locus-tag class description D9C08_00010 PF00664 ABC transporter transmembrane region D9C08_00010 PF00005 ABC transporter D9C08_00030 PF01502 Phosphoribosyl-AMP cyclohydrolase D9C08_00030 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase D9C08_00035 PF00977 Histidine biosynthesis protein D9C08_00040 PF00977 Histidine biosynthesis protein D9C08_00045 PF00117 Glutamine amidotransferase class-I D9C08_00050 PF00475 Imidazoleglycerol-phosphate dehydratase D9C08_00055 PF00815 Histidinol dehydrogenase D9C08_00060 PF01634 ATP phosphoribosyltransferase D9C08_00065 PF13393 Histidyl-tRNA synthetase D9C08_00070 PF13529 Peptidase_C39 like family D9C08_00075 PF03211 Pectate lyase D9C08_00085 PF14602 Hexapeptide repeat of succinyl-transferase D9C08_00090 PF13419 Haloacid dehalogenase-like hydrolase D9C08_00095 PF07670 Nucleoside recognition D9C08_00100 PF01790 Prolipoprotein diacylglyceryl transferase D9C08_00105 PF07475 HPr Serine kinase C-terminal domain D9C08_00105 PF02603 HPr Serine kinase N terminus D9C08_00110 PF01979 Amidohydrolase family D9C08_00115 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase D9C08_00125 PF00149 Calcineurin-like phosphoesterase D9C08_00140 PF04020 Mycobacterial 4 TMS phage holin, superfamily IV D9C08_00145 PF04024 PspC domain D9C08_00150 PF13349 Putative adhesin D9C08_00165 PF00700 Bacterial flagellin C-terminal helical region D9C08_00165 PF00669 Bacterial flagellin N-terminal helical region D9C08_00170 PF00005 ABC transporter D9C08_00170 PF17755 UvrA DNA-binding domain D9C08_00170 PF17760 UvrA interaction domain D9C08_00175 PF12344 Ultra-violet resistance protein B D9C08_00175 PF02151 UvrB/uvrC motif D9C08_00175 PF04851 Type III restriction enzyme, res subunit D9C08_00175 PF00271 Helicase conserved C-terminal domain D9C08_00175 PF17757 UvrB interaction domain D9C08_00180 PF09964 Uncharacterized protein conserved in bacteria (DUF2198) D9C08_00185 PF00391 PEP-utilising enzyme, mobile domain D9C08_00185 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain D9C08_00190 PF00440 Bacterial regulatory proteins, tetR family D9C08_00195 PF07690 Major Facilitator Superfamily D9C08_00200 PF17820 PDZ domain D9C08_00205 PF17423 Swarming motility protein D9C08_00210 PF03572 Peptidase family S41 D9C08_00210 PF17820 PDZ domain D9C08_00210 PF01471 Putative peptidoglycan binding domain D9C08_00215 PF18075 FtsX extracellular domain D9C08_00215 PF02687 FtsX-like permease family D9C08_00220 PF00005 ABC transporter D9C08_00225 PF13442 Cytochrome C oxidase, cbb3-type, subunit III D9C08_00230 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) D9C08_00230 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 D9C08_00240 PF01043 SecA preprotein cross-linking domain D9C08_00240 PF07516 SecA Wing and Scaffold domain D9C08_00240 PF02810 SEC-C motif D9C08_00240 PF07517 SecA DEAD-like domain D9C08_00250 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus D9C08_00250 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein D9C08_00265 PF02561 Flagellar protein FliS D9C08_00270 PF07196 Flagellin hook IN motif D9C08_00270 PF02465 Flagellar hook-associated protein 2 N-terminus D9C08_00270 PF07195 Flagellar hook-associated protein 2 C-terminus D9C08_00275 PF03646 FlaG protein D9C08_00280 PF00700 Bacterial flagellin C-terminal helical region D9C08_00280 PF00669 Bacterial flagellin N-terminal helical region D9C08_00285 PF02599 Global regulator protein family D9C08_00290 PF02623 FliW protein D9C08_00300 PF00669 Bacterial flagellin N-terminal helical region D9C08_00300 PF00700 Bacterial flagellin C-terminal helical region D9C08_00305 