYO_0062 89f271585491177e0936021c5e8f340b 317 Gene3D G3DSA:3.40.50.2020 153 293 6.8E-128 T 14-10-2018 GYO_0062 89f271585491177e0936021c5e8f340b 317 Gene3D G3DSA:3.40.50.2020 13 305 6.8E-128 T 14-10-2018 GYO_0062 89f271585491177e0936021c5e8f340b 317 TIGRFAM TIGR01251 ribP_PPkin: ribose-phosphate diphosphokinase 11 317 1.4E-131 T 14-10-2018 IPR005946 Ribose-phosphate pyrophosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 GYO_0062 89f271585491177e0936021c5e8f340b 317 SUPERFAMILY SSF53271 75 308 1.09E-68 T 14-10-2018 IPR029057 Phosphoribosyltransferase-like GYO_0062 89f271585491177e0936021c5e8f340b 317 ProSitePatterns PS00114 Phosphoribosyl pyrophosphate synthase signature. 134 149 - T 14-10-2018 IPR000842 Phosphoribosyl pyrophosphate synthetase, conserved site GO:0000287|GO:0004749|GO:0009156|GO:0044249 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|Reactome: R-HSA-73843 GYO_0062 89f271585491177e0936021c5e8f340b 317 SMART SM01400 10 126 3.6E-82 T 14-10-2018 GYO_1781 5a21d3166af54f2a2e94dbdb4d841506 410 PRINTS PR00919 Thermophilic metalloprotease (M29) signature 245 264 4.8E-88 T 14-10-2018 IPR000787 Peptidase M29 GO:0004177|GO:0006508 GYO_1781 5a21d3166af54f2a2e94dbdb4d841506 410 PRINTS PR00919 Thermophilic metalloprotease (M29) signature 389 408 4.8E-88 T 14-10-2018 IPR000787 Peptidase M29 GO:0004177|GO:0006508 GYO_1781 5a21d3166af54f2a2e94dbdb4d841506 410 PRINTS PR00919 Thermophilic metalloprotease (M29) signature 363 385 4.8E-88 T 14-10-2018 IPR000787 Peptidase M29 GO:0004177|GO:0006508 GYO_1781 5a21d3166af54f2a2e94dbdb4d841506 410 PRINTS PR00919 Thermophilic metalloprotease (M29) signature 156 178 4.8E-88 T 14-10-2018 IPR000787 Peptidase M29 GO:0004177|GO:0006508 GYO_1781 5a21d3166af54f2a2e94dbdb4d841506 410 PRINTS PR00919 Thermophilic metalloprotease (M29) signature 301 321 4.8E-88 T 14-10-2018 IPR000787 Peptidase M29 GO:0004177|GO:0006508 GYO_1781 5a21d3166af54f2a2e94dbdb4d841506 410 PRINTS PR00919 Thermophilic metalloprotease (M29) signature 324 345 4.8E-88 T 14-10-2018 IPR000787 Peptidase M29 GO:0004177|GO:0006508 GYO_1781 5a21d3166af54f2a2e94dbdb4d841506 410 PRINTS PR00919 Thermophilic metalloprotease (M29) signature 80 99 4.8E-88 T 14-10-2018 IPR000787 Peptidase M29 GO:0004177|GO:0006508 GYO_1781 5a21d3166af54f2a2e94dbdb4d841506 410 PRINTS PR00919 Thermophilic metalloprotease (M29) signature 15 32 4.8E-88 T 14-10-2018 IPR000787 Peptidase M29 GO:0004177|GO:0006508 GYO_1781 5a21d3166af54f2a2e94dbdb4d841506 410 SUPERFAMILY SSF144052 4 409 2.62E-155 T 14-10-2018 GYO_1781 5a21d3166af54f2a2e94dbdb4d841506 410 Pfam PF02073 Thermophilic metalloprotease (M29) 5 408 1.1E-178 T 14-10-2018 IPR000787 Peptidase M29 GO:0004177|GO:0006508 GYO_1781 5a21d3166af54f2a2e94dbdb4d841506 410 Gene3D G3DSA:3.40.1830.10 1 180 1.6E-69 T 14-10-2018 IPR035097 Peptidase M29, N-terminal GYO_3641 e5e5790884a10ae69cf03d6c60c73176 315 Gene3D G3DSA:3.40.50.1980 30 161 1.1E-24 T 14-10-2018 GYO_3641 e5e5790884a10ae69cf03d6c60c73176 315 SUPERFAMILY SSF53807 40 307 1.37E-57 T 14-10-2018 GYO_3641 e5e5790884a10ae69cf03d6c60c73176 315 Gene3D G3DSA:3.40.50.1980 162 315 9.9E-66 T 14-10-2018 GYO_3641 e5e5790884a10ae69cf03d6c60c73176 315 Pfam PF01497 Periplasmic binding protein 80 291 1.9E-33 T 14-10-2018 IPR002491 ABC transporter periplasmic binding domain GYO_2947 19638d9c075463bbe6f281e1c757e416 210 PIRSF PIRSF006324 1 210 4.8E-64 T 14-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 GYO_2947 19638d9c075463bbe6f281e1c757e416 210 TIGRFAM TIGR00949 2A76: homoserine/Threonine efflux protein 18 207 9.5E-67 T 14-10-2018 IPR004778 Homoserine/Threonine efflux protein GO:0016021 GYO_2947 19638d9c075463bbe6f281e1c757e416 210 Pfam PF01810 LysE type translocator 13 206 1.8E-30 T 14-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 GYO_2010 e3ce6a88b997e40d7aab38e1c1cb0f1b 383 Pfam PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal 144 227 1.4E-42 T 14-10-2018 IPR013644 1-deoxy-D-xylulose 5-phosphate reductoisomerase, C-terminal GO:0005515 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 GYO_2010 e3ce6a88b997e40d7aab38e1c1cb0f1b 383 Hamap MF_00183 1-deoxy-D-xylulose 5-phosphate reductoisomerase [dxr]. 4 381 46.657 T 14-10-2018 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 GYO_2010 e3ce6a88b997e40d7aab38e1c1cb0f1b 383 TIGRFAM TIGR00243 Dxr: 1-deoxy-D-xylulose 5-phosphate reductoisomerase 1 378 1.8E-189 T 14-10-2018 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 GYO_2010 e3ce6a88b997e40d7aab38e1c1cb0f1b 383 Gene3D G3DSA:3.40.50.720 1 148 2.9E-47 T 14-10-2018 GYO_2010 e3ce6a88b997e40d7aab38e1c1cb0f1b 383 SUPERFAMILY SSF51735 2 148 3.79E-43 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily GYO_2010 e3ce6a88b997e40d7aab38e1c1cb0f1b 383 Pfam PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase 4 130 1.7E-42 T 14-10-2018 IPR013512 1-deoxy-D-xylulose 5-phosphate reductoisomerase, N-terminal GO:0055114|GO:0070402 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 GYO_2010 e3ce6a88b997e40d7aab38e1c1cb0f1b 383 Gene3D G3DSA:1.10.1740.10 301 383 6.9E-27 T 14-10-2018 GYO_2010 e3ce6a88b997e40d7aab38e1c1cb0f1b 383 SUPERFAMILY SSF69055 290 381 4.84E-30 T 14-10-2018 IPR036169 DXP reductoisomerase, C-terminal domain superfamily KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 GYO_2010 e3ce6a88b997e40d7aab38e1c1cb0f1b 383 PIRSF PIRSF006205 1 383 1.8E-163 T 14-10-2018 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 GYO_2010 e3ce6a88b997e40d7aab38e1c1cb0f1b 383 Pfam PF13288 DXP reductoisomerase C-terminal domain 259 375 3.8E-42 T 14-10-2018 IPR026877 DXP reductoisomerase C-terminal domain KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 GYO_2010 e3ce6a88b997e40d7aab38e1c1cb0f1b 383 SUPERFAMILY SSF55347 125 262 3.27E-61 T 14-10-2018 GYO_1674 1c9d2dbef3d524c3faeb817b469fb442 298 Pfam PF01435 Peptidase family M48 89 297 1.9E-38 T 14-10-2018 IPR001915 Peptidase M48 GO:0004222|GO:0006508 GYO_1674 1c9d2dbef3d524c3faeb817b469fb442 298 Hamap MF_00188 Protease HtpX [htpX]. 2 298 24.083 T 14-10-2018 IPR022919 Peptidase M48, protease HtpX, putative GO:0004222 GYO_1674 1c9d2dbef3d524c3faeb817b469fb442 298 Gene3D G3DSA:3.30.2010.10 80 173 3.8E-30 T 14-10-2018 GYO_3002 65cdba7b2af5e7ea56f7550e6d2c2ded 786 Pfam PF02272 DHHA1 domain 315 437 8.9E-23 T 14-10-2018 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7|Reactome: R-HSA-379716 GYO_3002 65cdba7b2af5e7ea56f7550e6d2c2ded 786 Pfam PF01368 DHH family 83 213 2.2E-11 T 14-10-2018 IPR001667 DDH domain KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 GYO_3002 65cdba7b2af5e7ea56f7550e6d2c2ded 786 SUPERFAMILY SSF64182 57 450 1.02E-123 T 14-10-2018 IPR038763 DHH phosphoesterase superfamily GYO_3002 65cdba7b2af5e7ea56f7550e6d2c2ded 786 Gene3D G3DSA:3.10.310.30 319 442 2.3E-36 T 14-10-2018 GYO_3002 65cdba7b2af5e7ea56f7550e6d2c2ded 786 Pfam PF10141 Single-strand DNA-specific exonuclease, C terminal domain 566 769 4.0E-69 T 14-10-2018 IPR018779 Single-stranded-DNA-specific exonuclease RecJ, C-terminal GYO_3002 65cdba7b2af5e7ea56f7550e6d2c2ded 786 TIGRFAM TIGR00644 recJ: single-stranded-DNA-specific exonuclease RecJ 28 559 3.1E-183 T 14-10-2018 IPR004610 Bacterial RecJ exonuclease GO:0006281|GO:0006310|GO:0008409 GYO_3002 65cdba7b2af5e7ea56f7550e6d2c2ded 786 Gene3D G3DSA:3.90.1640.30 57 318 1.8E-97 T 14-10-2018 GYO_3517 236e6a43ff07caa2c17726fec5f950a2 309 Pfam PF08544 GHMP kinases C terminal 204 282 5.2E-10 T 14-10-2018 IPR013750 GHMP kinase, C-terminal domain GYO_3517 236e6a43ff07caa2c17726fec5f950a2 309 SUPERFAMILY SSF55060 164 284 6.84E-33 T 14-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily GYO_3517 236e6a43ff07caa2c17726fec5f950a2 309 TIGRFAM TIGR00191 thrB: homoserine kinase 8 305 2.3E-112 T 14-10-2018 IPR000870 Homoserine kinase GO:0004413|GO:0005524|GO:0006566 KEGG: 00260+2.7.1.39|MetaCyc: PWY-702 GYO_3517 236e6a43ff07caa2c17726fec5f950a2 309 Gene3D G3DSA:3.30.70.890 166 285 8.6E-36 T 14-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily GYO_3517 236e6a43ff07caa2c17726fec5f950a2 309 PIRSF PIRSF000676 4 301 1.8E-95 T 14-10-2018 IPR000870 Homoserine kinase GO:0004413|GO:0005524|GO:0006566 KEGG: 00260+2.7.1.39|MetaCyc: PWY-702 GYO_3517 236e6a43ff07caa2c17726fec5f950a2 309 Gene3D G3DSA:3.30.230.10 6 165 1.2E-43 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup GYO_3517 236e6a43ff07caa2c17726fec5f950a2 309 Hamap MF_00384 Homoserine kinase [thrB]. 10 299 29.974 T 14-10-2018 IPR000870 Homoserine kinase GO:0004413|GO:0005524|GO:0006566 KEGG: 00260+2.7.1.39|MetaCyc: PWY-702 GYO_3517 236e6a43ff07caa2c17726fec5f950a2 309 ProSitePatterns PS00627 GHMP kinases putative ATP-binding domain. 90 101 - T 14-10-2018 IPR006203 GHMP kinase, ATP-binding, conserved site GO:0005524 GYO_3517 236e6a43ff07caa2c17726fec5f950a2 309 Pfam PF00288 GHMP kinases N terminal domain 83 144 7.5E-13 T 14-10-2018 IPR006204 GHMP kinase N-terminal domain GO:0005524 GYO_3517 236e6a43ff07caa2c17726fec5f950a2 309 PRINTS PR00958 Homoserine kinase signature 169 186 5.1E-39 T 14-10-2018 GYO_3517 236e6a43ff07caa2c17726fec5f950a2 309 PRINTS PR00958 Homoserine kinase signature 15 30 5.1E-39 T 14-10-2018 GYO_3517 236e6a43ff07caa2c17726fec5f950a2 309 PRINTS PR00958 Homoserine kinase signature 131 144 5.1E-39 T 14-10-2018 GYO_3517 236e6a43ff07caa2c17726fec5f950a2 309 PRINTS PR00958 Homoserine kinase signature 249 264 5.1E-39 T 14-10-2018 GYO_3517 236e6a43ff07caa2c17726fec5f950a2 309 PRINTS PR00958 Homoserine kinase signature 97 112 5.1E-39 T 14-10-2018 GYO_3517 236e6a43ff07caa2c17726fec5f950a2 309 SUPERFAMILY SSF54211 6 160 5.01E-32 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold GYO_4149 4d30c30c4b193fea3c825bf245280b8d 359 SUPERFAMILY SSF103481 102 203 6.93E-13 T 14-10-2018 GYO_4149 4d30c30c4b193fea3c825bf245280b8d 359 Pfam PF00892 EamA-like transporter family 70 200 1.5E-20 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 GYO_4149 4d30c30c4b193fea3c825bf245280b8d 359 Pfam PF00892 EamA-like transporter family 212 344 1.2E-23 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 GYO_4149 4d30c30c4b193fea3c825bf245280b8d 359 TIGRFAM TIGR00950 2A78: carboxylate/amino acid/amine transporter 80 341 2.7E-77 T 14-10-2018 IPR004779 Carboxylate/Amino Acid/Amine Transporter GO:0016021 GYO_4149 4d30c30c4b193fea3c825bf245280b8d 359 SUPERFAMILY SSF103481 247 348 1.83E-13 T 14-10-2018 GYO_0336 271edb597d56c6dc7e6aabbdd977748a 57 Pfam PF08863 YolD-like protein 1 55 9.8E-11 T 14-10-2018 IPR014962 YolD-like protein GYO_0257 271edb597d56c6dc7e6aabbdd977748a 57 Pfam PF08863 YolD-like protein 1 55 9.8E-11 T 14-10-2018 IPR014962 YolD-like protein GYO_2684 8769f66e47dcc8c837b69b2687629036 149 SUPERFAMILY SSF55252 80 148 6.54E-23 T 14-10-2018 IPR036251 Arginine repressor, C-terminal domain superfamily GO:0034618|GO:0051259 GYO_2684 8769f66e47dcc8c837b69b2687629036 149 ProDom PD007402 ARGININE REPRESSOR TRANSCRIPTION BIOSYNTHESIS DNA-BINDING REGULATION AMINO-ACID ARGR TRANSCRIPTIONAL FAMILY 87 149 5.0E-30 T 14-10-2018 IPR020899 Arginine repressor, C-terminal GO:0034618|GO:0051259 GYO_2684 8769f66e47dcc8c837b69b2687629036 149 Pfam PF01316 Arginine repressor, DNA binding domain 1 70 9.6E-32 T 14-10-2018 IPR020900 Arginine repressor, DNA-binding domain GO:0003700|GO:0006355|GO:0006525 GYO_2684 8769f66e47dcc8c837b69b2687629036 149 Hamap MF_00173 Arginine repressor [argR]. 1 149 72.523 T 14-10-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 GYO_2684 8769f66e47dcc8c837b69b2687629036 149 PRINTS PR01467 Bacterial arginine repressor signature 118 133 1.3E-29 T 14-10-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 GYO_2684 8769f66e47dcc8c837b69b2687629036 149 PRINTS PR01467 Bacterial arginine repressor signature 21 34 1.3E-29 T 14-10-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 GYO_2684 8769f66e47dcc8c837b69b2687629036 149 PRINTS PR01467 Bacterial arginine repressor signature 37 52 1.3E-29 T 14-10-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 GYO_2684 8769f66e47dcc8c837b69b2687629036 149 PRINTS PR01467 Bacterial arginine repressor signature 88 101 1.3E-29 T 14-10-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 GYO_2684 8769f66e47dcc8c837b69b2687629036 149 Gene3D G3DSA:1.10.10.10 4 67 2.8E-30 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily GYO_2684 8769f66e47dcc8c837b69b2687629036 149 TIGRFAM TIGR01529 argR_whole: arginine repressor 5 149 1.9E-60 T 14-10-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 GYO_2684 8769f66e47dcc8c837b69b2687629036 149 SUPERFAMILY SSF46785 3 78 3.93E-24 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily GYO_2684 8769f66e47dcc8c837b69b2687629036 149 Gene3D G3DSA:3.30.1360.40 68 149 8.4E-35 T 14-10-2018 GYO_2684 8769f66e47dcc8c837b69b2687629036 149 Pfam PF02863 Arginine repressor, C-terminal domain 81 145 5.7E-28 T 14-10-2018 IPR020899 Arginine repressor, C-terminal GO:0034618|GO:0051259 GYO_0151 ee5c35d3964ef5de2c64ff278370d027 87 PRINTS PR00973 Ribosomal protein S17 family signature 26 49 1.7E-11 T 14-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 GYO_0151 ee5c35d3964ef5de2c64ff278370d027 87 PRINTS PR00973 Ribosomal protein S17 family signature 68 75 1.7E-11 T 14-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 GYO_0151 ee5c35d3964ef5de2c64ff278370d027 87 PRINTS PR00973 Ribosomal protein S17 family signature 58 68 1.7E-11 T 14-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 GYO_0151 ee5c35d3964ef5de2c64ff278370d027 87 ProSitePatterns PS00056 Ribosomal protein S17 signature. 58 70 - T 14-10-2018 IPR019979 Ribosomal protein S17, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 GYO_0151 ee5c35d3964ef5de2c64ff278370d027 87 ProDom PD001295 RIBOSOMAL S17 30S RIBONUCLEOPROTEIN RRNA-BINDING RNA-BINDING 40S S11 S17P S11 7 78 2.0E-35 T 14-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 GYO_0151 ee5c35d3964ef5de2c64ff278370d027 87 TIGRFAM TIGR03635 uS17_bact: ribosomal protein uS17 7 78 1.8E-35 T 14-10-2018 IPR019984 30S ribosomal protein S17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 GYO_0151 ee5c35d3964ef5de2c64ff278370d027 87 Hamap MF_01345_B 30S ribosomal protein S17 [rpsQ]. 7 82 24.149 T 14-10-2018 IPR019984 30S ribosomal protein S17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 GYO_0151 ee5c35d3964ef5de2c64ff278370d027 87 Gene3D G3DSA:2.40.50.140 6 86 1.5E-35 T 14-10-2018 GYO_0151 ee5c35d3964ef5de2c64ff278370d027 87 Pfam PF00366 Ribosomal protein S17 12 79 2.7E-32 T 14-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 GYO_0151 ee5c35d3964ef5de2c64ff278370d027 87 SUPERFAMILY SSF50249 7 84 1.29E-31 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold GYO_2057 8eb067430abee0d849783b8513699038 143 PIRSF PIRSF021287 1 123 2.1E-53 T 14-10-2018 IPR016783 Biofilm formation YmcA GYO_2057 8eb067430abee0d849783b8513699038 143 Pfam PF06133 Control of competence regulator ComK, YlbF/YmcA 9 113 2.5E-21 T 14-10-2018 IPR010368 Control of competence regulator ComK, YlbF/YmcA GYO_2057 8eb067430abee0d849783b8513699038 143 SUPERFAMILY SSF158622 4 123 3.53E-34 T 14-10-2018 IPR023378 YheA/YmcA-like domain superfamily GYO_2057 8eb067430abee0d849783b8513699038 143 Gene3D G3DSA:1.20.1500.10 1 124 7.3E-37 T 14-10-2018 IPR023378 YheA/YmcA-like domain superfamily GYO_3503 27e5daa0c476af49b84264f9d90ec545 332 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 156 174 4.9E-16 T 14-10-2018 GYO_3503 27e5daa0c476af49b84264f9d90ec545 332 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 10 29 4.9E-16 T 14-10-2018 GYO_3503 27e5daa0c476af49b84264f9d90ec545 332 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 265 287 4.9E-16 T 14-10-2018 GYO_3503 27e5daa0c476af49b84264f9d90ec545 332 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 8 291 7.3E-28 T 14-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 GYO_3503 27e5daa0c476af49b84264f9d90ec545 332 Hamap MF_01685 Ferredoxin--NADP reductase. 7 328 44.571 T 14-10-2018 IPR022890 Ferredoxin--NADP reductase, type 2 GO:0004324|GO:0055114 KEGG: 00195+1.18.1.2|MetaCyc: PWY-101 GYO_3503 27e5daa0c476af49b84264f9d90ec545 332 Gene3D G3DSA:3.50.50.60 7 304 4.2E-123 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily GYO_3503 27e5daa0c476af49b84264f9d90ec545 332 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 113 121 1.5E-25 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 GYO_3503 27e5daa0c476af49b84264f9d90ec545 332 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 9 31 1.5E-25 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 GYO_3503 27e5daa0c476af49b84264f9d90ec545 332 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 66 76 1.5E-25 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 GYO_3503 27e5daa0c476af49b84264f9d90ec545 332 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 152 176 1.5E-25 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 GYO_3503 27e5daa0c476af49b84264f9d90ec545 332 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 203 219 1.5E-25 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 GYO_3503 27e5daa0c476af49b84264f9d90ec545 332 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 275 293 1.5E-25 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 GYO_3503 27e5daa0c476af49b84264f9d90ec545 332 Gene3D G3DSA:3.50.50.60 128 246 4.2E-123 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily GYO_3503 27e5daa0c476af49b84264f9d90ec545 332 SUPERFAMILY SSF51905 8 313 1.81E-39 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily GYO_1987 a9db6464a99e085e061c36f4de8e109c 378 SUPERFAMILY SSF101801 295 376 5.75E-24 T 14-10-2018 IPR036429 SpoA-like superfamily GYO_1987 a9db6464a99e085e061c36f4de8e109c 378 Pfam PF04509 CheC-like family 133 169 5.0E-16 T 14-10-2018 IPR007597 CheC-like protein GO:0016787 GYO_1987 a9db6464a99e085e061c36f4de8e109c 378 Pfam PF04509 CheC-like family 36 72 1.2E-15 T 14-10-2018 IPR007597 CheC-like protein GO:0016787 GYO_1987 a9db6464a99e085e061c36f4de8e109c 378 SUPERFAMILY SSF103039 33 221 7.19E-52 T 14-10-2018 IPR028976 CheC-like superfamily GYO_1987 a9db6464a99e085e061c36f4de8e109c 378 Gene3D G3DSA:2.30.330.10 285 378 5.9E-35 T 14-10-2018 IPR036429 SpoA-like superfamily GYO_1987 a9db6464a99e085e061c36f4de8e109c 378 TIGRFAM TIGR02480 fliN: flagellar motor switch protein FliN 295 370 1.3E-30 T 14-10-2018 IPR012826 Flagellar motor switch FliN GO:0006935|GO:0009288|GO:0016020|GO:0071973 GYO_1987 a9db6464a99e085e061c36f4de8e109c 378 PRINTS PR00956 Flagellar motor switch protein FliN signature 298 314 2.0E-29 T 14-10-2018 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 GYO_1987 a9db6464a99e085e061c36f4de8e109c 378 PRINTS PR00956 Flagellar motor switch protein FliN signature 344 359 2.0E-29 T 14-10-2018 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 GYO_1987 a9db6464a99e085e061c36f4de8e109c 378 PRINTS PR00956 Flagellar motor switch protein FliN signature 315 331 2.0E-29 T 14-10-2018 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 GYO_1987 a9db6464a99e085e061c36f4de8e109c 378 PRINTS PR00956 Flagellar motor switch protein FliN signature 331 344 2.0E-29 T 14-10-2018 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 GYO_1987 a9db6464a99e085e061c36f4de8e109c 378 Gene3D G3DSA:3.40.1550.10 32 227 6.8E-56 T 14-10-2018 IPR028976 CheC-like superfamily GYO_1987 a9db6464a99e085e061c36f4de8e109c 378 Pfam PF01052 Type III flagellar switch regulator (C-ring) FliN C-term 298 368 4.0E-24 T 14-10-2018 IPR001543 Surface presentation of antigen (SpoA) GYO_0445 45d83b32d75a6b090f64f720d89c8472 308 SUPERFAMILY SSF51569 8 297 5.13E-62 T 14-10-2018 GYO_0445 45d83b32d75a6b090f64f720d89c8472 308 Hamap MF_00694 Probable 5-dehydro-4-deoxyglucarate dehydratase. 7 298 41.572 T 14-10-2018 IPR017655 5-dehydro-4-deoxyglucarate dehydratase GO:0016052|GO:0047448 KEGG: 00053+4.2.1.41|MetaCyc: PWY-6486|MetaCyc: PWY-6497|MetaCyc: PWY-6499|MetaCyc: PWY-6501 GYO_0445 45d83b32d75a6b090f64f720d89c8472 308 Pfam PF00701 Dihydrodipicolinate synthetase family 8 297 4.0E-102 T 14-10-2018 IPR002220 DapA-like GO:0016829 GYO_0445 45d83b32d75a6b090f64f720d89c8472 308 Gene3D G3DSA:3.20.20.70 3 304 6.2E-79 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 GYO_0445 45d83b32d75a6b090f64f720d89c8472 308 TIGRFAM TIGR03249 KdgD: 5-dehydro-4-deoxyglucarate dehydratase 5 297 8.8E-142 T 14-10-2018 IPR017655 5-dehydro-4-deoxyglucarate dehydratase GO:0016052|GO:0047448 KEGG: 00053+4.2.1.41|MetaCyc: PWY-6486|MetaCyc: PWY-6497|MetaCyc: PWY-6499|MetaCyc: PWY-6501 GYO_0445 45d83b32d75a6b090f64f720d89c8472 308 SMART SM01130 7 298 4.5E-67 T 14-10-2018 IPR002220 DapA-like GO:0016829 GYO_0445 45d83b32d75a6b090f64f720d89c8472 308 PIRSF PIRSF001365 5 306 1.3E-52 T 14-10-2018 IPR002220 DapA-like GO:0016829 GYO_0483 5066743a693b71e808410ea3d51dea54 167 Pfam PF13539 D-alanyl-D-alanine carboxypeptidase 96 164 9.4E-21 T 14-10-2018 IPR039561 Peptidase M15C GO:0008233 GYO_0483 5066743a693b71e808410ea3d51dea54 167 Gene3D G3DSA:3.30.1380.10 28 164 4.2E-43 T 14-10-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 GYO_0483 5066743a693b71e808410ea3d51dea54 167 SUPERFAMILY SSF55166 43 165 1.33E-31 T 14-10-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 GYO_2610 5712c7396f8b3ec00c41b3094b0fcee1 112 Pfam PF08863 YolD-like protein 18 110 1.2E-26 T 14-10-2018 IPR014962 YolD-like protein GYO_1619 22443c1b3b418dc75cfc482dec9a6512 329 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 231 298 6.7E-18 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 GYO_1619 22443c1b3b418dc75cfc482dec9a6512 329 ProSitePatterns PS00211 ABC transporters family signature. 152 166 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 GYO_1619 22443c1b3b418dc75cfc482dec9a6512 329 Gene3D G3DSA:3.40.50.300 5 329 1.6E-101 T 14-10-2018 GYO_1619 22443c1b3b418dc75cfc482dec9a6512 329 SUPERFAMILY SSF52540 6 251 1.57E-72 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase GYO_1619 22443c1b3b418dc75cfc482dec9a6512 329 SMART SM00382 36 229 7.2E-13 T 14-10-2018 IPR003593 AAA+ ATPase domain GYO_1619 22443c1b3b418dc75cfc482dec9a6512 329 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 230 318 3.4E-26 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 GYO_1619 22443c1b3b418dc75cfc482dec9a6512 329 Pfam PF00005 ABC transporter 28 179 3.9E-32 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 GYO_1633 0473366d7b3d89bfa5f1c96b4073e3c8 141 Gene3D G3DSA:2.20.25.10 4 45 4.7E-11 T 14-10-2018 GYO_1633 0473366d7b3d89bfa5f1c96b4073e3c8 141 SUPERFAMILY SSF82784 5 139 8.38E-34 T 14-10-2018 IPR036102 OsmC/Ohr superfamily GYO_1633 0473366d7b3d89bfa5f1c96b4073e3c8 141 Gene3D G3DSA:3.30.300.20 47 140 1.3E-32 T 14-10-2018 IPR015946 K homology domain-like, alpha/beta GYO_1633 0473366d7b3d89bfa5f1c96b4073e3c8 141 Pfam PF02566 OsmC-like protein 44 138 2.4E-18 T 14-10-2018 IPR003718 OsmC/Ohr family GYO_1633 0473366d7b3d89bfa5f1c96b4073e3c8 141 TIGRFAM TIGR03561 organ_hyd_perox: peroxiredoxin, Ohr subfamily 5 139 8.4E-50 T 14-10-2018 IPR019953 Organic hydroperoxide resistance protein famiy GO:0006979 GYO_0818 89bb904bad4720020dac59386ecd3905 209 Pfam PF00881 Nitroreductase family 11 189 3.3E-32 T 14-10-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 GYO_0818 89bb904bad4720020dac59386ecd3905 209 Gene3D G3DSA:3.40.109.10 2 209 7.0E-63 T 14-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 GYO_0818 89bb904bad4720020dac59386ecd3905 209 SUPERFAMILY SSF55469 6 206 3.4E-60 T 14-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 GYO_4497 f5f11301bf2096384daabc1c0c6ad5e7 299 Pfam PF02517 CAAX protease self-immunity 142 240 2.7E-14 T 14-10-2018 IPR003675 CAAX amino terminal protease GO:0016020 Reactome: R-HSA-5689880 GYO_4376 a9ba01eccec7212d7a2d39f324ce53d4 289 Pfam PF01261 Xylose isomerase-like TIM barrel 23 241 3.9E-38 T 14-10-2018 IPR013022 Xylose isomerase-like, TIM barrel domain GYO_4376 a9ba01eccec7212d7a2d39f324ce53d4 289 Gene3D G3DSA:3.20.20.150 1 285 3.5E-47 T 14-10-2018 GYO_4376 a9ba01eccec7212d7a2d39f324ce53d4 289 SUPERFAMILY SSF51658 1 286 8.38E-55 T 14-10-2018 IPR036237 Xylose isomerase-like superfamily GYO_1850 f536a063552629a8d62fc56533dd7602 341 Pfam PF05362 Lon protease (S16) C-terminal proteolytic domain 232 331 9.9E-12 T 14-10-2018 IPR008269 Peptidase S16, Lon proteolytic domain GO:0004176|GO:0004252|GO:0006508 GYO_1850 f536a063552629a8d62fc56533dd7602 341 Gene3D G3DSA:3.30.230.10 211 340 6.3E-18 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup GYO_1850 f536a063552629a8d62fc56533dd7602 341 Gene3D G3DSA:2.30.42.10 128 206 3.8E-30 T 14-10-2018 GYO_1850 f536a063552629a8d62fc56533dd7602 341 SUPERFAMILY SSF54211 228 333 3.19E-20 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold GYO_1850 f536a063552629a8d62fc56533dd7602 341 SMART SM00228 119 186 5.2E-5 T 14-10-2018 IPR001478 PDZ domain GO:0005515 GYO_1850 f536a063552629a8d62fc56533dd7602 341 SUPERFAMILY SSF50156 128 214 1.45E-15 T 14-10-2018 IPR036034 PDZ superfamily GO:0005515 GYO_1850 f536a063552629a8d62fc56533dd7602 341 Pfam PF13180 PDZ domain 128 195 3.5E-13 T 14-10-2018 IPR001478 PDZ domain GO:0005515 GYO_0592 4141a1ba79a12c8a940ec00bdbb5ccf1 472 PRINTS PR00344 Bacterial sensor protein C-terminal signature 411 421 2.5E-16 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 GYO_0592 4141a1ba79a12c8a940ec00bdbb5ccf1 472 PRINTS PR00344 Bacterial sensor protein C-terminal signature 393 407 2.5E-16 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 GYO_0592 4141a1ba79a12c8a940ec00bdbb5ccf1 472 PRINTS PR00344 Bacterial sensor protein C-terminal signature 453 466 2.5E-16 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 GYO_0592 4141a1ba79a12c8a940ec00bdbb5ccf1 472 PRINTS PR00344 Bacterial sensor protein C-terminal signature 429 447 2.5E-16 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 GYO_0592 4141a1ba79a12c8a940ec00bdbb5ccf1 472 Pfam PF00672 HAMP domain 189 234 5.5E-9 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 GYO_0592 4141a1ba79a12c8a940ec00bdbb5ccf1 472 Gene3D G3DSA:3.30.565.10 314 472 3.5E-40 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily GYO_0592 4141a1ba79a12c8a940ec00bdbb5ccf1 472 SUPERFAMILY SSF55874 303 467 7.33E-40 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily GYO_0592 4141a1ba79a12c8a940ec00bdbb5ccf1 472 Gene3D G3DSA:1.20.1480.50 151 242 7.3E-13 T 14-10-2018 GYO_0592 4141a1ba79a12c8a940ec00bdbb5ccf1 472 SUPERFAMILY SSF47384 229 313 1.82E-17 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 GYO_0592 4141a1ba79a12c8a940ec00bdbb5ccf1 472 SMART SM00388 246 312 5.7E-18 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 GYO_0592 4141a1ba79a12c8a940ec00bdbb5ccf1 472 SMART SM00387 357 469 4.0E-35 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase GYO_0592 4141a1ba79a12c8a940ec00bdbb5ccf1 472 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 358 468 1.3E-26 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase GYO_0592 4141a1ba79a12c8a940ec00bdbb5ccf1 472 SMART SM00304 186 238 8.6E-12 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 GYO_0592 4141a1ba79a12c8a940ec00bdbb5ccf1 472 Pfam PF00512 His Kinase A (phospho-acceptor) domain 247 311 3.4E-14 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 GYO_0592 4141a1ba79a12c8a940ec00bdbb5ccf1 472 SUPERFAMILY SSF158472 189 235 1.7E-9 T 14-10-2018 GYO_0592 4141a1ba79a12c8a940ec00bdbb5ccf1 472 Gene3D G3DSA:1.10.287.130 243 313 1.8E-20 T 14-10-2018 GYO_0681 cdf0651cbe8ff59347e4085531a7acf7 492 PIRSF PIRSF026631 1 492 3.1E-160 T 14-10-2018 IPR014529 Uncharacterised conserved protein UCP026631 GYO_0681 cdf0651cbe8ff59347e4085531a7acf7 492 Pfam PF03703 Bacterial PH domain 66 145 3.2E-19 T 14-10-2018 IPR005182 Domain of unknown function DUF304 GYO_0681 cdf0651cbe8ff59347e4085531a7acf7 492 Pfam PF03703 Bacterial PH domain 259 335 5.2E-14 T 14-10-2018 IPR005182 Domain of unknown function DUF304 GYO_0681 cdf0651cbe8ff59347e4085531a7acf7 492 Pfam PF03703 Bacterial PH domain 408 485 8.2E-10 T 14-10-2018 IPR005182 Domain of unknown function DUF304 GYO_2469 ecbd4e39c51ba94e66bcf27748ce9bef 277 Hamap MF_00156 3-methyl-2-oxobutanoate hydroxymethyltransferase [panB]. 2 263 42.647 T 14-10-2018 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 GYO_2469 ecbd4e39c51ba94e66bcf27748ce9bef 277 Pfam PF02548 Ketopantoate hydroxymethyltransferase 6 258 5.8E-110 T 14-10-2018 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 GYO_2469 ecbd4e39c51ba94e66bcf27748ce9bef 277 PIRSF PIRSF000388 1 266 7.1E-109 T 14-10-2018 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 GYO_2469 ecbd4e39c51ba94e66bcf27748ce9bef 277 Gene3D G3DSA:3.20.20.60 2 271 5.0E-112 T 14-10-2018 GYO_2469 ecbd4e39c51ba94e66bcf27748ce9bef 277 SUPERFAMILY SSF51621 3 263 1.1E-104 T 14-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 GYO_2469 ecbd4e39c51ba94e66bcf27748ce9bef 277 TIGRFAM TIGR00222 panB: 3-methyl-2-oxobutanoate hydroxymethyltransferase 1 264 4.8E-136 T 14-10-2018 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 GYO_2248 b84919a635280c94d903bba8134a3fbc 238 PIRSF PIRSF029958 5 237 2.1E-61 T 14-10-2018 IPR008701 Necrosis inducing protein GYO_2248 b84919a635280c94d903bba8134a3fbc 238 Pfam PF05630 Necrosis inducing protein (NPP1) 46 235 1.9E-71 T 14-10-2018 IPR008701 Necrosis inducing protein GYO_2733 f34c13e20e952b55357828d478003b89 98 SUPERFAMILY SSF54523 6 80 3.77E-12 T 14-10-2018 GYO_2733 f34c13e20e952b55357828d478003b89 98 Gene3D G3DSA:3.30.700.10 6 65 9.6E-9 T 14-10-2018 GYO_2733 f34c13e20e952b55357828d478003b89 98 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 4 26 3.6E-8 T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site GYO_2733 f34c13e20e952b55357828d478003b89 98 PIRSF PIRSF029928 1 97 2.0E-33 T 14-10-2018 IPR016940 ComG operon protein C GO:0030420 GYO_2733 f34c13e20e952b55357828d478003b89 98 Pfam PF07963 Prokaryotic N-terminal methylation motif 2 25 7.5E-9 T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site GYO_2733 f34c13e20e952b55357828d478003b89 98 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 4 24 - T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site GYO_2518 8dbc407e612c9023daec57d8b4ca900f 349 SMART SM01240 23 336 0.0046 T 14-10-2018 GYO_2518 8dbc407e612c9023daec57d8b4ca900f 349 TIGRFAM TIGR02151 IPP_isom_2: isopentenyl-diphosphate delta-isomerase, type 2 5 329 1.7E-128 T 14-10-2018 IPR011179 Isopentenyl-diphosphate delta-isomerase, FMN-dependent GO:0004452|GO:0005737|GO:0008299|GO:0010181 KEGG: 00900+5.3.3.2|MetaCyc: PWY-5123|MetaCyc: PWY-6174|MetaCyc: PWY-6383|MetaCyc: PWY-6859|MetaCyc: PWY-7102|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-7560|MetaCyc: PWY-922 GYO_2518 8dbc407e612c9023daec57d8b4ca900f 349 SUPERFAMILY SSF51395 23 346 2.01E-90 T 14-10-2018 GYO_2518 8dbc407e612c9023daec57d8b4ca900f 349 Gene3D G3DSA:3.20.20.70 2 349 2.0E-130 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 GYO_2518 8dbc407e612c9023daec57d8b4ca900f 349 Pfam PF01070 FMN-dependent dehydrogenase 166 324 2.3E-25 T 14-10-2018 IPR000262 FMN-dependent dehydrogenase GO:0016491 Reactome: R-HSA-9033241 GYO_2518 8dbc407e612c9023daec57d8b4ca900f 349 PIRSF PIRSF003314 1 340 1.4E-129 T 14-10-2018 IPR011179 Isopentenyl-diphosphate delta-isomerase, FMN-dependent GO:0004452|GO:0005737|GO:0008299|GO:0010181 KEGG: 00900+5.3.3.2|MetaCyc: PWY-5123|MetaCyc: PWY-6174|MetaCyc: PWY-6383|MetaCyc: PWY-6859|MetaCyc: PWY-7102|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-7560|MetaCyc: PWY-922 GYO_2518 8dbc407e612c9023daec57d8b4ca900f 349 Hamap MF_00354 Isopentenyl-diphosphate delta-isomerase [fni]. 3 330 38.985 T 14-10-2018 IPR011179 Isopentenyl-diphosphate delta-isomerase, FMN-dependent GO:0004452|GO:0005737|GO:0008299|GO:0010181 KEGG: 00900+5.3.3.2|MetaCyc: PWY-5123|MetaCyc: PWY-6174|MetaCyc: PWY-6383|MetaCyc: PWY-6859|MetaCyc: PWY-7102|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-7560|MetaCyc: PWY-922 GYO_4204 ee347a60e94b88afd0ee74097a0d1e8b 381 Gene3D G3DSA:3.40.630.30 12 277 2.0E-124 T 14-10-2018 GYO_4204 ee347a60e94b88afd0ee74097a0d1e8b 381 Gene3D G3DSA:3.40.630.30 128 381 2.0E-124 T 14-10-2018 GYO_4204 ee347a60e94b88afd0ee74097a0d1e8b 381 SUPERFAMILY SSF55718 278 381 1.81E-20 T 14-10-2018 IPR036527 SCP2 sterol-binding domain superfamily GYO_4204 ee347a60e94b88afd0ee74097a0d1e8b 381 Pfam PF13527 Acetyltransferase (GNAT) domain 6 127 6.9E-35 T 14-10-2018 GYO_4204 ee347a60e94b88afd0ee74097a0d1e8b 381 Pfam PF13530 Sterol carrier protein domain 173 377 6.4E-50 T 14-10-2018 IPR025559 Enhanced intracellular survival protein domain GYO_4204 ee347a60e94b88afd0ee74097a0d1e8b 381 SUPERFAMILY SSF55729 4 277 2.97E-66 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase GYO_4204 ee347a60e94b88afd0ee74097a0d1e8b 381 Gene3D G3DSA:3.30.1050.10 278 371 2.0E-124 T 14-10-2018 IPR036527 SCP2 sterol-binding domain superfamily GYO_1739 911f7c5155802e93bdb70a7bf01f6238 430 TIGRFAM TIGR00900 2A0121: H+ Antiporter protein 9 377 3.4E-129 T 14-10-2018 IPR004751 Drug antiporter protein GO:0015307|GO:0015893 GYO_1739 911f7c5155802e93bdb70a7bf01f6238 430 SUPERFAMILY SSF103473 5 407 8.89E-41 T 14-10-2018 IPR036259 MFS transporter superfamily GYO_1739 911f7c5155802e93bdb70a7bf01f6238 430 Pfam PF07690 Major Facilitator Superfamily 12 359 7.6E-28 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 GYO_1739 911f7c5155802e93bdb70a7bf01f6238 430 Gene3D G3DSA:1.20.1250.20 2 404 5.8E-38 T 14-10-2018 GYO_3267 f308180e32944fc2fd8bea92b9ad0f7c 395 PRINTS PR00385 P450 superfamily signature 235 252 5.0E-6 T 14-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 GYO_3267 f308180e32944fc2fd8bea92b9ad0f7c 395 PRINTS PR00385 P450 superfamily signature 336 345 5.0E-6 T 14-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 GYO_3267 f308180e32944fc2fd8bea92b9ad0f7c 395 PRINTS PR00385 P450 superfamily signature 270 281 5.0E-6 T 14-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 GYO_3267 f308180e32944fc2fd8bea92b9ad0f7c 395 PRINTS PR00385 P450 superfamily signature 345 356 5.0E-6 T 14-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 GYO_3267 f308180e32944fc2fd8bea92b9ad0f7c 395 SUPERFAMILY SSF48264 11 394 1.7E-96 T 14-10-2018 IPR036396 Cytochrome P450 superfamily GO:0005506|GO:0016705|GO:0020037|GO:0055114 GYO_3267 f308180e32944fc2fd8bea92b9ad0f7c 395 Gene3D G3DSA:1.10.630.20 341 395 3.7E-15 T 14-10-2018 GYO_3267 f308180e32944fc2fd8bea92b9ad0f7c 395 Gene3D G3DSA:1.10.630.20 60 282 1.3E-120 T 14-10-2018 GYO_3267 f308180e32944fc2fd8bea92b9ad0f7c 395 ProSitePatterns PS00086 Cytochrome P450 cysteine heme-iron ligand signature. 338 347 - T 14-10-2018 IPR017972 Cytochrome P450, conserved site GO:0016705|GO:0055114 GYO_3267 f308180e32944fc2fd8bea92b9ad0f7c 395 Pfam PF00067 Cytochrome P450 28 365 5.7E-34 T 14-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 GYO_3267 f308180e32944fc2fd8bea92b9ad0f7c 395 Gene3D G3DSA:3.30.43.20 15 315 1.3E-120 T 14-10-2018 GYO_3267 f308180e32944fc2fd8bea92b9ad0f7c 395 PRINTS PR00359 B-class P450 signature 147 162 7.4E-54 T 14-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 GYO_3267 f308180e32944fc2fd8bea92b9ad0f7c 395 PRINTS PR00359 B-class P450 signature 270 281 7.4E-54 T 14-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 GYO_3267 f308180e32944fc2fd8bea92b9ad0f7c 395 PRINTS PR00359 B-class P450 signature 345 356 7.4E-54 T 14-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 GYO_3267 f308180e32944fc2fd8bea92b9ad0f7c 395 PRINTS PR00359 B-class P450 signature 84 95 7.4E-54 T 14-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 GYO_3267 f308180e32944fc2fd8bea92b9ad0f7c 395 PRINTS PR00359 B-class P450 signature 287 314 7.4E-54 T 14-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 GYO_3267 f308180e32944fc2fd8bea92b9ad0f7c 395 PRINTS PR00359 B-class P450 signature 336 345 7.4E-54 T 14-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 GYO_3267 f308180e32944fc2fd8bea92b9ad0f7c 395 PRINTS PR00359 B-class P450 signature 130 146 7.4E-54 T 14-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 GYO_3267 f308180e32944fc2fd8bea92b9ad0f7c 395 PRINTS PR00359 B-class P450 signature 190 212 7.4E-54 T 14-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 GYO_3267 f308180e32944fc2fd8bea92b9ad0f7c 395 PRINTS PR00359 B-class P450 signature 315 330 7.4E-54 T 14-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 GYO_3074 aceb1c1a377e314cdb8aa0a13c6d6038 342 Gene3D G3DSA:3.40.50.720 1 181 2.6E-77 T 14-10-2018 GYO_3074 aceb1c1a377e314cdb8aa0a13c6d6038 342 Pfam PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain 15 177 1.4E-75 T 14-10-2018 IPR013116 Ketol-acid reductoisomerase, N-terminal KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 GYO_3074 aceb1c1a377e314cdb8aa0a13c6d6038 342 PIRSF PIRSF000116 201 332 1.0E-16 T 14-10-2018 IPR014359 Ketol-acid reductoisomerase, prokaryotic GO:0004455|GO:0009082|GO:0050661|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 GYO_3074 aceb1c1a377e314cdb8aa0a13c6d6038 342 PIRSF PIRSF000116 3 206 9.4E-39 T 14-10-2018 IPR014359 Ketol-acid reductoisomerase, prokaryotic GO:0004455|GO:0009082|GO:0050661|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 GYO_3074 aceb1c1a377e314cdb8aa0a13c6d6038 342 Hamap MF_00435 Ketol-acid reductoisomerase (NADP(+)) [ilvC]. 2 328 44.347 T 14-10-2018 IPR013023 Ketol-acid reductoisomerase GO:0009082|GO:0016491|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 GYO_3074 aceb1c1a377e314cdb8aa0a13c6d6038 342 Pfam PF01450 Acetohydroxy acid isomeroreductase, catalytic domain 183 325 5.6E-66 T 14-10-2018 IPR000506 Ketol-acid reductoisomerase, C-terminal GO:0004455|GO:0009082|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 GYO_3074 aceb1c1a377e314cdb8aa0a13c6d6038 342 SUPERFAMILY SSF48179 183 332 6.12E-71 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 GYO_3074 aceb1c1a377e314cdb8aa0a13c6d6038 342 TIGRFAM TIGR00465 ilvC: ketol-acid reductoisomerase 15 327 7.3E-151 T 14-10-2018 IPR013023 Ketol-acid reductoisomerase GO:0009082|GO:0016491|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 GYO_3074 aceb1c1a377e314cdb8aa0a13c6d6038 342 SUPERFAMILY SSF51735 3 182 9.01E-71 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily GYO_3074 aceb1c1a377e314cdb8aa0a13c6d6038 342 Gene3D G3DSA:1.10.3730.40 182 337 3.8E-70 T 14-10-2018 GYO_2703 789d898b3c3c310621c558ab9b40244a 307 SUPERFAMILY SSF52540 30 260 2.74E-21 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase GYO_2703 789d898b3c3c310621c558ab9b40244a 307 SMART SM00382 135 272 1.6E-11 T 14-10-2018 IPR003593 AAA+ ATPase domain GYO_2703 789d898b3c3c310621c558ab9b40244a 307 TIGRFAM TIGR02858 spore_III_AA: stage III sporulation protein AA 28 293 7.2E-126 T 14-10-2018 IPR014217 Sporulation stage III, protein AA GYO_2703 789d898b3c3c310621c558ab9b40244a 307 Gene3D G3DSA:3.40.50.300 117 274 7.8E-24 T 14-10-2018 GYO_0013 e889ca1a79518c224056164ed0f272bb 488 SMART SM01240 9 474 0.0 T 14-10-2018 GYO_0013 e889ca1a79518c224056164ed0f272bb 488 TIGRFAM TIGR01302 IMP_dehydrog: inosine-5'-monophosphate dehydrogenase 10 456 3.0E-210 T 14-10-2018 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: R-HSA-6798695|Reactome: R-HSA-73817 GYO_0013 e889ca1a79518c224056164ed0f272bb 488 SUPERFAMILY SSF51412 6 478 2.62E-128 T 14-10-2018 GYO_0013 e889ca1a79518c224056164ed0f272bb 488 Pfam PF00571 CBS domain 153 204 3.9E-9 T 14-10-2018 IPR000644 CBS domain GYO_0013 e889ca1a79518c224056164ed0f272bb 488 Pfam PF00571 CBS domain 97 144 6.8E-8 T 14-10-2018 IPR000644 CBS domain GYO_0013 e889ca1a79518c224056164ed0f272bb 488 SMART SM00116 161 209 5.8E-9 T 14-10-2018 IPR000644 CBS domain GYO_0013 e889ca1a79518c224056164ed0f272bb 488 SMART SM00116 98 148 1.5E-8 T 14-10-2018 IPR000644 CBS domain GYO_0013 e889ca1a79518c224056164ed0f272bb 488 Hamap MF_01964 Inosine-5'-monophosphate dehydrogenase [guaB]. 10 487 86.755 T 14-10-2018 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: R-HSA-6798695|Reactome: R-HSA-73817 GYO_0013 e889ca1a79518c224056164ed0f272bb 488 PIRSF PIRSF000130 1 488 1.2E-213 T 14-10-2018 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: R-HSA-6798695|Reactome: R-HSA-73817 GYO_0013 e889ca1a79518c224056164ed0f272bb 488 SUPERFAMILY SSF54631 66 208 2.4E-33 T 14-10-2018 GYO_0013 e889ca1a79518c224056164ed0f272bb 488 Gene3D G3DSA:3.20.20.70 1 487 3.8E-229 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 GYO_0013 e889ca1a79518c224056164ed0f272bb 488 Pfam PF00478 IMP dehydrogenase / GMP reductase domain 10 474 1.7E-169 T 14-10-2018 IPR001093 IMP dehydrogenase/GMP reductase GO:0003824|GO:0055114 GYO_0013 e889ca1a79518c224056164ed0f272bb 488 ProSitePatterns PS00487 IMP dehydrogenase / GMP reductase signature. 298 310 - T 14-10-2018 IPR015875 IMP dehydrogenase / GMP reductase, conserved site GO:0016491|GO:0055114 GYO_2078 233d354bc4d415905585444efcfcbc35 405 PRINTS PR00359 B-class P450 signature 195 217 1.4E-57 T 14-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 GYO_2078 233d354bc4d415905585444efcfcbc35 405 PRINTS PR00359 B-class P450 signature 294 321 1.4E-57 T 14-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 GYO_2078 233d354bc4d415905585444efcfcbc35 405 PRINTS PR00359 B-class P450 signature 352 363 1.4E-57 T 14-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 GYO_2078 233d354bc4d415905585444efcfcbc35 405 PRINTS PR00359 B-class P450 signature 140 156 1.4E-57 T 14-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 GYO_2078 233d354bc4d415905585444efcfcbc35 405 PRINTS PR00359 B-class P450 signature 276 287 1.4E-57 T 14-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 GYO_2078 233d354bc4d415905585444efcfcbc35 405 PRINTS PR00359 B-class P450 signature 343 352 1.4E-57 T 14-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 GYO_2078 233d354bc4d415905585444efcfcbc35 405 PRINTS PR00359 B-class P450 signature 157 172 1.4E-57 T 14-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 GYO_2078 233d354bc4d415905585444efcfcbc35 405 PRINTS PR00359 B-class P450 signature 322 337 1.4E-57 T 14-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 GYO_2078 233d354bc4d415905585444efcfcbc35 405 PRINTS PR00359 B-class P450 signature 94 105 1.4E-57 T 14-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 GYO_2078 233d354bc4d415905585444efcfcbc35 405 Pfam PF00067 Cytochrome P450 83 373 8.1E-26 T 14-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 GYO_2078 233d354bc4d415905585444efcfcbc35 405 SUPERFAMILY SSF48264 7 403 1.57E-94 T 14-10-2018 IPR036396 Cytochrome P450 superfamily GO:0005506|GO:0016705|GO:0020037|GO:0055114 GYO_2078 233d354bc4d415905585444efcfcbc35 405 Gene3D G3DSA:1.10.630.10 2 405 1.2E-136 T 14-10-2018 IPR036396 Cytochrome P450 superfamily GO:0005506|GO:0016705|GO:0020037|GO:0055114 GYO_2078 233d354bc4d415905585444efcfcbc35 405 ProSitePatterns PS00086 Cytochrome P450 cysteine heme-iron ligand signature. 345 354 - T 14-10-2018 IPR017972 Cytochrome P450, conserved site GO:0016705|GO:0055114 GYO_4254 e75e16f84399d18e72356d4b6b4fd5d9 392 PIRSF PIRSF021438 1 387 3.2E-154 T 14-10-2018 IPR023896 D-alanyl-lipoteichoic acid biosynthesis DltD, Firmicutes GYO_4254 e75e16f84399d18e72356d4b6b4fd5d9 392 Pfam PF04914 DltD protein 41 385 8.8E-124 T 14-10-2018 IPR006998 DltD GYO_4254 e75e16f84399d18e72356d4b6b4fd5d9 392 TIGRFAM TIGR04092 LTA_DltD: D-alanyl-lipoteichoic acid biosynthesis protein DltD 6 384 1.5E-139 T 14-10-2018 IPR023896 D-alanyl-lipoteichoic acid biosynthesis DltD, Firmicutes GYO_4254 e75e16f84399d18e72356d4b6b4fd5d9 392 SUPERFAMILY SSF52266 255 384 3.14E-8 T 14-10-2018 GYO_3830 1660089a822dd780d71771fac649398e 391 Gene3D G3DSA:3.30.930.10 1 322 5.2E-101 T 14-10-2018 GYO_3830 1660089a822dd780d71771fac649398e 391 Pfam PF13393 Histidyl-tRNA synthetase 9 317 3.8E-75 T 14-10-2018 GYO_3830 1660089a822dd780d71771fac649398e 391 PIRSF PIRSF001549 1 388 6.7E-78 T 14-10-2018 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit GO:0005737 GYO_3830 1660089a822dd780d71771fac649398e 391 TIGRFAM TIGR00443 hisZ_biosyn_reg: ATP phosphoribosyltransferase, regulatory subunit 11 321 6.4E-96 T 14-10-2018 IPR004517 ATP phosphoribosyltransferase regulatory subunit GO:0000105|GO:0005737 GYO_3830 1660089a822dd780d71771fac649398e 391 Gene3D G3DSA:3.40.50.12590 326 390 2.0E-17 T 14-10-2018 GYO_3830 1660089a822dd780d71771fac649398e 391 Hamap MF_00125 ATP phosphoribosyltransferase regulatory subunit [hisZ]. 16 371 36.824 T 14-10-2018 IPR004517 ATP phosphoribosyltransferase regulatory subunit GO:0000105|GO:0005737 GYO_3830 1660089a822dd780d71771fac649398e 391 SUPERFAMILY SSF55681 4 321 2.49E-62 T 14-10-2018 GYO_0544 fbc64f33483e770544aecc12eaf4bd73 397 Gene3D G3DSA:3.40.50.300 1 229 2.4E-73 T 14-10-2018 GYO_0544 fbc64f33483e770544aecc12eaf4bd73 397 SUPERFAMILY SSF52540 2 306 1.03E-44 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase GYO_0544 fbc64f33483e770544aecc12eaf4bd73 397 SMART SM00833 259 374 9.3E-51 T 14-10-2018 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal GYO_0544 fbc64f33483e770544aecc12eaf4bd73 397 Pfam PF07683 Cobalamin synthesis protein cobW C-terminal domain 259 374 6.9E-28 T 14-10-2018 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal GYO_0544 fbc64f33483e770544aecc12eaf4bd73 397 Pfam PF02492 CobW/HypB/UreG, nucleotide-binding domain 5 210 8.2E-61 T 14-10-2018 IPR003495 CobW/HypB/UreG, nucleotide-binding domain GYO_3266 045d9595070b19e8869ce56069213e1e 253 SUPERFAMILY SSF51735 2 248 3.88E-27 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily GYO_3266 045d9595070b19e8869ce56069213e1e 253 Gene3D G3DSA:3.40.50.720 1 240 3.2E-31 T 14-10-2018 GYO_3266 045d9595070b19e8869ce56069213e1e 253 Pfam PF01370 NAD dependent epimerase/dehydratase family 4 177 5.3E-14 T 14-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 GYO_0052 9a0ed47182f254552be45d856c0b85de 290 Pfam PF05582 YabG peptidase U57 4 286 7.7E-120 T 14-10-2018 IPR008764 Peptidase U57, YabG GYO_0052 9a0ed47182f254552be45d856c0b85de 290 TIGRFAM TIGR02855 spore_yabG: sporulation peptidase YabG 4 287 2.1E-145 T 14-10-2018 IPR008764 Peptidase U57, YabG GYO_0052 9a0ed47182f254552be45d856c0b85de 290 ProDom PD127708 YABG PROTEASE SPORULATION-SPECIFIC PEPTIDASE U57 BH0058 ORTHOLOG SPORE FAMILY B.SUBTILIS 4 283 6.0E-163 T 14-10-2018 IPR008764 Peptidase U57, YabG GYO_0052 9a0ed47182f254552be45d856c0b85de 290 PIRSF PIRSF011575 2 290 1.6E-142 T 14-10-2018 IPR008764 Peptidase U57, YabG GYO_1009 33a81f403f6f7aa384def5ca5ed9152f 146 SUPERFAMILY SSF55729 18 137 2.24E-13 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase GYO_1009 33a81f403f6f7aa384def5ca5ed9152f 146 Gene3D G3DSA:3.40.630.30 2 141 7.2E-12 T 14-10-2018 GYO_1009 33a81f403f6f7aa384def5ca5ed9152f 146 Pfam PF00583 Acetyltransferase (GNAT) family 32 129 1.3E-6 T 14-10-2018 IPR000182 GNAT domain GYO_1782 b11962f859b0dece1b045a7ce999d2df 44 Pfam PF17447 Uncharacterized protein YkpC 29 42 2.7E-7 T 14-10-2018 IPR035379 Uncharacterized protein YkpC GYO_1782 b11962f859b0dece1b045a7ce999d2df 44 ProDom PD049302 YKPC PRECURSOR SIGNAL 1 42 7.0E-5 T 14-10-2018 IPR035379 Uncharacterized protein YkpC GYO_4286 85409ef0cf3ce10b00940232599ccb85 295 Gene3D G3DSA:1.10.10.2840 174 293 4.4E-13 T 14-10-2018 GYO_4286 85409ef0cf3ce10b00940232599ccb85 295 Pfam PF13556 PucR C-terminal helix-turn-helix domain 234 287 2.6E-13 T 14-10-2018 IPR025736 PucR C-terminal helix-turn-helix domain GYO_1837 2ac684fbb751f84a0d239087b6f219ae 297 Pfam PF09678 Cytochrome c oxidase caa3 assembly factor (Caa3_CtaG) 26 278 6.0E-66 T 14-10-2018 IPR019108 Cytochrome c oxidase caa3-type, assembly factor CtaG-related GYO_1837 2ac684fbb751f84a0d239087b6f219ae 297 TIGRFAM TIGR02737 caa3_CtaG: cytochrome c oxidase assembly factor CtaG 3 280 2.7E-138 T 14-10-2018 IPR014108 Cytochrome c oxidase caa3 type assembly factor CtaG GYO_1567 bac3f61489113dc69a606f2b0cd397f0 68 Pfam PF17356 Phage-like element PBSX protein XtrA 1 67 5.6E-24 T 14-10-2018 IPR035530 Phage-like element PBSX protein XtrA GYO_1567 bac3f61489113dc69a606f2b0cd397f0 68 ProDom PD027572 XTRA PBSX RELATED YQAO ELEMENT PHAGE PHAGE-LIKE 8 62 3.0E-23 T 14-10-2018 IPR035530 Phage-like element PBSX protein XtrA GYO_0626 eb2e00f3dceeece67bd077db8537c25d 240 SMART SM00796 5 216 6.2E-104 T 14-10-2018 IPR003833 Carboxyltransferase domain, subdomain C and D GYO_0626 eb2e00f3dceeece67bd077db8537c25d 240 SUPERFAMILY SSF50891 102 232 3.68E-49 T 14-10-2018 IPR029000 Cyclophilin-like domain superfamily GYO_0626 eb2e00f3dceeece67bd077db8537c25d 240 Gene3D G3DSA:2.40.100.10 100 240 1.4E-62 T 14-10-2018 IPR029000 Cyclophilin-like domain superfamily GYO_0626 eb2e00f3dceeece67bd077db8537c25d 240 SUPERFAMILY SSF160467 7 107 8.24E-19 T 14-10-2018 GYO_0626 eb2e00f3dceeece67bd077db8537c25d 240 Pfam PF02682 Carboxyltransferase domain, subdomain C and D 6 216 1.6E-77 T 14-10-2018 IPR003833 Carboxyltransferase domain, subdomain C and D GYO_0626 eb2e00f3dceeece67bd077db8537c25d 240 TIGRFAM TIGR00370 TIGR00370: sensor histidine kinase inhibitor, KipI family 10 225 2.0E-105 T 14-10-2018 IPR010016 KipI family KEGG: 00480+3.5.2.9|MetaCyc: PWY-4041|MetaCyc: PWY-7942 GYO_0626 eb2e00f3dceeece67bd077db8537c25d 240 Gene3D G3DSA:3.30.1360.40 1 99 6.0E-36 T 14-10-2018 GYO_3284 a74cf7667a08f6c047604b6055a0f63d 95 ProDom PD866859 YTVB PLASMID MEMBRANE TRANSMEMBRANE 1 93 4.0E-48 T 14-10-2018 GYO_3284 a74cf7667a08f6c047604b6055a0f63d 95 Pfam PF14074 Protein of unknown function (DUF4257) 1 70 1.3E-29 T 14-10-2018 IPR025353 Protein of unknown function DUF4257) GYO_0162 58bd2341b425ee41688416f972ca1710 431 TIGRFAM TIGR00967 3a0501s007: preprotein translocase, SecY subunit 15 425 8.5E-153 T 14-10-2018 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 GYO_0162 58bd2341b425ee41688416f972ca1710 431 SUPERFAMILY SSF103491 2 420 3.14E-127 T 14-10-2018 IPR023201 SecY domain superfamily Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 GYO_0162 58bd2341b425ee41688416f972ca1710 431 ProSitePatterns PS00756 Protein secY signature 2. 165 182 - T 14-10-2018 IPR030659 SecY conserved site Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 GYO_0162 58bd2341b425ee41688416f972ca1710 431 PRINTS PR00303 Preprotein translocase SecY subunit signature 146 171 1.5E-101 T 14-10-2018 GYO_0162 58bd2341b425ee41688416f972ca1710 431 PRINTS PR00303 Preprotein translocase SecY subunit signature 364 382 1.5E-101 T 14-10-2018 GYO_0162 58bd2341b425ee41688416f972ca1710 431 PRINTS PR00303 Preprotein translocase SecY subunit signature 67 87 1.5E-101 T 14-10-2018 GYO_0162 58bd2341b425ee41688416f972ca1710 431 PRINTS PR00303 Preprotein translocase SecY subunit signature 309 331 1.5E-101 T 14-10-2018 GYO_0162 58bd2341b425ee41688416f972ca1710 431 PRINTS PR00303 Preprotein translocase SecY subunit signature 18 36 1.5E-101 T 14-10-2018 GYO_0162 58bd2341b425ee41688416f972ca1710 431 PRINTS PR00303 Preprotein translocase SecY subunit signature 269 288 1.5E-101 T 14-10-2018 GYO_0162 58bd2341b425ee41688416f972ca1710 431 PRINTS PR00303 Preprotein translocase SecY subunit signature 109 132 1.5E-101 T 14-10-2018 GYO_0162 58bd2341b425ee41688416f972ca1710 431 PRINTS PR00303 Preprotein translocase SecY subunit signature 172 195 1.5E-101 T 14-10-2018 GYO_0162 58bd2341b425ee41688416f972ca1710 431 PRINTS PR00303 Preprotein translocase SecY subunit signature 398 416 1.5E-101 T 14-10-2018 GYO_0162 58bd2341b425ee41688416f972ca1710 431 PIRSF PIRSF004557 1 431 3.1E-124 T 14-10-2018 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 GYO_0162 58bd2341b425ee41688416f972ca1710 431 Gene3D G3DSA:1.10.3370.10 1 425 9.5E-157 T 14-10-2018 IPR023201 SecY domain superfamily Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 GYO_0162 58bd2341b425ee41688416f972ca1710 431 Hamap MF_01465 Protein translocase subunit SecY [secY]. 5 429 29.139 T 14-10-2018 IPR026593 Protein translocase subunit SecY GYO_0162 58bd2341b425ee41688416f972ca1710 431 Pfam PF00344 SecY translocase 68 413 2.2E-111 T 14-10-2018 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 GYO_0162 58bd2341b425ee41688416f972ca1710 431 ProSitePatterns PS00755 Protein secY signature 1. 68 87 - T 14-10-2018 IPR030659 SecY conserved site Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 GYO_1964 44abc74ed03a6f7c53b57f3ef3310fdb 266 Pfam PF02481 DNA recombination-mediator protein A 40 245 2.2E-76 T 14-10-2018 IPR003488 DNA recombination-mediator protein A GO:0009294 GYO_1964 44abc74ed03a6f7c53b57f3ef3310fdb 266 SUPERFAMILY SSF102405 50 255 5.95E-39 T 14-10-2018 GYO_1964 44abc74ed03a6f7c53b57f3ef3310fdb 266 Gene3D G3DSA:3.40.50.450 4 261 1.3E-91 T 14-10-2018 GYO_1964 44abc74ed03a6f7c53b57f3ef3310fdb 266 TIGRFAM TIGR00732 dprA: DNA protecting protein DprA 38 255 4.7E-90 T 14-10-2018 IPR003488 DNA recombination-mediator protein A GO:0009294 GYO_1865 3791cbf527133d65fa0aae0ca07bb87d 324 ProSitePatterns PS01348 MraY family signature 2. 168 179 - T 14-10-2018 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 GYO_1865 3791cbf527133d65fa0aae0ca07bb87d 324 TIGRFAM TIGR00445 mraY: phospho-N-acetylmuramoyl-pentapeptide-transferase 17 323 1.7E-134 T 14-10-2018 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase GO:0008963|GO:0016020 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 GYO_1865 3791cbf527133d65fa0aae0ca07bb87d 324 Pfam PF00953 Glycosyl transferase family 4 82 248 7.8E-39 T 14-10-2018 IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|Reactome: R-HSA-446193|Reactome: R-HSA-4549356 GYO_1865 3791cbf527133d65fa0aae0ca07bb87d 324 Hamap MF_00038 Phospho-N-acetylmuramoyl-pentapeptide-transferase [mraY]. 5 322 24.992 T 14-10-2018 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase GO:0008963|GO:0016020 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 GYO_1865 3791cbf527133d65fa0aae0ca07bb87d 324 ProSitePatterns PS01347 MraY family signature 1. 48 60 - T 14-10-2018 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 GYO_1865 3791cbf527133d65fa0aae0ca07bb87d 324 Pfam PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 48 60 1.4E-5 T 14-10-2018 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 GYO_0645 9aa236b92de00687fb80ce10d1c8cc18 362 Gene3D G3DSA:1.50.10.10 17 356 3.3E-103 T 14-10-2018 IPR012341 Six-hairpin glycosidase-like superfamily GO:0003824 GYO_0645 9aa236b92de00687fb80ce10d1c8cc18 362 Pfam PF01270 Glycosyl hydrolases family 8 51 154 2.3E-5 T 14-10-2018 IPR002037 Glycoside hydrolase, family 8 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 GYO_0645 9aa236b92de00687fb80ce10d1c8cc18 362 SUPERFAMILY SSF48208 29 335 8.16E-47 T 14-10-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 GYO_0473 83abc8f6fdeb2f56ad939a2585dcd9e9 358 SUPERFAMILY SSF103642 4 24 1.57E-7 T 14-10-2018 GYO_0473 83abc8f6fdeb2f56ad939a2585dcd9e9 358 SUPERFAMILY SSF47954 271 347 2.61E-8 T 14-10-2018 IPR036915 Cyclin-like superfamily GYO_0473 83abc8f6fdeb2f56ad939a2585dcd9e9 358 Gene3D G3DSA:3.10.450.50 1 26 1.1E-6 T 14-10-2018 GYO_0473 83abc8f6fdeb2f56ad939a2585dcd9e9 358 Pfam PF02810 SEC-C motif 6 23 1.1E-9 T 14-10-2018 IPR004027 SEC-C motif GYO_0473 83abc8f6fdeb2f56ad939a2585dcd9e9 358 Pfam PF05225 helix-turn-helix, Psq domain 296 346 3.6E-16 T 14-10-2018 IPR007889 DNA binding HTH domain, Psq-type GO:0003677 GYO_4391 129c453b3d4ddff3f9e206b4e27ba188 273 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 82 93 7.2E-12 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR GYO_4391 129c453b3d4ddff3f9e206b4e27ba188 273 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 135 143 7.2E-12 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR GYO_4391 129c453b3d4ddff3f9e206b4e27ba188 273 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 155 174 7.2E-12 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR GYO_4391 129c453b3d4ddff3f9e206b4e27ba188 273 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 13 253 3.1E-73 T 14-10-2018 GYO_4391 129c453b3d4ddff3f9e206b4e27ba188 273 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 176 193 4.5E-47 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR GYO_4391 129c453b3d4ddff3f9e206b4e27ba188 273 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 217 237 4.5E-47 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR GYO_4391 129c453b3d4ddff3f9e206b4e27ba188 273 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 155 174 4.5E-47 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR GYO_4391 129c453b3d4ddff3f9e206b4e27ba188 273 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 82 93 4.5E-47 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR GYO_4391 129c453b3d4ddff3f9e206b4e27ba188 273 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 129 145 4.5E-47 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR GYO_4391 129c453b3d4ddff3f9e206b4e27ba188 273 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 4.5E-47 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR GYO_4391 129c453b3d4ddff3f9e206b4e27ba188 273 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 142 170 - T 14-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 GYO_4391 129c453b3d4ddff3f9e206b4e27ba188 273 SUPERFAMILY SSF51735 5 256 2.72E-85 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily GYO_4391 129c453b3d4ddff3f9e206b4e27ba188 273 Gene3D G3DSA:3.40.50.720 1 267 6.4E-86 T 14-10-2018 GYO_1992 b4010d68bde0841b705cdf401879a9a3 259 TIGRFAM TIGR01400 fliR: flagellar biosynthetic protein FliR 10 253 4.0E-72 T 14-10-2018 IPR006303 Flagellar biosynthesis protein FliR GO:0016021|GO:0044780 GYO_1992 b4010d68bde0841b705cdf401879a9a3 259 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 17 38 3.1E-29 T 14-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 GYO_1992 b4010d68bde0841b705cdf401879a9a3 259 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 200 219 3.1E-29 T 14-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 GYO_1992 b4010d68bde0841b705cdf401879a9a3 259 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 75 94 3.1E-29 T 14-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 GYO_1992 b4010d68bde0841b705cdf401879a9a3 259 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 178 200 3.1E-29 T 14-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 GYO_1992 b4010d68bde0841b705cdf401879a9a3 259 Pfam PF01311 Bacterial export proteins, family 1 9 243 2.2E-73 T 14-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 GYO_3130 9bd3eef378bf6d34deeb13213999640c 496 ProDom PD018364 ISOMERASE L-ARABINOSE ARABINOSE METABOLISM CARBOHYDRATE CATABOLISM ARAA 5 302 1.0E-174 T 14-10-2018 IPR003762 L-arabinose isomerase GO:0008733 KEGG: 00040+5.3.1.4 GYO_3130 9bd3eef378bf6d34deeb13213999640c 496 Pfam PF11762 L-arabinose isomerase C-terminal domain 359 472 8.6E-50 T 14-10-2018 IPR024664 L-arabinose isomerase, C-terminal KEGG: 00040+5.3.1.4 GYO_3130 9bd3eef378bf6d34deeb13213999640c 496 SUPERFAMILY SSF53743 1 324 7.06E-121 T 14-10-2018 IPR009015 L-fucose isomerase, N-terminal/central domain superfamily GO:0005737|GO:0005996|GO:0016861 GYO_3130 9bd3eef378bf6d34deeb13213999640c 496 Gene3D G3DSA:3.40.50.10940 1 174 1.0E-80 T 14-10-2018 IPR038583 L-arabinose isomerase, N-terminal domain superfamily KEGG: 00040+5.3.1.4 GYO_3130 9bd3eef378bf6d34deeb13213999640c 496 SUPERFAMILY SSF50443 326 494 6.28E-72 T 14-10-2018 IPR004216 L-fucose/L-arabinose isomerase, C-terminal GYO_3130 9bd3eef378bf6d34deeb13213999640c 496 Hamap MF_00519 L-arabinose isomerase [araA]. 1 473 64.061 T 14-10-2018 IPR003762 L-arabinose isomerase GO:0008733 KEGG: 00040+5.3.1.4 GYO_3130 9bd3eef378bf6d34deeb13213999640c 496 PIRSF PIRSF001478 1 496 4.2E-257 T 14-10-2018 IPR003762 L-arabinose isomerase GO:0008733 KEGG: 00040+5.3.1.4 GYO_3130 9bd3eef378bf6d34deeb13213999640c 496 Pfam PF02610 L-arabinose isomerase 5 356 4.1E-176 T 14-10-2018 IPR003762 L-arabinose isomerase GO:0008733 KEGG: 00040+5.3.1.4 GYO_0159 cdb8538ffa2daf05b2e9f11d8393a3dc 168 SUPERFAMILY SSF54211 82 161 7.33E-26 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold GYO_0159 cdb8538ffa2daf05b2e9f11d8393a3dc 168 ProSitePatterns PS00585 Ribosomal protein S5 signature. 30 62 - T 14-10-2018 IPR018192 Ribosomal protein S5, N-terminal, conserved site GYO_0159 cdb8538ffa2daf05b2e9f11d8393a3dc 168 Gene3D G3DSA:3.30.230.10 76 168 3.0E-37 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup GYO_0159 cdb8538ffa2daf05b2e9f11d8393a3dc 168 Pfam PF03719 Ribosomal protein S5, C-terminal domain 89 159 2.0E-30 T 14-10-2018 IPR005324 Ribosomal protein S5, C-terminal GO:0003735|GO:0005840|GO:0006412 GYO_0159 cdb8538ffa2daf05b2e9f11d8393a3dc 168 TIGRFAM TIGR01021 rpsE_bact: ribosomal protein uS5 11 165 1.4E-73 T 14-10-2018 IPR005712 Ribosomal protein S5, bacterial-type GO:0003735|GO:0006412|GO:0015935 GYO_0159 cdb8538ffa2daf05b2e9f11d8393a3dc 168 SUPERFAMILY SSF54768 11 78 5.76E-25 T 14-10-2018 GYO_0159 cdb8538ffa2daf05b2e9f11d8393a3dc 168 Gene3D G3DSA:3.30.160.20 3 75 2.8E-35 T 14-10-2018 GYO_0159 cdb8538ffa2daf05b2e9f11d8393a3dc 168 Pfam PF00333 Ribosomal protein S5, N-terminal domain 13 77 2.1E-32 T 14-10-2018 IPR013810 Ribosomal protein S5, N-terminal GO:0003723|GO:0003735|GO:0005840|GO:0006412 GYO_0159 cdb8538ffa2daf05b2e9f11d8393a3dc 168 Hamap MF_01307_B 30S ribosomal protein S5 [rpsE]. 3 165 37.395 T 14-10-2018 IPR005712 Ribosomal protein S5, bacterial-type GO:0003735|GO:0006412|GO:0015935 GYO_3687 aa69f4bef98112c7ca5f47da7d4ee43d 421 SUPERFAMILY SSF55874 259 421 1.01E-29 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily GYO_3687 aa69f4bef98112c7ca5f47da7d4ee43d 421 Gene3D G3DSA:3.30.565.10 263 421 2.5E-27 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily GYO_3687 aa69f4bef98112c7ca5f47da7d4ee43d 421 Pfam PF00512 His Kinase A (phospho-acceptor) domain 203 265 1.0E-10 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 GYO_3687 aa69f4bef98112c7ca5f47da7d4ee43d 421 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 316 421 1.5E-13 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase GYO_3687 aa69f4bef98112c7ca5f47da7d4ee43d 421 SMART SM00388 202 267 1.4E-11 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 GYO_3687 aa69f4bef98112c7ca5f47da7d4ee43d 421 SMART SM00387 312 421 2.4E-20 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase GYO_3687 aa69f4bef98112c7ca5f47da7d4ee43d 421 SUPERFAMILY SSF47384 187 265 9.81E-12 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 GYO_3687 aa69f4bef98112c7ca5f47da7d4ee43d 421 Gene3D G3DSA:1.10.287.130 170 262 3.6E-11 T 14-10-2018 GYO_3687 aa69f4bef98112c7ca5f47da7d4ee43d 421 PRINTS PR01780 Lantibiotic regulatory protein signature 351 367 8.2E-8 T 14-10-2018 IPR008358 Signal transduction histidine kinase/phosphatase, lantibiotic regulatory protein MprB GO:0000155|GO:0000160|GO:0004673|GO:0016020 GYO_3687 aa69f4bef98112c7ca5f47da7d4ee43d 421 PRINTS PR01780 Lantibiotic regulatory protein signature 211 227 8.2E-8 T 14-10-2018 IPR008358 Signal transduction histidine kinase/phosphatase, lantibiotic regulatory protein MprB GO:0000155|GO:0000160|GO:0004673|GO:0016020 GYO_3687 aa69f4bef98112c7ca5f47da7d4ee43d 421 PRINTS PR01780 Lantibiotic regulatory protein signature 174 188 8.2E-8 T 14-10-2018 IPR008358 Signal transduction histidine kinase/phosphatase, lantibiotic regulatory protein MprB GO:0000155|GO:0000160|GO:0004673|GO:0016020 GYO_2182 8a63ab15c3a8a359df6b8d717fb95449 465 TIGRFAM TIGR00835 agcS: amino acid carrier protein 17 432 2.7E-163 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 GYO_2182 8a63ab15c3a8a359df6b8d717fb95449 465 Pfam PF01235 Sodium:alanine symporter family 52 444 4.0E-156 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 GYO_2182 8a63ab15c3a8a359df6b8d717fb95449 465 ProSitePatterns PS00873 Sodium:alanine symporter family signature. 89 104 - T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 GYO_2182 8a63ab15c3a8a359df6b8d717fb95449 465 PRINTS PR00175 Sodium/alanine symporter signature 401 421 2.8E-60 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 GYO_2182 8a63ab15c3a8a359df6b8d717fb95449 465 PRINTS PR00175 Sodium/alanine symporter signature 89 111 2.8E-60 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 GYO_2182 8a63ab15c3a8a359df6b8d717fb95449 465 PRINTS PR00175 Sodium/alanine symporter signature 207 226 2.8E-60 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 GYO_2182 8a63ab15c3a8a359df6b8d717fb95449 465 PRINTS PR00175 Sodium/alanine symporter signature 298 316 2.8E-60 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 GYO_2182 8a63ab15c3a8a359df6b8d717fb95449 465 PRINTS PR00175 Sodium/alanine symporter signature 341 363 2.8E-60 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 GYO_2182 8a63ab15c3a8a359df6b8d717fb95449 465 PRINTS PR00175 Sodium/alanine symporter signature 179 197 2.8E-60 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 GYO_1077 b57c3efb3739e3f139ba28356453324a 398 SUPERFAMILY SSF47005 110 156 1.96E-12 T 14-10-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 GYO_1077 b57c3efb3739e3f139ba28356453324a 398 SUPERFAMILY SSF51230 1 93 2.22E-23 T 14-10-2018 IPR011053 Single hybrid motif GYO_1077 b57c3efb3739e3f139ba28356453324a 398 Gene3D G3DSA:4.10.320.10 110 160 1.4E-18 T 14-10-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 GYO_1077 b57c3efb3739e3f139ba28356453324a 398 Pfam PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 169 397 6.5E-81 T 14-10-2018 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain GO:0016746 Reactome: R-HSA-389661 GYO_1077 b57c3efb3739e3f139ba28356453324a 398 Pfam PF00364 Biotin-requiring enzyme 4 76 4.8E-17 T 14-10-2018 IPR000089 Biotin/lipoyl attachment GYO_1077 b57c3efb3739e3f139ba28356453324a 398 Pfam PF02817 e3 binding domain 117 151 2.0E-14 T 14-10-2018 IPR004167 Peripheral subunit-binding domain GO:0016746 Reactome: R-HSA-389661 GYO_1077 b57c3efb3739e3f139ba28356453324a 398 SUPERFAMILY SSF52777 172 398 3.83E-80 T 14-10-2018 GYO_1077 b57c3efb3739e3f139ba28356453324a 398 Gene3D G3DSA:2.40.50.100 2 99 3.7E-25 T 14-10-2018 GYO_1077 b57c3efb3739e3f139ba28356453324a 398 Gene3D G3DSA:3.30.559.10 161 396 1.4E-84 T 14-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 GYO_1788 a5ef18b3d2aaa62a4f76226c826f831c 577 Pfam PF01979 Amidohydrolase family 66 349 1.8E-39 T 14-10-2018 IPR006680 Amidohydrolase-related GO:0016787 GYO_1788 a5ef18b3d2aaa62a4f76226c826f831c 577 Hamap MF_01518 Adenine deaminase [ade]. 20 575 38.463 T 14-10-2018 IPR006679 Adenine deaminase GO:0000034|GO:0006146 KEGG: 00230+3.5.4.2|MetaCyc: PWY-6610 GYO_1788 a5ef18b3d2aaa62a4f76226c826f831c 577 SUPERFAMILY SSF51556 70 318 4.08E-42 T 14-10-2018 IPR032466 Metal-dependent hydrolase GYO_1788 a5ef18b3d2aaa62a4f76226c826f831c 577 SUPERFAMILY SSF51338 12 350 1.62E-18 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 GYO_1788 a5ef18b3d2aaa62a4f76226c826f831c 577 Gene3D G3DSA:2.30.40.10 13 350 2.2E-123 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 GYO_1788 a5ef18b3d2aaa62a4f76226c826f831c 577 TIGRFAM TIGR01178 ade: adenine deaminase 20 576 9.4E-250 T 14-10-2018 IPR006679 Adenine deaminase GO:0000034|GO:0006146 KEGG: 00230+3.5.4.2|MetaCyc: PWY-6610 GYO_1788 a5ef18b3d2aaa62a4f76226c826f831c 577 Gene3D G3DSA:3.20.20.140 70 313 2.2E-123 T 14-10-2018 GYO_1788 a5ef18b3d2aaa62a4f76226c826f831c 577 Pfam PF13382 Adenine deaminase C-terminal domain 405 572 6.5E-60 T 14-10-2018 IPR026912 Adenine deaminase C-terminal domain KEGG: 00230+3.5.4.2|MetaCyc: PWY-6610 GYO_0692 85d52b619f71c247c95625e5ae2e8e06 109 Pfam PF01740 STAS domain 5 99 4.9E-17 T 14-10-2018 IPR002645 STAS domain GYO_0692 85d52b619f71c247c95625e5ae2e8e06 109 SUPERFAMILY SSF52091 4 101 2.35E-23 T 14-10-2018 IPR036513 STAS domain superfamily GYO_0692 85d52b619f71c247c95625e5ae2e8e06 109 Gene3D G3DSA:3.30.750.24 2 109 1.8E-23 T 14-10-2018 IPR036513 STAS domain superfamily GYO_0692 85d52b619f71c247c95625e5ae2e8e06 109 TIGRFAM TIGR00377 ant_ant_sig: anti-anti-sigma factor 1 105 5.2E-34 T 14-10-2018 IPR003658 Anti-sigma factor antagonist GO:0006355|GO:0045152 GYO_1925 d44b6429757d54ca34db0657ee927fbe 447 Pfam PF01189 16S rRNA methyltransferase RsmB/F 245 443 1.8E-58 T 14-10-2018 IPR001678 SAM-dependent methyltransferase RsmB/NOP2-type GO:0008168 GYO_1925 d44b6429757d54ca34db0657ee927fbe 447 Gene3D G3DSA:1.10.940.10 1 141 4.4E-41 T 14-10-2018 IPR035926 NusB-like superfamily GYO_1925 d44b6429757d54ca34db0657ee927fbe 447 SUPERFAMILY SSF48013 5 154 4.06E-37 T 14-10-2018 IPR035926 NusB-like superfamily GYO_1925 d44b6429757d54ca34db0657ee927fbe 447 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 256 266 1.9E-29 T 14-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase GYO_1925 d44b6429757d54ca34db0657ee927fbe 447 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 227 241 1.9E-29 T 14-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase GYO_1925 d44b6429757d54ca34db0657ee927fbe 447 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 428 445 1.9E-29 T 14-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase GYO_1925 d44b6429757d54ca34db0657ee927fbe 447 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 324 336 1.9E-29 T 14-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase GYO_1925 d44b6429757d54ca34db0657ee927fbe 447 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 374 390 1.9E-29 T 14-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase GYO_1925 d44b6429757d54ca34db0657ee927fbe 447 TIGRFAM TIGR00563 rsmB: 16S rRNA (cytosine(967)-C(5))-methyltransferase 7 447 6.8E-207 T 14-10-2018 IPR004573 rRNA small subunit methyltransferase B GO:0006364|GO:0008649 GYO_1925 d44b6429757d54ca34db0657ee927fbe 447 Pfam PF01029 NusB family 5 128 1.3E-31 T 14-10-2018 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 GYO_1925 d44b6429757d54ca34db0657ee927fbe 447 Gene3D G3DSA:3.40.50.150 145 445 7.8E-85 T 14-10-2018 GYO_1925 d44b6429757d54ca34db0657ee927fbe 447 SUPERFAMILY SSF53335 138 446 1.28E-77 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase GYO_1925 d44b6429757d54ca34db0657ee927fbe 447 ProSitePatterns PS01153 NOL1/NOP2/sun family signature. 323 334 - T 14-10-2018 IPR018314 Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p, conserved site GO:0003723|GO:0008168 GYO_1095 18e3d5db148faf61154b9f732195e5aa 313 Pfam PF07582 AP endonuclease family 2 C terminus 269 310 4.7E-10 T 14-10-2018 IPR011418 AP endonuclease, family 2, C-terminal GYO_1095 18e3d5db148faf61154b9f732195e5aa 313 Gene3D G3DSA:3.20.20.150 1 311 2.4E-64 T 14-10-2018 GYO_1095 18e3d5db148faf61154b9f732195e5aa 313 Pfam PF01261 Xylose isomerase-like TIM barrel 19 263 1.2E-33 T 14-10-2018 IPR013022 Xylose isomerase-like, TIM barrel domain GYO_1095 18e3d5db148faf61154b9f732195e5aa 313 SUPERFAMILY SSF51658 1 309 3.59E-44 T 14-10-2018 IPR036237 Xylose isomerase-like superfamily GYO_1003 80b33f56c85712613a369895de685980 396 SUPERFAMILY SSF103473 16 392 6.15E-55 T 14-10-2018 IPR036259 MFS transporter superfamily GYO_1003 80b33f56c85712613a369895de685980 396 Pfam PF07690 Major Facilitator Superfamily 24 240 1.7E-26 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 GYO_1003 80b33f56c85712613a369895de685980 396 Pfam PF07690 Major Facilitator Superfamily 242 384 4.6E-11 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 GYO_1003 80b33f56c85712613a369895de685980 396 Gene3D G3DSA:1.20.1250.20 14 388 4.6E-52 T 14-10-2018 GYO_1003 80b33f56c85712613a369895de685980 396 PRINTS PR01035 Tetracycline resistance protein signature 171 191 7.8E-12 T 14-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 GYO_1003 80b33f56c85712613a369895de685980 396 PRINTS PR01035 Tetracycline resistance protein signature 143 165 7.8E-12 T 14-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 GYO_1003 80b33f56c85712613a369895de685980 396 PRINTS PR01035 Tetracycline resistance protein signature 29 45 7.8E-12 T 14-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 GYO_2587 10bd1babdec89d5d10ec98cc9ec31920 75 Pfam PF14004 Protein of unknown function (DUF4227) 6 75 6.4E-34 T 14-10-2018 IPR025321 Protein of unknown function DUF4227 GYO_0319 3fac5236bd0b02fd56b4cdb9b529e791 219 SMART SM00257 160 218 1.0E-8 T 14-10-2018 IPR018392 LysM domain GYO_0319 3fac5236bd0b02fd56b4cdb9b529e791 219 SUPERFAMILY SSF54106 159 218 6.28E-7 T 14-10-2018 GYO_0319 3fac5236bd0b02fd56b4cdb9b529e791 219 Gene3D G3DSA:3.10.350.10 159 217 4.6E-13 T 14-10-2018 IPR036779 LysM domain superfamily GYO_0319 3fac5236bd0b02fd56b4cdb9b529e791 219 Pfam PF01476 LysM domain 161 218 2.8E-19 T 14-10-2018 IPR018392 LysM domain GYO_0240 3fac5236bd0b02fd56b4cdb9b529e791 219 SMART SM00257 160 218 1.0E-8 T 14-10-2018 IPR018392 LysM domain GYO_0240 3fac5236bd0b02fd56b4cdb9b529e791 219 SUPERFAMILY SSF54106 159 218 6.28E-7 T 14-10-2018 GYO_0240 3fac5236bd0b02fd56b4cdb9b529e791 219 Gene3D G3DSA:3.10.350.10 159 217 4.6E-13 T 14-10-2018 IPR036779 LysM domain superfamily GYO_0240 3fac5236bd0b02fd56b4cdb9b529e791 219 Pfam PF01476 LysM domain 161 218 2.8E-19 T 14-10-2018 IPR018392 LysM domain GYO_4141 d06faccbd224b873b8cba8d449ef0101 638 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 325 529 1.3E-39 T 14-10-2018 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 GYO_4141 d06faccbd224b873b8cba8d449ef0101 638 Hamap MF_00184 Threonine--tRNA ligase [thrS]. 69 635 35.542 T 14-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 GYO_4141 d06faccbd224b873b8cba8d449ef0101 638 Gene3D G3DSA:3.10.20.30 2 65 2.7E-24 T 14-10-2018 IPR012675 Beta-grasp domain superfamily GYO_4141 d06faccbd224b873b8cba8d449ef0101 638 SUPERFAMILY SSF55681 245 527 1.99E-93 T 14-10-2018 GYO_4141 d06faccbd224b873b8cba8d449ef0101 638 Pfam PF03129 Anticodon binding domain 542 631 1.7E-21 T 14-10-2018 IPR004154 Anticodon-binding GYO_4141 d06faccbd224b873b8cba8d449ef0101 638 SMART SM00863 172 221 2.0E-23 T 14-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 GYO_4141 d06faccbd224b873b8cba8d449ef0101 638 Gene3D G3DSA:3.30.930.10 224 532 2.5E-131 T 14-10-2018 GYO_4141 d06faccbd224b873b8cba8d449ef0101 638 Gene3D G3DSA:3.30.980.10 72 223 1.3E-64 T 14-10-2018 GYO_4141 d06faccbd224b873b8cba8d449ef0101 638 Gene3D G3DSA:3.40.50.800 533 638 2.9E-30 T 14-10-2018 IPR036621 Anticodon-binding domain superfamily GYO_4141 d06faccbd224b873b8cba8d449ef0101 638 Pfam PF07973 Threonyl and Alanyl tRNA synthetase second additional domain 172 220 2.6E-15 T 14-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 GYO_4141 d06faccbd224b873b8cba8d449ef0101 638 Gene3D G3DSA:3.30.54.20 133 189 1.3E-64 T 14-10-2018 GYO_4141 d06faccbd224b873b8cba8d449ef0101 638 SUPERFAMILY SSF52954 530 635 1.13E-29 T 14-10-2018 GYO_4141 d06faccbd224b873b8cba8d449ef0101 638 SUPERFAMILY SSF81271 5 64 1.37E-15 T 14-10-2018 IPR012676 TGS-like KEGG: 00970+6.1.1.3 GYO_4141 d06faccbd224b873b8cba8d449ef0101 638 Pfam PF02824 TGS domain 5 64 8.5E-16 T 14-10-2018 IPR004095 TGS KEGG: 00970+6.1.1.3 GYO_4141 d06faccbd224b873b8cba8d449ef0101 638 PRINTS PR01047 Threonyl-tRNA synthetase signature 331 359 2.2E-53 T 14-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 GYO_4141 d06faccbd224b873b8cba8d449ef0101 638 PRINTS PR01047 Threonyl-tRNA synthetase signature 465 493 2.2E-53 T 14-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 GYO_4141 d06faccbd224b873b8cba8d449ef0101 638 PRINTS PR01047 Threonyl-tRNA synthetase signature 535 547 2.2E-53 T 14-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 GYO_4141 d06faccbd224b873b8cba8d449ef0101 638 PRINTS PR01047 Threonyl-tRNA synthetase signature 508 521 2.2E-53 T 14-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 GYO_4141 d06faccbd224b873b8cba8d449ef0101 638 PRINTS PR01047 Threonyl-tRNA synthetase signature 364 387 2.2E-53 T 14-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 GYO_4141 d06faccbd224b873b8cba8d449ef0101 638 TIGRFAM TIGR00418 thrS: threonine--tRNA ligase 75 632 5.6E-245 T 14-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 GYO_4141 d06faccbd224b873b8cba8d449ef0101 638 SUPERFAMILY SSF55186 66 243 3.79E-66 T 14-10-2018 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily GO:0000166 GYO_1399 1aa9bc1cf7d318df49ed45226720f6aa 262 Hamap MF_00063 Phosphoadenosine phosphosulfate reductase [cysH]. 30 261 42.09 T 14-10-2018 IPR004511 Phosphoadenosine phosphosulphate/adenosine 5'-phosphosulphate reductase GO:0004604|GO:0019379|GO:0055114 KEGG: 00920+1.8.4.8 GYO_1399 1aa9bc1cf7d318df49ed45226720f6aa 262 TIGRFAM TIGR02055 APS_reductase: adenylylsulfate reductase, thioredoxin dependent 71 259 1.8E-75 T 14-10-2018 IPR011798 Adenosine 5'-phosphosulphate reductase GO:0004604|GO:0019344|GO:0055114 KEGG: 00920+1.8.4.8 GYO_1399 1aa9bc1cf7d318df49ed45226720f6aa 262 Gene3D G3DSA:3.40.50.620 25 262 5.2E-78 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold GYO_1399 1aa9bc1cf7d318df49ed45226720f6aa 262 TIGRFAM TIGR00434 cysH: phosophoadenylyl-sulfate reductase 53 261 1.3E-102 T 14-10-2018 IPR004511 Phosphoadenosine phosphosulphate/adenosine 5'-phosphosulphate reductase GO:0004604|GO:0019379|GO:0055114 KEGG: 00920+1.8.4.8 GYO_1399 1aa9bc1cf7d318df49ed45226720f6aa 262 PIRSF PIRSF000857 13 262 9.5E-90 T 14-10-2018 IPR004511 Phosphoadenosine phosphosulphate/adenosine 5'-phosphosulphate reductase GO:0004604|GO:0019379|GO:0055114 KEGG: 00920+1.8.4.8 GYO_1399 1aa9bc1cf7d318df49ed45226720f6aa 262 Pfam PF01507 Phosphoadenosine phosphosulfate reductase family 65 237 6.0E-55 T 14-10-2018 IPR002500 Phosphoadenosine phosphosulphate reductase GO:0003824 Reactome: R-HSA-196843 GYO_1399 1aa9bc1cf7d318df49ed45226720f6aa 262 SUPERFAMILY SSF52402 48 224 1.35E-53 T 14-10-2018 GYO_1879 83e265463a3c70866fcfff00a2988a05 239 Pfam PF04542 Sigma-70 region 2 62 131 1.8E-18 T 14-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 GYO_1879 83e265463a3c70866fcfff00a2988a05 239 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 86 99 - T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 GYO_1879 83e265463a3c70866fcfff00a2988a05 239 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 205 231 - T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 GYO_1879 83e265463a3c70866fcfff00a2988a05 239 Gene3D G3DSA:1.10.10.10 167 239 7.8E-14 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily GYO_1879 83e265463a3c70866fcfff00a2988a05 239 TIGRFAM TIGR02835 spore_sigmaE: RNA polymerase sigma-E factor 8 239 8.1E-134 T 14-10-2018 IPR014200 RNA polymerase sigma-E type GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 GYO_1879 83e265463a3c70866fcfff00a2988a05 239 PIRSF PIRSF000770 1 239 7.1E-82 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 GYO_1879 83e265463a3c70866fcfff00a2988a05 239 Pfam PF04545 Sigma-70, region 4 180 233 3.9E-17 T 14-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 GYO_1879 83e265463a3c70866fcfff00a2988a05 239 Gene3D G3DSA:1.20.120.1810 29 131 2.6E-25 T 14-10-2018 GYO_1879 83e265463a3c70866fcfff00a2988a05 239 PRINTS PR00046 Major sigma-70 factor signature 205 220 6.5E-12 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 GYO_1879 83e265463a3c70866fcfff00a2988a05 239 PRINTS PR00046 Major sigma-70 factor signature 86 99 6.5E-12 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 GYO_1879 83e265463a3c70866fcfff00a2988a05 239 PRINTS PR00046 Major sigma-70 factor signature 184 196 6.5E-12 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 GYO_1879 83e265463a3c70866fcfff00a2988a05 239 PRINTS PR00046 Major sigma-70 factor signature 220 231 6.5E-12 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 GYO_1879 83e265463a3c70866fcfff00a2988a05 239 SUPERFAMILY SSF88659 143 237 3.36E-22 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like GYO_1879 83e265463a3c70866fcfff00a2988a05 239 SUPERFAMILY SSF88946 25 131 1.96E-35 T 14-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 GYO_1879 83e265463a3c70866fcfff00a2988a05 239 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 58 234 4.0E-36 T 14-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 GYO_4133 b1cf26f49a00e8cdbf81cd8fb684b4a3 290 SUPERFAMILY SSF52768 15 288 7.74E-87 T 14-10-2018 IPR023696 Ureohydrolase domain superfamily GYO_4133 b1cf26f49a00e8cdbf81cd8fb684b4a3 290 PIRSF PIRSF036979 1 290 1.2E-96 T 14-10-2018 IPR006035 Ureohydrolase GO:0046872 GYO_4133 b1cf26f49a00e8cdbf81cd8fb684b4a3 290 Gene3D G3DSA:3.40.800.10 17 290 3.1E-96 T 14-10-2018 GYO_4133 b1cf26f49a00e8cdbf81cd8fb684b4a3 290 ProSitePatterns PS01053 Arginase family signature. 214 235 - T 14-10-2018 IPR020855 Ureohydrolase, manganese-binding site GO:0016813|GO:0046872 GYO_4133 b1cf26f49a00e8cdbf81cd8fb684b4a3 290 Pfam PF00491 Arginase family 22 285 2.9E-80 T 14-10-2018 IPR006035 Ureohydrolase GO:0046872 GYO_4133 b1cf26f49a00e8cdbf81cd8fb684b4a3 290 TIGRFAM TIGR01230 agmatinase: agmatinase 10 286 5.9E-126 T 14-10-2018 IPR005925 Agmatinase-related KEGG: 00330+3.5.3.11|MetaCyc: PWY-40|MetaCyc: PWY-6305|Reactome: R-HSA-351143 GYO_0164 faca2c97fe1fb744708f9b472983908c 248 PRINTS PR00599 Methionine aminopeptidase-1 signature 159 171 2.0E-24 T 14-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 GYO_0164 faca2c97fe1fb744708f9b472983908c 248 PRINTS PR00599 Methionine aminopeptidase-1 signature 190 202 2.0E-24 T 14-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 GYO_0164 faca2c97fe1fb744708f9b472983908c 248 PRINTS PR00599 Methionine aminopeptidase-1 signature 67 80 2.0E-24 T 14-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 GYO_0164 faca2c97fe1fb744708f9b472983908c 248 PRINTS PR00599 Methionine aminopeptidase-1 signature 89 105 2.0E-24 T 14-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 GYO_0164 faca2c97fe1fb744708f9b472983908c 248 ProSitePatterns PS00680 Methionine aminopeptidase subfamily 1 signature. 165 183 - T 14-10-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 GYO_0164 faca2c97fe1fb744708f9b472983908c 248 Pfam PF00557 Metallopeptidase family M24 13 239 1.1E-56 T 14-10-2018 IPR000994 Peptidase M24 GYO_0164 faca2c97fe1fb744708f9b472983908c 248 TIGRFAM TIGR00500 met_pdase_I: methionine aminopeptidase, type I 3 247 1.6E-104 T 14-10-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 GYO_0164 faca2c97fe1fb744708f9b472983908c 248 Hamap MF_01974 Methionine aminopeptidase [map]. 2 248 43.307 T 14-10-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 GYO_0164 faca2c97fe1fb744708f9b472983908c 248 SUPERFAMILY SSF55920 1 247 2.75E-90 T 14-10-2018 IPR036005 Creatinase/aminopeptidase-like GYO_0164 faca2c97fe1fb744708f9b472983908c 248 Gene3D G3DSA:3.90.230.10 1 248 3.0E-108 T 14-10-2018 GYO_2191 5ae3b4f21d990d8fee44ffc67b425113 300 Pfam PF00682 HMGL-like 6 279 7.6E-49 T 14-10-2018 IPR000891 Pyruvate carboxyltransferase GO:0003824 GYO_2191 5ae3b4f21d990d8fee44ffc67b425113 300 Gene3D G3DSA:3.20.20.70 1 300 3.0E-132 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 GYO_2191 5ae3b4f21d990d8fee44ffc67b425113 300 SUPERFAMILY SSF51569 1 296 3.52E-72 T 14-10-2018 GYO_1448 8fda9dad0d18af25b281ccd73eb9a467 311 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 112 303 4.5E-42 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 GYO_1448 8fda9dad0d18af25b281ccd73eb9a467 311 SUPERFAMILY SSF161098 88 291 6.7E-19 T 14-10-2018 IPR035906 MetI-like superfamily GYO_1448 8fda9dad0d18af25b281ccd73eb9a467 311 Gene3D G3DSA:1.10.3720.10 84 300 4.2E-21 T 14-10-2018 IPR035906 MetI-like superfamily GYO_3612 e01a6c873ddb6be38bcbdb396b3b1684 365 TIGRFAM TIGR00912 2A0309: spore germination protein (amino acid permease) 9 363 3.3E-115 T 14-10-2018 IPR004761 Spore germination GerAB GO:0009847|GO:0016021 GYO_3612 e01a6c873ddb6be38bcbdb396b3b1684 365 Pfam PF03845 Spore germination protein 9 331 1.1E-107 T 14-10-2018 IPR004761 Spore germination GerAB GO:0009847|GO:0016021 GYO_3612 e01a6c873ddb6be38bcbdb396b3b1684 365 Gene3D G3DSA:1.20.1740.10 7 363 2.0E-9 T 14-10-2018 GYO_0709 38239ae84f457df0f65c11678a778f9b 91 Gene3D G3DSA:3.30.1340.10 1 87 5.9E-23 T 14-10-2018 IPR035895 HPr-like superfamily GYO_0709 38239ae84f457df0f65c11678a778f9b 91 TIGRFAM TIGR01003 PTS_HPr_family: phosphocarrier, HPr family 1 83 9.6E-18 T 14-10-2018 IPR000032 Phosphocarrier protein HPr-like GYO_0709 38239ae84f457df0f65c11678a778f9b 91 PRINTS PR00107 Phosphocarrier protein signature 12 28 1.8E-6 T 14-10-2018 IPR000032 Phosphocarrier protein HPr-like GYO_0709 38239ae84f457df0f65c11678a778f9b 91 PRINTS PR00107 Phosphocarrier protein signature 41 56 1.8E-6 T 14-10-2018 IPR000032 Phosphocarrier protein HPr-like GYO_0709 38239ae84f457df0f65c11678a778f9b 91 PRINTS PR00107 Phosphocarrier protein signature 56 73 1.8E-6 T 14-10-2018 IPR000032 Phosphocarrier protein HPr-like GYO_0709 38239ae84f457df0f65c11678a778f9b 91 SUPERFAMILY SSF55594 1 84 2.62E-15 T 14-10-2018 IPR035895 HPr-like superfamily GYO_0709 38239ae84f457df0f65c11678a778f9b 91 Pfam PF00381 PTS HPr component phosphorylation site 3 82 1.3E-14 T 14-10-2018 IPR000032 Phosphocarrier protein HPr-like GYO_4261 580250be2abdbbbd78f8cc88697f419f 641 Gene3D G3DSA:3.40.50.2300 407 493 1.8E-9 T 14-10-2018 GYO_4261 580250be2abdbbbd78f8cc88697f419f 641 SUPERFAMILY SSF63520 297 400 2.09E-22 T 14-10-2018 IPR036634 PRD domain superfamily GO:0006355 GYO_4261 580250be2abdbbbd78f8cc88697f419f 641 SUPERFAMILY SSF46785 2 64 2.09E-6 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily GYO_4261 580250be2abdbbbd78f8cc88697f419f 641 Gene3D G3DSA:1.10.1790.10 186 283 6.2E-13 T 14-10-2018 GYO_4261 580250be2abdbbbd78f8cc88697f419f 641 Gene3D G3DSA:1.10.1790.10 298 398 3.1E-22 T 14-10-2018 GYO_4261 580250be2abdbbbd78f8cc88697f419f 641 Gene3D G3DSA:1.10.10.10 3 148 5.7E-14 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily GYO_4261 580250be2abdbbbd78f8cc88697f419f 641 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 500 637 1.1E-32 T 14-10-2018 IPR002178 PTS EIIA type-2 domain GYO_4261 580250be2abdbbbd78f8cc88697f419f 641 Pfam PF05043 Mga helix-turn-helix domain 70 166 2.7E-16 T 14-10-2018 IPR007737 Mga helix-turn-helix domain GYO_4261 580250be2abdbbbd78f8cc88697f419f 641 Gene3D G3DSA:3.40.930.10 497 638 7.5E-30 T 14-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 GYO_4261 580250be2abdbbbd78f8cc88697f419f 641 SUPERFAMILY SSF52794 407 486 3.09E-6 T 14-10-2018 IPR036095 PTS system IIB component-like superfamily GO:0008982|GO:0009401 GYO_4261 580250be2abdbbbd78f8cc88697f419f 641 Pfam PF08279 HTH domain 5 63 6.0E-15 T 14-10-2018 IPR013196 Helix-turn-helix, type 11 GYO_4261 580250be2abdbbbd78f8cc88697f419f 641 SUPERFAMILY SSF63520 184 281 1.96E-18 T 14-10-2018 IPR036634 PRD domain superfamily GO:0006355 GYO_4261 580250be2abdbbbd78f8cc88697f419f 641 Pfam PF00874 PRD domain 308 396 4.2E-20 T 14-10-2018 IPR011608 PRD domain GO:0006355 GYO_4261 580250be2abdbbbd78f8cc88697f419f 641 Pfam PF00874 PRD domain 205 281 6.3E-15 T 14-10-2018 IPR011608 PRD domain GO:0006355 GYO_4261 580250be2abdbbbd78f8cc88697f419f 641 SUPERFAMILY SSF55804 499 637 4.06E-32 T 14-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 GYO_1191 3997a68fba94ef10d94a505318a7b0bb 176 SUPERFAMILY SSF52218 1 169 2.36E-44 T 14-10-2018 IPR029039 Flavoprotein-like superfamily GYO_1191 3997a68fba94ef10d94a505318a7b0bb 176 Pfam PF03358 NADPH-dependent FMN reductase 43 121 1.8E-12 T 14-10-2018 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 GYO_1191 3997a68fba94ef10d94a505318a7b0bb 176 Gene3D G3DSA:3.40.50.360 1 174 6.3E-48 T 14-10-2018 IPR029039 Flavoprotein-like superfamily GYO_3404 64071b3c9657b770988885ecdb6d17fb 258 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 38 56 4.9E-10 T 14-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 GYO_3404 64071b3c9657b770988885ecdb6d17fb 258 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 24 38 4.9E-10 T 14-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 GYO_3404 64071b3c9657b770988885ecdb6d17fb 258 SUPERFAMILY SSF100950 74 234 5.44E-35 T 14-10-2018 IPR037171 NagB/RpiA transferase-like GYO_3404 64071b3c9657b770988885ecdb6d17fb 258 SMART SM00420 6 58 5.3E-25 T 14-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 GYO_3404 64071b3c9657b770988885ecdb6d17fb 258 Gene3D G3DSA:1.10.10.10 1 55 3.0E-6 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily GYO_3404 64071b3c9657b770988885ecdb6d17fb 258 SMART SM01134 73 233 6.8E-68 T 14-10-2018 GYO_3404 64071b3c9657b770988885ecdb6d17fb 258 Pfam PF08220 DeoR-like helix-turn-helix domain 6 62 2.0E-17 T 14-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 GYO_3404 64071b3c9657b770988885ecdb6d17fb 258 SUPERFAMILY SSF46785 5 62 2.28E-12 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily GYO_3404 64071b3c9657b770988885ecdb6d17fb 258 ProSitePatterns PS00894 DeoR-type HTH domain signature. 6 40 - T 14-10-2018 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 GYO_3404 64071b3c9657b770988885ecdb6d17fb 258 Pfam PF00455 DeoR C terminal sensor domain 75 232 2.1E-53 T 14-10-2018 IPR014036 DeoR C-terminal sensor domain GYO_3840 07e9a58f38362e707a4a39c79712047b 243 SMART SM00866 95 234 4.2E-41 T 14-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 GYO_3840 07e9a58f38362e707a4a39c79712047b 243 Gene3D G3DSA:3.40.1410.10 79 243 3.0E-52 T 14-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily GYO_3840 07e9a58f38362e707a4a39c79712047b 243 Pfam PF00392 Bacterial regulatory proteins, gntR family 12 74 1.7E-21 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 GYO_3840 07e9a58f38362e707a4a39c79712047b 243 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 34 48 1.3E-11 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 GYO_3840 07e9a58f38362e707a4a39c79712047b 243 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 48 64 1.3E-11 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 GYO_3840 07e9a58f38362e707a4a39c79712047b 243 Pfam PF07702 UTRA domain 95 233 1.0E-38 T 14-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 GYO_3840 07e9a58f38362e707a4a39c79712047b 243 SMART SM00345 15 74 1.2E-22 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 GYO_3840 07e9a58f38362e707a4a39c79712047b 243 Gene3D G3DSA:1.10.10.10 9 78 4.2E-32 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily GYO_3840 07e9a58f38362e707a4a39c79712047b 243 SUPERFAMILY SSF64288 62 240 5.02E-52 T 14-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily GYO_3840 07e9a58f38362e707a4a39c79712047b 243 SUPERFAMILY SSF46785 4 84 3.06E-25 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily GYO_1867 77fdff89745b78ead69ac136ee73127b 366 TIGRFAM TIGR02615 spoVE: stage V sporulation protein E 9 362 2.8E-190 T 14-10-2018 IPR013438 Sporulation stage V, protein E GYO_1867 77fdff89745b78ead69ac136ee73127b 366 ProSitePatterns PS00428 Cell cycle proteins ftsW / rodA / spoVE signature. 322 346 - T 14-10-2018 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site GO:0016021 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 GYO_1867 77fdff89745b78ead69ac136ee73127b 366 Pfam PF01098 Cell cycle protein 12 365 7.0E-133 T 14-10-2018 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA GO:0016021|GO:0051301 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 GYO_1867 77fdff89745b78ead69ac136ee73127b 366 TIGRFAM TIGR02614 ftsW: cell division protein FtsW 9 363 1.1E-132 T 14-10-2018 IPR013437 Probable peptidoglycan glycosyltransferase FtsW GO:0009252|GO:0016021|GO:0051301 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 GYO_0923 38dbe3462abb414121d19805149363a2 739 Pfam PF13361 UvrD-like helicase C-terminal domain 280 621 1.3E-73 T 14-10-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 GYO_0923 38dbe3462abb414121d19805149363a2 739 Gene3D G3DSA:3.40.50.300 12 277 4.4E-110 T 14-10-2018 GYO_0923 38dbe3462abb414121d19805149363a2 739 Pfam PF00580 UvrD/REP helicase N-terminal domain 12 275 1.0E-82 T 14-10-2018 IPR034739 UvrD/AddA helicase, N-terminal GO:0005524 GYO_0923 38dbe3462abb414121d19805149363a2 739 Gene3D G3DSA:1.10.10.160 116 190 4.4E-110 T 14-10-2018 IPR013986 DExx box DNA helicase domain superfamily GYO_0923 38dbe3462abb414121d19805149363a2 739 TIGRFAM TIGR01073 pcrA: ATP-dependent DNA helicase PcrA 8 737 0.0 T 14-10-2018 IPR005751 ATP-dependent DNA helicase PcrA GO:0004003|GO:0005737|GO:0006268 GYO_0923 38dbe3462abb414121d19805149363a2 739 Gene3D G3DSA:1.10.486.10 386 552 4.6E-133 T 14-10-2018 GYO_0923 38dbe3462abb414121d19805149363a2 739 SUPERFAMILY SSF52540 3 648 5.6E-186 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase GYO_0923 38dbe3462abb414121d19805149363a2 739 Gene3D G3DSA:3.40.50.300 283 639 4.6E-133 T 14-10-2018 GYO_2378 87910a7e20edc240741fc63379799032 275 Pfam PF00583 Acetyltransferase (GNAT) family 149 232 1.8E-8 T 14-10-2018 IPR000182 GNAT domain GYO_2378 87910a7e20edc240741fc63379799032 275 Gene3D G3DSA:3.40.630.30 117 274 4.4E-13 T 14-10-2018 GYO_2378 87910a7e20edc240741fc63379799032 275 SUPERFAMILY SSF55729 126 274 1.08E-16 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase GYO_2378 87910a7e20edc240741fc63379799032 275 TIGRFAM TIGR03827 GNAT_ablB: putative beta-lysine N-acetyltransferase 12 275 1.2E-100 T 14-10-2018 IPR022525 Beta-lysine N-acetyltransferase GO:0016407 GYO_0543 d20e3563d8a29781e853b28b6c86e93b 390 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 184 202 3.8E-5 T 14-10-2018 GYO_0543 d20e3563d8a29781e853b28b6c86e93b 390 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 4 23 3.8E-5 T 14-10-2018 GYO_0543 d20e3563d8a29781e853b28b6c86e93b 390 SUPERFAMILY SSF51905 1 243 3.05E-21 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily GYO_0543 d20e3563d8a29781e853b28b6c86e93b 390 SUPERFAMILY SSF51905 184 386 4.8E-11 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily GYO_0543 d20e3563d8a29781e853b28b6c86e93b 390 Gene3D G3DSA:3.50.50.60 1 379 1.4E-22 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily GYO_0543 d20e3563d8a29781e853b28b6c86e93b 390 Pfam PF13434 L-lysine 6-monooxygenase (NADPH-requiring) 4 316 8.7E-18 T 14-10-2018 IPR025700 L-lysine 6-monooxygenase/L-ornithine 5-monooxygenase GYO_3301 ad71e2b54d67ac06b67f9c4be3227d1a 194 SUPERFAMILY SSF53335 7 152 8.6E-22 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase GYO_3301 ad71e2b54d67ac06b67f9c4be3227d1a 194 Gene3D G3DSA:3.40.50.150 1 194 2.6E-75 T 14-10-2018 GYO_3301 ad71e2b54d67ac06b67f9c4be3227d1a 194 Pfam PF06962 Putative rRNA methylase 48 187 7.6E-50 T 14-10-2018 IPR010719 Putative rRNA methylase GYO_4134 e1d8b2a2949e04c7c1015ac3ecad7939 276 Gene3D G3DSA:3.40.50.150 54 275 4.0E-76 T 14-10-2018 GYO_4134 e1d8b2a2949e04c7c1015ac3ecad7939 276 SUPERFAMILY SSF53335 4 275 5.76E-90 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase GYO_4134 e1d8b2a2949e04c7c1015ac3ecad7939 276 Gene3D G3DSA:2.30.140.10 2 53 2.1E-26 T 14-10-2018 IPR037163 Spermidine synthase, tetramerisation domain superfamily KEGG: 00270+2.5.1.16|KEGG: 00330+2.5.1.16|KEGG: 00410+2.5.1.16|KEGG: 00480+2.5.1.16|Reactome: R-HSA-351202 GYO_4134 e1d8b2a2949e04c7c1015ac3ecad7939 276 TIGRFAM TIGR00417 speE: spermidine synthase 5 270 4.9E-127 T 14-10-2018 IPR001045 Spermidine/spermine synthases GO:0003824 KEGG: 00270+2.5.1.16|KEGG: 00330+2.5.1.16|KEGG: 00410+2.5.1.16|KEGG: 00480+2.5.1.16|Reactome: R-HSA-351202 GYO_4134 e1d8b2a2949e04c7c1015ac3ecad7939 276 Pfam PF17284 Spermidine synthase tetramerisation domain 4 56 3.9E-22 T 14-10-2018 IPR035246 Spermidine synthase, tetramerisation domain KEGG: 00270+2.5.1.16|KEGG: 00330+2.5.1.16|KEGG: 00410+2.5.1.16|KEGG: 00480+2.5.1.16|Reactome: R-HSA-351202 GYO_4134 e1d8b2a2949e04c7c1015ac3ecad7939 276 ProSitePatterns PS01330 Polyamine biosynthesis (PABS) domain signature. 80 93 - T 14-10-2018 IPR030373 Polyamine biosynthesis domain, conserved site KEGG: 00270+2.5.1.16|KEGG: 00330+2.5.1.16|KEGG: 00410+2.5.1.16|KEGG: 00480+2.5.1.16|Reactome: R-HSA-351202 GYO_4134 e1d8b2a2949e04c7c1015ac3ecad7939 276 Hamap MF_00198 Polyamine aminopropyltransferase [speE]. 4 276 41.877 T 14-10-2018 IPR001045 Spermidine/spermine synthases GO:0003824 KEGG: 00270+2.5.1.16|KEGG: 00330+2.5.1.16|KEGG: 00410+2.5.1.16|KEGG: 00480+2.5.1.16|Reactome: R-HSA-351202 GYO_4134 e1d8b2a2949e04c7c1015ac3ecad7939 276 Pfam PF01564 Spermine/spermidine synthase domain 59 237 5.8E-71 T 14-10-2018 GYO_1098 5ef4c1709530dc023b140fae1cd8bcf3 220 SMART SM00421 155 212 1.6E-25 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 GYO_1098 5ef4c1709530dc023b140fae1cd8bcf3 220 Pfam PF00072 Response regulator receiver domain 4 115 2.7E-26 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 GYO_1098 5ef4c1709530dc023b140fae1cd8bcf3 220 Pfam PF00196 Bacterial regulatory proteins, luxR family 158 211 5.4E-19 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 GYO_1098 5ef4c1709530dc023b140fae1cd8bcf3 220 SUPERFAMILY SSF52172 1 133 4.41E-31 T 14-10-2018 IPR011006 CheY-like superfamily GYO_1098 5ef4c1709530dc023b140fae1cd8bcf3 220 ProSitePatterns PS00622 LuxR-type HTH domain signature. 172 199 - T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 GYO_1098 5ef4c1709530dc023b140fae1cd8bcf3 220 SMART SM00448 2 115 1.8E-28 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 GYO_1098 5ef4c1709530dc023b140fae1cd8bcf3 220 SUPERFAMILY SSF46894 153 217 6.12E-21 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 GYO_1098 5ef4c1709530dc023b140fae1cd8bcf3 220 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 158 172 2.8E-14 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 GYO_1098 5ef4c1709530dc023b140fae1cd8bcf3 220 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 188 200 2.8E-14 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 GYO_1098 5ef4c1709530dc023b140fae1cd8bcf3 220 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 172 188 2.8E-14 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 GYO_1098 5ef4c1709530dc023b140fae1cd8bcf3 220 Gene3D G3DSA:3.40.50.12740 2 217 8.0E-68 T 14-10-2018 GYO_1587 904ab28a41b1649c521651f451b799b7 141 Pfam PF10934 Protein of unknown function (DUF2634) 25 124 9.4E-28 T 14-10-2018 IPR020288 Protein of unknown function DUF2634 GYO_1587 904ab28a41b1649c521651f451b799b7 141 ProDom PD033094 XKDS PHAGE-LIKE PBSX ELEMENT PHAGE LIN1286 RELATED YQBS 11 137 2.0E-64 T 14-10-2018 IPR020288 Protein of unknown function DUF2634 GYO_1013 d193e56dd570612ca55110ee28aef0e6 487 SUPERFAMILY SSF56436 204 468 3.53E-55 T 14-10-2018 IPR016187 C-type lectin fold GYO_1013 d193e56dd570612ca55110ee28aef0e6 487 Gene3D G3DSA:3.90.1580.10 189 476 2.1E-49 T 14-10-2018 GYO_1013 d193e56dd570612ca55110ee28aef0e6 487 Pfam PF03781 Sulfatase-modifying factor enzyme 1 202 466 1.3E-67 T 14-10-2018 IPR005532 Sulfatase-modifying factor enzyme Reactome: R-HSA-1660662|Reactome: R-HSA-1663150 GYO_0772 6c51b69f835d327aa6595cbb7e1fcde6 226 SMART SM00418 7 86 3.1E-22 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 GYO_0772 6c51b69f835d327aa6595cbb7e1fcde6 226 Gene3D G3DSA:1.10.10.10 2 95 1.3E-17 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily GYO_0772 6c51b69f835d327aa6595cbb7e1fcde6 226 SUPERFAMILY SSF46785 4 86 1.06E-18 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily GYO_0772 6c51b69f835d327aa6595cbb7e1fcde6 226 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 42 57 8.6E-6 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 GYO_0772 6c51b69f835d327aa6595cbb7e1fcde6 226 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 57 72 8.6E-6 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 GYO_0772 6c51b69f835d327aa6595cbb7e1fcde6 226 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 9 24 8.6E-6 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 GYO_0772 6c51b69f835d327aa6595cbb7e1fcde6 226 Pfam PF12840 Helix-turn-helix domain 7 66 3.3E-11 T 14-10-2018 GYO_3047 68b2831f54b2d73362c56df6929a5ead 189 SUPERFAMILY SSF52972 2 184 3.66E-65 T 14-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like GYO_3047 68b2831f54b2d73362c56df6929a5ead 189 PIRSF PIRSF006305 1 189 7.9E-68 T 14-10-2018 IPR003697 Maf-like protein GO:0047429 GYO_3047 68b2831f54b2d73362c56df6929a5ead 189 Gene3D G3DSA:3.90.950.10 1 189 3.6E-83 T 14-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like GYO_3047 68b2831f54b2d73362c56df6929a5ead 189 Pfam PF02545 Maf-like protein 5 184 5.6E-61 T 14-10-2018 IPR003697 Maf-like protein GO:0047429 GYO_3047 68b2831f54b2d73362c56df6929a5ead 189 TIGRFAM TIGR00172 maf: septum formation protein Maf 1 183 1.7E-79 T 14-10-2018 IPR003697 Maf-like protein GO:0047429 GYO_3047 68b2831f54b2d73362c56df6929a5ead 189 Hamap MF_00528 Septum formation protein Maf [maf]. 4 189 33.002 T 14-10-2018 IPR003697 Maf-like protein GO:0047429 GYO_1067 16aeb45e00bce3c1225e99c13a2a2001 287 Gene3D G3DSA:1.10.340.30 115 234 1.9E-50 T 14-10-2018 GYO_1067 16aeb45e00bce3c1225e99c13a2a2001 287 Gene3D G3DSA:1.10.1670.40 235 284 1.9E-50 T 14-10-2018 GYO_1067 16aeb45e00bce3c1225e99c13a2a2001 287 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 124 273 6.1E-21 T 14-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 GYO_1067 16aeb45e00bce3c1225e99c13a2a2001 287 SUPERFAMILY SSF48150 108 285 2.36E-39 T 14-10-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 GYO_1067 16aeb45e00bce3c1225e99c13a2a2001 287 SMART SM00478 127 286 3.1E-35 T 14-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 GYO_0676 202ce491586d15afc84318f485e7473f 106 SUPERFAMILY SSF52833 2 105 1.09E-27 T 14-10-2018 IPR036249 Thioredoxin-like superfamily GYO_0676 202ce491586d15afc84318f485e7473f 106 Gene3D G3DSA:3.40.30.10 1 106 1.8E-26 T 14-10-2018 GYO_0676 202ce491586d15afc84318f485e7473f 106 Pfam PF00085 Thioredoxin 4 103 1.2E-20 T 14-10-2018 IPR013766 Thioredoxin domain GO:0045454 GYO_0676 202ce491586d15afc84318f485e7473f 106 PIRSF PIRSF000077 1 105 1.5E-20 T 14-10-2018 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 GYO_1357 fb16e77d8aedc02dcf65c4f161ea7768 350 Gene3D G3DSA:3.30.360.10 120 346 3.0E-32 T 14-10-2018 GYO_1357 fb16e77d8aedc02dcf65c4f161ea7768 350 SUPERFAMILY SSF55347 128 272 5.63E-19 T 14-10-2018 GYO_1357 fb16e77d8aedc02dcf65c4f161ea7768 350 SUPERFAMILY SSF51735 3 148 6.41E-44 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily GYO_1357 fb16e77d8aedc02dcf65c4f161ea7768 350 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 3 118 1.5E-29 T 14-10-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 GYO_1357 fb16e77d8aedc02dcf65c4f161ea7768 350 Gene3D G3DSA:3.40.50.720 2 119 3.4E-32 T 14-10-2018 GYO_1357 fb16e77d8aedc02dcf65c4f161ea7768 350 Pfam PF02894 Oxidoreductase family, C-terminal alpha/beta domain 130 249 1.2E-22 T 14-10-2018 IPR004104 Oxidoreductase, C-terminal GO:0016491|GO:0055114 GYO_1647 32a2cbc81661c5e5f2e1feae686ab1f7 200 SUPERFAMILY SSF89957 9 193 7.85E-65 T 14-10-2018 IPR029756 MTH1187/YkoF-like GYO_1647 32a2cbc81661c5e5f2e1feae686ab1f7 200 Pfam PF07615 YKOF-related Family 115 194 4.7E-34 T 14-10-2018 IPR011522 Thiamin/hydroxymethyl pyrimidine-binding YkoF, putative GYO_1647 32a2cbc81661c5e5f2e1feae686ab1f7 200 Pfam PF07615 YKOF-related Family 10 88 4.3E-32 T 14-10-2018 IPR011522 Thiamin/hydroxymethyl pyrimidine-binding YkoF, putative GYO_1647 32a2cbc81661c5e5f2e1feae686ab1f7 200 Gene3D G3DSA:3.30.70.930 112 200 4.2E-38 T 14-10-2018 IPR029756 MTH1187/YkoF-like GYO_1647 32a2cbc81661c5e5f2e1feae686ab1f7 200 PIRSF PIRSF021331 1 196 3.0E-99 T 14-10-2018 IPR015835 Hydroxymethyl pyrimidine (HMP)/thiamine binding protein GO:0030975 GYO_1647 32a2cbc81661c5e5f2e1feae686ab1f7 200 Gene3D G3DSA:3.30.70.930 1 86 7.1E-31 T 14-10-2018 IPR029756 MTH1187/YkoF-like GYO_1104 2f4d2d95eaf127eb2dae17da8dae0cf0 182 Pfam PF10400 Virulence activator alpha C-term 94 179 1.7E-16 T 14-10-2018 IPR018309 Transcription regulator PadR, C-terminal GYO_1104 2f4d2d95eaf127eb2dae17da8dae0cf0 182 Gene3D G3DSA:1.10.10.10 3 88 1.0E-24 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily GYO_1104 2f4d2d95eaf127eb2dae17da8dae0cf0 182 Pfam PF03551 Transcriptional regulator PadR-like family 8 81 2.2E-17 T 14-10-2018 IPR005149 Transcription regulator PadR, N-terminal GYO_1104 2f4d2d95eaf127eb2dae17da8dae0cf0 182 SUPERFAMILY SSF46785 4 181 8.39E-40 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily GYO_2631 5b3a8b3d8ee2f2d3b64b9bc95ed0aa67 469 Gene3D G3DSA:1.20.5.320 436 469 2.7E-22 T 14-10-2018 GYO_2631 5b3a8b3d8ee2f2d3b64b9bc95ed0aa67 469 Gene3D G3DSA:3.40.50.720 1 179 8.4E-61 T 14-10-2018 GYO_2631 5b3a8b3d8ee2f2d3b64b9bc95ed0aa67 469 SUPERFAMILY SSF51735 4 176 2.63E-55 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily GYO_2631 5b3a8b3d8ee2f2d3b64b9bc95ed0aa67 469 Pfam PF00393 6-phosphogluconate dehydrogenase, C-terminal domain 178 467 2.5E-137 T 14-10-2018 IPR006114 6-phosphogluconate dehydrogenase, C-terminal GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 GYO_2631 5b3a8b3d8ee2f2d3b64b9bc95ed0aa67 469 PIRSF PIRSF000109 1 469 3.2E-246 T 14-10-2018 IPR006113 6-phosphogluconate dehydrogenase, decarboxylating GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 GYO_2631 5b3a8b3d8ee2f2d3b64b9bc95ed0aa67 469 TIGRFAM TIGR00873 gnd: 6-phosphogluconate dehydrogenase (decarboxylating) 5 468 3.0E-233 T 14-10-2018 IPR006113 6-phosphogluconate dehydrogenase, decarboxylating GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 GYO_2631 5b3a8b3d8ee2f2d3b64b9bc95ed0aa67 469 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 119 144 1.8E-88 T 14-10-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0004616|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 GYO_2631 5b3a8b3d8ee2f2d3b64b9bc95ed0aa67 469 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 167 195 1.8E-88 T 14-10-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0004616|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 GYO_2631 5b3a8b3d8ee2f2d3b64b9bc95ed0aa67 469 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 357 379 1.8E-88 T 14-10-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0004616|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 GYO_2631 5b3a8b3d8ee2f2d3b64b9bc95ed0aa67 469 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 4 27 1.8E-88 T 14-10-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0004616|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 GYO_2631 5b3a8b3d8ee2f2d3b64b9bc95ed0aa67 469 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 66 95 1.8E-88 T 14-10-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0004616|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 GYO_2631 5b3a8b3d8ee2f2d3b64b9bc95ed0aa67 469 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 249 276 1.8E-88 T 14-10-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0004616|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 GYO_2631 5b3a8b3d8ee2f2d3b64b9bc95ed0aa67 469 SUPERFAMILY SSF48179 176 468 4.15E-133 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 GYO_2631 5b3a8b3d8ee2f2d3b64b9bc95ed0aa67 469 Gene3D G3DSA:1.10.1040.10 180 435 1.9E-112 T 14-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 GYO_2631 5b3a8b3d8ee2f2d3b64b9bc95ed0aa67 469 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 5 168 1.5E-54 T 14-10-2018 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0050661 GYO_2631 5b3a8b3d8ee2f2d3b64b9bc95ed0aa67 469 SMART SM01350 178 468 1.5E-232 T 14-10-2018 IPR006114 6-phosphogluconate dehydrogenase, C-terminal GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 GYO_2631 5b3a8b3d8ee2f2d3b64b9bc95ed0aa67 469 ProSitePatterns PS00461 6-phosphogluconate dehydrogenase signature. 253 265 - T 14-10-2018 IPR006184 6-phosphogluconate-binding site GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 GYO_2261 ddbce79767b3abb8785ef0d48cdfce90 292 Pfam PF00892 EamA-like transporter family 149 284 1.8E-28 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 GYO_2261 ddbce79767b3abb8785ef0d48cdfce90 292 Pfam PF00892 EamA-like transporter family 5 136 9.4E-27 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 GYO_2261 ddbce79767b3abb8785ef0d48cdfce90 292 SUPERFAMILY SSF103481 183 284 2.48E-14 T 14-10-2018 GYO_2261 ddbce79767b3abb8785ef0d48cdfce90 292 SUPERFAMILY SSF103481 38 138 3.14E-14 T 14-10-2018 GYO_0557 6e10f3b7fbadfa75c831cdf1fe6c6c76 574 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 334 516 3.3E-59 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 GYO_0557 6e10f3b7fbadfa75c831cdf1fe6c6c76 574 SMART SM00304 209 261 1.3E-6 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 GYO_0557 6e10f3b7fbadfa75c831cdf1fe6c6c76 574 Pfam PF17202 Single cache domain 3 81 180 6.7E-35 T 14-10-2018 IPR033463 Single cache domain 3 GYO_0557 6e10f3b7fbadfa75c831cdf1fe6c6c76 574 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 465 494 5.4E-26 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 GYO_0557 6e10f3b7fbadfa75c831cdf1fe6c6c76 574 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 8 33 5.4E-26 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 GYO_0557 6e10f3b7fbadfa75c831cdf1fe6c6c76 574 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 388 415 5.4E-26 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 GYO_0557 6e10f3b7fbadfa75c831cdf1fe6c6c76 574 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 417 446 5.4E-26 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 GYO_0557 6e10f3b7fbadfa75c831cdf1fe6c6c76 574 SUPERFAMILY SSF103190 72 182 1.2E-10 T 14-10-2018 IPR029151 Periplasmic sensor-like domain superfamily GYO_0557 6e10f3b7fbadfa75c831cdf1fe6c6c76 574 SUPERFAMILY SSF58104 229 565 7.32E-66 T 14-10-2018 GYO_0557 6e10f3b7fbadfa75c831cdf1fe6c6c76 574 Gene3D G3DSA:1.10.287.950 231 565 1.4E-65 T 14-10-2018 GYO_0557 6e10f3b7fbadfa75c831cdf1fe6c6c76 574 SMART SM00283 290 565 5.9E-95 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 GYO_2414 5f2688c9f5ce266f429565ad89fd4fee 199 Gene3D G3DSA:3.40.50.880 1 198 6.5E-85 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like GYO_2414 5f2688c9f5ce266f429565ad89fd4fee 199 Pfam PF04204 Homoserine O-succinyltransferase 1 196 1.9E-90 T 14-10-2018 IPR033752 MetA family GYO_2414 5f2688c9f5ce266f429565ad89fd4fee 199 ProDom PD037892 HOMOSERINE O-SUCCINYLTRANSFERASE TRANSFERASE ACYLTRANSFERASE BIOSYNTHESIS TRANSSUCCINYLASE HTS METHIONINE O- AMINO-ACID 1 186 2.0E-102 T 14-10-2018 GYO_2414 5f2688c9f5ce266f429565ad89fd4fee 199 SUPERFAMILY SSF52317 1 194 3.54E-62 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like GYO_1252 9847e5209abf69f46e30f01e7b1c236b 131 Pfam PF02537 CrcB-like protein, Camphor Resistance (CrcB) 6 112 9.0E-23 T 14-10-2018 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 GYO_1252 9847e5209abf69f46e30f01e7b1c236b 131 Hamap MF_00454 Putative fluoride ion transporter CrcB [crcB]. 4 117 17.924 T 14-10-2018 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 GYO_1181 707636fe5e5f60e9aa69427a1003261d 157 Hamap MF_01885 tRNA (cytidine(34)-2'-O)-methyltransferase [trmL]. 3 154 34.464 T 14-10-2018 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase GO:0001510|GO:0008168 GYO_1181 707636fe5e5f60e9aa69427a1003261d 157 Pfam PF00588 SpoU rRNA Methylase family 3 145 1.9E-34 T 14-10-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 GYO_1181 707636fe5e5f60e9aa69427a1003261d 157 PIRSF PIRSF029256 2 157 4.1E-69 T 14-10-2018 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase GO:0001510|GO:0008168 GYO_1181 707636fe5e5f60e9aa69427a1003261d 157 SUPERFAMILY SSF75217 3 155 4.38E-45 T 14-10-2018 IPR029028 Alpha/beta knot methyltransferases GYO_1181 707636fe5e5f60e9aa69427a1003261d 157 Gene3D G3DSA:3.40.1280.10 1 157 9.4E-68 T 14-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal GYO_1181 707636fe5e5f60e9aa69427a1003261d 157 TIGRFAM TIGR00185 tRNA_yibK_trmL: tRNA (cytidine(34)-2'-O)-methyltransferase 2 156 3.1E-73 T 14-10-2018 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase GO:0001510|GO:0008168 GYO_2547 a8280000e205ee4f88bce1230f1d2ede 179 Hamap MF_01319 Thiol-disulfide oxidoreductase ResA [resA]. 1 174 45.141 T 14-10-2018 IPR023555 Thiol-disulphide oxidoreductase ResA GO:0005886|GO:0015036|GO:0017004 GYO_2547 a8280000e205ee4f88bce1230f1d2ede 179 Pfam PF00578 AhpC/TSA family 39 154 2.7E-35 T 14-10-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 GYO_2547 a8280000e205ee4f88bce1230f1d2ede 179 SUPERFAMILY SSF52833 10 169 3.48E-44 T 14-10-2018 IPR036249 Thioredoxin-like superfamily GYO_2547 a8280000e205ee4f88bce1230f1d2ede 179 Gene3D G3DSA:3.40.30.10 37 177 2.9E-48 T 14-10-2018 GYO_2547 a8280000e205ee4f88bce1230f1d2ede 179 ProSitePatterns PS00194 Thioredoxin family active site. 66 84 - T 14-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 GYO_2028 ed193175b342f40aa49df81119a9c7aa 85 Pfam PF05239 PRC-barrel domain 1 80 3.7E-16 T 14-10-2018 IPR027275 PRC-barrel domain GYO_2028 ed193175b342f40aa49df81119a9c7aa 85 Gene3D G3DSA:2.30.30.240 1 79 2.1E-8 T 14-10-2018 GYO_2028 ed193175b342f40aa49df81119a9c7aa 85 SUPERFAMILY SSF50346 1 75 8.63E-12 T 14-10-2018 IPR011033 PRC-barrel-like superfamily GYO_2028 ed193175b342f40aa49df81119a9c7aa 85 TIGRFAM TIGR02888 spore_YlmC_YmxH: sporulation protein, YlmC/YmxH family 2 76 1.7E-28 T 14-10-2018 IPR014238 Sporulation protein YlmC/YmxH GYO_3103 0668677edabdfc5a2651ee0ff1c9886b 559 Pfam PF13193 AMP-binding enzyme C-terminal domain 468 543 3.9E-21 T 14-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain GYO_3103 0668677edabdfc5a2651ee0ff1c9886b 559 Gene3D G3DSA:3.40.50.12780 14 450 3.6E-126 T 14-10-2018 GYO_3103 0668677edabdfc5a2651ee0ff1c9886b 559 Gene3D G3DSA:3.30.300.310 455 558 2.0E-33 T 14-10-2018 GYO_3103 0668677edabdfc5a2651ee0ff1c9886b 559 Pfam PF00501 AMP-binding enzyme 31 458 6.3E-110 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 GYO_3103 0668677edabdfc5a2651ee0ff1c9886b 559 ProSitePatterns PS00455 Putative AMP-binding domain signature. 211 222 - T 14-10-2018 IPR020845 AMP-binding, conserved site GYO_3103 0668677edabdfc5a2651ee0ff1c9886b 559 SUPERFAMILY SSF56801 22 555 4.71E-154 T 14-10-2018 GYO_2033 b3d6cc09930e1b5108f8e73fe5639fa2 290 ProSitePatterns PS00665 Dihydrodipicolinate synthase signature 1. 39 56 - T 14-10-2018 IPR020624 Schiff base-forming aldolase, conserved site GO:0016829 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 GYO_2033 b3d6cc09930e1b5108f8e73fe5639fa2 290 TIGRFAM TIGR00674 dapA: 4-hydroxy-tetrahydrodipicolinate synthase 6 289 7.8E-123 T 14-10-2018 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA GO:0008840|GO:0009089 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 GYO_2033 b3d6cc09930e1b5108f8e73fe5639fa2 290 Hamap MF_00418 4-hydroxy-tetrahydrodipicolinate synthase [dapA]. 2 289 64.698 T 14-10-2018 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA GO:0008840|GO:0009089 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 GYO_2033 b3d6cc09930e1b5108f8e73fe5639fa2 290 PIRSF PIRSF001365 1 290 1.5E-97 T 14-10-2018 IPR002220 DapA-like GO:0016829 GYO_2033 b3d6cc09930e1b5108f8e73fe5639fa2 290 Pfam PF00701 Dihydrodipicolinate synthetase family 3 289 2.0E-124 T 14-10-2018 IPR002220 DapA-like GO:0016829 GYO_2033 b3d6cc09930e1b5108f8e73fe5639fa2 290 PRINTS PR00146 Dihydrodipicolinate synthase signature 104 120 4.5E-37 T 14-10-2018 IPR002220 DapA-like GO:0016829 GYO_2033 b3d6cc09930e1b5108f8e73fe5639fa2 290 PRINTS PR00146 Dihydrodipicolinate synthase signature 36 57 4.5E-37 T 14-10-2018 IPR002220 DapA-like GO:0016829 GYO_2033 b3d6cc09930e1b5108f8e73fe5639fa2 290 PRINTS PR00146 Dihydrodipicolinate synthase signature 129 146 4.5E-37 T 14-10-2018 IPR002220 DapA-like GO:0016829 GYO_2033 b3d6cc09930e1b5108f8e73fe5639fa2 290 PRINTS PR00146 Dihydrodipicolinate synthase signature 72 90 4.5E-37 T 14-10-2018 IPR002220 DapA-like GO:0016829 GYO_2033 b3d6cc09930e1b5108f8e73fe5639fa2 290 ProSitePatterns PS00666 Dihydrodipicolinate synthase signature 2. 134 165 - T 14-10-2018 IPR020625 Schiff base-forming aldolase, active site GO:0016829 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|Reactome: R-HSA-389661 GYO_2033 b3d6cc09930e1b5108f8e73fe5639fa2 290 SMART SM01130 2 290 3.1E-140 T 14-10-2018 IPR002220 DapA-like GO:0016829 GYO_2033 b3d6cc09930e1b5108f8e73fe5639fa2 290 Gene3D G3DSA:3.20.20.70 1 290 3.9E-114 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 GYO_2033 b3d6cc09930e1b5108f8e73fe5639fa2 290 SUPERFAMILY SSF51569 3 286 1.36E-101 T 14-10-2018 GYO_3611 5a6c9dda997470ff5fb1de4c3ac49b46 482 PIRSF PIRSF005690 1 482 7.1E-179 T 14-10-2018 IPR004995 Bacillus/Clostridium Ger spore germination protein GO:0009847|GO:0016021 GYO_3611 5a6c9dda997470ff5fb1de4c3ac49b46 482 Pfam PF03323 Bacillus/Clostridium GerA spore germination protein 20 466 6.0E-167 T 14-10-2018 IPR004995 Bacillus/Clostridium Ger spore germination protein GO:0009847|GO:0016021 GYO_0722 c5551aa2e16a389309463437046297f7 436 Gene3D G3DSA:1.20.1250.20 29 427 1.2E-40 T 14-10-2018 GYO_0722 c5551aa2e16a389309463437046297f7 436 SUPERFAMILY SSF103473 31 433 7.32E-48 T 14-10-2018 IPR036259 MFS transporter superfamily GYO_0722 c5551aa2e16a389309463437046297f7 436 Pfam PF07690 Major Facilitator Superfamily 51 296 2.6E-15 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 GYO_1887 809482ab529d1620cadfbfb503925e9a 151 Hamap MF_01197 Cell division protein SepF [sepF]. 1 143 21.458 T 14-10-2018 IPR023052 Cell division protein SepF GO:0090529 GYO_1887 809482ab529d1620cadfbfb503925e9a 151 Pfam PF04472 Cell division protein SepF 64 135 3.5E-31 T 14-10-2018 IPR007561 Cell division protein SepF/SepF-related GO:0090529 GYO_1887 809482ab529d1620cadfbfb503925e9a 151 Gene3D G3DSA:3.30.110.150 57 151 4.6E-38 T 14-10-2018 IPR038594 SepF-like superfamily GYO_1328 6356220bdcb88b1f17d99d263ad20dc9 381 ProSitePatterns PS00137 Serine proteases, subtilase family, histidine active site. 170 180 - T 14-10-2018 IPR022398 Peptidase S8, subtilisin, His-active site GYO_1328 6356220bdcb88b1f17d99d263ad20dc9 381 SUPERFAMILY SSF52743 107 380 4.97E-96 T 14-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 GYO_1328 6356220bdcb88b1f17d99d263ad20dc9 381 ProSitePatterns PS00138 Serine proteases, subtilase family, serine active site. 325 335 - T 14-10-2018 IPR023828 Peptidase S8, subtilisin, Ser-active site GYO_1328 6356220bdcb88b1f17d99d263ad20dc9 381 Gene3D G3DSA:3.40.50.200 109 381 1.0E-116 T 14-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 GYO_1328 6356220bdcb88b1f17d99d263ad20dc9 381 ProSitePatterns PS00136 Serine proteases, subtilase family, aspartic acid active site. 134 145 - T 14-10-2018 IPR023827 Peptidase S8, subtilisin, Asp-active site GYO_1328 6356220bdcb88b1f17d99d263ad20dc9 381 Pfam PF05922 Peptidase inhibitor I9 38 103 7.6E-6 T 14-10-2018 IPR010259 Peptidase S8 propeptide/proteinase inhibitor I9 Reactome: R-HSA-381426|Reactome: R-HSA-8866427|Reactome: R-HSA-8957275|Reactome: R-HSA-8964038 GYO_1328 6356220bdcb88b1f17d99d263ad20dc9 381 SUPERFAMILY SSF54897 36 105 2.32E-23 T 14-10-2018 GYO_1328 6356220bdcb88b1f17d99d263ad20dc9 381 Pfam PF00082 Subtilase family 129 372 9.5E-63 T 14-10-2018 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 GYO_1328 6356220bdcb88b1f17d99d263ad20dc9 381 Gene3D G3DSA:3.30.70.80 29 108 9.6E-27 T 14-10-2018 IPR037045 Peptidase S8 propeptide/proteinase inhibitor I9 superfamily Reactome: R-HSA-381426|Reactome: R-HSA-8866427|Reactome: R-HSA-8957275|Reactome: R-HSA-8964038 GYO_1328 6356220bdcb88b1f17d99d263ad20dc9 381 PRINTS PR00723 Subtilisin serine protease family (S8) signature 166 179 2.5E-23 T 14-10-2018 IPR015500 Peptidase S8, subtilisin-related GYO_1328 6356220bdcb88b1f17d99d263ad20dc9 381 PRINTS PR00723 Subtilisin serine protease family (S8) signature 129 148 2.5E-23 T 14-10-2018 IPR015500 Peptidase S8, subtilisin-related GYO_1328 6356220bdcb88b1f17d99d263ad20dc9 381 PRINTS PR00723 Subtilisin serine protease family (S8) signature 324 340 2.5E-23 T 14-10-2018 IPR015500 Peptidase S8, subtilisin-related GYO_2623 5b3faa4124b97ffe4b5b3d55b830b65a 278 Gene3D G3DSA:3.40.50.720 1 162 8.4E-48 T 14-10-2018 GYO_2623 5b3faa4124b97ffe4b5b3d55b830b65a 278 TIGRFAM TIGR00112 proC: pyrroline-5-carboxylate reductase 4 265 1.1E-85 T 14-10-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 GYO_2623 5b3faa4124b97ffe4b5b3d55b830b65a 278 ProSitePatterns PS00521 Delta 1-pyrroline-5-carboxylate reductase signature. 221 243 - T 14-10-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 GYO_2623 5b3faa4124b97ffe4b5b3d55b830b65a 278 Pfam PF03807 NADP oxidoreductase coenzyme F420-dependent 3 98 1.7E-22 T 14-10-2018 IPR028939 Pyrroline-5-carboxylate reductase, catalytic, N-terminal GYO_2623 5b3faa4124b97ffe4b5b3d55b830b65a 278 SUPERFAMILY SSF48179 160 268 3.57E-34 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 GYO_2623 5b3faa4124b97ffe4b5b3d55b830b65a 278 SUPERFAMILY SSF51735 2 158 4.09E-32 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily GYO_2623 5b3faa4124b97ffe4b5b3d55b830b65a 278 Gene3D G3DSA:1.10.3730.10 163 270 1.1E-39 T 14-10-2018 GYO_2623 5b3faa4124b97ffe4b5b3d55b830b65a 278 Hamap MF_01925 Pyrroline-5-carboxylate reductase [proC]. 2 265 26.427 T 14-10-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 GYO_2623 5b3faa4124b97ffe4b5b3d55b830b65a 278 Pfam PF14748 Pyrroline-5-carboxylate reductase dimerisation 161 264 8.9E-36 T 14-10-2018 IPR029036 Pyrroline-5-carboxylate reductase, dimerisation domain KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 GYO_2623 5b3faa4124b97ffe4b5b3d55b830b65a 278 PIRSF PIRSF000193 1 268 1.0E-81 T 14-10-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 GYO_1474 a4bf9eccb4d27d083b79312fbf3e8094 254 Hamap MF_00443 Thiazole synthase [thiG]. 1 254 42.269 T 14-10-2018 IPR008867 Thiazole synthase GO:0009228 KEGG: 00730+2.8.1.10|MetaCyc: PWY-6891|MetaCyc: PWY-6892 GYO_1474 a4bf9eccb4d27d083b79312fbf3e8094 254 Pfam PF05690 Thiazole biosynthesis protein ThiG 4 248 9.7E-111 T 14-10-2018 IPR033983 Thiazole synthase ThiG KEGG: 00730+2.8.1.10|MetaCyc: PWY-6891|MetaCyc: PWY-6892 GYO_1474 a4bf9eccb4d27d083b79312fbf3e8094 254 SUPERFAMILY SSF110399 1 238 8.76E-82 T 14-10-2018 GYO_1474 a4bf9eccb4d27d083b79312fbf3e8094 254 Gene3D G3DSA:3.20.20.70 1 254 2.6E-118 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 GYO_2519 e597ef612454ca408f1cb639a9f9c42a 382 Pfam PF00575 S1 RNA binding domain 13 83 3.5E-16 T 14-10-2018 IPR003029 S1 domain GO:0003676 GYO_2519 e597ef612454ca408f1cb639a9f9c42a 382 Pfam PF00575 S1 RNA binding domain 98 167 8.5E-16 T 14-10-2018 IPR003029 S1 domain GO:0003676 GYO_2519 e597ef612454ca408f1cb639a9f9c42a 382 Pfam PF00575 S1 RNA binding domain 269 342 2.7E-24 T 14-10-2018 IPR003029 S1 domain GO:0003676 GYO_2519 e597ef612454ca408f1cb639a9f9c42a 382 Pfam PF00575 S1 RNA binding domain 185 256 8.5E-27 T 14-10-2018 IPR003029 S1 domain GO:0003676 GYO_2519 e597ef612454ca408f1cb639a9f9c42a 382 SUPERFAMILY SSF50249 88 170 8.95E-15 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold GYO_2519 e597ef612454ca408f1cb639a9f9c42a 382 PRINTS PR00681 Ribosomal protein S1 signature 325 343 3.9E-50 T 14-10-2018 GYO_2519 e597ef612454ca408f1cb639a9f9c42a 382 PRINTS PR00681 Ribosomal protein S1 signature 151 171 3.9E-50 T 14-10-2018 GYO_2519 e597ef612454ca408f1cb639a9f9c42a 382 PRINTS PR00681 Ribosomal protein S1 signature 81 100 3.9E-50 T 14-10-2018 GYO_2519 e597ef612454ca408f1cb639a9f9c42a 382 PRINTS PR00681 Ribosomal protein S1 signature 105 121 3.9E-50 T 14-10-2018 GYO_2519 e597ef612454ca408f1cb639a9f9c42a 382 PRINTS PR00681 Ribosomal protein S1 signature 286 305 3.9E-50 T 14-10-2018 GYO_2519 e597ef612454ca408f1cb639a9f9c42a 382 PRINTS PR00681 Ribosomal protein S1 signature 208 229 3.9E-50 T 14-10-2018 GYO_2519 e597ef612454ca408f1cb639a9f9c42a 382 PRINTS PR00681 Ribosomal protein S1 signature 122 139 3.9E-50 T 14-10-2018 GYO_2519 e597ef612454ca408f1cb639a9f9c42a 382 PRINTS PR00681 Ribosomal protein S1 signature 16 34 3.9E-50 T 14-10-2018 GYO_2519 e597ef612454ca408f1cb639a9f9c42a 382 SUPERFAMILY SSF50249 10 109 1.36E-17 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold GYO_2519 e597ef612454ca408f1cb639a9f9c42a 382 SUPERFAMILY SSF50249 185 270 4.79E-28 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold GYO_2519 e597ef612454ca408f1cb639a9f9c42a 382 Gene3D G3DSA:2.40.50.140 95 180 5.1E-11 T 14-10-2018 GYO_2519 e597ef612454ca408f1cb639a9f9c42a 382 SUPERFAMILY SSF50249 262 345 3.5E-24 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold GYO_2519 e597ef612454ca408f1cb639a9f9c42a 382 Gene3D G3DSA:2.40.50.140 2 94 7.5E-15 T 14-10-2018 GYO_2519 e597ef612454ca408f1cb639a9f9c42a 382 Gene3D G3DSA:2.40.50.140 267 352 5.4E-29 T 14-10-2018 GYO_2519 e597ef612454ca408f1cb639a9f9c42a 382 Gene3D G3DSA:2.40.50.140 183 265 4.1E-30 T 14-10-2018 GYO_2519 e597ef612454ca408f1cb639a9f9c42a 382 SMART SM00316 186 256 2.2E-29 T 14-10-2018 IPR022967 RNA-binding domain, S1 GYO_2519 e597ef612454ca408f1cb639a9f9c42a 382 SMART SM00316 271 342 4.5E-26 T 14-10-2018 IPR022967 RNA-binding domain, S1 GYO_2519 e597ef612454ca408f1cb639a9f9c42a 382 SMART SM00316 100 167 5.2E-8 T 14-10-2018 IPR022967 RNA-binding domain, S1 GYO_2519 e597ef612454ca408f1cb639a9f9c42a 382 SMART SM00316 14 84 4.7E-14 T 14-10-2018 IPR022967 RNA-binding domain, S1 GYO_3485 52da8abb7f7c761c435d3f182d11e914 225 Pfam PF10042 Uncharacterized conserved protein (DUF2278) 1 212 5.1E-71 T 14-10-2018 IPR019268 Protein of unknown function DUF2278 GYO_1305 ed7f15b335a9556316a2d6d46285647f 166 Gene3D G3DSA:3.30.70.3430 1 166 1.1E-74 T 14-10-2018 GYO_1305 ed7f15b335a9556316a2d6d46285647f 166 SUPERFAMILY SSF54909 66 165 3.18E-24 T 14-10-2018 IPR011008 Dimeric alpha-beta barrel GYO_1305 ed7f15b335a9556316a2d6d46285647f 166 Pfam PF03992 Antibiotic biosynthesis monooxygenase 66 139 6.6E-16 T 14-10-2018 IPR007138 Antibiotic biosynthesis monooxygenase domain GYO_1919 f93f1cf63f7dcc2c370d4534d8126feb 406 Gene3D G3DSA:3.40.50.1950 1 186 2.4E-61 T 14-10-2018 IPR036551 Flavin prenyltransferase-like GO:0003824 Reactome: R-HSA-196783 GYO_1919 f93f1cf63f7dcc2c370d4534d8126feb 406 Pfam PF04127 DNA / pantothenate metabolism flavoprotein 187 370 2.1E-74 T 14-10-2018 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal KEGG: 00770+6.3.2.5|Reactome: R-HSA-196783 GYO_1919 f93f1cf63f7dcc2c370d4534d8126feb 406 TIGRFAM TIGR00521 coaBC_dfp: phosphopantothenoylcysteine decarboxylase / phosphopantothenate--cysteine ligase 2 395 2.1E-169 T 14-10-2018 IPR005252 Coenzyme A biosynthesis bifunctional protein CoaBC GO:0004632|GO:0004633|GO:0010181|GO:0015937|GO:0015941 KEGG: 00770+4.1.1.36+6.3.2.5|MetaCyc: PWY-7851 GYO_1919 f93f1cf63f7dcc2c370d4534d8126feb 406 Pfam PF02441 Flavoprotein 6 176 1.1E-44 T 14-10-2018 IPR003382 Flavoprotein GO:0003824 Reactome: R-HSA-196783 GYO_1919 f93f1cf63f7dcc2c370d4534d8126feb 406 SUPERFAMILY SSF102645 186 399 1.7E-74 T 14-10-2018 IPR035929 CoaB-like superfamily KEGG: 00770+6.3.2.5|Reactome: R-HSA-196783 GYO_1919 f93f1cf63f7dcc2c370d4534d8126feb 406 SUPERFAMILY SSF52507 2 179 7.98E-62 T 14-10-2018 IPR036551 Flavin prenyltransferase-like GO:0003824 Reactome: R-HSA-196783 GYO_1919 f93f1cf63f7dcc2c370d4534d8126feb 406 Gene3D G3DSA:3.40.50.10300 187 403 2.8E-83 T 14-10-2018 IPR035929 CoaB-like superfamily KEGG: 00770+6.3.2.5|Reactome: R-HSA-196783 GYO_2575 efd5d1ce8b95fa6e9b55a4ed033f253a 338 Gene3D G3DSA:3.40.47.40 1 338 7.5E-161 T 14-10-2018 IPR038369 Stage V sporulation AD superfamily GYO_2575 efd5d1ce8b95fa6e9b55a4ed033f253a 338 SUPERFAMILY SSF53901 57 312 2.88E-17 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 GYO_2575 efd5d1ce8b95fa6e9b55a4ed033f253a 338 PIRSF PIRSF011570 1 335 2.3E-167 T 14-10-2018 IPR010894 Stage V sporulation AD GYO_2575 efd5d1ce8b95fa6e9b55a4ed033f253a 338 TIGRFAM TIGR02845 spore_V_AD: stage V sporulation protein AD 6 332 5.4E-170 T 14-10-2018 IPR010894 Stage V sporulation AD GYO_2575 efd5d1ce8b95fa6e9b55a4ed033f253a 338 Pfam PF07451 Stage V sporulation protein AD (SpoVAD) 5 332 5.4E-154 T 14-10-2018 IPR010894 Stage V sporulation AD GYO_3444 01af94e9cf88f169b2ae1ae6c29f314f 510 ProSitePatterns PS00211 ABC transporters family signature. 141 155 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 GYO_3444 01af94e9cf88f169b2ae1ae6c29f314f 510 Pfam PF00005 ABC transporter 274 429 2.9E-18 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 GYO_3444 01af94e9cf88f169b2ae1ae6c29f314f 510 SUPERFAMILY SSF52540 3 226 5.09E-59 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase GYO_3444 01af94e9cf88f169b2ae1ae6c29f314f 510 Pfam PF00005 ABC transporter 21 169 3.9E-30 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 GYO_3444 01af94e9cf88f169b2ae1ae6c29f314f 510 SMART SM00382 29 217 2.8E-10 T 14-10-2018 IPR003593 AAA+ ATPase domain GYO_3444 01af94e9cf88f169b2ae1ae6c29f314f 510 SUPERFAMILY SSF52540 257 490 8.48E-43 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase GYO_3444 01af94e9cf88f169b2ae1ae6c29f314f 510 Gene3D G3DSA:3.40.50.300 1 236 1.3E-57 T 14-10-2018 GYO_3444 01af94e9cf88f169b2ae1ae6c29f314f 510 Gene3D G3DSA:3.40.50.300 252 495 5.9E-39 T 14-10-2018 GYO_3444 01af94e9cf88f169b2ae1ae6c29f314f 510 ProSitePatterns PS00211 ABC transporters family signature. 402 416 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 GYO_1991 2d35b55cc343eeda3c5d5a13b4e79ba2 89 Pfam PF01313 Bacterial export proteins, family 3 6 77 2.7E-31 T 14-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 GYO_1991 2d35b55cc343eeda3c5d5a13b4e79ba2 89 PIRSF PIRSF004669 1 89 9.0E-36 T 14-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 GYO_1991 2d35b55cc343eeda3c5d5a13b4e79ba2 89 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 18 39 2.0E-25 T 14-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 GYO_1991 2d35b55cc343eeda3c5d5a13b4e79ba2 89 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 39 54 2.0E-25 T 14-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 GYO_1991 2d35b55cc343eeda3c5d5a13b4e79ba2 89 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 54 76 2.0E-25 T 14-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 GYO_1991 2d35b55cc343eeda3c5d5a13b4e79ba2 89 TIGRFAM TIGR01402 fliQ: flagellar biosynthetic protein FliQ 3 87 9.1E-35 T 14-10-2018 IPR006305 Flagellar biosynthesis protein FliQ GO:0016021|GO:0044780 GYO_2570 71bcf091e51525e38d68232fb23a8cf7 290 Pfam PF06207 Protein of unknown function (DUF1002) 35 253 2.6E-79 T 14-10-2018 IPR009343 Protein of unknown function DUF1002 GYO_2288 f960cc951edf5affed254f64417149bc 468 Gene3D G3DSA:3.40.640.10 93 461 1.1E-113 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 GYO_2288 f960cc951edf5affed254f64417149bc 468 SMART SM00345 22 81 4.2E-11 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 GYO_2288 f960cc951edf5affed254f64417149bc 468 SUPERFAMILY SSF46785 11 89 8.59E-20 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily GYO_2288 f960cc951edf5affed254f64417149bc 468 Pfam PF00392 Bacterial regulatory proteins, gntR family 18 81 7.9E-15 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 GYO_2288 f960cc951edf5affed254f64417149bc 468 Gene3D G3DSA:1.10.10.10 5 88 5.8E-21 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily GYO_2288 f960cc951edf5affed254f64417149bc 468 SUPERFAMILY SSF53383 109 466 1.09E-67 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase GYO_3467 1593823320c0f78bceff154cdd854b23 183 Gene3D G3DSA:3.40.50.850 1 183 7.3E-55 T 14-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 GYO_3467 1593823320c0f78bceff154cdd854b23 183 SUPERFAMILY SSF52499 2 181 2.88E-52 T 14-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 GYO_3467 1593823320c0f78bceff154cdd854b23 183 Pfam PF00857 Isochorismatase family 4 181 3.4E-38 T 14-10-2018 IPR000868 Isochorismatase-like GO:0003824 GYO_0949 9b920e6e8f60708cca4bfda37030e9b7 282 SUPERFAMILY SSF51735 4 277 1.02E-45 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily GYO_0949 9b920e6e8f60708cca4bfda37030e9b7 282 Gene3D G3DSA:3.40.50.720 8 262 2.3E-58 T 14-10-2018 GYO_0949 9b920e6e8f60708cca4bfda37030e9b7 282 Gene3D G3DSA:3.90.25.10 130 264 2.3E-58 T 14-10-2018 GYO_0949 9b920e6e8f60708cca4bfda37030e9b7 282 Pfam PF01370 NAD dependent epimerase/dehydratase family 7 73 2.3E-7 T 14-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 GYO_0949 9b920e6e8f60708cca4bfda37030e9b7 282 Pfam PF05368 NmrA-like family 126 214 5.3E-5 T 14-10-2018 IPR008030 NmrA-like domain Reactome: R-HSA-70635 GYO_3022 6aea906d5a3adcf44dfc92ac651b3f0d 240 Gene3D G3DSA:3.30.70.980 134 204 5.2E-56 T 14-10-2018 IPR026564 Transcriptional regulator TACO1-like, domain 3 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 GYO_3022 6aea906d5a3adcf44dfc92ac651b3f0d 240 Pfam PF01709 Transcriptional regulator 5 237 1.1E-97 T 14-10-2018 IPR002876 Transcriptional regulator TACO1-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 GYO_3022 6aea906d5a3adcf44dfc92ac651b3f0d 240 Hamap MF_00693 Probable transcriptional regulatory protein YebC [yebC]. 3 240 37.599 T 14-10-2018 IPR002876 Transcriptional regulator TACO1-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 GYO_3022 6aea906d5a3adcf44dfc92ac651b3f0d 240 Gene3D G3DSA:1.10.10.200 1 80 3.3E-34 T 14-10-2018 IPR017856 Integrase-like, N-terminal GYO_3022 6aea906d5a3adcf44dfc92ac651b3f0d 240 SUPERFAMILY SSF75625 3 238 3.27E-93 T 14-10-2018 IPR029072 YebC-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 GYO_3022 6aea906d5a3adcf44dfc92ac651b3f0d 240 TIGRFAM TIGR01033 TIGR01033: DNA-binding regulatory protein, YebC/PmpR family 1 238 3.1E-107 T 14-10-2018 IPR002876 Transcriptional regulator TACO1-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 GYO_3022 6aea906d5a3adcf44dfc92ac651b3f0d 240 Gene3D G3DSA:3.30.70.980 85 237 5.2E-56 T 14-10-2018 IPR026564 Transcriptional regulator TACO1-like, domain 3 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 GYO_1983 673a1464b9b6d297975be194b2984531 264 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 11 31 - T 14-10-2018 IPR019776 Flagellar basal body rod protein, conserved site GYO_1983 673a1464b9b6d297975be194b2984531 264 TIGRFAM TIGR02490 flgF: flagellar basal-body rod protein FlgF 5 243 6.7E-59 T 14-10-2018 IPR012836 Flagellar basal-body rod FlgF GO:0030694|GO:0071973 GYO_1983 673a1464b9b6d297975be194b2984531 264 SUPERFAMILY SSF117143 92 224 4.71E-36 T 14-10-2018 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like GYO_1983 673a1464b9b6d297975be194b2984531 264 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 184 262 1.3E-24 T 14-10-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain GYO_1983 673a1464b9b6d297975be194b2984531 264 Pfam PF00460 Flagella basal body rod protein 5 35 4.0E-13 T 14-10-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 GYO_1983 673a1464b9b6d297975be194b2984531 264 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 3 134 1.1E-41 T 14-10-2018 IPR020013 Flagellar hook-basal body protein, FlgE/F/G GYO_1983 673a1464b9b6d297975be194b2984531 264 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 148 245 1.7E-32 T 14-10-2018 IPR020013 Flagellar hook-basal body protein, FlgE/F/G GYO_2482 32d155fcb823a5709ecc2361c7e4ae1f 224 PIRSF PIRSF000032 2 224 5.3E-104 T 14-10-2018 GYO_2482 32d155fcb823a5709ecc2361c7e4ae1f 224 Pfam PF00033 Cytochrome b/b6/petB 40 219 7.7E-49 T 14-10-2018 IPR005797 Cytochrome b/b6, N-terminal GO:0009055|GO:0016020|GO:0016491 Reactome: R-HSA-611105 GYO_2482 32d155fcb823a5709ecc2361c7e4ae1f 224 SUPERFAMILY SSF81342 6 224 4.26E-61 T 14-10-2018 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 Reactome: R-HSA-611105 GYO_2482 32d155fcb823a5709ecc2361c7e4ae1f 224 Gene3D G3DSA:1.20.810.10 1 224 3.5E-89 T 14-10-2018 IPR027387 Cytochrome b/b6-like domain superfamily Reactome: R-HSA-611105 GYO_0594 6866ad2df52c14fe49ecfc72fe32acfc 40 ProDom PD048351 COMPETENCE SPORULATION FACTOR PHOSPHATASE INHIBITOR RAPC REGULATOR C PHRC 1 40 2.0E-7 T 14-10-2018 IPR020243 Phosphatase RapC inhibitor, PhrC GYO_0594 6866ad2df52c14fe49ecfc72fe32acfc 40 Pfam PF11131 Rap-phr extracellular signalling 3 40 7.0E-27 T 14-10-2018 IPR025899 Phosphatase RapC/F inhibitor, PhrC/F GYO_0762 f669341a2e67009180002098bbff6dda 139 TIGRFAM TIGR02691 arsC_pI258_fam: arsenate reductase (thioredoxin) 6 134 1.9E-73 T 14-10-2018 IPR014064 Arsenate reductase ArsC GO:0004725|GO:0030612|GO:0046685 GYO_0762 f669341a2e67009180002098bbff6dda 139 Gene3D G3DSA:3.40.50.2300 1 139 1.8E-60 T 14-10-2018 GYO_0762 f669341a2e67009180002098bbff6dda 139 Hamap MF_01624 Arsenate reductase [arsC]. 1 137 46.744 T 14-10-2018 IPR014064 Arsenate reductase ArsC GO:0004725|GO:0030612|GO:0046685 GYO_0762 f669341a2e67009180002098bbff6dda 139 SUPERFAMILY SSF52788 4 136 1.09E-46 T 14-10-2018 IPR036196 Phosphotyrosine protein phosphatase I superfamily GYO_0762 f669341a2e67009180002098bbff6dda 139 Pfam PF01451 Low molecular weight phosphotyrosine protein phosphatase 6 135 1.6E-25 T 14-10-2018 IPR023485 Phosphotyrosine protein phosphatase I GYO_0762 f669341a2e67009180002098bbff6dda 139 SMART SM00226 4 137 2.3E-65 T 14-10-2018 IPR023485 Phosphotyrosine protein phosphatase I GYO_1844 aacb77a61a317ce3710efa62abeb3856 149 SUPERFAMILY SSF158622 4 126 3.66E-35 T 14-10-2018 IPR023378 YheA/YmcA-like domain superfamily GYO_1844 aacb77a61a317ce3710efa62abeb3856 149 Gene3D G3DSA:1.20.1500.10 3 126 3.7E-30 T 14-10-2018 IPR023378 YheA/YmcA-like domain superfamily GYO_1844 aacb77a61a317ce3710efa62abeb3856 149 Pfam PF06133 Control of competence regulator ComK, YlbF/YmcA 12 115 3.2E-22 T 14-10-2018 IPR010368 Control of competence regulator ComK, YlbF/YmcA GYO_3921 57f716f71b8e4354dff790e35b8037b7 506 SUPERFAMILY SSF53756 214 503 4.93E-52 T 14-10-2018 GYO_3921 57f716f71b8e4354dff790e35b8037b7 506 Pfam PF00534 Glycosyl transferases group 1 327 483 8.4E-35 T 14-10-2018 IPR001296 Glycosyl transferase, family 1 GYO_3921 57f716f71b8e4354dff790e35b8037b7 506 Gene3D G3DSA:3.40.50.2000 1 164 5.9E-26 T 14-10-2018 GYO_3921 57f716f71b8e4354dff790e35b8037b7 506 Gene3D G3DSA:3.40.50.2000 192 333 1.9E-36 T 14-10-2018 GYO_3921 57f716f71b8e4354dff790e35b8037b7 506 Gene3D G3DSA:3.40.50.2000 334 494 1.7E-33 T 14-10-2018 GYO_1926 488a00c1e25129d59a35a9bc7df33e1f 363 Hamap MF_01849 Dual-specificity RNA methyltransferase RlmN [rlmN]. 17 359 73.374 T 14-10-2018 IPR027492 Dual-specificity RNA methyltransferase RlmN GO:0030488|GO:0070475 GYO_1926 488a00c1e25129d59a35a9bc7df33e1f 363 PIRSF PIRSF006004 8 363 6.1E-141 T 14-10-2018 IPR004383 Ribosomal RNA large subunit methyltransferase RlmN/Cfr GO:0005737|GO:0006364|GO:0008173 GYO_1926 488a00c1e25129d59a35a9bc7df33e1f 363 TIGRFAM TIGR00048 rRNA_mod_RlmN: 23S rRNA (adenine(2503)-C(2))-methyltransferase 14 363 1.2E-175 T 14-10-2018 IPR027492 Dual-specificity RNA methyltransferase RlmN GO:0030488|GO:0070475 GYO_1926 488a00c1e25129d59a35a9bc7df33e1f 363 SUPERFAMILY SSF102114 112 323 2.49E-13 T 14-10-2018 GYO_1926 488a00c1e25129d59a35a9bc7df33e1f 363 Gene3D G3DSA:3.20.20.70 81 344 9.4E-100 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 GYO_1926 488a00c1e25129d59a35a9bc7df33e1f 363 Gene3D G3DSA:1.10.150.530 17 77 1.2E-22 T 14-10-2018 GYO_1926 488a00c1e25129d59a35a9bc7df33e1f 363 Pfam PF13394 4Fe-4S single cluster domain 125 230 3.1E-6 T 14-10-2018 GYO_1926 488a00c1e25129d59a35a9bc7df33e1f 363 Pfam PF04055 Radical SAM superfamily 120 293 6.7E-18 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 GYO_1307 933ba1d0186850615787ecd4ef2b8eed 353 Gene3D G3DSA:3.20.20.210 1 353 8.9E-154 T 14-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 GYO_1307 933ba1d0186850615787ecd4ef2b8eed 353 SUPERFAMILY SSF51726 5 345 7.33E-104 T 14-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 GYO_1307 933ba1d0186850615787ecd4ef2b8eed 353 ProSitePatterns PS00907 Uroporphyrinogen decarboxylase signature 2. 142 158 - T 14-10-2018 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 GYO_1307 933ba1d0186850615787ecd4ef2b8eed 353 ProSitePatterns PS00906 Uroporphyrinogen decarboxylase signature 1. 24 33 - T 14-10-2018 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 GYO_1307 933ba1d0186850615787ecd4ef2b8eed 353 Hamap MF_00218 Uroporphyrinogen decarboxylase [hemE]. 8 344 46.898 T 14-10-2018 IPR006361 Uroporphyrinogen decarboxylase HemE GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 GYO_1307 933ba1d0186850615787ecd4ef2b8eed 353 Pfam PF01208 Uroporphyrinogen decarboxylase (URO-D) 7 343 2.7E-122 T 14-10-2018 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 GYO_1307 933ba1d0186850615787ecd4ef2b8eed 353 TIGRFAM TIGR01464 hemE: uroporphyrinogen decarboxylase 10 342 7.5E-127 T 14-10-2018 IPR006361 Uroporphyrinogen decarboxylase HemE GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 GYO_4152 d8ab9660222475a360a274de71d29b5e 323 SUPERFAMILY SSF53659 6 322 3.91E-95 T 14-10-2018 GYO_4152 d8ab9660222475a360a274de71d29b5e 323 Gene3D G3DSA:3.40.50.10950 18 319 3.7E-136 T 14-10-2018 GYO_4152 d8ab9660222475a360a274de71d29b5e 323 Pfam PF01515 Phosphate acetyl/butaryl transferase 5 319 1.2E-133 T 14-10-2018 IPR002505 Phosphate acetyl/butaryl transferase GO:0016746 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 GYO_4152 d8ab9660222475a360a274de71d29b5e 323 TIGRFAM TIGR00651 pta: phosphate acetyltransferase 19 319 1.9E-136 T 14-10-2018 IPR004614 Phosphate acetyltransferase GO:0016407 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 GYO_4152 d8ab9660222475a360a274de71d29b5e 323 Gene3D G3DSA:3.40.50.10750 142 295 3.7E-136 T 14-10-2018 GYO_4152 d8ab9660222475a360a274de71d29b5e 323 PIRSF PIRSF000428 1 323 3.2E-113 T 14-10-2018 IPR012147 Phosphate acetyl/butyryltransferase GO:0016746 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 GYO_3515 56980fb85f95afa885496fee56849f65 78 Gene3D G3DSA:3.30.300.130 1 78 1.8E-32 T 14-10-2018 IPR034904 Fe-S cluster assembly domain superfamily GYO_3515 56980fb85f95afa885496fee56849f65 78 Pfam PF01106 NifU-like domain 10 75 3.8E-28 T 14-10-2018 IPR001075 NIF system FeS cluster assembly, NifU, C-terminal GO:0005506|GO:0016226|GO:0051536 GYO_3515 56980fb85f95afa885496fee56849f65 78 ProDom PD002830 NIFU NIFU NITROGEN-FIXING C-TERMINAL FIXATION NITROGEN NIFU-LIKE DOMAIN CLUSTER HESB/YADR/YFHF:NITROGEN-FIXING 14 65 9.0E-23 T 14-10-2018 IPR001075 NIF system FeS cluster assembly, NifU, C-terminal GO:0005506|GO:0016226|GO:0051536 GYO_3515 56980fb85f95afa885496fee56849f65 78 SUPERFAMILY SSF117916 2 77 1.14E-26 T 14-10-2018 IPR034904 Fe-S cluster assembly domain superfamily GYO_2502 a743d4b8cb1de69e9850e1caf0f0f292 320 TIGRFAM TIGR02748 GerC3_HepT: heptaprenyl diphosphate synthase component II 2 320 5.5E-175 T 14-10-2018 IPR014119 Heptaprenyl diphosphate synthase component II KEGG: 00900+2.5.1.30|MetaCyc: PWY-5807 GYO_2502 a743d4b8cb1de69e9850e1caf0f0f292 320 Pfam PF00348 Polyprenyl synthetase 31 269 2.7E-68 T 14-10-2018 IPR000092 Polyprenyl synthetase GO:0008299 GYO_2502 a743d4b8cb1de69e9850e1caf0f0f292 320 SUPERFAMILY SSF48576 7 319 3.6E-88 T 14-10-2018 IPR008949 Isoprenoid synthase domain superfamily GYO_2502 a743d4b8cb1de69e9850e1caf0f0f292 320 Gene3D G3DSA:1.10.600.10 7 320 8.6E-100 T 14-10-2018 IPR008949 Isoprenoid synthase domain superfamily GYO_2502 a743d4b8cb1de69e9850e1caf0f0f292 320 ProSitePatterns PS00444 Polyprenyl synthases signature 2. 203 215 - T 14-10-2018 IPR033749 Polyprenyl synthetase, conserved site GYO_2502 a743d4b8cb1de69e9850e1caf0f0f292 320 ProSitePatterns PS00723 Polyprenyl synthases signature 1. 81 95 - T 14-10-2018 IPR033749 Polyprenyl synthetase, conserved site GYO_3031 4850c9aaae0f3a42cd3272cff039283c 147 Pfam PF01842 ACT domain 70 134 4.3E-9 T 14-10-2018 IPR002912 ACT domain GYO_3031 4850c9aaae0f3a42cd3272cff039283c 147 Hamap MF_00707 UPF0735 ACT domain-containing protein . 2 146 32.181 T 14-10-2018 IPR008310 UPF0735 ACT domain-containing protein GYO_3031 4850c9aaae0f3a42cd3272cff039283c 147 Gene3D G3DSA:3.30.70.260 67 143 1.3E-7 T 14-10-2018 GYO_3031 4850c9aaae0f3a42cd3272cff039283c 147 PIRSF PIRSF025624 1 146 1.3E-63 T 14-10-2018 IPR008310 UPF0735 ACT domain-containing protein GYO_3031 4850c9aaae0f3a42cd3272cff039283c 147 SUPERFAMILY SSF55021 70 143 4.82E-11 T 14-10-2018 GYO_3818 edc25bc6ce4e2fd8b332d7493147c189 589 Gene3D G3DSA:3.40.50.300 327 579 8.3E-86 T 14-10-2018 GYO_3818 edc25bc6ce4e2fd8b332d7493147c189 589 SMART SM00382 366 553 2.7E-16 T 14-10-2018 IPR003593 AAA+ ATPase domain GYO_3818 edc25bc6ce4e2fd8b332d7493147c189 589 SUPERFAMILY SSF90123 13 326 5.89E-72 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 GYO_3818 edc25bc6ce4e2fd8b332d7493147c189 589 ProSitePatterns PS00211 ABC transporters family signature. 479 493 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 GYO_3818 edc25bc6ce4e2fd8b332d7493147c189 589 Pfam PF00005 ABC transporter 357 507 1.7E-33 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 GYO_3818 edc25bc6ce4e2fd8b332d7493147c189 589 SUPERFAMILY SSF52540 336 577 6.81E-86 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase GYO_3818 edc25bc6ce4e2fd8b332d7493147c189 589 Gene3D G3DSA:1.20.1560.10 1 326 1.7E-79 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 GYO_3818 edc25bc6ce4e2fd8b332d7493147c189 589 Pfam PF00664 ABC transporter transmembrane region 30 297 2.2E-44 T 14-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 GYO_4323 87006446f3394a70132faae3f6b292a0 111 Gene3D G3DSA:1.10.10.10 10 109 2.8E-18 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily GYO_4323 87006446f3394a70132faae3f6b292a0 111 SUPERFAMILY SSF46785 7 91 1.6E-17 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily GYO_4323 87006446f3394a70132faae3f6b292a0 111 Pfam PF03551 Transcriptional regulator PadR-like family 21 88 5.6E-15 T 14-10-2018 IPR005149 Transcription regulator PadR, N-terminal GYO_3646 2a3538a7ce1f1c05323340923053c31d 160 PIRSF PIRSF030780 1 157 2.3E-19 T 14-10-2018 IPR016956 Inner membrane protein YdjM GYO_3646 2a3538a7ce1f1c05323340923053c31d 160 Pfam PF04307 LexA-binding, inner membrane-associated putative hydrolase 1 151 2.3E-32 T 14-10-2018 IPR007404 LexA-binding, inner membrane-associated putative hydrolase GYO_4216 87bc10e8c089b007380c76c828074a03 52 Pfam PF08671 Anti-repressor SinI 9 35 1.9E-12 T 14-10-2018 IPR010981 SinR repressor/SinI anti-repressor, dimerisation domain GO:0006355|GO:0046983 GYO_4216 87bc10e8c089b007380c76c828074a03 52 SUPERFAMILY SSF47406 8 36 1.16E-6 T 14-10-2018 IPR036281 SinR repressor/SinI anti-repressor, dimerisation domain superfamily GO:0006355|GO:0046983 GYO_0111 ed081ae34b06eafd95b8f5f0a14e3c46 363 SUPERFAMILY SSF55931 3 268 9.53E-90 T 14-10-2018 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 GYO_0111 ed081ae34b06eafd95b8f5f0a14e3c46 363 Pfam PF00217 ATP:guanido phosphotransferase, C-terminal catalytic domain 53 253 1.7E-74 T 14-10-2018 IPR022414 ATP:guanido phosphotransferase, catalytic domain GO:0016301|GO:0016772 Reactome: R-HSA-71288 GYO_0111 ed081ae34b06eafd95b8f5f0a14e3c46 363 Hamap MF_00602 Protein-arginine kinase [mcsB]. 