PF00460 Flagella basal body rod protein D9C08_00305 PF06429 Flagellar basal body rod FlgEFG protein C-terminal D9C08_00310 PF05130 FlgN protein D9C08_00315 PF04316 Anti-sigma-28 factor, FlgM D9C08_00330 PF10719 Late competence development protein ComFB D9C08_00335 PF00271 Helicase conserved C-terminal domain D9C08_00335 PF04851 Type III restriction enzyme, res subunit D9C08_00340 PF02645 Uncharacterised protein, DegV family COG1307 D9C08_00345 PF00196 Bacterial regulatory proteins, luxR family D9C08_00345 PF00072 Response regulator receiver domain D9C08_00350 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D9C08_00350 PF07730 Histidine kinase D9C08_00350 PF05384 Sensor protein DegS D9C08_00355 PF01205 Uncharacterized protein family UPF0029 D9C08_00355 PF09186 Domain of unknown function (DUF1949) D9C08_00360 PF03816 Cell envelope-related transcriptional attenuator domain D9C08_00395 PF00005 ABC transporter D9C08_00405 PF00953 Glycosyl transferase family 4 D9C08_00415 PF00535 Glycosyl transferase family 2 D9C08_00420 PF02706 Chain length determinant protein D9C08_00425 PF04932 O-Antigen ligase D9C08_00435 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain D9C08_00435 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain D9C08_00435 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain D9C08_00440 PF00534 Glycosyl transferases group 1 D9C08_00440 PF13439 Glycosyltransferase Family 4 D9C08_00445 PF14667 Polysaccharide biosynthesis C-terminal domain D9C08_00445 PF01943 Polysaccharide biosynthesis protein D9C08_00450 PF02397 Bacterial sugar transferase D9C08_00460 PF02350 UDP-N-acetylglucosamine 2-epimerase D9C08_00465 PF00483 Nucleotidyl transferase D9C08_00475 PF00005 ABC transporter D9C08_00480 PF01061 ABC-2 type transporter D9C08_00495 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase D9C08_00495 PF00535 Glycosyl transferase family 2 D9C08_00500 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase D9C08_00505 PF01467 Cytidylyltransferase-like D9C08_00510 PF03808 Glycosyl transferase WecB/TagA/CpsF family D9C08_00515 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase D9C08_00520 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase D9C08_00520 PF08239 Bacterial SH3 domain D9C08_00520 PF05036 Sporulation related domain D9C08_00525 PF01238 Phosphomannose isomerase type I D9C08_00540 PF05504 Spore germination B3/ GerAC like, C-terminal D9C08_00550 PF03816 Cell envelope-related transcriptional attenuator domain D9C08_00560 PF00877 NlpC/P60 family D9C08_00575 PF09587 Bacterial capsule synthesis protein PGA_cap D9C08_00580 PF14102 Capsule biosynthesis CapC D9C08_00585 PF08245 Mur ligase middle domain D9C08_00595 PF01609 Transposase DDE domain D9C08_00600 PF00356 Bacterial regulatory proteins, lacI family D9C08_00605 PF00294 pfkB family carbohydrate kinase D9C08_00610 PF05025 RbsD / FucU transport protein family D9C08_00615 PF00005 ABC transporter D9C08_00620 PF02653 Branched-chain amino acid transport system / permease component D9C08_00625 PF13407 Periplasmic binding protein domain D9C08_00630 PF08239 Bacterial SH3 domain D9C08_00635 PF13031 Protein of unknown function (DUF3892) D9C08_00640 PF02525 Flavodoxin-like fold D9C08_00645 PF03306 Alpha-acetolactate decarboxylase D9C08_00650 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain D9C08_00650 PF00205 Thiamine pyrophosphate enzyme, central domain D9C08_00650 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain D9C08_00655 PF03466 LysR substrate binding domain D9C08_00655 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D9C08_00675 PF08757 