13 350 41.057 T 14-10-2018 IPR023660 Protein arginine kinase GO:0016775 GYO_0111 ed081ae34b06eafd95b8f5f0a14e3c46 363 Gene3D G3DSA:3.30.590.10 8 263 5.2E-73 T 14-10-2018 GYO_0111 ed081ae34b06eafd95b8f5f0a14e3c46 363 ProSitePatterns PS00112 Phosphagen kinase active site signature. 167 173 - T 14-10-2018 IPR022415 ATP:guanido phosphotransferase active site GO:0016301|GO:0016772 Reactome: R-HSA-71288 GYO_3975 b160fc26088eac48761cf662f195cc72 238 Hamap MF_00801 Endonuclease V [nfi]. 13 233 31.406 T 14-10-2018 IPR007581 Endonuclease V GO:0004519|GO:0006281 GYO_3975 b160fc26088eac48761cf662f195cc72 238 Pfam PF04493 Endonuclease V 23 223 4.8E-58 T 14-10-2018 IPR007581 Endonuclease V GO:0004519|GO:0006281 GYO_3975 b160fc26088eac48761cf662f195cc72 238 Gene3D G3DSA:3.30.2170.10 1 238 2.0E-81 T 14-10-2018 GYO_1548 f3ac6573fd35dfe461436cb4c6dccfe8 497 SMART SM00858 11 82 5.5E-16 T 14-10-2018 IPR013974 SAF domain Reactome: R-HSA-4085001 GYO_1548 f3ac6573fd35dfe461436cb4c6dccfe8 497 Pfam PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus 107 496 6.1E-156 T 14-10-2018 IPR007392 D-galactarate/Altronate dehydratase, C-terminal GO:0016829 GYO_1548 f3ac6573fd35dfe461436cb4c6dccfe8 497 Gene3D G3DSA:3.90.1210.30 3 85 1.9E-30 T 14-10-2018 GYO_1548 f3ac6573fd35dfe461436cb4c6dccfe8 497 Pfam PF08666 SAF domain 11 81 1.3E-15 T 14-10-2018 IPR013974 SAF domain Reactome: R-HSA-4085001 GYO_1973 2341f232120a26d5430a7b803b67b6eb 150 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 13 33 - T 14-10-2018 IPR019776 Flagellar basal body rod protein, conserved site GYO_1973 2341f232120a26d5430a7b803b67b6eb 150 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 99 147 5.0E-11 T 14-10-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain GYO_1973 2341f232120a26d5430a7b803b67b6eb 150 TIGRFAM TIGR01395 FlgC: flagellar basal-body rod protein FlgC 4 150 4.3E-54 T 14-10-2018 IPR006299 Flagellar basal-body rod protein FlgC GO:0030694|GO:0071973 GYO_1973 2341f232120a26d5430a7b803b67b6eb 150 Pfam PF00460 Flagella basal body rod protein 7 37 3.6E-12 T 14-10-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 GYO_4420 91baf210b210d974ab8014836350fe3e 236 SMART SM00345 7 66 2.1E-12 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 GYO_4420 91baf210b210d974ab8014836350fe3e 236 SUPERFAMILY SSF64288 76 230 7.22E-40 T 14-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily GYO_4420 91baf210b210d974ab8014836350fe3e 236 Gene3D G3DSA:1.10.10.10 1 70 1.2E-20 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily GYO_4420 91baf210b210d974ab8014836350fe3e 236 SMART SM00866 87 226 5.2E-30 T 14-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 GYO_4420 91baf210b210d974ab8014836350fe3e 236 Pfam PF07702 UTRA domain 90 221 8.1E-27 T 14-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 GYO_4420 91baf210b210d974ab8014836350fe3e 236 Gene3D G3DSA:3.40.1410.10 71 236 4.9E-42 T 14-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily GYO_4420 91baf210b210d974ab8014836350fe3e 236 SUPERFAMILY SSF46785 5 75 3.86E-16 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily GYO_4420 91baf210b210d974ab8014836350fe3e 236 Pfam PF00392 Bacterial regulatory proteins, gntR family 3 66 8.7E-16 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 GYO_4256 32089102d3ce09b89142f423bdd02f0a 363 Gene3D G3DSA:3.20.10.10 171 339 5.0E-139 T 14-10-2018 GYO_4256 32089102d3ce09b89142f423bdd02f0a 363 Gene3D G3DSA:3.30.470.10 25 352 5.0E-139 T 14-10-2018 GYO_4256 32089102d3ce09b89142f423bdd02f0a 363 TIGRFAM TIGR01123 ilvE_II: branched-chain amino acid aminotransferase 44 356 4.7E-124 T 14-10-2018 IPR005786 Branched-chain amino acid aminotransferase II GO:0004084|GO:0009081 KEGG: 00270+2.6.1.42|KEGG: 00280+2.6.1.42|KEGG: 00290+2.6.1.42|KEGG: 00770+2.6.1.42|KEGG: 00966+2.6.1.42|MetaCyc: PWY-5057|MetaCyc: PWY-5076|MetaCyc: PWY-5078|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5108|MetaCyc: PWY-7767|Reactome: R-HSA-70895 GYO_4256 32089102d3ce09b89142f423bdd02f0a 363 ProSitePatterns PS00770 Aminotransferases class-IV signature. 233 262 - T 14-10-2018 IPR018300 Aminotransferase, class IV, conserved site GO:0003824 Reactome: R-HSA-70895 GYO_4256 32089102d3ce09b89142f423bdd02f0a 363 Pfam PF01063 Amino-transferase class IV 70 312 1.3E-35 T 14-10-2018 IPR001544 Aminotransferase class IV GO:0003824 Reactome: R-HSA-70895 GYO_4256 32089102d3ce09b89142f423bdd02f0a 363 SUPERFAMILY SSF56752 4 353 1.83E-117 T 14-10-2018 IPR036038 Aminotransferase-like, PLP-dependent enzymes GO:0003824 Reactome: R-HSA-70895 GYO_4256 32089102d3ce09b89142f423bdd02f0a 363 PIRSF PIRSF006468 1 358 2.2E-138 T 14-10-2018 IPR005786 Branched-chain amino acid aminotransferase II GO:0004084|GO:0009081 KEGG: 00270+2.6.1.42|KEGG: 00280+2.6.1.42|KEGG: 00290+2.6.1.42|KEGG: 00770+2.6.1.42|KEGG: 00966+2.6.1.42|MetaCyc: PWY-5057|MetaCyc: PWY-5076|MetaCyc: PWY-5078|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5108|MetaCyc: PWY-7767|Reactome: R-HSA-70895 GYO_1776 881bd9341143a45ee34a6c57e699af5e 634 Gene3D G3DSA:3.40.930.10 1 156 2.3E-48 T 14-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 GYO_1776 881bd9341143a45ee34a6c57e699af5e 634 SUPERFAMILY SSF55804 2 148 2.62E-44 T 14-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 GYO_1776 881bd9341143a45ee34a6c57e699af5e 634 TIGRFAM TIGR01427 PTS_IIC_fructo: PTS system, Fru family, IIC component 299 628 2.3E-125 T 14-10-2018 IPR006327 Phosphotransferase system, fructose IIC component GO:0005351|GO:0008982|GO:0009401|GO:0016021 GYO_1776 881bd9341143a45ee34a6c57e699af5e 634 ProSitePatterns PS00372 PTS EIIA domains phosphorylation site signature 2. 52 68 - T 14-10-2018 IPR002178 PTS EIIA type-2 domain GYO_1776 881bd9341143a45ee34a6c57e699af5e 634 TIGRFAM TIGR00848 fruA: PTS system, fructose subfamily, IIA component 6 133 1.5E-39 T 14-10-2018 IPR004715 Phosphotransferase system, IIA component fructose subfamily GO:0008982|GO:0009401|GO:0016021 GYO_1776 881bd9341143a45ee34a6c57e699af5e 634 SUPERFAMILY SSF52794 171 273 5.06E-38 T 14-10-2018 IPR036095 PTS system IIB component-like superfamily GO:0008982|GO:0009401 GYO_1776 881bd9341143a45ee34a6c57e699af5e 634 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 5 148 2.8E-40 T 14-10-2018 IPR002178 PTS EIIA type-2 domain GYO_1776 881bd9341143a45ee34a6c57e699af5e 634 Gene3D G3DSA:3.40.50.2300 169 273 4.7E-43 T 14-10-2018 GYO_1776 881bd9341143a45ee34a6c57e699af5e 634 TIGRFAM TIGR00829 FRU: PTS system, Fru family, IIB component 174 255 5.3E-31 T 14-10-2018 IPR003353 Phosphotransferase system, fructose-specific IIB subunit GO:0009401|GO:0022877 KEGG: 00051+2.7.1.202 GYO_1776 881bd9341143a45ee34a6c57e699af5e 634 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 174 263 6.1E-18 T 14-10-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 GYO_0901 1596b8ea1a083e804d8b8d05be19e6ba 65 Pfam PF14044 NETI protein 8 63 1.2E-27 T 14-10-2018 IPR025930 NETI protein GYO_3546 36ed65c1402052dad9a6c94bf525d49d 745 Gene3D G3DSA:3.30.365.10 437 593 7.8E-83 T 14-10-2018 GYO_3546 36ed65c1402052dad9a6c94bf525d49d 745 TIGRFAM TIGR03196 pucD: xanthine dehydrogenase D subunit 1 733 0.0 T 14-10-2018 IPR017609 Xanthine dehydrogenase D subunit KEGG: 00230+1.17.1.4|MetaCyc: PWY-5497|MetaCyc: PWY-5695|MetaCyc: PWY-6538|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-6999 GYO_3546 36ed65c1402052dad9a6c94bf525d49d 745 Gene3D G3DSA:3.30.365.10 16 272 1.0E-117 T 14-10-2018 GYO_3546 36ed65c1402052dad9a6c94bf525d49d 745 Pfam PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase 141 677 1.8E-138 T 14-10-2018 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 GYO_3546 36ed65c1402052dad9a6c94bf525d49d 745 Gene3D G3DSA:3.30.365.10 125 348 1.0E-117 T 14-10-2018 GYO_3546 36ed65c1402052dad9a6c94bf525d49d 745 Pfam PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain 18 124 4.7E-34 T 14-10-2018 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead GYO_3546 36ed65c1402052dad9a6c94bf525d49d 745 SUPERFAMILY SSF54665 7 143 6.15E-42 T 14-10-2018 IPR036856 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead superfamily GYO_3546 36ed65c1402052dad9a6c94bf525d49d 745 SMART SM01008 18 124 3.0E-53 T 14-10-2018 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead GYO_3546 36ed65c1402052dad9a6c94bf525d49d 745 Gene3D G3DSA:3.30.365.10 359 731 7.8E-83 T 14-10-2018 GYO_3546 36ed65c1402052dad9a6c94bf525d49d 745 SUPERFAMILY SSF56003 128 737 9.55E-160 T 14-10-2018 IPR037165 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding domain superfamily GO:0016491|GO:0055114 GYO_3546 36ed65c1402052dad9a6c94bf525d49d 745 Gene3D G3DSA:3.90.1170.50 33 124 1.0E-117 T 14-10-2018 GYO_3107 69b6574c32bd9d4c45dfa476cd254bc9 177 Pfam PF02674 Colicin V production protein 2 162 5.5E-34 T 14-10-2018 IPR003825 Colicin V production, CvpA GO:0009403|GO:0016020 GYO_2522 e249bf5b6a92da4187709150c71fbf83 217 Pfam PF07238 PilZ domain 98 203 6.4E-11 T 14-10-2018 IPR009875 PilZ domain GO:0035438 GYO_2522 e249bf5b6a92da4187709150c71fbf83 217 Gene3D G3DSA:2.40.10.220 92 217 7.0E-8 T 14-10-2018 GYO_2522 e249bf5b6a92da4187709150c71fbf83 217 SUPERFAMILY SSF141371 97 176 5.1E-6 T 14-10-2018 GYO_2522 e249bf5b6a92da4187709150c71fbf83 217 Pfam PF12945 Flagellar protein YcgR 4 89 1.9E-15 T 14-10-2018 IPR009926 Type III secretion system flagellar brake protein YcgR, N-terminal GYO_3801 5c78ee7020c5951573528b44953b66d0 194 SUPERFAMILY SSF53056 5 181 2.22E-42 T 14-10-2018 IPR036874 Carbonic anhydrase superfamily GO:0004089|GO:0008270 GYO_3801 5c78ee7020c5951573528b44953b66d0 194 Pfam PF00484 Carbonic anhydrase 34 178 1.5E-18 T 14-10-2018 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 GYO_3801 5c78ee7020c5951573528b44953b66d0 194 SMART SM00947 26 182 8.5E-39 T 14-10-2018 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 GYO_3801 5c78ee7020c5951573528b44953b66d0 194 Gene3D G3DSA:3.40.1050.10 2 182 7.9E-49 T 14-10-2018 IPR036874 Carbonic anhydrase superfamily GO:0004089|GO:0008270 GYO_2384 32835bbb2a2408937f023e0570c92843 259 Gene3D G3DSA:3.40.630.30 11 252 1.1E-26 T 14-10-2018 GYO_2384 32835bbb2a2408937f023e0570c92843 259 Pfam PF00583 Acetyltransferase (GNAT) family 149 244 4.1E-13 T 14-10-2018 IPR000182 GNAT domain GYO_2384 32835bbb2a2408937f023e0570c92843 259 SUPERFAMILY SSF55729 125 252 2.29E-18 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase GYO_4224 f32a224e7c6cbc9ade0e196b2729ab26 222 Gene3D G3DSA:3.20.20.70 1 222 7.3E-85 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 GYO_4224 f32a224e7c6cbc9ade0e196b2729ab26 222 TIGRFAM TIGR00693 thiE: thiamine-phosphate diphosphorylase 14 210 1.9E-70 T 14-10-2018 IPR034291 Thiamine phosphate synthase GO:0004789|GO:0009228 KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 GYO_4224 f32a224e7c6cbc9ade0e196b2729ab26 222 Pfam PF02581 Thiamine monophosphate synthase 15 198 5.7E-62 T 14-10-2018 IPR022998 Thiamine phosphate synthase/TenI KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 GYO_4224 f32a224e7c6cbc9ade0e196b2729ab26 222 SUPERFAMILY SSF51391 7 219 1.57E-71 T 14-10-2018 IPR036206 Thiamin phosphate synthase superfamily KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 GYO_4224 f32a224e7c6cbc9ade0e196b2729ab26 222 Hamap MF_00097 Thiamine-phosphate synthase [thiE]. 13 216 29.075 T 14-10-2018 IPR034291 Thiamine phosphate synthase GO:0004789|GO:0009228 KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 GYO_0865 3bf58daa40af760bd470545211eab193 244 Pfam PF02517 CAAX protease self-immunity 130 214 3.8E-17 T 14-10-2018 IPR003675 CAAX amino terminal protease GO:0016020 Reactome: R-HSA-5689880 GYO_1794 eda40c067a2cfb540604633f1c3811b8 50 TIGRFAM TIGR01732 tiny_TM_bacill: conserved hypothetical protein 19 45 1.6E-13 T 14-10-2018 IPR010070 Sporulation protein YjcZ-like GYO_1794 eda40c067a2cfb540604633f1c3811b8 50 Pfam PF09680 Protein of unknown function (Tiny_TM_bacill) 22 44 2.7E-13 T 14-10-2018 IPR010070 Sporulation protein YjcZ-like GYO_0928 df4c064bcb005593a8d8f94716a1d644 492 TIGRFAM TIGR02121 Na_Pro_sym: sodium/proline symporter 4 488 5.1E-230 T 14-10-2018 IPR011851 Sodium/proline symporter GO:0005298|GO:0006814|GO:0015824|GO:0016021|GO:0031402 GYO_0928 df4c064bcb005593a8d8f94716a1d644 492 ProSitePatterns PS00457 Sodium:solute symporter family signature 2. 413 433 - T 14-10-2018 IPR018212 Sodium/solute symporter, conserved site GYO_0928 df4c064bcb005593a8d8f94716a1d644 492 ProSitePatterns PS00456 Sodium:solute symporter family signature 1. 155 180 - T 14-10-2018 IPR018212 Sodium/solute symporter, conserved site GYO_0928 df4c064bcb005593a8d8f94716a1d644 492 TIGRFAM TIGR00813 sss: transporter, solute:sodium symporter (SSS) family 33 431 1.2E-93 T 14-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 GYO_0928 df4c064bcb005593a8d8f94716a1d644 492 Gene3D G3DSA:1.20.1730.10 21 490 3.2E-92 T 14-10-2018 IPR038377 Sodium/glucose symporter superfamily GYO_0928 df4c064bcb005593a8d8f94716a1d644 492 Pfam PF00474 Sodium:solute symporter family 33 431 1.7E-106 T 14-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 GYO_2138 56dc2e3ec1427283cd5937b541f05e6b 398 TIGRFAM TIGR00937 2A51: chromate efflux transporter 21 390 2.9E-107 T 14-10-2018 IPR014047 Chromate transporter, long chain GYO_2138 56dc2e3ec1427283cd5937b541f05e6b 398 PIRSF PIRSF004810 1 397 1.1E-126 T 14-10-2018 IPR014047 Chromate transporter, long chain GYO_2138 56dc2e3ec1427283cd5937b541f05e6b 398 Pfam PF02417 Chromate transporter 228 389 6.0E-39 T 14-10-2018 IPR003370 Chromate transporter GO:0015109|GO:0015703 GYO_2138 56dc2e3ec1427283cd5937b541f05e6b 398 Pfam PF02417 Chromate transporter 15 177 5.6E-29 T 14-10-2018 IPR003370 Chromate transporter GO:0015109|GO:0015703 GYO_4140 c6c5b8100e19544cf89836232a6f6c61 139 Pfam PF01047 MarR family 37 92 8.5E-18 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 GYO_4140 c6c5b8100e19544cf89836232a6f6c61 139 SMART SM00347 27 127 3.2E-30 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 GYO_4140 c6c5b8100e19544cf89836232a6f6c61 139 SUPERFAMILY SSF46785 5 138 1.61E-26 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily GYO_4140 c6c5b8100e19544cf89836232a6f6c61 139 Gene3D G3DSA:1.10.10.10 2 139 5.9E-27 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily GYO_4140 c6c5b8100e19544cf89836232a6f6c61 139 PRINTS PR00598 Bacterial regulatory protein MarR family signature 68 83 9.9E-10 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 GYO_4140 c6c5b8100e19544cf89836232a6f6c61 139 PRINTS PR00598 Bacterial regulatory protein MarR family signature 87 103 9.9E-10 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 GYO_4140 c6c5b8100e19544cf89836232a6f6c61 139 PRINTS PR00598 Bacterial regulatory protein MarR family signature 117 137 9.9E-10 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 GYO_0659 2eab09e309bb23f07149bebb675f062d 123 Pfam PF00477 Small hydrophilic plant seed protein 11 63 2.0E-7 T 14-10-2018 IPR038956 Late embryogenesis abundant protein, LEA_5 subgroup GYO_0659 2eab09e309bb23f07149bebb675f062d 123 Pfam PF10685 Stress-induced bacterial acidophilic repeat motif 103 117 1.5E-5 T 14-10-2018 IPR019626 Stress-induced protein, KGG, repeat GYO_0659 2eab09e309bb23f07149bebb675f062d 123 Pfam PF10685 Stress-induced bacterial acidophilic repeat motif 83 100 4.0E-7 T 14-10-2018 IPR019626 Stress-induced protein, KGG, repeat GYO_1142 b0e00cf23da2d532c5491fff355a3068 117 Hamap MF_01502 UPF0295 protein . 1 115 36.744 T 14-10-2018 IPR020912 Uncharacterised protein family UPF0295 GO:0005887 GYO_1142 b0e00cf23da2d532c5491fff355a3068 117 ProDom PD355753 MEMBRANE TRANSMEMBRANE UPF0295 BLI00901/BL05075 BT9727_0449 GK0479 BCE0593 YGZB PRECURSOR BA0538/GBAA0538/BAS0506 1 113 2.0E-48 T 14-10-2018 IPR020912 Uncharacterised protein family UPF0295 GO:0005887 GYO_1142 b0e00cf23da2d532c5491fff355a3068 117 Pfam PF11023 Zinc-ribbon containing domain 3 113 1.6E-59 T 14-10-2018 IPR020912 Uncharacterised protein family UPF0295 GO:0005887 GYO_1559 e86d326cb1f6a87b4c341349dc0a2e89 278 SUPERFAMILY SSF47240 1 275 1.0E-102 T 14-10-2018 IPR009078 Ferritin-like superfamily GYO_1559 e86d326cb1f6a87b4c341349dc0a2e89 278 Gene3D G3DSA:3.30.1530.10 208 272 9.8E-12 T 14-10-2018 IPR027407 Manganese catalase, C-terminal GYO_1559 e86d326cb1f6a87b4c341349dc0a2e89 278 Gene3D G3DSA:1.20.1260.10 1 199 2.0E-75 T 14-10-2018 IPR012347 Ferritin-like GYO_1559 e86d326cb1f6a87b4c341349dc0a2e89 278 Pfam PF05067 Manganese containing catalase 1 272 4.0E-136 T 14-10-2018 IPR007760 Manganese catalase GYO_2858 0de4080c5b4f453f99891d05407d7b2e 496 Pfam PF15657 HNH/Endo VII superfamily nuclease toxins 423 490 6.0E-21 T 14-10-2018 IPR028048 HNH/Endo VII superfamily nuclease toxins GYO_2858 0de4080c5b4f453f99891d05407d7b2e 496 Pfam PF04740 LXG domain of WXG superfamily 4 161 1.6E-38 T 14-10-2018 IPR006829 LXG domain GYO_2858 0de4080c5b4f453f99891d05407d7b2e 496 Pfam PF14449 Pre-toxin TG 215 280 6.5E-19 T 14-10-2018 IPR027797 Pre-toxin TG domain GYO_2452 c2bb353cb4906b0c44b54e5f72f24296 62 Pfam PF14178 YppF-like protein 1 58 8.6E-28 T 14-10-2018 IPR025553 YppF-like protein GYO_2452 c2bb353cb4906b0c44b54e5f72f24296 62 ProDom PD968187 BETA-DEFENSIN ANTIBIOTIC PRECURSOR ANTIMICROBIAL DEFENSIN BETA SIGNAL DEFENSIN BD-32 DEFB-32 1 62 3.0E-30 T 14-10-2018 GYO_3185 c312b880ecacaadaf81de112306eccea 255 Gene3D G3DSA:3.40.50.720 1 255 4.5E-66 T 14-10-2018 GYO_3185 c312b880ecacaadaf81de112306eccea 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 155 174 1.3E-28 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR GYO_3185 c312b880ecacaadaf81de112306eccea 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 176 193 1.3E-28 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR GYO_3185 c312b880ecacaadaf81de112306eccea 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 3 20 1.3E-28 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR GYO_3185 c312b880ecacaadaf81de112306eccea 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 210 230 1.3E-28 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR GYO_3185 c312b880ecacaadaf81de112306eccea 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 78 89 1.3E-28 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR GYO_3185 c312b880ecacaadaf81de112306eccea 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 127 143 1.3E-28 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR GYO_3185 c312b880ecacaadaf81de112306eccea 255 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 11 247 4.4E-46 T 14-10-2018 GYO_3185 c312b880ecacaadaf81de112306eccea 255 SUPERFAMILY SSF51735 2 248 3.05E-61 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily GYO_3185 c312b880ecacaadaf81de112306eccea 255 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 78 89 2.4E-5 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR GYO_3185 c312b880ecacaadaf81de112306eccea 255 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 155 174 2.4E-5 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR GYO_2866 3d79468a28824c8bebe9945e4b46ea9a 258 Pfam PF01925 Sulfite exporter TauE/SafE 9 252 1.2E-45 T 14-10-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 GYO_2864 947ac0a2d5fdf59dffa88e513b05b0d2 280 Gene3D G3DSA:3.40.50.1110 1 248 4.3E-87 T 14-10-2018 IPR036514 SGNH hydrolase superfamily GYO_2864 947ac0a2d5fdf59dffa88e513b05b0d2 280 Pfam PF03629 Carbohydrate esterase, sialic acid-specific acetylesterase 5 225 1.3E-52 T 14-10-2018 IPR005181 Sialate O-acetylesterase domain GYO_2864 947ac0a2d5fdf59dffa88e513b05b0d2 280 SUPERFAMILY SSF52266 2 273 1.83E-79 T 14-10-2018 GYO_2864 947ac0a2d5fdf59dffa88e513b05b0d2 280 Gene3D G3DSA:1.10.1200.110 249 279 1.6E-8 T 14-10-2018 GYO_1932 b073a9354aa80ede5b72c87d2ee175ee 62 SUPERFAMILY SSF143800 1 61 3.73E-24 T 14-10-2018 IPR034704 L28p-like Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 GYO_1932 b073a9354aa80ede5b72c87d2ee175ee 62 TIGRFAM TIGR00009 L28: ribosomal protein bL28 1 56 4.8E-23 T 14-10-2018 IPR001383 Ribosomal protein L28 GO:0003735|GO:0005622|GO:0005840|GO:0006412 GYO_1932 b073a9354aa80ede5b72c87d2ee175ee 62 Hamap MF_00373 50S ribosomal protein L28 [rpmB]. 1 62 19.888 T 14-10-2018 IPR001383 Ribosomal protein L28 GO:0003735|GO:0005622|GO:0005840|GO:0006412 GYO_1932 b073a9354aa80ede5b72c87d2ee175ee 62 Gene3D G3DSA:2.30.170.40 19 62 3.4E-18 T 14-10-2018 IPR037147 Ribosomal protein L28/L24 superfamily GO:0003735 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 GYO_1932 b073a9354aa80ede5b72c87d2ee175ee 62 Pfam PF00830 Ribosomal L28 family 3 58 6.7E-21 T 14-10-2018 IPR026569 Ribosomal protein L28/L24 GO:0003735 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 GYO_2911 178dca66103def8eb2e943a69e429421 189 Gene3D G3DSA:2.30.110.10 3 177 8.0E-47 T 14-10-2018 IPR012349 FMN-binding split barrel GO:0048037 GYO_2911 178dca66103def8eb2e943a69e429421 189 SUPERFAMILY SSF50475 9 173 6.38E-37 T 14-10-2018 GYO_2911 178dca66103def8eb2e943a69e429421 189 SMART SM00903 12 150 7.9E-11 T 14-10-2018 IPR002563 Flavin reductase like domain GO:0010181 GYO_2911 178dca66103def8eb2e943a69e429421 189 Pfam PF01613 Flavin reductase like domain 13 144 4.8E-25 T 14-10-2018 IPR002563 Flavin reductase like domain GO:0010181 GYO_2008 e866b749ab341a86e848689e7328b400 260 SUPERFAMILY SSF64005 29 253 2.35E-89 T 14-10-2018 IPR036424 Decaprenyl diphosphate synthase-like superfamily GO:0016765 Reactome: R-HSA-446199 GYO_2008 e866b749ab341a86e848689e7328b400 260 ProSitePatterns PS01066 Undecaprenyl pyrophosphate synthase family signature. 204 221 - T 14-10-2018 IPR018520 Di-trans-poly-cis-decaprenylcistransferase-like, conserved site GO:0016765 Reactome: R-HSA-446199|Reactome: R-HSA-4755609 GYO_2008 e866b749ab341a86e848689e7328b400 260 Hamap MF_01139 Ditrans,polycis-undecaprenyl-diphosphate synthase ((2E,6E)-farnesyl-diphosphate specific) [uppS]. 31 259 40.746 T 14-10-2018 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 GYO_2008 e866b749ab341a86e848689e7328b400 260 Pfam PF01255 Putative undecaprenyl diphosphate synthase 38 258 3.5E-84 T 14-10-2018 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 GYO_2008 e866b749ab341a86e848689e7328b400 260 TIGRFAM TIGR00055 uppS: di-trans,poly-cis-decaprenylcistransferase 31 258 2.5E-88 T 14-10-2018 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 GYO_2008 e866b749ab341a86e848689e7328b400 260 Gene3D G3DSA:3.40.1180.10 13 260 1.3E-100 T 14-10-2018 IPR036424 Decaprenyl diphosphate synthase-like superfamily GO:0016765 Reactome: R-HSA-446199 GYO_4006 5e88a7d6e69fe2645fa5bce249608f80 333 Pfam PF06723 MreB/Mbl protein 4 327 2.6E-150 T 14-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 GYO_4006 5e88a7d6e69fe2645fa5bce249608f80 333 TIGRFAM TIGR00904 mreB: cell shape determining protein, MreB/Mrl family 2 327 2.3E-137 T 14-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 GYO_4006 5e88a7d6e69fe2645fa5bce249608f80 333 SUPERFAMILY SSF53067 143 325 7.07E-50 T 14-10-2018 GYO_4006 5e88a7d6e69fe2645fa5bce249608f80 333 Gene3D G3DSA:3.30.420.40 6 319 6.0E-128 T 14-10-2018 GYO_4006 5e88a7d6e69fe2645fa5bce249608f80 333 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 41 59 3.9E-59 T 14-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 GYO_4006 5e88a7d6e69fe2645fa5bce249608f80 333 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 124 143 3.9E-59 T 14-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 GYO_4006 5e88a7d6e69fe2645fa5bce249608f80 333 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 61 84 3.9E-59 T 14-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 GYO_4006 5e88a7d6e69fe2645fa5bce249608f80 333 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 179 199 3.9E-59 T 14-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 GYO_4006 5e88a7d6e69fe2645fa5bce249608f80 333 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 292 318 3.9E-59 T 14-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 GYO_4006 5e88a7d6e69fe2645fa5bce249608f80 333 Gene3D G3DSA:3.30.420.40 146 309 6.0E-128 T 14-10-2018 GYO_4006 5e88a7d6e69fe2645fa5bce249608f80 333 Gene3D G3DSA:3.90.640.10 178 251 6.0E-128 T 14-10-2018 GYO_4006 5e88a7d6e69fe2645fa5bce249608f80 333 SUPERFAMILY SSF53067 3 140 2.45E-39 T 14-10-2018 GYO_1471 6b50223b3387697267e42a4b9ae058ae 205 SUPERFAMILY SSF51391 3 199 2.75E-48 T 14-10-2018 IPR036206 Thiamin phosphate synthase superfamily KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 GYO_1471 6b50223b3387697267e42a4b9ae058ae 205 Gene3D G3DSA:3.20.20.70 1 205 5.1E-60 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 GYO_1471 6b50223b3387697267e42a4b9ae058ae 205 Pfam PF02581 Thiamine monophosphate synthase 5 179 8.9E-39 T 14-10-2018 IPR022998 Thiamine phosphate synthase/TenI KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 GYO_1678 588cdf209e3715b40afe7cb914b94b2e 340 Pfam PF01757 Acyltransferase family 7 302 1.6E-23 T 14-10-2018 IPR002656 Acyltransferase 3 GO:0016747 GYO_0892 a4cff78ddb0517d977cc8e8b2fee173f 320 SUPERFAMILY SSF52540 8 285 7.54E-46 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase GYO_0892 a4cff78ddb0517d977cc8e8b2fee173f 320 PIRSF PIRSF002849 2 315 4.2E-133 T 14-10-2018 GYO_0892 a4cff78ddb0517d977cc8e8b2fee173f 320 Gene3D G3DSA:1.10.8.300 202 310 1.8E-36 T 14-10-2018 GYO_0892 a4cff78ddb0517d977cc8e8b2fee173f 320 Gene3D G3DSA:3.40.50.300 22 188 1.9E-46 T 14-10-2018 GYO_0892 a4cff78ddb0517d977cc8e8b2fee173f 320 Pfam PF07726 ATPase family associated with various cellular activities (AAA) 41 171 2.6E-65 T 14-10-2018 IPR011703 ATPase, AAA-3 GO:0005524|GO:0016887 GYO_4208 beb8ac47419c8346795c1c1d3e61e4a2 649 TIGRFAM TIGR02882 QoxB: cytochrome aa3 quinol oxidase, subunit I 4 646 0.0 T 14-10-2018 IPR014233 Quinol oxidase subunit I GO:0005507|GO:0016021|GO:0016682|GO:0020037|GO:0055114 GYO_4208 beb8ac47419c8346795c1c1d3e61e4a2 649 Pfam PF00115 Cytochrome C and Quinol oxidase polypeptide I 55 501 1.7E-147 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 GYO_4208 beb8ac47419c8346795c1c1d3e61e4a2 649 ProSitePatterns PS00077 Heme-copper oxidase catalytic subunit, copper B binding region signature. 276 330 - T 14-10-2018 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 GYO_4208 beb8ac47419c8346795c1c1d3e61e4a2 649 PRINTS PR01165 Cytochrome c oxidase subunit I signature 274 295 2.1E-102 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 GYO_4208 beb8ac47419c8346795c1c1d3e61e4a2 649 PRINTS PR01165 Cytochrome c oxidase subunit I signature 457 478 2.1E-102 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 GYO_4208 beb8ac47419c8346795c1c1d3e61e4a2 649 PRINTS PR01165 Cytochrome c oxidase subunit I signature 320 335 2.1E-102 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 GYO_4208 beb8ac47419c8346795c1c1d3e61e4a2 649 PRINTS PR01165 Cytochrome c oxidase subunit I signature 379 397 2.1E-102 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 GYO_4208 beb8ac47419c8346795c1c1d3e61e4a2 649 PRINTS PR01165 Cytochrome c oxidase subunit I signature 162 174 2.1E-102 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 GYO_4208 beb8ac47419c8346795c1c1d3e61e4a2 649 PRINTS PR01165 Cytochrome c oxidase subunit I signature 120 144 2.1E-102 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 GYO_4208 beb8ac47419c8346795c1c1d3e61e4a2 649 PRINTS PR01165 Cytochrome c oxidase subunit I signature 194 212 2.1E-102 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 GYO_4208 beb8ac47419c8346795c1c1d3e61e4a2 649 PRINTS PR01165 Cytochrome c oxidase subunit I signature 46 71 2.1E-102 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 GYO_4208 beb8ac47419c8346795c1c1d3e61e4a2 649 PRINTS PR01165 Cytochrome c oxidase subunit I signature 344 365 2.1E-102 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 GYO_4208 beb8ac47419c8346795c1c1d3e61e4a2 649 PRINTS PR01165 Cytochrome c oxidase subunit I signature 407 426 2.1E-102 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 GYO_4208 beb8ac47419c8346795c1c1d3e61e4a2 649 PRINTS PR01165 Cytochrome c oxidase subunit I signature 93 116 2.1E-102 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 GYO_4208 beb8ac47419c8346795c1c1d3e61e4a2 649 PRINTS PR01165 Cytochrome c oxidase subunit I signature 223 242 2.1E-102 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 GYO_4208 beb8ac47419c8346795c1c1d3e61e4a2 649 Gene3D G3DSA:1.20.210.10 29 562 7.5E-199 T 14-10-2018 IPR036927 Cytochrome c oxidase-like, subunit I superfamily GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 GYO_4208 beb8ac47419c8346795c1c1d3e61e4a2 649 SUPERFAMILY SSF81442 44 556 9.81E-176 T 14-10-2018 IPR036927 Cytochrome c oxidase-like, subunit I superfamily GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 GYO_2246 a1bd431934e67aa32d77eb21865b2c58 228 Gene3D G3DSA:3.40.50.720 1 227 2.4E-74 T 14-10-2018 GYO_2246 a1bd431934e67aa32d77eb21865b2c58 228 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 110 138 - T 14-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 GYO_2246 a1bd431934e67aa32d77eb21865b2c58 228 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 1 225 8.2E-54 T 14-10-2018 GYO_2246 a1bd431934e67aa32d77eb21865b2c58 228 TIGRFAM TIGR02415 23BDH: acetoin reductases 1 228 2.9E-97 T 14-10-2018 IPR014007 Acetoin reductase GO:0019152|GO:0045150|GO:0055114 KEGG: 00650+1.1.1.304|MetaCyc: PWY-6389 GYO_2246 a1bd431934e67aa32d77eb21865b2c58 228 SUPERFAMILY SSF51735 1 226 4.41E-65 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily GYO_2246 a1bd431934e67aa32d77eb21865b2c58 228 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 123 142 2.6E-13 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR GYO_2246 a1bd431934e67aa32d77eb21865b2c58 228 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 49 60 2.6E-13 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR GYO_2246 a1bd431934e67aa32d77eb21865b2c58 228 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 103 111 2.6E-13 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR GYO_2246 a1bd431934e67aa32d77eb21865b2c58 228 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 123 142 2.1E-31 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR GYO_2246 a1bd431934e67aa32d77eb21865b2c58 228 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 97 113 2.1E-31 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR GYO_2246 a1bd431934e67aa32d77eb21865b2c58 228 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 49 60 2.1E-31 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR GYO_2246 a1bd431934e67aa32d77eb21865b2c58 228 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 144 161 2.1E-31 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR GYO_2246 a1bd431934e67aa32d77eb21865b2c58 228 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 189 209 2.1E-31 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR GYO_3829 aef31863a0b9aef03f01de4e58d93d96 207 Pfam PF01634 ATP phosphoribosyltransferase 48 197 2.9E-50 T 14-10-2018 IPR013820 ATP phosphoribosyltransferase, catalytic domain GO:0000105|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17 GYO_3829 aef31863a0b9aef03f01de4e58d93d96 207 Gene3D G3DSA:3.40.190.10 1 193 7.0E-82 T 14-10-2018 GYO_3829 aef31863a0b9aef03f01de4e58d93d96 207 ProSitePatterns PS01316 ATP phosphoribosyltransferase signature. 137 158 - T 14-10-2018 IPR018198 ATP phosphoribosyltransferase, conserved site GO:0003879 KEGG: 00340+2.4.2.17 GYO_3829 aef31863a0b9aef03f01de4e58d93d96 207 TIGRFAM TIGR00070 hisG: ATP phosphoribosyltransferase 1 178 1.7E-62 T 14-10-2018 IPR013820 ATP phosphoribosyltransferase, catalytic domain GO:0000105|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17 GYO_3829 aef31863a0b9aef03f01de4e58d93d96 207 SUPERFAMILY SSF53850 1 200 4.78E-65 T 14-10-2018 GYO_3829 aef31863a0b9aef03f01de4e58d93d96 207 Hamap MF_01018 ATP phosphoribosyltransferase [hisG]. 1 202 57.174 T 14-10-2018 IPR024893 ATP phosphoribosyltransferase HisG, short form GO:0000105|GO:0003879 KEGG: 00340+2.4.2.17 GYO_3829 aef31863a0b9aef03f01de4e58d93d96 207 Gene3D G3DSA:3.40.190.10 89 170 7.0E-82 T 14-10-2018 GYO_2721 db9be9058558a8634a7bf4a7eddda360 113 Gene3D G3DSA:1.10.260.40 3 113 8.3E-34 T 14-10-2018 GYO_2721 db9be9058558a8634a7bf4a7eddda360 113 SUPERFAMILY SSF47406 76 109 1.05E-12 T 14-10-2018 IPR036281 SinR repressor/SinI anti-repressor, dimerisation domain superfamily GO:0006355|GO:0046983 GYO_2721 db9be9058558a8634a7bf4a7eddda360 113 Pfam PF08671 Anti-repressor SinI 76 103 1.5E-12 T 14-10-2018 IPR010981 SinR repressor/SinI anti-repressor, dimerisation domain GO:0006355|GO:0046983 GYO_2721 db9be9058558a8634a7bf4a7eddda360 113 SMART SM00530 7 63 2.5E-16 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 GYO_2721 db9be9058558a8634a7bf4a7eddda360 113 SUPERFAMILY SSF47413 2 69 1.69E-18 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 GYO_2721 db9be9058558a8634a7bf4a7eddda360 113 Pfam PF01381 Helix-turn-helix 8 60 3.3E-17 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 GYO_0611 5b36485cc5d790dfb733abdc02bbce3c 204 Pfam PF07987 Domain of unkown function (DUF1775) 27 144 1.0E-18 T 14-10-2018 IPR012533 YcnI-like GYO_0611 5b36485cc5d790dfb733abdc02bbce3c 204 Gene3D G3DSA:2.60.40.2230 24 169 5.1E-35 T 14-10-2018 IPR038507 YcnI-like superfamily GYO_3759 53e3e7207c99ef41b712f6ba649b98ee 213 Gene3D G3DSA:3.40.50.20 2 87 1.2E-13 T 14-10-2018 GYO_3759 53e3e7207c99ef41b712f6ba649b98ee 213 TIGRFAM TIGR03570 NeuD_NnaD: sugar O-acyltransferase, sialic acid O-acetyltransferase NeuD family 5 206 7.4E-68 T 14-10-2018 IPR020019 Sialic acid O-acyltransferase NeuD-like GYO_3759 53e3e7207c99ef41b712f6ba649b98ee 213 Gene3D G3DSA:2.160.10.10 92 200 1.6E-28 T 14-10-2018 GYO_3759 53e3e7207c99ef41b712f6ba649b98ee 213 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 103 135 4.0E-7 T 14-10-2018 IPR001451 Hexapeptide repeat GYO_3759 53e3e7207c99ef41b712f6ba649b98ee 213 SUPERFAMILY SSF51161 4 208 7.35E-45 T 14-10-2018 IPR011004 Trimeric LpxA-like superfamily GYO_3759 53e3e7207c99ef41b712f6ba649b98ee 213 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 166 194 - T 14-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 GYO_1775 8ad6186bf0b5d889ad20c3479f1c4542 303 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 243 256 - T 14-10-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 GYO_1775 8ad6186bf0b5d889ad20c3479f1c4542 303 Gene3D G3DSA:3.40.1190.20 1 303 1.8E-109 T 14-10-2018 IPR029056 Ribokinase-like GYO_1775 8ad6186bf0b5d889ad20c3479f1c4542 303 PIRSF PIRSF000535 1 303 6.5E-111 T 14-10-2018 IPR017583 Tagatose/fructose phosphokinase GO:0005975|GO:0016773 GYO_1775 8ad6186bf0b5d889ad20c3479f1c4542 303 Pfam PF00294 pfkB family carbohydrate kinase 10 284 1.8E-63 T 14-10-2018 IPR011611 Carbohydrate kinase PfkB GYO_1775 8ad6186bf0b5d889ad20c3479f1c4542 303 TIGRFAM TIGR03828 pfkB: 1-phosphofructokinase 2 301 2.0E-110 T 14-10-2018 IPR022463 Fructose 1-phosphate kinase GO:0008662 KEGG: 00051+2.7.1.56 GYO_1775 8ad6186bf0b5d889ad20c3479f1c4542 303 SUPERFAMILY SSF53613 1 301 1.71E-70 T 14-10-2018 IPR029056 Ribokinase-like GYO_1775 8ad6186bf0b5d889ad20c3479f1c4542 303 TIGRFAM TIGR03168 1-PFK: hexose kinase, 1-phosphofructokinase family 2 301 1.2E-111 T 14-10-2018 IPR017583 Tagatose/fructose phosphokinase GO:0005975|GO:0016773 GYO_0642 cbf4d60e51857a7d9e225327e4089e2c 96 TIGRFAM TIGR03954 integ_memb_HG: integral membrane protein 9 92 5.2E-28 T 14-10-2018 IPR023845 Domain of unknown function DUF3817, transmembrane GYO_0642 cbf4d60e51857a7d9e225327e4089e2c 96 Pfam PF12823 Domain of unknown function (DUF3817) 7 93 1.3E-21 T 14-10-2018 IPR023845 Domain of unknown function DUF3817, transmembrane GYO_1295 55b81b405e725174d494816e5310d06b 172 Gene3D G3DSA:1.10.1760.20 1 165 1.2E-7 T 14-10-2018 GYO_1295 55b81b405e725174d494816e5310d06b 172 ProDom PD968187 BETA-DEFENSIN ANTIBIOTIC PRECURSOR ANTIMICROBIAL DEFENSIN BETA SIGNAL DEFENSIN BD-32 DEFB-32 1 165 6.0E-60 T 14-10-2018 GYO_1295 55b81b405e725174d494816e5310d06b 172 Pfam PF17099 Tryptophan transporter TrpP 2 163 2.6E-74 T 14-10-2018 IPR031360 Tryptophan transporter TrpP GYO_4459 27139b7c0fee74cbb2db942da551aab4 430 ProSitePatterns PS00513 Adenylosuccinate synthetase active site. 131 142 - T 14-10-2018 IPR033128 Adenylosuccinate synthase, active site KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 GYO_4459 27139b7c0fee74cbb2db942da551aab4 430 Gene3D G3DSA:3.40.440.10 5 252 8.6E-105 T 14-10-2018 GYO_4459 27139b7c0fee74cbb2db942da551aab4 430 Gene3D G3DSA:1.10.300.10 100 199 8.6E-105 T 14-10-2018 GYO_4459 27139b7c0fee74cbb2db942da551aab4 430 Gene3D G3DSA:3.90.170.10 265 429 1.0E-70 T 14-10-2018 GYO_4459 27139b7c0fee74cbb2db942da551aab4 430 SUPERFAMILY SSF52540 1 427 2.12E-174 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase GYO_4459 27139b7c0fee74cbb2db942da551aab4 430 TIGRFAM TIGR00184 purA: adenylosuccinate synthase 5 427 1.2E-203 T 14-10-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 GYO_4459 27139b7c0fee74cbb2db942da551aab4 430 Hamap MF_00011 Adenylosuccinate synthetase [purA]. 1 430 212.07 T 14-10-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 GYO_4459 27139b7c0fee74cbb2db942da551aab4 430 ProSitePatterns PS01266 Adenylosuccinate synthetase GTP-binding site. 10 17 - T 14-10-2018 IPR018220 Adenylosuccinate synthase, GTP-binding site GO:0005525 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 GYO_4459 27139b7c0fee74cbb2db942da551aab4 430 SMART SM00788 3 422 2.9E-291 T 14-10-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 GYO_4459 27139b7c0fee74cbb2db942da551aab4 430 Pfam PF00709 Adenylosuccinate synthetase 4 420 2.0E-184 T 14-10-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 GYO_0589 5a3a7e4c837b7b6a332060742e48c881 226 Gene3D G3DSA:3.40.50.300 1 224 3.2E-56 T 14-10-2018 GYO_0589 5a3a7e4c837b7b6a332060742e48c881 226 SUPERFAMILY SSF52540 3 218 1.93E-52 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase GYO_0589 5a3a7e4c837b7b6a332060742e48c881 226 SMART SM00382 30 216 4.8E-8 T 14-10-2018 IPR003593 AAA+ ATPase domain GYO_0589 5a3a7e4c837b7b6a332060742e48c881 226 Pfam PF00005 ABC transporter 22 167 2.3E-28 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 GYO_0954 1e7ca7bcc506965b0af4af1caefb1530 207 Pfam PF04854 Protein of unknown function, DUF624 19 94 1.0E-27 T 14-10-2018 IPR006938 Protein of unknown function DUF624 GYO_3650 4c723557a0dcf686da4a219a9763bcca 227 TIGRFAM TIGR02141 modB_ABC: molybdate ABC transporter, permease protein 19 223 3.3E-69 T 14-10-2018 IPR011867 Molybdate ABC transporter, permease protein GO:0015098|GO:0015689|GO:0016021 GYO_3650 4c723557a0dcf686da4a219a9763bcca 227 SUPERFAMILY SSF161098 10 222 8.9E-48 T 14-10-2018 IPR035906 MetI-like superfamily GYO_3650 4c723557a0dcf686da4a219a9763bcca 227 Gene3D G3DSA:1.10.3720.10 2 226 1.6E-51 T 14-10-2018 IPR035906 MetI-like superfamily GYO_3650 4c723557a0dcf686da4a219a9763bcca 227 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 35 221 8.8E-22 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 GYO_2747 2e778beaf5a23ddafcae2e99286cd91a 375 Pfam PF00246 Zinc carboxypeptidase 101 353 3.4E-26 T 14-10-2018 IPR000834 Peptidase M14, carboxypeptidase A GO:0004181|GO:0006508|GO:0008270 GYO_2747 2e778beaf5a23ddafcae2e99286cd91a 375 PRINTS PR00765 Carboxypeptidase A metalloprotease (M14) family signature 107 119 3.1E-7 T 14-10-2018 IPR000834 Peptidase M14, carboxypeptidase A GO:0004181|GO:0006508|GO:0008270 GYO_2747 2e778beaf5a23ddafcae2e99286cd91a 375 PRINTS PR00765 Carboxypeptidase A metalloprotease (M14) family signature 128 142 3.1E-7 T 14-10-2018 IPR000834 Peptidase M14, carboxypeptidase A GO:0004181|GO:0006508|GO:0008270 GYO_2747 2e778beaf5a23ddafcae2e99286cd91a 375 PRINTS PR00765 Carboxypeptidase A metalloprotease (M14) family signature 225 233 3.1E-7 T 14-10-2018 IPR000834 Peptidase M14, carboxypeptidase A GO:0004181|GO:0006508|GO:0008270 GYO_2747 2e778beaf5a23ddafcae2e99286cd91a 375 Gene3D G3DSA:3.40.630.10 73 370 3.9E-42 T 14-10-2018 GYO_2747 2e778beaf5a23ddafcae2e99286cd91a 375 SMART SM00631 83 364 6.8E-44 T 14-10-2018 IPR000834 Peptidase M14, carboxypeptidase A GO:0004181|GO:0006508|GO:0008270 GYO_2747 2e778beaf5a23ddafcae2e99286cd91a 375 SUPERFAMILY SSF53187 80 369 5.29E-52 T 14-10-2018 GYO_1537 4e48be580c8ef6adae596a45ca56703c 392 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 4 318 2.2E-41 T 14-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 GYO_1537 4e48be580c8ef6adae596a45ca56703c 392 SUPERFAMILY SSF51905 1 330 2.47E-28 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily GYO_1537 4e48be580c8ef6adae596a45ca56703c 392 Gene3D G3DSA:3.50.50.100 1 391 2.6E-115 T 14-10-2018 GYO_1537 4e48be580c8ef6adae596a45ca56703c 392 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 5 24 1.3E-10 T 14-10-2018 GYO_1537 4e48be580c8ef6adae596a45ca56703c 392 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 156 174 1.3E-10 T 14-10-2018 GYO_1537 4e48be580c8ef6adae596a45ca56703c 392 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 100 118 1.3E-10 T 14-10-2018 GYO_1537 4e48be580c8ef6adae596a45ca56703c 392 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 275 297 1.3E-10 T 14-10-2018 GYO_1537 4e48be580c8ef6adae596a45ca56703c 392 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 4 26 3.0E-5 T 14-10-2018 GYO_1537 4e48be580c8ef6adae596a45ca56703c 392 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 156 181 3.0E-5 T 14-10-2018 GYO_1537 4e48be580c8ef6adae596a45ca56703c 392 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 290 297 3.0E-5 T 14-10-2018 GYO_0855 56abf5dde6d426f480b57bfc4104a923 229 Pfam PF00814 Glycoprotease family 32 224 4.6E-34 T 14-10-2018 IPR000905 Gcp-like domain GYO_0855 56abf5dde6d426f480b57bfc4104a923 229 Gene3D G3DSA:3.30.420.40 3 216 1.3E-48 T 14-10-2018 GYO_0855 56abf5dde6d426f480b57bfc4104a923 229 Gene3D G3DSA:3.30.420.40 95 189 1.3E-48 T 14-10-2018 GYO_0855 56abf5dde6d426f480b57bfc4104a923 229 SUPERFAMILY SSF53067 1 102 2.2E-27 T 14-10-2018 GYO_0855 56abf5dde6d426f480b57bfc4104a923 229 SUPERFAMILY SSF53067 108 214 4.53E-13 T 14-10-2018 GYO_0855 56abf5dde6d426f480b57bfc4104a923 229 TIGRFAM TIGR03725 T6A_YeaZ: tRNA threonylcarbamoyl adenosine modification protein YeaZ 3 216 3.9E-53 T 14-10-2018 IPR022496 tRNA threonylcarbamoyl adenosine modification protein TsaB GO:0002949 GYO_4079 88442427be528ee732289a36a331c8a4 184 Hamap MF_01170 Chromosome-anchoring protein RacA [racA]. 1 182 21.043 T 14-10-2018 IPR023522 Chromosome-anchoring protein RacA GYO_4079 88442427be528ee732289a36a331c8a4 184 Gene3D G3DSA:1.10.1660.10 1 66 5.8E-24 T 14-10-2018 GYO_4079 88442427be528ee732289a36a331c8a4 184 Pfam PF13411 MerR HTH family regulatory protein 2 62 1.4E-11 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 GYO_4079 88442427be528ee732289a36a331c8a4 184 SUPERFAMILY SSF46955 1 119 8.7E-11 T 14-10-2018 IPR009061 Putative DNA-binding domain superfamily GYO_2597 137646e6cc65f1d610853061755cdc68 185 PRINTS PR00502 NUDIX hydrolase family signature 86 101 2.2E-5 T 14-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 GYO_2597 137646e6cc65f1d610853061755cdc68 185 PRINTS PR00502 NUDIX hydrolase family signature 72 86 2.2E-5 T 14-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 GYO_2597 137646e6cc65f1d610853061755cdc68 185 ProSitePatterns PS00893 Nudix box signature. 77 98 - T 14-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 GYO_2597 137646e6cc65f1d610853061755cdc68 185 SUPERFAMILY SSF55811 7 177 4.74E-51 T 14-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 GYO_2597 137646e6cc65f1d610853061755cdc68 185 Pfam PF00293 NUDIX domain 42 156 3.0E-20 T 14-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 GYO_2597 137646e6cc65f1d610853061755cdc68 185 Gene3D G3DSA:3.90.79.10 4 185 5.2E-57 T 14-10-2018 GYO_4037 d3b0a6414d5f083d7c424d4014df0eb5 62 Pfam PF05532 CsbD-like 8 58 2.0E-16 T 14-10-2018 IPR008462 CsbD-like domain GYO_4037 d3b0a6414d5f083d7c424d4014df0eb5 62 SUPERFAMILY SSF69047 7 59 5.62E-11 T 14-10-2018 IPR036629 YjbJ superfamily GYO_4037 d3b0a6414d5f083d7c424d4014df0eb5 62 Gene3D G3DSA:1.10.1470.10 6 61 1.9E-9 T 14-10-2018 IPR036629 YjbJ superfamily GYO_3602 bac580b8e92227edeb38e4406085ecd2 153 Gene3D G3DSA:1.20.1260.10 1 153 3.7E-58 T 14-10-2018 IPR012347 Ferritin-like GYO_3602 bac580b8e92227edeb38e4406085ecd2 153 ProSitePatterns PS00818 Dps protein family signature 1. 35 51 - T 14-10-2018 IPR023188 DNA-binding protein Dps, conserved site GO:0016722|GO:0055114 GYO_3602 bac580b8e92227edeb38e4406085ecd2 153 Pfam PF00210 Ferritin-like domain 16 153 4.7E-33 T 14-10-2018 IPR008331 Ferritin/DPS protein domain GO:0006879|GO:0008199 GYO_3602 bac580b8e92227edeb38e4406085ecd2 153 PIRSF PIRSF005900 1 153 1.3E-48 T 14-10-2018 IPR002177 DNA-binding protein Dps GYO_3602 bac580b8e92227edeb38e4406085ecd2 153 ProSitePatterns PS00819 Dps protein family signature 2. 61 75 - T 14-10-2018 IPR023188 DNA-binding protein Dps, conserved site GO:0016722|GO:0055114 GYO_3602 bac580b8e92227edeb38e4406085ecd2 153 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 59 75 5.6E-17 T 14-10-2018 IPR002177 DNA-binding protein Dps GYO_3602 bac580b8e92227edeb38e4406085ecd2 153 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 130 148 5.6E-17 T 14-10-2018 IPR002177 DNA-binding protein Dps GYO_3602 bac580b8e92227edeb38e4406085ecd2 153 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 35 51 5.6E-17 T 14-10-2018 IPR002177 DNA-binding protein Dps GYO_3602 bac580b8e92227edeb38e4406085ecd2 153 SUPERFAMILY SSF47240 15 153 5.5E-44 T 14-10-2018 IPR009078 Ferritin-like superfamily GYO_4490 e8f53ee97dfc8c492c693e1950651020 150 Pfam PF01047 MarR family 28 85 6.0E-17 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 GYO_4490 e8f53ee97dfc8c492c693e1950651020 150 Gene3D G3DSA:1.10.10.10 2 145 2.7E-36 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily GYO_4490 e8f53ee97dfc8c492c693e1950651020 150 ProSitePatterns PS01117 MarR-type HTH domain signature. 60 94 - T 14-10-2018 IPR023187 Transcriptional regulator MarR-type, conserved site GYO_4490 e8f53ee97dfc8c492c693e1950651020 150 PRINTS PR00598 Bacterial regulatory protein MarR family signature 81 97 5.5E-14 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 GYO_4490 e8f53ee97dfc8c492c693e1950651020 150 PRINTS PR00598 Bacterial regulatory protein MarR family signature 62 77 5.5E-14 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 GYO_4490 e8f53ee97dfc8c492c693e1950651020 150 PRINTS PR00598 Bacterial regulatory protein MarR family signature 111 131 5.5E-14 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 GYO_4490 e8f53ee97dfc8c492c693e1950651020 150 PRINTS PR00598 Bacterial regulatory protein MarR family signature 45 61 5.5E-14 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 GYO_4490 e8f53ee97dfc8c492c693e1950651020 150 SUPERFAMILY SSF46785 3 142 1.31E-33 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily GYO_4490 e8f53ee97dfc8c492c693e1950651020 150 SMART SM00347 21 121 6.9E-32 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 GYO_0003 c1ebfbd2efa98c54947905a965e329ea 71 SUPERFAMILY SSF55174 4 67 2.62E-19 T 14-10-2018 GYO_0003 c1ebfbd2efa98c54947905a965e329ea 71 TIGRFAM TIGR02988 YaaA_near_RecF: S4 domain protein YaaA 5 63 1.5E-31 T 14-10-2018 IPR014330 RNA-binding S4-related,YaaA GYO_0003 c1ebfbd2efa98c54947905a965e329ea 71 Pfam PF13275 S4 domain 5 69 2.5E-29 T 14-10-2018 GYO_0003 c1ebfbd2efa98c54947905a965e329ea 71 Gene3D G3DSA:3.10.290.10 1 70 4.9E-25 T 14-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 GYO_2760 610e59ac24e2a587357c7b4b283603fa 242 SMART SM00382 20 213 2.9E-13 T 14-10-2018 IPR003593 AAA+ ATPase domain GYO_2760 610e59ac24e2a587357c7b4b283603fa 242 Gene3D G3DSA:3.40.50.300 2 240 4.4E-65 T 14-10-2018 GYO_2760 610e59ac24e2a587357c7b4b283603fa 242 Pfam PF00005 ABC transporter 11 167 1.6E-33 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 GYO_2760 610e59ac24e2a587357c7b4b283603fa 242 SUPERFAMILY SSF52540 3 229 6.72E-59 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase GYO_2760 610e59ac24e2a587357c7b4b283603fa 242 TIGRFAM TIGR00972 3a0107s01c2: phosphate ABC transporter, ATP-binding protein 2 242 8.1E-123 T 14-10-2018 IPR005670 Phosphate transport system permease protein 1 GO:0005315|GO:0016020|GO:0035435 GYO_2760 610e59ac24e2a587357c7b4b283603fa 242 ProSitePatterns PS00211 ABC transporters family signature. 139 153 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 GYO_2934 78dfc043f33d2d7013db427c6d2c6b10 244 Gene3D G3DSA:1.20.1290.10 1 109 9.0E-33 T 14-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 GYO_2934 78dfc043f33d2d7013db427c6d2c6b10 244 SUPERFAMILY SSF51182 133 242 5.56E-27 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily GYO_2934 78dfc043f33d2d7013db427c6d2c6b10 244 Gene3D G3DSA:2.60.120.10 110 244 6.9E-44 T 14-10-2018 IPR014710 RmlC-like jelly roll fold GYO_2934 78dfc043f33d2d7013db427c6d2c6b10 244 Pfam PF02627 Carboxymuconolactone decarboxylase family 17 102 1.9E-23 T 14-10-2018 IPR003779 Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 GYO_2934 78dfc043f33d2d7013db427c6d2c6b10 244 Pfam PF07883 Cupin domain 158 218 5.8E-8 T 14-10-2018 IPR013096 Cupin 2, conserved barrel GYO_2934 78dfc043f33d2d7013db427c6d2c6b10 244 SUPERFAMILY SSF69118 10 108 6.94E-28 T 14-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 GYO_1318 b9ce597bd0ae89a22a0a74e6a8cf79b8 346 SUPERFAMILY SSF101821 73 185 8.09E-31 T 14-10-2018 GYO_1318 b9ce597bd0ae89a22a0a74e6a8cf79b8 346 Gene3D G3DSA:3.40.630.10 13 341 6.0E-124 T 14-10-2018 GYO_1318 b9ce597bd0ae89a22a0a74e6a8cf79b8 346 Pfam PF05343 M42 glutamyl aminopeptidase 48 336 1.3E-89 T 14-10-2018 IPR008007 Peptidase M42 GYO_1318 b9ce597bd0ae89a22a0a74e6a8cf79b8 346 Gene3D G3DSA:2.40.30.40 76 170 6.0E-124 T 14-10-2018 IPR023367 Peptidase M42, domain 2 GYO_1318 b9ce597bd0ae89a22a0a74e6a8cf79b8 346 PIRSF PIRSF001123 4 343 9.6E-39 T 14-10-2018 IPR008007 Peptidase M42 GYO_1318 b9ce597bd0ae89a22a0a74e6a8cf79b8 346 SUPERFAMILY SSF53187 6 342 1.43E-55 T 14-10-2018 GYO_0137 c68f50cb73caf67cc97b3ec3da7d1166 138 TIGRFAM TIGR00981 rpsL_bact: ribosomal protein uS12 1 137 2.0E-69 T 14-10-2018 IPR005679 Ribosomal protein S12, bacterial-type GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 GYO_0137 c68f50cb73caf67cc97b3ec3da7d1166 138 Pfam PF00164 Ribosomal protein S12/S23 36 136 4.2E-38 T 14-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 GYO_0137 c68f50cb73caf67cc97b3ec3da7d1166 138 PIRSF PIRSF002133 1 137 1.7E-49 T 14-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 GYO_0137 c68f50cb73caf67cc97b3ec3da7d1166 138 PRINTS PR01034 Ribosomal protein S12 signature 40 55 1.1E-59 T 14-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 GYO_0137 c68f50cb73caf67cc97b3ec3da7d1166 138 PRINTS PR01034 Ribosomal protein S12 signature 123 135 1.1E-59 T 14-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 GYO_0137 c68f50cb73caf67cc97b3ec3da7d1166 138 PRINTS PR01034 Ribosomal protein S12 signature 71 90 1.1E-59 T 14-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 GYO_0137 c68f50cb73caf67cc97b3ec3da7d1166 138 PRINTS PR01034 Ribosomal protein S12 signature 90 107 1.1E-59 T 14-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 GYO_0137 c68f50cb73caf67cc97b3ec3da7d1166 138 PRINTS PR01034 Ribosomal protein S12 signature 107 123 1.1E-59 T 14-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 GYO_0137 c68f50cb73caf67cc97b3ec3da7d1166 138 PRINTS PR01034 Ribosomal protein S12 signature 55 70 1.1E-59 T 14-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 GYO_0137 c68f50cb73caf67cc97b3ec3da7d1166 138 Gene3D G3DSA:2.40.50.140 1 138 5.6E-63 T 14-10-2018 GYO_0137 c68f50cb73caf67cc97b3ec3da7d1166 138 SUPERFAMILY SSF50249 2 136 2.4E-49 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold GYO_0137 c68f50cb73caf67cc97b3ec3da7d1166 138 ProSitePatterns PS00055 Ribosomal protein S12 signature. 56 63 - T 14-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 GYO_0137 c68f50cb73caf67cc97b3ec3da7d1166 138 Hamap MF_00403_B 30S ribosomal protein S12 [rpsL]. 1 136 40.627 T 14-10-2018 IPR005679 Ribosomal protein S12, bacterial-type GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 GYO_2368 7ce0414e0684031edc6bc1986b5ac143 233 SUPERFAMILY SSF53167 2 231 4.32E-91 T 14-10-2018 IPR035994 Nucleoside phosphorylase superfamily GO:0003824|GO:0009116 GYO_2368 7ce0414e0684031edc6bc1986b5ac143 233 Pfam PF01048 Phosphorylase superfamily 15 217 1.3E-40 T 14-10-2018 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 GYO_2368 7ce0414e0684031edc6bc1986b5ac143 233 Gene3D G3DSA:3.40.50.1580 1 233 4.0E-75 T 14-10-2018 GYO_2368 7ce0414e0684031edc6bc1986b5ac143 233 TIGRFAM TIGR00107 deoD: purine nucleoside phosphorylase 4 233 3.3E-118 T 14-10-2018 IPR004402 Purine nucleoside phosphorylase DeoD-type GO:0004731|GO:0006139 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5532|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1 GYO_2368 7ce0414e0684031edc6bc1986b5ac143 233 Hamap MF_01627 Purine nucleoside phosphorylase DeoD-type [deoD]. 1 233 47.397 T 14-10-2018 IPR004402 Purine nucleoside phosphorylase DeoD-type GO:0004731|GO:0006139 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5532|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1 GYO_2368 7ce0414e0684031edc6bc1986b5ac143 233 ProSitePatterns PS01232 Purine and other phosphorylases family 1 signature. 61 76 - T 14-10-2018 IPR018016 Nucleoside phosphorylase, conserved site GO:0016763 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5532|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1|Reactome: R-HSA-73614|Reactome: R-HSA-73621 GYO_3108 0219337614579f833896bcb4b448535e 85 Hamap MF_02013 Cell division protein ZapA [zapA]. 1 85 27.01 T 14-10-2018 IPR023688 Cell division protein ZapA, firmicutes GO:0051301 GYO_3108 0219337614579f833896bcb4b448535e 85 SUPERFAMILY SSF102829 10 84 1.15E-20 T 14-10-2018 IPR036192 Cell division protein ZapA-like superfamily GYO_3108 0219337614579f833896bcb4b448535e 85 Pfam PF05164 Cell division protein ZapA 10 82 5.5E-16 T 14-10-2018 IPR007838 Cell division protein ZapA-like GYO_1507 95d1c24f7ae1315e98fe74cd6bf3c9f0 167 Pfam PF13302 Acetyltransferase (GNAT) domain 42 151 1.8E-15 T 14-10-2018 IPR000182 GNAT domain GYO_1507 95d1c24f7ae1315e98fe74cd6bf3c9f0 167 Gene3D G3DSA:3.40.630.30 1 162 2.2E-23 T 14-10-2018 GYO_1507 95d1c24f7ae1315e98fe74cd6bf3c9f0 167 SUPERFAMILY SSF55729 2 161 8.35E-23 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase GYO_2309 224f590b31a6a26c4d8639d3086158e2 312 Gene3D G3DSA:1.10.10.10 1 58 4.4E-12 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily GYO_2309 224f590b31a6a26c4d8639d3086158e2 312 Pfam PF08279 HTH domain 5 56 1.2E-13 T 14-10-2018 IPR013196 Helix-turn-helix, type 11 GYO_2309 224f590b31a6a26c4d8639d3086158e2 312 SUPERFAMILY SSF46785 2 56 3.96E-8 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily GYO_2309 224f590b31a6a26c4d8639d3086158e2 312 Pfam PF13280 WYL domain 140 306 7.2E-37 T 14-10-2018 IPR026881 WYL domain GYO_2309 224f590b31a6a26c4d8639d3086158e2 312 PIRSF PIRSF016838 1 312 2.3E-28 T 14-10-2018 IPR028349 Protein PafC GYO_4185 b3545d3c41ae6e664f72bc361b9ed68d 199 Pfam PF00171 Aldehyde dehydrogenase family 15 171 2.7E-27 T 14-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 GYO_4185 b3545d3c41ae6e664f72bc361b9ed68d 199 Gene3D G3DSA:3.40.605.10 152 171 8.4E-63 T 14-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 GYO_4185 b3545d3c41ae6e664f72bc361b9ed68d 199 Gene3D G3DSA:3.40.309.10 2 151 8.4E-63 T 14-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 GYO_4185 b3545d3c41ae6e664f72bc361b9ed68d 199 SUPERFAMILY SSF53720 3 185 4.71E-46 T 14-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 GYO_4403 d274bb0f28491ec5d5f513b0fe49a9ba 230 Pfam PF04172 LrgB-like family 14 225 3.5E-72 T 14-10-2018 IPR007300 CidB/LrgB family GYO_1087 c9adab9efa5de3b4fc35d6e10bf96bcf 254 SUPERFAMILY SSF46689 1 73 5.91E-20 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 GYO_1087 c9adab9efa5de3b4fc35d6e10bf96bcf 254 Gene3D G3DSA:1.10.10.10 2 75 2.6E-17 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily GYO_1087 c9adab9efa5de3b4fc35d6e10bf96bcf 254 Gene3D G3DSA:3.40.50.10490 81 254 2.9E-25 T 14-10-2018 GYO_1087 c9adab9efa5de3b4fc35d6e10bf96bcf 254 SUPERFAMILY SSF53697 84 247 2.4E-21 T 14-10-2018 GYO_1087 c9adab9efa5de3b4fc35d6e10bf96bcf 254 Pfam PF01380 SIS domain 110 218 3.6E-14 T 14-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 GYO_1087 c9adab9efa5de3b4fc35d6e10bf96bcf 254 Pfam PF01418 Helix-turn-helix domain, rpiR family 1 76 2.4E-30 T 14-10-2018 IPR000281 Helix-turn-helix protein RpiR GO:0003700|GO:0006355 GYO_3408 4ebcd9180a025db3d537e95b3e6c6257 663 Gene3D G3DSA:1.10.8.500 303 353 1.8E-13 T 14-10-2018 GYO_3408 4ebcd9180a025db3d537e95b3e6c6257 663 Gene3D G3DSA:3.30.450.20 86 183 9.4E-30 T 14-10-2018 GYO_3408 4ebcd9180a025db3d537e95b3e6c6257 663 Pfam PF00672 HAMP domain 303 351 3.8E-16 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 GYO_3408 4ebcd9180a025db3d537e95b3e6c6257 663 Gene3D G3DSA:3.30.450.20 184 267 9.4E-30 T 14-10-2018 GYO_3408 4ebcd9180a025db3d537e95b3e6c6257 663 Pfam PF02743 Cache domain 47 263 9.6E-28 T 14-10-2018 IPR033479 Double Cache domain 1 GYO_3408 4ebcd9180a025db3d537e95b3e6c6257 663 Gene3D G3DSA:1.10.287.950 354 659 1.8E-73 T 14-10-2018 GYO_3408 4ebcd9180a025db3d537e95b3e6c6257 663 SUPERFAMILY SSF58104 323 659 5.49E-74 T 14-10-2018 GYO_3408 4ebcd9180a025db3d537e95b3e6c6257 663 SMART SM00304 303 355 2.6E-17 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 GYO_3408 4ebcd9180a025db3d537e95b3e6c6257 663 SMART SM00304 586 656 91.0 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 GYO_3408 4ebcd9180a025db3d537e95b3e6c6257 663 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 429 612 6.1E-56 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 GYO_3408 4ebcd9180a025db3d537e95b3e6c6257 663 SMART SM00319 33 151 2.5E-11 T 14-10-2018 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding GO:0006935|GO:0007165 GYO_3408 4ebcd9180a025db3d537e95b3e6c6257 663 SMART SM00283 384 659 1.3E-106 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 GYO_3408 4ebcd9180a025db3d537e95b3e6c6257 663 SUPERFAMILY SSF103190 106 190 1.88E-10 T 14-10-2018 IPR029151 Periplasmic sensor-like domain superfamily GYO_4473 a09dc1314ab8c7749e0ee6c72e84545d 125 Pfam PF01638 HxlR-like helix-turn-helix 22 109 4.1E-40 T 14-10-2018 IPR002577 Helix-turn-helix, HxlR type GYO_4473 a09dc1314ab8c7749e0ee6c72e84545d 125 SUPERFAMILY SSF46785 10 113 6.39E-34 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily GYO_4473 a09dc1314ab8c7749e0ee6c72e84545d 125 Gene3D G3DSA:1.10.10.10 1 114 1.9E-43 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily GYO_0243 e8f84ca8b37f8983e321747d91739275 141 ProDom PD033094 XKDS PHAGE-LIKE PBSX ELEMENT PHAGE LIN1286 RELATED YQBS 11 135 2.0E-62 T 14-10-2018 IPR020288 Protein of unknown function DUF2634 GYO_0243 e8f84ca8b37f8983e321747d91739275 141 SUPERFAMILY SSF160719 37 125 6.28E-5 T 14-10-2018 GYO_0243 e8f84ca8b37f8983e321747d91739275 141 Pfam PF10934 Protein of unknown function (DUF2634) 25 124 2.1E-28 T 14-10-2018 IPR020288 Protein of unknown function DUF2634 GYO_0322 e8f84ca8b37f8983e321747d91739275 141 ProDom PD033094 XKDS PHAGE-LIKE PBSX ELEMENT PHAGE LIN1286 RELATED YQBS 11 135 2.0E-62 T 14-10-2018 IPR020288 Protein of unknown function DUF2634 GYO_0322 e8f84ca8b37f8983e321747d91739275 141 SUPERFAMILY SSF160719 37 125 6.28E-5 T 14-10-2018 GYO_0322 e8f84ca8b37f8983e321747d91739275 141 Pfam PF10934 Protein of unknown function (DUF2634) 25 124 2.1E-28 T 14-10-2018 IPR020288 Protein of unknown function DUF2634 GYO_3310 e5160cc6a755929257448c023a542ebd 257 SUPERFAMILY SSF53474 11 256 4.8E-45 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold GYO_3310 e5160cc6a755929257448c023a542ebd 257 Pfam PF00326 Prolyl oligopeptidase family 65 256 2.8E-23 T 14-10-2018 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 GYO_3310 e5160cc6a755929257448c023a542ebd 257 Gene3D G3DSA:3.40.50.1820 19 257 5.9E-42 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold GYO_3310 e5160cc6a755929257448c023a542ebd 257 ProSitePatterns PS00708 Prolyl endopeptidase family serine active site. 97 127 - T 14-10-2018 IPR002471 Peptidase S9, serine active site GO:0004252|GO:0006508 GYO_3238 972c1f8c9798641804b350ec60fb7f2c 213 Hamap MF_01057 tRNA (guanine-N(7)-)-methyltransferase [trmB]. 1 212 29.47 T 14-10-2018 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type GO:0006400|GO:0008176 Reactome: R-HSA-6782315 GYO_3238 972c1f8c9798641804b350ec60fb7f2c 213 SUPERFAMILY SSF53335 26 209 3.96E-29 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase GYO_3238 972c1f8c9798641804b350ec60fb7f2c 213 Pfam PF02390 Putative methyltransferase 38 207 1.7E-53 T 14-10-2018 GYO_3238 972c1f8c9798641804b350ec60fb7f2c 213 TIGRFAM TIGR00091 TIGR00091: tRNA (guanine-N(7)-)-methyltransferase 25 212 1.9E-72 T 14-10-2018 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type GO:0006400|GO:0008176 Reactome: R-HSA-6782315 GYO_3238 972c1f8c9798641804b350ec60fb7f2c 213 Gene3D G3DSA:3.40.50.150 1 213 5.2E-74 T 14-10-2018 GYO_2816 4dd7e03ee6eb21f44d5189b812a2ba65 187 Hamap MF_01151 Protein GrpE [grpE]. 3 187 21.475 T 14-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 GYO_2816 4dd7e03ee6eb21f44d5189b812a2ba65 187 Gene3D G3DSA:2.30.22.10 131 187 2.1E-25 T 14-10-2018 IPR009012 GrpE nucleotide exchange factor, head GO:0006457 Reactome: R-HSA-1268020 GYO_2816 4dd7e03ee6eb21f44d5189b812a2ba65 187 Pfam PF01025 GrpE 24 187 6.3E-52 T 14-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 GYO_2816 4dd7e03ee6eb21f44d5189b812a2ba65 187 Gene3D G3DSA:3.90.20.20 1 130 1.8E-22 T 14-10-2018 IPR013805 GrpE nucleotide exchange factor, coiled-coil Reactome: R-HSA-1268020 GYO_2816 4dd7e03ee6eb21f44d5189b812a2ba65 187 PRINTS PR00773 GrpE protein signature 85 100 9.3E-31 T 14-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 GYO_2816 4dd7e03ee6eb21f44d5189b812a2ba65 187 PRINTS PR00773 GrpE protein signature 139 154 9.3E-31 T 14-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 GYO_2816 4dd7e03ee6eb21f44d5189b812a2ba65 187 PRINTS PR00773 GrpE protein signature 166 185 9.3E-31 T 14-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 GYO_2816 4dd7e03ee6eb21f44d5189b812a2ba65 187 PRINTS PR00773 GrpE protein signature 57 73 9.3E-31 T 14-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 GYO_2816 4dd7e03ee6eb21f44d5189b812a2ba65 187 SUPERFAMILY SSF58014 37 131 1.16E-24 T 14-10-2018 IPR013805 GrpE nucleotide exchange factor, coiled-coil Reactome: R-HSA-1268020 GYO_2816 4dd7e03ee6eb21f44d5189b812a2ba65 187 ProSitePatterns PS01071 grpE protein signature. 142 185 - T 14-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 GYO_2816 4dd7e03ee6eb21f44d5189b812a2ba65 187 SUPERFAMILY SSF51064 132 187 2.75E-19 T 14-10-2018 IPR009012 GrpE nucleotide exchange factor, head GO:0006457 Reactome: R-HSA-1268020 GYO_3592 225be6c5d73b0a4ad952329399babdef 538 Gene3D G3DSA:1.20.1720.10 13 195 5.6E-49 T 14-10-2018 GYO_3592 225be6c5d73b0a4ad952329399babdef 538 Gene3D G3DSA:1.20.1250.20 254 425 2.6E-23 T 14-10-2018 GYO_3592 225be6c5d73b0a4ad952329399babdef 538 PRINTS PR01036 Tetracycline resistance protein TetB signature 16 40 4.2E-13 T 14-10-2018 GYO_3592 225be6c5d73b0a4ad952329399babdef 538 PRINTS PR01036 Tetracycline resistance protein TetB signature 106 126 4.2E-13 T 14-10-2018 GYO_3592 225be6c5d73b0a4ad952329399babdef 538 PRINTS PR01036 Tetracycline resistance protein TetB signature 301 325 4.2E-13 T 14-10-2018 GYO_3592 225be6c5d73b0a4ad952329399babdef 538 PRINTS PR01036 Tetracycline resistance protein TetB signature 136 160 4.2E-13 T 14-10-2018 GYO_3592 225be6c5d73b0a4ad952329399babdef 538 PRINTS PR01036 Tetracycline resistance protein TetB signature 399 418 4.2E-13 T 14-10-2018 GYO_3592 225be6c5d73b0a4ad952329399babdef 538 Pfam PF07690 Major Facilitator Superfamily 17 408 3.2E-53 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 GYO_3592 225be6c5d73b0a4ad952329399babdef 538 SUPERFAMILY SSF103473 7 514 7.06E-74 T 14-10-2018 IPR036259 MFS transporter superfamily GYO_3592 225be6c5d73b0a4ad952329399babdef 538 TIGRFAM TIGR00711 efflux_EmrB: drug resistance MFS transporter, drug:H+ antiporter-2 (14 Spanner) (DHA2) family 13 448 1.9E-87 T 14-10-2018 IPR004638 Drug resistance transporter EmrB/QacA subfamily GO:0016021|GO:0022857|GO:0055085 GYO_3592 225be6c5d73b0a4ad952329399babdef 538 ProSitePatterns PS00216 Sugar transport proteins signature 1. 66 82 - T 14-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 GYO_2093 c0e95e1645cfa6fc2973af4c756d653f 90 Gene3D G3DSA:2.60.40.3150 47 90 1.3E-30 T 14-10-2018 GYO_2093 c0e95e1645cfa6fc2973af4c756d653f 90 Pfam PF14157 YmzC-like protein 29 88 4.9E-31 T 14-10-2018 IPR025448 YmzC-like protein GYO_1402 661125b082f8940df8c7cb3150538ce3 248 Pfam PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 51 231 9.7E-34 T 14-10-2018 IPR003740 Uncharacterised membrane protein YitT GYO_0730 d2e00e3022cb5dada823bcffe83edc38 342 Pfam PF00487 Fatty acid desaturase 53 292 3.3E-36 T 14-10-2018 IPR005804 Fatty acid desaturase domain GO:0006629 GYO_1442 3d50c5ff39d3a3e2baf038d065423b39 542 SUPERFAMILY SSF53850 41 540 5.43E-152 T 14-10-2018 GYO_1442 3d50c5ff39d3a3e2baf038d065423b39 542 ProSitePatterns PS01040 Bacterial extracellular solute-binding proteins, family 5 signature. 93 115 - T 14-10-2018 IPR023765 Solute-binding protein family 5, conserved site GYO_1442 3d50c5ff39d3a3e2baf038d065423b39 542 PIRSF PIRSF002741 4 542 1.9E-171 T 14-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 GYO_1442 3d50c5ff39d3a3e2baf038d065423b39 542 Gene3D G3DSA:3.10.105.10 288 510 1.2E-198 T 14-10-2018 GYO_1442 3d50c5ff39d3a3e2baf038d065423b39 542 Gene3D G3DSA:3.90.76.10 76 195 1.2E-198 T 14-10-2018 GYO_1442 3d50c5ff39d3a3e2baf038d065423b39 542 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 88 457 3.1E-103 T 14-10-2018 IPR000914 Solute-binding protein family 5 domain GYO_1442 3d50c5ff39d3a3e2baf038d065423b39 542 Gene3D G3DSA:3.40.190.10 54 524 1.2E-198 T 14-10-2018 GYO_3742 80cab5469cfbbae44856ff2beac7216c 269 Gene3D G3DSA:3.40.50.1820 2 267 7.7E-80 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold GYO_3742 80cab5469cfbbae44856ff2beac7216c 269 Pfam PF12697 Alpha/beta hydrolase family 21 259 4.1E-19 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 GYO_3742 80cab5469cfbbae44856ff2beac7216c 269 PRINTS PR00111 Alpha/beta hydrolase fold signature 92 105 5.7E-6 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 GYO_3742 80cab5469cfbbae44856ff2beac7216c 269 PRINTS PR00111 Alpha/beta hydrolase fold signature 211 225 5.7E-6 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 GYO_3742 80cab5469cfbbae44856ff2beac7216c 269 PRINTS PR00111 Alpha/beta hydrolase fold signature 106 119 5.7E-6 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 GYO_3742 80cab5469cfbbae44856ff2beac7216c 269 PRINTS PR00111 Alpha/beta hydrolase fold signature 44 59 5.7E-6 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 GYO_3742 80cab5469cfbbae44856ff2beac7216c 269 SUPERFAMILY SSF53474 12 266 3.4E-51 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold GYO_0836 64be68a5d7484317dc2aaa53574a8e75 325 SMART SM00471 45 160 1.6E-8 T 14-10-2018 IPR003607 HD/PDEase domain GYO_0836 64be68a5d7484317dc2aaa53574a8e75 325 Pfam PF01966 HD domain 49 117 6.9E-8 T 14-10-2018 IPR006674 HD domain GYO_0836 64be68a5d7484317dc2aaa53574a8e75 325 Gene3D G3DSA:1.10.3210.10 1 259 5.1E-41 T 14-10-2018 GYO_0836 64be68a5d7484317dc2aaa53574a8e75 325 SUPERFAMILY SSF109604 3 275 2.51E-47 T 14-10-2018 GYO_0873 03f5cf8a552ef669834a8ad116bbc572 320 Gene3D G3DSA:3.40.1190.20 2 320 9.2E-90 T 14-10-2018 IPR029056 Ribokinase-like GYO_0873 03f5cf8a552ef669834a8ad116bbc572 320 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 254 267 - T 14-10-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 GYO_0873 03f5cf8a552ef669834a8ad116bbc572 320 SUPERFAMILY SSF53613 1 317 2.81E-82 T 14-10-2018 IPR029056 Ribokinase-like GYO_0873 03f5cf8a552ef669834a8ad116bbc572 320 Pfam PF00294 pfkB family carbohydrate kinase 4 312 4.6E-84 T 14-10-2018 IPR011611 Carbohydrate kinase PfkB GYO_0873 03f5cf8a552ef669834a8ad116bbc572 320 ProSitePatterns PS00583 pfkB family of carbohydrate kinases signature 1. 36 60 - T 14-10-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 GYO_1348 8c454fb264a38d051efe9a6a63af6807 489 Pfam PF00474 Sodium:solute symporter family 35 428 5.1E-24 T 14-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 GYO_1348 8c454fb264a38d051efe9a6a63af6807 489 Gene3D G3DSA:1.20.1730.10 21 488 1.8E-33 T 14-10-2018 IPR038377 Sodium/glucose symporter superfamily GYO_2398 92b4b5d8b19ea81e0c9fdd48d678564f 193 Pfam PF02630 SCO1/SenC 1 173 7.7E-66 T 14-10-2018 IPR003782 Copper chaperone SCO1/SenC Reactome: R-HSA-5628897|Reactome: R-HSA-611105 GYO_2398 92b4b5d8b19ea81e0c9fdd48d678564f 193 SUPERFAMILY SSF52833 28 189 9.12E-45 T 14-10-2018 IPR036249 Thioredoxin-like superfamily GYO_2398 92b4b5d8b19ea81e0c9fdd48d678564f 193 Gene3D G3DSA:3.40.30.10 20 193 7.9E-62 T 14-10-2018 GYO_3269 6f3a5aa337c2df8e02b99d62cd3932f0 226 SUPERFAMILY SSF52540 1 210 6.64E-52 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase GYO_3269 6f3a5aa337c2df8e02b99d62cd3932f0 226 TIGRFAM TIGR00347 bioD: dethiobiotin synthase 1 167 1.8E-62 T 14-10-2018 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380 GYO_3269 6f3a5aa337c2df8e02b99d62cd3932f0 226 Gene3D G3DSA:3.40.50.300 1 218 8.6E-60 T 14-10-2018 GYO_3269 6f3a5aa337c2df8e02b99d62cd3932f0 226 PIRSF PIRSF006755 1 225 9.4E-76 T 14-10-2018 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380 GYO_3269 6f3a5aa337c2df8e02b99d62cd3932f0 226 Pfam PF13500 AAA domain 1 205 2.5E-45 T 14-10-2018 GYO_3269 6f3a5aa337c2df8e02b99d62cd3932f0 226 Hamap MF_00336 ATP-dependent dethiobiotin synthetase BioD [bioD]. 1 203 26.248 T 14-10-2018 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380 GYO_1752 118cc4c5f6b6ce72aeabc59c45e74269 151 SUPERFAMILY SSF52218 3 145 1.46E-40 T 14-10-2018 IPR029039 Flavoprotein-like superfamily GYO_1752 118cc4c5f6b6ce72aeabc59c45e74269 151 PRINTS PR00369 Flavodoxin signature 54 65 2.6E-6 T 14-10-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 GYO_1752 118cc4c5f6b6ce72aeabc59c45e74269 151 PRINTS PR00369 Flavodoxin signature 5 18 2.6E-6 T 14-10-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 GYO_1752 118cc4c5f6b6ce72aeabc59c45e74269 151 PRINTS PR00369 Flavodoxin signature 107 126 2.6E-6 T 14-10-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 GYO_1752 118cc4c5f6b6ce72aeabc59c45e74269 151 PRINTS PR00369 Flavodoxin signature 83 93 2.6E-6 T 14-10-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 GYO_1752 118cc4c5f6b6ce72aeabc59c45e74269 151 Pfam PF00258 Flavodoxin 6 138 2.4E-33 T 14-10-2018 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 GYO_1752 118cc4c5f6b6ce72aeabc59c45e74269 151 Gene3D G3DSA:3.40.50.360 1 147 5.8E-39 T 14-10-2018 IPR029039 Flavoprotein-like superfamily GYO_1752 118cc4c5f6b6ce72aeabc59c45e74269 151 ProSitePatterns PS00201 Flavodoxin signature. 6 22 - T 14-10-2018 IPR001226 Flavodoxin, conserved site GO:0009055|GO:0010181 GYO_1752 118cc4c5f6b6ce72aeabc59c45e74269 151 TIGRFAM TIGR01753 flav_short: flavodoxin 4 144 2.8E-53 T 14-10-2018 IPR010087 Flavodoxin, short chain GO:0010181 GYO_1988 714570dc49cd3e2bb31371d886421a56 120 Gene3D G3DSA:3.40.50.2300 2 120 6.9E-41 T 14-10-2018 GYO_1988 714570dc49cd3e2bb31371d886421a56 120 SMART SM00448 3 115 1.2E-40 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 GYO_1988 714570dc49cd3e2bb31371d886421a56 120 SUPERFAMILY SSF52172 4 119 1.02E-40 T 14-10-2018 IPR011006 CheY-like superfamily GYO_1988 714570dc49cd3e2bb31371d886421a56 120 Pfam PF00072 Response regulator receiver domain 5 116 1.4E-34 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 GYO_1613 90507b57c18bce42770570c59fbe5990 320 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 135 320 5.5E-30 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 GYO_1613 90507b57c18bce42770570c59fbe5990 320 SUPERFAMILY SSF161098 112 319 2.75E-27 T 14-10-2018 IPR035906 MetI-like superfamily GYO_1613 90507b57c18bce42770570c59fbe5990 320 Gene3D G3DSA:1.10.3720.10 106 320 3.9E-22 T 14-10-2018 IPR035906 MetI-like superfamily GYO_1613 90507b57c18bce42770570c59fbe5990 320 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 42 94 2.5E-19 T 14-10-2018 IPR025966 Oligopeptide transport permease C-like, N-terminal domain GYO_0989 eb05ea26f9980e24444c13aea00f51e5 254 Pfam PF00483 Nucleotidyl transferase 2 242 3.2E-17 T 14-10-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 GYO_0989 eb05ea26f9980e24444c13aea00f51e5 254 Gene3D G3DSA:3.90.550.10 1 254 2.1E-68 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases GYO_0989 eb05ea26f9980e24444c13aea00f51e5 254 SUPERFAMILY SSF53448 1 254 2.82E-61 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases GYO_0698 aa6e563382bf60b6688ddba9aff8e215 150 SMART SM00731 4 148 1.8E-62 T 14-10-2018 IPR006640 SprT-like GYO_0698 aa6e563382bf60b6688ddba9aff8e215 150 Pfam PF10263 SprT-like family 7 97 4.7E-13 T 14-10-2018 IPR006640 SprT-like GYO_0698 aa6e563382bf60b6688ddba9aff8e215 150 Pfam PF17283 SprT-like zinc ribbon domain 112 146 2.8E-7 T 14-10-2018 IPR035240 SprT-like, zinc ribbon domain GYO_0698 aa6e563382bf60b6688ddba9aff8e215 150 Hamap MF_00745 Protein SprT-like. 4 148 39.967 T 14-10-2018 IPR023524 Uncharacterised protein family SprT-like GYO_1434 55ffbad2786960edf95fb5bc0d6b9fc1 317 SUPERFAMILY SSF53822 25 268 2.83E-18 T 14-10-2018 IPR028082 Periplasmic binding protein-like I GYO_1434 55ffbad2786960edf95fb5bc0d6b9fc1 317 Gene3D G3DSA:3.40.50.2300 132 298 7.0E-80 T 14-10-2018 GYO_1434 55ffbad2786960edf95fb5bc0d6b9fc1 317 Gene3D G3DSA:3.40.50.2300 41 282 7.0E-80 T 14-10-2018 GYO_1434 55ffbad2786960edf95fb5bc0d6b9fc1 317 Pfam PF02608 ABC transporter substrate-binding protein PnrA-like 27 317 2.2E-91 T 14-10-2018 IPR003760 ABC transporter substrate-binding protein PnrA-like GO:0005886 GYO_1340 3c18877ca1736b1ccdca6a0ba5ded110 432 Pfam PF11563 Protoglobin 31 184 7.3E-40 T 14-10-2018 GYO_1340 3c18877ca1736b1ccdca6a0ba5ded110 432 Gene3D G3DSA:1.10.490.10 21 178 9.0E-45 T 14-10-2018 IPR012292 Globin/Protoglobin GO:0019825|GO:0020037 GYO_1340 3c18877ca1736b1ccdca6a0ba5ded110 432 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 245 421 1.7E-32 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 GYO_1340 3c18877ca1736b1ccdca6a0ba5ded110 432 SUPERFAMILY SSF46458 11 177 8.63E-44 T 14-10-2018 IPR009050 Globin-like superfamily GYO_1340 3c18877ca1736b1ccdca6a0ba5ded110 432 SUPERFAMILY SSF58104 148 430 1.27E-47 T 14-10-2018 GYO_1340 3c18877ca1736b1ccdca6a0ba5ded110 432 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 321 350 1.4E-15 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 GYO_1340 3c18877ca1736b1ccdca6a0ba5ded110 432 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 292 319 1.4E-15 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 GYO_1340 3c18877ca1736b1ccdca6a0ba5ded110 432 Gene3D G3DSA:1.10.287.950 237 432 2.5E-40 T 14-10-2018 GYO_1340 3c18877ca1736b1ccdca6a0ba5ded110 432 SMART SM00283 194 432 2.7E-23 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 GYO_3825 28a78b0a9cdf79ce2d6e61a9be710aee 245 Hamap MF_01014 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase [hisA]. 5 241 36.737 T 14-10-2018 IPR023016 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase GO:0000105|GO:0003949 KEGG: 00340+5.3.1.16 GYO_3825 28a78b0a9cdf79ce2d6e61a9be710aee 245 TIGRFAM TIGR00007 TIGR00007: 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase 6 238 1.7E-86 T 14-10-2018 IPR006063 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase HisA GO:0000105|GO:0003949 KEGG: 00340+5.3.1.16 GYO_3825 28a78b0a9cdf79ce2d6e61a9be710aee 245 Gene3D G3DSA:3.20.20.70 1 245 8.4E-88 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 GYO_3825 28a78b0a9cdf79ce2d6e61a9be710aee 245 Pfam PF00977 Histidine biosynthesis protein 6 234 3.5E-77 T 14-10-2018 IPR006062 Histidine biosynthesis GO:0000105 GYO_3825 28a78b0a9cdf79ce2d6e61a9be710aee 245 SUPERFAMILY SSF51366 5 240 4.37E-69 T 14-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 GYO_0433 4caf6119bfbcd8e0ffed87edc20b8786 631 SUPERFAMILY SSF55604 399 471 5.75E-20 T 14-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 GYO_0433 4caf6119bfbcd8e0ffed87edc20b8786 631 Pfam PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 499 621 3.3E-51 T 14-10-2018 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 GYO_0433 4caf6119bfbcd8e0ffed87edc20b8786 631 ProSitePatterns PS00371 PTS EIIA domains phosphorylation site signature 1. 561 573 - T 14-10-2018 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 GYO_0433 4caf6119bfbcd8e0ffed87edc20b8786 631 TIGRFAM TIGR00826 EIIB_glc: PTS system, glucose-like IIB component 372 458 8.0E-24 T 14-10-2018 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 GYO_0433 4caf6119bfbcd8e0ffed87edc20b8786 631 TIGRFAM TIGR02002 PTS-II-BC-glcB: PTS system, glucose-specific IIBC component 2 474 1.4E-182 T 14-10-2018 IPR011299 PTS system glucose-specific IIBC component GO:0005355|GO:0016021|GO:1904659 GYO_0433 4caf6119bfbcd8e0ffed87edc20b8786 631 Gene3D G3DSA:3.30.1360.60 395 474 4.7E-26 T 14-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 GYO_0433 4caf6119bfbcd8e0ffed87edc20b8786 631 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 412 429 - T 14-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 GYO_0433 4caf6119bfbcd8e0ffed87edc20b8786 631 SUPERFAMILY SSF51261 494 626 3.31E-52 T 14-10-2018 IPR011055 Duplicated hybrid motif GYO_0433 4caf6119bfbcd8e0ffed87edc20b8786 631 Pfam PF02378 Phosphotransferase system, EIIC 14 314 7.9E-82 T 14-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 GYO_0433 4caf6119bfbcd8e0ffed87edc20b8786 631 TIGRFAM TIGR00830 PTBA: PTS system, glucose subfamily, IIA component 501 619 8.0E-47 T 14-10-2018 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 GYO_0433 4caf6119bfbcd8e0ffed87edc20b8786 631 Pfam PF00367 phosphotransferase system, EIIB 403 433 2.2E-11 T 14-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 GYO_0433 4caf6119bfbcd8e0ffed87edc20b8786 631 Gene3D G3DSA:2.70.70.10 486 631 2.9E-56 T 14-10-2018 IPR011055 Duplicated hybrid motif GYO_3039 1b6220eeb3862b0e82cff87ab394e0db 264 Pfam PF01551 Peptidase family M23 167 257 1.5E-11 T 14-10-2018 IPR016047 Peptidase M23 GYO_3039 1b6220eeb3862b0e82cff87ab394e0db 264 Gene3D G3DSA:2.70.70.10 131 262 2.3E-12 T 14-10-2018 IPR011055 Duplicated hybrid motif GYO_3039 1b6220eeb3862b0e82cff87ab394e0db 264 SUPERFAMILY SSF51261 176 234 3.01E-8 T 14-10-2018 IPR011055 Duplicated hybrid motif GYO_1117 706786b76499e15fb271ec805958ee12 194 PIRSF PIRSF000232 8 193 6.5E-55 T 14-10-2018 IPR026021 Putative NAD(P)H nitroreductase YdjA-like GYO_1117 706786b76499e15fb271ec805958ee12 194 Gene3D G3DSA:3.40.109.10 5 192 4.0E-43 T 14-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 GYO_1117 706786b76499e15fb271ec805958ee12 194 Pfam PF00881 Nitroreductase family 17 174 3.8E-27 T 14-10-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 GYO_1117 706786b76499e15fb271ec805958ee12 194 SUPERFAMILY SSF55469 13 192 5.1E-38 T 14-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 GYO_0960 145a69f379a16f74fbfeb0ff1150c5f3 344 SUPERFAMILY SSF48208 20 338 3.57E-57 T 14-10-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 GYO_0960 145a69f379a16f74fbfeb0ff1150c5f3 344 Pfam PF07470 Glycosyl Hydrolase Family 88 20 338 5.5E-101 T 14-10-2018 IPR010905 Glycosyl hydrolase, family 88 GYO_0960 145a69f379a16f74fbfeb0ff1150c5f3 344 Gene3D G3DSA:1.50.10.10 4 339 3.2E-89 T 14-10-2018 IPR012341 Six-hairpin glycosidase-like superfamily GO:0003824 GYO_4321 02161c906cca194fd2599308a0e2978c 479 Gene3D G3DSA:3.40.50.300 207 368 4.1E-54 T 14-10-2018 GYO_4321 02161c906cca194fd2599308a0e2978c 479 Pfam PF00270 DEAD/DEAH box helicase 26 192 2.6E-47 T 14-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 GYO_4321 02161c906cca194fd2599308a0e2978c 479 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 149 157 - T 14-10-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site GYO_4321 02161c906cca194fd2599308a0e2978c 479 SMART SM00490 254 335 5.2E-34 T 14-10-2018 IPR001650 Helicase, C-terminal GYO_4321 02161c906cca194fd2599308a0e2978c 479 Gene3D G3DSA:3.30.70.330 404 479 1.1E-29 T 14-10-2018 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily GYO_4321 02161c906cca194fd2599308a0e2978c 479 Pfam PF00271 Helicase conserved C-terminal domain 227 335 7.3E-29 T 14-10-2018 IPR001650 Helicase, C-terminal GYO_4321 02161c906cca194fd2599308a0e2978c 479 SMART SM00487 21 218 2.1E-60 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain GYO_4321 02161c906cca194fd2599308a0e2978c 479 SUPERFAMILY SSF52540 69 356 3.86E-75 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase GYO_4321 02161c906cca194fd2599308a0e2978c 479 Pfam PF03880 DbpA RNA binding domain 405 475 7.7E-20 T 14-10-2018 IPR005580 DEAD box helicase DbpA/CsdA, RNA-binding domain GYO_4321 02161c906cca194fd2599308a0e2978c 479 Hamap MF_00965 ATP-dependent RNA helicase DbpA [dbpA]. 4 478 80.266 T 14-10-2018 IPR028619 ATP-dependent RNA helicase DbpA GO:0000027|GO:0003724 GYO_4321 02161c906cca194fd2599308a0e2978c 479 Gene3D G3DSA:3.40.50.300 2 206 5.9E-73 T 14-10-2018 GYO_4115 c1cf1f77b1ced8ede3602c3f475160b5 142 SUPERFAMILY SSF50814 1 138 6.86E-41 T 14-10-2018 IPR012674 Calycin GYO_4115 c1cf1f77b1ced8ede3602c3f475160b5 142 Gene3D G3DSA:2.40.128.20 1 142 1.8E-53 T 14-10-2018 IPR012674 Calycin GYO_4115 c1cf1f77b1ced8ede3602c3f475160b5 142 Pfam PF09148 Domain of unknown function (DUF1934) 10 134 2.7E-31 T 14-10-2018 IPR015231 Protein of unknown function DUF1934 GYO_4087 8549eb946fecdd6fccd187be735e2e1f 429 Pfam PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) 8 406 3.1E-98 T 14-10-2018 IPR001986 Enolpyruvate transferase domain GO:0016765 GYO_4087 8549eb946fecdd6fccd187be735e2e1f 429 Hamap MF_00111 UDP-N-acetylglucosamine 1-carboxyvinyltransferase [murA]. 1 416 42.593 T 14-10-2018 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase GO:0008760|GO:0019277 KEGG: 00520+2.5.1.7|KEGG: 00550+2.5.1.7|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 GYO_4087 8549eb946fecdd6fccd187be735e2e1f 429 Gene3D G3DSA:3.65.10.10 21 228 1.7E-160 T 14-10-2018 IPR036968 Enolpyruvate transferase domain superfamily GO:0016765 GYO_4087 8549eb946fecdd6fccd187be735e2e1f 429 Gene3D G3DSA:3.65.10.10 6 413 1.7E-160 T 14-10-2018 IPR036968 Enolpyruvate transferase domain superfamily GO:0016765 GYO_4087 8549eb946fecdd6fccd187be735e2e1f 429 TIGRFAM TIGR01072 murA: UDP-N-acetylglucosamine 1-carboxyvinyltransferase 1 415 2.8E-176 T 14-10-2018 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase GO:0008760|GO:0019277 KEGG: 00520+2.5.1.7|KEGG: 00550+2.5.1.7|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 GYO_4087 8549eb946fecdd6fccd187be735e2e1f 429 SUPERFAMILY SSF55205 1 416 1.03E-136 T 14-10-2018 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta GO:0003824 GYO_4519 110f62e7ba9d7977fe05e919fe88cd1c 253 Hamap MF_01811 Membrane protein insertase YidC [yidC]. 1 240 31.077 T 14-10-2018 IPR023060 Membrane insertase YidC/YidC1/YidC2, Firmicutes GO:0016021|GO:0032977 GYO_4519 110f62e7ba9d7977fe05e919fe88cd1c 253 Pfam PF02096 60Kd inner membrane protein 53 235 2.3E-62 T 14-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 GYO_4519 110f62e7ba9d7977fe05e919fe88cd1c 253 PRINTS PR00701 60kDa inner membrane protein signature 118 141 2.0E-15 T 14-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 GYO_4519 110f62e7ba9d7977fe05e919fe88cd1c 253 PRINTS PR00701 60kDa inner membrane protein signature 202 225 2.0E-15 T 14-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 GYO_4519 110f62e7ba9d7977fe05e919fe88cd1c 253 TIGRFAM TIGR03592 yidC_oxa1_cterm: membrane protein insertase, YidC/Oxa1 family 52 235 9.2E-69 T 14-10-2018 IPR028055 Membrane insertase YidC/Oxa1, C-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 GYO_4519 110f62e7ba9d7977fe05e919fe88cd1c 253 PRINTS PR01900 YidC translocation/secretion protein signature 191 215 5.4E-6 T 14-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 GYO_4519 110f62e7ba9d7977fe05e919fe88cd1c 253 PRINTS PR01900 YidC translocation/secretion protein signature 169 184 5.4E-6 T 14-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 GYO_2015 f72b1eadd2014d7cec4e9dcaee956dad 372 Hamap MF_00945_B Transcription termination/antitermination protein NusA [nusA]. 2 372 30.88 T 14-10-2018 IPR030842 Transcription termination/antitermination protein NusA, bacterial GO:0006353|GO:0031564 GYO_2015 f72b1eadd2014d7cec4e9dcaee956dad 372 Gene3D G3DSA:3.30.300.20 198 276 1.0E-33 T 14-10-2018 IPR015946 K homology domain-like, alpha/beta GYO_2015 f72b1eadd2014d7cec4e9dcaee956dad 372 TIGRFAM TIGR01953 NusA: transcription termination factor NusA 5 341 3.4E-130 T 14-10-2018 IPR010213 Transcription termination factor NusA GO:0003723 GYO_2015 f72b1eadd2014d7cec4e9dcaee956dad 372 SUPERFAMILY SSF54814 278 341 1.24E-16 T 14-10-2018 IPR009019 K homology domain superfamily, prokaryotic type GO:0003723 GYO_2015 f72b1eadd2014d7cec4e9dcaee956dad 372 Gene3D G3DSA:3.30.300.20 278 371 5.7E-33 T 14-10-2018 IPR015946 K homology domain-like, alpha/beta GYO_2015 f72b1eadd2014d7cec4e9dcaee956dad 372 Pfam PF08529 NusA N-terminal domain 4 123 1.8E-45 T 14-10-2018 IPR013735 Transcription factor NusA, N-terminal GO:0003700|GO:0031554 GYO_2015 f72b1eadd2014d7cec4e9dcaee956dad 372 SMART SM00316 133 199 7.6E-12 T 14-10-2018 IPR022967 RNA-binding domain, S1 GYO_2015 f72b1eadd2014d7cec4e9dcaee956dad 372 SMART SM00322 229 301 2.6E-5 T 14-10-2018 IPR004087 K Homology domain GO:0003676 GYO_2015 f72b1eadd2014d7cec4e9dcaee956dad 372 SMART SM00322 302 356 9.4 T 14-10-2018 IPR004087 K Homology domain GO:0003676 GYO_2015 f72b1eadd2014d7cec4e9dcaee956dad 372 Gene3D G3DSA:3.30.1480.10 1 124 2.7E-51 T 14-10-2018 IPR036555 NusA, N-terminal domain superfamily GO:0003700|GO:0031554 GYO_2015 f72b1eadd2014d7cec4e9dcaee956dad 372 Pfam PF13184 NusA-like KH domain 229 296 9.0E-29 T 14-10-2018 IPR025249 KH domain, NusA-like GO:0003723 GYO_2015 f72b1eadd2014d7cec4e9dcaee956dad 372 SUPERFAMILY SSF54814 199 276 2.49E-30 T 14-10-2018 IPR009019 K homology domain superfamily, prokaryotic type GO:0003723 GYO_2015 f72b1eadd2014d7cec4e9dcaee956dad 372 SUPERFAMILY SSF69705 1 126 2.22E-44 T 14-10-2018 IPR036555 NusA, N-terminal domain superfamily GO:0003700|GO:0031554 GYO_2015 f72b1eadd2014d7cec4e9dcaee956dad 372 Pfam PF00575 S1 RNA binding domain 133 195 2.0E-13 T 14-10-2018 IPR003029 S1 domain GO:0003676 GYO_2015 f72b1eadd2014d7cec4e9dcaee956dad 372 Gene3D G3DSA:2.40.50.140 136 197 1.7E-25 T 14-10-2018 GYO_2015 f72b1eadd2014d7cec4e9dcaee956dad 372 SUPERFAMILY SSF50249 132 198 2.09E-20 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold GYO_3951 3bdd47bd899d7eb3572c0c0e3dd4df27 293 Pfam PF00294 pfkB family carbohydrate kinase 1 284 1.8E-77 T 14-10-2018 IPR011611 Carbohydrate kinase PfkB GYO_3951 3bdd47bd899d7eb3572c0c0e3dd4df27 293 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 236 249 - T 14-10-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 GYO_3951 3bdd47bd899d7eb3572c0c0e3dd4df27 293 Hamap MF_01987 Ribokinase [rbsK]. 2 291 24.412 T 14-10-2018 IPR011877 Ribokinase GO:0004747|GO:0006014 KEGG: 00030+2.7.1.15|Reactome: R-HSA-71336 GYO_3951 3bdd47bd899d7eb3572c0c0e3dd4df27 293 Gene3D G3DSA:3.40.1190.20 1 291 3.1E-93 T 14-10-2018 IPR029056 Ribokinase-like GYO_3951 3bdd47bd899d7eb3572c0c0e3dd4df27 293 PRINTS PR00990 Ribokinase signature 6 27 7.9E-36 T 14-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 GYO_3951 3bdd47bd899d7eb3572c0c0e3dd4df27 293 PRINTS PR00990 Ribokinase signature 207 218 7.9E-36 T 14-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 GYO_3951 3bdd47bd899d7eb3572c0c0e3dd4df27 293 PRINTS PR00990 Ribokinase signature 172 187 7.9E-36 T 14-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 GYO_3951 3bdd47bd899d7eb3572c0c0e3dd4df27 293 PRINTS PR00990 Ribokinase signature 33 52 7.9E-36 T 14-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 GYO_3951 3bdd47bd899d7eb3572c0c0e3dd4df27 293 PRINTS PR00990 Ribokinase signature 104 117 7.9E-36 T 14-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 GYO_3951 3bdd47bd899d7eb3572c0c0e3dd4df27 293 TIGRFAM TIGR02152 D_ribokin_bact: ribokinase 4 290 7.8E-107 T 14-10-2018 IPR011877 Ribokinase GO:0004747|GO:0006014 KEGG: 00030+2.7.1.15|Reactome: R-HSA-71336 GYO_3951 3bdd47bd899d7eb3572c0c0e3dd4df27 293 SUPERFAMILY SSF53613 1 292 4.52E-79 T 14-10-2018 IPR029056 Ribokinase-like GYO_2312 b9eda615b5d82d5c8f4b9fb7d5ebdb55 225 Gene3D G3DSA:1.10.530.10 47 203 1.9E-46 T 14-10-2018 GYO_2312 b9eda615b5d82d5c8f4b9fb7d5ebdb55 225 Pfam PF13702 Lysozyme-like 50 203 5.7E-59 T 14-10-2018 GYO_2312 b9eda615b5d82d5c8f4b9fb7d5ebdb55 225 SUPERFAMILY SSF53955 54 158 3.09E-8 T 14-10-2018 IPR023346 Lysozyme-like domain superfamily GYO_3924 410ba16a1848d4c561eb6c02883f9bbb 527 SUPERFAMILY SSF52540 23 236 1.27E-45 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase GYO_3924 410ba16a1848d4c561eb6c02883f9bbb 527 Pfam PF00005 ABC transporter 40 170 9.9E-19 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 GYO_3924 410ba16a1848d4c561eb6c02883f9bbb 527 SMART SM00382 48 236 3.4E-8 T 14-10-2018 IPR003593 AAA+ ATPase domain GYO_3924 410ba16a1848d4c561eb6c02883f9bbb 527 ProSitePatterns PS00211 ABC transporters family signature. 143 157 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 GYO_3924 410ba16a1848d4c561eb6c02883f9bbb 527 Gene3D G3DSA:3.40.50.300 5 278 2.5E-46 T 14-10-2018 GYO_4307 d3befe1311a9489a280cd2cdbf5670bb 397 Pfam PF01773 Na+ dependent nucleoside transporter N-terminus 8 80 6.2E-18 T 14-10-2018 IPR002668 Concentrative nucleoside transporter N-terminal domain Reactome: R-HSA-83936 GYO_4307 d3befe1311a9489a280cd2cdbf5670bb 397 Pfam PF07662 Na+ dependent nucleoside transporter C-terminus 192 395 1.8E-51 T 14-10-2018 IPR011657 Concentrative nucleoside transporter C-terminal domain Reactome: R-HSA-83936 GYO_4307 d3befe1311a9489a280cd2cdbf5670bb 397 TIGRFAM TIGR00804 nupC: nucleoside transporter, NupC family 4 395 9.2E-144 T 14-10-2018 IPR018270 Concentrative nucleoside transporter, metazoan/bacterial GO:0005337|GO:0016020|GO:1901642 Reactome: R-HSA-83936 GYO_2457 ba4c30bee81f430aa4fe930876e58443 206 Gene3D G3DSA:3.40.1350.10 34 206 4.6E-75 T 14-10-2018 IPR011856 tRNA endonuclease-like domain superfamily GO:0003676|GO:0004518 GYO_2457 ba4c30bee81f430aa4fe930876e58443 206 TIGRFAM TIGR00648 recU: recombination protein U 30 196 1.0E-92 T 14-10-2018 IPR004612 Holliday junction resolvase RecU GO:0005737|GO:0006281|GO:0006310 GYO_2457 ba4c30bee81f430aa4fe930876e58443 206 SUPERFAMILY SSF52980 34 197 1.58E-65 T 14-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 GYO_2457 ba4c30bee81f430aa4fe930876e58443 206 PIRSF PIRSF037785 23 204 1.4E-77 T 14-10-2018 IPR004612 Holliday junction resolvase RecU GO:0005737|GO:0006281|GO:0006310 GYO_2457 ba4c30bee81f430aa4fe930876e58443 206 Hamap MF_00130 Holliday junction resolvase RecU [recU]. 1 206 99.253 T 14-10-2018 IPR004612 Holliday junction resolvase RecU GO:0005737|GO:0006281|GO:0006310 GYO_2457 ba4c30bee81f430aa4fe930876e58443 206 Pfam PF03838 Recombination protein U 31 193 1.4E-64 T 14-10-2018 IPR004612 Holliday junction resolvase RecU GO:0005737|GO:0006281|GO:0006310 GYO_1309 5304f11d1bd21f8604e90ee8118468ea 310 Hamap MF_00323 Ferrochelatase [hemH]. 4 308 32.504 T 14-10-2018 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|Reactome: R-HSA-189451 GYO_1309 5304f11d1bd21f8604e90ee8118468ea 310 Gene3D G3DSA:3.40.50.1400 8 304 7.2E-111 T 14-10-2018 GYO_1309 5304f11d1bd21f8604e90ee8118468ea 310 Pfam PF00762 Ferrochelatase 5 307 2.0E-83 T 14-10-2018 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|Reactome: R-HSA-189451 GYO_1309 5304f11d1bd21f8604e90ee8118468ea 310 ProSitePatterns PS00534 Ferrochelatase signature. 178 196 - T 14-10-2018 IPR019772 Ferrochelatase, active site GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|Reactome: R-HSA-189451 GYO_1309 5304f11d1bd21f8604e90ee8118468ea 310 Gene3D G3DSA:3.40.50.1400 148 289 7.2E-111 T 14-10-2018 GYO_1309 5304f11d1bd21f8604e90ee8118468ea 310 TIGRFAM TIGR00109 hemH: ferrochelatase 2 308 6.2E-115 T 14-10-2018 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|Reactome: R-HSA-189451 GYO_1309 5304f11d1bd21f8604e90ee8118468ea 310 SUPERFAMILY SSF53800 3 308 5.89E-91 T 14-10-2018 GYO_4046 6e3acf0c7b5d5d457b3af45164296d41 227 SMART SM00327 34 226 2.1E-23 T 14-10-2018 IPR002035 von Willebrand factor, type A GYO_4046 6e3acf0c7b5d5d457b3af45164296d41 227 Gene3D G3DSA:3.40.50.410 28 225 4.7E-35 T 14-10-2018 IPR036465 von Willebrand factor A-like domain superfamily GYO_4046 6e3acf0c7b5d5d457b3af45164296d41 227 Pfam PF00092 von Willebrand factor type A domain 36 219 3.8E-26 T 14-10-2018 IPR002035 von Willebrand factor, type A GYO_4046 6e3acf0c7b5d5d457b3af45164296d41 227 SUPERFAMILY SSF53300 26 220 5.34E-30 T 14-10-2018 IPR036465 von Willebrand factor A-like domain superfamily GYO_3694 c5b717c904d8e5b6c7fdc6eb3ba49863 441 Gene3D G3DSA:1.50.10.20 21 441 5.8E-120 T 14-10-2018 GYO_3694 c5b717c904d8e5b6c7fdc6eb3ba49863 441 SMART SM01260 47 440 2.7E-55 T 14-10-2018 IPR007822 Lanthionine synthetase C-like GYO_3694 c5b717c904d8e5b6c7fdc6eb3ba49863 441 PRINTS PR01950 LanC-like protein superfamily signature 50 68 3.5E-24 T 14-10-2018 IPR007822 Lanthionine synthetase C-like GYO_3694 c5b717c904d8e5b6c7fdc6eb3ba49863 441 PRINTS PR01950 LanC-like protein superfamily signature 226 242 3.5E-24 T 14-10-2018 IPR007822 Lanthionine synthetase C-like GYO_3694 c5b717c904d8e5b6c7fdc6eb3ba49863 441 PRINTS PR01950 LanC-like protein superfamily signature 410 427 3.5E-24 T 14-10-2018 IPR007822 Lanthionine synthetase C-like GYO_3694 c5b717c904d8e5b6c7fdc6eb3ba49863 441 PRINTS PR01950 LanC-like protein superfamily signature 299 319 3.5E-24 T 14-10-2018 IPR007822 Lanthionine synthetase C-like GYO_3694 c5b717c904d8e5b6c7fdc6eb3ba49863 441 PRINTS PR01950 LanC-like protein superfamily signature 154 169 3.5E-24 T 14-10-2018 IPR007822 Lanthionine synthetase C-like GYO_3694 c5b717c904d8e5b6c7fdc6eb3ba49863 441 PRINTS PR01950 LanC-like protein superfamily signature 346 359 3.5E-24 T 14-10-2018 IPR007822 Lanthionine synthetase C-like GYO_3694 c5b717c904d8e5b6c7fdc6eb3ba49863 441 Pfam PF05147 Lanthionine synthetase C-like protein 48 440 9.5E-90 T 14-10-2018 IPR007822 Lanthionine synthetase C-like GYO_3694 c5b717c904d8e5b6c7fdc6eb3ba49863 441 SUPERFAMILY SSF158745 21 441 9.42E-89 T 14-10-2018 GYO_3694 c5b717c904d8e5b6c7fdc6eb3ba49863 441 PRINTS PR01953 Subtilin biosynthesis protein SpaC signature 183 207 2.4E-84 T 14-10-2018 IPR020452 Subtilin biosynthesis protein SpaC GYO_3694 c5b717c904d8e5b6c7fdc6eb3ba49863 441 PRINTS PR01953 Subtilin biosynthesis protein SpaC signature 385 403 2.4E-84 T 14-10-2018 IPR020452 Subtilin biosynthesis protein SpaC GYO_3694 c5b717c904d8e5b6c7fdc6eb3ba49863 441 PRINTS PR01953 Subtilin biosynthesis protein SpaC signature 262 286 2.4E-84 T 14-10-2018 IPR020452 Subtilin biosynthesis protein SpaC GYO_3694 c5b717c904d8e5b6c7fdc6eb3ba49863 441 PRINTS PR01953 Subtilin biosynthesis protein SpaC signature 122 147 2.4E-84 T 14-10-2018 IPR020452 Subtilin biosynthesis protein SpaC GYO_3694 c5b717c904d8e5b6c7fdc6eb3ba49863 441 PRINTS PR01953 Subtilin biosynthesis protein SpaC signature 318 346 2.4E-84 T 14-10-2018 IPR020452 Subtilin biosynthesis protein SpaC GYO_3694 c5b717c904d8e5b6c7fdc6eb3ba49863 441 PRINTS PR01953 Subtilin biosynthesis protein SpaC signature 30 48 2.4E-84 T 14-10-2018 IPR020452 Subtilin biosynthesis protein SpaC GYO_3694 c5b717c904d8e5b6c7fdc6eb3ba49863 441 PRINTS PR01953 Subtilin biosynthesis protein SpaC signature 67 84 2.4E-84 T 14-10-2018 IPR020452 Subtilin biosynthesis protein SpaC GYO_3694 c5b717c904d8e5b6c7fdc6eb3ba49863 441 PRINTS PR01953 Subtilin biosynthesis protein SpaC signature 210 226 2.4E-84 T 14-10-2018 IPR020452 Subtilin biosynthesis protein SpaC GYO_2444 8041a9aa932f3f443b8b57d46f35649d 98 Pfam PF05103 DivIVA protein 8 68 1.0E-15 T 14-10-2018 IPR007793 DivIVA family GYO_2444 8041a9aa932f3f443b8b57d46f35649d 98 TIGRFAM TIGR03544 DivI1A_domain: DivIVA domain 8 41 8.4E-14 T 14-10-2018 IPR019933 DivIVA domain GYO_2444 8041a9aa932f3f443b8b57d46f35649d 98 PIRSF PIRSF029938 1 98 1.3E-38 T 14-10-2018 IPR011229 Cell cycle protein GpsB GYO_2444 8041a9aa932f3f443b8b57d46f35649d 98 Hamap MF_02011 Cell cycle protein GpsB [gpsB]. 3 94 24.046 T 14-10-2018 IPR011229 Cell cycle protein GpsB GYO_1910 848fd0f5116572473bc37ff04dbf1ff7 257 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 3 214 1.9E-51 T 14-10-2018 IPR000878 Tetrapyrrole methylase GO:0008168 Reactome: R-HSA-5358493 GYO_1910 848fd0f5116572473bc37ff04dbf1ff7 257 Gene3D G3DSA:3.40.1010.10 1 117 9.7E-48 T 14-10-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008168 Reactome: R-HSA-5358493 GYO_1910 848fd0f5116572473bc37ff04dbf1ff7 257 ProSitePatterns PS00839 Uroporphyrin-III C-methyltransferase signature 1. 7 21 - T 14-10-2018 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 GYO_1910 848fd0f5116572473bc37ff04dbf1ff7 257 ProSitePatterns PS00840 Uroporphyrin-III C-methyltransferase signature 2. 82 115 - T 14-10-2018 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 GYO_1910 848fd0f5116572473bc37ff04dbf1ff7 257 SUPERFAMILY SSF53790 1 246 2.62E-84 T 14-10-2018 IPR035996 Tetrapyrrole methylase superfamily GO:0008168 Reactome: R-HSA-5358493 GYO_1910 848fd0f5116572473bc37ff04dbf1ff7 257 TIGRFAM TIGR01469 cobA_cysG_Cterm: uroporphyrinogen-III C-methyltransferase 2 238 2.1E-104 T 14-10-2018 IPR006366 Uroporphyrin-III C-methyltransferase GO:0008168|GO:0019354 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 GYO_1910 848fd0f5116572473bc37ff04dbf1ff7 257 Gene3D G3DSA:3.30.950.10 118 256 1.5E-44 T 14-10-2018 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008168 Reactome: R-HSA-5358493 GYO_3510 57ecc1231135d14ee328c859b2369271 284 TIGRFAM TIGR00652 DapF: diaminopimelate epimerase 5 283 1.8E-101 T 14-10-2018 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 GYO_3510 57ecc1231135d14ee328c859b2369271 284 Hamap MF_00197 Diaminopimelate epimerase [dapF]. 4 284 38.435 T 14-10-2018 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 GYO_3510 57ecc1231135d14ee328c859b2369271 284 ProSitePatterns PS01326 Diaminopimelate epimerase signature. 67 81 - T 14-10-2018 IPR018510 Diaminopimelate epimerase, active site GO:0005737|GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 GYO_3510 57ecc1231135d14ee328c859b2369271 284 SUPERFAMILY SSF54506 3 280 5.27E-52 T 14-10-2018 GYO_3510 57ecc1231135d14ee328c859b2369271 284 Gene3D G3DSA:3.10.310.10 6 280 5.7E-112 T 14-10-2018 GYO_3510 57ecc1231135d14ee328c859b2369271 284 Gene3D G3DSA:3.10.310.10 126 274 5.7E-112 T 14-10-2018 GYO_3510 57ecc1231135d14ee328c859b2369271 284 Pfam PF01678 Diaminopimelate epimerase 161 276 1.3E-34 T 14-10-2018 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 GYO_3510 57ecc1231135d14ee328c859b2369271 284 Pfam PF01678 Diaminopimelate epimerase 6 130 7.4E-35 T 14-10-2018 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 GYO_1750 ca5d4ef86ee2b35a9e4df011a88fae4f 158 PRINTS PR00369 Flavodoxin signature 5 18 2.4E-5 T 14-10-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 GYO_1750 ca5d4ef86ee2b35a9e4df011a88fae4f 158 PRINTS PR00369 Flavodoxin signature 82 92 2.4E-5 T 14-10-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 GYO_1750 ca5d4ef86ee2b35a9e4df011a88fae4f 158 PRINTS PR00369 Flavodoxin signature 53 64 2.4E-5 T 14-10-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 GYO_1750 ca5d4ef86ee2b35a9e4df011a88fae4f 158 Gene3D G3DSA:3.40.50.360 1 146 1.3E-36 T 14-10-2018 IPR029039 Flavoprotein-like superfamily GYO_1750 ca5d4ef86ee2b35a9e4df011a88fae4f 158 SUPERFAMILY SSF52218 1 146 5.71E-39 T 14-10-2018 IPR029039 Flavoprotein-like superfamily GYO_1750 ca5d4ef86ee2b35a9e4df011a88fae4f 158 Pfam PF00258 Flavodoxin 6 137 2.8E-30 T 14-10-2018 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 GYO_1750 ca5d4ef86ee2b35a9e4df011a88fae4f 158 TIGRFAM TIGR01753 flav_short: flavodoxin 5 143 1.8E-52 T 14-10-2018 IPR010087 Flavodoxin, short chain GO:0010181 GYO_0320 1d0c73acab3c10ac6a3f0facce18ca88 326 Gene3D G3DSA:3.55.50.10 86 172 1.6E-9 T 14-10-2018 GYO_0320 1d0c73acab3c10ac6a3f0facce18ca88 326 Gene3D G3DSA:2.30.300.10 20 195 1.6E-9 T 14-10-2018 GYO_0320 1d0c73acab3c10ac6a3f0facce18ca88 326 SUPERFAMILY SSF69279 19 150 8.5E-12 T 14-10-2018 GYO_0320 1d0c73acab3c10ac6a3f0facce18ca88 326 Gene3D G3DSA:3.30.1920.10 196 259 1.6E-9 T 14-10-2018 IPR023399 Baseplate-like, two-layer sandwich fold GYO_0241 1d0c73acab3c10ac6a3f0facce18ca88 326 Gene3D G3DSA:3.55.50.10 86 172 1.6E-9 T 14-10-2018 GYO_0241 1d0c73acab3c10ac6a3f0facce18ca88 326 Gene3D G3DSA:2.30.300.10 20 195 1.6E-9 T 14-10-2018 GYO_0241 1d0c73acab3c10ac6a3f0facce18ca88 326 SUPERFAMILY SSF69279 19 150 8.5E-12 T 14-10-2018 GYO_0241 1d0c73acab3c10ac6a3f0facce18ca88 326 Gene3D G3DSA:3.30.1920.10 196 259 1.6E-9 T 14-10-2018 IPR023399 Baseplate-like, two-layer sandwich fold GYO_0770 bee90fcfbfc58471ae32183e9b75d5ef 482 SUPERFAMILY SSF53383 103 478 3.06E-88 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase GYO_0770 bee90fcfbfc58471ae32183e9b75d5ef 482 Pfam PF00155 Aminotransferase class I and II 120 467 1.2E-30 T 14-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 GYO_0770 bee90fcfbfc58471ae32183e9b75d5ef 482 Pfam PF00392 Bacterial regulatory proteins, gntR family 14 77 1.4E-14 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 GYO_0770 bee90fcfbfc58471ae32183e9b75d5ef 482 Gene3D G3DSA:1.10.10.10 5 78 3.0E-21 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily GYO_0770 bee90fcfbfc58471ae32183e9b75d5ef 482 Gene3D G3DSA:3.40.640.10 154 373 1.1E-105 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 GYO_0770 bee90fcfbfc58471ae32183e9b75d5ef 482 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 37 51 4.0E-7 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 GYO_0770 bee90fcfbfc58471ae32183e9b75d5ef 482 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 51 67 4.0E-7 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 GYO_0770 bee90fcfbfc58471ae32183e9b75d5ef 482 Gene3D G3DSA:3.90.1150.10 115 476 1.1E-105 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 GYO_0770 bee90fcfbfc58471ae32183e9b75d5ef 482 SMART SM00345 18 77 3.9E-13 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 GYO_0770 bee90fcfbfc58471ae32183e9b75d5ef 482 SUPERFAMILY SSF46785 9 87 9.25E-21 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily GYO_1793 0b427e37e62a545515cc9d6488dc1e29 184 SUPERFAMILY SSF56420 2 178 9.94E-59 T 14-10-2018 IPR036821 Peptide deformylase superfamily GYO_1793 0b427e37e62a545515cc9d6488dc1e29 184 Hamap MF_00163 Peptide deformylase [def]. 3 182 27.504 T 14-10-2018 IPR023635 Peptide deformylase GYO_1793 0b427e37e62a545515cc9d6488dc1e29 184 PRINTS PR01576 Peptide deformylase signature 47 76 3.1E-31 T 14-10-2018 IPR023635 Peptide deformylase GYO_1793 0b427e37e62a545515cc9d6488dc1e29 184 PRINTS PR01576 Peptide deformylase signature 140 169 3.1E-31 T 14-10-2018 IPR023635 Peptide deformylase GYO_1793 0b427e37e62a545515cc9d6488dc1e29 184 PRINTS PR01576 Peptide deformylase signature 121 139 3.1E-31 T 14-10-2018 IPR023635 Peptide deformylase GYO_1793 0b427e37e62a545515cc9d6488dc1e29 184 PRINTS PR01576 Peptide deformylase signature 108 119 3.1E-31 T 14-10-2018 IPR023635 Peptide deformylase GYO_1793 0b427e37e62a545515cc9d6488dc1e29 184 PIRSF PIRSF004749 2 184 1.5E-48 T 14-10-2018 IPR023635 Peptide deformylase GYO_1793 0b427e37e62a545515cc9d6488dc1e29 184 Pfam PF01327 Polypeptide deformylase 4 171 1.1E-46 T 14-10-2018 IPR023635 Peptide deformylase GYO_1793 0b427e37e62a545515cc9d6488dc1e29 184 Gene3D G3DSA:3.90.45.10 1 184 3.6E-67 T 14-10-2018 IPR036821 Peptide deformylase superfamily GYO_1793 0b427e37e62a545515cc9d6488dc1e29 184 TIGRFAM TIGR00079 pept_deformyl: peptide deformylase 4 180 1.1E-57 T 14-10-2018 IPR023635 Peptide deformylase GYO_4163 1b3370e26efa38e1d7454c4858f6e377 566 PIRSF PIRSF010386 4 557 7.3E-236 T 14-10-2018 IPR012166 Uncharacterised protein family RocB GYO_4163 1b3370e26efa38e1d7454c4858f6e377 566 Gene3D G3DSA:3.40.630.10 11 230 4.9E-25 T 14-10-2018 GYO_4163 1b3370e26efa38e1d7454c4858f6e377 566 SUPERFAMILY SSF53187 8 460 1.23E-24 T 14-10-2018 GYO_4163 1b3370e26efa38e1d7454c4858f6e377 566 Pfam PF01546 Peptidase family M20/M25/M40 124 205 8.2E-10 T 14-10-2018 IPR002933 Peptidase M20 GO:0016787 GYO_1264 89f86156af843b976e4c1f91908ee10a 206 Gene3D G3DSA:3.40.50.720 1 201 1.1E-38 T 14-10-2018 GYO_1264 89f86156af843b976e4c1f91908ee10a 206 SUPERFAMILY SSF51735 1 199 8.48E-28 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily GYO_1264 89f86156af843b976e4c1f91908ee10a 206 Pfam PF13460 NAD(P)H-binding 7 191 7.4E-35 T 14-10-2018 IPR016040 NAD(P)-binding domain GYO_1703 624d766045a46ce66526773207f720d3 243 TIGRFAM TIGR03365 Bsubt_queE: 7-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE 4 243 5.8E-118 T 14-10-2018 IPR017742 7-carboxy-7-deazaguanine synthase KEGG: 00790+4.3.99.3|MetaCyc: PWY-6703 GYO_1703 624d766045a46ce66526773207f720d3 243 Gene3D G3DSA:3.20.20.70 5 189 6.3E-32 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 GYO_1703 624d766045a46ce66526773207f720d3 243 SUPERFAMILY SSF102114 27 118 2.22E-13 T 14-10-2018 GYO_1703 624d766045a46ce66526773207f720d3 243 Pfam PF13394 4Fe-4S single cluster domain 27 113 3.2E-10 T 14-10-2018 GYO_1703 624d766045a46ce66526773207f720d3 243 Pfam PF04055 Radical SAM superfamily 29 125 4.3E-12 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 GYO_1703 624d766045a46ce66526773207f720d3 243 Hamap MF_00917 7-carboxy-7-deazaguanine synthase [queE]. 5 240 39.57 T 14-10-2018 IPR024924 7-carboxy-7-deazaguanine synthase-like KEGG: 00790+4.3.99.3|MetaCyc: PWY-6703 GYO_1703 624d766045a46ce66526773207f720d3 243 PIRSF PIRSF000370 3 243 3.3E-51 T 14-10-2018 IPR024924 7-carboxy-7-deazaguanine synthase-like KEGG: 00790+4.3.99.3|MetaCyc: PWY-6703 GYO_4246 d532bfdf5efa21a1b1d8027fbfa3ff93 210 SUPERFAMILY SSF81301 18 208 9.97E-57 T 14-10-2018 GYO_4246 d532bfdf5efa21a1b1d8027fbfa3ff93 210 Gene3D G3DSA:1.10.287.860 163 210 3.2E-18 T 14-10-2018 GYO_4246 d532bfdf5efa21a1b1d8027fbfa3ff93 210 SMART SM00954 57 180 4.5E-47 T 14-10-2018 IPR007685 RelA/SpoT GO:0015969 GYO_4246 d532bfdf5efa21a1b1d8027fbfa3ff93 210 Gene3D G3DSA:3.30.460.10 12 161 3.5E-51 T 14-10-2018 GYO_4246 d532bfdf5efa21a1b1d8027fbfa3ff93 210 Pfam PF04607 Region found in RelA / SpoT proteins 57 178 1.0E-38 T 14-10-2018 IPR007685 RelA/SpoT GO:0015969 GYO_0768 b70e3d9d5ecd10e914e0941622bc321b 237 Pfam PF00486 Transcriptional regulatory protein, C terminal 163 231 5.6E-26 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 GYO_0768 b70e3d9d5ecd10e914e0941622bc321b 237 Gene3D G3DSA:3.40.50.2300 2 128 3.9E-34 T 14-10-2018 GYO_0768 b70e3d9d5ecd10e914e0941622bc321b 237 SMART SM00448 8 118 2.9E-40 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 GYO_0768 b70e3d9d5ecd10e914e0941622bc321b 237 SUPERFAMILY SSF46894 136 231 4.79E-29 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 GYO_0768 b70e3d9d5ecd10e914e0941622bc321b 237 Gene3D G3DSA:1.10.10.10 136 237 4.6E-32 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily GYO_0768 b70e3d9d5ecd10e914e0941622bc321b 237 SUPERFAMILY SSF52172 3 130 7.12E-39 T 14-10-2018 IPR011006 CheY-like superfamily GYO_0768 b70e3d9d5ecd10e914e0941622bc321b 237 SMART SM00862 160 232 2.1E-26 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 GYO_0768 b70e3d9d5ecd10e914e0941622bc321b 237 Pfam PF00072 Response regulator receiver domain 10 119 1.1E-24 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 GYO_1414 990be89a598df5d673245746e96b9560 65 Pfam PF12758 Protein of unknown function (DUF3813) 1 64 1.8E-29 T 14-10-2018 IPR024217 Protein of unknown function DUF3813 GYO_0180 27911eb90c544f80b9b7f6c4f6a28fe2 237 TIGRFAM TIGR02883 spore_cwlD: N-acetylmuramoyl-L-alanine amidase CwlD 41 228 6.8E-85 T 14-10-2018 IPR014234 N-acetylmuramoyl-L-alanine amidase CwlD MetaCyc: PWY-7883 GYO_0180 27911eb90c544f80b9b7f6c4f6a28fe2 237 SMART SM00646 115 226 1.2E-36 T 14-10-2018 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 GYO_0180 27911eb90c544f80b9b7f6c4f6a28fe2 237 SUPERFAMILY SSF53187 41 230 8.48E-53 T 14-10-2018 GYO_0180 27911eb90c544f80b9b7f6c4f6a28fe2 237 Gene3D G3DSA:3.40.630.40 39 234 7.3E-55 T 14-10-2018 GYO_0180 27911eb90c544f80b9b7f6c4f6a28fe2 237 Pfam PF01520 N-acetylmuramoyl-L-alanine amidase 43 226 1.1E-48 T 14-10-2018 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 GYO_0724 f0e70ed4ca50349175b175eebb59895f 417 SUPERFAMILY SSF103473 19 397 9.68E-48 T 14-10-2018 IPR036259 MFS transporter superfamily GYO_0724 f0e70ed4ca50349175b175eebb59895f 417 Gene3D G3DSA:1.20.1250.20 16 404 6.3E-38 T 14-10-2018 GYO_0724 f0e70ed4ca50349175b175eebb59895f 417 Pfam PF07690 Major Facilitator Superfamily 47 367 1.5E-25 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 GYO_3550 4dbca60a6e97923a2f4be3ea436a20f2 416 Gene3D G3DSA:3.90.1150.10 9 384 1.1E-148 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 GYO_3550 4dbca60a6e97923a2f4be3ea436a20f2 416 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 189 209 - T 14-10-2018 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site GYO_3550 4dbca60a6e97923a2f4be3ea436a20f2 416 PIRSF PIRSF000524 5 413 9.6E-147 T 14-10-2018 IPR024169 Serine-pyruvate aminotransferase/2-aminoethylphosphonate-pyruvate transaminase KEGG: 00440+2.6.1.37|MetaCyc: PWY-6832|Reactome: R-HSA-389661|Reactome: R-HSA-9033241 GYO_3550 4dbca60a6e97923a2f4be3ea436a20f2 416 SUPERFAMILY SSF53383 10 389 7.98E-97 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase GYO_3550 4dbca60a6e97923a2f4be3ea436a20f2 416 Gene3D G3DSA:3.40.640.10 23 286 1.1E-148 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 GYO_3550 4dbca60a6e97923a2f4be3ea436a20f2 416 Pfam PF00266 Aminotransferase class-V 37 355 1.7E-31 T 14-10-2018 IPR000192 Aminotransferase class V domain GYO_1141 096938ba652e67f243b3403d11e00f02 145 Gene3D G3DSA:3.30.1490.190 88 145 9.6E-26 T 14-10-2018 GYO_1141 096938ba652e67f243b3403d11e00f02 145 Gene3D G3DSA:1.10.10.10 1 87 2.8E-34 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily GYO_1141 096938ba652e67f243b3403d11e00f02 145 SUPERFAMILY SSF46785 8 137 2.2E-42 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily GYO_1141 096938ba652e67f243b3403d11e00f02 145 Pfam PF01475 Ferric uptake regulator family 15 133 7.4E-41 T 14-10-2018 IPR002481 Ferric-uptake regulator GO:0003700|GO:0006355 GYO_3488 28a49c17bb5dea1ae9fd57918b008809 311 Gene3D G3DSA:1.10.1200.10 229 301 1.6E-26 T 14-10-2018 IPR036736 ACP-like superfamily GYO_3488 28a49c17bb5dea1ae9fd57918b008809 311 PIRSF PIRSF001111 1 305 3.4E-137 T 14-10-2018 IPR016291 Isochorismatase GO:0008908 GYO_3488 28a49c17bb5dea1ae9fd57918b008809 311 SUPERFAMILY SSF47336 232 300 1.96E-9 T 14-10-2018 IPR036736 ACP-like superfamily GYO_3488 28a49c17bb5dea1ae9fd57918b008809 311 Pfam PF00857 Isochorismatase family 32 203 3.7E-39 T 14-10-2018 IPR000868 Isochorismatase-like GO:0003824 GYO_3488 28a49c17bb5dea1ae9fd57918b008809 311 Pfam PF00550 Phosphopantetheine attachment site 234 293 2.6E-7 T 14-10-2018 IPR009081 Phosphopantetheine binding ACP domain GYO_3488 28a49c17bb5dea1ae9fd57918b008809 311 Gene3D G3DSA:3.40.50.850 1 211 5.2E-75 T 14-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 GYO_3488 28a49c17bb5dea1ae9fd57918b008809 311 SUPERFAMILY SSF52499 1 212 1.05E-64 T 14-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 GYO_3488 28a49c17bb5dea1ae9fd57918b008809 311 PRINTS PR01398 Isochorismatase signature 2 14 9.7E-50 T 14-10-2018 IPR016291 Isochorismatase GO:0008908 GYO_3488 28a49c17bb5dea1ae9fd57918b008809 311 PRINTS PR01398 Isochorismatase signature 80 99 9.7E-50 T 14-10-2018 IPR016291 Isochorismatase GO:0008908 GYO_3488 28a49c17bb5dea1ae9fd57918b008809 311 PRINTS PR01398 Isochorismatase signature 63 80 9.7E-50 T 14-10-2018 IPR016291 Isochorismatase GO:0008908 GYO_3488 28a49c17bb5dea1ae9fd57918b008809 311 PRINTS PR01398 Isochorismatase signature 112 134 9.7E-50 T 14-10-2018 IPR016291 Isochorismatase GO:0008908 GYO_3488 28a49c17bb5dea1ae9fd57918b008809 311 PRINTS PR01398 Isochorismatase signature 168 186 9.7E-50 T 14-10-2018 IPR016291 Isochorismatase GO:0008908 GYO_3488 28a49c17bb5dea1ae9fd57918b008809 311 PRINTS PR01398 Isochorismatase signature 186 203 9.7E-50 T 14-10-2018 IPR016291 Isochorismatase GO:0008908 GYO_1839 305b5fa9e5bd6c50edd64a7dd35b9101 148 Gene3D G3DSA:3.10.580.10 1 125 9.0E-35 T 14-10-2018 GYO_1839 305b5fa9e5bd6c50edd64a7dd35b9101 148 Pfam PF00571 CBS domain 71 119 1.0E-12 T 14-10-2018 IPR000644 CBS domain GYO_1839 305b5fa9e5bd6c50edd64a7dd35b9101 148 Pfam PF00571 CBS domain 4 56 8.7E-13 T 14-10-2018 IPR000644 CBS domain GYO_1839 305b5fa9e5bd6c50edd64a7dd35b9101 148 SMART SM00116 11 60 5.7E-6 T 14-10-2018 IPR000644 CBS domain GYO_1839 305b5fa9e5bd6c50edd64a7dd35b9101 148 SMART SM00116 77 124 1.2E-5 T 14-10-2018 IPR000644 CBS domain GYO_1839 305b5fa9e5bd6c50edd64a7dd35b9101 148 SUPERFAMILY SSF54631 2 119 2.65E-32 T 14-10-2018 GYO_4430 5dd7bfcaac0c8617d052da8050cb0299 1566 SUPERFAMILY SSF52540 196 388 3.72E-14 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase GYO_4430 5dd7bfcaac0c8617d052da8050cb0299 1566 Gene3D G3DSA:3.40.50.300 162 332 7.8E-8 T 14-10-2018 GYO_4379 751785bef7c482ed9db9cda7c4ede924 297 Hamap MF_01672 Inosose dehydratase [iolE]. 1 295 57.197 T 14-10-2018 IPR023952 Inosose dehydratase GO:0019310|GO:0030145|GO:0050114 KEGG: 00562+4.2.1.44 GYO_4379 751785bef7c482ed9db9cda7c4ede924 297 TIGRFAM TIGR04379 myo_inos_iolE: myo-inosose-2 dehydratase 6 292 5.4E-121 T 14-10-2018 IPR030823 IolE/MocC family KEGG: 00562+4.2.1.44 GYO_4379 751785bef7c482ed9db9cda7c4ede924 297 Gene3D G3DSA:3.20.20.150 2 295 7.9E-79 T 14-10-2018 GYO_4379 751785bef7c482ed9db9cda7c4ede924 297 SUPERFAMILY SSF51658 7 291 1.66E-53 T 14-10-2018 IPR036237 Xylose isomerase-like superfamily GYO_4379 751785bef7c482ed9db9cda7c4ede924 297 Pfam PF01261 Xylose isomerase-like TIM barrel 57 231 2.6E-25 T 14-10-2018 IPR013022 Xylose isomerase-like, TIM barrel domain GYO_4106 3aecce2030e6a0e55cd45ec813fc851e 184 Pfam PF02613 Nitrate reductase delta subunit 41 153 2.7E-6 T 14-10-2018 IPR020945 DMSO/Nitrate reductase chaperone GYO_4106 3aecce2030e6a0e55cd45ec813fc851e 184 Gene3D G3DSA:1.20.120.700 13 162 8.6E-12 T 14-10-2018 GYO_4106 3aecce2030e6a0e55cd45ec813fc851e 184 SUPERFAMILY SSF89155 6 170 4.06E-29 T 14-10-2018 IPR036411 TorD-like superfamily GYO_4106 3aecce2030e6a0e55cd45ec813fc851e 184 TIGRFAM TIGR00684 narJ: nitrate reductase molybdenum cofactor assembly chaperone 14 165 1.7E-64 T 14-10-2018 IPR003765 Nitrate reductase chaperone, NarJ GO:0051082|GO:0051131 GYO_4106 3aecce2030e6a0e55cd45ec813fc851e 184 Gene3D G3DSA:1.10.4070.10 72 154 8.6E-12 T 14-10-2018 GYO_4107 eae69151eff763fdda38f71526b04859 487 Gene3D G3DSA:1.10.3650.10 356 434 7.8E-28 T 14-10-2018 IPR038262 Nitrate reductase beta, C-terminal domain superfamily KEGG: 00910+1.7.5.1|MetaCyc: PWY-6748 GYO_4107 eae69151eff763fdda38f71526b04859 487 Pfam PF14711 Respiratory nitrate reductase beta C-terminal 356 436 1.4E-28 T 14-10-2018 IPR029263 Respiratory nitrate reductase beta, C-terminal KEGG: 00910+1.7.5.1|MetaCyc: PWY-6748 GYO_4107 eae69151eff763fdda38f71526b04859 487 Gene3D G3DSA:3.30.70.20 1 321 9.2E-99 T 14-10-2018 GYO_4107 eae69151eff763fdda38f71526b04859 487 Pfam PF13247 4Fe-4S dicluster domain 172 269 5.9E-37 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain GYO_4107 eae69151eff763fdda38f71526b04859 487 TIGRFAM TIGR01660 narH: nitrate reductase, beta subunit 1 484 7.9E-289 T 14-10-2018 IPR006547 Nitrate reductase, beta subunit GO:0008940|GO:0009325|GO:0042126|GO:0055114 KEGG: 00910+1.7.5.1|MetaCyc: PWY-6748 GYO_4107 eae69151eff763fdda38f71526b04859 487 SUPERFAMILY SSF54862 2 485 1.36E-160 T 14-10-2018 GYO_0758 1329c0f31fc9d6a351006c17ff3059ba 207 Pfam PF02525 Flavodoxin-like fold 13 181 3.7E-45 T 14-10-2018 IPR003680 Flavodoxin-like fold GYO_0758 1329c0f31fc9d6a351006c17ff3059ba 207 Gene3D G3DSA:3.40.50.360 13 186 3.1E-54 T 14-10-2018 IPR029039 Flavoprotein-like superfamily GYO_0758 1329c0f31fc9d6a351006c17ff3059ba 207 SUPERFAMILY SSF52218 13 185 9.18E-48 T 14-10-2018 IPR029039 Flavoprotein-like superfamily GYO_2596 4813501e4fe0ccfc312a02eac3ae1016 387 Gene3D G3DSA:3.20.20.140 1 238 4.5E-11 T 14-10-2018 GYO_2596 4813501e4fe0ccfc312a02eac3ae1016 387 SUPERFAMILY SSF47781 310 368 5.08E-7 T 14-10-2018 IPR010994 RuvA domain 2-like GYO_2596 4813501e4fe0ccfc312a02eac3ae1016 387 SUPERFAMILY SSF89550 2 242 1.04E-11 T 14-10-2018 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 GYO_2596 4813501e4fe0ccfc312a02eac3ae1016 387 Pfam PF13263 PHP-associated 196 242 4.0E-5 T 14-10-2018 GYO_2596 4813501e4fe0ccfc312a02eac3ae1016 387 Gene3D G3DSA:1.10.150.20 308 367 2.2E-6 T 14-10-2018 GYO_2596 4813501e4fe0ccfc312a02eac3ae1016 387 TIGRFAM TIGR00375 TIGR00375: TIGR00375 family protein 26 385 5.5E-131 T 14-10-2018 IPR005287 Conserved hypothetical protein CHP00375 GYO_0079 e9697fc6e9195a57b3962935112b5515 338 ProSitePatterns PS00107 Protein kinases ATP-binding region signature. 34 55 - T 14-10-2018 IPR017441 Protein kinase, ATP binding site GO:0005524 GYO_0079 e9697fc6e9195a57b3962935112b5515 338 Gene3D G3DSA:1.10.510.10 111 264 3.0E-23 T 14-10-2018 GYO_0079 e9697fc6e9195a57b3962935112b5515 338 Gene3D G3DSA:3.30.200.20 12 110 3.0E-23 T 14-10-2018 GYO_0079 e9697fc6e9195a57b3962935112b5515 338 SMART SM00220 28 265 3.7E-6 T 14-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 GYO_0079 e9697fc6e9195a57b3962935112b5515 338 Pfam PF00069 Protein kinase domain 28 264 4.3E-14 T 14-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 GYO_0079 e9697fc6e9195a57b3962935112b5515 338 SUPERFAMILY SSF56112 15 235 1.48E-22 T 14-10-2018 IPR011009 Protein kinase-like domain superfamily GYO_0081 193dbb6a16fe152ee4d3431021f5c9e2 179 Gene3D G3DSA:3.40.50.2020 1 179 8.5E-68 T 14-10-2018 GYO_0081 193dbb6a16fe152ee4d3431021f5c9e2 179 TIGRFAM TIGR01203 HGPRTase: hypoxanthine phosphoribosyltransferase 8 173 1.4E-71 T 14-10-2018 IPR005904 Hypoxanthine phosphoribosyl transferase GO:0004422|GO:0005737|GO:0006166 KEGG: 00230+2.4.2.8|KEGG: 00983+2.4.2.8|MetaCyc: PWY-6599|MetaCyc: PWY-6609|MetaCyc: PWY-6610|MetaCyc: PWY-6620 GYO_0081 193dbb6a16fe152ee4d3431021f5c9e2 179 SUPERFAMILY SSF53271 2 178 1.7E-60 T 14-10-2018 IPR029057 Phosphoribosyltransferase-like GYO_0081 193dbb6a16fe152ee4d3431021f5c9e2 179 Pfam PF00156 Phosphoribosyl transferase domain 14 159 4.0E-25 T 14-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 GYO_3261 b72f9440f8656e819231bc9b5b505b09 321 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 111 314 6.4E-15 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 GYO_3261 b72f9440f8656e819231bc9b5b505b09 321 Gene3D G3DSA:1.10.3720.10 73 321 1.5E-59 T 14-10-2018 IPR035906 MetI-like superfamily GYO_3261 b72f9440f8656e819231bc9b5b505b09 321 SUPERFAMILY SSF161098 77 306 1.07E-47 T 14-10-2018 IPR035906 MetI-like superfamily GYO_1066 24d999fd40192bf78f462b6778f8b241 319 Pfam PF01544 CorA-like Mg2+ transporter protein 28 309 4.6E-79 T 14-10-2018 IPR002523 Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB GO:0016020|GO:0030001|GO:0046873|GO:0055085 GYO_1066 24d999fd40192bf78f462b6778f8b241 319 TIGRFAM TIGR00383 corA: magnesium and cobalt transport protein CorA 4 315 9.8E-126 T 14-10-2018 IPR004488 Magnesium/cobalt transport protein CorA GO:0006824|GO:0015087|GO:0015095|GO:0015693|GO:0016020 GYO_1066 24d999fd40192bf78f462b6778f8b241 319 Gene3D G3DSA:3.30.460.20 3 125 4.4E-28 T 14-10-2018 GYO_1066 24d999fd40192bf78f462b6778f8b241 319 Gene3D G3DSA:1.20.58.340 126 237 3.2E-29 T 14-10-2018 GYO_1066 24d999fd40192bf78f462b6778f8b241 319 SUPERFAMILY SSF144083 250 312 1.29E-22 T 14-10-2018 GYO_1066 24d999fd40192bf78f462b6778f8b241 319 SUPERFAMILY SSF143865 19 249 2.09E-63 T 14-10-2018 GYO_1066 24d999fd40192bf78f462b6778f8b241 319 Gene3D G3DSA:1.20.58.340 239 315 4.3E-32 T 14-10-2018 GYO_3174 fa4d30f0b9f1e17a43a4bf3047ac6a68 290 Gene3D G3DSA:3.90.226.10 28 282 1.3E-87 T 14-10-2018 GYO_3174 fa4d30f0b9f1e17a43a4bf3047ac6a68 290 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 200 217 6.0E-38 T 14-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 GYO_3174 fa4d30f0b9f1e17a43a4bf3047ac6a68 290 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 163 181 6.0E-38 T 14-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 GYO_3174 fa4d30f0b9f1e17a43a4bf3047ac6a68 290 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 251 260 6.0E-38 T 14-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 GYO_3174 fa4d30f0b9f1e17a43a4bf3047ac6a68 290 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 129 143 6.0E-38 T 14-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 GYO_3174 fa4d30f0b9f1e17a43a4bf3047ac6a68 290 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 229 240 6.0E-38 T 14-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 GYO_3174 fa4d30f0b9f1e17a43a4bf3047ac6a68 290 Hamap MF_01395 Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta, chloroplastic [accD]. 3 281 38.132 T 14-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 GYO_3174 fa4d30f0b9f1e17a43a4bf3047ac6a68 290 SUPERFAMILY SSF52096 28 281 1.71E-79 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily GYO_3174 fa4d30f0b9f1e17a43a4bf3047ac6a68 290 TIGRFAM TIGR00515 accD: acetyl-CoA carboxylase, carboxyl transferase, beta subunit 15 284 1.4E-140 T 14-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 GYO_3174 fa4d30f0b9f1e17a43a4bf3047ac6a68 290 Pfam PF01039 Carboxyl transferase domain 63 243 1.3E-18 T 14-10-2018 IPR034733 Acetyl-CoA carboxylase MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722|Reactome: R-HSA-196780 GYO_1651 bf13b220b3c3e0bdb5aeda620f3fa6ab 171 Pfam PF03413 Peptidase propeptide and YPEB domain 43 96 1.9E-8 T 14-10-2018 IPR025711 PepSY domain GYO_1651 bf13b220b3c3e0bdb5aeda620f3fa6ab 171 Pfam PF03413 Peptidase propeptide and YPEB domain 110 168 7.1E-12 T 14-10-2018 IPR025711 PepSY domain GYO_1651 bf13b220b3c3e0bdb5aeda620f3fa6ab 171 Gene3D G3DSA:3.10.450.40 102 171 5.4E-17 T 14-10-2018 GYO_1651 bf13b220b3c3e0bdb5aeda620f3fa6ab 171 Gene3D G3DSA:3.10.450.40 34 99 3.4E-12 T 14-10-2018 GYO_1356 d90b46a0d7ce0592271e85073e6a72c7 406 Gene3D G3DSA:1.20.1250.20 6 190 5.1E-17 T 14-10-2018 GYO_1356 d90b46a0d7ce0592271e85073e6a72c7 406 Gene3D G3DSA:1.20.1250.20 204 386 3.3E-25 T 14-10-2018 GYO_1356 d90b46a0d7ce0592271e85073e6a72c7 406 SUPERFAMILY SSF103473 6 386 3.27E-37 T 14-10-2018 IPR036259 MFS transporter superfamily GYO_1356 d90b46a0d7ce0592271e85073e6a72c7 406 Pfam PF07690 Major Facilitator Superfamily 13 348 1.2E-21 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 GYO_1493 acc873ad7f70df22741df660ee08d25b 240 Pfam PF00756 Putative esterase 15 238 1.8E-61 T 14-10-2018 IPR000801 Putative esterase Reactome: R-HSA-156590 GYO_1493 acc873ad7f70df22741df660ee08d25b 240 Gene3D G3DSA:3.40.50.1820 2 240 6.0E-45 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold GYO_1493 acc873ad7f70df22741df660ee08d25b 240 SUPERFAMILY SSF53474 6 237 6.51E-32 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold GYO_3794 5f8777b1f6f04fec8d49e9ddf1c3a66e 435 SUPERFAMILY SSF160964 82 180 6.67E-10 T 14-10-2018 GYO_3794 5f8777b1f6f04fec8d49e9ddf1c3a66e 435 Gene3D G3DSA:1.10.3720.10 171 432 2.9E-60 T 14-10-2018 IPR035906 MetI-like superfamily GYO_3794 5f8777b1f6f04fec8d49e9ddf1c3a66e 435 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 210 422 8.1E-24 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 GYO_3794 5f8777b1f6f04fec8d49e9ddf1c3a66e 435 SUPERFAMILY SSF161098 175 421 9.81E-50 T 14-10-2018 IPR035906 MetI-like superfamily GYO_3384 f4b5f1bee113b516382143bfe8515010 490 TIGRFAM TIGR01804 BADH: betaine-aldehyde dehydrogenase 6 474 5.2E-247 T 14-10-2018 IPR011264 Betaine aldehyde dehydrogenase GO:0008802|GO:0019285|GO:0046872 KEGG: 00260+1.2.1.8|MetaCyc: PWY-3722|MetaCyc: PWY-7494 GYO_3384 f4b5f1bee113b516382143bfe8515010 490 SUPERFAMILY SSF53720 4 481 2.36E-173 T 14-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 GYO_3384 f4b5f1bee113b516382143bfe8515010 490 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 248 255 - T 14-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 GYO_3384 f4b5f1bee113b516382143bfe8515010 490 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 276 287 - T 14-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 GYO_3384 f4b5f1bee113b516382143bfe8515010 490 Gene3D G3DSA:3.40.605.10 10 471 4.9E-194 T 14-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 GYO_3384 f4b5f1bee113b516382143bfe8515010 490 Pfam PF00171 Aldehyde dehydrogenase family 11 476 1.3E-183 T 14-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 GYO_3384 f4b5f1bee113b516382143bfe8515010 490 Gene3D G3DSA:3.40.309.10 253 446 4.9E-194 T 14-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 GYO_2823 e85cb8233f6dd558615ed4beb5905afe 88 Gene3D G3DSA:1.20.58.110 1 87 4.3E-30 T 14-10-2018 IPR036510 Ribosomal protein S20 superfamily GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 GYO_2823 e85cb8233f6dd558615ed4beb5905afe 88 Hamap MF_00500 30S ribosomal protein S20 [rpsT]. 1 85 17.279 T 14-10-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 GYO_2823 e85cb8233f6dd558615ed4beb5905afe 88 ProDom PD004231 RIBOSOMAL S20 30S RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN S20P SUBUNIT CHLOROPLAST DIRECT 14 88 3.0E-34 T 14-10-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 GYO_2823 e85cb8233f6dd558615ed4beb5905afe 88 TIGRFAM TIGR00029 S20: ribosomal protein bS20 1 86 2.4E-34 T 14-10-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 GYO_2823 e85cb8233f6dd558615ed4beb5905afe 88 Pfam PF01649 Ribosomal protein S20 2 84 1.3E-27 T 14-10-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 GYO_2823 e85cb8233f6dd558615ed4beb5905afe 88 SUPERFAMILY SSF46992 3 86 1.31E-28 T 14-10-2018 IPR036510 Ribosomal protein S20 superfamily GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 GYO_1686 1fc47aa3678493bb60294c3c4ccc6339 405 Pfam PF02788 Ribulose bisphosphate carboxylase large chain, N-terminal domain 3 106 5.7E-10 T 14-10-2018 IPR017443 Ribulose bisphosphate carboxylase, large subunit, ferrodoxin-like N-terminal GO:0015977|GO:0016984 KEGG: 00630+4.1.1.39|KEGG: 00710+4.1.1.39|MetaCyc: PWY-5532|MetaCyc: PWY-5723 GYO_1686 1fc47aa3678493bb60294c3c4ccc6339 405 Gene3D G3DSA:3.30.70.150 2 114 1.8E-32 T 14-10-2018 IPR036422 RuBisCO large subunit, N-terminal domain superfamily GO:0015977|GO:0016984 KEGG: 00630+4.1.1.39|KEGG: 00710+4.1.1.39|MetaCyc: PWY-5532|MetaCyc: PWY-5723 GYO_1686 1fc47aa3678493bb60294c3c4ccc6339 405 SUPERFAMILY SSF54966 1 112 3.01E-31 T 14-10-2018 IPR036422 RuBisCO large subunit, N-terminal domain superfamily GO:0015977|GO:0016984 KEGG: 00630+4.1.1.39|KEGG: 00710+4.1.1.39|MetaCyc: PWY-5532|MetaCyc: PWY-5723 GYO_1686 1fc47aa3678493bb60294c3c4ccc6339 405 Gene3D G3DSA:3.20.20.110 115 405 1.8E-104 T 14-10-2018 IPR036376 Ribulose bisphosphate carboxylase, large subunit, C-terminal domain superfamily GO:0000287 KEGG: 00630+4.1.1.39|KEGG: 00710+4.1.1.39|MetaCyc: PWY-5532|MetaCyc: PWY-5723 GYO_1686 1fc47aa3678493bb60294c3c4ccc6339 405 TIGRFAM TIGR03332 salvage_mtnW: 2,3-diketo-5-methylthiopentyl-1-phosphate enolase 2 400 9.9E-238 T 14-10-2018 IPR017717 2,3-diketo-5-methylthiopentyl-1-phosphate enolase GO:0000287|GO:0019509|GO:0043715 KEGG: 00270+5.3.2.5|MetaCyc: PWY-4361 GYO_1686 1fc47aa3678493bb60294c3c4ccc6339 405 Pfam PF00016 Ribulose bisphosphate carboxylase large chain, catalytic domain 320 399 1.2E-16 T 14-10-2018 IPR000685 Ribulose bisphosphate carboxylase, large subunit, C-terminal GO:0000287 KEGG: 00630+4.1.1.39|KEGG: 00710+4.1.1.39|MetaCyc: PWY-5532|MetaCyc: PWY-5723 GYO_1686 1fc47aa3678493bb60294c3c4ccc6339 405 Pfam PF00016 Ribulose bisphosphate carboxylase large chain, catalytic domain 121 289 2.6E-20 T 14-10-2018 IPR000685 Ribulose bisphosphate carboxylase, large subunit, C-terminal GO:0000287 KEGG: 00630+4.1.1.39|KEGG: 00710+4.1.1.39|MetaCyc: PWY-5532|MetaCyc: PWY-5723 GYO_1686 1fc47aa3678493bb60294c3c4ccc6339 405 Hamap MF_01679 2,3-diketo-5-methylthiopentyl-1-phosphate enolase [mtnW]. 2 400 62.206 T 14-10-2018 IPR017717 2,3-diketo-5-methylthiopentyl-1-phosphate enolase GO:0000287|GO:0019509|GO:0043715 KEGG: 00270+5.3.2.5|MetaCyc: PWY-4361 GYO_1686 1fc47aa3678493bb60294c3c4ccc6339 405 SUPERFAMILY SSF51649 115 402 3.14E-81 T 14-10-2018 IPR036376 Ribulose bisphosphate carboxylase, large subunit, C-terminal domain superfamily GO:0000287 KEGG: 00630+4.1.1.39|KEGG: 00710+4.1.1.39|MetaCyc: PWY-5532|MetaCyc: PWY-5723 GYO_3293 896ebd06a297a222e95917f714100a33 231 ProSitePatterns PS00211 ABC transporters family signature. 146 160 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 GYO_3293 896ebd06a297a222e95917f714100a33 231 Pfam PF00005 ABC transporter 25 173 2.1E-36 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 GYO_3293 896ebd06a297a222e95917f714100a33 231 Gene3D G3DSA:3.40.50.300 1 225 2.3E-69 T 14-10-2018 GYO_3293 896ebd06a297a222e95917f714100a33 231 SMART SM00382 34 224 2.9E-17 T 14-10-2018 IPR003593 AAA+ ATPase domain GYO_3293 896ebd06a297a222e95917f714100a33 231 SUPERFAMILY SSF52540 1 223 3.02E-71 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase GYO_3342 4638f7439e845fb7dff62c8a03b8a196 316 Pfam PF01370 NAD dependent epimerase/dehydratase family 3 242 5.3E-56 T 14-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 GYO_3342 4638f7439e845fb7dff62c8a03b8a196 316 SUPERFAMILY SSF51735 1 313 1.01E-86 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily GYO_3342 4638f7439e845fb7dff62c8a03b8a196 316 Gene3D G3DSA:3.90.25.10 177 304 6.1E-94 T 14-10-2018 GYO_3342 4638f7439e845fb7dff62c8a03b8a196 316 Gene3D G3DSA:3.40.50.720 4 296 6.1E-94 T 14-10-2018 GYO_2824 0ecc4afdf2593d119e8b14cadc22be3f 347 SUPERFAMILY SSF48019 217 336 9.18E-26 T 14-10-2018 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: R-HSA-110312|Reactome: R-HSA-110314|Reactome: R-HSA-110320|Reactome: R-HSA-174411|Reactome: R-HSA-5651801|Reactome: R-HSA-5655862|Reactome: R-HSA-5656121|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-69091 GYO_2824 0ecc4afdf2593d119e8b14cadc22be3f 347 Gene3D G3DSA:3.40.50.300 1 143 2.7E-48 T 14-10-2018 GYO_2824 0ecc4afdf2593d119e8b14cadc22be3f 347 Gene3D G3DSA:1.10.8.60 144 213 1.2E-35 T 14-10-2018 GYO_2824 0ecc4afdf2593d119e8b14cadc22be3f 347 SUPERFAMILY SSF52540 5 214 8.9E-28 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase GYO_2824 0ecc4afdf2593d119e8b14cadc22be3f 347 Gene3D G3DSA:1.20.272.10 214 347 6.4E-44 T 14-10-2018 GYO_2824 0ecc4afdf2593d119e8b14cadc22be3f 347 Pfam PF06144 DNA polymerase III, delta subunit 18 193 7.5E-51 T 14-10-2018 IPR010372 DNA polymerase III delta, N-terminal GO:0003677|GO:0003887|GO:0006260|GO:0009360 GYO_2824 0ecc4afdf2593d119e8b14cadc22be3f 347 TIGRFAM TIGR01128 holA: DNA polymerase III, delta subunit 15 336 2.9E-85 T 14-10-2018 IPR005790 DNA polymerase III, delta subunit GO:0003677|GO:0006260 GYO_4495 1d00ae1c03ff4cefc75050eeeb7f28c6 104 Pfam PF12840 Helix-turn-helix domain 6 82 5.6E-11 T 14-10-2018 GYO_4495 1d00ae1c03ff4cefc75050eeeb7f28c6 104 SMART SM00418 5 98 2.5E-10 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 GYO_4495 1d00ae1c03ff4cefc75050eeeb7f28c6 104 SUPERFAMILY SSF46785 3 100 8.62E-21 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily GYO_4495 1d00ae1c03ff4cefc75050eeeb7f28c6 104 Gene3D G3DSA:1.10.10.10 1 104 2.9E-27 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily GYO_2725 54094e3373b70b7c52c3d3273ed14ce2 108 Pfam PF13028 Protein of unknown function (DUF3889) 16 105 4.7E-34 T 14-10-2018 IPR024987 Protein of unknown function DUF3889 GYO_2725 54094e3373b70b7c52c3d3273ed14ce2 108 Gene3D G3DSA:3.10.450.390 22 108 2.1E-39 T 14-10-2018 GYO_4346 873c4e5651d5172fc6c7b51908cc405f 475 ProSitePatterns PS00218 Amino acid permeases signature. 44 75 - T 14-10-2018 IPR004840 Amino acid permease, conserved site GO:0006865|GO:0016021|GO:0055085 GYO_4346 873c4e5651d5172fc6c7b51908cc405f 475 PIRSF PIRSF006060 1 473 9.4E-79 T 14-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 GYO_4346 873c4e5651d5172fc6c7b51908cc405f 475 Gene3D G3DSA:1.20.1740.10 9 473 6.0E-63 T 14-10-2018 GYO_4346 873c4e5651d5172fc6c7b51908cc405f 475 Pfam PF00324 Amino acid permease 19 464 8.2E-133 T 14-10-2018 IPR004841 Amino acid permease/ SLC12A domain GO:0016020|GO:0055085 GYO_2593 a2d4d50d90c620542f9c1d28f5e8a4b5 475 TIGRFAM TIGR00839 aspA: aspartate ammonia-lyase 9 473 4.1E-258 T 14-10-2018 IPR004708 Aspartate ammonia-lyase GO:0006531|GO:0008797 KEGG: 00250+4.3.1.1 GYO_2593 a2d4d50d90c620542f9c1d28f5e8a4b5 475 Gene3D G3DSA:1.20.200.10 143 410 5.2E-115 T 14-10-2018 GYO_2593 a2d4d50d90c620542f9c1d28f5e8a4b5 475 Pfam PF00206 Lyase 16 345 3.1E-118 T 14-10-2018 IPR022761 Fumarate lyase, N-terminal GYO_2593 a2d4d50d90c620542f9c1d28f5e8a4b5 475 Gene3D G3DSA:1.10.40.30 411 462 2.8E-21 T 14-10-2018 GYO_2593 a2d4d50d90c620542f9c1d28f5e8a4b5 475 PRINTS PR00145 Argininosuccinate lyase family signature 178 198 1.5E-6 T 14-10-2018 GYO_2593 a2d4d50d90c620542f9c1d28f5e8a4b5 475 PRINTS PR00145 Argininosuccinate lyase family signature 320 336 1.5E-6 T 14-10-2018 GYO_2593 a2d4d50d90c620542f9c1d28f5e8a4b5 475 Pfam PF10415 Fumarase C C-terminus 412 464 3.5E-19 T 14-10-2018 IPR018951 Fumarase C, C-terminal GO:0006099|GO:0016829 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|Reactome: R-HSA-71403 GYO_2593 a2d4d50d90c620542f9c1d28f5e8a4b5 475 Gene3D G3DSA:1.10.275.10 9 142 1.9E-57 T 14-10-2018 IPR024083 Fumarase/histidase, N-terminal GYO_2593 a2d4d50d90c620542f9c1d28f5e8a4b5 475 SUPERFAMILY SSF48557 8 463 1.32E-148 T 14-10-2018 IPR008948 L-Aspartase-like GO:0003824 GYO_2593 a2d4d50d90c620542f9c1d28f5e8a4b5 475 ProSitePatterns PS00163 Fumarate lyases signature. 320 329 - T 14-10-2018 IPR020557 Fumarate lyase, conserved site GO:0003824 GYO_2593 a2d4d50d90c620542f9c1d28f5e8a4b5 475 PRINTS PR00149 Fumarate lyase superfamily signature 183 201 5.8E-32 T 14-10-2018 IPR000362 Fumarate lyase family GYO_2593 a2d4d50d90c620542f9c1d28f5e8a4b5 475 PRINTS PR00149 Fumarate lyase superfamily signature 274 301 5.8E-32 T 14-10-2018 IPR000362 Fumarate lyase family GYO_2593 a2d4d50d90c620542f9c1d28f5e8a4b5 475 PRINTS PR00149 Fumarate lyase superfamily signature 138 156 5.8E-32 T 14-10-2018 IPR000362 Fumarate lyase family GYO_2593 a2d4d50d90c620542f9c1d28f5e8a4b5 475 PRINTS PR00149 Fumarate lyase superfamily signature 320 336 5.8E-32 T 14-10-2018 IPR000362 Fumarate lyase family GYO_2723 f59af048f358985ce863e6ab56d2d337 190 SUPERFAMILY SSF51306 36 104 1.88E-8 T 14-10-2018 IPR036286 LexA/Signal peptidase-like superfamily GYO_2723 f59af048f358985ce863e6ab56d2d337 190 Pfam PF00717 Peptidase S24-like 43 100 4.1E-9 T 14-10-2018 IPR015927 Peptidase S24/S26A/S26B/S26C GYO_2723 f59af048f358985ce863e6ab56d2d337 190 PRINTS PR00728 Eukaryotic signal peptidase (S26B) family signature 101 112 1.1E-8 T 14-10-2018 IPR001733 Peptidase S26B GO:0006465|GO:0008233|GO:0016020 GYO_2723 f59af048f358985ce863e6ab56d2d337 190 PRINTS PR00728 Eukaryotic signal peptidase (S26B) family signature 43 58 1.1E-8 T 14-10-2018 IPR001733 Peptidase S26B GO:0006465|GO:0008233|GO:0016020 GYO_2723 f59af048f358985ce863e6ab56d2d337 190 TIGRFAM TIGR02228 sigpep_I_arch: signal peptidase I 3 165 9.3E-60 T 14-10-2018 IPR001733 Peptidase S26B GO:0006465|GO:0008233|GO:0016020 GYO_0477 da2ae669e1d1a33ceecf0f087cc1c5ee 386 Pfam PF12679 ABC-2 family transporter protein 5 382 6.0E-32 T 14-10-2018 IPR032688 ABC-2 family transporter protein GO:0055085 GYO_3312 4ef6724f56e566f981011f0cf8ebf6c9 260 SUPERFAMILY SSF52540 4 224 6.66E-60 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase GYO_3312 4ef6724f56e566f981011f0cf8ebf6c9 260 SMART SM00382 32 212 8.2E-18 T 14-10-2018 IPR003593 AAA+ ATPase domain GYO_3312 4ef6724f56e566f981011f0cf8ebf6c9 260 ProSitePatterns PS00211 ABC transporters family signature. 135 149 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 GYO_3312 4ef6724f56e566f981011f0cf8ebf6c9 260 Pfam PF00005 ABC transporter 24 162 9.1E-31 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 GYO_3312 4ef6724f56e566f981011f0cf8ebf6c9 260 Gene3D G3DSA:3.40.50.300 2 229 5.8E-58 T 14-10-2018 GYO_2743 62086bcb17e37bf7a1302237a2496a94 206 SUPERFAMILY SSF56281 5 202 6.42E-51 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like GYO_2743 62086bcb17e37bf7a1302237a2496a94 206 Pfam PF00753 Metallo-beta-lactamase superfamily 4 185 1.6E-35 T 14-10-2018 IPR001279 Metallo-beta-lactamase GYO_2743 62086bcb17e37bf7a1302237a2496a94 206 Gene3D G3DSA:3.60.15.10 1 205 9.2E-62 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like GYO_2743 62086bcb17e37bf7a1302237a2496a94 206 SMART SM00849 7 185 1.9E-42 T 14-10-2018 IPR001279 Metallo-beta-lactamase GYO_0789 50a538c9f0bcb8b7e1f0a452dbccd45e 129 Pfam PF07681 DoxX 5 93 4.4E-20 T 14-10-2018 IPR032808 DoxX family GYO_3219 469ee6e222286bc993006bf5d435f59d 397 PRINTS PR01270 Histone deacetylase superfamily signature 171 186 1.5E-17 T 14-10-2018 IPR000286 Histone deacetylase family Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 GYO_3219 469ee6e222286bc993006bf5d435f59d 397 PRINTS PR01270 Histone deacetylase superfamily signature 138 161 1.5E-17 T 14-10-2018 IPR000286 Histone deacetylase family Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 GYO_3219 469ee6e222286bc993006bf5d435f59d 397 PRINTS PR01270 Histone deacetylase superfamily signature 257 267 1.5E-17 T 14-10-2018 IPR000286 Histone deacetylase family Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 GYO_3219 469ee6e222286bc993006bf5d435f59d 397 PRINTS PR01272 Acetoin utilisation ACUC protein signature 282 298 5.5E-64 T 14-10-2018 IPR003085 Acetoin utilization protein AcuC GO:0045149 GYO_3219 469ee6e222286bc993006bf5d435f59d 397 PRINTS PR01272 Acetoin utilisation ACUC protein signature 115 128 5.5E-64 T 14-10-2018 IPR003085 Acetoin utilization protein AcuC GO:0045149 GYO_3219 469ee6e222286bc993006bf5d435f59d 397 PRINTS PR01272 Acetoin utilisation ACUC protein signature 358 377 5.5E-64 T 14-10-2018 IPR003085 Acetoin utilization protein AcuC GO:0045149 GYO_3219 469ee6e222286bc993006bf5d435f59d 397 PRINTS PR01272 Acetoin utilisation ACUC protein signature 94 108 5.5E-64 T 14-10-2018 IPR003085 Acetoin utilization protein AcuC GO:0045149 GYO_3219 469ee6e222286bc993006bf5d435f59d 397 PRINTS PR01272 Acetoin utilisation ACUC protein signature 321 340 5.5E-64 T 14-10-2018 IPR003085 Acetoin utilization protein AcuC GO:0045149 GYO_3219 469ee6e222286bc993006bf5d435f59d 397 PRINTS PR01272 Acetoin utilisation ACUC protein signature 24 44 5.5E-64 T 14-10-2018 IPR003085 Acetoin utilization protein AcuC GO:0045149 GYO_3219 469ee6e222286bc993006bf5d435f59d 397 PRINTS PR01272 Acetoin utilisation ACUC protein signature 341 357 5.5E-64 T 14-10-2018 IPR003085 Acetoin utilization protein AcuC GO:0045149 GYO_3219 469ee6e222286bc993006bf5d435f59d 397 SUPERFAMILY SSF52768 14 381 2.69E-107 T 14-10-2018 IPR023696 Ureohydrolase domain superfamily GYO_3219 469ee6e222286bc993006bf5d435f59d 397 Gene3D G3DSA:3.40.800.20 10 361 7.5E-101 T 14-10-2018 IPR037138 Histone deacetylase domain superfamily Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 GYO_3219 469ee6e222286bc993006bf5d435f59d 397 Pfam PF00850 Histone deacetylase domain 30 324 3.0E-74 T 14-10-2018 IPR023801 Histone deacetylase domain Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 GYO_2487 e0049de3aa23e697d461ff4d6b38fc1e 428 SUPERFAMILY SSF55205 4 424 1.59E-135 T 14-10-2018 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta GO:0003824 GYO_2487 e0049de3aa23e697d461ff4d6b38fc1e 428 Hamap MF_00210 3-phosphoshikimate 1-carboxyvinyltransferase [aroA]. 7 427 34.623 T 14-10-2018 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866|GO:0009073 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 GYO_2487 e0049de3aa23e697d461ff4d6b38fc1e 428 ProSitePatterns PS00104 EPSP synthase signature 1. 85 99 - T 14-10-2018 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 GYO_2487 e0049de3aa23e697d461ff4d6b38fc1e 428 TIGRFAM TIGR01356 aroA: 3-phosphoshikimate 1-carboxyvinyltransferase 11 426 2.7E-132 T 14-10-2018 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866|GO:0009073 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 GYO_2487 e0049de3aa23e697d461ff4d6b38fc1e 428 ProSitePatterns PS00885 EPSP synthase signature 2. 337 355 - T 14-10-2018 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 GYO_2487 e0049de3aa23e697d461ff4d6b38fc1e 428 Pfam PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) 5 421 2.2E-124 T 14-10-2018 IPR001986 Enolpyruvate transferase domain GO:0016765 GYO_2487 e0049de3aa23e697d461ff4d6b38fc1e 428 PIRSF PIRSF000505 1 428 1.2E-119 T 14-10-2018 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866|GO:0009073 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 GYO_2487 e0049de3aa23e697d461ff4d6b38fc1e 428 Gene3D G3DSA:3.65.10.10 9 421 7.5E-155 T 14-10-2018 IPR036968 Enolpyruvate transferase domain superfamily GO:0016765 GYO_2487 e0049de3aa23e697d461ff4d6b38fc1e 428 Gene3D G3DSA:3.65.10.10 19 227 7.5E-155 T 14-10-2018 IPR036968 Enolpyruvate transferase domain superfamily GO:0016765 GYO_1996 54cd7646e8fccc61183d8e92dbecca0a 296 SUPERFAMILY SSF52540 28 276 7.45E-45 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase GYO_1996 54cd7646e8fccc61183d8e92dbecca0a 296 Gene3D G3DSA:3.40.50.300 29 269 1.9E-53 T 14-10-2018 GYO_1996 54cd7646e8fccc61183d8e92dbecca0a 296 Pfam PF10609 NUBPL iron-transfer P-loop NTPase 30 268 2.3E-19 T 14-10-2018 IPR033756 Flagellum site-determining protein YlxH/ Fe-S cluster assembling factor NBP35 GYO_1996 54cd7646e8fccc61183d8e92dbecca0a 296 PIRSF PIRSF003092 4 296 1.2E-77 T 14-10-2018 IPR025501 ATP binding protein MinD GYO_3274 8ef3cbe70f836ab33de6c7193eb26501 299 Pfam PF05448 Acetyl xylan esterase (AXE1) 46 189 3.0E-8 T 14-10-2018 IPR008391 Acetyl xylan esterase GYO_3274 8ef3cbe70f836ab33de6c7193eb26501 299 SUPERFAMILY SSF53474 22 299 4.47E-36 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold GYO_3274 8ef3cbe70f836ab33de6c7193eb26501 299 ProSitePatterns PS00708 Prolyl endopeptidase family serine active site. 144 174 - T 14-10-2018 IPR002471 Peptidase S9, serine active site GO:0004252|GO:0006508 GYO_3274 8ef3cbe70f836ab33de6c7193eb26501 299 Gene3D G3DSA:3.40.50.1820 2 299 4.3E-66 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold GYO_3761 86ac32fa9dc8fce91cfaae59a62966b0 505 Pfam PF14667 Polysaccharide biosynthesis C-terminal domain 342 482 5.2E-9 T 14-10-2018 IPR029303 Polysaccharide biosynthesis protein, C-terminal domain GYO_3761 86ac32fa9dc8fce91cfaae59a62966b0 505 Pfam PF01943 Polysaccharide biosynthesis protein 6 285 1.8E-8 T 14-10-2018 IPR002797 Polysaccharide biosynthesis protein GO:0016020 GYO_4056 e4552ee4e0acf76a544466da8bb3a1fc 287 SUPERFAMILY SSF52943 2 286 9.03E-94 T 14-10-2018 IPR035968 ATP synthase, F1 complex, gamma subunit superfamily GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 GYO_4056 e4552ee4e0acf76a544466da8bb3a1fc 287 Hamap MF_00815 ATP synthase gamma chain [atpG]. 1 286 36.495 T 14-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 GYO_4056 e4552ee4e0acf76a544466da8bb3a1fc 287 TIGRFAM TIGR01146 ATPsyn_F1gamma: ATP synthase F1, gamma subunit 2 286 1.6E-115 T 14-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 GYO_4056 e4552ee4e0acf76a544466da8bb3a1fc 287 PRINTS PR00126 ATP synthase gamma subunit signature 264 285 9.6E-42 T 14-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 GYO_4056 e4552ee4e0acf76a544466da8bb3a1fc 287 PRINTS PR00126 ATP synthase gamma subunit signature 233 252 9.6E-42 T 14-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 GYO_4056 e4552ee4e0acf76a544466da8bb3a1fc 287 PRINTS PR00126 ATP synthase gamma subunit signature 166 183 9.6E-42 T 14-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 GYO_4056 e4552ee4e0acf76a544466da8bb3a1fc 287 PRINTS PR00126 ATP synthase gamma subunit signature 73 92 9.6E-42 T 14-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 GYO_4056 e4552ee4e0acf76a544466da8bb3a1fc 287 ProSitePatterns PS00153 ATP synthase gamma subunit signature. 272 285 - T 14-10-2018 IPR023632 ATP synthase, F1 complex, gamma subunit conserved site Reactome: R-HSA-163210|Reactome: R-HSA-8949613 GYO_4056 e4552ee4e0acf76a544466da8bb3a1fc 287 Gene3D G3DSA:1.10.287.80 6 282 1.2E-104 T 14-10-2018 GYO_4056 e4552ee4e0acf76a544466da8bb3a1fc 287 Pfam PF00231 ATP synthase 3 286 9.1E-102 T 14-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 GYO_4056 e4552ee4e0acf76a544466da8bb3a1fc 287 Gene3D G3DSA:3.40.1380.10 61 205 1.2E-104 T 14-10-2018 GYO_0392 cc38fbf6cc86dfad154657d457287b2d 256 Pfam PF00069 Protein kinase domain 25 178 1.2E-30 T 14-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 GYO_0392 cc38fbf6cc86dfad154657d457287b2d 256 ProSitePatterns PS00107 Protein kinases ATP-binding region signature. 31 54 - T 14-10-2018 IPR017441 Protein kinase, ATP binding site GO:0005524 GYO_0392 cc38fbf6cc86dfad154657d457287b2d 256 Gene3D G3DSA:3.30.200.20 19 112 7.9E-21 T 14-10-2018 GYO_0392 cc38fbf6cc86dfad154657d457287b2d 256 SUPERFAMILY SSF56112 20 235 1.07E-43 T 14-10-2018 IPR011009 Protein kinase-like domain superfamily GYO_0392 cc38fbf6cc86dfad154657d457287b2d 256 Gene3D G3DSA:1.10.510.10 114 251 1.8E-16 T 14-10-2018 GYO_3882 269ad3b517b3d661fbe7135fe7274e67 143 Pfam PF02623 FliW protein 19 138 2.1E-40 T 14-10-2018 IPR003775 Flagellar assembly factor FliW GO:0044780 GYO_3882 269ad3b517b3d661fbe7135fe7274e67 143 Hamap MF_01185 Flagellar assembly factor FliW [fliW]. 17 141 26.995 T 14-10-2018 IPR003775 Flagellar assembly factor FliW GO:0044780 GYO_3882 269ad3b517b3d661fbe7135fe7274e67 143 SUPERFAMILY SSF141457 1 140 7.85E-52 T 14-10-2018 IPR024046 Flagellar assembly factor FliW domain superfamily GYO_3882 269ad3b517b3d661fbe7135fe7274e67 143 Gene3D G3DSA:2.30.290.10 1 142 9.2E-54 T 14-10-2018 IPR024046 Flagellar assembly factor FliW domain superfamily GYO_2286 b427d72cbd0b6b4d32c0f46d5d857bbd 197 ProSitePatterns PS01236 PdxT/SNO family family signature. 41 51 - T 14-10-2018 IPR021196 PdxT/SNO family, conserved site KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|KEGG: 00750+4.3.3.6|MetaCyc: PWY-6466 GYO_2286 b427d72cbd0b6b4d32c0f46d5d857bbd 197 Gene3D G3DSA:3.40.50.880 1 196 4.6E-70 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like GYO_2286 b427d72cbd0b6b4d32c0f46d5d857bbd 197 Hamap MF_01615 Pyridoxal 5'-phosphate synthase subunit PdxT [pdxT]. 4 185 36.761 T 14-10-2018 IPR002161 Pyridoxal 5'-phosphate synthase subunit PdxT/SNO GO:0004359|GO:0042819|GO:0042823 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|KEGG: 00750+4.3.3.6|MetaCyc: PWY-6466 GYO_2286 b427d72cbd0b6b4d32c0f46d5d857bbd 197 SUPERFAMILY SSF52317 3 188 3.75E-47 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like GYO_2286 b427d72cbd0b6b4d32c0f46d5d857bbd 197 Pfam PF01174 SNO glutamine amidotransferase family 6 187 1.3E-70 T 14-10-2018 IPR002161 Pyridoxal 5'-phosphate synthase subunit PdxT/SNO GO:0004359|GO:0042819|GO:0042823 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|KEGG: 00750+4.3.3.6|MetaCyc: PWY-6466 GYO_2286 b427d72cbd0b6b4d32c0f46d5d857bbd 197 TIGRFAM TIGR03800 PLP_synth_Pdx2: pyridoxal 5'-phosphate synthase, glutaminase subunit Pdx2 4 184 1.0E-73 T 14-10-2018 IPR002161 Pyridoxal 5'-phosphate synthase subunit PdxT/SNO GO:0004359|GO:0042819|GO:0042823 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|KEGG: 00750+4.3.3.6|MetaCyc: PWY-6466 GYO_2286 b427d72cbd0b6b4d32c0f46d5d857bbd 197 PIRSF PIRSF005639 1 190 2.2E-71 T 14-10-2018 IPR002161 Pyridoxal 5'-phosphate synthase subunit PdxT/SNO GO:0004359|GO:0042819|GO:0042823 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|KEGG: 00750+4.3.3.6|MetaCyc: PWY-6466 GYO_0897 2f1e31ada25de42e259e30242ce29b34 440 PIRSF PIRSF005353 1 440 6.8E-173 T 14-10-2018 IPR026033 Purine permease PbuG-like GYO_0897 2f1e31ada25de42e259e30242ce29b34 440 Pfam PF00860 Permease family 16 402 1.3E-46 T 14-10-2018 IPR006043 Xanthine/uracil/vitamin C permease GO:0016020|GO:0022857|GO:0055085 GYO_1702 922b7fc94a434098a530cacf9376b088 146 Pfam PF01242 6-pyruvoyl tetrahydropterin synthase 17 138 2.5E-28 T 14-10-2018 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family Reactome: R-HSA-1474151 GYO_1702 922b7fc94a434098a530cacf9376b088 146 SUPERFAMILY SSF55620 11 139 1.89E-32 T 14-10-2018 GYO_1702 922b7fc94a434098a530cacf9376b088 146 PIRSF PIRSF006113 13 140 4.6E-19 T 14-10-2018 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family Reactome: R-HSA-1474151 GYO_1702 922b7fc94a434098a530cacf9376b088 146 TIGRFAM TIGR03367 queuosine_QueD: queuosine biosynthesis protein QueD 16 110 1.0E-28 T 14-10-2018 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family Reactome: R-HSA-1474151 GYO_1702 922b7fc94a434098a530cacf9376b088 146 Gene3D G3DSA:3.30.479.10 3 140 1.3E-29 T 14-10-2018 IPR038418 6-pyruvoyl tetrahydropterin synthase/QueD superfamily Reactome: R-HSA-1474151 GYO_1702 922b7fc94a434098a530cacf9376b088 146 TIGRFAM TIGR00039 6PTHBS: 6-pyruvoyl tetrahydropterin synthase/QueD family protein 15 141 4.9E-41 T 14-10-2018 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family Reactome: R-HSA-1474151 GYO_0872 a630326d0dcc57b8577878519c0083c9 458 ProSitePatterns PS00872 Sodium:galactoside symporter family signature. 73 98 - T 14-10-2018 IPR018043 Sodium:galactoside symporter, conserved site GO:0005215|GO:0006814|GO:0016020 GYO_0872 a630326d0dcc57b8577878519c0083c9 458 Gene3D G3DSA:1.20.1250.20 24 227 3.7E-16 T 14-10-2018 GYO_0872 a630326d0dcc57b8577878519c0083c9 458 Gene3D G3DSA:1.20.1250.20 235 446 5.2E-12 T 14-10-2018 GYO_0872 a630326d0dcc57b8577878519c0083c9 458 SUPERFAMILY SSF103473 19 445 4.32E-42 T 14-10-2018 IPR036259 MFS transporter superfamily GYO_0872 a630326d0dcc57b8577878519c0083c9 458 Pfam PF13347 MFS/sugar transport protein 24 442 3.2E-95 T 14-10-2018 GYO_0872 a630326d0dcc57b8577878519c0083c9 458 TIGRFAM TIGR00792 gph: sugar (Glycoside-Pentoside-Hexuronide) transporter 22 455 1.5E-154 T 14-10-2018 IPR001927 Sodium:galactoside symporter GO:0005215|GO:0006814|GO:0016020 GYO_0041 3de2501a8261f0ebbcb18d6d8633ad93 275 Pfam PF04468 PSP1 C-terminal conserved region 62 146 1.1E-32 T 14-10-2018 IPR007557 PSP1, C-terminal GYO_2488 a7c005797b34274d7c358a90d826570d 371 Pfam PF01842 ACT domain 301 343 4.0E-9 T 14-10-2018 IPR002912 ACT domain GYO_2488 a7c005797b34274d7c358a90d826570d 371 SUPERFAMILY SSF48179 178 287 2.95E-34 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 GYO_2488 a7c005797b34274d7c358a90d826570d 371 Pfam PF02153 Prephenate dehydrogenase 20 278 5.9E-101 T 14-10-2018 IPR003099 Prephenate dehydrogenase GO:0004665|GO:0006571|GO:0008977|GO:0055114 KEGG: 00400+1.3.1.12|KEGG: 00401+1.3.1.12|MetaCyc: PWY-7303 GYO_2488 a7c005797b34274d7c358a90d826570d 371 Gene3D G3DSA:3.40.50.720 3 183 8.0E-52 T 14-10-2018 GYO_2488 a7c005797b34274d7c358a90d826570d 371 SUPERFAMILY SSF55021 294 358 5.44E-8 T 14-10-2018 GYO_2488 a7c005797b34274d7c358a90d826570d 371 Gene3D G3DSA:1.10.3660.10 185 299 4.8E-36 T 14-10-2018 GYO_2488 a7c005797b34274d7c358a90d826570d 371 SUPERFAMILY SSF51735 8 174 7.73E-43 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily GYO_2488 a7c005797b34274d7c358a90d826570d 371 Gene3D G3DSA:3.30.70.260 300 367 6.8E-7 T 14-10-2018 GYO_3514 bee83aaa13100a6e0af8835b9be68d0c 108 SUPERFAMILY SSF52833 3 105 2.46E-46 T 14-10-2018 IPR036249 Thioredoxin-like superfamily GYO_3514 bee83aaa13100a6e0af8835b9be68d0c 108 Pfam PF07315 Protein of unknown function (DUF1462) 9 100 3.9E-44 T 14-10-2018 IPR009190 Protein of unknown function DUF1462 GYO_3514 bee83aaa13100a6e0af8835b9be68d0c 108 PIRSF PIRSF010603 1 106 2.5E-53 T 14-10-2018 IPR009190 Protein of unknown function DUF1462 GYO_3514 bee83aaa13100a6e0af8835b9be68d0c 108 Gene3D G3DSA:3.40.30.30 2 106 6.5E-43 T 14-10-2018 IPR038218 YuzD-like superfamily GYO_0510 03cede6e2a3ef625f1f78171e9394ecd 541 Pfam PF02652 L-lactate permease 14 535 1.7E-214 T 14-10-2018 IPR003804 L-lactate permease GO:0005887|GO:0015129|GO:0015727 GYO_0510 03cede6e2a3ef625f1f78171e9394ecd 541 TIGRFAM TIGR00795 lctP: transporter, lactate permease (LctP) family 4 537 2.7E-212 T 14-10-2018 IPR003804 L-lactate permease GO:0005887|GO:0015129|GO:0015727 GYO_1907 ad690bcac8101bd5a4e65ea95a69946b 354 Pfam PF01384 Phosphate transporter family 16 305 5.4E-46 T 14-10-2018 IPR001204 Phosphate transporter GO:0005315|GO:0006817|GO:0016020 Reactome: R-HSA-427652 GYO_4069 8b234c21e285a43f35de6e021e1d9b8d 150 SMART SM00226 1 144 1.1E-53 T 14-10-2018 IPR023485 Phosphotyrosine protein phosphatase I GYO_4069 8b234c21e285a43f35de6e021e1d9b8d 150 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 3 20 1.6E-8 T 14-10-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 GYO_4069 8b234c21e285a43f35de6e021e1d9b8d 150 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 76 91 1.6E-8 T 14-10-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 GYO_4069 8b234c21e285a43f35de6e021e1d9b8d 150 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 116 131 1.6E-8 T 14-10-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 GYO_4069 8b234c21e285a43f35de6e021e1d9b8d 150 Gene3D G3DSA:3.40.50.2300 1 150 1.0E-61 T 14-10-2018 GYO_4069 8b234c21e285a43f35de6e021e1d9b8d 150 SUPERFAMILY SSF52788 1 145 5.49E-40 T 14-10-2018 IPR036196 Phosphotyrosine protein phosphatase I superfamily GYO_4069 8b234c21e285a43f35de6e021e1d9b8d 150 Pfam PF01451 Low molecular weight phosphotyrosine protein phosphatase 3 141 4.8E-43 T 14-10-2018 IPR023485 Phosphotyrosine protein phosphatase I GYO_1745 fd67a0e8cd06516ad8c135357f2cc9b9 79 SUPERFAMILY SSF143567 2 79 8.11E-29 T 14-10-2018 IPR038073 YkuJ-like superfamily GYO_1745 fd67a0e8cd06516ad8c135357f2cc9b9 79 PIRSF PIRSF037356 1 79 4.6E-35 T 14-10-2018 IPR014904 Protein of unknown function DUF1797 GYO_1745 fd67a0e8cd06516ad8c135357f2cc9b9 79 Gene3D G3DSA:3.30.720.20 1 79 1.7E-37 T 14-10-2018 IPR038073 YkuJ-like superfamily GYO_1745 fd67a0e8cd06516ad8c135357f2cc9b9 79 Pfam PF08796 Protein of unknown function (DUF1797) 7 78 1.7E-25 T 14-10-2018 IPR014904 Protein of unknown function DUF1797 GYO_1108 7dc97c0af863fb14d5764f11e4c53bf8 188 Gene3D G3DSA:1.20.120.450 2 176 1.8E-56 T 14-10-2018 IPR034660 DinB/YfiT-like putative metalloenzymes GYO_1108 7dc97c0af863fb14d5764f11e4c53bf8 188 Pfam PF12867 DinB superfamily 30 168 1.6E-20 T 14-10-2018 IPR024775 DinB-like domain GYO_1108 7dc97c0af863fb14d5764f11e4c53bf8 188 Hamap MF_01256 Putative metal-dependent hydrolase . 4 178 39.396 T 14-10-2018 IPR023774 Putative metal-dependent hydrolase YfiT GYO_1108 7dc97c0af863fb14d5764f11e4c53bf8 188 SUPERFAMILY SSF109854 6 176 5.8E-55 T 14-10-2018 IPR034660 DinB/YfiT-like putative metalloenzymes GYO_2922 c0f7db2fd1e25034e49d765aabb4c4d0 87 SUPERFAMILY SSF46689 1 85 4.84E-14 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 GYO_0833 1758a7a8bb51ca89731edaa38d6ef5b1 202 Gene3D G3DSA:3.10.620.30 2 155 8.1E-16 T 14-10-2018 GYO_0833 1758a7a8bb51ca89731edaa38d6ef5b1 202 SUPERFAMILY SSF54001 24 142 2.8E-20 T 14-10-2018 IPR038765 Papain-like cysteine peptidase superfamily GYO_0833 1758a7a8bb51ca89731edaa38d6ef5b1 202 Pfam PF01841 Transglutaminase-like superfamily 30 138 2.8E-12 T 14-10-2018 IPR002931 Transglutaminase-like GYO_2401 daaeaeae8dee9ab35f3fbea6884943ed 224 Gene3D G3DSA:1.10.8.60 55 125 3.2E-14 T 14-10-2018 GYO_2401 daaeaeae8dee9ab35f3fbea6884943ed 224 Gene3D G3DSA:3.40.50.300 1 54 2.5E-8 T 14-10-2018 GYO_2401 daaeaeae8dee9ab35f3fbea6884943ed 224 Pfam PF08461 Ribonuclease R winged-helix domain 153 216 2.1E-6 T 14-10-2018 IPR013668 Ribonuclease R winged-helix domain GYO_2401 daaeaeae8dee9ab35f3fbea6884943ed 224 SUPERFAMILY SSF52540 1 123 2.92E-19 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase GYO_2401 daaeaeae8dee9ab35f3fbea6884943ed 224 Gene3D G3DSA:1.10.10.10 139 224 1.3E-8 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily GYO_1622 1c7e6c7b7d200e972a57fede688b4914 186 Gene3D G3DSA:3.10.129.10 13 182 1.7E-57 T 14-10-2018 GYO_1622 1c7e6c7b7d200e972a57fede688b4914 186 SUPERFAMILY SSF54637 19 171 1.96E-47 T 14-10-2018 IPR029069 HotDog domain superfamily GYO_1622 1c7e6c7b7d200e972a57fede688b4914 186 Pfam PF03061 Thioesterase superfamily 42 114 1.7E-16 T 14-10-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 GYO_1644 09d7758cdbe4a830fdd99682944848f4 254 Pfam PF02361 Cobalt transport protein 2 222 7.1E-54 T 14-10-2018 IPR003339 ABC/ECF transporter, transmembrane component GYO_0990 1940869e400b7c107660384c2e3b449f 322 Pfam PF16363 GDP-mannose 4,6 dehydratase 10 312 9.0E-59 T 14-10-2018 IPR016040 NAD(P)-binding domain GYO_0990 1940869e400b7c107660384c2e3b449f 322 SUPERFAMILY SSF51735 3 320 2.6E-86 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily GYO_0990 1940869e400b7c107660384c2e3b449f 322 Gene3D G3DSA:3.40.50.720 2 182 7.0E-51 T 14-10-2018 GYO_0990 1940869e400b7c107660384c2e3b449f 322 Gene3D G3DSA:3.90.25.10 183 322 5.8E-40 T 14-10-2018 GYO_0475 f3755f5a88fdd1dfbbe4a6d9cc63c63f 233 SMART SM00850 135 233 3.7E-19 T 14-10-2018 IPR007492 LytTR DNA-binding domain GO:0003677 GYO_0475 f3755f5a88fdd1dfbbe4a6d9cc63c63f 233 Gene3D G3DSA:3.40.50.2300 1 126 1.7E-27 T 14-10-2018 GYO_0475 f3755f5a88fdd1dfbbe4a6d9cc63c63f 233 SUPERFAMILY SSF52172 2 122 1.1E-26 T 14-10-2018 IPR011006 CheY-like superfamily GYO_0475 f3755f5a88fdd1dfbbe4a6d9cc63c63f 233 Pfam PF04397 LytTr DNA-binding domain 136 229 5.4E-20 T 14-10-2018 IPR007492 LytTR DNA-binding domain GO:0003677 GYO_0475 f3755f5a88fdd1dfbbe4a6d9cc63c63f 233 Gene3D G3DSA:2.40.50.40 127 195 1.9E-14 T 14-10-2018 GYO_0475 f3755f5a88fdd1dfbbe4a6d9cc63c63f 233 SMART SM00448 2 113 3.8E-20 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 GYO_0475 f3755f5a88fdd1dfbbe4a6d9cc63c63f 233 Pfam PF00072 Response regulator receiver domain 6 111 1.2E-21 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 GYO_0790 d495c0e4db650a2c2b7cda5e536d5588 112 Gene3D G3DSA:3.40.30.10 4 107 1.1E-21 T 14-10-2018 GYO_0790 d495c0e4db650a2c2b7cda5e536d5588 112 Pfam PF00085 Thioredoxin 14 86 5.2E-7 T 14-10-2018 IPR013766 Thioredoxin domain GO:0045454 GYO_0790 d495c0e4db650a2c2b7cda5e536d5588 112 SUPERFAMILY SSF52833 3 104 3.17E-20 T 14-10-2018 IPR036249 Thioredoxin-like superfamily GYO_3793 143fe9af9680760726a6f0d67fb52a6e 278 SUPERFAMILY SSF161098 9 278 3.18E-61 T 14-10-2018 IPR035906 MetI-like superfamily GYO_3793 143fe9af9680760726a6f0d67fb52a6e 278 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 97 271 3.2E-21 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 GYO_3793 143fe9af9680760726a6f0d67fb52a6e 278 Gene3D G3DSA:1.10.3720.10 3 265 1.8E-54 T 14-10-2018 IPR035906 MetI-like superfamily GYO_2441 dc94380379a7844f31a4555467bf4062 641 Pfam PF13307 Helicase C-terminal domain 484 617 3.6E-25 T 14-10-2018 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 GYO_2441 dc94380379a7844f31a4555467bf4062 641 SMART SM00491 492 620 4.0E-8 T 14-10-2018 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 GYO_2441 dc94380379a7844f31a4555467bf4062 641 SUPERFAMILY SSF52540 52 617 2.19E-17 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase GYO_2441 dc94380379a7844f31a4555467bf4062 641 Gene3D G3DSA:3.40.50.300 458 619 5.4E-27 T 14-10-2018 GYO_2441 dc94380379a7844f31a4555467bf4062 641 Gene3D G3DSA:3.40.50.300 37 318 1.3E-29 T 14-10-2018 GYO_3660 4bc2afa3224ca8eb2eae3303b899a686 138 Gene3D G3DSA:1.20.1550.10 1 111 1.2E-9 T 14-10-2018 IPR023380 DsbB-like superfamily GYO_3660 4bc2afa3224ca8eb2eae3303b899a686 138 PIRSF PIRSF036659 1 138 2.9E-61 T 14-10-2018 IPR012187 Disulphide bond formation protein BdbC GYO_3660 4bc2afa3224ca8eb2eae3303b899a686 138 Hamap MF_00287 Probable disulfide formation protein [bdbC]. 1 136 25.0 T 14-10-2018 IPR012187 Disulphide bond formation protein BdbC GYO_3660 4bc2afa3224ca8eb2eae3303b899a686 138 SUPERFAMILY SSF158442 8 131 1.96E-30 T 14-10-2018 IPR023380 DsbB-like superfamily GYO_3660 4bc2afa3224ca8eb2eae3303b899a686 138 Pfam PF02600 Disulfide bond formation protein DsbB 12 130 3.2E-8 T 14-10-2018 IPR003752 Disulphide bond formation protein DsbB/BdbC GO:0015035|GO:0016020 GYO_3594 067717aa6c4159a655acd81322be0498 246 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 145 173 - T 14-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 GYO_3594 067717aa6c4159a655acd81322be0498 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 158 177 1.4E-35 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR GYO_3594 067717aa6c4159a655acd81322be0498 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 178 195 1.4E-35 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR GYO_3594 067717aa6c4159a655acd81322be0498 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 210 230 1.4E-35 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR GYO_3594 067717aa6c4159a655acd81322be0498 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 1.4E-35 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR GYO_3594 067717aa6c4159a655acd81322be0498 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 82 93 1.4E-35 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR GYO_3594 067717aa6c4159a655acd81322be0498 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 132 148 1.4E-35 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR GYO_3594 067717aa6c4159a655acd81322be0498 246 Gene3D G3DSA:3.40.50.720 2 246 6.0E-75 T 14-10-2018 GYO_3594 067717aa6c4159a655acd81322be0498 246 SUPERFAMILY SSF51735 5 246 9.64E-71 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily GYO_3594 067717aa6c4159a655acd81322be0498 246 Pfam PF00106 short chain dehydrogenase 6 201 3.1E-56 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR GYO_3594 067717aa6c4159a655acd81322be0498 246 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 82 93 7.6E-13 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR GYO_3594 067717aa6c4159a655acd81322be0498 246 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 138 146 7.6E-13 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR GYO_3594 067717aa6c4159a655acd81322be0498 246 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 158 177 7.6E-13 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR GYO_3194 3cb0e493384f5e42a92920f6e67bc039 167 ProSitePatterns PS01265 Tpx family signature. 83 94 - T 14-10-2018 IPR018219 Thiol peroxidase conserved site GO:0016684|GO:0055114 KEGG: 00480+1.11.1.15 GYO_3194 3cb0e493384f5e42a92920f6e67bc039 167 Hamap MF_00269 Thiol peroxidase [tpx]. 3 163 38.287 T 14-10-2018 IPR002065 Thiol peroxidase Tpx GO:0008379|GO:0016209|GO:0055114 KEGG: 00480+1.11.1.15 GYO_3194 3cb0e493384f5e42a92920f6e67bc039 167 Gene3D G3DSA:3.40.30.10 1 165 1.2E-48 T 14-10-2018 GYO_3194 3cb0e493384f5e42a92920f6e67bc039 167 Pfam PF08534 Redoxin 19 156 7.0E-22 T 14-10-2018 IPR013740 Redoxin GO:0016491 Reactome: R-HSA-3299685|Reactome: R-HSA-5628897 GYO_3194 3cb0e493384f5e42a92920f6e67bc039 167 SUPERFAMILY SSF52833 1 160 1.64E-44 T 14-10-2018 IPR036249 Thioredoxin-like superfamily GYO_2321 302cdb8a057f435df3bb7a07c63e96ca 199 Pfam PF00072 Response regulator receiver domain 4 113 1.1E-24 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 GYO_2321 302cdb8a057f435df3bb7a07c63e96ca 199 SMART SM00448 2 113 1.6E-27 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 GYO_2321 302cdb8a057f435df3bb7a07c63e96ca 199 SUPERFAMILY SSF46894 120 198 5.1E-20 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 GYO_2321 302cdb8a057f435df3bb7a07c63e96ca 199 SMART SM00421 135 192 3.1E-22 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 GYO_2321 302cdb8a057f435df3bb7a07c63e96ca 199 Pfam PF00196 Bacterial regulatory proteins, luxR family 137 190 2.7E-19 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 GYO_2321 302cdb8a057f435df3bb7a07c63e96ca 199 Gene3D G3DSA:3.40.50.2300 1 133 1.3E-36 T 14-10-2018 GYO_2321 302cdb8a057f435df3bb7a07c63e96ca 199 SUPERFAMILY SSF52172 1 129 2.28E-28 T 14-10-2018 IPR011006 CheY-like superfamily GYO_2321 302cdb8a057f435df3bb7a07c63e96ca 199 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 152 168 6.1E-13 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 GYO_2321 302cdb8a057f435df3bb7a07c63e96ca 199 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 168 180 6.1E-13 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 GYO_2321 302cdb8a057f435df3bb7a07c63e96ca 199 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 138 152 6.1E-13 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 GYO_2321 302cdb8a057f435df3bb7a07c63e96ca 199 Gene3D G3DSA:1.10.10.10 134 198 8.1E-21 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily GYO_2645 9ffd14379a3976a9c6104d629c6f8013 294 SMART SM00046 5 132 5.3E-34 T 14-10-2018 IPR001206 Diacylglycerol kinase, catalytic domain GO:0016301 GYO_2645 9ffd14379a3976a9c6104d629c6f8013 294 SUPERFAMILY SSF111331 3 294 2.13E-73 T 14-10-2018 IPR016064 NAD kinase/diacylglycerol kinase-like domain superfamily GYO_2645 9ffd14379a3976a9c6104d629c6f8013 294 Pfam PF00781 Diacylglycerol kinase catalytic domain 5 128 4.8E-32 T 14-10-2018 IPR001206 Diacylglycerol kinase, catalytic domain GO:0016301 GYO_2645 9ffd14379a3976a9c6104d629c6f8013 294 Gene3D G3DSA:2.60.200.40 126 279 1.5E-81 T 14-10-2018 GYO_2645 9ffd14379a3976a9c6104d629c6f8013 294 Gene3D G3DSA:3.40.50.10330 7 125 1.5E-81 T 14-10-2018 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, N-terminal GO:0003951 GYO_2645 9ffd14379a3976a9c6104d629c6f8013 294 TIGRFAM TIGR00147 TIGR00147: lipid kinase, YegS/Rv2252/BmrU family 3 294 2.6E-125 T 14-10-2018 IPR005218 Diacylglycerol/lipid kinase GYO_2777 472e67dd4754d8990628cf2ef904de7f 283 SUPERFAMILY SSF51658 3 281 1.03E-98 T 14-10-2018 IPR036237 Xylose isomerase-like superfamily GYO_2777 472e67dd4754d8990628cf2ef904de7f 283 ProSitePatterns PS00731 AP endonucleases family 2 signature 3. 199 215 - T 14-10-2018 IPR018246 AP endonuclease 2, zinc binding site GO:0008270 GYO_2777 472e67dd4754d8990628cf2ef904de7f 283 Hamap MF_00152 Probable endonuclease 4 [nfo]. 1 271 39.214 T 14-10-2018 IPR001719 AP endonuclease 2 GO:0003677|GO:0006281|GO:0008270 GYO_2777 472e67dd4754d8990628cf2ef904de7f 283 TIGRFAM TIGR00587 nfo: apurinic endonuclease (APN1) 2 268 3.5E-103 T 14-10-2018 IPR001719 AP endonuclease 2 GO:0003677|GO:0006281|GO:0008270 GYO_2777 472e67dd4754d8990628cf2ef904de7f 283 Gene3D G3DSA:3.20.20.150 1 283 2.1E-97 T 14-10-2018 GYO_2777 472e67dd4754d8990628cf2ef904de7f 283 Pfam PF01261 Xylose isomerase-like TIM barrel 8 223 3.1E-40 T 14-10-2018 IPR013022 Xylose isomerase-like, TIM barrel domain GYO_2777 472e67dd4754d8990628cf2ef904de7f 283 SMART SM00518 2 271 4.4E-124 T 14-10-2018 IPR001719 AP endonuclease 2 GO:0003677|GO:0006281|GO:0008270 GYO_2777 472e67dd4754d8990628cf2ef904de7f 283 ProSitePatterns PS00730 AP endonucleases family 2 signature 2. 161 168 - T 14-10-2018 IPR018246 AP endonuclease 2, zinc binding site GO:0008270 GYO_2777 472e67dd4754d8990628cf2ef904de7f 283 ProSitePatterns PS00729 AP endonucleases family 2 signature 1. 55 63 - T 14-10-2018 IPR018246 AP endonuclease 2, zinc binding site GO:0008270 GYO_2051 0e828cba4cb790a93981f24879b5cea7 264 Gene3D G3DSA:3.60.21.10 1 264 1.3E-120 T 14-10-2018 IPR029052 Metallo-dependent phosphatase-like GYO_2051 0e828cba4cb790a93981f24879b5cea7 264 SUPERFAMILY SSF56300 1 256 3.8E-94 T 14-10-2018 GYO_2051 0e828cba4cb790a93981f24879b5cea7 264 PIRSF PIRSF004789 1 263 2.4E-111 T 14-10-2018 IPR005235 Metallophosphoesterase, YmdB-like GYO_2051 0e828cba4cb790a93981f24879b5cea7 264 TIGRFAM TIGR00282 TIGR00282: metallophosphoesterase, MG_246/BB_0505 family 1 264 3.8E-134 T 14-10-2018 IPR005235 Metallophosphoesterase, YmdB-like GYO_2051 0e828cba4cb790a93981f24879b5cea7 264 Pfam PF13277 YmdB-like protein 4 254 2.8E-114 T 14-10-2018 IPR005235 Metallophosphoesterase, YmdB-like GYO_1709 9999b0ba3e65745ba77b342ea9c6d698 96 Pfam PF11514 Protein of unknown function (DUF3219) 3 95 1.4E-44 T 14-10-2018 IPR021596 Protein of unknown function DUF3219 GYO_1709 9999b0ba3e65745ba77b342ea9c6d698 96 SUPERFAMILY SSF159173 1 95 4.32E-42 T 14-10-2018 IPR023105 YkvR-like superfamily GYO_1709 9999b0ba3e65745ba77b342ea9c6d698 96 Gene3D G3DSA:2.40.30.80 1 90 2.4E-36 T 14-10-2018 IPR023105 YkvR-like superfamily GYO_1208 2e0bde69a997e18a7c4efc23f58951f3 302 TIGRFAM TIGR00005 rluA_subfam: pseudouridine synthase, RluA family 14 300 7.0E-99 T 14-10-2018 IPR006225 Pseudouridine synthase, RluC/RluD GO:0001522|GO:0003723|GO:0009451|GO:0009982 GYO_1208 2e0bde69a997e18a7c4efc23f58951f3 302 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 134 148 - T 14-10-2018 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 GYO_1208 2e0bde69a997e18a7c4efc23f58951f3 302 Pfam PF00849 RNA pseudouridylate synthase 91 244 6.8E-36 T 14-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 GYO_1208 2e0bde69a997e18a7c4efc23f58951f3 302 SUPERFAMILY SSF55120 76 298 1.67E-69 T 14-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 GYO_1208 2e0bde69a997e18a7c4efc23f58951f3 302 Gene3D G3DSA:3.10.290.10 7 74 1.3E-5 T 14-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 GYO_1208 2e0bde69a997e18a7c4efc23f58951f3 302 SMART SM00363 19 82 2.2E-11 T 14-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 GYO_1208 2e0bde69a997e18a7c4efc23f58951f3 302 SUPERFAMILY SSF55174 24 69 5.42E-5 T 14-10-2018 GYO_1208 2e0bde69a997e18a7c4efc23f58951f3 302 Gene3D G3DSA:3.30.2350.10 84 300 3.2E-71 T 14-10-2018 GYO_3379 94b9b67011411535db8c0c2732354c92 509 Pfam PF15975 Flotillin 368 463 8.3E-15 T 14-10-2018 IPR031905 Flotillin, C-terminal domain Reactome: R-HSA-8849932 GYO_3379 94b9b67011411535db8c0c2732354c92 509 SUPERFAMILY SSF117892 68 210 1.44E-34 T 14-10-2018 IPR036013 Band 7/SPFH domain superfamily GYO_3379 94b9b67011411535db8c0c2732354c92 509 SMART SM00244 119 301 1.4E-14 T 14-10-2018 IPR001107 Band 7 domain GYO_3379 94b9b67011411535db8c0c2732354c92 509 Gene3D G3DSA:3.30.479.30 77 193 3.6E-38 T 14-10-2018 GYO_3379 94b9b67011411535db8c0c2732354c92 509 Pfam PF01145 SPFH domain / Band 7 family 30 219 4.4E-25 T 14-10-2018 IPR001107 Band 7 domain GYO_3409 d663073a32c08b651616b8fce64922e4 662 Gene3D G3DSA:3.30.450.20 72 184 1.6E-39 T 14-10-2018 GYO_3409 d663073a32c08b651616b8fce64922e4 662 Pfam PF00672 HAMP domain 304 352 3.8E-14 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 GYO_3409 d663073a32c08b651616b8fce64922e4 662 Gene3D G3DSA:1.10.8.500 303 354 4.9E-9 T 14-10-2018 GYO_3409 d663073a32c08b651616b8fce64922e4 662 SMART SM00283 385 660 1.8E-93 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 GYO_3409 d663073a32c08b651616b8fce64922e4 662 SUPERFAMILY SSF58104 324 660 1.57E-71 T 14-10-2018 GYO_3409 d663073a32c08b651616b8fce64922e4 662 Gene3D G3DSA:1.10.287.950 355 660 4.5E-69 T 14-10-2018 GYO_3409 d663073a32c08b651616b8fce64922e4 662 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 431 613 2.0E-54 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 GYO_3409 d663073a32c08b651616b8fce64922e4 662 SUPERFAMILY SSF103190 91 195 6.04E-15 T 14-10-2018 IPR029151 Periplasmic sensor-like domain superfamily GYO_3409 d663073a32c08b651616b8fce64922e4 662 SMART SM00319 33 152 2.8E-42 T 14-10-2018 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding GO:0006935|GO:0007165 GYO_3409 d663073a32c08b651616b8fce64922e4 662 Gene3D G3DSA:3.30.450.20 61 268 1.6E-39 T 14-10-2018 GYO_3409 d663073a32c08b651616b8fce64922e4 662 Pfam PF02743 Cache domain 52 266 2.9E-30 T 14-10-2018 IPR033479 Double Cache domain 1 GYO_3409 d663073a32c08b651616b8fce64922e4 662 SMART SM00304 304 356 1.0E-15 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 GYO_3548 e346dd0ff3b617926a2c846fc62591e4 200 Gene3D G3DSA:3.90.550.10 1 197 1.9E-36 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases GYO_3548 e346dd0ff3b617926a2c846fc62591e4 200 SUPERFAMILY SSF53448 1 198 2.32E-18 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases GYO_3548 e346dd0ff3b617926a2c846fc62591e4 200 TIGRFAM TIGR03202 pucB: xanthine dehydrogenase accessory protein pucB 1 192 1.5E-80 T 14-10-2018 IPR017615 Xanthine dehydrogenase, accessory protein PucB GYO_3548 e346dd0ff3b617926a2c846fc62591e4 200 Pfam PF12804 MobA-like NTP transferase domain 3 166 3.0E-25 T 14-10-2018 IPR025877 MobA-like NTP transferase GYO_3934 f0830b65b2ea9a83c08758d04f594644 341 Gene3D G3DSA:3.40.50.720 161 279 5.5E-39 T 14-10-2018 GYO_3934 f0830b65b2ea9a83c08758d04f594644 341 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 26 130 2.3E-8 T 14-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 GYO_3934 f0830b65b2ea9a83c08758d04f594644 341 SUPERFAMILY SSF50129 18 173 2.28E-21 T 14-10-2018 IPR011032 GroES-like superfamily GYO_3934 f0830b65b2ea9a83c08758d04f594644 341 Gene3D G3DSA:3.90.180.10 23 319 5.5E-39 T 14-10-2018 GYO_3934 f0830b65b2ea9a83c08758d04f594644 341 Hamap MF_02069 Ribulose-5-phosphate reductase [tarJ]. 1 341 61.492 T 14-10-2018 IPR034710 Ribulose-5-phosphate reductase GO:0050256 KEGG: 00040+1.1.1.405|MetaCyc: PWY-7815|MetaCyc: PWY-7816|MetaCyc: PWY-7818 GYO_3934 f0830b65b2ea9a83c08758d04f594644 341 Pfam PF16912 Glucose dehydrogenase C-terminus 140 329 2.2E-11 T 14-10-2018 IPR031640 Glucose dehydrogenase, C-terminal KEGG: 00030+1.1.1.47 GYO_3934 f0830b65b2ea9a83c08758d04f594644 341 SUPERFAMILY SSF51735 139 297 7.18E-13 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily GYO_0984 3ed5d55cfe4a83798e985626ca2bbe55 262 Pfam PF14338 Mrr N-terminal domain 1 77 9.5E-12 T 14-10-2018 IPR025745 Restriction system protein Mrr-like N-terminal domain GYO_0984 3ed5d55cfe4a83798e985626ca2bbe55 262 SUPERFAMILY SSF52980 125 241 5.9E-21 T 14-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 GYO_0984 3ed5d55cfe4a83798e985626ca2bbe55 262 Pfam PF04471 Restriction endonuclease 121 236 2.7E-37 T 14-10-2018 IPR007560 Restriction endonuclease type IV, Mrr GO:0003677|GO:0004519|GO:0009307 GYO_0984 3ed5d55cfe4a83798e985626ca2bbe55 262 Gene3D G3DSA:3.40.91.100 84 258 2.0E-9 T 14-10-2018 GYO_3595 d1e0e4331e06318efdaf9d3a3d1214d1 295 SUPERFAMILY SSF53850 87 281 3.72E-36 T 14-10-2018 GYO_3595 d1e0e4331e06318efdaf9d3a3d1214d1 295 Pfam PF03466 LysR substrate binding domain 87 281 8.8E-42 T 14-10-2018 IPR005119 LysR, substrate-binding GYO_3595 d1e0e4331e06318efdaf9d3a3d1214d1 295 Gene3D G3DSA:3.40.190.290 90 292 5.6E-34 T 14-10-2018 GYO_3595 d1e0e4331e06318efdaf9d3a3d1214d1 295 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 61 1.1E-17 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 GYO_3595 d1e0e4331e06318efdaf9d3a3d1214d1 295 SUPERFAMILY SSF46785 2 110 3.48E-22 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily GYO_3595 d1e0e4331e06318efdaf9d3a3d1214d1 295 Gene3D G3DSA:1.10.10.10 1 87 1.2E-21 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily GYO_3209 18e7a4a3ebe8f5869d63682b8f76a80d 207 Pfam PF00440 Bacterial regulatory proteins, tetR family 9 54 9.4E-15 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 GYO_3209 18e7a4a3ebe8f5869d63682b8f76a80d 207 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 9 22 1.4E-5 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 GYO_3209 18e7a4a3ebe8f5869d63682b8f76a80d 207 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 30 53 1.4E-5 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 GYO_3209 18e7a4a3ebe8f5869d63682b8f76a80d 207 SUPERFAMILY SSF46689 4 74 1.44E-15 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 GYO_3209 18e7a4a3ebe8f5869d63682b8f76a80d 207 ProSitePatterns PS01081 TetR-type HTH domain signature. 21 52 - T 14-10-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site GYO_3209 18e7a4a3ebe8f5869d63682b8f76a80d 207 Gene3D G3DSA:1.10.357.10 2 201 2.4E-34 T 14-10-2018 GYO_0967 5eb523fd33bf6ddc745e3ffd9a0ce637 217 SUPERFAMILY SSF52266 4 212 5.5E-60 T 14-10-2018 GYO_0967 5eb523fd33bf6ddc745e3ffd9a0ce637 217 Pfam PF13472 GDSL-like Lipase/Acylhydrolase family 8 190 1.6E-15 T 14-10-2018 IPR013830 SGNH hydrolase-type esterase domain GYO_0967 5eb523fd33bf6ddc745e3ffd9a0ce637 217 Gene3D G3DSA:3.40.50.1110 4 216 9.3E-70 T 14-10-2018 IPR036514 SGNH hydrolase superfamily GYO_2153 ec01f6a7b3b9a69ac2f6afda723616c4 103 Hamap MF_02014 Cell division suppressor protein YneA [yneA]. 1 102 29.139 T 14-10-2018 IPR022887 Cell division suppressor protein, YneA GYO_2153 ec01f6a7b3b9a69ac2f6afda723616c4 103 Pfam PF01476 LysM domain 39 88 7.1E-12 T 14-10-2018 IPR018392 LysM domain GYO_2153 ec01f6a7b3b9a69ac2f6afda723616c4 103 SMART SM00257 37 88 1.1E-6 T 14-10-2018 IPR018392 LysM domain GYO_2153 ec01f6a7b3b9a69ac2f6afda723616c4 103 Gene3D G3DSA:3.10.350.10 24 99 7.3E-11 T 14-10-2018 IPR036779 LysM domain superfamily GYO_2153 ec01f6a7b3b9a69ac2f6afda723616c4 103 SUPERFAMILY SSF54106 37 89 1.96E-5 T 14-10-2018 GYO_3562 7722cb5582cd5be61b77820b65b6139a 77 Pfam PF01541 GIY-YIG catalytic domain 1 70 3.3E-10 T 14-10-2018 IPR000305 GIY-YIG endonuclease GYO_3562 7722cb5582cd5be61b77820b65b6139a 77 SUPERFAMILY SSF82771 2 73 3.4E-13 T 14-10-2018 IPR035901 GIY-YIG endonuclease superfamily Reactome: R-HSA-5693568|Reactome: R-HSA-6783310 GYO_3562 7722cb5582cd5be61b77820b65b6139a 77 SMART SM00465 1 75 3.9E-9 T 14-10-2018 IPR000305 GIY-YIG endonuclease GYO_3562 7722cb5582cd5be61b77820b65b6139a 77 Gene3D G3DSA:3.40.1440.10 1 75 6.1E-12 T 14-10-2018 IPR035901 GIY-YIG endonuclease superfamily Reactome: R-HSA-5693568|Reactome: R-HSA-6783310 GYO_4313 8850949d95deb8f7743b92bd3add683e 368 Gene3D G3DSA:2.60.120.380 70 192 2.3E-5 T 14-10-2018 GYO_1109 736cbb34f9f2ac7650d3fbf79f677745 518 Gene3D G3DSA:1.20.1720.10 15 253 2.7E-45 T 14-10-2018 GYO_1109 736cbb34f9f2ac7650d3fbf79f677745 518 SUPERFAMILY SSF103473 9 514 1.11E-69 T 14-10-2018 IPR036259 MFS transporter superfamily GYO_1109 736cbb34f9f2ac7650d3fbf79f677745 518 Pfam PF07690 Major Facilitator Superfamily 19 416 4.1E-51 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 GYO_1109 736cbb34f9f2ac7650d3fbf79f677745 518 Gene3D G3DSA:1.20.1250.20 273 431 4.4E-19 T 14-10-2018 GYO_1109 736cbb34f9f2ac7650d3fbf79f677745 518 PRINTS PR01036 Tetracycline resistance protein TetB signature 77 99 1.2E-6 T 14-10-2018 GYO_1109 736cbb34f9f2ac7650d3fbf79f677745 518 PRINTS PR01036 Tetracycline resistance protein TetB signature 204 222 1.2E-6 T 14-10-2018 GYO_1109 736cbb34f9f2ac7650d3fbf79f677745 518 PRINTS PR01036 Tetracycline resistance protein TetB signature 138 162 1.2E-6 T 14-10-2018 GYO_0582 f1609176a6889e84d56560dbd7f48684 281 Pfam PF00561 alpha/beta hydrolase fold 30 268 1.4E-16 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 GYO_0582 f1609176a6889e84d56560dbd7f48684 281 Gene3D G3DSA:3.40.50.1820 1 280 6.3E-36 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold GYO_0582 f1609176a6889e84d56560dbd7f48684 281 SUPERFAMILY SSF53474 8 280 7.13E-35 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold GYO_3465 fa4b03e15f1bc90d9eb7cd78340cd5e0 409 Gene3D G3DSA:1.10.3210.10 202 391 8.5E-29 T 14-10-2018 GYO_3465 fa4b03e15f1bc90d9eb7cd78340cd5e0 409 SMART SM00052 1 200 0.0014 T 14-10-2018 IPR001633 EAL domain GYO_3465 fa4b03e15f1bc90d9eb7cd78340cd5e0 409 Gene3D G3DSA:3.20.20.450 1 201 1.2E-17 T 14-10-2018 IPR035919 EAL domain superfamily GYO_3465 fa4b03e15f1bc90d9eb7cd78340cd5e0 409 SUPERFAMILY SSF109604 186 406 5.34E-46 T 14-10-2018 GYO_3465 fa4b03e15f1bc90d9eb7cd78340cd5e0 409 Pfam PF00563 EAL domain 46 195 3.8E-10 T 14-10-2018 IPR001633 EAL domain GYO_3465 fa4b03e15f1bc90d9eb7cd78340cd5e0 409 Pfam PF08668 HDOD domain 210 329 4.7E-20 T 14-10-2018 IPR013976 Metal-dependent hydrolase HDOD GYO_3465 fa4b03e15f1bc90d9eb7cd78340cd5e0 409 SUPERFAMILY SSF141868 3 198 2.88E-27 T 14-10-2018 IPR035919 EAL domain superfamily GYO_3465 fa4b03e15f1bc90d9eb7cd78340cd5e0 409 PIRSF PIRSF003180 1 409 2.0E-159 T 14-10-2018 IPR014408 Signal transduction c-di-GMP phosphodiesterase, EAL/HD-GYP domain-containing GYO_3521 1a7d36d2c3add101ea77e65e51e4cf1b 166 Pfam PF04608 Phosphatidylglycerophosphatase A 23 159 2.0E-19 T 14-10-2018 IPR007686 YutG/PgpA domain GO:0006629|GO:0008962 GYO_3521 1a7d36d2c3add101ea77e65e51e4cf1b 166 Gene3D G3DSA:1.10.3760.10 1 166 1.2E-74 T 14-10-2018 GYO_3521 1a7d36d2c3add101ea77e65e51e4cf1b 166 PIRSF PIRSF019587 5 166 3.0E-85 T 14-10-2018 IPR026038 Putative phosphatidylglycerophosphatase GYO_3521 1a7d36d2c3add101ea77e65e51e4cf1b 166 SUPERFAMILY SSF101307 14 162 5.76E-54 T 14-10-2018 IPR036681 PgpA-like superfamily GO:0006629|GO:0008962 GYO_1774 ae65cb4b073651c764efd47ce5d3c433 251 SUPERFAMILY SSF100950 75 232 1.99E-32 T 14-10-2018 IPR037171 NagB/RpiA transferase-like GYO_1774 ae65cb4b073651c764efd47ce5d3c433 251 SUPERFAMILY SSF46785 5 60 1.75E-15 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily GYO_1774 ae65cb4b073651c764efd47ce5d3c433 251 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 24 38 1.0E-8 T 14-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 GYO_1774 ae65cb4b073651c764efd47ce5d3c433 251 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 38 56 1.0E-8 T 14-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 GYO_1774 ae65cb4b073651c764efd47ce5d3c433 251 SMART SM01134 73 233 9.0E-65 T 14-10-2018 GYO_1774 ae65cb4b073651c764efd47ce5d3c433 251 SMART SM00420 6 58 7.7E-23 T 14-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 GYO_1774 ae65cb4b073651c764efd47ce5d3c433 251 ProSitePatterns PS00894 DeoR-type HTH domain signature. 6 40 - T 14-10-2018 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 GYO_1774 ae65cb4b073651c764efd47ce5d3c433 251 Pfam PF00455 DeoR C terminal sensor domain 75 231 2.3E-48 T 14-10-2018 IPR014036 DeoR C-terminal sensor domain GYO_1774 ae65cb4b073651c764efd47ce5d3c433 251 Pfam PF08220 DeoR-like helix-turn-helix domain 6 58 1.4E-15 T 14-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 GYO_3345 c57182acf4c5dae0481238d3b397a035 351 Gene3D G3DSA:3.90.1200.10 102 337 2.6E-58 T 14-10-2018 GYO_3345 c57182acf4c5dae0481238d3b397a035 351 SUPERFAMILY SSF56112 8 338 8.84E-32 T 14-10-2018 IPR011009 Protein kinase-like domain superfamily GYO_3345 c57182acf4c5dae0481238d3b397a035 351 Gene3D G3DSA:3.30.200.20 1 101 7.7E-21 T 14-10-2018 GYO_3345 c57182acf4c5dae0481238d3b397a035 351 TIGRFAM TIGR02906 spore_CotS: spore coat protein, CotS family 27 336 1.8E-107 T 14-10-2018 IPR014255 Spore coat protein CotS GYO_4201 c113e1ac5bf5130bfbd8d9f67821f07e 249 Gene3D G3DSA:3.40.109.10 1 249 3.3E-75 T 14-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 GYO_4201 c113e1ac5bf5130bfbd8d9f67821f07e 249 Pfam PF00881 Nitroreductase family 8 165 8.6E-18 T 14-10-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 GYO_4201 c113e1ac5bf5130bfbd8d9f67821f07e 249 PIRSF PIRSF005426 1 249 1.7E-94 T 14-10-2018 IPR016446 Flavin oxidoreductase Frp family GO:0016491|GO:0055114 GYO_4201 c113e1ac5bf5130bfbd8d9f67821f07e 249 SUPERFAMILY SSF55469 1 248 5.89E-71 T 14-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 GYO_4555 3bd79e52e95d12f9b083311aaa93b89c 286 SUPERFAMILY SSF58104 116 281 1.96E-43 T 14-10-2018 GYO_4555 3bd79e52e95d12f9b083311aaa93b89c 286 Gene3D G3DSA:1.10.287.950 111 285 8.6E-39 T 14-10-2018 GYO_4555 3bd79e52e95d12f9b083311aaa93b89c 286 SUPERFAMILY SSF103190 54 117 5.89E-7 T 14-10-2018 IPR029151 Periplasmic sensor-like domain superfamily GYO_4555 3bd79e52e95d12f9b083311aaa93b89c 286 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 151 278 2.6E-30 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 GYO_4555 3bd79e52e95d12f9b083311aaa93b89c 286 SMART SM00283 101 284 9.4E-5 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 GYO_1259 3fce4b04a8a269b94f81e2a736864715 453 Pfam PF03553 Na+/H+ antiporter family 159 450 1.3E-69 T 14-10-2018 IPR018461 Na+/H+ antiporter, NhaC-like, C-terminal GO:0016021 GYO_1259 3fce4b04a8a269b94f81e2a736864715 453 TIGRFAM TIGR00931 antiport_nhaC: Na+/H+ antiporter NhaC 11 450 4.0E-139 T 14-10-2018 IPR004770 Na+/H+ antiporter NhaC GO:0015297|GO:0016021 GYO_3046 7a79155969a465eaa0962d9fdb506710 224 Gene3D G3DSA:1.10.150.20 47 87 3.4E-6 T 14-10-2018 GYO_3046 7a79155969a465eaa0962d9fdb506710 224 TIGRFAM TIGR00608 radc: DNA repair protein RadC 11 224 7.1E-95 T 14-10-2018 IPR001405 Uncharacterised protein family UPF0758 GYO_3046 7a79155969a465eaa0962d9fdb506710 224 ProSitePatterns PS01302 Uncharacterized protein family UPF0758 signature. 173 178 - T 14-10-2018 IPR020891 Uncharacterised protein family UPF0758, conserved site GYO_3046 7a79155969a465eaa0962d9fdb506710 224 Gene3D G3DSA:3.40.140.10 100 224 6.6E-47 T 14-10-2018 GYO_3046 7a79155969a465eaa0962d9fdb506710 224 SUPERFAMILY SSF102712 152 190 2.88E-5 T 14-10-2018 GYO_3046 7a79155969a465eaa0962d9fdb506710 224 Pfam PF04002 RadC-like JAB domain 103 222 3.7E-47 T 14-10-2018 IPR025657 RadC-like JAB domain GYO_3046 7a79155969a465eaa0962d9fdb506710 224 SUPERFAMILY SSF47781 15 89 2.14E-8 T 14-10-2018 IPR010994 RuvA domain 2-like GYO_3321 d65efeea81098ffb960cfda0f7a69884 75 Hamap MF_00386 Putative membrane protein insertion efficiency factor [yidD]. 1 69 26.301 T 14-10-2018 IPR002696 Putative membrane protein insertion efficiency factor GYO_3321 d65efeea81098ffb960cfda0f7a69884 75 TIGRFAM TIGR00278 TIGR00278: putative membrane protein insertion efficiency factor 5 75 1.4E-40 T 14-10-2018 IPR002696 Putative membrane protein insertion efficiency factor GYO_3321 d65efeea81098ffb960cfda0f7a69884 75 Pfam PF01809 Haemolytic domain 2 68 2.2E-32 T 14-10-2018 IPR002696 Putative membrane protein insertion efficiency factor GYO_3321 d65efeea81098ffb960cfda0f7a69884 75 SMART SM01234 1 68 5.9E-51 T 14-10-2018 IPR002696 Putative membrane protein insertion efficiency factor GYO_3321 d65efeea81098ffb960cfda0f7a69884 75 ProDom PD004225 UPF0161 ALPHA-HEMOLYSIN YIDD UNCHARACTERIZED CYTOSOLIC PRECURSOR SIGNAL YTJA RNPA SIMILAR 16 68 2.0E-24 T 14-10-2018 IPR002696 Putative membrane protein insertion efficiency factor GYO_2860 5f16818bf13084277c09103aa4d6271c 146 Pfam PF14568 SMI1-KNR4 cell-wall 14 139 1.8E-21 T 14-10-2018 GYO_2860 5f16818bf13084277c09103aa4d6271c 146 Gene3D G3DSA:3.40.1580.10 2 146 1.7E-24 T 14-10-2018 IPR037883 Knr4/Smi1-like domain superfamily GYO_2860 5f16818bf13084277c09103aa4d6271c 146 SMART SM00860 10 142 2.4E-4 T 14-10-2018 IPR018958 Knr4/Smi1-like domain GYO_2860 5f16818bf13084277c09103aa4d6271c 146 SUPERFAMILY SSF160631 4 146 1.96E-20 T 14-10-2018 GYO_3137 926b49e228e2b49f5754f7a10b72ed6d 155 SUPERFAMILY SSF54364 1 61 7.98E-24 T 14-10-2018 IPR036787 Translation initiation factor 3 (IF-3), N-terminal domain superfamily GO:0003743|GO:0006413 Reactome: R-HSA-5368286 GYO_3137 926b49e228e2b49f5754f7a10b72ed6d 155 Gene3D G3DSA:3.30.110.10 62 155 7.5E-38 T 14-10-2018 IPR036788 Translation initiation factor 3 (IF-3), C-terminal domain superfamily GO:0006413 Reactome: R-HSA-5368286 GYO_3137 926b49e228e2b49f5754f7a10b72ed6d 155 ProSitePatterns PS00938 Initiation factor 3 signature. 41 54 - T 14-10-2018 IPR019813 Translation initiation factor 3, conserved site GO:0003743|GO:0006413 GYO_3137 926b49e228e2b49f5754f7a10b72ed6d 155 TIGRFAM TIGR00168 infC: translation initiation factor IF-3 1 152 7.9E-73 T 14-10-2018 IPR001288 Translation initiation factor 3 GO:0003743|GO:0006413 Reactome: R-HSA-5368286 GYO_3137 926b49e228e2b49f5754f7a10b72ed6d 155 SUPERFAMILY SSF55200 65 154 1.29E-33 T 14-10-2018 IPR036788 Translation initiation factor 3 (IF-3), C-terminal domain superfamily GO:0006413 Reactome: R-HSA-5368286 GYO_3137 926b49e228e2b49f5754f7a10b72ed6d 155 Pfam PF00707 Translation initiation factor IF-3, C-terminal domain 66 151 2.1E-38 T 14-10-2018 IPR019815 Translation initiation factor 3, C-terminal GO:0006413 Reactome: R-HSA-5368286 GYO_3137 926b49e228e2b49f5754f7a10b72ed6d 155 Gene3D G3DSA:3.10.20.80 1 61 3.3E-27 T 14-10-2018 IPR036787 Translation initiation factor 3 (IF-3), N-terminal domain superfamily GO:0003743|GO:0006413 Reactome: R-HSA-5368286 GYO_3137 926b49e228e2b49f5754f7a10b72ed6d 155 Hamap MF_00080 Translation initiation factor IF-3 [infC]. 1 153 26.461 T 14-10-2018 IPR001288 Translation initiation factor 3 GO:0003743|GO:0006413 Reactome: R-HSA-5368286 GYO_3137 926b49e228e2b49f5754f7a10b72ed6d 155 Pfam PF05198 Translation initiation factor IF-3, N-terminal domain 1 59 2.3E-25 T 14-10-2018 IPR019814 Translation initiation factor 3, N-terminal GO:0003743|GO:0006413 Reactome: R-HSA-5368286 GYO_2770 142cdfff941ad98403e476812f0d6426 99 SMART SM00257 49 96 3.8E-4 T 14-10-2018 IPR018392 LysM domain GYO_2770 142cdfff941ad98403e476812f0d6426 99 ProDom PD067165 YQFZ MEMBRANE WALL BH1402 TRANSMEMBRANE OB1935 CELL 1 99 1.0E-49 T 14-10-2018 IPR020506 Uncharacterised protein family YqfZ GYO_1664 328f9b2bdf1dd7af0e59909802654065 607 Gene3D G3DSA:3.30.470.30 3 204 9.9E-35 T 14-10-2018 GYO_1664 328f9b2bdf1dd7af0e59909802654065 607 TIGRFAM TIGR02778 ligD_pol: DNA ligase D, polymerase domain 321 560 1.0E-86 T 14-10-2018 IPR014145 DNA ligase D, polymerase domain GYO_1664 328f9b2bdf1dd7af0e59909802654065 607 SUPERFAMILY SSF56091 12 204 2.88E-33 T 14-10-2018 GYO_1664 328f9b2bdf1dd7af0e59909802654065 607 Gene3D G3DSA:3.90.920.30 327 602 1.8E-80 T 14-10-2018 GYO_1664 328f9b2bdf1dd7af0e59909802654065 607 Pfam PF01068 ATP dependent DNA ligase domain 12 204 2.4E-36 T 14-10-2018 IPR012310 DNA ligase, ATP-dependent, central GO:0003910|GO:0005524|GO:0006281|GO:0006310 GYO_1664 328f9b2bdf1dd7af0e59909802654065 607 TIGRFAM TIGR02779 NHEJ_ligase_lig: DNA ligase D, ligase domain 2 306 3.5E-87 T 14-10-2018 IPR014146 DNA ligase D, ligase domain GYO_1664 328f9b2bdf1dd7af0e59909802654065 607 TIGRFAM TIGR02776 NHEJ_ligase_prk: DNA ligase D 9 588 1.3E-207 T 14-10-2018 IPR014143 DNA ligase D GYO_2405 934ce9239c2286467fbb4a31d443a4f7 264 TIGRFAM TIGR03284 thym_sym: thymidylate synthase 84 264 1.7E-97 T 14-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 GYO_2405 934ce9239c2286467fbb4a31d443a4f7 264 TIGRFAM TIGR03284 thym_sym: thymidylate synthase 2 85 4.5E-43 T 14-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 GYO_2405 934ce9239c2286467fbb4a31d443a4f7 264 Hamap MF_00008 Thymidylate synthase [thyA]. 1 264 40.187 T 14-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 GYO_2405 934ce9239c2286467fbb4a31d443a4f7 264 ProSitePatterns PS00091 Thymidylate synthase active site. 126 154 - T 14-10-2018 IPR020940 Thymidylate synthase, active site GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 GYO_2405 934ce9239c2286467fbb4a31d443a4f7 264 Gene3D G3DSA:3.30.572.10 1 264 4.3E-133 T 14-10-2018 IPR036926 Thymidylate synthase/dCMP hydroxymethylase superfamily KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 GYO_2405 934ce9239c2286467fbb4a31d443a4f7 264 PRINTS PR00108 Thymidylate synthase family signature 197 214 5.0E-51 T 14-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 GYO_2405 934ce9239c2286467fbb4a31d443a4f7 264 PRINTS PR00108 Thymidylate synthase family signature 115 134 5.0E-51 T 14-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 GYO_2405 934ce9239c2286467fbb4a31d443a4f7 264 PRINTS PR00108 Thymidylate synthase family signature 159 185 5.0E-51 T 14-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 GYO_2405 934ce9239c2286467fbb4a31d443a4f7 264 PRINTS PR00108 Thymidylate synthase family signature 42 63 5.0E-51 T 14-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 GYO_2405 934ce9239c2286467fbb4a31d443a4f7 264 PRINTS PR00108 Thymidylate synthase family signature 141 156 5.0E-51 T 14-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 GYO_2405 934ce9239c2286467fbb4a31d443a4f7 264 SUPERFAMILY SSF55831 1 264 1.11E-130 T 14-10-2018 IPR036926 Thymidylate synthase/dCMP hydroxymethylase superfamily KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 GYO_2405 934ce9239c2286467fbb4a31d443a4f7 264 Pfam PF00303 Thymidylate synthase 2 264 4.8E-128 T 14-10-2018 IPR023451 Thymidylate synthase/dCMP hydroxymethylase domain KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 GYO_1282 e9a8ae330fb7257124a9aa3fef3f9ae4 419 Pfam PF12698 ABC-2 family transporter protein 19 391 3.7E-56 T 14-10-2018 GYO_2105 dd8affc44a3e60bc96ad7b57512d2e96 135 Gene3D G3DSA:1.10.1660.10 1 84 3.0E-27 T 14-10-2018 GYO_2105 dd8affc44a3e60bc96ad7b57512d2e96 135 SMART SM00422 12 80 4.2E-29 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 GYO_2105 dd8affc44a3e60bc96ad7b57512d2e96 135 ProSitePatterns PS00552 MerR-type HTH domain signature. 15 37 - T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 GYO_2105 dd8affc44a3e60bc96ad7b57512d2e96 135 SUPERFAMILY SSF46955 12 108 6.87E-20 T 14-10-2018 IPR009061 Putative DNA-binding domain superfamily GYO_2105 dd8affc44a3e60bc96ad7b57512d2e96 135 Pfam PF13411 MerR HTH family regulatory protein 13 78 9.6E-19 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 GYO_0451 620e88c045c2e422793fa81569def4aa 306 SUPERFAMILY SSF56112 31 261 1.66E-31 T 14-10-2018 IPR011009 Protein kinase-like domain superfamily GYO_0451 620e88c045c2e422793fa81569def4aa 306 Pfam PF01636 Phosphotransferase enzyme family 35 268 1.4E-25 T 14-10-2018 IPR002575 Aminoglycoside phosphotransferase GYO_0451 620e88c045c2e422793fa81569def4aa 306 Gene3D G3DSA:3.90.1200.10 116 305 2.2E-27 T 14-10-2018 GYO_3522 f5589c5cdf05a10547953754be228d05 256 PIRSF PIRSF000915 1 115 3.7E-27 T 14-10-2018 IPR006357 HAD-superfamily hydrolase, subfamily IIA GYO_3522 f5589c5cdf05a10547953754be228d05 256 PIRSF PIRSF000915 110 256 2.2E-32 T 14-10-2018 IPR006357 HAD-superfamily hydrolase, subfamily IIA GYO_3522 f5589c5cdf05a10547953754be228d05 256 TIGRFAM TIGR01457 HAD-SF-IIA-hyp2: HAD hydrolase, TIGR01457 family 4 252 8.0E-143 T 14-10-2018 IPR006354 HAD-superfamily hydrolase, subfamily IIA, hypothetical 1 GYO_3522 f5589c5cdf05a10547953754be228d05 256 Gene3D G3DSA:3.40.50.1000 84 179 3.5E-92 T 14-10-2018 IPR023214 HAD superfamily GYO_3522 f5589c5cdf05a10547953754be228d05 256 TIGRFAM TIGR01460 HAD-SF-IIA: HAD hydrolase, family IIA 8 228 4.5E-41 T 14-10-2018 IPR006357 HAD-superfamily hydrolase, subfamily IIA GYO_3522 f5589c5cdf05a10547953754be228d05 256 Pfam PF13344 Haloacid dehalogenase-like hydrolase 8 106 5.0E-29 T 14-10-2018 IPR006357 HAD-superfamily hydrolase, subfamily IIA GYO_3522 f5589c5cdf05a10547953754be228d05 256 Gene3D G3DSA:3.40.50.1000 5 230 3.5E-92 T 14-10-2018 IPR023214 HAD superfamily GYO_3522 f5589c5cdf05a10547953754be228d05 256 Pfam PF13242 HAD-hyrolase-like 179 251 1.4E-21 T 14-10-2018 GYO_3522 f5589c5cdf05a10547953754be228d05 256 SUPERFAMILY SSF56784 4 253 1.24E-73 T 14-10-2018 IPR036412 HAD-like superfamily GYO_3172 e55eefa24eebee2df8ac26a3253d9dc0 319 SUPERFAMILY SSF53784 1 315 4.58E-121 T 14-10-2018 IPR035966 Phosphofructokinase superfamily GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 GYO_3172 e55eefa24eebee2df8ac26a3253d9dc0 319 PIRSF PIRSF000532 1 319 7.0E-126 T 14-10-2018 IPR012003 ATP-dependent 6-phosphofructokinase, prokaryotic-type GO:0005524|GO:0006002|GO:0006096|GO:0008443 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385 GYO_3172 e55eefa24eebee2df8ac26a3253d9dc0 319 Gene3D G3DSA:3.40.50.450 3 279 2.8E-123 T 14-10-2018 GYO_3172 e55eefa24eebee2df8ac26a3253d9dc0 319 Hamap MF_00339 ATP-dependent 6-phosphofructokinase [pfkA]. 1 318 49.724 T 14-10-2018 IPR012828 ATP-dependent 6-phosphofructokinase, prokaryotic GO:0003872|GO:0005524|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385 GYO_3172 e55eefa24eebee2df8ac26a3253d9dc0 319 TIGRFAM TIGR02482 PFKA_ATP: 6-phosphofructokinase 3 299 5.5E-145 T 14-10-2018 IPR012828 ATP-dependent 6-phosphofructokinase, prokaryotic GO:0003872|GO:0005524|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385 GYO_3172 e55eefa24eebee2df8ac26a3253d9dc0 319 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 176 193 1.4E-89 T 14-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 GYO_3172 e55eefa24eebee2df8ac26a3253d9dc0 319 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 239 261 1.4E-89 T 14-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 GYO_3172 e55eefa24eebee2df8ac26a3253d9dc0 319 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 6 25 1.4E-89 T 14-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 GYO_3172 e55eefa24eebee2df8ac26a3253d9dc0 319 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 93 109 1.4E-89 T 14-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 GYO_3172 e55eefa24eebee2df8ac26a3253d9dc0 319 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 120 137 1.4E-89 T 14-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 GYO_3172 e55eefa24eebee2df8ac26a3253d9dc0 319 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 138 156 1.4E-89 T 14-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 GYO_3172 e55eefa24eebee2df8ac26a3253d9dc0 319 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 212 224 1.4E-89 T 14-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 GYO_3172 e55eefa24eebee2df8ac26a3253d9dc0 319 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 158 174 1.4E-89 T 14-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 GYO_3172 e55eefa24eebee2df8ac26a3253d9dc0 319 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 31 44 1.4E-89 T 14-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 GYO_3172 e55eefa24eebee2df8ac26a3253d9dc0 319 ProSitePatterns PS00433 Phosphofructokinase signature. 243 261 - T 14-10-2018 IPR015912 Phosphofructokinase, conserved site GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 GYO_3172 e55eefa24eebee2df8ac26a3253d9dc0 319 Pfam PF00365 Phosphofructokinase 3 275 1.1E-114 T 14-10-2018 IPR000023 Phosphofructokinase domain GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 GYO_3172 e55eefa24eebee2df8ac26a3253d9dc0 319 Gene3D G3DSA:3.40.50.460 142 251 2.8E-123 T 14-10-2018 GYO_3905 0467bb9070bfd57322618aa0beb54054 358 Pfam PF00953 Glycosyl transferase family 4 78 233 4.4E-40 T 14-10-2018 IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|Reactome: R-HSA-446193|Reactome: R-HSA-4549356 GYO_3905 0467bb9070bfd57322618aa0beb54054 358 ProSitePatterns PS01348 MraY family signature 2. 153 164 - T 14-10-2018 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 GYO_1085 0aba89166d94f784790561b144e62d64 104 SUPERFAMILY SSF140453 5 88 1.18E-13 T 14-10-2018 IPR036689 ESAT-6-like superfamily GYO_1085 0aba89166d94f784790561b144e62d64 104 Pfam PF06013 Proteins of 100 residues with WXG 8 80 1.3E-11 T 14-10-2018 IPR010310 Type VII secretion system ESAT-6-like GYO_1085 0aba89166d94f784790561b144e62d64 104 TIGRFAM TIGR03930 WXG100_ESAT6: WXG100 family type VII secretion target 8 85 9.0E-14 T 14-10-2018 IPR010310 Type VII secretion system ESAT-6-like GYO_1085 0aba89166d94f784790561b144e62d64 104 Gene3D G3DSA:1.10.287.1060 1 97 2.4E-13 T 14-10-2018 GYO_3414 d6c9df423e46ce38ab9c7fa17e257547 132 Pfam PF01894 Uncharacterised protein family UPF0047 17 130 2.3E-39 T 14-10-2018 IPR001602 Uncharacterised protein family UPF0047 GYO_3414 d6c9df423e46ce38ab9c7fa17e257547 132 PIRSF PIRSF004681 1 132 1.2E-37 T 14-10-2018 IPR001602 Uncharacterised protein family UPF0047 GYO_3414 d6c9df423e46ce38ab9c7fa17e257547 132 TIGRFAM TIGR00149 TIGR00149_YjbQ: secondary thiamine-phosphate synthase enzyme 4 132 8.9E-59 T 14-10-2018 IPR001602 Uncharacterised protein family UPF0047 GYO_3414 d6c9df423e46ce38ab9c7fa17e257547 132 SUPERFAMILY SSF111038 2 131 8.5E-47 T 14-10-2018 IPR035917 YjbQ-like superfamily GYO_3414 d6c9df423e46ce38ab9c7fa17e257547 132 ProSitePatterns PS01314 Uncharacterized protein family UPF0047 signature. 95 113 - T 14-10-2018 IPR001602 Uncharacterised protein family UPF0047 GYO_3414 d6c9df423e46ce38ab9c7fa17e257547 132 Gene3D G3DSA:2.60.120.460 1 132 4.2E-54 T 14-10-2018 IPR035917 YjbQ-like superfamily GYO_3972 2f524a25115b8626a0c3a7371c17bf15 311 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 21 79 1.3E-16 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 GYO_3972 2f524a25115b8626a0c3a7371c17bf15 311 Pfam PF03466 LysR substrate binding domain 105 310 4.4E-47 T 14-10-2018 IPR005119 LysR, substrate-binding GYO_3972 2f524a25115b8626a0c3a7371c17bf15 311 Gene3D G3DSA:3.40.190.10 108 305 2.6E-38 T 14-10-2018 GYO_3972 2f524a25115b8626a0c3a7371c17bf15 311 SUPERFAMILY SSF46785 20 104 3.32E-18 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily GYO_3972 2f524a25115b8626a0c3a7371c17bf15 311 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 36 47 5.0E-7 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 GYO_3972 2f524a25115b8626a0c3a7371c17bf15 311 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 57 68 5.0E-7 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 GYO_3972 2f524a25115b8626a0c3a7371c17bf15 311 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 47 57 5.0E-7 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 GYO_3972 2f524a25115b8626a0c3a7371c17bf15 311 Gene3D G3DSA:1.10.10.10 14 103 2.4E-21 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily GYO_3972 2f524a25115b8626a0c3a7371c17bf15 311 SUPERFAMILY SSF53850 106 310 1.9E-40 T 14-10-2018 GYO_3972 2f524a25115b8626a0c3a7371c17bf15 311 Gene3D G3DSA:3.40.190.10 180 283 2.6E-38 T 14-10-2018 GYO_3019 74da4e679275a3ab6d5aa0d10641640a 175 SUPERFAMILY SSF56112 7 115 8.42E-14 T 14-10-2018 IPR011009 Protein kinase-like domain superfamily GYO_3019 74da4e679275a3ab6d5aa0d10641640a 175 Gene3D G3DSA:3.30.200.20 8 58 3.7E-7 T 14-10-2018 GYO_3019 74da4e679275a3ab6d5aa0d10641640a 175 Gene3D G3DSA:1.10.510.10 59 119 3.7E-7 T 14-10-2018 GYO_1643 e4c290a2b273f949d2e26ff921af016e 277 Gene3D G3DSA:3.30.750.24 163 277 7.4E-37 T 14-10-2018 IPR036513 STAS domain superfamily GYO_1643 e4c290a2b273f949d2e26ff921af016e 277 SUPERFAMILY SSF52091 166 275 7.85E-17 T 14-10-2018 IPR036513 STAS domain superfamily GYO_1643 e4c290a2b273f949d2e26ff921af016e 277 Pfam PF01740 STAS domain 176 271 7.2E-15 T 14-10-2018 IPR002645 STAS domain GYO_1643 e4c290a2b273f949d2e26ff921af016e 277 Gene3D G3DSA:1.20.1050.10 59 161 7.6E-5 T 14-10-2018 GYO_4427 dee927040f17f397daa3fb378423b4cb 641 SUPERFAMILY SSF56300 187 555 2.44E-9 T 14-10-2018 GYO_4427 dee927040f17f397daa3fb378423b4cb 641 Pfam PF06874 Firmicute fructose-1,6-bisphosphatase 4 637 2.1E-284 T 14-10-2018 IPR009164 Fructose-1,6-bisphosphatase class 3 GO:0006094|GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484 GYO_4427 dee927040f17f397daa3fb378423b4cb 641 PIRSF PIRSF000906 1 641 0.0 T 14-10-2018 IPR009164 Fructose-1,6-bisphosphatase class 3 GO:0006094|GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484 GYO_4427 dee927040f17f397daa3fb378423b4cb 641 Hamap MF_01854 Fructose-1,6-bisphosphatase class 3 [fbp]. 2 641 39.279 T 14-10-2018 IPR009164 Fructose-1,6-bisphosphatase class 3 GO:0006094|GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484 GYO_2594 795fc1a832d745324158001fba938c6d 329 PRINTS PR00139 Asparaginase/glutaminase family signature 4 15 8.9E-16 T 14-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 GYO_2594 795fc1a832d745324158001fba938c6d 329 PRINTS PR00139 Asparaginase/glutaminase family signature 253 271 8.9E-16 T 14-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 GYO_2594 795fc1a832d745324158001fba938c6d 329 PRINTS PR00139 Asparaginase/glutaminase family signature 77 95 8.9E-16 T 14-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 GYO_2594 795fc1a832d745324158001fba938c6d 329 PIRSF PIRSF001220 1 327 1.0E-102 T 14-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 GYO_2594 795fc1a832d745324158001fba938c6d 329 PIRSF PIRSF500176 1 325 6.5E-112 T 14-10-2018 GYO_2594 795fc1a832d745324158001fba938c6d 329 Gene3D G3DSA:3.40.50.1170 1 199 1.5E-69 T 14-10-2018 IPR037152 L-asparaginase, N-terminal domain superfamily Reactome: R-HSA-70614 GYO_2594 795fc1a832d745324158001fba938c6d 329 ProSitePatterns PS00144 Asparaginase / glutaminase active site signature 1. 6 14 - T 14-10-2018 IPR020827 Asparaginase/glutaminase, active site 1 GO:0006520 GYO_2594 795fc1a832d745324158001fba938c6d 329 SMART SM00870 3 316 1.5E-117 T 14-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 GYO_2594 795fc1a832d745324158001fba938c6d 329 Pfam PF00710 Asparaginase, N-terminal 3 187 2.4E-65 T 14-10-2018 IPR027474 L-asparaginase, N-terminal Reactome: R-HSA-70614 GYO_2594 795fc1a832d745324158001fba938c6d 329 ProSitePatterns PS00917 Asparaginase / glutaminase active site signature 2. 78 88 - T 14-10-2018 IPR027475 Asparaginase/glutaminase, active site 2 Reactome: R-HSA-70614 GYO_2594 795fc1a832d745324158001fba938c6d 329 SUPERFAMILY SSF53774 1 327 9.16E-99 T 14-10-2018 IPR036152 Asparaginase/glutaminase-like superfamily Reactome: R-HSA-70614 GYO_2594 795fc1a832d745324158001fba938c6d 329 Gene3D G3DSA:3.40.50.40 200 328 7.4E-35 T 14-10-2018 IPR027473 L-asparaginase, C-terminal Reactome: R-HSA-70614 GYO_2594 795fc1a832d745324158001fba938c6d 329 TIGRFAM TIGR00519 asnASE_I: L-asparaginase, type I 1 328 7.6E-149 T 14-10-2018 IPR006033 L-asparaginase, type I GO:0004067|GO:0006520 Reactome: R-HSA-70614 GYO_3151 8fe1e2eba56b8d8106e05bc4577419c9 126 SUPERFAMILY SSF56276 2 113 1.67E-40 T 14-10-2018 IPR016067 S-adenosylmethionine decarboxylase, core GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834|Reactome: R-HSA-351202 GYO_3151 8fe1e2eba56b8d8106e05bc4577419c9 126 TIGRFAM TIGR03330 SAM_DCase_Bsu: S-adenosylmethionine decarboxylase proenzyme 3 112 3.0E-41 T 14-10-2018 IPR017716 S-adenosylmethionine decarboxylase proenzyme GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834 GYO_3151 8fe1e2eba56b8d8106e05bc4577419c9 126 Pfam PF02675 S-adenosylmethionine decarboxylase 7 112 7.5E-37 T 14-10-2018 IPR003826 S-adenosylmethionine decarboxylase family, prokaryotic GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834 GYO_3151 8fe1e2eba56b8d8106e05bc4577419c9 126 Gene3D G3DSA:3.30.360.110 1 62 5.6E-26 T 14-10-2018 GYO_3151 8fe1e2eba56b8d8106e05bc4577419c9 126 Hamap MF_00464 S-adenosylmethionine decarboxylase proenzyme [speH]. 1 116 31.789 T 14-10-2018 IPR017716 S-adenosylmethionine decarboxylase proenzyme GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834 GYO_3151 8fe1e2eba56b8d8106e05bc4577419c9 126 Gene3D G3DSA:3.30.160.750 63 125 3.5E-18 T 14-10-2018 GYO_3335 7c48d9b1805bf620250d45eb3be484a1 274 PRINTS PR00412 Epoxide hydrolase signature 31 49 4.4E-6 T 14-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 GYO_3335 7c48d9b1805bf620250d45eb3be484a1 274 PRINTS PR00412 Epoxide hydrolase signature 248 270 4.4E-6 T 14-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 GYO_3335 7c48d9b1805bf620250d45eb3be484a1 274 PRINTS PR00412 Epoxide hydrolase signature 109 122 4.4E-6 T 14-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 GYO_3335 7c48d9b1805bf620250d45eb3be484a1 274 PRINTS PR00412 Epoxide hydrolase signature 216 232 4.4E-6 T 14-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 GYO_3335 7c48d9b1805bf620250d45eb3be484a1 274 Hamap MF_01660 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase [menH]. 14 272 36.409 T 14-10-2018 IPR022485 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase GO:0009234|GO:0070205 KEGG: 00130+4.2.99.20|MetaCyc: PWY-5837 GYO_3335 7c48d9b1805bf620250d45eb3be484a1 274 Gene3D G3DSA:3.40.50.1820 11 273 7.4E-67 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold GYO_3335 7c48d9b1805bf620250d45eb3be484a1 274 TIGRFAM TIGR03695 menH_SHCHC: 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase 24 271 6.5E-90 T 14-10-2018 IPR022485 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase GO:0009234|GO:0070205 KEGG: 00130+4.2.99.20|MetaCyc: PWY-5837 GYO_3335 7c48d9b1805bf620250d45eb3be484a1 274 PRINTS PR00111 Alpha/beta hydrolase fold signature 95 108 2.1E-10 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 GYO_3335 7c48d9b1805bf620250d45eb3be484a1 274 PRINTS PR00111 Alpha/beta hydrolase fold signature 49 64 2.1E-10 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 GYO_3335 7c48d9b1805bf620250d45eb3be484a1 274 PRINTS PR00111 Alpha/beta hydrolase fold signature 109 122 2.1E-10 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 GYO_3335 7c48d9b1805bf620250d45eb3be484a1 274 SUPERFAMILY SSF53474 3 272 1.46E-54 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold GYO_3335 7c48d9b1805bf620250d45eb3be484a1 274 Pfam PF00561 alpha/beta hydrolase fold 26 259 5.1E-26 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 GYO_1236 c3ff130796fb526adef243bd2a78550b 451 Pfam PF00209 Sodium:neurotransmitter symporter family 8 124 1.8E-22 T 14-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 GYO_1236 c3ff130796fb526adef243bd2a78550b 451 Pfam PF00209 Sodium:neurotransmitter symporter family 152 444 7.7E-27 T 14-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 GYO_1236 c3ff130796fb526adef243bd2a78550b 451 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 294 314 2.9E-12 T 14-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 GYO_1236 c3ff130796fb526adef243bd2a78550b 451 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 89 115 2.9E-12 T 14-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 GYO_1236 c3ff130796fb526adef243bd2a78550b 451 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 43 62 2.9E-12 T 14-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 GYO_1236 c3ff130796fb526adef243bd2a78550b 451 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 14 35 2.9E-12 T 14-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 GYO_1236 c3ff130796fb526adef243bd2a78550b 451 SUPERFAMILY SSF161070 8 446 9.94E-126 T 14-10-2018 IPR037272 Sodium:neurotransmitter symporter superfamily GO:0005328 GYO_1236 c3ff130796fb526adef243bd2a78550b 451 ProSitePatterns PS00610 Sodium:neurotransmitter symporter family signature 1. 30 44 - T 14-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 GYO_2039 3d22e396a157ec0922fa081d595c6579 410 Pfam PF07690 Major Facilitator Superfamily 19 285 1.6E-40 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 GYO_2039 3d22e396a157ec0922fa081d595c6579 410 SUPERFAMILY SSF103473 6 402 2.49E-68 T 14-10-2018 IPR036259 MFS transporter superfamily GYO_2039 3d22e396a157ec0922fa081d595c6579 410 Gene3D G3DSA:1.20.1250.20 4 403 7.6E-67 T 14-10-2018 GYO_2039 3d22e396a157ec0922fa081d595c6579 410 PRINTS PR01035 Tetracycline resistance protein signature 20 36 6.5E-7 T 14-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 GYO_2039 3d22e396a157ec0922fa081d595c6579 410 PRINTS PR01035 Tetracycline resistance protein signature 346 369 6.5E-7 T 14-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 GYO_2039 3d22e396a157ec0922fa081d595c6579 410 PRINTS PR01035 Tetracycline resistance protein signature 170 190 6.5E-7 T 14-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 GYO_2039 3d22e396a157ec0922fa081d595c6579 410 PRINTS PR01035 Tetracycline resistance protein signature 142 164 6.5E-7 T 14-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 GYO_2779 e00836e4ba87d944fd36699613bb23f3 240 Pfam PF14181 YqfQ-like protein 68 240 2.4E-46 T 14-10-2018 IPR025571 YqfQ-like protein GYO_1810 ad2e442a6462d965d37c2ce405312e53 304 TIGRFAM TIGR00027 mthyl_TIGR00027: methyltransferase, TIGR00027 family 8 283 5.8E-39 T 14-10-2018 IPR011610 S-adenosyl-L-methionine-dependent methyltransferase, putative GO:0008168 GYO_1810 ad2e442a6462d965d37c2ce405312e53 304 Pfam PF04072 Leucine carboxyl methyltransferase 11 206 9.3E-47 T 14-10-2018 IPR007213 Methyltransferase Ppm1/Ppm2/Tcmp GO:0008168|GO:0032259 GYO_1810 ad2e442a6462d965d37c2ce405312e53 304 SUPERFAMILY SSF53335 7 303 3.1E-56 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase GYO_1810 ad2e442a6462d965d37c2ce405312e53 304 Gene3D G3DSA:3.40.50.150 2 303 1.7E-44 T 14-10-2018 GYO_3913 3a304dd8b0e87c7b36c6707f5660543d 219 Pfam PF02397 Bacterial sugar transferase 34 213 2.0E-66 T 14-10-2018 IPR003362 Bacterial sugar transferase GYO_3913 3a304dd8b0e87c7b36c6707f5660543d 219 TIGRFAM TIGR03025 EPS_sugtrans: exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase 12 219 1.7E-91 T 14-10-2018 IPR017475 Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase GYO_2986 3350f69d7506b04491bc6c5ccb079b52 154 Pfam PF05239 PRC-barrel domain 4 46 2.6E-5 T 14-10-2018 IPR027275 PRC-barrel domain GYO_2986 3350f69d7506b04491bc6c5ccb079b52 154 SUPERFAMILY SSF50346 84 137 1.12E-6 T 14-10-2018 IPR011033 PRC-barrel-like superfamily GYO_1352 46e494414e27a63eef64b498258e0f65 168 ProSitePatterns PS00761 Signal peptidases I signature 3. 136 149 - T 14-10-2018 IPR019758 Peptidase S26A, signal peptidase I, conserved site GO:0008236|GO:0016021 GYO_1352 46e494414e27a63eef64b498258e0f65 168 ProSitePatterns PS00760 Signal peptidases I lysine active site. 75 87 - T 14-10-2018 IPR019757 Peptidase S26A, signal peptidase I, lysine active site GO:0008236|GO:0016021 GYO_1352 46e494414e27a63eef64b498258e0f65 168 Pfam PF00717 Peptidase S24-like 29 97 9.5E-19 T 14-10-2018 IPR015927 Peptidase S24/S26A/S26B/S26C GYO_1352 46e494414e27a63eef64b498258e0f65 168 Gene3D G3DSA:2.10.109.10 53 166 1.5E-38 T 14-10-2018 GYO_1352 46e494414e27a63eef64b498258e0f65 168 ProSitePatterns PS00501 Signal peptidases I serine active site. 32 39 - T 14-10-2018 IPR019756 Peptidase S26A, signal peptidase I, serine active site GO:0008236|GO:0016021 Reactome: R-HSA-1799339|Reactome: R-HSA-381771|Reactome: R-HSA-400511|Reactome: R-HSA-422085 GYO_1352 46e494414e27a63eef64b498258e0f65 168 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 131 150 9.9E-18 T 14-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 GYO_1352 46e494414e27a63eef64b498258e0f65 168 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 23 39 9.9E-18 T 14-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 GYO_1352 46e494414e27a63eef64b498258e0f65 168 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 73 85 9.9E-18 T 14-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 GYO_1352 46e494414e27a63eef64b498258e0f65 168 SUPERFAMILY SSF51306 24 164 4.97E-45 T 14-10-2018 IPR036286 LexA/Signal peptidase-like superfamily GYO_1352 46e494414e27a63eef64b498258e0f65 168 TIGRFAM TIGR02227 sigpep_I_bact: signal peptidase I 8 164 3.9E-45 T 14-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 GYO_2643 99464b0849a62181a1b1a09b3e48261f 255 SUPERFAMILY SSF53850 1 253 8.76E-71 T 14-10-2018 GYO_2643 99464b0849a62181a1b1a09b3e48261f 255 SMART SM00062 33 254 1.1E-83 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF GYO_2643 99464b0849a62181a1b1a09b3e48261f 255 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 34 252 6.5E-63 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF GYO_2643 99464b0849a62181a1b1a09b3e48261f 255 SMART SM00079 33 253 2.2E-5 T 14-10-2018 IPR001320 Ionotropic glutamate receptor GO:0004970|GO:0016020 GYO_2643 99464b0849a62181a1b1a09b3e48261f 255 Gene3D G3DSA:3.40.190.10 35 251 2.3E-69 T 14-10-2018 GYO_2643 99464b0849a62181a1b1a09b3e48261f 255 Gene3D G3DSA:3.40.190.10 118 211 2.3E-69 T 14-10-2018 GYO_0579 d848451de9c94ce8e79152ff6d4f76b0 473 Hamap MF_01985 Phenolic acid decarboxylase subunit C. 1 472 74.038 T 14-10-2018 IPR032902 Phenolic acid decarboxylase subunit C GO:0016831 GYO_0579 d848451de9c94ce8e79152ff6d4f76b0 473 Pfam PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase 10 415 8.9E-117 T 14-10-2018 IPR002830 UbiD decarboxylyase family GO:0016831 KEGG: 00130+4.1.1.98|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-6708|MetaCyc: PWY-6978 GYO_0579 d848451de9c94ce8e79152ff6d4f76b0 473 Gene3D G3DSA:3.40.1670.10 326 440 8.5E-29 T 14-10-2018 GYO_0579 d848451de9c94ce8e79152ff6d4f76b0 473 SUPERFAMILY SSF143968 311 462 4.18E-41 T 14-10-2018 GYO_0579 d848451de9c94ce8e79152ff6d4f76b0 473 TIGRFAM TIGR00148 TIGR00148: decarboxylase, UbiD family 6 441 5.4E-166 T 14-10-2018 IPR002830 UbiD decarboxylyase family GO:0016831 KEGG: 00130+4.1.1.98|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-6708|MetaCyc: PWY-6978 GYO_0579 d848451de9c94ce8e79152ff6d4f76b0 473 SUPERFAMILY SSF50475 3 308 9.81E-89 T 14-10-2018 GYO_3314 9a6784a581625933567cef3483c1f9da 158 SUPERFAMILY SSF55811 28 116 5.01E-20 T 14-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 GYO_3314 9a6784a581625933567cef3483c1f9da 158 ProSitePatterns PS00893 Nudix box signature. 53 74 - T 14-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 GYO_3314 9a6784a581625933567cef3483c1f9da 158 Gene3D G3DSA:3.90.79.10 1 158 1.3E-50 T 14-10-2018 GYO_3314 9a6784a581625933567cef3483c1f9da 158 TIGRFAM TIGR02705 nudix_YtkD: nucleoside triphosphatase YtkD 3 155 1.5E-66 T 14-10-2018 IPR014078 Nucleoside triphosphatase YtkD MetaCyc: PWY-6502 GYO_3314 9a6784a581625933567cef3483c1f9da 158 Pfam PF00293 NUDIX domain 30 88 9.3E-13 T 14-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 GYO_3314 9a6784a581625933567cef3483c1f9da 158 PRINTS PR00502 NUDIX hydrolase family signature 62 77 1.4E-6 T 14-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 GYO_3314 9a6784a581625933567cef3483c1f9da 158 PRINTS PR00502 NUDIX hydrolase family signature 48 62 1.4E-6 T 14-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 GYO_0573 dd40d1e6dbc7c793fa118819f5f9e6e0 215 Gene3D G3DSA:1.25.40.10 1 72 8.2E-19 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 GYO_0573 dd40d1e6dbc7c793fa118819f5f9e6e0 215 Gene3D G3DSA:1.25.40.10 73 212 9.7E-25 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 GYO_0573 dd40d1e6dbc7c793fa118819f5f9e6e0 215 SUPERFAMILY SSF48452 38 174 8.43E-16 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 GYO_0573 dd40d1e6dbc7c793fa118819f5f9e6e0 215 SMART SM00028 80 113 10.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 GYO_0573 dd40d1e6dbc7c793fa118819f5f9e6e0 215 SMART SM00028 119 152 1.4 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 GYO_0573 dd40d1e6dbc7c793fa118819f5f9e6e0 215 SMART SM00028 37 70 0.18 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 GYO_0573 dd40d1e6dbc7c793fa118819f5f9e6e0 215 Pfam PF13424 Tetratricopeptide repeat 83 149 1.0E-8 T 14-10-2018 GYO_0666 7408b39ea04283bbc0fb16c08773008c 421 PRINTS PR00173 Glutamate-aspartate symporter signature 189 208 1.9E-32 T 14-10-2018 GYO_0666 7408b39ea04283bbc0fb16c08773008c 421 PRINTS PR00173 Glutamate-aspartate symporter signature 72 97 1.9E-32 T 14-10-2018 GYO_0666 7408b39ea04283bbc0fb16c08773008c 421 PRINTS PR00173 Glutamate-aspartate symporter signature 216 235 1.9E-32 T 14-10-2018 GYO_0666 7408b39ea04283bbc0fb16c08773008c 421 PRINTS PR00173 Glutamate-aspartate symporter signature 289 315 1.9E-32 T 14-10-2018 GYO_0666 7408b39ea04283bbc0fb16c08773008c 421 PRINTS PR00173 Glutamate-aspartate symporter signature 324 343 1.9E-32 T 14-10-2018 GYO_0666 7408b39ea04283bbc0fb16c08773008c 421 PRINTS PR00173 Glutamate-aspartate symporter signature 5 25 1.9E-32 T 14-10-2018 GYO_0666 7408b39ea04283bbc0fb16c08773008c 421 PRINTS PR00173 Glutamate-aspartate symporter signature 142 164 1.9E-32 T 14-10-2018 GYO_0666 7408b39ea04283bbc0fb16c08773008c 421 ProSitePatterns PS00714 Sodium:dicarboxylate symporter family signature 2. 292 315 - T 14-10-2018 IPR018107 Sodium:dicarboxylate symporter, conserved site GYO_0666 7408b39ea04283bbc0fb16c08773008c 421 ProSitePatterns PS00713 Sodium:dicarboxylate symporter family signature 1. 34 49 - T 14-10-2018 IPR018107 Sodium:dicarboxylate symporter, conserved site GYO_0666 7408b39ea04283bbc0fb16c08773008c 421 Pfam PF00375 Sodium:dicarboxylate symporter family 7 397 1.0E-117 T 14-10-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 GYO_0666 7408b39ea04283bbc0fb16c08773008c 421 Gene3D G3DSA:1.10.3860.10 2 416 7.3E-129 T 14-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 GYO_0666 7408b39ea04283bbc0fb16c08773008c 421 SUPERFAMILY SSF118215 7 399 5.49E-123 T 14-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 GYO_0666 7408b39ea04283bbc0fb16c08773008c 421 Hamap MF_01300 C4-dicarboxylate transport protein [dctA]. 1 421 36.195 T 14-10-2018 IPR023954 C4-dicarboxylate transport protein GO:0006835|GO:0015293|GO:0016021 GYO_0284 f1149f10c4742a479bb1910b6d0b5046 67 ProDom PD027572 XTRA PBSX RELATED YQAO ELEMENT PHAGE PHAGE-LIKE 9 62 1.0E-5 T 14-10-2018 IPR035530 Phage-like element PBSX protein XtrA GYO_0284 f1149f10c4742a479bb1910b6d0b5046 67 Pfam PF17356 Phage-like element PBSX protein XtrA 3 66 2.1E-11 T 14-10-2018 IPR035530 Phage-like element PBSX protein XtrA GYO_0205 f1149f10c4742a479bb1910b6d0b5046 67 ProDom PD027572 XTRA PBSX RELATED YQAO ELEMENT PHAGE PHAGE-LIKE 9 62 1.0E-5 T 14-10-2018 IPR035530 Phage-like element PBSX protein XtrA GYO_0205 f1149f10c4742a479bb1910b6d0b5046 67 Pfam PF17356 Phage-like element PBSX protein XtrA 3 66 2.1E-11 T 14-10-2018 IPR035530 Phage-like element PBSX protein XtrA GYO_2935 85a9a3a9c5d7739d36e0da58c2ed8e7a 349 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 65 79 - T 14-10-2018 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 GYO_2935 85a9a3a9c5d7739d36e0da58c2ed8e7a 349 SMART SM00829 13 344 2.9E-8 T 14-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 GYO_2935 85a9a3a9c5d7739d36e0da58c2ed8e7a 349 SUPERFAMILY SSF51735 152 314 1.21E-44 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily GYO_2935 85a9a3a9c5d7739d36e0da58c2ed8e7a 349 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 31 146 1.6E-27 T 14-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 GYO_2935 85a9a3a9c5d7739d36e0da58c2ed8e7a 349 SUPERFAMILY SSF50129 13 175 3.65E-54 T 14-10-2018 IPR011032 GroES-like superfamily GYO_2935 85a9a3a9c5d7739d36e0da58c2ed8e7a 349 Gene3D G3DSA:3.40.50.720 162 316 8.0E-139 T 14-10-2018 GYO_2935 85a9a3a9c5d7739d36e0da58c2ed8e7a 349 Pfam PF00107 Zinc-binding dehydrogenase 188 310 1.3E-25 T 14-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 GYO_2935 85a9a3a9c5d7739d36e0da58c2ed8e7a 349 Gene3D G3DSA:3.90.180.10 15 344 8.0E-139 T 14-10-2018 GYO_3557 ce383602b7d76ce3f85046c04a517da1 284 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 221 234 - T 14-10-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 GYO_3557 ce383602b7d76ce3f85046c04a517da1 284 Gene3D G3DSA:3.40.1190.20 1 267 2.3E-50 T 14-10-2018 IPR029056 Ribokinase-like GYO_3557 ce383602b7d76ce3f85046c04a517da1 284 Pfam PF00294 pfkB family carbohydrate kinase 9 263 4.2E-41 T 14-10-2018 IPR011611 Carbohydrate kinase PfkB GYO_3557 ce383602b7d76ce3f85046c04a517da1 284 SUPERFAMILY SSF53613 1 267 4.05E-52 T 14-10-2018 IPR029056 Ribokinase-like GYO_2435 b9b1d5d695fe7b8287d3836c2b914a4e 196 SUPERFAMILY SSF51569 6 184 2.38E-56 T 14-10-2018 GYO_2435 b9b1d5d695fe7b8287d3836c2b914a4e 196 ProSitePatterns PS00160 KDPG and KHG aldolases Schiff-base forming residue. 125 138 - T 14-10-2018 IPR031338 KDPG/KHG aldolase, active site 2 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 GYO_2435 b9b1d5d695fe7b8287d3836c2b914a4e 196 TIGRFAM TIGR01182 eda: 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase 7 186 1.3E-69 T 14-10-2018 IPR000887 KDPG/KHG aldolase GO:0016829 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 GYO_2435 b9b1d5d695fe7b8287d3836c2b914a4e 196 Gene3D G3DSA:3.20.20.70 1 196 4.2E-63 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 GYO_2435 b9b1d5d695fe7b8287d3836c2b914a4e 196 Pfam PF01081 KDPG and KHG aldolase 6 196 1.9E-80 T 14-10-2018 IPR000887 KDPG/KHG aldolase GO:0016829 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 GYO_4156 00cb0d7873b4b39cb4e6e4878a3b2edc 375 Gene3D G3DSA:1.20.1250.20 1 355 4.3E-19 T 14-10-2018 GYO_4156 00cb0d7873b4b39cb4e6e4878a3b2edc 375 PRINTS PR01988 Putative bacilysin exporter bacE signature 330 353 3.8E-124 T 14-10-2018 IPR022324 Bacilysin exporter BacE, putative GO:0016020|GO:0042891 GYO_4156 00cb0d7873b4b39cb4e6e4878a3b2edc 375 PRINTS PR01988 Putative bacilysin exporter bacE signature 114 135 3.8E-124 T 14-10-2018 IPR022324 Bacilysin exporter BacE, putative GO:0016020|GO:0042891 GYO_4156 00cb0d7873b4b39cb4e6e4878a3b2edc 375 PRINTS PR01988 Putative bacilysin exporter bacE signature 228 245 3.8E-124 T 14-10-2018 IPR022324 Bacilysin exporter BacE, putative GO:0016020|GO:0042891 GYO_4156 00cb0d7873b4b39cb4e6e4878a3b2edc 375 PRINTS PR01988 Putative bacilysin exporter bacE signature 75 93 3.8E-124 T 14-10-2018 IPR022324 Bacilysin exporter BacE, putative GO:0016020|GO:0042891 GYO_4156 00cb0d7873b4b39cb4e6e4878a3b2edc 375 PRINTS PR01988 Putative bacilysin exporter bacE signature 141 158 3.8E-124 T 14-10-2018 IPR022324 Bacilysin exporter BacE, putative GO:0016020|GO:0042891 GYO_4156 00cb0d7873b4b39cb4e6e4878a3b2edc 375 PRINTS PR01988 Putative bacilysin exporter bacE signature 267 290 3.8E-124 T 14-10-2018 IPR022324 Bacilysin exporter BacE, putative GO:0016020|GO:0042891 GYO_4156 00cb0d7873b4b39cb4e6e4878a3b2edc 375 PRINTS PR01988 Putative bacilysin exporter bacE signature 52 70 3.8E-124 T 14-10-2018 IPR022324 Bacilysin exporter BacE, putative GO:0016020|GO:0042891 GYO_4156 00cb0d7873b4b39cb4e6e4878a3b2edc 375 PRINTS PR01988 Putative bacilysin exporter bacE signature 191 213 3.8E-124 T 14-10-2018 IPR022324 Bacilysin exporter BacE, putative GO:0016020|GO:0042891 GYO_4156 00cb0d7873b4b39cb4e6e4878a3b2edc 375 PRINTS PR01988 Putative bacilysin exporter bacE signature 26 44 3.8E-124 T 14-10-2018 IPR022324 Bacilysin exporter BacE, putative GO:0016020|GO:0042891 GYO_4156 00cb0d7873b4b39cb4e6e4878a3b2edc 375 Pfam PF07690 Major Facilitator Superfamily 3 328 8.8E-16 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 GYO_4156 00cb0d7873b4b39cb4e6e4878a3b2edc 375 SUPERFAMILY SSF103473 4 354 6.28E-28 T 14-10-2018 IPR036259 MFS transporter superfamily GYO_2147 70e8880d541b2a00b1f90cdcb8b96235 252 Pfam PF05908 Poly-gamma-glutamate hydrolase 55 242 1.9E-70 T 14-10-2018 IPR008585 Poly-gamma-glutamate hydrolase GYO_2147 70e8880d541b2a00b1f90cdcb8b96235 252 Gene3D G3DSA:3.40.630.100 49 252 4.3E-61 T 14-10-2018 IPR038128 Poly-gamma-glutamate hydrolase superfamily GYO_3413 73aa24e3d6b72e6921fe5744fb600322 343 Gene3D G3DSA:3.20.20.70 1 343 2.9E-108 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 GYO_3413 73aa24e3d6b72e6921fe5744fb600322 343 SUPERFAMILY SSF51412 9 331 3.51E-59 T 14-10-2018 GYO_3413 73aa24e3d6b72e6921fe5744fb600322 343 Pfam PF03060 Nitronate monooxygenase 5 341 1.2E-99 T 14-10-2018 IPR004136 Nitronate monooxygenase GO:0018580|GO:0055114 KEGG: 00910+1.13.12.16|MetaCyc: PWY-723 GYO_0997 2e0847c02e91a5792b08e4324d1e0839 461 Gene3D G3DSA:1.20.1740.10 21 460 2.4E-127 T 14-10-2018 GYO_0997 2e0847c02e91a5792b08e4324d1e0839 461 PIRSF PIRSF006060 11 461 3.4E-85 T 14-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 GYO_0997 2e0847c02e91a5792b08e4324d1e0839 461 Pfam PF13520 Amino acid permease 26 429 8.7E-60 T 14-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 GYO_1772 eedab4bc16873b1830766ea06ac424d2 230 SMART SM00382 30 217 6.0E-14 T 14-10-2018 IPR003593 AAA+ ATPase domain GYO_1772 eedab4bc16873b1830766ea06ac424d2 230 SUPERFAMILY SSF52540 1 222 2.79E-75 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase GYO_1772 eedab4bc16873b1830766ea06ac424d2 230 ProSitePatterns PS00211 ABC transporters family signature. 142 156 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 GYO_1772 eedab4bc16873b1830766ea06ac424d2 230 Pfam PF00005 ABC transporter 21 169 3.4E-35 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 GYO_1772 eedab4bc16873b1830766ea06ac424d2 230 Gene3D G3DSA:3.40.50.300 1 228 7.8E-70 T 14-10-2018 GYO_1803 ae71d047a5aa9f64663fad4ee605b8da 39 Pfam PF13790 SR1 protein 1 38 9.7E-21 T 14-10-2018 IPR025236 SR1 protein GYO_3272 3372a1fddf602feba1e7d63420549f9f 244 ProDom PD017229 LIGASE SYNTHASE BIOTIN MAGNESIUM PIMELOYL-COA 6-CARBOXYHEXANOATE--COA BIOSYNTHESIS 6-CARBOXYHEXANOATE-COA BIOW COA 1 210 1.0E-112 T 14-10-2018 IPR005499 6-carboxyhexanoate--CoA ligase GO:0005524|GO:0009102|GO:0042410 KEGG: 00780+6.2.1.14|MetaCyc: PWY-6578 GYO_3272 3372a1fddf602feba1e7d63420549f9f 244 Pfam PF03744 6-carboxyhexanoate--CoA ligase 7 236 1.1E-82 T 14-10-2018 IPR005499 6-carboxyhexanoate--CoA ligase GO:0005524|GO:0009102|GO:0042410 KEGG: 00780+6.2.1.14|MetaCyc: PWY-6578 GYO_3272 3372a1fddf602feba1e7d63420549f9f 244 Hamap MF_00668 6-carboxyhexanoate--CoA ligase [bioW]. 1 237 53.538 T 14-10-2018 IPR005499 6-carboxyhexanoate--CoA ligase GO:0005524|GO:0009102|GO:0042410 KEGG: 00780+6.2.1.14|MetaCyc: PWY-6578 GYO_3272 3372a1fddf602feba1e7d63420549f9f 244 TIGRFAM TIGR01204 bioW: 6-carboxyhexanoate--CoA ligase 6 237 8.4E-119 T 14-10-2018 IPR005499 6-carboxyhexanoate--CoA ligase GO:0005524|GO:0009102|GO:0042410 KEGG: 00780+6.2.1.14|MetaCyc: PWY-6578 GYO_3071 770b2092deaa27a4c893c430633df390 471 TIGRFAM TIGR00170 leuC: 3-isopropylmalate dehydratase, large subunit 1 464 1.4E-274 T 14-10-2018 IPR004430 3-isopropylmalate dehydratase, large subunit GO:0003861|GO:0009098|GO:0051539 KEGG: 00290+4.2.1.33 GYO_3071 770b2092deaa27a4c893c430633df390 471 ProSitePatterns PS00450 Aconitase family signature 1. 338 354 - T 14-10-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 GYO_3071 770b2092deaa27a4c893c430633df390 471 Hamap MF_01026 3-isopropylmalate dehydratase large subunit [leuC]. 1 465 60.114 T 14-10-2018 IPR004430 3-isopropylmalate dehydratase, large subunit GO:0003861|GO:0009098|GO:0051539 KEGG: 00290+4.2.1.33 GYO_3071 770b2092deaa27a4c893c430633df390 471 Pfam PF00330 Aconitase family (aconitate hydratase) 7 456 3.6E-157 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 GYO_3071 770b2092deaa27a4c893c430633df390 471 SUPERFAMILY SSF53732 1 464 1.31E-167 T 14-10-2018 IPR036008 Aconitase, iron-sulfur domain KEGG: 00290+4.2.1.33 GYO_3071 770b2092deaa27a4c893c430633df390 471 Gene3D G3DSA:3.30.499.20 4 285 4.1E-101 T 14-10-2018 GYO_3071 770b2092deaa27a4c893c430633df390 471 PRINTS PR00415 Aconitase family signature 118 131 7.0E-46 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 GYO_3071 770b2092deaa27a4c893c430633df390 471 PRINTS PR00415 Aconitase family signature 194 207 7.0E-46 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 GYO_3071 770b2092deaa27a4c893c430633df390 471 PRINTS PR00415 Aconitase family signature 342 353 7.0E-46 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 GYO_3071 770b2092deaa27a4c893c430633df390 471 PRINTS PR00415 Aconitase family signature 398 411 7.0E-46 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 GYO_3071 770b2092deaa27a4c893c430633df390 471 PRINTS PR00415 Aconitase family signature 208 221 7.0E-46 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 GYO_3071 770b2092deaa27a4c893c430633df390 471 PRINTS PR00415 Aconitase family signature 107 115 7.0E-46 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 GYO_3071 770b2092deaa27a4c893c430633df390 471 PRINTS PR00415 Aconitase family signature 81 94 7.0E-46 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 GYO_3071 770b2092deaa27a4c893c430633df390 471 PRINTS PR00415 Aconitase family signature 132 147 7.0E-46 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 GYO_3071 770b2092deaa27a4c893c430633df390 471 PRINTS PR00415 Aconitase family signature 285 299 7.0E-46 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 GYO_3071 770b2092deaa27a4c893c430633df390 471 Gene3D G3DSA:3.30.499.10 325 471 7.2E-51 T 14-10-2018 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 KEGG: 00290+4.2.1.33 GYO_3778 8a50dded5563573f7777d6da469a669c 451 Pfam PF00144 Beta-lactamase 11 336 2.5E-60 T 14-10-2018 IPR001466 Beta-lactamase-related GYO_3778 8a50dded5563573f7777d6da469a669c 451 SUPERFAMILY SSF56601 5 343 8.45E-79 T 14-10-2018 IPR012338 Beta-lactamase/transpeptidase-like GYO_3778 8a50dded5563573f7777d6da469a669c 451 Gene3D G3DSA:3.40.710.10 19 349 7.7E-85 T 14-10-2018 GYO_3778 8a50dded5563573f7777d6da469a669c 451 Pfam PF11954 Domain of unknown function (DUF3471) 361 439 8.0E-10 T 14-10-2018 IPR021860 Peptidase S12, Pab87-related, C-terminal GYO_0824 1072dde0f5ce44ced96faec553e7ba51 402 TIGRFAM TIGR00710 efflux_Bcr_CflA: drug resistance transporter, Bcr/CflA subfamily 9 394 6.9E-148 T 14-10-2018 IPR004812 Drug resistance transporter Bcr/CmlA subfamily GO:0006855|GO:0015238|GO:0016021 GYO_0824 1072dde0f5ce44ced96faec553e7ba51 402 Pfam PF07690 Major Facilitator Superfamily 19 359 1.1E-43 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 GYO_0824 1072dde0f5ce44ced96faec553e7ba51 402 SUPERFAMILY SSF103473 5 394 1.03E-63 T 14-10-2018 IPR036259 MFS transporter superfamily GYO_0824 1072dde0f5ce44ced96faec553e7ba51 402 Gene3D G3DSA:1.20.1720.10 13 392 6.0E-99 T 14-10-2018 GYO_0070 91b66d1c6b1d3f04594992be324d72d5 86 Gene3D G3DSA:3.10.290.10 1 85 2.7E-25 T 14-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 GYO_0070 91b66d1c6b1d3f04594992be324d72d5 86 SUPERFAMILY SSF55174 1 76 3.01E-20 T 14-10-2018 GYO_0070 91b66d1c6b1d3f04594992be324d72d5 86 PIRSF PIRSF038881 1 86 1.1E-34 T 14-10-2018 IPR025490 RNA-binding protein, HP1423 type GYO_0070 91b66d1c6b1d3f04594992be324d72d5 86 Pfam PF01479 S4 domain 1 47 1.3E-10 T 14-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 GYO_0070 91b66d1c6b1d3f04594992be324d72d5 86 SMART SM00363 1 63 1.2E-8 T 14-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 GYO_1039 6e1af42e57d024197e2ce2bb10ec9248 136 Pfam PF09350 Domain of unknown function (DUF1992) 15 78 5.8E-21 T 14-10-2018 IPR018961 DnaJ homologue, subfamily C, member 28, conserved domain GYO_1556 48e52aa9904a7b546ef006b942be33c5 317 SUPERFAMILY SSF47090 244 313 2.88E-16 T 14-10-2018 IPR036365 PGBD-like superfamily GYO_1556 48e52aa9904a7b546ef006b942be33c5 317 Pfam PF01471 Putative peptidoglycan binding domain 252 312 1.1E-16 T 14-10-2018 IPR002477 Peptidoglycan binding-like GYO_1556 48e52aa9904a7b546ef006b942be33c5 317 Pfam PF01510 N-acetylmuramoyl-L-alanine amidase 24 142 2.2E-18 T 14-10-2018 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 Reactome: R-HSA-6803157 GYO_1556 48e52aa9904a7b546ef006b942be33c5 317 Gene3D G3DSA:3.40.80.10 3 167 3.7E-49 T 14-10-2018 IPR036505 N-acetylmuramoyl-L-alanine amidase/PGRP domain superfamily GO:0008745|GO:0009253 Reactome: R-HSA-6803157 GYO_1556 48e52aa9904a7b546ef006b942be33c5 317 Gene3D G3DSA:3.10.350.10 172 236 8.9E-18 T 14-10-2018 IPR036779 LysM domain superfamily GYO_1556 48e52aa9904a7b546ef006b942be33c5 317 SMART SM00257 178 222 1.0E-17 T 14-10-2018 IPR018392 LysM domain GYO_1556 48e52aa9904a7b546ef006b942be33c5 317 SUPERFAMILY SSF54106 178 221 1.83E-10 T 14-10-2018 GYO_1556 48e52aa9904a7b546ef006b942be33c5 317 Pfam PF01476 LysM domain 179 221 7.8E-16 T 14-10-2018 IPR018392 LysM domain GYO_1556 48e52aa9904a7b546ef006b942be33c5 317 SUPERFAMILY SSF55846 13 158 7.2E-46 T 14-10-2018 IPR036505 N-acetylmuramoyl-L-alanine amidase/PGRP domain superfamily GO:0008745|GO:0009253 Reactome: R-HSA-6803157 GYO_1556 48e52aa9904a7b546ef006b942be33c5 317 SMART SM00644 15 153 1.1E-41 T 14-10-2018 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 Reactome: R-HSA-6803157 GYO_1556 48e52aa9904a7b546ef006b942be33c5 317 Gene3D G3DSA:1.10.101.10 242 316 3.2E-19 T 14-10-2018 IPR036366 PGBD superfamily Reactome: R-HSA-1442490|Reactome: R-HSA-1474228 GYO_0854 716fb0a3a439b0358ac817af22682f69 158 SUPERFAMILY SSF52540 26 121 2.27E-20 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase GYO_0854 716fb0a3a439b0358ac817af22682f69 158 Pfam PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE 10 133 4.4E-38 T 14-10-2018 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE GO:0002949 GYO_0854 716fb0a3a439b0358ac817af22682f69 158 Gene3D G3DSA:3.40.50.300 2 152 1.5E-42 T 14-10-2018 GYO_0854 716fb0a3a439b0358ac817af22682f69 158 TIGRFAM TIGR00150 T6A_YjeE: tRNA threonylcarbamoyl adenosine modification protein YjeE 10 139 1.0E-51 T 14-10-2018 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE GO:0002949 GYO_0380 3f0b0e3d6dc7919cf6398b2b5b688e63 124 Pfam PF10057 Uncharacterized conserved protein (DUF2294) 5 112 5.7E-38 T 14-10-2018 IPR018745 Domain of unknown function DUF2294 GYO_0402 9c0ebbba4ddfa5bd8119e58cea71b8fc 542 TIGRFAM TIGR00704 NaPi_cotrn_rel: Na/Pi-cotransporter II-related protein 8 316 1.0E-74 T 14-10-2018 IPR004633 Na/Pi-cotransporter II-related/YqeW-like protein GO:0016020 GYO_0402 9c0ebbba4ddfa5bd8119e58cea71b8fc 542 Pfam PF01895 PhoU domain 452 536 1.3E-19 T 14-10-2018 IPR026022 PhoU domain GYO_0402 9c0ebbba4ddfa5bd8119e58cea71b8fc 542 Pfam PF01895 PhoU domain 348 433 4.8E-11 T 14-10-2018 IPR026022 PhoU domain GYO_0402 9c0ebbba4ddfa5bd8119e58cea71b8fc 542 SUPERFAMILY SSF109755 334 538 7.85E-53 T 14-10-2018 GYO_0402 9c0ebbba4ddfa5bd8119e58cea71b8fc 542 Gene3D G3DSA:1.20.58.220 444 541 1.9E-24 T 14-10-2018 IPR038078 PhoU-like domain superfamily GYO_0402 9c0ebbba4ddfa5bd8119e58cea71b8fc 542 Pfam PF02690 Na+/Pi-cotransporter 18 153 1.3E-50 T 14-10-2018 IPR003841 Sodium-dependent phosphate transport protein GO:0015321|GO:0016020|GO:0044341 Reactome: R-HSA-427589 GYO_0402 9c0ebbba4ddfa5bd8119e58cea71b8fc 542 Pfam PF02690 Na+/Pi-cotransporter 145 257 1.6E-17 T 14-10-2018 IPR003841 Sodium-dependent phosphate transport protein GO:0015321|GO:0016020|GO:0044341 Reactome: R-HSA-427589 GYO_0402 9c0ebbba4ddfa5bd8119e58cea71b8fc 542 Gene3D G3DSA:1.20.58.220 341 442 6.4E-15 T 14-10-2018 IPR038078 PhoU-like domain superfamily GYO_0662 55a51783541561c00222a09e0e0ed52a 273 SUPERFAMILY SSF47240 1 271 6.84E-99 T 14-10-2018 IPR009078 Ferritin-like superfamily GYO_0662 55a51783541561c00222a09e0e0ed52a 273 Gene3D G3DSA:3.30.1530.10 206 269 2.3E-30 T 14-10-2018 IPR027407 Manganese catalase, C-terminal GYO_0662 55a51783541561c00222a09e0e0ed52a 273 Gene3D G3DSA:1.20.1260.10 1 198 1.4E-75 T 14-10-2018 IPR012347 Ferritin-like GYO_0662 55a51783541561c00222a09e0e0ed52a 273 Pfam PF05067 Manganese containing catalase 1 268 1.8E-133 T 14-10-2018 IPR007760 Manganese catalase GYO_2876 b6465d5ee580959ee215b913770a3bc8 399 Gene3D G3DSA:3.50.50.60 9 325 6.3E-101 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily GYO_2876 b6465d5ee580959ee215b913770a3bc8 399 SUPERFAMILY SSF51905 121 261 8.29E-25 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily GYO_2876 b6465d5ee580959ee215b913770a3bc8 399 SUPERFAMILY SSF51905 7 154 7.5E-25 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily GYO_2876 b6465d5ee580959ee215b913770a3bc8 399 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 7 125 2.2E-9 T 14-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 GYO_2876 b6465d5ee580959ee215b913770a3bc8 399 Gene3D G3DSA:3.50.50.60 123 261 6.3E-101 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily GYO_2409 fe74988606b4c0fe0dfd43e70103cf63 144 Gene3D G3DSA:3.40.30.10 25 144 2.2E-57 T 14-10-2018 GYO_2409 fe74988606b4c0fe0dfd43e70103cf63 144 TIGRFAM TIGR04191 YphP_YqiW: putative bacilliredoxin, YphP/YqiW family 8 144 1.5E-66 T 14-10-2018 IPR009474 Putative bacilliredoxin, YphP/YqiW family GYO_2409 fe74988606b4c0fe0dfd43e70103cf63 144 Pfam PF06491 Disulphide isomerase 8 144 3.5E-63 T 14-10-2018 IPR009474 Putative bacilliredoxin, YphP/YqiW family GYO_1501 e666018ee453b9442fd9dffbf9feaa44 387 Gene3D G3DSA:1.25.40.10 157 387 4.4E-66 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 GYO_1501 e666018ee453b9442fd9dffbf9feaa44 387 Gene3D G3DSA:1.25.40.10 2 156 9.7E-43 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 GYO_1501 e666018ee453b9442fd9dffbf9feaa44 387 SUPERFAMILY SSF48452 207 376 2.02E-13 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 GYO_1501 e666018ee453b9442fd9dffbf9feaa44 387 SMART SM00028 270 303 3.3 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 GYO_1501 e666018ee453b9442fd9dffbf9feaa44 387 SMART SM00028 144 177 280.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 GYO_1501 e666018ee453b9442fd9dffbf9feaa44 387 SMART SM00028 231 264 0.021 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 GYO_1501 e666018ee453b9442fd9dffbf9feaa44 387 SMART SM00028 344 377 500.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 GYO_1427 9a7e8b73fb36e89eaec9afb3cc7fe9a4 353 SMART SM01097 1 130 6.4E-76 T 14-10-2018 IPR002474 Carbamoyl-phosphate synthase small subunit, N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 GYO_1427 9a7e8b73fb36e89eaec9afb3cc7fe9a4 353 PRINTS PR00096 Glutamine amidotransferase superfamily signature 232 243 8.5E-12 T 14-10-2018 GYO_1427 9a7e8b73fb36e89eaec9afb3cc7fe9a4 353 PRINTS PR00096 Glutamine amidotransferase superfamily signature 205 214 8.5E-12 T 14-10-2018 GYO_1427 9a7e8b73fb36e89eaec9afb3cc7fe9a4 353 PRINTS PR00096 Glutamine amidotransferase superfamily signature 318 331 8.5E-12 T 14-10-2018 GYO_1427 9a7e8b73fb36e89eaec9afb3cc7fe9a4 353 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 202 216 6.4E-33 T 14-10-2018 GYO_1427 9a7e8b73fb36e89eaec9afb3cc7fe9a4 353 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 232 248 6.4E-33 T 14-10-2018 GYO_1427 9a7e8b73fb36e89eaec9afb3cc7fe9a4 353 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 164 178 6.4E-33 T 14-10-2018 GYO_1427 9a7e8b73fb36e89eaec9afb3cc7fe9a4 353 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 274 285 6.4E-33 T 14-10-2018 GYO_1427 9a7e8b73fb36e89eaec9afb3cc7fe9a4 353 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 249 266 6.4E-33 T 14-10-2018 GYO_1427 9a7e8b73fb36e89eaec9afb3cc7fe9a4 353 Gene3D G3DSA:3.40.50.880 163 341 1.9E-34 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like GYO_1427 9a7e8b73fb36e89eaec9afb3cc7fe9a4 353 SUPERFAMILY SSF52021 1 136 8.24E-51 T 14-10-2018 IPR036480 Carbamoyl-phosphate synthase small subunit, N-terminal domain superfamily KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 GYO_1427 9a7e8b73fb36e89eaec9afb3cc7fe9a4 353 Gene3D G3DSA:3.50.30.20 1 145 1.6E-53 T 14-10-2018 IPR036480 Carbamoyl-phosphate synthase small subunit, N-terminal domain superfamily KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 GYO_1427 9a7e8b73fb36e89eaec9afb3cc7fe9a4 353 Pfam PF00117 Glutamine amidotransferase class-I 166 341 7.4E-47 T 14-10-2018 IPR017926 Glutamine amidotransferase GYO_1427 9a7e8b73fb36e89eaec9afb3cc7fe9a4 353 TIGRFAM TIGR01368 CPSaseIIsmall: carbamoyl-phosphate synthase, small subunit 4 343 3.7E-142 T 14-10-2018 IPR006274 Carbamoyl-phosphate synthase, small subunit GO:0004088|GO:0006207|GO:0006541 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 GYO_1427 9a7e8b73fb36e89eaec9afb3cc7fe9a4 353 Hamap MF_01209 Carbamoyl-phosphate synthase small chain [carA]. 1 347 43.891 T 14-10-2018 IPR006274 Carbamoyl-phosphate synthase, small subunit GO:0004088|GO:0006207|GO:0006541 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 GYO_1427 9a7e8b73fb36e89eaec9afb3cc7fe9a4 353 SUPERFAMILY SSF52317 141 344 4.22E-53 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like GYO_1427 9a7e8b73fb36e89eaec9afb3cc7fe9a4 353 Pfam PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain 3 128 4.5E-50 T 14-10-2018 IPR002474 Carbamoyl-phosphate synthase small subunit, N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 GYO_1427 9a7e8b73fb36e89eaec9afb3cc7fe9a4 353 PRINTS PR00097 Anthranilate synthase component II signature 205 214 2.0E-7 T 14-10-2018 GYO_1427 9a7e8b73fb36e89eaec9afb3cc7fe9a4 353 PRINTS PR00097 Anthranilate synthase component II signature 232 243 2.0E-7 T 14-10-2018 GYO_1427 9a7e8b73fb36e89eaec9afb3cc7fe9a4 353 PRINTS PR00097 Anthranilate synthase component II signature 318 331 2.0E-7 T 14-10-2018 GYO_1993 c1f20511c4bfbb53db80133ec00a4a0c 360 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 213 231 4.4E-44 T 14-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 GYO_1993 c1f20511c4bfbb53db80133ec00a4a0c 360 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 307 328 4.4E-44 T 14-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 GYO_1993 c1f20511c4bfbb53db80133ec00a4a0c 360 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 277 292 4.4E-44 T 14-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 GYO_1993 c1f20511c4bfbb53db80133ec00a4a0c 360 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 233 250 4.4E-44 T 14-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 GYO_1993 c1f20511c4bfbb53db80133ec00a4a0c 360 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 15 37 4.4E-44 T 14-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 GYO_1993 c1f20511c4bfbb53db80133ec00a4a0c 360 TIGRFAM TIGR00328 flhB: flagellar biosynthetic protein FlhB 13 358 5.3E-137 T 14-10-2018 IPR006136 Flagellar biosynthetic protein FlhB GO:0015031|GO:0016021|GO:0044780 GYO_1993 c1f20511c4bfbb53db80133ec00a4a0c 360 Gene3D G3DSA:3.40.1690.10 223 360 4.2E-57 T 14-10-2018 IPR029025 Type III secretion system substrate exporter, C-terminal GYO_1993 c1f20511c4bfbb53db80133ec00a4a0c 360 SUPERFAMILY SSF160544 249 356 8.5E-43 T 14-10-2018 IPR029025 Type III secretion system substrate exporter, C-terminal GYO_1993 c1f20511c4bfbb53db80133ec00a4a0c 360 Pfam PF01312 FlhB HrpN YscU SpaS Family 12 352 1.7E-133 T 14-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 GYO_0604 94ca4b63e9f2a3c67e6f49648c229453 104 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 50 65 2.2E-12 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 GYO_0604 94ca4b63e9f2a3c67e6f49648c229453 104 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 65 80 2.2E-12 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 GYO_0604 94ca4b63e9f2a3c67e6f49648c229453 104 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 18 33 2.2E-12 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 GYO_0604 94ca4b63e9f2a3c67e6f49648c229453 104 SUPERFAMILY SSF46785 4 94 8.81E-19 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily GYO_0604 94ca4b63e9f2a3c67e6f49648c229453 104 Pfam PF01022 Bacterial regulatory protein, arsR family 23 67 7.6E-13 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 GYO_0604 94ca4b63e9f2a3c67e6f49648c229453 104 Gene3D G3DSA:1.10.10.10 5 102 3.4E-20 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily GYO_0604 94ca4b63e9f2a3c67e6f49648c229453 104 SMART SM00418 16 94 5.3E-23 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 GYO_0831 c19075e1c555e5083527caaff0fbb7a9 250 Pfam PF11611 Domain of unknown function (DUF4352) 98 204 2.4E-6 T 14-10-2018 IPR029051 Domain of unknown function DUF4352 GYO_0831 c19075e1c555e5083527caaff0fbb7a9 250 Gene3D G3DSA:2.60.40.1240 98 239 9.5E-6 T 14-10-2018 IPR029050 Immunoprotective extracellular, immunoglobulin-like domain superfamily GYO_2408 6d03a0ab19d34eceb00766fb62cc071a 261 SUPERFAMILY SSF53335 1 254 8.86E-55 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase GYO_2408 6d03a0ab19d34eceb00766fb62cc071a 261 Gene3D G3DSA:3.40.50.150 66 253 3.1E-41 T 14-10-2018 GYO_2408 6d03a0ab19d34eceb00766fb62cc071a 261 Pfam PF04445 Putative SAM-dependent methyltransferase 42 225 1.0E-14 T 14-10-2018 IPR007536 Ribosomal RNA small subunit methyltransferase J GO:0008990|GO:0031167 GYO_0688 ef3acdda71948c8eff517280ec962fdf 273 Gene3D G3DSA:1.10.490.10 1 135 2.5E-63 T 14-10-2018 IPR012292 Globin/Protoglobin GO:0019825|GO:0020037 GYO_0688 ef3acdda71948c8eff517280ec962fdf 273 Pfam PF08678 Rsbr N terminal 10 135 4.8E-39 T 14-10-2018 IPR014792 RsbS co-antagonist protein RsbRA N-terminal domain GYO_0688 ef3acdda71948c8eff517280ec962fdf 273 ProDom PD936484 POLYPROTEIN GLYCOPROTEIN M G2 TRANSMEMBRANE NONSTRUCTURAL MEMBRANE CONTAINS: PRECURSOR SIGNAL 9 134 4.0E-67 T 14-10-2018 GYO_0688 ef3acdda71948c8eff517280ec962fdf 273 Pfam PF01740 STAS domain 154 255 2.1E-14 T 14-10-2018 IPR002645 STAS domain GYO_0688 ef3acdda71948c8eff517280ec962fdf 273 SUPERFAMILY SSF52091 149 243 3.92E-16 T 14-10-2018 IPR036513 STAS domain superfamily GYO_0688 ef3acdda71948c8eff517280ec962fdf 273 Gene3D G3DSA:3.30.750.24 147 267 1.6E-38 T 14-10-2018 IPR036513 STAS domain superfamily GYO_1999 0d7365abe3dac302198c33c79aaa6f44 156 SUPERFAMILY SSF50341 10 145 5.75E-35 T 14-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 GYO_1999 0d7365abe3dac302198c33c79aaa6f44 156 SMART SM00260 6 143 2.6E-41 T 14-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 GYO_1999 0d7365abe3dac302198c33c79aaa6f44 156 Gene3D G3DSA:2.40.50.180 29 138 3.1E-37 T 14-10-2018 GYO_1999 0d7365abe3dac302198c33c79aaa6f44 156 Pfam PF01584 CheW-like domain 11 145 2.5E-32 T 14-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 GYO_1999 0d7365abe3dac302198c33c79aaa6f44 156 Gene3D G3DSA:2.30.30.40 12 137 3.1E-37 T 14-10-2018 GYO_3960 4a91c5c19948373bd1e2426739257ed4 570 TIGRFAM TIGR02418 acolac_catab: acetolactate synthase, catabolic 16 553 5.5E-285 T 14-10-2018 IPR012782 Acetolactate synthase, catabolic GO:0000287|GO:0003984|GO:0030976|GO:0034077 KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111 GYO_3960 4a91c5c19948373bd1e2426739257ed4 570 SUPERFAMILY SSF52518 13 182 1.72E-49 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold GYO_3960 4a91c5c19948373bd1e2426739257ed4 570 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 396 542 1.6E-44 T 14-10-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 GYO_3960 4a91c5c19948373bd1e2426739257ed4 570 SUPERFAMILY SSF52518 373 550 1.05E-57 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold GYO_3960 4a91c5c19948373bd1e2426739257ed4 570 Gene3D G3DSA:3.40.50.970 1 191 6.7E-74 T 14-10-2018 GYO_3960 4a91c5c19948373bd1e2426739257ed4 570 Gene3D G3DSA:3.40.50.970 367 570 1.5E-65 T 14-10-2018 GYO_3960 4a91c5c19948373bd1e2426739257ed4 570 Gene3D G3DSA:3.40.50.1220 192 366 3.5E-40 T 14-10-2018 GYO_3960 4a91c5c19948373bd1e2426739257ed4 570 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 200 333 4.6E-25 T 14-10-2018 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 GYO_3960 4a91c5c19948373bd1e2426739257ed4 570 ProSitePatterns PS00187 Thiamine pyrophosphate enzymes signature. 433 452 - T 14-10-2018 IPR000399 TPP-binding enzyme, conserved site GO:0000287|GO:0030976 GYO_3960 4a91c5c19948373bd1e2426739257ed4 570 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 15 179 1.6E-52 T 14-10-2018 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 GYO_3960 4a91c5c19948373bd1e2426739257ed4 570 SUPERFAMILY SSF52467 194 359 7.05E-33 T 14-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily GYO_3635 646748445e96fe5949e8d24b76664456 409 Pfam PF12704 MacB-like periplasmic core domain 19 242 2.3E-31 T 14-10-2018 IPR025857 MacB-like periplasmic core domain GYO_3635 646748445e96fe5949e8d24b76664456 409 Pfam PF02687 FtsX-like permease family 315 402 5.7E-12 T 14-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 GYO_2123 d09289acdf3d7725a2daf4b2a5658e4d 154 Pfam PF10903 Protein of unknown function (DUF2691) 2 152 5.8E-63 T 14-10-2018 IPR020216 Uncharacterised protein family, YncE GYO_2123 d09289acdf3d7725a2daf4b2a5658e4d 154 ProDom PD091678 YNCE 3 153 3.0E-68 T 14-10-2018 IPR020216 Uncharacterised protein family, YncE GYO_3333 bdab814bb8a742c43c89ef7bbd39b09f 486 Gene3D G3DSA:3.30.300.310 387 484 7.2E-32 T 14-10-2018 GYO_3333 bdab814bb8a742c43c89ef7bbd39b09f 486 Hamap MF_00731 2-succinylbenzoate--CoA ligase [menE]. 5 480 49.454 T 14-10-2018 IPR010192 2-succinylbenzoate--CoA ligase GO:0005524|GO:0008756|GO:0009234 KEGG: 00130+6.2.1.26|MetaCyc: PWY-5837 GYO_3333 bdab814bb8a742c43c89ef7bbd39b09f 486 Pfam PF00501 AMP-binding enzyme 11 389 6.5E-94 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 GYO_3333 bdab814bb8a742c43c89ef7bbd39b09f 486 ProSitePatterns PS00455 Putative AMP-binding domain signature. 149 160 - T 14-10-2018 IPR020845 AMP-binding, conserved site GYO_3333 bdab814bb8a742c43c89ef7bbd39b09f 486 TIGRFAM TIGR01923 menE: O-succinylbenzoate-CoA ligase 30 477 7.7E-191 T 14-10-2018 IPR010192 2-succinylbenzoate--CoA ligase GO:0005524|GO:0008756|GO:0009234 KEGG: 00130+6.2.1.26|MetaCyc: PWY-5837 GYO_3333 bdab814bb8a742c43c89ef7bbd39b09f 486 SUPERFAMILY SSF56801 6 481 3.01E-141 T 14-10-2018 GYO_3333 bdab814bb8a742c43c89ef7bbd39b09f 486 Pfam PF13193 AMP-binding enzyme C-terminal domain 398 471 1.3E-19 T 14-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain GYO_3333 bdab814bb8a742c43c89ef7bbd39b09f 486 Gene3D G3DSA:3.40.50.12780 1 386 1.1E-155 T 14-10-2018 GYO_0163 03cfc766603ebf9aa13b0044970622a2 217 TIGRFAM TIGR01351 adk: adenylate kinase 2 212 6.9E-83 T 14-10-2018 IPR006259 Adenylate kinase subfamily GO:0004017|GO:0005524|GO:0016776 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219 GYO_0163 03cfc766603ebf9aa13b0044970622a2 217 Pfam PF00406 Adenylate kinase 5 190 5.6E-63 T 14-10-2018 GYO_0163 03cfc766603ebf9aa13b0044970622a2 217 Gene3D G3DSA:3.40.50.300 1 214 2.4E-86 T 14-10-2018 GYO_0163 03cfc766603ebf9aa13b0044970622a2 217 Hamap MF_00235 Adenylate kinase [adk]. 1 213 54.96 T 14-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 GYO_0163 03cfc766603ebf9aa13b0044970622a2 217 PRINTS PR00094 Adenylate kinase signature 160 175 2.5E-34 T 14-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 GYO_0163 03cfc766603ebf9aa13b0044970622a2 217 PRINTS PR00094 Adenylate kinase signature 4 17 2.5E-34 T 14-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 GYO_0163 03cfc766603ebf9aa13b0044970622a2 217 PRINTS PR00094 Adenylate kinase signature 32 46 2.5E-34 T 14-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 GYO_0163 03cfc766603ebf9aa13b0044970622a2 217 PRINTS PR00094 Adenylate kinase signature 81 97 2.5E-34 T 14-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 GYO_0163 03cfc766603ebf9aa13b0044970622a2 217 PRINTS PR00094 Adenylate kinase signature 177 191 2.5E-34 T 14-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 GYO_0163 03cfc766603ebf9aa13b0044970622a2 217 SUPERFAMILY SSF52540 1 213 4.91E-45 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase GYO_0163 03cfc766603ebf9aa13b0044970622a2 217 ProSitePatterns PS00113 Adenylate kinase signature. 81 92 - T 14-10-2018 IPR033690 Adenylate kinase, conserved site KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 GYO_0163 03cfc766603ebf9aa13b0044970622a2 217 Pfam PF05191 Adenylate kinase, active site lid 127 162 5.0E-17 T 14-10-2018 IPR007862 Adenylate kinase, active site lid domain GO:0004017 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219 GYO_2724 7ce01f48987bc93d2d7c7e7fb747b020 253 TIGRFAM TIGR04087 YqxM_for_SipW: YqxM protein 3 192 4.9E-77 T 14-10-2018 IPR023848 TasA anchoring/assembly protein GO:0062039 GYO_2724 7ce01f48987bc93d2d7c7e7fb747b020 253 TIGRFAM TIGR04088 cognate_SipW: SipW-cognate class signal peptide 29 59 4.8E-7 T 14-10-2018 IPR023833 Signal peptide, camelysin GYO_2795 675adf4d579963361a5155023e71e0db 136 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 53 93 - T 14-10-2018 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 GYO_2795 675adf4d579963361a5155023e71e0db 136 TIGRFAM TIGR01354 cyt_deam_tetra: cytidine deaminase 5 129 6.0E-47 T 14-10-2018 IPR006262 Cytidine deaminase, homotetrameric GO:0004126|GO:0008270|GO:0009972 KEGG: 00240+3.5.4.5|KEGG: 00983+3.5.4.5|MetaCyc: PWY-6556|MetaCyc: PWY-7181|MetaCyc: PWY-7193|MetaCyc: PWY-7199|Reactome: R-HSA-6798695|Reactome: R-HSA-73614 GYO_2795 675adf4d579963361a5155023e71e0db 136 Gene3D G3DSA:3.40.140.10 1 136 4.9E-61 T 14-10-2018 GYO_2795 675adf4d579963361a5155023e71e0db 136 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 3 104 5.8E-19 T 14-10-2018 IPR002125 Cytidine and deoxycytidylate deaminase domain GYO_2795 675adf4d579963361a5155023e71e0db 136 SUPERFAMILY SSF53927 2 130 7.29E-49 T 14-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 GYO_0146 fd02bed66e57f388446018d8e4208570 277 SMART SM01382 124 253 5.3E-93 T 14-10-2018 IPR022669 Ribosomal protein L2, C-terminal GO:0003735|GO:0005840|GO:0006412 GYO_0146 fd02bed66e57f388446018d8e4208570 277 SMART SM01383 42 118 3.1E-45 T 14-10-2018 IPR002171 Ribosomal protein L2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 GYO_0146 fd02bed66e57f388446018d8e4208570 277 Hamap MF_01320_B 50S ribosomal protein L2 [rplB]. 1 275 49.879 T 14-10-2018 IPR005880 Ribosomal protein L2, bacterial/organellar-type GO:0003723|GO:0003735|GO:0006412|GO:0015934|GO:0016740 GYO_0146 fd02bed66e57f388446018d8e4208570 277 Pfam PF00181 Ribosomal Proteins L2, RNA binding domain 42 117 4.5E-33 T 14-10-2018 IPR022666 Ribosomal Proteins L2, RNA binding domain GO:0003735|GO:0005622|GO:0005840|GO:0006412 GYO_0146 fd02bed66e57f388446018d8e4208570 277 Pfam PF03947 Ribosomal Proteins L2, C-terminal domain 125 251 2.8E-57 T 14-10-2018 IPR022669 Ribosomal protein L2, C-terminal GO:0003735|GO:0005840|GO:0006412 GYO_0146 fd02bed66e57f388446018d8e4208570 277 TIGRFAM TIGR01171 rplB_bact: ribosomal protein uL2 3 275 1.3E-141 T 14-10-2018 IPR005880 Ribosomal protein L2, bacterial/organellar-type GO:0003723|GO:0003735|GO:0006412|GO:0015934|GO:0016740 GYO_0146 fd02bed66e57f388446018d8e4208570 277 PIRSF PIRSF002158 3 276 1.5E-99 T 14-10-2018 IPR002171 Ribosomal protein L2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 GYO_0146 fd02bed66e57f388446018d8e4208570 277 Gene3D G3DSA:2.30.30.30 118 196 8.5E-35 T 14-10-2018 IPR014722 Ribosomal protein L2, domain 2 GYO_0146 fd02bed66e57f388446018d8e4208570 277 SUPERFAMILY SSF50249 2 125 2.06E-51 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold GYO_0146 fd02bed66e57f388446018d8e4208570 277 Gene3D G3DSA:4.10.950.10 197 276 4.2E-36 T 14-10-2018 IPR014726 Ribosomal protein L2, domain 3 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 GYO_0146 fd02bed66e57f388446018d8e4208570 277 Gene3D G3DSA:2.40.50.140 1 114 7.4E-49 T 14-10-2018 GYO_0146 fd02bed66e57f388446018d8e4208570 277 SUPERFAMILY SSF50104 126 273 3.07E-61 T 14-10-2018 IPR008991 Translation protein SH3-like domain superfamily GYO_0146 fd02bed66e57f388446018d8e4208570 277 ProSitePatterns PS00467 Ribosomal protein L2 signature. 218 229 - T 14-10-2018 IPR022671 Ribosomal protein L2, conserved site GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 GYO_0788 063e5dd97f1c125e9f4f05e7ec77576d 314 Gene3D G3DSA:3.10.180.10 7 303 4.2E-124 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase GYO_0788 063e5dd97f1c125e9f4f05e7ec77576d 314 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 7 266 2.5E-37 T 14-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain GYO_0788 063e5dd97f1c125e9f4f05e7ec77576d 314 SUPERFAMILY SSF54593 4 281 4.77E-49 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase GYO_0788 063e5dd97f1c125e9f4f05e7ec77576d 314 Gene3D G3DSA:3.10.180.10 67 210 4.2E-124 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase GYO_3164 b0355e0db33a35d7849bf8cbc8a62d7c 312 Gene3D G3DSA:3.40.50.720 1 149 1.3E-60 T 14-10-2018 GYO_3164 b0355e0db33a35d7849bf8cbc8a62d7c 312 Pfam PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain 151 309 4.2E-28 T 14-10-2018 IPR022383 Lactate/malate dehydrogenase, C-terminal GO:0016616|GO:0055114 GYO_3164 b0355e0db33a35d7849bf8cbc8a62d7c 312 SUPERFAMILY SSF51735 4 147 2.52E-48 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily GYO_3164 b0355e0db33a35d7849bf8cbc8a62d7c 312 SUPERFAMILY SSF56327 151 309 6.34E-54 T 14-10-2018 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 GYO_3164 b0355e0db33a35d7849bf8cbc8a62d7c 312 Pfam PF00056 lactate/malate dehydrogenase, NAD binding domain 7 147 6.8E-42 T 14-10-2018 IPR001236 Lactate/malate dehydrogenase, N-terminal GO:0016491|GO:0055114 GYO_3164 b0355e0db33a35d7849bf8cbc8a62d7c 312 PIRSF PIRSF000102 3 311 2.2E-104 T 14-10-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 GYO_3164 b0355e0db33a35d7849bf8cbc8a62d7c 312 PRINTS PR00086 L-lactate dehydrogenase signature 175 188 3.1E-32 T 14-10-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 GYO_3164 b0355e0db33a35d7849bf8cbc8a62d7c 312 PRINTS PR00086 L-lactate dehydrogenase signature 121 141 3.1E-32 T 14-10-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 GYO_3164 b0355e0db33a35d7849bf8cbc8a62d7c 312 PRINTS PR00086 L-lactate dehydrogenase signature 33 57 3.1E-32 T 14-10-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 GYO_3164 b0355e0db33a35d7849bf8cbc8a62d7c 312 PRINTS PR00086 L-lactate dehydrogenase signature 7 31 3.1E-32 T 14-10-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 GYO_3164 b0355e0db33a35d7849bf8cbc8a62d7c 312 PRINTS PR00086 L-lactate dehydrogenase signature 145 163 3.1E-32 T 14-10-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 GYO_3164 b0355e0db33a35d7849bf8cbc8a62d7c 312 Hamap MF_00487 Malate dehydrogenase [mdh]. 6 312 47.213 T 14-10-2018 IPR011275 Malate dehydrogenase, type 3 GO:0016616|GO:0055114 KEGG: 00020+1.1.1.37|KEGG: 00270+1.1.1.37|KEGG: 00620+1.1.1.37|KEGG: 00630+1.1.1.37|KEGG: 00680+1.1.1.37|KEGG: 00710+1.1.1.37|KEGG: 00720+1.1.1.37|MetaCyc: PWY-1622|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7115|MetaCyc: PWY-7383 GYO_3164 b0355e0db33a35d7849bf8cbc8a62d7c 312 TIGRFAM TIGR01763 MalateDH_bact: malate dehydrogenase, NAD-dependent 5 311 1.6E-175 T 14-10-2018 IPR011275 Malate dehydrogenase, type 3 GO:0016616|GO:0055114 KEGG: 00020+1.1.1.37|KEGG: 00270+1.1.1.37|KEGG: 00620+1.1.1.37|KEGG: 00630+1.1.1.37|KEGG: 00680+1.1.1.37|KEGG: 00710+1.1.1.37|KEGG: 00720+1.1.1.37|MetaCyc: PWY-1622|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7115|MetaCyc: PWY-7383 GYO_3164 b0355e0db33a35d7849bf8cbc8a62d7c 312 Gene3D G3DSA:3.90.110.10 150 310 1.8E-61 T 14-10-2018 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 GYO_0890 56cc0cbd840197ea0c7f6a7af4f111ac 468 ProSitePatterns PS00218 Amino acid permeases signature. 41 71 - T 14-10-2018 IPR004840 Amino acid permease, conserved site GO:0006865|GO:0016021|GO:0055085 GYO_0890 56cc0cbd840197ea0c7f6a7af4f111ac 468 Gene3D G3DSA:1.20.1740.10 7 464 1.7E-74 T 14-10-2018 GYO_0890 56cc0cbd840197ea0c7f6a7af4f111ac 468 TIGRFAM TIGR01773 GABAperm: GABA permease 1 450 1.7E-243 T 14-10-2018 IPR011265 GABA permease GO:0015185|GO:0015812|GO:0016021 GYO_0890 56cc0cbd840197ea0c7f6a7af4f111ac 468 Pfam PF00324 Amino acid permease 16 454 2.1E-132 T 14-10-2018 IPR004841 Amino acid permease/ SLC12A domain GO:0016020|GO:0055085 GYO_0890 56cc0cbd840197ea0c7f6a7af4f111ac 468 PIRSF PIRSF006060 1 465 3.1E-79 T 14-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 GYO_4258 9b204c903e3f3bc189012c91b03ae99c 110 PIRSF PIRSF000699 1 107 3.8E-41 T 14-10-2018 IPR003188 Phosphotransferase system, lactose/cellobiose-type IIA subunit GO:0009401 GYO_4258 9b204c903e3f3bc189012c91b03ae99c 110 TIGRFAM TIGR00823 EIIA-LAC: PTS system, lactose-specific IIa component 3 101 6.6E-44 T 14-10-2018 IPR003188 Phosphotransferase system, lactose/cellobiose-type IIA subunit GO:0009401 GYO_4258 9b204c903e3f3bc189012c91b03ae99c 110 Pfam PF02255 PTS system, Lactose/Cellobiose specific IIA subunit 7 100 3.2E-39 T 14-10-2018 IPR003188 Phosphotransferase system, lactose/cellobiose-type IIA subunit GO:0009401 GYO_4258 9b204c903e3f3bc189012c91b03ae99c 110 SUPERFAMILY SSF46973 3 101 6.28E-39 T 14-10-2018 IPR036542 Phosphotransferase system, lactose/cellobiose-type IIA subunit superfamily GO:0009401 GYO_4258 9b204c903e3f3bc189012c91b03ae99c 110 Gene3D G3DSA:1.20.58.280 1 106 4.7E-42 T 14-10-2018 GYO_3017 8a0394df558fb0ca968138605527a280 435 Pfam PF07690 Major Facilitator Superfamily 41 294 4.2E-20 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 GYO_3017 8a0394df558fb0ca968138605527a280 435 Gene3D G3DSA:1.20.1250.20 16 208 4.8E-13 T 14-10-2018 GYO_3017 8a0394df558fb0ca968138605527a280 435 SUPERFAMILY SSF103473 20 406 1.83E-47 T 14-10-2018 IPR036259 MFS transporter superfamily GYO_3017 8a0394df558fb0ca968138605527a280 435 TIGRFAM TIGR00897 2A0118: polyol permease 7 407 1.2E-214 T 14-10-2018 IPR004748 Polyol permease GO:0016021|GO:0022857|GO:0055085 GYO_3017 8a0394df558fb0ca968138605527a280 435 Gene3D G3DSA:1.20.1250.20 219 413 2.4E-21 T 14-10-2018 GYO_0669 b1308ac98c77c6069cf53cf03360a0f8 308 SUPERFAMILY SSF52540 3 217 3.4E-59 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase GYO_0669 b1308ac98c77c6069cf53cf03360a0f8 308 SMART SM00382 30 211 1.8E-16 T 14-10-2018 IPR003593 AAA+ ATPase domain GYO_0669 b1308ac98c77c6069cf53cf03360a0f8 308 Gene3D G3DSA:3.40.50.300 2 254 5.9E-61 T 14-10-2018 GYO_0669 b1308ac98c77c6069cf53cf03360a0f8 308 Pfam PF00005 ABC transporter 21 162 3.4E-31 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 GYO_0669 b1308ac98c77c6069cf53cf03360a0f8 308 ProSitePatterns PS00211 ABC transporters family signature. 134 148 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 GYO_3675 359c8fde52a8fd173a5418c1557adb87 264 Pfam PF00106 short chain dehydrogenase 8 193 6.5E-44 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR GYO_3675 359c8fde52a8fd173a5418c1557adb87 264 SUPERFAMILY SSF51735 6 259 4.35E-64 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily GYO_3675 359c8fde52a8fd173a5418c1557adb87 264 Gene3D G3DSA:3.40.50.720 1 264 1.2E-76 T 14-10-2018 GYO_3675 359c8fde52a8fd173a5418c1557adb87 264 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 223 243 2.9E-29 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR GYO_3675 359c8fde52a8fd173a5418c1557adb87 264 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 175 192 2.9E-29 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR GYO_3675 359c8fde52a8fd173a5418c1557adb87 264 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 128 144 2.9E-29 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR GYO_3675 359c8fde52a8fd173a5418c1557adb87 264 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 81 92 2.9E-29 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR GYO_3675 359c8fde52a8fd173a5418c1557adb87 264 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 9 26 2.9E-29 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR GYO_3675 359c8fde52a8fd173a5418c1557adb87 264 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 154 173 2.9E-29 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR GYO_3675 359c8fde52a8fd173a5418c1557adb87 264 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 81 92 3.1E-6 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR GYO_3675 359c8fde52a8fd173a5418c1557adb87 264 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 134 142 3.1E-6 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR GYO_3675 359c8fde52a8fd173a5418c1557adb87 264 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 154 173 3.1E-6 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR GYO_3464 4854c855fe39181bbdf30f9d982b9d34 122 PIRSF PIRSF009597 1 121 5.7E-55 T 14-10-2018 IPR016559 Uncharacterised conserved protein UCP009597 GYO_2739 8349ca20c150625aed3de589bb30bd17 279 SUPERFAMILY SSF52091 164 270 5.69E-16 T 14-10-2018 IPR036513 STAS domain superfamily GYO_2739 8349ca20c150625aed3de589bb30bd17 279 Pfam PF01740 STAS domain 164 266 1.4E-15 T 14-10-2018 IPR002645 STAS domain GYO_2739 8349ca20c150625aed3de589bb30bd17 279 Pfam PF14361 RsbT co-antagonist protein rsbRD N-terminal domain 4 105 6.8E-13 T 14-10-2018 IPR025751 RsbT co-antagonist protein RsbRD, N-terminal domain GYO_2739 8349ca20c150625aed3de589bb30bd17 279 Gene3D G3DSA:3.30.750.24 159 275 1.5E-34 T 14-10-2018 IPR036513 STAS domain superfamily GYO_0438 ff13ccaaa26f484980d834b6a7e453d9 470 PIRSF PIRSF006060 1 467 9.5E-82 T 14-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 GYO_0438 ff13ccaaa26f484980d834b6a7e453d9 470 Gene3D G3DSA:1.20.1740.10 11 468 4.6E-63 T 14-10-2018 GYO_0438 ff13ccaaa26f484980d834b6a7e453d9 470 ProSitePatterns PS00218 Amino acid permeases signature. 45 76 - T 14-10-2018 IPR004840 Amino acid permease, conserved site GO:0006865|GO:0016021|GO:0055085 GYO_0438 ff13ccaaa26f484980d834b6a7e453d9 470 Pfam PF00324 Amino acid permease 20 461 5.3E-116 T 14-10-2018 IPR004841 Amino acid permease/ SLC12A domain GO:0016020|GO:0055085 GYO_3113 868329d25cdd1ef34299be5079bba1b6 71 Hamap MF_00669 Small, acid-soluble spore protein I [sspI]. 1 68 21.819 T 14-10-2018 IPR017525 Small, acid-soluble spore protein I GO:0030436 GYO_3113 868329d25cdd1ef34299be5079bba1b6 71 TIGRFAM TIGR03092 SASP_sspI: small, acid-soluble spore protein I 4 68 1.1E-33 T 14-10-2018 IPR017525 Small, acid-soluble spore protein I GO:0030436 GYO_3113 868329d25cdd1ef34299be5079bba1b6 71 Pfam PF14098 Small, acid-soluble spore protein I 3 66 3.1E-30 T 14-10-2018 IPR017525 Small, acid-soluble spore protein I GO:0030436 GYO_3869 aa198cca977ccf2c25f00ba784b1fcc4 266 Pfam PF00665 Integrase core domain 107 218 1.4E-21 T 14-10-2018 IPR001584 Integrase, catalytic core GO:0015074 GYO_3869 aa198cca977ccf2c25f00ba784b1fcc4 266 Pfam PF13276 HTH-like domain 32 84 6.9E-14 T 14-10-2018 IPR025948 HTH-like domain GYO_3869 aa198cca977ccf2c25f00ba784b1fcc4 266 Gene3D G3DSA:3.30.420.10 101 257 5.6E-14 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 GYO_3869 aa198cca977ccf2c25f00ba784b1fcc4 266 SUPERFAMILY SSF53098 101 260 4.05E-30 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily GYO_0807 a6a5d25d45eefa55006d5fbe88c1ed7a 341 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 5 125 1.2E-27 T 14-10-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 GYO_0807 a6a5d25d45eefa55006d5fbe88c1ed7a 341 Gene3D G3DSA:3.30.360.10 144 272 1.5E-96 T 14-10-2018 GYO_0807 a6a5d25d45eefa55006d5fbe88c1ed7a 341 SUPERFAMILY SSF51735 4 153 1.37E-43 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily GYO_0807 a6a5d25d45eefa55006d5fbe88c1ed7a 341 Gene3D G3DSA:3.40.50.720 6 322 1.5E-96 T 14-10-2018 GYO_0807 a6a5d25d45eefa55006d5fbe88c1ed7a 341 SUPERFAMILY SSF55347 133 290 3.76E-25 T 14-10-2018 GYO_0807 a6a5d25d45eefa55006d5fbe88c1ed7a 341 Pfam PF02894 Oxidoreductase family, C-terminal alpha/beta domain 139 244 1.6E-4 T 14-10-2018 IPR004104 Oxidoreductase, C-terminal GO:0016491|GO:0055114 GYO_3841 c6e321d4574bfcfd008949a61832c4c3 1289 SUPERFAMILY SSF74853 170 234 3.4E-5 T 14-10-2018 IPR036415 Lamin tail domain superfamily GYO_3841 c6e321d4574bfcfd008949a61832c4c3 1289 SUPERFAMILY SSF56300 918 1121 3.6E-30 T 14-10-2018 GYO_3841 c6e321d4574bfcfd008949a61832c4c3 1289 Gene3D G3DSA:3.60.21.10 921 1134 1.5E-17 T 14-10-2018 IPR029052 Metallo-dependent phosphatase-like GYO_3841 c6e321d4574bfcfd008949a61832c4c3 1289 PIRSF PIRSF036444 1 1289 0.0 T 14-10-2018 IPR011401 Phosphoesterase, YvnB GYO_3841 c6e321d4574bfcfd008949a61832c4c3 1289 Pfam PF00932 Lamin Tail Domain 151 244 6.5E-8 T 14-10-2018 IPR001322 Lamin tail domain GYO_3841 c6e321d4574bfcfd008949a61832c4c3 1289 Pfam PF00149 Calcineurin-like phosphoesterase 921 1117 3.9E-14 T 14-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 GYO_3037 9575adeba8ea17f2772e72be058792a1 102 TIGRFAM TIGR00061 L21: ribosomal protein bL21 2 101 1.5E-42 T 14-10-2018 IPR001787 Ribosomal protein L21 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 GYO_3037 9575adeba8ea17f2772e72be058792a1 102 Hamap MF_01363 50S ribosomal protein L21 [rplU]. 1 102 26.982 T 14-10-2018 IPR001787 Ribosomal protein L21 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 GYO_3037 9575adeba8ea17f2772e72be058792a1 102 SUPERFAMILY SSF141091 1 101 1.05E-38 T 14-10-2018 IPR036164 L21-like superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 GYO_3037 9575adeba8ea17f2772e72be058792a1 102 Pfam PF00829 Ribosomal prokaryotic L21 protein 1 100 1.5E-40 T 14-10-2018 IPR028909 Ribosomal protein L21-like GO:0005840 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 GYO_3037 9575adeba8ea17f2772e72be058792a1 102 ProSitePatterns PS01169 Ribosomal protein L21 signature. 71 93 - T 14-10-2018 IPR018258 Ribosomal protein L21, conserved site GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 GYO_3010 d62da7d61869bd06a4153c1f92737cbb 88 TIGRFAM TIGR00739 yajC: preprotein translocase, YajC subunit 4 85 1.0E-33 T 14-10-2018 IPR003849 Preprotein translocase YajC GYO_3010 d62da7d61869bd06a4153c1f92737cbb 88 SMART SM01323 3 85 6.3E-44 T 14-10-2018 IPR003849 Preprotein translocase YajC GYO_3010 d62da7d61869bd06a4153c1f92737cbb 88 Pfam PF02699 Preprotein translocase subunit 7 82 2.7E-31 T 14-10-2018 IPR003849 Preprotein translocase YajC GYO_3010 d62da7d61869bd06a4153c1f92737cbb 88 PRINTS PR01853 Bacterial YajC preprotein translocase signature 43 61 3.5E-15 T 14-10-2018 IPR003849 Preprotein translocase YajC GYO_3010 d62da7d61869bd06a4153c1f92737cbb 88 PRINTS PR01853 Bacterial YajC preprotein translocase signature 5 25 3.5E-15 T 14-10-2018 IPR003849 Preprotein translocase YajC GYO_0158 761890aa765c487ae4cca750c89e8865 120 Hamap MF_01337_B 50S ribosomal protein L18 [rplR]. 6 120 30.99 T 14-10-2018 IPR004389 Ribosomal protein L18, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 GYO_0158 761890aa765c487ae4cca750c89e8865 120 SUPERFAMILY SSF53137 7 118 1.1E-56 T 14-10-2018 GYO_0158 761890aa765c487ae4cca750c89e8865 120 Gene3D G3DSA:3.30.420.100 5 120 1.7E-47 T 14-10-2018 GYO_0158 761890aa765c487ae4cca750c89e8865 120 Pfam PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast 6 120 6.3E-54 T 14-10-2018 IPR005484 Ribosomal protein L18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 GYO_0158 761890aa765c487ae4cca750c89e8865 120 TIGRFAM TIGR00060 L18_bact: ribosomal protein uL18 7 120 3.2E-50 T 14-10-2018 IPR004389 Ribosomal protein L18, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 GYO_0080 f75dec20fc303132d69bf0e34026b2c2 472 SUPERFAMILY SSF56037 347 443 5.49E-18 T 14-10-2018 GYO_0080 f75dec20fc303132d69bf0e34026b2c2 472 SUPERFAMILY SSF82829 213 322 2.12E-11 T 14-10-2018 GYO_0080 f75dec20fc303132d69bf0e34026b2c2 472 Gene3D G3DSA:3.40.50.620 6 236 5.2E-74 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold GYO_0080 f75dec20fc303132d69bf0e34026b2c2 472 TIGRFAM TIGR02433 lysidine_TilS_C: tRNA(Ile)-lysidine synthetase, C-terminal domain 385 430 1.8E-21 T 14-10-2018 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 GYO_0080 f75dec20fc303132d69bf0e34026b2c2 472 Pfam PF09179 TilS substrate binding domain 259 323 5.6E-5 T 14-10-2018 IPR015262 tRNA(Ile)-lysidine synthase , substrate-binding domain GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 GYO_0080 f75dec20fc303132d69bf0e34026b2c2 472 SUPERFAMILY SSF52402 8 235 7.22E-58 T 14-10-2018 GYO_0080 f75dec20fc303132d69bf0e34026b2c2 472 SMART SM00977 385 460 6.9E-26 T 14-10-2018 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 GYO_0080 f75dec20fc303132d69bf0e34026b2c2 472 TIGRFAM TIGR02432 lysidine_TilS_N: tRNA(Ile)-lysidine synthetase 20 206 2.5E-63 T 14-10-2018 IPR012795 tRNA(Ile)-lysidine synthase, N-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 GYO_0080 f75dec20fc303132d69bf0e34026b2c2 472 Pfam PF11734 TilS substrate C-terminal domain 385 443 5.3E-16 T 14-10-2018 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 GYO_0080 f75dec20fc303132d69bf0e34026b2c2 472 Hamap MF_01161 tRNA(Ile)-lysidine synthase [tilS]. 11 317 25.062 T 14-10-2018 IPR012094 tRNA(Ile)-lysidine synthase GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 GYO_0080 f75dec20fc303132d69bf0e34026b2c2 472 Gene3D G3DSA:1.20.59.30 244 329 9.1E-30 T 14-10-2018 GYO_0080 f75dec20fc303132d69bf0e34026b2c2 472 Pfam PF01171 PP-loop family 20 202 3.1E-64 T 14-10-2018 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal Reactome: R-HSA-6782315 GYO_2245 aae8a0f01fdb791f0c29707dc75ed3b1 345 Pfam PF00544 Pectate lyase 92 273 1.1E-47 T 14-10-2018 IPR002022 Pectate lyase GYO_2245 aae8a0f01fdb791f0c29707dc75ed3b1 345 Gene3D G3DSA:2.160.20.10 35 341 5.3E-59 T 14-10-2018 IPR012334 Pectin lyase fold GYO_2245 aae8a0f01fdb791f0c29707dc75ed3b1 345 SUPERFAMILY SSF51126 37 338 5.46E-59 T 14-10-2018 IPR011050 Pectin lyase fold/virulence factor GYO_2245 aae8a0f01fdb791f0c29707dc75ed3b1 345 SMART SM00656 58 279 1.2E-60 T 14-10-2018 IPR002022 Pectate lyase GYO_1746 404a8b39efe3b2245c2771524f7f01ed 172 Pfam PF04308 Ribonuclease H-like 19 172 4.0E-53 T 14-10-2018 IPR007405 Bacteriophage KVP40, Orf299 GYO_1713 46cc5263811a64ccfaf814744674a78a 209 Gene3D G3DSA:1.10.10.2520 94 172 2.5E-30 T 14-10-2018 GYO_1713 46cc5263811a64ccfaf814744674a78a 209 Gene3D G3DSA:2.40.10.420 177 208 7.5E-14 T 14-10-2018 GYO_1713 46cc5263811a64ccfaf814744674a78a 209 Pfam PF07486 Cell Wall Hydrolase 110 207 1.6E-27 T 14-10-2018 IPR011105 Cell wall hydrolase, SleB GO:0016787 GYO_3523 b44c71083ae338f25aad442f3a4601c2 144 Pfam PF01934 Protein of unknown function DUF86 31 129 5.0E-17 T 14-10-2018 IPR008201 Protein of unknown function DUF86 GYO_3523 b44c71083ae338f25aad442f3a4601c2 144 Gene3D G3DSA:1.20.120.580 1 144 2.2E-56 T 14-10-2018 IPR037038 Bsu32300-like superfamily GYO_0615 15101f732bb600cda4bb8fb32bedcfd4 477 Pfam PF02378 Phosphotransferase system, EIIC 23 281 2.9E-18 T 14-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 GYO_0615 15101f732bb600cda4bb8fb32bedcfd4 477 SUPERFAMILY SSF52794 389 477 9.24E-28 T 14-10-2018 IPR036095 PTS system IIB component-like superfamily GO:0008982|GO:0009401 GYO_0615 15101f732bb600cda4bb8fb32bedcfd4 477 TIGRFAM TIGR00851 mtlA: PTS system, mannitol-specific IIC component 13 351 2.7E-192 T 14-10-2018 IPR004718 Phosphotransferase system, mannitol-specific enzyme IIC GO:0008982|GO:0009401|GO:0016021 KEGG: 00051+2.7.1.197 GYO_0615 15101f732bb600cda4bb8fb32bedcfd4 477 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 390 474 7.9E-13 T 14-10-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 GYO_0615 15101f732bb600cda4bb8fb32bedcfd4 477 Gene3D G3DSA:3.40.50.2300 377 477 3.0E-40 T 14-10-2018 GYO_1400 acdde15c5d85f3ef769d24e205d4264e 228 SUPERFAMILY SSF142823 2 216 7.72E-44 T 14-10-2018 IPR036702 ComB-like superfamily GO:0000287|GO:0050532 KEGG: 00680+3.1.3.71 GYO_1400 acdde15c5d85f3ef769d24e205d4264e 228 Pfam PF04029 2-phosphosulpholactate phosphatase 7 216 5.6E-41 T 14-10-2018 IPR005238 ComB-like GO:0000287|GO:0050532 KEGG: 00680+3.1.3.71 GYO_1400 acdde15c5d85f3ef769d24e205d4264e 228 Gene3D G3DSA:3.90.1560.10 1 223 1.8E-39 T 14-10-2018 IPR036702 ComB-like superfamily GO:0000287|GO:0050532 KEGG: 00680+3.1.3.71 GYO_1756 e13aed7c7fee6713cc9c8eb777ddc1e8 267 Pfam PF00924 Mechanosensitive ion channel 68 260 6.5E-51 T 14-10-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 GYO_1756 e13aed7c7fee6713cc9c8eb777ddc1e8 267 Gene3D G3DSA:3.30.70.100 176 261 3.7E-23 T 14-10-2018 GYO_1756 e13aed7c7fee6713cc9c8eb777ddc1e8 267 SUPERFAMILY SSF82861 28 109 6.54E-14 T 14-10-2018 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 GYO_1756 e13aed7c7fee6713cc9c8eb777ddc1e8 267 Gene3D G3DSA:2.30.30.60 126 175 2.2E-22 T 14-10-2018 IPR023408 Mechanosensitive ion channel MscS domain superfamily GYO_1756 e13aed7c7fee6713cc9c8eb777ddc1e8 267 SUPERFAMILY SSF50182 111 171 5.56E-15 T 14-10-2018 IPR010920 LSM domain superfamily GYO_1756 e13aed7c7fee6713cc9c8eb777ddc1e8 267 SUPERFAMILY SSF82689 174 261 4.45E-11 T 14-10-2018 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 GYO_3808 20a0759b74a04f2944f77b1c3ec20cc7 251 SUPERFAMILY SSF54001 3 250 2.7E-61 T 14-10-2018 IPR038765 Papain-like cysteine peptidase superfamily GYO_3808 20a0759b74a04f2944f77b1c3ec20cc7 251 PRINTS PR01543 Arylamine N-acetyltransferase signature 68 90 2.3E-6 T 14-10-2018 IPR001447 Arylamine N-acetyltransferase GO:0016407 KEGG: 00232+2.3.1.5|KEGG: 00633+2.3.1.5|KEGG: 00983+2.3.1.5|Reactome: R-HSA-156582 GYO_3808 20a0759b74a04f2944f77b1c3ec20cc7 251 PRINTS PR01543 Arylamine N-acetyltransferase signature 101 126 2.3E-6 T 14-10-2018 IPR001447 Arylamine N-acetyltransferase GO:0016407 KEGG: 00232+2.3.1.5|KEGG: 00633+2.3.1.5|KEGG: 00983+2.3.1.5|Reactome: R-HSA-156582 GYO_3808 20a0759b74a04f2944f77b1c3ec20cc7 251 PRINTS PR01543 Arylamine N-acetyltransferase signature 44 67 2.3E-6 T 14-10-2018 IPR001447 Arylamine N-acetyltransferase GO:0016407 KEGG: 00232+2.3.1.5|KEGG: 00633+2.3.1.5|KEGG: 00983+2.3.1.5|Reactome: R-HSA-156582 GYO_3808 20a0759b74a04f2944f77b1c3ec20cc7 251 Pfam PF00797 N-acetyltransferase 29 250 2.1E-52 T 14-10-2018 IPR001447 Arylamine N-acetyltransferase GO:0016407 KEGG: 00232+2.3.1.5|KEGG: 00633+2.3.1.5|KEGG: 00983+2.3.1.5|Reactome: R-HSA-156582 GYO_3808 20a0759b74a04f2944f77b1c3ec20cc7 251 Gene3D G3DSA:3.30.2140.20 1 251 1.9E-72 T 14-10-2018 GYO_0771 77ec6c55e0e715cf262049101a663811 207 SUPERFAMILY SSF50475 16 201 1.18E-30 T 14-10-2018 GYO_0771 77ec6c55e0e715cf262049101a663811 207 Pfam PF01613 Flavin reductase like domain 25 195 8.3E-7 T 14-10-2018 IPR002563 Flavin reductase like domain GO:0010181 GYO_0771 77ec6c55e0e715cf262049101a663811 207 Gene3D G3DSA:2.30.110.10 11 207 2.3E-35 T 14-10-2018 IPR012349 FMN-binding split barrel GO:0048037 GYO_3933 e5ff413f9741c8a2b97c9aefe22353b0 237 Gene3D G3DSA:3.90.550.10 1 237 6.6E-77 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases GYO_3933 e5ff413f9741c8a2b97c9aefe22353b0 237 Hamap MF_02068 Ribitol-5-phosphate cytidylyltransferase [tarI]. 1 234 48.033 T 14-10-2018 IPR034709 Ribitol-5-phosphate cytidylyltransferase GO:0047349 KEGG: 00040+2.7.7.40|KEGG: 00515+2.7.7.40|MetaCyc: PWY-7815|MetaCyc: PWY-7816|MetaCyc: PWY-7818|MetaCyc: PWY-7981 GYO_3933 e5ff413f9741c8a2b97c9aefe22353b0 237 SUPERFAMILY SSF53448 2 232 9.46E-53 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases GYO_3933 e5ff413f9741c8a2b97c9aefe22353b0 237 Pfam PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 6 232 1.1E-45 T 14-10-2018 IPR034683 Cytidylyltransferase IspD/TarI GO:0070567 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 GYO_3933 e5ff413f9741c8a2b97c9aefe22353b0 237 ProSitePatterns PS01295 4-diphosphocytidyl-2C-methyl-D-erythritol synthase signature. 107 114 - T 14-10-2018 IPR018294 4-diphosphocytidyl-2C-methyl-D-erythritol synthase, conserved site GO:0003824|GO:0008299 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 GYO_0677 b0244ba48d7abcdb105f05514e5a8c52 361 PIRSF PIRSF039102 1 356 1.7E-116 T 14-10-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 GYO_0677 b0244ba48d7abcdb105f05514e5a8c52 361 Pfam PF01820 D-ala D-ala ligase N-terminus 5 124 2.1E-31 T 14-10-2018 IPR011127 D-alanine--D-alanine ligase, N-terminal domain KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 GYO_0677 b0244ba48d7abcdb105f05514e5a8c52 361 TIGRFAM TIGR01205 D_ala_D_alaTIGR: D-alanine--D-alanine ligase 5 347 4.9E-123 T 14-10-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 GYO_0677 b0244ba48d7abcdb105f05514e5a8c52 361 Gene3D G3DSA:3.30.470.20 124 350 2.2E-82 T 14-10-2018 GYO_0677 b0244ba48d7abcdb105f05514e5a8c52 361 ProSitePatterns PS00844 D-alanine--D-alanine ligase signature 2. 290 318 - T 14-10-2018 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 GYO_0677 b0244ba48d7abcdb105f05514e5a8c52 361 Gene3D G3DSA:3.40.50.20 1 123 4.4E-37 T 14-10-2018 GYO_0677 b0244ba48d7abcdb105f05514e5a8c52 361 SUPERFAMILY SSF56059 135 353 1.82E-63 T 14-10-2018 GYO_0677 b0244ba48d7abcdb105f05514e5a8c52 361 ProSitePatterns PS00843 D-alanine--D-alanine ligase signature 1. 102 113 - T 14-10-2018 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 GYO_0677 b0244ba48d7abcdb105f05514e5a8c52 361 Hamap MF_00047 D-alanine--D-alanine ligase [ddl]. 3 348 41.633 T 14-10-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 GYO_0677 b0244ba48d7abcdb105f05514e5a8c52 361 Gene3D G3DSA:3.30.1490.20 150 222 2.2E-82 T 14-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 GYO_0677 b0244ba48d7abcdb105f05514e5a8c52 361 Pfam PF07478 D-ala D-ala ligase C-terminus 142 345 6.5E-86 T 14-10-2018 IPR011095 D-alanine--D-alanine ligase, C-terminal GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 GYO_0677 b0244ba48d7abcdb105f05514e5a8c52 361 SUPERFAMILY SSF52440 2 134 7.1E-35 T 14-10-2018 IPR016185 Pre-ATP-grasp domain superfamily GYO_1381 b7d1aa38dcd7d0669a9232c28e23a889 118 Pfam PF07457 Protein of unknown function (DUF1516) 2 108 7.2E-37 T 14-10-2018 IPR010899 Protein of unknown function UPF0344 GYO_1381 b7d1aa38dcd7d0669a9232c28e23a889 118 Hamap MF_01536 UPF0344 protein . 1 118 17.394 T 14-10-2018 IPR010899 Protein of unknown function UPF0344 GYO_1381 b7d1aa38dcd7d0669a9232c28e23a889 118 ProDom PD067392 MEMBRANE UPF0344 TRANSMEMBRANE MW0851 BCE1257 SIMILAR YISL SAR0931 BCE33L1051 BT9727_1053 1 94 4.0E-46 T 14-10-2018 IPR010899 Protein of unknown function UPF0344 GYO_0043 1ab9b662401ade8a1dbb2a5224ddc21f 247 Pfam PF05175 Methyltransferase small domain 20 140 1.7E-10 T 14-10-2018 IPR007848 Methyltransferase small domain GO:0008168 GYO_0043 1ab9b662401ade8a1dbb2a5224ddc21f 247 SUPERFAMILY SSF53335 15 199 1.79E-31 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase GYO_0043 1ab9b662401ade8a1dbb2a5224ddc21f 247 Gene3D G3DSA:3.40.50.150 8 247 5.9E-72 T 14-10-2018 GYO_4503 6e494146a16368ead50f25fc62201f16 172 Gene3D G3DSA:2.40.50.140 1 109 1.7E-46 T 14-10-2018 GYO_4503 6e494146a16368ead50f25fc62201f16 172 Hamap MF_00984 Single-stranded DNA-binding protein. 2 107 37.016 T 14-10-2018 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 Reactome: R-HSA-2151201 GYO_4503 6e494146a16368ead50f25fc62201f16 172 Pfam PF00436 Single-strand binding protein family 2 103 4.8E-38 T 14-10-2018 IPR000424 Primosome PriB/single-strand DNA-binding GO:0003697 Reactome: R-HSA-2151201 GYO_4503 6e494146a16368ead50f25fc62201f16 172 TIGRFAM TIGR00621 ssb: single-stranded DNA-binding protein 1 172 1.4E-53 T 14-10-2018 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 Reactome: R-HSA-2151201 GYO_4503 6e494146a16368ead50f25fc62201f16 172 SUPERFAMILY SSF50249 1 172 1.3E-57 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold GYO_0916 38d0f31d48cd421e641af7538132775d 77 Pfam PF11127 Protein of unknown function (DUF2892) 1 63 1.2E-9 T 14-10-2018 IPR021309 Protein of unknown function DUF2892 GYO_2063 7257e50f06d9607a7c21d33d65360483 205 SUPERFAMILY SSF46689 2 84 1.1E-16 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 GYO_2063 7257e50f06d9607a7c21d33d65360483 205 Pfam PF13977 BetI-type transcriptional repressor, C-terminal 82 193 9.8E-25 T 14-10-2018 IPR039538 BetI-type transcriptional repressor, C-terminal GYO_2063 7257e50f06d9607a7c21d33d65360483 205 SUPERFAMILY SSF48498 81 195 4.36E-27 T 14-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily GYO_2063 7257e50f06d9607a7c21d33d65360483 205 ProSitePatterns PS01081 TetR-type HTH domain signature. 26 57 - T 14-10-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site GYO_2063 7257e50f06d9607a7c21d33d65360483 205 Gene3D G3DSA:1.10.357.10 3 203 2.8E-52 T 14-10-2018 GYO_2063 7257e50f06d9607a7c21d33d65360483 205 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 14 27 3.4E-5 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 GYO_2063 7257e50f06d9607a7c21d33d65360483 205 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 35 58 3.4E-5 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 GYO_2063 7257e50f06d9607a7c21d33d65360483 205 Pfam PF00440 Bacterial regulatory proteins, tetR family 14 57 8.6E-10 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 GYO_3244 f0e1095d9f98a8f22efd47188fb66b3e 183 Pfam PF13563 2'-5' RNA ligase superfamily 38 136 2.5E-17 T 14-10-2018 GYO_3244 f0e1095d9f98a8f22efd47188fb66b3e 183 Gene3D G3DSA:3.90.1140.10 7 183 3.9E-38 T 14-10-2018 GYO_3244 f0e1095d9f98a8f22efd47188fb66b3e 183 SUPERFAMILY SSF55144 6 182 1.53E-40 T 14-10-2018 IPR009097 Cyclic phosphodiesterase GYO_3244 f0e1095d9f98a8f22efd47188fb66b3e 183 TIGRFAM TIGR02258 2_5_ligase: 2'-5' RNA ligase 7 182 1.3E-49 T 14-10-2018 IPR004175 RNA 2',3'-cyclic phosphodiesterase GO:0004113|GO:0008664 GYO_3244 f0e1095d9f98a8f22efd47188fb66b3e 183 Hamap MF_01940 RNA 2',3'-cyclic phosphodiesterase [thpR]. 6 182 20.268 T 14-10-2018 IPR004175 RNA 2',3'-cyclic phosphodiesterase GO:0004113|GO:0008664 GYO_1625 f696d11b391cd749ba967ae418a588c9 243 Gene3D G3DSA:3.30.240.20 167 228 8.7E-12 T 14-10-2018 IPR023090 UPF0702, alpha/beta domain superfamily GYO_1625 f696d11b391cd749ba967ae418a588c9 243 Gene3D G3DSA:3.30.240.20 80 151 1.1E-19 T 14-10-2018 IPR023090 UPF0702, alpha/beta domain superfamily GYO_1625 f696d11b391cd749ba967ae418a588c9 243 Pfam PF04239 Protein of unknown function (DUF421) 90 202 8.1E-31 T 14-10-2018 IPR007353 Protein of unknown function DUF421 GYO_1696 6504d41c509441c96bcc35c5d5fd5fe6 261 Pfam PF13677 Membrane MotB of proton-channel complex MotA/MotB 4 58 3.2E-21 T 14-10-2018 IPR025713 Motility protein B, N-terminal domain GYO_1696 6504d41c509441c96bcc35c5d5fd5fe6 261 Pfam PF00691 OmpA family 144 244 9.2E-15 T 14-10-2018 IPR006665 OmpA-like domain GYO_1696 6504d41c509441c96bcc35c5d5fd5fe6 261 SUPERFAMILY SSF103088 132 252 4.58E-29 T 14-10-2018 IPR036737 OmpA-like domain superfamily GYO_1696 6504d41c509441c96bcc35c5d5fd5fe6 261 Gene3D G3DSA:3.30.1330.60 86 260 4.4E-45 T 14-10-2018 IPR036737 OmpA-like domain superfamily GYO_0776 cfdb6f46557843a6240d81f5395340e5 387 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 292 379 1.1E-10 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase GYO_0776 cfdb6f46557843a6240d81f5395340e5 387 Gene3D G3DSA:3.30.565.10 250 385 8.5E-27 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily GYO_0776 cfdb6f46557843a6240d81f5395340e5 387 Pfam PF07730 Histidine kinase 181 247 1.6E-16 T 14-10-2018 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 GYO_0776 cfdb6f46557843a6240d81f5395340e5 387 SMART SM00387 286 382 4.8E-7 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase GYO_0776 cfdb6f46557843a6240d81f5395340e5 387 SUPERFAMILY SSF55874 256 379 4.06E-17 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily GYO_1217 d084e4e82295511b787eb73d280ff85b 496 SUPERFAMILY SSF53067 4 254 7.53E-100 T 14-10-2018 GYO_1217 d084e4e82295511b787eb73d280ff85b 496 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 4 251 4.4E-95 T 14-10-2018 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 GYO_1217 d084e4e82295511b787eb73d280ff85b 496 Gene3D G3DSA:3.30.420.40 253 496 1.8E-91 T 14-10-2018 GYO_1217 d084e4e82295511b787eb73d280ff85b 496 SUPERFAMILY SSF53067 254 493 1.25E-87 T 14-10-2018 GYO_1217 d084e4e82295511b787eb73d280ff85b 496 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 261 449 1.6E-66 T 14-10-2018 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 GYO_1217 d084e4e82295511b787eb73d280ff85b 496 TIGRFAM TIGR01311 glycerol_kin: glycerol kinase 4 493 6.0E-227 T 14-10-2018 IPR005999 Glycerol kinase GO:0004370|GO:0006072 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|Reactome: R-HSA-75109 GYO_1217 d084e4e82295511b787eb73d280ff85b 496 Hamap MF_00186 Glycerol kinase [glpK]. 