CotH kinase protein D9C08_00685 PF01613 Flavin reductase like domain D9C08_00690 PF13789 Domain of unknown function (DUF4181) D9C08_00700 PF01037 Lrp/AsnC ligand binding domain D9C08_00700 PF13404 AsnC-type helix-turn-helix domain D9C08_00705 PF02417 Chromate transporter D9C08_00710 PF02417 Chromate transporter D9C08_00720 PF03358 NADPH-dependent FMN reductase D9C08_00725 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D9C08_00725 PF03466 LysR substrate binding domain D9C08_00755 PF14431 YwqJ-like deaminase D9C08_00755 PF14449 Pre-toxin TG D9C08_00755 PF04740 LXG domain of WXG superfamily D9C08_00765 PF16888 Domain of unknown function (DUF5082) D9C08_00775 PF09234 Domain of unknown function (DUF1963) D9C08_00780 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain D9C08_00780 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain D9C08_00780 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain D9C08_00790 PF13614 AAA domain D9C08_00795 PF13807 G-rich domain on putative tyrosine kinase D9C08_00795 PF02706 Chain length determinant protein D9C08_00805 PF04434 SWIM zinc finger D9C08_00810 PF00176 SNF2 family N-terminal domain D9C08_00810 PF00271 Helicase conserved C-terminal domain D9C08_00810 PF12419 SNF2 Helicase protein D9C08_00825 PF08220 DeoR-like helix-turn-helix domain D9C08_00825 PF00455 DeoR C terminal sensor domain D9C08_00830 PF00436 Single-strand binding protein family D9C08_00840 PF14183 YwpF-like protein D9C08_00845 PF04203 Sortase domain D9C08_00850 PF06580 Histidine kinase D9C08_00850 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D9C08_00855 PF01741 Large-conductance mechanosensitive channel, MscL D9C08_00860 PF07977 FabA-like domain D9C08_00865 PF18801 response regulator aspartate phosphatase H, N terminal D9C08_00870 PF00460 Flagella basal body rod protein D9C08_00870 PF06429 Flagellar basal body rod FlgEFG protein C-terminal D9C08_00875 PF00460 Flagella basal body rod protein D9C08_00875 PF06429 Flagellar basal body rod FlgEFG protein C-terminal D9C08_00885 PF12116 Stage III sporulation protein D D9C08_00895 PF01047 MarR family D9C08_00900 PF07690 Major Facilitator Superfamily D9C08_00905 PF13229 Right handed beta helix region D9C08_00910 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin D9C08_00915 PF07690 Major Facilitator Superfamily D9C08_00920 PF00857 Isochorismatase family D9C08_00930 PF00909 Ammonium Transporter Family D9C08_00935 PF00543 Nitrogen regulatory protein P-II D9C08_00940 PF01569 PAP2 superfamily D9C08_00945 PF04892 VanZ like family D9C08_00950 PF01551 Peptidase family M23 D9C08_00955 PF00583 Acetyltransferase (GNAT) family D9C08_00960 PF17319 Family of unknown function (DUF5362) D9C08_00965 PF08666 SAF domain D9C08_00965 PF03102 NeuB family D9C08_00970 PF17370 Family of unknown function (DUF5392) D9C08_00975 PF13091 PLD-like domain D9C08_00975 PF13396 Phospholipase_D-nuclease N-terminal D9C08_00980 PF07739 TipAS antibiotic-recognition domain D9C08_00980 PF13411 MerR HTH family regulatory protein D9C08_00985 PF17319 Family of unknown function (DUF5362) D9C08_00995 PF02082 Transcriptional regulator D9C08_01000 PF01979 Amidohydrolase family D9C08_01000 PF00449 Urease alpha-subunit, N-terminal domain D9C08_01005 PF00699 Urease beta subunit D9C08_01010 PF00547 Urease, gamma subunit D9C08_01025 PF05532 CsbD-like D9C08_01035 PF17874 MalT-like TPR region D9C08_01035 PF18801 response regulator aspartate phosphatase H, N terminal D9C08_01045 PF06463 Molybdenum Cofactor Synthesis C D9C08_01045 PF04055 Radical SAM superfamily D9C08_01050 PF02634 FdhD/NarQ family D9C08_01060 PF00092 von Willebrand factor type A domain D9C08_01070 PF00092 von Willebrand factor type A domain D9C08_01075 PF08486 Stage II sporulation protein D9C08_01080 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) D9C08_01085 PF08680 TATA-box binding D9C08_01090 PF06612 Protein of unknown function (DUF1146) D9C08_01100 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain D9C08_01100 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain D9C08_01105 PF02874 ATP synthase alpha/beta family, beta-barrel domain D9C08_01105 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain D9C08_01110 PF00231 ATP synthase D9C08_01115 PF00306 ATP synthase alpha/beta chain, C terminal domain D9C08_01115 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain D9C08_01115 PF02874 ATP synthase alpha/beta family, beta-barrel domain D9C08_01120 PF00213 ATP synthase delta (OSCP) subunit D9C08_01125 PF00430 ATP synthase B/B' CF(0) D9C08_01130 PF00137 ATP synthase subunit C D9C08_01135 PF00119 ATP synthase A chain D9C08_01140 PF03899 ATP synthase I chain D9C08_01150 PF00464 Serine hydroxymethyltransferase D9C08_01155 PF04260 Protein of unknown function (DUF436) D9C08_01160 PF02502 Ribose/Galactose Isomerase D9C08_01165 PF01451 Low molecular weight phosphotyrosine protein phosphatase D9C08_01170 PF02659 Putative manganese efflux pump D9C08_01175 PF01300 Telomere recombination D9C08_01175 PF03481 Putative GTP-binding controlling metal-binding D9C08_01185 PF09551 Stage II sporulation protein R (spore_II_R) D9C08_01190 PF17094 Uncharacterised protein family (UPF0715) D9C08_01195 PF17247 Family of unknown function (DUF5316) D9C08_01200 PF17827 PrmC N-terminal domain D9C08_01200 PF05175 Methyltransferase small domain D9C08_01205 PF00472 RF-1 domain D9C08_01205 PF03462 PCRF domain D9C08_01210 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily D9C08_01215 PF13411 MerR HTH family regulatory protein D9C08_01220 PF03547 Membrane transport protein D9C08_01225 PF03949 Malic enzyme, NAD binding domain D9C08_01225 PF00390 Malic enzyme, N-terminal domain D9C08_01230 PF00265 Thymidine kinase D9C08_01235 PF01197 Ribosomal protein L31 D9C08_01240 PF07498 Rho termination factor, N-terminal domain D9C08_01240 PF07497 Rho termination factor, RNA-binding domain D9C08_01240 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain D9C08_01250 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded D9C08_01255 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) D9C08_01260 PF00923 Transaldolase/Fructose-6-phosphate aldolase D9C08_01265 PF01116 Fructose-bisphosphate aldolase class-II D9C08_01270 PF00072 Response regulator receiver domain D9C08_01275 PF10740 Domain of unknown function (DUF2529) D9C08_01285 PF00117 Glutamine amidotransferase class-I D9C08_01285 PF06418 CTP synthase N-terminus D9C08_01290 PF05066 HB1, ASXL, restriction endonuclease HTH domain D9C08_01295 PF02771 Acyl-CoA dehydrogenase, N-terminal domain D9C08_01295 PF02770 Acyl-CoA dehydrogenase, middle domain D9C08_01295 PF00441 Acyl-CoA dehydrogenase, C-terminal domain D9C08_01300 PF02754 Cysteine-rich domain D9C08_01300 PF13183 4Fe-4S dicluster domain D9C08_01305 PF13091 PLD-like domain D9C08_01310 PF03851 UV-endonuclease UvdE D9C08_01325 PF03485 Arginyl tRNA synthetase N terminal domain D9C08_01325 PF05746 DALR anticodon binding domain D9C08_01325 PF00750 tRNA synthetases class I (R) D9C08_01330 PF09148 Domain of unknown function (DUF1934) D9C08_01335 PF11420 Bacteriocin subtilosin A D9C08_01345 PF05402 Coenzyme PQQ synthesis protein D (PqqD) D9C08_01345 PF04055 Radical SAM superfamily D9C08_01345 