2 496 59.897 T 14-10-2018 IPR005999 Glycerol kinase GO:0004370|GO:0006072 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|Reactome: R-HSA-75109 GYO_1217 d084e4e82295511b787eb73d280ff85b 496 ProSitePatterns PS00933 FGGY family of carbohydrate kinases signature 1. 134 146 - T 14-10-2018 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 GYO_1217 d084e4e82295511b787eb73d280ff85b 496 Gene3D G3DSA:3.30.420.40 1 252 2.0E-114 T 14-10-2018 GYO_1217 d084e4e82295511b787eb73d280ff85b 496 PIRSF PIRSF000538 2 495 2.6E-180 T 14-10-2018 IPR000577 Carbohydrate kinase, FGGY GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 GYO_1217 d084e4e82295511b787eb73d280ff85b 496 ProSitePatterns PS00445 FGGY family of carbohydrate kinases signature 2. 361 381 - T 14-10-2018 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 GYO_3560 783a0b6fad57f0c19e034017511d1993 422 Pfam PF01547 Bacterial extracellular solute-binding protein 43 332 1.4E-54 T 14-10-2018 IPR006059 Bacterial extracellular solute-binding protein GYO_3560 783a0b6fad57f0c19e034017511d1993 422 Gene3D G3DSA:3.40.190.10 48 375 1.0E-99 T 14-10-2018 GYO_3560 783a0b6fad57f0c19e034017511d1993 422 SUPERFAMILY SSF53850 19 417 1.19E-90 T 14-10-2018 GYO_3560 783a0b6fad57f0c19e034017511d1993 422 Gene3D G3DSA:3.40.190.10 149 409 1.0E-99 T 14-10-2018 GYO_4397 27943b3887219e539d65eb072cf824cf 402 Pfam PF04235 Protein of unknown function (DUF418) 242 391 6.4E-49 T 14-10-2018 IPR007349 Domain of unknown function DUF418 GYO_2003 8cf0e2aa4885257a4b19acaae451f7ad 170 ProDom PD177368 TRANSCRIPTION DNA-BINDING MOTILITY SWRB SWARMING YLXL REGULATION BH2428 4 167 1.0E-47 T 14-10-2018 GYO_2849 e094245e81825c4d2616858dd6cfc729 368 SMART SM01119 254 351 1.2E-32 T 14-10-2018 IPR026956 D-serine dehydratase-like domain GYO_2849 e094245e81825c4d2616858dd6cfc729 368 Gene3D G3DSA:2.40.37.20 6 364 6.7E-107 T 14-10-2018 GYO_2849 e094245e81825c4d2616858dd6cfc729 368 Gene3D G3DSA:3.20.20.10 15 238 6.7E-107 T 14-10-2018 IPR029066 PLP-binding barrel GYO_2849 e094245e81825c4d2616858dd6cfc729 368 Pfam PF14031 Putative serine dehydratase domain 254 350 2.7E-19 T 14-10-2018 IPR026956 D-serine dehydratase-like domain GYO_2849 e094245e81825c4d2616858dd6cfc729 368 Pfam PF01168 Alanine racemase, N-terminal domain 13 240 5.4E-28 T 14-10-2018 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 GYO_2849 e094245e81825c4d2616858dd6cfc729 368 SUPERFAMILY SSF51419 13 245 4.22E-42 T 14-10-2018 IPR029066 PLP-binding barrel GYO_4207 932f35a15aca2b098378898ece39a70f 204 SUPERFAMILY SSF81452 21 200 1.57E-52 T 14-10-2018 IPR035973 Cytochrome c oxidase subunit III-like superfamily GO:0015002|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 GYO_4207 932f35a15aca2b098378898ece39a70f 204 TIGRFAM TIGR02897 QoxC: cytochrome aa3 quinol oxidase, subunit III 14 201 3.5E-90 T 14-10-2018 IPR014246 Quinol oxidase subunit III GO:0015002|GO:0016021|GO:0042773 GYO_4207 932f35a15aca2b098378898ece39a70f 204 Gene3D G3DSA:1.20.120.80 18 201 5.9E-53 T 14-10-2018 IPR013833 Cytochrome c oxidase, subunit III, 4-helical bundle GO:0004129|GO:0016020|GO:0022904 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 GYO_4207 932f35a15aca2b098378898ece39a70f 204 Pfam PF00510 Cytochrome c oxidase subunit III 25 200 4.5E-14 T 14-10-2018 IPR000298 Cytochrome c oxidase subunit III-like GO:0015002|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 GYO_2388 219b5b7ba6b8303f39b69f4529d1115d 317 Pfam PF12996 DUF based on E. rectale Gene description (DUF3880) 80 152 7.6E-14 T 14-10-2018 IPR024542 Domain of unknown function DUF3880 GYO_2388 219b5b7ba6b8303f39b69f4529d1115d 317 SUPERFAMILY SSF53756 69 216 3.61E-5 T 14-10-2018 GYO_2388 219b5b7ba6b8303f39b69f4529d1115d 317 Pfam PF13524 Glycosyl transferases group 1 223 307 1.3E-10 T 14-10-2018 GYO_1765 c2ffb5253f9b35a2b24f5bf6913006e0 177 SUPERFAMILY SSF52540 8 160 1.66E-15 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase GYO_1765 c2ffb5253f9b35a2b24f5bf6913006e0 177 Pfam PF03205 Molybdopterin guanine dinucleotide synthesis protein B 9 137 2.8E-28 T 14-10-2018 IPR004435 Molybdopterin-guanine dinucleotide biosynthesis protein B (MobB) domain GO:0005525|GO:0006777 GYO_1765 c2ffb5253f9b35a2b24f5bf6913006e0 177 TIGRFAM TIGR00176 mobB: molybdopterin-guanine dinucleotide biosynthesis protein B 9 161 1.2E-28 T 14-10-2018 IPR004435 Molybdopterin-guanine dinucleotide biosynthesis protein B (MobB) domain GO:0005525|GO:0006777 GYO_1765 c2ffb5253f9b35a2b24f5bf6913006e0 177 Gene3D G3DSA:3.40.50.300 7 172 3.5E-64 T 14-10-2018 GYO_2829 2e2f9a6c642044ddaccea3453c3ac9b1 205 TIGRFAM TIGR01259 comE: comEA protein 81 204 6.0E-52 T 14-10-2018 IPR004787 Competence protein ComEA GYO_2829 2e2f9a6c642044ddaccea3453c3ac9b1 205 Gene3D G3DSA:1.10.150.280 133 205 5.8E-24 T 14-10-2018 GYO_2829 2e2f9a6c642044ddaccea3453c3ac9b1 205 Pfam PF12836 Helix-hairpin-helix motif 142 203 1.5E-23 T 14-10-2018 GYO_2829 2e2f9a6c642044ddaccea3453c3ac9b1 205 SUPERFAMILY SSF47781 122 204 1.08E-31 T 14-10-2018 IPR010994 RuvA domain 2-like GYO_2829 2e2f9a6c642044ddaccea3453c3ac9b1 205 Pfam PF10531 SLBB domain 63 118 3.3E-14 T 14-10-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 GYO_2829 2e2f9a6c642044ddaccea3453c3ac9b1 205 Gene3D G3DSA:3.10.560.10 48 128 7.3E-10 T 14-10-2018 GYO_2829 2e2f9a6c642044ddaccea3453c3ac9b1 205 SMART SM00278 152 171 0.0093 T 14-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 GYO_2829 2e2f9a6c642044ddaccea3453c3ac9b1 205 SMART SM00278 182 201 0.25 T 14-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 GYO_2829 2e2f9a6c642044ddaccea3453c3ac9b1 205 TIGRFAM TIGR00426 TIGR00426: competence protein ComEA helix-hairpin-helix repeat region 136 204 4.6E-34 T 14-10-2018 IPR004509 Competence protein ComEA, helix-hairpin-helix domain GYO_3824 0a0c8d3704ad6ad6df63ccf17c495ce8 252 Gene3D G3DSA:3.20.20.70 1 252 9.9E-103 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 GYO_3824 0a0c8d3704ad6ad6df63ccf17c495ce8 252 Pfam PF00977 Histidine biosynthesis protein 5 235 2.8E-84 T 14-10-2018 IPR006062 Histidine biosynthesis GO:0000105 GYO_3824 0a0c8d3704ad6ad6df63ccf17c495ce8 252 Hamap MF_01013 Imidazole glycerol phosphate synthase subunit HisF [hisF]. 1 252 47.638 T 14-10-2018 IPR004651 Histidine biosynthesis, HisF GO:0000105|GO:0000107|GO:0005737 GYO_3824 0a0c8d3704ad6ad6df63ccf17c495ce8 252 SUPERFAMILY SSF51366 1 252 1.02E-76 T 14-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 GYO_3824 0a0c8d3704ad6ad6df63ccf17c495ce8 252 TIGRFAM TIGR00735 hisF: imidazoleglycerol phosphate synthase, cyclase subunit 1 252 1.1E-122 T 14-10-2018 IPR004651 Histidine biosynthesis, HisF GO:0000105|GO:0000107|GO:0005737 GYO_2821 73f313bfc6d00f7df21b1817d1d01f68 401 TIGRFAM TIGR02867 spore_II_P: stage II sporulation protein P 183 386 7.6E-77 T 14-10-2018 IPR010897 Sporulation stage II, protein P GYO_2821 73f313bfc6d00f7df21b1817d1d01f68 401 SUPERFAMILY SSF53187 241 385 3.26E-7 T 14-10-2018 GYO_2821 73f313bfc6d00f7df21b1817d1d01f68 401 Pfam PF07454 Stage II sporulation protein P (SpoIIP) 104 382 5.6E-79 T 14-10-2018 IPR010897 Sporulation stage II, protein P GYO_1524 cd0256742993073fce2c7398f4889a94 186 Pfam PF07849 Protein of unknown function (DUF1641) 118 155 4.7E-13 T 14-10-2018 IPR012440 Protein of unknown function DUF1641 GYO_1418 5edde928be838e65356d7be6cd517c1a 102 SUPERFAMILY SSF117916 4 100 6.54E-33 T 14-10-2018 IPR034904 Fe-S cluster assembly domain superfamily GYO_1418 5edde928be838e65356d7be6cd517c1a 102 Pfam PF01883 Iron-sulfur cluster assembly protein 6 80 5.2E-23 T 14-10-2018 IPR002744 MIP18 family-like GYO_1418 5edde928be838e65356d7be6cd517c1a 102 Gene3D G3DSA:3.30.300.130 1 102 2.5E-37 T 14-10-2018 IPR034904 Fe-S cluster assembly domain superfamily GYO_3381 4a4b895cfb286d0f4d1e432120d2f81e 163 SUPERFAMILY SSF109854 2 160 1.98E-31 T 14-10-2018 IPR034660 DinB/YfiT-like putative metalloenzymes GYO_3381 4a4b895cfb286d0f4d1e432120d2f81e 163 Gene3D G3DSA:1.20.120.450 1 161 2.2E-37 T 14-10-2018 IPR034660 DinB/YfiT-like putative metalloenzymes GYO_3381 4a4b895cfb286d0f4d1e432120d2f81e 163 Pfam PF12867 DinB superfamily 6 153 7.6E-22 T 14-10-2018 IPR024775 DinB-like domain GYO_3036 d52db479abea46bab6892a7d8d2019d6 112 Gene3D G3DSA:3.30.70.1490 1 111 3.0E-32 T 14-10-2018 IPR036764 Cysteine protease Prp superfamily GYO_3036 d52db479abea46bab6892a7d8d2019d6 112 Pfam PF04327 Cysteine protease Prp 1 105 1.3E-23 T 14-10-2018 IPR007422 Cysteine protease Prp GYO_3036 d52db479abea46bab6892a7d8d2019d6 112 SUPERFAMILY SSF118010 1 108 1.57E-30 T 14-10-2018 IPR036764 Cysteine protease Prp superfamily GYO_2124 0149433ba0b1087831278f39fc5daa77 144 Gene3D G3DSA:2.70.40.10 1 144 2.2E-43 T 14-10-2018 IPR036157 dUTPase-like superfamily GYO_2124 0149433ba0b1087831278f39fc5daa77 144 SUPERFAMILY SSF51283 6 143 2.88E-26 T 14-10-2018 IPR036157 dUTPase-like superfamily GYO_2124 0149433ba0b1087831278f39fc5daa77 144 Pfam PF00692 dUTPase 27 141 8.5E-17 T 14-10-2018 IPR029054 dUTPase-like GYO_1685 e5786c064a081d152cce4ef0dd0a4da2 397 Gene3D G3DSA:3.40.640.10 44 285 4.6E-114 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 GYO_1685 e5786c064a081d152cce4ef0dd0a4da2 397 Gene3D G3DSA:3.90.1150.10 26 383 4.6E-114 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 GYO_1685 e5786c064a081d152cce4ef0dd0a4da2 397 SUPERFAMILY SSF53383 6 386 1.21E-101 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase GYO_1685 e5786c064a081d152cce4ef0dd0a4da2 397 Pfam PF00155 Aminotransferase class I and II 33 383 8.6E-67 T 14-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 GYO_1422 a94058efc652649e37cbbb443e8906ba 172 Gene3D G3DSA:1.20.1250.20 15 171 3.3E-15 T 14-10-2018 GYO_1422 a94058efc652649e37cbbb443e8906ba 172 SUPERFAMILY SSF103473 49 169 1.7E-16 T 14-10-2018 IPR036259 MFS transporter superfamily GYO_1422 a94058efc652649e37cbbb443e8906ba 172 Pfam PF07690 Major Facilitator Superfamily 50 167 7.4E-12 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 GYO_1707 e907a805b7e27df80a2c1f97f3741270 75 Gene3D G3DSA:3.10.350.10 26 75 7.5E-18 T 14-10-2018 IPR036779 LysM domain superfamily GYO_1707 e907a805b7e27df80a2c1f97f3741270 75 SMART SM00257 30 73 3.9E-17 T 14-10-2018 IPR018392 LysM domain GYO_1707 e907a805b7e27df80a2c1f97f3741270 75 Pfam PF01476 LysM domain 31 72 1.5E-18 T 14-10-2018 IPR018392 LysM domain GYO_1707 e907a805b7e27df80a2c1f97f3741270 75 SUPERFAMILY SSF54106 29 72 2.75E-13 T 14-10-2018 GYO_3605 009de637c0889689272b216bc03ae03f 225 SUPERFAMILY SSF52172 3 130 1.2E-31 T 14-10-2018 IPR011006 CheY-like superfamily GYO_3605 009de637c0889689272b216bc03ae03f 225 Gene3D G3DSA:1.10.10.10 130 225 6.6E-24 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily GYO_3605 009de637c0889689272b216bc03ae03f 225 Pfam PF00486 Transcriptional regulatory protein, C terminal 154 222 1.7E-20 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 GYO_3605 009de637c0889689272b216bc03ae03f 225 SMART SM00448 3 113 1.7E-33 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 GYO_3605 009de637c0889689272b216bc03ae03f 225 Gene3D G3DSA:3.40.50.2300 2 129 1.5E-30 T 14-10-2018 GYO_3605 009de637c0889689272b216bc03ae03f 225 Pfam PF00072 Response regulator receiver domain 5 113 1.4E-24 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 GYO_3605 009de637c0889689272b216bc03ae03f 225 SMART SM00862 151 222 1.3E-19 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 GYO_3605 009de637c0889689272b216bc03ae03f 225 SUPERFAMILY SSF46894 126 223 9.64E-23 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 GYO_1484 a9c43bc1486c64425deb548eaf8afaaf 118 Pfam PF07098 Protein of unknown function (DUF1360) 10 111 1.8E-37 T 14-10-2018 IPR010773 Mycobacterium phage PG1, Gp7 GYO_0966 8fb88e420e897b7a9009785eb2b5aff5 612 SUPERFAMILY SSF69318 103 376 4.05E-16 T 14-10-2018 GYO_0966 8fb88e420e897b7a9009785eb2b5aff5 612 Gene3D G3DSA:2.60.40.10 1 93 4.5E-33 T 14-10-2018 IPR013783 Immunoglobulin-like fold GYO_0966 8fb88e420e897b7a9009785eb2b5aff5 612 Pfam PF01839 FG-GAP repeat 330 356 6.0E-5 T 14-10-2018 IPR013517 FG-GAP repeat Reactome: R-HSA-216083 GYO_1424 6fd1bf15ce987ab508336902ec3d1863 406 Pfam PF01960 ArgJ family 24 406 2.3E-147 T 14-10-2018 IPR002813 Arginine biosynthesis protein ArgJ GO:0004358|GO:0006526 KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154 GYO_1424 6fd1bf15ce987ab508336902ec3d1863 406 Gene3D G3DSA:3.60.70.12 6 192 4.8E-67 T 14-10-2018 IPR016117 ArgJ-like domain superfamily KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154 GYO_1424 6fd1bf15ce987ab508336902ec3d1863 406 ProDom PD004193 ACETYLTRANSFERASE ORNITHINE ARGININE BIOSYNTHESIS ARGJ GLUTAMATE N-ACETYLTRANSFERASE TRANSFERASE ACYLTRANSFERASE BIFUNCTIONAL 35 406 0.0 T 14-10-2018 GYO_1424 6fd1bf15ce987ab508336902ec3d1863 406 TIGRFAM TIGR00120 ArgJ: glutamate N-acetyltransferase/amino-acid acetyltransferase 12 406 2.3E-182 T 14-10-2018 IPR002813 Arginine biosynthesis protein ArgJ GO:0004358|GO:0006526 KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154 GYO_1424 6fd1bf15ce987ab508336902ec3d1863 406 Gene3D G3DSA:3.30.2330.10 193 277 1.8E-32 T 14-10-2018 GYO_1424 6fd1bf15ce987ab508336902ec3d1863 406 SUPERFAMILY SSF56266 19 402 5.1E-136 T 14-10-2018 IPR016117 ArgJ-like domain superfamily KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154 GYO_1424 6fd1bf15ce987ab508336902ec3d1863 406 Gene3D G3DSA:3.10.20.340 278 406 4.4E-45 T 14-10-2018 GYO_1424 6fd1bf15ce987ab508336902ec3d1863 406 Hamap MF_01106 Arginine biosynthesis bifunctional protein ArgJ [argJ]. 1 406 143.141 T 14-10-2018 IPR002813 Arginine biosynthesis protein ArgJ GO:0004358|GO:0006526 KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154 GYO_3762 06d34e234fa9e74e7fe2d9cd283f4b20 344 SUPERFAMILY SSF53448 3 219 1.41E-58 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases GYO_3762 06d34e234fa9e74e7fe2d9cd283f4b20 344 Pfam PF00535 Glycosyl transferase family 2 6 144 3.2E-37 T 14-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 GYO_3762 06d34e234fa9e74e7fe2d9cd283f4b20 344 Gene3D G3DSA:3.90.550.10 1 205 2.3E-57 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases GYO_3262 e9b436b612404c7c3e1d38880af88203 767 SMART SM00342 678 761 3.0E-32 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 GYO_3262 e9b436b612404c7c3e1d38880af88203 767 SUPERFAMILY SSF103190 202 259 5.89E-5 T 14-10-2018 IPR029151 Periplasmic sensor-like domain superfamily GYO_3262 e9b436b612404c7c3e1d38880af88203 767 SUPERFAMILY SSF46689 714 764 8.96E-11 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 GYO_3262 e9b436b612404c7c3e1d38880af88203 767 Gene3D G3DSA:3.30.450.20 186 297 3.2E-7 T 14-10-2018 GYO_3262 e9b436b612404c7c3e1d38880af88203 767 SUPERFAMILY SSF46689 666 711 6.9E-8 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 GYO_3262 e9b436b612404c7c3e1d38880af88203 767 Gene3D G3DSA:1.10.10.60 711 766 6.0E-15 T 14-10-2018 GYO_3262 e9b436b612404c7c3e1d38880af88203 767 Pfam PF12833 Helix-turn-helix domain 684 763 2.8E-20 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 GYO_3262 e9b436b612404c7c3e1d38880af88203 767 Gene3D G3DSA:1.10.10.60 659 710 3.9E-17 T 14-10-2018 GYO_2506 3580e5606eebab23e2dfc7b8be44faa7 190 Pfam PF01227 GTP cyclohydrolase I 9 186 9.6E-82 T 14-10-2018 IPR020602 GTP cyclohydrolase I domain KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 GYO_2506 3580e5606eebab23e2dfc7b8be44faa7 190 Hamap MF_00223 GTP cyclohydrolase 1 [folE]. 5 187 42.884 T 14-10-2018 IPR001474 GTP cyclohydrolase I GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 GYO_2506 3580e5606eebab23e2dfc7b8be44faa7 190 TIGRFAM TIGR00063 folE: GTP cyclohydrolase I 9 188 2.4E-86 T 14-10-2018 IPR001474 GTP cyclohydrolase I GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 GYO_2506 3580e5606eebab23e2dfc7b8be44faa7 190 Gene3D G3DSA:3.30.1130.10 55 189 1.4E-60 T 14-10-2018 GYO_2506 3580e5606eebab23e2dfc7b8be44faa7 190 Gene3D G3DSA:1.10.286.10 1 54 7.6E-26 T 14-10-2018 GYO_2506 3580e5606eebab23e2dfc7b8be44faa7 190 ProSitePatterns PS00860 GTP cyclohydrolase I signature 2. 114 124 - T 14-10-2018 IPR018234 GTP cyclohydrolase I, conserved site GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 GYO_2506 3580e5606eebab23e2dfc7b8be44faa7 190 ProSitePatterns PS00859 GTP cyclohydrolase I signature 1. 65 81 - T 14-10-2018 IPR018234 GTP cyclohydrolase I, conserved site GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 GYO_2506 3580e5606eebab23e2dfc7b8be44faa7 190 SUPERFAMILY SSF55620 3 188 3.11E-80 T 14-10-2018 GYO_0651 fc16922a853a2fc61e277d3cc3dae42d 131 Pfam PF00293 NUDIX domain 2 116 2.4E-22 T 14-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 GYO_0651 fc16922a853a2fc61e277d3cc3dae42d 131 Gene3D G3DSA:3.90.79.10 5 127 1.7E-30 T 14-10-2018 GYO_0651 fc16922a853a2fc61e277d3cc3dae42d 131 SUPERFAMILY SSF55811 4 123 3.38E-31 T 14-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 GYO_0651 fc16922a853a2fc61e277d3cc3dae42d 131 ProSitePatterns PS00893 Nudix box signature. 33 54 - T 14-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 GYO_0651 fc16922a853a2fc61e277d3cc3dae42d 131 PRINTS PR00502 NUDIX hydrolase family signature 42 57 6.3E-9 T 14-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 GYO_0651 fc16922a853a2fc61e277d3cc3dae42d 131 PRINTS PR00502 NUDIX hydrolase family signature 28 42 6.3E-9 T 14-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 GYO_3692 187d023bd56331de9ca4634364b0dc49 165 Gene3D G3DSA:2.170.150.60 53 165 1.9E-62 T 14-10-2018 GYO_1286 53f4c640332b165d7bf7ab05e81cb421 70 Pfam PF14147 Sporulation protein YhaL 4 55 2.0E-29 T 14-10-2018 IPR025428 Sporulation protein YhaL GYO_1241 188f3e397616a4346950b5059e14499b 163 Pfam PF04542 Sigma-70 region 2 6 72 4.7E-19 T 14-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 GYO_1241 188f3e397616a4346950b5059e14499b 163 SUPERFAMILY SSF88946 4 81 4.71E-22 T 14-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 GYO_1241 188f3e397616a4346950b5059e14499b 163 Gene3D G3DSA:1.10.10.10 96 158 7.5E-15 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily GYO_1241 188f3e397616a4346950b5059e14499b 163 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 3 153 8.3E-30 T 14-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 GYO_1241 188f3e397616a4346950b5059e14499b 163 Gene3D G3DSA:1.10.1740.10 2 74 6.3E-22 T 14-10-2018 GYO_1241 188f3e397616a4346950b5059e14499b 163 TIGRFAM TIGR02950 SigM_subfam: RNA polymerase sigma factor, SigM family 2 156 6.7E-71 T 14-10-2018 IPR014296 RNA polymerase sigma-M, bacillaceae GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 GYO_1241 188f3e397616a4346950b5059e14499b 163 SUPERFAMILY SSF88659 93 156 6.35E-14 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like GYO_1241 188f3e397616a4346950b5059e14499b 163 ProSitePatterns PS01063 Sigma-70 factors ECF subfamily signature. 28 58 - T 14-10-2018 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 GYO_1241 188f3e397616a4346950b5059e14499b 163 Pfam PF08281 Sigma-70, region 4 105 152 4.6E-12 T 14-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 GYO_3202 b0849450ef97c25ba9c1df8bf15608d5 529 Pfam PF13193 AMP-binding enzyme C-terminal domain 432 510 4.1E-22 T 14-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain GYO_3202 b0849450ef97c25ba9c1df8bf15608d5 529 ProSitePatterns PS00455 Putative AMP-binding domain signature. 175 186 - T 14-10-2018 IPR020845 AMP-binding, conserved site GYO_3202 b0849450ef97c25ba9c1df8bf15608d5 529 Gene3D G3DSA:3.30.300.310 419 526 5.8E-29 T 14-10-2018 GYO_3202 b0849450ef97c25ba9c1df8bf15608d5 529 Gene3D G3DSA:3.40.50.12780 4 416 2.4E-110 T 14-10-2018 GYO_3202 b0849450ef97c25ba9c1df8bf15608d5 529 SUPERFAMILY SSF56801 24 522 1.44E-137 T 14-10-2018 GYO_3202 b0849450ef97c25ba9c1df8bf15608d5 529 Pfam PF00501 AMP-binding enzyme 26 423 1.1E-80 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 GYO_1057 15d90555e2541a4f90ae3fb086e56676 275 TIGRFAM TIGR00765 yihY_not_rbn: YihY family inner membrane protein 2 264 1.0E-89 T 14-10-2018 IPR017039 Virulence factor BrkB GYO_1057 15d90555e2541a4f90ae3fb086e56676 275 PIRSF PIRSF035875 1 274 2.1E-85 T 14-10-2018 IPR017039 Virulence factor BrkB GYO_1057 15d90555e2541a4f90ae3fb086e56676 275 Pfam PF03631 Virulence factor BrkB 14 265 8.3E-71 T 14-10-2018 IPR017039 Virulence factor BrkB GYO_1213 f4090e9aff0d858657a435cb79aac21c 304 Gene3D G3DSA:1.20.1530.20 158 303 1.6E-6 T 14-10-2018 IPR038770 Sodium/solute symporter superfamily GYO_1213 f4090e9aff0d858657a435cb79aac21c 304 Pfam PF03547 Membrane transport protein 7 139 4.1E-10 T 14-10-2018 IPR004776 Membrane transport protein GO:0016021|GO:0055085 GYO_1213 f4090e9aff0d858657a435cb79aac21c 304 Pfam PF03547 Membrane transport protein 151 295 1.4E-19 T 14-10-2018 IPR004776 Membrane transport protein GO:0016021|GO:0055085 GYO_3223 b3c8eae1c25fedaf88a6c084d124886f 358 Pfam PF01817 Chorismate mutase type II 10 87 3.7E-17 T 14-10-2018 IPR002701 Chorismate mutase II, prokaryotic-type GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 GYO_3223 b3c8eae1c25fedaf88a6c084d124886f 358 Gene3D G3DSA:1.20.59.10 8 92 2.7E-27 T 14-10-2018 IPR036979 Chorismate mutase domain superfamily GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 GYO_3223 b3c8eae1c25fedaf88a6c084d124886f 358 TIGRFAM TIGR01361 DAHP_synth_Bsub: 3-deoxy-7-phosphoheptulonate synthase 95 351 2.7E-121 T 14-10-2018 IPR006268 Phospho-2-dehydro-3-deoxyheptonate aldolase, subtype 2 GO:0009073|GO:0016832 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 GYO_3223 b3c8eae1c25fedaf88a6c084d124886f 358 SMART SM00830 10 89 9.4E-20 T 14-10-2018 IPR002701 Chorismate mutase II, prokaryotic-type GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 GYO_3223 b3c8eae1c25fedaf88a6c084d124886f 358 Pfam PF00793 DAHP synthetase I family 110 354 4.4E-85 T 14-10-2018 IPR006218 DAHP synthetase I/KDSA GO:0009058 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 GYO_3223 b3c8eae1c25fedaf88a6c084d124886f 358 SUPERFAMILY SSF51569 30 353 2.29E-103 T 14-10-2018 GYO_3223 b3c8eae1c25fedaf88a6c084d124886f 358 Gene3D G3DSA:3.20.20.70 93 357 1.6E-103 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 GYO_3223 b3c8eae1c25fedaf88a6c084d124886f 358 TIGRFAM TIGR01801 CM_A: chorismate mutase 1 102 2.9E-51 T 14-10-2018 IPR010954 Chorismate mutase, Firmicutes/Deinococcus KEGG: 00400+2.5.1.54+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6164|MetaCyc: PWY-6627|MetaCyc: PWY-7626 GYO_2646 eaf430c67fe27669eac85602bf50fc02 389 Gene3D G3DSA:1.20.1250.20 2 381 6.6E-73 T 14-10-2018 GYO_2646 eaf430c67fe27669eac85602bf50fc02 389 PRINTS PR01035 Tetracycline resistance protein signature 17 33 3.1E-18 T 14-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 GYO_2646 eaf430c67fe27669eac85602bf50fc02 389 PRINTS PR01035 Tetracycline resistance protein signature 132 154 3.1E-18 T 14-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 GYO_2646 eaf430c67fe27669eac85602bf50fc02 389 PRINTS PR01035 Tetracycline resistance protein signature 160 180 3.1E-18 T 14-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 GYO_2646 eaf430c67fe27669eac85602bf50fc02 389 PRINTS PR01035 Tetracycline resistance protein signature 331 354 3.1E-18 T 14-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 GYO_2646 eaf430c67fe27669eac85602bf50fc02 389 ProSitePatterns PS00216 Sugar transport proteins signature 1. 61 77 - T 14-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 GYO_2646 eaf430c67fe27669eac85602bf50fc02 389 SUPERFAMILY SSF103473 3 380 3.66E-68 T 14-10-2018 IPR036259 MFS transporter superfamily GYO_2646 eaf430c67fe27669eac85602bf50fc02 389 Pfam PF07690 Major Facilitator Superfamily 12 338 4.2E-49 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 GYO_3777 035af993d5742bfc6977c9741fdf84df 227 ProSitePatterns PS00923 Aspartate and glutamate racemases signature 1. 79 87 - T 14-10-2018 IPR018187 Asp/Glu racemase, active site 1 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 GYO_3777 035af993d5742bfc6977c9741fdf84df 227 SUPERFAMILY SSF53681 116 222 5.4E-19 T 14-10-2018 IPR001920 Asp/Glu racemase GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 GYO_3777 035af993d5742bfc6977c9741fdf84df 227 Gene3D G3DSA:3.40.50.1860 2 216 2.2E-54 T 14-10-2018 GYO_3777 035af993d5742bfc6977c9741fdf84df 227 SUPERFAMILY SSF53681 1 111 5.72E-27 T 14-10-2018 IPR001920 Asp/Glu racemase GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 GYO_3777 035af993d5742bfc6977c9741fdf84df 227 Pfam PF01177 Asp/Glu/Hydantoin racemase 5 219 2.8E-39 T 14-10-2018 IPR015942 Asp/Glu/hydantoin racemase GO:0006807|GO:0036361 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 GYO_3777 035af993d5742bfc6977c9741fdf84df 227 Gene3D G3DSA:3.40.50.1860 105 210 2.2E-54 T 14-10-2018 GYO_3777 035af993d5742bfc6977c9741fdf84df 227 TIGRFAM TIGR00035 asp_race: aspartate racemase 1 224 1.5E-37 T 14-10-2018 IPR004380 Aspartate racemase GO:0006520|GO:0016855 GYO_3777 035af993d5742bfc6977c9741fdf84df 227 ProSitePatterns PS00924 Aspartate and glutamate racemases signature 2. 187 197 - T 14-10-2018 IPR033134 Asp/Glu racemase, active site 2 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 GYO_4253 41d7684eba57ce5d45fa46e5528f94aa 78 SUPERFAMILY SSF47336 2 76 1.44E-14 T 14-10-2018 IPR036736 ACP-like superfamily GYO_4253 41d7684eba57ce5d45fa46e5528f94aa 78 Pfam PF00550 Phosphopantetheine attachment site 5 73 6.9E-9 T 14-10-2018 IPR009081 Phosphopantetheine binding ACP domain GYO_4253 41d7684eba57ce5d45fa46e5528f94aa 78 Gene3D G3DSA:1.10.1200.10 1 78 1.9E-26 T 14-10-2018 IPR036736 ACP-like superfamily GYO_4253 41d7684eba57ce5d45fa46e5528f94aa 78 TIGRFAM TIGR01688 dltC: D-alanine--poly(phosphoribitol) ligase, subunit 2 4 76 7.6E-43 T 14-10-2018 IPR003230 D-alanyl carrier protein GO:0019350|GO:0036370 GYO_4253 41d7684eba57ce5d45fa46e5528f94aa 78 Hamap MF_00565 D-alanyl carrier protein [dltC]. 1 78 49.735 T 14-10-2018 IPR003230 D-alanyl carrier protein GO:0019350|GO:0036370 GYO_0022 01cc1e66f590c524955ecdb89cc3e882 181 Pfam PF00857 Isochorismatase family 6 174 1.2E-31 T 14-10-2018 IPR000868 Isochorismatase-like GO:0003824 GYO_0022 01cc1e66f590c524955ecdb89cc3e882 181 SUPERFAMILY SSF52499 3 179 8.63E-46 T 14-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 GYO_0022 01cc1e66f590c524955ecdb89cc3e882 181 Gene3D G3DSA:3.40.50.850 1 181 5.0E-45 T 14-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 GYO_0110 05d4050887ea2c1104922a3811c6ef57 185 SUPERFAMILY SSF46600 139 174 9.94E-6 T 14-10-2018 IPR036876 UVR domain superfamily GYO_0110 05d4050887ea2c1104922a3811c6ef57 185 PIRSF PIRSF015034 1 182 1.6E-77 T 14-10-2018 IPR025542 YacH protein GYO_0110 05d4050887ea2c1104922a3811c6ef57 185 Pfam PF02151 UvrB/uvrC motif 141 173 1.6E-5 T 14-10-2018 IPR001943 UVR domain GO:0005515 GYO_1284 6c431d27b844613c6f4badf5500d6372 962 Gene3D G3DSA:3.40.50.300 1 261 2.6E-17 T 14-10-2018 GYO_1284 6c431d27b844613c6f4badf5500d6372 962 Gene3D G3DSA:3.40.50.300 713 961 4.2E-17 T 14-10-2018 GYO_1284 6c431d27b844613c6f4badf5500d6372 962 SUPERFAMILY SSF52540 1 960 3.35E-17 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase GYO_1284 6c431d27b844613c6f4badf5500d6372 962 Pfam PF13514 AAA domain 2 200 1.3E-28 T 14-10-2018 IPR038734 Uncharacterized protein YhaN, AAA domain GYO_0190 693c09e618d2c02bf555ebe24d2bcf32 177 Pfam PF06114 IrrE N-terminal-like domain 53 146 5.8E-11 T 14-10-2018 IPR010359 IrrE N-terminal-like domain GYO_0269 693c09e618d2c02bf555ebe24d2bcf32 177 Pfam PF06114 IrrE N-terminal-like domain 53 146 5.8E-11 T 14-10-2018 IPR010359 IrrE N-terminal-like domain GYO_1133 087073b31eefaeab5672787310c7afb7 250 SUPERFAMILY SSF51735 3 248 2.49E-76 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily GYO_1133 087073b31eefaeab5672787310c7afb7 250 Gene3D G3DSA:3.40.50.720 1 250 2.7E-78 T 14-10-2018 GYO_1133 087073b31eefaeab5672787310c7afb7 250 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 81 92 7.1E-7 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR GYO_1133 087073b31eefaeab5672787310c7afb7 250 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 134 142 7.1E-7 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR GYO_1133 087073b31eefaeab5672787310c7afb7 250 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 154 173 7.1E-7 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR GYO_1133 087073b31eefaeab5672787310c7afb7 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 210 230 2.6E-30 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR GYO_1133 087073b31eefaeab5672787310c7afb7 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 154 173 2.6E-30 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR GYO_1133 087073b31eefaeab5672787310c7afb7 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 6 23 2.6E-30 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR GYO_1133 087073b31eefaeab5672787310c7afb7 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 175 192 2.6E-30 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR GYO_1133 087073b31eefaeab5672787310c7afb7 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 128 144 2.6E-30 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR GYO_1133 087073b31eefaeab5672787310c7afb7 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 81 92 2.6E-30 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR GYO_1133 087073b31eefaeab5672787310c7afb7 250 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 11 245 2.8E-64 T 14-10-2018 GYO_2606 8c00e5e487ddbcd55d6ee80648a7981b 107 Pfam PF01521 Iron-sulphur cluster biosynthesis 1 104 5.7E-24 T 14-10-2018 IPR000361 FeS cluster biogenesis Reactome: R-HSA-1362409 GYO_2606 8c00e5e487ddbcd55d6ee80648a7981b 107 Gene3D G3DSA:2.60.300.12 53 106 2.1E-5 T 14-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 GYO_2606 8c00e5e487ddbcd55d6ee80648a7981b 107 SUPERFAMILY SSF89360 1 105 6.8E-25 T 14-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 GYO_1382 957edb196139e084d62111d72c31165a 894 Gene3D G3DSA:3.40.50.200 412 735 7.4E-82 T 14-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 GYO_1382 957edb196139e084d62111d72c31165a 894 SUPERFAMILY SSF52743 455 731 2.75E-83 T 14-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 GYO_1382 957edb196139e084d62111d72c31165a 894 ProSitePatterns PS00137 Serine proteases, subtilase family, histidine active site. 497 507 - T 14-10-2018 IPR022398 Peptidase S8, subtilisin, His-active site GYO_1382 957edb196139e084d62111d72c31165a 894 ProSitePatterns PS00138 Serine proteases, subtilase family, serine active site. 648 658 - T 14-10-2018 IPR023828 Peptidase S8, subtilisin, Ser-active site GYO_1382 957edb196139e084d62111d72c31165a 894 Pfam PF00082 Subtilase family 455 693 3.2E-45 T 14-10-2018 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 GYO_1382 957edb196139e084d62111d72c31165a 894 PRINTS PR00723 Subtilisin serine protease family (S8) signature 453 472 3.3E-13 T 14-10-2018 IPR015500 Peptidase S8, subtilisin-related GYO_1382 957edb196139e084d62111d72c31165a 894 PRINTS PR00723 Subtilisin serine protease family (S8) signature 493 506 3.3E-13 T 14-10-2018 IPR015500 Peptidase S8, subtilisin-related GYO_1382 957edb196139e084d62111d72c31165a 894 PRINTS PR00723 Subtilisin serine protease family (S8) signature 647 663 3.3E-13 T 14-10-2018 IPR015500 Peptidase S8, subtilisin-related GYO_2006 21e7614c23b4cc61773d625e8e971df8 240 Pfam PF00696 Amino acid kinase family 7 217 8.8E-29 T 14-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 GYO_2006 21e7614c23b4cc61773d625e8e971df8 240 TIGRFAM TIGR02075 pyrH_bact: UMP kinase 6 237 5.4E-103 T 14-10-2018 IPR015963 Uridylate kinase, bacteria GO:0005737|GO:0006221|GO:0033862 KEGG: 00240+2.7.4.22 GYO_2006 21e7614c23b4cc61773d625e8e971df8 240 Gene3D G3DSA:3.40.1160.10 1 239 2.9E-81 T 14-10-2018 IPR036393 Acetylglutamate kinase-like superfamily GYO_2006 21e7614c23b4cc61773d625e8e971df8 240 Hamap MF_01220_B Uridylate kinase [pyrH]. 4 238 45.215 T 14-10-2018 IPR015963 Uridylate kinase, bacteria GO:0005737|GO:0006221|GO:0033862 KEGG: 00240+2.7.4.22 GYO_2006 21e7614c23b4cc61773d625e8e971df8 240 SUPERFAMILY SSF53633 4 238 3.93E-74 T 14-10-2018 IPR036393 Acetylglutamate kinase-like superfamily GYO_2006 21e7614c23b4cc61773d625e8e971df8 240 PIRSF PIRSF005650 1 240 6.7E-98 T 14-10-2018 IPR011817 Uridylate kinase GO:0006221|GO:0009041 KEGG: 00240+2.7.4.22 GYO_1137 3e3769527021296100306fcbcf884ea3 580 SUPERFAMILY SSF90123 5 327 1.01E-80 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 GYO_1137 3e3769527021296100306fcbcf884ea3 580 Pfam PF00005 ABC transporter 358 507 4.0E-35 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 GYO_1137 3e3769527021296100306fcbcf884ea3 580 SUPERFAMILY SSF52540 330 577 9.03E-97 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase GYO_1137 3e3769527021296100306fcbcf884ea3 580 ProSitePatterns PS00211 ABC transporters family signature. 479 493 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 GYO_1137 3e3769527021296100306fcbcf884ea3 580 Gene3D G3DSA:1.20.1560.10 3 323 9.6E-109 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 GYO_1137 3e3769527021296100306fcbcf884ea3 580 Pfam PF00664 ABC transporter transmembrane region 20 289 4.0E-46 T 14-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 GYO_1137 3e3769527021296100306fcbcf884ea3 580 Gene3D G3DSA:3.40.50.300 331 580 1.7E-93 T 14-10-2018 GYO_1137 3e3769527021296100306fcbcf884ea3 580 SMART SM00382 367 553 5.3E-15 T 14-10-2018 IPR003593 AAA+ ATPase domain GYO_2786 7643735ff6367d0dad7d38656b7f3cbc 603 TIGRFAM TIGR01391 dnaG: DNA primase 4 420 3.5E-151 T 14-10-2018 IPR006295 DNA primase, DnaG GO:0003896|GO:0006269 GYO_2786 7643735ff6367d0dad7d38656b7f3cbc 603 Gene3D G3DSA:1.10.860.10 467 563 5.1E-32 T 14-10-2018 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal GYO_2786 7643735ff6367d0dad7d38656b7f3cbc 603 Pfam PF01807 CHC2 zinc finger 6 99 8.9E-40 T 14-10-2018 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 GYO_2786 7643735ff6367d0dad7d38656b7f3cbc 603 Hamap MF_00974 DNA primase [dnaG]. 4 593 30.419 T 14-10-2018 IPR030846 DNA primase DnaG, bacteria GO:0003896|GO:0006269|GO:0008270 GYO_2786 7643735ff6367d0dad7d38656b7f3cbc 603 SUPERFAMILY SSF48024 463 563 3.01E-7 T 14-10-2018 IPR036185 DNA helicase, DnaB-like, N-terminal domain superfamily GO:0003678|GO:0005524|GO:0006260 GYO_2786 7643735ff6367d0dad7d38656b7f3cbc 603 SMART SM00493 262 333 5.2E-17 T 14-10-2018 IPR006171 TOPRIM domain GYO_2786 7643735ff6367d0dad7d38656b7f3cbc 603 SUPERFAMILY SSF56731 117 427 6.93E-104 T 14-10-2018 GYO_2786 7643735ff6367d0dad7d38656b7f3cbc 603 Gene3D G3DSA:3.40.1360.10 244 368 9.0E-39 T 14-10-2018 GYO_2786 7643735ff6367d0dad7d38656b7f3cbc 603 Pfam PF13155 Toprim-like 265 350 2.5E-19 T 14-10-2018 GYO_2786 7643735ff6367d0dad7d38656b7f3cbc 603 SUPERFAMILY SSF57783 4 98 4.76E-36 T 14-10-2018 GYO_2786 7643735ff6367d0dad7d38656b7f3cbc 603 Gene3D G3DSA:3.90.580.10 1 101 1.8E-41 T 14-10-2018 IPR036977 DNA Primase, CHC2-type zinc finger GO:0003677|GO:0006260|GO:0008270 GYO_2786 7643735ff6367d0dad7d38656b7f3cbc 603 Pfam PF10410 DnaB-helicase binding domain of primase 371 425 1.1E-10 T 14-10-2018 IPR019475 DNA primase, DnaB-helicase binding domain GO:0016779 GYO_2786 7643735ff6367d0dad7d38656b7f3cbc 603 PIRSF PIRSF002811 2 603 1.6E-207 T 14-10-2018 IPR030846 DNA primase DnaG, bacteria GO:0003896|GO:0006269|GO:0008270 GYO_2786 7643735ff6367d0dad7d38656b7f3cbc 603 Gene3D G3DSA:3.90.980.10 112 243 1.0E-54 T 14-10-2018 IPR037068 DNA primase, catalytic core, N-terminal domain superfamily GYO_2786 7643735ff6367d0dad7d38656b7f3cbc 603 Pfam PF08275 DNA primase catalytic core, N-terminal domain 128 255 2.8E-46 T 14-10-2018 IPR013264 DNA primase, catalytic core, N-terminal GYO_2786 7643735ff6367d0dad7d38656b7f3cbc 603 SMART SM00400 36 90 5.4E-36 T 14-10-2018 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 GYO_3786 bee1e486890481fa9ca445100a107b7f 170 Pfam PF11553 Protein of unknown function (DUF3231) 2 167 9.6E-38 T 14-10-2018 IPR021617 Protein of unknown function DUF3231 GYO_3786 bee1e486890481fa9ca445100a107b7f 170 Gene3D G3DSA:1.20.1260.10 1 156 4.6E-61 T 14-10-2018 IPR012347 Ferritin-like GYO_4514 09d6c5e1701c1a010460c9264ce469f8 283 TIGRFAM TIGR04285 nucleoid_noc: nucleoid occlusion protein 29 283 1.7E-112 T 14-10-2018 IPR023705 Nucleoid occlusion protein GYO_4514 09d6c5e1701c1a010460c9264ce469f8 283 SMART SM00470 31 122 3.3E-36 T 14-10-2018 IPR003115 ParB/Sulfiredoxin GYO_4514 09d6c5e1701c1a010460c9264ce469f8 283 SUPERFAMILY SSF109709 116 221 3.66E-33 T 14-10-2018 GYO_4514 09d6c5e1701c1a010460c9264ce469f8 283 SUPERFAMILY SSF110849 23 125 1.7E-28 T 14-10-2018 IPR036086 ParB/Sulfiredoxin superfamily GYO_4514 09d6c5e1701c1a010460c9264ce469f8 283 Pfam PF02195 ParB-like nuclease domain 32 121 4.3E-28 T 14-10-2018 IPR003115 ParB/Sulfiredoxin GYO_4514 09d6c5e1701c1a010460c9264ce469f8 283 Gene3D G3DSA:1.10.10.2830 109 222 1.2E-35 T 14-10-2018 GYO_4514 09d6c5e1701c1a010460c9264ce469f8 283 Gene3D G3DSA:3.90.1530.30 44 108 1.3E-24 T 14-10-2018 GYO_4514 09d6c5e1701c1a010460c9264ce469f8 283 Hamap MF_02015 Nucleoid occlusion protein [noc]. 3 283 39.302 T 14-10-2018 IPR023705 Nucleoid occlusion protein GYO_4514 09d6c5e1701c1a010460c9264ce469f8 283 TIGRFAM TIGR00180 parB_part: ParB/RepB/Spo0J family partition protein 27 208 8.8E-66 T 14-10-2018 IPR004437 ParB/RepB/Spo0J partition protein family GO:0003677 GYO_0590 0985438350bf778d3198cacf6db7b277 488 Pfam PF12704 MacB-like periplasmic core domain 104 258 5.8E-9 T 14-10-2018 IPR025857 MacB-like periplasmic core domain GYO_0590 0985438350bf778d3198cacf6db7b277 488 Pfam PF02687 FtsX-like permease family 350 480 9.0E-15 T 14-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 GYO_2788 440960871e136aea1b54b8843037d000 270 Hamap MF_00921 Putative pyruvate, phosphate dikinase regulatory protein. 4 268 60.609 T 14-10-2018 IPR026565 Putative pyruvate, phosphate dikinase regulatory protein GYO_2788 440960871e136aea1b54b8843037d000 270 Pfam PF03618 Kinase/pyrophosphorylase 6 262 4.9E-96 T 14-10-2018 IPR005177 Bifunctional kinase-pyrophosphorylase GO:0005524|GO:0016772 GYO_2276 84276d1ccdebfd6c1c7105db53e7dedf 100 Gene3D G3DSA:1.25.40.10 1 96 2.6E-12 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 GYO_2276 84276d1ccdebfd6c1c7105db53e7dedf 100 SUPERFAMILY SSF48452 3 63 4.17E-8 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 GYO_4278 7fde26ad93893e0fb80254c8f384f45e 450 PIRSF PIRSF005348 13 450 1.0E-167 T 14-10-2018 IPR004679 2-hydroxycarboxylate transporter GO:0008514|GO:0015711|GO:0016021 GYO_4278 7fde26ad93893e0fb80254c8f384f45e 450 TIGRFAM TIGR00783 ccs: citrate carrier protein, CCS family 27 444 4.2E-173 T 14-10-2018 IPR018025 2-hydroxycarboxylate transporter, Proteobacteria/Firmicutes GYO_4278 7fde26ad93893e0fb80254c8f384f45e 450 Pfam PF03390 2-hydroxycarboxylate transporter family 34 443 2.8E-151 T 14-10-2018 IPR004679 2-hydroxycarboxylate transporter GO:0008514|GO:0015711|GO:0016021 GYO_1221 724917b0bbecedef73b3f4625ebf7278 215 Pfam PF00196 Bacterial regulatory proteins, luxR family 149 204 2.4E-23 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 GYO_1221 724917b0bbecedef73b3f4625ebf7278 215 ProSitePatterns PS00622 LuxR-type HTH domain signature. 164 191 - T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 GYO_1221 724917b0bbecedef73b3f4625ebf7278 215 SUPERFAMILY SSF46894 131 209 1.7E-22 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 GYO_1221 724917b0bbecedef73b3f4625ebf7278 215 SMART SM00448 1 114 1.4E-32 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 GYO_1221 724917b0bbecedef73b3f4625ebf7278 215 Pfam PF00072 Response regulator receiver domain 3 114 4.3E-27 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 GYO_1221 724917b0bbecedef73b3f4625ebf7278 215 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 180 192 8.2E-16 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 GYO_1221 724917b0bbecedef73b3f4625ebf7278 215 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 164 180 8.2E-16 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 GYO_1221 724917b0bbecedef73b3f4625ebf7278 215 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 150 164 8.2E-16 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 GYO_1221 724917b0bbecedef73b3f4625ebf7278 215 Gene3D G3DSA:3.40.50.12740 1 209 1.9E-73 T 14-10-2018 GYO_1221 724917b0bbecedef73b3f4625ebf7278 215 SMART SM00421 147 204 7.5E-28 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 GYO_1221 724917b0bbecedef73b3f4625ebf7278 215 SUPERFAMILY SSF52172 1 131 6.12E-35 T 14-10-2018 IPR011006 CheY-like superfamily GYO_0910 120cd16081ff20dca075517b591872f3 346 Pfam PF00586 AIR synthase related protein, N-terminal domain 72 161 1.3E-16 T 14-10-2018 IPR016188 PurM-like, N-terminal domain GYO_0910 120cd16081ff20dca075517b591872f3 346 Hamap MF_00741 Phosphoribosylformylglycinamidine cyclo-ligase [purM]. 3 343 48.031 T 14-10-2018 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase GO:0004641|GO:0005737|GO:0006189 KEGG: 00230+6.3.3.1|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 GYO_0910 120cd16081ff20dca075517b591872f3 346 Gene3D G3DSA:3.90.650.10 168 345 4.5E-72 T 14-10-2018 IPR036676 PurM-like, C-terminal domain superfamily GYO_0910 120cd16081ff20dca075517b591872f3 346 TIGRFAM TIGR00878 purM: phosphoribosylformylglycinamidine cyclo-ligase 4 334 2.1E-152 T 14-10-2018 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase GO:0004641|GO:0005737|GO:0006189 KEGG: 00230+6.3.3.1|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 GYO_0910 120cd16081ff20dca075517b591872f3 346 Gene3D G3DSA:3.30.1330.10 1 167 1.3E-67 T 14-10-2018 IPR036921 PurM-like, N-terminal domain superfamily GYO_0910 120cd16081ff20dca075517b591872f3 346 SUPERFAMILY SSF55326 4 166 5.83E-49 T 14-10-2018 IPR036921 PurM-like, N-terminal domain superfamily GYO_0910 120cd16081ff20dca075517b591872f3 346 SUPERFAMILY SSF56042 168 338 1.06E-59 T 14-10-2018 IPR036676 PurM-like, C-terminal domain superfamily GYO_0910 120cd16081ff20dca075517b591872f3 346 Pfam PF02769 AIR synthase related protein, C-terminal domain 173 339 5.5E-38 T 14-10-2018 IPR010918 PurM-like, C-terminal domain GYO_0877 a0e22112031cbdbadb2aa4b592e5dd71 324 Pfam PF13248 zinc-ribbon domain 302 323 1.1E-6 T 14-10-2018 GYO_0877 a0e22112031cbdbadb2aa4b592e5dd71 324 Pfam PF13421 SPFH domain-Band 7 family 28 232 2.8E-44 T 14-10-2018 IPR033880 SPFH domain, YdjI-like GYO_4101 f78bc58d16ff872ff1e1468e946b63ad 174 Pfam PF01872 RibD C-terminal domain 7 169 1.1E-16 T 14-10-2018 IPR002734 Bacterial bifunctional deaminase-reductase, C-terminal GO:0008703|GO:0009231|GO:0055114 GYO_4101 f78bc58d16ff872ff1e1468e946b63ad 174 SUPERFAMILY SSF53597 6 173 1.83E-34 T 14-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 GYO_4101 f78bc58d16ff872ff1e1468e946b63ad 174 Gene3D G3DSA:3.40.430.10 1 174 4.4E-46 T 14-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 GYO_3573 3567af58a51d2b1160eaf41f6935837a 125 Gene3D G3DSA:1.20.1290.10 6 121 1.3E-25 T 14-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 GYO_3573 3567af58a51d2b1160eaf41f6935837a 125 SUPERFAMILY SSF69118 18 121 7.07E-24 T 14-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 GYO_3573 3567af58a51d2b1160eaf41f6935837a 125 Pfam PF02627 Carboxymuconolactone decarboxylase family 32 114 6.7E-17 T 14-10-2018 IPR003779 Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 GYO_0799 27d7a60566c47a02ab989437d253b96f 80 Pfam PF10676 Spore germination protein gerPA/gerPF 1 71 2.9E-21 T 14-10-2018 IPR019618 Spore germination protein GerPA/GerPF GYO_1001 9ea860392e0f341f0e099a0b6ba27047 148 Pfam PF10787 Uncharacterised protein from bacillus cereus group 1 139 2.4E-72 T 14-10-2018 IPR019723 Uncharacterised protein, YfmQ GYO_2421 a9e47852b21851cb570ca828d31830ff 226 SUPERFAMILY SSF53098 73 209 4.17E-20 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily GYO_2421 a9e47852b21851cb570ca828d31830ff 226 Gene3D G3DSA:3.30.420.10 74 217 4.0E-28 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 GYO_2421 a9e47852b21851cb570ca828d31830ff 226 Pfam PF13456 Reverse transcriptase-like 79 204 2.1E-14 T 14-10-2018 IPR002156 Ribonuclease H domain GO:0003676|GO:0004523 GYO_2228 750da2fb7266a365855da0a1cebb5116 330 Pfam PF12698 ABC-2 family transporter protein 20 315 3.9E-8 T 14-10-2018 GYO_1584 eede3d2e6ccffac1d1319315a183894e 219 Gene3D G3DSA:3.10.350.10 159 217 7.0E-15 T 14-10-2018 IPR036779 LysM domain superfamily GYO_1584 eede3d2e6ccffac1d1319315a183894e 219 SUPERFAMILY SSF54106 158 218 5.36E-8 T 14-10-2018 GYO_1584 eede3d2e6ccffac1d1319315a183894e 219 SMART SM00257 160 218 7.7E-10 T 14-10-2018 IPR018392 LysM domain GYO_1584 eede3d2e6ccffac1d1319315a183894e 219 Pfam PF01476 LysM domain 161 218 1.5E-21 T 14-10-2018 IPR018392 LysM domain GYO_0972 f45282637b91eae86a02fb34694c3072 295 Gene3D G3DSA:1.10.3720.10 5 286 1.4E-76 T 14-10-2018 IPR035906 MetI-like superfamily GYO_0972 f45282637b91eae86a02fb34694c3072 295 SUPERFAMILY SSF161098 13 295 1.31E-62 T 14-10-2018 IPR035906 MetI-like superfamily GYO_0972 f45282637b91eae86a02fb34694c3072 295 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 94 288 1.2E-32 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 GYO_0435 b72284b6277a052d8f564aa386822884 235 SUPERFAMILY SSF64288 55 230 5.18E-47 T 14-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily GYO_0435 b72284b6277a052d8f564aa386822884 235 SMART SM00866 87 226 4.4E-35 T 14-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 GYO_0435 b72284b6277a052d8f564aa386822884 235 Gene3D G3DSA:3.40.1410.10 77 234 7.1E-45 T 14-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily GYO_0435 b72284b6277a052d8f564aa386822884 235 SUPERFAMILY SSF46785 4 76 1.33E-20 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily GYO_0435 b72284b6277a052d8f564aa386822884 235 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 27 41 2.0E-9 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 GYO_0435 b72284b6277a052d8f564aa386822884 235 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 41 57 2.0E-9 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 GYO_0435 b72284b6277a052d8f564aa386822884 235 Pfam PF00392 Bacterial regulatory proteins, gntR family 4 67 2.4E-19 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 GYO_0435 b72284b6277a052d8f564aa386822884 235 Gene3D G3DSA:1.10.10.10 1 68 9.7E-24 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily GYO_0435 b72284b6277a052d8f564aa386822884 235 SMART SM00345 8 67 4.3E-20 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 GYO_0435 b72284b6277a052d8f564aa386822884 235 Pfam PF07702 UTRA domain 88 225 2.1E-37 T 14-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 GYO_1779 d9a41fc8864257b240f53b128e025ec2 539 Pfam PF00005 ABC transporter 335 468 2.8E-14 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 GYO_1779 d9a41fc8864257b240f53b128e025ec2 539 SUPERFAMILY SSF52540 296 529 1.7E-37 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase GYO_1779 d9a41fc8864257b240f53b128e025ec2 539 Gene3D G3DSA:3.40.50.300 283 537 2.7E-42 T 14-10-2018 GYO_1779 d9a41fc8864257b240f53b128e025ec2 539 Gene3D G3DSA:3.40.50.300 1 279 3.2E-57 T 14-10-2018 GYO_1779 d9a41fc8864257b240f53b128e025ec2 539 Pfam PF12848 ABC transporter 224 309 1.4E-19 T 14-10-2018 IPR032781 ABC-transporter extension domain GYO_1779 d9a41fc8864257b240f53b128e025ec2 539 SMART SM00382 344 525 1.2 T 14-10-2018 IPR003593 AAA+ ATPase domain GYO_1779 d9a41fc8864257b240f53b128e025ec2 539 SMART SM00382 26 228 6.9E-13 T 14-10-2018 IPR003593 AAA+ ATPase domain GYO_1779 d9a41fc8864257b240f53b128e025ec2 539 Pfam PF00005 ABC transporter 18 184 1.9E-22 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 GYO_1779 d9a41fc8864257b240f53b128e025ec2 539 SUPERFAMILY SSF52540 2 249 1.55E-44 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase GYO_2741 68408789162aeb2bbd73a2c907ab3890 125 TIGRFAM TIGR01617 arsC_related: transcriptional regulator, Spx/MgsR family 5 116 3.8E-43 T 14-10-2018 IPR006504 Transcriptional regulator Spx/MgsR GYO_2741 68408789162aeb2bbd73a2c907ab3890 125 Pfam PF03960 ArsC family 7 114 5.9E-21 T 14-10-2018 IPR006660 Arsenate reductase-like GYO_2741 68408789162aeb2bbd73a2c907ab3890 125 SUPERFAMILY SSF52833 4 115 1.35E-34 T 14-10-2018 IPR036249 Thioredoxin-like superfamily GYO_2741 68408789162aeb2bbd73a2c907ab3890 125 Gene3D G3DSA:3.40.30.10 4 120 1.1E-37 T 14-10-2018 GYO_0840 b43803ca43d2db2d129d13cc757df5e9 110 Gene3D G3DSA:1.20.58.280 5 109 8.3E-35 T 14-10-2018 GYO_0840 b43803ca43d2db2d129d13cc757df5e9 110 SUPERFAMILY SSF46973 9 106 3.14E-33 T 14-10-2018 IPR036542 Phosphotransferase system, lactose/cellobiose-type IIA subunit superfamily GO:0009401 GYO_0840 b43803ca43d2db2d129d13cc757df5e9 110 Pfam PF02255 PTS system, Lactose/Cellobiose specific IIA subunit 13 106 1.3E-32 T 14-10-2018 IPR003188 Phosphotransferase system, lactose/cellobiose-type IIA subunit GO:0009401 GYO_0840 b43803ca43d2db2d129d13cc757df5e9 110 PIRSF PIRSF000699 4 110 6.3E-35 T 14-10-2018 IPR003188 Phosphotransferase system, lactose/cellobiose-type IIA subunit GO:0009401 GYO_2489 2673ee01465c4a4a42f3d45f86824a3b 360 Hamap MF_01023 Histidinol-phosphate aminotransferase [hisC]. 2 360 62.863 T 14-10-2018 IPR005861 Histidinol-phosphate aminotransferase family GO:0000105|GO:0004400 KEGG: 00340+2.6.1.9|KEGG: 00350+2.6.1.9|KEGG: 00360+2.6.1.9|KEGG: 00400+2.6.1.9|KEGG: 00401+2.6.1.9|KEGG: 00960+2.6.1.9 GYO_2489 2673ee01465c4a4a42f3d45f86824a3b 360 Gene3D G3DSA:3.90.1150.10 20 349 3.0E-119 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 GYO_2489 2673ee01465c4a4a42f3d45f86824a3b 360 TIGRFAM TIGR01141 hisC: histidinol-phosphate transaminase 5 359 3.6E-125 T 14-10-2018 IPR005861 Histidinol-phosphate aminotransferase family GO:0000105|GO:0004400 KEGG: 00340+2.6.1.9|KEGG: 00350+2.6.1.9|KEGG: 00360+2.6.1.9|KEGG: 00400+2.6.1.9|KEGG: 00401+2.6.1.9|KEGG: 00960+2.6.1.9 GYO_2489 2673ee01465c4a4a42f3d45f86824a3b 360 SUPERFAMILY SSF53383 12 360 4.26E-83 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase GYO_2489 2673ee01465c4a4a42f3d45f86824a3b 360 ProSitePatterns PS00599 Aminotransferases class-II pyridoxal-phosphate attachment site. 220 229 - T 14-10-2018 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site GO:0016740 GYO_2489 2673ee01465c4a4a42f3d45f86824a3b 360 Gene3D G3DSA:3.40.640.10 43 268 3.0E-119 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 GYO_2489 2673ee01465c4a4a42f3d45f86824a3b 360 Pfam PF00155 Aminotransferase class I and II 30 354 3.3E-69 T 14-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 GYO_2656 6eb8a8295b7acf5423f305922f4deb1f 78 ProDom PD058321 YQZF GSC13 TRANSMEMBRANE IG GKC13 MEMBRANE PROTEINS BH2767 RBL05544 SIMILAR 1 77 1.0E-34 T 14-10-2018 IPR020138 Uncharacterised protein family YqzF GYO_2656 6eb8a8295b7acf5423f305922f4deb1f 78 Pfam PF11118 Protein of unknown function (DUF2627) 2 77 4.8E-33 T 14-10-2018 IPR020138 Uncharacterised protein family YqzF GYO_3581 a0727dbd28b0fc0fa2a0afc49524b840 78 ProDom PD058325 YUSG BH3483 7 78 1.0E-35 T 14-10-2018 IPR020140 Uncharacterised protein family YusG GYO_3581 a0727dbd28b0fc0fa2a0afc49524b840 78 Pfam PF10830 Protein of unknown function (DUF2553) 6 78 2.7E-33 T 14-10-2018 IPR020140 Uncharacterised protein family YusG GYO_1620 13b60c541ab3372d6b332c66342d6bc9 348 Gene3D G3DSA:2.130.10.10 5 348 3.1E-126 T 14-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 GYO_1620 13b60c541ab3372d6b332c66342d6bc9 348 Pfam PF10282 Lactonase, 7-bladed beta-propeller 7 345 1.0E-131 T 14-10-2018 IPR019405 Lactonase, 7-bladed beta propeller GYO_1620 13b60c541ab3372d6b332c66342d6bc9 348 SUPERFAMILY SSF51004 11 347 2.33E-48 T 14-10-2018 IPR011048 Cytochrome cd1-nitrite reductase-like, haem d1 domain superfamily GYO_2527 47d5b2928c05fd97ac77d745a1cce32e 324 Gene3D G3DSA:3.50.50.60 7 295 1.8E-57 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily GYO_2527 47d5b2928c05fd97ac77d745a1cce32e 324 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 120 128 2.7E-18 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 GYO_2527 47d5b2928c05fd97ac77d745a1cce32e 324 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 155 179 2.7E-18 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 GYO_2527 47d5b2928c05fd97ac77d745a1cce32e 324 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 245 266 2.7E-18 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 GYO_2527 47d5b2928c05fd97ac77d745a1cce32e 324 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 5 27 2.7E-18 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 GYO_2527 47d5b2928c05fd97ac77d745a1cce32e 324 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 282 300 2.7E-18 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 GYO_2527 47d5b2928c05fd97ac77d745a1cce32e 324 TIGRFAM TIGR04018 Bthiol_YpdA: putative bacillithiol system oxidoreductase, YpdA family 6 320 2.3E-141 T 14-10-2018 IPR023856 Bacillithiol biosynthesis thiol disulphide oxidoreductase, YpdA GYO_2527 47d5b2928c05fd97ac77d745a1cce32e 324 Pfam PF13738 Pyridine nucleotide-disulphide oxidoreductase 7 291 2.6E-106 T 14-10-2018 GYO_2527 47d5b2928c05fd97ac77d745a1cce32e 324 Gene3D G3DSA:3.50.50.60 132 250 1.8E-57 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily GYO_2527 47d5b2928c05fd97ac77d745a1cce32e 324 SUPERFAMILY SSF51905 5 321 7.66E-42 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily GYO_2527 47d5b2928c05fd97ac77d745a1cce32e 324 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 272 294 1.5E-13 T 14-10-2018 GYO_2527 47d5b2928c05fd97ac77d745a1cce32e 324 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 243 259 1.5E-13 T 14-10-2018 GYO_2527 47d5b2928c05fd97ac77d745a1cce32e 324 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 6 25 1.5E-13 T 14-10-2018 GYO_2527 47d5b2928c05fd97ac77d745a1cce32e 324 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 159 177 1.5E-13 T 14-10-2018 GYO_2198 658726a2849b51774cd25aa6a1f95942 510 SUPERFAMILY SSF51445 63 329 8.21E-22 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily GYO_2198 658726a2849b51774cd25aa6a1f95942 510 Pfam PF02638 Glycosyl hydrolase-like 10 35 356 6.4E-132 T 14-10-2018 IPR003790 Glycosyl hydrolase-like 10 GYO_2198 658726a2849b51774cd25aa6a1f95942 510 Gene3D G3DSA:3.20.20.70 57 243 6.8E-8 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 GYO_2198 658726a2849b51774cd25aa6a1f95942 510 Gene3D G3DSA:2.60.40.10 426 509 1.5E-6 T 14-10-2018 IPR013783 Immunoglobulin-like fold GYO_3853 08fd93f3fbe1ace23245a9e85896fd06 274 Pfam PF00669 Bacterial flagellin N-terminal helical region 3 142 5.3E-45 T 14-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 GYO_3853 08fd93f3fbe1ace23245a9e85896fd06 274 Gene3D G3DSA:1.20.1330.10 53 225 1.4E-64 T 14-10-2018 GYO_3853 08fd93f3fbe1ace23245a9e85896fd06 274 SUPERFAMILY SSF64518 1 274 8.11E-96 T 14-10-2018 GYO_3853 08fd93f3fbe1ace23245a9e85896fd06 274 Pfam PF00700 Bacterial flagellin C-terminal helical region 189 273 6.1E-33 T 14-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 GYO_3853 08fd93f3fbe1ace23245a9e85896fd06 274 PRINTS PR00207 Flagellin signature 74 93 2.5E-24 T 14-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 GYO_3853 08fd93f3fbe1ace23245a9e85896fd06 274 PRINTS PR00207 Flagellin signature 35 52 2.5E-24 T 14-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 GYO_3853 08fd93f3fbe1ace23245a9e85896fd06 274 PRINTS PR00207 Flagellin signature 110 133 2.5E-24 T 14-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 GYO_3853 08fd93f3fbe1ace23245a9e85896fd06 274 Gene3D G3DSA:1.10.8.410 226 274 2.7E-29 T 14-10-2018 GYO_0517 b242e48bbfaa71bd4774c710dc01b04a 272 Pfam PF02540 NAD synthase 23 263 3.2E-80 T 14-10-2018 IPR022310 NAD/GMP synthase GYO_0517 b242e48bbfaa71bd4774c710dc01b04a 272 Hamap MF_00193 NH(3)-dependent NAD(+) synthetase [nadE]. 18 266 48.649 T 14-10-2018 IPR022926 NH(3)-dependent NAD(+) synthetase GO:0008795|GO:0009435 KEGG: 00760+6.3.1.5 GYO_0517 b242e48bbfaa71bd4774c710dc01b04a 272 Gene3D G3DSA:3.40.50.620 1 272 1.7E-85 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold GYO_0517 b242e48bbfaa71bd4774c710dc01b04a 272 SUPERFAMILY SSF52402 3 271 2.07E-80 T 14-10-2018 GYO_0517 b242e48bbfaa71bd4774c710dc01b04a 272 TIGRFAM TIGR00552 nadE: NAD+ synthetase 17 272 2.0E-88 T 14-10-2018 IPR003694 NAD(+) synthetase GO:0003952|GO:0005524|GO:0009435 KEGG: 00760+6.3.1.5|Reactome: R-HSA-196807 GYO_1125 f82662d10a3cb2036552d4e35e4f35e1 172 SMART SM00287 112 172 9.8E-4 T 14-10-2018 IPR003646 SH3-like domain, bacterial-type GYO_1125 f82662d10a3cb2036552d4e35e4f35e1 172 SMART SM00287 42 105 1.1E-17 T 14-10-2018 IPR003646 SH3-like domain, bacterial-type GYO_1125 f82662d10a3cb2036552d4e35e4f35e1 172 Gene3D G3DSA:2.30.30.40 43 114 8.7E-14 T 14-10-2018 GYO_1125 f82662d10a3cb2036552d4e35e4f35e1 172 Pfam PF08239 Bacterial SH3 domain 51 101 4.7E-10 T 14-10-2018 IPR003646 SH3-like domain, bacterial-type GYO_1601 3d82edc880419733f896217b1d972c7e 333 Pfam PF01384 Phosphate transporter family 22 321 3.2E-91 T 14-10-2018 IPR001204 Phosphate transporter GO:0005315|GO:0006817|GO:0016020 Reactome: R-HSA-427652 GYO_1081 6785f205c2725c500ec01bb897d8164a 108 Hamap MF_00010 UPF0060 membrane protein YnfA [ynfA]. 2 107 22.532 T 14-10-2018 IPR003844 Uncharacterised protein family UPF0060 GO:0016020 GYO_1081 6785f205c2725c500ec01bb897d8164a 108 Pfam PF02694 Uncharacterised BCR, YnfA/UPF0060 family 1 108 2.6E-50 T 14-10-2018 IPR003844 Uncharacterised protein family UPF0060 GO:0016020 GYO_1081 6785f205c2725c500ec01bb897d8164a 108 SUPERFAMILY SSF103481 7 106 3.01E-10 T 14-10-2018 GYO_0117 a2605b5b134811b5ae5a28b2cc79b608 158 TIGRFAM TIGR00151 ispF: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase 3 157 6.4E-73 T 14-10-2018 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 GYO_0117 a2605b5b134811b5ae5a28b2cc79b608 158 Hamap MF_00107 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [ispF]. 2 157 36.875 T 14-10-2018 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 GYO_0117 a2605b5b134811b5ae5a28b2cc79b608 158 Pfam PF02542 YgbB family 2 156 2.0E-65 T 14-10-2018 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 GYO_0117 a2605b5b134811b5ae5a28b2cc79b608 158 SUPERFAMILY SSF69765 1 157 3.92E-67 T 14-10-2018 IPR036571 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase superfamily GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 GYO_0117 a2605b5b134811b5ae5a28b2cc79b608 158 Gene3D G3DSA:3.30.1330.50 1 158 1.0E-68 T 14-10-2018 IPR036571 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase superfamily GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 GYO_0117 a2605b5b134811b5ae5a28b2cc79b608 158 ProSitePatterns PS01350 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase signature. 36 51 - T 14-10-2018 IPR020555 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, conserved site GO:0008685 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 GYO_4369 b514382ef1309d24c2324b1499bf59b3 115 Pfam PF06486 Protein of unknown function (DUF1093) 33 103 1.3E-19 T 14-10-2018 IPR006542 Protein of unknown function DUF1093 GYO_4369 b514382ef1309d24c2324b1499bf59b3 115 Gene3D G3DSA:2.40.50.480 29 115 3.6E-33 T 14-10-2018 IPR036166 YxeA-like superfamily GYO_4369 b514382ef1309d24c2324b1499bf59b3 115 SUPERFAMILY SSF159121 29 115 8.5E-26 T 14-10-2018 IPR036166 YxeA-like superfamily GYO_4369 b514382ef1309d24c2324b1499bf59b3 115 TIGRFAM TIGR01655 yxeA_fam: conserved hypothetical protein 1 112 9.2E-43 T 14-10-2018 IPR006542 Protein of unknown function DUF1093 GYO_3434 1ef11d8cf4854f5264ef39eabd98c798 128 Pfam PF08810 Kinase associated protein B 14 125 4.5E-50 T 14-10-2018 IPR014916 Kinase associated protein B GYO_3434 1ef11d8cf4854f5264ef39eabd98c798 128 SMART SM01298 14 126 1.1E-78 T 14-10-2018 IPR014916 Kinase associated protein B GYO_3434 1ef11d8cf4854f5264ef39eabd98c798 128 SUPERFAMILY SSF141251 3 125 1.7E-55 T 14-10-2018 IPR038080 Kinase associated protein B superfamily GYO_3434 1ef11d8cf4854f5264ef39eabd98c798 128 Gene3D G3DSA:2.30.30.430 1 125 3.6E-53 T 14-10-2018 IPR038080 Kinase associated protein B superfamily GYO_1367 5538685bbcb89038a5ecf3ec1ef121bb 1234 Gene3D G3DSA:3.90.320.10 991 1234 1.2E-92 T 14-10-2018 IPR011604 Exonuclease, phage-type/RecB, C-terminal GYO_1367 5538685bbcb89038a5ecf3ec1ef121bb 1234 Hamap MF_01451 ATP-dependent helicase/nuclease subunit A [addA]. 8 1234 20.091 T 14-10-2018 IPR014152 DNA helicase subunit AddA GO:0004003|GO:0006302 GYO_1367 5538685bbcb89038a5ecf3ec1ef121bb 1234 SUPERFAMILY SSF52540 5 889 1.59E-120 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase GYO_1367 5538685bbcb89038a5ecf3ec1ef121bb 1234 Pfam PF13361 UvrD-like helicase C-terminal domain 472 882 6.5E-34 T 14-10-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 GYO_1367 5538685bbcb89038a5ecf3ec1ef121bb 1234 Pfam PF12705 PD-(D/E)XK nuclease superfamily 1054 1225 9.3E-8 T 14-10-2018 IPR038726 PD-(D/E)XK endonuclease-like domain, AddAB-type GYO_1367 5538685bbcb89038a5ecf3ec1ef121bb 1234 Gene3D G3DSA:3.40.50.300 263 474 3.4E-34 T 14-10-2018 GYO_1367 5538685bbcb89038a5ecf3ec1ef121bb 1234 Gene3D G3DSA:3.40.50.300 2 181 1.0E-40 T 14-10-2018 GYO_1367 5538685bbcb89038a5ecf3ec1ef121bb 1234 Pfam PF00580 UvrD/REP helicase N-terminal domain 11 461 8.8E-110 T 14-10-2018 IPR034739 UvrD/AddA helicase, N-terminal GO:0005524 GYO_1367 5538685bbcb89038a5ecf3ec1ef121bb 1234 TIGRFAM TIGR02785 addA_Gpos: helicase-exonuclease AddAB, AddA subunit 10 1233 0.0 T 14-10-2018 IPR014152 DNA helicase subunit AddA GO:0004003|GO:0006302 GYO_1367 5538685bbcb89038a5ecf3ec1ef121bb 1234 Gene3D G3DSA:3.40.50.300 475 755 4.8E-62 T 14-10-2018 GYO_1367 5538685bbcb89038a5ecf3ec1ef121bb 1234 Gene3D G3DSA:3.40.50.300 756 960 5.8E-52 T 14-10-2018 GYO_1367 5538685bbcb89038a5ecf3ec1ef121bb 1234 SUPERFAMILY SSF52980 1014 1232 1.23E-42 T 14-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 GYO_3723 32d1e1a6cd53da15e007804fbbf44ba0 336 Pfam PF00296 Luciferase-like monooxygenase 24 304 8.1E-40 T 14-10-2018 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 GYO_3723 32d1e1a6cd53da15e007804fbbf44ba0 336 TIGRFAM TIGR03558 oxido_grp_1: luciferase family oxidoreductase, group 1 11 331 4.7E-138 T 14-10-2018 IPR019949 Luciferase family oxidoreductase, group 1 GYO_3723 32d1e1a6cd53da15e007804fbbf44ba0 336 Gene3D G3DSA:3.20.20.30 6 336 3.1E-101 T 14-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 GYO_3723 32d1e1a6cd53da15e007804fbbf44ba0 336 SUPERFAMILY SSF51679 11 331 1.77E-86 T 14-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 GYO_2275 0cd5b6ec8ed08f6bd2a026ed0cd77b99 213 ProSitePatterns PS00776 Glycosyl hydrolases family 11 (GH11) active site signature 1. 103 113 - T 14-10-2018 IPR018208 Glycoside hydrolase family 11, active site 1 MetaCyc: PWY-6717|MetaCyc: PWY-6784 GYO_2275 0cd5b6ec8ed08f6bd2a026ed0cd77b99 213 ProSitePatterns PS00777 Glycosyl hydrolases family 11 (GH11) active site signature 2. 197 208 - T 14-10-2018 IPR033119 Glycoside hydrolase family 11, active site 2 MetaCyc: PWY-6717|MetaCyc: PWY-6784 GYO_2275 0cd5b6ec8ed08f6bd2a026ed0cd77b99 213 Gene3D G3DSA:2.60.120.180 29 213 7.7E-82 T 14-10-2018 IPR013319 Glycoside hydrolase family 11/12 GO:0004553 MetaCyc: PWY-6717|MetaCyc: PWY-6784 GYO_2275 0cd5b6ec8ed08f6bd2a026ed0cd77b99 213 Pfam PF00457 Glycosyl hydrolases family 11 31 211 5.7E-69 T 14-10-2018 IPR033123 Glycosyl hydrolases family 11 (GH11) domain MetaCyc: PWY-6717|MetaCyc: PWY-6784 GYO_2275 0cd5b6ec8ed08f6bd2a026ed0cd77b99 213 SUPERFAMILY SSF49899 33 213 1.58E-71 T 14-10-2018 IPR013320 Concanavalin A-like lectin/glucanase domain superfamily GYO_2275 0cd5b6ec8ed08f6bd2a026ed0cd77b99 213 PRINTS PR00911 Glycosyl hydrolase family 11 signature 150 155 7.6E-19 T 14-10-2018 IPR001137 Glycoside hydrolase family 11 GO:0004553|GO:0005975 MetaCyc: PWY-6717|MetaCyc: PWY-6784 GYO_2275 0cd5b6ec8ed08f6bd2a026ed0cd77b99 213 PRINTS PR00911 Glycosyl hydrolase family 11 signature 155 164 7.6E-19 T 14-10-2018 IPR001137 Glycoside hydrolase family 11 GO:0004553|GO:0005975 MetaCyc: PWY-6717|MetaCyc: PWY-6784 GYO_2275 0cd5b6ec8ed08f6bd2a026ed0cd77b99 213 PRINTS PR00911 Glycosyl hydrolase family 11 signature 103 113 7.6E-19 T 14-10-2018 IPR001137 Glycoside hydrolase family 11 GO:0004553|GO:0005975 MetaCyc: PWY-6717|MetaCyc: PWY-6784 GYO_2275 0cd5b6ec8ed08f6bd2a026ed0cd77b99 213 PRINTS PR00911 Glycosyl hydrolase family 11 signature 93 102 7.6E-19 T 14-10-2018 IPR001137 Glycoside hydrolase family 11 GO:0004553|GO:0005975 MetaCyc: PWY-6717|MetaCyc: PWY-6784 GYO_2275 0cd5b6ec8ed08f6bd2a026ed0cd77b99 213 PRINTS PR00911 Glycosyl hydrolase family 11 signature 181 189 7.6E-19 T 14-10-2018 IPR001137 Glycoside hydrolase family 11 GO:0004553|GO:0005975 MetaCyc: PWY-6717|MetaCyc: PWY-6784 GYO_2275 0cd5b6ec8ed08f6bd2a026ed0cd77b99 213 PRINTS PR00911 Glycosyl hydrolase family 11 signature 129 135 7.6E-19 T 14-10-2018 IPR001137 Glycoside hydrolase family 11 GO:0004553|GO:0005975 MetaCyc: PWY-6717|MetaCyc: PWY-6784 GYO_3213 2d37f0d570f077436e784953b9e0cabe 200 SUPERFAMILY SSF55174 2 200 1.96E-67 T 14-10-2018 GYO_3213 2d37f0d570f077436e784953b9e0cabe 200 Gene3D G3DSA:1.10.1050.10 6 200 7.1E-76 T 14-10-2018 GYO_3213 2d37f0d570f077436e784953b9e0cabe 200 ProSitePatterns PS00632 Ribosomal protein S4 signature. 90 114 - T 14-10-2018 IPR018079 Ribosomal protein S4, conserved site GO:0005622|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6790901|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 GYO_3213 2d37f0d570f077436e784953b9e0cabe 200 Gene3D G3DSA:3.10.290.10 91 185 7.1E-76 T 14-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 GYO_3213 2d37f0d570f077436e784953b9e0cabe 200 SMART SM00363 92 156 1.0E-18 T 14-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 GYO_3213 2d37f0d570f077436e784953b9e0cabe 200 Pfam PF00163 Ribosomal protein S4/S9 N-terminal domain 3 90 1.1E-27 T 14-10-2018 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 Reactome: R-HSA-6790901|Reactome: R-HSA-6791226 GYO_3213 2d37f0d570f077436e784953b9e0cabe 200 Hamap MF_01306_B 30S ribosomal protein S4 [rpsD]. 1 200 36.14 T 14-10-2018 IPR005709 Ribosomal protein S4, bacterial-type GO:0003735|GO:0006412|GO:0015935 GYO_3213 2d37f0d570f077436e784953b9e0cabe 200 Pfam PF01479 S4 domain 93 139 3.4E-21 T 14-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 GYO_3213 2d37f0d570f077436e784953b9e0cabe 200 TIGRFAM TIGR01017 rpsD_bact: ribosomal protein uS4 3 200 1.1E-85 T 14-10-2018 IPR005709 Ribosomal protein S4, bacterial-type GO:0003735|GO:0006412|GO:0015935 GYO_3213 2d37f0d570f077436e784953b9e0cabe 200 SMART SM01390 3 91 1.2E-44 T 14-10-2018 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 Reactome: R-HSA-6790901|Reactome: R-HSA-6791226 GYO_1870 68dcc3f17a2cade399e0aa331a896927 263 Gene3D G3DSA:3.40.50.10960 122 236 3.5E-39 T 14-10-2018 GYO_1870 68dcc3f17a2cade399e0aa331a896927 263 Pfam PF08478 POTRA domain, FtsQ-type 54 123 4.5E-20 T 14-10-2018 IPR013685 POTRA domain, FtsQ-type GYO_1870 68dcc3f17a2cade399e0aa331a896927 263 Gene3D G3DSA:3.10.20.310 53 121 1.8E-6 T 14-10-2018 GYO_1870 68dcc3f17a2cade399e0aa331a896927 263 Pfam PF03799 Cell division protein FtsQ 127 238 4.5E-9 T 14-10-2018 IPR005548 Cell division protein FtsQ/DivIB GYO_1870 68dcc3f17a2cade399e0aa331a896927 263 Hamap MF_00912 Cell division protein DivIB [divIB]. 13 253 32.405 T 14-10-2018 IPR026580 Cell division protein DivIB GYO_4242 fcd843590ddb34eb43839eb9d6cfa8e5 171 SMART SM00347 54 154 4.2E-28 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 GYO_4242 fcd843590ddb34eb43839eb9d6cfa8e5 171 PRINTS PR00598 Bacterial regulatory protein MarR family signature 95 110 6.0E-9 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 GYO_4242 fcd843590ddb34eb43839eb9d6cfa8e5 171 PRINTS PR00598 Bacterial regulatory protein MarR family signature 144 164 6.0E-9 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 GYO_4242 fcd843590ddb34eb43839eb9d6cfa8e5 171 PRINTS PR00598 Bacterial regulatory protein MarR family signature 114 130 6.0E-9 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 GYO_4242 fcd843590ddb34eb43839eb9d6cfa8e5 171 ProSitePatterns PS01117 MarR-type HTH domain signature. 93 127 - T 14-10-2018 IPR023187 Transcriptional regulator MarR-type, conserved site GYO_4242 fcd843590ddb34eb43839eb9d6cfa8e5 171 Pfam PF01047 MarR family 61 119 6.6E-16 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 GYO_4242 fcd843590ddb34eb43839eb9d6cfa8e5 171 SUPERFAMILY SSF46785 34 169 6.93E-27 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily GYO_4242 fcd843590ddb34eb43839eb9d6cfa8e5 171 Gene3D G3DSA:1.10.10.10 6 171 1.4E-27 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily GYO_0378 6f6a1edd45d0b23532671b7be5bc9cf2 172 Gene3D G3DSA:3.40.1050.10 1 161 2.8E-12 T 14-10-2018 IPR036874 Carbonic anhydrase superfamily GO:0004089|GO:0008270 GYO_0378 6f6a1edd45d0b23532671b7be5bc9cf2 172 SUPERFAMILY SSF53056 5 156 4.71E-16 T 14-10-2018 IPR036874 Carbonic anhydrase superfamily GO:0004089|GO:0008270 GYO_1029 d34727f55fbcb266fa8d5c5472897a5d 363 Gene3D G3DSA:3.90.1230.10 194 300 9.5E-149 T 14-10-2018 GYO_1029 d34727f55fbcb266fa8d5c5472897a5d 363 PIRSF PIRSF037219 1 363 6.2E-193 T 14-10-2018 IPR017142 Nitric oxide synthase, oxygenase subunit GO:0004517|GO:0006809|GO:0020037 KEGG: 00220+1.14.14.47|KEGG: 00330+1.14.14.47 GYO_1029 d34727f55fbcb266fa8d5c5472897a5d 363 Gene3D G3DSA:3.90.440.10 82 193 9.5E-149 T 14-10-2018 GYO_1029 d34727f55fbcb266fa8d5c5472897a5d 363 SUPERFAMILY SSF56512 3 362 1.96E-167 T 14-10-2018 IPR036119 Nitric oxide synthase, N-terminal domain superfamily GO:0004517|GO:0006809|GO:0055114 Reactome: R-HSA-1222556|Reactome: R-HSA-392154 GYO_1029 d34727f55fbcb266fa8d5c5472897a5d 363 Pfam PF02898 Nitric oxide synthase, oxygenase domain 4 362 6.3E-167 T 14-10-2018 IPR004030 Nitric oxide synthase, N-terminal GO:0004517|GO:0006809|GO:0055114 Reactome: R-HSA-1222556|Reactome: R-HSA-392154 GYO_1029 d34727f55fbcb266fa8d5c5472897a5d 363 Gene3D G3DSA:3.90.340.10 7 355 9.5E-149 T 14-10-2018 GYO_1029 d34727f55fbcb266fa8d5c5472897a5d 363 ProSitePatterns PS60001 Nitric oxide synthase (NOS) signature. 65 72 - T 14-10-2018 IPR004030 Nitric oxide synthase, N-terminal GO:0004517|GO:0006809|GO:0055114 Reactome: R-HSA-1222556|Reactome: R-HSA-392154 GYO_4330 3fabd7e1406721a9b5f845776f1cfc02 2335 TIGRFAM TIGR03696 Rhs_assc_core: RHS repeat-associated core domain 2104 2187 1.8E-20 T 14-10-2018 IPR022385 Rhs repeat-associated core GO:0097264 GYO_4330 3fabd7e1406721a9b5f845776f1cfc02 2335 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 1919 1959 1.4E-7 T 14-10-2018 IPR006530 YD repeat GYO_4330 3fabd7e1406721a9b5f845776f1cfc02 2335 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 1032 1072 1.4E-8 T 14-10-2018 IPR006530 YD repeat GYO_4330 3fabd7e1406721a9b5f845776f1cfc02 2335 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 1210 1247 0.0034 T 14-10-2018 IPR006530 YD repeat GYO_4330 3fabd7e1406721a9b5f845776f1cfc02 2335 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 1636 1671 9.6E-6 T 14-10-2018 IPR006530 YD repeat GYO_4330 3fabd7e1406721a9b5f845776f1cfc02 2335 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 1081 1103 9.4E-4 T 14-10-2018 IPR006530 YD repeat GYO_4330 3fabd7e1406721a9b5f845776f1cfc02 2335 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 1621 1656 3.2E-4 T 14-10-2018 IPR006530 YD repeat GYO_4330 3fabd7e1406721a9b5f845776f1cfc02 2335 Gene3D G3DSA:2.180.10.10 1842 2186 3.3E-33 T 14-10-2018 GYO_4330 3fabd7e1406721a9b5f845776f1cfc02 2335 Gene3D G3DSA:3.90.930.1 1609 1757 2.5E-9 T 14-10-2018 GYO_4330 3fabd7e1406721a9b5f845776f1cfc02 2335 Gene3D G3DSA:3.90.930.1 1078 1227 2.3E-7 T 14-10-2018 GYO_4330 3fabd7e1406721a9b5f845776f1cfc02 2335 ProDom PD039135 WALL-ASSOCIATED REPEAT PROTEIN CELL WALL HYDROLASE PRECURSOR SIGNAL TRANSMEMBRANE RETICULOCYTE 50 272 1.0E-121 T 14-10-2018 GYO_4330 3fabd7e1406721a9b5f845776f1cfc02 2335 SUPERFAMILY SSF49785 1288 1430 3.19E-8 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily GYO_4330 3fabd7e1406721a9b5f845776f1cfc02 2335 Pfam PF05593 RHS Repeat 1032 1065 6.2E-8 T 14-10-2018 IPR031325 RHS repeat GYO_4330 3fabd7e1406721a9b5f845776f1cfc02 2335 Pfam PF05593 RHS Repeat 2082 2113 4.0E-6 T 14-10-2018 IPR031325 RHS repeat GYO_4330 3fabd7e1406721a9b5f845776f1cfc02 2335 Gene3D G3DSA:2.60.120.260 1455 1608 6.1E-12 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily GYO_4330 3fabd7e1406721a9b5f845776f1cfc02 2335 Gene3D G3DSA:2.60.120.260 1289 1453 8.5E-26 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily GYO_3082 46b8921179381556d663b5b107693ee2 195 Hamap MF_01405 dITP/XTP pyrophosphatase. 2 195 50.836 T 14-10-2018 IPR020922 dITP/XTP pyrophosphatase GO:0009143|GO:0017111 KEGG: 00230+3.6.1.66 GYO_3082 46b8921179381556d663b5b107693ee2 195 TIGRFAM TIGR00042 TIGR00042: non-canonical purine NTP pyrophosphatase, RdgB/HAM1 family 4 193 4.9E-76 T 14-10-2018 IPR002637 Ham1-like protein GO:0009143|GO:0047429 KEGG: 00230+3.6.1.66|Reactome: R-HSA-74259 GYO_3082 46b8921179381556d663b5b107693ee2 195 Pfam PF01725 Ham1 family 5 191 4.2E-63 T 14-10-2018 IPR002637 Ham1-like protein GO:0009143|GO:0047429 KEGG: 00230+3.6.1.66|Reactome: R-HSA-74259 GYO_3082 46b8921179381556d663b5b107693ee2 195 Gene3D G3DSA:3.90.950.10 1 195 2.4E-79 T 14-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like GYO_3082 46b8921179381556d663b5b107693ee2 195 SUPERFAMILY SSF52972 1 193 1.83E-71 T 14-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like GYO_0468 fd22757a62b1968d5fd8af04b1ccebfa 477 Gene3D G3DSA:1.20.1720.10 16 224 4.2E-40 T 14-10-2018 GYO_0468 fd22757a62b1968d5fd8af04b1ccebfa 477 Gene3D G3DSA:1.20.1250.20 264 475 1.0E-20 T 14-10-2018 GYO_0468 fd22757a62b1968d5fd8af04b1ccebfa 477 SUPERFAMILY SSF103473 12 191 1.27E-36 T 14-10-2018 IPR036259 MFS transporter superfamily GYO_0468 fd22757a62b1968d5fd8af04b1ccebfa 477 Pfam PF07690 Major Facilitator Superfamily 20 413 5.4E-45 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 GYO_0468 fd22757a62b1968d5fd8af04b1ccebfa 477 SUPERFAMILY SSF103473 204 473 1.96E-27 T 14-10-2018 IPR036259 MFS transporter superfamily GYO_0468 fd22757a62b1968d5fd8af04b1ccebfa 477 TIGRFAM TIGR00711 efflux_EmrB: drug resistance MFS transporter, drug:H+ antiporter-2 (14 Spanner) (DHA2) family 16 437 1.3E-94 T 14-10-2018 IPR004638 Drug resistance transporter EmrB/QacA subfamily GO:0016021|GO:0022857|GO:0055085 GYO_0468 fd22757a62b1968d5fd8af04b1ccebfa 477 PRINTS PR01036 Tetracycline resistance protein TetB signature 19 43 8.0E-9 T 14-10-2018 GYO_0468 fd22757a62b1968d5fd8af04b1ccebfa 477 PRINTS PR01036 Tetracycline resistance protein TetB signature 342 362 8.0E-9 T 14-10-2018 GYO_0468 fd22757a62b1968d5fd8af04b1ccebfa 477 PRINTS PR01036 Tetracycline resistance protein TetB signature 79 101 8.0E-9 T 14-10-2018 GYO_0468 fd22757a62b1968d5fd8af04b1ccebfa 477 PRINTS PR01036 Tetracycline resistance protein TetB signature 140 164 8.0E-9 T 14-10-2018 GYO_0955 f8e0b2f7e74f3c2ee495d83dccbcd43f 577 Gene3D G3DSA:1.20.1480.50 279 374 1.2E-8 T 14-10-2018 GYO_0955 f8e0b2f7e74f3c2ee495d83dccbcd43f 577 Pfam PF02743 Cache domain 46 272 7.7E-17 T 14-10-2018 IPR033479 Double Cache domain 1 GYO_0955 f8e0b2f7e74f3c2ee495d83dccbcd43f 577 SUPERFAMILY SSF158472 313 367 2.22E-5 T 14-10-2018 GYO_0955 f8e0b2f7e74f3c2ee495d83dccbcd43f 577 SMART SM00304 312 368 2.9E-6 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 GYO_0955 f8e0b2f7e74f3c2ee495d83dccbcd43f 577 Gene3D G3DSA:3.30.565.10 441 576 1.1E-20 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily GYO_0955 f8e0b2f7e74f3c2ee495d83dccbcd43f 577 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 481 572 6.3E-9 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase GYO_0955 f8e0b2f7e74f3c2ee495d83dccbcd43f 577 Pfam PF06580 Histidine kinase 380 459 2.2E-25 T 14-10-2018 IPR010559 Signal transduction histidine kinase, internal region GO:0000155|GO:0000160|GO:0016021 GYO_0955 f8e0b2f7e74f3c2ee495d83dccbcd43f 577 SUPERFAMILY SSF55874 436 571 5.24E-21 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily GYO_0955 f8e0b2f7e74f3c2ee495d83dccbcd43f 577 PRINTS PR00344 Bacterial sensor protein C-terminal signature 511 525 1.1E-8 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 GYO_0955 f8e0b2f7e74f3c2ee495d83dccbcd43f 577 PRINTS PR00344 Bacterial sensor protein C-terminal signature 531 549 1.1E-8 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 GYO_0955 f8e0b2f7e74f3c2ee495d83dccbcd43f 577 PRINTS PR00344 Bacterial sensor protein C-terminal signature 558 571 1.1E-8 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 GYO_0955 f8e0b2f7e74f3c2ee495d83dccbcd43f 577 Pfam PF00672 HAMP domain 313 364 1.7E-6 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 GYO_0955 f8e0b2f7e74f3c2ee495d83dccbcd43f 577 SMART SM00387 474 574 2.1E-8 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase GYO_2251 18ce18c7a26ea8c27e26a039c1256f5c 390 Pfam PF00190 Cupin 235 370 5.9E-25 T 14-10-2018 IPR006045 Cupin 1 GO:0045735 GYO_2251 18ce18c7a26ea8c27e26a039c1256f5c 390 Pfam PF00190 Cupin 68 195 2.0E-19 T 14-10-2018 IPR006045 Cupin 1 GO:0045735 GYO_2251 18ce18c7a26ea8c27e26a039c1256f5c 390 Gene3D G3DSA:2.60.120.10 63 235 6.6E-165 T 14-10-2018 IPR014710 RmlC-like jelly roll fold GYO_2251 18ce18c7a26ea8c27e26a039c1256f5c 390 Gene3D G3DSA:2.60.120.10 15 379 6.6E-165 T 14-10-2018 IPR014710 RmlC-like jelly roll fold GYO_2251 18ce18c7a26ea8c27e26a039c1256f5c 390 SUPERFAMILY SSF51182 25 381 3.53E-102 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily GYO_2251 18ce18c7a26ea8c27e26a039c1256f5c 390 SMART SM00835 57 198 1.5E-15 T 14-10-2018 IPR006045 Cupin 1 GO:0045735 GYO_2251 18ce18c7a26ea8c27e26a039c1256f5c 390 SMART SM00835 234 375 4.8E-33 T 14-10-2018 IPR006045 Cupin 1 GO:0045735 GYO_2251 18ce18c7a26ea8c27e26a039c1256f5c 390 ProDom PD001462 35-EPIMERASE DTDP-4-DEHYDRORHAMNOSE ISOMERASE RMLC EPIMERASE RELATED DTDP-6-DEOXY-D-GLUCOSE-35-EPIMERASE DTDP-4-KETO-6-DEOXY-D-GLUCOSE DTDP-4-KETO-6-DEOXYGLUCOSE-35-EPIMERASE DTDP-L-RHAMNOSE 89 168 0.002 T 14-10-2018 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 GYO_2251 18ce18c7a26ea8c27e26a039c1256f5c 390 TIGRFAM TIGR03404 bicupin_oxalic: bicupin, oxalate decarboxylase family 21 385 2.3E-180 T 14-10-2018 IPR017774 Bicupin, oxalate decarboxylase/oxidase GO:0033609 KEGG: 00630+4.1.1.2|MetaCyc: PWY-6698 GYO_1734 2d08b361ad7ef30214726e80170efaf8 393 SUPERFAMILY SSF53383 5 376 8.61E-114 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase GYO_1734 2d08b361ad7ef30214726e80170efaf8 393 Pfam PF00155 Aminotransferase class I and II 29 375 6.8E-66 T 14-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 GYO_1734 2d08b361ad7ef30214726e80170efaf8 393 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 228 241 - T 14-10-2018 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 GYO_1734 2d08b361ad7ef30214726e80170efaf8 393 Gene3D G3DSA:3.40.640.10 58 278 2.9E-131 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 GYO_1734 2d08b361ad7ef30214726e80170efaf8 393 Gene3D G3DSA:3.90.1150.10 29 375 2.9E-131 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 GYO_3419 4b1bca97659e2046ecbc199397b4d5c8 110 Pfam PF11458 Membrane-integrating protein Mistic 27 110 5.5E-56 T 14-10-2018 IPR021078 Membrane-integrating protein Mistic GYO_3419 4b1bca97659e2046ecbc199397b4d5c8 110 Gene3D G3DSA:1.10.220.90 12 101 5.1E-45 T 14-10-2018 IPR038193 Mistic superfamily GYO_3491 585cd93e4b944af792c8e7bea805164f 261 Pfam PF00106 short chain dehydrogenase 9 202 6.3E-64 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR GYO_3491 585cd93e4b944af792c8e7bea805164f 261 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 144 172 - T 14-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 GYO_3491 585cd93e4b944af792c8e7bea805164f 261 Gene3D G3DSA:3.40.50.720 1 259 5.7E-80 T 14-10-2018 GYO_3491 585cd93e4b944af792c8e7bea805164f 261 TIGRFAM TIGR04316 dhbA_paeA: 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase 11 260 3.3E-117 T 14-10-2018 IPR003560 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase GO:0008667|GO:0019290|GO:0055114 MetaCyc: PWY-5901 GYO_3491 585cd93e4b944af792c8e7bea805164f 261 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 84 95 7.3E-10 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR GYO_3491 585cd93e4b944af792c8e7bea805164f 261 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 137 145 7.3E-10 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR GYO_3491 585cd93e4b944af792c8e7bea805164f 261 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 157 176 7.3E-10 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR GYO_3491 585cd93e4b944af792c8e7bea805164f 261 SUPERFAMILY SSF51735 7 259 4.66E-80 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily GYO_3491 585cd93e4b944af792c8e7bea805164f 261 PRINTS PR01397 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase signature 107 127 8.0E-68 T 14-10-2018 IPR003560 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase GO:0008667|GO:0019290|GO:0055114 MetaCyc: PWY-5901 GYO_3491 585cd93e4b944af792c8e7bea805164f 261 PRINTS PR01397 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase signature 211 230 8.0E-68 T 14-10-2018 IPR003560 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase GO:0008667|GO:0019290|GO:0055114 MetaCyc: PWY-5901 GYO_3491 585cd93e4b944af792c8e7bea805164f 261 PRINTS PR01397 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase signature 15 32 8.0E-68 T 14-10-2018 IPR003560 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase GO:0008667|GO:0019290|GO:0055114 MetaCyc: PWY-5901 GYO_3491 585cd93e4b944af792c8e7bea805164f 261 PRINTS PR01397 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase signature 172 195 8.0E-68 T 14-10-2018 IPR003560 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase GO:0008667|GO:0019290|GO:0055114 MetaCyc: PWY-5901 GYO_3491 585cd93e4b944af792c8e7bea805164f 261 PRINTS PR01397 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase signature 87 104 8.0E-68 T 14-10-2018 IPR003560 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase GO:0008667|GO:0019290|GO:0055114 MetaCyc: PWY-5901 GYO_3491 585cd93e4b944af792c8e7bea805164f 261 PRINTS PR01397 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase signature 237 256 8.0E-68 T 14-10-2018 IPR003560 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase GO:0008667|GO:0019290|GO:0055114 MetaCyc: PWY-5901 GYO_0497 52d68d91c6ef9bd7e2f0dc1574533c79 537 Pfam PF14266 Putative component of 'biosynthetic module' 40 525 2.7E-162 T 14-10-2018 IPR025647 Putative component of 'biosynthetic module' GYO_2989 db8aef2f01a7e3ef7daa6f0f8203c2e4 371 Pfam PF03054 tRNA methyl transferase 9 358 6.3E-151 T 14-10-2018 GYO_2989 db8aef2f01a7e3ef7daa6f0f8203c2e4 371 SUPERFAMILY SSF52402 7 244 1.87E-59 T 14-10-2018 GYO_2989 db8aef2f01a7e3ef7daa6f0f8203c2e4 371 Gene3D G3DSA:3.40.50.620 1 213 6.0E-96 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold GYO_2989 db8aef2f01a7e3ef7daa6f0f8203c2e4 371 Gene3D G3DSA:2.30.30.280 214 277 9.8E-25 T 14-10-2018 IPR023382 Adenine nucleotide alpha hydrolase-like domains GO:0016783 MetaCyc: PWY-7887|MetaCyc: PWY-7892|Reactome: R-HSA-6787450 GYO_2989 db8aef2f01a7e3ef7daa6f0f8203c2e4 371 Hamap MF_00144 tRNA-specific 2-thiouridylase MnmA [mnmA]. 8 359 40.607 T 14-10-2018 IPR004506 tRNA-specific 2-thiouridylase GO:0008033|GO:0016740 MetaCyc: PWY-7887|MetaCyc: PWY-7892|Reactome: R-HSA-6787450 GYO_2989 db8aef2f01a7e3ef7daa6f0f8203c2e4 371 TIGRFAM TIGR00420 trmU: tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase 9 358 1.1E-137 T 14-10-2018 IPR004506 tRNA-specific 2-thiouridylase GO:0008033|GO:0016740 MetaCyc: PWY-7887|MetaCyc: PWY-7892|Reactome: R-HSA-6787450 GYO_2989 db8aef2f01a7e3ef7daa6f0f8203c2e4 371 Gene3D G3DSA:2.40.30.10 279 371 2.1E-28 T 14-10-2018 GYO_4410 b2f9a27d4b09788cd2d1a147b7936d0f 448 TIGRFAM TIGR00791 gntP: transporter, gluconate:H+ symporter (GntP) family 1 448 2.4E-205 T 14-10-2018 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 GYO_4410 b2f9a27d4b09788cd2d1a147b7936d0f 448 PIRSF PIRSF002746 1 448 4.8E-176 T 14-10-2018 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 GYO_4410 b2f9a27d4b09788cd2d1a147b7936d0f 448 Pfam PF02447 GntP family permease 1 447 3.6E-179 T 14-10-2018 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 GYO_0711 7a88cdb2d06e590aca2489e1e935472d 181 Pfam PF14278 Transcriptional regulator C-terminal region 86 159 1.9E-12 T 14-10-2018 IPR039532 Transcriptional regulator TetR, C-terminal, Firmicutes type GYO_0711 7a88cdb2d06e590aca2489e1e935472d 181 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 36 59 1.9E-5 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 GYO_0711 7a88cdb2d06e590aca2489e1e935472d 181 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 15 28 1.9E-5 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 GYO_0711 7a88cdb2d06e590aca2489e1e935472d 181 SUPERFAMILY SSF46689 5 71 2.98E-16 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 GYO_0711 7a88cdb2d06e590aca2489e1e935472d 181 Pfam PF00440 Bacterial regulatory proteins, tetR family 18 59 1.6E-9 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 GYO_0711 7a88cdb2d06e590aca2489e1e935472d 181 Gene3D G3DSA:1.10.357.10 4 175 1.3E-47 T 14-10-2018 GYO_0499 153043bb3a5f1ba479292bf5e2a99379 400 Gene3D G3DSA:1.20.1250.20 9 400 1.8E-87 T 14-10-2018 GYO_0499 153043bb3a5f1ba479292bf5e2a99379 400 SUPERFAMILY SSF103473 8 400 8.5E-86 T 14-10-2018 IPR036259 MFS transporter superfamily GYO_0499 153043bb3a5f1ba479292bf5e2a99379 400 Pfam PF07690 Major Facilitator Superfamily 21 266 2.0E-38 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 GYO_0499 153043bb3a5f1ba479292bf5e2a99379 400 ProSitePatterns PS00217 Sugar transport proteins signature 2. 108 133 - T 14-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 GYO_1179 3d79657c8ee85cea9fb877717110b8ea 386 Pfam PF08331 Domain of unknown function (DUF1730) 57 135 5.3E-18 T 14-10-2018 IPR013542 Domain of unknown function DUF1730 MetaCyc: PWY-6700 GYO_1179 3d79657c8ee85cea9fb877717110b8ea 386 SUPERFAMILY SSF54862 164 250 2.43E-14 T 14-10-2018 GYO_1179 3d79657c8ee85cea9fb877717110b8ea 386 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 188 199 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site GYO_1179 3d79657c8ee85cea9fb877717110b8ea 386 TIGRFAM TIGR00276 TIGR00276: epoxyqueuosine reductase 11 342 2.5E-126 T 14-10-2018 IPR004453 Epoxyqueuosine reductase QueG GO:0008033|GO:0008616|GO:0016491 MetaCyc: PWY-6700 GYO_1179 3d79657c8ee85cea9fb877717110b8ea 386 SUPERFAMILY SSF48371 265 372 4.39E-12 T 14-10-2018 IPR016024 Armadillo-type fold GYO_1179 3d79657c8ee85cea9fb877717110b8ea 386 Pfam PF13646 HEAT repeats 300 369 7.7E-12 T 14-10-2018 GYO_1179 3d79657c8ee85cea9fb877717110b8ea 386 Gene3D G3DSA:1.25.10.10 293 379 5.1E-11 T 14-10-2018 IPR011989 Armadillo-like helical GYO_1179 3d79657c8ee85cea9fb877717110b8ea 386 Hamap MF_00916 Epoxyqueuosine reductase [queG]. 3 309 42.386 T 14-10-2018 IPR004453 Epoxyqueuosine reductase QueG GO:0008033|GO:0008616|GO:0016491 MetaCyc: PWY-6700 GYO_1179 3d79657c8ee85cea9fb877717110b8ea 386 Pfam PF13484 4Fe-4S double cluster binding domain 188 250 2.2E-17 T 14-10-2018 GYO_1179 3d79657c8ee85cea9fb877717110b8ea 386 SMART SM00567 E-Z type HEAT repeats 330 359 1.0E-4 T 14-10-2018 IPR004155 PBS lyase HEAT-like repeat Reactome: R-HSA-204626 GYO_1179 3d79657c8ee85cea9fb877717110b8ea 386 SMART SM00567 E-Z type HEAT repeats 298 327 75.0 T 14-10-2018 IPR004155 PBS lyase HEAT-like repeat Reactome: R-HSA-204626 GYO_3230 3dd1fd0b2a20b1571da3331a02eee264 269 Pfam PF07285 Protein of unknown function (DUF1444) 3 267 7.0E-130 T 14-10-2018 IPR010838 Protein of unknown unction DUF1444 GYO_3230 3dd1fd0b2a20b1571da3331a02eee264 269 Hamap MF_01548 UPF0354 protein . 3 268 47.76 T 14-10-2018 IPR010838 Protein of unknown unction DUF1444 GYO_3230 3dd1fd0b2a20b1571da3331a02eee264 269 PIRSF PIRSF012562 1 268 7.3E-140 T 14-10-2018 IPR010838 Protein of unknown unction DUF1444 GYO_3125 c849c6c2dbff530168745c07334e970c 433 Gene3D G3DSA:3.40.190.10 21 433 1.3E-66 T 14-10-2018 GYO_3125 c849c6c2dbff530168745c07334e970c 433 SUPERFAMILY SSF53850 33 431 2.8E-63 T 14-10-2018 GYO_3125 c849c6c2dbff530168745c07334e970c 433 Pfam PF01547 Bacterial extracellular solute-binding protein 45 335 3.1E-46 T 14-10-2018 IPR006059 Bacterial extracellular solute-binding protein GYO_0575 c939596e0f5877c5d00085b76a4aef9f 234 SUPERFAMILY SSF161098 25 230 1.28E-46 T 14-10-2018 IPR035906 MetI-like superfamily GYO_0575 c939596e0f5877c5d00085b76a4aef9f 234 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 46 229 1.3E-25 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 GYO_0575 c939596e0f5877c5d00085b76a4aef9f 234 Gene3D G3DSA:1.10.3720.10 19 231 1.7E-53 T 14-10-2018 IPR035906 MetI-like superfamily GYO_0575 c939596e0f5877c5d00085b76a4aef9f 234 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 25 122 3.4E-30 T 14-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 GYO_2705 dbd23060207ff71dacab39c531dd2c63 185 TIGRFAM TIGR00038 efp: translation elongation factor P 2 185 2.1E-80 T 14-10-2018 IPR011768 Translation elongation factor P GO:0003746|GO:0005737|GO:0006414 GYO_2705 dbd23060207ff71dacab39c531dd2c63 185 Gene3D G3DSA:2.30.30.30 1 62 9.1E-32 T 14-10-2018 IPR014722 Ribosomal protein L2, domain 2 GYO_2705 dbd23060207ff71dacab39c531dd2c63 185 SMART SM01185 67 121 1.4E-24 T 14-10-2018 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 GYO_2705 dbd23060207ff71dacab39c531dd2c63 185 Pfam PF01132 Elongation factor P (EF-P) OB domain 68 120 3.1E-20 T 14-10-2018 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 GYO_2705 dbd23060207ff71dacab39c531dd2c63 185 PIRSF PIRSF005901 1 185 1.1E-71 T 14-10-2018 IPR020599 Translation elongation factor P/YeiP GYO_2705 dbd23060207ff71dacab39c531dd2c63 185 Hamap MF_00141 Elongation factor P [efp]. 1 185 50.493 T 14-10-2018 IPR011768 Translation elongation factor P GO:0003746|GO:0005737|GO:0006414 GYO_2705 dbd23060207ff71dacab39c531dd2c63 185 Gene3D G3DSA:2.40.50.140 128 185 1.2E-26 T 14-10-2018 GYO_2705 dbd23060207ff71dacab39c531dd2c63 185 SUPERFAMILY SSF50249 65 129 5.83E-20 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold GYO_2705 dbd23060207ff71dacab39c531dd2c63 185 ProSitePatterns PS01275 Elongation factor P signature. 150 169 - T 14-10-2018 IPR013852 Translation elongation factor P/YeiP, conserved site GYO_2705 dbd23060207ff71dacab39c531dd2c63 185 SUPERFAMILY SSF50249 128 185 1.29E-18 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold GYO_2705 dbd23060207ff71dacab39c531dd2c63 185 SMART SM00841 129 184 5.6E-33 T 14-10-2018 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 GYO_2705 dbd23060207ff71dacab39c531dd2c63 185 SUPERFAMILY SSF50104 1 62 4.63E-22 T 14-10-2018 IPR008991 Translation protein SH3-like domain superfamily GYO_2705 dbd23060207ff71dacab39c531dd2c63 185 Pfam PF08207 Elongation factor P (EF-P) KOW-like domain 3 60 7.3E-29 T 14-10-2018 IPR013185 Translation elongation factor, KOW-like GYO_2705 dbd23060207ff71dacab39c531dd2c63 185 Gene3D G3DSA:2.40.50.140 64 127 2.1E-25 T 14-10-2018 GYO_2705 dbd23060207ff71dacab39c531dd2c63 185 Pfam PF09285 Elongation factor P, C-terminal 129 184 4.0E-26 T 14-10-2018 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 GYO_0982 7de2f9ce124e9531a2d06b5ae1f15b75 167 Gene3D G3DSA:1.10.10.10 12 155 1.3E-31 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily GYO_0982 7de2f9ce124e9531a2d06b5ae1f15b75 167 ProSitePatterns PS01117 MarR-type HTH domain signature. 87 121 - T 14-10-2018 IPR023187 Transcriptional regulator MarR-type, conserved site GYO_0982 7de2f9ce124e9531a2d06b5ae1f15b75 167 SUPERFAMILY SSF46785 25 162 3.67E-29 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily GYO_0982 7de2f9ce124e9531a2d06b5ae1f15b75 167 SMART SM00347 46 148 3.2E-31 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 GYO_0982 7de2f9ce124e9531a2d06b5ae1f15b75 167 Pfam PF01047 MarR family 53 112 1.1E-15 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 GYO_0982 7de2f9ce124e9531a2d06b5ae1f15b75 167 PRINTS PR00598 Bacterial regulatory protein MarR family signature 89 104 1.7E-13 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 GYO_0982 7de2f9ce124e9531a2d06b5ae1f15b75 167 PRINTS PR00598 Bacterial regulatory protein MarR family signature 138 158 1.7E-13 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 GYO_0982 7de2f9ce124e9531a2d06b5ae1f15b75 167 PRINTS PR00598 Bacterial regulatory protein MarR family signature 108 124 1.7E-13 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 GYO_0982 7de2f9ce124e9531a2d06b5ae1f15b75 167 PRINTS PR00598 Bacterial regulatory protein MarR family signature 72 88 1.7E-13 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 GYO_1078 986c07c46865fb3585d7b6542c107d7c 458 TIGRFAM TIGR01350 lipoamide_DH: dihydrolipoyl dehydrogenase 3 457 2.7E-166 T 14-10-2018 IPR006258 Dihydrolipoamide dehydrogenase GO:0004148|GO:0050660|GO:0055114 KEGG: 00010+1.8.1.4|KEGG: 00020+1.8.1.4|KEGG: 00260+1.8.1.4|KEGG: 00280+1.8.1.4|KEGG: 00620+1.8.1.4|KEGG: 00640+1.8.1.4|MetaCyc: PWY-5046|MetaCyc: PWY-5084|Reactome: R-HSA-204174|Reactome: R-HSA-389661|Reactome: R-HSA-5362517|Reactome: R-HSA-6783984|Reactome: R-HSA-70268|Reactome: R-HSA-70895|Reactome: R-HSA-71064|Reactome: R-HSA-71403 GYO_1078 986c07c46865fb3585d7b6542c107d7c 458 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 339 447 1.7E-34 T 14-10-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 GYO_1078 986c07c46865fb3585d7b6542c107d7c 458 SUPERFAMILY SSF51905 3 329 2.29E-60 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily GYO_1078 986c07c46865fb3585d7b6542c107d7c 458 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 35 45 - T 14-10-2018 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 GYO_1078 986c07c46865fb3585d7b6542c107d7c 458 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 34 49 2.7E-64 T 14-10-2018 GYO_1078 986c07c46865fb3585d7b6542c107d7c 458 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 400 415 2.7E-64 T 14-10-2018 GYO_1078 986c07c46865fb3585d7b6542c107d7c 458 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 172 197 2.7E-64 T 14-10-2018 GYO_1078 986c07c46865fb3585d7b6542c107d7c 458 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 258 272 2.7E-64 T 14-10-2018 GYO_1078 986c07c46865fb3585d7b6542c107d7c 458 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 335 356 2.7E-64 T 14-10-2018 GYO_1078 986c07c46865fb3585d7b6542c107d7c 458 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 422 442 2.7E-64 T 14-10-2018 GYO_1078 986c07c46865fb3585d7b6542c107d7c 458 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 300 307 2.7E-64 T 14-10-2018 GYO_1078 986c07c46865fb3585d7b6542c107d7c 458 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 2 24 2.7E-64 T 14-10-2018 GYO_1078 986c07c46865fb3585d7b6542c107d7c 458 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 136 145 2.7E-64 T 14-10-2018 GYO_1078 986c07c46865fb3585d7b6542c107d7c 458 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 3 22 4.1E-38 T 14-10-2018 GYO_1078 986c07c46865fb3585d7b6542c107d7c 458 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 133 151 4.1E-38 T 14-10-2018 GYO_1078 986c07c46865fb3585d7b6542c107d7c 458 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 172 190 4.1E-38 T 14-10-2018 GYO_1078 986c07c46865fb3585d7b6542c107d7c 458 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 285 307 4.1E-38 T 14-10-2018 GYO_1078 986c07c46865fb3585d7b6542c107d7c 458 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 257 273 4.1E-38 T 14-10-2018 GYO_1078 986c07c46865fb3585d7b6542c107d7c 458 Gene3D G3DSA:3.50.50.60 151 270 7.3E-115 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily GYO_1078 986c07c46865fb3585d7b6542c107d7c 458 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 3 320 1.1E-67 T 14-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 GYO_1078 986c07c46865fb3585d7b6542c107d7c 458 SUPERFAMILY SSF55424 336 457 4.64E-35 T 14-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 GYO_1078 986c07c46865fb3585d7b6542c107d7c 458 Gene3D G3DSA:3.30.390.30 338 458 7.4E-38 T 14-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 GYO_1078 986c07c46865fb3585d7b6542c107d7c 458 Gene3D G3DSA:3.50.50.60 3 326 7.3E-115 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily GYO_1078 986c07c46865fb3585d7b6542c107d7c 458 PIRSF PIRSF000350 1 451 4.2E-86 T 14-10-2018 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I GO:0009055|GO:0016491 GYO_0900 71f9a1039372a678c38910ecb3b132f2 183 Hamap MF_01515 UPF0316 protein . 9 177 30.803 T 14-10-2018 IPR022930 Protein of unknown function UPF0316 GYO_0900 71f9a1039372a678c38910ecb3b132f2 183 Pfam PF10035 Uncharacterized protein conserved in bacteria (DUF2179) 117 169 3.6E-6 T 14-10-2018 IPR019264 Domain of unknown function DUF2179 GYO_2632 5d90ebc97f009d0a1fe0aad5058aa01b 414 Pfam PF00817 impB/mucB/samB family 11 158 4.7E-51 T 14-10-2018 IPR001126 UmuC domain GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 GYO_2632 5d90ebc97f009d0a1fe0aad5058aa01b 414 SUPERFAMILY SSF56672 4 238 2.49E-83 T 14-10-2018 GYO_2632 5d90ebc97f009d0a1fe0aad5058aa01b 414 Gene3D G3DSA:3.30.1490.100 247 354 1.1E-24 T 14-10-2018 IPR036775 DNA polymerase, Y-family, little finger domain superfamily GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 GYO_2632 5d90ebc97f009d0a1fe0aad5058aa01b 414 Gene3D G3DSA:3.30.70.270 8 168 2.6E-59 T 14-10-2018 GYO_2632 5d90ebc97f009d0a1fe0aad5058aa01b 414 SUPERFAMILY SSF100879 245 343 3.14E-24 T 14-10-2018 IPR036775 DNA polymerase, Y-family, little finger domain superfamily GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 GYO_2632 5d90ebc97f009d0a1fe0aad5058aa01b 414 PIRSF PIRSF036603 123 414 3.3E-18 T 14-10-2018 GYO_2632 5d90ebc97f009d0a1fe0aad5058aa01b 414 PIRSF PIRSF036603 1 124 3.2E-24 T 14-10-2018 GYO_2632 5d90ebc97f009d0a1fe0aad5058aa01b 414 Hamap MF_01113 DNA polymerase IV [dinB]. 5 357 39.031 T 14-10-2018 IPR022880 DNA polymerase IV GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5655862|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210 GYO_2632 5d90ebc97f009d0a1fe0aad5058aa01b 414 Pfam PF11799 impB/mucB/samB family C-terminal domain 247 351 4.9E-17 T 14-10-2018 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 GYO_2632 5d90ebc97f009d0a1fe0aad5058aa01b 414 Gene3D G3DSA:2.30.40.20 25 78 2.6E-59 T 14-10-2018 GYO_2632 5d90ebc97f009d0a1fe0aad5058aa01b 414 Gene3D G3DSA:1.10.150.20 180 233 6.4E-17 T 14-10-2018 GYO_2632 5d90ebc97f009d0a1fe0aad5058aa01b 414 Pfam PF11798 IMS family HHH motif 173 201 8.9E-9 T 14-10-2018 IPR024728 DNA polymerase type-Y, HhH motif KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5655862|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210 GYO_4348 2ba6cc29f79f2416ad807657aeba2ec5 393 Pfam PF07662 Na+ dependent nucleoside transporter C-terminus 192 392 3.8E-61 T 14-10-2018 IPR011657 Concentrative nucleoside transporter C-terminal domain Reactome: R-HSA-83936 GYO_4348 2ba6cc29f79f2416ad807657aeba2ec5 393 Pfam PF01773 Na+ dependent nucleoside transporter N-terminus 8 81 4.9E-20 T 14-10-2018 IPR002668 Concentrative nucleoside transporter N-terminal domain Reactome: R-HSA-83936 GYO_4348 2ba6cc29f79f2416ad807657aeba2ec5 393 TIGRFAM TIGR00804 nupC: nucleoside transporter, NupC family 4 392 6.2E-145 T 14-10-2018 IPR018270 Concentrative nucleoside transporter, metazoan/bacterial GO:0005337|GO:0016020|GO:1901642 Reactome: R-HSA-83936 GYO_2188 31eccf13f3b45fd69fdf91ea82d7e1de 399 SUPERFAMILY SSF64182 3 304 6.93E-32 T 14-10-2018 IPR038763 DHH phosphoesterase superfamily GYO_2188 31eccf13f3b45fd69fdf91ea82d7e1de 399 Gene3D G3DSA:3.10.310.30 250 303 6.4E-11 T 14-10-2018 GYO_2188 31eccf13f3b45fd69fdf91ea82d7e1de 399 Gene3D G3DSA:3.90.1640.10 6 142 1.6E-6 T 14-10-2018 GYO_1388 adb26ab1a2ce75c4c58d51a7d26c3f28 456 Pfam PF01554 MatE 28 188 4.0E-33 T 14-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 GYO_1388 adb26ab1a2ce75c4c58d51a7d26c3f28 456 Pfam PF01554 MatE 253 414 3.1E-34 T 14-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 GYO_1388 adb26ab1a2ce75c4c58d51a7d26c3f28 456 TIGRFAM TIGR00797 matE: MATE efflux family protein 28 427 3.8E-60 T 14-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 GYO_1388 adb26ab1a2ce75c4c58d51a7d26c3f28 456 PIRSF PIRSF006603 8 456 1.0E-82 T 14-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 GYO_3732 aa31b23a25eae5f313aa1396761b975e 240 Gene3D G3DSA:3.40.50.10420 46 238 1.1E-35 T 14-10-2018 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain superfamily GYO_3732 aa31b23a25eae5f313aa1396761b975e 240 Pfam PF02589 LUD domain 87 237 1.6E-30 T 14-10-2018 IPR003741 LUD domain GYO_3732 aa31b23a25eae5f313aa1396761b975e 240 SUPERFAMILY SSF100950 47 237 1.05E-41 T 14-10-2018 IPR037171 NagB/RpiA transferase-like GYO_3732 aa31b23a25eae5f313aa1396761b975e 240 Hamap MF_02104 Lactate utilization protein C [lutC]. 5 237 49.782 T 14-10-2018 IPR022823 Lactate utilization protein C GYO_2780 bf9c0881437d017722eb9cc81e8ead93 314 TIGRFAM TIGR00216 ispH_lytB: 4-hydroxy-3-methylbut-2-enyl diphosphate reductase 3 286 1.7E-99 T 14-10-2018 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 KEGG: 00900+1.17.7.4|MetaCyc: PWY-7560 GYO_2780 bf9c0881437d017722eb9cc81e8ead93 314 Gene3D G3DSA:3.40.1010.20 7 284 1.0E-96 T 14-10-2018 GYO_2780 bf9c0881437d017722eb9cc81e8ead93 314 Pfam PF02401 LytB protein 4 284 1.3E-81 T 14-10-2018 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 KEGG: 00900+1.17.7.4|MetaCyc: PWY-7560 GYO_2780 bf9c0881437d017722eb9cc81e8ead93 314 Gene3D G3DSA:3.40.50.11270 12 103 1.0E-96 T 14-10-2018 GYO_2780 bf9c0881437d017722eb9cc81e8ead93 314 Gene3D G3DSA:3.40.1010.20 104 197 1.0E-96 T 14-10-2018 GYO_2780 bf9c0881437d017722eb9cc81e8ead93 314 Hamap MF_00191 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [ispH]. 1 288 33.286 T 14-10-2018 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 KEGG: 00900+1.17.7.4|MetaCyc: PWY-7560 GYO_1320 2abcfe5080c0a985f173a4e2955cfef0 429 ProSitePatterns PS00713 Sodium:dicarboxylate symporter family signature 1. 38 53 - T 14-10-2018 IPR018107 Sodium:dicarboxylate symporter, conserved site GYO_1320 2abcfe5080c0a985f173a4e2955cfef0 429 Gene3D G3DSA:1.10.3860.10 1 422 8.6E-136 T 14-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 GYO_1320 2abcfe5080c0a985f173a4e2955cfef0 429 PRINTS PR00173 Glutamate-aspartate symporter signature 295 321 2.8E-45 T 14-10-2018 GYO_1320 2abcfe5080c0a985f173a4e2955cfef0 429 PRINTS PR00173 Glutamate-aspartate symporter signature 330 349 2.8E-45 T 14-10-2018 GYO_1320 2abcfe5080c0a985f173a4e2955cfef0 429 PRINTS PR00173 Glutamate-aspartate symporter signature 357 377 2.8E-45 T 14-10-2018 GYO_1320 2abcfe5080c0a985f173a4e2955cfef0 429 PRINTS PR00173 Glutamate-aspartate symporter signature 195 214 2.8E-45 T 14-10-2018 GYO_1320 2abcfe5080c0a985f173a4e2955cfef0 429 PRINTS PR00173 Glutamate-aspartate symporter signature 2 22 2.8E-45 T 14-10-2018 GYO_1320 2abcfe5080c0a985f173a4e2955cfef0 429 PRINTS PR00173 Glutamate-aspartate symporter signature 148 170 2.8E-45 T 14-10-2018 GYO_1320 2abcfe5080c0a985f173a4e2955cfef0 429 PRINTS PR00173 Glutamate-aspartate symporter signature 225 244 2.8E-45 T 14-10-2018 GYO_1320 2abcfe5080c0a985f173a4e2955cfef0 429 PRINTS PR00173 Glutamate-aspartate symporter signature 46 66 2.8E-45 T 14-10-2018 GYO_1320 2abcfe5080c0a985f173a4e2955cfef0 429 PRINTS PR00173 Glutamate-aspartate symporter signature 76 101 2.8E-45 T 14-10-2018 GYO_1320 2abcfe5080c0a985f173a4e2955cfef0 429 ProSitePatterns PS00714 Sodium:dicarboxylate symporter family signature 2. 298 321 - T 14-10-2018 IPR018107 Sodium:dicarboxylate symporter, conserved site GYO_1320 2abcfe5080c0a985f173a4e2955cfef0 429 SUPERFAMILY SSF118215 8 404 5.23E-123 T 14-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 GYO_1320 2abcfe5080c0a985f173a4e2955cfef0 429 Pfam PF00375 Sodium:dicarboxylate symporter family 8 403 9.8E-126 T 14-10-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 GYO_4311 a202c9613ad5e6e43ac242a885a7c2a7 426 TIGRFAM TIGR00784 citMHS: citrate transporter 2 426 1.5E-236 T 14-10-2018 IPR014738 Citrate transporter GO:0015137|GO:0015746 GYO_4311 a202c9613ad5e6e43ac242a885a7c2a7 426 Pfam PF03600 Citrate transporter 13 372 2.2E-53 T 14-10-2018 IPR004680 Citrate transporter-like domain GO:0016021|GO:0055085 Reactome: R-HSA-5662702 GYO_2890 c96db1d6d5ed8203ca9dd39149926b01 154 Gene3D G3DSA:1.20.120.450 1 145 1.8E-11 T 14-10-2018 IPR034660 DinB/YfiT-like putative metalloenzymes GYO_2890 c96db1d6d5ed8203ca9dd39149926b01 154 Pfam PF12867 DinB superfamily 9 142 2.1E-16 T 14-10-2018 IPR024775 DinB-like domain GYO_2890 c96db1d6d5ed8203ca9dd39149926b01 154 SUPERFAMILY SSF109854 5 144 5.31E-17 T 14-10-2018 IPR034660 DinB/YfiT-like putative metalloenzymes GYO_2965 f6f11dc9f867ae8f8fe9873e9e06ccc2 379 Gene3D G3DSA:3.40.640.10 2 245 1.2E-95 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 GYO_2965 f6f11dc9f867ae8f8fe9873e9e06ccc2 379 ProSitePatterns PS00868 Cys/Met metabolism enzymes pyridoxal-phosphate attachment site. 187 201 - T 14-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 GYO_2965 f6f11dc9f867ae8f8fe9873e9e06ccc2 379 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 4 377 1.7E-162 T 14-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 GYO_2965 f6f11dc9f867ae8f8fe9873e9e06ccc2 379 SUPERFAMILY SSF53383 8 378 3.06E-123 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase GYO_2965 f6f11dc9f867ae8f8fe9873e9e06ccc2 379 Gene3D G3DSA:3.90.1150.10 246 379 2.7E-54 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 GYO_2965 f6f11dc9f867ae8f8fe9873e9e06ccc2 379 PIRSF PIRSF001434 1 379 5.9E-151 T 14-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 GYO_2367 58f5f75b2d7a2e2c26c9dd2eeddaa3e0 273 Gene3D G3DSA:3.30.1380.10 57 273 9.2E-98 T 14-10-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 GYO_2367 58f5f75b2d7a2e2c26c9dd2eeddaa3e0 273 SUPERFAMILY SSF55166 108 258 5.49E-42 T 14-10-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 GYO_2367 58f5f75b2d7a2e2c26c9dd2eeddaa3e0 273 Pfam PF02557 D-alanyl-D-alanine carboxypeptidase 121 250 6.9E-47 T 14-10-2018 IPR003709 Peptidase M15B GO:0006508|GO:0008233 GYO_1262 b01fdf7df78e2e3be4efd3c2e074b8cb 585 Pfam PF00664 ABC transporter transmembrane region 20 292 1.1E-42 T 14-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 GYO_1262 b01fdf7df78e2e3be4efd3c2e074b8cb 585 SUPERFAMILY SSF52540 330 574 4.67E-84 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase GYO_1262 b01fdf7df78e2e3be4efd3c2e074b8cb 585 Gene3D G3DSA:1.20.1560.10 2 320 4.8E-77 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 GYO_1262 b01fdf7df78e2e3be4efd3c2e074b8cb 585 Pfam PF00005 ABC transporter 355 501 1.6E-32 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 GYO_1262 b01fdf7df78e2e3be4efd3c2e074b8cb 585 ProSitePatterns PS00211 ABC transporters family signature. 475 489 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 GYO_1262 b01fdf7df78e2e3be4efd3c2e074b8cb 585 SMART SM00382 363 555 1.0E-12 T 14-10-2018 IPR003593 AAA+ ATPase domain GYO_1262 b01fdf7df78e2e3be4efd3c2e074b8cb 585 Gene3D G3DSA:3.40.50.300 329 581 1.5E-83 T 14-10-2018 GYO_1262 b01fdf7df78e2e3be4efd3c2e074b8cb 585 SUPERFAMILY SSF90123 6 324 6.54E-71 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 GYO_3703 982082436986eabacbc2ca362b43253c 222 SUPERFAMILY SSF161098 16 199 5.1E-36 T 14-10-2018 IPR035906 MetI-like superfamily GYO_3703 982082436986eabacbc2ca362b43253c 222 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 40 209 9.0E-23 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 GYO_3703 982082436986eabacbc2ca362b43253c 222 Gene3D G3DSA:1.10.3720.10 14 210 4.6E-32 T 14-10-2018 IPR035906 MetI-like superfamily GYO_0157 70d667527275a417bc70c7d128711e46 179 Pfam PF00347 Ribosomal protein L6 11 83 3.6E-24 T 14-10-2018 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 GYO_0157 70d667527275a417bc70c7d128711e46 179 Pfam PF00347 Ribosomal protein L6 91 165 8.1E-21 T 14-10-2018 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 GYO_0157 70d667527275a417bc70c7d128711e46 179 Gene3D G3DSA:3.90.930.12 84 179 4.4E-40 T 14-10-2018 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 GYO_0157 70d667527275a417bc70c7d128711e46 179 Hamap MF_01365_B 50S ribosomal protein L6 [rplF]. 1 177 38.887 T 14-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 GYO_0157 70d667527275a417bc70c7d128711e46 179 PRINTS PR00059 Ribosomal protein L6 signature 142 163 1.7E-34 T 14-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 GYO_0157 70d667527275a417bc70c7d128711e46 179 PRINTS PR00059 Ribosomal protein L6 signature 100 116 1.7E-34 T 14-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 GYO_0157 70d667527275a417bc70c7d128711e46 179 PRINTS PR00059 Ribosomal protein L6 signature 72 97 1.7E-34 T 14-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 GYO_0157 70d667527275a417bc70c7d128711e46 179 SUPERFAMILY SSF56053 1 83 2.73E-27 T 14-10-2018 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 GYO_0157 70d667527275a417bc70c7d128711e46 179 TIGRFAM TIGR03654 L6_bact: ribosomal protein uL6 2 177 5.5E-76 T 14-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 GYO_0157 70d667527275a417bc70c7d128711e46 179 ProSitePatterns PS00525 Ribosomal protein L6 signature 1. 155 163 - T 14-10-2018 IPR002358 Ribosomal protein L6, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 GYO_0157 70d667527275a417bc70c7d128711e46 179 PIRSF PIRSF002162 1 178 1.2E-46 T 14-10-2018 IPR000702 Ribosomal protein L6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 GYO_0157 70d667527275a417bc70c7d128711e46 179 SUPERFAMILY SSF56053 84 177 3.17E-34 T 14-10-2018 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 GYO_0157 70d667527275a417bc70c7d128711e46 179 Gene3D G3DSA:3.90.930.12 2 83 1.4E-31 T 14-10-2018 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 GYO_1454 30f9106f305ac07d1da53069c9c199f0 131 Pfam PF03960 ArsC family 5 113 8.2E-24 T 14-10-2018 IPR006660 Arsenate reductase-like GYO_1454 30f9106f305ac07d1da53069c9c199f0 131 Hamap MF_01132 Regulatory protein Spx [spxA]. 1 131 39.797 T 14-10-2018 IPR023731 Regulatory protein Spx GO:0045892 GYO_1454 30f9106f305ac07d1da53069c9c199f0 131 TIGRFAM TIGR01617 arsC_related: transcriptional regulator, Spx/MgsR family 3 114 1.1E-36 T 14-10-2018 IPR006504 Transcriptional regulator Spx/MgsR GYO_1454 30f9106f305ac07d1da53069c9c199f0 131 Gene3D G3DSA:3.40.30.10 1 131 1.1E-47 T 14-10-2018 GYO_1454 30f9106f305ac07d1da53069c9c199f0 131 SUPERFAMILY SSF52833 1 128 2.31E-40 T 14-10-2018 IPR036249 Thioredoxin-like superfamily GYO_1129 91c51c735625a4f9131644c3733981a2 861 Pfam PF09586 Bacterial membrane protein YfhO 16 842 5.0E-186 T 14-10-2018 IPR018580 Uncharacterised protein family YfhO GYO_1452 f66b5e04ea25f32680af24ed5b503af0 374 Pfam PF07690 Major Facilitator Superfamily 10 210 3.8E-10 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 GYO_1452 f66b5e04ea25f32680af24ed5b503af0 374 SUPERFAMILY SSF103473 8 364 2.75E-34 T 14-10-2018 IPR036259 MFS transporter superfamily GYO_1452 f66b5e04ea25f32680af24ed5b503af0 374 Gene3D G3DSA:1.20.1250.20 4 363 2.6E-27 T 14-10-2018 GYO_3949 ac748142d65aa97fc24cfc38172ad67a 393 TIGRFAM TIGR04012 poly_gGlu_PgsB: poly-gamma-glutamate synthase PgsB 2 383 9.9E-174 T 14-10-2018 IPR008337 Capsule biosynthesis protein CapB GO:0016020|GO:0045227 GYO_3949 ac748142d65aa97fc24cfc38172ad67a 393 Pfam PF08245 Mur ligase middle domain 37 200 1.4E-9 T 14-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 GYO_3949 ac748142d65aa97fc24cfc38172ad67a 393 SUPERFAMILY SSF53623 33 235 5.23E-18 T 14-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 GYO_3949 ac748142d65aa97fc24cfc38172ad67a 393 PRINTS PR01758 Capsule biosynthesis protein CapB signature 111 126 3.4E-109 T 14-10-2018 IPR008337 Capsule biosynthesis protein CapB GO:0016020|GO:0045227 GYO_3949 ac748142d65aa97fc24cfc38172ad67a 393 PRINTS PR01758 Capsule biosynthesis protein CapB signature 57 74 3.4E-109 T 14-10-2018 IPR008337 Capsule biosynthesis protein CapB GO:0016020|GO:0045227 GYO_3949 ac748142d65aa97fc24cfc38172ad67a 393 PRINTS PR01758 Capsule biosynthesis protein CapB signature 196 213 3.4E-109 T 14-10-2018 IPR008337 Capsule biosynthesis protein CapB GO:0016020|GO:0045227 GYO_3949 ac748142d65aa97fc24cfc38172ad67a 393 PRINTS PR01758 Capsule biosynthesis protein CapB signature 140 155 3.4E-109 T 14-10-2018 IPR008337 Capsule biosynthesis protein CapB GO:0016020|GO:0045227 GYO_3949 ac748142d65aa97fc24cfc38172ad67a 393 PRINTS PR01758 Capsule biosynthesis protein CapB signature 258 275 3.4E-109 T 14-10-2018 IPR008337 Capsule biosynthesis protein CapB GO:0016020|GO:0045227 GYO_3949 ac748142d65aa97fc24cfc38172ad67a 393 PRINTS PR01758 Capsule biosynthesis protein CapB signature 162 179 3.4E-109 T 14-10-2018 IPR008337 Capsule biosynthesis protein CapB GO:0016020|GO:0045227 GYO_3949 ac748142d65aa97fc24cfc38172ad67a 393 PRINTS PR01758 Capsule biosynthesis protein CapB signature 293 308 3.4E-109 T 14-10-2018 IPR008337 Capsule biosynthesis protein CapB GO:0016020|GO:0045227 GYO_3949 ac748142d65aa97fc24cfc38172ad67a 393 PRINTS PR01758 Capsule biosynthesis protein CapB signature 362 378 3.4E-109 T 14-10-2018 IPR008337 Capsule biosynthesis protein CapB GO:0016020|GO:0045227 GYO_3949 ac748142d65aa97fc24cfc38172ad67a 393 PRINTS PR01758 Capsule biosynthesis protein CapB signature 34 50 3.4E-109 T 14-10-2018 IPR008337 Capsule biosynthesis protein CapB GO:0016020|GO:0045227 GYO_3949 ac748142d65aa97fc24cfc38172ad67a 393 PRINTS PR01758 Capsule biosynthesis protein CapB signature 77 95 3.4E-109 T 14-10-2018 IPR008337 Capsule biosynthesis protein CapB GO:0016020|GO:0045227 GYO_3949 ac748142d65aa97fc24cfc38172ad67a 393 Gene3D G3DSA:3.40.1190.10 30 238 4.5E-16 T 14-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 GYO_4287 93d37fa1f91398345d5bafcb9ce98cd2 485 Pfam PF00171 Aldehyde dehydrogenase family 15 474 1.6E-154 T 14-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 GYO_4287 93d37fa1f91398345d5bafcb9ce98cd2 485 Gene3D G3DSA:3.40.605.10 12 255 1.1E-161 T 14-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 GYO_4287 93d37fa1f91398345d5bafcb9ce98cd2 485 SUPERFAMILY SSF53720 7 477 8.51E-141 T 14-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 GYO_4287 93d37fa1f91398345d5bafcb9ce98cd2 485 Gene3D G3DSA:3.40.309.10 256 436 1.1E-161 T 14-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 GYO_4287 93d37fa1f91398345d5bafcb9ce98cd2 485 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 252 259 - T 14-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 GYO_1569 fd39584e3f175ceb763f0874f5080a0b 265 Pfam PF03592 Terminase small subunit 67 235 1.3E-42 T 14-10-2018 IPR005335 Terminase small subunit GO:0006323 GYO_1569 fd39584e3f175ceb763f0874f5080a0b 265 Pfam PF10668 Phage terminase small subunit 5 49 1.4E-10 T 14-10-2018 IPR018925 Phage terminase small subunit GYO_1569 fd39584e3f175ceb763f0874f5080a0b 265 Gene3D G3DSA:1.10.10.1400 62 127 2.8E-19 T 14-10-2018 IPR038713 Terminase small subunit, N-terminal domain superfamily GYO_2968 22868ea096612d187198687dbaad4745 213 Gene3D G3DSA:3.40.50.150 24 213 1.2E-45 T 14-10-2018 GYO_2968 22868ea096612d187198687dbaad4745 213 SUPERFAMILY SSF53335 7 209 1.15E-31 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase GYO_2968 22868ea096612d187198687dbaad4745 213 SMART SM00650 37 151 0.0045 T 14-10-2018 IPR020598 Ribosomal RNA adenine methylase transferase, N-terminal GO:0000154|GO:0000179|GO:0008649 GYO_2968 22868ea096612d187198687dbaad4745 213 Hamap MF_02100 Uncharacterized methyltransferase . 2 213 46.284 T 14-10-2018 IPR023553 Uncharacterised methyltransferase, YrrT GO:0008168 GYO_2968 22868ea096612d187198687dbaad4745 213 Pfam PF13649 Methyltransferase domain 49 136 2.6E-14 T 14-10-2018 GYO_3078 10aae82bf7332c57f37ce2ab929d1b60 151 Pfam PF00583 Acetyltransferase (GNAT) family 42 129 5.7E-13 T 14-10-2018 IPR000182 GNAT domain GYO_3078 10aae82bf7332c57f37ce2ab929d1b60 151 Gene3D G3DSA:3.40.630.30 1 151 7.2E-45 T 14-10-2018 GYO_3078 10aae82bf7332c57f37ce2ab929d1b60 151 SUPERFAMILY SSF55729 12 146 6.35E-27 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase GYO_0965 184ab0bab8024f12e052f1368c68cda7 614 SUPERFAMILY SSF69318 133 560 1.02E-16 T 14-10-2018 GYO_0965 184ab0bab8024f12e052f1368c68cda7 614 Gene3D G3DSA:2.60.40.10 30 120 1.0E-34 T 14-10-2018 IPR013783 Immunoglobulin-like fold GYO_3811 a93c41a99a09f6499ef57127e9de889d 331 TIGRFAM TIGR01826 CofD_related: conserved hypothetical protein 21 329 5.1E-134 T 14-10-2018 IPR010119 Gluconeogenesis factor GYO_3811 a93c41a99a09f6499ef57127e9de889d 331 Gene3D G3DSA:3.40.50.12300 16 330 2.2E-133 T 14-10-2018 IPR038136 Gluconeogenesis factor superfamily GYO_3811 a93c41a99a09f6499ef57127e9de889d 331 SUPERFAMILY SSF142338 18 326 3.79E-111 T 14-10-2018 GYO_3811 a93c41a99a09f6499ef57127e9de889d 331 Hamap MF_00973 Gluconeogenesis factor. 17 331 36.962 T 14-10-2018 IPR010119 Gluconeogenesis factor GYO_3811 a93c41a99a09f6499ef57127e9de889d 331 Pfam PF01933 Uncharacterised protein family UPF0052 21 306 1.6E-109 T 14-10-2018 IPR002882 LPPG:FO 2-phospho-L-lactate transferase CofD/UPF0052 GYO_2889 a909327347a6827a1044a9b371371584 110 Gene3D G3DSA:1.20.58.1000 8 109 8.5E-32 T 14-10-2018 IPR038390 Metal-sensitive transcriptional repressor superfamily GYO_2889 a909327347a6827a1044a9b371371584 110 Pfam PF02583 Metal-sensitive transcriptional repressor 28 106 1.7E-28 T 14-10-2018 IPR003735 Metal-sensitive transcriptional repressor GO:0003677|GO:0006355|GO:0046872 GYO_0360 739446550e8b4e6e5c8190985e5b97ab 455 Gene3D G3DSA:3.30.1360.60 2 80 5.6E-24 T 14-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 GYO_0360 739446550e8b4e6e5c8190985e5b97ab 455 SUPERFAMILY SSF55604 10 82 6.15E-17 T 14-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 GYO_0360 739446550e8b4e6e5c8190985e5b97ab 455 Pfam PF00367 phosphotransferase system, EIIB 12 45 1.3E-14 T 14-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 GYO_0360 739446550e8b4e6e5c8190985e5b97ab 455 Pfam PF02378 Phosphotransferase system, EIIC 120 389 6.6E-40 T 14-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 GYO_3018 255b959d04f5c29385c7ea87db58cf4d 341 SUPERFAMILY SSF55347 129 296 7.06E-39 T 14-10-2018 GYO_3018 255b959d04f5c29385c7ea87db58cf4d 341 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 7 124 2.0E-28 T 14-10-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 GYO_3018 255b959d04f5c29385c7ea87db58cf4d 341 TIGRFAM TIGR04380 myo_inos_iolG: inositol 2-dehydrogenase 6 331 3.1E-140 T 14-10-2018 IPR030827 Inositol 2-dehydrogenase GYO_3018 255b959d04f5c29385c7ea87db58cf4d 341 Gene3D G3DSA:3.30.360.10 143 273 6.4E-111 T 14-10-2018 GYO_3018 255b959d04f5c29385c7ea87db58cf4d 341 Gene3D G3DSA:3.40.50.720 8 322 6.4E-111 T 14-10-2018 GYO_3018 255b959d04f5c29385c7ea87db58cf4d 341 Pfam PF02894 Oxidoreductase family, C-terminal alpha/beta domain 138 234 9.4E-10 T 14-10-2018 IPR004104 Oxidoreductase, C-terminal GO:0016491|GO:0055114 GYO_3018 255b959d04f5c29385c7ea87db58cf4d 341 SUPERFAMILY SSF51735 5 151 2.35E-51 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily GYO_3535 edb634eb7f367b34e61c322dadca2be9 531 Gene3D G3DSA:1.10.10.2840 402 530 5.8E-24 T 14-10-2018 GYO_3535 edb634eb7f367b34e61c322dadca2be9 531 Pfam PF13556 PucR C-terminal helix-turn-helix domain 468 525 6.7E-24 T 14-10-2018 IPR025736 PucR C-terminal helix-turn-helix domain GYO_3535 edb634eb7f367b34e61c322dadca2be9 531 Pfam PF07905 Purine catabolism regulatory protein-like family 5 124 4.5E-36 T 14-10-2018 IPR012914 Purine catabolism PurC-like domain GYO_1579 532e11aac3c403e78cec3e237e808176 466 Gene3D G3DSA:3.40.50.11790 208 379 4.8E-62 T 14-10-2018 GYO_1579 532e11aac3c403e78cec3e237e808176 466 Pfam PF17481 Phage tail sheath protein beta-sandwich domain 99 198 4.4E-9 T 14-10-2018 IPR035326 Phage tail sheath protein, beta-sandwich domain GYO_1579 532e11aac3c403e78cec3e237e808176 466 Gene3D G3DSA:1.10.10.2290 269 349 4.8E-62 T 14-10-2018 GYO_1579 532e11aac3c403e78cec3e237e808176 466 Gene3D G3DSA:3.30.360.90 396 466 3.0E-20 T 14-10-2018 GYO_1579 532e11aac3c403e78cec3e237e808176 466 ProDom PD032508 PHAGE-LIKE PBSX XKDK ELEMENT PHAGE LIN1278 SHEATH YQBL RELATED TAIL 333 465 3.0E-62 T 14-10-2018 IPR020287 Tail sheath protein, C-terminal domain GYO_1579 532e11aac3c403e78cec3e237e808176 466 Gene3D G3DSA:3.30.1490.360 26 93 3.7E-23 T 14-10-2018 GYO_1579 532e11aac3c403e78cec3e237e808176 466 Gene3D G3DSA:3.30.160.610 97 177 1.0E-25 T 14-10-2018 GYO_1579 532e11aac3c403e78cec3e237e808176 466 Pfam PF04984 Phage tail sheath protein subtilisin-like domain 204 351 6.9E-34 T 14-10-2018 IPR035089 Tail sheath protein, subtilisin-like domain GYO_1579 532e11aac3c403e78cec3e237e808176 466 Pfam PF17482 Phage tail sheath C-terminal domain 358 465 2.8E-25 T 14-10-2018 IPR020287 Tail sheath protein, C-terminal domain GYO_3627 46abf2ee29b7e679f13a4ce523f0c731 292 PRINTS PR01791 Regucalcin signature 220 233 3.5E-6 T 14-10-2018 IPR008367 Regucalcin GO:0005509|GO:0030234 KEGG: 00030+3.1.1.17|KEGG: 00053+3.1.1.17|KEGG: 00930+3.1.1.17|MetaCyc: PWY-2221|MetaCyc: PWY-5530|MetaCyc: PWY-7165 GYO_3627 46abf2ee29b7e679f13a4ce523f0c731 292 PRINTS PR01791 Regucalcin signature 120 133 3.5E-6 T 14-10-2018 IPR008367 Regucalcin GO:0005509|GO:0030234 KEGG: 00030+3.1.1.17|KEGG: 00053+3.1.1.17|KEGG: 00930+3.1.1.17|MetaCyc: PWY-2221|MetaCyc: PWY-5530|MetaCyc: PWY-7165 GYO_3627 46abf2ee29b7e679f13a4ce523f0c731 292 PRINTS PR01791 Regucalcin signature 181 199 3.5E-6 T 14-10-2018 IPR008367 Regucalcin GO:0005509|GO:0030234 KEGG: 00030+3.1.1.17|KEGG: 00053+3.1.1.17|KEGG: 00930+3.1.1.17|MetaCyc: PWY-2221|MetaCyc: PWY-5530|MetaCyc: PWY-7165 GYO_3627 46abf2ee29b7e679f13a4ce523f0c731 292 PRINTS PR01790 Senescence marker protein-30 (SMP30) family signature 90 111 1.3E-46 T 14-10-2018 IPR005511 Senescence marker protein-30 (SMP-30) GYO_3627 46abf2ee29b7e679f13a4ce523f0c731 292 PRINTS PR01790 Senescence marker protein-30 (SMP30) family signature 14 31 1.3E-46 T 14-10-2018 IPR005511 Senescence marker protein-30 (SMP-30) GYO_3627 46abf2ee29b7e679f13a4ce523f0c731 292 PRINTS PR01790 Senescence marker protein-30 (SMP30) family signature 194 211 1.3E-46 T 14-10-2018 IPR005511 Senescence marker protein-30 (SMP-30) GYO_3627 46abf2ee29b7e679f13a4ce523f0c731 292 PRINTS PR01790 Senescence marker protein-30 (SMP30) family signature 237 255 1.3E-46 T 14-10-2018 IPR005511 Senescence marker protein-30 (SMP-30) GYO_3627 46abf2ee29b7e679f13a4ce523f0c731 292 PRINTS PR01790 Senescence marker protein-30 (SMP30) family signature 154 174 1.3E-46 T 14-10-2018 IPR005511 Senescence marker protein-30 (SMP-30) GYO_3627 46abf2ee29b7e679f13a4ce523f0c731 292 PRINTS PR01790 Senescence marker protein-30 (SMP30) family signature 131 153 1.3E-46 T 14-10-2018 IPR005511 Senescence marker protein-30 (SMP-30) GYO_3627 46abf2ee29b7e679f13a4ce523f0c731 292 Gene3D G3DSA:2.120.10.30 2 290 3.5E-98 T 14-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like GYO_3627 46abf2ee29b7e679f13a4ce523f0c731 292 SUPERFAMILY SSF63829 8 288 4.09E-62 T 14-10-2018 GYO_3627 46abf2ee29b7e679f13a4ce523f0c731 292 Pfam PF08450 SMP-30/Gluconolaconase/LRE-like region 14 256 3.4E-82 T 14-10-2018 IPR013658 SMP-30/Gluconolactonase/LRE-like region GYO_2040 a89660401da3e1ebc6168886f21c19f2 426 SUPERFAMILY SSF63411 11 224 8.67E-29 T 14-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 GYO_2040 a89660401da3e1ebc6168886f21c19f2 426 Pfam PF05193 Peptidase M16 inactive domain 185 357 3.2E-26 T 14-10-2018 IPR007863 Peptidase M16, C-terminal GYO_2040 a89660401da3e1ebc6168886f21c19f2 426 Gene3D G3DSA:3.30.830.10 5 231 6.8E-66 T 14-10-2018 GYO_2040 a89660401da3e1ebc6168886f21c19f2 426 Gene3D G3DSA:3.30.830.10 239 425 1.1E-42 T 14-10-2018 GYO_2040 a89660401da3e1ebc6168886f21c19f2 426 SUPERFAMILY SSF63411 246 414 2.83E-31 T 14-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 GYO_1369 09f95e8332d417f56cdd48026b059564 1130 Gene3D G3DSA:3.40.50.300 1 272 4.5E-36 T 14-10-2018 GYO_1369 09f95e8332d417f56cdd48026b059564 1130 Gene3D G3DSA:3.40.50.300 871 1125 5.5E-28 T 14-10-2018 GYO_1369 09f95e8332d417f56cdd48026b059564 1130 Pfam PF13558 Putative exonuclease SbcCD, C subunit 1002 1085 8.5E-15 T 14-10-2018 GYO_1369 09f95e8332d417f56cdd48026b059564 1130 SUPERFAMILY SSF52540 944 1107 4.02E-13 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase GYO_1369 09f95e8332d417f56cdd48026b059564 1130 SUPERFAMILY SSF52540 1 284 3.51E-27 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase GYO_1369 09f95e8332d417f56cdd48026b059564 1130 Pfam PF13476 AAA domain 6 276 4.2E-14 T 14-10-2018 IPR038729 Rad50/SbcC-type AAA domain GYO_1645 9f546788979282376a2296956e3ac849 546 Gene3D G3DSA:3.40.50.300 278 523 7.6E-69 T 14-10-2018 GYO_1645 9f546788979282376a2296956e3ac849 546 SMART SM00382 34 244 9.5E-10 T 14-10-2018 IPR003593 AAA+ ATPase domain GYO_1645 9f546788979282376a2296956e3ac849 546 SMART SM00382 318 500 3.3E-13 T 14-10-2018 IPR003593 AAA+ ATPase domain GYO_1645 9f546788979282376a2296956e3ac849 546 SUPERFAMILY SSF52540 285 514 6.76E-60 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase GYO_1645 9f546788979282376a2296956e3ac849 546 ProSitePatterns PS00211 ABC transporters family signature. 149 163 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 GYO_1645 9f546788979282376a2296956e3ac849 546 ProSitePatterns PS00211 ABC transporters family signature. 423 437 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 GYO_1645 9f546788979282376a2296956e3ac849 546 Pfam PF00005 ABC transporter 26 177 8.4E-30 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 GYO_1645 9f546788979282376a2296956e3ac849 546 Gene3D G3DSA:3.40.50.300 4 273 3.1E-63 T 14-10-2018 GYO_1645 9f546788979282376a2296956e3ac849 546 Pfam PF00005 ABC transporter 310 450 5.4E-33 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 GYO_1645 9f546788979282376a2296956e3ac849 546 SUPERFAMILY SSF52540 7 241 3.25E-54 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase GYO_2453 84e2be031266937569195a553229e13d 123 Gene3D G3DSA:1.20.120.440 2 123 7.0E-45 T 14-10-2018 IPR023351 YppE-like superfamily GYO_2453 84e2be031266937569195a553229e13d 123 SUPERFAMILY SSF140415 2 121 3.4E-40 T 14-10-2018 IPR023351 YppE-like superfamily GYO_2453 84e2be031266937569195a553229e13d 123 Pfam PF08807 Bacterial domain of unknown function (DUF1798) 10 117 2.5E-35 T 14-10-2018 IPR014913 Protein of unknown function DUF1798 GYO_0536 9209c9c75c282531750a78cb7cab8206 106 TIGRFAM TIGR02378 nirD_assim_sml: nitrite reductase [NAD(P)H], small subunit 7 105 1.0E-32 T 14-10-2018 IPR012748 Nitrite reductase [NAD(P)H] small subunit, NirD GO:0008942|GO:0042128|GO:0055114 GYO_0536 9209c9c75c282531750a78cb7cab8206 106 Pfam PF00355 Rieske [2Fe-2S] domain 9 93 7.5E-15 T 14-10-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 GYO_0536 9209c9c75c282531750a78cb7cab8206 106 Gene3D G3DSA:2.102.10.10 4 106 4.8E-26 T 14-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 GYO_0536 9209c9c75c282531750a78cb7cab8206 106 SUPERFAMILY SSF50022 8 105 1.2E-30 T 14-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 GYO_1585 fb7c8f360d610ae196a3b90e4de0055b 325 SUPERFAMILY SSF69279 18 150 2.21E-13 T 14-10-2018 GYO_3800 2026cdff0e51a393df71da686c2c644e 530 TIGRFAM TIGR00815 sulP: sulfate permease 7 524 4.2E-117 T 14-10-2018 IPR001902 SLC26A/SulP transporter GO:0008271|GO:0008272|GO:0016020|GO:0055085 GYO_3800 2026cdff0e51a393df71da686c2c644e 530 Pfam PF00916 Sulfate permease family 15 379 8.1E-107 T 14-10-2018 IPR011547 SLC26A/SulP transporter domain GO:0008272|GO:0015116|GO:0016021 GYO_3800 2026cdff0e51a393df71da686c2c644e 530 SUPERFAMILY SSF52091 426 525 1.55E-18 T 14-10-2018 IPR036513 STAS domain superfamily GYO_3800 2026cdff0e51a393df71da686c2c644e 530 Gene3D G3DSA:3.30.750.24 411 529 6.3E-24 T 14-10-2018 IPR036513 STAS domain superfamily GYO_3800 2026cdff0e51a393df71da686c2c644e 530 Pfam PF01740 STAS domain 425 527 6.2E-22 T 14-10-2018 IPR002645 STAS domain GYO_1921 42780851cdaf2e6d7b83e75a0f1f418c 805 Pfam PF00271 Helicase conserved C-terminal domain 561 662 3.7E-8 T 14-10-2018 IPR001650 Helicase, C-terminal GYO_1921 42780851cdaf2e6d7b83e75a0f1f418c 805 TIGRFAM TIGR00595 priA: primosomal protein N' 292 802 2.3E-238 T 14-10-2018 IPR005259 Primosomal protein N' GO:0003677|GO:0004003|GO:0006260|GO:0032508 GYO_1921 42780851cdaf2e6d7b83e75a0f1f418c 805 Hamap MF_00983 Probable primosomal protein N' [priA]. 9 804 26.35 T 14-10-2018 IPR005259 Primosomal protein N' GO:0003677|GO:0004003|GO:0006260|GO:0032508 GYO_1921 42780851cdaf2e6d7b83e75a0f1f418c 805 Gene3D G3DSA:3.40.50.300 254 450 4.4E-78 T 14-10-2018 GYO_1921 42780851cdaf2e6d7b83e75a0f1f418c 805 Pfam PF04851 Type III restriction enzyme, res subunit 267 431 3.1E-18 T 14-10-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 GYO_1921 42780851cdaf2e6d7b83e75a0f1f418c 805 SMART SM00490 566 663 2.6E-9 T 14-10-2018 IPR001650 Helicase, C-terminal GYO_1921 42780851cdaf2e6d7b83e75a0f1f418c 805 SMART SM00487 264 455 2.5E-27 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain GYO_1921 42780851cdaf2e6d7b83e75a0f1f418c 805 SUPERFAMILY SSF52540 238 448 3.47E-43 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase GYO_1921 42780851cdaf2e6d7b83e75a0f1f418c 805 SUPERFAMILY SSF52540 532 708 8.92E-37 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase GYO_1921 42780851cdaf2e6d7b83e75a0f1f418c 805 Gene3D G3DSA:1.10.8.630 3 115 1.8E-26 T 14-10-2018 GYO_2411 ee319389ab717f300ac68a6273d8c79e 377 SMART SM00932 4 90 1.4E-28 T 14-10-2018 IPR014824 Scaffold protein Nfu/NifU, N-terminal GYO_2411 ee319389ab717f300ac68a6273d8c79e 377 SUPERFAMILY SSF48371 174 373 3.85E-36 T 14-10-2018 IPR016024 Armadillo-type fold GYO_2411 ee319389ab717f300ac68a6273d8c79e 377 SUPERFAMILY SSF110836 1 83 1.44E-22 T 14-10-2018 IPR036498 Scaffold protein Nfu/NifU, N-terminal domain superfamily GYO_2411 ee319389ab717f300ac68a6273d8c79e 377 Pfam PF13769 Virulence factor 109 188 3.6E-30 T 14-10-2018 IPR025989 Virulence factor domain GYO_2411 ee319389ab717f300ac68a6273d8c79e 377 Gene3D G3DSA:3.30.1370.70 1 92 4.4E-28 T 14-10-2018 IPR036498 Scaffold protein Nfu/NifU, N-terminal domain superfamily GYO_2411 ee319389ab717f300ac68a6273d8c79e 377 Pfam PF13646 HEAT repeats 269 344 1.1E-13 T 14-10-2018 GYO_2411 ee319389ab717f300ac68a6273d8c79e 377 Gene3D G3DSA:1.25.10.10 222 372 2.8E-30 T 14-10-2018 IPR011989 Armadillo-like helical GYO_2411 ee319389ab717f300ac68a6273d8c79e 377 Pfam PF08712 Scaffold protein Nfu/NifU N terminal 6 83 2.4E-19 T 14-10-2018 IPR014824 Scaffold protein Nfu/NifU, N-terminal GYO_2411 ee319389ab717f300ac68a6273d8c79e 377 SMART SM00567 E-Z type HEAT repeats 249 278 4.3E-4 T 14-10-2018 IPR004155 PBS lyase HEAT-like repeat Reactome: R-HSA-204626 GYO_2411 ee319389ab717f300ac68a6273d8c79e 377 SMART SM00567 E-Z type HEAT repeats 280 309 4.4E-4 T 14-10-2018 IPR004155 PBS lyase HEAT-like repeat Reactome: R-HSA-204626 GYO_2411 ee319389ab717f300ac68a6273d8c79e 377 SMART SM00567 E-Z type HEAT repeats 311 340 2.5E-4 T 14-10-2018 IPR004155 PBS lyase HEAT-like repeat Reactome: R-HSA-204626 GYO_3166 5b71ffc1ef291a54dec9614cc1d8f503 372 TIGRFAM TIGR01800 cit_synth_II: 2-methylcitrate synthase/citrate synthase II 5 371 2.3E-170 T 14-10-2018 IPR011278 2-methylcitrate synthase/citrate synthase type I GO:0005737|GO:0046912 GYO_3166 5b71ffc1ef291a54dec9614cc1d8f503 372 ProSitePatterns PS00480 Citrate synthase signature. 254 266 - T 14-10-2018 IPR019810 Citrate synthase active site GO:0006099|GO:0046912 Reactome: R-HSA-1268020|Reactome: R-HSA-71403 GYO_3166 5b71ffc1ef291a54dec9614cc1d8f503 372 Pfam PF00285 Citrate synthase, C-terminal domain 6 354 2.2E-127 T 14-10-2018 IPR002020 Citrate synthase GO:0046912 GYO_3166 5b71ffc1ef291a54dec9614cc1d8f503 372 Gene3D G3DSA:1.10.230.10 220 318 2.1E-126 T 14-10-2018 IPR016143 Citrate synthase-like, small alpha subdomain GYO_3166 5b71ffc1ef291a54dec9614cc1d8f503 372 PRINTS PR00143 Citrate synthase signature 172 187 2.4E-43 T 14-10-2018 IPR002020 Citrate synthase GO:0046912 GYO_3166 5b71ffc1ef291a54dec9614cc1d8f503 372 PRINTS PR00143 Citrate synthase signature 247 267 2.4E-43 T 14-10-2018 IPR002020 Citrate synthase GO:0046912 GYO_3166 5b71ffc1ef291a54dec9614cc1d8f503 372 PRINTS PR00143 Citrate synthase signature 304 320 2.4E-43 T 14-10-2018 IPR002020 Citrate synthase GO:0046912 GYO_3166 5b71ffc1ef291a54dec9614cc1d8f503 372 PRINTS PR00143 Citrate synthase signature 324 338 2.4E-43 T 14-10-2018 IPR002020 Citrate synthase GO:0046912 GYO_3166 5b71ffc1ef291a54dec9614cc1d8f503 372 PRINTS PR00143 Citrate synthase signature 123 136 2.4E-43 T 14-10-2018 IPR002020 Citrate synthase GO:0046912 GYO_3166 5b71ffc1ef291a54dec9614cc1d8f503 372 PRINTS PR00143 Citrate synthase signature 194 222 2.4E-43 T 14-10-2018 IPR002020 Citrate synthase GO:0046912 GYO_3166 5b71ffc1ef291a54dec9614cc1d8f503 372 PIRSF PIRSF001369 1 372 1.0E-161 T 14-10-2018 IPR024176 Citrate synthase, bacterial-type GYO_3166 5b71ffc1ef291a54dec9614cc1d8f503 372 Gene3D G3DSA:1.10.580.10 25 351 2.1E-126 T 14-10-2018 IPR016142 Citrate synthase-like, large alpha subdomain Reactome: R-HSA-1268020|Reactome: R-HSA-71403 GYO_3166 5b71ffc1ef291a54dec9614cc1d8f503 372 SUPERFAMILY SSF48256 2 371 6.8E-136 T 14-10-2018 IPR036969 Citrate synthase superfamily GO:0046912 GYO_4016 d4cd19d39089b6d9b28f31e29920d76c 116 SMART SM00938 8 109 3.7E-36 T 14-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 GYO_4016 d4cd19d39089b6d9b28f31e29920d76c 116 PRINTS PR00340 P-II protein signature 6 21 2.9E-20 T 14-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 GYO_4016 d4cd19d39089b6d9b28f31e29920d76c 116 PRINTS PR00340 P-II protein signature 27 45 2.9E-20 T 14-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 GYO_4016 d4cd19d39089b6d9b28f31e29920d76c 116 PRINTS PR00340 P-II protein signature 56 79 2.9E-20 T 14-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 GYO_4016 d4cd19d39089b6d9b28f31e29920d76c 116 PRINTS PR00340 P-II protein signature 87 107 2.9E-20 T 14-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 GYO_4016 d4cd19d39089b6d9b28f31e29920d76c 116 Gene3D G3DSA:3.30.70.120 1 116 8.7E-44 T 14-10-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal GYO_4016 d4cd19d39089b6d9b28f31e29920d76c 116 Pfam PF00543 Nitrogen regulatory protein P-II 8 109 4.3E-31 T 14-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 GYO_4016 d4cd19d39089b6d9b28f31e29920d76c 116 ProSitePatterns PS00638 P-II protein C-terminal region signature. 87 100 - T 14-10-2018 IPR017918 Nitrogen regulatory protein PII, conserved site GO:0006808|GO:0030234 GYO_4016 d4cd19d39089b6d9b28f31e29920d76c 116 SUPERFAMILY SSF54913 5 116 1.08E-32 T 14-10-2018 IPR011322 Nitrogen regulatory PII-like, alpha/beta GYO_0861 00898873eaa5feab9c1670566e0e4b76 215 Gene3D G3DSA:1.10.10.10 1 82 3.5E-32 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily GYO_0861 00898873eaa5feab9c1670566e0e4b76 215 Pfam PF06971 Putative DNA-binding protein N-terminus 7 55 1.4E-19 T 14-10-2018 IPR009718 Rex DNA-binding, C-terminal domain GO:0005737|GO:0045892|GO:0051775 GYO_0861 00898873eaa5feab9c1670566e0e4b76 215 Gene3D G3DSA:3.40.50.720 83 215 7.0E-52 T 14-10-2018 GYO_0861 00898873eaa5feab9c1670566e0e4b76 215 SUPERFAMILY SSF46785 9 80 2.9E-22 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily GYO_0861 00898873eaa5feab9c1670566e0e4b76 215 SMART SM00881 81 180 1.8E-17 T 14-10-2018 IPR003781 CoA-binding GO:0048037 GYO_0861 00898873eaa5feab9c1670566e0e4b76 215 SUPERFAMILY SSF51735 83 207 6.22E-28 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily GYO_0861 00898873eaa5feab9c1670566e0e4b76 215 Pfam PF02629 CoA binding domain 83 178 4.7E-30 T 14-10-2018 IPR003781 CoA-binding GO:0048037 GYO_0861 00898873eaa5feab9c1670566e0e4b76 215 Hamap MF_01131 Redox-sensing transcriptional repressor Rex [rex]. 3 209 38.204 T 14-10-2018 IPR022876 Redox-sensing transcriptional repressor Rex GO:0005737|GO:0045892|GO:0051775 GYO_3038 b4d43f105c36488ae1b7d3ae7a25bf92 288 Pfam PF02163 Peptidase family M50 111 169 1.3E-7 T 14-10-2018 IPR008915 Peptidase M50 GO:0004222|GO:0006508 Reactome: R-HSA-1655829|Reactome: R-HSA-381033|Reactome: R-HSA-8874211|Reactome: R-HSA-8963889 GYO_3038 b4d43f105c36488ae1b7d3ae7a25bf92 288 Pfam PF02163 Peptidase family M50 33 104 1.6E-6 T 14-10-2018 IPR008915 Peptidase M50 GO:0004222|GO:0006508 Reactome: R-HSA-1655829|Reactome: R-HSA-381033|Reactome: R-HSA-8874211|Reactome: R-HSA-8963889 GYO_2553 5fc62a8248f81a3d6a9a9a368d9d3ebc 179 Pfam PF13047 Protein of unknown function (DUF3907) 28 171 2.8E-59 T 14-10-2018 IPR025013 Protein of unknown function DUF3907 GYO_0471 26677239e00d971dac470b12f2327fac 212 Gene3D G3DSA:3.40.50.1820 32 212 4.1E-54 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold GYO_0471 26677239e00d971dac470b12f2327fac 212 SUPERFAMILY SSF53474 33 202 2.89E-23 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold GYO_0471 26677239e00d971dac470b12f2327fac 212 Pfam PF01674 Lipase (class 2) 35 129 2.9E-13 T 14-10-2018 IPR002918 Lipase EstA/Esterase EstB GO:0016787 KEGG: 00561+3.1.1.3|MetaCyc: PWY-6857 GYO_1648 6f0adb8e8b64eb9fccba2169a28b098d 228 Pfam PF00486 Transcriptional regulatory protein, C terminal 152 225 1.3E-27 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 GYO_1648 6f0adb8e8b64eb9fccba2169a28b098d 228 SMART SM00448 4 115 9.3E-44 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 GYO_1648 6f0adb8e8b64eb9fccba2169a28b098d 228 SUPERFAMILY SSF52172 3 181 7.39E-41 T 14-10-2018 IPR011006 CheY-like superfamily GYO_1648 6f0adb8e8b64eb9fccba2169a28b098d 228 Gene3D G3DSA:1.10.10.10 127 228 9.0E-35 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily GYO_1648 6f0adb8e8b64eb9fccba2169a28b098d 228 SMART SM00862 151 226 1.8E-28 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 GYO_1648 6f0adb8e8b64eb9fccba2169a28b098d 228 Gene3D G3DSA:3.40.50.2300 1 125 3.1E-38 T 14-10-2018 GYO_1648 6f0adb8e8b64eb9fccba2169a28b098d 228 Pfam PF00072 Response regulator receiver domain 6 116 1.5E-29 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 GYO_4553 ace4c4d3038bcaf032687ce60aceedf1 580 Gene3D G3DSA:2.30.40.10 27 360 4.2E-80 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 GYO_4553 ace4c4d3038bcaf032687ce60aceedf1 580 Pfam PF01979 Amidohydrolase family 78 361 2.6E-25 T 14-10-2018 IPR006680 Amidohydrolase-related GO:0016787 GYO_4553 ace4c4d3038bcaf032687ce60aceedf1 580 Gene3D G3DSA:3.20.20.140 82 325 4.2E-80 T 14-10-2018 GYO_4553 ace4c4d3038bcaf032687ce60aceedf1 580 SUPERFAMILY SSF51556 82 328 2.27E-9 T 14-10-2018 IPR032466 Metal-dependent hydrolase GYO_4553 ace4c4d3038bcaf032687ce60aceedf1 580 SUPERFAMILY SSF51338 27 117 4.59E-12 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 GYO_4553 ace4c4d3038bcaf032687ce60aceedf1 580 Pfam PF13382 Adenine deaminase C-terminal domain 418 571 3.0E-36 T 14-10-2018 IPR026912 Adenine deaminase C-terminal domain KEGG: 00230+3.5.4.2|MetaCyc: PWY-6610 GYO_3233 8fc340d5607d78ec1d37cf653e5827e7 148 Gene3D G3DSA:3.40.50.450 4 147 4.0E-6 T 14-10-2018 GYO_3233 8fc340d5607d78ec1d37cf653e5827e7 148 Pfam PF11071 Nucleoside 2-deoxyribosyltransferase YtoQ 6 145 4.3E-65 T 14-10-2018 IPR019884 YtoQ family protein GYO_3233 8fc340d5607d78ec1d37cf653e5827e7 148 TIGRFAM TIGR03646 YtoQ_fam: YtoQ family protein 3 146 1.4E-70 T 14-10-2018 IPR019884 YtoQ family protein GYO_1535 a9b1af142539bf3c1b37749f0b3ce08c 165 PIRSF PIRSF019307 1 165 5.4E-67 T 14-10-2018 IPR014500 Uncharacterised conserved protein UCP019307, cupin-type GYO_1535 a9b1af142539bf3c1b37749f0b3ce08c 165 Gene3D G3DSA:2.60.120.10 31 129 6.1E-12 T 14-10-2018 IPR014710 RmlC-like jelly roll fold GYO_1535 a9b1af142539bf3c1b37749f0b3ce08c 165 Pfam PF07883 Cupin domain 52 104 7.1E-8 T 14-10-2018 IPR013096 Cupin 2, conserved barrel GYO_1535 a9b1af142539bf3c1b37749f0b3ce08c 165 SUPERFAMILY SSF51182 15 130 8.47E-18 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily GYO_1535 a9b1af142539bf3c1b37749f0b3ce08c 165 SMART SM00835 28 135 0.001 T 14-10-2018 IPR006045 Cupin 1 GO:0045735 GYO_3081 1f55d1b738d19846d60f8a54a49b8fb9 169 SUPERFAMILY SSF56300 1 159 4.56E-42 T 14-10-2018 GYO_3081 1f55d1b738d19846d60f8a54a49b8fb9 169 Gene3D G3DSA:3.60.21.10 1 168 1.6E-45 T 14-10-2018 IPR029052 Metallo-dependent phosphatase-like GYO_3081 1f55d1b738d19846d60f8a54a49b8fb9 169 TIGRFAM TIGR00040 yfcE: phosphodiesterase, MJ0936 family 1 149 2.8E-41 T 14-10-2018 IPR000979 Phosphodiesterase MJ0936/Vps29 Reactome: R-HSA-3238698 GYO_3081 1f55d1b738d19846d60f8a54a49b8fb9 169 Pfam PF12850 Calcineurin-like phosphoesterase superfamily domain 1 146 9.1E-31 T 14-10-2018 IPR024654 Calcineurin-like phosphoesterase domain, lpxH type Reactome: R-HSA-3238698 GYO_1488 b4c8235f51843f2b488893191647421e 84 Pfam PF14069 Stage VI sporulation protein F 6 76 3.6E-27 T 14-10-2018 IPR025942 Stage VI sporulation protein F GYO_3889 c2ae05e537f8ff290ae675f918f8e342 240 SUPERFAMILY SSF53271 81 239 7.4E-19 T 14-10-2018 IPR029057 Phosphoribosyltransferase-like GYO_3889 c2ae05e537f8ff290ae675f918f8e342 240 Gene3D G3DSA:3.40.50.2020 108 240 8.7E-18 T 14-10-2018 GYO_3889 c2ae05e537f8ff290ae675f918f8e342 240 TIGRFAM TIGR00201 comF: comF family protein 55 239 1.3E-70 T 14-10-2018 IPR005222 Competence protein ComF GYO_4315 d6ec5bf00136fb6317713d0f521898cb 610 SUPERFAMILY SSF51261 461 607 5.93E-51 T 14-10-2018 IPR011055 Duplicated hybrid motif GYO_4315 d6ec5bf00136fb6317713d0f521898cb 610 Gene3D G3DSA:3.30.1360.60 2 77 3.1E-28 T 14-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 GYO_4315 d6ec5bf00136fb6317713d0f521898cb 610 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 19 36 - T 14-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 GYO_4315 d6ec5bf00136fb6317713d0f521898cb 610 Gene3D G3DSA:2.70.70.10 458 609 1.2E-52 T 14-10-2018 IPR011055 Duplicated hybrid motif GYO_4315 d6ec5bf00136fb6317713d0f521898cb 610 Pfam PF02378 Phosphotransferase system, EIIC 106 384 3.7E-31 T 14-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 GYO_4315 d6ec5bf00136fb6317713d0f521898cb 610 TIGRFAM TIGR00830 PTBA: PTS system, glucose subfamily, IIA component 465 585 7.4E-42 T 14-10-2018 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 GYO_4315 d6ec5bf00136fb6317713d0f521898cb 610 Pfam PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 464 588 2.7E-47 T 14-10-2018 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 GYO_4315 d6ec5bf00136fb6317713d0f521898cb 610 TIGRFAM TIGR01995 PTS-II-ABC-beta: PTS system, beta-glucoside-specific IIABC component 4 608 5.1E-236 T 14-10-2018 IPR011297 Phosphotransferase system, beta-glucoside-specific IIABC component GO:0005886|GO:0008982|GO:0009401 GYO_4315 d6ec5bf00136fb6317713d0f521898cb 610 SUPERFAMILY SSF55604 7 80 5.62E-22 T 14-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 GYO_4315 d6ec5bf00136fb6317713d0f521898cb 610 Pfam PF00367 phosphotransferase system, EIIB 8 41 1.8E-15 T 14-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 GYO_4387 288138b90dd39ac216b74d55bc23db16 101 Pfam PF10850 Protein of unknown function (DUF2653) 2 88 4.2E-30 T 14-10-2018 IPR020516 Uncharacterised protein family YxcD GYO_4387 288138b90dd39ac216b74d55bc23db16 101 ProDom PD068665 YXCD 3 93 9.0E-45 T 14-10-2018 IPR020516 Uncharacterised protein family YxcD GYO_0396 e73c0889861e24c9e538ff39a615e9ec 82 Pfam PF17334 Sigma-G-dependent sporulation-specific SASP protein 1 82 1.1E-35 T 14-10-2018 IPR020255 Sigma-G-dependent sporulation-specific SASP protein GYO_0396 e73c0889861e24c9e538ff39a615e9ec 82 ProDom PD059965 SASP SPORULATION-SPECIFIC SIGMA-G-DEPENDENT SPORULATION SPECIFIC CSGA 1 81 2.0E-39 T 14-10-2018 IPR020255 Sigma-G-dependent sporulation-specific SASP protein GYO_1969 14d4d808592954532863f2981b68f893 181 TIGRFAM TIGR03692 ATP_dep_HslV: ATP-dependent protease HslVU, peptidase subunit 7 180 4.6E-82 T 14-10-2018 IPR022281 ATP-dependent protease, HslV subunit GO:0004298|GO:0006508|GO:0009376 GYO_1969 14d4d808592954532863f2981b68f893 181 Pfam PF00227 Proteasome subunit 5 177 1.6E-26 T 14-10-2018 IPR001353 Proteasome, subunit alpha/beta GO:0004298|GO:0005839|GO:0051603 Reactome: R-HSA-1169091|Reactome: R-HSA-1234176|Reactome: R-HSA-1236974|Reactome: R-HSA-1236978|Reactome: R-HSA-174084|Reactome: R-HSA-174113|Reactome: R-HSA-174154|Reactome: R-HSA-174178|Reactome: R-HSA-174184|Reactome: R-HSA-180534|Reactome: R-HSA-180585|Reactome: R-HSA-187577|Reactome: R-HSA-195253|Reactome: R-HSA-202424|Reactome: R-HSA-211733|Reactome: R-HSA-2467813|Reactome: R-HSA-2871837|Reactome: R-HSA-349425|Reactome: R-HSA-350562|Reactome: R-HSA-382556|Reactome: R-HSA-450408|Reactome: R-HSA-4608870|Reactome: R-HSA-4641257|Reactome: R-HSA-4641258|Reactome: R-HSA-5358346|Reactome: R-HSA-5362768|Reactome: R-HSA-5607761|Reactome: R-HSA-5607764|Reactome: R-HSA-5610780|Reactome: R-HSA-5610783|Reactome: R-HSA-5610785|Reactome: R-HSA-5632684|Reactome: R-HSA-5658442|Reactome: R-HSA-5668541|Reactome: R-HSA-5676590|Reactome: R-HSA-5678895|Reactome: R-HSA-5687128|Reactome: R-HSA-5689603|Reactome: R-HSA-5689880|Reactome: R-HSA-68827|Reactome: R-HSA-68949|Reactome: R-HSA-69017|Reactome: R-HSA-69229|Reactome: R-HSA-69481|Reactome: R-HSA-69601|Reactome: R-HSA-8852276|Reactome: R-HSA-8854050|Reactome: R-HSA-8939236|Reactome: R-HSA-8939902|Reactome: R-HSA-8941858|Reactome: R-HSA-8948751|Reactome: R-HSA-8951664|Reactome: R-HSA-9010553|Reactome: R-HSA-9020702|Reactome: R-HSA-9604323|Reactome: R-HSA-983168 GYO_1969 14d4d808592954532863f2981b68f893 181 SUPERFAMILY SSF56235 4 180 1.3E-59 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal GYO_1969 14d4d808592954532863f2981b68f893 181 Hamap MF_00248 ATP-dependent protease subunit HslV [hslV]. 