PF13186 Iron-sulfur cluster-binding domain D9C08_01355 PF00005 ABC transporter D9C08_01365 PF05193 Peptidase M16 inactive domain D9C08_01370 PF00675 Insulinase (Peptidase family M16) D9C08_01395 PF18801 response regulator aspartate phosphatase H, N terminal D9C08_01400 PF11131 Rap-phr extracellular signalling D9C08_01410 PF00491 Arginase family D9C08_01415 PF17284 Spermidine synthase tetramerisation domain D9C08_01420 PF00905 Penicillin binding protein transpeptidase domain D9C08_01420 PF00912 Transglycosylase D9C08_01430 PF08741 YwhD family D9C08_01435 PF02163 Peptidase family M50 D9C08_01440 PF01361 Tautomerase enzyme D9C08_01445 PF01047 MarR family D9C08_01450 PF02824 TGS domain D9C08_01450 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain D9C08_01450 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) D9C08_01450 PF03129 Anticodon binding domain D9C08_01460 PF07690 Major Facilitator Superfamily D9C08_01465 PF02082 Transcriptional regulator D9C08_01475 PF01966 HD domain D9C08_01480 PF07293 Protein of unknown function (DUF1450) D9C08_01490 PF00892 EamA-like transporter family D9C08_01495 PF03099 Biotin/lipoate A/B protein ligase family D9C08_01500 PF03466 LysR substrate binding domain D9C08_01500 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D9C08_01505 PF01515 Phosphate acetyl/butaryl transferase D9C08_01520 PF00155 Aminotransferase class I and II D9C08_01525 PF07690 Major Facilitator Superfamily D9C08_01540 PF07883 Cupin domain D9C08_01555 PF07690 Major Facilitator Superfamily D9C08_01560 PF00324 Amino acid permease D9C08_01565 PF01546 Peptidase family M20/M25/M40 D9C08_01570 PF00171 Aldehyde dehydrogenase family D9C08_01575 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase D9C08_01575 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain D9C08_01580 PF17735 Biofilm surface layer A D9C08_01585 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase D9C08_01590 PF04321 RmlD substrate binding domain D9C08_01595 PF16363 GDP-mannose 4,6 dehydratase D9C08_01600 PF00483 Nucleotidyl transferase D9C08_01605 PF04101 Glycosyltransferase family 28 C-terminal domain D9C08_01610 PF02348 Cytidylyltransferase D9C08_01615 PF03102 NeuB family D9C08_01615 PF08666 SAF domain D9C08_01620 PF00583 Acetyltransferase (GNAT) family D9C08_01625 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family D9C08_01630 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase D9C08_01635 PF00535 Glycosyl transferase family 2 D9C08_01645 PF09671 Spore coat protein (Spore_GerQ) D9C08_01650 PF04241 Protein of unknown function (DUF423) D9C08_01655 PF00860 Permease family D9C08_01660 PF17261 Family of unknown function (DUF5327) D9C08_01665 PF00171 Aldehyde dehydrogenase family D9C08_01670 PF03167 Uracil DNA glycosylase superfamily D9C08_01675 PF00535 Glycosyl transferase family 2 D9C08_01680 PF08543 Phosphomethylpyrimidine kinase D9C08_01700 PF00251 Glycosyl hydrolases family 32 N-terminal domain D9C08_01700 PF08244 Glycosyl hydrolases family 32 C terminal D9C08_01705 PF00367 phosphotransferase system, EIIB D9C08_01705 PF02378 Phosphotransferase system, EIIC D9C08_01710 PF01226 Formate/nitrite transporter D9C08_01715 PF00874 PRD domain D9C08_01715 PF03123 CAT RNA binding domain D9C08_01725 PF13860 FlgD Ig-like domain D9C08_01725 PF00082 Subtilase family D9C08_01725 PF05922 Peptidase inhibitor I9 D9C08_01725 PF02225 PA domain D9C08_01730 PF00296 Luciferase-like monooxygenase D9C08_01735 PF00881 Nitroreductase family D9C08_01740 PF01098 Cell cycle protein D9C08_01750 PF17368 Spore morphogenesis and germination YwcE D9C08_01755 PF03626 