6 180 40.985 T 14-10-2018 IPR022281 ATP-dependent protease, HslV subunit GO:0004298|GO:0006508|GO:0009376 GYO_1969 14d4d808592954532863f2981b68f893 181 PIRSF PIRSF039093 1 181 4.2E-84 T 14-10-2018 IPR022281 ATP-dependent protease, HslV subunit GO:0004298|GO:0006508|GO:0009376 GYO_1969 14d4d808592954532863f2981b68f893 181 Gene3D G3DSA:3.60.20.10 2 181 4.0E-68 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal GYO_0786 ab4503c4f8f5363e7181d6bd8cf0fc8f 297 SUPERFAMILY SSF160240 216 294 7.85E-18 T 14-10-2018 IPR036837 Cation efflux protein, cytoplasmic domain superfamily Reactome: R-HSA-435368 GYO_0786 ab4503c4f8f5363e7181d6bd8cf0fc8f 297 Gene3D G3DSA:3.30.70.1350 213 295 1.2E-18 T 14-10-2018 IPR036837 Cation efflux protein, cytoplasmic domain superfamily Reactome: R-HSA-435368 GYO_0786 ab4503c4f8f5363e7181d6bd8cf0fc8f 297 Gene3D G3DSA:1.20.1510.10 8 212 6.0E-53 T 14-10-2018 IPR027469 Cation efflux transmembrane domain superfamily GYO_0786 ab4503c4f8f5363e7181d6bd8cf0fc8f 297 Pfam PF16916 Dimerisation domain of Zinc Transporter 218 294 7.9E-21 T 14-10-2018 IPR027470 Cation efflux protein, cytoplasmic domain GYO_0786 ab4503c4f8f5363e7181d6bd8cf0fc8f 297 SUPERFAMILY SSF161111 7 213 2.35E-49 T 14-10-2018 IPR027469 Cation efflux transmembrane domain superfamily GYO_0786 ab4503c4f8f5363e7181d6bd8cf0fc8f 297 Pfam PF01545 Cation efflux family 14 212 1.7E-46 T 14-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 GYO_0786 ab4503c4f8f5363e7181d6bd8cf0fc8f 297 TIGRFAM TIGR01297 CDF: cation diffusion facilitator family transporter 10 294 1.2E-85 T 14-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 GYO_2467 040bac7ccdbb7e9787c119fb7bacff60 127 PIRSF PIRSF006246 1 126 2.1E-55 T 14-10-2018 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155 GYO_2467 040bac7ccdbb7e9787c119fb7bacff60 127 ProDom PD009294 ASPARTATE 1-DECARBOXYLASE DECARBOXYLASE CHAIN LYASE ALPHA ALPHA- CONTAINS: PRECURSOR BETA 5 98 4.0E-49 T 14-10-2018 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155 GYO_2467 040bac7ccdbb7e9787c119fb7bacff60 127 Gene3D G3DSA:2.40.40.20 1 125 6.8E-55 T 14-10-2018 GYO_2467 040bac7ccdbb7e9787c119fb7bacff60 127 SUPERFAMILY SSF50692 1 117 5.03E-51 T 14-10-2018 IPR009010 Aspartate decarboxylase-like domain superfamily GYO_2467 040bac7ccdbb7e9787c119fb7bacff60 127 Hamap MF_00446 Aspartate 1-decarboxylase [panD]. 1 127 74.313 T 14-10-2018 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155 GYO_2467 040bac7ccdbb7e9787c119fb7bacff60 127 Pfam PF02261 Aspartate decarboxylase 1 114 3.7E-54 T 14-10-2018 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155 GYO_2467 040bac7ccdbb7e9787c119fb7bacff60 127 TIGRFAM TIGR00223 panD: aspartate 1-decarboxylase 1 126 1.4E-69 T 14-10-2018 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155 GYO_1094 7504f9ea27f9da62fdf475e60aa4e3f3 482 Pfam PF00083 Sugar (and other) transporter 25 462 1.2E-112 T 14-10-2018 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 GYO_1094 7504f9ea27f9da62fdf475e60aa4e3f3 482 ProSitePatterns PS00217 Sugar transport proteins signature 2. 122 147 - T 14-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 GYO_1094 7504f9ea27f9da62fdf475e60aa4e3f3 482 PRINTS PR00171 Sugar transporter signature 117 136 7.2E-22 T 14-10-2018 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022857|GO:0055085 Reactome: R-HSA-189200 GYO_1094 7504f9ea27f9da62fdf475e60aa4e3f3 482 PRINTS PR00171 Sugar transporter signature 364 385 7.2E-22 T 14-10-2018 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022857|GO:0055085 Reactome: R-HSA-189200 GYO_1094 7504f9ea27f9da62fdf475e60aa4e3f3 482 PRINTS PR00171 Sugar transporter signature 32 42 7.2E-22 T 14-10-2018 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022857|GO:0055085 Reactome: R-HSA-189200 GYO_1094 7504f9ea27f9da62fdf475e60aa4e3f3 482 PRINTS PR00171 Sugar transporter signature 387 399 7.2E-22 T 14-10-2018 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022857|GO:0055085 Reactome: R-HSA-189200 GYO_1094 7504f9ea27f9da62fdf475e60aa4e3f3 482 PRINTS PR00171 Sugar transporter signature 275 285 7.2E-22 T 14-10-2018 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022857|GO:0055085 Reactome: R-HSA-189200 GYO_1094 7504f9ea27f9da62fdf475e60aa4e3f3 482 SUPERFAMILY SSF103473 17 460 3.79E-78 T 14-10-2018 IPR036259 MFS transporter superfamily GYO_1094 7504f9ea27f9da62fdf475e60aa4e3f3 482 Gene3D G3DSA:1.20.1250.20 17 466 8.0E-129 T 14-10-2018 GYO_1094 7504f9ea27f9da62fdf475e60aa4e3f3 482 TIGRFAM TIGR00879 SP: MFS transporter, sugar porter (SP) family 10 458 3.5E-115 T 14-10-2018 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022857|GO:0055085 Reactome: R-HSA-189200 GYO_3781 5bbe7d26d2df7597268186fe01651859 516 SUPERFAMILY SSF49899 356 513 1.11E-26 T 14-10-2018 IPR013320 Concanavalin A-like lectin/glucanase domain superfamily GYO_3781 5bbe7d26d2df7597268186fe01651859 516 Pfam PF08244 Glycosyl hydrolases family 32 C terminal 367 509 7.2E-27 T 14-10-2018 IPR013189 Glycosyl hydrolase family 32, C-terminal GYO_3781 5bbe7d26d2df7597268186fe01651859 516 SMART SM00640 48 475 3.3E-123 T 14-10-2018 IPR001362 Glycoside hydrolase, family 32 GO:0004553|GO:0005975 GYO_3781 5bbe7d26d2df7597268186fe01651859 516 Gene3D G3DSA:2.115.10.20 45 358 4.7E-100 T 14-10-2018 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily GYO_3781 5bbe7d26d2df7597268186fe01651859 516 Pfam PF00251 Glycosyl hydrolases family 32 N-terminal domain 48 356 3.9E-84 T 14-10-2018 IPR013148 Glycosyl hydrolase family 32, N-terminal GYO_3781 5bbe7d26d2df7597268186fe01651859 516 SUPERFAMILY SSF75005 40 356 1.6E-85 T 14-10-2018 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily GYO_3781 5bbe7d26d2df7597268186fe01651859 516 Gene3D G3DSA:2.60.120.560 361 516 1.2E-38 T 14-10-2018 GYO_2212 8d017fdea7712481dd9d0c95088fd236 587 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 69 94 1.2E-77 T 14-10-2018 GYO_2212 8d017fdea7712481dd9d0c95088fd236 587 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 259 275 1.2E-77 T 14-10-2018 GYO_2212 8d017fdea7712481dd9d0c95088fd236 587 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 458 473 1.2E-77 T 14-10-2018 GYO_2212 8d017fdea7712481dd9d0c95088fd236 587 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 427 445 1.2E-77 T 14-10-2018 GYO_2212 8d017fdea7712481dd9d0c95088fd236 587 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 289 308 1.2E-77 T 14-10-2018 GYO_2212 8d017fdea7712481dd9d0c95088fd236 587 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 144 162 1.2E-77 T 14-10-2018 GYO_2212 8d017fdea7712481dd9d0c95088fd236 587 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 403 421 1.2E-77 T 14-10-2018 GYO_2212 8d017fdea7712481dd9d0c95088fd236 587 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 482 499 1.2E-77 T 14-10-2018 GYO_2212 8d017fdea7712481dd9d0c95088fd236 587 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 162 181 1.2E-77 T 14-10-2018 GYO_2212 8d017fdea7712481dd9d0c95088fd236 587 TIGRFAM TIGR00066 g_glut_trans: gamma-glutamyltransferase 47 575 5.0E-229 T 14-10-2018 IPR000101 Gamma-glutamyltranspeptidase GO:0006751|GO:0036374 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-4061|MetaCyc: PWY-5826|MetaCyc: PWY-6842|MetaCyc: PWY-7112|MetaCyc: PWY-7559 GYO_2212 8d017fdea7712481dd9d0c95088fd236 587 Pfam PF01019 Gamma-glutamyltranspeptidase 62 577 1.8E-178 T 14-10-2018 GYO_2212 8d017fdea7712481dd9d0c95088fd236 587 Gene3D G3DSA:3.60.20.40 403 581 5.7E-74 T 14-10-2018 GYO_2212 8d017fdea7712481dd9d0c95088fd236 587 Gene3D G3DSA:1.10.246.130 275 402 1.2E-53 T 14-10-2018 GYO_2212 8d017fdea7712481dd9d0c95088fd236 587 SUPERFAMILY SSF56235 39 582 3.67E-179 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal GYO_2212 8d017fdea7712481dd9d0c95088fd236 587 ProSitePatterns PS00462 Gamma-glutamyltranspeptidase signature. 403 427 - T 14-10-2018 IPR000101 Gamma-glutamyltranspeptidase GO:0006751|GO:0036374 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-4061|MetaCyc: PWY-5826|MetaCyc: PWY-6842|MetaCyc: PWY-7112|MetaCyc: PWY-7559 GYO_3839 f142924806f9c75b181f123053d70d77 242 Hamap MF_01241 Glucosamine-6-phosphate deaminase [nagB]. 1 241 44.623 T 14-10-2018 IPR004547 Glucosamine-6-phosphate isomerase GO:0004342|GO:0006044 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906|Reactome: R-HSA-70171 GYO_3839 f142924806f9c75b181f123053d70d77 242 TIGRFAM TIGR00502 nagB: glucosamine-6-phosphate deaminase 1 240 9.0E-117 T 14-10-2018 IPR004547 Glucosamine-6-phosphate isomerase GO:0004342|GO:0006044 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906|Reactome: R-HSA-70171 GYO_3839 f142924806f9c75b181f123053d70d77 242 Gene3D G3DSA:3.40.50.1360 1 242 2.5E-110 T 14-10-2018 GYO_3839 f142924806f9c75b181f123053d70d77 242 Pfam PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase 9 227 1.5E-22 T 14-10-2018 IPR006148 Glucosamine/galactosamine-6-phosphate isomerase GO:0005975 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906 GYO_3839 f142924806f9c75b181f123053d70d77 242 SUPERFAMILY SSF100950 1 238 1.55E-94 T 14-10-2018 IPR037171 NagB/RpiA transferase-like GYO_3839 f142924806f9c75b181f123053d70d77 242 ProSitePatterns PS01161 Glucosamine/galactosamine-6-phosphate isomerases signature. 120 138 - T 14-10-2018 IPR018321 Glucosamine-6-phosphate isomerase, conserved site GO:0004342|GO:0006044 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906|Reactome: R-HSA-70171 GYO_2017 f021f36a96c8790d857d0cae7395204f 97 Pfam PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family 5 92 3.9E-20 T 14-10-2018 IPR004038 Ribosomal protein L7Ae/L30e/S12e/Gadd45 GYO_2017 f021f36a96c8790d857d0cae7395204f 97 Gene3D G3DSA:3.30.1330.30 1 97 4.4E-41 T 14-10-2018 IPR029064 50S ribosomal protein L30e-like GYO_2017 f021f36a96c8790d857d0cae7395204f 97 ProSitePatterns PS01082 Ribosomal protein L7Ae signature. 53 70 - T 14-10-2018 IPR004037 Ribosomal protein L7Ae conserved site GO:0042254|GO:1990904 Reactome: R-HSA-6791226 GYO_2017 f021f36a96c8790d857d0cae7395204f 97 SUPERFAMILY SSF55315 3 96 1.45E-25 T 14-10-2018 IPR029064 50S ribosomal protein L30e-like GYO_1401 1032b635a5b9c4165f7b3730c6866476 252 SUPERFAMILY SSF102110 6 250 5.89E-84 T 14-10-2018 IPR036112 (2R)-phospho-3-sulpholactate synthase, ComA superfamily KEGG: 00680+4.4.1.19 GYO_1401 1032b635a5b9c4165f7b3730c6866476 252 Gene3D G3DSA:3.20.20.70 3 252 1.7E-99 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 GYO_1401 1032b635a5b9c4165f7b3730c6866476 252 Pfam PF02679 (2R)-phospho-3-sulfolactate synthase (ComA) 11 248 6.1E-80 T 14-10-2018 IPR003830 (2R)-phospho-3-sulpholactate synthase, ComA KEGG: 00680+4.4.1.19 GYO_2154 c60e6f2495e319b65242d2c458508354 217 Pfam PF00239 Resolvase, N terminal domain 3 147 6.8E-27 T 14-10-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 GYO_2154 c60e6f2495e319b65242d2c458508354 217 SMART SM00857 3 149 4.1E-35 T 14-10-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 GYO_2154 c60e6f2495e319b65242d2c458508354 217 SUPERFAMILY SSF53041 1 148 2.09E-27 T 14-10-2018 IPR036162 Resolvase-like, N-terminal catalytic domain superfamily GO:0000150|GO:0003677|GO:0006310 GYO_2154 c60e6f2495e319b65242d2c458508354 217 Gene3D G3DSA:3.40.50.1390 1 158 1.6E-28 T 14-10-2018 GYO_3060 06f7fa27da3ffb80b1feb8cf46a4aee0 276 Pfam PF01578 Cytochrome C assembly protein 67 271 5.3E-40 T 14-10-2018 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 GYO_3667 80c1aa3af37471ad2b3779a4419b0b55 211 Hamap MF_01216 FMN-dependent NADH-azoreductase [azoR]. 2 211 27.885 T 14-10-2018 IPR023048 NADH-azoreductase, FMN-dependent GO:0016661|GO:0055114 GYO_3667 80c1aa3af37471ad2b3779a4419b0b55 211 Gene3D G3DSA:3.40.50.360 1 211 2.0E-61 T 14-10-2018 IPR029039 Flavoprotein-like superfamily GYO_3667 80c1aa3af37471ad2b3779a4419b0b55 211 Pfam PF02525 Flavodoxin-like fold 3 206 2.8E-44 T 14-10-2018 IPR003680 Flavodoxin-like fold GYO_3667 80c1aa3af37471ad2b3779a4419b0b55 211 SUPERFAMILY SSF52218 1 210 4.19E-51 T 14-10-2018 IPR029039 Flavoprotein-like superfamily GYO_3877 79f5fce63ddfa4cc5bcfe4db0f478f9d 133 SUPERFAMILY SSF101116 4 123 3.27E-39 T 14-10-2018 IPR036584 Flagellar protein FliS superfamily GO:0044780 GYO_3877 79f5fce63ddfa4cc5bcfe4db0f478f9d 133 Pfam PF02561 Flagellar protein FliS 7 118 9.8E-40 T 14-10-2018 IPR003713 Flagellar protein FliS GO:0044780 GYO_3877 79f5fce63ddfa4cc5bcfe4db0f478f9d 133 Gene3D G3DSA:1.20.120.340 1 123 2.0E-40 T 14-10-2018 GYO_3877 79f5fce63ddfa4cc5bcfe4db0f478f9d 133 PIRSF PIRSF039090 1 129 4.3E-37 T 14-10-2018 IPR003713 Flagellar protein FliS GO:0044780 GYO_3877 79f5fce63ddfa4cc5bcfe4db0f478f9d 133 TIGRFAM TIGR00208 fliS: flagellar protein FliS 1 122 4.4E-60 T 14-10-2018 IPR003713 Flagellar protein FliS GO:0044780 GYO_2704 a48287026b63d777d86b9a2740099886 70 Pfam PF10942 Protein of unknown function (DUF2619) 1 64 3.9E-24 T 14-10-2018 IPR020390 Uncharacterised protein family YqhV GYO_2704 a48287026b63d777d86b9a2740099886 70 ProDom PD064940 YQHV TRANSMEMBRANE MEMBRANE BH2798 1 68 1.0E-29 T 14-10-2018 IPR020390 Uncharacterised protein family YqhV GYO_2598 16d1f2edd946ce8242f0c228983b2447 40 Pfam PF13072 Protein of unknown function (DUF3936) 2 37 4.6E-22 T 14-10-2018 IPR025177 Cell division inhibitor MciZ GYO_1460 3227fe7b67eceef5db1d76119bf4b03a 299 Gene3D G3DSA:1.10.472.60 61 185 3.0E-33 T 14-10-2018 GYO_1460 3227fe7b67eceef5db1d76119bf4b03a 299 SUPERFAMILY SSF52833 19 223 1.24E-29 T 14-10-2018 IPR036249 Thioredoxin-like superfamily GYO_1460 3227fe7b67eceef5db1d76119bf4b03a 299 Pfam PF13743 Thioredoxin 24 215 1.4E-73 T 14-10-2018 GYO_1460 3227fe7b67eceef5db1d76119bf4b03a 299 Gene3D G3DSA:3.40.30.10 26 212 3.0E-33 T 14-10-2018 GYO_2654 2fc0838087c20bf55652b6f358c15604 299 Gene3D G3DSA:3.40.718.10 3 295 1.5E-102 T 14-10-2018 GYO_2654 2fc0838087c20bf55652b6f358c15604 299 TIGRFAM TIGR02706 P_butyryltrans: phosphate butyryltransferase 3 294 6.9E-140 T 14-10-2018 IPR014079 Phosphate butyryltransferase GO:0016740|GO:0019605|GO:0050182 KEGG: 00650+2.3.1.19 GYO_2654 2fc0838087c20bf55652b6f358c15604 299 SUPERFAMILY SSF53659 5 294 9.05E-61 T 14-10-2018 GYO_2654 2fc0838087c20bf55652b6f358c15604 299 PIRSF PIRSF000428 1 297 3.4E-82 T 14-10-2018 IPR012147 Phosphate acetyl/butyryltransferase GO:0016746 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 GYO_2654 2fc0838087c20bf55652b6f358c15604 299 Pfam PF01515 Phosphate acetyl/butaryl transferase 60 291 2.0E-48 T 14-10-2018 IPR002505 Phosphate acetyl/butaryl transferase GO:0016746 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 GYO_0904 ae1735ea822bff0eb487c192e4a7b538 431 Pfam PF00206 Lyase 7 286 4.3E-84 T 14-10-2018 IPR022761 Fumarate lyase, N-terminal GYO_0904 ae1735ea822bff0eb487c192e4a7b538 431 Pfam PF10397 Adenylosuccinate lyase C-terminus 350 427 4.0E-25 T 14-10-2018 IPR019468 Adenylosuccinate lyase C-terminal KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234|Reactome: R-HSA-73817 GYO_0904 ae1735ea822bff0eb487c192e4a7b538 431 PRINTS PR00149 Fumarate lyase superfamily signature 261 277 9.9E-27 T 14-10-2018 IPR000362 Fumarate lyase family GYO_0904 ae1735ea822bff0eb487c192e4a7b538 431 PRINTS PR00149 Fumarate lyase superfamily signature 216 243 9.9E-27 T 14-10-2018 IPR000362 Fumarate lyase family GYO_0904 ae1735ea822bff0eb487c192e4a7b538 431 PRINTS PR00149 Fumarate lyase superfamily signature 88 106 9.9E-27 T 14-10-2018 IPR000362 Fumarate lyase family GYO_0904 ae1735ea822bff0eb487c192e4a7b538 431 PRINTS PR00149 Fumarate lyase superfamily signature 133 151 9.9E-27 T 14-10-2018 IPR000362 Fumarate lyase family GYO_0904 ae1735ea822bff0eb487c192e4a7b538 431 PRINTS PR00145 Argininosuccinate lyase family signature 87 109 2.6E-10 T 14-10-2018 GYO_0904 ae1735ea822bff0eb487c192e4a7b538 431 PRINTS PR00145 Argininosuccinate lyase family signature 216 240 2.6E-10 T 14-10-2018 GYO_0904 ae1735ea822bff0eb487c192e4a7b538 431 PRINTS PR00145 Argininosuccinate lyase family signature 128 148 2.6E-10 T 14-10-2018 GYO_0904 ae1735ea822bff0eb487c192e4a7b538 431 PRINTS PR00145 Argininosuccinate lyase family signature 261 277 2.6E-10 T 14-10-2018 GYO_0904 ae1735ea822bff0eb487c192e4a7b538 431 SUPERFAMILY SSF48557 3 427 3.77E-142 T 14-10-2018 IPR008948 L-Aspartase-like GO:0003824 GYO_0904 ae1735ea822bff0eb487c192e4a7b538 431 ProSitePatterns PS00163 Fumarate lyases signature. 261 270 - T 14-10-2018 IPR020557 Fumarate lyase, conserved site GO:0003824 GYO_0904 ae1735ea822bff0eb487c192e4a7b538 431 SMART SM00998 349 429 5.0E-40 T 14-10-2018 IPR019468 Adenylosuccinate lyase C-terminal KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234|Reactome: R-HSA-73817 GYO_0904 ae1735ea822bff0eb487c192e4a7b538 431 Gene3D G3DSA:1.20.200.10 93 348 5.8E-104 T 14-10-2018 GYO_0904 ae1735ea822bff0eb487c192e4a7b538 431 TIGRFAM TIGR00928 purB: adenylosuccinate lyase 1 428 2.2E-188 T 14-10-2018 IPR004769 Adenylosuccinate lyase GO:0004018|GO:0009152 KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234|Reactome: R-HSA-73817 GYO_0904 ae1735ea822bff0eb487c192e4a7b538 431 Gene3D G3DSA:1.10.275.10 1 92 2.4E-39 T 14-10-2018 IPR024083 Fumarase/histidase, N-terminal GYO_0904 ae1735ea822bff0eb487c192e4a7b538 431 Gene3D G3DSA:1.10.40.30 349 431 2.2E-34 T 14-10-2018 GYO_3311 e9335decc70008ff3b07935521699a47 334 Gene3D G3DSA:3.40.190.10 143 332 6.0E-32 T 14-10-2018 GYO_3311 e9335decc70008ff3b07935521699a47 334 SUPERFAMILY SSF53850 33 257 2.38E-33 T 14-10-2018 GYO_3311 e9335decc70008ff3b07935521699a47 334 Gene3D G3DSA:3.40.190.10 25 127 2.5E-16 T 14-10-2018 GYO_3311 e9335decc70008ff3b07935521699a47 334 Pfam PF13379 NMT1-like family 42 258 1.5E-23 T 14-10-2018 GYO_1683 115ac695f2c981230b5bad4ae2560bb6 397 PIRSF PIRSF031134 4 396 6.3E-164 T 14-10-2018 IPR009212 Methylthioribose kinase GO:0009086|GO:0046522 KEGG: 00270+2.7.1.100|MetaCyc: PWY-6754 GYO_1683 115ac695f2c981230b5bad4ae2560bb6 397 Pfam PF01636 Phosphotransferase enzyme family 35 269 2.0E-13 T 14-10-2018 IPR002575 Aminoglycoside phosphotransferase GYO_1683 115ac695f2c981230b5bad4ae2560bb6 397 Gene3D G3DSA:3.90.1200.10 120 397 8.9E-116 T 14-10-2018 GYO_1683 115ac695f2c981230b5bad4ae2560bb6 397 Hamap MF_01683 Methylthioribose kinase [mtnK]. 1 397 199.337 T 14-10-2018 IPR009212 Methylthioribose kinase GO:0009086|GO:0046522 KEGG: 00270+2.7.1.100|MetaCyc: PWY-6754 GYO_1683 115ac695f2c981230b5bad4ae2560bb6 397 SUPERFAMILY SSF56112 9 392 6.31E-97 T 14-10-2018 IPR011009 Protein kinase-like domain superfamily GYO_1683 115ac695f2c981230b5bad4ae2560bb6 397 Gene3D G3DSA:3.30.200.20 1 119 1.7E-49 T 14-10-2018 GYO_1683 115ac695f2c981230b5bad4ae2560bb6 397 TIGRFAM TIGR01767 MTRK: S-methyl-5-thioribose kinase 36 396 7.0E-191 T 14-10-2018 IPR009212 Methylthioribose kinase GO:0009086|GO:0046522 KEGG: 00270+2.7.1.100|MetaCyc: PWY-6754 GYO_3928 a9b7bb83b8d536d7c1289d605dff5d23 401 SUPERFAMILY SSF53756 153 386 6.59E-20 T 14-10-2018 GYO_3928 a9b7bb83b8d536d7c1289d605dff5d23 401 Gene3D G3DSA:3.40.50.11820 22 381 3.1E-139 T 14-10-2018 GYO_3928 a9b7bb83b8d536d7c1289d605dff5d23 401 Pfam PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase 15 387 1.3E-123 T 14-10-2018 IPR007554 CDP-glycerol glycerophosphotransferase GO:0016020|GO:0047355 GYO_3928 a9b7bb83b8d536d7c1289d605dff5d23 401 Gene3D G3DSA:3.40.50.12580 194 374 3.1E-139 T 14-10-2018 GYO_0773 0f405c902ab16cca56c671dc48d8aa63 147 SUPERFAMILY SSF69118 6 142 7.46E-45 T 14-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 GYO_0773 0f405c902ab16cca56c671dc48d8aa63 147 Pfam PF02627 Carboxymuconolactone decarboxylase family 12 91 8.5E-21 T 14-10-2018 IPR003779 Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 GYO_0773 0f405c902ab16cca56c671dc48d8aa63 147 Gene3D G3DSA:1.20.1290.10 1 147 8.2E-48 T 14-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 GYO_0773 0f405c902ab16cca56c671dc48d8aa63 147 TIGRFAM TIGR00778 ahpD_dom: alkylhydroperoxidase AhpD family core domain 28 78 6.3E-25 T 14-10-2018 IPR004675 Alkylhydroperoxidase AhpD core GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 GYO_3303 53aff2d151eec79230fa51baf0e422d2 218 SUPERFAMILY SSF53474 3 217 1.35E-24 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold GYO_3303 53aff2d151eec79230fa51baf0e422d2 218 Pfam PF12146 Serine aminopeptidase, S33 3 202 1.9E-46 T 14-10-2018 IPR022742 Serine aminopeptidase, S33 GYO_3303 53aff2d151eec79230fa51baf0e422d2 218 Gene3D G3DSA:3.40.50.1820 1 217 2.9E-39 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold GYO_3100 5923f38f4b0ebcc6771b95b516f1140f 257 PIRSF PIRSF000090 1 257 1.1E-79 T 14-10-2018 IPR012255 Electron transfer flavoprotein, beta subunit GO:0009055 Reactome: R-HSA-611105|Reactome: R-HSA-8876725 GYO_3100 5923f38f4b0ebcc6771b95b516f1140f 257 ProSitePatterns PS01065 Electron transfer flavoprotein beta-subunit signature. 155 175 - T 14-10-2018 IPR000049 Electron transfer flavoprotein, beta-subunit, conserved site GO:0009055 Reactome: R-HSA-611105|Reactome: R-HSA-8876725 GYO_3100 5923f38f4b0ebcc6771b95b516f1140f 257 SMART SM00893 21 211 2.1E-59 T 14-10-2018 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 GYO_3100 5923f38f4b0ebcc6771b95b516f1140f 257 Gene3D G3DSA:3.40.50.620 1 254 6.7E-83 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold GYO_3100 5923f38f4b0ebcc6771b95b516f1140f 257 Pfam PF01012 Electron transfer flavoprotein domain 23 206 7.8E-47 T 14-10-2018 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 GYO_3100 5923f38f4b0ebcc6771b95b516f1140f 257 SUPERFAMILY SSF52402 1 242 1.97E-74 T 14-10-2018 GYO_1475 050f4c7610e757d8cb6d288b69070b12 336 Gene3D G3DSA:3.40.50.720 1 247 1.3E-70 T 14-10-2018 GYO_1475 050f4c7610e757d8cb6d288b69070b12 336 Pfam PF00899 ThiF family 5 239 1.5E-56 T 14-10-2018 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 GYO_1475 050f4c7610e757d8cb6d288b69070b12 336 SUPERFAMILY SSF69572 3 326 3.01E-78 T 14-10-2018 IPR035985 Ubiquitin-activating enzyme GO:0008641 GYO_2327 b080d39ffcc98496c0486c3371114ad4 208 Hamap MF_01216 FMN-dependent NADH-azoreductase [azoR]. 2 208 29.297 T 14-10-2018 IPR023048 NADH-azoreductase, FMN-dependent GO:0016661|GO:0055114 GYO_2327 b080d39ffcc98496c0486c3371114ad4 208 Pfam PF02525 Flavodoxin-like fold 3 203 2.0E-43 T 14-10-2018 IPR003680 Flavodoxin-like fold GYO_2327 b080d39ffcc98496c0486c3371114ad4 208 Gene3D G3DSA:3.40.50.360 1 208 1.7E-59 T 14-10-2018 IPR029039 Flavoprotein-like superfamily GYO_2327 b080d39ffcc98496c0486c3371114ad4 208 SUPERFAMILY SSF52218 1 207 1.92E-49 T 14-10-2018 IPR029039 Flavoprotein-like superfamily GYO_1404 5652a796be6ba41992e9d659172788e8 422 SUPERFAMILY SSF103473 10 404 9.94E-69 T 14-10-2018 IPR036259 MFS transporter superfamily GYO_1404 5652a796be6ba41992e9d659172788e8 422 Pfam PF07690 Major Facilitator Superfamily 21 361 2.8E-54 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 GYO_1404 5652a796be6ba41992e9d659172788e8 422 Gene3D G3DSA:1.20.1250.20 4 399 9.2E-65 T 14-10-2018 GYO_1404 5652a796be6ba41992e9d659172788e8 422 PRINTS PR01035 Tetracycline resistance protein signature 21 37 3.9E-7 T 14-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 GYO_1404 5652a796be6ba41992e9d659172788e8 422 PRINTS PR01035 Tetracycline resistance protein signature 141 163 3.9E-7 T 14-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 GYO_1404 5652a796be6ba41992e9d659172788e8 422 PRINTS PR01035 Tetracycline resistance protein signature 284 305 3.9E-7 T 14-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 GYO_2020 572b7c13e7543c0f74e3138468577e20 92 SUPERFAMILY SSF103007 3 92 5.23E-31 T 14-10-2018 IPR036746 TT1725-like superfamily GYO_2020 572b7c13e7543c0f74e3138468577e20 92 Gene3D G3DSA:3.30.70.1120 1 92 2.2E-24 T 14-10-2018 IPR036746 TT1725-like superfamily GYO_2020 572b7c13e7543c0f74e3138468577e20 92 Pfam PF04456 Protein of unknown function (DUF503) 2 87 9.1E-31 T 14-10-2018 IPR007546 Protein of unknown function DUF503 GYO_0620 366ec385be535740a332d7febfc4e448 130 Pfam PF07977 FabA-like domain 6 123 7.8E-11 T 14-10-2018 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 GYO_0620 366ec385be535740a332d7febfc4e448 130 SUPERFAMILY SSF54637 5 127 1.3E-27 T 14-10-2018 IPR029069 HotDog domain superfamily GYO_0620 366ec385be535740a332d7febfc4e448 130 Gene3D G3DSA:3.10.129.10 3 129 3.8E-29 T 14-10-2018 GYO_4418 fe945db624154aa597c82411a884e0e6 479 ProSitePatterns PS00572 Glycosyl hydrolases family 1 active site. 373 381 - T 14-10-2018 IPR018120 Glycoside hydrolase family 1, active site GYO_4418 fe945db624154aa597c82411a884e0e6 479 SUPERFAMILY SSF51445 4 473 2.84E-162 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily GYO_4418 fe945db624154aa597c82411a884e0e6 479 Pfam PF00232 Glycosyl hydrolase family 1 4 476 1.4E-133 T 14-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 GYO_4418 fe945db624154aa597c82411a884e0e6 479 Gene3D G3DSA:3.20.20.80 2 479 2.1E-163 T 14-10-2018 GYO_4418 fe945db624154aa597c82411a884e0e6 479 ProSitePatterns PS00653 Glycosyl hydrolases family 1 N-terminal signature. 8 22 - T 14-10-2018 IPR033132 Glycosyl hydrolases family 1, N-terminal conserved site GYO_4418 fe945db624154aa597c82411a884e0e6 479 PRINTS PR00131 Glycosyl hydrolase family 1 signature 441 453 7.6E-18 T 14-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 GYO_4418 fe945db624154aa597c82411a884e0e6 479 PRINTS PR00131 Glycosyl hydrolase family 1 signature 304 318 7.6E-18 T 14-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 GYO_4418 fe945db624154aa597c82411a884e0e6 479 PRINTS PR00131 Glycosyl hydrolase family 1 signature 416 433 7.6E-18 T 14-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 GYO_4418 fe945db624154aa597c82411a884e0e6 479 PRINTS PR00131 Glycosyl hydrolase family 1 signature 394 405 7.6E-18 T 14-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 GYO_4418 fe945db624154aa597c82411a884e0e6 479 PRINTS PR00131 Glycosyl hydrolase family 1 signature 373 381 7.6E-18 T 14-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 GYO_1178 48493857582968cffac78d846d0d85e8 207 SUPERFAMILY SSF56037 20 201 1.1E-10 T 14-10-2018 GYO_3121 2c8c0ca35e2387e43a71ae7982fe5680 109 SUPERFAMILY SSF46785 11 103 1.24E-21 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily GYO_3121 2c8c0ca35e2387e43a71ae7982fe5680 109 Gene3D G3DSA:1.10.10.10 2 107 1.9E-31 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily GYO_3121 2c8c0ca35e2387e43a71ae7982fe5680 109 Pfam PF03551 Transcriptional regulator PadR-like family 15 79 1.1E-17 T 14-10-2018 IPR005149 Transcription regulator PadR, N-terminal GYO_2418 47d8fffd9405a9c8a83880a12f0e24c9 60 ProDom PD968187 BETA-DEFENSIN ANTIBIOTIC PRECURSOR ANTIMICROBIAL DEFENSIN BETA SIGNAL DEFENSIN BD-32 DEFB-32 1 60 1.0E-26 T 14-10-2018 GYO_0927 7fdae644d7c69018852b5a6a89dd2ab9 230 Pfam PF02308 MgtC family 13 142 1.1E-32 T 14-10-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 GYO_0927 7fdae644d7c69018852b5a6a89dd2ab9 230 PRINTS PR01837 MgtC/SapB protein signature 16 35 4.8E-41 T 14-10-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 GYO_0927 7fdae644d7c69018852b5a6a89dd2ab9 230 PRINTS PR01837 MgtC/SapB protein signature 97 121 4.8E-41 T 14-10-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 GYO_0927 7fdae644d7c69018852b5a6a89dd2ab9 230 PRINTS PR01837 MgtC/SapB protein signature 69 91 4.8E-41 T 14-10-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 GYO_0927 7fdae644d7c69018852b5a6a89dd2ab9 230 PRINTS PR01837 MgtC/SapB protein signature 35 53 4.8E-41 T 14-10-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 GYO_1591 fc15cdff40f02fa0ec8b54245b47dea5 813 SUPERFAMILY SSF49842 678 786 6.75E-10 T 14-10-2018 IPR008983 Tumour necrosis factor-like domain superfamily GO:0005515 GYO_1591 fc15cdff40f02fa0ec8b54245b47dea5 813 Gene3D G3DSA:2.60.120.40 666 796 1.8E-5 T 14-10-2018 IPR008983 Tumour necrosis factor-like domain superfamily GO:0005515 GYO_3571 4cbbe166daa9a976ed8f3ce2fe21127a 261 Pfam PF00005 ABC transporter 21 173 2.2E-21 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 GYO_3571 4cbbe166daa9a976ed8f3ce2fe21127a 261 ProSitePatterns PS00211 ABC transporters family signature. 148 162 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 GYO_3571 4cbbe166daa9a976ed8f3ce2fe21127a 261 SUPERFAMILY SSF52540 6 232 1.08E-42 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase GYO_3571 4cbbe166daa9a976ed8f3ce2fe21127a 261 SMART SM00382 30 225 6.5E-5 T 14-10-2018 IPR003593 AAA+ ATPase domain GYO_3571 4cbbe166daa9a976ed8f3ce2fe21127a 261 TIGRFAM TIGR01978 sufC: FeS assembly ATPase SufC 6 246 9.4E-114 T 14-10-2018 IPR010230 FeS cluster assembly SUF system, ATPase SufC GO:0005524 GYO_3571 4cbbe166daa9a976ed8f3ce2fe21127a 261 Gene3D G3DSA:3.40.50.300 5 250 1.0E-54 T 14-10-2018 GYO_2879 1ee43d6e305567a511d919b976223185 259 Pfam PF01925 Sulfite exporter TauE/SafE 9 252 6.5E-38 T 14-10-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 GYO_4019 4cd3c696f4263caa062b8edc710b6a79 290 Gene3D G3DSA:2.70.70.10 75 232 2.4E-57 T 14-10-2018 IPR011055 Duplicated hybrid motif GYO_4019 4cd3c696f4263caa062b8edc710b6a79 290 SUPERFAMILY SSF51261 111 220 4.24E-27 T 14-10-2018 IPR011055 Duplicated hybrid motif GYO_4019 4cd3c696f4263caa062b8edc710b6a79 290 Pfam PF01551 Peptidase family M23 119 216 8.0E-25 T 14-10-2018 IPR016047 Peptidase M23 GYO_3981 096ba60696b16fab2f783bfb742ac6ce 86 ProDom PD061728 YWQI YWQIA COIL COILED 1 86 3.0E-42 T 14-10-2018 IPR020299 Uncharacterised protein family YwqI GYO_3981 096ba60696b16fab2f783bfb742ac6ce 86 Pfam PF17279 Family of unknown function (DUF5344) 1 84 6.9E-26 T 14-10-2018 GYO_2871 85d27bdb2a845a12a0e011004d4b31df 122 Gene3D G3DSA:3.40.250.10 27 122 1.7E-28 T 14-10-2018 IPR036873 Rhodanese-like domain superfamily GYO_2871 85d27bdb2a845a12a0e011004d4b31df 122 SMART SM00450 32 122 3.1E-20 T 14-10-2018 IPR001763 Rhodanese-like domain GYO_2871 85d27bdb2a845a12a0e011004d4b31df 122 SUPERFAMILY SSF52821 7 121 1.7E-30 T 14-10-2018 IPR036873 Rhodanese-like domain superfamily GYO_2871 85d27bdb2a845a12a0e011004d4b31df 122 Pfam PF00581 Rhodanese-like domain 34 121 1.1E-14 T 14-10-2018 IPR001763 Rhodanese-like domain GYO_0665 f8500d29bb220039c111273285d6dcb6 226 SUPERFAMILY SSF52172 5 181 8.11E-36 T 14-10-2018 IPR011006 CheY-like superfamily GYO_0665 f8500d29bb220039c111273285d6dcb6 226 Pfam PF00072 Response regulator receiver domain 8 119 2.7E-29 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 GYO_0665 f8500d29bb220039c111273285d6dcb6 226 SUPERFAMILY SSF46785 165 211 5.69E-6 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily GYO_0665 f8500d29bb220039c111273285d6dcb6 226 SMART SM00448 6 119 2.2E-34 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 GYO_0665 f8500d29bb220039c111273285d6dcb6 226 Gene3D G3DSA:3.40.50.2300 2 143 5.2E-35 T 14-10-2018 GYO_0665 f8500d29bb220039c111273285d6dcb6 226 Gene3D G3DSA:1.10.10.10 163 214 1.0E-5 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily GYO_0665 f8500d29bb220039c111273285d6dcb6 226 PIRSF PIRSF006171 4 226 4.4E-84 T 14-10-2018 IPR024187 Signal transduction response regulator, citrate/malate metabolism GO:0000160|GO:0003700 GYO_0665 f8500d29bb220039c111273285d6dcb6 226 Pfam PF04703 FaeA-like protein 164 207 3.2E-5 T 14-10-2018 IPR006793 FaeA-like protein GO:0006355|GO:0009289 GYO_3391 2d11e6823e53b018c481553c53bd3d79 511 Gene3D G3DSA:1.20.1250.20 2 194 2.5E-22 T 14-10-2018 GYO_3391 2d11e6823e53b018c481553c53bd3d79 511 Pfam PF07690 Major Facilitator Superfamily 54 377 1.2E-28 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 GYO_3391 2d11e6823e53b018c481553c53bd3d79 511 SUPERFAMILY SSF103473 3 462 7.06E-31 T 14-10-2018 IPR036259 MFS transporter superfamily GYO_3391 2d11e6823e53b018c481553c53bd3d79 511 Gene3D G3DSA:1.20.1250.20 265 459 1.3E-5 T 14-10-2018 GYO_0145 7bfa291f1121168d7d711941c440197a 95 Gene3D G3DSA:3.30.70.330 1 95 8.5E-33 T 14-10-2018 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily GYO_0145 7bfa291f1121168d7d711941c440197a 95 Hamap MF_01369_B 50S ribosomal protein L23 [rplW]. 5 95 21.84 T 14-10-2018 IPR013025 Ribosomal protein L25/L23 GO:0003735|GO:0005840|GO:0006412 GYO_0145 7bfa291f1121168d7d711941c440197a 95 Pfam PF00276 Ribosomal protein L23 6 88 2.7E-32 T 14-10-2018 IPR013025 Ribosomal protein L25/L23 GO:0003735|GO:0005840|GO:0006412 GYO_0145 7bfa291f1121168d7d711941c440197a 95 SUPERFAMILY SSF54189 2 91 1.15E-30 T 14-10-2018 IPR012678 Ribosomal protein L23/L15e core domain superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 GYO_0145 7bfa291f1121168d7d711941c440197a 95 ProSitePatterns PS00050 Ribosomal protein L23 signature. 77 92 - T 14-10-2018 IPR001014 Ribosomal protein L23/L25, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 GYO_3520 9389e430c8e3c6c6bd7983b1d53466a6 341 SUPERFAMILY SSF56112 5 316 8.16E-20 T 14-10-2018 IPR011009 Protein kinase-like domain superfamily GYO_3520 9389e430c8e3c6c6bd7983b1d53466a6 341 TIGRFAM TIGR02905 spore_yutH: spore coat protein YutH 4 311 1.9E-119 T 14-10-2018 IPR014254 Spore coat protein YutH GYO_3520 9389e430c8e3c6c6bd7983b1d53466a6 341 Gene3D G3DSA:3.90.1200.10 96 318 2.4E-25 T 14-10-2018 GYO_3271 ff44437dd0d501d67ef013d57316eeb4 448 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 248 285 - T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 GYO_3271 ff44437dd0d501d67ef013d57316eeb4 448 SUPERFAMILY SSF53383 10 443 2.02E-127 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase GYO_3271 ff44437dd0d501d67ef013d57316eeb4 448 TIGRFAM TIGR00508 bioA: adenosylmethionine-8-amino-7-oxononanoate transaminase 13 441 6.3E-170 T 14-10-2018 IPR005815 Adenosylmethionine--8-amino-7-oxononanoate aminotransferase BioA GO:0004015|GO:0009102 KEGG: 00780+2.6.1.62 GYO_3271 ff44437dd0d501d67ef013d57316eeb4 448 PIRSF PIRSF000521 22 443 9.9E-30 T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 GYO_3271 ff44437dd0d501d67ef013d57316eeb4 448 Gene3D G3DSA:3.40.640.10 62 338 1.2E-166 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 GYO_3271 ff44437dd0d501d67ef013d57316eeb4 448 Hamap MF_00834 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase [bioA]. 1 443 54.0 T 14-10-2018 IPR005815 Adenosylmethionine--8-amino-7-oxononanoate aminotransferase BioA GO:0004015|GO:0009102 KEGG: 00780+2.6.1.62 GYO_3271 ff44437dd0d501d67ef013d57316eeb4 448 Pfam PF00202 Aminotransferase class-III 22 440 4.9E-116 T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 GYO_3271 ff44437dd0d501d67ef013d57316eeb4 448 Gene3D G3DSA:3.90.1150.10 10 440 1.2E-166 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 GYO_4372 1bd8f437110c04a0f81783cfbb0653a1 325 Gene3D G3DSA:1.10.287.130 120 165 1.6E-29 T 14-10-2018 GYO_4372 1bd8f437110c04a0f81783cfbb0653a1 325 SUPERFAMILY SSF55874 158 321 8.66E-32 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily GYO_4372 1bd8f437110c04a0f81783cfbb0653a1 325 Gene3D G3DSA:3.30.565.10 166 320 1.6E-29 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily GYO_4372 1bd8f437110c04a0f81783cfbb0653a1 325 SMART SM00387 213 325 4.7E-22 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase GYO_4372 1bd8f437110c04a0f81783cfbb0653a1 325 PRINTS PR00344 Bacterial sensor protein C-terminal signature 285 303 1.4E-8 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 GYO_4372 1bd8f437110c04a0f81783cfbb0653a1 325 PRINTS PR00344 Bacterial sensor protein C-terminal signature 251 265 1.4E-8 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 GYO_4372 1bd8f437110c04a0f81783cfbb0653a1 325 PRINTS PR00344 Bacterial sensor protein C-terminal signature 269 279 1.4E-8 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 GYO_4372 1bd8f437110c04a0f81783cfbb0653a1 325 PRINTS PR00344 Bacterial sensor protein C-terminal signature 309 322 1.4E-8 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 GYO_4372 1bd8f437110c04a0f81783cfbb0653a1 325 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 214 321 1.4E-18 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase GYO_3773 f9ce7dd607196e77f14e2f075eb28188 489 SUPERFAMILY SSF53474 3 481 1.13E-139 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold GYO_3773 f9ce7dd607196e77f14e2f075eb28188 489 ProSitePatterns PS00941 Carboxylesterases type-B signature 2. 80 90 - T 14-10-2018 IPR019819 Carboxylesterase type B, conserved site GYO_3773 f9ce7dd607196e77f14e2f075eb28188 489 ProSitePatterns PS00122 Carboxylesterases type-B serine active site. 176 191 - T 14-10-2018 IPR019826 Carboxylesterase type B, active site GYO_3773 f9ce7dd607196e77f14e2f075eb28188 489 Pfam PF00135 Carboxylesterase family 4 478 5.3E-128 T 14-10-2018 IPR002018 Carboxylesterase, type B GYO_3773 f9ce7dd607196e77f14e2f075eb28188 489 PRINTS PR00878 Cholinesterase signature 399 411 1.8E-6 T 14-10-2018 IPR000997 Cholinesterase GO:0004104 Reactome: R-HSA-112311|Reactome: R-HSA-1483191|Reactome: R-HSA-422085 GYO_3773 f9ce7dd607196e77f14e2f075eb28188 489 PRINTS PR00878 Cholinesterase signature 104 133 1.8E-6 T 14-10-2018 IPR000997 Cholinesterase GO:0004104 Reactome: R-HSA-112311|Reactome: R-HSA-1483191|Reactome: R-HSA-422085 GYO_3773 f9ce7dd607196e77f14e2f075eb28188 489 Gene3D G3DSA:3.40.50.1820 1 489 1.5E-191 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold GYO_3785 61972d915afc78762d02a9eeda27ce30 104 Gene3D G3DSA:1.10.3730.20 1 104 6.9E-31 T 14-10-2018 GYO_3785 61972d915afc78762d02a9eeda27ce30 104 SUPERFAMILY SSF103481 5 102 8.37E-19 T 14-10-2018 GYO_3785 61972d915afc78762d02a9eeda27ce30 104 Pfam PF00893 Small Multidrug Resistance protein 1 93 1.6E-32 T 14-10-2018 IPR000390 Small multidrug resistance protein family GO:0016021 GYO_0178 8827cade62cdee413b36432cff19ad10 255 SUPERFAMILY SSF53335 43 240 5.25E-25 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase GYO_0178 8827cade62cdee413b36432cff19ad10 255 Gene3D G3DSA:3.40.50.150 50 240 1.6E-19 T 14-10-2018 GYO_0178 8827cade62cdee413b36432cff19ad10 255 Pfam PF08241 Methyltransferase domain 63 158 2.0E-14 T 14-10-2018 IPR013216 Methyltransferase type 11 GO:0008168 GYO_4342 5964c116cc372476278818b961e277af 508 Gene3D G3DSA:1.20.200.10 196 501 1.0E-122 T 14-10-2018 GYO_4342 5964c116cc372476278818b961e277af 508 SUPERFAMILY SSF48557 1 495 2.2E-195 T 14-10-2018 IPR008948 L-Aspartase-like GO:0003824 GYO_4342 5964c116cc372476278818b961e277af 508 Hamap MF_00229 Histidine ammonia-lyase [hutH]. 1 500 45.689 T 14-10-2018 IPR005921 Histidine ammonia-lyase GO:0004397|GO:0005737|GO:0006548 KEGG: 00340+4.3.1.3|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 GYO_4342 5964c116cc372476278818b961e277af 508 Pfam PF00221 Aromatic amino acid lyase 9 467 3.5E-195 T 14-10-2018 IPR001106 Aromatic amino acid lyase Reactome: R-HSA-70921 GYO_4342 5964c116cc372476278818b961e277af 508 ProSitePatterns PS00488 Phenylalanine and histidine ammonia-lyases signature. 137 153 - T 14-10-2018 IPR022313 Phenylalanine/histidine ammonia-lyases, active site GO:0016841 Reactome: R-HSA-70921 GYO_4342 5964c116cc372476278818b961e277af 508 Gene3D G3DSA:1.10.275.10 1 195 2.0E-69 T 14-10-2018 IPR024083 Fumarase/histidase, N-terminal GYO_4342 5964c116cc372476278818b961e277af 508 TIGRFAM TIGR01225 hutH: histidine ammonia-lyase 2 504 6.7E-238 T 14-10-2018 IPR005921 Histidine ammonia-lyase GO:0004397|GO:0005737|GO:0006548 KEGG: 00340+4.3.1.3|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 GYO_0733 da44c03b727df61895a12e14ae9f403c 158 Pfam PF02559 CarD-like/TRCF domain 7 115 4.3E-18 T 14-10-2018 IPR003711 CarD-like/TRCF domain GYO_0733 da44c03b727df61895a12e14ae9f403c 158 SMART SM01058 6 116 1.3E-28 T 14-10-2018 IPR003711 CarD-like/TRCF domain GYO_0733 da44c03b727df61895a12e14ae9f403c 158 SUPERFAMILY SSF141259 6 66 2.35E-13 T 14-10-2018 IPR036101 CarD-like/TRCF domain superfamily GYO_0733 da44c03b727df61895a12e14ae9f403c 158 Gene3D G3DSA:2.30.30.840 2 67 2.8E-27 T 14-10-2018 GYO_0733 da44c03b727df61895a12e14ae9f403c 158 Gene3D G3DSA:1.20.58.1290 68 158 1.3E-25 T 14-10-2018 GYO_0914 9f2a8d3e28939b63f13b98f910ad8104 140 SUPERFAMILY SSF54909 63 133 5.9E-11 T 14-10-2018 IPR011008 Dimeric alpha-beta barrel GYO_0914 9f2a8d3e28939b63f13b98f910ad8104 140 Gene3D G3DSA:1.10.10.10 1 52 4.4E-21 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily GYO_0914 9f2a8d3e28939b63f13b98f910ad8104 140 Pfam PF01037 Lrp/AsnC ligand binding domain 69 131 2.6E-9 T 14-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain GYO_0914 9f2a8d3e28939b63f13b98f910ad8104 140 Pfam PF13412 Winged helix-turn-helix DNA-binding 1 48 1.7E-16 T 14-10-2018 GYO_0914 9f2a8d3e28939b63f13b98f910ad8104 140 SUPERFAMILY SSF46785 1 59 1.42E-15 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily GYO_0914 9f2a8d3e28939b63f13b98f910ad8104 140 ProSitePatterns PS00519 AsnC-type HTH domain signature. 19 45 - T 14-10-2018 IPR019885 Transcription regulator HTH, AsnC-type, conserved site GYO_0914 9f2a8d3e28939b63f13b98f910ad8104 140 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 1 17 7.9E-16 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 GYO_0914 9f2a8d3e28939b63f13b98f910ad8104 140 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 17 28 7.9E-16 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 GYO_0914 9f2a8d3e28939b63f13b98f910ad8104 140 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 28 47 7.9E-16 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 GYO_0914 9f2a8d3e28939b63f13b98f910ad8104 140 SMART SM00344 1 105 3.7E-27 T 14-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 GYO_0914 9f2a8d3e28939b63f13b98f910ad8104 140 Gene3D G3DSA:3.30.70.920 53 136 2.2E-14 T 14-10-2018 GYO_3645 923e4cac850e12e929feb5a0ab332ff2 46 TIGRFAM TIGR02863 spore_sspJ: small, acid-soluble spore protein, SspJ family 1 46 2.7E-32 T 14-10-2018 IPR014220 Small acid-soluble spore protein, SspJ GYO_3645 923e4cac850e12e929feb5a0ab332ff2 46 Pfam PF09575 Small spore protein J (Spore_SspJ) 1 46 9.7E-30 T 14-10-2018 IPR014220 Small acid-soluble spore protein, SspJ GYO_0828 305d045c3869e8f84bcbdb9e781a469f 114 Gene3D G3DSA:1.20.120.530 1 111 1.8E-16 T 14-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal GYO_0828 305d045c3869e8f84bcbdb9e781a469f 114 Pfam PF07729 FCD domain 2 98 2.2E-15 T 14-10-2018 IPR011711 GntR, C-terminal GYO_0828 305d045c3869e8f84bcbdb9e781a469f 114 SUPERFAMILY SSF48008 2 107 6.02E-17 T 14-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal GYO_1539 59fc711392107c587969575932536007 479 Gene3D G3DSA:1.10.2020.10 52 142 3.2E-197 T 14-10-2018 GYO_1539 59fc711392107c587969575932536007 479 SUPERFAMILY SSF51556 9 471 4.25E-184 T 14-10-2018 IPR032466 Metal-dependent hydrolase GYO_1539 59fc711392107c587969575932536007 479 Gene3D G3DSA:3.20.20.140 13 470 3.2E-197 T 14-10-2018 GYO_1539 59fc711392107c587969575932536007 479 Pfam PF02614 Glucuronate isomerase 7 470 5.7E-236 T 14-10-2018 IPR003766 Uronate isomerase GO:0006064|GO:0008880 KEGG: 00040+5.3.1.12|MetaCyc: PWY-7247|MetaCyc: PWY-7248 GYO_1539 59fc711392107c587969575932536007 479 Hamap MF_00675 Uronate isomerase [uxaC]. 8 472 50.443 T 14-10-2018 IPR003766 Uronate isomerase GO:0006064|GO:0008880 KEGG: 00040+5.3.1.12|MetaCyc: PWY-7247|MetaCyc: PWY-7248 GYO_4072 682d3e489e7b4f5209e0132ce72d06a5 154 SUPERFAMILY SSF55729 11 133 4.55E-8 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase GYO_4072 682d3e489e7b4f5209e0132ce72d06a5 154 Gene3D G3DSA:3.40.630.30 9 144 3.8E-8 T 14-10-2018 GYO_0498 4960b53f7023785a896790abd79e759a 363 PIRSF PIRSF026508 1 363 2.7E-131 T 14-10-2018 IPR008863 Toxic anion resistance GYO_0498 4960b53f7023785a896790abd79e759a 363 Pfam PF05816 Toxic anion resistance protein (TelA) 35 359 5.0E-107 T 14-10-2018 IPR008863 Toxic anion resistance GYO_1345 bae276d27f8f4893d4399f8a54662df7 299 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 188 216 - T 14-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 GYO_1345 bae276d27f8f4893d4399f8a54662df7 299 SUPERFAMILY SSF51735 51 296 4.35E-71 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily GYO_1345 bae276d27f8f4893d4399f8a54662df7 299 Gene3D G3DSA:3.40.50.720 4 296 6.9E-86 T 14-10-2018 GYO_1345 bae276d27f8f4893d4399f8a54662df7 299 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 61 296 9.9E-53 T 14-10-2018 GYO_1345 bae276d27f8f4893d4399f8a54662df7 299 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 201 220 9.1E-34 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR GYO_1345 bae276d27f8f4893d4399f8a54662df7 299 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 129 140 9.1E-34 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR GYO_1345 bae276d27f8f4893d4399f8a54662df7 299 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 222 239 9.1E-34 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR GYO_1345 bae276d27f8f4893d4399f8a54662df7 299 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 53 70 9.1E-34 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR GYO_1345 bae276d27f8f4893d4399f8a54662df7 299 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 260 280 9.1E-34 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR GYO_1345 bae276d27f8f4893d4399f8a54662df7 299 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 175 191 9.1E-34 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR GYO_1433 996bd3d49f2d2a67de8a55a6d119bccc 185 ProDom PD032558 YJAV MED CDS GENES ARGF 1 116 1.0E-49 T 14-10-2018 GYO_2991 97fa2d6bbb5deaf785c45a7c70f07a78 138 Pfam PF02082 Transcriptional regulator 1 82 2.8E-26 T 14-10-2018 IPR000944 Transcription regulator Rrf2-type GYO_2991 97fa2d6bbb5deaf785c45a7c70f07a78 138 Gene3D G3DSA:1.10.10.10 1 138 4.1E-51 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily GYO_2991 97fa2d6bbb5deaf785c45a7c70f07a78 138 ProSitePatterns PS01332 Rrf2-type HTH domain signature. 49 67 - T 14-10-2018 IPR030489 Transcription regulator Rrf2-type, conserved site GYO_2991 97fa2d6bbb5deaf785c45a7c70f07a78 138 SUPERFAMILY SSF46785 2 125 1.43E-32 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily GYO_2991 97fa2d6bbb5deaf785c45a7c70f07a78 138 TIGRFAM TIGR00738 rrf2_super: Rrf2 family protein 2 124 8.9E-34 T 14-10-2018 IPR000944 Transcription regulator Rrf2-type GYO_2727 3b04e8b89019d4dc93379cd979e0ba55 124 ProDom PD078266 COMPETENCE COMGG LATE MACHINERY OPERON DNA THE PART PRECURSOR PROBABLY 1 124 3.0E-49 T 14-10-2018 IPR020372 Competence operon G protein 7, ComGG GYO_2727 3b04e8b89019d4dc93379cd979e0ba55 124 Pfam PF14173 ComG operon protein 7 30 124 7.0E-24 T 14-10-2018 IPR020372 Competence operon G protein 7, ComGG GYO_1554 70d7d01bb4a2402f13d504f0d4251080 59 Pfam PF03795 YCII-related domain 1 57 1.3E-10 T 14-10-2018 IPR005545 YCII-related GYO_1554 70d7d01bb4a2402f13d504f0d4251080 59 SUPERFAMILY SSF54909 1 57 7.78E-10 T 14-10-2018 IPR011008 Dimeric alpha-beta barrel GYO_3092 4664bd590a7af02ac83800b3c3430ac5 148 Gene3D G3DSA:3.30.1380.20 1 148 1.5E-64 T 14-10-2018 GYO_3092 4664bd590a7af02ac83800b3c3430ac5 148 SUPERFAMILY SSF111126 17 127 1.46E-22 T 14-10-2018 IPR024096 NO signalling/Golgi transport ligand-binding domain superfamily GYO_3092 4664bd590a7af02ac83800b3c3430ac5 148 Pfam PF10702 Protein of unknown function (DUF2507) 20 141 2.3E-48 T 14-10-2018 IPR019642 Protein of unknown function DUF2507 GYO_4281 f350f07b40b6514a9eac22a309753823 265 Pfam PF01522 Polysaccharide deacetylase 100 225 1.2E-36 T 14-10-2018 IPR002509 NodB homology domain GO:0005975|GO:0016810 GYO_4281 f350f07b40b6514a9eac22a309753823 265 SUPERFAMILY SSF88713 64 232 2.67E-43 T 14-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 GYO_4281 f350f07b40b6514a9eac22a309753823 265 Gene3D G3DSA:3.20.20.370 41 261 1.3E-67 T 14-10-2018 GYO_1911 110da77b45f7a83efae4b0e4c8f8459d 261 SUPERFAMILY SSF53800 2 243 7.96E-52 T 14-10-2018 GYO_1911 110da77b45f7a83efae4b0e4c8f8459d 261 Pfam PF01903 CbiX 10 113 6.6E-29 T 14-10-2018 IPR002762 Cobalamin (vitamin B12) biosynthesis CbiX GO:0009236|GO:0016852 KEGG: 00860+4.99.1.3|MetaCyc: PWY-7377 GYO_1911 110da77b45f7a83efae4b0e4c8f8459d 261 Pfam PF01903 CbiX 134 234 1.8E-21 T 14-10-2018 IPR002762 Cobalamin (vitamin B12) biosynthesis CbiX GO:0009236|GO:0016852 KEGG: 00860+4.99.1.3|MetaCyc: PWY-7377 GYO_1911 110da77b45f7a83efae4b0e4c8f8459d 261 Gene3D G3DSA:3.40.50.1400 124 246 2.4E-17 T 14-10-2018 GYO_1911 110da77b45f7a83efae4b0e4c8f8459d 261 Gene3D G3DSA:3.40.50.1400 1 120 7.6E-28 T 14-10-2018 GYO_3304 56135dd5265e46819d5ad79120bf72a9 244 SUPERFAMILY SSF51161 75 242 6.1E-47 T 14-10-2018 IPR011004 Trimeric LpxA-like superfamily GYO_3304 56135dd5265e46819d5ad79120bf72a9 244 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 160 193 5.5E-8 T 14-10-2018 IPR001451 Hexapeptide repeat GYO_3304 56135dd5265e46819d5ad79120bf72a9 244 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 85 117 0.001 T 14-10-2018 IPR001451 Hexapeptide repeat GYO_3304 56135dd5265e46819d5ad79120bf72a9 244 Gene3D G3DSA:2.160.10.10 73 244 8.4E-72 T 14-10-2018 GYO_3415 3dfc4631a7f073283a85bc08f4d12d71 554 SUPERFAMILY SSF51445 3 473 6.16E-151 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily GYO_3415 3dfc4631a7f073283a85bc08f4d12d71 554 Gene3D G3DSA:3.20.20.80 5 468 1.3E-190 T 14-10-2018 GYO_3415 3dfc4631a7f073283a85bc08f4d12d71 554 Pfam PF00128 Alpha amylase, catalytic domain 28 373 6.2E-114 T 14-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 GYO_3415 3dfc4631a7f073283a85bc08f4d12d71 554 Pfam PF16657 Maltogenic Amylase, C-terminal domain 476 550 6.0E-7 T 14-10-2018 IPR032091 Maltogenic Amylase, C-terminal GYO_3415 3dfc4631a7f073283a85bc08f4d12d71 554 SUPERFAMILY SSF51011 476 552 3.73E-15 T 14-10-2018 GYO_3415 3dfc4631a7f073283a85bc08f4d12d71 554 SMART SM00642 13 415 1.1E-160 T 14-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 GYO_3415 3dfc4631a7f073283a85bc08f4d12d71 554 Gene3D G3DSA:3.90.400.10 102 173 1.3E-190 T 14-10-2018 GYO_3415 3dfc4631a7f073283a85bc08f4d12d71 554 Gene3D G3DSA:2.60.40.1180 477 553 1.0E-18 T 14-10-2018 IPR013780 Glycosyl hydrolase, all-beta GYO_0518 b9a22ae4f6c574c473c04605ed73d979 197 Pfam PF13238 AAA domain 3 127 1.8E-8 T 14-10-2018 GYO_0518 b9a22ae4f6c574c473c04605ed73d979 197 Gene3D G3DSA:3.40.50.300 1 182 2.6E-61 T 14-10-2018 GYO_0518 b9a22ae4f6c574c473c04605ed73d979 197 SUPERFAMILY SSF52540 2 124 4.52E-12 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase GYO_0160 db79bd5df674f1cb28ec63f6b39adbfc 59 Gene3D G3DSA:3.30.1390.20 1 58 2.5E-27 T 14-10-2018 IPR036919 Ribosomal protein L30, ferredoxin-like fold domain superfamily GYO_0160 db79bd5df674f1cb28ec63f6b39adbfc 59 ProSitePatterns PS00634 Ribosomal protein L30 signature. 22 54 - T 14-10-2018 IPR018038 Ribosomal protein L30, conserved site GYO_0160 db79bd5df674f1cb28ec63f6b39adbfc 59 TIGRFAM TIGR01308 rpmD_bact: ribosomal protein uL30 4 58 7.7E-26 T 14-10-2018 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 GYO_0160 db79bd5df674f1cb28ec63f6b39adbfc 59 SUPERFAMILY SSF55129 1 58 4.84E-21 T 14-10-2018 IPR036919 Ribosomal protein L30, ferredoxin-like fold domain superfamily GYO_0160 db79bd5df674f1cb28ec63f6b39adbfc 59 Pfam PF00327 Ribosomal protein L30p/L7e 5 54 3.0E-20 T 14-10-2018 IPR016082 Ribosomal protein L30, ferredoxin-like fold domain GYO_0160 db79bd5df674f1cb28ec63f6b39adbfc 59 PIRSF PIRSF002211 1 59 2.9E-28 T 14-10-2018 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 GYO_0160 db79bd5df674f1cb28ec63f6b39adbfc 59 Hamap MF_01371_B 50S ribosomal protein L30 [rpmD]. 1 58 19.58 T 14-10-2018 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 GYO_1726 4fa1bda0921c1952136baf9129302719 79 Pfam PF11132 Transcriptional regulator protein (SplA) 3 74 2.1E-38 T 14-10-2018 IPR022608 Transcription regulator SplA GYO_1726 4fa1bda0921c1952136baf9129302719 79 ProDom PD028055 SPLA TRANSCRIPTIONAL TRANSCRIPTION REGULATOR REGULATION 5 74 3.0E-34 T 14-10-2018 GYO_0647 84bf250511e8f0886c2c51d5e34ba97a 576 Pfam PF10096 Uncharacterized protein conserved in bacteria (DUF2334) 216 481 7.4E-62 T 14-10-2018 IPR018763 Protein of unknown function DUF2334 GYO_0503 9f2bb170425fa3a4d264e1d79f702d2d 282 Gene3D G3DSA:1.10.3720.10 85 275 3.2E-34 T 14-10-2018 IPR035906 MetI-like superfamily GYO_0503 9f2bb170425fa3a4d264e1d79f702d2d 282 SUPERFAMILY SSF161098 86 269 2.09E-38 T 14-10-2018 IPR035906 MetI-like superfamily GYO_0503 9f2bb170425fa3a4d264e1d79f702d2d 282 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 108 265 1.2E-21 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 GYO_2797 e36d519b20ce28155f33efedb64b9e76 123 Gene3D G3DSA:1.10.3830.10 5 123 4.6E-39 T 14-10-2018 IPR036945 Diacylglycerol kinase (DAGK) superfamily GO:0008610|GO:0016020|GO:0016301 KEGG: 00561+2.7.1.107|KEGG: 00564+2.7.1.107|KEGG: 04070+2.7.1.107|MetaCyc: PWY-7039|MetaCyc: PWY-7817 GYO_2797 e36d519b20ce28155f33efedb64b9e76 123 Pfam PF01219 Prokaryotic diacylglycerol kinase 19 119 1.9E-34 T 14-10-2018 IPR000829 DAGK family GO:0008654|GO:0016020|GO:0016301 KEGG: 00561+2.7.1.107|KEGG: 00564+2.7.1.107|KEGG: 04070+2.7.1.107|MetaCyc: PWY-7039|MetaCyc: PWY-7817 GYO_2797 e36d519b20ce28155f33efedb64b9e76 123 ProSitePatterns PS01069 Prokaryotic diacylglycerol kinase signature. 72 83 - T 14-10-2018 IPR000829 DAGK family GO:0008654|GO:0016020|GO:0016301 KEGG: 00561+2.7.1.107|KEGG: 00564+2.7.1.107|KEGG: 04070+2.7.1.107|MetaCyc: PWY-7039|MetaCyc: PWY-7817 GYO_0426 8314afa792eb38a76708a893f467ba4b 171 Pfam PF01066 CDP-alcohol phosphatidyltransferase 1 61 2.1E-12 T 14-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 GYO_0426 8314afa792eb38a76708a893f467ba4b 171 TIGRFAM TIGR00473 pssA: CDP-diacylglycerol-serine O-phosphatidyltransferase 3 155 5.9E-62 T 14-10-2018 IPR004533 CDP-diacylglycerol--serine O-phosphatidyltransferase KEGG: 00260+2.7.8.8|KEGG: 00564+2.7.8.8|MetaCyc: PWY-5669 GYO_0426 8314afa792eb38a76708a893f467ba4b 171 Gene3D G3DSA:1.20.120.1760 1 149 5.0E-9 T 14-10-2018 GYO_0426 8314afa792eb38a76708a893f467ba4b 171 ProSitePatterns PS00379 CDP-alcohol phosphatidyltransferases signature. 39 61 - T 14-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 GYO_3680 c122708caea4de9aa7e5498c29819395 76 Pfam PF03840 Preprotein translocase SecG subunit 4 75 3.1E-24 T 14-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 GYO_3680 c122708caea4de9aa7e5498c29819395 76 TIGRFAM TIGR00810 secG: preprotein translocase, SecG subunit 3 75 5.7E-25 T 14-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 GYO_3680 c122708caea4de9aa7e5498c29819395 76 PRINTS PR01651 Protein-export SecG membrane protein signature 3 23 1.6E-14 T 14-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 GYO_3680 c122708caea4de9aa7e5498c29819395 76 PRINTS PR01651 Protein-export SecG membrane protein signature 23 37 1.6E-14 T 14-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 GYO_3680 c122708caea4de9aa7e5498c29819395 76 PRINTS PR01651 Protein-export SecG membrane protein signature 56 76 1.6E-14 T 14-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 GYO_0328 5f94cf517a3e08333b700f4bce2966d6 54 Pfam PF09693 Phage uncharacterised protein (Phage_XkdX) 17 52 1.1E-9 T 14-10-2018 IPR010022 Protein of unknown function XkdX GYO_0328 5f94cf517a3e08333b700f4bce2966d6 54 TIGRFAM TIGR01669 phage_XkdX: phage uncharacterized protein, XkdX family 11 54 1.8E-22 T 14-10-2018 IPR010022 Protein of unknown function XkdX GYO_0249 5f94cf517a3e08333b700f4bce2966d6 54 Pfam PF09693 Phage uncharacterised protein (Phage_XkdX) 17 52 1.1E-9 T 14-10-2018 IPR010022 Protein of unknown function XkdX GYO_0249 5f94cf517a3e08333b700f4bce2966d6 54 TIGRFAM TIGR01669 phage_XkdX: phage uncharacterized protein, XkdX family 11 54 1.8E-22 T 14-10-2018 IPR010022 Protein of unknown function XkdX GYO_3498 6e320808c45a99dbfa1b582670051c0f 158 Pfam PF02681 Divergent PAP2 family 5 148 1.9E-49 T 14-10-2018 IPR003832 Protein of unknown function DUF212 GYO_0136 88350fcc9faa45e636680df7234e8cde 82 PRINTS PR00884 Ribosomal protein HS6 signature 70 82 9.1E-7 T 14-10-2018 IPR000948 Ribosomal protein L7Ae, prokaryotes GO:0003735|GO:0005622|GO:0005840|GO:0006412 GYO_0136 88350fcc9faa45e636680df7234e8cde 82 PRINTS PR00884 Ribosomal protein HS6 signature 20 30 9.1E-7 T 14-10-2018 IPR000948 Ribosomal protein L7Ae, prokaryotes GO:0003735|GO:0005622|GO:0005840|GO:0006412 GYO_0136 88350fcc9faa45e636680df7234e8cde 82 PRINTS PR00884 Ribosomal protein HS6 signature 30 41 9.1E-7 T 14-10-2018 IPR000948 Ribosomal protein L7Ae, prokaryotes GO:0003735|GO:0005622|GO:0005840|GO:0006412 GYO_0136 88350fcc9faa45e636680df7234e8cde 82 PRINTS PR00884 Ribosomal protein HS6 signature 56 66 9.1E-7 T 14-10-2018 IPR000948 Ribosomal protein L7Ae, prokaryotes GO:0003735|GO:0005622|GO:0005840|GO:0006412 GYO_0136 88350fcc9faa45e636680df7234e8cde 82 SUPERFAMILY SSF55315 4 81 2.77E-20 T 14-10-2018 IPR029064 50S ribosomal protein L30e-like GYO_0136 88350fcc9faa45e636680df7234e8cde 82 Gene3D G3DSA:3.30.1330.30 1 82 4.3E-26 T 14-10-2018 IPR029064 50S ribosomal protein L30e-like GYO_0136 88350fcc9faa45e636680df7234e8cde 82 Hamap MF_00574 Putative ribosomal protein L7Ae-like. 2 82 24.472 T 14-10-2018 IPR023460 Ribosomal protein L7Ae, putative GYO_0136 88350fcc9faa45e636680df7234e8cde 82 Pfam PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family 5 81 5.9E-16 T 14-10-2018 IPR004038 Ribosomal protein L7Ae/L30e/S12e/Gadd45 GYO_1833 13ea6c4983e90567796dbe6be1a651bd 356 SUPERFAMILY SSF81464 14 112 2.62E-18 T 14-10-2018 IPR036257 Cytochrome C oxidase subunit II, transmembrane domain superfamily Reactome: R-HSA-5628897|Reactome: R-HSA-611105 GYO_1833 13ea6c4983e90567796dbe6be1a651bd 356 PRINTS PR01166 Cytochrome c oxidase subunit II signature 84 96 4.0E-5 T 14-10-2018 GYO_1833 13ea6c4983e90567796dbe6be1a651bd 356 PRINTS PR01166 Cytochrome c oxidase subunit II signature 96 116 4.0E-5 T 14-10-2018 GYO_1833 13ea6c4983e90567796dbe6be1a651bd 356 PRINTS PR01166 Cytochrome c oxidase subunit II signature 217 234 4.0E-5 T 14-10-2018 GYO_1833 13ea6c4983e90567796dbe6be1a651bd 356 SUPERFAMILY SSF46626 257 352 2.64E-17 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 GYO_1833 13ea6c4983e90567796dbe6be1a651bd 356 Pfam PF00116 Cytochrome C oxidase subunit II, periplasmic domain 154 234 1.3E-11 T 14-10-2018 IPR002429 Cytochrome c oxidase subunit II-like C-terminal GO:0004129|GO:0005507|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 GYO_1833 13ea6c4983e90567796dbe6be1a651bd 356 ProSitePatterns PS00078 CO II and nitrous oxide reductase dinuclear copper centers signature. 174 228 - T 14-10-2018 IPR001505 Copper centre Cu(A) GO:0005507 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 GYO_1833 13ea6c4983e90567796dbe6be1a651bd 356 TIGRFAM TIGR02866 CoxB: cytochrome c oxidase, subunit II 31 244 4.0E-49 T 14-10-2018 IPR014222 Cytochrome c oxidase, subunit II GO:0016021|GO:0016491 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 GYO_1833 13ea6c4983e90567796dbe6be1a651bd 356 Gene3D G3DSA:2.60.40.2600 126 356 3.7E-63 T 14-10-2018 GYO_1833 13ea6c4983e90567796dbe6be1a651bd 356 SUPERFAMILY SSF49503 128 280 6.49E-38 T 14-10-2018 IPR008972 Cupredoxin GYO_1833 13ea6c4983e90567796dbe6be1a651bd 356 Pfam PF00034 Cytochrome c 259 352 7.8E-12 T 14-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 GYO_1833 13ea6c4983e90567796dbe6be1a651bd 356 Gene3D G3DSA:1.10.287.90 25 115 8.5E-22 T 14-10-2018 IPR036257 Cytochrome C oxidase subunit II, transmembrane domain superfamily Reactome: R-HSA-5628897|Reactome: R-HSA-611105 GYO_1833 13ea6c4983e90567796dbe6be1a651bd 356 Pfam PF02790 Cytochrome C oxidase subunit II, transmembrane domain 47 106 4.3E-7 T 14-10-2018 IPR011759 Cytochrome C oxidase subunit II, transmembrane domain GO:0016021|GO:0022900 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 GYO_0323 0f290ecfae77dcb39d17a7c8ba7bc329 348 Pfam PF04865 Baseplate J-like protein 62 306 8.3E-64 T 14-10-2018 IPR006949 Baseplate protein J-like GYO_0244 0f290ecfae77dcb39d17a7c8ba7bc329 348 Pfam PF04865 Baseplate J-like protein 62 306 8.3E-64 T 14-10-2018 IPR006949 Baseplate protein J-like GYO_1560 cbc844dcd28553799006f076783eb239 198 Pfam PF06114 IrrE N-terminal-like domain 33 147 1.3E-19 T 14-10-2018 IPR010359 IrrE N-terminal-like domain GYO_3746 4fbe9e5c08644e1821b7ecd78a336b63 283 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 98 273 1.6E-20 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 GYO_3746 4fbe9e5c08644e1821b7ecd78a336b63 283 Gene3D G3DSA:1.10.3720.10 4 270 5.1E-62 T 14-10-2018 IPR035906 MetI-like superfamily GYO_3746 4fbe9e5c08644e1821b7ecd78a336b63 283 SUPERFAMILY SSF161098 8 283 3.53E-67 T 14-10-2018 IPR035906 MetI-like superfamily GYO_0407 45513e283e567216bcbbb2b4b43169dc 305 Pfam PF00583 Acetyltransferase (GNAT) family 176 279 3.9E-18 T 14-10-2018 IPR000182 GNAT domain GYO_0407 45513e283e567216bcbbb2b4b43169dc 305 SMART SM00347 28 128 9.8E-11 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 GYO_0407 45513e283e567216bcbbb2b4b43169dc 305 Gene3D G3DSA:3.40.630.30 160 289 1.5E-27 T 14-10-2018 GYO_0407 45513e283e567216bcbbb2b4b43169dc 305 Pfam PF01047 MarR family 36 92 7.1E-16 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 GYO_0407 45513e283e567216bcbbb2b4b43169dc 305 Gene3D G3DSA:1.10.10.10 2 147 3.6E-25 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily GYO_0407 45513e283e567216bcbbb2b4b43169dc 305 SUPERFAMILY SSF55729 152 286 4.49E-27 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase GYO_0407 45513e283e567216bcbbb2b4b43169dc 305 SUPERFAMILY SSF46785 14 144 7.29E-25 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily GYO_1267 23542e3caa8b112ca01e36015af0b4d9 69 ProDom PD056348 YHEE BH1143 1 69 7.0E-34 T 14-10-2018 IPR017263 Uncharacterised conserved protein UCP037692 GYO_1267 23542e3caa8b112ca01e36015af0b4d9 69 Pfam PF17277 Family of unknown function (DUF5342) 1 69 2.2E-33 T 14-10-2018 IPR017263 Uncharacterised conserved protein UCP037692 GYO_1267 23542e3caa8b112ca01e36015af0b4d9 69 PIRSF PIRSF037692 1 69 1.4E-37 T 14-10-2018 IPR017263 Uncharacterised conserved protein UCP037692 GYO_1787 a2d2b65e4c7858beee87fae2738a4c54 221 Pfam PF02254 TrkA-N domain 5 120 1.2E-29 T 14-10-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 GYO_1787 a2d2b65e4c7858beee87fae2738a4c54 221 Pfam PF02080 TrkA-C domain 150 216 1.2E-15 T 14-10-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 GYO_1787 a2d2b65e4c7858beee87fae2738a4c54 221 SUPERFAMILY SSF51735 4 134 4.23E-38 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily GYO_1787 a2d2b65e4c7858beee87fae2738a4c54 221 Gene3D G3DSA:3.40.50.720 1 136 3.0E-38 T 14-10-2018 GYO_1787 a2d2b65e4c7858beee87fae2738a4c54 221 Gene3D G3DSA:3.30.70.1450 137 217 2.9E-28 T 14-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 GYO_1787 a2d2b65e4c7858beee87fae2738a4c54 221 SUPERFAMILY SSF116726 131 215 1.22E-21 T 14-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 GYO_3428 e1bbcfb43e6796366376d93b7708edf8 386 Pfam PF00155 Aminotransferase class I and II 29 376 1.3E-70 T 14-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 GYO_3428 e1bbcfb43e6796366376d93b7708edf8 386 Gene3D G3DSA:3.40.640.10 60 281 1.3E-132 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 GYO_3428 e1bbcfb43e6796366376d93b7708edf8 386 SUPERFAMILY SSF53383 4 384 1.86E-123 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase GYO_3428 e1bbcfb43e6796366376d93b7708edf8 386 Gene3D G3DSA:3.90.1150.10 29 377 1.3E-132 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 GYO_3428 e1bbcfb43e6796366376d93b7708edf8 386 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 231 244 - T 14-10-2018 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 GYO_2690 a48e27dc65ac0372b7c448aff8ec4e8e 448 Pfam PF02601 Exonuclease VII, large subunit 125 438 3.0E-101 T 14-10-2018 IPR020579 Exonuclease VII, large subunit, C-terminal GO:0008855 GYO_2690 a48e27dc65ac0372b7c448aff8ec4e8e 448 TIGRFAM TIGR00237 xseA: exodeoxyribonuclease VII, large subunit 8 358 2.6E-140 T 14-10-2018 IPR003753 Exonuclease VII, large subunit GO:0006308|GO:0008855|GO:0009318 GYO_2690 a48e27dc65ac0372b7c448aff8ec4e8e 448 Pfam PF13742 OB-fold nucleic acid binding domain 8 102 8.2E-31 T 14-10-2018 IPR025824 OB-fold nucleic acid binding domain GO:0003676 GYO_2690 a48e27dc65ac0372b7c448aff8ec4e8e 448 Hamap MF_00378 Exodeoxyribonuclease 7 large subunit [xseA]. 4 441 30.723 T 14-10-2018 IPR003753 Exonuclease VII, large subunit GO:0006308|GO:0008855|GO:0009318 GYO_1786 8cd79c52d9ccec6c0554843fe1264d1f 275 SUPERFAMILY SSF110857 126 252 1.15E-19 T 14-10-2018 IPR036568 Gamma-glutamyl cyclotransferase-like superfamily GYO_1786 8cd79c52d9ccec6c0554843fe1264d1f 275 Pfam PF06094 Gamma-glutamyl cyclotransferase, AIG2-like 5 114 5.5E-19 T 14-10-2018 IPR009288 Gamma-glutamylcyclotransferase, AIG2-like GYO_1786 8cd79c52d9ccec6c0554843fe1264d1f 275 Gene3D G3DSA:3.10.490.10 119 275 2.7E-68 T 14-10-2018 GYO_1786 8cd79c52d9ccec6c0554843fe1264d1f 275 Pfam PF13772 AIG2-like family 185 254 3.3E-9 T 14-10-2018 GYO_1786 8cd79c52d9ccec6c0554843fe1264d1f 275 SUPERFAMILY SSF110857 4 118 2.49E-25 T 14-10-2018 IPR036568 Gamma-glutamyl cyclotransferase-like superfamily GYO_1786 8cd79c52d9ccec6c0554843fe1264d1f 275 Gene3D G3DSA:3.10.490.10 1 117 1.6E-31 T 14-10-2018 GYO_2578 a61352993747b2a3c501cb04e7684e4f 194 Gene3D G3DSA:2.60.480.10 6 83 1.2E-9 T 14-10-2018 IPR038548 Stage V sporulation protein AA, N-terminal domain superfamily GYO_2578 a61352993747b2a3c501cb04e7684e4f 194 Pfam PF12164 Stage V sporulation protein AA 7 76 1.6E-15 T 14-10-2018 IPR021997 Stage V sporulation protein AA GYO_4439 7f790ed96d0222c716c9569b0ac14c89 365 SUPERFAMILY SSF48452 88 260 2.66E-17 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 GYO_4439 7f790ed96d0222c716c9569b0ac14c89 365 Gene3D G3DSA:1.25.40.10 1 365 1.9E-91 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 GYO_4439 7f790ed96d0222c716c9569b0ac14c89 365 Pfam PF13424 Tetratricopeptide repeat 169 237 1.5E-11 T 14-10-2018 GYO_0751 5bfcbc9038e0ca5ce0456470036befc4 136 SUPERFAMILY SSF54909 64 135 4.65E-6 T 14-10-2018 IPR011008 Dimeric alpha-beta barrel GYO_0751 5bfcbc9038e0ca5ce0456470036befc4 136 SUPERFAMILY SSF46785 1 61 1.93E-15 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily GYO_0751 5bfcbc9038e0ca5ce0456470036befc4 136 SMART SM00344 2 109 2.9E-30 T 14-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 GYO_0751 5bfcbc9038e0ca5ce0456470036befc4 136 Pfam PF13412 Winged helix-turn-helix DNA-binding 2 49 6.5E-15 T 14-10-2018 GYO_0751 5bfcbc9038e0ca5ce0456470036befc4 136 Gene3D G3DSA:3.30.70.920 53 136 1.6E-11 T 14-10-2018 GYO_0751 5bfcbc9038e0ca5ce0456470036befc4 136 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 2 18 2.2E-11 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 GYO_0751 5bfcbc9038e0ca5ce0456470036befc4 136 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 18 29 2.2E-11 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 GYO_0751 5bfcbc9038e0ca5ce0456470036befc4 136 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 29 48 2.2E-11 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 GYO_0751 5bfcbc9038e0ca5ce0456470036befc4 136 Pfam PF01037 Lrp/AsnC ligand binding domain 72 135 4.4E-6 T 14-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain GYO_0751 5bfcbc9038e0ca5ce0456470036befc4 136 Gene3D G3DSA:1.10.10.10 1 52 4.8E-20 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily GYO_4021 2c8f40caecd462c36f0213b4f298877d 172 ProDom PD031895 YWNG MEMBRANE TRANSMEMBRANE YWNC 41 128 1.0E-34 T 14-10-2018 IPR035287 Protein of unknown function DUF5362 GYO_4021 2c8f40caecd462c36f0213b4f298877d 172 Pfam PF17319 Family of unknown function (DUF5362) 44 146 4.4E-9 T 14-10-2018 IPR035287 Protein of unknown function DUF5362 GYO_3886 f45aae51f861a5df720f7e57f749c612 160 Pfam PF05130 FlgN protein 1 142 8.5E-28 T 14-10-2018 IPR007809 FlgN-like protein GO:0005515|GO:0044780 GYO_3886 f45aae51f861a5df720f7e57f749c612 160 Gene3D G3DSA:1.20.58.300 2 125 9.4E-9 T 14-10-2018 GYO_3886 f45aae51f861a5df720f7e57f749c612 160 SUPERFAMILY SSF140566 2 130 3.01E-18 T 14-10-2018 IPR036679 FlgN-like superfamily GO:0005515|GO:0044780 GYO_1375 a504660690a1c63e9b1613e611b466f9 77 Pfam PF10803 Spore germination GerPB 1 52 4.4E-29 T 14-10-2018 IPR024255 Spore germination GerPB GYO_1375 a504660690a1c63e9b1613e611b466f9 77 ProDom PD027559 GERMINATION SPORE GERPB PROBABLE PB SPORULATION PB-RELATED 1 68 6.0E-29 T 14-10-2018 IPR024255 Spore germination GerPB GYO_1238 6e096c35454d436d52d68f3f0d762209 154 SUPERFAMILY SSF55729 21 150 2.57E-17 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase GYO_1238 6e096c35454d436d52d68f3f0d762209 154 Gene3D G3DSA:3.40.630.30 12 154 8.3E-22 T 14-10-2018 GYO_1238 6e096c35454d436d52d68f3f0d762209 154 Pfam PF00583 Acetyltransferase (GNAT) family 24 143 8.1E-12 T 14-10-2018 IPR000182 GNAT domain GYO_1859 b464dfdac4eb97b62ea9c5a6e0fe92e1 148 Gene3D G3DSA:2.40.330.20 3 146 2.8E-55 T 14-10-2018 IPR038619 MraZ superfamily GYO_1859 b464dfdac4eb97b62ea9c5a6e0fe92e1 148 SUPERFAMILY SSF89447 5 141 1.78E-53 T 14-10-2018 IPR037914 SpoVT-AbrB domain superfamily GYO_1859 b464dfdac4eb97b62ea9c5a6e0fe92e1 148 Hamap MF_01008 Transcriptional regulator MraZ [mraZ]. 1 148 59.628 T 14-10-2018 IPR003444 Transcriptional regulator MraZ GO:0003700|GO:0006355 GYO_1859 b464dfdac4eb97b62ea9c5a6e0fe92e1 148 Pfam PF02381 MraZ protein, putative antitoxin-like 77 146 5.4E-27 T 14-10-2018 IPR020603 MraZ domain GYO_1859 b464dfdac4eb97b62ea9c5a6e0fe92e1 148 Pfam PF02381 MraZ protein, putative antitoxin-like 6 75 2.3E-25 T 14-10-2018 IPR020603 MraZ domain GYO_1859 b464dfdac4eb97b62ea9c5a6e0fe92e1 148 ProDom PD006745 MRAZ YABB DIVISION CELL 3D-STRUCTURE UNCHARACTERIZED BCR SIMILAR PROTEIN 6 143 6.0E-78 T 14-10-2018 IPR003444 Transcriptional regulator MraZ GO:0003700|GO:0006355 GYO_1859 b464dfdac4eb97b62ea9c5a6e0fe92e1 148 TIGRFAM TIGR00242 TIGR00242: division/cell wall cluster transcriptional repressor MraZ 6 148 6.3E-67 T 14-10-2018 IPR003444 Transcriptional regulator MraZ GO:0003700|GO:0006355 GYO_2928 5456bb13fb02e7da2274ac5c20d6b062 378 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 59 73 - T 14-10-2018 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 GYO_2928 5456bb13fb02e7da2274ac5c20d6b062 378 Gene3D G3DSA:3.90.180.10 4 365 6.8E-130 T 14-10-2018 GYO_2928 5456bb13fb02e7da2274ac5c20d6b062 378 Pfam PF13823 Alcohol dehydrogenase GroES-associated 1 23 3.1E-12 T 14-10-2018 IPR027399 Alcohol dehydrogenase GroES-associated GYO_2928 5456bb13fb02e7da2274ac5c20d6b062 378 Pfam PF00107 Zinc-binding dehydrogenase 189 258 5.4E-8 T 14-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 GYO_2928 5456bb13fb02e7da2274ac5c20d6b062 378 Gene3D G3DSA:3.40.50.720 169 338 6.8E-130 T 14-10-2018 GYO_2928 5456bb13fb02e7da2274ac5c20d6b062 378 SUPERFAMILY SSF50129 1 183 1.26E-59 T 14-10-2018 IPR011032 GroES-like superfamily GYO_2928 5456bb13fb02e7da2274ac5c20d6b062 378 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 26 139 1.4E-28 T 14-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 GYO_2928 5456bb13fb02e7da2274ac5c20d6b062 378 SUPERFAMILY SSF51735 157 340 6.57E-47 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily GYO_3782 071fde732307d353fd88ff9525febaa3 520 Gene3D G3DSA:1.20.1740.10 6 460 2.3E-76 T 14-10-2018 GYO_3782 071fde732307d353fd88ff9525febaa3 520 PIRSF PIRSF006060 428 515 180.0 T 14-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 GYO_3782 071fde732307d353fd88ff9525febaa3 520 PIRSF PIRSF006060 1 452 2.4E-87 T 14-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 GYO_3782 071fde732307d353fd88ff9525febaa3 520 Pfam PF13520 Amino acid permease 12 419 5.4E-46 T 14-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 GYO_0406 d50a145b81e3a97ea01bc1e19db3fe49 82 Pfam PF10852 Protein of unknown function (DUF2651) 7 78 2.7E-25 T 14-10-2018 IPR020258 Uncharacterised protein family YbeF GYO_0406 d50a145b81e3a97ea01bc1e19db3fe49 82 ProDom PD060054 MEMBRANE SPANNING TRANSMEMBRANE YBEF 1 72 2.0E-20 T 14-10-2018 IPR020258 Uncharacterised protein family YbeF GYO_0149 14e49e03395e2b98acecaf07f61ac382 62 SUPERFAMILY SSF54686 1 55 2.09E-23 T 14-10-2018 IPR036920 Ribosomal protein L10e/L16 superfamily GO:0003735|GO:0005840|GO:0006412 GYO_0149 14e49e03395e2b98acecaf07f61ac382 62 Gene3D G3DSA:3.90.1170.10 1 62 1.0E-22 T 14-10-2018 IPR036920 Ribosomal protein L10e/L16 superfamily GO:0003735|GO:0005840|GO:0006412 GYO_0149 14e49e03395e2b98acecaf07f61ac382 62 Pfam PF00252 Ribosomal protein L16p/L10e 1 50 1.6E-20 T 14-10-2018 IPR016180 Ribosomal protein L10e/L16 GO:0003735|GO:0005840|GO:0006412 GYO_1534 c9c2328404bf6e184f097987645cd0e6 324 Pfam PF13536 Putative multidrug resistance efflux transporter 38 305 2.4E-106 T 14-10-2018 IPR032713 Putative multidrug resistance efflux transporter GYO_2428 512de9f892dd081da3255c96f9e5b28a 1193 Pfam PF00350 Dynamin family 615 838 9.5E-40 T 14-10-2018 IPR022812 Dynamin superfamily GYO_2428 512de9f892dd081da3255c96f9e5b28a 1193 Pfam PF00350 Dynamin family 46 200 2.7E-24 T 14-10-2018 IPR022812 Dynamin superfamily GYO_2428 512de9f892dd081da3255c96f9e5b28a 1193 SUPERFAMILY SSF52540 30 255 5.23E-24 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase GYO_2428 512de9f892dd081da3255c96f9e5b28a 1193 SUPERFAMILY SSF52540 599 878 1.0E-29 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase GYO_2428 512de9f892dd081da3255c96f9e5b28a 1193 Gene3D G3DSA:3.40.50.300 46 282 8.0E-35 T 14-10-2018 GYO_2973 8d059f510dbf9cd1c2bd44caaaac6329 211 Hamap MF_00551 Uridine kinase [udk]. 2 206 42.511 T 14-10-2018 IPR026008 Uridine kinase GO:0004849|GO:0005524|GO:0016773 KEGG: 00240+2.7.1.48|KEGG: 00983+2.7.1.48|MetaCyc: PWY-7193 GYO_2973 8d059f510dbf9cd1c2bd44caaaac6329 211 TIGRFAM TIGR00235 udk: uridine kinase 4 206 1.1E-97 T 14-10-2018 IPR000764 Uridine kinase-like KEGG: 00240+2.7.1.48|KEGG: 00983+2.7.1.48|MetaCyc: PWY-7193|Reactome: R-HSA-73614 GYO_2973 8d059f510dbf9cd1c2bd44caaaac6329 211 PRINTS PR00988 Uridine kinase signature 35 46 5.3E-38 T 14-10-2018 GYO_2973 8d059f510dbf9cd1c2bd44caaaac6329 211 PRINTS PR00988 Uridine kinase signature 150 161 5.3E-38 T 14-10-2018 GYO_2973 8d059f510dbf9cd1c2bd44caaaac6329 211 PRINTS PR00988 Uridine kinase signature 5 22 5.3E-38 T 14-10-2018 GYO_2973 8d059f510dbf9cd1c2bd44caaaac6329 211 PRINTS PR00988 Uridine kinase signature 172 185 5.3E-38 T 14-10-2018 GYO_2973 8d059f510dbf9cd1c2bd44caaaac6329 211 PRINTS PR00988 Uridine kinase signature 136 146 5.3E-38 T 14-10-2018 GYO_2973 8d059f510dbf9cd1c2bd44caaaac6329 211 PRINTS PR00988 Uridine kinase signature 80 95 5.3E-38 T 14-10-2018 GYO_2973 8d059f510dbf9cd1c2bd44caaaac6329 211 Gene3D G3DSA:3.40.50.300 2 211 3.1E-66 T 14-10-2018 GYO_2973 8d059f510dbf9cd1c2bd44caaaac6329 211 Pfam PF00485 Phosphoribulokinase / Uridine kinase family 7 192 1.8E-43 T 14-10-2018 IPR006083 Phosphoribulokinase/uridine kinase GO:0005524|GO:0016301 Reactome: R-HSA-73614 GYO_2973 8d059f510dbf9cd1c2bd44caaaac6329 211 SUPERFAMILY SSF52540 3 197 2.39E-50 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase GYO_3088 261fb5de371b9448151545d43777c392 147 SUPERFAMILY SSF54637 15 143 9.39E-33 T 14-10-2018 IPR029069 HotDog domain superfamily GYO_3088 261fb5de371b9448151545d43777c392 147 Pfam PF03061 Thioesterase superfamily 34 114 2.8E-12 T 14-10-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 GYO_3088 261fb5de371b9448151545d43777c392 147 Gene3D G3DSA:3.10.129.10 8 146 3.5E-33 T 14-10-2018 GYO_3610 5d57d31282a2d8f641596c00754b9d02 61 Pfam PF13113 Protein of unknown function (DUF3970) 2 54 2.4E-29 T 14-10-2018 IPR025088 Protein of unknown function DUF3970 GYO_2700 16041841e87ccc8c340b2dd08a1d994c 133 TIGRFAM TIGR02849 spore_III_AD: stage III sporulation protein AD 29 129 3.1E-40 T 14-10-2018 IPR014211 Stage III sporulation protein AD GYO_2700 16041841e87ccc8c340b2dd08a1d994c 133 Pfam PF06686 Stage III sporulation protein AC/AD protein family 5 59 1.8E-13 T 14-10-2018 IPR025664 Stage III sporulation protein AC/AD family GYO_2700 16041841e87ccc8c340b2dd08a1d994c 133 Pfam PF06686 Stage III sporulation protein AC/AD protein family 73 127 7.7E-20 T 14-10-2018 IPR025664 Stage III sporulation protein AC/AD family GYO_1273 91d92915d97fbfc22f3386d80f5ba956 414 SUPERFAMILY SSF48371 82 291 1.51E-49 T 14-10-2018 IPR016024 Armadillo-type fold GYO_1273 91d92915d97fbfc22f3386d80f5ba956 414 Gene3D G3DSA:1.25.40.290 176 291 5.8E-38 T 14-10-2018 GYO_1273 91d92915d97fbfc22f3386d80f5ba956 414 Pfam PF08713 DNA alkylation repair enzyme 107 270 4.2E-8 T 14-10-2018 IPR014825 DNA alkylation repair enzyme GYO_0985 ed4374f856df9b4c7258b5e94148ae10 356 Pfam PF13039 Protein of unknown function (DUF3900) 2 254 9.1E-138 T 14-10-2018 IPR025006 Protein of unknown function DUF3900 GYO_0985 ed4374f856df9b4c7258b5e94148ae10 356 Pfam PF13037 Domain of unknown function (DUF3898) 261 349 1.6E-41 T 14-10-2018 IPR025012 Domain of unknown function DUF3898 GYO_4081 b077c96a98233bc8b2da85d83e025717 565 Gene3D G3DSA:3.40.50.10380 16 271 3.5E-102 T 14-10-2018 IPR037062 Malic enzyme, N-terminal domain superfamily GO:0004471|GO:0055114 GYO_4081 b077c96a98233bc8b2da85d83e025717 565 ProSitePatterns PS00331 Malic enzymes signature. 270 286 - T 14-10-2018 IPR015884 Malic enzyme, conserved site GO:0004471|GO:0055114 GYO_4081 b077c96a98233bc8b2da85d83e025717 565 SMART SM00919 274 534 2.9E-121 T 14-10-2018 IPR012302 Malic enzyme, NAD-binding GO:0051287 GYO_4081 b077c96a98233bc8b2da85d83e025717 565 PRINTS PR00072 Malic enzyme signature 270 286 3.9E-72 T 14-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 GYO_4081 b077c96a98233bc8b2da85d83e025717 565 PRINTS PR00072 Malic enzyme signature 186 208 3.9E-72 T 14-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 GYO_4081 b077c96a98233bc8b2da85d83e025717 565 PRINTS PR00072 Malic enzyme signature 412 428 3.9E-72 T 14-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 GYO_4081 b077c96a98233bc8b2da85d83e025717 565 PRINTS PR00072 Malic enzyme signature 150 179 3.9E-72 T 14-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 GYO_4081 b077c96a98233bc8b2da85d83e025717 565 PRINTS PR00072 Malic enzyme signature 245 263 3.9E-72 T 14-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 GYO_4081 b077c96a98233bc8b2da85d83e025717 565 PRINTS PR00072 Malic enzyme signature 301 317 3.9E-72 T 14-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 GYO_4081 b077c96a98233bc8b2da85d83e025717 565 PRINTS PR00072 Malic enzyme signature 88 112 3.9E-72 T 14-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 GYO_4081 b077c96a98233bc8b2da85d83e025717 565 PIRSF PIRSF000106 1 565 9.5E-231 T 14-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 GYO_4081 b077c96a98233bc8b2da85d83e025717 565 SMART SM01274 82 264 2.3E-91 T 14-10-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 GYO_4081 b077c96a98233bc8b2da85d83e025717 565 Pfam PF00390 Malic enzyme, N-terminal domain 83 264 4.0E-73 T 14-10-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 GYO_4081 b077c96a98233bc8b2da85d83e025717 565 Gene3D G3DSA:3.40.50.720 272 565 1.2E-108 T 14-10-2018 GYO_4081 b077c96a98233bc8b2da85d83e025717 565 SUPERFAMILY SSF53223 5 273 5.97E-102 T 14-10-2018 GYO_4081 b077c96a98233bc8b2da85d83e025717 565 Pfam PF03949 Malic enzyme, NAD binding domain 274 534 6.2E-105 T 14-10-2018 IPR012302 Malic enzyme, NAD-binding GO:0051287 GYO_4081 b077c96a98233bc8b2da85d83e025717 565 SUPERFAMILY SSF51735 274 561 7.88E-92 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily GYO_0600 ffe0f0cffac6b8cb337ae77f5a054f6c 472 Gene3D G3DSA:1.20.1250.20 260 469 9.4E-23 T 14-10-2018 GYO_0600 ffe0f0cffac6b8cb337ae77f5a054f6c 472 PRINTS PR01036 Tetracycline resistance protein TetB signature 268 293 3.2E-7 T 14-10-2018 GYO_0600 ffe0f0cffac6b8cb337ae77f5a054f6c 472 PRINTS PR01036 Tetracycline resistance protein TetB signature 360 380 3.2E-7 T 14-10-2018 GYO_0600 ffe0f0cffac6b8cb337ae77f5a054f6c 472 PRINTS PR01036 Tetracycline resistance protein TetB signature 18 42 3.2E-7 T 14-10-2018 GYO_0600 ffe0f0cffac6b8cb337ae77f5a054f6c 472 PRINTS PR01036 Tetracycline resistance protein TetB signature 78 100 3.2E-7 T 14-10-2018 GYO_0600 ffe0f0cffac6b8cb337ae77f5a054f6c 472 PRINTS PR01036 Tetracycline resistance protein TetB signature 234 252 3.2E-7 T 14-10-2018 GYO_0600 ffe0f0cffac6b8cb337ae77f5a054f6c 472 Gene3D G3DSA:1.20.1720.10 15 238 2.1E-43 T 14-10-2018 GYO_0600 ffe0f0cffac6b8cb337ae77f5a054f6c 472 TIGRFAM TIGR00711 efflux_EmrB: drug resistance MFS transporter, drug:H+ antiporter-2 (14 Spanner) (DHA2) family 17 423 4.5E-107 T 14-10-2018 IPR004638 Drug resistance transporter EmrB/QacA subfamily GO:0016021|GO:0022857|GO:0055085 GYO_0600 ffe0f0cffac6b8cb337ae77f5a054f6c 472 Pfam PF07690 Major Facilitator Superfamily 20 410 4.6E-51 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 GYO_0600 ffe0f0cffac6b8cb337ae77f5a054f6c 472 SUPERFAMILY SSF103473 9 467 1.02E-64 T 14-10-2018 IPR036259 MFS transporter superfamily GYO_1968 1004cba54a4b7744af9948257811dd5b 304 Gene3D G3DSA:1.10.443.10 112 294 2.4E-62 T 14-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 GYO_1968 1004cba54a4b7744af9948257811dd5b 304 Gene3D G3DSA:1.10.150.130 5 100 6.7E-22 T 14-10-2018 IPR010998 Integrase/recombinase, N-terminal GYO_1968 1004cba54a4b7744af9948257811dd5b 304 SUPERFAMILY SSF56349 6 294 4.12E-58 T 14-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 GYO_1968 1004cba54a4b7744af9948257811dd5b 304 Pfam PF02899 Phage integrase, N-terminal SAM-like domain 9 91 5.0E-23 T 14-10-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 GYO_1968 1004cba54a4b7744af9948257811dd5b 304 Hamap MF_01808 Tyrosine recombinase XerC [xerC]. 6 300 54.151 T 14-10-2018 IPR023009 Tyrosine recombinase XerC/XerD GYO_1968 1004cba54a4b7744af9948257811dd5b 304 Pfam PF00589 Phage integrase family 112 286 2.2E-56 T 14-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 GYO_1968 1004cba54a4b7744af9948257811dd5b 304 TIGRFAM TIGR02224 recomb_XerC: tyrosine recombinase XerC 10 301 9.0E-112 T 14-10-2018 IPR011931 Tyrosine recombinase XerC GO:0003677|GO:0006310|GO:0007059|GO:0015074|GO:0051301 GYO_0837 c5a8df548bd133e42471154a77d7ac1a 188 Pfam PF07563 Protein of unknown function (DUF1541) 131 182 4.0E-27 T 14-10-2018 IPR011438 Domain of unknown function DUF1541 GYO_0837 c5a8df548bd133e42471154a77d7ac1a 188 Pfam PF07563 Protein of unknown function (DUF1541) 67 118 1.6E-26 T 14-10-2018 IPR011438 Domain of unknown function DUF1541 GYO_0837 c5a8df548bd133e42471154a77d7ac1a 188 Gene3D G3DSA:2.30.30.1210 42 188 1.3E-69 T 14-10-2018 GYO_0397 b263d5b27b8b2cee922d3942601f8030 69 ProDom PD053503 YBXH ORF3 7 69 4.0E-23 T 14-10-2018 IPR035314 Protein of unknown function DUF5370 GYO_0397 b263d5b27b8b2cee922d3942601f8030 69 Pfam PF17340 Family of unknown function (DUF5370) 7 69 6.5E-36 T 14-10-2018 IPR035314 Protein of unknown function DUF5370 GYO_3476 482f30b7a6dea5a8089ce09d24f40633 159 Pfam PF17355 Family of unknown function (DUF5383) 30 154 1.0E-42 T 14-10-2018 IPR020212 ESX secretion system protein YueC GYO_3476 482f30b7a6dea5a8089ce09d24f40633 159 ProDom PD090911 YUEC MEMBRANE TRANSMEMBRANE 9 157 6.0E-70 T 14-10-2018 IPR020212 ESX secretion system protein YueC GYO_3476 482f30b7a6dea5a8089ce09d24f40633 159 TIGRFAM TIGR03927 T7SS_EssA_Firm: type VII secretion protein EssA 6 152 4.1E-48 T 14-10-2018 IPR018920 ESAT-6 secretion machinery protein EssA/YueC GYO_0863 0a819ea1e959210b4216c1e6474ff2e7 251 Pfam PF00902 Sec-independent protein translocase protein (TatC) 10 218 3.9E-60 T 14-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 GYO_0863 0a819ea1e959210b4216c1e6474ff2e7 251 ProSitePatterns PS01218 TatC family signature. 151 170 - T 14-10-2018 IPR019820 Sec-independent periplasmic protein translocase, conserved site GYO_0863 0a819ea1e959210b4216c1e6474ff2e7 251 TIGRFAM TIGR00945 tatC: twin arginine-targeting protein translocase TatC 8 223 2.7E-75 T 14-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 GYO_0863 0a819ea1e959210b4216c1e6474ff2e7 251 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 7 34 3.2E-43 T 14-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 GYO_0863 0a819ea1e959210b4216c1e6474ff2e7 251 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 151 179 3.2E-43 T 14-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 GYO_0863 0a819ea1e959210b4216c1e6474ff2e7 251 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 81 99 3.2E-43 T 14-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 GYO_0863 0a819ea1e959210b4216c1e6474ff2e7 251 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 99 125 3.2E-43 T 14-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 GYO_0863 0a819ea1e959210b4216c1e6474ff2e7 251 Hamap MF_00902 Sec-independent protein translocase protein TatC [tatC]. 5 239 16.552 T 14-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 GYO_0210 531cb2f42c86f99fefba8a40a2a43119 348 Gene3D G3DSA:3.20.20.70 1 347 2.5E-114 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 GYO_0210 531cb2f42c86f99fefba8a40a2a43119 348 SUPERFAMILY SSF51395 2 345 3.95E-106 T 14-10-2018 GYO_0210 531cb2f42c86f99fefba8a40a2a43119 348 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 6 325 3.8E-75 T 14-10-2018 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 GYO_0289 531cb2f42c86f99fefba8a40a2a43119 348 Gene3D G3DSA:3.20.20.70 1 347 2.5E-114 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 GYO_0289 531cb2f42c86f99fefba8a40a2a43119 348 SUPERFAMILY SSF51395 2 345 3.95E-106 T 14-10-2018 GYO_0289 531cb2f42c86f99fefba8a40a2a43119 348 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 6 325 3.8E-75 T 14-10-2018 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 GYO_0049 5cf70a12a51f64ebc5ecf643761d657e 407 SMART SM01208 208 286 1.9E-27 T 14-10-2018 IPR011098 G5 domain GYO_0049 5cf70a12a51f64ebc5ecf643761d657e 407 SUPERFAMILY SSF50685 347 394 1.43E-8 T 14-10-2018 IPR036908 RlpA-like domain superfamily GYO_0049 5cf70a12a51f64ebc5ecf643761d657e 407 Pfam PF06725 3D domain 346 407 1.5E-22 T 14-10-2018 IPR010611 3D domain GO:0004553|GO:0009254|GO:0019867 GYO_0049 5cf70a12a51f64ebc5ecf643761d657e 407 Pfam PF07501 G5 domain 213 285 2.6E-20 T 14-10-2018 IPR011098 G5 domain GYO_0049 5cf70a12a51f64ebc5ecf643761d657e 407 Pfam PF03990 Domain of unknown function (DUF348) 40 78 2.6E-11 T 14-10-2018 IPR007137 Resuscitation-promoting factor, domain of unknown function DUF348 GYO_0049 5cf70a12a51f64ebc5ecf643761d657e 407 Pfam PF03990 Domain of unknown function (DUF348) 97 137 2.2E-12 T 14-10-2018 IPR007137 Resuscitation-promoting factor, domain of unknown function DUF348 GYO_0049 5cf70a12a51f64ebc5ecf643761d657e 407 Pfam PF03990 Domain of unknown function (DUF348) 154 194 2.3E-14 T 14-10-2018 IPR007137 Resuscitation-promoting factor, domain of unknown function DUF348 GYO_0049 5cf70a12a51f64ebc5ecf643761d657e 407 Gene3D G3DSA:2.20.230.10 209 286 9.6E-18 T 14-10-2018 GYO_0682 c18c5680df911697be163952ad5897f8 199 Gene3D G3DSA:1.20.1540.10 9 198 6.3E-41 T 14-10-2018 IPR035952 Rhomboid-like superfamily GYO_0682 c18c5680df911697be163952ad5897f8 199 Pfam PF01694 Rhomboid family 54 195 1.3E-39 T 14-10-2018 IPR022764 Peptidase S54, rhomboid domain GO:0004252|GO:0016021 GYO_0682 c18c5680df911697be163952ad5897f8 199 SUPERFAMILY SSF144091 12 195 1.03E-40 T 14-10-2018 GYO_2735 736f6206c00b851f268b1d9b9901b91e 356 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 204 218 - T 14-10-2018 IPR001482 Type II/IV secretion system protein GYO_2735 736f6206c00b851f268b1d9b9901b91e 356 Pfam PF00437 Type II/IV secretion system protein 14 275 1.8E-79 T 14-10-2018 IPR001482 Type II/IV secretion system protein GYO_2735 736f6206c00b851f268b1d9b9901b91e 356 SMART SM00382 136 262 3.9E-4 T 14-10-2018 IPR003593 AAA+ ATPase domain GYO_2735 736f6206c00b851f268b1d9b9901b91e 356 Gene3D G3DSA:3.30.450.90 2 110 5.0E-28 T 14-10-2018 GYO_2735 736f6206c00b851f268b1d9b9901b91e 356 SUPERFAMILY SSF52540 4 305 2.02E-69 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase GYO_2735 736f6206c00b851f268b1d9b9901b91e 356 Gene3D G3DSA:3.40.50.300 111 353 4.4E-65 T 14-10-2018 GYO_3575 1a163b5ee45d443c690245ec6526b6e0 222 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 36 222 8.0E-23 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 GYO_3575 1a163b5ee45d443c690245ec6526b6e0 222 SUPERFAMILY SSF161098 13 208 1.44E-45 T 14-10-2018 IPR035906 MetI-like superfamily GYO_3575 1a163b5ee45d443c690245ec6526b6e0 222 Gene3D G3DSA:1.10.3720.10 9 221 8.0E-48 T 14-10-2018 IPR035906 MetI-like superfamily GYO_0581 26869a8957c17beb918fe7c80410338a 148 Gene3D G3DSA:2.30.110.10 9 96 2.5E-5 T 14-10-2018 IPR012349 FMN-binding split barrel GO:0048037 GYO_0581 26869a8957c17beb918fe7c80410338a 148 Pfam PF01243 Pyridoxamine 5'-phosphate oxidase 18 87 3.0E-4 T 14-10-2018 IPR011576 Pyridoxamine 5'-phosphate oxidase, putative KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 GYO_0581 26869a8957c17beb918fe7c80410338a 148 SUPERFAMILY SSF50475 18 107 2.75E-7 T 14-10-2018 GYO_4175 734084c6bb049768c393504707c8c0b4 289 SUPERFAMILY SSF55729 93 281 6.52E-24 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase GYO_4175 734084c6bb049768c393504707c8c0b4 289 Gene3D G3DSA:3.40.630.30 36 281 2.8E-40 T 14-10-2018 GYO_4175 734084c6bb049768c393504707c8c0b4 289 Pfam PF00583 Acetyltransferase (GNAT) family 157 271 4.0E-14 T 14-10-2018 IPR000182 GNAT domain GYO_1977 7ecee22607e377047aeec28a0e3d4bd0 250 Pfam PF02108 Flagellar assembly protein FliH 110 236 1.4E-15 T 14-10-2018 IPR018035 Flagellar assembly protein FliH/Type III secretion system HrpE GYO_1977 7ecee22607e377047aeec28a0e3d4bd0 250 TIGRFAM TIGR03825 FliH_bacil: flagellar assembly protein FliH 1 248 1.4E-84 T 14-10-2018 IPR022524 Flagellar assembly FliH, Bacilli GYO_0876 3e67aa88f9485073fd3f86796f3cb4da 255 Pfam PF04536 TPM domain 36 149 6.4E-23 T 14-10-2018 IPR007621 TPM domain GYO_0876 3e67aa88f9485073fd3f86796f3cb4da 255 Gene3D G3DSA:3.10.310.50 23 158 1.1E-21 T 14-10-2018 GYO_1673 fa24926048527a91a37a05eeab8b1168 233 Pfam PF08876 Domain of unknown function (DUF1836) 45 158 1.9E-19 T 14-10-2018 IPR014975 Protein of unknown function DUF1836 GYO_0050 0920ddfda40724e03c35ba75ea3f029a 186 Pfam PF13331 Domain of unknown function (DUF4093) 93 176 2.5E-27 T 14-10-2018 IPR025156 Ribonuclease M5, C-terminal domain GYO_0050 0920ddfda40724e03c35ba75ea3f029a 186 SUPERFAMILY SSF110455 1 115 1.05E-35 T 14-10-2018 GYO_0050 0920ddfda40724e03c35ba75ea3f029a 186 Hamap MF_01469 Ribonuclease M5 [rnmV]. 3 178 32.235 T 14-10-2018 IPR004466 Ribonuclease M5 GO:0043822 GYO_0050 0920ddfda40724e03c35ba75ea3f029a 186 Gene3D G3DSA:3.40.1360.20 1 130 2.4E-25 T 14-10-2018 GYO_0050 0920ddfda40724e03c35ba75ea3f029a 186 Pfam PF13662 Toprim domain 4 71 1.6E-6 T 14-10-2018 IPR006171 TOPRIM domain GYO_0050 0920ddfda40724e03c35ba75ea3f029a 186 TIGRFAM TIGR00334 5S_RNA_mat_M5: ribonuclease M5 2 177 8.4E-79 T 14-10-2018 IPR004466 Ribonuclease M5 GO:0043822 GYO_0050 0920ddfda40724e03c35ba75ea3f029a 186 SMART SM00493 4 77 3.8E-9 T 14-10-2018 IPR006171 TOPRIM domain GYO_1549 11251c7afb8b9ab9f14403c615c99d7f 254 Pfam PF01925 Sulfite exporter TauE/SafE 6 253 3.1E-47 T 14-10-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 GYO_0455 a5de73fe589ae5bdb839a2b3a1e8617d 310 SUPERFAMILY SSF47384 68 151 6.47E-18 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 GYO_0455 a5de73fe589ae5bdb839a2b3a1e8617d 310 SUPERFAMILY SSF55874 140 307 1.14E-36 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily GYO_0455 a5de73fe589ae5bdb839a2b3a1e8617d 310 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 198 306 1.1E-22 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase GYO_0455 a5de73fe589ae5bdb839a2b3a1e8617d 310 Gene3D G3DSA:1.10.287.130 78 151 8.2E-18 T 14-10-2018 GYO_0455 a5de73fe589ae5bdb839a2b3a1e8617d 310 SMART SM00388 84 151 3.4E-18 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 GYO_0455 a5de73fe589ae5bdb839a2b3a1e8617d 310 Pfam PF00512 His Kinase A (phospho-acceptor) domain 84 150 8.4E-15 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 GYO_0455 a5de73fe589ae5bdb839a2b3a1e8617d 310 Gene3D G3DSA:3.30.565.10 158 309 5.5E-37 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily GYO_0455 a5de73fe589ae5bdb839a2b3a1e8617d 310 SMART SM00387 197 309 2.5E-30 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase GYO_0455 a5de73fe589ae5bdb839a2b3a1e8617d 310 PRINTS PR00344 Bacterial sensor protein C-terminal signature 252 262 4.3E-12 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 GYO_0455 a5de73fe589ae5bdb839a2b3a1e8617d 310 PRINTS PR00344 Bacterial sensor protein C-terminal signature 269 287 4.3E-12 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 GYO_0455 a5de73fe589ae5bdb839a2b3a1e8617d 310 PRINTS PR00344 Bacterial sensor protein C-terminal signature 234 248 4.3E-12 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 GYO_0455 a5de73fe589ae5bdb839a2b3a1e8617d 310 PRINTS PR00344 Bacterial sensor protein C-terminal signature 293 306 4.3E-12 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 GYO_1127 a2796920e625364f2f7844f89b4fb3aa 288 PRINTS PR00412 Epoxide hydrolase signature 33 51 8.0E-25 T 14-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 GYO_1127 a2796920e625364f2f7844f89b4fb3aa 288 PRINTS PR00412 Epoxide hydrolase signature 260 282 8.0E-25 T 14-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 GYO_1127 a2796920e625364f2f7844f89b4fb3aa 288 PRINTS PR00412 Epoxide hydrolase signature 99 112 8.0E-25 T 14-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 GYO_1127 a2796920e625364f2f7844f89b4fb3aa 288 PRINTS PR00412 Epoxide hydrolase signature 53 68 8.0E-25 T 14-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 GYO_1127 a2796920e625364f2f7844f89b4fb3aa 288 PRINTS PR00412 Epoxide hydrolase signature 113 126 8.0E-25 T 14-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 GYO_1127 a2796920e625364f2f7844f89b4fb3aa 288 PRINTS PR00111 Alpha/beta hydrolase fold signature 229 243 2.7E-8 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 GYO_1127 a2796920e625364f2f7844f89b4fb3aa 288 PRINTS PR00111 Alpha/beta hydrolase fold signature 99 112 2.7E-8 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 GYO_1127 a2796920e625364f2f7844f89b4fb3aa 288 PRINTS PR00111 Alpha/beta hydrolase fold signature 53 68 2.7E-8 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 GYO_1127 a2796920e625364f2f7844f89b4fb3aa 288 SUPERFAMILY SSF53474 4 283 5.17E-73 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold GYO_1127 a2796920e625364f2f7844f89b4fb3aa 288 Pfam PF00561 alpha/beta hydrolase fold 28 272 6.4E-26 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 GYO_1127 a2796920e625364f2f7844f89b4fb3aa 288 Gene3D G3DSA:3.40.50.1820 3 284 8.9E-84 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold GYO_3086 c0acc0792f919ad481b626bc9c6788b4 146 PRINTS PR00598 Bacterial regulatory protein MarR family signature 70 85 1.5E-7 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 GYO_3086 c0acc0792f919ad481b626bc9c6788b4 146 PRINTS PR00598 Bacterial regulatory protein MarR family signature 119 139 1.5E-7 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 GYO_3086 c0acc0792f919ad481b626bc9c6788b4 146 PRINTS PR00598 Bacterial regulatory protein MarR family signature 89 105 1.5E-7 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 GYO_3086 c0acc0792f919ad481b626bc9c6788b4 146 SMART SM00347 29 129 2.8E-23 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 GYO_3086 c0acc0792f919ad481b626bc9c6788b4 146 SUPERFAMILY SSF46785 12 143 7.87E-31 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily GYO_3086 c0acc0792f919ad481b626bc9c6788b4 146 Gene3D G3DSA:1.10.10.10 3 145 2.2E-36 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily GYO_3086 c0acc0792f919ad481b626bc9c6788b4 146 Pfam PF01047 MarR family 36 94 3.3E-17 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 GYO_1111 14c08b0bf5c3ab3a5f7ffd95265eef54 856 Pfam PF03706 Lysylphosphatidylglycerol synthase TM region 43 295 1.4E-9 T 14-10-2018 IPR022791 Lysylphosphatidylglycerol synthetase/glycosyltransferase AglD GYO_1111 14c08b0bf5c3ab3a5f7ffd95265eef54 856 SUPERFAMILY SSF55729 652 830 2.25E-11 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase GYO_1111 14c08b0bf5c3ab3a5f7ffd95265eef54 856 Pfam PF09924 Uncharacterised conserved protein (DUF2156) 541 831 4.4E-96 T 14-10-2018 IPR024320 Phosphatidylglycerol lysyltransferase, C-terminal GYO_0569 a425ae4f5e1e82b9889dcb488f81be6b 444 Pfam PF00392 Bacterial regulatory proteins, gntR family 8 66 7.4E-11 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 GYO_0569 a425ae4f5e1e82b9889dcb488f81be6b 444 SMART SM00345 7 66 1.1E-18 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 GYO_0569 a425ae4f5e1e82b9889dcb488f81be6b 444 Pfam PF00155 Aminotransferase class I and II 97 438 1.5E-21 T 14-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 GYO_0569 a425ae4f5e1e82b9889dcb488f81be6b 444 SUPERFAMILY SSF46785 3 70 4.07E-16 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily GYO_0569 a425ae4f5e1e82b9889dcb488f81be6b 444 Gene3D G3DSA:3.40.640.10 69 438 5.1E-88 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 GYO_0569 a425ae4f5e1e82b9889dcb488f81be6b 444 Gene3D G3DSA:1.10.10.10 2 68 3.0E-18 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily GYO_0569 a425ae4f5e1e82b9889dcb488f81be6b 444 SUPERFAMILY SSF53383 62 441 1.84E-70 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase GYO_4239 03f94f94b3210c22c8ad42faeddd10b2 280 SUPERFAMILY SSF63520 172 273 1.29E-26 T 14-10-2018 IPR036634 PRD domain superfamily GO:0006355 GYO_4239 03f94f94b3210c22c8ad42faeddd10b2 280 Gene3D G3DSA:1.10.1790.10 168 276 8.9E-28 T 14-10-2018 GYO_4239 03f94f94b3210c22c8ad42faeddd10b2 280 Pfam PF00874 PRD domain 181 272 1.4E-22 T 14-10-2018 IPR011608 PRD domain GO:0006355 GYO_4239 03f94f94b3210c22c8ad42faeddd10b2 280 Pfam PF00874 PRD domain 74 161 2.1E-27 T 14-10-2018 IPR011608 PRD domain GO:0006355 GYO_4239 03f94f94b3210c22c8ad42faeddd10b2 280 SMART SM01061 1 58 2.8E-24 T 14-10-2018 IPR004341 CAT RNA-binding domain GO:0003723 GYO_4239 03f94f94b3210c22c8ad42faeddd10b2 280 Pfam PF03123 CAT RNA binding domain 1 53 3.4E-20 T 14-10-2018 IPR004341 CAT RNA-binding domain GO:0003723 GYO_4239 03f94f94b3210c22c8ad42faeddd10b2 280 ProSitePatterns PS00654 PRD domain signature. 97 109 - T 14-10-2018 IPR001550 Transcription antiterminator, conserved site GO:0003723|GO:0045893 GYO_4239 03f94f94b3210c22c8ad42faeddd10b2 280 Gene3D G3DSA:2.30.24.10 1 55 6.3E-25 T 14-10-2018 IPR036650 CAT RNA-binding domain superfamily GO:0003723 GYO_4239 03f94f94b3210c22c8ad42faeddd10b2 280 Gene3D G3DSA:1.10.1790.10 64 165 3.0E-35 T 14-10-2018 GYO_4239 03f94f94b3210c22c8ad42faeddd10b2 280 SUPERFAMILY SSF50151 1 52 4.58E-16 T 14-10-2018 IPR036650 CAT RNA-binding domain superfamily GO:0003723 GYO_4239 03f94f94b3210c22c8ad42faeddd10b2 280 SUPERFAMILY SSF63520 57 165 1.83E-33 T 14-10-2018 IPR036634 PRD domain superfamily GO:0006355 GYO_3584 3ac543094cc1ca45abd6505b4c369e52 594 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 252 415 2.8E-34 T 14-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 GYO_3584 3ac543094cc1ca45abd6505b4c369e52 594 Gene3D G3DSA:1.20.140.10 423 594 5.1E-54 T 14-10-2018 GYO_3584 3ac543094cc1ca45abd6505b4c369e52 594 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 378 397 - T 14-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 GYO_3584 3ac543094cc1ca45abd6505b4c369e52 594 Gene3D G3DSA:1.20.140.10 252 422 1.9E-49 T 14-10-2018 GYO_3584 3ac543094cc1ca45abd6505b4c369e52 594 SUPERFAMILY SSF56645 22 263 3.53E-73 T 14-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 GYO_3584 3ac543094cc1ca45abd6505b4c369e52 594 SUPERFAMILY SSF47203 257 422 9.83E-43 T 14-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 GYO_3584 3ac543094cc1ca45abd6505b4c369e52 594 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 147 239 1.7E-21 T 14-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 GYO_3584 3ac543094cc1ca45abd6505b4c369e52 594 Gene3D G3DSA:1.10.540.10 1 145 4.3E-43 T 14-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 GYO_3584 3ac543094cc1ca45abd6505b4c369e52 594 ProSitePatterns PS00072 Acyl-CoA dehydrogenases signature 1. 149 161 - T 14-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 GYO_3584 3ac543094cc1ca45abd6505b4c369e52 594 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 31 143 4.4E-29 T 14-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 GYO_3584 3ac543094cc1ca45abd6505b4c369e52 594 Gene3D G3DSA:2.40.110.10 146 251 1.7E-34 T 14-10-2018 GYO_3805 9c6ac10a4c1315272c4ca3651b0011b7 356 Gene3D G3DSA:3.30.565.10 165 345 2.2E-34 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily GYO_3805 9c6ac10a4c1315272c4ca3651b0011b7 356 PRINTS PR00344 Bacterial sensor protein C-terminal signature 293 303 1.2E-9 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 GYO_3805 9c6ac10a4c1315272c4ca3651b0011b7 356 PRINTS PR00344 Bacterial sensor protein C-terminal signature 333 346 1.2E-9 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 GYO_3805 9c6ac10a4c1315272c4ca3651b0011b7 356 PRINTS PR00344 Bacterial sensor protein C-terminal signature 309 327 1.2E-9 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 GYO_3805 9c6ac10a4c1315272c4ca3651b0011b7 356 PRINTS PR00344 Bacterial sensor protein C-terminal signature 275 289 1.2E-9 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 GYO_3805 9c6ac10a4c1315272c4ca3651b0011b7 356 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 237 346 1.2E-20 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase GYO_3805 9c6ac10a4c1315272c4ca3651b0011b7 356 SMART SM00387 236 349 2.1E-27 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase GYO_3805 9c6ac10a4c1315272c4ca3651b0011b7 356 SUPERFAMILY SSF55874 181 345 6.16E-34 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily GYO_4092 ee2c00cc99c14b4025b3460254886083 173 Gene3D G3DSA:3.40.50.10490 1 173 6.8E-57 T 14-10-2018 GYO_4092 ee2c00cc99c14b4025b3460254886083 173 SUPERFAMILY SSF53697 2 165 3.16E-5 T 14-10-2018 GYO_4092 ee2c00cc99c14b4025b3460254886083 173 Pfam PF10740 Domain of unknown function (DUF2529) 1 169 2.7E-66 T 14-10-2018 IPR019676 Domain of unknown function (DUF2529) GYO_1675 cd97c2addba40a8b55c7c4f12a73c5fb 449 Pfam PF02386 Cation transport protein 23 427 6.7E-60 T 14-10-2018 IPR003445 Cation transporter GO:0006812|GO:0008324|GO:0055085 GYO_1405 3bf4b4cd11ef157625f532b4b2a5fbe8 285 Gene3D G3DSA:3.40.630.90 147 285 5.6E-6 T 14-10-2018 GYO_1405 3bf4b4cd11ef157625f532b4b2a5fbe8 285 Gene3D G3DSA:3.40.630.30 1 132 9.3E-13 T 14-10-2018 GYO_1405 3bf4b4cd11ef157625f532b4b2a5fbe8 285 SUPERFAMILY SSF55729 9 263 1.66E-23 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase GYO_1405 3bf4b4cd11ef157625f532b4b2a5fbe8 285 Pfam PF13673 Acetyltransferase (GNAT) domain 43 137 2.2E-10 T 14-10-2018 IPR000182 GNAT domain GYO_4020 8217f0efec2b8812785d045727e77cb9 165 SUPERFAMILY SSF55729 2 164 5.72E-36 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase GYO_4020 8217f0efec2b8812785d045727e77cb9 165 Gene3D G3DSA:3.40.630.30 2 165 6.6E-50 T 14-10-2018 GYO_4020 8217f0efec2b8812785d045727e77cb9 165 Pfam PF00583 Acetyltransferase (GNAT) family 33 138 1.2E-16 T 14-10-2018 IPR000182 GNAT domain GYO_0387 7a86dcd48bc615ec5cf62e48c3477582 325 Gene3D G3DSA:3.40.50.1820 47 323 5.0E-29 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold GYO_0387 7a86dcd48bc615ec5cf62e48c3477582 325 Pfam PF00561 alpha/beta hydrolase fold 94 166 3.4E-6 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 GYO_0387 7a86dcd48bc615ec5cf62e48c3477582 325 SUPERFAMILY SSF53474 45 324 7.03E-21 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold GYO_4415 d54bc82507379664d675d0e0b0508019 410 Pfam PF02661 Fic/DOC family 153 250 1.9E-14 T 14-10-2018 IPR003812 Fido domain GYO_4415 d54bc82507379664d675d0e0b0508019 410 SUPERFAMILY SSF46785 341 393 4.21E-5 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily GYO_4415 d54bc82507379664d675d0e0b0508019 410 Gene3D G3DSA:1.10.3290.10 69 320 5.5E-36 T 14-10-2018 IPR036597 Fido-like domain superfamily GYO_4415 d54bc82507379664d675d0e0b0508019 410 SUPERFAMILY SSF140931 173 320 1.57E-21 T 14-10-2018 IPR036597 Fido-like domain superfamily GYO_2637 a5ae8bd8cd32d1704abb2da7a15a954d 509 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 191 202 3.4E-5 T 14-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 GYO_2637 a5ae8bd8cd32d1704abb2da7a15a954d 509 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 92 106 3.4E-5 T 14-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 GYO_2637 a5ae8bd8cd32d1704abb2da7a15a954d 509 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 126 144 3.4E-5 T 14-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 GYO_2637 a5ae8bd8cd32d1704abb2da7a15a954d 509 Pfam PF01039 Carboxyl transferase domain 28 507 5.5E-188 T 14-10-2018 IPR034733 Acetyl-CoA carboxylase MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722|Reactome: R-HSA-196780 GYO_2637 a5ae8bd8cd32d1704abb2da7a15a954d 509 Gene3D G3DSA:3.90.226.10 255 509 2.4E-88 T 14-10-2018 GYO_2637 a5ae8bd8cd32d1704abb2da7a15a954d 509 SUPERFAMILY SSF52096 243 509 1.14E-81 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily GYO_2637 a5ae8bd8cd32d1704abb2da7a15a954d 509 Gene3D G3DSA:3.90.226.10 1 254 1.6E-87 T 14-10-2018 GYO_2637 a5ae8bd8cd32d1704abb2da7a15a954d 509 SUPERFAMILY SSF52096 3 247 6.8E-74 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily GYO_2431 4866921c2d5371767f05fe8b5071a521 438 Pfam PF00860 Permease family 7 385 1.2E-126 T 14-10-2018 IPR006043 Xanthine/uracil/vitamin C permease GO:0016020|GO:0022857|GO:0055085 GYO_2431 4866921c2d5371767f05fe8b5071a521 438 TIGRFAM TIGR00801 ncs2: uracil-xanthine permease 5 415 2.8E-147 T 14-10-2018 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 Reactome: R-HSA-196836 GYO_2431 4866921c2d5371767f05fe8b5071a521 438 ProSitePatterns PS01116 Xanthine/uracil permeases family signature. 332 352 - T 14-10-2018 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 Reactome: R-HSA-196836 GYO_2431 4866921c2d5371767f05fe8b5071a521 438 TIGRFAM TIGR03173 pbuX: xanthine permease 11 417 1.6E-165 T 14-10-2018 IPR017588 Uric acid permease UacT-like GO:0016021|GO:0022857|GO:0055085 GYO_3144 b2bbf2db3bbd821875917ba6d6058803 260 Gene3D G3DSA:1.20.120.1600 16 128 5.2E-46 T 14-10-2018 GYO_3144 b2bbf2db3bbd821875917ba6d6058803 260 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 134 225 7.0E-13 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 GYO_3144 b2bbf2db3bbd821875917ba6d6058803 260 SUPERFAMILY SSF56784 1 259 2.36E-41 T 14-10-2018 IPR036412 HAD-like superfamily GYO_3144 b2bbf2db3bbd821875917ba6d6058803 260 Pfam PF13419 Haloacid dehalogenase-like hydrolase 4 231 9.5E-22 T 14-10-2018 GYO_3144 b2bbf2db3bbd821875917ba6d6058803 260 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 120 231 7.3E-9 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 GYO_3144 b2bbf2db3bbd821875917ba6d6058803 260 Gene3D G3DSA:3.40.50.1000 2 251 5.2E-46 T 14-10-2018 IPR023214 HAD superfamily GYO_3549 af507db132d6bd0b293adeb9842ae6b3 330 Gene3D G3DSA:3.40.50.720 184 329 5.5E-51 T 14-10-2018 GYO_3549 af507db132d6bd0b293adeb9842ae6b3 330 Pfam PF13478 XdhC Rossmann domain 185 320 2.9E-29 T 14-10-2018 IPR027051 XdhC Rossmann domain GYO_3549 af507db132d6bd0b293adeb9842ae6b3 330 Pfam PF02625 XdhC and CoxI family 12 67 5.2E-16 T 14-10-2018 IPR003777 XdhC- CoxI GYO_0020 063d85fac01ee7bbd0645d8606dad232 207 PIRSF PIRSF000705 1 207 8.7E-60 T 14-10-2018 IPR002624 Deoxynucleoside kinase GO:0005524|GO:0006139|GO:0019206 GYO_0020 063d85fac01ee7bbd0645d8606dad232 207 SUPERFAMILY SSF52540 1 204 5.6E-47 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase GYO_0020 063d85fac01ee7bbd0645d8606dad232 207 Pfam PF01712 Deoxynucleoside kinase 7 206 2.7E-61 T 14-10-2018 IPR031314 Deoxynucleoside kinase domain GYO_0020 063d85fac01ee7bbd0645d8606dad232 207 Gene3D G3DSA:3.40.50.300 5 207 1.8E-49 T 14-10-2018 GYO_3029 c4696bad4c9efb4f7c935c44f7db80b5 180 SUPERFAMILY SSF75500 76 179 1.15E-35 T 14-10-2018 IPR035922 3H domain superfamily GYO_3029 c4696bad4c9efb4f7c935c44f7db80b5 180 Gene3D G3DSA:3.30.1340.20 74 180 5.1E-35 T 14-10-2018 IPR035922 3H domain superfamily GYO_3029 c4696bad4c9efb4f7c935c44f7db80b5 180 PIRSF PIRSF037847 7 180 9.7E-69 T 14-10-2018 IPR026043 Transcription repressor NadR GYO_3029 c4696bad4c9efb4f7c935c44f7db80b5 180 Pfam PF02829 3H domain 81 177 1.3E-32 T 14-10-2018 IPR004173 3H domain GO:0036094 GYO_3029 c4696bad4c9efb4f7c935c44f7db80b5 180 SUPERFAMILY SSF46785 8 68 4.73E-9 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily GYO_3029 c4696bad4c9efb4f7c935c44f7db80b5 180 Pfam PF08279 HTH domain 12 64 9.7E-15 T 14-10-2018 IPR013196 Helix-turn-helix, type 11 GYO_3029 c4696bad4c9efb4f7c935c44f7db80b5 180 ProDom PD469575 TRANSCRIPTION DNA-BINDING REGULATION TRANSCRIPTIONAL REGULATOR REPRESSOR FAMILY BIOTIN REGULATOR 3H 85 175 2.0E-46 T 14-10-2018 IPR004173 3H domain GO:0036094 GYO_3029 c4696bad4c9efb4f7c935c44f7db80b5 180 Gene3D G3DSA:1.10.10.10 1 68 5.4E-17 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily GYO_2990 3c8c3beee9efa5aa093e53e2a1c71659 380 Gene3D G3DSA:3.40.640.10 61 235 3.0E-143 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 GYO_2990 3c8c3beee9efa5aa093e53e2a1c71659 380 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 193 212 - T 14-10-2018 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site GYO_2990 3c8c3beee9efa5aa093e53e2a1c71659 380 Pfam PF00266 Aminotransferase class-V 4 365 5.7E-85 T 14-10-2018 IPR000192 Aminotransferase class V domain GYO_2990 3c8c3beee9efa5aa093e53e2a1c71659 380 Gene3D G3DSA:1.10.260.50 15 278 3.0E-143 T 14-10-2018 GYO_2990 3c8c3beee9efa5aa093e53e2a1c71659 380 Gene3D G3DSA:3.90.1150.10 4 370 3.0E-143 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 GYO_2990 3c8c3beee9efa5aa093e53e2a1c71659 380 PIRSF PIRSF005572 1 380 3.1E-125 T 14-10-2018 IPR016454 Cysteine desulfurase KEGG: 00730+2.8.1.7|MetaCyc: PWY-7250 GYO_2990 3c8c3beee9efa5aa093e53e2a1c71659 380 SUPERFAMILY SSF53383 3 377 7.4E-102 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase GYO_0315 9440e8fe4ac95d1b01b44a35463e6a3c 147 Pfam PF09393 Phage tail tube protein 3 141 1.8E-53 T 14-10-2018 IPR018989 Phage tail tube protein GYO_0315 9440e8fe4ac95d1b01b44a35463e6a3c 147 Gene3D G3DSA:2.30.110.40 1 142 1.4E-61 T 14-10-2018 IPR038628 XkdM-like superfamily GYO_0315 9440e8fe4ac95d1b01b44a35463e6a3c 147 SUPERFAMILY SSF69279 6 142 4.08E-50 T 14-10-2018 GYO_0236 9440e8fe4ac95d1b01b44a35463e6a3c 147 Pfam PF09393 Phage tail tube protein 3 141 1.8E-53 T 14-10-2018 IPR018989 Phage tail tube protein GYO_0236 9440e8fe4ac95d1b01b44a35463e6a3c 147 Gene3D G3DSA:2.30.110.40 1 142 1.4E-61 T 14-10-2018 IPR038628 XkdM-like superfamily GYO_0236 9440e8fe4ac95d1b01b44a35463e6a3c 147 SUPERFAMILY SSF69279 6 142 4.08E-50 T 14-10-2018 GYO_3453 f66ad55a775e30bc8c0292fcbfc7e7be 496 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 325 344 7.6E-17 T 14-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 GYO_3453 f66ad55a775e30bc8c0292fcbfc7e7be 496 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 135 154 7.6E-17 T 14-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 GYO_3453 f66ad55a775e30bc8c0292fcbfc7e7be 496 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 237 261 7.6E-17 T 14-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 GYO_3453 f66ad55a775e30bc8c0292fcbfc7e7be 496 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 165 189 7.6E-17 T 14-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 GYO_3453 f66ad55a775e30bc8c0292fcbfc7e7be 496 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 377 403 7.6E-17 T 14-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 GYO_3453 f66ad55a775e30bc8c0292fcbfc7e7be 496 TIGRFAM TIGR00944 2a6301s04: multicomponent K+:H+antiporter 6 466 3.4E-227 T 14-10-2018 IPR004775 Na(+)/H(+) antiporter subunit D1 GO:0006812|GO:0015386|GO:0016021 GYO_3453 f66ad55a775e30bc8c0292fcbfc7e7be 496 Pfam PF00361 Proton-conducting membrane transporter 130 419 8.2E-49 T 14-10-2018 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 GYO_1604 96f87e69f1ef6cf6bc449421613f96d6 316 SUPERFAMILY SSF54593 1 303 2.46E-51 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase GYO_1604 96f87e69f1ef6cf6bc449421613f96d6 316 Gene3D G3DSA:3.10.180.10 4 314 8.1E-116 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase GYO_1604 96f87e69f1ef6cf6bc449421613f96d6 316 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 5 118 2.9E-20 T 14-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain GYO_1604 96f87e69f1ef6cf6bc449421613f96d6 316 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 155 275 4.9E-20 T 14-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain GYO_1604 96f87e69f1ef6cf6bc449421613f96d6 316 Gene3D G3DSA:3.10.180.10 65 219 8.1E-116 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase GYO_2701 3768f81ad738a589b451f88465d5f573 68 Pfam PF06686 Stage III sporulation protein AC/AD protein family 8 61 1.1E-15 T 14-10-2018 IPR025664 Stage III sporulation protein AC/AD family GYO_2701 3768f81ad738a589b451f88465d5f573 68 TIGRFAM TIGR02848 spore_III_AC: stage III sporulation protein AC 3 66 2.7E-32 T 14-10-2018 IPR009570 Stage III sporulation protein AC GYO_3240 994d2c48373977a2745f6cfc69561c56 265 Pfam PF01636 Phosphotransferase enzyme family 17 228 9.4E-23 T 14-10-2018 IPR002575 Aminoglycoside phosphotransferase GYO_3240 994d2c48373977a2745f6cfc69561c56 265 Gene3D G3DSA:3.90.1200.10 79 261 4.7E-21 T 14-10-2018 GYO_3240 994d2c48373977a2745f6cfc69561c56 265 SUPERFAMILY SSF56112 2 227 2.63E-33 T 14-10-2018 IPR011009 Protein kinase-like domain superfamily GYO_0860 d06986e59b4a07968241c42876b04d25 170 Hamap MF_01224_B Cyclic pyranopterin monophosphate synthase [moaC]. 2 160 35.483 T 14-10-2018 IPR023045 Molybdenum cofactor biosynthesis C GO:0006777 KEGG: 00790+4.6.1.17|MetaCyc: PWY-6823|Reactome: R-HSA-947581 GYO_0860 d06986e59b4a07968241c42876b04d25 170 SUPERFAMILY SSF55040 11 157 1.57E-56 T 14-10-2018 IPR036522 Molybdopterin cofactor biosynthesis C (MoaC) domain superfamily GO:0006777 KEGG: 00790+4.6.1.17|MetaCyc: PWY-6823|Reactome: R-HSA-947581 GYO_0860 d06986e59b4a07968241c42876b04d25 170 TIGRFAM TIGR00581 moaC: molybdenum cofactor biosynthesis protein C 4 154 4.0E-70 T 14-10-2018 IPR023045 Molybdenum cofactor biosynthesis C GO:0006777 KEGG: 00790+4.6.1.17|MetaCyc: PWY-6823|Reactome: R-HSA-947581 GYO_0860 d06986e59b4a07968241c42876b04d25 170 Gene3D G3DSA:3.30.70.640 1 162 2.1E-67 T 14-10-2018 IPR036522 Molybdopterin cofactor biosynthesis C (MoaC) domain superfamily GO:0006777 KEGG: 00790+4.6.1.17|MetaCyc: PWY-6823|Reactome: R-HSA-947581 GYO_0860 d06986e59b4a07968241c42876b04d25 170 Pfam PF01967 MoaC family 15 152 6.2E-53 T 14-10-2018 IPR002820 Molybdopterin cofactor biosynthesis C (MoaC) domain GO:0006777 KEGG: 00790+4.6.1.17|MetaCyc: PWY-6823|Reactome: R-HSA-947581 GYO_2249 c5037457c1296e6603c794f8a952966e 227 Gene3D G3DSA:3.90.1680.10 1 223 5.2E-74 T 14-10-2018 IPR036590 SOS response associated peptidase-like GYO_2249 c5037457c1296e6603c794f8a952966e 227 SUPERFAMILY SSF143081 2 222 1.96E-73 T 14-10-2018 IPR036590 SOS response associated peptidase-like GYO_2249 c5037457c1296e6603c794f8a952966e 227 Pfam PF02586 SOS response associated peptidase (SRAP) 1 212 3.6E-71 T 14-10-2018 IPR003738 SOS response associated peptidase (SRAP) GYO_3994 be255d2bb57efd6cda7b068ca3334532 113 TIGRFAM TIGR00621 ssb: single-stranded DNA-binding protein 1 110 1.0E-36 T 14-10-2018 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 Reactome: R-HSA-2151201 GYO_3994 be255d2bb57efd6cda7b068ca3334532 113 Gene3D G3DSA:2.40.50.140 1 113 1.8E-46 T 14-10-2018 GYO_3994 be255d2bb57efd6cda7b068ca3334532 113 PIRSF PIRSF002070 1 113 1.5E-32 T 14-10-2018 GYO_3994 be255d2bb57efd6cda7b068ca3334532 113 SUPERFAMILY SSF50249 1 109 5.14E-41 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold GYO_3994 be255d2bb57efd6cda7b068ca3334532 113 Hamap MF_00984 Single-stranded DNA-binding protein. 2 107 33.233 T 14-10-2018 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 Reactome: R-HSA-2151201 GYO_3994 be255d2bb57efd6cda7b068ca3334532 113 Pfam PF00436 Single-strand binding protein family 2 103 1.4E-34 T 14-10-2018 IPR000424 Primosome PriB/single-strand DNA-binding GO:0003697 Reactome: R-HSA-2151201 GYO_2035 88f4bf56195d6c2c0d9f367a09bb435b 245 Pfam PF00574 Clp protease 44 220 4.7E-35 T 14-10-2018 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA GYO_2035 88f4bf56195d6c2c0d9f367a09bb435b 245 Gene3D G3DSA:3.90.226.10 44 222 5.2E-33 T 14-10-2018 GYO_2035 88f4bf56195d6c2c0d9f367a09bb435b 245 SUPERFAMILY SSF52096 30 228 3.02E-40 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily GYO_3243 3ba79bb6662f64344a8898c01ac56695 304 PIRSF PIRSF012560 1 304 3.5E-138 T 14-10-2018 IPR012397 Pullulan 6-glucanohydrolase GYO_3068 75944111c904f547c0ba81ed8c9a1fa3 334 SUPERFAMILY SSF116965 81 291 1.44E-8 T 14-10-2018 GYO_3068 75944111c904f547c0ba81ed8c9a1fa3 334 Gene3D G3DSA:1.25.40.10 18 245 6.3E-15 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 GYO_3068 75944111c904f547c0ba81ed8c9a1fa3 334 Pfam PF14559 Tetratricopeptide repeat 28 81 3.6E-11 T 14-10-2018 GYO_3068 75944111c904f547c0ba81ed8c9a1fa3 334 SUPERFAMILY SSF48452 14 119 1.37E-15 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 GYO_1222 1cf49a96bdf8785a56eb402f28b0b508 174 Pfam PF03358 NADPH-dependent FMN reductase 1 136 5.4E-32 T 14-10-2018 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 GYO_1222 1cf49a96bdf8785a56eb402f28b0b508 174 Gene3D G3DSA:3.40.50.360 1 174 2.7E-50 T 14-10-2018 IPR029039 Flavoprotein-like superfamily GYO_1222 1cf49a96bdf8785a56eb402f28b0b508 174 SUPERFAMILY SSF52218 1 168 1.02E-37 T 14-10-2018 IPR029039 Flavoprotein-like superfamily GYO_0504 46b7286e2d8ed58c80d34d90dbb2f88c 293 Gene3D G3DSA:3.10.105.10 116 272 4.5E-119 T 14-10-2018 GYO_0504 46b7286e2d8ed58c80d34d90dbb2f88c 293 Pfam PF04069 Substrate binding domain of ABC-type glycine betaine transport system 30 172 2.6E-40 T 14-10-2018 IPR007210 ABC-type glycine betaine transport system, substrate-binding domain GO:0022857|GO:0043190|GO:0055085 GYO_0504 46b7286e2d8ed58c80d34d90dbb2f88c 293 Pfam PF04069 Substrate binding domain of ABC-type glycine betaine transport system 190 293 3.7E-23 T 14-10-2018 IPR007210 ABC-type glycine betaine transport system, substrate-binding domain GO:0022857|GO:0043190|GO:0055085 GYO_0504 46b7286e2d8ed58c80d34d90dbb2f88c 293 SUPERFAMILY SSF53850 188 293 7.76E-28 T 14-10-2018 GYO_0504 46b7286e2d8ed58c80d34d90dbb2f88c 293 SUPERFAMILY SSF53850 32 188 1.33E-49 T 14-10-2018 GYO_0504 46b7286e2d8ed58c80d34d90dbb2f88c 293 Gene3D G3DSA:3.40.190.230 33 291 4.5E-119 T 14-10-2018 GYO_0523 0213b562414dadfe81b47fd6f28f439a 318 SUPERFAMILY SSF53474 8 317 2.03E-44 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold GYO_0523 0213b562414dadfe81b47fd6f28f439a 318 Pfam PF05448 Acetyl xylan esterase (AXE1) 1 315 1.2E-141 T 14-10-2018 IPR008391 Acetyl xylan esterase GYO_0523 0213b562414dadfe81b47fd6f28f439a 318 Gene3D G3DSA:3.40.50.1820 1 318 3.5E-104 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold GYO_0729 f82f4630abc78f7d9468da242bf33848 123 Pfam PF06993 Protein of unknown function (DUF1304) 11 119 4.9E-40 T 14-10-2018 IPR009732 Protein of unknown function DUF1304 GYO_2551 a11b5231083ebea1dc41fe5bf427fa49 196 Pfam PF07670 Nucleoside recognition 44 150 1.4E-12 T 14-10-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 GYO_1630 e89085312ac4a38565a2cc50a9a5c416 300 Gene3D G3DSA:3.30.70.260 18 102 7.4E-28 T 14-10-2018 GYO_1630 e89085312ac4a38565a2cc50a9a5c416 300 Pfam PF01842 ACT domain 22 83 1.6E-10 T 14-10-2018 IPR002912 ACT domain GYO_1630 e89085312ac4a38565a2cc50a9a5c416 300 TIGRFAM TIGR00655 PurU: formyltetrahydrofolate deformylase 21 299 1.8E-139 T 14-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 GYO_1630 e89085312ac4a38565a2cc50a9a5c416 300 PIRSF PIRSF036480 17 300 6.4E-114 T 14-10-2018 GYO_1630 e89085312ac4a38565a2cc50a9a5c416 300 Hamap MF_01927 Formyltetrahydrofolate deformylase [purU]. 17 299 47.981 T 14-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 GYO_1630 e89085312ac4a38565a2cc50a9a5c416 300 Pfam PF00551 Formyl transferase 104 281 8.3E-44 T 14-10-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 GYO_1630 e89085312ac4a38565a2cc50a9a5c416 300 SUPERFAMILY SSF53328 104 300 1.57E-62 T 14-10-2018 IPR036477 Formyl transferase, N-terminal domain superfamily GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 GYO_1630 e89085312ac4a38565a2cc50a9a5c416 300 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 127 154 7.3E-65 T 14-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 GYO_1630 e89085312ac4a38565a2cc50a9a5c416 300 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 22 48 7.3E-65 T 14-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 GYO_1630 e89085312ac4a38565a2cc50a9a5c416 300 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 55 67 7.3E-65 T 14-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 GYO_1630 e89085312ac4a38565a2cc50a9a5c416 300 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 251 273 7.3E-65 T 14-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 GYO_1630 e89085312ac4a38565a2cc50a9a5c416 300 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 105 127 7.3E-65 T 14-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 GYO_1630 e89085312ac4a38565a2cc50a9a5c416 300 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 273 298 7.3E-65 T 14-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 GYO_1630 e89085312ac4a38565a2cc50a9a5c416 300 SUPERFAMILY SSF55021 21 101 1.94E-18 T 14-10-2018 GYO_1630 e89085312ac4a38565a2cc50a9a5c416 300 Gene3D G3DSA:3.40.50.170 103 300 9.0E-73 T 14-10-2018 GYO_3730 355d7f6a70a3f8dc5530a926bbed27ff 110 SUPERFAMILY SSF46689 4 98 7.35E-15 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 GYO_3280 355d7f6a70a3f8dc5530a926bbed27ff 110 SUPERFAMILY SSF46689 4 98 7.35E-15 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 GYO_1984 2a56ceb05992ddde6c7f84daa279ca58 71 Pfam PF06289 Flagellar protein (FlbD) 1 58 3.1E-27 T 14-10-2018 IPR009384 Swarming motility protein SwrD-like GYO_3149 bfe4ea093e617cd47d5f093ba2d2280b 473 Pfam PF07261 Replication initiation and membrane attachment 330 395 4.5E-12 T 14-10-2018 IPR006343 DnaD domain GYO_3776 172ec894a1123362062d63fe674632a7 151 Gene3D G3DSA:2.40.160.20 1 151 4.2E-55 T 14-10-2018 GYO_3776 172ec894a1123362062d63fe674632a7 151 Hamap MF_00775 UPF0311 protein . 4 151 25.498 T 14-10-2018 IPR020915 Uncharacterised protein family UPF0311 GYO_3776 172ec894a1123362062d63fe674632a7 151 Pfam PF11578 Protein of unknown function (DUF3237) 4 150 1.6E-41 T 14-10-2018 IPR020915 Uncharacterised protein family UPF0311 GYO_0879 ae2e18d7e449a341ebd0a63fd5820cd0 473 TIGRFAM TIGR00879 SP: MFS transporter, sugar porter (SP) family 4 450 8.5E-115 T 14-10-2018 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022857|GO:0055085 Reactome: R-HSA-189200 GYO_0879 ae2e18d7e449a341ebd0a63fd5820cd0 473 PRINTS PR00171 Sugar transporter signature 22 32 4.3E-23 T 14-10-2018 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022857|GO:0055085 Reactome: R-HSA-189200 GYO_0879 ae2e18d7e449a341ebd0a63fd5820cd0 473 PRINTS PR00171 Sugar transporter signature 356 377 4.3E-23 T 14-10-2018 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022857|GO:0055085 Reactome: R-HSA-189200 GYO_0879 ae2e18d7e449a341ebd0a63fd5820cd0 473 PRINTS PR00171 Sugar transporter signature 267 277 4.3E-23 T 14-10-2018 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022857|GO:0055085 Reactome: R-HSA-189200 GYO_0879 ae2e18d7e449a341ebd0a63fd5820cd0 473 PRINTS PR00171 Sugar transporter signature 107 126 4.3E-23 T 14-10-2018 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022857|GO:0055085 Reactome: R-HSA-189200 GYO_0879 ae2e18d7e449a341ebd0a63fd5820cd0 473 PRINTS PR00171 Sugar transporter signature 379 391 4.3E-23 T 14-10-2018 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022857|GO:0055085 Reactome: R-HSA-189200 GYO_0879 ae2e18d7e449a341ebd0a63fd5820cd0 473 SUPERFAMILY SSF103473 8 453 2.09E-77 T 14-10-2018 IPR036259 MFS transporter superfamily GYO_0879 ae2e18d7e449a341ebd0a63fd5820cd0 473 Pfam PF00083 Sugar (and other) transporter 15 455 2.7E-114 T 14-10-2018 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 GYO_0879 ae2e18d7e449a341ebd0a63fd5820cd0 473 ProSitePatterns PS00217 Sugar transport proteins signature 2. 112 137 - T 14-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 GYO_0879 ae2e18d7e449a341ebd0a63fd5820cd0 473 Gene3D G3DSA:1.20.1250.20 6 458 2.4E-128 T 14-10-2018 GYO_4022 43b1423fad713b74b61bb2bf286cd623 596 Pfam PF02348 Cytidylyltransferase 343 547 1.4E-20 T 14-10-2018 IPR003329 Acylneuraminate cytidylyltransferase KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269|Reactome: R-HSA-4085001 GYO_4022 43b1423fad713b74b61bb2bf286cd623 596 Gene3D G3DSA:3.90.550.10 339 544 2.2E-25 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases GYO_4022 43b1423fad713b74b61bb2bf286cd623 596 Gene3D G3DSA:3.20.20.70 2 281 1.7E-67 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 GYO_4022 43b1423fad713b74b61bb2bf286cd623 596 SUPERFAMILY SSF53448 338 539 5.4E-22 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases GYO_4022 43b1423fad713b74b61bb2bf286cd623 596 Gene3D G3DSA:3.90.1210.10 282 338 2.2E-5 T 14-10-2018 GYO_4022 43b1423fad713b74b61bb2bf286cd623 596 Pfam PF03102 NeuB family 30 261 8.8E-43 T 14-10-2018 IPR013132 N-acetylneuraminic acid synthase, N-terminal GO:0016051 Reactome: R-HSA-4085001 GYO_4022 43b1423fad713b74b61bb2bf286cd623 596 SUPERFAMILY SSF51569 7 272 8.43E-51 T 14-10-2018 GYO_0757 c9e2f189f438677b37d615f9be27fa76 109 Gene3D G3DSA:1.10.10.10 1 99 1.6E-38 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily GYO_0757 c9e2f189f438677b37d615f9be27fa76 109 Pfam PF01638 HxlR-like helix-turn-helix 7 95 5.6E-41 T 14-10-2018 IPR002577 Helix-turn-helix, HxlR type GYO_0757 c9e2f189f438677b37d615f9be27fa76 109 SUPERFAMILY SSF46785 1 94 2.79E-32 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily GYO_1271 dee92c34832311ce1a8fe57e2b0e473d 377 Pfam PF04286 Protein of unknown function (DUF445) 12 376 6.9E-83 T 14-10-2018 IPR007383 Protein of unknown function DUF445 GYO_1271 dee92c34832311ce1a8fe57e2b0e473d 377 PIRSF PIRSF032178 1 377 3.3E-144 T 14-10-2018 IPR016991 Protein of unknown function UCP032178 GYO_2088 e210e1c344ae43e55bd524c23b6cdaf8 85 SUPERFAMILY SSF103481 2 84 2.88E-18 T 14-10-2018 GYO_2088 e210e1c344ae43e55bd524c23b6cdaf8 85 Gene3D G3DSA:1.10.3730.20 1 85 4.3E-28 T 14-10-2018 GYO_2088 e210e1c344ae43e55bd524c23b6cdaf8 85 Pfam PF00893 Small Multidrug Resistance protein 1 75 6.9E-26 T 14-10-2018 IPR000390 Small multidrug resistance protein family GO:0016021 GYO_3239 0bef79d887c2b6d4ccd068bd375f0342 92 Pfam PF14165 YtzH-like protein 3 88 1.9E-37 T 14-10-2018 IPR025547 YtzH-like protein GYO_0042 2cac44cc1f1de24e8cae42146fcb2f92 119 PIRSF PIRSF021439 1 119 2.3E-41 T 14-10-2018 IPR010377 Initiation control protein YabA GO:0006260 GYO_0042 2cac44cc1f1de24e8cae42146fcb2f92 119 Pfam PF06156 Initiation control protein YabA 1 114 5.3E-38 T 14-10-2018 IPR010377 Initiation control protein YabA GO:0006260 GYO_0042 2cac44cc1f1de24e8cae42146fcb2f92 119 Hamap MF_01159 Initiation-control protein YabA. 1 118 25.342 T 14-10-2018 IPR010377 Initiation control protein YabA GO:0006260 GYO_0878 49bd8dd97d40c426ffed2e8c08a40248 337 SUPERFAMILY SSF81324 37 154 1.96E-13 T 14-10-2018 GYO_0878 49bd8dd97d40c426ffed2e8c08a40248 337 Pfam PF07885 Ion channel 72 155 4.4E-11 T 14-10-2018 IPR013099 Potassium channel domain GYO_0878 49bd8dd97d40c426ffed2e8c08a40248 337 Gene3D G3DSA:1.10.287.70 62 166 1.5E-9 T 14-10-2018 GYO_1237 ec4108343668cfaee8eb6bf44cf15bb8 469 SUPERFAMILY SSF46785 7 87 2.4E-16 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily GYO_1237 ec4108343668cfaee8eb6bf44cf15bb8 469 Gene3D G3DSA:3.40.640.10 93 457 1.7E-118 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 GYO_1237 ec4108343668cfaee8eb6bf44cf15bb8 469 Gene3D G3DSA:1.10.10.10 1 85 5.7E-19 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily GYO_1237 ec4108343668cfaee8eb6bf44cf15bb8 469 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 38 52 4.6E-5 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 GYO_1237 ec4108343668cfaee8eb6bf44cf15bb8 469 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 52 68 4.6E-5 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 GYO_1237 ec4108343668cfaee8eb6bf44cf15bb8 469 Pfam PF00392 Bacterial regulatory proteins, gntR family 15 77 1.5E-12 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 GYO_1237 ec4108343668cfaee8eb6bf44cf15bb8 469 Pfam PF00155 Aminotransferase class I and II 108 430 1.1E-19 T 14-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 GYO_1237 ec4108343668cfaee8eb6bf44cf15bb8 469 SMART SM00345 19 78 5.3E-8 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 GYO_1237 ec4108343668cfaee8eb6bf44cf15bb8 469 SUPERFAMILY SSF53383 93 463 1.18E-81 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase GYO_3003 cf6e562282aa5d157225c2607f75b500 110 Pfam PF06305 Lipopolysaccharide assembly protein A domain 24 85 2.6E-17 T 14-10-2018 IPR010445 Lipopolysaccharide assembly protein A domain GO:0005887 GYO_3249 90c56ff89ee05027e4e19ea5c98e514f 236 Pfam PF00005 ABC transporter 21 153 2.1E-22 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 GYO_3249 90c56ff89ee05027e4e19ea5c98e514f 236 Gene3D G3DSA:3.40.50.300 4 234 1.9E-51 T 14-10-2018 GYO_3249 90c56ff89ee05027e4e19ea5c98e514f 236 SMART SM00382 30 202 6.5E-7 T 14-10-2018 IPR003593 AAA+ ATPase domain GYO_3249 90c56ff89ee05027e4e19ea5c98e514f 236 ProSitePatterns PS00211 ABC transporters family signature. 126 140 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 GYO_3249 90c56ff89ee05027e4e19ea5c98e514f 236 SUPERFAMILY SSF52540 16 216 6.94E-50 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase GYO_0808 a2b9dbe7cbb5e722dd5d8c311ea472f8 334 Gene3D G3DSA:1.10.260.40 4 59 1.5E-20 T 14-10-2018 GYO_0808 a2b9dbe7cbb5e722dd5d8c311ea472f8 334 Gene3D G3DSA:3.40.50.2300 61 322 4.9E-78 T 14-10-2018 GYO_0808 a2b9dbe7cbb5e722dd5d8c311ea472f8 334 Pfam PF00356 Bacterial regulatory proteins, lacI family 4 49 8.4E-20 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 GYO_0808 a2b9dbe7cbb5e722dd5d8c311ea472f8 334 SUPERFAMILY SSF53822 59 331 2.36E-76 T 14-10-2018 IPR028082 Periplasmic binding protein-like I GYO_0808 a2b9dbe7cbb5e722dd5d8c311ea472f8 334 SMART SM00354 2 70 9.2E-28 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 GYO_0808 a2b9dbe7cbb5e722dd5d8c311ea472f8 334 ProSitePatterns PS00356 LacI-type HTH domain signature. 5 23 - T 14-10-2018 GYO_0808 a2b9dbe7cbb5e722dd5d8c311ea472f8 334 SUPERFAMILY SSF47413 2 52 1.23E-15 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 GYO_0808 a2b9dbe7cbb5e722dd5d8c311ea472f8 334 Pfam PF13377 Periplasmic binding protein-like domain 169 330 2.5E-38 T 14-10-2018 GYO_0808 a2b9dbe7cbb5e722dd5d8c311ea472f8 334 Gene3D G3DSA:3.40.50.2300 159 327 4.9E-78 T 14-10-2018 GYO_0808 a2b9dbe7cbb5e722dd5d8c311ea472f8 334 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 14 24 2.2E-5 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 GYO_0808 a2b9dbe7cbb5e722dd5d8c311ea472f8 334 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 4 14 2.2E-5 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 GYO_1632 e8e7ab440e53ad486318e0ce7bb748c9 415 TIGRFAM TIGR00407 proA: glutamate-5-semialdehyde dehydrogenase 11 404 1.3E-186 T 14-10-2018 IPR000965 GPR domain GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 GYO_1632 e8e7ab440e53ad486318e0ce7bb748c9 415 PIRSF PIRSF000151 1 415 1.3E-169 T 14-10-2018 IPR012134 Glutamate-5-semialdehyde dehydrogenase GO:0004350|GO:0006561|GO:0050661|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922 GYO_1632 e8e7ab440e53ad486318e0ce7bb748c9 415 SUPERFAMILY SSF53720 2 414 1.31E-108 T 14-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 GYO_1632 e8e7ab440e53ad486318e0ce7bb748c9 415 Gene3D G3DSA:3.40.605.10 18 409 3.7E-157 T 14-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 GYO_1632 e8e7ab440e53ad486318e0ce7bb748c9 415 Pfam PF00171 Aldehyde dehydrogenase family 307 377 3.7E-6 T 14-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 GYO_1632 e8e7ab440e53ad486318e0ce7bb748c9 415 Pfam PF00171 Aldehyde dehydrogenase family 73 283 3.8E-12 T 14-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 GYO_1632 e8e7ab440e53ad486318e0ce7bb748c9 415 Hamap MF_00412 Gamma-glutamyl phosphate reductase [proA]. 3 414 40.211 T 14-10-2018 IPR000965 GPR domain GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 GYO_1632 e8e7ab440e53ad486318e0ce7bb748c9 415 ProSitePatterns PS01223 Gamma-glutamyl phosphate reductase signature. 321 342 - T 14-10-2018 IPR020593 Gamma-glutamyl phosphate reductase GPR, conserved site GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 GYO_1632 e8e7ab440e53ad486318e0ce7bb748c9 415 Gene3D G3DSA:3.40.309.10 224 372 3.7E-157 T 14-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 GYO_1531 219e3ab3a61a5c048c1515c84841f245 270 SUPERFAMILY SSF69618 7 267 6.93E-58 T 14-10-2018 IPR036108 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase superfamily GO:0004852|GO:0033014 KEGG: 00860+4.2.1.75|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 GYO_1531 219e3ab3a61a5c048c1515c84841f245 270 Gene3D G3DSA:3.40.50.10090 38 174 3.5E-81 T 14-10-2018 GYO_1531 219e3ab3a61a5c048c1515c84841f245 270 Pfam PF02602 Uroporphyrinogen-III synthase HemD 20 259 2.6E-40 T 14-10-2018 IPR003754 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase GO:0004852|GO:0033014 KEGG: 00860+4.2.1.75|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 GYO_1531 219e3ab3a61a5c048c1515c84841f245 270 Gene3D G3DSA:3.40.50.10090 14 258 3.5E-81 T 14-10-2018 GYO_2362 0506974c500ffc67c6e14162a492eada 66 Pfam PF11755 Protein of unknown function (DUF3311) 9 62 5.9E-16 T 14-10-2018 IPR021741 Protein of unknown function DUF3311 GYO_3224 903e4fa1115456701d97085372dfcc39 108 Gene3D G3DSA:3.40.30.10 1 106 4.0E-37 T 14-10-2018 GYO_3224 903e4fa1115456701d97085372dfcc39 108 TIGRFAM TIGR04019 B_thiol_YtxJ: bacillithiol system protein YtxJ 6 105 1.7E-38 T 14-10-2018 IPR022551 Protein of unknown function DUF2847 GYO_3224 903e4fa1115456701d97085372dfcc39 108 SUPERFAMILY SSF52833 5 106 1.47E-9 T 14-10-2018 IPR036249 Thioredoxin-like superfamily GYO_3224 903e4fa1115456701d97085372dfcc39 108 Pfam PF11009 Protein of unknown function (DUF2847) 6 103 1.6E-36 T 14-10-2018 IPR022551 Protein of unknown function DUF2847 GYO_2294 d075e0716ed0952a9b92d1efbb175323 186 SUPERFAMILY SSF51161 2 183 9.7E-53 T 14-10-2018 IPR011004 Trimeric LpxA-like superfamily GYO_2294 d075e0716ed0952a9b92d1efbb175323 186 Gene3D G3DSA:2.160.10.10 1 185 1.0E-69 T 14-10-2018 GYO_2294 d075e0716ed0952a9b92d1efbb175323 186 SMART SM01266 5 59 2.0E-22 T 14-10-2018 IPR024688 Maltose/galactoside acetyltransferase GO:0016407 GYO_2294 d075e0716ed0952a9b92d1efbb175323 186 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 139 167 - T 14-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 GYO_2294 d075e0716ed0952a9b92d1efbb175323 186 Pfam PF12464 Maltose acetyltransferase 7 58 1.1E-16 T 14-10-2018 IPR024688 Maltose/galactoside acetyltransferase GO:0016407 GYO_2294 d075e0716ed0952a9b92d1efbb175323 186 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 134 165 1.3E-9 T 14-10-2018 IPR001451 Hexapeptide repeat GYO_1120 a6b5cedd9dc996937f7f3848637dde9d 263 Hamap MF_01114 Regulatory protein RecX [recX]. 42 209 17.91 T 14-10-2018 IPR003783 Regulatory protein RecX GO:0006282 GYO_1120 a6b5cedd9dc996937f7f3848637dde9d 263 Gene3D G3DSA:1.10.10.2800 1 107 7.1E-39 T 14-10-2018 GYO_1120 a6b5cedd9dc996937f7f3848637dde9d 263 Pfam PF02631 RecX family 210 261 1.2E-4 T 14-10-2018 IPR003783 Regulatory protein RecX GO:0006282 GYO_1120 a6b5cedd9dc996937f7f3848637dde9d 263 Pfam PF02631 RecX family 84 206 1.7E-30 T 14-10-2018 IPR003783 Regulatory protein RecX GO:0006282 GYO_1120 a6b5cedd9dc996937f7f3848637dde9d 263 Gene3D G3DSA:1.10.10.10 108 152 3.6E-14 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily GYO_1120 a6b5cedd9dc996937f7f3848637dde9d 263 Gene3D G3DSA:1.10.10.10 155 216 3.5E-15 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily GYO_1120 a6b5cedd9dc996937f7f3848637dde9d 263 Gene3D G3DSA:1.10.10.10 217 263 2.2E-12 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily GYO_4108 416d70be7aa2629ec83af6585f96e27f 1228 ProSitePatterns PS00490 Prokaryotic molybdopterin oxidoreductases signature 2. 768 785 - T 14-10-2018 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 GYO_4108 416d70be7aa2629ec83af6585f96e27f 1228 TIGRFAM TIGR01580 narG: nitrate reductase, alpha subunit 7 1227 0.0 T 14-10-2018 IPR006468 Nitrate reductase, alpha subunit GO:0008940|GO:0009325|GO:0042126|GO:0055114 KEGG: 00910+1.7.5.1|MetaCyc: PWY-6748 GYO_4108 416d70be7aa2629ec83af6585f96e27f 1228 Pfam PF01568 Molydopterin dinucleotide binding domain 1080 1194 6.9E-21 T 14-10-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0043546|GO:0055114 GYO_4108 416d70be7aa2629ec83af6585f96e27f 1228 SUPERFAMILY SSF50692 1074 1226 2.17E-44 T 14-10-2018 IPR009010 Aspartate decarboxylase-like domain superfamily GYO_4108 416d70be7aa2629ec83af6585f96e27f 1228 SUPERFAMILY SSF53706 8 1065 0.0 T 14-10-2018 GYO_4108 416d70be7aa2629ec83af6585f96e27f 1228 Pfam PF00384 Molybdopterin oxidoreductase 112 823 3.6E-188 T 14-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 GYO_4108 416d70be7aa2629ec83af6585f96e27f 1228 ProSitePatterns PS00551 Prokaryotic molybdopterin oxidoreductases signature 1. 52 70 - T 14-10-2018 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site GO:0051539 GYO_4108 416d70be7aa2629ec83af6585f96e27f 1228 Gene3D G3DSA:3.40.50.12440 48 1228 0.0 T 14-10-2018 GYO_4108 416d70be7aa2629ec83af6585f96e27f 1228 ProSitePatterns PS00932 Prokaryotic molybdopterin oxidoreductases signature 3. 1117 1144 - T 14-10-2018 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 GYO_4108 416d70be7aa2629ec83af6585f96e27f 1228 SMART SM00926 47 109 6.0E-7 T 14-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 GYO_4108 416d70be7aa2629ec83af6585f96e27f 1228 Pfam PF14710 Respiratory nitrate reductase alpha N-terminal 9 44 3.6E-13 T 14-10-2018 IPR028189 Nitrate reductase, alpha subunit, N-terminal KEGG: 00910+1.7.5.1|MetaCyc: PWY-6748 GYO_4180 2f41446080b91bd47e47b1c9e445d7d7 178 Pfam PF09671 Spore coat protein (Spore_GerQ) 91 166 6.5E-41 T 14-10-2018 IPR014099 Spore coat protein GerQ GYO_4180 2f41446080b91bd47e47b1c9e445d7d7 178 TIGRFAM TIGR02728 spore_gerQ: spore coat protein GerQ 89 170 3.7E-49 T 14-10-2018 IPR014099 Spore coat protein GerQ GYO_4180 2f41446080b91bd47e47b1c9e445d7d7 178 PIRSF PIRSF038931 5 178 1.2E-54 T 14-10-2018 IPR014099 Spore coat protein GerQ GYO_0493 c0eccac6ee9076370f25011a0defb4d9 199 Pfam PF02342 TerD domain 2 198 2.1E-72 T 14-10-2018 IPR003325 TerD domain GYO_0493 c0eccac6ee9076370f25011a0defb4d9 199 Gene3D G3DSA:2.60.60.30 19 196 7.0E-61 T 14-10-2018 GYO_4176 46c4bb384773ba6d917c0830033baba1 389 PIRSF PIRSF000390 5 388 1.6E-123 T 14-10-2018 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase GYO_4176 46c4bb384773ba6d917c0830033baba1 389 Pfam PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family 16 382 4.5E-147 T 14-10-2018 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase GYO_4176 46c4bb384773ba6d917c0830033baba1 389 SUPERFAMILY SSF53383 8 386 6.53E-129 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase GYO_4176 46c4bb384773ba6d917c0830033baba1 389 Gene3D G3DSA:3.90.1150.10 258 387 2.5E-40 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 GYO_4176 46c4bb384773ba6d917c0830033baba1 389 Gene3D G3DSA:3.40.640.10 1 257 1.5E-108 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 GYO_0035 b78e4ad416ac6d1b682d61f8edb0a872 385 PIRSF PIRSF026508 19 385 3.4E-129 T 14-10-2018 IPR008863 Toxic anion resistance GYO_0035 b78e4ad416ac6d1b682d61f8edb0a872 385 Pfam PF05816 Toxic anion resistance protein (TelA) 52 380 1.1E-121 T 14-10-2018 IPR008863 Toxic anion resistance GYO_2616 e5de4e26dfc734774ec6df3db4a1fef8 410 PRINTS PR01035 Tetracycline resistance protein signature 164 184 2.1E-9 T 14-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 GYO_2616 e5de4e26dfc734774ec6df3db4a1fef8 410 PRINTS PR01035 Tetracycline resistance protein signature 78 102 2.1E-9 T 14-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 GYO_2616 e5de4e26dfc734774ec6df3db4a1fef8 410 PRINTS PR01035 Tetracycline resistance protein signature 136 158 2.1E-9 T 14-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 GYO_2616 e5de4e26dfc734774ec6df3db4a1fef8 410 Pfam PF07690 Major Facilitator Superfamily 14 347 2.3E-35 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 GYO_2616 e5de4e26dfc734774ec6df3db4a1fef8 410 Gene3D G3DSA:1.20.1250.20 9 385 1.0E-47 T 14-10-2018 GYO_2616 e5de4e26dfc734774ec6df3db4a1fef8 410 ProSitePatterns PS00216 Sugar transport proteins signature 1. 65 81 - T 14-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 GYO_2616 e5de4e26dfc734774ec6df3db4a1fef8 410 SUPERFAMILY SSF103473 6 396 5.62E-54 T 14-10-2018 IPR036259 MFS transporter superfamily GYO_2449 47c23450691b13a0816e55cad1503913 168 Gene3D G3DSA:2.70.70.10 8 167 3.4E-59 T 14-10-2018 IPR011055 Duplicated hybrid motif GYO_2449 47c23450691b13a0816e55cad1503913 168 SUPERFAMILY SSF51261 10 161 2.96E-56 T 14-10-2018 IPR011055 Duplicated hybrid motif GYO_2449 47c23450691b13a0816e55cad1503913 168 Pfam PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 19 142 4.0E-53 T 14-10-2018 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 GYO_2449 47c23450691b13a0816e55cad1503913 168 TIGRFAM TIGR00830 PTBA: PTS system, glucose subfamily, IIA component 20 140 2.2E-46 T 14-10-2018 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 GYO_2449 47c23450691b13a0816e55cad1503913 168 ProSitePatterns PS00371 PTS EIIA domains phosphorylation site signature 1. 82 94 - T 14-10-2018 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 GYO_3728 1410d910177a47f14843660871974bfe 255 Pfam PF00704 Glycosyl hydrolases family 18 18 241 2.7E-36 T 14-10-2018 IPR001223 Glycoside hydrolase family 18, catalytic domain GO:0005975 GYO_3728 1410d910177a47f14843660871974bfe 255 Gene3D G3DSA:3.10.50.10 157 213 2.2E-77 T 14-10-2018 IPR029070 Chitinase insertion domain superfamily GYO_3728 1410d910177a47f14843660871974bfe 255 Gene3D G3DSA:3.20.20.80 2 247 2.2E-77 T 14-10-2018 GYO_3728 1410d910177a47f14843660871974bfe 255 SUPERFAMILY SSF51445 11 249 1.58E-39 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily GYO_3728 1410d910177a47f14843660871974bfe 255 SMART SM00636 2 242 1.3E-15 T 14-10-2018 IPR011583 Chitinase II GO:0008061 GYO_0450 e464455ec05bc1400596c7f5616d1a5a 508 TIGRFAM TIGR03248 galactar-dH20: galactarate dehydratase 10 508 4.7E-281 T 14-10-2018 IPR017654 Galactarate dehydratase GarD-like GO:0008867|GO:0046392 KEGG: 00053+4.2.1.42|MetaCyc: PWY-6497 GYO_0450 e464455ec05bc1400596c7f5616d1a5a 508 Pfam PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus 115 506 1.3E-143 T 14-10-2018 IPR007392 D-galactarate/Altronate dehydratase, C-terminal GO:0016829 GYO_0450 e464455ec05bc1400596c7f5616d1a5a 508 Pfam PF08666 SAF domain 18 87 4.2E-7 T 14-10-2018 IPR013974 SAF domain Reactome: R-HSA-4085001 GYO_0450 e464455ec05bc1400596c7f5616d1a5a 508 Gene3D G3DSA:3.90.1210.30 10 87 2.0E-25 T 14-10-2018 GYO_0450 e464455ec05bc1400596c7f5616d1a5a 508 SMART SM00858 18 88 2.8E-9 T 14-10-2018 IPR013974 SAF domain Reactome: R-HSA-4085001 GYO_2168 a55ad13f38bcb413d730dd61af724c67 909 Gene3D G3DSA:1.10.1440.20 606 667 1.4E-23 T 14-10-2018 GYO_2168 a55ad13f38bcb413d730dd61af724c67 909 SUPERFAMILY SSF52016 646 905 4.91E-88 T 14-10-2018 GYO_2168 a55ad13f38bcb413d730dd61af724c67 909 SUPERFAMILY SSF53732 11 642 3.4E-224 T 14-10-2018 IPR036008 Aconitase, iron-sulfur domain KEGG: 00290+4.2.1.33 GYO_2168 a55ad13f38bcb413d730dd61af724c67 909 Gene3D G3DSA:3.30.499.10 381 605 5.1E-99 T 14-10-2018 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 KEGG: 00290+4.2.1.33 GYO_2168 a55ad13f38bcb413d730dd61af724c67 909 ProSitePatterns PS00450 Aconitase family signature 1. 442 458 - T 14-10-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 GYO_2168 a55ad13f38bcb413d730dd61af724c67 909 Pfam PF00330 Aconitase family (aconitate hydratase) 85 577 2.7E-174 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 GYO_2168 a55ad13f38bcb413d730dd61af724c67 909 Gene3D G3DSA:3.30.499.20 11 380 5.2E-160 T 14-10-2018 GYO_2168 a55ad13f38bcb413d730dd61af724c67 909 ProSitePatterns PS01244 Aconitase family signature 2. 