Prokaryotic Cytochrome C oxidase subunit IV D9C08_01760 PF00510 Cytochrome c oxidase subunit III D9C08_01765 PF00115 Cytochrome C and Quinol oxidase polypeptide I D9C08_01770 PF00116 Cytochrome C oxidase subunit II, periplasmic domain D9C08_01770 PF02790 Cytochrome C oxidase subunit II, transmembrane domain D9C08_01775 PF04226 Transglycosylase associated protein D9C08_01780 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain D9C08_01780 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain D9C08_01785 PF10509 Galactokinase galactose-binding signature D9C08_01785 PF08544 GHMP kinases C terminal D9C08_01785 PF00288 GHMP kinases N terminal domain D9C08_01790 PF04138 GtrA-like protein D9C08_01795 PF00440 Bacterial regulatory proteins, tetR family D9C08_01800 PF08671 Anti-repressor SinI D9C08_01805 PF04341 Protein of unknown function, DUF485 D9C08_01810 PF00474 Sodium:solute symporter family D9C08_01815 PF01323 DSBA-like thioredoxin domain D9C08_01820 PF10518 TAT (twin-arginine translocation) pathway signal sequence D9C08_01820 PF04261 Dyp-type peroxidase family D9C08_01825 PF09375 Imelysin D9C08_01830 PF03239 Iron permease FTR1 family D9C08_01835 PF02581 Thiamine monophosphate synthase D9C08_01840 PF02110 Hydroxyethylthiazole kinase family D9C08_01845 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D9C08_01845 PF03466 LysR substrate binding domain D9C08_01850 PF03788 LrgA family D9C08_01855 PF04172 LrgB-like family D9C08_01860 PF12832 MFS_1 like family D9C08_01865 PF09962 Uncharacterized conserved protein (DUF2196) D9C08_01870 PF17785 PUA-like domain D9C08_01870 PF10672 S-adenosylmethionine-dependent methyltransferase D9C08_01875 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily D9C08_01880 PF10924 Protein of unknown function (DUF2711) D9C08_01885 PF02378 Phosphotransferase system, EIIC D9C08_01895 PF02378 Phosphotransferase system, EIIC D9C08_01895 PF00367 phosphotransferase system, EIIB D9C08_01900 PF00874 PRD domain D9C08_01900 PF03123 CAT RNA binding domain D9C08_01905 PF01501 Glycosyl transferase family 8 D9C08_01910 PF09529 Integral membrane protein (intg_mem_TP0381) D9C08_01915 PF01047 MarR family D9C08_01920 PF01479 S4 domain D9C08_01920 PF00579 tRNA synthetases class I (W and Y) D9C08_01925 PF02225 PA domain D9C08_01925 PF04389 Peptidase family M28 D9C08_01935 PF04607 Region found in RelA / SpoT proteins D9C08_01945 PF01040 UbiA prenyltransferase family D9C08_01960 PF12459 D-Ala-teichoic acid biosynthesis protein D9C08_01965 PF13193 AMP-binding enzyme C-terminal domain D9C08_01965 PF00501 AMP-binding enzyme D9C08_01970 PF03062 MBOAT, membrane-bound O-acyltransferase family D9C08_01975 PF00550 Phosphopantetheine attachment site D9C08_01980 PF04914 DltD protein D9C08_01990 PF01063 Amino-transferase class IV D9C08_01995 PF02056 Family 4 glycosyl hydrolase D9C08_01995 PF11975 Family 4 glycosyl hydrolase C-terminal domain D9C08_02000 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit D9C08_02005 PF02378 Phosphotransferase system, EIIC D9C08_02010 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit D9C08_02015 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 D9C08_02015 PF00874 PRD domain D9C08_02015 PF05043 Mga helix-turn-helix domain D9C08_02015 PF08279 HTH domain D9C08_02025 PF02245 Methylpurine-DNA glycosylase (MPG) D9C08_02030 PF00199 Catalase D9C08_02030 PF06628 Catalase-related immune-responsive D9C08_02035 PF07690 Major Facilitator Superfamily D9C08_02040 PF12679 ABC-2 family transporter protein D9C08_02045 PF00005 ABC transporter D9C08_02045 PF13732 Domain of unknown function (DUF4162) D9C08_02050 