508 521 - T 14-10-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 GYO_2168 a55ad13f38bcb413d730dd61af724c67 909 TIGRFAM TIGR01341 aconitase_1: aconitate hydratase 1 24 906 0.0 T 14-10-2018 IPR006249 Aconitase/Iron-responsive element-binding protein 2 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00720+4.2.1.3|Reactome: R-HSA-917937 GYO_2168 a55ad13f38bcb413d730dd61af724c67 909 Pfam PF00694 Aconitase C-terminal domain 707 834 1.9E-46 T 14-10-2018 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain KEGG: 00290+4.2.1.33 GYO_2168 a55ad13f38bcb413d730dd61af724c67 909 PRINTS PR00415 Aconitase family signature 380 394 1.5E-41 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 GYO_2168 a55ad13f38bcb413d730dd61af724c67 909 PRINTS PR00415 Aconitase family signature 286 299 1.5E-41 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 GYO_2168 a55ad13f38bcb413d730dd61af724c67 909 PRINTS PR00415 Aconitase family signature 153 166 1.5E-41 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 GYO_2168 a55ad13f38bcb413d730dd61af724c67 909 PRINTS PR00415 Aconitase family signature 210 223 1.5E-41 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 GYO_2168 a55ad13f38bcb413d730dd61af724c67 909 PRINTS PR00415 Aconitase family signature 446 457 1.5E-41 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 GYO_2168 a55ad13f38bcb413d730dd61af724c67 909 PRINTS PR00415 Aconitase family signature 177 185 1.5E-41 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 GYO_2168 a55ad13f38bcb413d730dd61af724c67 909 PRINTS PR00415 Aconitase family signature 300 313 1.5E-41 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 GYO_2168 a55ad13f38bcb413d730dd61af724c67 909 PRINTS PR00415 Aconitase family signature 224 239 1.5E-41 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 GYO_2168 a55ad13f38bcb413d730dd61af724c67 909 PRINTS PR00415 Aconitase family signature 508 521 1.5E-41 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 GYO_2168 a55ad13f38bcb413d730dd61af724c67 909 Gene3D G3DSA:3.20.19.10 669 907 1.1E-102 T 14-10-2018 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel KEGG: 00290+4.2.1.33 GYO_2189 633f9e08248155171d472872b44668e7 509 Gene3D G3DSA:3.90.226.10 246 508 2.9E-84 T 14-10-2018 GYO_2189 633f9e08248155171d472872b44668e7 509 SUPERFAMILY SSF52096 236 508 8.62E-82 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily GYO_2189 633f9e08248155171d472872b44668e7 509 SUPERFAMILY SSF52096 7 249 2.85E-65 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily GYO_2189 633f9e08248155171d472872b44668e7 509 Pfam PF01039 Carboxyl transferase domain 27 506 2.8E-168 T 14-10-2018 IPR034733 Acetyl-CoA carboxylase MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722|Reactome: R-HSA-196780 GYO_2189 633f9e08248155171d472872b44668e7 509 Gene3D G3DSA:3.90.226.10 2 245 5.6E-77 T 14-10-2018 GYO_3712 c91b8ba45ff5fa3387d1839be0a80328 153 Pfam PF00583 Acetyltransferase (GNAT) family 25 118 5.6E-16 T 14-10-2018 IPR000182 GNAT domain GYO_3712 c91b8ba45ff5fa3387d1839be0a80328 153 SUPERFAMILY SSF55729 14 152 2.45E-28 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase GYO_3712 c91b8ba45ff5fa3387d1839be0a80328 153 Gene3D G3DSA:3.40.630.30 1 153 2.6E-48 T 14-10-2018 GYO_0644 98365c7a02e1871e1421f807e1e85549 728 SMART SM00436 126 216 9.5E-45 T 14-10-2018 IPR003601 DNA topoisomerase, type IA, domain 2 GO:0003677|GO:0003916|GO:0006265 GYO_0644 98365c7a02e1871e1421f807e1e85549 728 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 305 314 1.4E-27 T 14-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 GYO_0644 98365c7a02e1871e1421f807e1e85549 728 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 511 525 1.4E-27 T 14-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 GYO_0644 98365c7a02e1871e1421f807e1e85549 728 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 100 113 1.4E-27 T 14-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 GYO_0644 98365c7a02e1871e1421f807e1e85549 728 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 186 204 1.4E-27 T 14-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 GYO_0644 98365c7a02e1871e1421f807e1e85549 728 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 387 403 1.4E-27 T 14-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 GYO_0644 98365c7a02e1871e1421f807e1e85549 728 SUPERFAMILY SSF56712 3 598 3.79E-176 T 14-10-2018 IPR023405 DNA topoisomerase, type IA, core domain GYO_0644 98365c7a02e1871e1421f807e1e85549 728 TIGRFAM TIGR01056 topB: DNA topoisomerase III 3 728 0.0 T 14-10-2018 IPR005738 DNA topoisomerase III GO:0003677|GO:0003916|GO:0006265 GYO_0644 98365c7a02e1871e1421f807e1e85549 728 SMART SM00437 262 548 5.7E-115 T 14-10-2018 IPR003602 DNA topoisomerase, type IA, DNA-binding domain GO:0003677|GO:0003916|GO:0006265 GYO_0644 98365c7a02e1871e1421f807e1e85549 728 Hamap MF_00953 DNA topoisomerase 3 [topB]. 3 637 69.468 T 14-10-2018 IPR005738 DNA topoisomerase III GO:0003677|GO:0003916|GO:0006265 GYO_0644 98365c7a02e1871e1421f807e1e85549 728 Gene3D G3DSA:1.10.290.10 271 401 1.1E-146 T 14-10-2018 IPR013826 DNA topoisomerase, type IA, central region, subdomain 3 GYO_0644 98365c7a02e1871e1421f807e1e85549 728 Pfam PF01751 Toprim domain 5 134 3.1E-14 T 14-10-2018 IPR006171 TOPRIM domain GYO_0644 98365c7a02e1871e1421f807e1e85549 728 Pfam PF01131 DNA topoisomerase 152 582 7.0E-124 T 14-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 GYO_0644 98365c7a02e1871e1421f807e1e85549 728 ProSitePatterns PS00396 Prokaryotic DNA topoisomerase I active site. 299 314 - T 14-10-2018 IPR023406 DNA topoisomerase, type IA, active site GO:0003917 GYO_0644 98365c7a02e1871e1421f807e1e85549 728 SMART SM00493 3 126 8.8E-22 T 14-10-2018 IPR006171 TOPRIM domain GYO_0644 98365c7a02e1871e1421f807e1e85549 728 Gene3D G3DSA:3.40.50.140 3 154 2.0E-52 T 14-10-2018 GYO_0644 98365c7a02e1871e1421f807e1e85549 728 Gene3D G3DSA:1.10.460.10 160 592 1.1E-146 T 14-10-2018 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 GYO_0644 98365c7a02e1871e1421f807e1e85549 728 Gene3D G3DSA:2.70.20.10 210 476 1.1E-146 T 14-10-2018 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 GYO_3725 aee19725437020a7a7d79629f7510a4e 292 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 6.0E-7 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 GYO_3725 aee19725437020a7a7d79629f7510a4e 292 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 6.0E-7 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 GYO_3725 aee19725437020a7a7d79629f7510a4e 292 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 6.0E-7 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 GYO_3725 aee19725437020a7a7d79629f7510a4e 292 Gene3D G3DSA:3.40.190.10 92 284 5.0E-44 T 14-10-2018 GYO_3725 aee19725437020a7a7d79629f7510a4e 292 Gene3D G3DSA:3.40.190.10 160 262 5.0E-44 T 14-10-2018 GYO_3725 aee19725437020a7a7d79629f7510a4e 292 Gene3D G3DSA:1.10.10.10 1 84 1.1E-24 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily GYO_3725 aee19725437020a7a7d79629f7510a4e 292 Pfam PF03466 LysR substrate binding domain 91 288 5.4E-41 T 14-10-2018 IPR005119 LysR, substrate-binding GYO_3725 aee19725437020a7a7d79629f7510a4e 292 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 62 4.9E-21 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 GYO_3725 aee19725437020a7a7d79629f7510a4e 292 SUPERFAMILY SSF46785 1 112 2.02E-23 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily GYO_3725 aee19725437020a7a7d79629f7510a4e 292 SUPERFAMILY SSF53850 92 290 7.14E-37 T 14-10-2018 GYO_2404 a276b5447af13f5cf375e587c17a911b 168 PRINTS PR00070 Dihydrofolate reductase signature 91 105 1.9E-15 T 14-10-2018 GYO_2404 a276b5447af13f5cf375e587c17a911b 168 PRINTS PR00070 Dihydrofolate reductase signature 13 23 1.9E-15 T 14-10-2018 GYO_2404 a276b5447af13f5cf375e587c17a911b 168 PRINTS PR00070 Dihydrofolate reductase signature 40 51 1.9E-15 T 14-10-2018 GYO_2404 a276b5447af13f5cf375e587c17a911b 168 PRINTS PR00070 Dihydrofolate reductase signature 27 35 1.9E-15 T 14-10-2018 GYO_2404 a276b5447af13f5cf375e587c17a911b 168 PIRSF PIRSF000194 1 162 1.4E-63 T 14-10-2018 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0046654|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614 GYO_2404 a276b5447af13f5cf375e587c17a911b 168 Gene3D G3DSA:3.40.430.10 1 166 7.1E-65 T 14-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 GYO_2404 a276b5447af13f5cf375e587c17a911b 168 Pfam PF00186 Dihydrofolate reductase 1 159 2.3E-64 T 14-10-2018 IPR001796 Dihydrofolate reductase domain GO:0004146|GO:0046654|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|Reactome: R-HSA-196757 GYO_2404 a276b5447af13f5cf375e587c17a911b 168 SUPERFAMILY SSF53597 1 160 1.31E-61 T 14-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 GYO_2404 a276b5447af13f5cf375e587c17a911b 168 ProSitePatterns PS00075 Dihydrofolate reductase (DHFR) domain signature. 13 35 - T 14-10-2018 IPR017925 Dihydrofolate reductase conserved site GO:0004146|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|Reactome: R-HSA-1474151|Reactome: R-HSA-196757|Reactome: R-HSA-539107 GYO_3624 c3e6850cc36ec68e98ee001c8ad70846 290 SUPERFAMILY SSF81345 3 282 2.88E-76 T 14-10-2018 IPR037294 ABC transporter, BtuC-like GYO_3624 c3e6850cc36ec68e98ee001c8ad70846 290 Pfam PF01032 FecCD transport family 3 282 3.9E-88 T 14-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 GYO_3624 c3e6850cc36ec68e98ee001c8ad70846 290 Gene3D G3DSA:1.10.3470.10 1 287 5.0E-94 T 14-10-2018 IPR037294 ABC transporter, BtuC-like GYO_0721 7c396fb538c2039b9e77f5ad06472a30 254 Gene3D G3DSA:3.60.15.10 1 254 2.3E-65 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like GYO_0721 7c396fb538c2039b9e77f5ad06472a30 254 Pfam PF12706 Beta-lactamase superfamily domain 20 217 4.6E-12 T 14-10-2018 IPR001279 Metallo-beta-lactamase GYO_0721 7c396fb538c2039b9e77f5ad06472a30 254 SUPERFAMILY SSF56281 1 254 1.27E-17 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like GYO_0530 dd584aa405c3f476185f62ff8f827001 285 TIGRFAM TIGR03943 TIGR03943: TIGR03943 family protein 20 280 8.5E-59 T 14-10-2018 IPR015402 Protein of unknown function DUF1980 GYO_0530 dd584aa405c3f476185f62ff8f827001 285 Pfam PF09323 Domain of unknown function (DUF1980) 1 190 8.6E-62 T 14-10-2018 IPR015402 Protein of unknown function DUF1980 GYO_0355 307ea2826e4a4736bc76b899f687b0fe 529 Pfam PF01497 Periplasmic binding protein 270 502 1.1E-23 T 14-10-2018 IPR002491 ABC transporter periplasmic binding domain GYO_0355 307ea2826e4a4736bc76b899f687b0fe 529 SUPERFAMILY SSF46689 163 213 1.67E-7 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 GYO_0355 307ea2826e4a4736bc76b899f687b0fe 529 SMART SM00342 179 262 6.0E-29 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 GYO_0355 307ea2826e4a4736bc76b899f687b0fe 529 Gene3D G3DSA:3.40.50.1980 378 527 3.6E-29 T 14-10-2018 GYO_0355 307ea2826e4a4736bc76b899f687b0fe 529 SUPERFAMILY SSF46689 216 266 1.39E-12 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 GYO_0355 307ea2826e4a4736bc76b899f687b0fe 529 Gene3D G3DSA:3.40.50.1980 262 376 3.1E-7 T 14-10-2018 GYO_0355 307ea2826e4a4736bc76b899f687b0fe 529 SUPERFAMILY SSF53807 264 524 7.06E-41 T 14-10-2018 GYO_0355 307ea2826e4a4736bc76b899f687b0fe 529 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 246 262 3.1E-5 T 14-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 GYO_0355 307ea2826e4a4736bc76b899f687b0fe 529 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 231 246 3.1E-5 T 14-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 GYO_0355 307ea2826e4a4736bc76b899f687b0fe 529 Pfam PF12833 Helix-turn-helix domain 185 263 6.5E-20 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 GYO_0355 307ea2826e4a4736bc76b899f687b0fe 529 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 216 258 - T 14-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 GYO_0355 307ea2826e4a4736bc76b899f687b0fe 529 Gene3D G3DSA:1.10.10.2730 217 261 1.6E-16 T 14-10-2018 GYO_0355 307ea2826e4a4736bc76b899f687b0fe 529 Gene3D G3DSA:1.10.10.60 160 216 1.5E-12 T 14-10-2018 GYO_1521 c02cdc850cbda927851d7286fd9893bc 144 Pfam PF10990 Protein of unknown function (DUF2809) 41 125 1.5E-28 T 14-10-2018 IPR021257 Protein of unknown function DUF2809 GYO_3457 c1475afffd9d5524311657e724e79334 126 TIGRFAM TIGR00369 unchar_dom_1: uncharacterized domain 1 7 123 2.1E-46 T 14-10-2018 IPR003736 Phenylacetic acid degradation-related domain Reactome: R-HSA-77289 GYO_3457 c1475afffd9d5524311657e724e79334 126 Pfam PF03061 Thioesterase superfamily 37 115 2.0E-18 T 14-10-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 GYO_3457 c1475afffd9d5524311657e724e79334 126 Gene3D G3DSA:3.10.129.10 1 126 5.7E-50 T 14-10-2018 GYO_3457 c1475afffd9d5524311657e724e79334 126 SUPERFAMILY SSF54637 5 126 7.28E-31 T 14-10-2018 IPR029069 HotDog domain superfamily GYO_2531 dea9dea443cf44aa15d7373773ee2171 147 ProDom PD089241 YPBF MEMBRANE BH1610 TRANSMEMBRANE 17 145 1.0E-58 T 14-10-2018 IPR020210 Uncharacterised protein family, YpbF, transmembrane GYO_2531 dea9dea443cf44aa15d7373773ee2171 147 Pfam PF10864 Protein of unknown function (DUF2663) 19 145 2.3E-51 T 14-10-2018 IPR020210 Uncharacterised protein family, YpbF, transmembrane GYO_4293 9fbbabae358dc9cb1bd843740d2b2a58 406 Pfam PF07730 Histidine kinase 202 264 4.9E-18 T 14-10-2018 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 GYO_4293 9fbbabae358dc9cb1bd843740d2b2a58 406 SUPERFAMILY SSF55874 287 397 4.67E-11 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily GYO_4293 9fbbabae358dc9cb1bd843740d2b2a58 406 Gene3D G3DSA:3.30.565.10 275 394 3.4E-23 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily GYO_1933 9ba571459c06cd320e6ffb964454e897 120 Pfam PF03780 Asp23 family, cell envelope-related function 9 116 1.7E-36 T 14-10-2018 IPR005531 Alkaline shock protein Asp23 GYO_0687 71eaed4225533056c7d2b4a3109e1240 116 Gene3D G3DSA:2.30.30.110 1 116 7.3E-52 T 14-10-2018 IPR011067 Plasmid maintenance toxin/Cell growth inhibitor GYO_0687 71eaed4225533056c7d2b4a3109e1240 116 SUPERFAMILY SSF50118 2 113 2.78E-41 T 14-10-2018 GYO_0687 71eaed4225533056c7d2b4a3109e1240 116 PIRSF PIRSF033490 1 113 2.9E-39 T 14-10-2018 IPR003477 mRNA interferase PemK-like GO:0003677 GYO_0687 71eaed4225533056c7d2b4a3109e1240 116 Pfam PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system 4 111 4.7E-33 T 14-10-2018 IPR003477 mRNA interferase PemK-like GO:0003677 GYO_3328 a63b7c8538b2f8b028a979f3a6f87f03 295 Pfam PF00950 ABC 3 transport family 6 272 2.5E-42 T 14-10-2018 IPR001626 ABC transporter, TroCD-like GO:0005887|GO:0042626|GO:0043190|GO:0055085 GYO_3328 a63b7c8538b2f8b028a979f3a6f87f03 295 SUPERFAMILY SSF81345 8 273 7.45E-34 T 14-10-2018 IPR037294 ABC transporter, BtuC-like GYO_4173 745ae25c1ed33bed24fd632fbcdebe5f 240 Gene3D G3DSA:3.90.550.10 2 215 9.7E-34 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases GYO_4173 745ae25c1ed33bed24fd632fbcdebe5f 240 SUPERFAMILY SSF53448 1 209 1.56E-24 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases GYO_4173 745ae25c1ed33bed24fd632fbcdebe5f 240 Pfam PF02348 Cytidylyltransferase 6 212 8.7E-54 T 14-10-2018 IPR003329 Acylneuraminate cytidylyltransferase KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269|Reactome: R-HSA-4085001 GYO_4355 0f89d6609c8094cfd99a0afc429e5aee 380 Gene3D G3DSA:3.30.70.360 178 290 1.1E-138 T 14-10-2018 GYO_4355 0f89d6609c8094cfd99a0afc429e5aee 380 PIRSF PIRSF005962 2 378 1.7E-123 T 14-10-2018 IPR017439 Amidohydrolase GO:0016787 GYO_4355 0f89d6609c8094cfd99a0afc429e5aee 380 SUPERFAMILY SSF53187 6 373 7.71E-83 T 14-10-2018 GYO_4355 0f89d6609c8094cfd99a0afc429e5aee 380 TIGRFAM TIGR01891 amidohydrolases: amidohydrolase 10 364 1.0E-124 T 14-10-2018 IPR017439 Amidohydrolase GO:0016787 GYO_4355 0f89d6609c8094cfd99a0afc429e5aee 380 Pfam PF07687 Peptidase dimerisation domain 181 277 1.1E-11 T 14-10-2018 IPR011650 Peptidase M20, dimerisation domain GYO_4355 0f89d6609c8094cfd99a0afc429e5aee 380 Gene3D G3DSA:3.40.630.10 14 364 1.1E-138 T 14-10-2018 GYO_4355 0f89d6609c8094cfd99a0afc429e5aee 380 SUPERFAMILY SSF55031 179 292 4.58E-31 T 14-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain GYO_4355 0f89d6609c8094cfd99a0afc429e5aee 380 Pfam PF01546 Peptidase family M20/M25/M40 69 372 8.2E-36 T 14-10-2018 IPR002933 Peptidase M20 GO:0016787 GYO_2787 ea954a397e5c2dfaef4817f8e6a788f8 164 Pfam PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 29 157 3.7E-40 T 14-10-2018 IPR003791 Protein of unknown function UPF0178 GYO_2787 ea954a397e5c2dfaef4817f8e6a788f8 164 Hamap MF_00489 UPF0178 protein YaiI [yaiI]. 14 159 31.62 T 14-10-2018 IPR003791 Protein of unknown function UPF0178 GYO_2271 ab06ef10789ce126a67efe5accb2e190 206 SUPERFAMILY SSF81296 28 204 3.64E-54 T 14-10-2018 IPR014756 Immunoglobulin E-set GYO_2271 ab06ef10789ce126a67efe5accb2e190 206 Pfam PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading 28 202 4.9E-38 T 14-10-2018 IPR004302 Cellulose/chitin-binding protein, N-terminal GYO_2271 ab06ef10789ce126a67efe5accb2e190 206 Gene3D G3DSA:2.70.50.50 28 205 5.0E-78 T 14-10-2018 GYO_3481 7236b16c1d00ef3252322b56da9f38ab 97 Gene3D G3DSA:1.10.287.1060 1 97 2.8E-27 T 14-10-2018 GYO_3481 7236b16c1d00ef3252322b56da9f38ab 97 Pfam PF06013 Proteins of 100 residues with WXG 5 89 3.7E-25 T 14-10-2018 IPR010310 Type VII secretion system ESAT-6-like GYO_3481 7236b16c1d00ef3252322b56da9f38ab 97 SUPERFAMILY SSF140453 4 97 2.09E-23 T 14-10-2018 IPR036689 ESAT-6-like superfamily GYO_3481 7236b16c1d00ef3252322b56da9f38ab 97 TIGRFAM TIGR03930 WXG100_ESAT6: WXG100 family type VII secretion target 5 93 6.5E-27 T 14-10-2018 IPR010310 Type VII secretion system ESAT-6-like GYO_1209 7f74f8fe73b9ec025d5d0d56d6c06849 131 Pfam PF17326 Family of unknown function (DUF5365) 8 120 9.3E-42 T 14-10-2018 IPR020355 Uncharacterised protein family YhcU GYO_1209 7f74f8fe73b9ec025d5d0d56d6c06849 131 ProDom PD081567 YHCU 8 116 7.0E-58 T 14-10-2018 IPR020355 Uncharacterised protein family YhcU GYO_4007 f4684f0f027308a0bfe21f2076c5c53f 93 ProSitePatterns PS00894 DeoR-type HTH domain signature. 8 41 - T 14-10-2018 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 GYO_4007 f4684f0f027308a0bfe21f2076c5c53f 93 Pfam PF12116 Stage III sporulation protein D 2 82 6.2E-41 T 14-10-2018 IPR014208 Sporulation stage III, transcriptional regulator SpoIIID GYO_4007 f4684f0f027308a0bfe21f2076c5c53f 93 TIGRFAM TIGR02844 spore_III_D: sporulation transcriptional regulator SpoIIID 2 81 2.6E-46 T 14-10-2018 IPR014208 Sporulation stage III, transcriptional regulator SpoIIID GYO_4007 f4684f0f027308a0bfe21f2076c5c53f 93 Gene3D G3DSA:1.10.10.60 1 93 9.1E-46 T 14-10-2018 GYO_3790 ea9c4b50d8375e02754c5dbbce209f51 561 SUPERFAMILY SSF51011 483 557 1.11E-19 T 14-10-2018 GYO_3790 ea9c4b50d8375e02754c5dbbce209f51 561 SUPERFAMILY SSF51445 3 480 4.49E-156 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily GYO_3790 ea9c4b50d8375e02754c5dbbce209f51 561 SMART SM00642 12 422 1.7E-155 T 14-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 GYO_3790 ea9c4b50d8375e02754c5dbbce209f51 561 Pfam PF16657 Maltogenic Amylase, C-terminal domain 483 556 3.7E-10 T 14-10-2018 IPR032091 Maltogenic Amylase, C-terminal GYO_3790 ea9c4b50d8375e02754c5dbbce209f51 561 Pfam PF00128 Alpha amylase, catalytic domain 27 380 4.3E-133 T 14-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 GYO_3790 ea9c4b50d8375e02754c5dbbce209f51 561 Gene3D G3DSA:3.90.400.10 104 174 1.2E-211 T 14-10-2018 GYO_3790 ea9c4b50d8375e02754c5dbbce209f51 561 Gene3D G3DSA:2.60.40.1180 484 561 2.8E-24 T 14-10-2018 IPR013780 Glycosyl hydrolase, all-beta GYO_3790 ea9c4b50d8375e02754c5dbbce209f51 561 Gene3D G3DSA:3.20.20.80 4 476 1.2E-211 T 14-10-2018 GYO_4510 e4d82627c352c99ed3597391b8708a11 205 TIGRFAM TIGR02841 spore_YyaC: putative sporulation protein YyaC 43 182 3.1E-71 T 14-10-2018 IPR009665 Protein of unknown function DUF1256 GYO_4510 e4d82627c352c99ed3597391b8708a11 205 SUPERFAMILY SSF53163 1 198 1.03E-58 T 14-10-2018 IPR023430 Peptidase HybD-like domain superfamily GYO_4510 e4d82627c352c99ed3597391b8708a11 205 Pfam PF06866 Protein of unknown function (DUF1256) 18 180 6.5E-70 T 14-10-2018 IPR009665 Protein of unknown function DUF1256 GYO_0175 18960f67d811fe9a91ae9861885d7a56 145 Gene3D G3DSA:3.90.1180.10 1 143 1.7E-61 T 14-10-2018 IPR036899 Ribosomal protein L13 superfamily GO:0003735|GO:0005840|GO:0006412 GYO_0175 18960f67d811fe9a91ae9861885d7a56 145 TIGRFAM TIGR01066 rplM_bact: ribosomal protein uL13 6 142 7.8E-67 T 14-10-2018 IPR005823 Ribosomal protein L13, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 GYO_0175 18960f67d811fe9a91ae9861885d7a56 145 Hamap MF_01366 50S ribosomal protein L13 [rplM]. 16 144 28.809 T 14-10-2018 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 GYO_0175 18960f67d811fe9a91ae9861885d7a56 145 PIRSF PIRSF002181 1 143 3.8E-51 T 14-10-2018 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 GYO_0175 18960f67d811fe9a91ae9861885d7a56 145 ProSitePatterns PS00783 Ribosomal protein L13 signature. 106 128 - T 14-10-2018 IPR023563 Ribosomal protein L13, conserved site GO:0003735|GO:0005840|GO:0006412 GYO_0175 18960f67d811fe9a91ae9861885d7a56 145 SUPERFAMILY SSF52161 6 143 6.67E-60 T 14-10-2018 IPR036899 Ribosomal protein L13 superfamily GO:0003735|GO:0005840|GO:0006412 GYO_0175 18960f67d811fe9a91ae9861885d7a56 145 Pfam PF00572 Ribosomal protein L13 15 139 7.2E-58 T 14-10-2018 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 GYO_4218 fecbd8f304eaf3ab018c10d1749a1519 513 Gene3D G3DSA:1.20.1730.10 20 493 4.5E-69 T 14-10-2018 IPR038377 Sodium/glucose symporter superfamily GYO_4218 fecbd8f304eaf3ab018c10d1749a1519 513 TIGRFAM TIGR00813 sss: transporter, solute:sodium symporter (SSS) family 33 434 1.6E-100 T 14-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 GYO_4218 fecbd8f304eaf3ab018c10d1749a1519 513 Pfam PF00474 Sodium:solute symporter family 33 434 8.7E-138 T 14-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 GYO_4218 fecbd8f304eaf3ab018c10d1749a1519 513 ProSitePatterns PS00457 Sodium:solute symporter family signature 2. 416 436 - T 14-10-2018 IPR018212 Sodium/solute symporter, conserved site GYO_4218 fecbd8f304eaf3ab018c10d1749a1519 513 ProSitePatterns PS00456 Sodium:solute symporter family signature 1. 148 173 - T 14-10-2018 IPR018212 Sodium/solute symporter, conserved site GYO_2938 413edaf3ae77178c00c19643287e919a 275 TIGRFAM TIGR00828 EIID-AGA: PTS system, mannose/fructose/sorbose family, IID component 5 274 3.2E-146 T 14-10-2018 IPR004704 Phosphotransferase system, mannose/fructose/sorbose family IID component GO:0009401|GO:0016021 GYO_2938 413edaf3ae77178c00c19643287e919a 275 Pfam PF03613 PTS system mannose/fructose/sorbose family IID component 7 274 1.0E-102 T 14-10-2018 IPR004704 Phosphotransferase system, mannose/fructose/sorbose family IID component GO:0009401|GO:0016021 GYO_0974 43032b6efcad8a0418eece94a2bf1c8c 231 Gene3D G3DSA:3.30.240.20 168 230 1.7E-20 T 14-10-2018 IPR023090 UPF0702, alpha/beta domain superfamily GYO_0974 43032b6efcad8a0418eece94a2bf1c8c 231 Pfam PF04239 Protein of unknown function (DUF421) 88 204 2.3E-34 T 14-10-2018 IPR007353 Protein of unknown function DUF421 GYO_0974 43032b6efcad8a0418eece94a2bf1c8c 231 Gene3D G3DSA:3.30.240.20 80 155 2.3E-25 T 14-10-2018 IPR023090 UPF0702, alpha/beta domain superfamily GYO_3665 6a4f43a79a909d7592709b5fe0f4ab36 101 Pfam PF02583 Metal-sensitive transcriptional repressor 17 97 8.9E-33 T 14-10-2018 IPR003735 Metal-sensitive transcriptional repressor GO:0003677|GO:0006355|GO:0046872 GYO_3665 6a4f43a79a909d7592709b5fe0f4ab36 101 Gene3D G3DSA:1.20.58.1000 1 100 9.2E-40 T 14-10-2018 IPR038390 Metal-sensitive transcriptional repressor superfamily GYO_3861 24638d59f0ef8a7cb4eadc17f9d4610b 444 Gene3D G3DSA:1.20.1720.10 9 233 2.4E-51 T 14-10-2018 GYO_3861 24638d59f0ef8a7cb4eadc17f9d4610b 444 PRINTS PR01036 Tetracycline resistance protein TetB signature 199 217 8.5E-6 T 14-10-2018 GYO_3861 24638d59f0ef8a7cb4eadc17f9d4610b 444 PRINTS PR01036 Tetracycline resistance protein TetB signature 133 157 8.5E-6 T 14-10-2018 GYO_3861 24638d59f0ef8a7cb4eadc17f9d4610b 444 PRINTS PR01036 Tetracycline resistance protein TetB signature 103 123 8.5E-6 T 14-10-2018 GYO_3861 24638d59f0ef8a7cb4eadc17f9d4610b 444 Pfam PF07690 Major Facilitator Superfamily 13 197 4.4E-37 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 GYO_3861 24638d59f0ef8a7cb4eadc17f9d4610b 444 Pfam PF07690 Major Facilitator Superfamily 263 428 3.6E-17 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 GYO_3861 24638d59f0ef8a7cb4eadc17f9d4610b 444 Gene3D G3DSA:1.20.1250.20 250 442 1.3E-23 T 14-10-2018 GYO_3861 24638d59f0ef8a7cb4eadc17f9d4610b 444 SUPERFAMILY SSF103473 3 438 1.24E-69 T 14-10-2018 IPR036259 MFS transporter superfamily GYO_3512 bd5bb5cac667205f44b8d5e9fecd51f1 78 Hamap MF_01542 UPF0349 protein . 1 77 29.417 T 14-10-2018 IPR022916 Protein of unknown function UPF0349 GYO_3512 bd5bb5cac667205f44b8d5e9fecd51f1 78 ProDom PD058324 UPF0349 LMO2392 BLI03401/BL03152 SA0800 SAR0901 LIN2491 SERP0525 GK2958 BT9727_4649 BC4937 1 77 5.0E-39 T 14-10-2018 GYO_3512 bd5bb5cac667205f44b8d5e9fecd51f1 78 Pfam PF07293 Protein of unknown function (DUF1450) 1 75 1.0E-36 T 14-10-2018 IPR009910 Protein of unknown function DUF1450 GYO_2668 d6f799c45418aa971d5fdf78e25766ca 372 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 8 338 2.7E-115 T 14-10-2018 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 GYO_2668 d6f799c45418aa971d5fdf78e25766ca 372 Gene3D G3DSA:3.20.20.70 3 368 3.3E-106 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 GYO_2668 d6f799c45418aa971d5fdf78e25766ca 372 SUPERFAMILY SSF51395 5 340 1.01E-95 T 14-10-2018 GYO_3049 39bc924afc8e419fbe778f3032381445 178 Pfam PF01478 Type IV leader peptidase family 31 133 1.6E-16 T 14-10-2018 IPR000045 Prepilin type IV endopeptidase, peptidase domain GO:0004190|GO:0016020 GYO_0209 bdca13210fe7efd88b11f4ab9741223d 128 TIGRFAM TIGR01637 phage_arpU: phage transcriptional regulator, ArpU family 9 127 1.6E-24 T 14-10-2018 IPR006524 Transcription activator, ArpU family GYO_0288 bdca13210fe7efd88b11f4ab9741223d 128 TIGRFAM TIGR01637 phage_arpU: phage transcriptional regulator, ArpU family 9 127 1.6E-24 T 14-10-2018 IPR006524 Transcription activator, ArpU family GYO_3708 d8f24221e10bfe544afbbca5e7ca13ee 111 SUPERFAMILY SSF50729 3 89 2.46E-15 T 14-10-2018 GYO_3708 d8f24221e10bfe544afbbca5e7ca13ee 111 Gene3D G3DSA:1.10.287.210 5 90 1.4E-34 T 14-10-2018 GYO_3708 d8f24221e10bfe544afbbca5e7ca13ee 111 Pfam PF11724 YvbH-like oligomerisation region 32 88 1.4E-21 T 14-10-2018 IPR021722 Uncharacterised domain YvbH-like, oligomerisation domain GYO_3622 a088d15a7548dd049651beb82b875525 187 Gene3D G3DSA:1.20.1200.10 22 187 6.4E-68 T 14-10-2018 IPR036451 Cobalamin adenosyltransferase-like superfamily KEGG: 00860+2.5.1.17|Reactome: R-HSA-196741|Reactome: R-HSA-3359471 GYO_3622 a088d15a7548dd049651beb82b875525 187 ProDom PD007457 TRANSFERASE ADENOSYLTRANSFERASE COBALAMIN ATP:COBIALAMIN ADENOSYLTRANSFERASE PDUO TYPE RELATED ACIDURIA YVQK 9 180 2.0E-80 T 14-10-2018 IPR029499 ATP:cob(I)alamin adenosyltransferase, PduO-type KEGG: 00860+2.5.1.17|Reactome: R-HSA-196741|Reactome: R-HSA-3359471 GYO_3622 a088d15a7548dd049651beb82b875525 187 SUPERFAMILY SSF89028 1 179 1.37E-66 T 14-10-2018 IPR036451 Cobalamin adenosyltransferase-like superfamily KEGG: 00860+2.5.1.17|Reactome: R-HSA-196741|Reactome: R-HSA-3359471 GYO_3622 a088d15a7548dd049651beb82b875525 187 Pfam PF01923 Cobalamin adenosyltransferase 4 167 3.1E-57 T 14-10-2018 IPR016030 Cobalamin adenosyltransferase-like KEGG: 00860+2.5.1.17|Reactome: R-HSA-196741|Reactome: R-HSA-3359471 GYO_3622 a088d15a7548dd049651beb82b875525 187 TIGRFAM TIGR00636 PduO_Nterm: ATP:cob(I)alamin adenosyltransferase 4 179 1.4E-68 T 14-10-2018 IPR029499 ATP:cob(I)alamin adenosyltransferase, PduO-type KEGG: 00860+2.5.1.17|Reactome: R-HSA-196741|Reactome: R-HSA-3359471 GYO_1038 58bc8d3f634f3ee4045d71a6cce72108 649 Gene3D G3DSA:3.40.720.10 237 546 7.5E-83 T 14-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 GYO_1038 58bc8d3f634f3ee4045d71a6cce72108 649 SUPERFAMILY SSF53649 243 636 6.38E-76 T 14-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 GYO_1038 58bc8d3f634f3ee4045d71a6cce72108 649 PIRSF PIRSF005091 1 620 1.9E-187 T 14-10-2018 IPR012160 Lipoteichoic acid synthase-like GYO_1038 58bc8d3f634f3ee4045d71a6cce72108 649 Pfam PF00884 Sulfatase 245 536 6.7E-45 T 14-10-2018 IPR000917 Sulfatase, N-terminal GO:0008484 GYO_0835 8ca7955050a090250e5dc31523a549c8 128 Gene3D G3DSA:3.40.630.30 8 127 5.9E-18 T 14-10-2018 GYO_0835 8ca7955050a090250e5dc31523a549c8 128 SUPERFAMILY SSF55729 15 94 2.13E-13 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase GYO_0835 8ca7955050a090250e5dc31523a549c8 128 Pfam PF00583 Acetyltransferase (GNAT) family 15 87 9.6E-9 T 14-10-2018 IPR000182 GNAT domain GYO_3114 939d17cc61c62d32d327194bdc1fda0e 368 Pfam PF13556 PucR C-terminal helix-turn-helix domain 304 360 1.4E-18 T 14-10-2018 IPR025736 PucR C-terminal helix-turn-helix domain GYO_3114 939d17cc61c62d32d327194bdc1fda0e 368 Pfam PF05651 Putative sugar diacid recognition 4 136 5.7E-44 T 14-10-2018 IPR008599 Putative sugar diacid recognition GYO_3114 939d17cc61c62d32d327194bdc1fda0e 368 Gene3D G3DSA:1.10.10.2840 242 366 1.4E-19 T 14-10-2018 GYO_4279 baf204613585ce83666479767f40a346 560 Gene3D G3DSA:3.30.2010.10 316 404 1.3E-9 T 14-10-2018 GYO_4279 baf204613585ce83666479767f40a346 560 Pfam PF01435 Peptidase family M48 325 537 1.0E-13 T 14-10-2018 IPR001915 Peptidase M48 GO:0004222|GO:0006508 GYO_4474 74993be62baaa669520ce2442975c0d6 309 SUPERFAMILY SSF64182 1 306 2.88E-87 T 14-10-2018 IPR038763 DHH phosphoesterase superfamily GYO_4474 74993be62baaa669520ce2442975c0d6 309 Gene3D G3DSA:3.10.310.20 190 308 2.1E-39 T 14-10-2018 IPR038222 DHHA2 domain superfamily KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 GYO_4474 74993be62baaa669520ce2442975c0d6 309 Pfam PF02833 DHHA2 domain 183 306 7.0E-23 T 14-10-2018 IPR004097 DHHA2 domain GO:0005737|GO:0016462 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 GYO_4474 74993be62baaa669520ce2442975c0d6 309 Pfam PF01368 DHH family 3 146 1.9E-32 T 14-10-2018 IPR001667 DDH domain KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 GYO_4474 74993be62baaa669520ce2442975c0d6 309 Hamap MF_00207 Probable manganese-dependent inorganic pyrophosphatase [ppaC]. 3 309 49.191 T 14-10-2018 IPR022934 Manganese-dependent inorganic pyrophosphatase, probable GO:0004427 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 GYO_4474 74993be62baaa669520ce2442975c0d6 309 SMART SM01131 181 307 2.6E-57 T 14-10-2018 IPR004097 DHHA2 domain GO:0005737|GO:0016462 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 GYO_4474 74993be62baaa669520ce2442975c0d6 309 Gene3D G3DSA:3.90.1640.10 1 188 1.1E-85 T 14-10-2018 GYO_0787 672cbbc73447efd72dd008a0d84703d6 206 Pfam PF00881 Nitroreductase family 9 184 1.5E-27 T 14-10-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 GYO_0787 672cbbc73447efd72dd008a0d84703d6 206 Gene3D G3DSA:3.40.109.10 1 206 1.3E-63 T 14-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 GYO_0787 672cbbc73447efd72dd008a0d84703d6 206 SUPERFAMILY SSF55469 1 205 3.53E-49 T 14-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 GYO_1276 62a7a5eabf58266fb7b7fa3107f3ca73 405 Pfam PF00999 Sodium/hydrogen exchanger family 12 378 3.6E-62 T 14-10-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 GYO_1276 62a7a5eabf58266fb7b7fa3107f3ca73 405 Gene3D G3DSA:1.20.1530.20 2 386 5.7E-66 T 14-10-2018 IPR038770 Sodium/solute symporter superfamily GYO_2283 ef40979f28936677130affca146e92ac 78 Gene3D G3DSA:1.10.357.10 1 77 3.4E-9 T 14-10-2018 GYO_2283 ef40979f28936677130affca146e92ac 78 Pfam PF14278 Transcriptional regulator C-terminal region 6 55 4.9E-7 T 14-10-2018 IPR039532 Transcriptional regulator TetR, C-terminal, Firmicutes type GYO_1443 590cb1e1df0182da639a3c9d25e06b04 316 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 115 315 9.6E-45 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 GYO_1443 590cb1e1df0182da639a3c9d25e06b04 316 SUPERFAMILY SSF161098 90 303 2.49E-20 T 14-10-2018 IPR035906 MetI-like superfamily GYO_1443 590cb1e1df0182da639a3c9d25e06b04 316 Gene3D G3DSA:1.10.3720.10 86 310 4.9E-25 T 14-10-2018 IPR035906 MetI-like superfamily GYO_2702 566493dba57101606746c05bfaa6bc71 171 TIGRFAM TIGR02833 spore_III_AB: stage III sporulation protein AB 3 171 3.9E-70 T 14-10-2018 IPR014198 Stage III sporulation protein AB GYO_2702 566493dba57101606746c05bfaa6bc71 171 PIRSF PIRSF021435 1 171 5.4E-72 T 14-10-2018 IPR014198 Stage III sporulation protein AB GYO_2702 566493dba57101606746c05bfaa6bc71 171 Pfam PF09548 Stage III sporulation protein AB (spore_III_AB) 3 171 7.6E-53 T 14-10-2018 IPR014198 Stage III sporulation protein AB GYO_4407 ac3bd6321f8eeb17f4d9105d604e7936 382 Gene3D G3DSA:3.40.50.10350 1 362 9.9E-143 T 14-10-2018 IPR018197 Glycerate kinase, restriction-enzyme-like fold GYO_4407 ac3bd6321f8eeb17f4d9105d604e7936 382 TIGRFAM TIGR00045 TIGR00045: glycerate kinase 2 375 9.4E-161 T 14-10-2018 IPR004381 Glycerate kinase GO:0008887|GO:0031388 GYO_4407 ac3bd6321f8eeb17f4d9105d604e7936 382 SUPERFAMILY SSF110738 1 375 1.2E-142 T 14-10-2018 IPR036129 Glycerate kinase superfamily GO:0008887|GO:0031388 GYO_4407 ac3bd6321f8eeb17f4d9105d604e7936 382 Gene3D G3DSA:3.90.1510.10 42 276 9.9E-143 T 14-10-2018 IPR018193 Glycerate kinase, flavodoxin-like fold GO:0008887|GO:0031388 GYO_4407 ac3bd6321f8eeb17f4d9105d604e7936 382 Pfam PF02595 Glycerate kinase family 3 373 1.5E-150 T 14-10-2018 IPR004381 Glycerate kinase GO:0008887|GO:0031388 GYO_4407 ac3bd6321f8eeb17f4d9105d604e7936 382 PIRSF PIRSF006078 1 378 4.5E-145 T 14-10-2018 IPR004381 Glycerate kinase GO:0008887|GO:0031388 GYO_2000 b13fa909f59ad6d0c90884596595d208 209 SUPERFAMILY SSF103039 6 206 4.05E-49 T 14-10-2018 IPR028976 CheC-like superfamily GYO_2000 b13fa909f59ad6d0c90884596595d208 209 Gene3D G3DSA:3.40.1550.10 6 207 3.5E-58 T 14-10-2018 IPR028976 CheC-like superfamily GYO_2000 b13fa909f59ad6d0c90884596595d208 209 Pfam PF04509 CheC-like family 10 45 2.3E-13 T 14-10-2018 IPR007597 CheC-like protein GO:0016787 GYO_2000 b13fa909f59ad6d0c90884596595d208 209 Pfam PF04509 CheC-like family 111 147 4.3E-13 T 14-10-2018 IPR007597 CheC-like protein GO:0016787 GYO_1100 1891b29cf0a685d587dc2df41f7be732 311 SMART SM00382 26 209 2.2E-7 T 14-10-2018 IPR003593 AAA+ ATPase domain GYO_1100 1891b29cf0a685d587dc2df41f7be732 311 Gene3D G3DSA:3.40.50.300 1 233 3.3E-71 T 14-10-2018 GYO_1100 1891b29cf0a685d587dc2df41f7be732 311 SUPERFAMILY SSF52540 2 222 3.55E-66 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase GYO_1100 1891b29cf0a685d587dc2df41f7be732 311 Pfam PF00005 ABC transporter 18 160 7.7E-33 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 GYO_1100 1891b29cf0a685d587dc2df41f7be732 311 ProSitePatterns PS00211 ABC transporters family signature. 133 147 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 GYO_3007 4195bf604acef15d645996a8709cb2bc 518 Pfam PF14667 Polysaccharide biosynthesis C-terminal domain 360 500 1.2E-15 T 14-10-2018 IPR029303 Polysaccharide biosynthesis protein, C-terminal domain GYO_3007 4195bf604acef15d645996a8709cb2bc 518 TIGRFAM TIGR02900 spore_V_B: stage V sporulation protein B 6 494 5.7E-196 T 14-10-2018 IPR014249 Sporulation stage V protein B GYO_3007 4195bf604acef15d645996a8709cb2bc 518 PIRSF PIRSF038958 1 517 8.2E-204 T 14-10-2018 IPR024923 Peptidoglycan biosynthesis protein, SpoVB-type GYO_3007 4195bf604acef15d645996a8709cb2bc 518 Pfam PF01943 Polysaccharide biosynthesis protein 6 308 5.4E-71 T 14-10-2018 IPR002797 Polysaccharide biosynthesis protein GO:0016020 GYO_2190 6a44a778dd0aec4bb22e221fbf0eb39e 260 Gene3D G3DSA:1.10.12.10 202 259 2.7E-25 T 14-10-2018 IPR014748 Enoyl-CoA hydratase, C-terminal GYO_2190 6a44a778dd0aec4bb22e221fbf0eb39e 260 Gene3D G3DSA:3.90.226.10 3 201 1.9E-74 T 14-10-2018 GYO_2190 6a44a778dd0aec4bb22e221fbf0eb39e 260 SUPERFAMILY SSF52096 3 259 8.5E-88 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily GYO_2190 6a44a778dd0aec4bb22e221fbf0eb39e 260 Pfam PF00378 Enoyl-CoA hydratase/isomerase 11 258 2.7E-69 T 14-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 GYO_2190 6a44a778dd0aec4bb22e221fbf0eb39e 260 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 101 121 - T 14-10-2018 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824 GYO_4405 1f9e9655903974f9e02ef215d445a2de 525 Pfam PF00999 Sodium/hydrogen exchanger family 14 400 1.6E-67 T 14-10-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 GYO_4405 1f9e9655903974f9e02ef215d445a2de 525 TIGRFAM TIGR00831 a_cpa1: Na+/H+ antiporter 16 513 1.4E-84 T 14-10-2018 IPR004705 Cation/H+ exchanger, CPA1 family, bacteria GO:0006812|GO:0015299|GO:0016021 GYO_4405 1f9e9655903974f9e02ef215d445a2de 525 Gene3D G3DSA:1.20.1530.20 5 408 5.6E-12 T 14-10-2018 IPR038770 Sodium/solute symporter superfamily GYO_1697 e3ab814ce05a5b919d6bcbbcc061b25b 270 ProSitePatterns PS01307 Flagellar motor protein motA family signature. 186 203 - T 14-10-2018 IPR000540 Flagellar motor protein MotA, conserved site GYO_1697 e3ab814ce05a5b919d6bcbbcc061b25b 270 Pfam PF01618 MotA/TolQ/ExbB proton channel family 103 219 2.5E-27 T 14-10-2018 IPR002898 MotA/TolQ/ExbB proton channel GYO_1691 081224e0ebbfe9902b9953c57d02056f 85 Pfam PF09388 Spo0E like sporulation regulatory protein 10 50 6.2E-14 T 14-10-2018 IPR018540 Aspartyl-phosphate phosphatase Spo0E-like GO:0043937 GYO_1691 081224e0ebbfe9902b9953c57d02056f 85 Gene3D G3DSA:1.20.58.990 6 70 4.1E-10 T 14-10-2018 IPR037208 Aspartyl-phosphate phosphatase Spo0E-like superfamily GO:0043937 GYO_1691 081224e0ebbfe9902b9953c57d02056f 85 SUPERFAMILY SSF140500 6 59 8.24E-16 T 14-10-2018 IPR037208 Aspartyl-phosphate phosphatase Spo0E-like superfamily GO:0043937 GYO_4028 e901c3356ba4190db080e2b98a715a11 133 SUPERFAMILY SSF46785 5 129 9.37E-32 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily GYO_4028 e901c3356ba4190db080e2b98a715a11 133 Pfam PF02082 Transcriptional regulator 1 78 9.4E-19 T 14-10-2018 IPR000944 Transcription regulator Rrf2-type GYO_4028 e901c3356ba4190db080e2b98a715a11 133 Gene3D G3DSA:1.10.10.10 1 133 4.8E-58 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily GYO_1913 79f7457b90ca1f00c6b4bb0432507cdc 570 Gene3D G3DSA:3.40.970.40 242 289 3.4E-21 T 14-10-2018 GYO_1913 79f7457b90ca1f00c6b4bb0432507cdc 570 Pfam PF05670 Domain of unknown function (DUF814) 455 538 2.6E-29 T 14-10-2018 IPR008532 Domain of unknown function DUF814 GYO_1913 79f7457b90ca1f00c6b4bb0432507cdc 570 Gene3D G3DSA:1.10.8.50 168 237 7.6E-28 T 14-10-2018 GYO_1913 79f7457b90ca1f00c6b4bb0432507cdc 570 Gene3D G3DSA:2.30.310.10 1 167 4.6E-69 T 14-10-2018 GYO_1913 79f7457b90ca1f00c6b4bb0432507cdc 570 Pfam PF05833 Fibronectin-binding protein A N-terminus (FbpA) 4 444 5.4E-168 T 14-10-2018 GYO_4511 4667c76820e4d3ce9c2f38bd56d7bf16 282 Gene3D G3DSA:3.90.1530.30 37 99 6.2E-28 T 14-10-2018 GYO_4511 4667c76820e4d3ce9c2f38bd56d7bf16 282 Pfam PF02195 ParB-like nuclease domain 24 112 6.2E-25 T 14-10-2018 IPR003115 ParB/Sulfiredoxin GYO_4511 4667c76820e4d3ce9c2f38bd56d7bf16 282 Gene3D G3DSA:1.10.10.2830 100 214 3.8E-37 T 14-10-2018 GYO_4511 4667c76820e4d3ce9c2f38bd56d7bf16 282 TIGRFAM TIGR00180 parB_part: ParB/RepB/Spo0J family partition protein 20 199 1.8E-67 T 14-10-2018 IPR004437 ParB/RepB/Spo0J partition protein family GO:0003677 GYO_4511 4667c76820e4d3ce9c2f38bd56d7bf16 282 SMART SM00470 24 113 2.2E-36 T 14-10-2018 IPR003115 ParB/Sulfiredoxin GYO_4511 4667c76820e4d3ce9c2f38bd56d7bf16 282 SUPERFAMILY SSF109709 106 216 6.8E-35 T 14-10-2018 GYO_4511 4667c76820e4d3ce9c2f38bd56d7bf16 282 SUPERFAMILY SSF110849 24 115 3.14E-27 T 14-10-2018 IPR036086 ParB/Sulfiredoxin superfamily GYO_0599 1e49b52f4214ca0b000f12215c09df99 318 SUPERFAMILY SSF53807 44 305 1.45E-68 T 14-10-2018 GYO_0599 1e49b52f4214ca0b000f12215c09df99 318 Gene3D G3DSA:3.40.50.12260 188 290 3.3E-108 T 14-10-2018 GYO_0599 1e49b52f4214ca0b000f12215c09df99 318 Gene3D G3DSA:3.40.50.12250 49 301 3.3E-108 T 14-10-2018 GYO_0599 1e49b52f4214ca0b000f12215c09df99 318 Pfam PF01497 Periplasmic binding protein 58 292 5.6E-38 T 14-10-2018 IPR002491 ABC transporter periplasmic binding domain GYO_2258 dbf70f9a2419b9e4cddc0eef3fc31094 74 SUPERFAMILY SSF47413 1 69 2.0E-19 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 GYO_2258 dbf70f9a2419b9e4cddc0eef3fc31094 74 SMART SM00530 6 62 4.3E-7 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 GYO_2258 dbf70f9a2419b9e4cddc0eef3fc31094 74 Gene3D G3DSA:1.10.260.40 6 74 3.5E-10 T 14-10-2018 GYO_2258 dbf70f9a2419b9e4cddc0eef3fc31094 74 Pfam PF13443 Cro/C1-type HTH DNA-binding domain 6 67 1.2E-23 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 GYO_1564 51f6ec98045fa2216d41877736b2fa0e 207 SUPERFAMILY SSF52540 41 194 1.09E-17 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase GYO_1564 51f6ec98045fa2216d41877736b2fa0e 207 Gene3D G3DSA:3.40.50.300 2 190 2.6E-38 T 14-10-2018 GYO_1564 51f6ec98045fa2216d41877736b2fa0e 207 Pfam PF01695 IstB-like ATP binding protein 57 169 1.6E-10 T 14-10-2018 IPR002611 IstB-like ATP-binding protein GO:0005524 GYO_1564 51f6ec98045fa2216d41877736b2fa0e 207 SMART SM00382 57 183 2.9E-7 T 14-10-2018 IPR003593 AAA+ ATPase domain GYO_1105 44645d41f1d204773a79bd0e150cc26c 210 Gene3D G3DSA:3.40.50.1820 31 210 8.0E-51 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold GYO_1105 44645d41f1d204773a79bd0e150cc26c 210 Pfam PF01674 Lipase (class 2) 33 126 3.2E-14 T 14-10-2018 IPR002918 Lipase EstA/Esterase EstB GO:0016787 KEGG: 00561+3.1.1.3|MetaCyc: PWY-6857 GYO_1105 44645d41f1d204773a79bd0e150cc26c 210 SUPERFAMILY SSF53474 33 188 2.7E-22 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold GYO_2998 82d6a3303335f535355f7e675ce54510 560 Pfam PF01520 N-acetylmuramoyl-L-alanine amidase 388 556 2.5E-44 T 14-10-2018 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 GYO_2998 82d6a3303335f535355f7e675ce54510 560 PIRSF PIRSF037846 44 244 2.5E-73 T 14-10-2018 IPR017293 N-acetylmuramoyl-L-alanine amidase, YrvJ, predicted MetaCyc: PWY-7883 GYO_2998 82d6a3303335f535355f7e675ce54510 560 PIRSF PIRSF037846 227 560 2.3E-153 T 14-10-2018 IPR017293 N-acetylmuramoyl-L-alanine amidase, YrvJ, predicted MetaCyc: PWY-7883 GYO_2998 82d6a3303335f535355f7e675ce54510 560 Pfam PF08239 Bacterial SH3 domain 83 130 8.0E-10 T 14-10-2018 IPR003646 SH3-like domain, bacterial-type GYO_2998 82d6a3303335f535355f7e675ce54510 560 Pfam PF08239 Bacterial SH3 domain 308 359 1.4E-11 T 14-10-2018 IPR003646 SH3-like domain, bacterial-type GYO_2998 82d6a3303335f535355f7e675ce54510 560 Pfam PF08239 Bacterial SH3 domain 231 281 1.1E-13 T 14-10-2018 IPR003646 SH3-like domain, bacterial-type GYO_2998 82d6a3303335f535355f7e675ce54510 560 Pfam PF08239 Bacterial SH3 domain 155 203 9.1E-14 T 14-10-2018 IPR003646 SH3-like domain, bacterial-type GYO_2998 82d6a3303335f535355f7e675ce54510 560 Gene3D G3DSA:2.30.30.40 295 364 5.7E-15 T 14-10-2018 GYO_2998 82d6a3303335f535355f7e675ce54510 560 Gene3D G3DSA:2.30.30.40 66 137 4.6E-17 T 14-10-2018 GYO_2998 82d6a3303335f535355f7e675ce54510 560 Gene3D G3DSA:2.30.30.40 215 284 7.1E-17 T 14-10-2018 GYO_2998 82d6a3303335f535355f7e675ce54510 560 SUPERFAMILY SSF53187 385 559 2.61E-51 T 14-10-2018 GYO_2998 82d6a3303335f535355f7e675ce54510 560 SMART SM00287 300 362 1.0E-16 T 14-10-2018 IPR003646 SH3-like domain, bacterial-type GYO_2998 82d6a3303335f535355f7e675ce54510 560 SMART SM00287 145 207 7.3E-17 T 14-10-2018 IPR003646 SH3-like domain, bacterial-type GYO_2998 82d6a3303335f535355f7e675ce54510 560 SMART SM00287 72 134 1.8E-19 T 14-10-2018 IPR003646 SH3-like domain, bacterial-type GYO_2998 82d6a3303335f535355f7e675ce54510 560 SMART SM00287 223 285 1.3E-15 T 14-10-2018 IPR003646 SH3-like domain, bacterial-type GYO_2998 82d6a3303335f535355f7e675ce54510 560 SMART SM00646 447 556 1.1E-37 T 14-10-2018 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 GYO_2998 82d6a3303335f535355f7e675ce54510 560 Gene3D G3DSA:2.30.30.40 147 204 8.5E-18 T 14-10-2018 GYO_2998 82d6a3303335f535355f7e675ce54510 560 Gene3D G3DSA:3.40.630.40 383 560 1.3E-52 T 14-10-2018 GYO_0176 5cb211040482cc10dc00c3929e2ca646 130 Hamap MF_00532_B 30S ribosomal protein S9 [rpsI]. 1 130 35.294 T 14-10-2018 IPR023035 Ribosomal protein S9, bacterial/plastid GYO_0176 5cb211040482cc10dc00c3929e2ca646 130 SUPERFAMILY SSF54211 5 130 1.25E-48 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold GYO_0176 5cb211040482cc10dc00c3929e2ca646 130 ProSitePatterns PS00360 Ribosomal protein S9 signature. 69 87 - T 14-10-2018 IPR020574 Ribosomal protein S9, conserved site GO:0003735|GO:0005840|GO:0006412 GYO_0176 5cb211040482cc10dc00c3929e2ca646 130 Gene3D G3DSA:3.30.230.10 1 130 1.1E-52 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup GYO_0176 5cb211040482cc10dc00c3929e2ca646 130 Pfam PF00380 Ribosomal protein S9/S16 10 130 5.8E-47 T 14-10-2018 IPR000754 Ribosomal protein S9 GO:0003735|GO:0005840|GO:0006412 GYO_2043 9e8e8c541dd770b51a527d2dd859690e 85 Gene3D G3DSA:1.10.760.20 1 82 5.0E-31 T 14-10-2018 IPR038292 YmfJ/YflH superfamily GYO_2043 9e8e8c541dd770b51a527d2dd859690e 85 Pfam PF11588 Protein of unknown function (DUF3243) 2 80 3.1E-34 T 14-10-2018 IPR021637 Protein of unknown function DUF3243 GYO_2043 9e8e8c541dd770b51a527d2dd859690e 85 PIRSF PIRSF004764 1 85 1.4E-27 T 14-10-2018 IPR024702 Uncharacterised conserved protein YmfJ GYO_2764 573839de5f509969ec3b2e2b2b92dee8 300 TIGRFAM TIGR02136 ptsS_2: phosphate binding protein 1 286 2.7E-85 T 14-10-2018 IPR011862 Phosphate binding protein GO:0042301 GYO_2764 573839de5f509969ec3b2e2b2b92dee8 300 Gene3D G3DSA:3.40.190.10 120 242 9.6E-89 T 14-10-2018 GYO_2764 573839de5f509969ec3b2e2b2b92dee8 300 SUPERFAMILY SSF53850 46 294 3.06E-75 T 14-10-2018 GYO_2764 573839de5f509969ec3b2e2b2b92dee8 300 Gene3D G3DSA:3.40.190.10 48 286 9.6E-89 T 14-10-2018 GYO_2764 573839de5f509969ec3b2e2b2b92dee8 300 Pfam PF12849 PBP superfamily domain 36 271 6.0E-44 T 14-10-2018 IPR024370 PBP domain GYO_2510 21c6b65320a4181ba60ffe25df31d854 242 ProDom PD119161 YPHF BH1644 PROTEINS PRECURSOR ORF1 RBL05088 SIGNAL SIMILAR 16 239 8.0E-126 T 14-10-2018 GYO_0981 befcd9f57002fba749552ebb1ecccb26 308 SUPERFAMILY SSF103481 192 294 4.45E-16 T 14-10-2018 GYO_0981 befcd9f57002fba749552ebb1ecccb26 308 SUPERFAMILY SSF103481 40 143 2.22E-14 T 14-10-2018 GYO_0981 befcd9f57002fba749552ebb1ecccb26 308 Pfam PF00892 EamA-like transporter family 8 140 2.9E-24 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 GYO_0981 befcd9f57002fba749552ebb1ecccb26 308 Pfam PF00892 EamA-like transporter family 155 291 6.7E-24 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 GYO_0761 437bcbfe753558ea094957e229318ba2 435 Pfam PF02040 Arsenical pump membrane protein 6 428 6.5E-270 T 14-10-2018 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 GYO_0761 437bcbfe753558ea094957e229318ba2 435 PRINTS PR00758 Arsenical pump membrane protein signature 220 245 1.4E-113 T 14-10-2018 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 GYO_0761 437bcbfe753558ea094957e229318ba2 435 PRINTS PR00758 Arsenical pump membrane protein signature 281 305 1.4E-113 T 14-10-2018 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 GYO_0761 437bcbfe753558ea094957e229318ba2 435 PRINTS PR00758 Arsenical pump membrane protein signature 147 171 1.4E-113 T 14-10-2018 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 GYO_0761 437bcbfe753558ea094957e229318ba2 435 PRINTS PR00758 Arsenical pump membrane protein signature 104 128 1.4E-113 T 14-10-2018 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 GYO_0761 437bcbfe753558ea094957e229318ba2 435 PRINTS PR00758 Arsenical pump membrane protein signature 326 348 1.4E-113 T 14-10-2018 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 GYO_0761 437bcbfe753558ea094957e229318ba2 435 PRINTS PR00758 Arsenical pump membrane protein signature 367 392 1.4E-113 T 14-10-2018 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 GYO_0761 437bcbfe753558ea094957e229318ba2 435 PRINTS PR00758 Arsenical pump membrane protein signature 180 203 1.4E-113 T 14-10-2018 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 GYO_0761 437bcbfe753558ea094957e229318ba2 435 PRINTS PR00758 Arsenical pump membrane protein signature 400 424 1.4E-113 T 14-10-2018 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 GYO_0761 437bcbfe753558ea094957e229318ba2 435 TIGRFAM TIGR00935 2a45: arsenite/antimonite efflux pump membrane protein 5 430 2.6E-227 T 14-10-2018 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 GYO_1019 49d235579caf24dc97a08ffb258fb408 115 Pfam PF11181 Heat induced stress protein YflT 5 104 7.7E-32 T 14-10-2018 IPR025889 General stress protein 17M-like domain GYO_2734 9ca9384cdec9c81d2d0e90f2a8d36337 345 Gene3D G3DSA:1.20.81.30 198 310 1.7E-15 T 14-10-2018 GYO_2734 9ca9384cdec9c81d2d0e90f2a8d36337 345 Pfam PF00482 Type II secretion system (T2SS), protein F 215 337 6.3E-23 T 14-10-2018 IPR018076 Type II secretion system F domain GYO_2734 9ca9384cdec9c81d2d0e90f2a8d36337 345 Pfam PF00482 Type II secretion system (T2SS), protein F 17 136 1.7E-11 T 14-10-2018 IPR018076 Type II secretion system F domain GYO_2734 9ca9384cdec9c81d2d0e90f2a8d36337 345 Gene3D G3DSA:1.20.81.30 3 112 2.1E-10 T 14-10-2018 GYO_2734 9ca9384cdec9c81d2d0e90f2a8d36337 345 ProSitePatterns PS00874 Bacterial type II secretion system protein F signature. 108 136 - T 14-10-2018 IPR001992 Type II secretion system conserved site GO:0009306|GO:0016020 GYO_2091 8bee7635aab0e2a3e082b059b52ce0e3 314 TIGRFAM TIGR00174 miaA: tRNA dimethylallyltransferase 8 293 1.5E-127 T 14-10-2018 IPR018022 IPP transferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781|Reactome: R-HSA-6782315|Reactome: R-HSA-6787450 GYO_2091 8bee7635aab0e2a3e082b059b52ce0e3 314 Gene3D G3DSA:1.10.20.140 115 187 1.9E-105 T 14-10-2018 GYO_2091 8bee7635aab0e2a3e082b059b52ce0e3 314 Hamap MF_00185 tRNA dimethylallyltransferase [miaA]. 8 313 30.492 T 14-10-2018 IPR018022 IPP transferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781|Reactome: R-HSA-6782315|Reactome: R-HSA-6787450 GYO_2091 8bee7635aab0e2a3e082b059b52ce0e3 314 SUPERFAMILY SSF52540 5 237 1.35E-13 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase GYO_2091 8bee7635aab0e2a3e082b059b52ce0e3 314 Gene3D G3DSA:3.40.50.300 12 290 1.9E-105 T 14-10-2018 GYO_2091 8bee7635aab0e2a3e082b059b52ce0e3 314 SUPERFAMILY SSF52540 9 154 4.53E-19 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase GYO_2091 8bee7635aab0e2a3e082b059b52ce0e3 314 Pfam PF01715 IPP transferase 41 285 8.6E-85 T 14-10-2018 IPR018022 IPP transferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781|Reactome: R-HSA-6782315|Reactome: R-HSA-6787450 GYO_2273 451abf5b18c4f6eafc38ba0c8ad4af39 167 SUPERFAMILY SSF109854 8 152 2.75E-33 T 14-10-2018 IPR034660 DinB/YfiT-like putative metalloenzymes GYO_2273 451abf5b18c4f6eafc38ba0c8ad4af39 167 Pfam PF05163 DinB family 4 160 1.1E-42 T 14-10-2018 IPR007837 DNA damage-inducible protein DinB GYO_2273 451abf5b18c4f6eafc38ba0c8ad4af39 167 Gene3D G3DSA:1.20.120.450 1 150 1.7E-42 T 14-10-2018 IPR034660 DinB/YfiT-like putative metalloenzymes GYO_2429 f6a68fbf88527f3a23587b51e82c8163 168 Gene3D G3DSA:1.20.120.1630 1 166 6.2E-23 T 14-10-2018 GYO_2429 f6a68fbf88527f3a23587b51e82c8163 168 Pfam PF04140 Isoprenylcysteine carboxyl methyltransferase (ICMT) family 76 163 6.7E-29 T 14-10-2018 IPR007269 Isoprenylcysteine carboxyl methyltransferase GO:0004671|GO:0006481|GO:0016021 Reactome: R-HSA-163841 GYO_0763 c59412ccabc1844380a1e55b69c136fc 259 Gene3D G3DSA:3.40.630.30 114 245 1.2E-37 T 14-10-2018 GYO_0763 c59412ccabc1844380a1e55b69c136fc 259 Pfam PF12746 GNAT acetyltransferase 14 254 2.3E-63 T 14-10-2018 IPR027365 GNAT acetyltransferase YdfB-like GYO_0763 c59412ccabc1844380a1e55b69c136fc 259 SUPERFAMILY SSF55729 119 253 3.84E-15 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase GYO_0141 ac4827e782fb691a114e2671b7c333ee 318 SUPERFAMILY SSF53474 26 311 3.82E-40 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold GYO_0141 ac4827e782fb691a114e2671b7c333ee 318 PRINTS PR00793 Prolyl aminopeptidase (S33) family signature 35 43 1.6E-10 T 14-10-2018 IPR002410 Peptidase S33 GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 GYO_0141 ac4827e782fb691a114e2671b7c333ee 318 PRINTS PR00793 Prolyl aminopeptidase (S33) family signature 63 74 1.6E-10 T 14-10-2018 IPR002410 Peptidase S33 GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 GYO_0141 ac4827e782fb691a114e2671b7c333ee 318 PRINTS PR00793 Prolyl aminopeptidase (S33) family signature 111 125 1.6E-10 T 14-10-2018 IPR002410 Peptidase S33 GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 GYO_0141 ac4827e782fb691a114e2671b7c333ee 318 Pfam PF00561 alpha/beta hydrolase fold 33 303 1.9E-19 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 GYO_0141 ac4827e782fb691a114e2671b7c333ee 318 Gene3D G3DSA:3.40.50.1820 12 314 1.7E-43 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold GYO_2454 e7534b240907991fe1661f6150df1a3a 81 ProDom PD059812 YPPD 1 69 1.0E-28 T 14-10-2018 IPR020252 Protein of unknown function DUF5446 GYO_2454 e7534b240907991fe1661f6150df1a3a 81 Pfam PF17522 Family of unknown function (DUF5446) 1 72 1.6E-31 T 14-10-2018 IPR020252 Protein of unknown function DUF5446 GYO_1547 1c5d40e7aac7057bfdccbcec50d11f04 480 SUPERFAMILY SSF51735 11 267 1.22E-73 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily GYO_1547 1c5d40e7aac7057bfdccbcec50d11f04 480 Pfam PF08125 Mannitol dehydrogenase C-terminal domain 204 445 1.5E-51 T 14-10-2018 IPR013118 Mannitol dehydrogenase, C-terminal GO:0016491|GO:0050662|GO:0055114 GYO_1547 1c5d40e7aac7057bfdccbcec50d11f04 480 Gene3D G3DSA:3.40.50.720 2 268 4.6E-55 T 14-10-2018 GYO_1547 1c5d40e7aac7057bfdccbcec50d11f04 480 Gene3D G3DSA:1.10.1040.10 272 474 1.6E-54 T 14-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 GYO_1547 1c5d40e7aac7057bfdccbcec50d11f04 480 Hamap MF_00670 Altronate oxidoreductase [uxaB]. 1 473 57.691 T 14-10-2018 IPR023668 Altronate oxidoreductase GO:0009026|GO:0055114 KEGG: 00040+1.1.1.58 GYO_1547 1c5d40e7aac7057bfdccbcec50d11f04 480 PRINTS PR00084 Mannitol dehydrogenase signature 205 218 2.2E-5 T 14-10-2018 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 GYO_1547 1c5d40e7aac7057bfdccbcec50d11f04 480 PRINTS PR00084 Mannitol dehydrogenase signature 235 250 2.2E-5 T 14-10-2018 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 GYO_1547 1c5d40e7aac7057bfdccbcec50d11f04 480 PRINTS PR00084 Mannitol dehydrogenase signature 19 29 2.2E-5 T 14-10-2018 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 GYO_1547 1c5d40e7aac7057bfdccbcec50d11f04 480 Pfam PF01232 Mannitol dehydrogenase Rossmann domain 18 172 3.1E-19 T 14-10-2018 IPR013131 Mannitol dehydrogenase, N-terminal GO:0016491|GO:0055114 GYO_1547 1c5d40e7aac7057bfdccbcec50d11f04 480 SUPERFAMILY SSF48179 273 473 7.14E-46 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 GYO_1928 e97bcb63ada8853c036a0994681c944a 648 Pfam PF03793 PASTA domain 360 423 1.1E-10 T 14-10-2018 IPR005543 PASTA domain GYO_1928 e97bcb63ada8853c036a0994681c944a 648 Pfam PF03793 PASTA domain 430 491 3.5E-17 T 14-10-2018 IPR005543 PASTA domain GYO_1928 e97bcb63ada8853c036a0994681c944a 648 Pfam PF03793 PASTA domain 498 558 8.6E-14 T 14-10-2018 IPR005543 PASTA domain GYO_1928 e97bcb63ada8853c036a0994681c944a 648 Pfam PF00069 Protein kinase domain 11 261 3.4E-57 T 14-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 GYO_1928 e97bcb63ada8853c036a0994681c944a 648 SUPERFAMILY SSF56112 8 265 3.78E-85 T 14-10-2018 IPR011009 Protein kinase-like domain superfamily GYO_1928 e97bcb63ada8853c036a0994681c944a 648 ProSitePatterns PS00107 Protein kinases ATP-binding region signature. 17 40 - T 14-10-2018 IPR017441 Protein kinase, ATP binding site GO:0005524 GYO_1928 e97bcb63ada8853c036a0994681c944a 648 SMART SM00740 356 424 2.9E-15 T 14-10-2018 IPR005543 PASTA domain GYO_1928 e97bcb63ada8853c036a0994681c944a 648 SMART SM00740 425 492 1.5E-19 T 14-10-2018 IPR005543 PASTA domain GYO_1928 e97bcb63ada8853c036a0994681c944a 648 SMART SM00740 493 559 7.4E-19 T 14-10-2018 IPR005543 PASTA domain GYO_1928 e97bcb63ada8853c036a0994681c944a 648 Gene3D G3DSA:3.30.10.20 357 425 3.7E-13 T 14-10-2018 GYO_1928 e97bcb63ada8853c036a0994681c944a 648 Gene3D G3DSA:3.30.10.20 426 493 4.3E-19 T 14-10-2018 GYO_1928 e97bcb63ada8853c036a0994681c944a 648 Gene3D G3DSA:3.30.200.20 1 90 2.3E-33 T 14-10-2018 GYO_1928 e97bcb63ada8853c036a0994681c944a 648 Gene3D G3DSA:2.60.40.2560 566 644 7.3E-16 T 14-10-2018 GYO_1928 e97bcb63ada8853c036a0994681c944a 648 ProSitePatterns PS00108 Serine/Threonine protein kinases active-site signature. 130 142 - T 14-10-2018 IPR008271 Serine/threonine-protein kinase, active site GO:0004672|GO:0006468 GYO_1928 e97bcb63ada8853c036a0994681c944a 648 Gene3D G3DSA:1.10.510.10 92 278 6.9E-55 T 14-10-2018 GYO_1928 e97bcb63ada8853c036a0994681c944a 648 SMART SM00220 11 271 2.5E-78 T 14-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 GYO_1928 e97bcb63ada8853c036a0994681c944a 648 Gene3D G3DSA:3.30.10.20 497 561 2.2E-15 T 14-10-2018 GYO_0095 964d83cb4d21f9578dafa8ad5109d253 333 SUPERFAMILY SSF51395 11 318 5.13E-91 T 14-10-2018 GYO_0095 964d83cb4d21f9578dafa8ad5109d253 333 ProSitePatterns PS01136 Uncharacterized protein family UPF0034 signature. 96 114 - T 14-10-2018 IPR018517 tRNA-dihydrouridine synthase, conserved site GO:0008033|GO:0017150|GO:0050660|GO:0055114 GYO_0095 964d83cb4d21f9578dafa8ad5109d253 333 PIRSF PIRSF006621 1 331 4.9E-111 T 14-10-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 GYO_0095 964d83cb4d21f9578dafa8ad5109d253 333 TIGRFAM TIGR00737 nifR3_yhdG: putative TIM-barrel protein, nifR3 family 4 322 1.2E-144 T 14-10-2018 IPR004652 tRNA-dihydrouridine synthase, TIM-barrel, NifR3 GO:0008033|GO:0016491|GO:0050660|GO:0055114 GYO_0095 964d83cb4d21f9578dafa8ad5109d253 333 Gene3D G3DSA:3.20.20.70 7 251 7.9E-83 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 GYO_0095 964d83cb4d21f9578dafa8ad5109d253 333 Gene3D G3DSA:1.10.1200.80 253 331 7.6E-19 T 14-10-2018 IPR024036 tRNA-dihydrouridine synthase, putative, C-terminal GO:0016491|GO:0055114 GYO_0095 964d83cb4d21f9578dafa8ad5109d253 333 Pfam PF01207 Dihydrouridine synthase (Dus) 14 320 9.8E-116 T 14-10-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 GYO_2445 2aeedf6b589d489e4457b1247fe8648a 181 Hamap MF_01575 UPF0398 protein . 1 177 35.98 T 14-10-2018 IPR010697 Protein of unknown function DUF1273 GYO_2445 2aeedf6b589d489e4457b1247fe8648a 181 Pfam PF06908 Protein of unknown function (DUF1273) 4 171 7.4E-71 T 14-10-2018 IPR010697 Protein of unknown function DUF1273 GYO_2445 2aeedf6b589d489e4457b1247fe8648a 181 SUPERFAMILY SSF102405 1 177 1.01E-64 T 14-10-2018 GYO_2445 2aeedf6b589d489e4457b1247fe8648a 181 PIRSF PIRSF021290 1 179 1.1E-72 T 14-10-2018 IPR010697 Protein of unknown function DUF1273 GYO_2445 2aeedf6b589d489e4457b1247fe8648a 181 Gene3D G3DSA:3.40.50.450 1 180 3.9E-71 T 14-10-2018 GYO_4429 d114e7775c7b90f7fc271e95b4a6b71d 680 Pfam PF13175 AAA ATPase domain 5 373 2.8E-21 T 14-10-2018 GYO_4429 d114e7775c7b90f7fc271e95b4a6b71d 680 SUPERFAMILY SSF52540 1 378 2.08E-20 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase GYO_4429 d114e7775c7b90f7fc271e95b4a6b71d 680 Gene3D G3DSA:3.40.50.300 2 397 4.9E-21 T 14-10-2018 GYO_2850 321720eca17d4e873d1050218ebc63a4 96 SUPERFAMILY SSF55298 2 93 1.4E-24 T 14-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 GYO_2850 321720eca17d4e873d1050218ebc63a4 96 Gene3D G3DSA:3.30.1330.40 1 95 6.7E-25 T 14-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 GYO_2850 321720eca17d4e873d1050218ebc63a4 96 Pfam PF01042 Endoribonuclease L-PSP 2 90 1.8E-18 T 14-10-2018 IPR006175 YjgF/YER057c/UK114 family Reactome: R-HSA-8849175 GYO_3672 5e963c317294b761a3e05feffce4afb9 133 Pfam PF17314 Family of unknown function (DUF5360) 4 128 1.9E-57 T 14-10-2018 IPR020348 Uncharacterised protein family YvaD GYO_3672 5e963c317294b761a3e05feffce4afb9 133 ProDom PD082409 MEMBRANE YVAD TRANSMEMBRANE 1 120 3.0E-62 T 14-10-2018 IPR020348 Uncharacterised protein family YvaD GYO_2096 12e4b4680053f8f7f6ed31bfd682a7ef 130 Hamap MF_00128 Protein NrdI [nrdI]. 2 122 27.199 T 14-10-2018 IPR020852 Ribonucleotide reductase, class Ib, NrdI, bacterial GYO_2096 12e4b4680053f8f7f6ed31bfd682a7ef 130 TIGRFAM TIGR00333 nrdI: nrdI protein 4 125 7.6E-49 T 14-10-2018 IPR004465 Ribonucleotide reductase Class Ib, NrdI GYO_2096 12e4b4680053f8f7f6ed31bfd682a7ef 130 Pfam PF07972 NrdI Flavodoxin like 4 112 3.2E-31 T 14-10-2018 IPR004465 Ribonucleotide reductase Class Ib, NrdI GYO_2096 12e4b4680053f8f7f6ed31bfd682a7ef 130 SUPERFAMILY SSF52218 2 121 3.03E-23 T 14-10-2018 IPR029039 Flavoprotein-like superfamily GYO_2096 12e4b4680053f8f7f6ed31bfd682a7ef 130 PIRSF PIRSF005087 1 126 4.7E-39 T 14-10-2018 IPR004465 Ribonucleotide reductase Class Ib, NrdI GYO_2096 12e4b4680053f8f7f6ed31bfd682a7ef 130 Gene3D G3DSA:3.40.50.360 1 130 6.7E-47 T 14-10-2018 IPR029039 Flavoprotein-like superfamily GYO_4558 185bd997ac8354758096d44f47e5a8f3 436 PIRSF PIRSF005353 1 436 2.8E-173 T 14-10-2018 IPR026033 Purine permease PbuG-like GYO_4558 185bd997ac8354758096d44f47e5a8f3 436 Pfam PF00860 Permease family 17 399 7.7E-86 T 14-10-2018 IPR006043 Xanthine/uracil/vitamin C permease GO:0016020|GO:0022857|GO:0055085 GYO_2970 c74517a941e2ca5a0f4f2aa980065d35 213 Pfam PF07423 Protein of unknown function (DUF1510) 1 212 2.9E-72 T 14-10-2018 IPR009988 Protein of unknown function DUF1510 GYO_2240 ab2b5f04a775f52bfe8be3f27fed2b42 97 Pfam PF13217 Protein of unknown function (DUF4025) 50 97 3.8E-25 T 14-10-2018 IPR025100 Protein of unknown function DUF4025 GYO_3552 04cd38b3be268f7eca0945a16914afc1 143 SUPERFAMILY SSF52418 68 137 1.57E-8 T 14-10-2018 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 GYO_3552 04cd38b3be268f7eca0945a16914afc1 143 Gene3D G3DSA:1.20.970.10 1 61 5.4E-17 T 14-10-2018 GYO_3552 04cd38b3be268f7eca0945a16914afc1 143 Gene3D G3DSA:3.40.1030.10 65 122 1.2E-7 T 14-10-2018 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 GYO_3552 04cd38b3be268f7eca0945a16914afc1 143 Pfam PF02885 Glycosyl transferase family, helical bundle domain 12 58 1.4E-10 T 14-10-2018 IPR017459 Glycosyl transferase family 3, N-terminal domain Reactome: R-HSA-73614|Reactome: R-HSA-73621 GYO_3552 04cd38b3be268f7eca0945a16914afc1 143 SUPERFAMILY SSF47648 5 58 5.76E-13 T 14-10-2018 IPR036320 Glycosyl transferase family 3, N-terminal domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 GYO_0015 898e313d94966a2fd3c3f4d7c53b07d8 294 Pfam PF01680 SOR/SNZ family 7 212 1.3E-106 T 14-10-2018 IPR033755 PdxS/SNZ N-terminal domain KEGG: 00750+4.3.3.6|MetaCyc: PWY-6466 GYO_0015 898e313d94966a2fd3c3f4d7c53b07d8 294 Gene3D G3DSA:3.20.20.70 1 294 1.2E-148 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 GYO_0015 898e313d94966a2fd3c3f4d7c53b07d8 294 Hamap MF_01824 Pyridoxal 5'-phosphate synthase subunit PdxS [pdxS]. 4 294 53.876 T 14-10-2018 IPR001852 Pyridoxal 5'-phosphate synthase subunit PdxS/SNZ GO:0042819|GO:0042823 KEGG: 00750+4.3.3.6|MetaCyc: PWY-6466 GYO_0015 898e313d94966a2fd3c3f4d7c53b07d8 294 ProSitePatterns PS01235 PdxS/SNZ family signature. 205 223 - T 14-10-2018 IPR001852 Pyridoxal 5'-phosphate synthase subunit PdxS/SNZ GO:0042819|GO:0042823 KEGG: 00750+4.3.3.6|MetaCyc: PWY-6466 GYO_0015 898e313d94966a2fd3c3f4d7c53b07d8 294 SUPERFAMILY SSF51366 18 269 1.27E-69 T 14-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 GYO_0015 898e313d94966a2fd3c3f4d7c53b07d8 294 TIGRFAM TIGR00343 TIGR00343: pyridoxal 5'-phosphate synthase, synthase subunit Pdx1 9 294 7.8E-161 T 14-10-2018 IPR001852 Pyridoxal 5'-phosphate synthase subunit PdxS/SNZ GO:0042819|GO:0042823 KEGG: 00750+4.3.3.6|MetaCyc: PWY-6466 GYO_0015 898e313d94966a2fd3c3f4d7c53b07d8 294 PIRSF PIRSF029271 1 294 7.2E-154 T 14-10-2018 IPR001852 Pyridoxal 5'-phosphate synthase subunit PdxS/SNZ GO:0042819|GO:0042823 KEGG: 00750+4.3.3.6|MetaCyc: PWY-6466 GYO_3117 d0ac89d95aaa7962277b65b68db9d180 126 Pfam PF12681 Glyoxalase-like domain 5 126 2.4E-35 T 14-10-2018 IPR025870 Glyoxalase-like domain GYO_3117 d0ac89d95aaa7962277b65b68db9d180 126 Gene3D G3DSA:3.10.180.10 9 126 2.7E-31 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase GYO_3117 d0ac89d95aaa7962277b65b68db9d180 126 SUPERFAMILY SSF54593 5 124 1.34E-28 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase GYO_1244 1e3883cae23c0f82cb17d004d95f041f 375 Gene3D G3DSA:3.30.9.10 88 313 1.3E-75 T 14-10-2018 GYO_1244 1e3883cae23c0f82cb17d004d95f041f 375 Pfam PF01266 FAD dependent oxidoreductase 3 352 1.6E-51 T 14-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 GYO_1244 1e3883cae23c0f82cb17d004d95f041f 375 SUPERFAMILY SSF54373 224 314 9.94E-12 T 14-10-2018 GYO_1244 1e3883cae23c0f82cb17d004d95f041f 375 Gene3D G3DSA:3.50.50.60 4 353 1.3E-75 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily GYO_1244 1e3883cae23c0f82cb17d004d95f041f 375 SUPERFAMILY SSF51905 1 368 2.98E-43 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily GYO_4452 4c6f585e547849b60a675c6ae0b5cf70 455 Gene3D G3DSA:3.10.450.310 208 414 2.4E-84 T 14-10-2018 GYO_4452 4c6f585e547849b60a675c6ae0b5cf70 455 Gene3D G3DSA:3.30.310.160 230 373 2.4E-84 T 14-10-2018 GYO_4452 4c6f585e547849b60a675c6ae0b5cf70 455 Pfam PF07435 YycH protein 4 455 3.5E-174 T 14-10-2018 IPR009996 Regulatory protein YycH GYO_1373 9d70d1a0d260f603528d135ed6ab7247 58 PIRSF PIRSF037666 1 58 1.0E-35 T 14-10-2018 IPR017257 Spore germination protein GerPD, predicted GYO_2193 048e1817e348ce103df57ba9c4760a6d 442 SUPERFAMILY SSF52440 1 113 3.45E-47 T 14-10-2018 IPR016185 Pre-ATP-grasp domain superfamily GYO_2193 048e1817e348ce103df57ba9c4760a6d 442 Gene3D G3DSA:3.30.470.20 87 438 2.9E-154 T 14-10-2018 GYO_2193 048e1817e348ce103df57ba9c4760a6d 442 SUPERFAMILY SSF51246 331 441 3.51E-37 T 14-10-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 GYO_2193 048e1817e348ce103df57ba9c4760a6d 442 Gene3D G3DSA:3.40.50.20 1 85 5.1E-36 T 14-10-2018 GYO_2193 048e1817e348ce103df57ba9c4760a6d 442 Pfam PF00289 Biotin carboxylase, N-terminal domain 1 110 4.8E-45 T 14-10-2018 IPR005481 Biotin carboxylase-like, N-terminal domain Reactome: R-HSA-196780|Reactome: R-HSA-3371599 GYO_2193 048e1817e348ce103df57ba9c4760a6d 442 Pfam PF02785 Biotin carboxylase C-terminal domain 336 439 2.4E-34 T 14-10-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 GYO_2193 048e1817e348ce103df57ba9c4760a6d 442 Gene3D G3DSA:3.30.1490.20 131 202 2.9E-154 T 14-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 GYO_2193 048e1817e348ce103df57ba9c4760a6d 442 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 116 322 6.1E-77 T 14-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 GYO_2193 048e1817e348ce103df57ba9c4760a6d 442 SUPERFAMILY SSF56059 83 347 5.66E-67 T 14-10-2018 GYO_2193 048e1817e348ce103df57ba9c4760a6d 442 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 286 293 - T 14-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 GYO_2193 048e1817e348ce103df57ba9c4760a6d 442 SMART SM00878 336 439 4.6E-52 T 14-10-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 GYO_2193 048e1817e348ce103df57ba9c4760a6d 442 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 153 167 - T 14-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 GYO_2840 30cda34a070e38cd43fb1f87d9caa3a1 243 SUPERFAMILY SSF52266 24 235 4.16E-36 T 14-10-2018 GYO_2840 30cda34a070e38cd43fb1f87d9caa3a1 243 Pfam PF13472 GDSL-like Lipase/Acylhydrolase family 27 230 1.0E-21 T 14-10-2018 IPR013830 SGNH hydrolase-type esterase domain GYO_2840 30cda34a070e38cd43fb1f87d9caa3a1 243 Gene3D G3DSA:3.40.50.1110 17 238 5.3E-39 T 14-10-2018 IPR036514 SGNH hydrolase superfamily GYO_3058 b91c683a9815da9ca34d3201e3a19529 262 SUPERFAMILY SSF69618 9 256 1.31E-58 T 14-10-2018 IPR036108 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase superfamily GO:0004852|GO:0033014 KEGG: 00860+4.2.1.75|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 GYO_3058 b91c683a9815da9ca34d3201e3a19529 262 Gene3D G3DSA:3.40.50.10090 5 134 2.0E-24 T 14-10-2018 GYO_3058 b91c683a9815da9ca34d3201e3a19529 262 Pfam PF02602 Uroporphyrinogen-III synthase HemD 23 250 3.5E-48 T 14-10-2018 IPR003754 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase GO:0004852|GO:0033014 KEGG: 00860+4.2.1.75|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 GYO_3058 b91c683a9815da9ca34d3201e3a19529 262 Gene3D G3DSA:3.40.50.10090 150 258 3.4E-19 T 14-10-2018 GYO_2430 1a940705353c21b33126b77772087442 382 SUPERFAMILY SSF53901 220 360 9.42E-33 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 GYO_2430 1a940705353c21b33126b77772087442 382 SUPERFAMILY SSF53901 1 209 8.64E-46 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 GYO_2430 1a940705353c21b33126b77772087442 382 PIRSF PIRSF000451 1 363 3.5E-125 T 14-10-2018 IPR011141 Polyketide synthase, type III GO:0009058|GO:0016747 GYO_2430 1a940705353c21b33126b77772087442 382 Gene3D G3DSA:3.40.47.10 1 213 3.7E-63 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 GYO_2430 1a940705353c21b33126b77772087442 382 ProSitePatterns PS00441 Chalcone and stilbene synthases active site. 136 152 - T 14-10-2018 IPR018088 Chalcone/stilbene synthase, active site GO:0009058|GO:0016746 KEGG: 00941+2.3.1.74|MetaCyc: PWY-5135|MetaCyc: PWY-6316|MetaCyc: PWY-6515|MetaCyc: PWY-6787|MetaCyc: PWY-7397|MetaCyc: PWY-7897 GYO_2430 1a940705353c21b33126b77772087442 382 Pfam PF00195 Chalcone and stilbene synthases, N-terminal domain 2 203 1.9E-20 T 14-10-2018 IPR001099 Chalcone/stilbene synthase, N-terminal GYO_2430 1a940705353c21b33126b77772087442 382 Pfam PF02797 Chalcone and stilbene synthases, C-terminal domain 226 359 4.8E-17 T 14-10-2018 IPR012328 Chalcone/stilbene synthase, C-terminal GYO_2430 1a940705353c21b33126b77772087442 382 Gene3D G3DSA:3.40.47.10 219 361 2.0E-35 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 GYO_3689 99d3d5d7a529c51de2100392ae578211 203 TIGRFAM TIGR03733 lanti_perm_MutG: lantibiotic protection ABC transporter permease subunit, MutG family 1 200 3.5E-69 T 14-10-2018 IPR022294 Lantibiotic protection ABC transporter permease subunit, MutG family GYO_2266 2c476a943dc17482efbf5939d4528ced 296 Pfam PF02517 CAAX protease self-immunity 135 233 5.5E-10 T 14-10-2018 IPR003675 CAAX amino terminal protease GO:0016020 Reactome: R-HSA-5689880 GYO_3779 d9ff58ddff41f62117cf82bcb4c5a7ea 129 Pfam PF00386 C1q domain 8 114 1.8E-7 T 14-10-2018 IPR001073 C1q domain GYO_3779 d9ff58ddff41f62117cf82bcb4c5a7ea 129 SUPERFAMILY SSF49842 12 105 2.15E-12 T 14-10-2018 IPR008983 Tumour necrosis factor-like domain superfamily GO:0005515 GYO_3779 d9ff58ddff41f62117cf82bcb4c5a7ea 129 Gene3D G3DSA:2.60.120.40 1 125 1.1E-10 T 14-10-2018 IPR008983 Tumour necrosis factor-like domain superfamily GO:0005515 GYO_1956 1307229b86e1a02d2b610e8d6386e951 282 SUPERFAMILY SSF52540 9 252 1.82E-50 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase GYO_1956 1307229b86e1a02d2b610e8d6386e951 282 Gene3D G3DSA:1.10.1580.10 180 272 4.5E-30 T 14-10-2018 IPR023179 GTP-binding protein, orthogonal bundle domain superfamily GYO_1956 1307229b86e1a02d2b610e8d6386e951 282 Pfam PF01926 50S ribosome-binding GTPase 123 213 7.9E-17 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 GYO_1956 1307229b86e1a02d2b610e8d6386e951 282 Gene3D G3DSA:3.40.50.300 12 179 4.3E-52 T 14-10-2018 GYO_1956 1307229b86e1a02d2b610e8d6386e951 282 PIRSF PIRSF006230 1 282 1.1E-105 T 14-10-2018 IPR016478 GTPase, MTG1 GYO_1956 1307229b86e1a02d2b610e8d6386e951 282 TIGRFAM TIGR03596 GTPase_YlqF: ribosome biogenesis GTP-binding protein YlqF 3 278 1.6E-115 T 14-10-2018 IPR019991 GTP-binding protein, ribosome biogenesis GYO_3582 c4aefcaed0353c41b551b85a2f2aa4ea 127 Hamap MF_00272 Glycine cleavage system H protein [gcvH]. 4 125 40.2 T 14-10-2018 IPR002930 Glycine cleavage system H-protein GO:0005960|GO:0019464 Reactome: R-HSA-389661|Reactome: R-HSA-6783984 GYO_3582 c4aefcaed0353c41b551b85a2f2aa4ea 127 SUPERFAMILY SSF51230 3 125 4.84E-46 T 14-10-2018 IPR011053 Single hybrid motif GYO_3582 c4aefcaed0353c41b551b85a2f2aa4ea 127 TIGRFAM TIGR00527 gcvH: glycine cleavage system H protein 3 127 3.4E-63 T 14-10-2018 IPR017453 Glycine cleavage system H-protein, subgroup GO:0005960|GO:0019464 Reactome: R-HSA-389661|Reactome: R-HSA-6783984 GYO_3582 c4aefcaed0353c41b551b85a2f2aa4ea 127 Pfam PF01597 Glycine cleavage H-protein 7 126 1.8E-51 T 14-10-2018 IPR033753 Glycine cleavage system H-protein/Simiate GYO_3582 c4aefcaed0353c41b551b85a2f2aa4ea 127 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 47 76 - T 14-10-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 GYO_3582 c4aefcaed0353c41b551b85a2f2aa4ea 127 Gene3D G3DSA:2.40.50.100 2 127 1.5E-53 T 14-10-2018 GYO_1366 1c816365549b3acda058c1c641b0ada0 1166 Pfam PF12705 PD-(D/E)XK nuclease superfamily 791 1131 1.1E-57 T 14-10-2018 IPR038726 PD-(D/E)XK endonuclease-like domain, AddAB-type GYO_1366 1c816365549b3acda058c1c641b0ada0 1166 SUPERFAMILY SSF52540 301 749 5.71E-61 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase GYO_1366 1c816365549b3acda058c1c641b0ada0 1166 TIGRFAM TIGR02773 addB_Gpos: helicase-exonuclease AddAB, AddB subunit 2 1163 0.0 T 14-10-2018 IPR014140 DNA helicase subunit AddB GO:0000724|GO:0016788 GYO_1366 1c816365549b3acda058c1c641b0ada0 1166 Gene3D G3DSA:3.40.50.300 119 278 3.0E-38 T 14-10-2018 GYO_1366 1c816365549b3acda058c1c641b0ada0 1166 Hamap MF_01452 ATP-dependent helicase/deoxyribonuclease subunit B [addB]. 2 1162 65.756 T 14-10-2018 IPR014140 DNA helicase subunit AddB GO:0000724|GO:0016788 GYO_1366 1c816365549b3acda058c1c641b0ada0 1166 Gene3D G3DSA:3.40.50.300 499 700 6.0E-48 T 14-10-2018 GYO_1366 1c816365549b3acda058c1c641b0ada0 1166 Gene3D G3DSA:3.40.50.300 279 431 3.3E-39 T 14-10-2018 GYO_2771 dc42098b20ef81d035ea0596ae8c1ceb 375 PIRSF PIRSF004640 1 361 4.7E-157 T 14-10-2018 IPR016425 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial GO:0005506|GO:0008299|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 GYO_2771 dc42098b20ef81d035ea0596ae8c1ceb 375 Gene3D G3DSA:3.30.413.10 260 359 7.2E-36 T 14-10-2018 GYO_2771 dc42098b20ef81d035ea0596ae8c1ceb 375 SUPERFAMILY SSF56014 263 359 1.13E-14 T 14-10-2018 GYO_2771 dc42098b20ef81d035ea0596ae8c1ceb 375 Hamap MF_00159 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (ferredoxin) [ispG]. 5 355 34.981 T 14-10-2018 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 GYO_2771 dc42098b20ef81d035ea0596ae8c1ceb 375 Gene3D G3DSA:3.20.20.20 1 259 4.1E-111 T 14-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 GYO_2771 dc42098b20ef81d035ea0596ae8c1ceb 375 TIGRFAM TIGR00612 ispG_gcpE: 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase 7 350 8.8E-133 T 14-10-2018 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 GYO_2771 dc42098b20ef81d035ea0596ae8c1ceb 375 SUPERFAMILY SSF51717 15 235 1.96E-17 T 14-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 GYO_2771 dc42098b20ef81d035ea0596ae8c1ceb 375 Pfam PF04551 GcpE protein 10 351 4.7E-141 T 14-10-2018 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 GYO_3919 c805a099bf7175c8717cc73ff6a2d977 380 Pfam PF02350 UDP-N-acetylglucosamine 2-epimerase 25 363 1.5E-121 T 14-10-2018 IPR003331 UDP-N-acetylglucosamine 2-epimerase domain Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 GYO_3919 c805a099bf7175c8717cc73ff6a2d977 380 TIGRFAM TIGR00236 wecB: UDP-N-acetylglucosamine 2-epimerase 4 366 1.0E-183 T 14-10-2018 IPR029767 UDP-N-acetylglucosamine 2-epimerase WecB-like GO:0008761 GYO_3919 c805a099bf7175c8717cc73ff6a2d977 380 Gene3D G3DSA:3.40.50.2000 6 361 5.2E-160 T 14-10-2018 GYO_3919 c805a099bf7175c8717cc73ff6a2d977 380 Gene3D G3DSA:3.40.50.2000 191 351 5.2E-160 T 14-10-2018 GYO_3919 c805a099bf7175c8717cc73ff6a2d977 380 SUPERFAMILY SSF53756 3 368 2.06E-140 T 14-10-2018 GYO_4113 b6befeb78b68be4c05e5dbdd03e870f9 395 SUPERFAMILY SSF103473 6 388 4.19E-60 T 14-10-2018 IPR036259 MFS transporter superfamily GYO_4113 b6befeb78b68be4c05e5dbdd03e870f9 395 Gene3D G3DSA:1.20.1250.20 186 393 3.3E-47 T 14-10-2018 GYO_4113 b6befeb78b68be4c05e5dbdd03e870f9 395 Pfam PF07690 Major Facilitator Superfamily 16 341 6.5E-42 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 GYO_4113 b6befeb78b68be4c05e5dbdd03e870f9 395 Gene3D G3DSA:1.20.1250.20 3 180 2.2E-37 T 14-10-2018 GYO_1586 e4b2601b208eccb4c73d41e679cdd266 88 Pfam PF10844 Protein of unknown function (DUF2577) 7 58 3.8E-6 T 14-10-2018 IPR022555 Protein of unknown function, DUF2577 GYO_1586 e4b2601b208eccb4c73d41e679cdd266 88 ProDom PD028957 PBSX RELATED XKDR ELEMENT LIN1285 PHAGE PHAGE-LIKE YQBR 3 88 1.0E-40 T 14-10-2018 IPR022555 Protein of unknown function, DUF2577 GYO_1573 5b9ae2cdfcdaf3c7f0aa9b24c2deb5c2 311 SUPERFAMILY SSF56563 19 288 8.24E-9 T 14-10-2018 GYO_1573 5b9ae2cdfcdaf3c7f0aa9b24c2deb5c2 311 Pfam PF05065 Phage capsid family 20 305 7.2E-24 T 14-10-2018 IPR024455 Phage capsid GYO_3765 f3f6fbd22881355824865131ef4bf21b 367 Pfam PF14897 EpsG family 37 362 1.0E-52 T 14-10-2018 GYO_1412 a625f40d18be592bdd3644138abc5c58 41 Pfam PF10035 Uncharacterized protein conserved in bacteria (DUF2179) 2 36 4.8E-11 T 14-10-2018 IPR019264 Domain of unknown function DUF2179 GYO_1412 a625f40d18be592bdd3644138abc5c58 41 Gene3D G3DSA:3.30.70.120 1 29 1.9E-5 T 14-10-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal GYO_4025 6af8ec4c71ab3e73d7a2bb4a9cc9dffd 257 SMART SM00422 3 72 9.5E-31 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 GYO_4025 6af8ec4c71ab3e73d7a2bb4a9cc9dffd 257 SUPERFAMILY SSF89082 163 251 9.29E-28 T 14-10-2018 IPR036244 TipA-like multidrug resistance regulator, antibiotic-recognition domain GYO_4025 6af8ec4c71ab3e73d7a2bb4a9cc9dffd 257 Pfam PF07739 TipAS antibiotic-recognition domain 135 248 8.1E-30 T 14-10-2018 IPR012925 TipAS antibiotic-recognition domain GYO_4025 6af8ec4c71ab3e73d7a2bb4a9cc9dffd 257 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 4 15 2.3E-5 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 GYO_4025 6af8ec4c71ab3e73d7a2bb4a9cc9dffd 257 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 15 28 2.3E-5 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 GYO_4025 6af8ec4c71ab3e73d7a2bb4a9cc9dffd 257 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 39 59 2.3E-5 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 GYO_4025 6af8ec4c71ab3e73d7a2bb4a9cc9dffd 257 Gene3D G3DSA:1.10.1660.10 1 144 1.6E-44 T 14-10-2018 GYO_4025 6af8ec4c71ab3e73d7a2bb4a9cc9dffd 257 SUPERFAMILY SSF46955 3 116 5.49E-30 T 14-10-2018 IPR009061 Putative DNA-binding domain superfamily GYO_4025 6af8ec4c71ab3e73d7a2bb4a9cc9dffd 257 Gene3D G3DSA:1.10.490.50 163 253 2.1E-25 T 14-10-2018 IPR036244 TipA-like multidrug resistance regulator, antibiotic-recognition domain GYO_4025 6af8ec4c71ab3e73d7a2bb4a9cc9dffd 257 Pfam PF13411 MerR HTH family regulatory protein 3 70 1.7E-17 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 GYO_4336 b4be86dd4501b49dbbc34da58b8f3d27 538 Pfam PF04740 LXG domain of WXG superfamily 2 202 1.1E-63 T 14-10-2018 IPR006829 LXG domain GYO_3940 928e9e5c6fe59bcffe1adfa5d2872708 368 TIGRFAM TIGR00912 2A0309: spore germination protein (amino acid permease) 7 363 3.7E-67 T 14-10-2018 IPR004761 Spore germination GerAB GO:0009847|GO:0016021 GYO_3940 928e9e5c6fe59bcffe1adfa5d2872708 368 PIRSF PIRSF006060 299 366 7.6 T 14-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 GYO_3940 928e9e5c6fe59bcffe1adfa5d2872708 368 PIRSF PIRSF006060 1 292 4.7E-9 T 14-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 GYO_3940 928e9e5c6fe59bcffe1adfa5d2872708 368 Pfam PF03845 Spore germination protein 7 330 7.3E-100 T 14-10-2018 IPR004761 Spore germination GerAB GO:0009847|GO:0016021 GYO_3940 928e9e5c6fe59bcffe1adfa5d2872708 368 Gene3D G3DSA:1.20.1740.10 1 364 7.9E-9 T 14-10-2018 GYO_0947 330d32fad71e5ed08e6f9985c50968c0 194 Gene3D G3DSA:1.10.10.60 1 66 5.1E-20 T 14-10-2018 GYO_0947 330d32fad71e5ed08e6f9985c50968c0 194 SUPERFAMILY SSF48498 78 193 3.22E-19 T 14-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily GYO_0947 330d32fad71e5ed08e6f9985c50968c0 194 Pfam PF00440 Bacterial regulatory proteins, tetR family 13 57 1.0E-10 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 GYO_0947 330d32fad71e5ed08e6f9985c50968c0 194 Gene3D G3DSA:1.10.357.10 67 194 3.3E-22 T 14-10-2018 GYO_0947 330d32fad71e5ed08e6f9985c50968c0 194 SUPERFAMILY SSF46689 3 82 8.98E-13 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 GYO_0073 ac1a0143f0bd1d61a03d6d3619f7cd13 125 Pfam PF04977 Septum formation initiator 47 122 5.7E-19 T 14-10-2018 IPR007060 Septum formation initiator FtsL/DivIC GYO_4508 1d0bcc553d47465d467c9fea397853b0 68 PIRSF PIRSF037263 1 66 3.5E-35 T 14-10-2018 IPR009296 Protein of unknown function DUF951 GYO_4508 1d0bcc553d47465d467c9fea397853b0 68 Pfam PF06107 Bacterial protein of unknown function (DUF951) 7 59 5.1E-31 T 14-10-2018 IPR009296 Protein of unknown function DUF951 GYO_0540 1420870b85801a3fa9cc182cc5f1c752 401 Gene3D G3DSA:1.20.1250.20 6 188 8.7E-42 T 14-10-2018 GYO_0540 1420870b85801a3fa9cc182cc5f1c752 401 Gene3D G3DSA:1.20.1250.20 195 401 6.2E-55 T 14-10-2018 GYO_0540 1420870b85801a3fa9cc182cc5f1c752 401 Pfam PF07690 Major Facilitator Superfamily 19 350 4.6E-45 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 GYO_0540 1420870b85801a3fa9cc182cc5f1c752 401 SUPERFAMILY SSF103473 8 394 1.44E-66 T 14-10-2018 IPR036259 MFS transporter superfamily GYO_0540 1420870b85801a3fa9cc182cc5f1c752 401 TIGRFAM TIGR00886 2A0108: nitrite transporter 14 346 2.9E-102 T 14-10-2018 IPR004737 Nitrate transporter GO:0015112|GO:0015113|GO:0015706|GO:0015707|GO:0016021 GYO_0640 88a68a61302c2d54016e2c26531b8451 140 Gene3D G3DSA:2.30.110.10 2 130 1.3E-40 T 14-10-2018 IPR012349 FMN-binding split barrel GO:0048037 GYO_0640 88a68a61302c2d54016e2c26531b8451 140 SUPERFAMILY SSF50475 4 132 2.99E-31 T 14-10-2018 GYO_0640 88a68a61302c2d54016e2c26531b8451 140 Pfam PF16242 Pyridoxamine 5'-phosphate oxidase like 7 127 1.6E-18 T 14-10-2018 IPR038725 General stress protein, FMN-binding split barrel domain GYO_3827 fff4364d783d4aa18d2b3233c6619cba 194 Pfam PF00475 Imidazoleglycerol-phosphate dehydratase 31 174 2.4E-63 T 14-10-2018 IPR000807 Imidazoleglycerol-phosphate dehydratase GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 GYO_3827 fff4364d783d4aa18d2b3233c6619cba 194 ProSitePatterns PS00955 Imidazoleglycerol-phosphate dehydratase signature 2. 156 168 - T 14-10-2018 IPR020565 Imidazoleglycerol-phosphate dehydratase, conserved site GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 GYO_3827 fff4364d783d4aa18d2b3233c6619cba 194 Hamap MF_00076 Imidazoleglycerol-phosphate dehydratase [hisB]. 2 194 41.887 T 14-10-2018 IPR000807 Imidazoleglycerol-phosphate dehydratase GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 GYO_3827 fff4364d783d4aa18d2b3233c6619cba 194 SUPERFAMILY SSF54211 1 86 2.66E-31 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold GYO_3827 fff4364d783d4aa18d2b3233c6619cba 194 SUPERFAMILY SSF54211 87 179 1.05E-35 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold GYO_3827 fff4364d783d4aa18d2b3233c6619cba 194 Gene3D G3DSA:3.30.230.40 90 194 1.5E-40 T 14-10-2018 IPR038494 Imidazole glycerol phosphate dehydratase domain superfamily KEGG: 00340+4.2.1.19 GYO_3827 fff4364d783d4aa18d2b3233c6619cba 194 ProSitePatterns PS00954 Imidazoleglycerol-phosphate dehydratase signature 1. 61 74 - T 14-10-2018 IPR020565 Imidazoleglycerol-phosphate dehydratase, conserved site GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 GYO_3827 fff4364d783d4aa18d2b3233c6619cba 194 Gene3D G3DSA:3.30.230.40 1 89 7.8E-36 T 14-10-2018 IPR038494 Imidazole glycerol phosphate dehydratase domain superfamily KEGG: 00340+4.2.1.19 GYO_0971 da6a725aaddce958cace8be76396125b 318 Gene3D G3DSA:1.10.3720.10 70 318 3.0E-59 T 14-10-2018 IPR035906 MetI-like superfamily GYO_0971 da6a725aaddce958cace8be76396125b 318 SUPERFAMILY SSF161098 74 302 4.71E-49 T 14-10-2018 IPR035906 MetI-like superfamily GYO_0971 da6a725aaddce958cace8be76396125b 318 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 106 312 3.2E-21 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 GYO_1930 db95a2394fb75c3cdf3e35187fb8a423 217 ProSitePatterns PS01085 Ribulose-phosphate 3-epimerase family signature 1. 31 45 - T 14-10-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 GYO_1930 db95a2394fb75c3cdf3e35187fb8a423 217 Gene3D G3DSA:3.20.20.70 1 216 1.5E-89 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 GYO_1930 db95a2394fb75c3cdf3e35187fb8a423 217 Pfam PF00834 Ribulose-phosphate 3 epimerase family 3 201 1.5E-93 T 14-10-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 GYO_1930 db95a2394fb75c3cdf3e35187fb8a423 217 PIRSF PIRSF001461 1 217 4.4E-99 T 14-10-2018 IPR026019 Ribulose-phosphate 3-epimerase GO:0004750|GO:0006098 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 GYO_1930 db95a2394fb75c3cdf3e35187fb8a423 217 ProSitePatterns PS01086 Ribulose-phosphate 3-epimerase family signature 2. 133 155 - T 14-10-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 GYO_1930 db95a2394fb75c3cdf3e35187fb8a423 217 TIGRFAM TIGR01163 rpe: ribulose-phosphate 3-epimerase 3 214 9.9E-94 T 14-10-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 GYO_1930 db95a2394fb75c3cdf3e35187fb8a423 217 SUPERFAMILY SSF51366 1 214 2.62E-76 T 14-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 GYO_4110 d1f803cbfc5aa48260de5862faf3e0df 158 Gene3D G3DSA:2.60.120.10 8 149 1.3E-9 T 14-10-2018 IPR014710 RmlC-like jelly roll fold GYO_4110 d1f803cbfc5aa48260de5862faf3e0df 158 SUPERFAMILY SSF51206 47 142 4.98E-11 T 14-10-2018 IPR018490 Cyclic nucleotide-binding-like GYO_2602 3ea8f38c4608d37328109a4672100efe 381 ProSitePatterns PS00428 Cell cycle proteins ftsW / rodA / spoVE signature. 328 352 - T 14-10-2018 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site GO:0016021 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 GYO_2602 3ea8f38c4608d37328109a4672100efe 381 TIGRFAM TIGR02614 ftsW: cell division protein FtsW 15 369 2.1E-112 T 14-10-2018 IPR013437 Probable peptidoglycan glycosyltransferase FtsW GO:0009252|GO:0016021|GO:0051301 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 GYO_2602 3ea8f38c4608d37328109a4672100efe 381 Pfam PF01098 Cell cycle protein 18 371 3.3E-110 T 14-10-2018 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA GO:0016021|GO:0051301 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 GYO_2920 72112804afb4b1a50060735252bc7c6f 326 SUPERFAMILY SSF51430 2 314 2.62E-92 T 14-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily GYO_2920 72112804afb4b1a50060735252bc7c6f 326 Gene3D G3DSA:3.20.20.100 1 319 7.2E-102 T 14-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily GYO_2920 72112804afb4b1a50060735252bc7c6f 326 Pfam PF00248 Aldo/keto reductase family 15 311 7.6E-69 T 14-10-2018 IPR023210 NADP-dependent oxidoreductase domain GYO_1140 c86af08f5dcb13db9a7a27cd2596764a 157 Gene3D G3DSA:3.40.30.10 2 156 1.3E-54 T 14-10-2018 GYO_1140 c86af08f5dcb13db9a7a27cd2596764a 157 Pfam PF00578 AhpC/TSA family 5 132 1.2E-41 T 14-10-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 GYO_1140 c86af08f5dcb13db9a7a27cd2596764a 157 SUPERFAMILY SSF52833 3 154 3.85E-55 T 14-10-2018 IPR036249 Thioredoxin-like superfamily GYO_1140 c86af08f5dcb13db9a7a27cd2596764a 157 PIRSF PIRSF000239 1 156 2.2E-30 T 14-10-2018 IPR024706 Peroxiredoxin, AhpC-type KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 GYO_3297 ead08260c679034687a5e076f3a2891d 130 Gene3D G3DSA:1.10.10.10 8 125 4.8E-26 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily GYO_3297 ead08260c679034687a5e076f3a2891d 130 SUPERFAMILY SSF46785 5 79 7.92E-21 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily GYO_3297 ead08260c679034687a5e076f3a2891d 130 Pfam PF00392 Bacterial regulatory proteins, gntR family 13 75 1.2E-16 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 GYO_3297 ead08260c679034687a5e076f3a2891d 130 SMART SM00345 16 75 8.8E-15 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 GYO_4354 322ac618fac8f9b8f91f438d514ad889 445 SUPERFAMILY SSF103378 4 435 1.28E-90 T 14-10-2018 IPR036148 MmgE/PrpD superfamily GO:0016829 GYO_4354 322ac618fac8f9b8f91f438d514ad889 445 Gene3D G3DSA:3.30.1330.120 268 401 6.9E-107 T 14-10-2018 GYO_4354 322ac618fac8f9b8f91f438d514ad889 445 Gene3D G3DSA:1.10.4100.10 25 416 6.9E-107 T 14-10-2018 GYO_4354 322ac618fac8f9b8f91f438d514ad889 445 Pfam PF03972 MmgE/PrpD family 12 430 8.4E-90 T 14-10-2018 IPR005656 MmgE/PrpD GO:0016829 GYO_2880 df272eb2d06dc218b9baa3edffe4056a 137 SUPERFAMILY SSF54427 4 136 5.14E-36 T 14-10-2018 IPR032710 NTF2-like domain superfamily GYO_2880 df272eb2d06dc218b9baa3edffe4056a 137 Gene3D G3DSA:3.10.450.50 1 137 3.2E-37 T 14-10-2018 GYO_2880 df272eb2d06dc218b9baa3edffe4056a 137 Pfam PF07366 SnoaL-like polyketide cyclase 9 133 8.2E-31 T 14-10-2018 IPR009959 Polyketide cyclase SnoaL-like GO:0030638 MetaCyc: PWY-7352|MetaCyc: PWY-7354 GYO_1949 61f95af133840fcb8edebfddbe291f71 90 SUPERFAMILY SSF54565 2 86 1.83E-34 T 14-10-2018 IPR023803 Ribosomal protein S16 domain superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 GYO_1949 61f95af133840fcb8edebfddbe291f71 90 Pfam PF00886 Ribosomal protein S16 9 67 4.8E-26 T 14-10-2018 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 GYO_1949 61f95af133840fcb8edebfddbe291f71 90 ProSitePatterns PS00732 Ribosomal protein S16 signature. 3 12 - T 14-10-2018 IPR020592 Ribosomal protein S16, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 GYO_1949 61f95af133840fcb8edebfddbe291f71 90 TIGRFAM TIGR00002 S16: ribosomal protein bS16 3 80 1.7E-35 T 14-10-2018 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 GYO_1949 61f95af133840fcb8edebfddbe291f71 90 Gene3D G3DSA:3.30.1320.10 1 90 2.2E-37 T 14-10-2018 IPR023803 Ribosomal protein S16 domain superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 GYO_1949 61f95af133840fcb8edebfddbe291f71 90 Hamap MF_00385 30S ribosomal protein S16 [rpsP]. 2 77 24.937 T 14-10-2018 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 GYO_2150 3283786bb9ed3185c47495e620b1120d 140 Gene3D G3DSA:3.10.180.10 1 136 7.6E-40 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase GYO_2150 3283786bb9ed3185c47495e620b1120d 140 Hamap MF_01512 Metallothiol transferase FosB [fosB]. 2 139 42.238 T 14-10-2018 IPR022858 Metallothiol transferase FosB GO:0016765|GO:0046677 GYO_2150 3283786bb9ed3185c47495e620b1120d 140 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 5 117 1.1E-14 T 14-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain GYO_2150 3283786bb9ed3185c47495e620b1120d 140 SUPERFAMILY SSF54593 4 130 1.26E-25 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase GYO_0826 7ef527ea8198f89b46aed2764cfccf0b 266 Gene3D G3DSA:3.30.420.10 101 257 5.6E-14 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 GYO_0826 7ef527ea8198f89b46aed2764cfccf0b 266 Pfam PF00665 Integrase core domain 107 218 1.4E-21 T 14-10-2018 IPR001584 Integrase, catalytic core GO:0015074 GYO_0826 7ef527ea8198f89b46aed2764cfccf0b 266 SUPERFAMILY SSF53098 101 260 4.05E-30 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily GYO_0826 7ef527ea8198f89b46aed2764cfccf0b 266 Pfam PF13276 HTH-like domain 32 84 1.3E-13 T 14-10-2018 IPR025948 HTH-like domain GYO_3255 b3f39e05173d29cbb14944b1059053b8 146 Pfam PF02028 BCCT, betaine/carnitine/choline family transporter 2 124 2.1E-34 T 14-10-2018 IPR000060 BCCT transporter family GO:0016020|GO:0022857|GO:0071705 GYO_2391 f38e04b738083fce094bd3d027fbe8ed 144 SUPERFAMILY SSF51316 3 143 1.1E-61 T 14-10-2018 IPR011057 Mss4-like superfamily GYO_2391 f38e04b738083fce094bd3d027fbe8ed 144 Gene3D G3DSA:2.170.150.20 1 144 4.3E-64 T 14-10-2018 GYO_2391 f38e04b738083fce094bd3d027fbe8ed 144 Pfam PF01641 SelR domain 10 126 2.9E-50 T 14-10-2018 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 GYO_2391 f38e04b738083fce094bd3d027fbe8ed 144 Hamap MF_01400 Peptide methionine sulfoxide reductase MsrB [msrB]. 4 127 37.412 T 14-10-2018 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 GYO_2391 f38e04b738083fce094bd3d027fbe8ed 144 TIGRFAM TIGR00357 TIGR00357: methionine-R-sulfoxide reductase 3 135 1.4E-67 T 14-10-2018 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 GYO_2070 1431a02924a9e3a2a13d381c66230253 420 Gene3D G3DSA:3.40.47.10 189 340 6.5E-180 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 GYO_2070 1431a02924a9e3a2a13d381c66230253 420 SUPERFAMILY SSF53901 186 419 8.23E-59 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 GYO_2070 1431a02924a9e3a2a13d381c66230253 420 Gene3D G3DSA:3.40.47.10 5 418 6.5E-180 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 GYO_2070 1431a02924a9e3a2a13d381c66230253 420 Pfam PF01154 Hydroxymethylglutaryl-coenzyme A synthase N terminal 4 180 1.3E-10 T 14-10-2018 IPR013528 Hydroxymethylglutaryl-coenzyme A synthase, N-terminal GO:0004421|GO:0008299 Reactome: R-HSA-1989781 GYO_2070 1431a02924a9e3a2a13d381c66230253 420 Pfam PF08540 Hydroxymethylglutaryl-coenzyme A synthase C terminal 270 371 4.5E-10 T 14-10-2018 IPR013746 Hydroxymethylglutaryl-coenzyme A synthase C-terminal domain GO:0004421|GO:0008299 KEGG: 00072+2.3.3.10|KEGG: 00280+2.3.3.10|KEGG: 00650+2.3.3.10|KEGG: 00900+2.3.3.10|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-7571|MetaCyc: PWY-922|Reactome: R-HSA-1989781 GYO_2070 1431a02924a9e3a2a13d381c66230253 420 SUPERFAMILY SSF53901 4 181 1.84E-33 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 GYO_1118 71c72a1b8f37ab29cc90ca47e9d05c18 63 Pfam PF14151 YfhD-like protein 1 61 1.7E-26 T 14-10-2018 IPR025435 YfhD-like protein GYO_1118 71c72a1b8f37ab29cc90ca47e9d05c18 63 ProDom PD053407 YFHD 1 39 8.0E-17 T 14-10-2018 GYO_0304 8d1bdbcf71d8268e307dd84e62709ba5 305 Pfam PF04233 Phage Mu protein F like protein 156 277 4.6E-27 T 14-10-2018 IPR006528 Phage head morphogenesis domain GYO_0225 8d1bdbcf71d8268e307dd84e62709ba5 305 Pfam PF04233 Phage Mu protein F like protein 156 277 4.6E-27 T 14-10-2018 IPR006528 Phage head morphogenesis domain GYO_0453 5bb00c51512c2449d6f33417845be385 312 SUPERFAMILY SSF103481 218 302 2.75E-10 T 14-10-2018 GYO_0453 5bb00c51512c2449d6f33417845be385 312 Pfam PF00892 EamA-like transporter family 163 299 1.4E-19 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 GYO_0453 5bb00c51512c2449d6f33417845be385 312 Pfam PF00892 EamA-like transporter family 15 149 2.6E-7 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 GYO_0453 5bb00c51512c2449d6f33417845be385 312 SUPERFAMILY SSF103481 49 152 9.81E-7 T 14-10-2018 GYO_4259 319c3376422db996e8ff4099e3803197 452 TIGRFAM TIGR00359 cello_pts_IIC: PTS system, cellobiose-specific IIC component 12 435 8.7E-211 T 14-10-2018 IPR004796 Phosphotransferase system, cellobiose-type IIC component GO:0008982|GO:0009401|GO:0016021 GYO_4259 319c3376422db996e8ff4099e3803197 452 TIGRFAM TIGR00410 lacE: PTS system, lactose/cellobiose family IIC component 12 435 8.7E-211 T 14-10-2018 IPR004501 Phosphotransferase system, EIIC component, type 3 GO:0008982|GO:0009401|GO:0016021 GYO_4259 319c3376422db996e8ff4099e3803197 452 Pfam PF02378 Phosphotransferase system, EIIC 29 359 2.2E-81 T 14-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 GYO_4259 319c3376422db996e8ff4099e3803197 452 PIRSF PIRSF006351 1 445 8.7E-158 T 14-10-2018 IPR004796 Phosphotransferase system, cellobiose-type IIC component GO:0008982|GO:0009401|GO:0016021 GYO_3330 5cad12165b4a21f5cd5e7fbe63a7fecf 250 SMART SM00382 28 226 2.8E-11 T 14-10-2018 IPR003593 AAA+ ATPase domain GYO_3330 5cad12165b4a21f5cd5e7fbe63a7fecf 250 SUPERFAMILY SSF52540 4 225 3.9E-60 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase GYO_3330 5cad12165b4a21f5cd5e7fbe63a7fecf 250 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 GYO_3330 5cad12165b4a21f5cd5e7fbe63a7fecf 250 Pfam PF00005 ABC transporter 19 165 8.2E-31 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 GYO_3330 5cad12165b4a21f5cd5e7fbe63a7fecf 250 Gene3D G3DSA:3.40.50.300 3 243 8.1E-68 T 14-10-2018 GYO_3798 c7f022ca8000b7b18a0699f6a862094f 191 Pfam PF03641 Possible lysine decarboxylase 46 176 1.0E-43 T 14-10-2018 IPR031100 LOG family GYO_3798 c7f022ca8000b7b18a0699f6a862094f 191 SUPERFAMILY SSF102405 1 179 2.29E-59 T 14-10-2018 GYO_3798 c7f022ca8000b7b18a0699f6a862094f 191 TIGRFAM TIGR00730 TIGR00730: TIGR00730 family protein 2 179 8.3E-86 T 14-10-2018 IPR005269 Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG GYO_3798 c7f022ca8000b7b18a0699f6a862094f 191 Gene3D G3DSA:3.40.50.450 1 191 2.6E-79 T 14-10-2018 GYO_1114 c9299ca65ba385090f921cdbade51d0b 343 Pfam PF01032 FecCD transport family 24 339 4.0E-90 T 14-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 GYO_1114 c9299ca65ba385090f921cdbade51d0b 343 Gene3D G3DSA:1.10.3470.10 11 343 8.6E-95 T 14-10-2018 IPR037294 ABC transporter, BtuC-like GYO_1114 c9299ca65ba385090f921cdbade51d0b 343 SUPERFAMILY SSF81345 11 339 8.24E-82 T 14-10-2018 IPR037294 ABC transporter, BtuC-like GYO_0622 d0a24b1b4bb3918246068c23c203c9d3 249 ProSitePatterns PS01228 Hypothetical cof family signature 1. 12 23 - T 14-10-2018 GYO_0622 d0a24b1b4bb3918246068c23c203c9d3 249 Gene3D G3DSA:3.90.1070.10 91 170 4.4E-64 T 14-10-2018 GYO_0622 d0a24b1b4bb3918246068c23c203c9d3 249 Gene3D G3DSA:3.40.50.1000 13 235 4.4E-64 T 14-10-2018 IPR023214 HAD superfamily GYO_0622 d0a24b1b4bb3918246068c23c203c9d3 249 Pfam PF08282 haloacid dehalogenase-like hydrolase 126 244 1.4E-32 T 14-10-2018 GYO_0622 d0a24b1b4bb3918246068c23c203c9d3 249 Pfam PF08282 haloacid dehalogenase-like hydrolase 13 123 6.8E-25 T 14-10-2018 GYO_0622 d0a24b1b4bb3918246068c23c203c9d3 249 SUPERFAMILY SSF56784 9 248 1.84E-67 T 14-10-2018 IPR036412 HAD-like superfamily GYO_0622 d0a24b1b4bb3918246068c23c203c9d3 249 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 12 217 4.5E-28 T 14-10-2018 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: R-HSA-446205 GYO_0622 d0a24b1b4bb3918246068c23c203c9d3 249 TIGRFAM TIGR01482 SPP-subfamily: sucrose-phosphate phosphatase subfamily 13 244 2.1E-32 T 14-10-2018 GYO_0622 d0a24b1b4bb3918246068c23c203c9d3 249 ProSitePatterns PS01229 Hypothetical cof family signature 2. 198 220 - T 14-10-2018 GYO_0622 d0a24b1b4bb3918246068c23c203c9d3 249 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 221 233 9.8E-5 T 14-10-2018 GYO_0622 d0a24b1b4bb3918246068c23c203c9d3 249 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 198 217 9.8E-5 T 14-10-2018 GYO_0622 d0a24b1b4bb3918246068c23c203c9d3 249 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 14 28 9.8E-5 T 14-10-2018 GYO_2904 eefe683797aafa8e20993dcef9eb27a9 400 ProSitePatterns PS00216 Sugar transport proteins signature 1. 65 81 - T 14-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 GYO_2904 eefe683797aafa8e20993dcef9eb27a9 400 Gene3D G3DSA:1.20.1250.20 3 392 3.2E-73 T 14-10-2018 GYO_2904 eefe683797aafa8e20993dcef9eb27a9 400 Pfam PF07690 Major Facilitator Superfamily 16 357 2.5E-55 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 GYO_2904 eefe683797aafa8e20993dcef9eb27a9 400 TIGRFAM TIGR00880 2_A_01_02: multidrug resistance protein 48 186 3.1E-40 T 14-10-2018 IPR004734 Multidrug resistance protein GO:0015238|GO:0015893|GO:0016021 Reactome: R-HSA-442660 GYO_2904 eefe683797aafa8e20993dcef9eb27a9 400 SUPERFAMILY SSF103473 7 394 6.28E-76 T 14-10-2018 IPR036259 MFS transporter superfamily GYO_2904 eefe683797aafa8e20993dcef9eb27a9 400 PRINTS PR01035 Tetracycline resistance protein signature 136 158 1.3E-17 T 14-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 GYO_2904 eefe683797aafa8e20993dcef9eb27a9 400 PRINTS PR01035 Tetracycline resistance protein signature 164 184 1.3E-17 T 14-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 GYO_2904 eefe683797aafa8e20993dcef9eb27a9 400 PRINTS PR01035 Tetracycline resistance protein signature 21 37 1.3E-17 T 14-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 GYO_2904 eefe683797aafa8e20993dcef9eb27a9 400 PRINTS PR01035 Tetracycline resistance protein signature 341 364 1.3E-17 T 14-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 GYO_0545 dc45c8121f800ece1a786ee443c14c6f 226 Gene3D G3DSA:1.10.3720.10 10 224 5.0E-55 T 14-10-2018 IPR035906 MetI-like superfamily GYO_0545 dc45c8121f800ece1a786ee443c14c6f 226 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 20 117 8.2E-31 T 14-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 GYO_0545 dc45c8121f800ece1a786ee443c14c6f 226 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 41 222 2.8E-24 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 GYO_0545 dc45c8121f800ece1a786ee443c14c6f 226 SUPERFAMILY SSF161098 21 214 1.14E-46 T 14-10-2018 IPR035906 MetI-like superfamily GYO_4368 a3ee6d7305d5b466553a7104350c9725 321 Pfam PF01497 Periplasmic binding protein 70 289 7.4E-29 T 14-10-2018 IPR002491 ABC transporter periplasmic binding domain GYO_4368 a3ee6d7305d5b466553a7104350c9725 321 Gene3D G3DSA:3.40.50.1980 151 317 1.1E-55 T 14-10-2018 GYO_4368 a3ee6d7305d5b466553a7104350c9725 321 SUPERFAMILY SSF53807 38 303 2.39E-52 T 14-10-2018 GYO_4368 a3ee6d7305d5b466553a7104350c9725 321 Gene3D G3DSA:3.40.50.1980 28 150 3.7E-24 T 14-10-2018 GYO_1629 2fae2f2820364fb41189211e90b94f8a 105 SUPERFAMILY SSF103481 7 102 3.79E-18 T 14-10-2018 GYO_1629 2fae2f2820364fb41189211e90b94f8a 105 Gene3D G3DSA:1.10.3730.20 1 105 6.3E-25 T 14-10-2018 GYO_1629 2fae2f2820364fb41189211e90b94f8a 105 Pfam PF00893 Small Multidrug Resistance protein 3 94 2.0E-31 T 14-10-2018 IPR000390 Small multidrug resistance protein family GO:0016021 GYO_1380 0c990e7b3b14ed93acd9b8eb2e0ba690 301 Gene3D G3DSA:3.90.850.10 87 301 5.3E-88 T 14-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 GYO_1380 0c990e7b3b14ed93acd9b8eb2e0ba690 301 Pfam PF01557 Fumarylacetoacetate (FAA) hydrolase family 93 300 3.5E-71 T 14-10-2018 IPR011234 Fumarylacetoacetase-like, C-terminal GO:0003824 GYO_1380 0c990e7b3b14ed93acd9b8eb2e0ba690 301 SUPERFAMILY SSF56529 81 300 3.79E-77 T 14-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 GYO_0838 80f4b3b5d6a167f157aad7592dc29297 388 Gene3D G3DSA:1.20.1250.20 3 188 1.2E-29 T 14-10-2018 GYO_0838 80f4b3b5d6a167f157aad7592dc29297 388 Gene3D G3DSA:1.20.1250.20 198 384 6.7E-20 T 14-10-2018 GYO_0838 80f4b3b5d6a167f157aad7592dc29297 388 SUPERFAMILY SSF103473 5 380 5.62E-61 T 14-10-2018 IPR036259 MFS transporter superfamily GYO_0838 80f4b3b5d6a167f157aad7592dc29297 388 Pfam PF07690 Major Facilitator Superfamily 10 320 2.1E-39 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 GYO_1054 4da2fc07ab59c2301a58cf661b0bfaea 71 Pfam PF06569 Protein of unknown function (DUF1128) 1 71 7.2E-33 T 14-10-2018 IPR009507 Protein of unknown function UPF0435 GYO_1054 4da2fc07ab59c2301a58cf661b0bfaea 71 Hamap MF_00829 UPF0435 protein . 4 71 19.776 T 14-10-2018 IPR009507 Protein of unknown function UPF0435 GYO_3647 a7a5b02daa185cff3a85ea32532425a8 617 Pfam PF00884 Sulfatase 243 535 7.4E-34 T 14-10-2018 IPR000917 Sulfatase, N-terminal GO:0008484 GYO_3647 a7a5b02daa185cff3a85ea32532425a8 617 SUPERFAMILY SSF53649 241 570 5.4E-67 T 14-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 GYO_3647 a7a5b02daa185cff3a85ea32532425a8 617 Gene3D G3DSA:3.40.720.10 236 545 4.3E-71 T 14-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 GYO_3647 a7a5b02daa185cff3a85ea32532425a8 617 PIRSF PIRSF005091 1 617 5.0E-176 T 14-10-2018 IPR012160 Lipoteichoic acid synthase-like GYO_1661 4f13af24f42af274f35444f5805eec9e 270 Gene3D G3DSA:3.60.21.10 44 256 4.8E-21 T 14-10-2018 IPR029052 Metallo-dependent phosphatase-like GYO_1661 4f13af24f42af274f35444f5805eec9e 270 SUPERFAMILY SSF56300 47 268 6.99E-30 T 14-10-2018 GYO_1661 4f13af24f42af274f35444f5805eec9e 270 Pfam PF00149 Calcineurin-like phosphoesterase 46 209 7.2E-9 T 14-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 GYO_1871 de18903a14b84fc25190c087bf33f14e 231 Gene3D G3DSA:3.30.70.1880 91 231 2.4E-32 T 14-10-2018 GYO_1871 de18903a14b84fc25190c087bf33f14e 231 Pfam PF05949 Bacterial protein of unknown function (DUF881) 93 226 3.3E-34 T 14-10-2018 IPR010273 Protein of unknown function DUF881 GYO_0933 04890f592874c4f1eadc2058c44a0551 282 SUPERFAMILY SSF46689 3 69 7.56E-19 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 GYO_0933 04890f592874c4f1eadc2058c44a0551 282 Pfam PF00440 Bacterial regulatory proteins, tetR family 8 53 5.5E-18 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 GYO_0933 04890f592874c4f1eadc2058c44a0551 282 ProSitePatterns PS01081 TetR-type HTH domain signature. 20 51 - T 14-10-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site GYO_0933 04890f592874c4f1eadc2058c44a0551 282 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 29 52 9.6E-11 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 GYO_0933 04890f592874c4f1eadc2058c44a0551 282 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 8 21 9.6E-11 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 GYO_0933 04890f592874c4f1eadc2058c44a0551 282 Gene3D G3DSA:1.10.357.10 1 190 2.0E-31 T 14-10-2018 GYO_2627 50b1e0334e0364b439ff8bb9509a5ace 49 Gene3D G3DSA:2.20.28.120 1 49 4.9E-23 T 14-10-2018 IPR038584 Ribosomal protein L33 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 GYO_2627 50b1e0334e0364b439ff8bb9509a5ace 49 ProSitePatterns PS00582 Ribosomal protein L33 signature. 17 36 - T 14-10-2018 IPR018264 Ribosomal protein L33, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 GYO_2627 50b1e0334e0364b439ff8bb9509a5ace 49 Pfam PF00471 Ribosomal protein L33 3 49 2.8E-22 T 14-10-2018 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 GYO_2627 50b1e0334e0364b439ff8bb9509a5ace 49 SUPERFAMILY SSF57829 1 49 2.2E-18 T 14-10-2018 IPR011332 Zinc-binding ribosomal protein GO:0006412 GYO_2627 50b1e0334e0364b439ff8bb9509a5ace 49 TIGRFAM TIGR01023 rpmG_bact: ribosomal protein bL33 3 49 1.4E-19 T 14-10-2018 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 GYO_2627 50b1e0334e0364b439ff8bb9509a5ace 49 Hamap MF_00294 50S ribosomal protein L33 [rpmG]. 1 49 18.331 T 14-10-2018 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 GYO_4150 d3adebaa6493e5353eb32b71d02b97b0 281 Hamap MF_02119 Lipoyl-[GcvH]:protein N-lipoyltransferase [lipL]. 7 281 50.683 T 14-10-2018 IPR024897 Octanoyltransferase LipL GO:0009107|GO:0009249|GO:0016415 MetaCyc: PWY-6987 GYO_4150 d3adebaa6493e5353eb32b71d02b97b0 281 Gene3D G3DSA:3.30.930.10 5 281 1.0E-80 T 14-10-2018 GYO_4150 d3adebaa6493e5353eb32b71d02b97b0 281 Pfam PF03099 Biotin/lipoate A/B protein ligase family 73 184 1.2E-20 T 14-10-2018 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain GO:0006464 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382 GYO_4150 d3adebaa6493e5353eb32b71d02b97b0 281 SUPERFAMILY SSF55681 6 263 3.98E-69 T 14-10-2018 GYO_0123 89a2926cd5477fcafd8681433ab26ce1 143 SUPERFAMILY SSF69065 9 130 6.8E-42 T 14-10-2018 IPR036389 Ribonuclease III, endonuclease domain superfamily GO:0004525|GO:0006396 GYO_0123 89a2926cd5477fcafd8681433ab26ce1 143 PIRSF PIRSF005520 1 139 7.9E-54 T 14-10-2018 IPR008226 Mini-ribonuclease 3 family GYO_0123 89a2926cd5477fcafd8681433ab26ce1 143 Hamap MF_01468 Mini-ribonuclease 3 [mrnC]. 7 133 30.214 T 14-10-2018 IPR008226 Mini-ribonuclease 3 family GYO_0123 89a2926cd5477fcafd8681433ab26ce1 143 Gene3D G3DSA:1.10.1520.10 4 143 1.4E-53 T 14-10-2018 IPR036389 Ribonuclease III, endonuclease domain superfamily GO:0004525|GO:0006396 GYO_0123 89a2926cd5477fcafd8681433ab26ce1 143 Pfam PF00636 Ribonuclease III domain 17 116 4.3E-17 T 14-10-2018 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 Reactome: R-HSA-203927 GYO_0123 89a2926cd5477fcafd8681433ab26ce1 143 SMART SM00535 1 134 1.1E-19 T 14-10-2018 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 Reactome: R-HSA-203927 GYO_0408 970308bae993be7eb78ad2cd66e62b63 417 Gene3D G3DSA:1.20.1250.20 1 407 4.8E-55 T 14-10-2018 GYO_0408 970308bae993be7eb78ad2cd66e62b63 417 SUPERFAMILY SSF103473 4 405 6.93E-62 T 14-10-2018 IPR036259 MFS transporter superfamily GYO_0408 970308bae993be7eb78ad2cd66e62b63 417 Pfam PF07690 Major Facilitator Superfamily 17 275 2.2E-31 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 GYO_1344 28f27160cbc588daa22abb748e0b55d0 192 PIRSF PIRSF011560 4 191 2.5E-78 T 14-10-2018 IPR010461 Competence protein ComK GO:0030420 GYO_1344 28f27160cbc588daa22abb748e0b55d0 192 Pfam PF06338 ComK protein 10 158 8.1E-61 T 14-10-2018 IPR010461 Competence protein ComK GO:0030420 GYO_3531 0b5fcdea9dc7b70616df9509b6a48db7 273 Pfam PF01925 Sulfite exporter TauE/SafE 7 265 6.3E-57 T 14-10-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 GYO_4338 3ecbada70f0dcc80f4e9fabffe88e7ef 121 Pfam PF16888 Domain of unknown function (DUF5082) 9 115 1.5E-12 T 14-10-2018 IPR031681 Protein of unknown function DUF5082 GYO_4338 3ecbada70f0dcc80f4e9fabffe88e7ef 121 ProDom PD338809 BH2346 YXIB BH4015 BH0976 PREFOLDIN 9 100 3.0E-44 T 14-10-2018 GYO_0911 bf817e90aee3891d0cd8cba1fc0f6cbc 195 SUPERFAMILY SSF53328 3 186 1.31E-59 T 14-10-2018 IPR036477 Formyl transferase, N-terminal domain superfamily GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 GYO_0911 bf817e90aee3891d0cd8cba1fc0f6cbc 195 Gene3D G3DSA:3.40.50.170 1 193 7.5E-72 T 14-10-2018 GYO_0911 bf817e90aee3891d0cd8cba1fc0f6cbc 195 TIGRFAM TIGR00639 PurN: phosphoribosylglycinamide formyltransferase 2 190 1.1E-80 T 14-10-2018 IPR004607 Phosphoribosylglycinamide formyltransferase GO:0004644|GO:0006189 KEGG: 00230+2.1.2.2|KEGG: 00670+2.1.2.2|MetaCyc: PWY-6121|MetaCyc: PWY-6613|Reactome: R-HSA-73817 GYO_0911 bf817e90aee3891d0cd8cba1fc0f6cbc 195 Hamap MF_01930 Phosphoribosylglycinamide formyltransferase [purN]. 3 188 30.653 T 14-10-2018 IPR004607 Phosphoribosylglycinamide formyltransferase GO:0004644|GO:0006189 KEGG: 00230+2.1.2.2|KEGG: 00670+2.1.2.2|MetaCyc: PWY-6121|MetaCyc: PWY-6613|Reactome: R-HSA-73817 GYO_0911 bf817e90aee3891d0cd8cba1fc0f6cbc 195 ProSitePatterns PS00373 Phosphoribosylglycinamide formyltransferase active site. 134 157 - T 14-10-2018 IPR001555 Phosphoribosylglycinamide formyltransferase, active site KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 GYO_0911 bf817e90aee3891d0cd8cba1fc0f6cbc 195 Pfam PF00551 Formyl transferase 2 182 3.2E-67 T 14-10-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 GYO_3943 2d39d6eff1cff50f03023b442df06295 328 Gene3D G3DSA:1.10.260.150 56 328 6.4E-77 T 14-10-2018 GYO_3943 2d39d6eff1cff50f03023b442df06295 328 TIGRFAM TIGR00350 lytR_cpsA_psr: cell envelope-related function transcriptional attenuator common domain 94 243 1.9E-38 T 14-10-2018 IPR004474 Cell envelope-related transcriptional attenuator domain GYO_3943 2d39d6eff1cff50f03023b442df06295 328 Pfam PF03816 Cell envelope-related transcriptional attenuator domain 95 243 2.1E-42 T 14-10-2018 IPR004474 Cell envelope-related transcriptional attenuator domain GYO_3270 a2b936dada72ff39e0fc90acdcb726f4 389 Gene3D G3DSA:3.40.640.10 56 286 2.3E-134 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 GYO_3270 a2b936dada72ff39e0fc90acdcb726f4 389 ProSitePatterns PS00599 Aminotransferases class-II pyridoxal-phosphate attachment site. 234 243 - T 14-10-2018 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site GO:0016740 GYO_3270 a2b936dada72ff39e0fc90acdcb726f4 389 SUPERFAMILY SSF53383 5 387 2.02E-105 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase GYO_3270 a2b936dada72ff39e0fc90acdcb726f4 389 TIGRFAM TIGR00858 bioF: 8-amino-7-oxononanoate synthase 20 379 3.8E-153 T 14-10-2018 IPR004723 8-amino-7-oxononanoate synthase, Archaea/Proteobacteria type GO:0008710|GO:0009102 KEGG: 00780+2.3.1.47|MetaCyc: PWY-6519|MetaCyc: PWY-6578|MetaCyc: PWY-7147 GYO_3270 a2b936dada72ff39e0fc90acdcb726f4 389 Pfam PF00155 Aminotransferase class I and II 40 378 9.0E-65 T 14-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 GYO_3270 a2b936dada72ff39e0fc90acdcb726f4 389 Gene3D G3DSA:3.90.1150.10 15 376 2.3E-134 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 GYO_2501 354cc0e7226e434493578882e903dfca 148 Gene3D G3DSA:3.30.70.141 1 148 5.7E-64 T 14-10-2018 IPR036850 Nucleoside diphosphate kinase-like domain superfamily KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 GYO_2501 354cc0e7226e434493578882e903dfca 148 ProSitePatterns PS00469 Nucleoside diphosphate kinases active site. 112 120 - T 14-10-2018 IPR023005 Nucleoside diphosphate kinase, active site KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 GYO_2501 354cc0e7226e434493578882e903dfca 148 SUPERFAMILY SSF54919 1 148 4.84E-62 T 14-10-2018 IPR036850 Nucleoside diphosphate kinase-like domain superfamily KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 GYO_2501 354cc0e7226e434493578882e903dfca 148 SMART SM00562 1 138 1.6E-90 T 14-10-2018 IPR034907 Nucleoside diphosphate kinase-like domain KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 GYO_2501 354cc0e7226e434493578882e903dfca 148 Pfam PF00334 Nucleoside diphosphate kinase 2 135 8.0E-59 T 14-10-2018 IPR034907 Nucleoside diphosphate kinase-like domain KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 GYO_2501 354cc0e7226e434493578882e903dfca 148 PRINTS PR01243 Nucleoside diphosphate kinase signature 68 85 1.3E-51 T 14-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 GYO_2501 354cc0e7226e434493578882e903dfca 148 PRINTS PR01243 Nucleoside diphosphate kinase signature 89 105 1.3E-51 T 14-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 GYO_2501 354cc0e7226e434493578882e903dfca 148 PRINTS PR01243 Nucleoside diphosphate kinase signature 48 67 1.3E-51 T 14-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 GYO_2501 354cc0e7226e434493578882e903dfca 148 PRINTS PR01243 Nucleoside diphosphate kinase signature 112 131 1.3E-51 T 14-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 GYO_2501 354cc0e7226e434493578882e903dfca 148 PRINTS PR01243 Nucleoside diphosphate kinase signature 4 26 1.3E-51 T 14-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 GYO_2501 354cc0e7226e434493578882e903dfca 148 Hamap MF_00451 Nucleoside diphosphate kinase [ndk]. 1 136 37.05 T 14-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 GYO_2389 c3e36be9f737aaa8577d6d1e8c78dfb9 382 Pfam PF02333 Phytase 5 379 1.2E-221 T 14-10-2018 IPR003431 Beta propeller phytase GO:0016158 KEGG: 00562+3.1.3.8|MetaCyc: PWY-4702 GYO_2389 c3e36be9f737aaa8577d6d1e8c78dfb9 382 Gene3D G3DSA:2.120.10.30 28 382 4.2E-148 T 14-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like GYO_2389 c3e36be9f737aaa8577d6d1e8c78dfb9 382 SUPERFAMILY SSF50956 34 378 5.62E-94 T 14-10-2018 GYO_0492 f85af232c830c54ac3f23cb0d345f129 348 Gene3D G3DSA:3.20.20.30 17 348 5.1E-99 T 14-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 GYO_0492 f85af232c830c54ac3f23cb0d345f129 348 TIGRFAM TIGR03558 oxido_grp_1: luciferase family oxidoreductase, group 1 21 344 4.2E-121 T 14-10-2018 IPR019949 Luciferase family oxidoreductase, group 1 GYO_0492 f85af232c830c54ac3f23cb0d345f129 348 SUPERFAMILY SSF51679 20 344 5.54E-74 T 14-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 GYO_0492 f85af232c830c54ac3f23cb0d345f129 348 Pfam PF00296 Luciferase-like monooxygenase 33 316 1.8E-33 T 14-10-2018 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 GYO_2143 3dc64f60ebe8f9661b9259bc89fe45c6 205 Pfam PF13761 Domain of unknown function (DUF4166) 15 198 5.7E-51 T 14-10-2018 IPR025311 Domain of unknown function DUF4166 GYO_3764 5fcaf0ca9164031e0c77839f0efad2f9 344 Gene3D G3DSA:3.90.550.10 1 257 3.2E-57 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases GYO_3764 5fcaf0ca9164031e0c77839f0efad2f9 344 Pfam PF00535 Glycosyl transferase family 2 7 170 2.8E-38 T 14-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 GYO_3764 5fcaf0ca9164031e0c77839f0efad2f9 344 SUPERFAMILY SSF53448 4 228 1.29E-58 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases GYO_3326 90157ec2d63dfde74d02599ab1e65f9d 346 Pfam PF02322 Cytochrome bd terminal oxidase subunit II 8 335 6.5E-35 T 14-10-2018 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 GYO_1062 5972bbfdef8a2eff96d6dd649095984d 373 Pfam PF04055 Radical SAM superfamily 37 190 1.9E-12 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 GYO_1062 5972bbfdef8a2eff96d6dd649095984d 373 TIGRFAM TIGR04478 rSAM_YfkAB: radical SAM/CxCxxxxC motif protein YfkAB 9 371 3.3E-200 T 14-10-2018 IPR031004 Radical SAM/CxCxxxxC motif protein YfkAB GYO_1062 5972bbfdef8a2eff96d6dd649095984d 373 SUPERFAMILY SSF102114 32 328 2.62E-29 T 14-10-2018 GYO_1062 5972bbfdef8a2eff96d6dd649095984d 373 Gene3D G3DSA:3.20.20.70 23 296 1.5E-24 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 GYO_1062 5972bbfdef8a2eff96d6dd649095984d 373 Pfam PF08756 YfkB-like domain 221 371 8.7E-80 T 14-10-2018 IPR014866 YfkB-like domain GYO_1062 5972bbfdef8a2eff96d6dd649095984d 373 Pfam PF13353 4Fe-4S single cluster domain 41 113 8.1E-6 T 14-10-2018 GYO_2209 8fce5eb2e3f9cd60802fa2b3bc400b16 181 Pfam PF00589 Phage integrase family 22 164 4.8E-25 T 14-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 GYO_2209 8fce5eb2e3f9cd60802fa2b3bc400b16 181 Gene3D G3DSA:1.10.443.10 7 179 9.6E-33 T 14-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 GYO_2209 8fce5eb2e3f9cd60802fa2b3bc400b16 181 SUPERFAMILY SSF56349 6 179 1.09E-39 T 14-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 GYO_2318 6462dfc0e7e89bb7425681ffd885f444 352 Pfam PF00487 Fatty acid desaturase 57 297 1.5E-34 T 14-10-2018 IPR005804 Fatty acid desaturase domain GO:0006629 GYO_2852 72cd57909ad738d3666fca637d030348 367 Gene3D G3DSA:3.40.50.1100 100 196 7.9E-97 T 14-10-2018 GYO_2852 72cd57909ad738d3666fca637d030348 367 Gene3D G3DSA:3.40.50.1100 51 366 7.9E-97 T 14-10-2018 GYO_2852 72cd57909ad738d3666fca637d030348 367 SUPERFAMILY SSF53686 4 365 5.37E-90 T 14-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme GYO_2852 72cd57909ad738d3666fca637d030348 367 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 68 361 4.3E-67 T 14-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme GYO_2852 72cd57909ad738d3666fca637d030348 367 ProSitePatterns PS00165 Serine/threonine dehydratases pyridoxal-phosphate attachment site. 92 105 - T 14-10-2018 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site GO:0006520|GO:0030170 GYO_3780 521ef449339ea05db1a0c01870591e77 473 Gene3D G3DSA:2.115.10.20 29 467 9.2E-179 T 14-10-2018 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily GYO_3780 521ef449339ea05db1a0c01870591e77 473 SUPERFAMILY SSF75005 35 472 6.57E-111 T 14-10-2018 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily GYO_3780 521ef449339ea05db1a0c01870591e77 473 Pfam PF02435 Levansucrase/Invertase 40 469 5.4E-162 T 14-10-2018 IPR003469 Glycoside hydrolase, family 68 GO:0009758|GO:0050053 GYO_3896 9a7eb74f62932f721be5869fb1c15993 331 Pfam PF03816 Cell envelope-related transcriptional attenuator domain 96 247 4.1E-52 T 14-10-2018 IPR004474 Cell envelope-related transcriptional attenuator domain GYO_3896 9a7eb74f62932f721be5869fb1c15993 331 TIGRFAM TIGR00350 lytR_cpsA_psr: cell envelope-related function transcriptional attenuator common domain 95 248 4.7E-55 T 14-10-2018 IPR004474 Cell envelope-related transcriptional attenuator domain GYO_3896 9a7eb74f62932f721be5869fb1c15993 331 Gene3D G3DSA:1.10.260.150 73 330 1.8E-99 T 14-10-2018 GYO_2165 52b5443ac4e8f252ba0fb5d0a85b0b92 124 SUPERFAMILY SSF49764 29 111 3.49E-8 T 14-10-2018 IPR008978 HSP20-like chaperone GYO_2165 52b5443ac4e8f252ba0fb5d0a85b0b92 124 Gene3D G3DSA:2.60.40.790 30 111 2.1E-10 T 14-10-2018 IPR008978 HSP20-like chaperone GYO_3997 fffbafb9d51f14ac27a5dcb6ea2e5fea 212 TIGRFAM TIGR01076 sortase_fam: sortase 82 204 1.2E-17 T 14-10-2018 IPR005754 Sortase family GYO_3997 fffbafb9d51f14ac27a5dcb6ea2e5fea 212 SUPERFAMILY SSF63817 38 206 5.89E-41 T 14-10-2018 IPR023365 Sortase domain superfamily GYO_3997 fffbafb9d51f14ac27a5dcb6ea2e5fea 212 Pfam PF04203 Sortase family 84 205 4.1E-24 T 14-10-2018 IPR005754 Sortase family GYO_3997 fffbafb9d51f14ac27a5dcb6ea2e5fea 212 Gene3D G3DSA:2.40.260.10 56 211 2.5E-40 T 14-10-2018 IPR023365 Sortase domain superfamily GYO_3252 017d052d857fbe42c663f0a7c32db948 544 PIRSF PIRSF038958 1 541 7.1E-156 T 14-10-2018 IPR024923 Peptidoglycan biosynthesis protein, SpoVB-type GYO_3252 017d052d857fbe42c663f0a7c32db948 544 Pfam PF14667 Polysaccharide biosynthesis C-terminal domain 375 523 7.7E-31 T 14-10-2018 IPR029303 Polysaccharide biosynthesis protein, C-terminal domain GYO_3252 017d052d857fbe42c663f0a7c32db948 544 Pfam PF01943 Polysaccharide biosynthesis protein 5 319 1.4E-80 T 14-10-2018 IPR002797 Polysaccharide biosynthesis protein GO:0016020 GYO_3856 9b316b1e8cc8baddce920b3468bda4f5 77 Pfam PF09964 Uncharacterized protein conserved in bacteria (DUF2198) 5 75 4.6E-30 T 14-10-2018 IPR019242 Protein of unknown function DUF2198 GYO_1123 0abe61f2f175b3f77b1245a9b10393d6 50 Pfam PF08176 Small acid-soluble spore protein K family 2 48 4.9E-29 T 14-10-2018 IPR012611 Small acid-soluble spore protein, SspK GO:0030436|GO:0042601 GYO_1123 0abe61f2f175b3f77b1245a9b10393d6 50 Hamap MF_01504 Small, acid-soluble spore protein K [sspK]. 2 50 17.821 T 14-10-2018 IPR012611 Small acid-soluble spore protein, SspK GO:0030436|GO:0042601 GYO_1123 0abe61f2f175b3f77b1245a9b10393d6 50 TIGRFAM TIGR03091 SASP_sspK: small, acid-soluble spore protein K 17 48 4.1E-23 T 14-10-2018 IPR012611 Small acid-soluble spore protein, SspK GO:0030436|GO:0042601 GYO_4267 c6e8e908ab23a15e37e841017055ea4a 295 Pfam PF13732 Domain of unknown function (DUF4162) 208 293 4.1E-12 T 14-10-2018 IPR025302 Domain of unknown function DUF4162 GYO_4267 c6e8e908ab23a15e37e841017055ea4a 295 Pfam PF00005 ABC transporter 17 155 1.3E-30 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 GYO_4267 c6e8e908ab23a15e37e841017055ea4a 295 Gene3D G3DSA:3.40.50.300 1 232 7.1E-69 T 14-10-2018 GYO_4267 c6e8e908ab23a15e37e841017055ea4a 295 SMART SM00382 26 203 1.0E-13 T 14-10-2018 IPR003593 AAA+ ATPase domain GYO_4267 c6e8e908ab23a15e37e841017055ea4a 295 ProSitePatterns PS00211 ABC transporters family signature. 128 142 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 GYO_4267 c6e8e908ab23a15e37e841017055ea4a 295 SUPERFAMILY SSF52540 2 218 6.32E-64 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase GYO_1298 b2db5c5e2f6e9422bcaef769eadf4ddd 247 Gene3D G3DSA:3.40.50.300 1 245 1.7E-63 T 14-10-2018 GYO_1298 b2db5c5e2f6e9422bcaef769eadf4ddd 247 SMART SM00382 28 213 1.5E-9 T 14-10-2018 IPR003593 AAA+ ATPase domain GYO_1298 b2db5c5e2f6e9422bcaef769eadf4ddd 247 Pfam PF00005 ABC transporter 19 162 4.9E-29 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 GYO_1298 b2db5c5e2f6e9422bcaef769eadf4ddd 247 SUPERFAMILY SSF52540 3 230 3.44E-56 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase GYO_2297 af222c2a7a0616ad2d3356d8744bc587 102 Pfam PF17094 Uncharacterised protein family (UPF0715) 2 100 1.6E-39 T 14-10-2018 IPR031374 Uncharacterised protein family UPF0715 GYO_2297 af222c2a7a0616ad2d3356d8744bc587 102 ProDom PD015812 YOPD YWLA YOAG 1 101 4.0E-48 T 14-10-2018 IPR031374 Uncharacterised protein family UPF0715 GYO_1496 5ee6ea34674545f2b8595695b069c941 180 SUPERFAMILY SSF55729 1 175 1.03E-45 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase GYO_1496 5ee6ea34674545f2b8595695b069c941 180 Gene3D G3DSA:3.40.630.30 1 178 5.5E-49 T 14-10-2018 GYO_1496 5ee6ea34674545f2b8595695b069c941 180 Pfam PF13302 Acetyltransferase (GNAT) domain 7 151 7.1E-23 T 14-10-2018 IPR000182 GNAT domain GYO_2731 224de92d0de1fef9e8851e5886b1330e 115 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 6 26 - T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site GYO_2731 224de92d0de1fef9e8851e5886b1330e 115 ProDom PD073895 COMPETENCE COMGE LATE MACHINERY MEMBRANE OPERON DNA THE METHYLATION PART 1 115 5.0E-41 T 14-10-2018 IPR020488 Competence operon G, ComGE GYO_2750 6a8de01398dfff6eb8644febd1f2a7cc 69 SUPERFAMILY SSF158379 1 60 2.48E-22 T 14-10-2018 IPR023164 YqgQ-like superfamily GYO_2750 6a8de01398dfff6eb8644febd1f2a7cc 69 Pfam PF06014 Bacterial protein of unknown function (DUF910) 1 60 1.8E-26 T 14-10-2018 IPR009256 Protein of unknown function DUF910 GYO_2750 6a8de01398dfff6eb8644febd1f2a7cc 69 Gene3D G3DSA:1.10.287.760 1 69 6.3E-31 T 14-10-2018 IPR023164 YqgQ-like superfamily GYO_4012 fbf8397983d49822098c4eb008a10089 452 Gene3D G3DSA:1.20.1720.10 10 244 7.7E-41 T 14-10-2018 GYO_4012 fbf8397983d49822098c4eb008a10089 452 SUPERFAMILY SSF103473 4 444 1.83E-64 T 14-10-2018 IPR036259 MFS transporter superfamily GYO_4012 fbf8397983d49822098c4eb008a10089 452 Gene3D G3DSA:1.20.1250.20 255 451 2.3E-21 T 14-10-2018 GYO_4012 fbf8397983d49822098c4eb008a10089 452 Pfam PF07690 Major Facilitator Superfamily 15 406 2.4E-58 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 GYO_2130 f870dd249120f1e93cd97e8d408d9408 239 Gene3D G3DSA:2.60.120.1270 28 239 6.1E-90 T 14-10-2018 IPR038682 YrpD-like superfamily GYO_2130 f870dd249120f1e93cd97e8d408d9408 239 Pfam PF15493 Domain of unknown function, YrpD 37 237 7.2E-87 T 14-10-2018 IPR029143 Protein of unknown function, YrpD GYO_4050 6d465ba8315eb2dcae1ac8eb768f282f 246 SUPERFAMILY SSF143842 31 244 1.96E-72 T 14-10-2018 IPR036209 YwmB-like superfamily GYO_4050 6d465ba8315eb2dcae1ac8eb768f282f 246 Gene3D G3DSA:3.30.2030.10 31 170 1.1E-46 T 14-10-2018 GYO_4050 6d465ba8315eb2dcae1ac8eb768f282f 246 Gene3D G3DSA:3.30.360.40 171 246 1.2E-32 T 14-10-2018 GYO_4050 6d465ba8315eb2dcae1ac8eb768f282f 246 Pfam PF08680 TATA-box binding 48 246 4.2E-58 T 14-10-2018 IPR014794 TATA-box binding GYO_3054 7fd2742d4492b3e72542cf1e27eceaa6 341 Gene3D G3DSA:3.90.1200.10 92 318 4.2E-20 T 14-10-2018 GYO_3054 7fd2742d4492b3e72542cf1e27eceaa6 341 SUPERFAMILY SSF56112 6 314 2.33E-18 T 14-10-2018 IPR011009 Protein kinase-like domain superfamily GYO_3054 7fd2742d4492b3e72542cf1e27eceaa6 341 Gene3D G3DSA:3.30.200.20 4 91 3.7E-9 T 14-10-2018 GYO_3054 7fd2742d4492b3e72542cf1e27eceaa6 341 TIGRFAM TIGR02904 spore_ysxE: spore coat protein YsxE 6 311 3.0E-105 T 14-10-2018 IPR014253 Spore coat protein YsxE GYO_3411 befcd6596e9770e48272a4284ce9ed23 245 Hamap MF_00727 Protein-glutamine gamma-glutamyltransferase [tgl]. 1 245 54.494 T 14-10-2018 IPR020916 Protein-glutamine gamma-glutamyltransferase, bacteria GO:0003810 GYO_3411 befcd6596e9770e48272a4284ce9ed23 245 ProDom PD119415 TRANSGLUTAMINASE TRANSFERASE ACYLTRANSFERASE GAMMA-GLUTAMYLTRANSFERASE PROTEIN-GLUTAMINE TGASE SPORULATION TGL 1 245 3.0E-138 T 14-10-2018 IPR020916 Protein-glutamine gamma-glutamyltransferase, bacteria GO:0003810 GYO_0326 35f8e4c6ab092334e95ddf5e06f2c244 584 SUPERFAMILY SSF49842 447 554 8.29E-9 T 14-10-2018 IPR008983 Tumour necrosis factor-like domain superfamily GO:0005515 GYO_0247 35f8e4c6ab092334e95ddf5e06f2c244 584 SUPERFAMILY SSF49842 447 554 8.29E-9 T 14-10-2018 IPR008983 Tumour necrosis factor-like domain superfamily GO:0005515 GYO_0593 2bc3b382033308516175a4105ca75bbf 382 SUPERFAMILY SSF48452 102 212 2.73E-7 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 GYO_0593 2bc3b382033308516175a4105ca75bbf 382 SUPERFAMILY SSF48452 179 300 9.01E-16 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 GYO_0593 2bc3b382033308516175a4105ca75bbf 382 SMART SM00028 102 135 250.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 GYO_0593 2bc3b382033308516175a4105ca75bbf 382 SMART SM00028 263 296 0.74 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 GYO_0593 2bc3b382033308516175a4105ca75bbf 382 SMART SM00028 183 216 49.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 GYO_0593 2bc3b382033308516175a4105ca75bbf 382 SMART SM00028 142 175 160.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 GYO_0593 2bc3b382033308516175a4105ca75bbf 382 SMART SM00028 223 256 2.5E-5 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 GYO_0593 2bc3b382033308516175a4105ca75bbf 382 Gene3D G3DSA:1.25.40.10 1 382 3.8E-128 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 GYO_0593 2bc3b382033308516175a4105ca75bbf 382 Pfam PF13424 Tetratricopeptide repeat 223 294 4.3E-9 T 14-10-2018 GYO_3661 a3c52e9ea342ee0fd1b118917dd050ac 222 Gene3D G3DSA:3.40.30.10 29 221 1.3E-61 T 14-10-2018 GYO_3661 a3c52e9ea342ee0fd1b118917dd050ac 222 SUPERFAMILY SSF52833 44 216 1.69E-38 T 14-10-2018 IPR036249 Thioredoxin-like superfamily GYO_3661 a3c52e9ea342ee0fd1b118917dd050ac 222 Pfam PF13462 Thioredoxin 47 217 1.7E-37 T 14-10-2018 IPR012336 Thioredoxin-like fold GYO_1256 0cc5e1e7f9f939deb894ff2200e4a447 247 Gene3D G3DSA:3.30.1600.10 28 170 9.6E-69 T 14-10-2018 IPR026591 Sirtuin, catalytic core small domain superfamily GYO_1256 0cc5e1e7f9f939deb894ff2200e4a447 247 SUPERFAMILY SSF52467 2 241 2.62E-72 T 14-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily GYO_1256 0cc5e1e7f9f939deb894ff2200e4a447 247 Hamap MF_01968 NAD-dependent protein deacetylase [cobB]. 3 244 59.938 T 14-10-2018 IPR028628 Sirtuin, class U GO:0034979|GO:0051287 GYO_1256 0cc5e1e7f9f939deb894ff2200e4a447 247 Pfam PF02146 Sir2 family 19 198 9.0E-55 T 14-10-2018 IPR003000 Sirtuin family GO:0070403 GYO_1256 0cc5e1e7f9f939deb894ff2200e4a447 247 Gene3D G3DSA:3.40.50.1220 10 241 9.6E-69 T 14-10-2018 GYO_2603 239e7fa6e730e7d52d9272a8f123e753 385 ProSitePatterns PS00428 Cell cycle proteins ftsW / rodA / spoVE signature. 333 357 - T 14-10-2018 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site GO:0016021 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 GYO_2603 239e7fa6e730e7d52d9272a8f123e753 385 Pfam PF01098 Cell cycle protein 12 376 1.5E-101 T 14-10-2018 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA GO:0016021|GO:0051301 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 GYO_2603 239e7fa6e730e7d52d9272a8f123e753 385 TIGRFAM TIGR02210 rodA_shape: rod shape-determining protein RodA 9 375 7.3E-108 T 14-10-2018 IPR011923 Probable peptidoglycan glycosyltransferase RodA/MrdB GO:0008360|GO:0016021 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 GYO_3748 019c1e655ba73aa7fec0e38665580416 421 Gene3D G3DSA:3.40.190.10 147 406 1.2E-104 T 14-10-2018 GYO_3748 019c1e655ba73aa7fec0e38665580416 421 PRINTS PR00181 Maltose binding protein signature 248 267 1.8E-7 T 14-10-2018 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein GO:0008643|GO:0015144 GYO_3748 019c1e655ba73aa7fec0e38665580416 421 PRINTS PR00181 Maltose binding protein signature 78 96 1.8E-7 T 14-10-2018 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein GO:0008643|GO:0015144 GYO_3748 019c1e655ba73aa7fec0e38665580416 421 PRINTS PR00181 Maltose binding protein signature 373 392 1.8E-7 T 14-10-2018 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein GO:0008643|GO:0015144 GYO_3748 019c1e655ba73aa7fec0e38665580416 421 PRINTS PR00181 Maltose binding protein signature 138 157 1.8E-7 T 14-10-2018 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein GO:0008643|GO:0015144 GYO_3748 019c1e655ba73aa7fec0e38665580416 421 SUPERFAMILY SSF53850 41 409 4.63E-82 T 14-10-2018 GYO_3748 019c1e655ba73aa7fec0e38665580416 421 Pfam PF13416 Bacterial extracellular solute-binding protein 55 358 1.1E-49 T 14-10-2018 IPR006059 Bacterial extracellular solute-binding protein GYO_3748 019c1e655ba73aa7fec0e38665580416 421 Gene3D G3DSA:3.40.190.10 56 373 1.2E-104 T 14-10-2018 GYO_3518 2a5647b7bca5376ad7561233cdc3a5e9 352 SUPERFAMILY SSF53686 4 346 2.1E-107 T 14-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme GYO_3518 2a5647b7bca5376ad7561233cdc3a5e9 352 Gene3D G3DSA:3.40.50.1100 12 321 4.6E-125 T 14-10-2018 GYO_3518 2a5647b7bca5376ad7561233cdc3a5e9 352 ProSitePatterns PS00165 Serine/threonine dehydratases pyridoxal-phosphate attachment site. 50 63 - T 14-10-2018 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site GO:0006520|GO:0030170 GYO_3518 2a5647b7bca5376ad7561233cdc3a5e9 352 Gene3D G3DSA:3.40.50.1100 58 154 4.6E-125 T 14-10-2018 GYO_3518 2a5647b7bca5376ad7561233cdc3a5e9 352 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 23 315 2.0E-77 T 14-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme GYO_3518 2a5647b7bca5376ad7561233cdc3a5e9 352 TIGRFAM TIGR00260 thrC: threonine synthase 6 322 3.8E-116 T 14-10-2018 IPR004450 Threonine synthase-like GYO_3518 2a5647b7bca5376ad7561233cdc3a5e9 352 PIRSF PIRSF038945 1 347 9.9E-162 T 14-10-2018 IPR026260 Threonine synthase, bacterial/archaeal GO:0004795|GO:0009088 KEGG: 00260+4.2.3.1|KEGG: 00750+4.2.3.1 GYO_0752 f713fff1c06716623bcd7e332f21d4ca 287 Pfam PF00892 EamA-like transporter family 7 129 5.4E-15 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 GYO_0752 f713fff1c06716623bcd7e332f21d4ca 287 Pfam PF00892 EamA-like transporter family 149 279 2.7E-14 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 GYO_0752 f713fff1c06716623bcd7e332f21d4ca 287 SUPERFAMILY SSF103481 182 281 1.7E-7 T 14-10-2018 GYO_0752 f713fff1c06716623bcd7e332f21d4ca 287 SUPERFAMILY SSF103481 43 143 1.22E-7 T 14-10-2018 GYO_3460 69426277422352eb6d5a93139463c33d 73 Pfam PF05952 Bacillus competence pheromone ComX 6 44 8.0E-7 T 14-10-2018 IPR009233 Competence pheromone ComX, Bacillus GYO_0144 b1fd2ffbf4d286a836f115f245747684 207 Gene3D G3DSA:3.40.1370.10 3 207 3.6E-84 T 14-10-2018 IPR023574 Ribosomal protein L4 domain superfamily GO:0003735|GO:0005840|GO:0006412 GYO_0144 b1fd2ffbf4d286a836f115f245747684 207 Pfam PF00573 Ribosomal protein L4/L1 family 17 204 3.7E-74 T 14-10-2018 IPR002136 Ribosomal protein L4/L1e GO:0003735|GO:0005840|GO:0006412 GYO_0144 b1fd2ffbf4d286a836f115f245747684 207 TIGRFAM TIGR03953 rplD_bact: 50S ribosomal protein uL4 17 204 1.8E-84 T 14-10-2018 IPR013005 50S ribosomal protein uL4 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 GYO_0144 b1fd2ffbf4d286a836f115f245747684 207 Hamap MF_01328_B 50S ribosomal protein L4 [rplD]. 9 207 38.143 T 14-10-2018 IPR013005 50S ribosomal protein uL4 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 GYO_0144 b1fd2ffbf4d286a836f115f245747684 207 SUPERFAMILY SSF52166 1 206 8.24E-85 T 14-10-2018 IPR023574 Ribosomal protein L4 domain superfamily GO:0003735|GO:0005840|GO:0006412 GYO_0739 7afff74bad20021201c514a6deb44dac 261 Gene3D G3DSA:1.10.260.40 1 64 1.5E-23 T 14-10-2018 GYO_0739 7afff74bad20021201c514a6deb44dac 261 Pfam PF01381 Helix-turn-helix 9 61 4.6E-14 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 GYO_0739 7afff74bad20021201c514a6deb44dac 261 SUPERFAMILY SSF47413 1 67 1.13E-18 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 GYO_0739 7afff74bad20021201c514a6deb44dac 261 SMART SM00530 6 61 9.8E-15 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 GYO_1227 df4a459dec4f40c388749bbd5864d67f 508 Pfam PF05552 Conserved TM helix 3 49 3.8E-13 T 14-10-2018 IPR008910 Conserved TM helix GYO_1227 df4a459dec4f40c388749bbd5864d67f 508 Pfam PF05552 Conserved TM helix 190 237 1.1E-15 T 14-10-2018 IPR008910 Conserved TM helix GYO_1227 df4a459dec4f40c388749bbd5864d67f 508 Pfam PF05552 Conserved TM helix 285 332 1.0E-11 T 14-10-2018 IPR008910 Conserved TM helix GYO_1227 df4a459dec4f40c388749bbd5864d67f 508 Pfam PF05552 Conserved TM helix 94 138 1.3E-7 T 14-10-2018 IPR008910 Conserved TM helix GYO_3390 effcc0b717e49667c5ff6730a611b4b5 282 SUPERFAMILY SSF82057 199 277 2.78E-16 T 14-10-2018 GYO_3390 effcc0b717e49667c5ff6730a611b4b5 282 SMART SM00047 40 198 8.4E-76 T 14-10-2018 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain GO:0004040 GYO_3390 effcc0b717e49667c5ff6730a611b4b5 282 Gene3D G3DSA:2.30.30.170 198 279 4.1E-15 T 14-10-2018 IPR038200 GW domain superfamily KEGG: 00511+3.2.1.96|MetaCyc: PWY-7883 GYO_3390 effcc0b717e49667c5ff6730a611b4b5 282 Gene3D G3DSA:1.10.530.10 51 197 6.4E-51 T 14-10-2018 GYO_3390 effcc0b717e49667c5ff6730a611b4b5 282 PRINTS PR01002 Flagellar protein FlgJ signature 46 69 1.9E-9 T 14-10-2018 GYO_3390 effcc0b717e49667c5ff6730a611b4b5 282 PRINTS PR01002 Flagellar protein FlgJ signature 155 174 1.9E-9 T 14-10-2018 GYO_3390 effcc0b717e49667c5ff6730a611b4b5 282 PRINTS PR01002 Flagellar protein FlgJ signature 175 193 1.9E-9 T 14-10-2018 GYO_3390 effcc0b717e49667c5ff6730a611b4b5 282 PRINTS PR01002 Flagellar protein FlgJ signature 70 88 1.9E-9 T 14-10-2018 GYO_3390 effcc0b717e49667c5ff6730a611b4b5 282 Pfam PF13457 SH3-like domain 205 276 2.4E-13 T 14-10-2018 IPR025987 GW domain KEGG: 00511+3.2.1.96|MetaCyc: PWY-7883 GYO_3390 effcc0b717e49667c5ff6730a611b4b5 282 Gene3D G3DSA:4.10.80.30 102 127 6.4E-51 T 14-10-2018 GYO_3390 effcc0b717e49667c5ff6730a611b4b5 282 Pfam PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase 59 193 3.2E-24 T 14-10-2018 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain GO:0004040 GYO_2412 a2f7d62e35e181ae8bdb95d0ce5380f2 205 Pfam PF01966 HD domain 29 128 9.7E-9 T 14-10-2018 IPR006674 HD domain GYO_2412 a2f7d62e35e181ae8bdb95d0ce5380f2 205 Gene3D G3DSA:1.20.58.1910 101 205 2.0E-43 T 14-10-2018 GYO_2412 a2f7d62e35e181ae8bdb95d0ce5380f2 205 Gene3D G3DSA:1.10.472.50 1 100 3.0E-35 T 14-10-2018 GYO_2412 a2f7d62e35e181ae8bdb95d0ce5380f2 205 SMART SM00471 22 138 1.3E-8 T 14-10-2018 IPR003607 HD/PDEase domain GYO_2412 a2f7d62e35e181ae8bdb95d0ce5380f2 205 SUPERFAMILY SSF109604 4 197 4.19E-58 T 14-10-2018 GYO_1279 7271a30c8837cae3afa9df6388ce215d 255 SUPERFAMILY SSF52096 1 254 1.57E-68 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily GYO_1279 7271a30c8837cae3afa9df6388ce215d 255 Gene3D G3DSA:1.10.12.10 199 254 3.1E-16 T 14-10-2018 IPR014748 Enoyl-CoA hydratase, C-terminal GYO_1279 7271a30c8837cae3afa9df6388ce215d 255 Pfam PF00378 Enoyl-CoA hydratase/isomerase 8 254 5.2E-49 T 14-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 GYO_1279 7271a30c8837cae3afa9df6388ce215d 255 Gene3D G3DSA:3.90.226.10 1 188 1.1E-55 T 14-10-2018 GYO_4472 5ab12471fc9d2f9c4934ba82b6ca029b 160 PIRSF PIRSF006716 1 160 4.4E-92 T 14-10-2018 IPR016493 Spore coat protein CotF GYO_4472 5ab12471fc9d2f9c4934ba82b6ca029b 160 Pfam PF07875 Coat F domain 82 138 2.0E-22 T 14-10-2018 IPR012851 Spore coat protein CotF-like GYO_0623 b9e86dc1df98caee338f1b3e67fc7557 257 SUPERFAMILY SSF88713 3 251 1.63E-102 T 14-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 GYO_0623 b9e86dc1df98caee338f1b3e67fc7557 257 Gene3D G3DSA:3.20.20.370 2 255 2.6E-106 T 14-10-2018 GYO_0623 b9e86dc1df98caee338f1b3e67fc7557 257 Hamap MF_00691 UPF0271 protein YbgL [ybgL]. 2 246 48.156 T 14-10-2018 IPR005501 UPF0271 family, LamB/YcsF/PxpA KEGG: 00480+3.5.2.9|MetaCyc: PWY-4041|MetaCyc: PWY-7942 GYO_0623 b9e86dc1df98caee338f1b3e67fc7557 257 Pfam PF03746 LamB/YcsF family 4 242 1.1E-105 T 14-10-2018 IPR005501 UPF0271 family, LamB/YcsF/PxpA KEGG: 00480+3.5.2.9|MetaCyc: PWY-4041|MetaCyc: PWY-7942 GYO_3295 88df90c906573d7aac5c0774a19103ae 328 PRINTS PR02026 YtrC/YtrD probable ABC transporter permease signature 262 281 2.5E-42 T 14-10-2018 IPR023264 ABC transporter, acetoin utilisation, predicted permease Ytrc/YtrD GYO_3295 88df90c906573d7aac5c0774a19103ae 328 PRINTS PR02026 YtrC/YtrD probable ABC transporter permease signature 92 106 2.5E-42 T 14-10-2018 IPR023264 ABC transporter, acetoin utilisation, predicted permease Ytrc/YtrD GYO_3295 88df90c906573d7aac5c0774a19103ae 328 PRINTS PR02026 YtrC/YtrD probable ABC transporter permease signature 152 166 2.5E-42 T 14-10-2018 IPR023264 ABC transporter, acetoin utilisation, predicted permease Ytrc/YtrD GYO_3295 88df90c906573d7aac5c0774a19103ae 328 PRINTS PR02026 YtrC/YtrD probable ABC transporter permease signature 169 181 2.5E-42 T 14-10-2018 IPR023264 ABC transporter, acetoin utilisation, predicted permease Ytrc/YtrD GYO_3295 88df90c906573d7aac5c0774a19103ae 328 PRINTS PR02026 YtrC/YtrD probable ABC transporter permease signature 242 256 2.5E-42 T 14-10-2018 IPR023264 ABC transporter, acetoin utilisation, predicted permease Ytrc/YtrD GYO_3295 88df90c906573d7aac5c0774a19103ae 328 Pfam PF12679 ABC-2 family transporter protein 72 258 3.1E-7 T 14-10-2018 IPR032688 ABC-2 family transporter protein GO:0055085 GYO_1483 a1292e6cbf84b0e40a85e34521e6005e 128 Pfam PF07552 Spore Coat Protein X and V domain 79 127 1.9E-5 T 14-10-2018 IPR011428 Spore coat protein X/V GO:0030435|GO:0031160 GYO_1483 a1292e6cbf84b0e40a85e34521e6005e 128 Pfam PF07552 Spore Coat Protein X and V domain 6 63 5.2E-16 T 14-10-2018 IPR011428 Spore coat protein X/V GO:0030435|GO:0031160 GYO_2822 f0d6b85bd3df9b1060ed7cd3ecada103 368 TIGRFAM TIGR01441 GPR: GPR endopeptidase 11 368 2.6E-209 T 14-10-2018 IPR005080 Peptidase A25, germination protease GO:0006508|GO:0008233|GO:0009847 GYO_2822 f0d6b85bd3df9b1060ed7cd3ecada103 368 Pfam PF03418 Germination protease 18 367 2.5E-192 T 14-10-2018 IPR005080 Peptidase A25, germination protease GO:0006508|GO:0008233|GO:0009847 GYO_2822 f0d6b85bd3df9b1060ed7cd3ecada103 368 PIRSF PIRSF019549 4 368 7.1E-191 T 14-10-2018 IPR005080 Peptidase A25, germination protease GO:0006508|GO:0008233|GO:0009847 GYO_2822 f0d6b85bd3df9b1060ed7cd3ecada103 368 ProDom PD041835 PROTEASE GERMINATION HYDROLASE SPORE GPR ENDOPEPTIDASE PROTEINASE ZYMOGEN PRECURSOR PEPTIDASE 10 368 0.0 T 14-10-2018 IPR005080 Peptidase A25, germination protease GO:0006508|GO:0008233|GO:0009847 GYO_2822 f0d6b85bd3df9b1060ed7cd3ecada103 368 SUPERFAMILY SSF53163 5 367 3.27E-131 T 14-10-2018 IPR023430 Peptidase HybD-like domain superfamily GYO_2822 f0d6b85bd3df9b1060ed7cd3ecada103 368 Hamap MF_00626 Germination protease [gpr]. 1 368 162.434 T 14-10-2018 IPR005080 Peptidase A25, germination protease GO:0006508|GO:0008233|GO:0009847 GYO_2041 61edbe8352359d39efbcdf83118f1817 428 SUPERFAMILY SSF63411 285 426 7.33E-16 T 14-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 GYO_2041 61edbe8352359d39efbcdf83118f1817 428 Gene3D G3DSA:3.30.830.10 239 426 5.3E-38 T 14-10-2018 GYO_2041 61edbe8352359d39efbcdf83118f1817 428 SUPERFAMILY SSF63411 15 221 4.02E-42 T 14-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 GYO_2041 61edbe8352359d39efbcdf83118f1817 428 Gene3D G3DSA:3.30.830.10 8 238 1.5E-59 T 14-10-2018 GYO_2041 61edbe8352359d39efbcdf83118f1817 428 Pfam PF05193 Peptidase M16 inactive domain 183 361 1.1E-16 T 14-10-2018 IPR007863 Peptidase M16, C-terminal GYO_2041 61edbe8352359d39efbcdf83118f1817 428 Pfam PF00675 Insulinase (Peptidase family M16) 65 176 9.0E-17 T 14-10-2018 IPR011765 Peptidase M16, N-terminal GYO_1300 42e291ae0accdfee51ab9d11c1e24cb4 236 ProDom PD038378 ECSC YDBA CC1715 BH1193 ECSC-LIKE ESCC 1 229 3.0E-118 T 14-10-2018 GYO_1300 42e291ae0accdfee51ab9d11c1e24cb4 236 Pfam PF12787 EcsC protein family 8 229 6.3E-68 T 14-10-2018 IPR024787 EcsC protein GYO_0810 95d5dd2ffa650d2c76f29770c97ad59b 273 Pfam PF01261 Xylose isomerase-like TIM barrel 22 211 7.7E-28 T 14-10-2018 IPR013022 Xylose isomerase-like, TIM barrel domain GYO_0810 95d5dd2ffa650d2c76f29770c97ad59b 273 Gene3D G3DSA:3.20.20.150 2 242 6.0E-56 T 14-10-2018 GYO_0810 95d5dd2ffa650d2c76f29770c97ad59b 273 SUPERFAMILY SSF51658 5 243 5.76E-53 T 14-10-2018 IPR036237 Xylose isomerase-like superfamily GYO_4504 1125aad229c71b9adeca224de833bb42 95 SUPERFAMILY SSF54995 1 95 1.96E-34 T 14-10-2018 IPR035980 Ribosomal protein S6 superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 GYO_4504 1125aad229c71b9adeca224de833bb42 95 ProSitePatterns PS01048 Ribosomal protein S6 signature. 44 53 - T 14-10-2018 IPR020815 Ribosomal protein S6, conserved site GO:0003735|GO:0005840|GO:0006412|GO:0019843 GYO_4504 1125aad229c71b9adeca224de833bb42 95 TIGRFAM TIGR00166 S6: ribosomal protein bS6 1 94 9.7E-36 T 14-10-2018 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 GYO_4504 1125aad229c71b9adeca224de833bb42 95 Gene3D G3DSA:3.30.70.60 1 95 3.3E-36 T 14-10-2018 IPR014717 Translation elongation factor EF1B/ribosomal protein S6 GYO_4504 1125aad229c71b9adeca224de833bb42 95 Pfam PF01250 Ribosomal protein S6 3 92 4.0E-29 T 14-10-2018 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 GYO_4504 1125aad229c71b9adeca224de833bb42 95 Hamap MF_00360 30S ribosomal protein S6 [rpsF]. 1 95 23.544 T 14-10-2018 IPR020814 Ribosomal protein S6, plastid/chloroplast GO:0003735|GO:0005840|GO:0006412|GO:0019843 GYO_2064 0f5e0ca8c28d166690da6329276c0bd3 225 Gene3D G3DSA:3.60.15.10 12 222 1.8E-52 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like GYO_2064 0f5e0ca8c28d166690da6329276c0bd3 225 SMART SM00849 18 181 4.6E-34 T 14-10-2018 IPR001279 Metallo-beta-lactamase GYO_2064 0f5e0ca8c28d166690da6329276c0bd3 225 SUPERFAMILY SSF56281 10 215 1.13E-42 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like GYO_2064 0f5e0ca8c28d166690da6329276c0bd3 225 Pfam PF00753 Metallo-beta-lactamase superfamily 19 181 4.1E-10 T 14-10-2018 IPR001279 Metallo-beta-lactamase GYO_4334 138d2a5462a81be448dd518cfeb8eb60 612 TIGRFAM TIGR00830 PTBA: PTS system, glucose subfamily, IIA component 467 587 2.0E-48 T 14-10-2018 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 GYO_4334 138d2a5462a81be448dd518cfeb8eb60 612 Pfam PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 466 591 1.1E-53 T 14-10-2018 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 GYO_4334 138d2a5462a81be448dd518cfeb8eb60 612 SUPERFAMILY SSF51261 461 609 1.5E-55 T 14-10-2018 IPR011055 Duplicated hybrid motif GYO_4334 138d2a5462a81be448dd518cfeb8eb60 612 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 19 36 - T 14-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 GYO_4334 138d2a5462a81be448dd518cfeb8eb60 612 Gene3D G3DSA:2.70.70.10 456 611 4.2E-60 T 14-10-2018 IPR011055 Duplicated hybrid motif GYO_4334 138d2a5462a81be448dd518cfeb8eb60 612 Gene3D G3DSA:3.30.1360.60 1 76 1.3E-27 T 14-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 GYO_4334 138d2a5462a81be448dd518cfeb8eb60 612 SUPERFAMILY SSF55604 6 80 3.66E-22 T 14-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 GYO_4334 138d2a5462a81be448dd518cfeb8eb60 612 Pfam PF02378 Phosphotransferase system, EIIC 107 386 1.2E-37 T 14-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 GYO_4334 138d2a5462a81be448dd518cfeb8eb60 612 ProSitePatterns PS00371 PTS EIIA domains phosphorylation site signature 1. 