PF13396 Phospholipase_D-nuclease N-terminal D9C08_02060 PF17280 Family of unknown function (DUF5345) D9C08_02065 PF04542 Sigma-70 region 2 D9C08_02065 PF08281 Sigma-70, region 4 D9C08_02070 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin D9C08_02075 PF01256 Carbohydrate kinase D9C08_02080 PF00005 ABC transporter D9C08_02080 PF00664 ABC transporter transmembrane region D9C08_02085 PF00005 ABC transporter D9C08_02085 PF00664 ABC transporter transmembrane region D9C08_02090 PF02322 Cytochrome bd terminal oxidase subunit II D9C08_02095 PF01654 Cytochrome bd terminal oxidase subunit I D9C08_02100 PF03390 2-hydroxycarboxylate transporter family D9C08_02105 PF01435 Peptidase family M48 D9C08_02115 PF01522 Polysaccharide deacetylase D9C08_02120 PF00005 ABC transporter D9C08_02120 PF03459 TOBE domain D9C08_02120 PF17912 MalK OB fold domain D9C08_02125 PF13556 PucR C-terminal helix-turn-helix domain D9C08_02130 PF00171 Aldehyde dehydrogenase family D9C08_02135 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) D9C08_02135 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 D9C08_02150 PF16363 GDP-mannose 4,6 dehydratase D9C08_02165 PF00196 Bacterial regulatory proteins, luxR family D9C08_02165 PF00072 Response regulator receiver domain D9C08_02170 PF01546 Peptidase family M20/M25/M40 D9C08_02170 PF07687 Peptidase dimerisation domain D9C08_02180 PF04525 LURP-one-related D9C08_02185 PF01717 Cobalamin-independent synthase, Catalytic domain D9C08_02190 PF01717 Cobalamin-independent synthase, Catalytic domain D9C08_02200 PF01144 Coenzyme A transferase D9C08_02205 PF01144 Coenzyme A transferase D9C08_02215 PF08241 Methyltransferase domain D9C08_02220 PF01773 Na+ dependent nucleoside transporter N-terminus D9C08_02220 PF07662 Na+ dependent nucleoside transporter C-terminus D9C08_02235 PF00199 Catalase D9C08_02235 PF18011 C-terminal domain found in long catalases D9C08_02235 PF06628 Catalase-related immune-responsive D9C08_02240 PF03600 Citrate transporter D9C08_02245 PF00722 Glycosyl hydrolases family 16 D9C08_02250 PF00874 PRD domain D9C08_02250 PF03123 CAT RNA binding domain D9C08_02260 PF11700 Vacuole effluxer Atg22 like D9C08_02265 PF03880 DbpA RNA binding domain D9C08_02265 PF00270 DEAD/DEAH box helicase D9C08_02265 PF00271 Helicase conserved C-terminal domain D9C08_02270 PF13472 GDSL-like Lipase/Acylhydrolase family D9C08_02285 PF14176 YxiJ-like protein D9C08_02380 PF14176 YxiJ-like protein D9C08_02385 PF05593 RHS Repeat D9C08_02395 PF10014 2OG-Fe dioxygenase D9C08_02400 PF00582 Universal stress protein family D9C08_02410 PF18593 CdiI immunity protein D9C08_02420 PF04740 LXG domain of WXG superfamily D9C08_02420 PF14449 Pre-toxin TG D9C08_02430 PF16888 Domain of unknown function (DUF5082) D9C08_02435 PF13588 Type I restriction enzyme R protein N terminus (HSDR_N) D9C08_02435 PF04851 Type III restriction enzyme, res subunit D9C08_02435 PF00271 Helicase conserved C-terminal domain D9C08_02435 PF08463 EcoEI R protein C-terminal D9C08_02440 PF00293 NUDIX domain D9C08_02445 PF13087 AAA domain D9C08_02445 PF13086 AAA domain D9C08_02445 PF13195 Protein of unknown function (DUF4011) D9C08_02450 PF04616 Glycosyl hydrolases family 43 D9C08_02450 PF16369 C-terminal lipocalin-like domain D9C08_02465 PF00591 Glycosyl transferase family, a/b domain D9C08_02465 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain D9C08_02465 PF02885 Glycosyl transferase family, helical bundle domain D9C08_02470 PF01773 Na+ dependent nucleoside transporter N-terminus D9C08_02470 PF07662 Na+ dependent nucleoside transporter C-terminus D9C08_02475 PF01791 