529 541 - T 14-10-2018 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 GYO_4334 138d2a5462a81be448dd518cfeb8eb60 612 TIGRFAM TIGR01995 PTS-II-ABC-beta: PTS system, beta-glucoside-specific IIABC component 3 610 9.7E-228 T 14-10-2018 IPR011297 Phosphotransferase system, beta-glucoside-specific IIABC component GO:0005886|GO:0008982|GO:0009401 GYO_4334 138d2a5462a81be448dd518cfeb8eb60 612 Pfam PF00367 phosphotransferase system, EIIB 8 41 3.8E-15 T 14-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 GYO_0222 b392d1a9c43fd0e4aed2f6525b45b1fb 292 Pfam PF10668 Phage terminase small subunit 1 60 6.2E-28 T 14-10-2018 IPR018925 Phage terminase small subunit GYO_0301 b392d1a9c43fd0e4aed2f6525b45b1fb 292 Pfam PF10668 Phage terminase small subunit 1 60 6.2E-28 T 14-10-2018 IPR018925 Phage terminase small subunit GYO_3654 b9268bdf28848d7d16abc5e2f0bb356c 670 TIGRFAM TIGR00831 a_cpa1: Na+/H+ antiporter 9 522 8.5E-104 T 14-10-2018 IPR004705 Cation/H+ exchanger, CPA1 family, bacteria GO:0006812|GO:0015299|GO:0016021 GYO_3654 b9268bdf28848d7d16abc5e2f0bb356c 670 Pfam PF00999 Sodium/hydrogen exchanger family 6 414 2.8E-68 T 14-10-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 GYO_0025 0d5afe262f27ccf27bbb8e53d6f773ff 107 Gene3D G3DSA:3.30.1310.10 2 107 4.7E-39 T 14-10-2018 IPR036894 Nucleoid-associated protein YbaB-like domain superfamily GYO_0025 0d5afe262f27ccf27bbb8e53d6f773ff 107 Pfam PF02575 YbaB/EbfC DNA-binding family 12 102 2.9E-34 T 14-10-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family GYO_0025 0d5afe262f27ccf27bbb8e53d6f773ff 107 TIGRFAM TIGR00103 DNA_YbaB_EbfC: DNA-binding protein, YbaB/EbfC family 1 106 1.1E-35 T 14-10-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family GYO_0025 0d5afe262f27ccf27bbb8e53d6f773ff 107 PIRSF PIRSF004555 4 107 2.1E-39 T 14-10-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family GYO_0025 0d5afe262f27ccf27bbb8e53d6f773ff 107 Hamap MF_00274 Nucleoid-associated protein YbaB [ybaB]. 6 100 23.458 T 14-10-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family GYO_0025 0d5afe262f27ccf27bbb8e53d6f773ff 107 SUPERFAMILY SSF82607 12 106 6.41E-34 T 14-10-2018 IPR036894 Nucleoid-associated protein YbaB-like domain superfamily GYO_0839 65e00fc3fbca4ad958c84a17ced84311 103 Gene3D G3DSA:3.40.50.2300 3 103 2.2E-34 T 14-10-2018 GYO_0839 65e00fc3fbca4ad958c84a17ced84311 103 SUPERFAMILY SSF52794 2 102 4.97E-34 T 14-10-2018 IPR036095 PTS system IIB component-like superfamily GO:0008982|GO:0009401 GYO_0839 65e00fc3fbca4ad958c84a17ced84311 103 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 3 95 4.7E-21 T 14-10-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 GYO_3909 83a23a91dd4d5ef4bb8f72e340bf1af6 488 Pfam PF04932 O-Antigen ligase 263 410 8.4E-16 T 14-10-2018 IPR007016 O-antigen ligase-related GYO_0641 e825c14a20ae2769acedcbe75a551cae 269 Hamap MF_02077 Lipid II flippase Amj [amj]. 5 267 27.14 T 14-10-2018 IPR021260 Lipid II flippase Amj GYO_0641 e825c14a20ae2769acedcbe75a551cae 269 Pfam PF10997 Alternate to MurJ 15 265 1.2E-97 T 14-10-2018 IPR021260 Lipid II flippase Amj GYO_3907 f46589528d33c18dff49dc245f3ad063 252 SUPERFAMILY SSF53448 6 226 4.64E-57 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases GYO_3907 f46589528d33c18dff49dc245f3ad063 252 Pfam PF00535 Glycosyl transferase family 2 9 113 5.9E-38 T 14-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 GYO_3907 f46589528d33c18dff49dc245f3ad063 252 Gene3D G3DSA:3.90.550.10 1 250 3.2E-60 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases GYO_3120 e7a1f42b33c872c28089201ee6f88318 184 Pfam PF08006 Protein of unknown function (DUF1700) 1 181 8.4E-47 T 14-10-2018 IPR012963 Protein of unknown function DUF1700 GYO_2837 c915ec6f7d558907d24ec4d7d463846c 366 Pfam PF01926 50S ribosome-binding GTPase 162 226 8.3E-13 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 GYO_2837 c915ec6f7d558907d24ec4d7d463846c 366 TIGRFAM TIGR03597 GTPase_YqeH: ribosome biogenesis GTPase YqeH 6 366 1.4E-161 T 14-10-2018 IPR019988 GTP-binding protein, riobosome biogenesis, YqeH GYO_2837 c915ec6f7d558907d24ec4d7d463846c 366 Gene3D G3DSA:3.40.50.300 56 224 1.8E-49 T 14-10-2018 GYO_2837 c915ec6f7d558907d24ec4d7d463846c 366 SUPERFAMILY SSF52540 62 278 1.53E-31 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase GYO_4399 bab1a93c7e60dbbdc09ebc655e88be66 191 SUPERFAMILY SSF48498 79 186 1.11E-27 T 14-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily GYO_4399 bab1a93c7e60dbbdc09ebc655e88be66 191 Pfam PF00440 Bacterial regulatory proteins, tetR family 11 58 7.4E-16 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 GYO_4399 bab1a93c7e60dbbdc09ebc655e88be66 191 SUPERFAMILY SSF46689 6 75 1.18E-16 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 GYO_4399 bab1a93c7e60dbbdc09ebc655e88be66 191 Gene3D G3DSA:1.10.357.10 1 191 1.7E-74 T 14-10-2018 GYO_4399 bab1a93c7e60dbbdc09ebc655e88be66 191 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 11 24 5.2E-5 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 GYO_4399 bab1a93c7e60dbbdc09ebc655e88be66 191 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 32 55 5.2E-5 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 GYO_0090 b1120187edb0da8482039ed5d5383f23 293 ProSitePatterns PS00770 Aminotransferases class-IV signature. 179 208 - T 14-10-2018 IPR018300 Aminotransferase, class IV, conserved site GO:0003824 Reactome: R-HSA-70895 GYO_0090 b1120187edb0da8482039ed5d5383f23 293 Gene3D G3DSA:3.20.10.10 126 277 9.3E-40 T 14-10-2018 GYO_0090 b1120187edb0da8482039ed5d5383f23 293 Pfam PF01063 Amino-transferase class IV 28 253 7.4E-49 T 14-10-2018 IPR001544 Aminotransferase class IV GO:0003824 Reactome: R-HSA-70895 GYO_0090 b1120187edb0da8482039ed5d5383f23 293 Gene3D G3DSA:3.30.470.10 1 117 2.0E-32 T 14-10-2018 GYO_0090 b1120187edb0da8482039ed5d5383f23 293 SUPERFAMILY SSF56752 1 275 3.27E-67 T 14-10-2018 IPR036038 Aminotransferase-like, PLP-dependent enzymes GO:0003824 Reactome: R-HSA-70895 GYO_3863 44c29e7671017e51a32da74f3d786d94 111 ProDom PD072806 SWRA MOTILITY YVZD SWARMING MOTILITY-SWARMING 1 111 7.0E-60 T 14-10-2018 IPR035388 Swarming motility protein SwrA GYO_3863 44c29e7671017e51a32da74f3d786d94 111 Pfam PF17423 Swarming motility protein 1 110 2.2E-55 T 14-10-2018 IPR035388 Swarming motility protein SwrA GYO_3659 48b18017fdb5a6d65262bc2cd3fe81d7 202 Pfam PF03458 UPF0126 domain 5 78 1.3E-19 T 14-10-2018 IPR005115 Uncharacterised domain UPF0126 GYO_3659 48b18017fdb5a6d65262bc2cd3fe81d7 202 Pfam PF03458 UPF0126 domain 92 161 1.3E-18 T 14-10-2018 IPR005115 Uncharacterised domain UPF0126 GYO_2169 a92a681807802e74a0fe8f760b370a0f 170 Pfam PF00578 AhpC/TSA family 36 152 6.6E-30 T 14-10-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 GYO_2169 a92a681807802e74a0fe8f760b370a0f 170 SUPERFAMILY SSF52833 33 168 1.89E-41 T 14-10-2018 IPR036249 Thioredoxin-like superfamily GYO_2169 a92a681807802e74a0fe8f760b370a0f 170 Gene3D G3DSA:3.40.30.10 21 169 6.9E-48 T 14-10-2018 GYO_1758 18a17b02dbe21255586307991fa4b5eb 152 Gene3D G3DSA:3.40.30.10 1 148 2.5E-39 T 14-10-2018 GYO_1758 18a17b02dbe21255586307991fa4b5eb 152 SUPERFAMILY SSF52833 2 141 2.32E-32 T 14-10-2018 IPR036249 Thioredoxin-like superfamily GYO_1758 18a17b02dbe21255586307991fa4b5eb 152 Pfam PF00578 AhpC/TSA family 5 125 6.7E-12 T 14-10-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 GYO_2176 29750d85b5acc81a37323a0f8fd4051a 193 Hamap MF_01043 Glycerol-3-phosphate acyltransferase [plsY]. 5 191 20.607 T 14-10-2018 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 GYO_2176 29750d85b5acc81a37323a0f8fd4051a 193 Pfam PF02660 Glycerol-3-phosphate acyltransferase 9 182 6.6E-53 T 14-10-2018 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 GYO_2176 29750d85b5acc81a37323a0f8fd4051a 193 TIGRFAM TIGR00023 TIGR00023: acyl-phosphate glycerol 3-phosphate acyltransferase 1 192 2.8E-76 T 14-10-2018 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 GYO_2176 29750d85b5acc81a37323a0f8fd4051a 193 SMART SM01207 8 183 9.5E-83 T 14-10-2018 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 GYO_0273 c549d32a6711a2ce8d47f83dfd8211b1 177 Gene3D G3DSA:1.10.260.40 7 62 3.3E-6 T 14-10-2018 GYO_0194 c549d32a6711a2ce8d47f83dfd8211b1 177 Gene3D G3DSA:1.10.260.40 7 62 3.3E-6 T 14-10-2018 GYO_4182 f3376d893ae5c262fc91e6380e4c40df 440 Pfam PF00860 Permease family 2 391 3.6E-98 T 14-10-2018 IPR006043 Xanthine/uracil/vitamin C permease GO:0016020|GO:0022857|GO:0055085 GYO_4182 f3376d893ae5c262fc91e6380e4c40df 440 ProSitePatterns PS01116 Xanthine/uracil permeases family signature. 337 357 - T 14-10-2018 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 Reactome: R-HSA-196836 GYO_1251 3dd60d23ae8c95546e9bba7a9d145794 118 Pfam PF02537 CrcB-like protein, Camphor Resistance (CrcB) 6 113 3.4E-20 T 14-10-2018 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 GYO_1251 3dd60d23ae8c95546e9bba7a9d145794 118 Hamap MF_00454 Putative fluoride ion transporter CrcB [crcB]. 3 118 18.098 T 14-10-2018 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 GYO_1251 3dd60d23ae8c95546e9bba7a9d145794 118 TIGRFAM TIGR00494 crcB: protein CrcB 5 117 7.9E-38 T 14-10-2018 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 GYO_3462 d87482df47d6ca62166c6c7371641d82 46 Pfam PF08181 DegQ (SacQ) family 1 46 1.1E-29 T 14-10-2018 IPR012554 Degradation enzyme regulation protein DegQ GO:1900192 GYO_3462 d87482df47d6ca62166c6c7371641d82 46 ProDom PD014716 DEGQ ENZYME DEGRADATION SACQ REGULATORY REGULATION FACTOR 1 46 9.0E-19 T 14-10-2018 IPR012554 Degradation enzyme regulation protein DegQ GO:1900192 GYO_2977 0b8c0517bb477116357b31bcec74ddea 360 Gene3D G3DSA:1.10.8.1150 46 119 1.6E-26 T 14-10-2018 GYO_2977 0b8c0517bb477116357b31bcec74ddea 360 TIGRFAM TIGR00247 TIGR00247: conserved hypothetical protein, YceG family 8 360 8.1E-155 T 14-10-2018 IPR003770 Endolytic murein transglycosylase GYO_2977 0b8c0517bb477116357b31bcec74ddea 360 Gene3D G3DSA:3.30.160.60 325 360 1.5E-7 T 14-10-2018 GYO_2977 0b8c0517bb477116357b31bcec74ddea 360 Hamap MF_02065 Endolytic murein transglycosylase [mltG]. 18 357 34.411 T 14-10-2018 IPR003770 Endolytic murein transglycosylase GYO_2977 0b8c0517bb477116357b31bcec74ddea 360 Pfam PF02618 YceG-like family 52 351 6.7E-84 T 14-10-2018 IPR003770 Endolytic murein transglycosylase GYO_1033 088175cfc3129c9d21fe908bbbb56c96 43 Pfam PF11121 Protein of unknown function (DUF2639) 2 39 4.7E-23 T 14-10-2018 IPR022580 Protein of unknown function DUF2639 GYO_1033 088175cfc3129c9d21fe908bbbb56c96 43 ProDom PD049467 YFLJ 1 43 4.0E-17 T 14-10-2018 IPR022580 Protein of unknown function DUF2639 GYO_4419 acc9a7cf7923946a6978109255222d61 622 TIGRFAM TIGR01995 PTS-II-ABC-beta: PTS system, beta-glucoside-specific IIABC component 8 620 7.7E-197 T 14-10-2018 IPR011297 Phosphotransferase system, beta-glucoside-specific IIABC component GO:0005886|GO:0008982|GO:0009401 GYO_4419 acc9a7cf7923946a6978109255222d61 622 Pfam PF00367 phosphotransferase system, EIIB 13 40 1.4E-10 T 14-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 GYO_4419 acc9a7cf7923946a6978109255222d61 622 SUPERFAMILY SSF55604 11 86 5.49E-18 T 14-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 GYO_4419 acc9a7cf7923946a6978109255222d61 622 Gene3D G3DSA:2.70.70.10 463 621 1.8E-58 T 14-10-2018 IPR011055 Duplicated hybrid motif GYO_4419 acc9a7cf7923946a6978109255222d61 622 ProSitePatterns PS00371 PTS EIIA domains phosphorylation site signature 1. 538 550 - T 14-10-2018 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 GYO_4419 acc9a7cf7923946a6978109255222d61 622 Pfam PF02378 Phosphotransferase system, EIIC 111 392 1.6E-29 T 14-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 GYO_4419 acc9a7cf7923946a6978109255222d61 622 SUPERFAMILY SSF51261 470 620 6.63E-56 T 14-10-2018 IPR011055 Duplicated hybrid motif GYO_4419 acc9a7cf7923946a6978109255222d61 622 TIGRFAM TIGR00830 PTBA: PTS system, glucose subfamily, IIA component 477 596 2.5E-44 T 14-10-2018 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 GYO_4419 acc9a7cf7923946a6978109255222d61 622 Pfam PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 475 599 7.3E-52 T 14-10-2018 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 GYO_4419 acc9a7cf7923946a6978109255222d61 622 Gene3D G3DSA:3.30.1360.60 4 82 1.9E-22 T 14-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 GYO_2197 420ec6683892c432746d531580d07367 188 Pfam PF13302 Acetyltransferase (GNAT) domain 18 157 9.4E-23 T 14-10-2018 IPR000182 GNAT domain GYO_2197 420ec6683892c432746d531580d07367 188 Gene3D G3DSA:3.40.630.30 12 184 4.0E-34 T 14-10-2018 GYO_2197 420ec6683892c432746d531580d07367 188 SUPERFAMILY SSF55729 9 183 3.88E-34 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase GYO_3722 87b326a870453c6302ba734f9d436d6f 222 Pfam PF13377 Periplasmic binding protein-like domain 53 216 8.2E-33 T 14-10-2018 GYO_3722 87b326a870453c6302ba734f9d436d6f 222 Gene3D G3DSA:3.40.50.2300 2 209 7.3E-77 T 14-10-2018 GYO_3722 87b326a870453c6302ba734f9d436d6f 222 SUPERFAMILY SSF53822 16 218 1.38E-43 T 14-10-2018 IPR028082 Periplasmic binding protein-like I GYO_3722 87b326a870453c6302ba734f9d436d6f 222 Gene3D G3DSA:3.40.50.2300 45 214 7.3E-77 T 14-10-2018 GYO_2128 957de41a13c6f35bfa17540c26f509fc 279 Hamap MF_00008 Thymidylate synthase [thyA]. 5 279 38.974 T 14-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 GYO_2128 957de41a13c6f35bfa17540c26f509fc 279 SUPERFAMILY SSF55831 3 279 7.46E-100 T 14-10-2018 IPR036926 Thymidylate synthase/dCMP hydroxymethylase superfamily KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 GYO_2128 957de41a13c6f35bfa17540c26f509fc 279 ProSitePatterns PS00091 Thymidylate synthase active site. 141 169 - T 14-10-2018 IPR020940 Thymidylate synthase, active site GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 GYO_2128 957de41a13c6f35bfa17540c26f509fc 279 TIGRFAM TIGR03284 thym_sym: thymidylate synthase 99 279 6.0E-52 T 14-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 GYO_2128 957de41a13c6f35bfa17540c26f509fc 279 Pfam PF00303 Thymidylate synthase 6 279 8.0E-92 T 14-10-2018 IPR023451 Thymidylate synthase/dCMP hydroxymethylase domain KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 GYO_2128 957de41a13c6f35bfa17540c26f509fc 279 PRINTS PR00108 Thymidylate synthase family signature 212 229 2.0E-33 T 14-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 GYO_2128 957de41a13c6f35bfa17540c26f509fc 279 PRINTS PR00108 Thymidylate synthase family signature 130 149 2.0E-33 T 14-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 GYO_2128 957de41a13c6f35bfa17540c26f509fc 279 PRINTS PR00108 Thymidylate synthase family signature 174 200 2.0E-33 T 14-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 GYO_2128 957de41a13c6f35bfa17540c26f509fc 279 PRINTS PR00108 Thymidylate synthase family signature 156 171 2.0E-33 T 14-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 GYO_2128 957de41a13c6f35bfa17540c26f509fc 279 PRINTS PR00108 Thymidylate synthase family signature 55 76 2.0E-33 T 14-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 GYO_2128 957de41a13c6f35bfa17540c26f509fc 279 Gene3D G3DSA:3.30.572.10 2 279 2.7E-120 T 14-10-2018 IPR036926 Thymidylate synthase/dCMP hydroxymethylase superfamily KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 GYO_2465 1f5563772cc46121d98ff89e64365617 56 Pfam PF14084 Protein of unknown function (DUF4264) 4 56 6.2E-25 T 14-10-2018 IPR012190 Uncharacterised conserved protein UCP036698, YpmA GYO_2465 1f5563772cc46121d98ff89e64365617 56 PIRSF PIRSF036698 1 56 2.0E-38 T 14-10-2018 IPR012190 Uncharacterised conserved protein UCP036698, YpmA GYO_1809 3e4e75225ac88d466c6a54c3445d6aac 142 Gene3D G3DSA:3.40.630.30 3 136 1.3E-8 T 14-10-2018 GYO_1809 3e4e75225ac88d466c6a54c3445d6aac 142 Pfam PF00583 Acetyltransferase (GNAT) family 14 116 3.4E-4 T 14-10-2018 IPR000182 GNAT domain GYO_1809 3e4e75225ac88d466c6a54c3445d6aac 142 SUPERFAMILY SSF55729 17 138 3.29E-9 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase GYO_3282 c96b46a48de308d7d11cd89fe155e04f 103 SMART SM00450 7 101 3.4E-20 T 14-10-2018 IPR001763 Rhodanese-like domain GYO_3282 c96b46a48de308d7d11cd89fe155e04f 103 Gene3D G3DSA:3.40.250.10 3 102 3.1E-30 T 14-10-2018 IPR036873 Rhodanese-like domain superfamily GYO_3282 c96b46a48de308d7d11cd89fe155e04f 103 Pfam PF00581 Rhodanese-like domain 9 96 3.0E-14 T 14-10-2018 IPR001763 Rhodanese-like domain GYO_3282 c96b46a48de308d7d11cd89fe155e04f 103 SUPERFAMILY SSF52821 2 99 2.49E-29 T 14-10-2018 IPR036873 Rhodanese-like domain superfamily GYO_3329 28b626896c764e5c2ab61b8e7b329adb 435 Gene3D G3DSA:1.10.10.10 296 420 4.3E-10 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily GYO_3329 28b626896c764e5c2ab61b8e7b329adb 435 SUPERFAMILY SSF81345 4 274 7.32E-29 T 14-10-2018 IPR037294 ABC transporter, BtuC-like GYO_3329 28b626896c764e5c2ab61b8e7b329adb 435 Gene3D G3DSA:1.10.3470.10 37 280 2.9E-6 T 14-10-2018 IPR037294 ABC transporter, BtuC-like GYO_3329 28b626896c764e5c2ab61b8e7b329adb 435 Pfam PF00950 ABC 3 transport family 10 276 3.9E-85 T 14-10-2018 IPR001626 ABC transporter, TroCD-like GO:0005887|GO:0042626|GO:0043190|GO:0055085 GYO_3979 ec7c214a21732aa56362c84bf800f5e0 183 Pfam PF14435 SUKH-4 immunity protein 25 176 4.5E-11 T 14-10-2018 IPR025851 SUKH-4 immunity protein GYO_3979 ec7c214a21732aa56362c84bf800f5e0 183 SUPERFAMILY SSF160631 28 121 1.96E-5 T 14-10-2018 GYO_3055 ee2a71fd96bbc2cf07776057a9edb934 768 SMART SM00257 717 761 1.8E-8 T 14-10-2018 IPR018392 LysM domain GYO_3055 ee2a71fd96bbc2cf07776057a9edb934 768 Gene3D G3DSA:3.10.350.10 708 768 6.5E-9 T 14-10-2018 IPR036779 LysM domain superfamily GYO_3055 ee2a71fd96bbc2cf07776057a9edb934 768 Pfam PF01476 LysM domain 719 761 2.8E-7 T 14-10-2018 IPR018392 LysM domain GYO_3055 ee2a71fd96bbc2cf07776057a9edb934 768 SUPERFAMILY SSF54106 717 761 2.09E-6 T 14-10-2018 GYO_2624 0e0d7ac2a68d484eb679ded71cd9ea16 544 SUPERFAMILY SSF53187 5 515 5.43E-25 T 14-10-2018 GYO_2624 0e0d7ac2a68d484eb679ded71cd9ea16 544 Pfam PF01546 Peptidase family M20/M25/M40 124 338 3.6E-10 T 14-10-2018 IPR002933 Peptidase M20 GO:0016787 GYO_2624 0e0d7ac2a68d484eb679ded71cd9ea16 544 PIRSF PIRSF010386 1 541 1.9E-235 T 14-10-2018 IPR012166 Uncharacterised protein family RocB GYO_2624 0e0d7ac2a68d484eb679ded71cd9ea16 544 Gene3D G3DSA:3.40.630.10 3 235 1.4E-35 T 14-10-2018 GYO_2170 504fa5635c7ca0a64659b24b58237601 63 Pfam PF13040 Fur-regulated basic protein B 24 62 7.8E-15 T 14-10-2018 IPR025004 Transcriptional regulatory protein SenN/SenS GYO_3596 c8f37f8f5e563a68e21fd5d70864665c 95 ProDom PD065427 YUSU IG COIL COILED BH3491 15 94 4.0E-39 T 14-10-2018 IPR020393 Uncharacterised protein family YusU GYO_3596 c8f37f8f5e563a68e21fd5d70864665c 95 Pfam PF10835 Protein of unknown function (DUF2573) 17 93 2.4E-42 T 14-10-2018 IPR020393 Uncharacterised protein family YusU GYO_1583 9fe04e5d72a778c0827d63caceb73923 1726 Gene3D G3DSA:1.10.530.10 1489 1616 1.0E-7 T 14-10-2018 GYO_1583 9fe04e5d72a778c0827d63caceb73923 1726 Pfam PF01464 Transglycosylase SLT domain 1495 1620 6.6E-22 T 14-10-2018 IPR008258 Transglycosylase SLT domain 1 GYO_1583 9fe04e5d72a778c0827d63caceb73923 1726 SUPERFAMILY SSF53955 1488 1582 1.0E-12 T 14-10-2018 IPR023346 Lysozyme-like domain superfamily GYO_2951 73f3a1debd60da16a6aa767d46a035da 638 SUPERFAMILY SSF52266 474 635 2.33E-17 T 14-10-2018 GYO_2951 73f3a1debd60da16a6aa767d46a035da 638 Gene3D G3DSA:3.40.50.1110 441 638 6.7E-14 T 14-10-2018 IPR036514 SGNH hydrolase superfamily GYO_2951 73f3a1debd60da16a6aa767d46a035da 638 Pfam PF01757 Acyltransferase family 12 345 7.6E-24 T 14-10-2018 IPR002656 Acyltransferase 3 GO:0016747 GYO_0558 2c41deae181b2bf2ce194e06d657a207 185 TIGRFAM TIGR03127 RuMP_HxlB: 6-phospho 3-hexuloisomerase 8 185 5.6E-75 T 14-10-2018 IPR017552 3-hexulose-6-phosphate isomerase GO:0016853 GYO_0558 2c41deae181b2bf2ce194e06d657a207 185 SUPERFAMILY SSF53697 4 184 5.87E-41 T 14-10-2018 GYO_0558 2c41deae181b2bf2ce194e06d657a207 185 Gene3D G3DSA:3.40.50.10490 1 185 5.0E-57 T 14-10-2018 GYO_0558 2c41deae181b2bf2ce194e06d657a207 185 Pfam PF01380 SIS domain 33 155 1.3E-21 T 14-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 GYO_3173 0a0236eb8fc19ba5b755aa5c4751350e 325 Hamap MF_00823 Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha [accA]. 4 315 48.795 T 14-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 GYO_3173 0a0236eb8fc19ba5b755aa5c4751350e 325 Gene3D G3DSA:3.90.226.10 2 316 1.5E-120 T 14-10-2018 GYO_3173 0a0236eb8fc19ba5b755aa5c4751350e 325 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 168 181 1.0E-47 T 14-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 GYO_3173 0a0236eb8fc19ba5b755aa5c4751350e 325 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 196 205 1.0E-47 T 14-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 GYO_3173 0a0236eb8fc19ba5b755aa5c4751350e 325 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 112 130 1.0E-47 T 14-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 GYO_3173 0a0236eb8fc19ba5b755aa5c4751350e 325 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 87 98 1.0E-47 T 14-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 GYO_3173 0a0236eb8fc19ba5b755aa5c4751350e 325 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 152 165 1.0E-47 T 14-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 GYO_3173 0a0236eb8fc19ba5b755aa5c4751350e 325 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 133 149 1.0E-47 T 14-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 GYO_3173 0a0236eb8fc19ba5b755aa5c4751350e 325 SUPERFAMILY SSF52096 6 313 2.49E-99 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily GYO_3173 0a0236eb8fc19ba5b755aa5c4751350e 325 Pfam PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit 5 147 1.2E-65 T 14-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 GYO_3173 0a0236eb8fc19ba5b755aa5c4751350e 325 TIGRFAM TIGR00513 accA: acetyl-CoA carboxylase, carboxyl transferase, alpha subunit 2 319 7.1E-173 T 14-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 GYO_2896 488b2f65ddf2c871d7818a3be196e116 119 Gene3D G3DSA:1.10.10.10 9 119 3.9E-31 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily GYO_2896 488b2f65ddf2c871d7818a3be196e116 119 Pfam PF01638 HxlR-like helix-turn-helix 29 117 1.2E-29 T 14-10-2018 IPR002577 Helix-turn-helix, HxlR type GYO_2896 488b2f65ddf2c871d7818a3be196e116 119 SUPERFAMILY SSF46785 18 114 1.41E-29 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily GYO_2503 9751d2f8dde2f220c59b0e7affea1225 233 TIGRFAM TIGR01934 MenG_MenH_UbiE: ubiquinone/menaquinone biosynthesis methyltransferase 9 233 1.1E-80 T 14-10-2018 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|Reactome: R-HSA-2142789 GYO_2503 9751d2f8dde2f220c59b0e7affea1225 233 Pfam PF01209 ubiE/COQ5 methyltransferase family 1 233 4.7E-113 T 14-10-2018 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|Reactome: R-HSA-2142789 GYO_2503 9751d2f8dde2f220c59b0e7affea1225 233 TIGRFAM TIGR02752 MenG_heptapren: demethylmenaquinone methyltransferase 3 233 9.3E-138 T 14-10-2018 IPR014122 Demethylmenaquinone methyltransferase GO:0008168|GO:0009234 KEGG: 00130+2.1.1.163|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895 GYO_2503 9751d2f8dde2f220c59b0e7affea1225 233 SUPERFAMILY SSF53335 4 227 1.67E-48 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase GYO_2503 9751d2f8dde2f220c59b0e7affea1225 233 ProSitePatterns PS01184 ubiE/COQ5 methyltransferase family signature 2. 141 155 - T 14-10-2018 IPR023576 UbiE/COQ5 methyltransferase, conserved site GO:0008168 KEGG: 00130+2.1.1.163|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895 GYO_2503 9751d2f8dde2f220c59b0e7affea1225 233 ProSitePatterns PS01183 ubiE/COQ5 methyltransferase family signature 1. 20 35 - T 14-10-2018 IPR023576 UbiE/COQ5 methyltransferase, conserved site GO:0008168 KEGG: 00130+2.1.1.163|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895 GYO_2503 9751d2f8dde2f220c59b0e7affea1225 233 Gene3D G3DSA:3.40.50.150 15 233 2.1E-65 T 14-10-2018 GYO_2503 9751d2f8dde2f220c59b0e7affea1225 233 Hamap MF_01813 Ubiquinone/menaquinone biosynthesis C-methyltransferase UbiE [ubiE]. 1 233 35.961 T 14-10-2018 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|Reactome: R-HSA-2142789 GYO_0707 a304476fc04fff85ec98203b3bcf20d9 413 SUPERFAMILY SSF103473 28 402 4.58E-53 T 14-10-2018 IPR036259 MFS transporter superfamily GYO_0707 a304476fc04fff85ec98203b3bcf20d9 413 Gene3D G3DSA:1.20.1250.20 25 217 7.4E-22 T 14-10-2018 GYO_0707 a304476fc04fff85ec98203b3bcf20d9 413 Pfam PF07690 Major Facilitator Superfamily 38 347 3.0E-34 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 GYO_0707 a304476fc04fff85ec98203b3bcf20d9 413 Gene3D G3DSA:1.20.1250.20 222 406 1.2E-17 T 14-10-2018 GYO_1122 e1c46de35204ac0d7aacadc29b9b6cf1 397 Pfam PF07690 Major Facilitator Superfamily 15 332 6.0E-35 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 GYO_1122 e1c46de35204ac0d7aacadc29b9b6cf1 397 SUPERFAMILY SSF103473 8 382 2.49E-54 T 14-10-2018 IPR036259 MFS transporter superfamily GYO_1122 e1c46de35204ac0d7aacadc29b9b6cf1 397 Gene3D G3DSA:1.20.1250.20 5 381 2.4E-47 T 14-10-2018 GYO_0689 2d14bf355a3b758d04c92728ad2c87b4 121 SUPERFAMILY SSF52091 5 115 6.47E-20 T 14-10-2018 IPR036513 STAS domain superfamily GYO_0689 2d14bf355a3b758d04c92728ad2c87b4 121 Pfam PF01740 STAS domain 12 101 8.0E-13 T 14-10-2018 IPR002645 STAS domain GYO_0689 2d14bf355a3b758d04c92728ad2c87b4 121 Gene3D G3DSA:3.30.750.24 3 119 2.8E-33 T 14-10-2018 IPR036513 STAS domain superfamily GYO_3684 2ece087e052cf3623302d1d85d8a916e 139 SUPERFAMILY SSF47413 2 66 6.47E-17 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 GYO_3684 2ece087e052cf3623302d1d85d8a916e 139 PIRSF PIRSF019364 1 139 5.7E-70 T 14-10-2018 IPR016759 HTH-type transcriptional repressor RghR GO:0006355 GYO_3684 2ece087e052cf3623302d1d85d8a916e 139 SMART SM00530 7 63 2.5E-15 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 GYO_3684 2ece087e052cf3623302d1d85d8a916e 139 Pfam PF13560 Helix-turn-helix domain 4 62 4.2E-15 T 14-10-2018 GYO_3684 2ece087e052cf3623302d1d85d8a916e 139 Gene3D G3DSA:1.10.260.40 4 135 1.3E-18 T 14-10-2018 GYO_4195 83f5dd79bb4f60fd5bb800b0d5388bcd 461 Pfam PF02378 Phosphotransferase system, EIIC 110 394 4.8E-52 T 14-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 GYO_4195 83f5dd79bb4f60fd5bb800b0d5388bcd 461 SUPERFAMILY SSF55604 6 79 2.22E-21 T 14-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 GYO_4195 83f5dd79bb4f60fd5bb800b0d5388bcd 461 TIGRFAM TIGR01996 PTS-II-BC-sucr: PTS system, sucrose-specific IIBC component 2 450 5.2E-196 T 14-10-2018 IPR010973 Phosphotransferase system, sucrose-specific IIBC component GO:0008982|GO:0009401|GO:0016021 GYO_4195 83f5dd79bb4f60fd5bb800b0d5388bcd 461 Gene3D G3DSA:3.30.1360.60 1 77 2.9E-28 T 14-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 GYO_4195 83f5dd79bb4f60fd5bb800b0d5388bcd 461 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 19 36 - T 14-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 GYO_4195 83f5dd79bb4f60fd5bb800b0d5388bcd 461 Pfam PF00367 phosphotransferase system, EIIB 8 41 6.6E-16 T 14-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 GYO_4195 83f5dd79bb4f60fd5bb800b0d5388bcd 461 TIGRFAM TIGR00852 pts-Glc: PTS system, maltose and glucose-specific subfamily, IIC component 153 439 4.8E-98 T 14-10-2018 IPR004719 Phosphotransferase system, maltose/glucose-specific subfamily IIC component GO:0008982|GO:0009401|GO:0016021 GYO_4195 83f5dd79bb4f60fd5bb800b0d5388bcd 461 TIGRFAM TIGR00826 EIIB_glc: PTS system, glucose-like IIB component 28 111 3.8E-21 T 14-10-2018 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 GYO_2257 3ec580d72e6b06991eaf075285b1f0cf 160 Pfam PF11188 Protein of unknown function (DUF2975) 31 160 2.9E-41 T 14-10-2018 IPR021354 Protein of unknown function DUF2975 GYO_1292 dc7bbd264a0a2178b8e349cbfe8a64c0 203 ProSitePatterns PS01117 MarR-type HTH domain signature. 76 110 - T 14-10-2018 IPR023187 Transcriptional regulator MarR-type, conserved site GYO_1292 dc7bbd264a0a2178b8e349cbfe8a64c0 203 Hamap MF_01911 HTH-type transcriptional regulator Hpr [hpr]. 2 185 50.147 T 14-10-2018 IPR023488 HTH-type transcriptional regulator Hpr GYO_1292 dc7bbd264a0a2178b8e349cbfe8a64c0 203 SMART SM00347 37 137 1.3E-24 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 GYO_1292 dc7bbd264a0a2178b8e349cbfe8a64c0 203 SUPERFAMILY SSF46785 21 131 5.15E-23 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily GYO_1292 dc7bbd264a0a2178b8e349cbfe8a64c0 203 Pfam PF01047 MarR family 44 101 3.4E-14 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 GYO_1292 dc7bbd264a0a2178b8e349cbfe8a64c0 203 Gene3D G3DSA:1.10.10.10 1 167 5.8E-48 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily GYO_0511 af8d55f0a710decd7e56efec81cb4ca1 512 Gene3D G3DSA:1.20.1720.10 14 221 1.2E-55 T 14-10-2018 GYO_0511 af8d55f0a710decd7e56efec81cb4ca1 512 SUPERFAMILY SSF103473 11 502 3.66E-76 T 14-10-2018 IPR036259 MFS transporter superfamily GYO_0511 af8d55f0a710decd7e56efec81cb4ca1 512 Pfam PF07690 Major Facilitator Superfamily 18 409 6.3E-57 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 GYO_0511 af8d55f0a710decd7e56efec81cb4ca1 512 TIGRFAM TIGR00711 efflux_EmrB: drug resistance MFS transporter, drug:H+ antiporter-2 (14 Spanner) (DHA2) family 14 495 7.2E-85 T 14-10-2018 IPR004638 Drug resistance transporter EmrB/QacA subfamily GO:0016021|GO:0022857|GO:0055085 GYO_0179 44caec3ab894d509f943f2ef91227f74 147 Pfam PF10730 Protein of unknown function (DUF2521) 1 147 1.4E-58 T 14-10-2018 IPR019667 Uncharacterised protein family YbaK GYO_2162 dc49c05d6f9ce2f0428db2031ff4a403 120 Gene3D G3DSA:3.40.50.2300 1 120 4.9E-33 T 14-10-2018 GYO_2162 dc49c05d6f9ce2f0428db2031ff4a403 120 SMART SM00448 2 114 2.5E-29 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 GYO_2162 dc49c05d6f9ce2f0428db2031ff4a403 120 Pfam PF00072 Response regulator receiver domain 4 114 9.6E-29 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 GYO_2162 dc49c05d6f9ce2f0428db2031ff4a403 120 SUPERFAMILY SSF52172 1 119 1.25E-33 T 14-10-2018 IPR011006 CheY-like superfamily GYO_1134 b2865ada1f6cbc026200a1cc9a96a621 85 TIGRFAM TIGR01442 SASP_gamma: small, acid-soluble spore protein, gamma-type 8 85 7.2E-28 T 14-10-2018 IPR006341 Acid-soluble spore protein, gamma-type GO:0030435 GYO_1134 b2865ada1f6cbc026200a1cc9a96a621 85 Pfam PF04259 Small, acid-soluble spore protein, gamma-type 9 85 4.2E-34 T 14-10-2018 IPR006341 Acid-soluble spore protein, gamma-type GO:0030435 GYO_1695 c1be89739308eabc9aa17a2868ef0a3b 145 ProSitePatterns PS01117 MarR-type HTH domain signature. 64 98 - T 14-10-2018 IPR023187 Transcriptional regulator MarR-type, conserved site GYO_1695 c1be89739308eabc9aa17a2868ef0a3b 145 Pfam PF01047 MarR family 32 89 1.2E-16 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 GYO_1695 c1be89739308eabc9aa17a2868ef0a3b 145 SUPERFAMILY SSF46785 5 140 1.19E-32 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily GYO_1695 c1be89739308eabc9aa17a2868ef0a3b 145 SMART SM00347 25 125 3.2E-24 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 GYO_1695 c1be89739308eabc9aa17a2868ef0a3b 145 PRINTS PR00598 Bacterial regulatory protein MarR family signature 66 81 1.6E-9 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 GYO_1695 c1be89739308eabc9aa17a2868ef0a3b 145 PRINTS PR00598 Bacterial regulatory protein MarR family signature 115 135 1.6E-9 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 GYO_1695 c1be89739308eabc9aa17a2868ef0a3b 145 PRINTS PR00598 Bacterial regulatory protein MarR family signature 85 101 1.6E-9 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 GYO_1695 c1be89739308eabc9aa17a2868ef0a3b 145 Gene3D G3DSA:1.10.10.10 1 141 5.0E-31 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily GYO_3685 b5f535b80478b14e520974af47ead7cb 108 Gene3D G3DSA:1.10.10.10 2 105 3.7E-34 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily GYO_3685 b5f535b80478b14e520974af47ead7cb 108 Pfam PF01638 HxlR-like helix-turn-helix 16 104 4.7E-34 T 14-10-2018 IPR002577 Helix-turn-helix, HxlR type GYO_3685 b5f535b80478b14e520974af47ead7cb 108 SUPERFAMILY SSF46785 2 103 8.56E-29 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily GYO_2923 3b7b91e0f84dab19c4cd84c46454daf8 273 Pfam PF00561 alpha/beta hydrolase fold 25 125 8.0E-16 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 GYO_2923 3b7b91e0f84dab19c4cd84c46454daf8 273 Gene3D G3DSA:3.40.50.1820 2 267 8.2E-45 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold GYO_2923 3b7b91e0f84dab19c4cd84c46454daf8 273 SUPERFAMILY SSF53474 7 265 7.42E-34 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold GYO_2605 205197aca8b52bff87cb2ca5d59fba24 79 ProDom PD058987 CYTOSOLIC YQKC 21 79 1.0E-28 T 14-10-2018 IPR020157 Uncharacterised protein family YqkC GYO_2605 205197aca8b52bff87cb2ca5d59fba24 79 Pfam PF10827 Protein of unknown function (DUF2552) 2 79 2.1E-45 T 14-10-2018 IPR020157 Uncharacterised protein family YqkC GYO_3157 ae4a185e4f15a56874625e7361c6a659 210 TIGRFAM TIGR02840 spore_YtaF: putative sporulation protein YtaF 4 210 3.7E-78 T 14-10-2018 IPR014205 Sporulation protein YtaF GYO_3157 ae4a185e4f15a56874625e7361c6a659 210 Pfam PF02659 Putative manganese efflux pump 127 208 2.8E-9 T 14-10-2018 IPR003810 Putative manganese efflux pump GYO_3157 ae4a185e4f15a56874625e7361c6a659 210 Pfam PF02659 Putative manganese efflux pump 2 82 2.6E-12 T 14-10-2018 IPR003810 Putative manganese efflux pump GYO_3091 516a0ec21fa3a6a7c763c887ac19b2f7 202 PIRSF PIRSF000170 1 202 4.7E-104 T 14-10-2018 IPR016002 Succinate dehydrogenase cytochrome b558 subunit, Firmicute GYO_3091 516a0ec21fa3a6a7c763c887ac19b2f7 202 Pfam PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit 91 192 2.3E-12 T 14-10-2018 IPR000701 Succinate dehydrogenase/fumarate reductase type B, transmembrane subunit GO:0016627 Reactome: R-HSA-611105|Reactome: R-HSA-71403 GYO_3091 516a0ec21fa3a6a7c763c887ac19b2f7 202 TIGRFAM TIGR02046 sdhC_b558_fam: succinate dehydrogenase (or fumarate reductase) cytochrome b subunit, b558 family 5 202 7.1E-72 T 14-10-2018 IPR011138 Succinate dehydrogenase cytochrome b558 subunit GYO_3091 516a0ec21fa3a6a7c763c887ac19b2f7 202 Gene3D G3DSA:1.20.1300.10 2 202 1.5E-47 T 14-10-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 GYO_3091 516a0ec21fa3a6a7c763c887ac19b2f7 202 SUPERFAMILY SSF81343 4 201 1.03E-60 T 14-10-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 GYO_0893 eeaacba45302d3217d5c612e8264494f 398 Pfam PF01882 Protein of unknown function DUF58 206 279 2.1E-18 T 14-10-2018 IPR002881 Domain of unknown function DUF58 GYO_3583 3709eb858ab3de67346bddab16ca79da 118 TIGRFAM TIGR01617 arsC_related: transcriptional regulator, Spx/MgsR family 3 117 2.6E-35 T 14-10-2018 IPR006504 Transcriptional regulator Spx/MgsR GYO_3583 3709eb858ab3de67346bddab16ca79da 118 Pfam PF03960 ArsC family 6 115 3.5E-17 T 14-10-2018 IPR006660 Arsenate reductase-like GYO_3583 3709eb858ab3de67346bddab16ca79da 118 SUPERFAMILY SSF52833 3 117 8.41E-37 T 14-10-2018 IPR036249 Thioredoxin-like superfamily GYO_3583 3709eb858ab3de67346bddab16ca79da 118 Gene3D G3DSA:3.40.30.10 1 116 8.0E-48 T 14-10-2018 GYO_1563 93e97eadeed0d2ceb6ab054a41e43d20 278 SUPERFAMILY SSF46785 53 106 4.33E-6 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily GYO_4480 0264541bbb26d81f1f7271c2c579de3f 129 SUPERFAMILY SSF54427 2 125 1.45E-31 T 14-10-2018 IPR032710 NTF2-like domain superfamily GYO_4480 0264541bbb26d81f1f7271c2c579de3f 129 Pfam PF14534 Domain of unknown function (DUF4440) 5 115 1.6E-6 T 14-10-2018 IPR027843 Domain of unknown function DUF4440 GYO_4480 0264541bbb26d81f1f7271c2c579de3f 129 Gene3D G3DSA:3.10.450.50 1 129 1.7E-43 T 14-10-2018 GYO_3912 6e5974dc54771554ecd2da6c016132ac 447 Pfam PF14667 Polysaccharide biosynthesis C-terminal domain 291 431 7.0E-8 T 14-10-2018 IPR029303 Polysaccharide biosynthesis protein, C-terminal domain GYO_3912 6e5974dc54771554ecd2da6c016132ac 447 Pfam PF13440 Polysaccharide biosynthesis protein 4 290 7.0E-70 T 14-10-2018 GYO_0506 bae0ba1458ef5b7a158e6adfa2eeff71 477 Pfam PF03606 C4-dicarboxylate anaerobic carrier 19 470 1.4E-81 T 14-10-2018 IPR018385 C4-dicarboxylate anaerobic carrier-like GO:0016021 GYO_3838 08ff1508130fff1a4d35d2753a64abc8 396 Pfam PF01979 Amidohydrolase family 54 386 2.1E-42 T 14-10-2018 IPR006680 Amidohydrolase-related GO:0016787 GYO_3838 08ff1508130fff1a4d35d2753a64abc8 396 SUPERFAMILY SSF51338 4 391 7.31E-18 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 GYO_3838 08ff1508130fff1a4d35d2753a64abc8 396 SUPERFAMILY SSF51556 58 358 2.42E-96 T 14-10-2018 IPR032466 Metal-dependent hydrolase GYO_3838 08ff1508130fff1a4d35d2753a64abc8 396 PIRSF PIRSF038994 3 391 4.2E-145 T 14-10-2018 IPR003764 N-acetylglucosamine-6-phosphate deacetylase GO:0006044|GO:0008448 KEGG: 00052+3.5.1.25|KEGG: 00520+3.5.1.25|MetaCyc: PWY-6906|MetaCyc: PWY-7077|MetaCyc: PWY-7395|Reactome: R-HSA-446210 GYO_3838 08ff1508130fff1a4d35d2753a64abc8 396 Gene3D G3DSA:3.20.20.140 58 358 3.8E-154 T 14-10-2018 GYO_3838 08ff1508130fff1a4d35d2753a64abc8 396 Gene3D G3DSA:2.30.40.10 12 386 3.8E-154 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 GYO_3838 08ff1508130fff1a4d35d2753a64abc8 396 TIGRFAM TIGR00221 nagA: N-acetylglucosamine-6-phosphate deacetylase 1 385 3.4E-174 T 14-10-2018 IPR003764 N-acetylglucosamine-6-phosphate deacetylase GO:0006044|GO:0008448 KEGG: 00052+3.5.1.25|KEGG: 00520+3.5.1.25|MetaCyc: PWY-6906|MetaCyc: PWY-7077|MetaCyc: PWY-7395|Reactome: R-HSA-446210 GYO_2898 2b4d743a98ad45f4b9fc42c49555dcfb 246 Gene3D G3DSA:3.40.109.10 1 246 1.4E-67 T 14-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 GYO_2898 2b4d743a98ad45f4b9fc42c49555dcfb 246 SUPERFAMILY SSF55469 1 245 6.28E-64 T 14-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 GYO_2898 2b4d743a98ad45f4b9fc42c49555dcfb 246 Pfam PF00881 Nitroreductase family 11 159 7.1E-15 T 14-10-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 GYO_2898 2b4d743a98ad45f4b9fc42c49555dcfb 246 PIRSF PIRSF005426 1 246 3.9E-79 T 14-10-2018 IPR016446 Flavin oxidoreductase Frp family GO:0016491|GO:0055114 GYO_4298 4181eeca5c8192f090f4565096e74125 162 SUPERFAMILY SSF54518 2 152 2.88E-36 T 14-10-2018 IPR025659 Tubby-like, C-terminal GYO_4298 4181eeca5c8192f090f4565096e74125 162 Gene3D G3DSA:3.20.90.20 1 157 9.5E-14 T 14-10-2018 IPR038595 LURP-one-related superfamily GYO_4298 4181eeca5c8192f090f4565096e74125 162 Pfam PF04525 LURP-one-related 5 148 3.3E-30 T 14-10-2018 IPR007612 LURP-one-related GYO_2139 dec399a1ff02f50aaacf191b1f9a31e3 520 Pfam PF03323 Bacillus/Clostridium GerA spore germination protein 40 509 1.1E-182 T 14-10-2018 IPR004995 Bacillus/Clostridium Ger spore germination protein GO:0009847|GO:0016021 GYO_2139 dec399a1ff02f50aaacf191b1f9a31e3 520 PIRSF PIRSF005690 25 520 1.5E-197 T 14-10-2018 IPR004995 Bacillus/Clostridium Ger spore germination protein GO:0009847|GO:0016021 GYO_2267 636ab4f5fc75c0b8cb8a91ad8934e72a 209 Pfam PF01965 DJ-1/PfpI family 4 176 1.8E-37 T 14-10-2018 IPR002818 DJ-1/PfpI Reactome: R-HSA-3899300 GYO_2267 636ab4f5fc75c0b8cb8a91ad8934e72a 209 SUPERFAMILY SSF52317 4 178 2.75E-31 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like GYO_2267 636ab4f5fc75c0b8cb8a91ad8934e72a 209 Gene3D G3DSA:3.40.50.880 1 209 5.3E-55 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like GYO_3616 f06ac5ce56ec2e07cd54a56b0b746c55 241 PIRSF PIRSF031509 1 241 9.1E-67 T 14-10-2018 IPR016975 Cell wall-active antibiotic response protein GO:0016021 GYO_3616 f06ac5ce56ec2e07cd54a56b0b746c55 241 Pfam PF09922 Cell wall-active antibiotics response 4TMS YvqF 126 238 1.0E-34 T 14-10-2018 IPR024425 Cell wall-active antibiotics response 4TMS YvqF GYO_4212 ba59a25c9d59d0ccd200654f982fc0ae 513 Pfam PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain 41 234 3.6E-32 T 14-10-2018 IPR005849 Galactose-1-phosphate uridyl transferase, N-terminal GO:0006012|GO:0008108 KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527|Reactome: R-HSA-5609978|Reactome: R-HSA-70370 GYO_4212 ba59a25c9d59d0ccd200654f982fc0ae 513 Hamap MF_00571 Galactose-1-phosphate uridylyltransferase [galT]. 1 513 257.295 T 14-10-2018 IPR000766 Galactose-1-phosphate uridyl transferase, class II GO:0005737|GO:0006012|GO:0008108 KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527 GYO_4212 ba59a25c9d59d0ccd200654f982fc0ae 513 PIRSF PIRSF006005 1 506 1.3E-223 T 14-10-2018 IPR000766 Galactose-1-phosphate uridyl transferase, class II GO:0005737|GO:0006012|GO:0008108 KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527 GYO_4212 ba59a25c9d59d0ccd200654f982fc0ae 513 TIGRFAM TIGR01239 galT_2: galactose-1-phosphate uridylyltransferase 6 503 1.3E-260 T 14-10-2018 IPR000766 Galactose-1-phosphate uridyl transferase, class II GO:0005737|GO:0006012|GO:0008108 KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527 GYO_4212 ba59a25c9d59d0ccd200654f982fc0ae 513 ProSitePatterns PS01163 Galactose-1-phosphate uridyl transferase family 2 signature. 262 279 - T 14-10-2018 IPR023425 Galactose-1-phosphate uridyl transferase, class II, conserved site GO:0008108 KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527 GYO_4212 ba59a25c9d59d0ccd200654f982fc0ae 513 Pfam PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain 250 450 1.4E-51 T 14-10-2018 IPR005850 Galactose-1-phosphate uridyl transferase, C-terminal GO:0006012|GO:0008108 KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527|Reactome: R-HSA-5609978|Reactome: R-HSA-70370 GYO_3980 011299e8aac4b70e21aa4fc4ee0366be 633 Pfam PF04740 LXG domain of WXG superfamily 3 201 8.0E-50 T 14-10-2018 IPR006829 LXG domain GYO_3980 011299e8aac4b70e21aa4fc4ee0366be 633 Pfam PF14449 Pre-toxin TG 255 320 2.9E-20 T 14-10-2018 IPR027797 Pre-toxin TG domain GYO_3980 011299e8aac4b70e21aa4fc4ee0366be 633 Pfam PF15637 HNH/Endo VII superfamily nuclease toxin with a HHH motif 507 605 3.9E-15 T 14-10-2018 IPR028915 Tox-HNH-HHH domain GYO_2433 69ab9732ce5bb104bac39a113c8b08a8 501 SUPERFAMILY SSF55486 6 495 3.05E-114 T 14-10-2018 GYO_2433 69ab9732ce5bb104bac39a113c8b08a8 501 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 148 168 2.3E-93 T 14-10-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 GYO_2433 69ab9732ce5bb104bac39a113c8b08a8 501 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 245 264 2.3E-93 T 14-10-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 GYO_2433 69ab9732ce5bb104bac39a113c8b08a8 501 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 265 284 2.3E-93 T 14-10-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 GYO_2433 69ab9732ce5bb104bac39a113c8b08a8 501 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 292 308 2.3E-93 T 14-10-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 GYO_2433 69ab9732ce5bb104bac39a113c8b08a8 501 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 333 352 2.3E-93 T 14-10-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 GYO_2433 69ab9732ce5bb104bac39a113c8b08a8 501 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 402 423 2.3E-93 T 14-10-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 GYO_2433 69ab9732ce5bb104bac39a113c8b08a8 501 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 228 244 2.3E-93 T 14-10-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 GYO_2433 69ab9732ce5bb104bac39a113c8b08a8 501 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 379 396 2.3E-93 T 14-10-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 GYO_2433 69ab9732ce5bb104bac39a113c8b08a8 501 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 447 465 2.3E-93 T 14-10-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 GYO_2433 69ab9732ce5bb104bac39a113c8b08a8 501 PIRSF PIRSF006615 2 501 2.5E-207 T 14-10-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 GYO_2433 69ab9732ce5bb104bac39a113c8b08a8 501 Gene3D G3DSA:1.10.1370.30 1 500 1.1E-218 T 14-10-2018 GYO_2433 69ab9732ce5bb104bac39a113c8b08a8 501 Pfam PF02074 Carboxypeptidase Taq (M32) metallopeptidase 1 495 0.0 T 14-10-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 GYO_3140 4c1f58bc9edc4ada00de7127eeccf9b5 231 Hamap MF_01142 Antiholin-like protein LrgB [lrgB]. 1 230 32.222 T 14-10-2018 IPR024891 Antiholin-like protein LrgB GYO_3140 4c1f58bc9edc4ada00de7127eeccf9b5 231 Pfam PF04172 LrgB-like family 14 227 5.0E-69 T 14-10-2018 IPR007300 CidB/LrgB family GYO_1755 845c78196fb7e4601eaf40795f5ad30d 81 Pfam PF03698 Uncharacterised protein family (UPF0180) 3 79 3.3E-30 T 14-10-2018 IPR005370 Uncharacterised protein family UPF0180 GYO_1755 845c78196fb7e4601eaf40795f5ad30d 81 ProDom PD059670 UPF0180 YKUS BA1413/GBAA1413/BAS1304 YKUS-LIKE BT9727_1277 BCE1513 GK1051 BH2667 ABC2430 BCE33L1278 4 48 2.0E-18 T 14-10-2018 IPR005370 Uncharacterised protein family UPF0180 GYO_1755 845c78196fb7e4601eaf40795f5ad30d 81 Hamap MF_00506 UPF0180 protein . 2 80 28.453 T 14-10-2018 IPR005370 Uncharacterised protein family UPF0180 GYO_0636 7a8a4cecb28f4c9d09c4b84c33c365e8 198 Pfam PF13649 Methyltransferase domain 47 139 2.9E-17 T 14-10-2018 GYO_0636 7a8a4cecb28f4c9d09c4b84c33c365e8 198 SUPERFAMILY SSF53335 29 180 1.47E-26 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase GYO_0636 7a8a4cecb28f4c9d09c4b84c33c365e8 198 Gene3D G3DSA:3.40.50.150 19 197 7.6E-28 T 14-10-2018 GYO_2650 88d6a950a081ab70024059ee7db1d5c6 330 SUPERFAMILY SSF52518 8 330 1.07E-103 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold GYO_2650 88d6a950a081ab70024059ee7db1d5c6 330 Gene3D G3DSA:3.40.50.970 1 330 6.4E-121 T 14-10-2018 GYO_2650 88d6a950a081ab70024059ee7db1d5c6 330 Pfam PF00676 Dehydrogenase E1 component 20 320 1.0E-113 T 14-10-2018 IPR001017 Dehydrogenase, E1 component GO:0016624 Reactome: R-HSA-389661 GYO_2376 3e69cbc439cb51d20010a0eb9558f978 92 Pfam PF14122 YokU-like protein, putative antitoxin 4 89 2.2E-43 T 14-10-2018 IPR022451 Conserved hypothetical protein CHP03829, YokU GYO_2376 3e69cbc439cb51d20010a0eb9558f978 92 TIGRFAM TIGR03831 YgiT_finger: YgiT-type zinc finger domain 4 50 9.6E-13 T 14-10-2018 IPR022453 Zinc finger, MqsA-type GYO_2376 3e69cbc439cb51d20010a0eb9558f978 92 TIGRFAM TIGR03829 YokU_near_AblA: uncharacterized protein, YokU family 4 91 5.3E-44 T 14-10-2018 IPR022451 Conserved hypothetical protein CHP03829, YokU GYO_4005 dd32d20cbceafd3f6b5ced26695e8b6e 270 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 11 31 - T 14-10-2018 IPR019776 Flagellar basal body rod protein, conserved site GYO_4005 dd32d20cbceafd3f6b5ced26695e8b6e 270 SUPERFAMILY SSF117143 115 228 1.2E-7 T 14-10-2018 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like GYO_4005 dd32d20cbceafd3f6b5ced26695e8b6e 270 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 190 265 5.7E-17 T 14-10-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain GYO_4005 dd32d20cbceafd3f6b5ced26695e8b6e 270 Pfam PF00460 Flagella basal body rod protein 5 35 1.3E-13 T 14-10-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 GYO_3948 2e8d8d07fac8c5f83a337ef4fd144fe0 149 PRINTS PR01759 Capsule biosynthesis protein CapC signature 20 37 3.0E-51 T 14-10-2018 IPR008338 Capsule biosynthesis protein CapC GO:0016020|GO:0045227 GYO_3948 2e8d8d07fac8c5f83a337ef4fd144fe0 149 PRINTS PR01759 Capsule biosynthesis protein CapC signature 66 80 3.0E-51 T 14-10-2018 IPR008338 Capsule biosynthesis protein CapC GO:0016020|GO:0045227 GYO_3948 2e8d8d07fac8c5f83a337ef4fd144fe0 149 PRINTS PR01759 Capsule biosynthesis protein CapC signature 2 17 3.0E-51 T 14-10-2018 IPR008338 Capsule biosynthesis protein CapC GO:0016020|GO:0045227 GYO_3948 2e8d8d07fac8c5f83a337ef4fd144fe0 149 PRINTS PR01759 Capsule biosynthesis protein CapC signature 118 132 3.0E-51 T 14-10-2018 IPR008338 Capsule biosynthesis protein CapC GO:0016020|GO:0045227 GYO_3948 2e8d8d07fac8c5f83a337ef4fd144fe0 149 PRINTS PR01759 Capsule biosynthesis protein CapC signature 88 101 3.0E-51 T 14-10-2018 IPR008338 Capsule biosynthesis protein CapC GO:0016020|GO:0045227 GYO_3948 2e8d8d07fac8c5f83a337ef4fd144fe0 149 TIGRFAM TIGR04011 poly_gGlu_PgsC: poly-gamma-glutamate biosynthesis protein PgsC 10 139 6.7E-45 T 14-10-2018 IPR008338 Capsule biosynthesis protein CapC GO:0016020|GO:0045227 GYO_3948 2e8d8d07fac8c5f83a337ef4fd144fe0 149 Pfam PF14102 Capsule biosynthesis CapC 12 128 3.4E-39 T 14-10-2018 IPR008338 Capsule biosynthesis protein CapC GO:0016020|GO:0045227 GYO_4157 cdcf5e23ed190c62ccecea12d4936b75 472 SUPERFAMILY SSF56059 120 375 1.36E-32 T 14-10-2018 GYO_4157 cdcf5e23ed190c62ccecea12d4936b75 472 Gene3D G3DSA:3.90.1170.60 373 468 5.3E-64 T 14-10-2018 GYO_4157 cdcf5e23ed190c62ccecea12d4936b75 472 Pfam PF13535 ATP-grasp domain 172 333 2.1E-15 T 14-10-2018 GYO_4157 cdcf5e23ed190c62ccecea12d4936b75 472 Gene3D G3DSA:3.30.1490.20 137 228 1.0E-22 T 14-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 GYO_4157 cdcf5e23ed190c62ccecea12d4936b75 472 Gene3D G3DSA:3.40.50.20 1 136 1.1E-80 T 14-10-2018 GYO_4157 cdcf5e23ed190c62ccecea12d4936b75 472 Gene3D G3DSA:3.30.470.20 229 372 6.6E-58 T 14-10-2018 GYO_0393 8d4188a96979bd29f7b0d1fd7302825a 285 Gene3D G3DSA:2.60.120.380 51 155 4.4E-5 T 14-10-2018 GYO_0525 a1de8f5a147cfe884d257f850513144f 251 Gene3D G3DSA:3.20.20.530 1 251 1.9E-84 T 14-10-2018 GYO_0525 a1de8f5a147cfe884d257f850513144f 251 SUPERFAMILY SSF51730 2 246 3.65E-70 T 14-10-2018 IPR029041 FAD-linked oxidoreductase-like GYO_0525 a1de8f5a147cfe884d257f850513144f 251 Pfam PF01619 Proline dehydrogenase 3 240 3.3E-35 T 14-10-2018 IPR002872 Proline dehydrogenase domain KEGG: 00330+1.5.5.2|MetaCyc: PWY-5737|MetaCyc: PWY-6922|Reactome: R-HSA-70688 GYO_2399 a03b084ad354195e2e8535d6affa6d5c 83 Pfam PF10751 Protein of unknown function (DUF2535) 1 83 2.6E-40 T 14-10-2018 IPR019687 Protein of unknown function DUF2535 GYO_1015 864ba884f62ace2bf20214354026cb31 333 Gene3D G3DSA:1.10.3470.10 1 329 2.2E-101 T 14-10-2018 IPR037294 ABC transporter, BtuC-like GYO_1015 864ba884f62ace2bf20214354026cb31 333 Pfam PF01032 FecCD transport family 21 326 2.7E-97 T 14-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 GYO_1015 864ba884f62ace2bf20214354026cb31 333 SUPERFAMILY SSF81345 6 326 1.03E-87 T 14-10-2018 IPR037294 ABC transporter, BtuC-like GYO_1245 35062128d86ea3c12b3317049501ca89 299 Gene3D G3DSA:3.40.50.720 1 283 4.4E-48 T 14-10-2018 GYO_1245 35062128d86ea3c12b3317049501ca89 299 Pfam PF01370 NAD dependent epimerase/dehydratase family 3 217 1.9E-27 T 14-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 GYO_1245 35062128d86ea3c12b3317049501ca89 299 SUPERFAMILY SSF51735 1 280 7.06E-53 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily GYO_2905 3b4d3e3f36167ebb248cef632f8ba1c6 152 Pfam PF00583 Acetyltransferase (GNAT) family 37 134 1.5E-20 T 14-10-2018 IPR000182 GNAT domain GYO_2905 3b4d3e3f36167ebb248cef632f8ba1c6 152 Gene3D G3DSA:3.40.630.30 44 151 1.6E-28 T 14-10-2018 GYO_2905 3b4d3e3f36167ebb248cef632f8ba1c6 152 Gene3D G3DSA:1.10.287.900 1 41 2.0E-5 T 14-10-2018 IPR027455 Spermine/spermidine acetyltransferase, N-terminal KEGG: 00330+2.3.1.57|MetaCyc: PWY-0|MetaCyc: PWY-6117|MetaCyc: PWY-6922 GYO_2905 3b4d3e3f36167ebb248cef632f8ba1c6 152 SUPERFAMILY SSF55729 1 144 7.93E-31 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase GYO_3480 273dc2cdc3411d88612bc3fa4f7d4c76 79 PIRSF PIRSF037793 1 79 4.3E-33 T 14-10-2018 IPR014921 EsaB GYO_3480 273dc2cdc3411d88612bc3fa4f7d4c76 79 SUPERFAMILY SSF54236 5 78 8.79E-6 T 14-10-2018 IPR029071 Ubiquitin-like domain superfamily GYO_3480 273dc2cdc3411d88612bc3fa4f7d4c76 79 Gene3D G3DSA:3.10.20.90 1 79 2.9E-43 T 14-10-2018 GYO_3480 273dc2cdc3411d88612bc3fa4f7d4c76 79 Pfam PF08817 WXG100 protein secretion system (Wss), protein YukD 3 78 2.6E-13 T 14-10-2018 IPR024962 YukD-like GYO_4442 3fb65e47e023b670c7ed7da1eaf43758 467 ProSitePatterns PS00218 Amino acid permeases signature. 44 75 - T 14-10-2018 IPR004840 Amino acid permease, conserved site GO:0006865|GO:0016021|GO:0055085 GYO_4442 3fb65e47e023b670c7ed7da1eaf43758 467 PIRSF PIRSF006060 1 466 1.4E-87 T 14-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 GYO_4442 3fb65e47e023b670c7ed7da1eaf43758 467 Pfam PF00324 Amino acid permease 19 460 2.1E-124 T 14-10-2018 IPR004841 Amino acid permease/ SLC12A domain GO:0016020|GO:0055085 GYO_4442 3fb65e47e023b670c7ed7da1eaf43758 467 Gene3D G3DSA:1.20.1740.10 10 466 3.7E-76 T 14-10-2018 GYO_3474 7f3d487b517993d1776bb8bbd9f54011 176 SMART SM00471 19 148 8.4E-8 T 14-10-2018 IPR003607 HD/PDEase domain GYO_3474 7f3d487b517993d1776bb8bbd9f54011 176 TIGRFAM TIGR00277 HDIG: HDIG domain 22 91 2.1E-7 T 14-10-2018 IPR006675 HDIG domain GYO_3474 7f3d487b517993d1776bb8bbd9f54011 176 Pfam PF01966 HD domain 25 137 1.6E-14 T 14-10-2018 IPR006674 HD domain GYO_3474 7f3d487b517993d1776bb8bbd9f54011 176 SUPERFAMILY SSF109604 16 137 3.14E-21 T 14-10-2018 GYO_3474 7f3d487b517993d1776bb8bbd9f54011 176 Gene3D G3DSA:1.10.3210.10 7 169 3.1E-17 T 14-10-2018 GYO_2072 58f536152f1055abea38e47c42089f0f 249 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 98 118 - T 14-10-2018 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824 GYO_2072 58f536152f1055abea38e47c42089f0f 249 SUPERFAMILY SSF52096 8 244 1.35E-44 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily GYO_2072 58f536152f1055abea38e47c42089f0f 249 Pfam PF00378 Enoyl-CoA hydratase/isomerase 11 246 1.1E-76 T 14-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 GYO_2072 58f536152f1055abea38e47c42089f0f 249 Gene3D G3DSA:3.90.226.10 1 224 5.3E-71 T 14-10-2018 GYO_3289 bf1edbfdaff9044c5beeba33e09e917b 253 Pfam PF00005 ABC transporter 23 171 2.0E-30 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 GYO_3289 bf1edbfdaff9044c5beeba33e09e917b 253 SUPERFAMILY SSF52540 3 224 4.17E-66 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase GYO_3289 bf1edbfdaff9044c5beeba33e09e917b 253 SMART SM00382 32 219 3.9E-9 T 14-10-2018 IPR003593 AAA+ ATPase domain GYO_3289 bf1edbfdaff9044c5beeba33e09e917b 253 Gene3D G3DSA:3.40.50.300 1 244 2.7E-64 T 14-10-2018 GYO_1467 bd6cda90b10c01fcc6ceaee18992c780 299 Gene3D G3DSA:3.30.2350.10 83 299 1.1E-66 T 14-10-2018 GYO_1467 bd6cda90b10c01fcc6ceaee18992c780 299 TIGRFAM TIGR00005 rluA_subfam: pseudouridine synthase, RluA family 41 295 1.1E-75 T 14-10-2018 IPR006225 Pseudouridine synthase, RluC/RluD GO:0001522|GO:0003723|GO:0009451|GO:0009982 GYO_1467 bd6cda90b10c01fcc6ceaee18992c780 299 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 133 147 - T 14-10-2018 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 GYO_1467 bd6cda90b10c01fcc6ceaee18992c780 299 Pfam PF00849 RNA pseudouridylate synthase 90 240 7.3E-25 T 14-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 GYO_1467 bd6cda90b10c01fcc6ceaee18992c780 299 SUPERFAMILY SSF55120 76 295 5.44E-70 T 14-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 GYO_3004 aefa249eae6ed1abe98ff269479c4676 165 SUPERFAMILY SSF116726 84 157 1.07E-12 T 14-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 GYO_3004 aefa249eae6ed1abe98ff269479c4676 165 Pfam PF02080 TrkA-C domain 95 158 2.4E-11 T 14-10-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 GYO_3004 aefa249eae6ed1abe98ff269479c4676 165 Gene3D G3DSA:3.30.70.1450 85 162 3.0E-15 T 14-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 GYO_3004 aefa249eae6ed1abe98ff269479c4676 165 PIRSF PIRSF005028 1 162 1.4E-55 T 14-10-2018 IPR026278 Potassium/proton antiporter subunit KhtT GYO_2697 fa76ae5fdc7c9a17c4bbe0b6eab502ec 229 TIGRFAM TIGR02830 spore_III_AG: stage III sporulation protein AG 29 224 7.5E-75 T 14-10-2018 IPR014195 Sporulation stage III, protein AG GYO_4080 c20543ca60808a54c6f514154d478358 318 Pfam PF03547 Membrane transport protein 165 314 1.4E-24 T 14-10-2018 IPR004776 Membrane transport protein GO:0016021|GO:0055085 GYO_4080 c20543ca60808a54c6f514154d478358 318 Pfam PF03547 Membrane transport protein 7 163 3.4E-29 T 14-10-2018 IPR004776 Membrane transport protein GO:0016021|GO:0055085 GYO_0028 0741397f58522dccbd9ec037a142f049 87 TIGRFAM TIGR02862 spore_BofA: pro-sigmaK processing inhibitor BofA 5 86 5.7E-30 T 14-10-2018 IPR010001 SigmaK-factor processing regulatory BofA GYO_0028 0741397f58522dccbd9ec037a142f049 87 Pfam PF07441 SigmaK-factor processing regulatory protein BofA 12 85 7.8E-19 T 14-10-2018 IPR010001 SigmaK-factor processing regulatory BofA GYO_2719 60aaefe67ce9ab0b6a48a83fe91eee1b 264 ProDom PD123329 YQHG BH2818 1 260 3.0E-150 T 14-10-2018 IPR024562 Uncharacterised protein family YqhG GYO_2719 60aaefe67ce9ab0b6a48a83fe91eee1b 264 Pfam PF11079 Bacterial protein YqhG of unknown function 2 258 4.0E-125 T 14-10-2018 IPR024562 Uncharacterised protein family YqhG GYO_2881 53c9e8eb59824f53540485cbfb2f0faa 253 SUPERFAMILY SSF56281 2 253 3.38E-21 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like GYO_2881 53c9e8eb59824f53540485cbfb2f0faa 253 Gene3D G3DSA:3.60.15.10 1 252 1.5E-67 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like GYO_2881 53c9e8eb59824f53540485cbfb2f0faa 253 Pfam PF12706 Beta-lactamase superfamily domain 20 216 2.4E-11 T 14-10-2018 IPR001279 Metallo-beta-lactamase GYO_2881 53c9e8eb59824f53540485cbfb2f0faa 253 SMART SM00849 6 215 0.0034 T 14-10-2018 IPR001279 Metallo-beta-lactamase GYO_0766 c37f9e7b02ee637b8b59d963df9daecd 377 Gene3D G3DSA:2.120.10.30 85 323 2.2E-17 T 14-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like GYO_0766 c37f9e7b02ee637b8b59d963df9daecd 377 SUPERFAMILY SSF82171 112 354 1.29E-20 T 14-10-2018 GYO_3707 a88fbb522e13cd16a97948e295e8c452 185 SUPERFAMILY SSF46785 9 160 1.36E-21 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily GYO_3707 a88fbb522e13cd16a97948e295e8c452 185 PIRSF PIRSF006707 2 184 5.2E-49 T 14-10-2018 IPR026282 DNA-binding protein, MJ1563 type GYO_3707 a88fbb522e13cd16a97948e295e8c452 185 Pfam PF12802 MarR family 28 79 1.8E-6 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 GYO_3707 a88fbb522e13cd16a97948e295e8c452 185 Gene3D G3DSA:1.10.10.10 7 91 4.0E-20 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily GYO_2622 d22dc2d4ddb6f3dfa23fcca3fb65b95f 319 Gene3D G3DSA:3.60.15.10 2 258 7.7E-49 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like GYO_2622 d22dc2d4ddb6f3dfa23fcca3fb65b95f 319 SUPERFAMILY SSF56281 5 314 1.28E-44 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like GYO_2622 d22dc2d4ddb6f3dfa23fcca3fb65b95f 319 SMART SM00849 19 231 3.0E-21 T 14-10-2018 IPR001279 Metallo-beta-lactamase GYO_2622 d22dc2d4ddb6f3dfa23fcca3fb65b95f 319 Pfam PF00753 Metallo-beta-lactamase superfamily 21 231 1.1E-18 T 14-10-2018 IPR001279 Metallo-beta-lactamase GYO_3636 be102b21d1d422c68946a0b6050d69c7 229 SMART SM00382 30 217 3.5E-16 T 14-10-2018 IPR003593 AAA+ ATPase domain GYO_3636 be102b21d1d422c68946a0b6050d69c7 229 ProSitePatterns PS00211 ABC transporters family signature. 142 156 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 GYO_3636 be102b21d1d422c68946a0b6050d69c7 229 Pfam PF00005 ABC transporter 21 169 9.1E-36 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 GYO_3636 be102b21d1d422c68946a0b6050d69c7 229 Gene3D G3DSA:3.40.50.300 1 226 1.7E-73 T 14-10-2018 GYO_3636 be102b21d1d422c68946a0b6050d69c7 229 SUPERFAMILY SSF52540 1 221 1.98E-75 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase GYO_3451 a55d82eb1b86dae64069d1f45d00c74f 143 Pfam PF04039 Domain related to MnhB subunit of Na+/H+ antiporter 10 134 6.3E-36 T 14-10-2018 IPR007182 Na+/H+ antiporter MnhB subunit-related protein GYO_3451 a55d82eb1b86dae64069d1f45d00c74f 143 TIGRFAM TIGR00943 2a6301s02: monovalent cation:proton antiporter 29 135 1.6E-47 T 14-10-2018 IPR005281 Monovalent cation:proton antiporter, subunit B GO:0006812|GO:0008324|GO:0016021 GYO_3630 63fc8d5f5d1eeb27cec85413b7f2daf6 78 Pfam PF12645 Helix-turn-helix domain 10 53 2.7E-5 T 14-10-2018 IPR024760 Helix-turn-helix, conjugative transposon-like GYO_2478 ef64fdf161f3b1660c69c19a5d4a33a9 290 Gene3D G3DSA:3.30.70.120 193 269 2.0E-26 T 14-10-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal GYO_2478 ef64fdf161f3b1660c69c19a5d4a33a9 290 Pfam PF10035 Uncharacterized protein conserved in bacteria (DUF2179) 222 276 2.4E-23 T 14-10-2018 IPR019264 Domain of unknown function DUF2179 GYO_2478 ef64fdf161f3b1660c69c19a5d4a33a9 290 Pfam PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 9 216 2.9E-65 T 14-10-2018 IPR003740 Uncharacterised membrane protein YitT GYO_2478 ef64fdf161f3b1660c69c19a5d4a33a9 290 PIRSF PIRSF006483 1 284 1.0E-101 T 14-10-2018 IPR003740 Uncharacterised membrane protein YitT GYO_2737 f1f519f8142268e48c174c6305c8a98e 317 SUPERFAMILY SSF144083 234 295 4.18E-17 T 14-10-2018 GYO_2737 f1f519f8142268e48c174c6305c8a98e 317 SUPERFAMILY SSF143865 62 191 3.92E-7 T 14-10-2018 GYO_2737 f1f519f8142268e48c174c6305c8a98e 317 Pfam PF01544 CorA-like Mg2+ transporter protein 48 294 3.0E-32 T 14-10-2018 IPR002523 Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB GO:0016020|GO:0030001|GO:0046873|GO:0055085 GYO_2737 f1f519f8142268e48c174c6305c8a98e 317 Gene3D G3DSA:1.20.58.340 222 298 6.9E-23 T 14-10-2018 GYO_2589 23f3b8fc90646869a3771a4060e1b676 214 TIGRFAM TIGR02831 spo_II_M: stage II sporulation protein M 9 207 1.8E-82 T 14-10-2018 IPR014196 Stage II sporulation protein M GYO_2589 23f3b8fc90646869a3771a4060e1b676 214 Pfam PF01944 Stage II sporulation protein M 26 203 2.2E-27 T 14-10-2018 IPR002798 Stage II sporulation protein M-like GYO_2589 23f3b8fc90646869a3771a4060e1b676 214 PIRSF PIRSF038973 1 214 1.0E-71 T 14-10-2018 IPR014196 Stage II sporulation protein M GYO_4035 0021e5408d47bd895582bee9ab2175b9 300 Pfam PF02653 Branched-chain amino acid transport system / permease component 8 284 9.5E-48 T 14-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 GYO_4035 0021e5408d47bd895582bee9ab2175b9 300 TIGRFAM TIGR03409 urea_trans_UrtB: urea ABC transporter, permease protein UrtB 6 297 8.3E-120 T 14-10-2018 IPR017779 ABC transporter, urea permease protein UrtB, bacterial-type GYO_0961 620ea4fef8483efdba0353632346efa9 761 Gene3D G3DSA:1.10.10.60 653 704 6.1E-15 T 14-10-2018 GYO_0961 620ea4fef8483efdba0353632346efa9 761 SUPERFAMILY SSF46689 708 756 2.08E-10 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 GYO_0961 620ea4fef8483efdba0353632346efa9 761 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 709 750 - T 14-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 GYO_0961 620ea4fef8483efdba0353632346efa9 761 SUPERFAMILY SSF46689 657 706 2.41E-8 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 GYO_0961 620ea4fef8483efdba0353632346efa9 761 Pfam PF12833 Helix-turn-helix domain 679 755 4.7E-19 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 GYO_0961 620ea4fef8483efdba0353632346efa9 761 Gene3D G3DSA:1.10.10.60 705 760 1.0E-17 T 14-10-2018 GYO_0961 620ea4fef8483efdba0353632346efa9 761 SMART SM00342 672 754 6.4E-32 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 GYO_0961 620ea4fef8483efdba0353632346efa9 761 Gene3D G3DSA:3.30.450.20 170 289 9.9E-8 T 14-10-2018 GYO_4051 4ab51c9fa5dbb0e0c00db059324792d6 76 TIGRFAM TIGR02327 int_mem_ywzB: conserved hypothetical integral membrane protein 10 76 1.2E-26 T 14-10-2018 IPR009526 Protein of unknown function DUF1146 GYO_4051 4ab51c9fa5dbb0e0c00db059324792d6 76 Pfam PF06612 Protein of unknown function (DUF1146) 16 63 1.5E-22 T 14-10-2018 IPR009526 Protein of unknown function DUF1146 GYO_0670 ae6fae312c784e1a4a2c44524788be8f 255 Pfam PF12730 ABC-2 family transporter protein 4 182 7.8E-21 T 14-10-2018 IPR032688 ABC-2 family transporter protein GO:0055085 GYO_1513 1ab00277fc3aab6c2d39e27a806cde8b 320 Pfam PF01040 UbiA prenyltransferase family 42 298 1.3E-56 T 14-10-2018 IPR000537 UbiA prenyltransferase family GO:0016021|GO:0016765 GYO_1513 1ab00277fc3aab6c2d39e27a806cde8b 320 Hamap MF_00154 Protoheme IX farnesyltransferase [cyoE]. 23 314 18.294 T 14-10-2018 IPR006369 Protohaem IX farnesyltransferase GO:0008495|GO:0016021|GO:0048034 Reactome: R-HSA-189451 GYO_1513 1ab00277fc3aab6c2d39e27a806cde8b 320 ProSitePatterns PS00943 UbiA prenyltransferase family signature. 85 107 - T 14-10-2018 IPR030470 UbiA prenyltransferase conserved site GYO_1513 1ab00277fc3aab6c2d39e27a806cde8b 320 Gene3D G3DSA:1.10.357.140 35 194 2.6E-16 T 14-10-2018 GYO_1513 1ab00277fc3aab6c2d39e27a806cde8b 320 TIGRFAM TIGR01473 cyoE_ctaB: protoheme IX farnesyltransferase 26 313 2.3E-98 T 14-10-2018 IPR006369 Protohaem IX farnesyltransferase GO:0008495|GO:0016021|GO:0048034 Reactome: R-HSA-189451 GYO_2402 235ee638c88e81fbcf77df843db59408 213 Pfam PF03006 Haemolysin-III related 2 198 2.0E-39 T 14-10-2018 IPR004254 AdipoR/Haemolysin-III-related GO:0016021 GYO_2402 235ee638c88e81fbcf77df843db59408 213 TIGRFAM TIGR01065 hlyIII: channel protein, hemolysin III family 6 206 3.7E-73 T 14-10-2018 IPR005744 Hly-III GO:0016021|GO:0019835 GYO_1980 0744547c8f81fa3d92c4bcd878d640d3 204 Pfam PF03448 MgtE intracellular N domain 141 199 7.0E-7 T 14-10-2018 IPR006668 Magnesium transporter, MgtE intracellular domain GYO_1980 0744547c8f81fa3d92c4bcd878d640d3 204 Gene3D G3DSA:1.25.60.10 136 204 1.1E-5 T 14-10-2018 IPR038076 MgtE, N-terminal domain superfamily GYO_1980 0744547c8f81fa3d92c4bcd878d640d3 204 SUPERFAMILY SSF158791 142 194 9.42E-7 T 14-10-2018 GYO_2782 133c9f7596463d13319935ba16ff9f8c 216 PIRSF PIRSF018637 1 216 2.2E-84 T 14-10-2018 IPR006901 tRNA methyltransferase TrmK GO:0016429 GYO_2782 133c9f7596463d13319935ba16ff9f8c 216 Pfam PF04816 tRNA (adenine(22)-N(1))-methyltransferase 1 211 1.3E-79 T 14-10-2018 IPR006901 tRNA methyltransferase TrmK GO:0016429 GYO_2782 133c9f7596463d13319935ba16ff9f8c 216 Gene3D G3DSA:3.40.50.150 1 142 3.0E-46 T 14-10-2018 GYO_3052 4533bf4025169bc72ddfe0f474dec2a4 873 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 42 53 - T 14-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 GYO_3052 4533bf4025169bc72ddfe0f474dec2a4 873 Pfam PF08264 Anticodon-binding domain of tRNA 601 749 2.7E-43 T 14-10-2018 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0004812|GO:0006418 GYO_3052 4533bf4025169bc72ddfe0f474dec2a4 873 PRINTS PR00986 Valyl-tRNA synthetase signature 229 246 3.4E-40 T 14-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 GYO_3052 4533bf4025169bc72ddfe0f474dec2a4 873 PRINTS PR00986 Valyl-tRNA synthetase signature 470 488 3.4E-40 T 14-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 GYO_3052 4533bf4025169bc72ddfe0f474dec2a4 873 PRINTS PR00986 Valyl-tRNA synthetase signature 35 46 3.4E-40 T 14-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 GYO_3052 4533bf4025169bc72ddfe0f474dec2a4 873 PRINTS PR00986 Valyl-tRNA synthetase signature 438 459 3.4E-40 T 14-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 GYO_3052 4533bf4025169bc72ddfe0f474dec2a4 873 PRINTS PR00986 Valyl-tRNA synthetase signature 344 357 3.4E-40 T 14-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 GYO_3052 4533bf4025169bc72ddfe0f474dec2a4 873 Gene3D G3DSA:1.10.730.10 1 734 0.0 T 14-10-2018 GYO_3052 4533bf4025169bc72ddfe0f474dec2a4 873 SUPERFAMILY SSF47323 570 822 3.92E-76 T 14-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 GYO_3052 4533bf4025169bc72ddfe0f474dec2a4 873 Pfam PF10458 Valyl tRNA synthetase tRNA binding arm 807 872 4.9E-23 T 14-10-2018 IPR019499 Valyl-tRNA synthetase, tRNA-binding arm GO:0000166|GO:0004832|GO:0005524|GO:0005737|GO:0006438 KEGG: 00970+6.1.1.9 GYO_3052 4533bf4025169bc72ddfe0f474dec2a4 873 Gene3D G3DSA:3.40.50.620 21 519 0.0 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold GYO_3052 4533bf4025169bc72ddfe0f474dec2a4 873 Gene3D G3DSA:3.90.740.10 174 340 0.0 T 14-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 GYO_3052 4533bf4025169bc72ddfe0f474dec2a4 873 SUPERFAMILY SSF52374 1 568 4.55E-148 T 14-10-2018 GYO_3052 4533bf4025169bc72ddfe0f474dec2a4 873 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 14 558 5.0E-232 T 14-10-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 GYO_3052 4533bf4025169bc72ddfe0f474dec2a4 873 Gene3D G3DSA:1.10.287.380 800 872 4.3E-24 T 14-10-2018 IPR037118 Valyl-tRNA synthetase, tRNA-binding arm superfamily GO:0000166|GO:0004832|GO:0005524|GO:0005737|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: R-HSA-379716 GYO_3052 4533bf4025169bc72ddfe0f474dec2a4 873 TIGRFAM TIGR00422 valS: valine--tRNA ligase 1 854 0.0 T 14-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 GYO_3052 4533bf4025169bc72ddfe0f474dec2a4 873 SUPERFAMILY SSF46589 807 871 1.36E-16 T 14-10-2018 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm GO:0000166 GYO_3052 4533bf4025169bc72ddfe0f474dec2a4 873 Hamap MF_02004 Valine--tRNA ligase [valS]. 1 872 16.323 T 14-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 GYO_3052 4533bf4025169bc72ddfe0f474dec2a4 873 SUPERFAMILY SSF50677 190 340 1.57E-65 T 14-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 GYO_0764 ee94e609200c310233c292d30c3c6509 304 TIGRFAM TIGR00350 lytR_cpsA_psr: cell envelope-related function transcriptional attenuator common domain 78 221 6.8E-47 T 14-10-2018 IPR004474 Cell envelope-related transcriptional attenuator domain GYO_0764 ee94e609200c310233c292d30c3c6509 304 Pfam PF03816 Cell envelope-related transcriptional attenuator domain 79 220 6.8E-47 T 14-10-2018 IPR004474 Cell envelope-related transcriptional attenuator domain GYO_0764 ee94e609200c310233c292d30c3c6509 304 Gene3D G3DSA:1.10.260.150 46 304 6.9E-86 T 14-10-2018 GYO_2192 24bd753dab2dc4e6305c1089e5a54955 73 Pfam PF00364 Biotin-requiring enzyme 9 68 1.3E-19 T 14-10-2018 IPR000089 Biotin/lipoyl attachment GYO_2192 24bd753dab2dc4e6305c1089e5a54955 73 SUPERFAMILY SSF51230 3 68 3.14E-21 T 14-10-2018 IPR011053 Single hybrid motif GYO_2192 24bd753dab2dc4e6305c1089e5a54955 73 Gene3D G3DSA:2.40.50.100 2 73 8.9E-28 T 14-10-2018 GYO_2342 42e91d5c445348cee4c1bf11d20fcb3a 196 Pfam PF00080 Copper/zinc superoxide dismutase (SODC) 52 188 7.5E-38 T 14-10-2018 IPR001424 Superoxide dismutase, copper/zinc binding domain GO:0006801|GO:0046872 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 GYO_2342 42e91d5c445348cee4c1bf11d20fcb3a 196 Gene3D G3DSA:2.60.40.200 40 196 9.8E-61 T 14-10-2018 IPR036423 Superoxide dismutase-like, copper/zinc binding domain superfamily GO:0006801|GO:0046872 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 GYO_2342 42e91d5c445348cee4c1bf11d20fcb3a 196 SUPERFAMILY SSF49329 44 188 2.88E-37 T 14-10-2018 IPR036423 Superoxide dismutase-like, copper/zinc binding domain superfamily GO:0006801|GO:0046872 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 GYO_2672 18f25e55cee18679cd49d1d7d8e8f9d9 224 Gene3D G3DSA:3.30.2010.10 125 216 2.7E-17 T 14-10-2018 GYO_2672 18f25e55cee18679cd49d1d7d8e8f9d9 224 Pfam PF01863 Protein of unknown function DUF45 13 216 1.4E-59 T 14-10-2018 IPR002725 Protein of unknown function DUF45 GYO_3288 86f631123efd820e14ac7a99acdea412 646 Pfam PF02687 FtsX-like permease family 85 173 2.3E-7 T 14-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 GYO_3288 86f631123efd820e14ac7a99acdea412 646 PIRSF PIRSF018968 1 646 4.6E-154 T 14-10-2018 IPR027022 ABC transporter permease protein, BceB-type GO:0055085 GYO_3226 2a88035265af4e62edfda12ed52057cd 140 Gene3D G3DSA:1.10.287.950 20 136 8.1E-6 T 14-10-2018 GYO_3226 2a88035265af4e62edfda12ed52057cd 140 Pfam PF06103 Bacterial protein of unknown function (DUF948) 8 94 8.5E-28 T 14-10-2018 IPR009293 Uncharacterised protein family UPF0478 GYO_3226 2a88035265af4e62edfda12ed52057cd 140 SUPERFAMILY SSF58104 26 130 1.96E-5 T 14-10-2018 GYO_2187 c6d94afb6b9eed8dbcda1d5e28f7a73d 198 Pfam PF09335 SNARE associated Golgi protein 29 155 3.6E-27 T 14-10-2018 IPR032816 SNARE associated Golgi protein GYO_1028 2fdf87029c8159e3ead9fc67e47f2118 264 Pfam PF00753 Metallo-beta-lactamase superfamily 28 241 2.0E-39 T 14-10-2018 IPR001279 Metallo-beta-lactamase GYO_1028 2fdf87029c8159e3ead9fc67e47f2118 264 SMART SM00849 30 241 3.4E-34 T 14-10-2018 IPR001279 Metallo-beta-lactamase GYO_1028 2fdf87029c8159e3ead9fc67e47f2118 264 Gene3D G3DSA:3.60.15.10 9 260 6.3E-42 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like GYO_1028 2fdf87029c8159e3ead9fc67e47f2118 264 SUPERFAMILY SSF56281 17 250 3.01E-46 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like GYO_2424 42c53c78ecdaaa491a6a481188ca70b7 42 TIGRFAM TIGR03093 SASP_sspL: small, acid-soluble spore protein L 6 41 1.4E-23 T 14-10-2018 IPR017526 Small acid-soluble spore protein, SspL GYO_2390 94d278706a6702563609bb3f3af23087 341 SUPERFAMILY SSF51735 15 276 1.58E-57 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily GYO_2390 94d278706a6702563609bb3f3af23087 341 Gene3D G3DSA:3.40.50.720 15 303 3.3E-117 T 14-10-2018 GYO_2390 94d278706a6702563609bb3f3af23087 341 Pfam PF02719 Polysaccharide biosynthesis protein 18 296 1.7E-98 T 14-10-2018 IPR003869 Polysaccharide biosynthesis protein, CapD-like domain GYO_2390 94d278706a6702563609bb3f3af23087 341 Gene3D G3DSA:3.90.25.30 178 277 3.3E-117 T 14-10-2018 GYO_2869 58242da8d3425c52549a1a9f21f51bc0 131 Gene3D G3DSA:3.40.1260.10 1 131 8.0E-39 T 14-10-2018 IPR027396 DsrEFH-like GYO_2869 58242da8d3425c52549a1a9f21f51bc0 131 SUPERFAMILY SSF75169 5 131 4.54E-23 T 14-10-2018 IPR027396 DsrEFH-like GYO_2869 58242da8d3425c52549a1a9f21f51bc0 131 Pfam PF13686 DsrE/DsrF/DrsH-like family 62 129 4.7E-22 T 14-10-2018 IPR032836 DsrE2-like family GYO_2869 58242da8d3425c52549a1a9f21f51bc0 131 Pfam PF13686 DsrE/DsrF/DrsH-like family 3 60 5.8E-12 T 14-10-2018 IPR032836 DsrE2-like family GYO_1477 b393d937398c97d117e82850db2d60bd 258 SUPERFAMILY SSF51735 6 255 1.3E-67 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily GYO_1477 b393d937398c97d117e82850db2d60bd 258 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 14 254 1.5E-87 T 14-10-2018 GYO_1477 b393d937398c97d117e82850db2d60bd 258 Gene3D G3DSA:3.40.50.720 1 258 4.9E-63 T 14-10-2018 GYO_1477 b393d937398c97d117e82850db2d60bd 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 161 180 1.7E-12 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR GYO_1477 b393d937398c97d117e82850db2d60bd 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 217 237 1.7E-12 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR GYO_1477 b393d937398c97d117e82850db2d60bd 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 135 151 1.7E-12 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR GYO_1477 b393d937398c97d117e82850db2d60bd 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 182 199 1.7E-12 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR GYO_1477 b393d937398c97d117e82850db2d60bd 258 PIRSF PIRSF000094 2 258 2.7E-103 T 14-10-2018 IPR014358 Enoyl-[acyl-carrier-protein] reductase (NADH) GO:0004318|GO:0006633|GO:0055114 KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 GYO_2545 b7c183f99981a722b257e8f345e57a4e 391 TIGRFAM TIGR03144 cytochr_II_ccsB: cytochrome c-type biogenesis protein CcsB 48 391 1.0E-74 T 14-10-2018 IPR017562 Cytochrome c-type biogenesis protein CcsA GO:0017004 GYO_2545 b7c183f99981a722b257e8f345e57a4e 391 Pfam PF01578 Cytochrome C assembly protein 83 388 1.6E-32 T 14-10-2018 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 GYO_1669 3d4848b54668e2adfccc556ffe82d710 325 TIGRFAM TIGR03716 R_switched_YkoY: integral membrane protein, YkoY family 73 304 2.2E-92 T 14-10-2018 IPR022493 Integral membrane YkoY GYO_1669 3d4848b54668e2adfccc556ffe82d710 325 SUPERFAMILY SSF103473 72 304 5.75E-5 T 14-10-2018 IPR036259 MFS transporter superfamily GYO_1669 3d4848b54668e2adfccc556ffe82d710 325 Pfam PF03741 Integral membrane protein TerC family 76 264 2.8E-51 T 14-10-2018 IPR005496 Integral membrane protein TerC GO:0016021 GYO_1212 30c15a0dbdc91b6f5a8083472ff4e510 513 SUPERFAMILY SSF55729 16 144 3.38E-18 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase GYO_1212 30c15a0dbdc91b6f5a8083472ff4e510 513 Pfam PF00795 Carbon-nitrogen hydrolase 231 489 1.6E-29 T 14-10-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807 GYO_1212 30c15a0dbdc91b6f5a8083472ff4e510 513 Gene3D G3DSA:3.40.630.30 7 226 2.0E-63 T 14-10-2018 GYO_1212 30c15a0dbdc91b6f5a8083472ff4e510 513 SUPERFAMILY SSF56317 229 496 1.44E-58 T 14-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily GYO_1212 30c15a0dbdc91b6f5a8083472ff4e510 513 Gene3D G3DSA:3.60.110.10 228 513 1.1E-57 T 14-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily GYO_1212 30c15a0dbdc91b6f5a8083472ff4e510 513 Pfam PF00583 Acetyltransferase (GNAT) family 25 147 4.8E-13 T 14-10-2018 IPR000182 GNAT domain GYO_1212 30c15a0dbdc91b6f5a8083472ff4e510 513 ProSitePatterns PS01227 Uncharacterized protein family UPF0012 signature. 375 395 - T 14-10-2018 IPR001110 Uncharacterised protein family UPF0012, conserved site GYO_2936 429c7de827d91029f7c6d7ecaca8c5b5 169 SUPERFAMILY SSF52317 1 168 1.78E-48 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like GYO_2936 429c7de827d91029f7c6d7ecaca8c5b5 169 TIGRFAM TIGR01382 PfpI: intracellular protease, PfpI family 4 169 1.9E-57 T 14-10-2018 IPR006286 Deglycase PfpI GYO_2936 429c7de827d91029f7c6d7ecaca8c5b5 169 Gene3D G3DSA:3.40.50.880 1 168 8.8E-51 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like GYO_2936 429c7de827d91029f7c6d7ecaca8c5b5 169 Pfam PF01965 DJ-1/PfpI family 3 165 9.8E-54 T 14-10-2018 IPR002818 DJ-1/PfpI Reactome: R-HSA-3899300 GYO_1103 cd6469f5accbb7bdf6e5b430b5006573 199 Gene3D G3DSA:3.40.630.30 2 194 6.6E-49 T 14-10-2018 GYO_1103 cd6469f5accbb7bdf6e5b430b5006573 199 Pfam PF13302 Acetyltransferase (GNAT) domain 14 151 4.0E-21 T 14-10-2018 IPR000182 GNAT domain GYO_1103 cd6469f5accbb7bdf6e5b430b5006573 199 SUPERFAMILY SSF55729 6 177 1.06E-39 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase GYO_4436 dd3bef66f2c6ce98b400aa9df52ad302 387 SUPERFAMILY SSF50998 214 365 2.94E-5 T 14-10-2018 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily GYO_4436 dd3bef66f2c6ce98b400aa9df52ad302 387 Gene3D G3DSA:2.130.10.10 161 382 3.8E-6 T 14-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 GYO_3044 9df5ad2beab61273540a76bed7d5ae71 290 Gene3D G3DSA:2.40.10.350 186 264 5.5E-25 T 14-10-2018 GYO_3044 9df5ad2beab61273540a76bed7d5ae71 290 Pfam PF04085 rod shape-determining protein MreC 119 276 1.3E-43 T 14-10-2018 IPR007221 Rod shape-determining protein MreC GO:0008360 GYO_3044 9df5ad2beab61273540a76bed7d5ae71 290 PIRSF PIRSF038471 1 290 5.0E-63 T 14-10-2018 IPR007221 Rod shape-determining protein MreC GO:0008360 GYO_3044 9df5ad2beab61273540a76bed7d5ae71 290 Gene3D G3DSA:2.40.10.340 109 185 5.1E-22 T 14-10-2018 GYO_3044 9df5ad2beab61273540a76bed7d5ae71 290 TIGRFAM TIGR00219 mreC: rod shape-determining protein MreC 1 288 6.0E-121 T 14-10-2018 IPR007221 Rod shape-determining protein MreC GO:0008360 GYO_2086 e044ed320bde3763d5b9c04138d21d67 150 Gene3D G3DSA:3.30.300.20 7 145 1.7E-31 T 14-10-2018 IPR015946 K homology domain-like, alpha/beta GYO_2086 e044ed320bde3763d5b9c04138d21d67 150 Pfam PF02566 OsmC-like protein 39 141 4.1E-17 T 14-10-2018 IPR003718 OsmC/Ohr family GYO_2086 e044ed320bde3763d5b9c04138d21d67 150 SUPERFAMILY SSF82784 3 141 1.31E-31 T 14-10-2018 IPR036102 OsmC/Ohr superfamily GYO_2086 e044ed320bde3763d5b9c04138d21d67 150 TIGRFAM TIGR03563 perox_SACOL1771: peroxiredoxin, SACOL1771 subfamily 4 141 3.3E-72 T 14-10-2018 IPR019905 Peroxiredoxin OsmC-like protein, Firmicutes GYO_4361 fe2d0a7ca04d83f6ee23fc8a87dd97bb 328 Pfam PF02275 Linear amide C-N hydrolases, choloylglycine hydrolase family 2 315 2.0E-128 T 14-10-2018 IPR029132 Choloylglycine hydrolase/NAAA C-terminal GYO_4361 fe2d0a7ca04d83f6ee23fc8a87dd97bb 328 Gene3D G3DSA:3.60.60.10 2 328 8.4E-133 T 14-10-2018 GYO_4361 fe2d0a7ca04d83f6ee23fc8a87dd97bb 328 SUPERFAMILY SSF56235 2 327 8.49E-108 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal GYO_2964 4660911a5383624a85fc6a03a0f5c1e1 76 Pfam PF14143 YrhC-like protein 4 75 3.1E-29 T 14-10-2018 IPR025418 YrhC-like protein GYO_2964 4660911a5383624a85fc6a03a0f5c1e1 76 ProDom PD057834 YRHC TRANSMEMBRANE MEMBRANE 1 76 3.0E-37 T 14-10-2018 IPR025418 YrhC-like protein GYO_2451 9ff73ecec81d31eea360a81561c9f76b 122 Pfam PF14179 YppG-like protein 6 121 2.9E-31 T 14-10-2018 IPR025555 YppG-like protein GYO_1853 e11c13d3fef98dc1b51e10a1ce9f6d5c 172 Pfam PF02620 Uncharacterized ACR, COG1399 56 165 2.6E-26 T 14-10-2018 IPR003772 Large ribosomal RNA subunit accumulation protein YceD GYO_0425 e98609b6268f21be89130581e4966fca 294 Pfam PF12697 Alpha/beta hydrolase family 57 284 1.1E-13 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 GYO_0425 e98609b6268f21be89130581e4966fca 294 SUPERFAMILY SSF53474 20 291 7.3E-44 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold GYO_0425 e98609b6268f21be89130581e4966fca 294 Gene3D G3DSA:3.40.50.1820 1 292 6.8E-83 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold GYO_0094 e3483fe91a7c855f620fe6efd9e84f63 72 SMART SM00530 9 64 2.3E-15 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 GYO_0094 e3483fe91a7c855f620fe6efd9e84f63 72 Gene3D G3DSA:1.10.260.40 3 72 3.8E-17 T 14-10-2018 GYO_0094 e3483fe91a7c855f620fe6efd9e84f63 72 SUPERFAMILY SSF47413 4 70 2.23E-17 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 GYO_0094 e3483fe91a7c855f620fe6efd9e84f63 72 Pfam PF01381 Helix-turn-helix 10 64 2.0E-14 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 GYO_0610 d70c14615fad6ea4998be08b104e5017 261 Gene3D G3DSA:3.40.50.720 1 261 3.9E-87 T 14-10-2018 GYO_0610 d70c14615fad6ea4998be08b104e5017 261 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 145 173 - T 14-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 GYO_0610 d70c14615fad6ea4998be08b104e5017 261 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 14 251 2.8E-68 T 14-10-2018 GYO_0610 d70c14615fad6ea4998be08b104e5017 261 SUPERFAMILY SSF51735 6 252 9.41E-83 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily GYO_0610 d70c14615fad6ea4998be08b104e5017 261 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 158 177 6.2E-13 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR GYO_0610 d70c14615fad6ea4998be08b104e5017 261 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 84 95 6.2E-13 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR GYO_0610 d70c14615fad6ea4998be08b104e5017 261 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 138 146 6.2E-13 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR GYO_0610 d70c14615fad6ea4998be08b104e5017 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 84 95 3.2E-42 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR GYO_0610 d70c14615fad6ea4998be08b104e5017 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 9 26 3.2E-42 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR GYO_0610 d70c14615fad6ea4998be08b104e5017 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 132 148 3.2E-42 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR GYO_0610 d70c14615fad6ea4998be08b104e5017 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 214 234 3.2E-42 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR GYO_0610 d70c14615fad6ea4998be08b104e5017 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 158 177 3.2E-42 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR GYO_0610 d70c14615fad6ea4998be08b104e5017 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 179 196 3.2E-42 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR GYO_0814 ccdb7975f91f17c4dda0f970b76cfbdd 458 Pfam PF00324 Amino acid permease 23 454 1.4E-110 T 14-10-2018 IPR004841 Amino acid permease/ SLC12A domain GO:0016020|GO:0055085 GYO_0814 ccdb7975f91f17c4dda0f970b76cfbdd 458 ProSitePatterns PS00218 Amino acid permeases signature. 48 78 - T 14-10-2018 IPR004840 Amino acid permease, conserved site GO:0006865|GO:0016021|GO:0055085 GYO_0814 ccdb7975f91f17c4dda0f970b76cfbdd 458 PIRSF PIRSF006060 2 457 3.7E-69 T 14-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 GYO_0814 ccdb7975f91f17c4dda0f970b76cfbdd 458 Gene3D G3DSA:1.20.1740.10 14 458 1.5E-63 T 14-10-2018 GYO_3705 7750e93e3a50dbcd2a7a513c9fec22ad 217 SUPERFAMILY SSF161098 13 197 1.96E-39 T 14-10-2018 IPR035906 MetI-like superfamily GYO_3705 7750e93e3a50dbcd2a7a513c9fec22ad 217 Gene3D G3DSA:1.10.3720.10 14 208 2.1E-33 T 14-10-2018 IPR035906 MetI-like superfamily GYO_3705 7750e93e3a50dbcd2a7a513c9fec22ad 217 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 30 198 1.9E-22 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 GYO_3763 e1660291a148359eff5b6904ce44858c 358 Pfam PF04230 Polysaccharide pyruvyl transferase 52 293 4.8E-29 T 14-10-2018 IPR007345 Polysaccharide pyruvyl transferase GYO_1541 ef39e9d30b5f8eeb43ccd208b9ae3d9a 337 Gene3D G3DSA:3.30.1370.60 70 308 5.6E-120 T 14-10-2018 GYO_1541 ef39e9d30b5f8eeb43ccd208b9ae3d9a 337 Pfam PF02615 Malate/L-lactate dehydrogenase 7 334 5.3E-122 T 14-10-2018 IPR003767 Malate/L-lactate dehydrogenase-like GO:0016491|GO:0055114 GYO_1541 ef39e9d30b5f8eeb43ccd208b9ae3d9a 337 SUPERFAMILY SSF89733 4 336 8.37E-115 T 14-10-2018 IPR036111 Malate/L-sulfolactate/L-lactate dehydrogenase-like superfamily GO:0016491|GO:0055114 GYO_1541 ef39e9d30b5f8eeb43ccd208b9ae3d9a 337 Gene3D G3DSA:1.10.1530.10 12 327 5.6E-120 T 14-10-2018 GYO_3319 ab926440e4eea64308b9c685a39eabb6 146 Pfam PF13115 YtkA-like 32 112 6.6E-16 T 14-10-2018 IPR032693 YtkA-like domain GYO_0056 7fed75441fca15d1a41f7e65ee43eed1 151 Pfam PF00156 Phosphoribosyl transferase domain 2 123 4.4E-18 T 14-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 GYO_0056 7fed75441fca15d1a41f7e65ee43eed1 151 SUPERFAMILY SSF53271 2 130 7.81E-32 T 14-10-2018 IPR029057 Phosphoribosyltransferase-like GYO_0056 7fed75441fca15d1a41f7e65ee43eed1 151 Gene3D G3DSA:3.40.50.2020 1 140 1.0E-47 T 14-10-2018 GYO_4557 1f6be86ee28cab0a3c332c8d1cbd78ec 48 Pfam PF08179 Small acid-soluble spore protein P family 1 43 6.2E-24 T 14-10-2018 IPR012614 Small acid-soluble spore protein, SspP GO:0030435 GYO_4557 1f6be86ee28cab0a3c332c8d1cbd78ec 48 Hamap MF_00666 Small, acid-soluble spore protein P [sspP]. 1 48 19.702 T 14-10-2018 IPR012614 Small acid-soluble spore protein, SspP GO:0030435 GYO_4245 2304ba7e9e6eace03281eeaca7947134 455 Pfam PF04389 Peptidase family M28 229 425 1.0E-43 T 14-10-2018 IPR007484 Peptidase M28 GYO_4245 2304ba7e9e6eace03281eeaca7947134 455 Gene3D G3DSA:3.50.30.30 99 220 1.5E-104 T 14-10-2018 GYO_4245 2304ba7e9e6eace03281eeaca7947134 455 Gene3D G3DSA:3.40.630.10 61 420 1.5E-104 T 14-10-2018 GYO_4245 2304ba7e9e6eace03281eeaca7947134 455 Pfam PF02225 PA domain 126 209 1.7E-19 T 14-10-2018 IPR003137 PA domain GYO_4245 2304ba7e9e6eace03281eeaca7947134 455 SUPERFAMILY SSF53187 42 431 8.85E-57 T 14-10-2018 GYO_4245 2304ba7e9e6eace03281eeaca7947134 455 SUPERFAMILY SSF52025 121 209 4.97E-20 T 14-10-2018 GYO_2966 bfdc9760d35b3e7137a0f11b6da30c65 307 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 8 292 9.1E-66 T 14-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme GYO_2966 bfdc9760d35b3e7137a0f11b6da30c65 307 SUPERFAMILY SSF53686 2 302 1.7E-90 T 14-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme GYO_2966 bfdc9760d35b3e7137a0f11b6da30c65 307 Gene3D G3DSA:3.40.50.1100 9 299 5.2E-112 T 14-10-2018 GYO_2966 bfdc9760d35b3e7137a0f11b6da30c65 307 ProSitePatterns PS00901 Cysteine synthase/cystathionine beta-synthase P-phosphate attachment site. 33 51 - T 14-10-2018 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site GO:0006535 GYO_2966 bfdc9760d35b3e7137a0f11b6da30c65 307 Gene3D G3DSA:3.40.50.1100 45 146 5.2E-112 T 14-10-2018 GYO_3322 6c35d0bf21ffcb795f5349e2b49cab32 187 SMART SM00947 26 182 5.1E-34 T 14-10-2018 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 GYO_3322 6c35d0bf21ffcb795f5349e2b49cab32 187 Gene3D G3DSA:3.40.1050.10 2 183 5.9E-47 T 14-10-2018 IPR036874 Carbonic anhydrase superfamily GO:0004089|GO:0008270 GYO_3322 6c35d0bf21ffcb795f5349e2b49cab32 187 SUPERFAMILY SSF53056 1 181 9.55E-43 T 14-10-2018 IPR036874 Carbonic anhydrase superfamily GO:0004089|GO:0008270 GYO_3322 6c35d0bf21ffcb795f5349e2b49cab32 187 Pfam PF00484 Carbonic anhydrase 34 178 9.5E-18 T 14-10-2018 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 GYO_4318 ce23f6e0502ffa0c218e310368862d95 226 ProDom PD114929 PRECURSOR YXIP SIGNAL 12 219 3.0E-95 T 14-10-2018 GYO_4227 3cb378fca85dfb36406942b172a110c9 128 Pfam PF03788 LrgA family 22 110 1.1E-27 T 14-10-2018 IPR005538 LrgA/CidA family GO:0016021 GYO_4227 3cb378fca85dfb36406942b172a110c9 128 Hamap MF_01143 Holin-like protein CidA [cidA]. 1 119 24.325 T 14-10-2018 IPR023760 Holin-like protein CidA GO:0016021 GYO_4023 83b1690d60c3f5901874722153bab380 144 ProDom PD087515 YWNF MEMBRANE SYNTHASE BH1886 BETA-KETOACYL TRANSMEMBRANE 1 142 1.0E-50 T 14-10-2018 IPR020205 Uncharacterised protein family, YwnF, transmembrane GYO_4023 83b1690d60c3f5901874722153bab380 144 Pfam PF17370 Family of unknown function (DUF5392) 6 142 4.5E-56 T 14-10-2018 IPR020205 Uncharacterised protein family, YwnF, transmembrane GYO_4177 bf584d5f71d588b5a87173e5cdc1eaf9 474 Gene3D G3DSA:3.40.50.2000 284 442 8.9E-8 T 14-10-2018 GYO_4177 bf584d5f71d588b5a87173e5cdc1eaf9 474 Gene3D G3DSA:3.40.50.2000 254 283 8.9E-8 T 14-10-2018 GYO_4177 bf584d5f71d588b5a87173e5cdc1eaf9 474 SUPERFAMILY SSF53756 181 442 8.64E-22 T 14-10-2018 GYO_4177 bf584d5f71d588b5a87173e5cdc1eaf9 474 Pfam PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase 258 395 4.2E-9 T 14-10-2018 IPR007554 CDP-glycerol glycerophosphotransferase GO:0016020|GO:0047355 GYO_3930 474eba073ecf680cdf4ce9aa1f5a04d9 257 Pfam PF03808 Glycosyl transferase WecB/TagA/CpsF family 60 224 4.0E-59 T 14-10-2018 IPR004629 Glycosyl transferase WecB/TagA/CpsF GO:0009058 GYO_3930 474eba073ecf680cdf4ce9aa1f5a04d9 257 TIGRFAM TIGR00696 wecG_tagA_cpsF: glycosyltransferase, WecB/TagA/CpsF family 56 230 3.4E-71 T 14-10-2018 IPR004629 Glycosyl transferase WecB/TagA/CpsF GO:0009058 GYO_3930 474eba073ecf680cdf4ce9aa1f5a04d9 257 Hamap MF_02070 N-acetylglucosaminyldiphosphoundecaprenol N-acetyl-beta-D-mannosaminyltransferase. 2 239 59.345 T 14-10-2018 IPR034714 N-acetylglucosaminyldiphosphoundecaprenol N-acetyl-beta-D-mannosaminyltransferase GO:0047244 MetaCyc: PWY-7815|MetaCyc: PWY-7816|MetaCyc: PWY-7819 GYO_2069 18bdbd529cd1e986145cbb9958ba78bf 415 Gene3D G3DSA:3.40.47.10 263 409 1.4E-33 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 GYO_2069 18bdbd529cd1e986145cbb9958ba78bf 415 SUPERFAMILY SSF53901 217 408 5.0E-51 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 GYO_2069 18bdbd529cd1e986145cbb9958ba78bf 415 SMART SM00825 Beta-ketoacyl synthase 9 376 1.6E-9 T 14-10-2018 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain GYO_2069 18bdbd529cd1e986145cbb9958ba78bf 415 SUPERFAMILY SSF53901 8 253 2.76E-46 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 GYO_2069 18bdbd529cd1e986145cbb9958ba78bf 415 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 8 249 7.6E-41 T 14-10-2018 IPR014030 Beta-ketoacyl synthase, N-terminal GYO_2069 18bdbd529cd1e986145cbb9958ba78bf 415 Gene3D G3DSA:3.40.47.10 1 257 1.8E-52 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 GYO_2069 18bdbd529cd1e986145cbb9958ba78bf 415 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 257 366 3.0E-27 T 14-10-2018 IPR014031 Beta-ketoacyl synthase, C-terminal GYO_0937 7ff36e6afd84337047187d96c6eccb16 386 Pfam PF12102 Domain of unknown function (DUF3578) 18 198 3.6E-57 T 14-10-2018 IPR021961 Protein of unknown function DUF3578 GYO_0937 7ff36e6afd84337047187d96c6eccb16 386 Pfam PF01844 HNH endonuclease 301 343 2.8E-5 T 14-10-2018 IPR002711 HNH endonuclease GO:0003676|GO:0004519 GYO_0937 7ff36e6afd84337047187d96c6eccb16 386 Gene3D G3DSA:3.30.920.90 41 147 6.6E-8 T 14-10-2018 GYO_0953 04f06635e7dcd7408595e9b87fc565d2 180 SUPERFAMILY SSF55729 19 164 2.84E-20 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase GYO_0953 04f06635e7dcd7408595e9b87fc565d2 180 Pfam PF00583 Acetyltransferase (GNAT) family 57 160 3.9E-12 T 14-10-2018 IPR000182 GNAT domain GYO_0953 04f06635e7dcd7408595e9b87fc565d2 180 Gene3D G3DSA:3.40.630.30 13 180 1.9E-42 T 14-10-2018 GYO_0952 3b6994c3a9d4359768b0f2ea11d3db61 189 Pfam PF05067 Manganese containing catalase 1 184 1.4E-78 T 14-10-2018 IPR007760 Manganese catalase GYO_0952 3b6994c3a9d4359768b0f2ea11d3db61 189 Gene3D G3DSA:1.20.1260.10 1 184 2.6E-63 T 14-10-2018 IPR012347 Ferritin-like GYO_0952 3b6994c3a9d4359768b0f2ea11d3db61 189 SUPERFAMILY SSF47240 1 186 2.42E-68 T 14-10-2018 IPR009078 Ferritin-like superfamily GYO_1299 cab5d17c98b6dd62af6bb5e1a1c10ffa 408 Pfam PF05975 Bacterial ABC transporter protein EcsB 6 385 2.7E-121 T 14-10-2018 IPR010288 Bacterial ABC transporter EcsB GO:0016021 GYO_1299 cab5d17c98b6dd62af6bb5e1a1c10ffa 408 PIRSF PIRSF037259 2 407 6.0E-141 T 14-10-2018 IPR010288 Bacterial ABC transporter EcsB GO:0016021 GYO_2061 8692f361bf100b25bafc850ec2845d81 147 ProDom PD968187 BETA-DEFENSIN ANTIBIOTIC PRECURSOR ANTIMICROBIAL DEFENSIN BETA SIGNAL DEFENSIN BD-32 DEFB-32 2 143 2.0E-46 T 14-10-2018 GYO_2061 8692f361bf100b25bafc850ec2845d81 147 Pfam PF14184 Regulatory protein YrvL 25 147 3.2E-30 T 14-10-2018 IPR025912 Regulatory protein YrvL GYO_2640 2c90e91f8c0d6906249759426e8de75d 322 Pfam PF06081 Aromatic acid exporter family member 1 2 142 6.9E-54 T 14-10-2018 IPR010343 Aromatic acid exporter family member 1 GYO_2640 2c90e91f8c0d6906249759426e8de75d 322 Pfam PF11728 Putative aromatic acid exporter C-terminal domain 146 310 5.4E-58 T 14-10-2018 IPR021062 Putative aromatic acid exporter, C-terminal GYO_2640 2c90e91f8c0d6906249759426e8de75d 322 Gene3D G3DSA:1.20.120.940 141 314 1.1E-54 T 14-10-2018 IPR038323 Putative aromatic acid exporter, C-terminal domain superfamily GYO_4283 edceba19d8ceb43c77b79345d0f73cfa 121 Gene3D G3DSA:2.60.40.1080 23 120 2.9E-5 T 14-10-2018 GYO_4283 edceba19d8ceb43c77b79345d0f73cfa 121 SUPERFAMILY SSF49373 64 112 1.45E-6 T 14-10-2018 IPR008964 Invasin/intimin cell-adhesion fragments GYO_2635 ccc960252f3c9a9100e06a8eee10eef9 242 Gene3D G3DSA:2.40.400.10 10 218 2.8E-8 T 14-10-2018 IPR023375 Acetoacetate decarboxylase domain superfamily KEGG: 00072+4.1.1.4|KEGG: 00640+4.1.1.4|MetaCyc: PWY-5451|MetaCyc: PWY-6588|MetaCyc: PWY-6876|MetaCyc: PWY-7466 GYO_2635 ccc960252f3c9a9100e06a8eee10eef9 242 Pfam PF09844 Uncharacterized conserved protein (COG2071) 20 231 1.2E-76 T 14-10-2018 IPR018644 Protein of unknown function DUF2071 GYO_2635 ccc960252f3c9a9100e06a8eee10eef9 242 SUPERFAMILY SSF160104 13 220 3.92E-22 T 14-10-2018 IPR023375 Acetoacetate decarboxylase domain superfamily KEGG: 00072+4.1.1.4|KEGG: 00640+4.1.1.4|MetaCyc: PWY-5451|MetaCyc: PWY-6588|MetaCyc: PWY-6876|MetaCyc: PWY-7466 GYO_3918 41568bc28857cb4a310cc3bb98ac1a6e 221 TIGRFAM TIGR00350 lytR_cpsA_psr: cell envelope-related function transcriptional attenuator common domain 14 140 6.2E-50 T 14-10-2018 IPR004474 Cell envelope-related transcriptional attenuator domain GYO_3918 41568bc28857cb4a310cc3bb98ac1a6e 221 Gene3D G3DSA:1.10.260.150 13 221 1.6E-75 T 14-10-2018 GYO_3918 41568bc28857cb4a310cc3bb98ac1a6e 221 Pfam PF03816 Cell envelope-related transcriptional attenuator domain 14 139 1.3E-43 T 14-10-2018 IPR004474 Cell envelope-related transcriptional attenuator domain GYO_3947 6f58784de54d31b59abe83ff720c5d50 380 SUPERFAMILY SSF56300 62 317 4.43E-44 T 14-10-2018 GYO_3947 6f58784de54d31b59abe83ff720c5d50 380 Pfam PF09587 Bacterial capsule synthesis protein PGA_cap 62 300 9.0E-77 T 14-10-2018 IPR019079 Capsule synthesis protein, CapA GYO_3947 6f58784de54d31b59abe83ff720c5d50 380 SMART SM00854 60 300 4.4E-94 T 14-10-2018 IPR019079 Capsule synthesis protein, CapA GYO_3947 6f58784de54d31b59abe83ff720c5d50 380 Gene3D G3DSA:3.60.21.10 115 346 7.2E-12 T 14-10-2018 IPR029052 Metallo-dependent phosphatase-like GYO_0424 8aefb1ace07e21076adcd450a40563e3 132 Pfam PF10794 Protein of unknown function (DUF2606) 1 130 2.0E-68 T 14-10-2018 IPR019730 Protein of unknown function DUF2606 GYO_0424 8aefb1ace07e21076adcd450a40563e3 132 Gene3D G3DSA:2.60.40.10 29 125 1.3E-6 T 14-10-2018 IPR013783 Immunoglobulin-like fold GYO_3644 1220bca7070ff8401d256e5975dee2b3 469 Gene3D G3DSA:1.20.1740.10 2 469 2.4E-67 T 14-10-2018 GYO_3644 1220bca7070ff8401d256e5975dee2b3 469 Pfam PF13520 Amino acid permease 8 435 4.9E-59 T 14-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 GYO_3644 1220bca7070ff8401d256e5975dee2b3 469 PIRSF PIRSF006060 1 468 1.1E-61 T 14-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 GYO_2422 46328198ee208a7402fbe8603fdb61e5 229 TIGRFAM TIGR00697 TIGR00697: conserved hypothetical integral membrane protein 26 224 1.3E-76 T 14-10-2018 IPR003744 Queuosine precursor transporter GO:1990397 GYO_2422 46328198ee208a7402fbe8603fdb61e5 229 Hamap MF_02088 Probable queuosine precursor transporter. 26 227 17.06 T 14-10-2018 IPR003744 Queuosine precursor transporter GO:1990397 GYO_2422 46328198ee208a7402fbe8603fdb61e5 229 Pfam PF02592 Putative vitamin uptake transporter 57 217 5.4E-46 T 14-10-2018 IPR003744 Queuosine precursor transporter GO:1990397 GYO_0395 2a13c490207d23faf371c1ccf766e153 462 Pfam PF00324 Amino acid permease 14 439 9.0E-106 T 14-10-2018 IPR004841 Amino acid permease/ SLC12A domain GO:0016020|GO:0055085 GYO_0395 2a13c490207d23faf371c1ccf766e153 462 ProSitePatterns PS00218 Amino acid permeases signature. 39 69 - T 14-10-2018 IPR004840 Amino acid permease, conserved site GO:0006865|GO:0016021|GO:0055085 GYO_0395 2a13c490207d23faf371c1ccf766e153 462 Gene3D G3DSA:1.20.1740.10 4 459 2.0E-57 T 14-10-2018 GYO_0395 2a13c490207d23faf371c1ccf766e153 462 PIRSF PIRSF006060 1 462 2.1E-64 T 14-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 GYO_0023 cb8822e10b070eb27528aedd6af2d1a7 161 Pfam PF14437 MafB19-like deaminase 4 149 3.5E-41 T 14-10-2018 IPR028883 tRNA-specific adenosine deaminase GO:0002100|GO:0008251 Reactome: R-HSA-6782315 GYO_0023 cb8822e10b070eb27528aedd6af2d1a7 161 Hamap MF_00972 tRNA-specific adenosine deaminase [tadA]. 8 149 47.711 T 14-10-2018 IPR028883 tRNA-specific adenosine deaminase GO:0002100|GO:0008251 Reactome: R-HSA-6782315 GYO_0023 cb8822e10b070eb27528aedd6af2d1a7 161 Gene3D G3DSA:3.40.140.10 1 161 1.3E-61 T 14-10-2018 GYO_0023 cb8822e10b070eb27528aedd6af2d1a7 161 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 53 90 - T 14-10-2018 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 GYO_0023 cb8822e10b070eb27528aedd6af2d1a7 161 SUPERFAMILY SSF53927 2 153 8.36E-53 T 14-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 GYO_2026 91af6dbdace540f72f6a56dd12077577 319 SUPERFAMILY SSF88713 107 313 1.05E-58 T 14-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 GYO_2026 91af6dbdace540f72f6a56dd12077577 319 TIGRFAM TIGR02873 spore_ylxY: probable sporulation protein, polysaccharide deacetylase family 46 313 6.4E-151 T 14-10-2018 IPR014228 Sporulation protein, polysaccharide deacetylase, YlxY GYO_2026 91af6dbdace540f72f6a56dd12077577 319 Gene3D G3DSA:3.20.20.370 81 316 1.2E-59 T 14-10-2018 GYO_2026 91af6dbdace540f72f6a56dd12077577 319 ProSitePatterns PS00430 TonB-dependent receptor proteins signature 1. 1 44 - T 14-10-2018 IPR010916 TonB box, conserved site GYO_2026 91af6dbdace540f72f6a56dd12077577 319 Pfam PF01522 Polysaccharide deacetylase 126 243 2.0E-28 T 14-10-2018 IPR002509 NodB homology domain GO:0005975|GO:0016810 GYO_4364 9a758899cbe94fb8882448557cb3d556 141 Pfam PF11631 Protein of unknown function (DUF3255) 19 141 4.8E-76 T 14-10-2018 IPR021664 Protein of unknown function DUF3255 GYO_4364 9a758899cbe94fb8882448557cb3d556 141 SUPERFAMILY SSF50814 19 141 1.08E-66 T 14-10-2018 IPR012674 Calycin GYO_4364 9a758899cbe94fb8882448557cb3d556 141 Gene3D G3DSA:2.40.128.20 35 130 3.8E-58 T 14-10-2018 IPR012674 Calycin GYO_3021 0a24fb0741f437c3c1deff2535b5583c 484 Pfam PF01235 Sodium:alanine symporter family 49 459 1.3E-158 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 GYO_3021 0a24fb0741f437c3c1deff2535b5583c 484 TIGRFAM TIGR00835 agcS: amino acid carrier protein 13 447 1.4E-147 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 GYO_3021 0a24fb0741f437c3c1deff2535b5583c 484 PRINTS PR00175 Sodium/alanine symporter signature 353 375 1.3E-61 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 GYO_3021 0a24fb0741f437c3c1deff2535b5583c 484 PRINTS PR00175 Sodium/alanine symporter signature 176 194 1.3E-61 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 GYO_3021 0a24fb0741f437c3c1deff2535b5583c 484 PRINTS PR00175 Sodium/alanine symporter signature 295 313 1.3E-61 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 GYO_3021 0a24fb0741f437c3c1deff2535b5583c 484 PRINTS PR00175 Sodium/alanine symporter signature 86 108 1.3E-61 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 GYO_3021 0a24fb0741f437c3c1deff2535b5583c 484 PRINTS PR00175 Sodium/alanine symporter signature 416 436 1.3E-61 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 GYO_3021 0a24fb0741f437c3c1deff2535b5583c 484 PRINTS PR00175 Sodium/alanine symporter signature 204 223 1.3E-61 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 GYO_4301 ccc987b84b24a3daa1a1abe010d3b658 378 Gene3D G3DSA:3.20.20.210 14 378 1.7E-128 T 14-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 GYO_4301 ccc987b84b24a3daa1a1abe010d3b658 378 SUPERFAMILY SSF51726 22 378 2.49E-83 T 14-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 GYO_4301 ccc987b84b24a3daa1a1abe010d3b658 378 Pfam PF01717 Cobalamin-independent synthase, Catalytic domain 24 374 2.1E-15 T 14-10-2018 IPR002629 Cobalamin-independent methionine synthase MetE, C-terminal/archaeal GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 GYO_0950 21322cf0272d7835b2966c77db3a44c2 82 Pfam PF11007 Spore coat associated protein JA (CotJA) 33 68 5.3E-12 T 14-10-2018 IPR020256 Spore coat protein CotJA GYO_0950 21322cf0272d7835b2966c77db3a44c2 82 ProDom PD059966 COTJA SPORE PROTEIN-RELATED COAT-ASSOCIATED COTJAA JA 10 75 1.0E-33 T 14-10-2018 IPR020256 Spore coat protein CotJA GYO_1509 5b3fcd5fef8aaa45e35ab68bff47ef37 160 Pfam PF04073 Aminoacyl-tRNA editing domain 39 150 1.1E-24 T 14-10-2018 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 GYO_1509 5b3fcd5fef8aaa45e35ab68bff47ef37 160 PIRSF PIRSF006181 3 160 3.9E-62 T 14-10-2018 IPR004369 Prolyl-tRNA editing protein, YbaK/EbsC GYO_1509 5b3fcd5fef8aaa45e35ab68bff47ef37 160 TIGRFAM TIGR00011 YbaK_EbsC: Cys-tRNA(Pro) deacylase 8 160 1.7E-57 T 14-10-2018 IPR004369 Prolyl-tRNA editing protein, YbaK/EbsC GYO_1509 5b3fcd5fef8aaa45e35ab68bff47ef37 160 SUPERFAMILY SSF55826 8 159 4.71E-38 T 14-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 GYO_1509 5b3fcd5fef8aaa45e35ab68bff47ef37 160 Gene3D G3DSA:3.90.960.10 1 160 4.8E-50 T 14-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 GYO_3719 94514f0b95e5fcd77d4ee5fa47aa84ba 340 Pfam PF04198 Putative sugar-binding domain 91 337 1.5E-75 T 14-10-2018 IPR007324 Sugar-binding domain, putative GO:0030246 GYO_3719 94514f0b95e5fcd77d4ee5fa47aa84ba 340 SUPERFAMILY SSF46785 19 81 4.97E-13 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily GYO_3719 94514f0b95e5fcd77d4ee5fa47aa84ba 340 SUPERFAMILY SSF100950 90 337 5.12E-67 T 14-10-2018 IPR037171 NagB/RpiA transferase-like GYO_3719 94514f0b95e5fcd77d4ee5fa47aa84ba 340 Gene3D G3DSA:3.40.50.1360 90 340 7.6E-90 T 14-10-2018 GYO_3719 94514f0b95e5fcd77d4ee5fa47aa84ba 340 Gene3D G3DSA:1.10.10.10 19 89 5.7E-17 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily GYO_1728 aeafa953fd7bd2fb4a7ea13a766928ae 226 SUPERFAMILY SSF55729 17 149 1.56E-19 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase GYO_1728 aeafa953fd7bd2fb4a7ea13a766928ae 226 Gene3D G3DSA:3.40.630.30 12 225 5.0E-54 T 14-10-2018 GYO_1728 aeafa953fd7bd2fb4a7ea13a766928ae 226 Pfam PF00583 Acetyltransferase (GNAT) family 31 158 1.4E-13 T 14-10-2018 IPR000182 GNAT domain GYO_3559 36b2254d5db6c1c7dadeeeeb233d681c 292 Gene3D G3DSA:1.10.3720.10 46 290 4.4E-74 T 14-10-2018 IPR035906 MetI-like superfamily GYO_3559 36b2254d5db6c1c7dadeeeeb233d681c 292 SUPERFAMILY SSF161098 50 280 4.19E-60 T 14-10-2018 IPR035906 MetI-like superfamily GYO_3559 36b2254d5db6c1c7dadeeeeb233d681c 292 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 81 281 1.3E-17 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 GYO_2872 0250ec916b5b4c0a6317b54d39ca8dee 160 SUPERFAMILY SSF75169 6 158 1.13E-22 T 14-10-2018 IPR027396 DsrEFH-like GYO_2872 0250ec916b5b4c0a6317b54d39ca8dee 160 Pfam PF13686 DsrE/DsrF/DrsH-like family 5 159 9.8E-68 T 14-10-2018 IPR032836 DsrE2-like family GYO_2872 0250ec916b5b4c0a6317b54d39ca8dee 160 Gene3D G3DSA:3.40.1260.10 2 160 1.1E-66 T 14-10-2018 IPR027396 DsrEFH-like GYO_3631 6e284ba6f2954eacf4faf2955a26ffcb 192 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 48 182 8.4E-16 T 14-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 GYO_3631 6e284ba6f2954eacf4faf2955a26ffcb 192 SUPERFAMILY SSF88659 119 183 1.42E-14 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like GYO_3631 6e284ba6f2954eacf4faf2955a26ffcb 192 Pfam PF04545 Sigma-70, region 4 131 180 3.6E-13 T 14-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 GYO_3631 6e284ba6f2954eacf4faf2955a26ffcb 192 Gene3D G3DSA:1.20.140.160 45 185 2.5E-14 T 14-10-2018 GYO_1606 9902f5034174ebeb25e1c68858db779b 729 Pfam PF13231 Dolichyl-phosphate-mannose-protein mannosyltransferase 65 223 1.8E-32 T 14-10-2018 IPR038731 Glycosyltransferase RgtA/B/C/D-like GYO_0825 ac2d7a7f25916f5d000c535a34259022 106 SUPERFAMILY SSF46689 2 94 2.33E-13 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 GYO_0046 02d08407aac3871be894f68f7b361fc8 94 SMART SM00966 8 51 6.6E-10 T 14-10-2018 IPR007159 SpoVT-AbrB domain GO:0003677 GYO_0046 02d08407aac3871be894f68f7b361fc8 94 SUPERFAMILY SSF89447 1 52 1.23E-16 T 14-10-2018 IPR037914 SpoVT-AbrB domain superfamily GYO_0046 02d08407aac3871be894f68f7b361fc8 94 Pfam PF04014 Antidote-toxin recognition MazE, bacterial antitoxin 8 50 8.8E-12 T 14-10-2018 IPR007159 SpoVT-AbrB domain GO:0003677 GYO_0046 02d08407aac3871be894f68f7b361fc8 94 Gene3D G3DSA:2.10.260.10 1 51 1.4E-26 T 14-10-2018 GYO_0046 02d08407aac3871be894f68f7b361fc8 94 TIGRFAM TIGR01439 lp_hng_hel_AbrB: transcriptional regulator, AbrB family 8 49 4.6E-11 T 14-10-2018 IPR007159 SpoVT-AbrB domain GO:0003677 GYO_0756 69749e8224afcd7fa9c4955c6d3f53b1 290 Gene3D G3DSA:3.30.70.120 199 273 4.3E-15 T 14-10-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal GYO_0756 69749e8224afcd7fa9c4955c6d3f53b1 290 PIRSF PIRSF006483 1 288 1.5E-74 T 14-10-2018 IPR003740 Uncharacterised membrane protein YitT GYO_0756 69749e8224afcd7fa9c4955c6d3f53b1 290 Pfam PF10035 Uncharacterized protein conserved in bacteria (DUF2179) 227 281 2.8E-18 T 14-10-2018 IPR019264 Domain of unknown function DUF2179 GYO_0756 69749e8224afcd7fa9c4955c6d3f53b1 290 Pfam PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 18 221 9.3E-50 T 14-10-2018 IPR003740 Uncharacterised membrane protein YitT GYO_3879 18a34caf719ae6e281c3af272b39bc2d 81 Pfam PF03646 FlaG protein 5 79 1.3E-23 T 14-10-2018 IPR005186 FlaG protein GYO_3879 18a34caf719ae6e281c3af272b39bc2d 81 SUPERFAMILY SSF160214 4 80 1.7E-26 T 14-10-2018 IPR035924 FlaG-like superfamily GYO_3879 18a34caf719ae6e281c3af272b39bc2d 81 Gene3D G3DSA:3.30.160.170 1 77 4.7E-32 T 14-10-2018 IPR035924 FlaG-like superfamily GYO_2981 26fc40554963bee17f3193222de27a73 88 PIRSF PIRSF037258 1 88 3.8E-46 T 14-10-2018 IPR009309 Uncharacterised protein family UPF0297 GYO_2981 26fc40554963bee17f3193222de27a73 88 Pfam PF06135 Bacterial protein of unknown function (DUF965) 5 83 4.0E-38 T 14-10-2018 IPR009309 Uncharacterised protein family UPF0297 GYO_2981 26fc40554963bee17f3193222de27a73 88 Hamap MF_01507 UPF0297 protein . 1 85 28.679 T 14-10-2018 IPR009309 Uncharacterised protein family UPF0297 GYO_0874 fe9fba8de6935779e1ea56f7a8b94d33 228 Pfam PF04012 PspA/IM30 family 5 223 8.8E-40 T 14-10-2018 IPR007157 PspA/IM30 GYO_4036 409b260342bb9d1d13ffa3433cb6f312 418 Pfam PF13433 Periplasmic binding protein domain 50 409 3.1E-164 T 14-10-2018 GYO_4036 409b260342bb9d1d13ffa3433cb6f312 418 Gene3D G3DSA:3.40.50.2300 165 397 2.5E-155 T 14-10-2018 GYO_4036 409b260342bb9d1d13ffa3433cb6f312 418 SUPERFAMILY SSF53822 50 413 2.33E-108 T 14-10-2018 IPR028082 Periplasmic binding protein-like I GYO_4036 409b260342bb9d1d13ffa3433cb6f312 418 Gene3D G3DSA:3.40.50.2300 52 378 2.5E-155 T 14-10-2018 GYO_4036 409b260342bb9d1d13ffa3433cb6f312 418 TIGRFAM TIGR03407 urea_ABC_UrtA: urea ABC transporter, urea binding protein 50 406 1.5E-184 T 14-10-2018 IPR017777 Urea ABC transporter, substrate-binding protein UrtA-like GYO_2148 b71d334caac11ba5602b5883166dc66b 150 Pfam PF10710 Protein of unknown function (DUF2512) 1 138 2.6E-47 T 14-10-2018 IPR019649 Protein of unknown function DUF2512 GYO_4450 0f818e23407c14154004ef5132a79a30 264 SMART SM00849 13 218 1.6E-18 T 14-10-2018 IPR001279 Metallo-beta-lactamase GYO_4450 0f818e23407c14154004ef5132a79a30 264 Gene3D G3DSA:3.60.15.10 8 248 5.2E-41 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like GYO_4450 0f818e23407c14154004ef5132a79a30 264 SUPERFAMILY SSF56281 1 247 1.11E-44 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like GYO_4450 0f818e23407c14154004ef5132a79a30 264 Pfam PF00753 Metallo-beta-lactamase superfamily 12 218 5.6E-30 T 14-10-2018 IPR001279 Metallo-beta-lactamase GYO_0815 4c94cac4dc93f7ebf365557d4861613a 172 Pfam PF05163 DinB family 1 168 1.3E-49 T 14-10-2018 IPR007837 DNA damage-inducible protein DinB GYO_0815 4c94cac4dc93f7ebf365557d4861613a 172 Gene3D G3DSA:1.20.120.450 3 164 2.8E-43 T 14-10-2018 IPR034660 DinB/YfiT-like putative metalloenzymes GYO_0815 4c94cac4dc93f7ebf365557d4861613a 172 SUPERFAMILY SSF109854 6 150 1.74E-28 T 14-10-2018 IPR034660 DinB/YfiT-like putative metalloenzymes GYO_2349 8f7ee9593cd91dde754d072ea439d13c 116 Gene3D G3DSA:2.70.180.10 1 116 1.1E-53 T 14-10-2018 IPR036492 Hypothetical protein YojF superfamily GYO_2349 8f7ee9593cd91dde754d072ea439d13c 116 SUPERFAMILY SSF89442 1 116 1.11E-53 T 14-10-2018 IPR036492 Hypothetical protein YojF superfamily GYO_2349 8f7ee9593cd91dde754d072ea439d13c 116 Pfam PF08830 Protein of unknown function (DUF1806) 4 114 5.3E-51 T 14-10-2018 IPR014934 Protein of unknown function DUF1806 GYO_2557 ad68e2b2451a6403f20266dc055607ba 124 Pfam PF00583 Acetyltransferase (GNAT) family 30 112 1.0E-12 T 14-10-2018 IPR000182 GNAT domain GYO_2557 ad68e2b2451a6403f20266dc055607ba 124 SUPERFAMILY SSF55729 5 96 1.01E-14 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase GYO_2557 ad68e2b2451a6403f20266dc055607ba 124 Gene3D G3DSA:3.40.630.30 5 119 6.4E-15 T 14-10-2018 GYO_1714 b0de6ef053b86dc055c4d07bf4a222b6 445 PIRSF PIRSF038958 1 436 5.4E-71 T 14-10-2018 IPR024923 Peptidoglycan biosynthesis protein, SpoVB-type GYO_1714 b0de6ef053b86dc055c4d07bf4a222b6 445 Pfam PF01943 Polysaccharide biosynthesis protein 5 294 1.1E-24 T 14-10-2018 IPR002797 Polysaccharide biosynthesis protein GO:0016020 GYO_3473 ab3cfff0e9e8b7865e7264f36b6f4add 78 Pfam PF10842 Protein of unknown function (DUF2642) 8 72 4.5E-28 T 14-10-2018 IPR020139 Protein of unknown function DUF2642 GYO_3473 ab3cfff0e9e8b7865e7264f36b6f4add 78 ProDom PD058323 YUZF BH2251 3 72 5.0E-34 T 14-10-2018 IPR020139 Protein of unknown function DUF2642 GYO_1171 f51c0d3011a6e34799e7cc06534ea1d4 276 SUPERFAMILY SSF161098 74 255 4.84E-34 T 14-10-2018 IPR035906 MetI-like superfamily GYO_1171 f51c0d3011a6e34799e7cc06534ea1d4 276 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 98 268 1.5E-30 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 GYO_1171 f51c0d3011a6e34799e7cc06534ea1d4 276 Gene3D G3DSA:1.10.3720.10 70 269 3.0E-25 T 14-10-2018 IPR035906 MetI-like superfamily GYO_2699 3c01ba759abad32668fb6bfd9752b21c 399 Pfam PF09546 Stage III sporulation protein AE (spore_III_AE) 77 392 5.2E-108 T 14-10-2018 IPR014194 Sporulation stage III, protein AE GYO_2699 3c01ba759abad32668fb6bfd9752b21c 399 TIGRFAM TIGR02829 spore_III_AE: stage III sporulation protein AE 1 392 8.8E-160 T 14-10-2018 IPR014194 Sporulation stage III, protein AE GYO_2337 3faa82f180fdebcc534c50010a800189 321 Gene3D G3DSA:1.20.1530.20 1 307 2.7E-114 T 14-10-2018 IPR038770 Sodium/solute symporter superfamily GYO_2337 3faa82f180fdebcc534c50010a800189 321 Pfam PF01758 Sodium Bile acid symporter family 41 220 2.5E-52 T 14-10-2018 IPR002657 Bile acid:sodium symporter/arsenical resistance protein Acr3 GO:0016020 GYO_2337 3faa82f180fdebcc534c50010a800189 321 TIGRFAM TIGR00841 bass: bile acid transporter 1 315 1.9E-112 T 14-10-2018 IPR004710 Bile acid:sodium symporter GYO_0674 447a7f1f8a59fcfecf328ff6dbf56dc7 54 Pfam PF13076 Fur-regulated basic protein A 9 44 3.6E-17 T 14-10-2018 IPR025072 Fur-regulated basic protein A GYO_3153 39da30983de22942bf642eb718da1e00 126 Pfam PF01638 HxlR-like helix-turn-helix 16 104 3.1E-40 T 14-10-2018 IPR002577 Helix-turn-helix, HxlR type GYO_3153 39da30983de22942bf642eb718da1e00 126 SUPERFAMILY SSF46785 2 109 5.28E-33 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily GYO_3153 39da30983de22942bf642eb718da1e00 126 Gene3D G3DSA:1.10.10.10 2 109 6.0E-38 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily GYO_0133 2191f73dd27847ca7df015f0b4b44ba3 201 SUPERFAMILY SSF53335 7 200 6.69E-38 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase GYO_0133 2191f73dd27847ca7df015f0b4b44ba3 201 Gene3D G3DSA:3.40.50.150 6 201 1.8E-48 T 14-10-2018 GYO_0133 2191f73dd27847ca7df015f0b4b44ba3 201 Pfam PF05175 Methyltransferase small domain 28 197 4.1E-50 T 14-10-2018 IPR007848 Methyltransferase small domain GO:0008168 GYO_0925 a0e9499570b4370c073c956adedf1ada 396 Gene3D G3DSA:3.10.570.10 57 396 2.6E-135 T 14-10-2018 GYO_0925 a0e9499570b4370c073c956adedf1ada 396 PIRSF PIRSF012509 2 396 8.2E-167 T 14-10-2018 IPR011426 CamS sex pheromone cAM373 GYO_0925 a0e9499570b4370c073c956adedf1ada 396 Pfam PF07537 CamS sex pheromone cAM373 precursor 60 389 7.8E-129 T 14-10-2018 IPR011426 CamS sex pheromone cAM373 GYO_3277 f83cc839aa27994e259a0599c2f2d980 303 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 94 294 8.8E-21 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 GYO_3277 f83cc839aa27994e259a0599c2f2d980 303 SUPERFAMILY SSF161098 63 288 3.27E-61 T 14-10-2018 IPR035906 MetI-like superfamily GYO_3277 f83cc839aa27994e259a0599c2f2d980 303 Gene3D G3DSA:1.10.3720.10 59 302 7.1E-70 T 14-10-2018 IPR035906 MetI-like superfamily GYO_3277 f83cc839aa27994e259a0599c2f2d980 303 SUPERFAMILY SSF160964 22 67 2.35E-5 T 14-10-2018 GYO_0847 d7c2f4cb3ca8ca7f2d964b1174b31bf0 284 SUPERFAMILY SSF47240 1 283 3.56E-86 T 14-10-2018 IPR009078 Ferritin-like superfamily GYO_0847 d7c2f4cb3ca8ca7f2d964b1174b31bf0 284 Pfam PF05067 Manganese containing catalase 1 272 2.8E-66 T 14-10-2018 IPR007760 Manganese catalase GYO_0847 d7c2f4cb3ca8ca7f2d964b1174b31bf0 284 Gene3D G3DSA:1.20.1260.130 2 284 3.7E-102 T 14-10-2018 GYO_4260 2841bb90a0eaa518baddc6678fe52c12 102 Gene3D G3DSA:3.40.50.2300 1 101 1.1E-37 T 14-10-2018 GYO_4260 2841bb90a0eaa518baddc6678fe52c12 102 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 2 93 1.3E-21 T 14-10-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 GYO_4260 2841bb90a0eaa518baddc6678fe52c12 102 SUPERFAMILY SSF52794 1 98 1.8E-35 T 14-10-2018 IPR036095 PTS system IIB component-like superfamily GO:0008982|GO:0009401 GYO_4260 2841bb90a0eaa518baddc6678fe52c12 102 TIGRFAM TIGR00853 pts-lac: PTS system, lactose/cellobiose family IIB component 2 93 8.8E-39 T 14-10-2018 IPR013012 Phosphotransferase system, EIIB component, type 3 GO:0008982|GO:0009401 GYO_3429 2d4aad13a1e6c4d646f019d2d1f47595 164 Gene3D G3DSA:3.30.70.920 53 151 3.9E-21 T 14-10-2018 GYO_3429 2d4aad13a1e6c4d646f019d2d1f47595 164 SUPERFAMILY SSF46785 1 59 8.25E-8 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily GYO_3429 2d4aad13a1e6c4d646f019d2d1f47595 164 SUPERFAMILY SSF54909 64 145 4.16E-18 T 14-10-2018 IPR011008 Dimeric alpha-beta barrel GYO_3429 2d4aad13a1e6c4d646f019d2d1f47595 164 Gene3D G3DSA:1.10.10.10 1 52 3.2E-9 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily GYO_3429 2d4aad13a1e6c4d646f019d2d1f47595 164 Pfam PF01037 Lrp/AsnC ligand binding domain 71 142 1.3E-14 T 14-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain GYO_3429 2d4aad13a1e6c4d646f019d2d1f47595 164 SMART SM00344 1 112 2.2E-7 T 14-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 GYO_3429 2d4aad13a1e6c4d646f019d2d1f47595 164 Pfam PF13412 Winged helix-turn-helix DNA-binding 2 47 3.9E-6 T 14-10-2018 GYO_1116 52b6322618b306414ca006b8f563444f 293 Pfam PF02567 Phenazine biosynthesis-like protein 9 287 1.9E-92 T 14-10-2018 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 GYO_1116 52b6322618b306414ca006b8f563444f 293 PIRSF PIRSF016184 1 293 3.0E-75 T 14-10-2018 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 GYO_1116 52b6322618b306414ca006b8f563444f 293 Gene3D G3DSA:3.10.310.10 129 282 4.6E-39 T 14-10-2018 GYO_1116 52b6322618b306414ca006b8f563444f 293 TIGRFAM TIGR00654 PhzF_family: phenazine biosynthesis protein, PhzF family 3 293 8.6E-128 T 14-10-2018 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 GYO_1116 52b6322618b306414ca006b8f563444f 293 SUPERFAMILY SSF54506 4 286 1.57E-62 T 14-10-2018 GYO_1116 52b6322618b306414ca006b8f563444f 293 Gene3D G3DSA:3.10.310.10 1 128 3.0E-39 T 14-10-2018 GYO_1089 2f2b74aea6b78c25ef171d83d7905e5e 573 Pfam PF00664 ABC transporter transmembrane region 19 285 3.4E-42 T 14-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 GYO_1089 2f2b74aea6b78c25ef171d83d7905e5e 573 Gene3D G3DSA:3.40.50.300 322 571 1.1E-87 T 14-10-2018 GYO_1089 2f2b74aea6b78c25ef171d83d7905e5e 573 SMART SM00382 356 540 1.1E-12 T 14-10-2018 IPR003593 AAA+ ATPase domain GYO_1089 2f2b74aea6b78c25ef171d83d7905e5e 573 ProSitePatterns PS00211 ABC transporters family signature. 468 482 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 GYO_1089 2f2b74aea6b78c25ef171d83d7905e5e 573 SUPERFAMILY SSF90123 5 315 5.76E-72 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 GYO_1089 2f2b74aea6b78c25ef171d83d7905e5e 573 Gene3D G3DSA:1.20.1560.10 1 313 8.0E-83 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 GYO_1089 2f2b74aea6b78c25ef171d83d7905e5e 573 SUPERFAMILY SSF52540 322 565 1.74E-84 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase GYO_1089 2f2b74aea6b78c25ef171d83d7905e5e 573 Pfam PF00005 ABC transporter 347 496 6.4E-35 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 GYO_1860 59923e3c60ca316c367df6dd124e601a 311 Gene3D G3DSA:1.10.150.170 111 215 1.2E-108 T 14-10-2018 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain superfamily GO:0008168 GYO_1860 59923e3c60ca316c367df6dd124e601a 311 Pfam PF01795 MraW methylase family 2 310 2.6E-138 T 14-10-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 GYO_1860 59923e3c60ca316c367df6dd124e601a 311 Gene3D G3DSA:3.40.50.150 7 309 1.2E-108 T 14-10-2018 GYO_1860 59923e3c60ca316c367df6dd124e601a 311 PIRSF PIRSF004486 1 311 1.8E-111 T 14-10-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 GYO_1860 59923e3c60ca316c367df6dd124e601a 311 Hamap MF_01007 Ribosomal RNA small subunit methyltransferase H [rsmH]. 4 310 39.388 T 14-10-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 GYO_1860 59923e3c60ca316c367df6dd124e601a 311 SUPERFAMILY SSF81799 113 214 3.79E-36 T 14-10-2018 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain superfamily GO:0008168 GYO_1860 59923e3c60ca316c367df6dd124e601a 311 SUPERFAMILY SSF53335 4 309 4.99E-47 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase GYO_1860 59923e3c60ca316c367df6dd124e601a 311 TIGRFAM TIGR00006 TIGR00006: 16S rRNA (cytosine(1402)-N(4))-methyltransferase 2 309 2.5E-138 T 14-10-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 GYO_1119 65e66e44b3f243e3386589490f87f2c1 303 Pfam PF01370 NAD dependent epimerase/dehydratase family 3 214 2.7E-16 T 14-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 GYO_1119 65e66e44b3f243e3386589490f87f2c1 303 TIGRFAM TIGR01777 yfcH: TIGR01777 family protein 3 293 2.9E-108 T 14-10-2018 IPR010099 Epimerase family protein SDR39U1 GYO_1119 65e66e44b3f243e3386589490f87f2c1 303 Gene3D G3DSA:3.40.50.720 1 287 1.8E-69 T 14-10-2018 GYO_1119 65e66e44b3f243e3386589490f87f2c1 303 Pfam PF08338 Domain of unknown function (DUF1731) 250 296 2.1E-14 T 14-10-2018 IPR013549 Domain of unknown function DUF1731 GYO_1119 65e66e44b3f243e3386589490f87f2c1 303 SUPERFAMILY SSF51735 1 288 6.72E-39 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily GYO_1878 1ed00a29e25f07c4285ddeadf37844e0 317 Pfam PF03419 Sporulation factor SpoIIGA 11 307 1.0E-84 T 14-10-2018 IPR005081 Sigma-E processing peptidase SpoIIGA GO:0004190|GO:0006508|GO:0030436 GYO_1878 1ed00a29e25f07c4285ddeadf37844e0 317 TIGRFAM TIGR02854 spore_II_GA: sigma-E processing peptidase SpoIIGA 10 308 1.5E-90 T 14-10-2018 IPR005081 Sigma-E processing peptidase SpoIIGA GO:0004190|GO:0006508|GO:0030436 GYO_1878 1ed00a29e25f07c4285ddeadf37844e0 317 PIRSF PIRSF018571 9 310 1.6E-105 T 14-10-2018 IPR005081 Sigma-E processing peptidase SpoIIGA GO:0004190|GO:0006508|GO:0030436 GYO_1659 0fb45a1672885fd089b3d448d52ff2e0 364 Gene3D G3DSA:3.40.50.2000 184 345 2.9E-12 T 14-10-2018 GYO_1659 0fb45a1672885fd089b3d448d52ff2e0 364 SUPERFAMILY SSF53756 77 363 1.26E-27 T 14-10-2018 GYO_1659 0fb45a1672885fd089b3d448d52ff2e0 364 Pfam PF06925 Monogalactosyldiacylglycerol (MGDG) synthase 16 179 1.8E-44 T 14-10-2018 IPR009695 Diacylglycerol glucosyltransferase, N-terminal GO:0009247|GO:0016758 GYO_3278 7be092b97282c101d94a01fab8afc372 276 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 84 267 1.8E-17 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 GYO_3278 7be092b97282c101d94a01fab8afc372 276 Gene3D G3DSA:1.10.3720.10 2 263 3.4E-58 T 14-10-2018 IPR035906 MetI-like superfamily GYO_3278 7be092b97282c101d94a01fab8afc372 276 SUPERFAMILY SSF161098 10 276 1.19E-66 T 14-10-2018 IPR035906 MetI-like superfamily GYO_2984 5d30208a7959b1436bb83c294935ac3b 43 Pfam PF13056 Protein of unknown function (DUF3918) 1 43 1.2E-22 T 14-10-2018 IPR025029 Protein of unknown function DUF3918 GYO_2736 6b77b05b9c82597d108f1a33a9f4b620 136 SUPERFAMILY SSF54631 1 115 3.16E-31 T 14-10-2018 GYO_2736 6b77b05b9c82597d108f1a33a9f4b620 136 Pfam PF00571 CBS domain 66 115 1.2E-8 T 14-10-2018 IPR000644 CBS domain GYO_2736 6b77b05b9c82597d108f1a33a9f4b620 136 Pfam PF00571 CBS domain 3 54 9.4E-14 T 14-10-2018 IPR000644 CBS domain GYO_2736 6b77b05b9c82597d108f1a33a9f4b620 136 SMART SM00116 73 120 0.0011 T 14-10-2018 IPR000644 CBS domain GYO_2736 6b77b05b9c82597d108f1a33a9f4b620 136 SMART SM00116 10 57 2.5E-6 T 14-10-2018 IPR000644 CBS domain GYO_2736 6b77b05b9c82597d108f1a33a9f4b620 136 Gene3D G3DSA:3.10.580.10 1 120 7.5E-35 T 14-10-2018 GYO_4228 25ac015a8c9e9c4e1ed648496c378f2b 225 TIGRFAM TIGR00659 TIGR00659: TIGR00659 family protein 2 223 1.3E-99 T 14-10-2018 IPR005261 Conserved hypothetical protein CHP00659 GYO_4228 25ac015a8c9e9c4e1ed648496c378f2b 225 Pfam PF04172 LrgB-like family 11 223 6.5E-72 T 14-10-2018 IPR007300 CidB/LrgB family GYO_1126 d404b247e146cc79b5df6c645a949190 110 Pfam PF13630 SdpI/YhfL protein family 25 88 4.5E-15 T 14-10-2018 IPR025962 SdpI/YhfL protein family GYO_3698 f06218648b0acc84f2b3262703d61ad4 306 SUPERFAMILY SSF53850 34 303 1.51E-66 T 14-10-2018 GYO_3698 f06218648b0acc84f2b3262703d61ad4 306 Pfam PF04069 Substrate binding domain of ABC-type glycine betaine transport system 35 300 1.5E-56 T 14-10-2018 IPR007210 ABC-type glycine betaine transport system, substrate-binding domain GO:0022857|GO:0043190|GO:0055085 GYO_3698 f06218648b0acc84f2b3262703d61ad4 306 Gene3D G3DSA:3.40.190.10 37 299 2.2E-96 T 14-10-2018 GYO_3698 f06218648b0acc84f2b3262703d61ad4 306 Gene3D G3DSA:3.40.190.120 139 243 2.2E-96 T 14-10-2018 GYO_4203 ef758650288d7e9d4e5cb64f48781c62 393 Pfam PF01098 Cell cycle protein 9 383 6.5E-115 T 14-10-2018 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA GO:0016021|GO:0051301 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 GYO_4203 ef758650288d7e9d4e5cb64f48781c62 393 ProSitePatterns PS00428 Cell cycle proteins ftsW / rodA / spoVE signature. 341 365 - T 14-10-2018 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site GO:0016021 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 GYO_4026 155065a8b580f46b76cb17d645f9ed5b 129 ProDom PD031895 YWNG MEMBRANE TRANSMEMBRANE YWNC 4 129 2.0E-50 T 14-10-2018 IPR035287 Protein of unknown function DUF5362 GYO_4026 155065a8b580f46b76cb17d645f9ed5b 129 Pfam PF17319 Family of unknown function (DUF5362) 12 107 3.2E-15 T 14-10-2018 IPR035287 Protein of unknown function DUF5362 GYO_1196 70c80fba721aa6cc5f15e6755885ac73 305 SUPERFAMILY SSF52540 2 232 1.64E-62 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase GYO_1196 70c80fba721aa6cc5f15e6755885ac73 305 Gene3D G3DSA:3.40.50.300 1 237 5.9E-61 T 14-10-2018 GYO_1196 70c80fba721aa6cc5f15e6755885ac73 305 Pfam PF00005 ABC transporter 21 161 2.1E-29 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 GYO_1196 70c80fba721aa6cc5f15e6755885ac73 305 SMART SM00382 29 209 7.3E-14 T 14-10-2018 IPR003593 AAA+ ATPase domain GYO_1196 70c80fba721aa6cc5f15e6755885ac73 305 ProSitePatterns PS00211 ABC transporters family signature. 133 147 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 GYO_3315 8de9b9b735cd313a13ab81392ce71373 134 TIGRFAM TIGR01593 holin_tox_secr: toxin secretion/phage lysis holin 12 133 4.0E-38 T 14-10-2018 IPR006480 Bacteriophage holin family GYO_3315 8de9b9b735cd313a13ab81392ce71373 134 Pfam PF05105 Bacteriophage holin family 18 128 3.2E-26 T 14-10-2018 IPR006480 Bacteriophage holin family GYO_0072 053055719dfa92688ed5874a723813e6 211 TIGRFAM TIGR02893 spore_yabQ: spore cortex biosynthesis protein YabQ 2 130 3.5E-47 T 14-10-2018 IPR014242 Spore cortex biosynthesis protein, YabQ GYO_0072 053055719dfa92688ed5874a723813e6 211 Pfam PF09578 Spore cortex protein YabQ (Spore_YabQ) 12 87 1.5E-20 T 14-10-2018 IPR019074 Spore cortex biosynthesis protein, YabQ-like GYO_3578 b2f2ee52215e482bd9535f3b6c02169a 114 Gene3D G3DSA:3.30.1050.10 15 103 3.1E-8 T 14-10-2018 IPR036527 SCP2 sterol-binding domain superfamily GYO_3578 b2f2ee52215e482bd9535f3b6c02169a 114 Pfam PF02036 SCP-2 sterol transfer family 21 101 3.8E-7 T 14-10-2018 IPR003033 SCP2 sterol-binding domain GYO_3578 b2f2ee52215e482bd9535f3b6c02169a 114 SUPERFAMILY SSF55718 27 109 1.37E-8 T 14-10-2018 IPR036527 SCP2 sterol-binding domain superfamily GYO_1004 0e320e0a7ebbd0d2508361cc9f0f3e7e 181 Pfam PF00583 Acetyltransferase (GNAT) family 53 153 4.6E-15 T 14-10-2018 IPR000182 GNAT domain GYO_1004 0e320e0a7ebbd0d2508361cc9f0f3e7e 181 Gene3D G3DSA:3.40.630.30 12 179 2.9E-39 T 14-10-2018 GYO_1004 0e320e0a7ebbd0d2508361cc9f0f3e7e 181 SUPERFAMILY SSF55729 15 180 5.66E-31 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase GYO_4498 50e09783e0afff0cf678a8944321ca37 451 SUPERFAMILY SSF103473 14 448 2.62E-77 T 14-10-2018 IPR036259 MFS transporter superfamily GYO_4498 50e09783e0afff0cf678a8944321ca37 451 Gene3D G3DSA:1.20.1250.20 25 451 4.5E-71 T 14-10-2018 GYO_4498 50e09783e0afff0cf678a8944321ca37 451 Pfam PF07690 Major Facilitator Superfamily 37 325 5.0E-31 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 GYO_3382 bc5aba0a4836c8f12efc34eacb77421f 193 SUPERFAMILY SSF50800 1 179 3.56E-51 T 14-10-2018 IPR011037 Pyruvate kinase-like, insert domain superfamily GYO_3382 bc5aba0a4836c8f12efc34eacb77421f 193 Gene3D G3DSA:2.40.33.20 1 193 8.0E-84 T 14-10-2018 GYO_1766 e89462444ba95ac3275e49c06ed3dbaa 157 Gene3D G3DSA:3.90.1170.40 1 145 3.8E-55 T 14-10-2018 IPR036563 Molybdopterin biosynthesis MoaE subunit superfamily GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|MetaCyc: PWY-7887|Reactome: R-HSA-947581 GYO_1766 e89462444ba95ac3275e49c06ed3dbaa 157 Pfam PF02391 MoaE protein 6 117 3.5E-38 T 14-10-2018 IPR003448 Molybdopterin biosynthesis MoaE GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|MetaCyc: PWY-7887|Reactome: R-HSA-947581 GYO_1766 e89462444ba95ac3275e49c06ed3dbaa 157 SUPERFAMILY SSF54690 5 136 1.23E-46 T 14-10-2018 IPR036563 Molybdopterin biosynthesis MoaE subunit superfamily GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|MetaCyc: PWY-7887|Reactome: R-HSA-947581 GYO_1234 9b4ebde1366304dcef11fa4e3f767f13 465 Pfam PF13520 Amino acid permease 28 438 5.2E-64 T 14-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 GYO_1234 9b4ebde1366304dcef11fa4e3f767f13 465 TIGRFAM TIGR00909 2A0306: amino acid transporter 24 456 2.1E-195 T 14-10-2018 IPR004758 Amino acid transporter GYO_1234 9b4ebde1366304dcef11fa4e3f767f13 465 PIRSF PIRSF006060 14 464 1.5E-90 T 14-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 GYO_1234 9b4ebde1366304dcef11fa4e3f767f13 465 Gene3D G3DSA:1.20.1740.10 22 465 1.1E-128 T 14-10-2018 GYO_0478 f15e3be87c23334676f450b9bebc8072 310 Gene3D G3DSA:3.20.20.100 2 310 7.1E-114 T 14-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily GYO_0478 f15e3be87c23334676f450b9bebc8072 310 SUPERFAMILY SSF51430 3 309 1.57E-95 T 14-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily GYO_0478 f15e3be87c23334676f450b9bebc8072 310 PRINTS PR00069 Aldo-keto reductase signature 142 159 7.3E-17 T 14-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 GYO_0478 f15e3be87c23334676f450b9bebc8072 310 PRINTS PR00069 Aldo-keto reductase signature 111 129 7.3E-17 T 14-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 GYO_0478 f15e3be87c23334676f450b9bebc8072 310 PRINTS PR00069 Aldo-keto reductase signature 45 69 7.3E-17 T 14-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 GYO_0478 f15e3be87c23334676f450b9bebc8072 310 PRINTS PR00069 Aldo-keto reductase signature 242 266 7.3E-17 T 14-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 GYO_0478 f15e3be87c23334676f450b9bebc8072 310 Pfam PF00248 Aldo/keto reductase family 16 305 1.1E-75 T 14-10-2018 IPR023210 NADP-dependent oxidoreductase domain GYO_4167 bc2031404e283bde6eb3de7e8896abad 154 Gene3D G3DSA:2.60.40.3490 28 154 2.2E-49 T 14-10-2018 IPR038480 YuaB-like superfamily GYO_4167 bc2031404e283bde6eb3de7e8896abad 154 ProDom PD034110 YWEA MEMBRANE YUAB TRANSMEMBRANE ORF-1 1 154 1.0E-83 T 14-10-2018 IPR034650 YuaB-like GYO_1843 9159fa474423884c6002af6ac6500581 79 Pfam PF14003 YlbE-like protein 13 73 1.2E-29 T 14-10-2018 IPR025613 YlbE-like protein GYO_4394 f53099dc0447e114a8b4f5444ab366d6 141 Pfam PF06271 RDD family 9 137 6.2E-17 T 14-10-2018 IPR010432 RDD GYO_4148 0ae89433b426cadb37b549e31c600822 259 TIGRFAM TIGR02894 DNA_bind_RsfA: transcription factor, RsfA family 3 79 4.4E-44 T 14-10-2018 IPR014243 Transcription factor, RsfA GYO_2601 ebb68c45228dc9429ee2393c1d9960f7 305 Gene3D G3DSA:3.40.50.1820 52 304 3.3E-45 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold GYO_2601 ebb68c45228dc9429ee2393c1d9960f7 305 Pfam PF10142 PhoPQ-activated pathogenicity-related protein 228 304 4.9E-6 T 14-10-2018 IPR009199 PhoPQ-activated pathogenicity-related protein, PqaA type GYO_2601 ebb68c45228dc9429ee2393c1d9960f7 305 Pfam PF00561 alpha/beta hydrolase fold 82 186 2.5E-11 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 GYO_2601 ebb68c45228dc9429ee2393c1d9960f7 305 SUPERFAMILY SSF53474 55 299 3.46E-44 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold GYO_2177 dab6b1d17a0d9f3b99a7354d5eef1747 135 SUPERFAMILY SSF51735 2 132 5.07E-39 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily GYO_2177 dab6b1d17a0d9f3b99a7354d5eef1747 135 Gene3D G3DSA:3.40.50.720 1 135 5.9E-38 T 14-10-2018 GYO_2177 dab6b1d17a0d9f3b99a7354d5eef1747 135 Pfam PF13380 CoA binding domain 17 131 2.7E-35 T 14-10-2018 IPR003781 CoA-binding GO:0048037 GYO_2177 dab6b1d17a0d9f3b99a7354d5eef1747 135 SMART SM00881 12 105 5.6E-16 T 14-10-2018 IPR003781 CoA-binding GO:0048037 GYO_4174 0563a082bdd133e71d3bab92a76f0908 373 Gene3D G3DSA:3.90.1210.10 304 373 3.8E-28 T 14-10-2018 GYO_4174 0563a082bdd133e71d3bab92a76f0908 373 SUPERFAMILY SSF51269 298 364 2.67E-18 T 14-10-2018 IPR036732 Antifreeze-like/N-acetylneuraminic acid synthase C-terminal domain superfamily Reactome: R-HSA-4085001 GYO_4174 0563a082bdd133e71d3bab92a76f0908 373 Gene3D G3DSA:3.20.20.70 1 303 2.5E-117 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 GYO_4174 0563a082bdd133e71d3bab92a76f0908 373 SUPERFAMILY SSF51569 3 295 1.95E-85 T 14-10-2018 GYO_4174 0563a082bdd133e71d3bab92a76f0908 373 Pfam PF03102 NeuB family 37 274 8.7E-78 T 14-10-2018 IPR013132 N-acetylneuraminic acid synthase, N-terminal GO:0016051 Reactome: R-HSA-4085001 GYO_4512 a6cf5401eb4e7d5c492b3c437a0729be 253 Gene3D G3DSA:3.40.50.300 1 252 4.0E-85 T 14-10-2018 GYO_4512 a6cf5401eb4e7d5c492b3c437a0729be 253 Pfam PF13614 AAA domain 2 178 1.9E-73 T 14-10-2018 IPR025669 AAA domain GYO_4512 a6cf5401eb4e7d5c492b3c437a0729be 253 PIRSF PIRSF009320 2 83 2.3E-15 T 14-10-2018 GYO_4512 a6cf5401eb4e7d5c492b3c437a0729be 253 PIRSF PIRSF009320 90 251 5.5E-8 T 14-10-2018 GYO_4512 a6cf5401eb4e7d5c492b3c437a0729be 253 SUPERFAMILY SSF52540 2 251 9.94E-73 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase GYO_4512 a6cf5401eb4e7d5c492b3c437a0729be 253 PRINTS PR00091 Nitrogenase component II signature 31 46 8.7E-5 T 14-10-2018 GYO_4512 a6cf5401eb4e7d5c492b3c437a0729be 253 PRINTS PR00091 Nitrogenase component II signature 9 22 8.7E-5 T 14-10-2018 GYO_4506 0d6c566e9be81fc4d28eadef06daf3ff 47 SUPERFAMILY SSF52540 1 45 4.8E-21 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase GYO_4506 0d6c566e9be81fc4d28eadef06daf3ff 47 Gene3D G3DSA:3.40.50.300 4 47 1.1E-19 T 14-10-2018 GYO_4506 0d6c566e9be81fc4d28eadef06daf3ff 47 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 5 25 1.4E-18 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 GYO_4506 0d6c566e9be81fc4d28eadef06daf3ff 47 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 26 44 1.4E-18 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 GYO_4506 0d6c566e9be81fc4d28eadef06daf3ff 47 Pfam PF01926 50S ribosome-binding GTPase 5 45 1.1E-14 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 GYO_1130 3ff22bfda0616e8455ae737e568959c4 327 Pfam PF04307 LexA-binding, inner membrane-associated putative hydrolase 1 169 1.8E-26 T 14-10-2018 IPR007404 LexA-binding, inner membrane-associated putative hydrolase GYO_2423 be86c58e7aef78ff7eedadb7c8449c75 151 SUPERFAMILY SSF53098 2 123 7.59E-28 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily GYO_2423 be86c58e7aef78ff7eedadb7c8449c75 151 Pfam PF13456 Reverse transcriptase-like 7 125 3.1E-17 T 14-10-2018 IPR002156 Ribonuclease H domain GO:0003676|GO:0004523 GYO_2423 be86c58e7aef78ff7eedadb7c8449c75 151 Gene3D G3DSA:3.30.420.10 3 133 1.7E-29 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 GYO_3026 04cbc936c4670a5012e348f36ece3461 270 Pfam PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain 2 87 6.0E-24 T 14-10-2018 IPR022412 Quinolinate phosphoribosyl transferase, N-terminal GO:0016763 Reactome: R-HSA-196807 GYO_3026 04cbc936c4670a5012e348f36ece3461 270 PIRSF PIRSF006250 1 258 6.4E-106 T 14-10-2018 IPR027277 Nicotinate-nucleotide pyrophosphorylase/Putative pyrophosphorylase ModD Reactome: R-HSA-196807 GYO_3026 04cbc936c4670a5012e348f36ece3461 270 TIGRFAM TIGR00078 nadC: nicotinate-nucleotide diphosphorylase (carboxylating) 2 255 7.5E-98 T 14-10-2018 IPR004393 Nicotinate-nucleotide pyrophosphorylase GO:0004514|GO:0019363 KEGG: 00760+2.4.2.19|MetaCyc: PWY-5316|MetaCyc: PWY-5653|MetaCyc: PWY-7342|Reactome: R-HSA-196807 GYO_3026 04cbc936c4670a5012e348f36ece3461 270 SUPERFAMILY SSF51690 89 255 1.49E-58 T 14-10-2018 IPR036068 Nicotinate phosphoribosyltransferase-like, C-terminal GO:0004514|GO:0009435 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381 GYO_3026 04cbc936c4670a5012e348f36ece3461 270 Pfam PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain 89 254 1.4E-65 T 14-10-2018 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal GO:0004514|GO:0009435 Reactome: R-HSA-196807 GYO_3026 04cbc936c4670a5012e348f36ece3461 270 SUPERFAMILY SSF54675 2 88 1.29E-22 T 14-10-2018 GYO_3026 04cbc936c4670a5012e348f36ece3461 270 Gene3D G3DSA:3.20.20.70 103 245 7.2E-99 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 GYO_3026 04cbc936c4670a5012e348f36ece3461 270 Gene3D G3DSA:3.90.1170.20 2 253 7.2E-99 T 14-10-2018 IPR037128 Quinolinate phosphoribosyl transferase, N-terminal domain superfamily GO:0016763 Reactome: R-HSA-196807 GYO_0127 6e8fd455d63c30958631ab1833d33080 59 Pfam PF00584 SecE/Sec61-gamma subunits of protein translocation complex 5 57 9.2E-21 T 14-10-2018 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit GO:0006605|GO:0006886|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 GYO_0127 6e8fd455d63c30958631ab1833d33080 59 Gene3D G3DSA:1.20.5.1030 1 58 2.6E-19 T 14-10-2018 IPR038379 SecE superfamily GYO_0127 6e8fd455d63c30958631ab1833d33080 59 TIGRFAM TIGR00964 secE_bact: preprotein translocase, SecE subunit 3 58 2.8E-24 T 14-10-2018 IPR005807 SecE subunit of protein translocation complex, bacterial-like GO:0009306|GO:0015450|GO:0016021 GYO_0127 6e8fd455d63c30958631ab1833d33080 59 ProSitePatterns PS01067 Protein secE/sec61-gamma signature. 6 34 - T 14-10-2018 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit GO:0006605|GO:0006886|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 GYO_0127 6e8fd455d63c30958631ab1833d33080 59 Hamap MF_00422 Protein translocase subunit SecE [secE]. 1 56 13.029 T 14-10-2018 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit GO:0006605|GO:0006886|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 GYO_4235 f3c775ce0928b011027c3aad7cb87c0a 440 TIGRFAM TIGR00410 lacE: PTS system, lactose/cellobiose family IIC component 12 434 7.1E-210 T 14-10-2018 IPR004501 Phosphotransferase system, EIIC component, type 3 GO:0008982|GO:0009401|GO:0016021 GYO_4235 f3c775ce0928b011027c3aad7cb87c0a 440 TIGRFAM TIGR00359 cello_pts_IIC: PTS system, cellobiose-specific IIC component 12 434 7.1E-210 T 14-10-2018 IPR004796 Phosphotransferase system, cellobiose-type IIC component GO:0008982|GO:0009401|GO:0016021 GYO_4235 f3c775ce0928b011027c3aad7cb87c0a 440 PIRSF PIRSF006351 1 438 2.2E-152 T 14-10-2018 IPR004796 Phosphotransferase system, cellobiose-type IIC component GO:0008982|GO:0009401|GO:0016021 GYO_4235 f3c775ce0928b011027c3aad7cb87c0a 440 Pfam PF02378 Phosphotransferase system, EIIC 29 359 9.2E-77 T 14-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 GYO_4063 7e168d7b6ec9765d036a7d577396ab8a 127 ProDom PD020811 ATP SYNTHASE I ION HYDROLASE SUBUNIT I CF0 MEMBRANE HYDROGEN 23 127 1.0E-55 T 14-10-2018 GYO_4063 7e168d7b6ec9765d036a7d577396ab8a 127 Pfam PF03899 ATP synthase I chain 10 105 5.4E-19 T 14-10-2018 IPR005598 ATP synthase protein I GYO_2854 a4a278167ac55111a4659b5f59d87e19 219 Pfam PF08348 YheO-like PAS domain 8 120 6.4E-38 T 14-10-2018 IPR013559 YheO-like GYO_2854 a4a278167ac55111a4659b5f59d87e19 219 ProDom PD037769 DNA-BINDING YHEO UNCHARACTERIZED BACTERIA SIMILAR HI0575 CONTAINING TRANSCRIPTION REGULATOR HELIX-TURN-HELIX 6 111 2.0E-53 T 14-10-2018 IPR013559 YheO-like GYO_2854 a4a278167ac55111a4659b5f59d87e19 219 Pfam PF13309 HTH domain 155 213 8.7E-22 T 14-10-2018 IPR039445 Transcriptional regulator DauR-like, HTH domain GYO_0948 93965b8aab8ecb12bfc3b9b4fa8d32bb 147 Gene3D G3DSA:3.10.450.50 1 147 4.6E-49 T 14-10-2018 GYO_0948 93965b8aab8ecb12bfc3b9b4fa8d32bb 147 Pfam PF12680 SnoaL-like domain 14 121 8.6E-13 T 14-10-2018 IPR037401 SnoaL-like domain GYO_0948 93965b8aab8ecb12bfc3b9b4fa8d32bb 147 SUPERFAMILY SSF54427 11 136 7.15E-31 T 14-10-2018 IPR032710 NTF2-like domain superfamily GYO_4488 72d4cfe2e22d9e2c90caeb0b88235ed1 117 Pfam PF01638 HxlR-like helix-turn-helix 27 116 6.7E-34 T 14-10-2018 IPR002577 Helix-turn-helix, HxlR type GYO_4488 72d4cfe2e22d9e2c90caeb0b88235ed1 117 Gene3D G3DSA:1.10.10.10 10 117 5.1E-37 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily GYO_4488 72d4cfe2e22d9e2c90caeb0b88235ed1 117 SUPERFAMILY SSF46785 17 115 2.14E-31 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily GYO_3920 5ae63b19e5f929829cd4ae5e179f8ebe 659 SUPERFAMILY SSF53448 28 244 2.69E-50 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases GYO_3920 5ae63b19e5f929829cd4ae5e179f8ebe 659 Gene3D G3DSA:3.90.550.10 26 223 8.1E-50 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases GYO_3920 5ae63b19e5f929829cd4ae5e179f8ebe 659 Pfam PF00535 Glycosyl transferase family 2 32 155 3.2E-35 T 14-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 GYO_1603 796c7b89bc9487c942cb8ba383a53777 438 Pfam PF13520 Amino acid permease 12 404 4.5E-60 T 14-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 GYO_1603 796c7b89bc9487c942cb8ba383a53777 438 PIRSF PIRSF006060 1 437 2.8E-81 T 14-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 GYO_1603 796c7b89bc9487c942cb8ba383a53777 438 Gene3D G3DSA:1.20.1740.10 7 438 2.0E-92 T 14-10-2018 GYO_3499 6b584972fd40fb557f0ef194ce9c6ed6 217 Pfam PF06725 3D domain 123 184 1.1E-20 T 14-10-2018 IPR010611 3D domain GO:0004553|GO:0009254|GO:0019867 GYO_3499 6b584972fd40fb557f0ef194ce9c6ed6 217 SUPERFAMILY SSF50685 123 165 3.07E-9 T 14-10-2018 IPR036908 RlpA-like domain superfamily GYO_1432 db7e212b70ea3895a325c2eb0c9fba0f 244 Gene3D G3DSA:3.40.50.1820 32 179 1.5E-5 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold GYO_1432 db7e212b70ea3895a325c2eb0c9fba0f 244 SUPERFAMILY SSF53474 45 242 3.21E-10 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold GYO_1536 686ea62a6f55b31ca01ab803035144d0 140 Pfam PF07849 Protein of unknown function (DUF1641) 101 121 1.1E-5 T 14-10-2018 IPR012440 Protein of unknown function DUF1641 GYO_4395 0443d18d275b5ea6dae578d35ce482bf 141 Pfam PF17369 Family of unknown function (DUF5391) 2 131 7.6E-46 T 14-10-2018 IPR020204 Uncharacterised protein family, YxaJ GYO_4395 0443d18d275b5ea6dae578d35ce482bf 141 ProDom PD086672 YXAJ MEMBRANE TRANSMEMBRANE 3 129 2.0E-53 T 14-10-2018 IPR020204 Uncharacterised protein family, YxaJ GYO_2762 0649b0a4a7b5357d997ba7b4797a9e4f 294 SUPERFAMILY SSF161098 17 279 2.88E-40 T 14-10-2018 IPR035906 MetI-like superfamily GYO_2762 0649b0a4a7b5357d997ba7b4797a9e4f 294 TIGRFAM TIGR00974 3a0107s02c: phosphate ABC transporter, permease protein PstA 8 285 1.0E-79 T 14-10-2018 IPR005672 Phosphate transport system permease protein PstA GO:0005315|GO:0005887|GO:0035435 GYO_2762 0649b0a4a7b5357d997ba7b4797a9e4f 294 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 80 292 3.1E-57 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 GYO_2762 0649b0a4a7b5357d997ba7b4797a9e4f 294 Gene3D G3DSA:1.10.3720.10 58 289 2.9E-35 T 14-10-2018 IPR035906 MetI-like superfamily GYO_2279 d39205871725944058e80ccfc3411aeb 243 Gene3D G3DSA:2.60.120.200 113 243 5.9E-51 T 14-10-2018 GYO_2279 d39205871725944058e80ccfc3411aeb 243 Gene3D G3DSA:2.60.120.200 17 112 1.7E-20 T 14-10-2018 GYO_2279 d39205871725944058e80ccfc3411aeb 243 Pfam PF00722 Glycosyl hydrolases family 16 56 238 1.6E-45 T 14-10-2018 IPR000757 Glycoside hydrolase family 16 GO:0004553|GO:0005975 GYO_2279 d39205871725944058e80ccfc3411aeb 243 ProSitePatterns PS01034 Glycosyl hydrolases family 16 active sites. 134 144 - T 14-10-2018 IPR008263 Glycoside hydrolase, family 16, active site GO:0004553|GO:0005975 GYO_2279 d39205871725944058e80ccfc3411aeb 243 PRINTS PR00737 Glycosyl hydrolase family 16 signature 165 182 3.7E-80 T 14-10-2018 IPR008264 Beta-glucanase GO:0004553|GO:0005975 GYO_2279 d39205871725944058e80ccfc3411aeb 243 PRINTS PR00737 Glycosyl hydrolase family 16 signature 131 146 3.7E-80 T 14-10-2018 IPR008264 Beta-glucanase GO:0004553|GO:0005975 GYO_2279 d39205871725944058e80ccfc3411aeb 243 PRINTS PR00737 Glycosyl hydrolase family 16 signature 91 109 3.7E-80 T 14-10-2018 IPR008264 Beta-glucanase GO:0004553|GO:0005975 GYO_2279 d39205871725944058e80ccfc3411aeb 243 PRINTS PR00737 Glycosyl hydrolase family 16 signature 205 227 3.7E-80 T 14-10-2018 IPR008264 Beta-glucanase GO:0004553|GO:0005975 GYO_2279 d39205871725944058e80ccfc3411aeb 243 PRINTS PR00737 Glycosyl hydrolase family 16 signature 185 202 3.7E-80 T 14-10-2018 IPR008264 Beta-glucanase GO:0004553|GO:0005975 GYO_2279 d39205871725944058e80ccfc3411aeb 243 PRINTS PR00737 Glycosyl hydrolase family 16 signature 147 160 3.7E-80 T 14-10-2018 IPR008264 Beta-glucanase GO:0004553|GO:0005975 GYO_2279 d39205871725944058e80ccfc3411aeb 243 PRINTS PR00737 Glycosyl hydrolase family 16 signature 110 126 3.7E-80 T 14-10-2018 IPR008264 Beta-glucanase GO:0004553|GO:0005975 GYO_2279 d39205871725944058e80ccfc3411aeb 243 PRINTS PR00737 Glycosyl hydrolase family 16 signature 229 241 3.7E-80 T 14-10-2018 IPR008264 Beta-glucanase GO:0004553|GO:0005975 GYO_2279 d39205871725944058e80ccfc3411aeb 243 SUPERFAMILY SSF49899 34 242 2.54E-61 T 14-10-2018 IPR013320 Concanavalin A-like lectin/glucanase domain superfamily GYO_2766 e2be29bbdb7d737d55bd23d6178a8ec2 430 SUPERFAMILY SSF103473 14 410 5.14E-33 T 14-10-2018 IPR036259 MFS transporter superfamily GYO_2766 e2be29bbdb7d737d55bd23d6178a8ec2 430 Gene3D G3DSA:1.20.1250.20 216 405 1.9E-7 T 14-10-2018 GYO_2766 e2be29bbdb7d737d55bd23d6178a8ec2 430 Pfam PF07690 Major Facilitator Superfamily 60 228 2.7E-10 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 GYO_2766 e2be29bbdb7d737d55bd23d6178a8ec2 430 Gene3D G3DSA:1.20.1250.20 15 204 2.3E-14 T 14-10-2018 GYO_1164 a90e5ed8018e2747a8d36aa8a66777cf 230 Pfam PF03575 Peptidase family S51 4 197 7.5E-61 T 14-10-2018 IPR005320 Peptidase S51 GO:0006508|GO:0008236 GYO_1164 a90e5ed8018e2747a8d36aa8a66777cf 230 SUPERFAMILY SSF52317 5 199 9.5E-30 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like GYO_1164 a90e5ed8018e2747a8d36aa8a66777cf 230 Gene3D G3DSA:3.40.50.880 15 219 6.2E-40 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like GYO_3148 cd8d7f211e34eb2c13a46d98be267bce 311 SMART SM00382 160 284 2.0E-6 T 14-10-2018 IPR003593 AAA+ ATPase domain GYO_3148 cd8d7f211e34eb2c13a46d98be267bce 311 Pfam PF07319 Primosomal protein DnaI N-terminus 1 98 3.0E-32 T 14-10-2018 IPR009928 Primosomal DnaI, N-terminal GYO_3148 cd8d7f211e34eb2c13a46d98be267bce 311 Pfam PF01695 IstB-like ATP binding protein 146 274 3.8E-12 T 14-10-2018 IPR002611 IstB-like ATP-binding protein GO:0005524 GYO_3148 cd8d7f211e34eb2c13a46d98be267bce 311 Gene3D G3DSA:3.40.50.300 108 302 8.5E-55 T 14-10-2018 GYO_3148 cd8d7f211e34eb2c13a46d98be267bce 311 SUPERFAMILY SSF52540 129 274 8.0E-21 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase GYO_4272 10902cca5694295793a8b4b8e9c859ec 456 PIRSF PIRSF002744 1 454 2.3E-144 T 14-10-2018 IPR026030 Purine-cytosine permease Fcy2/21/22 GO:0005215|GO:0016021|GO:0055085 GYO_4272 10902cca5694295793a8b4b8e9c859ec 456 Gene3D G3DSA:1.10.4160.10 6 451 3.9E-42 T 14-10-2018 IPR038271 Purine-cytosine permease superfamily GYO_4272 10902cca5694295793a8b4b8e9c859ec 456 Pfam PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin 10 428 4.7E-117 T 14-10-2018 IPR001248 Purine-cytosine permease GO:0016020|GO:0022857|GO:0055085 GYO_0494 b53298f435d7848f6425957b4909951e 193 Gene3D G3DSA:2.60.60.30 19 187 7.4E-71 T 14-10-2018 GYO_0494 b53298f435d7848f6425957b4909951e 193 Pfam PF02342 TerD domain 1 188 1.1E-83 T 14-10-2018 IPR003325 TerD domain GYO_2924 e04e36ec275d1796fb055060ccef53c9 118 Gene3D G3DSA:2.30.30.40 30 106 2.9E-9 T 14-10-2018 GYO_2924 e04e36ec275d1796fb055060ccef53c9 118 SMART SM00287 30 104 1.2E-13 T 14-10-2018 IPR003646 SH3-like domain, bacterial-type GYO_4353 aa1667e7df30900e7055864438aac3de 370 PIRSF PIRSF019466 1 370 3.4E-159 T 14-10-2018 IPR007441 Ethanolamine utilisation protein EutH GO:0016021|GO:0034228|GO:0034229 GYO_4353 aa1667e7df30900e7055864438aac3de 370 Pfam PF04346 Ethanolamine utilisation protein, EutH 3 353 1.1E-137 T 14-10-2018 IPR007441 Ethanolamine utilisation protein EutH GO:0016021|GO:0034228|GO:0034229 GYO_4339 d5198778c563b0783dca334db51f1dd3 457 Gene3D G3DSA:2.40.128.10 364 457 1.1E-34 T 14-10-2018 GYO_4339 d5198778c563b0783dca334db51f1dd3 457 Pfam PF04616 Glycosyl hydrolases family 43 20 348 5.0E-32 T 14-10-2018 IPR006710 Glycoside hydrolase, family 43 GO:0004553|GO:0005975 GYO_4339 d5198778c563b0783dca334db51f1dd3 457 SUPERFAMILY SSF75005 7 349 7.85E-63 T 14-10-2018 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily GYO_4339 d5198778c563b0783dca334db51f1dd3 457 Gene3D G3DSA:2.115.10.20 27 351 4.6E-119 T 14-10-2018 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily GYO_4339 d5198778c563b0783dca334db51f1dd3 457 Pfam PF16369 C-terminal of Glycosyl hydrolases family 43 352 455 5.6E-36 T 14-10-2018 IPR032291 Extracellular endo-alpha-(1->5)-L-arabinanase, C-terminal GYO_4009 77de0a5bc83a05b872560fe4336e653b 396 Gene3D G3DSA:1.20.1250.20 7 384 4.3E-53 T 14-10-2018 GYO_4009 77de0a5bc83a05b872560fe4336e653b 396 SUPERFAMILY SSF103473 8 385 2.35E-62 T 14-10-2018 IPR036259 MFS transporter superfamily GYO_4009 77de0a5bc83a05b872560fe4336e653b 396 Pfam PF07690 Major Facilitator Superfamily 16 245 4.7E-31 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 GYO_3177 05a76bff55c6533086d45aa9231f3f24 113 Pfam PF14034 Sporulation protein YtrH 10 108 3.3E-40 T 14-10-2018 IPR025689 Sporulation protein YtrH GYO_1738 6c83dd890a6c4b37a661d7cff95f90a4 154 Pfam PF14177 YkyB-like protein 13 150 6.4E-70 T 14-10-2018 IPR025552 YkyB-like protein GYO_1974 4cf50b4fa6a49000fabc761113b0dc54 106 TIGRFAM TIGR00205 fliE: flagellar hook-basal body complex protein FliE 2 106 1.3E-41 T 14-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 GYO_1974 4cf50b4fa6a49000fabc761113b0dc54 106 Pfam PF02049 Flagellar hook-basal body complex protein FliE 20 106 2.4E-28 T 14-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 GYO_1974 4cf50b4fa6a49000fabc761113b0dc54 106 Hamap MF_00724 Flagellar hook-basal body complex protein FliE [fliE]. 3 106 19.063 T 14-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 GYO_1974 4cf50b4fa6a49000fabc761113b0dc54 106 PRINTS PR01006 Flagellar hook-basal body complex protein FliE signature 70 86 2.8E-18 T 14-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 GYO_1974 4cf50b4fa6a49000fabc761113b0dc54 106 PRINTS PR01006 Flagellar hook-basal body complex protein FliE signature 91 104 2.8E-18 T 14-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 GYO_1974 4cf50b4fa6a49000fabc761113b0dc54 106 PRINTS PR01006 Flagellar hook-basal body complex protein FliE signature 36 52 2.8E-18 T 14-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 GYO_3908 90b0ce5eb5cdc3f04bcef386cf0e7f4f 226 Pfam PF02706 Chain length determinant protein 4 79 1.8E-8 T 14-10-2018 IPR003856 Polysaccharide chain length determinant N-terminal domain GO:0009103|GO:0016020 GYO_1253 e29470d05362fd079a314424df572641 243 SUPERFAMILY SSF51695 3 235 4.97E-77 T 14-10-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily GO:0006629|GO:0008081 GYO_1253 e29470d05362fd079a314424df572641 243 Gene3D G3DSA:3.20.20.190 1 242 2.3E-83 T 14-10-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily GO:0006629|GO:0008081 GYO_1253 e29470d05362fd079a314424df572641 243 Pfam PF03009 Glycerophosphoryl diester phosphodiesterase family 6 232 1.3E-50 T 14-10-2018 IPR030395 Glycerophosphodiester phosphodiesterase domain GO:0006629|GO:0008081 GYO_4011 7cd854e6b7541feae38f3aa875525059 490 Pfam PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin 20 456 8.8E-157 T 14-10-2018 IPR001248 Purine-cytosine permease GO:0016020|GO:0022857|GO:0055085 GYO_4011 7cd854e6b7541feae38f3aa875525059 490 Gene3D G3DSA:1.10.4160.10 4 487 4.0E-138 T 14-10-2018 IPR038271 Purine-cytosine permease superfamily GYO_4011 7cd854e6b7541feae38f3aa875525059 490 TIGRFAM TIGR00800 ncs1: NCS1 nucleoside transporter family 15 451 1.9E-152 T 14-10-2018 IPR012681 Nucleobase cation symporter-1, NCS1 GO:0016020|GO:0022857|GO:0055085 GYO_0382 e9089a565be6726341dd6c015f1c7060 100 SMART SM00418 5 98 2.9E-14 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 GYO_0382 e9089a565be6726341dd6c015f1c7060 100 Pfam PF12840 Helix-turn-helix domain 5 77 5.7E-11 T 14-10-2018 GYO_0382 e9089a565be6726341dd6c015f1c7060 100 Gene3D G3DSA:1.10.10.10 1 100 1.7E-25 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily GYO_0382 e9089a565be6726341dd6c015f1c7060 100 SUPERFAMILY SSF46785 3 96 1.92E-20 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily GYO_2019 457fdc8672ed4b7ce4f90e8e0e895dea 171 Pfam PF11987 Translation-initiation factor 2 1 62 3.4E-23 T 14-10-2018 IPR023115 Translation initiation factor IF- 2, domain 3 GYO_2019 457fdc8672ed4b7ce4f90e8e0e895dea 171 SUPERFAMILY SSF52156 1 79 5.23E-28 T 14-10-2018 IPR036925 Translation initiation factor IF-2, domain 3 superfamily GYO_2019 457fdc8672ed4b7ce4f90e8e0e895dea 171 Gene3D G3DSA:3.40.50.10050 1 73 3.2E-27 T 14-10-2018 IPR036925 Translation initiation factor IF-2, domain 3 superfamily GYO_2019 457fdc8672ed4b7ce4f90e8e0e895dea 171 Gene3D G3DSA:2.40.30.10 74 171 4.3E-34 T 14-10-2018 GYO_2019 457fdc8672ed4b7ce4f90e8e0e895dea 171 ProSitePatterns PS01176 Initiation factor 2 signature. 123 145 - T 14-10-2018 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 Reactome: R-HSA-5368286 GYO_2019 457fdc8672ed4b7ce4f90e8e0e895dea 171 SUPERFAMILY SSF50447 73 170 4.64E-34 T 14-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily GYO_3430 eb153e4a4323efeb04941353fc7e2c63 273 PRINTS PR00412 Epoxide hydrolase signature 216 232 1.1E-6 T 14-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 GYO_3430 eb153e4a4323efeb04941353fc7e2c63 273 PRINTS PR00412 Epoxide hydrolase signature 34 52 1.1E-6 T 14-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 GYO_3430 eb153e4a4323efeb04941353fc7e2c63 273 PRINTS PR00412 Epoxide hydrolase signature 249 271 1.1E-6 T 14-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 GYO_3430 eb153e4a4323efeb04941353fc7e2c63 273 Gene3D G3DSA:3.40.50.1820 1 273 1.7E-65 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold GYO_3430 eb153e4a4323efeb04941353fc7e2c63 273 PRINTS PR00111 Alpha/beta hydrolase fold signature 53 68 2.7E-17 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 GYO_3430 eb153e4a4323efeb04941353fc7e2c63 273 PRINTS PR00111 Alpha/beta hydrolase fold signature 112 125 2.7E-17 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 GYO_3430 eb153e4a4323efeb04941353fc7e2c63 273 PRINTS PR00111 Alpha/beta hydrolase fold signature 218 232 2.7E-17 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 GYO_3430 eb153e4a4323efeb04941353fc7e2c63 273 PRINTS PR00111 Alpha/beta hydrolase fold signature 98 111 2.7E-17 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 GYO_3430 eb153e4a4323efeb04941353fc7e2c63 273 Pfam PF00561 alpha/beta hydrolase fold 29 136 2.0E-22 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 GYO_3430 eb153e4a4323efeb04941353fc7e2c63 273 SUPERFAMILY SSF53474 7 273 7.37E-63 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold GYO_1897 66fe4b00344d24bc7ced46235c75b6b0 435 ProSitePatterns PS01116 Xanthine/uracil permeases family signature. 340 360 - T 14-10-2018 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 Reactome: R-HSA-196836 GYO_1897 66fe4b00344d24bc7ced46235c75b6b0 435 Pfam PF00860 Permease family 18 393 4.6E-118 T 14-10-2018 IPR006043 Xanthine/uracil/vitamin C permease GO:0016020|GO:0022857|GO:0055085 GYO_1897 66fe4b00344d24bc7ced46235c75b6b0 435 TIGRFAM TIGR00801 ncs2: uracil-xanthine permease 16 418 2.1E-139 T 14-10-2018 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 Reactome: R-HSA-196836 GYO_3490 fc3cf2db396fb1c8e9956d46f6f50b4f 398 Pfam PF00425 chorismate binding enzyme 125 385 2.1E-78 T 14-10-2018 IPR015890 Chorismate-utilising enzyme, C-terminal GYO_3490 fc3cf2db396fb1c8e9956d46f6f50b4f 398 TIGRFAM TIGR00543 isochor_syn: isochorismate synthase 105 392 2.3E-89 T 14-10-2018 IPR004561 Isochorismate synthase GO:0008909|GO:0009058 KEGG: 00130+5.4.4.2|MetaCyc: PWY-5837|MetaCyc: PWY-5901|MetaCyc: PWY-6406 GYO_3490 fc3cf2db396fb1c8e9956d46f6f50b4f 398 Gene3D G3DSA:3.60.120.10 4 398 4.7E-139 T 14-10-2018 IPR005801 ADC synthase GO:0009058 GYO_3490 fc3cf2db396fb1c8e9956d46f6f50b4f 398 SUPERFAMILY SSF56322 40 395 5.63E-94 T 14-10-2018 IPR005801 ADC synthase GO:0009058 GYO_2052 849a87241b573bca23bf54d5366520bc 86 Pfam PF04232 Stage V sporulation protein S (SpoVS) 2 84 2.2E-40 T 14-10-2018 IPR007347 Sporulation stage V, protein S GYO_2052 849a87241b573bca23bf54d5366520bc 86 Gene3D G3DSA:3.30.110.20 1 86 8.6E-37 T 14-10-2018 IPR036882 Alba-like domain superfamily GO:0003676 GYO_2052 849a87241b573bca23bf54d5366520bc 86 ProDom PD061837 SPORULATION V STAGE S SPOVS-RELATED SPOVS CELL SEPTATION SPOVS3 RELATED 3 86 8.0E-33 T 14-10-2018 IPR007347 Sporulation stage V, protein S GYO_1470 ef8bca7670211183e2ce1b0580199b2c 235 Pfam PF03070 TENA/THI-4/PQQC family 10 214 5.9E-65 T 14-10-2018 IPR004305 Thiaminase-2/PQQC GYO_1470 ef8bca7670211183e2ce1b0580199b2c 235 Gene3D G3DSA:1.20.910.10 1 220 1.3E-66 T 14-10-2018 IPR016084 Haem oxygenase-like, multi-helical Reactome: R-HSA-189483|Reactome: R-HSA-917937 GYO_1470 ef8bca7670211183e2ce1b0580199b2c 235 SUPERFAMILY SSF48613 2 226 3.5E-74 T 14-10-2018 IPR016084 Haem oxygenase-like, multi-helical Reactome: R-HSA-189483|Reactome: R-HSA-917937 GYO_1470 ef8bca7670211183e2ce1b0580199b2c 235 TIGRFAM TIGR04306 salvage_TenA: thiaminase II 11 215 1.9E-95 T 14-10-2018 IPR027574 Thiaminase II GO:0006772|GO:0050334 KEGG: 00730+3.5.99.2|MetaCyc: PWY-6899|MetaCyc: PWY-7356 GYO_0363 dd5fc319a675c405503bfa561baae822 160 Pfam PF00583 Acetyltransferase (GNAT) family 30 139 6.7E-6 T 14-10-2018 IPR000182 GNAT domain GYO_0363 dd5fc319a675c405503bfa561baae822 160 Gene3D G3DSA:3.40.630.30 1 155 1.2E-14 T 14-10-2018 GYO_0363 dd5fc319a675c405503bfa561baae822 160 SUPERFAMILY SSF55729 4 147 5.51E-16 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase GYO_3958 bb05024e2ce7decf47bdda6a98240fc0 175 Pfam PF02525 Flavodoxin-like fold 1 166 9.3E-46 T 14-10-2018 IPR003680 Flavodoxin-like fold GYO_3958 bb05024e2ce7decf47bdda6a98240fc0 175 SUPERFAMILY SSF52218 1 174 3.39E-48 T 14-10-2018 IPR029039 Flavoprotein-like superfamily GYO_3958 bb05024e2ce7decf47bdda6a98240fc0 175 Gene3D G3DSA:3.40.50.360 1 174 3.5E-56 T 14-10-2018 IPR029039 Flavoprotein-like superfamily GYO_1581 817bf83f82ab164d982938ae96c0af8d 148 Pfam PF08890 Phage XkdN-like tail assembly chaperone protein, TAC 12 147 2.8E-39 T 14-10-2018 IPR014986 Clostridium phage phiCD119, XkdN GYO_1581 817bf83f82ab164d982938ae96c0af8d 148 Gene3D G3DSA:3.30.2220.30 16 136 9.4E-49 T 14-10-2018 IPR038559 Clostridium phage phiCD119, XkdN superfamily GYO_4183 36cf996527656180158dfc38af53fc62 105 Pfam PF17261 Family of unknown function (DUF5327) 1 105 1.1E-26 T 14-10-2018 IPR035218 Protein of unknown function DUF5327 GYO_4183 36cf996527656180158dfc38af53fc62 105 ProDom PD705231 YWDI GROUP-SPECIFIC 1 105 8.0E-41 T 14-10-2018 IPR035218 Protein of unknown function DUF5327 GYO_1102 9814b28b25b4ba57633a252a5c75664f 383 Gene3D G3DSA:3.40.1710.10 39 118 4.9E-7 T 14-10-2018 GYO_1102 9814b28b25b4ba57633a252a5c75664f 383 Pfam PF12698 ABC-2 family transporter protein 23 378 2.4E-40 T 14-10-2018 GYO_1770 cd9c946728c0d37d87be5d1f82360c46 231 Pfam PF04893 Yip1 domain 21 216 1.1E-24 T 14-10-2018 IPR006977 Yip1 domain GO:0016020 GYO_3170 45fa916884ee6a2aab9afbdc9cfe1e5a 127 Pfam PF04186 FxsA cytoplasmic membrane protein 6 112 1.9E-33 T 14-10-2018 IPR007313 FxsA cytoplasmic membrane protein GO:0016020 GYO_2320 a0f080dccec7088ee116995c287414d3 370 Pfam PF07730 Histidine kinase 179 242 1.5E-20 T 14-10-2018 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 GYO_2320 a0f080dccec7088ee116995c287414d3 370 SUPERFAMILY SSF55874 251 366 1.01E-10 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily GYO_2320 a0f080dccec7088ee116995c287414d3 370 Gene3D G3DSA:3.30.565.10 243 370 3.3E-34 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily GYO_0357 d9b3ff10ecec8fdb4724b064c19f04a4 414 PIRSF PIRSF016719 1 414 1.2E-186 T 14-10-2018 IPR008302 Uncharacterised conserved protein UCP016719 GYO_0357 d9b3ff10ecec8fdb4724b064c19f04a4 414 Pfam PF07075 Protein of unknown function (DUF1343) 57 414 4.8E-153 T 14-10-2018 IPR008302 Uncharacterised conserved protein UCP016719 GYO_0357 d9b3ff10ecec8fdb4724b064c19f04a4 414 Gene3D G3DSA:3.40.50.12170 39 414 4.3E-159 T 14-10-2018 GYO_0357 d9b3ff10ecec8fdb4724b064c19f04a4 414 Gene3D G3DSA:3.90.1150.140 252 399 4.3E-159 T 14-10-2018 GYO_3135 180807907772772ecdfed1bb64d0d1f6 89 Pfam PF06961 Protein of unknown function (DUF1294) 11 65 7.0E-25 T 14-10-2018 IPR010718 Protein of unknown function DUF1294 GYO_4231 1ad631c9ca07556bb9fbac3e969c71cc 65 TIGRFAM TIGR03833 TIGR03833: conserved hypothetical protein 2 62 3.2E-34 T 14-10-2018 IPR019240 Protein of unknown function DUF2196 GYO_4231 1ad631c9ca07556bb9fbac3e969c71cc 65 Pfam PF09962 Uncharacterized conserved protein (DUF2196) 2 62 8.2E-32 T 14-10-2018 IPR019240 Protein of unknown function DUF2196 GYO_3734 e9e8bf04afbfe107d368ca484bad8696 238 Hamap MF_02105 Lactate utilization protein A [lutA]. 1 238 64.659 T 14-10-2018 IPR022822 Lactate utilization protein A GO:0006089 GYO_3734 e9e8bf04afbfe107d368ca484bad8696 238 Pfam PF02754 Cysteine-rich domain 3 84 1.9E-17 T 14-10-2018 IPR004017 Cysteine-rich domain GYO_3734 e9e8bf04afbfe107d368ca484bad8696 238 Pfam PF02754 Cysteine-rich domain 132 215 1.7E-15 T 14-10-2018 IPR004017 Cysteine-rich domain GYO_4341 fa3a4b0771725f2f30743f11121d1282 148 Pfam PF09021 HutP 9 146 6.3E-36 T 14-10-2018 IPR015111 Hut operon regulatory protein HutP GYO_4341 fa3a4b0771725f2f30743f11121d1282 148 Gene3D G3DSA:3.40.1510.10 2 148 1.1E-68 T 14-10-2018 IPR036482 Hut operon regulatory protein HutP superfamily GYO_4341 fa3a4b0771725f2f30743f11121d1282 148 Hamap MF_00779 Hut operon positive regulatory protein [hutP]. 1 148 46.361 T 14-10-2018 IPR023552 Hut operon regulatory protein HutP, bacillales GYO_4341 fa3a4b0771725f2f30743f11121d1282 148 SUPERFAMILY SSF111064 7 148 1.18E-62 T 14-10-2018 IPR036482 Hut operon regulatory protein HutP superfamily GYO_1199 489730f6ebb285037608227b0c084a98 276 Gene3D G3DSA:3.40.190.10 30 252 5.5E-63 T 14-10-2018 GYO_1199 489730f6ebb285037608227b0c084a98 276 SUPERFAMILY SSF53850 28 269 1.98E-57 T 14-10-2018 GYO_1199 489730f6ebb285037608227b0c084a98 276 Gene3D G3DSA:3.40.190.10 106 213 5.5E-63 T 14-10-2018 GYO_1199 489730f6ebb285037608227b0c084a98 276 Pfam PF03180 NLPA lipoprotein 29 261 4.9E-71 T 14-10-2018 IPR004872 Lipoprotein NlpA family GYO_2577 c16c2640a11c5a95bb4c484f3c8eadc6 141 ProDom PD086170 SPORULATION AB V STAGE MEMBRANE SPOVAB TRANSMEMBRANE 27 138 5.0E-57 T 14-10-2018 IPR020144 Stage V sporulation protein AB GYO_2577 c16c2640a11c5a95bb4c484f3c8eadc6 141 Pfam PF13782 Stage V sporulation protein AB 27 135 1.1E-33 T 14-10-2018 IPR020144 Stage V sporulation protein AB GYO_2983 38408a3e799ff0f8fae2bb20be92deeb 353 Pfam PF01594 AI-2E family transporter 20 345 1.8E-87 T 14-10-2018 IPR002549 Transmembrane protein TqsA-like GYO_1516 37ab63cff1e6a72980132b64c5847a70 157 Pfam PF10901 Protein of unknown function (DUF2690) 31 140 9.9E-34 T 14-10-2018 IPR021224 Protein of unknown function DUF2690 GYO_2046 f4b831466af228783998bbb4541013c6 193 TIGRFAM TIGR00560 pgsA: CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase 2 191 2.0E-70 T 14-10-2018 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase GO:0008444|GO:0008654|GO:0016021 KEGG: 00564+2.7.8.5|MetaCyc: PWY-5269|MetaCyc: PWY-5668|MetaCyc: PWY-7817 GYO_2046 f4b831466af228783998bbb4541013c6 193 ProSitePatterns PS00379 CDP-alcohol phosphatidyltransferases signature. 60 82 - T 14-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 GYO_2046 f4b831466af228783998bbb4541013c6 193 Pfam PF01066 CDP-alcohol phosphatidyltransferase 3 82 1.5E-18 T 14-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 GYO_2046 f4b831466af228783998bbb4541013c6 193 PIRSF PIRSF000847 1 193 3.1E-53 T 14-10-2018 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase GO:0008444|GO:0008654|GO:0016021 KEGG: 00564+2.7.8.5|MetaCyc: PWY-5269|MetaCyc: PWY-5668|MetaCyc: PWY-7817 GYO_2046 f4b831466af228783998bbb4541013c6 193 Gene3D G3DSA:1.20.120.1760 4 185 2.0E-10 T 14-10-2018 GYO_4268 80bc5e03d1d2f3be62b447d36c48bde3 62 Pfam PF13396 Phospholipase_D-nuclease N-terminal 17 59 3.3E-13 T 14-10-2018 IPR027379 Cardiolipin synthase N-terminal GYO_3264 1c451a24b6a8c7e20e2e487c46550c78 293 SUPERFAMILY SSF161098 9 293 7.85E-62 T 14-10-2018 IPR035906 MetI-like superfamily GYO_3264 1c451a24b6a8c7e20e2e487c46550c78 293 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 92 285 1.3E-20 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 GYO_3264 1c451a24b6a8c7e20e2e487c46550c78 293 Gene3D G3DSA:1.10.3720.10 3 284 4.1E-73 T 14-10-2018 IPR035906 MetI-like superfamily GYO_3043 db1a373a6510cbdc479a06ac04b922ac 172 Pfam PF04093 rod shape-determining protein MreD 2 164 3.7E-45 T 14-10-2018 IPR007227 Cell shape-determining protein MreD GO:0008360|GO:0016021 GYO_3043 db1a373a6510cbdc479a06ac04b922ac 172 TIGRFAM TIGR03426 shape_MreD: rod shape-determining protein MreD 7 159 1.6E-25 T 14-10-2018 IPR007227 Cell shape-determining protein MreD GO:0008360|GO:0016021 GYO_3128 a4d3e36caf0b3f83fe2d9a9ebd94045f 229 Gene3D G3DSA:3.40.225.10 1 228 9.8E-62 T 14-10-2018 IPR036409 Class II aldolase/adducin N-terminal domain superfamily GYO_3128 a4d3e36caf0b3f83fe2d9a9ebd94045f 229 Pfam PF00596 Class II Aldolase and Adducin N-terminal domain 8 194 9.7E-49 T 14-10-2018 IPR001303 Class II aldolase/adducin N-terminal GYO_3128 a4d3e36caf0b3f83fe2d9a9ebd94045f 229 TIGRFAM TIGR00760 araD: L-ribulose-5-phosphate 4-epimerase 1 228 3.3E-133 T 14-10-2018 IPR004661 L-ribulose-5-phosphate 4-epimerase GO:0008270|GO:0008742|GO:0019572 KEGG: 00040+5.1.3.4|KEGG: 00053+5.1.3.4|MetaCyc: PWY-6961 GYO_3128 a4d3e36caf0b3f83fe2d9a9ebd94045f 229 SUPERFAMILY SSF53639 1 220 3.34E-68 T 14-10-2018 IPR036409 Class II aldolase/adducin N-terminal domain superfamily GYO_3128 a4d3e36caf0b3f83fe2d9a9ebd94045f 229 SMART SM01007 7 195 4.2E-64 T 14-10-2018 IPR001303 Class II aldolase/adducin N-terminal GYO_3747 979b29c1d66d0c2faa3f4bf45bcd99c1 418 SUPERFAMILY SSF160964 72 171 4.58E-8 T 14-10-2018 GYO_3747 979b29c1d66d0c2faa3f4bf45bcd99c1 418 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 202 407 4.5E-22 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 GYO_3747 979b29c1d66d0c2faa3f4bf45bcd99c1 418 SUPERFAMILY SSF161098 167 402 1.57E-52 T 14-10-2018 IPR035906 MetI-like superfamily GYO_3747 979b29c1d66d0c2faa3f4bf45bcd99c1 418 Gene3D G3DSA:1.10.3720.10 163 418 1.6E-63 T 14-10-2018 IPR035906 MetI-like superfamily GYO_3668 74863e4219aa100a1f649b2a6e6ac0a6 632 Pfam PF13515 Fusaric acid resistance protein-like 355 480 2.7E-19 T 14-10-2018 GYO_3437 6127cf4a13df928095df760ca3f10fb6 392 Pfam PF07690 Major Facilitator Superfamily 1 255 5.4E-30 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 GYO_3437 6127cf4a13df928095df760ca3f10fb6 392 SUPERFAMILY SSF103473 1 385 2.09E-65 T 14-10-2018 IPR036259 MFS transporter superfamily GYO_3437 6127cf4a13df928095df760ca3f10fb6 392 PRINTS PR01035 Tetracycline resistance protein signature 126 148 1.1E-6 T 14-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 GYO_3437 6127cf4a13df928095df760ca3f10fb6 392 PRINTS PR01035 Tetracycline resistance protein signature 38 57 1.1E-6 T 14-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 GYO_3437 6127cf4a13df928095df760ca3f10fb6 392 PRINTS PR01035 Tetracycline resistance protein signature 331 354 1.1E-6 T 14-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 GYO_3437 6127cf4a13df928095df760ca3f10fb6 392 PRINTS PR01035 Tetracycline resistance protein signature 69 93 1.1E-6 T 14-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 GYO_3437 6127cf4a13df928095df760ca3f10fb6 392 Gene3D G3DSA:1.20.1250.20 1 189 1.2E-30 T 14-10-2018 GYO_3437 6127cf4a13df928095df760ca3f10fb6 392 Gene3D G3DSA:1.20.1250.20 204 391 3.2E-26 T 14-10-2018 GYO_2801 456cc76a0c34fd0e08b8544184401d1f 319 Pfam PF02562 PhoH-like protein 113 316 1.8E-95 T 14-10-2018 IPR003714 PhoH-like protein GO:0005524 GYO_2801 456cc76a0c34fd0e08b8544184401d1f 319 Gene3D G3DSA:3.40.50.300 110 316 3.1E-77 T 14-10-2018 GYO_2801 456cc76a0c34fd0e08b8544184401d1f 319 SUPERFAMILY SSF52540 61 279 3.11E-40 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase GYO_3195 c021a4a2331c00dc7f23639db016eeeb 153 TIGRFAM TIGR02874 spore_ytfJ: sporulation protein YtfJ 3 134 2.3E-60 T 14-10-2018 IPR014229 Sporulation protein YtfJ GYO_3195 c021a4a2331c00dc7f23639db016eeeb 153 Pfam PF09579 Sporulation protein YtfJ (Spore_YtfJ) 31 123 1.5E-28 T 14-10-2018 IPR014229 Sporulation protein YtfJ GYO_3195 c021a4a2331c00dc7f23639db016eeeb 153 PIRSF PIRSF021377 1 153 2.6E-63 T 14-10-2018 IPR014229 Sporulation protein YtfJ GYO_0532 1de5fb9742fc68541ce1212de7d6877a 284 PRINTS PR00111 Alpha/beta hydrolase fold signature 92 105 2.8E-6 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 GYO_0532 1de5fb9742fc68541ce1212de7d6877a 284 PRINTS PR00111 Alpha/beta hydrolase fold signature 49 64 2.8E-6 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 GYO_0532 1de5fb9742fc68541ce1212de7d6877a 284 PRINTS PR00111 Alpha/beta hydrolase fold signature 106 119 2.8E-6 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 GYO_0532 1de5fb9742fc68541ce1212de7d6877a 284 Pfam PF00561 alpha/beta hydrolase fold 26 129 9.2E-13 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 GYO_0532 1de5fb9742fc68541ce1212de7d6877a 284 SUPERFAMILY SSF53474 5 283 6.81E-40 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold GYO_0532 1de5fb9742fc68541ce1212de7d6877a 284 Gene3D G3DSA:3.40.50.1820 1 284 8.1E-49 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold GYO_3657 e69aa0a1eb037b53d13d427c5a38e73a 774 SUPERFAMILY SSF52540 205 771 1.98E-60 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase GYO_3657 e69aa0a1eb037b53d13d427c5a38e73a 774 Pfam PF00580 UvrD/REP helicase N-terminal domain 391 580 8.5E-9 T 14-10-2018 IPR034739 UvrD/AddA helicase, N-terminal GO:0005524 GYO_3657 e69aa0a1eb037b53d13d427c5a38e73a 774 Pfam PF13538 UvrD-like helicase C-terminal domain 704 752 1.8E-10 T 14-10-2018 IPR027785 UvrD-like helicase C-terminal domain GYO_3657 e69aa0a1eb037b53d13d427c5a38e73a 774 Gene3D G3DSA:3.40.50.300 203 269 2.6E-8 T 14-10-2018 GYO_3657 e69aa0a1eb037b53d13d427c5a38e73a 774 Gene3D G3DSA:3.40.50.300 604 774 3.0E-59 T 14-10-2018 GYO_3377 412e04493ed79e89ea7bd9228a5fc319 192 TIGRFAM TIGR02357 ECF_ThiT_YuaJ: energy-coupled thiamine transporter ThiT 8 189 1.4E-70 T 14-10-2018 IPR012651 Thiamine transporter ThiT GO:0005886|GO:0015234|GO:0015888 GYO_3377 412e04493ed79e89ea7bd9228a5fc319 192 Gene3D G3DSA:1.10.1760.20 4 189 2.1E-60 T 14-10-2018 GYO_3377 412e04493ed79e89ea7bd9228a5fc319 192 Pfam PF09515 Thiamine transporter protein (Thia_YuaJ) 10 187 1.3E-62 T 14-10-2018 IPR012651 Thiamine transporter ThiT GO:0005886|GO:0015234|GO:0015888 GYO_3590 75aa00a60cf0200fc817cec095215bb8 110 Pfam PF07875 Coat F domain 22 84 2.8E-22 T 14-10-2018 IPR012851 Spore coat protein CotF-like GYO_2745 834ed860bbc4c2f2b40298951958268c 104 TIGRFAM TIGR00106 TIGR00106: uncharacterized protein, MTH1187 family 2 101 1.6E-39 T 14-10-2018 IPR002767 Thiamine-binding protein GYO_2745 834ed860bbc4c2f2b40298951958268c 104 SUPERFAMILY SSF89957 1 103 1.03E-32 T 14-10-2018 IPR029756 MTH1187/YkoF-like GYO_2745 834ed860bbc4c2f2b40298951958268c 104 Gene3D G3DSA:3.30.70.930 1 104 2.3E-40 T 14-10-2018 IPR029756 MTH1187/YkoF-like GYO_2745 834ed860bbc4c2f2b40298951958268c 104 Pfam PF01910 Thiamine-binding protein 4 98 1.3E-34 T 14-10-2018 IPR002767 Thiamine-binding protein GYO_3193 f932ffa3c3424f3cc1ef5f8ba2cf433c 328 Pfam PF02384 N-6 DNA Methylase 97 306 1.7E-15 T 14-10-2018 IPR003356 DNA methylase, adenine-specific GO:0003677|GO:0006306|GO:0008170 GYO_3193 f932ffa3c3424f3cc1ef5f8ba2cf433c 328 Gene3D G3DSA:1.10.150.470 1 85 4.0E-22 T 14-10-2018 GYO_3193 f932ffa3c3424f3cc1ef5f8ba2cf433c 328 Gene3D G3DSA:3.40.50.150 88 328 1.1E-57 T 14-10-2018 GYO_3193 f932ffa3c3424f3cc1ef5f8ba2cf433c 328 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 217 241 2.2E-6 T 14-10-2018 GYO_3193 f932ffa3c3424f3cc1ef5f8ba2cf433c 328 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 121 135 2.2E-6 T 14-10-2018 GYO_3193 f932ffa3c3424f3cc1ef5f8ba2cf433c 328 PIRSF PIRSF026567 1 328 2.1E-143 T 14-10-2018 IPR016843 S-adenosyl-L-methionine dependent adenine methyltransferase, bacteria, predicted GYO_3193 f932ffa3c3424f3cc1ef5f8ba2cf433c 328 SUPERFAMILY SSF53335 40 311 2.09E-47 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase GYO_2049 070684e5470ae1adba4bbc4580a70fd6 391 Pfam PF00144 Beta-lactamase 97 380 1.3E-54 T 14-10-2018 IPR001466 Beta-lactamase-related GYO_2049 070684e5470ae1adba4bbc4580a70fd6 391 Gene3D G3DSA:3.40.710.10 81 384 7.1E-75 T 14-10-2018 GYO_2049 070684e5470ae1adba4bbc4580a70fd6 391 SUPERFAMILY SSF56601 84 374 1.67E-76 T 14-10-2018 IPR012338 Beta-lactamase/transpeptidase-like GYO_3570 078b9c5d1286d1f85e6df79770e28196 437 Pfam PF01458 Uncharacterized protein family (UPF0051) 186 411 8.6E-62 T 14-10-2018 IPR000825 SUF system FeS cluster assembly, SufBD GO:0016226 GYO_3570 078b9c5d1286d1f85e6df79770e28196 437 SUPERFAMILY SSF101960 13 436 3.53E-119 T 14-10-2018 IPR037284 SUF system FeS cluster assembly, SufBD superfamily GYO_3570 078b9c5d1286d1f85e6df79770e28196 437 TIGRFAM TIGR01981 sufD: FeS assembly protein SufD 152 428 1.1E-73 T 14-10-2018 IPR011542 SUF system FeS cluster assembly, SufD GO:0016226 GYO_0743 e1f41700473ee7f4690ad97ec66b1e7b 166 Pfam PF02517 CAAX protease self-immunity 59 151 4.7E-14 T 14-10-2018 IPR003675 CAAX amino terminal protease GO:0016020 Reactome: R-HSA-5689880 GYO_2918 d0510f1308892ac62cf4d0d83e320c25 249 Pfam PF09223 ZinT (YodA) periplasmic lipocalin-like zinc-recruitment 71 249 9.7E-85 T 14-10-2018 IPR015304 ZinT domain GO:0008270 GYO_2918 d0510f1308892ac62cf4d0d83e320c25 249 SUPERFAMILY SSF50814 65 249 2.26E-83 T 14-10-2018 IPR012674 Calycin GYO_2918 d0510f1308892ac62cf4d0d83e320c25 249 Gene3D G3DSA:2.40.128.20 63 249 1.6E-82 T 14-10-2018 IPR012674 Calycin GYO_3792 2d66f9ed58e4480d698d65ea466fc3be 293 Pfam PF06691 Protein of unknown function (DUF1189) 57 253 1.5E-16 T 14-10-2018 IPR009574 Protein of unknown function DUF1189 GYO_3529 4d6dce6a5147ebfb37606e08a73cb12b 101 Gene3D G3DSA:3.30.1980.10 1 100 3.6E-23 T 14-10-2018 IPR036493 Hypothetical protein YunC superfamily GYO_3529 4d6dce6a5147ebfb37606e08a73cb12b 101 SUPERFAMILY SSF102891 2 99 1.57E-34 T 14-10-2018 IPR036493 Hypothetical protein YunC superfamily GYO_3529 4d6dce6a5147ebfb37606e08a73cb12b 101 Pfam PF08827 Domain of unknown function (DUF1805) 37 99 2.8E-24 T 14-10-2018 IPR014931 Protein of unknown function DUF1805 GYO_2308 26f64c56b2a249be25b0e5248edcef99 160 SUPERFAMILY SSF55136 8 158 2.62E-16 T 14-10-2018 IPR011256 Regulatory factor, effector binding domain superfamily GYO_2308 26f64c56b2a249be25b0e5248edcef99 160 Gene3D G3DSA:3.20.80.10 1 158 4.7E-35 T 14-10-2018 IPR011256 Regulatory factor, effector binding domain superfamily GYO_2308 26f64c56b2a249be25b0e5248edcef99 160 SMART SM00871 2 158 5.3E-18 T 14-10-2018 IPR010499 Bacterial transcription activator, effector binding GYO_2308 26f64c56b2a249be25b0e5248edcef99 160 Pfam PF06445 GyrI-like small molecule binding domain 6 158 2.5E-23 T 14-10-2018 IPR029442 GyrI-like small molecule binding domain GYO_2085 5260131a097ae22abad23686ad7a0629 235 Pfam PF05908 Poly-gamma-glutamate hydrolase 36 225 1.3E-72 T 14-10-2018 IPR008585 Poly-gamma-glutamate hydrolase GYO_2085 5260131a097ae22abad23686ad7a0629 235 Gene3D G3DSA:3.40.630.100 31 235 1.5E-60 T 14-10-2018 IPR038128 Poly-gamma-glutamate hydrolase superfamily GYO_3804 b8fc8c2d8069043e9548979c38a3c73f 259 SMART SM00382 34 222 4.2E-14 T 14-10-2018 IPR003593 AAA+ ATPase domain GYO_3804 b8fc8c2d8069043e9548979c38a3c73f 259 Gene3D G3DSA:3.40.50.300 1 251 8.2E-67 T 14-10-2018 GYO_3804 b8fc8c2d8069043e9548979c38a3c73f 259 SUPERFAMILY SSF52540 3 226 3.3E-66 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase GYO_3804 b8fc8c2d8069043e9548979c38a3c73f 259 Pfam PF00005 ABC transporter 25 173 1.4E-31 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 GYO_1021 e376589e14b1b6d9dcddb271fe302fde 478 Pfam PF00939 Sodium:sulfate symporter transmembrane region 14 478 9.2E-184 T 14-10-2018 IPR001898 Solute carrier family 13 GO:0005215|GO:0006814|GO:0016020|GO:0055085 Reactome: R-HSA-433137 GYO_1021 e376589e14b1b6d9dcddb271fe302fde 478 TIGRFAM TIGR00785 dass: transporter, divalent anion:Na+ symporter (DASS) family 32 472 7.9E-136 T 14-10-2018 IPR001898 Solute carrier family 13 GO:0005215|GO:0006814|GO:0016020|GO:0055085 Reactome: R-HSA-433137 GYO_1021 e376589e14b1b6d9dcddb271fe302fde 478 PIRSF PIRSF002457 1 478 1.9E-171 T 14-10-2018 IPR030676 Citrate carrier CitT-related GYO_2709 ee5ed5044096da88ed060525dbc440d1 318 ProDom PD131510 MEMBRANE METAL-DEPENDENT ENZYME YQHQ SPANNING SIMILAR LIPOPROTEIN LIPOPROTEIN PROTEIN HYP001 57 296 4.0E-131 T 14-10-2018 IPR010787 Protein of unknown function DUF1385 GYO_2709 ee5ed5044096da88ed060525dbc440d1 318 Pfam PF07136 Protein of unknown function (DUF1385) 57 301 1.4E-77 T 14-10-2018 IPR010787 Protein of unknown function DUF1385 GYO_3168 ee53045d7f876ff3af1d68c2c1a33e68 371 Pfam PF01594 AI-2E family transporter 14 356 3.1E-85 T 14-10-2018 IPR002549 Transmembrane protein TqsA-like GYO_3168 ee53045d7f876ff3af1d68c2c1a33e68 371 TIGRFAM TIGR02872 spore_ytvI: sporulation integral membrane protein YtvI 11 359 7.5E-124 T 14-10-2018 IPR014227 Putative transport protein YtvI-like GYO_2521 d28db4c20c87b78670b70c0c2ac2d125 58 ProDom PD052359 YPFB 1 57 8.0E-16 T 14-10-2018 IPR035281 Protein of unknown function DUF5359 GYO_2521 d28db4c20c87b78670b70c0c2ac2d125 58 Pfam PF17313 Family of unknown function (DUF5359) 1 56 1.1E-24 T 14-10-2018 IPR035281 Protein of unknown function DUF5359 GYO_1314 cd132b3bf416b7bc509e25971957eccb 258 PIRSF PIRSF033101 1 258 3.5E-105 T 14-10-2018 IPR011397 Uncharacterised conserved protein UCP033101 GYO_1314 cd132b3bf416b7bc509e25971957eccb 258 Pfam PF10086 Putative membrane peptidase family (DUF2324) 17 239 3.2E-81 T 14-10-2018 IPR011397 Uncharacterised conserved protein UCP033101 GYO_4154 eb465a3a1c3c181f79bdbf16d0c5cb9d 259 Gene3D G3DSA:3.40.50.720 2 259 7.2E-72 T 14-10-2018 GYO_4154 eb465a3a1c3c181f79bdbf16d0c5cb9d 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 175 192 2.8E-26 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR GYO_4154 eb465a3a1c3c181f79bdbf16d0c5cb9d 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 154 173 2.8E-26 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR GYO_4154 eb465a3a1c3c181f79bdbf16d0c5cb9d 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 81 92 2.8E-26 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR GYO_4154 eb465a3a1c3c181f79bdbf16d0c5cb9d 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 219 239 2.8E-26 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR GYO_4154 eb465a3a1c3c181f79bdbf16d0c5cb9d 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 5 22 2.8E-26 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR GYO_4154 eb465a3a1c3c181f79bdbf16d0c5cb9d 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 128 144 2.8E-26 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR GYO_4154 eb465a3a1c3c181f79bdbf16d0c5cb9d 259 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 10 254 1.2E-41 T 14-10-2018 GYO_4154 eb465a3a1c3c181f79bdbf16d0c5cb9d 259 SUPERFAMILY SSF51735 3 255 3.82E-64 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily GYO_3008 0c2ee63bedc9470c41d50bf7127b27a5 218 Gene3D G3DSA:3.30.240.20 160 217 6.9E-17 T 14-10-2018 IPR023090 UPF0702, alpha/beta domain superfamily GYO_3008 0c2ee63bedc9470c41d50bf7127b27a5 218 Pfam PF04239 Protein of unknown function (DUF421) 89 193 3.7E-37 T 14-10-2018 IPR007353 Protein of unknown function DUF421 GYO_3008 0c2ee63bedc9470c41d50bf7127b27a5 218 Gene3D G3DSA:3.30.240.20 81 152 1.7E-24 T 14-10-2018 IPR023090 UPF0702, alpha/beta domain superfamily GYO_3956 898be92420701d4ac02011876e8760c1 178 Pfam PF08239 Bacterial SH3 domain 56 107 2.3E-10 T 14-10-2018 IPR003646 SH3-like domain, bacterial-type GYO_3956 898be92420701d4ac02011876e8760c1 178 SMART SM00287 47 111 2.9E-16 T 14-10-2018 IPR003646 SH3-like domain, bacterial-type GYO_3956 898be92420701d4ac02011876e8760c1 178 SMART SM00287 118 177 1.4E-6 T 14-10-2018 IPR003646 SH3-like domain, bacterial-type GYO_3956 898be92420701d4ac02011876e8760c1 178 Gene3D G3DSA:2.30.30.40 47 112 7.0E-14 T 14-10-2018 GYO_1136 42de01a191f9d108bb72244e1064fc26 176 Gene3D G3DSA:2.40.380.10 14 169 6.7E-12 T 14-10-2018 IPR035930 FomD-like superfamily GYO_1136 42de01a191f9d108bb72244e1064fc26 176 SUPERFAMILY SSF159234 3 171 5.62E-32 T 14-10-2018 IPR035930 FomD-like superfamily GYO_1136 42de01a191f9d108bb72244e1064fc26 176 PIRSF PIRSF028345 1 176 5.9E-79 T 14-10-2018 IPR016882 Uncharacterised protein family UPF0374 GYO_1136 42de01a191f9d108bb72244e1064fc26 176 Pfam PF04167 Protein of unknown function (DUF402) 60 124 2.5E-17 T 14-10-2018 IPR007295 Domain of unknown function DUF402 GYO_1136 42de01a191f9d108bb72244e1064fc26 176 Hamap MF_01568 UPF0374 protein . 1 175 49.358 T 14-10-2018 IPR016882 Uncharacterised protein family UPF0374 GYO_2773 bed126d79abd2ab34ea1df1039aacff9 193 PIRSF PIRSF021362 1 191 1.4E-94 T 14-10-2018 IPR009206 Nucleotidase, putative GYO_2773 bed126d79abd2ab34ea1df1039aacff9 193 SUPERFAMILY SSF56784 4 162 1.63E-20 T 14-10-2018 IPR036412 HAD-like superfamily GYO_2773 bed126d79abd2ab34ea1df1039aacff9 193 Gene3D G3DSA:3.40.50.1000 1 166 8.4E-14 T 14-10-2018 IPR023214 HAD superfamily GYO_3973 20ef066c3a25ada38ff95de4c50b69ef 761 SUPERFAMILY SSF48208 48 378 2.55E-26 T 14-10-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 GYO_3973 20ef066c3a25ada38ff95de4c50b69ef 761 Pfam PF16375 Domain of unknown function 527 588 4.7E-13 T 14-10-2018 IPR032275 Domain of unknown function DUF4986 GYO_3973 20ef066c3a25ada38ff95de4c50b69ef 761 Pfam PF07944 Beta-L-arabinofuranosidase, GH127 3 506 1.6E-156 T 14-10-2018 IPR012878 Beta-L-arabinofuranosidase, GH127 GYO_4300 5e5f61b9c283dd2473c1e5cf8b4fc8f4 403 Pfam PF01717 Cobalamin-independent synthase, Catalytic domain 51 378 2.5E-16 T 14-10-2018 IPR002629 Cobalamin-independent methionine synthase MetE, C-terminal/archaeal GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 GYO_4300 5e5f61b9c283dd2473c1e5cf8b4fc8f4 403 SUPERFAMILY SSF51726 48 403 2.62E-83 T 14-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 GYO_4300 5e5f61b9c283dd2473c1e5cf8b4fc8f4 403 Gene3D G3DSA:3.20.20.210 41 403 2.3E-128 T 14-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 GYO_3154 933b404f2a5964b80f42ddcaa73d574a 396 SUPERFAMILY SSF103473 8 390 8.24E-61 T 14-10-2018 IPR036259 MFS transporter superfamily GYO_3154 933b404f2a5964b80f42ddcaa73d574a 396 Pfam PF07690 Major Facilitator Superfamily 16 325 3.9E-41 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 GYO_3154 933b404f2a5964b80f42ddcaa73d574a 396 Gene3D G3DSA:1.20.1250.20 5 383 5.3E-48 T 14-10-2018 GYO_1277 b63b7de744f9b0184f06234528a6416c 165 Pfam PF02080 TrkA-C domain 90 155 9.9E-15 T 14-10-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 GYO_1277 b63b7de744f9b0184f06234528a6416c 165 PIRSF PIRSF005028 1 163 7.7E-60 T 14-10-2018 IPR026278 Potassium/proton antiporter subunit KhtT GYO_1277 b63b7de744f9b0184f06234528a6416c 165 SUPERFAMILY SSF116726 79 158 1.7E-17 T 14-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 GYO_1277 b63b7de744f9b0184f06234528a6416c 165 Gene3D G3DSA:3.30.70.1450 84 160 5.5E-19 T 14-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 GYO_0726 a89d70e6ad9d77aedc78b9757efe843c 210 Gene3D G3DSA:2.40.33.20 1 210 3.3E-66 T 14-10-2018 GYO_0726 a89d70e6ad9d77aedc78b9757efe843c 210 Pfam PF03473 MOSC domain 50 160 2.2E-19 T 14-10-2018 IPR005302 Molybdenum cofactor sulfurase, C-terminal GO:0003824|GO:0030151|GO:0030170 GYO_0726 a89d70e6ad9d77aedc78b9757efe843c 210 SUPERFAMILY SSF50800 3 210 4.76E-61 T 14-10-2018 IPR011037 Pyruvate kinase-like, insert domain superfamily GYO_0726 a89d70e6ad9d77aedc78b9757efe843c 210 Pfam PF03475 3-alpha domain 170 210 1.5E-8 T 14-10-2018 IPR005163 3-alpha domain GYO_2496 94c949cc4df53ac6ec13dcf52f4eeb0b 127 Gene3D G3DSA:3.30.1330.40 1 127 1.8E-54 T 14-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 GYO_2496 94c949cc4df53ac6ec13dcf52f4eeb0b 127 PIRSF PIRSF005965 1 125 6.7E-51 T 14-10-2018 IPR008243 Chorismate mutase, AroH class KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 GYO_2496 94c949cc4df53ac6ec13dcf52f4eeb0b 127 Pfam PF07736 Chorismate mutase type I 3 119 1.8E-47 T 14-10-2018 IPR008243 Chorismate mutase, AroH class KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 GYO_2496 94c949cc4df53ac6ec13dcf52f4eeb0b 127 ProDom PD031888 MUTASE CHORISMATE AROH THE CLASS ISOMERASE TRANSCRIPTION BIOSYNTHESIS CM 3D-STRUCTURE 9 127 3.0E-62 T 14-10-2018 IPR008243 Chorismate mutase, AroH class KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 GYO_2496 94c949cc4df53ac6ec13dcf52f4eeb0b 127 TIGRFAM TIGR01796 CM_mono_aroH: chorismate mutase 3 119 4.1E-47 T 14-10-2018 IPR008243 Chorismate mutase, AroH class KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 GYO_2496 94c949cc4df53ac6ec13dcf52f4eeb0b 127 SUPERFAMILY SSF55298 1 126 1.65E-49 T 14-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 GYO_1478 f5d886fce7bfba19c900cc65a71e1102 225 Pfam PF14153 Spore coat protein CotO 5 225 3.7E-68 T 14-10-2018 IPR025439 Spore coat protein CotO GYO_0516 affb9c1955089585da589a627f6dead7 198 Pfam PF09347 Domain of unknown function (DUF1989) 6 172 1.5E-55 T 14-10-2018 IPR018959 Protein of unknown function DUF1989 GYO_2372 7ec687ce3835fb12ad92c29af2140e1e 58 ProDom PD052277 YOZD 1 56 7.0E-24 T 14-10-2018 GYO_2372 7ec687ce3835fb12ad92c29af2140e1e 58 Pfam PF14162 YozD-like protein 1 57 8.0E-34 T 14-10-2018 IPR025545 YozD-like protein GYO_3454 f639f8f6c2bc6ea972e519e9f617c863 158 Pfam PF01899 Na+/H+ ion antiporter subunit 8 156 5.7E-44 T 14-10-2018 IPR002758 Na+/H+ antiporter subunit E GO:0006812|GO:0008324|GO:0016021 GYO_3454 f639f8f6c2bc6ea972e519e9f617c863 158 PIRSF PIRSF019239 1 158 2.1E-53 T 14-10-2018 IPR002758 Na+/H+ antiporter subunit E GO:0006812|GO:0008324|GO:0016021 GYO_0816 63bf84331c731989ed179c32694b4b0f 153 SMART SM00347 30 132 4.1E-26 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 GYO_0816 63bf84331c731989ed179c32694b4b0f 153 Gene3D G3DSA:1.10.10.10 5 147 1.9E-22 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily GYO_0816 63bf84331c731989ed179c32694b4b0f 153 SUPERFAMILY SSF46785 36 144 6.0E-18 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily GYO_0816 63bf84331c731989ed179c32694b4b0f 153 Pfam PF01047 MarR family 37 95 4.6E-9 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 GYO_1138 188d213dda919289eb80bd9dcacc1d4b 353 Pfam PF06081 Aromatic acid exporter family member 1 1 142 9.8E-43 T 14-10-2018 IPR010343 Aromatic acid exporter family member 1 GYO_2720 3c02c05b8bc71eac21959e0261904f9f 57 SUPERFAMILY SSF47406 9 38 5.89E-12 T 14-10-2018 IPR036281 SinR repressor/SinI anti-repressor, dimerisation domain superfamily GO:0006355|GO:0046983 GYO_2720 3c02c05b8bc71eac21959e0261904f9f 57 Pfam PF08671 Anti-repressor SinI 11 36 1.0E-12 T 14-10-2018 IPR010981 SinR repressor/SinI anti-repressor, dimerisation domain GO:0006355|GO:0046983 GYO_2641 18aaecdb06cbb26c0d5c4fd346b65f78 240 Gene3D G3DSA:3.40.50.300 1 240 4.9E-82 T 14-10-2018 GYO_2641 18aaecdb06cbb26c0d5c4fd346b65f78 240 SUPERFAMILY SSF52540 1 235 1.45E-80 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase GYO_2641 18aaecdb06cbb26c0d5c4fd346b65f78 240 SMART SM00382 26 219 6.8E-13 T 14-10-2018 IPR003593 AAA+ ATPase domain GYO_2641 18aaecdb06cbb26c0d5c4fd346b65f78 240 Pfam PF00005 ABC transporter 17 165 5.1E-39 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 GYO_2641 18aaecdb06cbb26c0d5c4fd346b65f78 240 PIRSF PIRSF039085 1 240 4.3E-115 T 14-10-2018 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 GYO_2641 18aaecdb06cbb26c0d5c4fd346b65f78 240 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 GYO_1657 7b9249571cdc2135472283e5ccafaa96 60 Pfam PF13076 Fur-regulated basic protein A 13 43 6.0E-5 T 14-10-2018 IPR025072 Fur-regulated basic protein A GYO_3651 7bc927ac81f6b895f909dd8ff8a1a169 260 PRINTS PR00069 Aldo-keto reductase signature 144 173 2.3E-53 T 14-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 GYO_3651 7bc927ac81f6b895f909dd8ff8a1a169 260 PRINTS PR00069 Aldo-keto reductase signature 181 205 2.3E-53 T 14-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 GYO_3651 7bc927ac81f6b895f909dd8ff8a1a169 260 PRINTS PR00069 Aldo-keto reductase signature 110 127 2.3E-53 T 14-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 GYO_3651 7bc927ac81f6b895f909dd8ff8a1a169 260 PRINTS PR00069 Aldo-keto reductase signature 80 98 2.3E-53 T 14-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 GYO_3651 7bc927ac81f6b895f909dd8ff8a1a169 260 PRINTS PR00069 Aldo-keto reductase signature 24 48 2.3E-53 T 14-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 GYO_3651 7bc927ac81f6b895f909dd8ff8a1a169 260 SUPERFAMILY SSF51430 1 252 3.01E-95 T 14-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily GYO_3651 7bc927ac81f6b895f909dd8ff8a1a169 260 ProSitePatterns PS00062 Aldo/keto reductase family signature 2. 110 127 - T 14-10-2018 IPR018170 Aldo/keto reductase, conserved site GO:0016491|GO:0055114 GYO_3651 7bc927ac81f6b895f909dd8ff8a1a169 260 Pfam PF00248 Aldo/keto reductase family 14 246 3.1E-55 T 14-10-2018 IPR023210 NADP-dependent oxidoreductase domain GYO_3651 7bc927ac81f6b895f909dd8ff8a1a169 260 ProSitePatterns PS00063 Aldo/keto reductase family putative active site signature. 214 229 - T 14-10-2018 IPR018170 Aldo/keto reductase, conserved site GO:0016491|GO:0055114 GYO_3651 7bc927ac81f6b895f909dd8ff8a1a169 260 ProSitePatterns PS00798 Aldo/keto reductase family signature 1. 28 45 - T 14-10-2018 IPR018170 Aldo/keto reductase, conserved site GO:0016491|GO:0055114 GYO_3651 7bc927ac81f6b895f909dd8ff8a1a169 260 Gene3D G3DSA:3.20.20.100 1 260 4.9E-128 T 14-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily GYO_3651 7bc927ac81f6b895f909dd8ff8a1a169 260 PIRSF PIRSF000097 1 102 4.2E-38 T 14-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 GYO_3651 7bc927ac81f6b895f909dd8ff8a1a169 260 PIRSF PIRSF000097 99 256 8.4E-54 T 14-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 GYO_0769 83eb80a6cc15553ceeafdcb72a4835c6 300 SUPERFAMILY SSF103481 42 143 4.32E-18 T 14-10-2018 GYO_0769 83eb80a6cc15553ceeafdcb72a4835c6 300 Pfam PF00892 EamA-like transporter family 149 284 3.4E-20 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 GYO_0769 83eb80a6cc15553ceeafdcb72a4835c6 300 Pfam PF00892 EamA-like transporter family 18 139 1.6E-27 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 GYO_0769 83eb80a6cc15553ceeafdcb72a4835c6 300 SUPERFAMILY SSF103481 190 287 5.75E-8 T 14-10-2018 GYO_4027 ec3758559c9088ed6dc05dcf8b336fa3 213 SUPERFAMILY SSF51735 1 210 1.97E-30 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily GYO_4027 ec3758559c9088ed6dc05dcf8b336fa3 213 Pfam PF13460 NAD(P)H-binding 7 198 2.1E-22 T 14-10-2018 IPR016040 NAD(P)-binding domain GYO_4027 ec3758559c9088ed6dc05dcf8b336fa3 213 Gene3D G3DSA:3.40.50.720 1 211 4.7E-51 T 14-10-2018 GYO_1724 8d8a0d81bbe07f07da374d57e1c3f47d 88 ProSitePatterns PS00589 PTS HPR domain serine phosphorylation site signature. 39 54 - T 14-10-2018 IPR002114 Phosphotransferase system, HPr serine phosphorylation site GYO_1724 8d8a0d81bbe07f07da374d57e1c3f47d 88 PRINTS PR00107 Phosphocarrier protein signature 13 29 2.0E-26 T 14-10-2018 IPR000032 Phosphocarrier protein HPr-like GYO_1724 8d8a0d81bbe07f07da374d57e1c3f47d 88 PRINTS PR00107 Phosphocarrier protein signature 38 53 2.0E-26 T 14-10-2018 IPR000032 Phosphocarrier protein HPr-like GYO_1724 8d8a0d81bbe07f07da374d57e1c3f47d 88 PRINTS PR00107 Phosphocarrier protein signature 53 70 2.0E-26 T 14-10-2018 IPR000032 Phosphocarrier protein HPr-like GYO_1724 8d8a0d81bbe07f07da374d57e1c3f47d 88 ProSitePatterns PS00369 PTS HPR domain histidine phosphorylation site signature. 13 20 - T 14-10-2018 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site GYO_1724 8d8a0d81bbe07f07da374d57e1c3f47d 88 Pfam PF00381 PTS HPr component phosphorylation site 3 82 2.5E-30 T 14-10-2018 IPR000032 Phosphocarrier protein HPr-like GYO_1724 8d8a0d81bbe07f07da374d57e1c3f47d 88 SUPERFAMILY SSF55594 1 83 2.09E-28 T 14-10-2018 IPR035895 HPr-like superfamily GYO_1724 8d8a0d81bbe07f07da374d57e1c3f47d 88 TIGRFAM TIGR01003 PTS_HPr_family: phosphocarrier, HPr family 1 81 9.9E-33 T 14-10-2018 IPR000032 Phosphocarrier protein HPr-like GYO_1724 8d8a0d81bbe07f07da374d57e1c3f47d 88 Gene3D G3DSA:3.30.1340.10 1 88 1.3E-37 T 14-10-2018 IPR035895 HPr-like superfamily GYO_4219 a1ed03b8564a8ff814ea72fada524ae3 200 SUPERFAMILY SSF52833 1 198 5.93E-39 T 14-10-2018 IPR036249 Thioredoxin-like superfamily GYO_4219 a1ed03b8564a8ff814ea72fada524ae3 200 Pfam PF01323 DSBA-like thioredoxin domain 5 193 1.3E-36 T 14-10-2018 IPR001853 DSBA-like thioredoxin domain GO:0015035 Reactome: R-HSA-156590|Reactome: R-HSA-9033241 GYO_4219 a1ed03b8564a8ff814ea72fada524ae3 200 Gene3D G3DSA:3.40.30.10 1 196 8.4E-46 T 14-10-2018 GYO_2090 a0951aff49f6c4909889b42a4eb3e17a 137 Pfam PF12788 YmaF family 16 69 2.1E-8 T 14-10-2018 IPR024307 YmaF GYO_2159 5ecfa8d776a7606a0efeb887e78f4b3b 72 Hamap MF_00363 UPF0154 protein . 2 72 22.548 T 14-10-2018 IPR005359 Protein with unknown function UPF0154 GYO_2159 5ecfa8d776a7606a0efeb887e78f4b3b 72 ProDom PD048972 UPF0154 TRANSMEMBRANE MEMBRANE UNCHARACTERIZED FAMILY YNEF SUPERFAMILY MG335.1 EXPORTED MYCGA5700 1 41 1.0E-6 T 14-10-2018 IPR005359 Protein with unknown function UPF0154 GYO_2159 5ecfa8d776a7606a0efeb887e78f4b3b 72 Pfam PF03672 Uncharacterised protein family (UPF0154) 11 69 3.1E-31 T 14-10-2018 IPR005359 Protein with unknown function UPF0154 GYO_4396 747372ebe5fc728e936ac47f5015ce3f 151 Pfam PF06271 RDD family 4 144 3.1E-27 T 14-10-2018 IPR010432 RDD GYO_2642 903c3dfa2ee3cb54f7e08ab73625804e 219 Gene3D G3DSA:1.10.3720.10 1 218 3.1E-56 T 14-10-2018 IPR035906 MetI-like superfamily GYO_2642 903c3dfa2ee3cb54f7e08ab73625804e 219 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 12 110 9.6E-32 T 14-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 GYO_2642 903c3dfa2ee3cb54f7e08ab73625804e 219 SUPERFAMILY SSF161098 13 207 2.09E-44 T 14-10-2018 IPR035906 MetI-like superfamily GYO_2642 903c3dfa2ee3cb54f7e08ab73625804e 219 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 33 216 3.5E-23 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 GYO_2963 36c060eae559e92cdca365a9a505f16e 160 Pfam PF07849 Protein of unknown function (DUF1641) 118 155 1.9E-16 T 14-10-2018 IPR012440 Protein of unknown function DUF1641 GYO_3235 721f4db277f6e1bbcca320c7d1090f7d 105 Pfam PF03413 Peptidase propeptide and YPEB domain 29 97 4.3E-6 T 14-10-2018 IPR025711 PepSY domain GYO_1572 14e93b6208fd076680943e47fdf47bb9 275 Pfam PF14550 Putative phage serine protease XkdF 40 157 9.2E-46 T 14-10-2018 IPR027924 Phage-like element PBSX protein, XkdF GYO_0962 73d0e302550de4f4917a7398849903bf 231 SUPERFAMILY SSF52266 6 224 7.47E-56 T 14-10-2018 GYO_0962 73d0e302550de4f4917a7398849903bf 231 Gene3D G3DSA:3.40.50.1110 5 228 5.7E-70 T 14-10-2018 IPR036514 SGNH hydrolase superfamily GYO_0962 73d0e302550de4f4917a7398849903bf 231 Pfam PF13472 GDSL-like Lipase/Acylhydrolase family 11 200 2.8E-15 T 14-10-2018 IPR013830 SGNH hydrolase-type esterase domain GYO_2639 b4db75f2b6ebaa6eae729128dadc9a89 176 Gene3D G3DSA:2.40.440.10 12 174 5.7E-40 T 14-10-2018 IPR038063 L,D-transpeptidase catalytic domain-like GYO_2639 b4db75f2b6ebaa6eae729128dadc9a89 176 SUPERFAMILY SSF141523 24 151 4.45E-32 T 14-10-2018 IPR038063 L,D-transpeptidase catalytic domain-like GYO_2639 b4db75f2b6ebaa6eae729128dadc9a89 176 Pfam PF03734 L,D-transpeptidase catalytic domain 27 150 6.2E-20 T 14-10-2018 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 GYO_2906 c4927593b1703684f53f4d1927cfc490 57 Gene3D G3DSA:3.30.465.10 1 57 1.7E-5 T 14-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 GYO_2906 c4927593b1703684f53f4d1927cfc490 57 Pfam PF03471 Transporter associated domain 1 55 1.7E-5 T 14-10-2018 IPR005170 Transporter-associated domain GYO_2906 c4927593b1703684f53f4d1927cfc490 57 SUPERFAMILY SSF56176 5 54 3.0E-7 T 14-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 GYO_1979 da82a0eabf9bb415035d484b73cb4cd1 147 TIGRFAM TIGR02473 flagell_FliJ: flagellar export protein FliJ 4 143 1.4E-38 T 14-10-2018 IPR012823 Flagellar export FliJ GO:0009288|GO:0071973 GYO_1979 da82a0eabf9bb415035d484b73cb4cd1 147 Pfam PF02050 Flagellar FliJ protein 19 142 1.8E-18 T 14-10-2018 IPR012823 Flagellar export FliJ GO:0009288|GO:0071973 GYO_4482 25d5d00bba9b033fae9bd1b5a3fe7576 399 SUPERFAMILY SSF103473 7 390 3.92E-59 T 14-10-2018 IPR036259 MFS transporter superfamily GYO_4482 25d5d00bba9b033fae9bd1b5a3fe7576 399 Gene3D G3DSA:1.20.1250.20 10 386 5.5E-50 T 14-10-2018 GYO_4482 25d5d00bba9b033fae9bd1b5a3fe7576 399 Pfam PF07690 Major Facilitator Superfamily 18 323 1.2E-37 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 GYO_1627 9984e644c0bd306300f479d917d18abd 171 Gene3D G3DSA:3.40.630.30 2 170 6.4E-42 T 14-10-2018 GYO_1627 9984e644c0bd306300f479d917d18abd 171 Pfam PF13302 Acetyltransferase (GNAT) domain 11 149 1.1E-33 T 14-10-2018 IPR000182 GNAT domain GYO_1627 9984e644c0bd306300f479d917d18abd 171 SUPERFAMILY SSF55729 4 158 1.02E-38 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase GYO_1239 75aaef07f3853a6e39b57af564cdd020 96 ProDom PD065873 YHDK TRANSCRIPTION ANTI-SIGMA-M REPRESSOR TRANSMEMBRANE MEMBRANE PROBABLE REGULATION FACTOR 1 96 6.0E-39 T 14-10-2018 IPR020496 Probable anti-sigma M factor YhdK GYO_1239 75aaef07f3853a6e39b57af564cdd020 96 Pfam PF17453 Sigma-M inhibitor protein 1 96 3.0E-59 T 14-10-2018 IPR020496 Probable anti-sigma M factor YhdK GYO_2229 9b6edd8fe8fe17a137054535c338ac28 248 Pfam PF01061 ABC-2 type transporter 6 206 1.1E-20 T 14-10-2018 IPR013525 ABC-2 type transporter GO:0016020 Reactome: R-HSA-1369062 GYO_2229 9b6edd8fe8fe17a137054535c338ac28 248 PIRSF PIRSF006648 3 247 6.6E-15 T 14-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 GYO_2230 e3de88672febc066691f0e77ebe485c0 312 SMART SM00382 29 212 8.0E-11 T 14-10-2018 IPR003593 AAA+ ATPase domain GYO_2230 e3de88672febc066691f0e77ebe485c0 312 Gene3D G3DSA:3.40.50.300 2 242 2.5E-72 T 14-10-2018 GYO_2230 e3de88672febc066691f0e77ebe485c0 312 SUPERFAMILY SSF52540 7 232 3.7E-65 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase GYO_2230 e3de88672febc066691f0e77ebe485c0 312 ProSitePatterns PS00211 ABC transporters family signature. 136 150 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 GYO_2230 e3de88672febc066691f0e77ebe485c0 312 Pfam PF00005 ABC transporter 21 163 2.0E-32 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 GYO_3256 462250702f17b9bb885fd1252209db5c 60 Pfam PF10957 Sporulation protein Cse60 1 60 2.6E-35 T 14-10-2018 IPR020296 Sporulation protein Cse60 GYO_3256 462250702f17b9bb885fd1252209db5c 60 ProDom PD052690 CSE60 CYTOSOLIC YTEV LJ928 SPORULATION ORF85 PROPHAGE 1 59 3.0E-28 T 14-10-2018 IPR020296 Sporulation protein Cse60 GYO_0661 ab57b4df42f95d6c45a3628ac7d8b4b9 119 SUPERFAMILY SSF54909 1 93 9.08E-13 T 14-10-2018 IPR011008 Dimeric alpha-beta barrel GYO_0661 ab57b4df42f95d6c45a3628ac7d8b4b9 119 Pfam PF16291 Domain of unknown function (DUF4937 2 92 5.9E-34 T 14-10-2018 IPR032555 Domain of unknown function DUF4937 GYO_3965 df519c31d6a1663a8a7b34b34b4a8f7e 114 Pfam PF13789 Domain of unknown function (DUF4181) 18 110 3.0E-19 T 14-10-2018 IPR025441 Protein of unknown function DUF4181 GYO_0902 5adf37f726c3bb87d8ba0906a138103e 162 Gene3D G3DSA:3.40.50.7700 1 162 2.4E-75 T 14-10-2018 IPR035893 PurE domain superfamily Reactome: R-HSA-73817 GYO_0902 5adf37f726c3bb87d8ba0906a138103e 162 SMART SM01001 3 154 1.4E-111 T 14-10-2018 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 GYO_0902 5adf37f726c3bb87d8ba0906a138103e 162 Hamap MF_01929 N5-carboxyaminoimidazole ribonucleotide mutase [purE]. 5 158 34.259 T 14-10-2018 IPR033747 Class I PurE GYO_0902 5adf37f726c3bb87d8ba0906a138103e 162 SUPERFAMILY SSF52255 4 160 5.89E-71 T 14-10-2018 IPR035893 PurE domain superfamily Reactome: R-HSA-73817 GYO_0902 5adf37f726c3bb87d8ba0906a138103e 162 Pfam PF00731 AIR carboxylase 5 152 2.0E-67 T 14-10-2018 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 GYO_0902 5adf37f726c3bb87d8ba0906a138103e 162 PIRSF PIRSF001338 1 162 2.1E-71 T 14-10-2018 IPR024694 PurE, prokaryotic type GO:0006189 KEGG: 00230+5.4.99.18|MetaCyc: PWY-6123|MetaCyc: PWY-7234 GYO_0902 5adf37f726c3bb87d8ba0906a138103e 162 TIGRFAM TIGR01162 purE: phosphoribosylaminoimidazole carboxylase, catalytic subunit 5 161 6.5E-70 T 14-10-2018 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 GYO_3528 f3ba8740ee6944234ebeebc8d178aa03 244 TIGRFAM TIGR02832 spo_yunB: sporulation protein YunB 1 213 4.0E-71 T 14-10-2018 IPR014197 Sporulation protein YunB GYO_3528 f3ba8740ee6944234ebeebc8d178aa03 244 PIRSF PIRSF021383 1 226 6.5E-111 T 14-10-2018 IPR014197 Sporulation protein YunB GYO_3528 f3ba8740ee6944234ebeebc8d178aa03 244 Pfam PF09560 Sporulation protein YunB (Spo_YunB) 120 209 3.6E-30 T 14-10-2018 IPR014197 Sporulation protein YunB GYO_4171 df1a07d07fd8371bbeb53d2ee7d067e0 246 SUPERFAMILY SSF53448 2 236 7.21E-68 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases GYO_4171 df1a07d07fd8371bbeb53d2ee7d067e0 246 Pfam PF00483 Nucleotidyl transferase 2 236 4.5E-52 T 14-10-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 GYO_4171 df1a07d07fd8371bbeb53d2ee7d067e0 246 Gene3D G3DSA:3.90.550.10 1 243 1.1E-67 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases GYO_3023 6995482e293520bd2d2a8e06ba7befe2 172 Pfam PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) 17 171 3.4E-16 T 14-10-2018 IPR019076 Sporulation lipoprotein YhcN/YlaJ-like GYO_4467 a9c9a9f8e6d8d91466c3d56379c9ba28 703 Pfam PF13231 Dolichyl-phosphate-mannose-protein mannosyltransferase 63 221 5.1E-31 T 14-10-2018 IPR038731 Glycosyltransferase RgtA/B/C/D-like GYO_3147 afd672ecb9df02e940d4ff83cbbcf6bc 213 Pfam PF09335 SNARE associated Golgi protein 61 174 7.7E-23 T 14-10-2018 IPR032816 SNARE associated Golgi protein GYO_2259 3ff1c2f74d19ed052fc4d52a26fbbc62 265 Pfam PF05675 Protein of unknown function (DUF817) 6 240 5.3E-107 T 14-10-2018 IPR008535 Protein of unknown function DUF817 GYO_2259 3ff1c2f74d19ed052fc4d52a26fbbc62 265 PIRSF PIRSF009141 1 261 3.6E-132 T 14-10-2018 IPR008535 Protein of unknown function DUF817 GYO_0649 75a5a4d782abd7e9a1633d8a1967f581 703 Pfam PF03170 Bacterial cellulose synthase subunit 48 211 1.8E-19 T 14-10-2018 IPR018513 Cellulose synthase BcsB, bacterial GO:0006011|GO:0016020 GYO_0649 75a5a4d782abd7e9a1633d8a1967f581 703 Pfam PF03170 Bacterial cellulose synthase subunit 330 527 7.7E-12 T 14-10-2018 IPR018513 Cellulose synthase BcsB, bacterial GO:0006011|GO:0016020 GYO_0649 75a5a4d782abd7e9a1633d8a1967f581 703 Gene3D G3DSA:2.60.120.260 35 166 1.5E-12 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily GYO_0649 75a5a4d782abd7e9a1633d8a1967f581 703 Gene3D G3DSA:2.60.120.260 328 473 2.8E-12 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily GYO_2252 d13baa49b4963dde149039d84e8c8a35 162 Pfam PF16302 Domain of unknown function (DUF4944) 31 161 1.5E-57 T 14-10-2018 IPR032545 Protein of unknown function DUF4944 GYO_2252 d13baa49b4963dde149039d84e8c8a35 162 ProDom PD034585 YOAO YDHH MEMBRANE PRECURSOR TRANSMEMBRANE SIGNAL 4 159 2.0E-68 T 14-10-2018 IPR032545 Protein of unknown function DUF4944 GYO_3084 f4206edce00325a9aba568b595f39b92 366 Pfam PF10646 Sporulation and spore germination 81 190 1.5E-20 T 14-10-2018 IPR019606 GerMN domain GYO_3084 f4206edce00325a9aba568b595f39b92 366 Pfam PF10646 Sporulation and spore germination 227 341 8.2E-17 T 14-10-2018 IPR019606 GerMN domain GYO_3084 f4206edce00325a9aba568b595f39b92 366 SMART SM00909 255 346 7.4E-23 T 14-10-2018 IPR019606 GerMN domain GYO_3084 f4206edce00325a9aba568b595f39b92 366 SMART SM00909 104 194 7.7E-26 T 14-10-2018 IPR019606 GerMN domain GYO_4252 3a6db879a88907dc71c5f22d6e93fd8e 395 PIRSF PIRSF500216 1 395 2.3E-172 T 14-10-2018 IPR024024 D-alanyl transfer protein DltB GYO_4252 3a6db879a88907dc71c5f22d6e93fd8e 395 Pfam PF03062 MBOAT, membrane-bound O-acyltransferase family 143 383 8.5E-18 T 14-10-2018 IPR004299 Membrane bound O-acyl transferase, MBOAT GYO_4252 3a6db879a88907dc71c5f22d6e93fd8e 395 TIGRFAM TIGR04091 LTA_dltB: D-alanyl-lipoteichoic acid biosynthesis protein DltB 3 390 2.6E-161 T 14-10-2018 IPR024024 D-alanyl transfer protein DltB GYO_4252 3a6db879a88907dc71c5f22d6e93fd8e 395 PIRSF PIRSF016636 2 393 2.2E-87 T 14-10-2018 IPR024194 Alginate O-acetyltransferase AlgI/D-alanyl transfer protein DltB GYO_2537 c7c5ca13b59144c8762d8020414cf172 189 Pfam PF12822 ECF transporter, substrate-specific component 4 173 6.6E-25 T 14-10-2018 IPR024529 ECF transporter, substrate-specific component GO:0005215 GYO_2537 c7c5ca13b59144c8762d8020414cf172 189 PIRSF PIRSF037778 1 186 2.3E-46 T 14-10-2018 IPR025720 ECF transporter, Riboflavin transporter RibU GO:0005886|GO:0032217|GO:0032218 GYO_2537 c7c5ca13b59144c8762d8020414cf172 189 Gene3D G3DSA:1.10.1760.20 1 188 1.6E-50 T 14-10-2018 GYO_2244 c0fc104c09473568640181a612884de3 225 Pfam PF06912 Protein of unknown function (DUF1275) 10 214 5.3E-34 T 14-10-2018 IPR010699 Protein of unknown function DUF1275 GYO_1842 73bf3368e48b6a0996d01df8ce1315d2 132 Pfam PF14071 Putative coat protein 12 132 3.1E-44 T 14-10-2018 IPR025953 Putative coat protein YlbD GYO_3844 4e74123cf008b81dfd0519dff75a68e9 248 Gene3D G3DSA:3.40.50.11710 1 234 4.6E-84 T 14-10-2018 IPR038622 Cyclodipeptide synthase superfamily GO:0016755 GYO_3844 4e74123cf008b81dfd0519dff75a68e9 248 Pfam PF16715 Cyclodipeptide synthase 13 234 4.1E-84 T 14-10-2018 IPR030903 Cyclodipeptide synthase GO:0016755 GYO_3844 4e74123cf008b81dfd0519dff75a68e9 248 TIGRFAM TIGR04539 tRNA_cyclodipep: tRNA-dependent cyclodipeptide synthase 13 233 8.3E-79 T 14-10-2018 IPR030903 Cyclodipeptide synthase GO:0016755 GYO_0964 3737811637f656005b4c137286e1b802 208 Pfam PF04854 Protein of unknown function, DUF624 19 95 1.4E-25 T 14-10-2018 IPR006938 Protein of unknown function DUF624 GYO_1016 21b9ba6ecbb12836b60c294e8f9ce3ec 320 Gene3D G3DSA:1.10.3470.10 1 319 7.2E-94 T 14-10-2018 IPR037294 ABC transporter, BtuC-like GYO_1016 21b9ba6ecbb12836b60c294e8f9ce3ec 320 Pfam PF01032 FecCD transport family 10 315 8.5E-96 T 14-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 GYO_1016 21b9ba6ecbb12836b60c294e8f9ce3ec 320 SUPERFAMILY SSF81345 2 315 2.48E-81 T 14-10-2018 IPR037294 ABC transporter, BtuC-like GYO_1821 8d6a9196d9d3e4b5e66ce959cec5c13a 68 Pfam PF09963 Uncharacterized protein conserved in bacteria (DUF2197) 1 56 5.3E-32 T 14-10-2018 IPR019241 Protein of unknown function DUF2197 GYO_2517 6082ac0830b043c2a2fffea8c03b9ba1 43 Pfam PF14140 YpzI-like protein 1 42 7.4E-27 T 14-10-2018 IPR025414 YpzI-like protein GYO_1097 34c956431397da4f8fc273b1cc82167c 388 Pfam PF07730 Histidine kinase 180 245 1.7E-16 T 14-10-2018 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 GYO_1097 34c956431397da4f8fc273b1cc82167c 388 Gene3D G3DSA:3.30.565.10 246 371 1.5E-26 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily GYO_1097 34c956431397da4f8fc273b1cc82167c 388 SMART SM00387 283 373 5.1E-4 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase GYO_1097 34c956431397da4f8fc273b1cc82167c 388 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 287 369 1.1E-5 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase GYO_1097 34c956431397da4f8fc273b1cc82167c 388 SUPERFAMILY SSF55874 248 367 8.12E-18 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily GYO_0181 0dd7627711a8157ab48cf6d15ff6218c 352 Pfam PF10609 NUBPL iron-transfer P-loop NTPase 109 344 1.2E-84 T 14-10-2018 IPR033756 Flagellum site-determining protein YlxH/ Fe-S cluster assembling factor NBP35 GYO_0181 0dd7627711a8157ab48cf6d15ff6218c 352 Hamap MF_02040 Iron-sulfur cluster carrier protein. 100 345 33.607 T 14-10-2018 IPR019591 Mrp/NBP35 ATP-binding protein GYO_0181 0dd7627711a8157ab48cf6d15ff6218c 352 Gene3D G3DSA:3.40.50.300 95 321 4.8E-67 T 14-10-2018 GYO_0181 0dd7627711a8157ab48cf6d15ff6218c 352 ProSitePatterns PS01215 Mrp family signature. 210 226 - T 14-10-2018 IPR000808 Mrp, conserved site GO:0005524 GYO_0181 0dd7627711a8157ab48cf6d15ff6218c 352 SUPERFAMILY SSF52540 107 348 5.92E-47 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase GYO_2742 20bd99da571b2bda1e0cd811c9670a39 81 ProDom PD059814 YQGY TRANSMEMBRANE MEMBRANE PRECURSOR BH2821 SIGNAL 1 79 7.0E-38 T 14-10-2018 IPR020254 Protein of unknown function DUF2626 GYO_2742 20bd99da571b2bda1e0cd811c9670a39 81 Pfam PF11117 Protein of unknown function (DUF2626) 1 74 6.2E-37 T 14-10-2018 IPR020254 Protein of unknown function DUF2626 GYO_4440 7e75b5e42119c597d70b5bd175361971 38 TIGRFAM TIGR04429 Phr_nterm: Phr family secreted Rap phosphatase inhibitor 1 25 8.6E-8 T 14-10-2018 IPR030968 Phr family, secreted RapG/RapK phosphatase inhibitor GYO_0875 bb6c211b49f17ab2b97a29d8a9f61976 341 Pfam PF08271 TFIIB zinc-binding 5 43 3.0E-8 T 14-10-2018 IPR013137 Zinc finger, TFIIB-type GYO_0875 bb6c211b49f17ab2b97a29d8a9f61976 341 Gene3D G3DSA:2.20.28.30 50 90 1.0E-5 T 14-10-2018 GYO_0875 bb6c211b49f17ab2b97a29d8a9f61976 341 Gene3D G3DSA:2.20.28.30 2 35 2.9E-5 T 14-10-2018 GYO_1960 42b564a2dd7fcbcc9018ef3988ea12c1 93 Pfam PF01312 FlhB HrpN YscU SpaS Family 6 82 4.4E-19 T 14-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 GYO_1960 42b564a2dd7fcbcc9018ef3988ea12c1 93 TIGRFAM TIGR00789 flhB_rel: FlhB domain protein 7 89 5.0E-41 T 14-10-2018 IPR004683 Type III secretion system substrate exporter FlhB-like GYO_1960 42b564a2dd7fcbcc9018ef3988ea12c1 93 Gene3D G3DSA:3.40.1690.10 6 87 1.9E-26 T 14-10-2018 IPR029025 Type III secretion system substrate exporter, C-terminal GYO_1960 42b564a2dd7fcbcc9018ef3988ea12c1 93 SUPERFAMILY SSF160544 5 86 4.58E-24 T 14-10-2018 IPR029025 Type III secretion system substrate exporter, C-terminal GYO_0624 e49692fe3d7c03c5fbecb4a40702147f 404 Pfam PF01566 Natural resistance-associated macrophage protein 51 371 1.3E-21 T 14-10-2018 IPR001046 NRAMP family GO:0016020|GO:0030001|GO:0046873 Reactome: R-HSA-425410 GYO_0979 211669650760d45a6eb00c744a9ff56d 55 Pfam PF10055 Uncharacterized small protein (DUF2292) 11 47 3.8E-16 T 14-10-2018 IPR018743 Protein of unknown function DUF2292 GYO_2341 330ab3521f5569ff8e7c09008b3b75db 296 SMART SM00382 56 202 0.001 T 14-10-2018 IPR003593 AAA+ ATPase domain GYO_2341 330ab3521f5569ff8e7c09008b3b75db 296 SUPERFAMILY SSF52540 49 279 4.13E-37 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase GYO_2341 330ab3521f5569ff8e7c09008b3b75db 296 Gene3D G3DSA:3.40.50.300 42 213 2.8E-34 T 14-10-2018 GYO_2341 330ab3521f5569ff8e7c09008b3b75db 296 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 60 78 3.7E-5 T 14-10-2018 IPR001270 ClpA/B family GO:0005524 GYO_2341 330ab3521f5569ff8e7c09008b3b75db 296 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 132 150 3.7E-5 T 14-10-2018 IPR001270 ClpA/B family GO:0005524 GYO_2341 330ab3521f5569ff8e7c09008b3b75db 296 Pfam PF07728 AAA domain (dynein-related subfamily) 59 196 4.2E-28 T 14-10-2018 IPR011704 ATPase, dynein-related, AAA domain GO:0005524|GO:0016887 GYO_2842 4a2a1a3262569258ccfecf8071c10e3c 208 Pfam PF09335 SNARE associated Golgi protein 53 171 1.4E-26 T 14-10-2018 IPR032816 SNARE associated Golgi protein GYO_4327 a22b4e000eb6edd0027a7668d2343fa5 87 Pfam PF00892 EamA-like transporter family 3 71 5.8E-11 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 GYO_4327 a22b4e000eb6edd0027a7668d2343fa5 87 SUPERFAMILY SSF103481 4 75 3.92E-10 T 14-10-2018 GYO_4438 5e340ad20dc4b84549446c8a2404175a 156 Gene3D G3DSA:3.40.630.30 2 156 3.9E-46 T 14-10-2018 GYO_4438 5e340ad20dc4b84549446c8a2404175a 156 SUPERFAMILY SSF55729 3 151 2.57E-27 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase GYO_4438 5e340ad20dc4b84549446c8a2404175a 156 Pfam PF00583 Acetyltransferase (GNAT) family 55 145 1.7E-18 T 14-10-2018 IPR000182 GNAT domain GYO_1480 cc5c5ead178d13524879cc4776c7d8e0 162 Pfam PF10612 Spore coat protein Z 1 143 6.8E-39 T 14-10-2018 IPR019593 Spore coat protein Z/Y GYO_3744 f85a44981d6762098e5b23a5b6436e06 429 Pfam PF07745 Glycosyl hydrolase family 53 54 417 3.0E-142 T 14-10-2018 IPR011683 Glycosyl hydrolase family 53 GO:0015926 GYO_3744 f85a44981d6762098e5b23a5b6436e06 429 SUPERFAMILY SSF51445 51 421 9.58E-115 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily GYO_3744 f85a44981d6762098e5b23a5b6436e06 429 Gene3D G3DSA:3.20.20.80 33 427 8.0E-169 T 14-10-2018 GYO_3388 58c1a1c5e4db8aa12af7caa32862cfeb 445 TIGRFAM TIGR00933 2a38: potassium uptake protein, TrkH family 34 417 2.6E-128 T 14-10-2018 IPR004772 TrkH potassium transport family GO:0015379|GO:0016021|GO:0071805 GYO_3388 58c1a1c5e4db8aa12af7caa32862cfeb 445 Pfam PF02386 Cation transport protein 41 430 1.1E-66 T 14-10-2018 IPR003445 Cation transporter GO:0006812|GO:0008324|GO:0055085 GYO_3850 58ddd68105c2bac8fc1148ceb35bac59 365 Pfam PF13349 Putative adhesin 167 359 7.1E-18 T 14-10-2018 IPR025164 Putative adhesin GYO_3850 58ddd68105c2bac8fc1148ceb35bac59 365 PIRSF PIRSF012569 1 365 2.1E-140 T 14-10-2018 IPR016599 Uncharacterised conserved protein UCP012569 GYO_1628 eec101f2f15d78f41adb981b0d252d22 112 Pfam PF00893 Small Multidrug Resistance protein 1 89 2.4E-25 T 14-10-2018 IPR000390 Small multidrug resistance protein family GO:0016021 GYO_1628 eec101f2f15d78f41adb981b0d252d22 112 SUPERFAMILY SSF103481 6 99 7.32E-15 T 14-10-2018 GYO_1628 eec101f2f15d78f41adb981b0d252d22 112 Gene3D G3DSA:1.10.3730.20 1 106 7.9E-24 T 14-10-2018 GYO_4493 4faa0ef94c396b21ba5931d6cb49f75b 157 Pfam PF04657 Putative inner membrane exporter, YdcZ 5 138 1.1E-29 T 14-10-2018 IPR006750 Putative inner membrane exporter, YdcZ GYO_1064 299a121ffb173ae4605c3090c542ca22 263 SUPERFAMILY SSF88713 33 253 2.3E-66 T 14-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 GYO_1064 299a121ffb173ae4605c3090c542ca22 263 Gene3D G3DSA:3.20.20.370 24 263 4.9E-97 T 14-10-2018 GYO_1064 299a121ffb173ae4605c3090c542ca22 263 TIGRFAM TIGR02884 spore_pdaA: delta-lactam-biosynthetic de-N-acetylase 30 253 1.8E-114 T 14-10-2018 IPR014235 Peptidoglycan-N-acetylmuramic acid deacetylase PdaA GYO_1064 299a121ffb173ae4605c3090c542ca22 263 Pfam PF01522 Polysaccharide deacetylase 61 184 1.5E-34 T 14-10-2018 IPR002509 NodB homology domain GO:0005975|GO:0016810 GYO_1646 0a8fe2ad14ca29a6ff94285c2751377a 199 Pfam PF09819 ABC-type cobalt transport system, permease component 7 125 2.2E-37 T 14-10-2018 IPR017195 ABC-type thiamin-related transport system, permease component 1, predicted GYO_1646 0a8fe2ad14ca29a6ff94285c2751377a 199 PIRSF PIRSF037394 1 191 1.1E-69 T 14-10-2018 IPR017195 ABC-type thiamin-related transport system, permease component 1, predicted GYO_2859 e544f2d74127f5985e96be8b844f5017 130 Pfam PF15594 Immunity protein 50 9 124 1.8E-29 T 14-10-2018 IPR028957 Immunity protein 50 GYO_3292 f04eda41955c163f685a7e5fdab604f1 436 Pfam PF12704 MacB-like periplasmic core domain 22 270 2.2E-11 T 14-10-2018 IPR025857 MacB-like periplasmic core domain GYO_3292 f04eda41955c163f685a7e5fdab604f1 436 Pfam PF02687 FtsX-like permease family 325 427 2.0E-12 T 14-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 GYO_4463 7dd2b5e009c30760cef52f8f16aa3d58 67 Pfam PF09954 Uncharacterized protein conserved in bacteria (DUF2188) 6 67 1.8E-12 T 14-10-2018 IPR018691 Protein of unknown function DUF2188 GYO_4463 7dd2b5e009c30760cef52f8f16aa3d58 67 ProDom PD054650 YYCD 3 67 7.0E-29 T 14-10-2018 IPR020086 Uncharacterised protein family YycD GYO_1270 19665dc5acf1bfb0b19fecf9c862009f 363 Gene3D G3DSA:3.30.1490.20 127 189 2.6E-6 T 14-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 GYO_1270 19665dc5acf1bfb0b19fecf9c862009f 363 SUPERFAMILY SSF56059 107 331 1.4E-20 T 14-10-2018 GYO_1270 19665dc5acf1bfb0b19fecf9c862009f 363 Pfam PF14398 YheC/D like ATP-grasp 98 349 4.2E-65 T 14-10-2018 IPR026838 Endospore coat-associated protein YheC/D GYO_0898 a07d75da68a9f3c5471693a992fe256a 267 ProDom PD113106 YVBI TRANSMEMBRANE MEMBRANE YEBC YBEC 69 258 4.0E-73 T 14-10-2018 GYO_2845 48547067bd252d5b2a9d54c7c1ec15f4 136 Pfam PF14040 Deoxyribonuclease NucA/NucB 39 127 1.8E-12 T 14-10-2018 IPR029476 Deoxyribonuclease NucA/NucB GYO_1339 bd4a75cb97faf218bb010b213f023595 186 PIRSF PIRSF016661 1 179 2.0E-42 T 14-10-2018 IPR003784 BioY protein GO:0005886|GO:0015225|GO:0015878 GYO_1339 bd4a75cb97faf218bb010b213f023595 186 Pfam PF02632 BioY family 30 171 6.4E-33 T 14-10-2018 IPR003784 BioY protein GO:0005886|GO:0015225|GO:0015878 GYO_1339 bd4a75cb97faf218bb010b213f023595 186 Gene3D G3DSA:1.10.1760.20 2 178 1.1E-45 T 14-10-2018 GYO_1626 b5d3d3182d5538c768b7d6b586931ec7 175 SUPERFAMILY SSF109854 3 167 3.51E-28 T 14-10-2018 IPR034660 DinB/YfiT-like putative metalloenzymes GYO_1626 b5d3d3182d5538c768b7d6b586931ec7 175 Pfam PF12867 DinB superfamily 27 159 2.0E-11 T 14-10-2018 IPR024775 DinB-like domain GYO_1626 b5d3d3182d5538c768b7d6b586931ec7 175 Gene3D G3DSA:1.20.120.450 3 169 2.0E-19 T 14-10-2018 IPR034660 DinB/YfiT-like putative metalloenzymes GYO_1985 a0321611c07736e5712e2da0dd45938c 141 Pfam PF03748 Flagellar basal body-associated protein FliL 49 141 9.8E-18 T 14-10-2018 IPR005503 Flagellar basal body-associated protein FliL GO:0006935|GO:0009425|GO:0071973 GYO_0830 0e130ec762a7e840dd4d4017ba831e36 395 TIGRFAM TIGR01426 MGT: glycosyltransferase, MGT family 7 376 4.1E-91 T 14-10-2018 IPR006326 UDP-glycosyltransferase, MGT GO:0016758|GO:0016999 GYO_0830 0e130ec762a7e840dd4d4017ba831e36 395 Gene3D G3DSA:3.40.50.2000 212 375 3.0E-102 T 14-10-2018 GYO_0830 0e130ec762a7e840dd4d4017ba831e36 395 Gene3D G3DSA:3.40.50.2000 5 376 3.0E-102 T 14-10-2018 GYO_0830 0e130ec762a7e840dd4d4017ba831e36 395 Pfam PF00201 UDP-glucoronosyl and UDP-glucosyl transferase 225 370 2.7E-17 T 14-10-2018 IPR002213 UDP-glucuronosyl/UDP-glucosyltransferase GO:0016758 Reactome: R-HSA-156588 GYO_0830 0e130ec762a7e840dd4d4017ba831e36 395 SUPERFAMILY SSF53756 1 391 3.38E-70 T 14-10-2018 GYO_0660 77579531dade8434dc67775fa514aa24 108 SUPERFAMILY SSF51182 12 102 1.2E-19 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily GYO_0660 77579531dade8434dc67775fa514aa24 108 ProSitePatterns PS00725 Germin family signature. 38 51 - T 14-10-2018 IPR019780 Germin, manganese binding site GO:0030145 GYO_0660 77579531dade8434dc67775fa514aa24 108 Gene3D G3DSA:2.60.120.10 2 106 3.6E-27 T 14-10-2018 IPR014710 RmlC-like jelly roll fold GYO_0660 77579531dade8434dc67775fa514aa24 108 Pfam PF07883 Cupin domain 41 88 8.4E-13 T 14-10-2018 IPR013096 Cupin 2, conserved barrel GYO_4181 7fa67b3dc4c7218c1818ce2c4a16cad8 123 Pfam PF04241 Protein of unknown function (DUF423) 18 105 2.2E-31 T 14-10-2018 IPR006696 Protein of unknown function DUF423 GYO_4075 fc9b5f94b378b43a16398d5ca4486eb9 95 Pfam PF17247 Family of unknown function (DUF5316) 31 95 1.4E-13 T 14-10-2018 IPR035167 Protein of unknown function DUF5316 GYO_0039 e2aec0e20eb0e72cb633ad0542a2795c 146 SUPERFAMILY SSF158397 27 146 6.54E-34 T 14-10-2018 IPR024042 TM1646-like domain superfamily GYO_0039 e2aec0e20eb0e72cb633ad0542a2795c 146 Gene3D G3DSA:1.20.120.490 25 146 1.7E-36 T 14-10-2018 IPR024042 TM1646-like domain superfamily GYO_0039 e2aec0e20eb0e72cb633ad0542a2795c 146 Pfam PF03885 Protein of unknown function (DUF327) 16 145 7.9E-38 T 14-10-2018 IPR005585 Protein of unknown function DUF327 GYO_4247 99674ee1820c6f99f7ab6a9a2307ef4c 311 Hamap MF_01937 1,4-dihydroxy-2-naphthoate octaprenyltransferase [menA]. 18 305 18.815 T 14-10-2018 IPR004657 1,4-dihydroxy-2-naphthoate octaprenyltransferase GO:0009234|GO:0016021|GO:0046428 KEGG: 00130+2.5.1.74|MetaCyc: PWY-5839|MetaCyc: PWY-5851|MetaCyc: PWY-5852|MetaCyc: PWY-5853|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895 GYO_4247 99674ee1820c6f99f7ab6a9a2307ef4c 311 TIGRFAM TIGR00751 menA: 1,4-dihydroxy-2-naphthoate octaprenyltransferase 27 301 9.3E-33 T 14-10-2018 GYO_4247 99674ee1820c6f99f7ab6a9a2307ef4c 311 PIRSF PIRSF005355 10 310 4.6E-95 T 14-10-2018 IPR026046 UbiA prenyltransferase domain containing protein 1 GO:0004659 Reactome: R-HSA-6806664 GYO_4247 99674ee1820c6f99f7ab6a9a2307ef4c 311 Pfam PF01040 UbiA prenyltransferase family 35 262 7.5E-36 T 14-10-2018 IPR000537 UbiA prenyltransferase family GO:0016021|GO:0016765 GYO_2225 95978423240f58720956e53f0b468fe3 252 ProDom PD315856 ORF119 CPE0798 YOXB 8 244 5.0E-119 T 14-10-2018 IPR020530 Uncharacterised protein family, YoxB GYO_0476 6ad6e480e71bc60c06da776b9bba149a 246 Pfam PF00005 ABC transporter 22 165 3.7E-33 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 GYO_0476 6ad6e480e71bc60c06da776b9bba149a 246 SMART SM00382 30 222 2.9E-17 T 14-10-2018 IPR003593 AAA+ ATPase domain GYO_0476 6ad6e480e71bc60c06da776b9bba149a 246 ProSitePatterns PS00211 ABC transporters family signature. 138 152 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 GYO_0476 6ad6e480e71bc60c06da776b9bba149a 246 Gene3D G3DSA:3.40.50.300 1 243 1.1E-68 T 14-10-2018 GYO_0476 6ad6e480e71bc60c06da776b9bba149a 246 SUPERFAMILY SSF52540 2 228 1.11E-61 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase GYO_3632 1d4d970231f1e915f027329f6e6c3a79 51 Pfam PF12841 YvrJ protein family 12 46 1.1E-16 T 14-10-2018 IPR024419 Protein of unknown function YvrJ GYO_1378 75ba2c1eda2820dd0738a1729cdbc9db 307 Pfam PF08757 CotH kinase protein 40 108 1.2E-14 T 14-10-2018 IPR014867 Spore coat protein CotH GYO_1378 75ba2c1eda2820dd0738a1729cdbc9db 307 Pfam PF08757 CotH kinase protein 140 300 7.0E-13 T 14-10-2018 IPR014867 Spore coat protein CotH GYO_1951 056eb7b7e55eb78c65aa9aafbc577813 128 Pfam PF11068 YlqD protein 1 126 9.1E-36 T 14-10-2018 IPR021297 YlqD protein GYO_4137 4dd26f490a8c10243193d4076d0ad7d8 172 Pfam PF08741 YwhD family 6 166 9.3E-86 T 14-10-2018 IPR014852 Uncharacterised protein YwhD GYO_0371 5b7e20be34ee4813988461d6586373fb 208 Gene3D G3DSA:1.10.10.1320 7 95 1.0E-6 T 14-10-2018 GYO_0371 5b7e20be34ee4813988461d6586373fb 208 Pfam PF13490 Putative zinc-finger 3 38 4.7E-7 T 14-10-2018 IPR027383 Putative zinc-finger GYO_3210 c7404134a164b1998b8c0e160788e389 163 Pfam PF13185 GAF domain 53 161 2.9E-14 T 14-10-2018 IPR003018 GAF domain GO:0005515 GYO_3210 c7404134a164b1998b8c0e160788e389 163 Gene3D G3DSA:3.30.450.40 10 163 3.7E-65 T 14-10-2018 IPR029016 GAF-like domain superfamily GYO_3210 c7404134a164b1998b8c0e160788e389 163 SUPERFAMILY SSF55781 10 161 5.02E-44 T 14-10-2018 GYO_3210 c7404134a164b1998b8c0e160788e389 163 ProSitePatterns PS01320 Uncharacterized protein family UPF0067 signature. 100 117 - T 14-10-2018 IPR000614 Free Met sulfoxide reductase conserved site GYO_3210 c7404134a164b1998b8c0e160788e389 163 SMART SM00065 21 163 0.0026 T 14-10-2018 IPR003018 GAF domain GO:0005515 GYO_0541 26b5a73cc705143be08486ea2c01d41a 304 Hamap MF_01527_B GTP cyclohydrolase FolE2 [folE2]. 34 298 33.2 T 14-10-2018 IPR022838 GTP cyclohydrolase FolE2 GO:0003934|GO:0035998 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852 GYO_0541 26b5a73cc705143be08486ea2c01d41a 304 TIGRFAM TIGR00294 TIGR00294: GTP cyclohydrolase 2 304 1.3E-111 T 14-10-2018 IPR003801 GTP cyclohydrolase FolE2/MptA GO:0003933 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852 GYO_0541 26b5a73cc705143be08486ea2c01d41a 304 Pfam PF02649 Type I GTP cyclohydrolase folE2 34 293 4.4E-76 T 14-10-2018 IPR003801 GTP cyclohydrolase FolE2/MptA GO:0003933 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852 GYO_0541 26b5a73cc705143be08486ea2c01d41a 304 Gene3D G3DSA:3.10.270.10 31 298 1.4E-79 T 14-10-2018 GYO_1822 31204d2f014ed244c0aef9350157bf84 209 TIGRFAM TIGR02898 spore_YhcN_YlaJ: sporulation lipoprotein, YhcN/YlaJ family 3 161 1.9E-50 T 14-10-2018 IPR014247 Sporulation lipoprotein YhcN/YlaJ GO:0030435 GYO_1822 31204d2f014ed244c0aef9350157bf84 209 Pfam PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) 29 159 2.0E-17 T 14-10-2018 IPR019076 Sporulation lipoprotein YhcN/YlaJ-like GYO_1936 e7ad0db144cd402fc8426d6f0fd02539 300 Pfam PF03313 Serine dehydratase alpha chain 14 274 2.1E-78 T 14-10-2018 IPR005130 Serine dehydratase-like, alpha subunit GYO_1936 e7ad0db144cd402fc8426d6f0fd02539 300 TIGRFAM TIGR00718 sda_alpha: L-serine dehydratase, iron-sulfur-dependent, alpha subunit 1 300 1.1E-174 T 14-10-2018 IPR004642 Serine dehydratase, alpha subunit GO:0003941|GO:0006094 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17 GYO_1550 0484a8003042a920841584b3bee7a16b 154 Gene3D G3DSA:1.20.120.450 1 144 1.6E-40 T 14-10-2018 IPR034660 DinB/YfiT-like putative metalloenzymes GYO_1550 0484a8003042a920841584b3bee7a16b 154 SUPERFAMILY SSF109854 5 150 1.07E-32 T 14-10-2018 IPR034660 DinB/YfiT-like putative metalloenzymes GYO_1550 0484a8003042a920841584b3bee7a16b 154 Pfam PF05163 DinB family 5 151 1.2E-37 T 14-10-2018 IPR007837 DNA damage-inducible protein DinB GYO_1558 ad9aa94f83af020f009a2c62f0ce644f 200 Gene3D G3DSA:3.40.630.100 1 200 3.2E-61 T 14-10-2018 IPR038128 Poly-gamma-glutamate hydrolase superfamily GYO_1558 ad9aa94f83af020f009a2c62f0ce644f 200 Pfam PF05908 Poly-gamma-glutamate hydrolase 5 193 2.4E-70 T 14-10-2018 IPR008585 Poly-gamma-glutamate hydrolase GYO_0841 0e66e4198ffc3795f79bc6be7f5751e6 442 Pfam PF02378 Phosphotransferase system, EIIC 26 350 1.3E-75 T 14-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 GYO_0841 0e66e4198ffc3795f79bc6be7f5751e6 442 TIGRFAM TIGR00410 lacE: PTS system, lactose/cellobiose family IIC component 9 425 1.2E-189 T 14-10-2018 IPR004501 Phosphotransferase system, EIIC component, type 3 GO:0008982|GO:0009401|GO:0016021 GYO_0841 0e66e4198ffc3795f79bc6be7f5751e6 442 TIGRFAM TIGR00359 cello_pts_IIC: PTS system, cellobiose-specific IIC component 9 425 1.2E-189 T 14-10-2018 IPR004796 Phosphotransferase system, cellobiose-type IIC component GO:0008982|GO:0009401|GO:0016021 GYO_0841 0e66e4198ffc3795f79bc6be7f5751e6 442 PIRSF PIRSF006351 1 435 8.6E-145 T 14-10-2018 IPR004796 Phosphotransferase system, cellobiose-type IIC component GO:0008982|GO:0009401|GO:0016021 GYO_2612 28ab70c449b761fc6dd5108a49ba45e6 37 Pfam PF14164 YqzH-like protein 1 36 2.8E-11 T 14-10-2018 IPR025546 YqzH-like protein GYO_1593 5506f7083238df282fb4a187440b4b77 54 TIGRFAM TIGR01669 phage_XkdX: phage uncharacterized protein, XkdX family 11 53 4.5E-17 T 14-10-2018 IPR010022 Protein of unknown function XkdX GYO_1593 5506f7083238df282fb4a187440b4b77 54 Pfam PF09693 Phage uncharacterised protein (Phage_XkdX) 18 52 3.5E-9 T 14-10-2018 IPR010022 Protein of unknown function XkdX GYO_3486 3a0b01bff7da17abce604736c75d90ce 69 Pfam PF03621 MbtH-like protein 1 52 2.7E-27 T 14-10-2018 IPR005153 MbtH-like domain GYO_3486 3a0b01bff7da17abce604736c75d90ce 69 SMART SM00923 3 53 1.0E-27 T 14-10-2018 IPR005153 MbtH-like domain GYO_3486 3a0b01bff7da17abce604736c75d90ce 69 Gene3D G3DSA:3.90.820.10 1 69 2.6E-31 T 14-10-2018 GYO_3486 3a0b01bff7da17abce604736c75d90ce 69 SUPERFAMILY SSF160582 1 65 9.29E-29 T 14-10-2018 IPR038020 MbtH-like domain superfamily GYO_3677 4b8a8adf0231c535130b5172af142856 156 SUPERFAMILY SSF74982 4 132 7.19E-54 T 14-10-2018 IPR023620 Small protein B GYO_3677 4b8a8adf0231c535130b5172af142856 156 Hamap MF_00023 SsrA-binding protein [smpB]. 1 155 78.895 T 14-10-2018 IPR000037 SsrA-binding protein GO:0003723 GYO_3677 4b8a8adf0231c535130b5172af142856 156 ProSitePatterns PS01317 SsrA-binding protein. 27 39 - T 14-10-2018 IPR020081 SsrA-binding protein, conserved site GYO_3677 4b8a8adf0231c535130b5172af142856 156 Gene3D G3DSA:2.40.280.10 3 128 4.8E-52 T 14-10-2018 IPR023620 Small protein B GYO_3677 4b8a8adf0231c535130b5172af142856 156 TIGRFAM TIGR00086 smpB: SsrA-binding protein 9 149 1.3E-60 T 14-10-2018 IPR000037 SsrA-binding protein GO:0003723 GYO_3677 4b8a8adf0231c535130b5172af142856 156 Pfam PF01668 SmpB protein 10 150 7.4E-64 T 14-10-2018 IPR000037 SsrA-binding protein GO:0003723 GYO_3677 4b8a8adf0231c535130b5172af142856 156 ProDom PD004488 SSRA-BINDING RNA-BINDING SMPB SMALL B TMRNA-BINDING SSRA 3D-STRUCTURE HOMOLOG BINDING 11 132 5.0E-60 T 14-10-2018 IPR000037 SsrA-binding protein GO:0003723 GYO_2282 0a5ba98fad4099b5778c2e563b4892e9 210 SUPERFAMILY SSF55729 1 195 1.32E-17 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase GYO_2282 0a5ba98fad4099b5778c2e563b4892e9 210 Pfam PF13508 Acetyltransferase (GNAT) domain 120 183 2.5E-8 T 14-10-2018 IPR000182 GNAT domain GYO_2282 0a5ba98fad4099b5778c2e563b4892e9 210 Gene3D G3DSA:3.40.630.30 2 198 2.7E-21 T 14-10-2018 GYO_1113 a08f2d165502f497211d3b03cec473b6 333 Gene3D G3DSA:1.10.3470.10 6 332 1.3E-90 T 14-10-2018 IPR037294 ABC transporter, BtuC-like GYO_1113 a08f2d165502f497211d3b03cec473b6 333 Pfam PF01032 FecCD transport family 19 329 1.2E-92 T 14-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 GYO_1113 a08f2d165502f497211d3b03cec473b6 333 SUPERFAMILY SSF81345 6 329 9.02E-82 T 14-10-2018 IPR037294 ABC transporter, BtuC-like GYO_1690 067137e9fc87554ba045390a139343d3 106 Pfam PF06803 Protein of unknown function (DUF1232) 54 88 7.9E-9 T 14-10-2018 IPR010652 Domain of unknown function DUF1232 MetaCyc: PWY-7511 GYO_4465 05faae5ffcb42c35ff2125cfd82b5fba 46 Pfam PF14174 YycC-like protein 2 45 8.2E-24 T 14-10-2018 IPR025550 YycC-like protein GYO_3426 40ddff513f5c781f231dbaa79254f7cb 78 Pfam PF04070 Domain of unknown function (DUF378) 3 61 2.7E-27 T 14-10-2018 IPR007211 Protein of unknown function DUF378 GYO_2541 af2623b5258dc82a67df6cc152c7b090 333 ProDom PD136539 TRANSCRIPTION SIGMA-X NEGATIVE ACTIVITY RSIX REPRESSOR MEMBRANE EFFECTOR REGULATION REGULATOR 1 328 9.0E-143 T 14-10-2018 GYO_4221 3957ca6ec2ae9c76368b05db3920f96b 385 Gene3D G3DSA:1.20.1420.20 142 385 1.0E-85 T 14-10-2018 IPR038352 Imelysin-like domain superfamily GYO_4221 3957ca6ec2ae9c76368b05db3920f96b 385 Pfam PF09375 Imelysin 151 374 7.2E-31 T 14-10-2018 IPR018976 Imelysin-like domain GYO_2116 8a0e3831f2c03bce407022590d31b2f4 235 Gene3D G3DSA:2.60.120.180 28 232 1.6E-98 T 14-10-2018 IPR013319 Glycoside hydrolase family 11/12 GO:0004553 MetaCyc: PWY-6717|MetaCyc: PWY-6784 GYO_2116 8a0e3831f2c03bce407022590d31b2f4 235 ProSitePatterns PS00777 Glycosyl hydrolases family 11 (GH11) active site signature 2. 207 218 - T 14-10-2018 IPR033119 Glycoside hydrolase family 11, active site 2 MetaCyc: PWY-6717|MetaCyc: PWY-6784 GYO_2116 8a0e3831f2c03bce407022590d31b2f4 235 Pfam PF00457 Glycosyl hydrolases family 11 40 221 2.9E-68 T 14-10-2018 IPR033123 Glycosyl hydrolases family 11 (GH11) domain MetaCyc: PWY-6717|MetaCyc: PWY-6784 GYO_2116 8a0e3831f2c03bce407022590d31b2f4 235 SUPERFAMILY SSF49899 29 229 4.22E-84 T 14-10-2018 IPR013320 Concanavalin A-like lectin/glucanase domain superfamily GYO_2116 8a0e3831f2c03bce407022590d31b2f4 235 PRINTS PR00911 Glycosyl hydrolase family 11 signature 118 128 6.1E-18 T 14-10-2018 IPR001137 Glycoside hydrolase family 11 GO:0004553|GO:0005975 MetaCyc: PWY-6717|MetaCyc: PWY-6784 GYO_2116 8a0e3831f2c03bce407022590d31b2f4 235 PRINTS PR00911 Glycosyl hydrolase family 11 signature 144 150 6.1E-18 T 14-10-2018 IPR001137 Glycoside hydrolase family 11 GO:0004553|GO:0005975 MetaCyc: PWY-6717|MetaCyc: PWY-6784 GYO_2116 8a0e3831f2c03bce407022590d31b2f4 235 PRINTS PR00911 Glycosyl hydrolase family 11 signature 169 178 6.1E-18 T 14-10-2018 IPR001137 Glycoside hydrolase family 11 GO:0004553|GO:0005975 MetaCyc: PWY-6717|MetaCyc: PWY-6784 GYO_2116 8a0e3831f2c03bce407022590d31b2f4 235 PRINTS PR00911 Glycosyl hydrolase family 11 signature 108 117 6.1E-18 T 14-10-2018 IPR001137 Glycoside hydrolase family 11 GO:0004553|GO:0005975 MetaCyc: PWY-6717|MetaCyc: PWY-6784 GYO_2116 8a0e3831f2c03bce407022590d31b2f4 235 PRINTS PR00911 Glycosyl hydrolase family 11 signature 192 200 6.1E-18 T 14-10-2018 IPR001137 Glycoside hydrolase family 11 GO:0004553|GO:0005975 MetaCyc: PWY-6717|MetaCyc: PWY-6784 GYO_2116 8a0e3831f2c03bce407022590d31b2f4 235 PRINTS PR00911 Glycosyl hydrolase family 11 signature 164 169 6.1E-18 T 14-10-2018 IPR001137 Glycoside hydrolase family 11 GO:0004553|GO:0005975 MetaCyc: PWY-6717|MetaCyc: PWY-6784 GYO_2116 8a0e3831f2c03bce407022590d31b2f4 235 ProSitePatterns PS00776 Glycosyl hydrolases family 11 (GH11) active site signature 1. 118 128 - T 14-10-2018 IPR018208 Glycoside hydrolase family 11, active site 1 MetaCyc: PWY-6717|MetaCyc: PWY-6784 GYO_0513 2d5dc8cdfb44d9ce35bc0c82068f1f2c 209 Pfam PF01810 LysE type translocator 12 203 1.3E-53 T 14-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 GYO_0938 a35cd766f1199a714b47fa972b6f37f7 131 Pfam PF14112 Immunity protein 22 7 130 1.5E-25 T 14-10-2018 IPR025560 Immunity protein 22 GYO_4417 dcb9a85d9d30de7d63b0aa97cd171526 450 Pfam PF04230 Polysaccharide pyruvyl transferase 90 299 1.4E-17 T 14-10-2018 IPR007345 Polysaccharide pyruvyl transferase GYO_1574 54b23feb56d610aa97868b036f2d88ea 127 SUPERFAMILY SSF116915 1 125 1.57E-42 T 14-10-2018 IPR036558 YqbG-like superfamily GYO_1574 54b23feb56d610aa97868b036f2d88ea 127 Pfam PF11436 Protein of unknown function (DUF3199) 2 125 3.2E-55 T 14-10-2018 IPR013514 Protein of unknown function DUF3199, YqbG GYO_1574 54b23feb56d610aa97868b036f2d88ea 127 Gene3D G3DSA:1.10.3230.10 1 127 4.0E-47 T 14-10-2018 IPR036558 YqbG-like superfamily GYO_1855 3b146ad650d189ee431b0988e4503bbb 193 Gene3D G3DSA:1.10.10.60 8 83 3.6E-5 T 14-10-2018 GYO_1855 3b146ad650d189ee431b0988e4503bbb 193 TIGRFAM TIGR02894 DNA_bind_RsfA: transcription factor, RsfA family 4 88 4.7E-45 T 14-10-2018 IPR014243 Transcription factor, RsfA GYO_1855 3b146ad650d189ee431b0988e4503bbb 193 SUPERFAMILY SSF46689 7 62 4.91E-5 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 GYO_1855 3b146ad650d189ee431b0988e4503bbb 193 Pfam PF13921 Myb-like DNA-binding domain 9 62 2.6E-5 T 14-10-2018 GYO_0221 21f0b3037dcbb5b331f73222aadb9904 223 Pfam PF13643 Domain of unknown function (DUF4145) 108 202 3.9E-13 T 14-10-2018 IPR025285 Domain of unknown function DUF4145 GYO_0300 21f0b3037dcbb5b331f73222aadb9904 223 Pfam PF13643 Domain of unknown function (DUF4145) 108 202 3.9E-13 T 14-10-2018 IPR025285 Domain of unknown function DUF4145 GYO_1224 7428cb3e45a042ae69222f56244f43b4 107 Pfam PF13028 Protein of unknown function (DUF3889) 15 106 1.8E-31 T 14-10-2018 IPR024987 Protein of unknown function DUF3889 GYO_1224 7428cb3e45a042ae69222f56244f43b4 107 Gene3D G3DSA:3.10.450.390 25 106 1.3E-11 T 14-10-2018 GYO_0588 79c2fb2e1852d898f57727b1649bda5b 374 Pfam PF03845 Spore germination protein 5 325 1.6E-101 T 14-10-2018 IPR004761 Spore germination GerAB GO:0009847|GO:0016021 GYO_0588 79c2fb2e1852d898f57727b1649bda5b 374 TIGRFAM TIGR00912 2A0309: spore germination protein (amino acid permease) 5 361 2.0E-80 T 14-10-2018 IPR004761 Spore germination GerAB GO:0009847|GO:0016021 GYO_0568 cd965f2b6a190cd199dd7e20cd70fca5 312 SUPERFAMILY SSF103481 47 142 2.22E-9 T 14-10-2018 GYO_0568 cd965f2b6a190cd199dd7e20cd70fca5 312 Pfam PF00892 EamA-like transporter family 154 296 4.1E-20 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 GYO_0568 cd965f2b6a190cd199dd7e20cd70fca5 312 Pfam PF00892 EamA-like transporter family 9 141 4.3E-23 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 GYO_0568 cd965f2b6a190cd199dd7e20cd70fca5 312 SUPERFAMILY SSF103481 213 295 7.72E-10 T 14-10-2018 GYO_4104 6baaecf6f004c859927d6263cacb2715 209 Pfam PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 4 188 7.0E-32 T 14-10-2018 IPR003740 Uncharacterised membrane protein YitT GYO_1385 cab35b6e24e62f9aed702186b671957e 112 SUPERFAMILY SSF109854 1 90 7.51E-17 T 14-10-2018 IPR034660 DinB/YfiT-like putative metalloenzymes GYO_1385 cab35b6e24e62f9aed702186b671957e 112 Pfam PF05163 DinB family 1 100 6.7E-16 T 14-10-2018 IPR007837 DNA damage-inducible protein DinB GYO_1385 cab35b6e24e62f9aed702186b671957e 112 Gene3D G3DSA:1.20.120.450 1 112 2.0E-32 T 14-10-2018 IPR034660 DinB/YfiT-like putative metalloenzymes GYO_2608 f809f3c1b5441fef2847eeb8bfd2f670 113 Pfam PF03992 Antibiotic biosynthesis monooxygenase 13 85 3.7E-9 T 14-10-2018 IPR007138 Antibiotic biosynthesis monooxygenase domain GYO_2608 f809f3c1b5441fef2847eeb8bfd2f670 113 Gene3D G3DSA:3.30.70.100 11 103 7.6E-39 T 14-10-2018 GYO_2608 f809f3c1b5441fef2847eeb8bfd2f670 113 SUPERFAMILY SSF54909 6 105 4.6E-33 T 14-10-2018 IPR011008 Dimeric alpha-beta barrel GYO_3207 f24a1853ba324e761d83c04d7d80594a 567 Hamap MF_00728 Septation ring formation regulator EzrA [ezrA]. 1 563 22.419 T 14-10-2018 IPR010379 Septation ring formation regulator EzrA GO:0000921|GO:0005940|GO:0016021 GYO_3207 f24a1853ba324e761d83c04d7d80594a 567 Pfam PF06160 Septation ring formation regulator, EzrA 3 559 5.6E-170 T 14-10-2018 IPR010379 Septation ring formation regulator EzrA GO:0000921|GO:0005940|GO:0016021 GYO_3640 966d27178ff52aaf7aeaf44d7a5ee847 348 Pfam PF01032 FecCD transport family 34 343 5.2E-90 T 14-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 GYO_3640 966d27178ff52aaf7aeaf44d7a5ee847 348 Gene3D G3DSA:1.10.3470.10 20 347 1.8E-93 T 14-10-2018 IPR037294 ABC transporter, BtuC-like GYO_3640 966d27178ff52aaf7aeaf44d7a5ee847 348 SUPERFAMILY SSF81345 17 343 2.62E-83 T 14-10-2018 IPR037294 ABC transporter, BtuC-like GYO_2199 c48617afb04961df6226ead0f721dd7c 130 Pfam PF07098 Protein of unknown function (DUF1360) 11 108 1.8E-33 T 14-10-2018 IPR010773 Mycobacterium phage PG1, Gp7 GYO_2313 941c2a1cd434dca250556d161e39883a 178 Pfam PF04238 Protein of unknown function (DUF420) 46 174 1.1E-46 T 14-10-2018 IPR007352 Protein of unknown function DUF420 GYO_3446 602f4ba49d682b2a24847a9bd30d3ab8 319 Pfam PF02653 Branched-chain amino acid transport system / permease component 13 296 3.2E-40 T 14-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 GYO_4402 4687ff2bc91c6213feb085e1982f39e4 128 Pfam PF03788 LrgA family 12 102 8.3E-25 T 14-10-2018 IPR005538 LrgA/CidA family GO:0016021 GYO_3009 31690b2d661d9c30530819e870028e40 150 TIGRFAM TIGR04086 TIGR04086_membr: putative membrane protein, TIGR04086 family 31 143 6.9E-28 T 14-10-2018 IPR023804 Protein of unknown function DUF3792, transmembrane GYO_3009 31690b2d661d9c30530819e870028e40 150 Pfam PF12670 Protein of unknown function (DUF3792) 30 140 1.1E-21 T 14-10-2018 IPR023804 Protein of unknown function DUF3792, transmembrane GYO_0350 2d6c39294eed626ccf7e0f9581971b04 319 Pfam PF01758 Sodium Bile acid symporter family 44 211 2.0E-18 T 14-10-2018 IPR002657 Bile acid:sodium symporter/arsenical resistance protein Acr3 GO:0016020 GYO_0350 2d6c39294eed626ccf7e0f9581971b04 319 Gene3D G3DSA:1.20.1530.20 8 313 6.3E-59 T 14-10-2018 IPR038770 Sodium/solute symporter superfamily GYO_0384 79e35a7eab614ee7a832c2f014488c51 171 SUPERFAMILY SSF48371 22 114 2.49E-10 T 14-10-2018 IPR016024 Armadillo-type fold GYO_0384 79e35a7eab614ee7a832c2f014488c51 171 Gene3D G3DSA:1.25.10.10 1 169 1.3E-14 T 14-10-2018 IPR011989 Armadillo-like helical GYO_0384 79e35a7eab614ee7a832c2f014488c51 171 Pfam PF13646 HEAT repeats 38 109 2.0E-6 T 14-10-2018 GYO_3957 44111a81a92920934d94a7880e6d9863 108 Pfam PF13031 Protein of unknown function (DUF3892) 39 106 5.5E-15 T 14-10-2018 IPR024997 Protein of unknown function DUF3892 GYO_1612 2b722865e98ef916fdd589b903e8ebe3 308 Gene3D G3DSA:1.10.3720.10 83 300 2.0E-23 T 14-10-2018 IPR035906 MetI-like superfamily GYO_1612 2b722865e98ef916fdd589b903e8ebe3 308 SUPERFAMILY SSF161098 88 286 2.88E-21 T 14-10-2018 IPR035906 MetI-like superfamily GYO_1612 2b722865e98ef916fdd589b903e8ebe3 308 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 112 303 2.4E-40 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 GYO_2768 a9e77ba26a70c4f47cad219a12d4e24f 160 Pfam PF04306 Protein of unknown function (DUF456) 21 158 9.6E-39 T 14-10-2018 IPR007403 Protein of unknown function DUF456 GYO_1464 7900edcdfa767e1d2251260790cb88e7 121 Hamap MF_01861 UPF0738 protein . 3 121 28.573 T 14-10-2018 IPR020908 Uncharacterised protein family UPF0738 GYO_0803 efb4b0cba845842071010c213af69e85 111 Pfam PF13564 DoxX-like family 2 102 1.7E-20 T 14-10-2018 IPR032808 DoxX family GYO_2969 9c3113910237104a561f1c5082b7cdc6 67 Pfam PF10750 Protein of unknown function (DUF2536) 1 65 4.7E-35 T 14-10-2018 IPR019686 Protein of unknown function DUF2536 GYO_4292 5035fd5d41e75287995bccb0ae6cf2a9 157 ProDom PD093362 MEMBRANE UNCHARACTERIZED YXJN HOMOLOG B.SUBTILIS PROTEIN TRANSMEMBRANE 17 149 3.0E-54 T 14-10-2018 IPR020223 Uncharacterised protein YxjN GYO_4292 5035fd5d41e75287995bccb0ae6cf2a9 157 Pfam PF07301 Protein of unknown function (DUF1453) 7 149 1.7E-7 T 14-10-2018 IPR009916 Protein of unknown function DUF1453 GYO_0980 fc8fa95f04612c437d49f599fa38182e 214 Pfam PF01027 Inhibitor of apoptosis-promoting Bax1 12 207 6.6E-36 T 14-10-2018 IPR006214 Bax inhibitor 1-related GYO_1383 47d63680d6cdca969acad185b3f3bf48 185 ProDom PD106196 YISN IG BH1722 2 175 6.0E-95 T 14-10-2018 IPR024488 Protein of unknown function DUF2777 GYO_1383 47d63680d6cdca969acad185b3f3bf48 185 Pfam PF10949 Protein of unknown function (DUF2777) 2 177 1.6E-67 T 14-10-2018 IPR024488 Protein of unknown function DUF2777 GYO_0383 4e08856720f5af4081d0c5f0f90a7368 390 Pfam PF07690 Major Facilitator Superfamily 10 311 1.0E-35 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 GYO_0383 4e08856720f5af4081d0c5f0f90a7368 390 Gene3D G3DSA:1.20.1250.20 2 378 6.7E-45 T 14-10-2018 GYO_0383 4e08856720f5af4081d0c5f0f90a7368 390 SUPERFAMILY SSF103473 5 388 8.76E-57 T 14-10-2018 IPR036259 MFS transporter superfamily GYO_2726 ef75e8a1f8e85ff1b7590197c05fb8b4 59 Pfam PF14038 YqzE-like protein 2 54 5.9E-30 T 14-10-2018 IPR025622 YqzE-like protein GYO_2975 2fb732ab10f9e5b0d8cdbbbdc734f1d2 309 Pfam PF01136 Peptidase family U32 76 306 2.2E-67 T 14-10-2018 IPR001539 Peptidase U32 GO:0006508|GO:0008233 GYO_0765 430cd7bf24f3d61f970c921c661d0776 276 Gene3D G3DSA:3.20.20.370 41 272 8.8E-54 T 14-10-2018 GYO_0765 430cd7bf24f3d61f970c921c661d0776 276 SUPERFAMILY SSF88713 78 268 5.56E-46 T 14-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 GYO_0765 430cd7bf24f3d61f970c921c661d0776 276 Pfam PF01522 Polysaccharide deacetylase 77 181 3.4E-26 T 14-10-2018 IPR002509 NodB homology domain GO:0005975|GO:0016810 GYO_2403 390ace307cbbe0fd11493bc1269a1390 206 SUPERFAMILY SSF69593 11 142 8.89E-5 T 14-10-2018 GYO_1946 c9fe0f1855d12dd03081764ed58b04e5 161 SUPERFAMILY SSF49464 64 131 2.67E-8 T 14-10-2018 IPR008969 Carboxypeptidase-like, regulatory domain superfamily GYO_1946 c9fe0f1855d12dd03081764ed58b04e5 161 Gene3D G3DSA:2.60.40.10 59 130 3.6E-8 T 14-10-2018 IPR013783 Immunoglobulin-like fold GYO_3469 2fdcddc01486ea4fc55eeb6dbb38b04d 82 ProDom PD060056 YUEH 1 82 7.0E-41 T 14-10-2018 IPR020260 Uncharacterised protein family YueH GYO_3469 2fdcddc01486ea4fc55eeb6dbb38b04d 82 Pfam PF14166 YueH-like protein 2 81 1.2E-32 T 14-10-2018 IPR020260 Uncharacterised protein family YueH GYO_3048 17942352a129641c25307d9940c50250 332 Gene3D G3DSA:3.30.70.1070 180 247 3.3E-8 T 14-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 GYO_3048 17942352a129641c25307d9940c50250 332 Pfam PF05036 Sporulation related domain 179 234 2.2E-9 T 14-10-2018 IPR007730 Sporulation-like domain GO:0042834 GYO_3048 17942352a129641c25307d9940c50250 332 SUPERFAMILY SSF110997 179 242 6.41E-9 T 14-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 GYO_3197 799bd816bd89ed176182300810ba6195 164 Pfam PF06271 RDD family 26 153 2.0E-21 T 14-10-2018 IPR010432 RDD GYO_1836 cd20e1e5b276922d58e9697c19b8e69a 110 TIGRFAM TIGR02908 CoxD_Bacillus: cytochrome c oxidase, subunit IVB 1 110 1.2E-58 T 14-10-2018 IPR014257 Cytochrome c oxidase, subunit IV bacillaceae KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279 GYO_1836 cd20e1e5b276922d58e9697c19b8e69a 110 Pfam PF03626 Prokaryotic Cytochrome C oxidase subunit IV 30 101 6.1E-14 T 14-10-2018 IPR005171 Cytochrome C oxidase subunit IV, prokaryotes GO:0016021 GYO_0125 93ee74a05edb896481f5d61c0c0c961e 170 Pfam PF05991 YacP-like NYN domain 4 166 6.2E-56 T 14-10-2018 IPR010298 Protein of unknown function DUF901 GYO_3771 f542691782e78c492b5a967999fbd56f 234 Pfam PF02706 Chain length determinant protein 4 93 9.0E-18 T 14-10-2018 IPR003856 Polysaccharide chain length determinant N-terminal domain GO:0009103|GO:0016020 GYO_3941 df98328157dc0d0e1ff04e53ccb23a1b 374 Pfam PF05504 Spore germination B3/ GerAC like, C-terminal 204 370 1.1E-37 T 14-10-2018 IPR008844 Spore germination GerAC GO:0009847|GO:0016020 GYO_3941 df98328157dc0d0e1ff04e53ccb23a1b 374 TIGRFAM TIGR02887 spore_ger_x_C: germination protein, Ger(x)C family 4 372 1.6E-108 T 14-10-2018 IPR008844 Spore germination GerAC GO:0009847|GO:0016020 GYO_3941 df98328157dc0d0e1ff04e53ccb23a1b 374 Gene3D G3DSA:3.30.300.210 221 374 9.8E-56 T 14-10-2018 IPR038501 Spore germination GerAC superfamily GYO_3941 df98328157dc0d0e1ff04e53ccb23a1b 374 Gene3D G3DSA:3.10.450.290 25 91 4.3E-40 T 14-10-2018 GYO_3327 b6f4786fe45c32dd4a7a375be0a13dc8 52 Pfam PF07561 Domain of Unknown Function (DUF1540) 5 47 2.5E-16 T 14-10-2018 IPR011437 Domain of unknown function DUF1540 GYO_1592 46d14a0515d365ac741b9df4a59e6266 108 Pfam PF09636 XkdW protein 2 105 3.8E-52 T 14-10-2018 IPR019094 Bacteriophage SP-beta, YorD GYO_1592 46d14a0515d365ac741b9df4a59e6266 108 Gene3D G3DSA:3.30.56.60 1 59 1.5E-29 T 14-10-2018 IPR035950 XkdW-like superfamily GYO_1592 46d14a0515d365ac741b9df4a59e6266 108 SUPERFAMILY SSF159865 2 59 2.48E-24 T 14-10-2018 IPR035950 XkdW-like superfamily GYO_2665 d84ba0fdc88a4b9a2ed848de77248190 204 SUPERFAMILY SSF53187 28 203 5.34E-55 T 14-10-2018 GYO_2665 d84ba0fdc88a4b9a2ed848de77248190 204 Pfam PF01520 N-acetylmuramoyl-L-alanine amidase 30 199 4.0E-56 T 14-10-2018 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 GYO_2665 d84ba0fdc88a4b9a2ed848de77248190 204 SMART SM00646 88 199 9.1E-51 T 14-10-2018 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 GYO_2665 d84ba0fdc88a4b9a2ed848de77248190 204 Gene3D G3DSA:3.40.630.40 26 204 2.4E-64 T 14-10-2018 GYO_1048 bed7b14acafcaa200988618c0ed8bb89 221 SUPERFAMILY SSF55469 8 220 8.51E-56 T 14-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 GYO_1048 bed7b14acafcaa200988618c0ed8bb89 221 Gene3D G3DSA:3.40.109.10 3 221 1.5E-62 T 14-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 GYO_1048 bed7b14acafcaa200988618c0ed8bb89 221 Pfam PF00881 Nitroreductase family 14 201 3.5E-26 T 14-10-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 GYO_2161 f4944fed5d5f1a28a442bfcc118786ab 235 Pfam PF02683 Cytochrome C biogenesis protein transmembrane region 9 214 7.2E-75 T 14-10-2018 IPR003834 Cytochrome C biogenesis protein, transmembrane domain GO:0016020|GO:0017004|GO:0055114 GYO_3141 74cd056d96d0663e446f9123f36e59f5 146 Hamap MF_01141 Antiholin-like protein LrgA [lrgA]. 1 136 29.749 T 14-10-2018 IPR023736 Antiholin-like protein LrgA GYO_3141 74cd056d96d0663e446f9123f36e59f5 146 Pfam PF03788 LrgA family 21 112 1.2E-23 T 14-10-2018 IPR005538 LrgA/CidA family GO:0016021 GYO_1589 a309af42c1603af890a6daf150411c3f 192 Pfam PF10076 Uncharacterised protein conserved in bacteria (DUF2313) 5 148 9.9E-33 T 14-10-2018 IPR018755 Bacteriophage Mu-like, Gp48 GYO_2776 6aa4be95e2cbdec7bf76c989fb63cce1 84 Pfam PF11116 Protein of unknown function (DUF2624) 1 83 5.3E-32 T 14-10-2018 IPR020277 Protein of unknown function DUF2624 GYO_2776 6aa4be95e2cbdec7bf76c989fb63cce1 84 ProDom PD060869 YQFT IG BH1387 1 68 1.0E-30 T 14-10-2018 IPR020277 Protein of unknown function DUF2624 GYO_0951 67a440b84e3661ca7688f44e873f93f3 100 Pfam PF12652 CotJB protein 25 99 1.4E-27 T 14-10-2018 IPR024207 Spore coat assembly protein CotJB, domain GYO_0951 67a440b84e3661ca7688f44e873f93f3 100 PIRSF PIRSF010606 12 100 3.1E-45 T 14-10-2018 IPR016571 Spore coat assembly protein CotJB GYO_0529 0080a6589f1901ca3617507ec0f7ec0b 411 Gene3D G3DSA:1.10.10.2840 280 411 5.1E-19 T 14-10-2018 GYO_0529 0080a6589f1901ca3617507ec0f7ec0b 411 Pfam PF13556 PucR C-terminal helix-turn-helix domain 349 406 1.3E-19 T 14-10-2018 IPR025736 PucR C-terminal helix-turn-helix domain GYO_2759 8c49f4970adb2949fbaa5107d865c30c 154 Gene3D G3DSA:1.10.8.1150 87 154 5.4E-13 T 14-10-2018 GYO_2759 8c49f4970adb2949fbaa5107d865c30c 154 Pfam PF02618 YceG-like family 93 153 1.6E-7 T 14-10-2018 IPR003770 Endolytic murein transglycosylase GYO_2009 dd888355dcfa0c6b20aeb6020c7151bf 266 ProSitePatterns PS01315 Phosphatidate cytidylyltransferase signature. 223 249 - T 14-10-2018 IPR000374 Phosphatidate cytidylyltransferase GO:0016020|GO:0016772 KEGG: 00564+2.7.7.41|KEGG: 04070+2.7.7.41|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7817 GYO_2009 dd888355dcfa0c6b20aeb6020c7151bf 266 Pfam PF01148 Cytidylyltransferase family 2 265 4.6E-75 T 14-10-2018 GYO_1462 e35a2aa6cdd467d7f5df3f4cf2a77fc8 245 ProSitePatterns PS00922 Prokaryotic transglycosylases signature. 145 173 - T 14-10-2018 IPR000189 Prokaryotic transglycosylase, active site GO:0000270|GO:0008933|GO:0016020 GYO_1462 e35a2aa6cdd467d7f5df3f4cf2a77fc8 245 Pfam PF01464 Transglycosylase SLT domain 127 234 4.7E-34 T 14-10-2018 IPR008258 Transglycosylase SLT domain 1 GYO_1462 e35a2aa6cdd467d7f5df3f4cf2a77fc8 245 Gene3D G3DSA:1.10.530.10 82 245 1.8E-52 T 14-10-2018 GYO_1462 e35a2aa6cdd467d7f5df3f4cf2a77fc8 245 SUPERFAMILY SSF53955 123 243 1.55E-48 T 14-10-2018 IPR023346 Lysozyme-like domain superfamily GYO_3726 fad8d948fae20a5f1f34d9d49e1021db 305 SUPERFAMILY SSF103481 42 143 2.48E-15 T 14-10-2018 GYO_3726 fad8d948fae20a5f1f34d9d49e1021db 305 SUPERFAMILY SSF103481 190 290 4.58E-11 T 14-10-2018 GYO_3726 fad8d948fae20a5f1f34d9d49e1021db 305 Pfam PF00892 EamA-like transporter family 10 140 7.3E-28 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 GYO_3726 fad8d948fae20a5f1f34d9d49e1021db 305 Pfam PF00892 EamA-like transporter family 151 286 4.1E-23 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 GYO_2769 bf16a7cbbd450877a043b8ce5878b979 255 Pfam PF06691 Protein of unknown function (DUF1189) 4 243 5.3E-71 T 14-10-2018 IPR009574 Protein of unknown function DUF1189 GYO_3182 a0473bc61b80712275da78e841544e6c 100 Pfam PF14007 YtpI-like protein 5 90 2.7E-33 T 14-10-2018 IPR025618 YtpI-like protein GYO_3471 632bc325d538d42c8edc978522a221b8 369 Pfam PF01594 AI-2E family transporter 18 348 9.1E-93 T 14-10-2018 IPR002549 Transmembrane protein TqsA-like GYO_3996 b7036fec4325f07c3010f196f6911fcc 151 Pfam PF14183 YwpF-like protein 17 150 1.7E-48 T 14-10-2018 IPR025573 YwpF-like protein GYO_1748 07723a7d9b7eb0c88f99196c283c70d7 147 Gene3D G3DSA:3.10.580.10 1 147 2.2E-63 T 14-10-2018 GYO_1748 07723a7d9b7eb0c88f99196c283c70d7 147 SUPERFAMILY SSF54631 13 140 2.48E-28 T 14-10-2018 GYO_1872 629e883321bc14e3a6d9fa0f303a3432 235 Gene3D G3DSA:3.30.70.1880 84 235 2.3E-16 T 14-10-2018 GYO_1872 629e883321bc14e3a6d9fa0f303a3432 235 Pfam PF05949 Bacterial protein of unknown function (DUF881) 86 230 7.3E-27 T 14-10-2018 IPR010273 Protein of unknown function DUF881 GYO_1396 b0a8112265f7bb754eba2d9a7e25562e 268 PRINTS PR00412 Epoxide hydrolase signature 28 46 6.7E-7 T 14-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 GYO_1396 b0a8112265f7bb754eba2d9a7e25562e 268 PRINTS PR00412 Epoxide hydrolase signature 243 265 6.7E-7 T 14-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 GYO_1396 b0a8112265f7bb754eba2d9a7e25562e 268 PRINTS PR00412 Epoxide hydrolase signature 48 63 6.7E-7 T 14-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 GYO_1396 b0a8112265f7bb754eba2d9a7e25562e 268 Gene3D G3DSA:3.40.50.1820 1 267 4.5E-78 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold GYO_1396 b0a8112265f7bb754eba2d9a7e25562e 268 SUPERFAMILY SSF53474 3 265 3.59E-62 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold GYO_1396 b0a8112265f7bb754eba2d9a7e25562e 268 PRINTS PR00111 Alpha/beta hydrolase fold signature 212 226 1.9E-12 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 GYO_1396 b0a8112265f7bb754eba2d9a7e25562e 268 PRINTS PR00111 Alpha/beta hydrolase fold signature 92 105 1.9E-12 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 GYO_1396 b0a8112265f7bb754eba2d9a7e25562e 268 PRINTS PR00111 Alpha/beta hydrolase fold signature 48 63 1.9E-12 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 GYO_1396 b0a8112265f7bb754eba2d9a7e25562e 268 Pfam PF00561 alpha/beta hydrolase fold 23 254 2.8E-26 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 GYO_3558 4f4fcbffcbf1b046f349bb5f7b9e14a5 300 SUPERFAMILY SSF161098 31 300 2.09E-74 T 14-10-2018 IPR035906 MetI-like superfamily GYO_3558 4f4fcbffcbf1b046f349bb5f7b9e14a5 300 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 110 293 2.1E-14 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 GYO_3558 4f4fcbffcbf1b046f349bb5f7b9e14a5 300 Gene3D G3DSA:1.10.3720.10 23 291 5.2E-65 T 14-10-2018 IPR035906 MetI-like superfamily GYO_3826 66ae417398c6f27d98b557cd43741d21 212 Hamap MF_00278 Imidazole glycerol phosphate synthase subunit HisH [hisH]. 1 204 36.312 T 14-10-2018 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 GYO_3826 66ae417398c6f27d98b557cd43741d21 212 SUPERFAMILY SSF52317 2 204 4.86E-52 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like GYO_3826 66ae417398c6f27d98b557cd43741d21 212 Gene3D G3DSA:3.40.50.880 1 212 7.6E-71 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like GYO_3826 66ae417398c6f27d98b557cd43741d21 212 PIRSF PIRSF000495 1 207 5.5E-74 T 14-10-2018 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 GYO_3826 66ae417398c6f27d98b557cd43741d21 212 TIGRFAM TIGR01855 IMP_synth_hisH: imidazole glycerol phosphate synthase, glutamine amidotransferase subunit 2 204 2.3E-71 T 14-10-2018 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 GYO_3826 66ae417398c6f27d98b557cd43741d21 212 Pfam PF00117 Glutamine amidotransferase class-I 4 201 2.6E-19 T 14-10-2018 IPR017926 Glutamine amidotransferase GYO_2979 861f1f68099f50b8a602f891540fc96f 93 Hamap MF_01448 UPF0473 protein . 4 89 22.33 T 14-10-2018 IPR009711 Uncharacterised protein family UPF0473 GYO_2979 861f1f68099f50b8a602f891540fc96f 93 Pfam PF06949 Protein of unknown function (DUF1292) 13 87 2.1E-18 T 14-10-2018 IPR009711 Uncharacterised protein family UPF0473 GYO_0899 65ce621039cbf71d48a0d270ca97eb31 55 Pfam PF13076 Fur-regulated basic protein A 12 47 6.1E-13 T 14-10-2018 IPR025072 Fur-regulated basic protein A GYO_0033 a400790cb9f864427407217d4b355d42 64 Pfam PF10764 Inhibitor of sigma-G Gin 11 55 2.3E-20 T 14-10-2018 IPR019700 Anti-sigma-G factor Gin GYO_3417 d63bd5e9e2570364c4d36a14547c4725 225 Pfam PF04298 Putative neutral zinc metallopeptidase 4 218 1.0E-88 T 14-10-2018 IPR007395 Putative neutral zinc metallopeptidase GYO_3294 e661f8bf33e790b258e78461be826894 325 PRINTS PR02026 YtrC/YtrD probable ABC transporter permease signature 171 183 4.9E-40 T 14-10-2018 IPR023264 ABC transporter, acetoin utilisation, predicted permease Ytrc/YtrD GYO_3294 e661f8bf33e790b258e78461be826894 325 PRINTS PR02026 YtrC/YtrD probable ABC transporter permease signature 154 168 4.9E-40 T 14-10-2018 IPR023264 ABC transporter, acetoin utilisation, predicted permease Ytrc/YtrD GYO_3294 e661f8bf33e790b258e78461be826894 325 PRINTS PR02026 YtrC/YtrD probable ABC transporter permease signature 238 252 4.9E-40 T 14-10-2018 IPR023264 ABC transporter, acetoin utilisation, predicted permease Ytrc/YtrD GYO_3294 e661f8bf33e790b258e78461be826894 325 PRINTS PR02026 YtrC/YtrD probable ABC transporter permease signature 258 277 4.9E-40 T 14-10-2018 IPR023264 ABC transporter, acetoin utilisation, predicted permease Ytrc/YtrD GYO_3294 e661f8bf33e790b258e78461be826894 325 PRINTS PR02026 YtrC/YtrD probable ABC transporter permease signature 94 108 4.9E-40 T 14-10-2018 IPR023264 ABC transporter, acetoin utilisation, predicted permease Ytrc/YtrD GYO_1481 07983cc8ed303aaf7098428ff49070e7 172 Pfam PF07552 Spore Coat Protein X and V domain 51 107 3.1E-17 T 14-10-2018 IPR011428 Spore coat protein X/V GO:0030435|GO:0031160 GYO_1481 07983cc8ed303aaf7098428ff49070e7 172 Pfam PF07552 Spore Coat Protein X and V domain 114 169 3.0E-16 T 14-10-2018 IPR011428 Spore coat protein X/V GO:0030435|GO:0031160 GYO_2930 c065fef4d4a167b4999d41abb9e4a651 99 Pfam PF07875 Coat F domain 15 76 2.5E-24 T 14-10-2018 IPR012851 Spore coat protein CotF-like GYO_3104 f3b5d867885a2834b66bdaa5d84cb632 134 Pfam PF03994 Domain of Unknown Function (DUF350) 80 134 4.6E-16 T 14-10-2018 IPR007140 Protein of unknown function DUF350 GYO_3104 f3b5d867885a2834b66bdaa5d84cb632 134 Pfam PF03994 Domain of Unknown Function (DUF350) 15 68 1.5E-13 T 14-10-2018 IPR007140 Protein of unknown function DUF350 GYO_0667 3bda84da87752808c03bec94c77d4baa 350 Pfam PF01594 AI-2E family transporter 15 334 1.2E-62 T 14-10-2018 IPR002549 Transmembrane protein TqsA-like GYO_0970 08e7cc80deabaf737e4ecb5bd846f659 502 Gene3D G3DSA:3.40.190.10 58 415 3.6E-70 T 14-10-2018 GYO_0970 08e7cc80deabaf737e4ecb5bd846f659 502 Gene3D G3DSA:3.40.190.10 152 498 3.6E-70 T 14-10-2018 GYO_0970 08e7cc80deabaf737e4ecb5bd846f659 502 SUPERFAMILY SSF53850 21 500 9.78E-97 T 14-10-2018 GYO_0970 08e7cc80deabaf737e4ecb5bd846f659 502 Pfam PF01547 Bacterial extracellular solute-binding protein 58 362 3.1E-32 T 14-10-2018 IPR006059 Bacterial extracellular solute-binding protein GYO_1135 e3d6ca5afc9cea745cc9eadfdce37c31 86 Pfam PF14182 YgaB-like protein 3 78 2.2E-36 T 14-10-2018 IPR025572 YgaB-like protein GYO_0027 d61a57e60838a6046ef7f6a5578dfeae 74 Pfam PF10704 Protein of unknown function (DUF2508) 4 69 6.3E-24 T 14-10-2018 IPR019644 Protein of unknown function DUF2508 GYO_3926 87ae83652e58b5a74c82e08bbf10a28b 436 Gene3D G3DSA:2.60.120.260 275 435 2.6E-8 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily GYO_3962 9f5a6ce40dbe84bbf7e9694114aba385 363 Pfam PF08757 CotH kinase protein 47 355 5.6E-89 T 14-10-2018 IPR014867 Spore coat protein CotH GYO_1240 e11d9736c6ff919bc221f9dfd92844d2 357 Pfam PF13800 Sigma factor regulator N-terminal 59 153 3.9E-22 T 14-10-2018 IPR029101 Sigma factor regulator, N-terminal GYO_1240 e11d9736c6ff919bc221f9dfd92844d2 357 Pfam PF13791 Sigma factor regulator C-terminal 205 351 2.0E-38 T 14-10-2018 IPR025672 Sigma factor regulator C-terminal domain GYO_0173 068fa0de07041575a483a625ec6b9631 265 Pfam PF02361 Cobalt transport protein 14 237 1.1E-64 T 14-10-2018 IPR003339 ABC/ECF transporter, transmembrane component GYO_0173 068fa0de07041575a483a625ec6b9631 265 Hamap MF_01461 Energy-coupling factor transporter transmembrane protein EcfT [ecfT]. 2 265 38.695 T 14-10-2018 IPR024919 ECF transporter transmembrane protein EcfT GO:0016021|GO:0022857|GO:0055085 GYO_1660 3b89199c6deb6523c000fc73fddcc15d 183 ProDom PD102989 YKOP PLASMID 1 182 7.0E-93 T 14-10-2018 GYO_0638 1bec9727a881428962a9173328d5f777 169 Gene3D G3DSA:2.60.120.10 1 169 2.2E-69 T 14-10-2018 IPR014710 RmlC-like jelly roll fold GYO_0638 1bec9727a881428962a9173328d5f777 169 SUPERFAMILY SSF51182 49 160 8.25E-11 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily GYO_0166 608809e732b4bd5a9ebf3fc55cc4543b 37 Hamap MF_00251 50S ribosomal protein L36 [rpmJ]. 1 37 17.611 T 14-10-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 GYO_0166 608809e732b4bd5a9ebf3fc55cc4543b 37 Pfam PF00444 Ribosomal protein L36 1 37 3.2E-19 T 14-10-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 GYO_0166 608809e732b4bd5a9ebf3fc55cc4543b 37 TIGRFAM TIGR01022 rpmJ_bact: ribosomal protein bL36 1 37 5.8E-24 T 14-10-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 GYO_0166 608809e732b4bd5a9ebf3fc55cc4543b 37 ProSitePatterns PS00828 Ribosomal protein L36 signature. 11 36 - T 14-10-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 GYO_0166 608809e732b4bd5a9ebf3fc55cc4543b 37 ProDom PD002101 RIBOSOMAL L36 RIBONUCLEOPROTEIN 50S CHLOROPLAST PLASTID B SUBUNIT DIRECT SEQUENCING 10 37 2.0E-8 T 14-10-2018 GYO_0166 608809e732b4bd5a9ebf3fc55cc4543b 37 SUPERFAMILY SSF57840 1 37 6.28E-17 T 14-10-2018 IPR035977 Ribosomal protein L36 superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 GYO_2504 a9383c3b8d22b065153650145acfa3c2 251 Pfam PF07307 Heptaprenyl diphosphate synthase (HEPPP synthase) subunit 1 21 196 1.5E-74 T 14-10-2018 IPR009920 Heptaprenyl diphosphate synthase subunit 1 GO:0009234 KEGG: 00900+2.5.1.30|MetaCyc: PWY-5807 GYO_0065 49794dd74d9bd8d89bf94b2fa2ea4e9c 76 Pfam PF10955 Protein of unknown function (DUF2757) 1 76 2.8E-37 T 14-10-2018 IPR020115 Anti-sigma-F factor Fin GO:0010468 GYO_0065 49794dd74d9bd8d89bf94b2fa2ea4e9c 76 ProDom PD057826 YABK 4 76 4.0E-36 T 14-10-2018 IPR020115 Anti-sigma-F factor Fin GO:0010468 GYO_0881 22ac87aba42916ae285ae166af7a6792 123 Pfam PF03330 Lytic transglycolase 31 118 1.5E-9 T 14-10-2018 IPR009009 RlpA-like protein, double-psi beta-barrel domain GYO_2185 c7f8538e604a50741191f7afadea72ec 134 Pfam PF04138 GtrA-like protein 11 124 4.5E-29 T 14-10-2018 IPR007267 GtrA-like protein GO:0000271|GO:0016021 GYO_0784 a2c7fe6a15f859bb972cbcc2d23955ba 229 Pfam PF04474 Protein of unknown function (DUF554) 2 219 1.3E-65 T 14-10-2018 IPR007563 Protein of unknown function DUF554 GYO_0524 180e5369043ba16870d974fb2236b0aa 260 Pfam PF10127 Predicted nucleotidyltransferase 1 248 6.4E-100 T 14-10-2018 IPR018775 Nucleotidyltransferase, predicted GYO_1982 b182d828a5bddea69106fe6fb3470049 140 Pfam PF03963 Flagellar hook capping protein - N-terminal region 12 72 5.8E-23 T 14-10-2018 IPR005648 Flagellar hook capping protein GYO_0233 e6db8afb8db11682a3c354cc360ae0b1 145 ProDom PD033466 XKDJ PHAGE PHAGE-LIKE PBSX RELATED LIN1276 ELEMENT YQBJ 1 145 6.0E-71 T 14-10-2018 GYO_0312 e6db8afb8db11682a3c354cc360ae0b1 145 ProDom PD033466 XKDJ PHAGE PHAGE-LIKE PBSX RELATED LIN1276 ELEMENT YQBJ 1 145 6.0E-71 T 14-10-2018 GYO_0542 538d7434667346c74281d8fcf20584d2 194 Gene3D G3DSA:2.40.440.10 66 194 2.5E-28 T 14-10-2018 IPR038063 L,D-transpeptidase catalytic domain-like GYO_0542 538d7434667346c74281d8fcf20584d2 194 SUPERFAMILY SSF141523 66 193 1.83E-24 T 14-10-2018 IPR038063 L,D-transpeptidase catalytic domain-like GYO_0542 538d7434667346c74281d8fcf20584d2 194 Pfam PF03734 L,D-transpeptidase catalytic domain 69 193 1.5E-18 T 14-10-2018 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 GYO_0480 b32df3a8e0d9fdcd0b4e748b2fda8a58 471 Pfam PF16244 Domain of unknown function (DUF4901) 14 230 1.6E-21 T 14-10-2018 IPR032599 Protein of unknown function DUF4901 GYO_3257 34e6912649a1619fb0720f631572baa0 222 Pfam PF04854 Protein of unknown function, DUF624 20 96 3.4E-32 T 14-10-2018 IPR006938 Protein of unknown function DUF624 GYO_4074 76ec53e868f2f3885b54aa7515219f2c 120 Pfam PF17094 Uncharacterised protein family (UPF0715) 3 115 2.6E-43 T 14-10-2018 IPR031374 Uncharacterised protein family UPF0715 GYO_4074 76ec53e868f2f3885b54aa7515219f2c 120 ProDom PD015812 YOPD YWLA YOAG 3 116 2.0E-44 T 14-10-2018 IPR031374 Uncharacterised protein family UPF0715 GYO_4494 8f951243cb391c204a3ac85065c5a86a 142 Pfam PF04657 Putative inner membrane exporter, YdcZ 6 140 8.0E-37 T 14-10-2018 IPR006750 Putative inner membrane exporter, YdcZ GYO_4479 4c558a865db7b3525be029365b677577 269 SUPERFAMILY SSF69318 23 229 2.35E-12 T 14-10-2018 GYO_2997 d229bf7611d4f620fe5c652d84bb6748 56 Pfam PF17449 Uncharacterized protein YrzK 1 54 2.3E-33 T 14-10-2018 IPR035378 Uncharacterized protein YrzK GYO_2997 d229bf7611d4f620fe5c652d84bb6748 56 ProDom PD051845 YRZK 7 53 1.0E-20 T 14-10-2018 IPR035378 Uncharacterized protein YrzK GYO_0586 c80f7cbd45134d61b9895c1ad30d6826 544 Pfam PF03323 Bacillus/Clostridium GerA spore germination protein 47 507 7.7E-196 T 14-10-2018 IPR004995 Bacillus/Clostridium Ger spore germination protein GO:0009847|GO:0016021 GYO_0586 c80f7cbd45134d61b9895c1ad30d6826 544 PIRSF PIRSF005690 31 522 2.0E-213 T 14-10-2018 IPR004995 Bacillus/Clostridium Ger spore germination protein GO:0009847|GO:0016021 GYO_1457 4030877bfc3e5225d0bdf74af437c65b 383 PIRSF PIRSF007487 1 383 5.0E-102 T 14-10-2018 IPR021176 Competence-induced protein CoiA GYO_1457 4030877bfc3e5225d0bdf74af437c65b 383 Pfam PF06054 Competence protein CoiA-like family 3 373 7.8E-126 T 14-10-2018 IPR010330 Competence-induced protein CoiA-like GYO_3062 7c3e248c975a23aa197eefde8fbc7c39 165 ProDom PD104119 YSXD OB2071 ORFY 1 150 1.0E-67 T 14-10-2018 GYO_3477 abfe3d17eb0cb2d28c4e6d7784db1f77 1081 TIGRFAM TIGR03929 T7_esaA_Nterm: type VII secretion protein EsaA 11 207 8.1E-70 T 14-10-2018 IPR023838 Type VII secretion system EsaA GO:0016021 GYO_0394 47ab1a793df4f5806594271b5eb4c962 394 Pfam PF16226 Domain of unknown function (DUF4885) 63 386 3.5E-181 T 14-10-2018 IPR032617 Protein of unknown function DUF4885 GYO_2535 c5df2569c1e6352819730e913f1b490d 352 Pfam PF14493 Helix-turn-helix domain 257 344 3.3E-21 T 14-10-2018 IPR029491 Helicase Helix-turn-helix domain Reactome: R-HSA-3108214|Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473 GYO_2535 c5df2569c1e6352819730e913f1b490d 352 PIRSF PIRSF021350 4 352 1.8E-124 T 14-10-2018 IPR008308 Uncharacterised conserved protein UCP021350 GYO_1419 620b21682142f76b53b50fd84fc0b433 56 Pfam PF01679 Proteolipid membrane potential modulator 2 45 1.1E-11 T 14-10-2018 IPR000612 Proteolipid membrane potential modulator GO:0016021 GYO_3989 012d30ccfebbba34cfc011addebb4575 536 Pfam PF04434 SWIM zinc finger 66 98 8.2E-7 T 14-10-2018 IPR007527 Zinc finger, SWIM-type GO:0008270 GYO_3167 65bfcfecc358f555687c6414a2fdf153 154 Pfam PF04284 Protein of unknown function (DUF441) 7 146 3.9E-48 T 14-10-2018 IPR007382 Uncharacterised protein family UPF0756, transmembrame GYO_3167 65bfcfecc358f555687c6414a2fdf153 154 Hamap MF_01874 UPF0756 membrane protein YeaL [yeaL]. 3 149 19.136 T 14-10-2018 IPR007382 Uncharacterised protein family UPF0756, transmembrame GYO_3167 65bfcfecc358f555687c6414a2fdf153 154 ProDom PD021096 MEMBRANE YEAL PRECURSOR SIGNAL PROTEIN TRANSMEMBRANE YTWI HI1074 INTEGRAL SPANNING 21 131 2.0E-45 T 14-10-2018 IPR007382 Uncharacterised protein family UPF0756, transmembrame GYO_2664 431ed4a0215870b5b58366617812942b 243 Gene3D G3DSA:3.20.20.190 1 243 2.9E-78 T 14-10-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily GO:0006629|GO:0008081 GYO_2664 431ed4a0215870b5b58366617812942b 243 Pfam PF03009 Glycerophosphoryl diester phosphodiesterase family 7 234 1.2E-52 T 14-10-2018 IPR030395 Glycerophosphodiester phosphodiesterase domain GO:0006629|GO:0008081 GYO_2664 431ed4a0215870b5b58366617812942b 243 SUPERFAMILY SSF51695 2 240 1.1E-71 T 14-10-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily GO:0006629|GO:0008081 GYO_1827 f346b235bd48a8c231dd822f1b556a8c 403 ProSitePatterns PS00428 Cell cycle proteins ftsW / rodA / spoVE signature. 333 357 - T 14-10-2018 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site GO:0016021 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 GYO_1827 f346b235bd48a8c231dd822f1b556a8c 403 Pfam PF01098 Cell cycle protein 12 376 3.7E-122 T 14-10-2018 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA GO:0016021|GO:0051301 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 GYO_3890 bdce33af223849691414bbf2212c1eb5 98 Pfam PF10719 Late competence development protein ComFB 4 84 5.7E-14 T 14-10-2018 IPR019657 Late competence development protein ComFB GYO_1848 d01768b473cc58e79e07c8e1f1924ae9 408 TIGRFAM TIGR02871 spore_ylbJ: sporulation integral membrane protein YlbJ 9 391 2.9E-147 T 14-10-2018 IPR014226 Sporulation integral membrane protein YlbJ GYO_1848 d01768b473cc58e79e07c8e1f1924ae9 408 Pfam PF07670 Nucleoside recognition 44 140 1.3E-6 T 14-10-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 GYO_1371 722da789e537947375f73b51ac853cc5 72 Pfam PF10676 Spore germination protein gerPA/gerPF 1 71 7.2E-29 T 14-10-2018 IPR019618 Spore germination protein GerPA/GerPF GYO_1197 69e5bbe422d05e6a5654c0e4c0cd60fb 313 Pfam PF12679 ABC-2 family transporter protein 3 311 1.4E-15 T 14-10-2018 IPR032688 ABC-2 family transporter protein GO:0055085 GYO_2708 9daf2ab7a148371fbdbc1ca3b1c450a2 178 ProDom PD101610 MEMBRANE YQHR BH2802 TRANSMEMBRANE IG 17 163 1.0E-67 T 14-10-2018 IPR024563 Uncharacterised protein family YqhR GYO_2708 9daf2ab7a148371fbdbc1ca3b1c450a2 178 Pfam PF11085 Conserved membrane protein YqhR 10 171 1.9E-77 T 14-10-2018 IPR024563 Uncharacterised protein family YqhR GYO_2407 6246cb7826938bbff64a55a2a16252c4 202 Pfam PF14005 YpjP-like protein 68 199 2.5E-59 T 14-10-2018 IPR025616 YpjP-like protein GYO_3325 c123b310ab34c25dd1cb31228135bfc1 443 Pfam PF01654 Cytochrome bd terminal oxidase subunit I 6 433 1.1E-122 T 14-10-2018 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0009055|GO:0019646|GO:0070069 GYO_3325 c123b310ab34c25dd1cb31228135bfc1 443 PIRSF PIRSF006446 1 443 2.4E-114 T 14-10-2018 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0009055|GO:0019646|GO:0070069 GYO_1060 009ea5871f183d84ef4e5cd017c91db2 264 Pfam PF14167 YfkD-like protein 33 264 4.8E-121 T 14-10-2018 IPR025548 YfkD-like protein GYO_3835 7d4793164121bb2527e5434ce08da78c 312 Pfam PF07670 Nucleoside recognition 17 101 7.0E-9 T 14-10-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 GYO_3835 7d4793164121bb2527e5434ce08da78c 312 Pfam PF07670 Nucleoside recognition 175 263 4.7E-9 T 14-10-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 GYO_0648 7356b4c37b740393a63831bd647350fe 420 Pfam PF13641 Glycosyltransferase like family 2 49 279 5.4E-31 T 14-10-2018 GYO_0648 7356b4c37b740393a63831bd647350fe 420 SUPERFAMILY SSF53448 34 318 2.94E-63 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases GYO_0648 7356b4c37b740393a63831bd647350fe 420 Gene3D G3DSA:3.90.550.10 30 268 6.3E-49 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases GYO_1599 4ad11ab182c248b120c88652d194c6a4 56 Gene3D G3DSA:1.20.5.740 34 56 1.6E-18 T 14-10-2018 GYO_1599 4ad11ab182c248b120c88652d194c6a4 56 Pfam PF14185 Antitoxin SpoIISB, type II toxin-antitoxin system 1 56 5.1E-36 T 14-10-2018 IPR025897 Antitoxin SpoIISB GYO_1430 b5281078f40790868cfea9e22d3b75f0 59 Pfam PF14168 YjzC-like protein 2 55 1.3E-27 T 14-10-2018 IPR025549 YjzC-like protein GYO_3421 377747f5f4204aee3e4f0de07866d432 134 Pfam PF08868 YugN-like family 4 132 2.2E-51 T 14-10-2018 IPR014967 Uncharacterised protein family, YugN-like GYO_3421 377747f5f4204aee3e4f0de07866d432 134 Gene3D G3DSA:3.30.310.100 5 109 5.1E-29 T 14-10-2018 IPR036491 YugN-like superfamily GYO_3421 377747f5f4204aee3e4f0de07866d432 134 SUPERFAMILY SSF160755 1 132 8.63E-35 T 14-10-2018 IPR036491 YugN-like superfamily GYO_2511 abb41a20569a7cbc8102a91af7c33de9 67 ProDom PD054986 YPHE TRANSMEMBRANE MEMBRANE PRECURSOR BH1643 SIGNAL 1 67 2.0E-21 T 14-10-2018 IPR020076 Protein of unknown function DUF2768 GYO_2511 abb41a20569a7cbc8102a91af7c33de9 67 Pfam PF10966 Protein of unknown function (DUF2768) 7 64 7.0E-26 T 14-10-2018 IPR020076 Protein of unknown function DUF2768 GYO_2456 9b2d339a5a505f0c8d3e733ad0a8a850 320 Pfam PF10720 Protein of unknown function (DUF2515) 15 312 1.8E-129 T 14-10-2018 IPR019658 Protein of unknown function DUF2515 GYO_1684 064222a49dc77f767737bf0ecadb9fbd 252 SUPERFAMILY SSF56317 3 251 8.11E-72 T 14-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily GYO_1684 064222a49dc77f767737bf0ecadb9fbd 252 Pfam PF00795 Carbon-nitrogen hydrolase 7 244 2.7E-46 T 14-10-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807 GYO_1684 064222a49dc77f767737bf0ecadb9fbd 252 Gene3D G3DSA:3.60.110.10 1 252 2.0E-85 T 14-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily GYO_2806 1eee0bcb8257f8100a11c48ee7381a1d 331 Pfam PF12127 SigmaW regulon antibacterial 10 319 4.3E-165 T 14-10-2018 IPR022853 Uncharacterised protein family YdfA-immunity GYO_2806 1eee0bcb8257f8100a11c48ee7381a1d 331 Hamap MF_01562 UPF0365 protein . 3 323 50.329 T 14-10-2018 IPR022853 Uncharacterised protein family YdfA-immunity GYO_1671 49c95b1f79a77c4191616b831df7ce85 381 Pfam PF12791 Anti-sigma factor N-terminus 7 54 1.3E-10 T 14-10-2018 IPR024449 Anti-sigma factor RsgI, N-terminal GYO_4116 fb0948a31cfab30f117784ca28b978ac 43 Pfam PF11420 Bacteriocin subtilosin A 9 43 3.6E-28 T 14-10-2018 IPR021539 Bacteriocin subtilosin A GYO_0779 2d0a8e43e38b3044f85955d02e5d1bb8 42 SUPERFAMILY SSF56784 2 40 5.1E-5 T 14-10-2018 IPR036412 HAD-like superfamily GYO_2820 c3c26c67b5f3b6af4e802bef2d8a6416 112 Pfam PF12438 Protein of unknown function (DUF3679) 7 62 3.6E-29 T 14-10-2018 IPR020534 Uncharacterised protein family YqxA GYO_2820 c3c26c67b5f3b6af4e802bef2d8a6416 112 ProDom PD072942 YQXA ORF79 1 112 4.0E-52 T 14-10-2018 IPR020534 Uncharacterised protein family YqxA GYO_3452 214eee1cec5e93f5190dc5a4503ba1ef 113 Pfam PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L 5 107 4.0E-31 T 14-10-2018 IPR039428 NADH-ubiquinone oxidoreductase chain 4L/Mnh complex subunit C1-like GYO_2158 cb13ff34d49dc19d15af6b0dd20a7e08 148 Pfam PF10747 Sporulation inhibitor of replication protein SirA 3 143 3.9E-48 T 14-10-2018 IPR019683 Sporulation inhibitor of replication protein SirA GYO_2158 cb13ff34d49dc19d15af6b0dd20a7e08 148 Gene3D G3DSA:3.30.310.250 1 148 1.5E-61 T 14-10-2018 IPR038449 SirA superfamily GYO_0804 d928c165912e1898229ba6c474d6637b 157 SUPERFAMILY SSF55729 3 150 2.27E-23 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase GYO_0804 d928c165912e1898229ba6c474d6637b 157 Gene3D G3DSA:3.40.630.30 2 156 3.0E-39 T 14-10-2018 GYO_0804 d928c165912e1898229ba6c474d6637b 157 Pfam PF00583 Acetyltransferase (GNAT) family 43 145 1.3E-14 T 14-10-2018 IPR000182 GNAT domain GYO_3851 f05dfd2039a2a52a05613c5e8966fa4f 108 ProDom PD070949 MEMBRANE PROTEIN YVLA SPANNING SIMILAR SE2241 LMO0604 LMO2177 LIN2280 INTEGRAL 7 108 2.0E-37 T 14-10-2018 GYO_1824 9886c032582602e6bf561cfa4c4f9ae8 161 ProDom PD094668 YLAL SIMILAR MW0994 BH2628 SE0810 SA0960 3 160 8.0E-85 T 14-10-2018 IPR020229 Uncharacterised protein YlaL GYO_0034 d09d2d68cee22010ac44a3ec111b2fce 204 Pfam PF10112 5-bromo-4-chloroindolyl phosphate hydrolysis protein 9 197 1.5E-61 T 14-10-2018 IPR018770 5-bromo-4-chloroindolyl phosphate hydrolysis protein GYO_0942 bf6540aa07ec606f44df083f71c66304 337 SUPERFAMILY SSF75011 132 325 7.59E-7 T 14-10-2018 GYO_3617 47c628d07b410e28f0422a333988c4ab 290 Pfam PF13349 Putative adhesin 49 290 1.4E-52 T 14-10-2018 IPR025164 Putative adhesin GYO_0587 030646272fea27bbe9202cce3af4f5fb 407 Pfam PF05504 Spore germination B3/ GerAC like, C-terminal 228 394 9.3E-40 T 14-10-2018 IPR008844 Spore germination GerAC GO:0009847|GO:0016020 GYO_0587 030646272fea27bbe9202cce3af4f5fb 407 Gene3D G3DSA:3.30.300.210 245 397 6.5E-38 T 14-10-2018 IPR038501 Spore germination GerAC superfamily GYO_0587 030646272fea27bbe9202cce3af4f5fb 407 TIGRFAM TIGR02887 spore_ger_x_C: germination protein, Ger(x)C family 6 396 1.3E-99 T 14-10-2018 IPR008844 Spore germination GerAC GO:0009847|GO:0016020 GYO_0822 5a998aa908a5f94a4d81500a24fc629f 107 Pfam PF05437 Branched-chain amino acid transport protein (AzlD) 7 104 5.1E-24 T 14-10-2018 IPR008407 Branched-chain amino acid transport, AzlD GYO_3969 204e6da33595a3d142655b4ac60f5a8a 178 Pfam PF02417 Chromate transporter 6 170 1.5E-36 T 14-10-2018 IPR003370 Chromate transporter GO:0015109|GO:0015703 GYO_3443 671d99b3098d7cb5c2ef4875f4b99fd8 359 Gene3D G3DSA:3.40.50.2300 146 343 3.3E-108 T 14-10-2018 GYO_3443 671d99b3098d7cb5c2ef4875f4b99fd8 359 Gene3D G3DSA:3.40.50.2300 42 312 3.3E-108 T 14-10-2018 GYO_3443 671d99b3098d7cb5c2ef4875f4b99fd8 359 SUPERFAMILY SSF53822 52 266 8.83E-12 T 14-10-2018 IPR028082 Periplasmic binding protein-like I GYO_3443 671d99b3098d7cb5c2ef4875f4b99fd8 359 Pfam PF02608 ABC transporter substrate-binding protein PnrA-like 40 350 1.1E-102 T 14-10-2018 IPR003760 ABC transporter substrate-binding protein PnrA-like GO:0005886 GYO_0821 ba79fb34387fc9568087e89d5503dc15 241 Pfam PF03591 AzlC protein 26 166 2.5E-39 T 14-10-2018 IPR011606 Branched-chain amino acid transport, permease GYO_4018 290c1179c3bed57264ecfb584d5c4349 145 Pfam PF04892 VanZ like family 5 129 7.8E-13 T 14-10-2018 IPR006976 VanZ-like GYO_2171 5d6112c6cdc37ded4289ab32137015d3 48 Hamap MF_01505 Small, acid-soluble spore protein N [sspN]. 2 48 18.675 T 14-10-2018 IPR012612 Small acid-soluble spore protein, SspN GO:0030436|GO:0042601 GYO_2171 5d6112c6cdc37ded4289ab32137015d3 48 Pfam PF08177 Small acid-soluble spore protein N family 1 47 1.0E-24 T 14-10-2018 IPR012612 Small acid-soluble spore protein, SspN GO:0030436|GO:0042601 GYO_3709 0017ffac5ffb99a7f9e5effa3b20587e 232 ProDom PD113106 YVBI TRANSMEMBRANE MEMBRANE YEBC YBEC 1 228 3.0E-90 T 14-10-2018 GYO_4337 babe693ddc305f21111c3bb4f25af219 89 ProDom PD063106 YXIC 1 89 7.0E-43 T 14-10-2018 IPR020315 Uncharacterised protein family YxiC GYO_4337 babe693ddc305f21111c3bb4f25af219 89 Pfam PF17279 Family of unknown function (DUF5344) 3 87 1.5E-26 T 14-10-2018 GYO_2131 67a7238fd39495970a8216e4fff4e6a2 118 Pfam PF14037 YoqO-like protein 3 115 7.1E-35 T 14-10-2018 IPR025621 YoqO-like protein GYO_2710 8da4de2942c7aa0e7cfcfb3973dc80f0 131 ProDom PD968187 BETA-DEFENSIN ANTIBIOTIC PRECURSOR ANTIMICROBIAL DEFENSIN BETA SIGNAL DEFENSIN BD-32 DEFB-32 5 131 1.0E-67 T 14-10-2018 GYO_4277 0222cdc63e1692c353787529e80e5ae8 468 PIRSF PIRSF006446 1 468 5.6E-197 T 14-10-2018 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0009055|GO:0019646|GO:0070069 GYO_4277 0222cdc63e1692c353787529e80e5ae8 468 Pfam PF01654 Cytochrome bd terminal oxidase subunit I 6 442 7.7E-172 T 14-10-2018 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0009055|GO:0019646|GO:0070069 GYO_2427 5d936d7ee933869f0b29067e0fac599b 85 Pfam PF10752 Protein of unknown function (DUF2533) 2 84 4.1E-41 T 14-10-2018 IPR019688 Protein of unknown function DUF2533 GYO_1376 3fd581a9df4ac18cae1487542c0e2828 73 Pfam PF10676 Spore germination protein gerPA/gerPF 1 72 5.2E-30 T 14-10-2018 IPR019618 Spore germination protein GerPA/GerPF GYO_2533 806d236f17e5d07aa6ed5de350ad1b5f 200 Pfam PF02517 CAAX protease self-immunity 90 169 3.7E-11 T 14-10-2018 IPR003675 CAAX amino terminal protease GO:0016020 Reactome: R-HSA-5689880 GYO_3455 e166a2f1401f0bb54cbcaedc5ccd7652 94 Pfam PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) 31 83 4.8E-20 T 14-10-2018 IPR007208 Na(+)/H(+) antiporter subunit F-like GO:0015075|GO:0016021|GO:0034220 GYO_3455 e166a2f1401f0bb54cbcaedc5ccd7652 94 PIRSF PIRSF028784 1 92 2.7E-34 T 14-10-2018 IPR007208 Na(+)/H(+) antiporter subunit F-like GO:0015075|GO:0016021|GO:0034220 GYO_1576 e176d40fcefee88675933b3bc9f53ddb 161 Pfam PF04883 Bacteriophage HK97-gp10, putative tail-component 7 92 3.3E-10 T 14-10-2018 IPR010064 Bacteriophage HK97-gp10, putative tail-component GYO_1576 e176d40fcefee88675933b3bc9f53ddb 161 ProDom PD034535 XKDI PHAGE PHAGE-LIKE PBSX LIN1275 RELATED ELEMENT YQBI 1 161 1.0E-86 T 14-10-2018 GYO_2961 ea5934e8198fab2b0bdb45d10a0e28a4 122 Pfam PF10057 Uncharacterized conserved protein (DUF2294) 4 111 1.8E-35 T 14-10-2018 IPR018745 Domain of unknown function DUF2294 GYO_3389 066b7831f684c138b4059c0efd22ae99 87 Pfam PF05360 yiaA/B two helix domain 12 65 2.1E-15 T 14-10-2018 IPR008024 YiaAB two helix GYO_3380 a84188286d0e817f7c98933f9fd185e9 191 Gene3D G3DSA:2.40.50.140 109 191 3.8E-34 T 14-10-2018 GYO_0827 af0bacbfc8b6b1d4b829f84b7ee17a9a 245 Pfam PF01925 Sulfite exporter TauE/SafE 4 241 3.6E-40 T 14-10-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 GYO_0436 76162eed0e51c18339090543d3a495e7 91 Pfam PF07853 Protein of unknown function (DUF1648) 14 60 6.0E-14 T 14-10-2018 IPR012867 Domain of unknown function DUF1648 GYO_2058 68df9ac06387228792f9b152e7196fe4 181 Pfam PF10628 Outer spore coat protein E (CotE) 3 175 8.6E-68 T 14-10-2018 IPR018901 Spore coat protein CotE GYO_1710 235220893d08120fe8cad4f4e80e4c84 61 Pfam PF09953 Uncharacterized protein conserved in bacteria (DUF2187) 2 57 7.2E-29 T 14-10-2018 IPR018690 Protein of unknown function DUF2187 GYO_0680 7730227446bf2975f3a2e0d0d55ae49c 159 Pfam PF03703 Bacterial PH domain 74 148 8.1E-16 T 14-10-2018 IPR005182 Domain of unknown function DUF304 GYO_1393 d371270c152dbead858acd7248bd1191 203 Pfam PF01810 LysE type translocator 14 197 7.6E-29 T 14-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 GYO_0005 60c2849f915a30015fdd9c91e5341c79 81 Pfam PF04025 Domain of unknown function (DUF370) 3 72 5.5E-8 T 14-10-2018 IPR007169 Extracellular matrix regulatory protein A GYO_1293 43159642fe4380779e2154c5f2a4aeea 118 Pfam PF12732 YtxH-like protein 8 92 5.8E-12 T 14-10-2018 IPR024623 Uncharacterised protein family YtxH GYO_1293 43159642fe4380779e2154c5f2a4aeea 118 SUPERFAMILY SSF55194 22 104 7.48E-6 T 14-10-2018 IPR036191 RRF superfamily Reactome: R-HSA-5419276 GYO_1091 ec9712a3aa15b7de992e69e8575fee5b 134 Pfam PF07681 DoxX 9 87 2.1E-20 T 14-10-2018 IPR032808 DoxX family GYO_3736 5718af8fe8294994f20a7d4db2f40d2f 205 Pfam PF11193 Protein of unknown function (DUF2812) 10 117 5.8E-28 T 14-10-2018 IPR021359 Protein of unknown function DUF2812 GYO_2238 6fb5afd2b77d6b3730ad64fe79a8af5e 137 ProDom PD015812 YOPD YWLA YOAG 26 129 7.0E-35 T 14-10-2018 IPR031374 Uncharacterised protein family UPF0715 GYO_2238 6fb5afd2b77d6b3730ad64fe79a8af5e 137 Pfam PF17094 Uncharacterised protein family (UPF0715) 9 126 7.1E-34 T 14-10-2018 IPR031374 Uncharacterised protein family UPF0715 GYO_0673 bc829ab7fdbe6e544ca9a8dcd4ed177e 48 Pfam PF13040 Fur-regulated basic protein B 3 40 8.7E-18 T 14-10-2018 IPR025004 Transcriptional regulatory protein SenN/SenS GYO_2567 e7f676f6dc5e34433d5d58a35589fb78 68 Pfam PF09855 Nucleic-acid-binding protein containing Zn-ribbon domain (DUF2082) 5 67 7.9E-31 T 14-10-2018 IPR018652 Protein of unknown function DUF2082, nucleic-acid-binding, Zn-ribbon GYO_2224 1dcc2e3908ad2f652f4a26019d9b989b 101 Pfam PF06103 Bacterial protein of unknown function (DUF948) 6 93 1.1E-11 T 14-10-2018 IPR009293 Uncharacterised protein family UPF0478 GYO_4234 af78856a56c11b7cda23b77c2973e93d 225 Pfam PF10924 Protein of unknown function (DUF2711) 9 225 1.9E-105 T 14-10-2018 IPR024250 Protein of unknown function DUF2711 GYO_4234 af78856a56c11b7cda23b77c2973e93d 225 ProDom PD114754 YWBB 1 224 4.0E-110 T 14-10-2018 IPR024250 Protein of unknown function DUF2711 GYO_2211 e550c715768f177e82b065c644571926 76 TIGRFAM TIGR01764 excise: DNA binding domain, excisionase family 2 50 1.0E-11 T 14-10-2018 IPR010093 SinI-like, DNA-binding domain GO:0003677 GYO_4214 7ad5f2764cc8a7da01894da7330261ab 127 Pfam PF04138 GtrA-like protein 2 119 4.2E-27 T 14-10-2018 IPR007267 GtrA-like protein GO:0000271|GO:0016021 GYO_3013 5be28743e44dee6e9b7cea1c5ca66de5 66 Pfam PF11146 Protein of unknown function (DUF2905) 6 62 1.6E-20 T 14-10-2018 IPR021320 Protein of unknown function DUF2905 GYO_4138 efc880c6c128564b971df823f4a6b182 219 Pfam PF02163 Peptidase family M50 123 186 1.2E-8 T 14-10-2018 IPR008915 Peptidase M50 GO:0004222|GO:0006508 Reactome: R-HSA-1655829|Reactome: R-HSA-381033|Reactome: R-HSA-8874211|Reactome: R-HSA-8963889 GYO_2600 6cb4046468184a9f3ca9ef4bc177eee9 115 Pfam PF13025 Protein of unknown function (DUF3886) 48 113 3.8E-23 T 14-10-2018 IPR024980 Protein of unknown function DUF3886 GYO_2484 d1c46b7f0048fdd39b15cabd05b7d7ff 148 Pfam PF10673 Protein of unknown function (DUF2487) 10 145 4.3E-46 T 14-10-2018 IPR019615 Protein of unknown function DUF2487 GYO_0472 78eee51a0b77d22aa2c16da1de18a266 128 Pfam PF06271 RDD family 5 121 8.9E-15 T 14-10-2018 IPR010432 RDD GYO_1479 9b31190451d143fed911cc507253e4f4 149 Pfam PF10612 Spore coat protein Z 3 138 6.4E-31 T 14-10-2018 IPR019593 Spore coat protein Z/Y GYO_3753 4ad6327c95d0cf5c3406a8c3666d5373 563 TIGRFAM TIGR00795 lctP: transporter, lactate permease (LctP) family 7 554 3.5E-187 T 14-10-2018 IPR003804 L-lactate permease GO:0005887|GO:0015129|GO:0015727 GYO_3753 4ad6327c95d0cf5c3406a8c3666d5373 563 Pfam PF02652 L-lactate permease 16 554 4.4E-222 T 14-10-2018 IPR003804 L-lactate permease GO:0005887|GO:0015129|GO:0015727 GYO_3302 c4a973e41b6eaf4cc585671550e3cb45 368 Pfam PF10776 Protein of unknown function (DUF2600) 20 349 3.2E-150 T 14-10-2018 IPR019712 Protein of unknown function DUF2600 GYO_3618 71537d08ffb3a80bac260e44e6f39652 226 Pfam PF04012 PspA/IM30 family 1 220 4.9E-66 T 14-10-2018 IPR007157 PspA/IM30 GYO_1374 2755b7d0602b30efce314d80f572658c 205 Pfam PF10737 Spore germination protein GerPC 24 196 3.0E-65 T 14-10-2018 IPR019673 Spore germination protein GerPC GYO_1989 942ca5ba42e39bc39a276134b784008c 219 Pfam PF04347 Flagellar biosynthesis protein, FliO 102 200 1.5E-10 T 14-10-2018 IPR022781 Flagellar biosynthesis protein, FliO GO:0016021|GO:0044781 GYO_3888 50da811df0ce16a1e0b7e8fb986415f1 139 TIGRFAM TIGR03826 YvyF: flagellar operon protein TIGR03826 3 138 7.7E-58 T 14-10-2018 IPR022258 Flagellar operon protein YvyF GYO_1290 02da2d407f906505b254f949cd7d12a6 172 Pfam PF11667 Putative zincin peptidase 59 157 1.0E-18 T 14-10-2018 IPR021683 Putative zincin peptidase GYO_0939 616b9287ea05c24bc607b526c6e15627 629 Pfam PF04740 LXG domain of WXG superfamily 2 201 2.2E-50 T 14-10-2018 IPR006829 LXG domain GYO_3119 21e034b50b1e3e39dbd4149ce5b05e5c 297 Pfam PF13349 Putative adhesin 44 296 8.0E-38 T 14-10-2018 IPR025164 Putative adhesin GYO_0550 bd47a1967928a9707545c4c14775a5a3 110 ProDom PD673109 PRECURSOR SIGNAL YCKD ORF4 DOMAIN 17 110 6.0E-39 T 14-10-2018 IPR024485 Protein of unknown function DUF2680 GYO_0550 bd47a1967928a9707545c4c14775a5a3 110 Pfam PF10925 Protein of unknown function (DUF2680) 39 95 4.9E-25 T 14-10-2018 IPR024485 Protein of unknown function DUF2680 GYO_4111 e7437edbb7c6c2705a02e97cc6dccc35 239 Pfam PF14256 YwiC-like protein 5 129 5.2E-41 T 14-10-2018 IPR025576 YwiC-like protein GYO_3318 be14b65dbb71475f6f8b28b3cae38aab 46 Pfam PF12606 Tumour necrosis factor receptor superfamily member 19 1 40 3.2E-8 T 14-10-2018 IPR022248 TNF receptor family, RELT GYO_1588 1ce352fd01239b72ca8a614a05f82c00 348 Pfam PF04865 Baseplate J-like protein 62 306 1.7E-62 T 14-10-2018 IPR006949 Baseplate protein J-like GYO_1668 3ab3ffaaba3c1e71ba3fd5f5d9a52e14 217 Pfam PF09335 SNARE associated Golgi protein 37 162 1.1E-22 T 14-10-2018 IPR032816 SNARE associated Golgi protein GYO_4437 75069acc37009f376df1481866095622 245 SUPERFAMILY SSF54001 113 242 1.31E-16 T 14-10-2018 IPR038765 Papain-like cysteine peptidase superfamily GYO_3287 a156d8814cfd21f7382c5fadc0df0307 248 Pfam PF04791 LMBR1-like membrane protein 6 187 2.5E-9 T 14-10-2018 IPR006876 LMBR1-like membrane protein GYO_2746 7ed3ff17f95852f4e62ca89e12e415ac 351 SUPERFAMILY SSF82171 53 326 5.49E-7 T 14-10-2018 GYO_3399 2d55cf277c135bc6c1c8b6ed8c9d53d3 388 Pfam PF01594 AI-2E family transporter 32 363 8.4E-90 T 14-10-2018 IPR002549 Transmembrane protein TqsA-like GYO_4435 aa761301c86ec0f7b1fa60bc3f6be880 79 Pfam PF10852 Protein of unknown function (DUF2651) 8 77 3.1E-15 T 14-10-2018 IPR020258 Uncharacterised protein family YbeF GYO_4406 dc616300765e85b6b8f7a2b1569b7356 343 Pfam PF04230 Polysaccharide pyruvyl transferase 41 284 3.1E-29 T 14-10-2018 IPR007345 Polysaccharide pyruvyl transferase GYO_0482 c6a948f0ebe3fc5cadf34dca8eb9e69b 453 Pfam PF16244 Domain of unknown function (DUF4901) 8 194 1.1E-16 T 14-10-2018 IPR032599 Protein of unknown function DUF4901 GYO_3849 c17ef91079415759dedfb7850a01ae03 65 Pfam PF04024 PspC domain 3 60 8.5E-21 T 14-10-2018 IPR007168 Phage shock protein, PspC, N-terminal GYO_1182 3fb6af0f69ae85d08e9c410ab56409b7 213 Pfam PF13171 Protein of unknown function (DUF4004) 4 198 8.8E-79 T 14-10-2018 IPR025063 Protein of unknown function DUF4004 GYO_4305 5f68226d67970ee8b6141ce4cd0071dc 472 Pfam PF02447 GntP family permease 65 419 4.5E-5 T 14-10-2018 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 GYO_3710 256f8f3c312bd91dc9921b77077103b8 604 Pfam PF13240 zinc-ribbon domain 2 24 4.3E-6 T 14-10-2018 IPR026870 Zinc-ribbon domain Reactome: R-HSA-202670 GYO_1101 db7984b4034871e93c5136cc60314c28 396 Pfam PF12698 ABC-2 family transporter protein 21 390 6.8E-40 T 14-10-2018 GYO_1223 3014f58c76dc80e283b1486746e248d2 80 Pfam PF14148 YhdB-like protein 1 70 2.4E-40 T 14-10-2018 IPR025431 YhdB-like protein GYO_1035 70324d32cecc8b870c4626a399d50939 104 Pfam PF11588 Protein of unknown function (DUF3243) 24 102 8.8E-29 T 14-10-2018 IPR021637 Protein of unknown function DUF3243 GYO_1035 70324d32cecc8b870c4626a399d50939 104 Gene3D G3DSA:1.10.760.20 20 104 8.2E-33 T 14-10-2018 IPR038292 YmfJ/YflH superfamily GYO_2420 158261c1b686262404677d787035336c 60 Pfam PF10782 Zinc-finger 2 58 5.7E-29 T 14-10-2018 IPR019718 Protein of unknown function DUF2602 GYO_1280 6da0d0ff50672eb5abb852b7d908d468 61 Pfam PF14120 YhzD-like protein 1 61 4.3E-30 T 14-10-2018 IPR025544 YhzD-like protein GYO_2925 097fb4e28346e226753d5bc50606ee76 119 Gene3D G3DSA:2.30.30.40 32 106 1.2E-5 T 14-10-2018 GYO_0834 762b2fe31657195162c7cc6c578cbaa4 161 ProDom PD034585 YOAO YDHH MEMBRANE PRECURSOR TRANSMEMBRANE SIGNAL 1 158 5.0E-79 T 14-10-2018 IPR032545 Protein of unknown function DUF4944 GYO_0834 762b2fe31657195162c7cc6c578cbaa4 161 Pfam PF16302 Domain of unknown function (DUF4944) 35 161 3.4E-55 T 14-10-2018 IPR032545 Protein of unknown function DUF4944 GYO_0012 73dc8332c8188b5283f40eff7464cd03 328 Pfam PF14175 YaaC-like Protein 22 321 2.2E-110 T 14-10-2018 IPR026988 YaaC-like protein GYO_1351 828537ab56fa124269a76c0d8ad26e4c 207 Pfam PF09335 SNARE associated Golgi protein 43 160 4.7E-20 T 14-10-2018 IPR032816 SNARE associated Golgi protein GYO_0713 adc96369d26dab8862770e212f8ff0c0 46 SUPERFAMILY SSF160631 2 46 4.97E-10 T 14-10-2018 GYO_0713 adc96369d26dab8862770e212f8ff0c0 46 Gene3D G3DSA:3.40.1580.10 1 46 2.4E-9 T 14-10-2018 IPR037883 Knr4/Smi1-like domain superfamily GYO_1816 4d5b32757d581432a50b0e28288c5f6e 97 Pfam PF13490 Putative zinc-finger 6 37 1.1E-8 T 14-10-2018 IPR027383 Putative zinc-finger GYO_3954 f48aba96fe6abef67fb64c18cdeebe2b 322 Pfam PF02653 Branched-chain amino acid transport system / permease component 47 314 7.0E-53 T 14-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 GYO_3760 b652b302da945e30bd3160242f8858a1 202 Pfam PF02397 Bacterial sugar transferase 4 178 5.5E-63 T 14-10-2018 IPR003362 Bacterial sugar transferase GYO_2793 fa6a2355b029b77a301a566844ecef1f 47 Pfam PF14006 YqzL-like protein 3 46 8.8E-22 T 14-10-2018 IPR025617 YqzL-like protein GYO_3394 862858008485fdd09318221e6e68860f 243 TIGRFAM TIGR04450 Gpos_C8_like: putative immunity protein/bacteriocin 3 243 6.2E-98 T 14-10-2018 IPR031032 Putative immunity protein/bacteriocin GYO_3500 bc4ed69ccac13dfe43b8be54a8532474 106 Pfam PF14068 Putative membrane protein 7 106 6.0E-43 T 14-10-2018 IPR025917 Putative membrane protein YuiB GYO_1595 a4f5c3aa4df54dc593f474bc303fc646 89 Pfam PF10779 Haemolysin XhlA 10 75 1.3E-21 T 14-10-2018 IPR019715 Haemolysin XhlA GYO_3925 ce12d5daae66bde934b2a5e614d1a108 275 Pfam PF01061 ABC-2 type transporter 18 233 1.6E-27 T 14-10-2018 IPR013525 ABC-2 type transporter GO:0016020 Reactome: R-HSA-1369062 GYO_0556 bf468c8b7bf51a921d6f3d803a38c3cd 145 Pfam PF14040 Deoxyribonuclease NucA/NucB 49 134 3.6E-12 T 14-10-2018 IPR029476 Deoxyribonuclease NucA/NucB GYO_4217 fa99c338826ee23b4f8be1894e1be67a 102 Pfam PF04341 Protein of unknown function, DUF485 11 94 1.2E-20 T 14-10-2018 IPR007436 Protein of unknown function DUF485