DeoC/LacD family aldolase D9C08_02485 PF06724 Domain of Unknown Function (DUF1206) D9C08_02490 PF04346 Ethanolamine utilisation protein, EutH D9C08_02495 PF03972 MmgE/PrpD family D9C08_02505 PF00005 ABC transporter D9C08_02510 PF00528 Binding-protein-dependent transport system inner membrane component D9C08_02515 PF00497 Bacterial extracellular solute-binding proteins, family 3 D9C08_02530 PF02275 Linear amide C-N hydrolases, choloylglycine hydrolase family D9C08_02545 PF11631 Protein of unknown function (DUF3255) D9C08_02575 PF01497 Periplasmic binding protein D9C08_02580 PF06486 Protein of unknown function (DUF1093) D9C08_02585 PF02687 FtsX-like permease family D9C08_02590 PF00005 ABC transporter D9C08_02595 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D9C08_02600 PF00072 Response regulator receiver domain D9C08_02600 PF00486 Transcriptional regulatory protein, C terminal D9C08_02605 PF01116 Fructose-bisphosphate aldolase class-II D9C08_02610 PF01261 Xylose isomerase-like TIM barrel D9C08_02615 PF01261 Xylose isomerase-like TIM barrel D9C08_02620 PF02894 Oxidoreductase family, C-terminal alpha/beta domain D9C08_02620 PF01408 Oxidoreductase family, NAD-binding Rossmann fold D9C08_02625 PF07690 Major Facilitator Superfamily D9C08_02630 PF01261 Xylose isomerase-like TIM barrel D9C08_02635 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain D9C08_02635 PF00205 Thiamine pyrophosphate enzyme, central domain D9C08_02635 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain D9C08_02640 PF00294 pfkB family carbohydrate kinase D9C08_02645 PF04962 KduI/IolB family D9C08_02650 PF00171 Aldehyde dehydrogenase family D9C08_02655 PF08220 DeoR-like helix-turn-helix domain D9C08_02655 PF00455 DeoR C terminal sensor domain D9C08_02660 PF00248 Aldo/keto reductase family D9C08_02690 PF00183 Hsp90 protein D9C08_02705 PF00440 Bacterial regulatory proteins, tetR family D9C08_02710 PF00171 Aldehyde dehydrogenase family D9C08_02715 PF06271 RDD family D9C08_02720 PF17369 Family of unknown function (DUF5391) D9C08_02725 PF06271 RDD family D9C08_02730 PF04235 Protein of unknown function (DUF418) D9C08_02735 PF07883 Cupin domain D9C08_02740 PF00440 Bacterial regulatory proteins, tetR family D9C08_02745 PF00106 short chain dehydrogenase D9C08_02750 PF01047 MarR family D9C08_02755 PF03788 LrgA family D9C08_02760 PF04172 LrgB-like family D9C08_02765 PF04230 Polysaccharide pyruvyl transferase D9C08_02770 PF02595 Glycerate kinase family D9C08_02775 PF00392 Bacterial regulatory proteins, gntR family D9C08_02775 PF07729 FCD domain D9C08_02780 PF02782 FGGY family of carbohydrate kinases, C-terminal domain D9C08_02780 PF00370 FGGY family of carbohydrate kinases, N-terminal domain D9C08_02785 PF02447 GntP family permease D9C08_02790 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase D9C08_02790 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain D9C08_02795 PF00578 AhpC/TSA family D9C08_02800 PF07992 Pyridine nucleotide-disulphide oxidoreductase D9C08_02800 PF13192 Thioredoxin domain D9C08_02805 PF00232 Glycosyl hydrolase family 1 D9C08_02810 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 D9C08_02820 PF00392 Bacterial regulatory proteins, gntR family D9C08_02820 PF07702 UTRA domain D9C08_02830 PF00005 ABC transporter D9C08_02835 PF06874 Firmicute fructose-1,6-bisphosphatase D9C08_02850 PF00011 Hsp20/alpha crystallin family D9C08_02865 PF01695 IstB-like ATP binding protein D9C08_02870 PF00665 Integrase core domain D9C08_02885 PF13361 UvrD-like helicase C-terminal domain D9C08_02885 PF00580 UvrD/REP helicase N-terminal domain D9C08_02930 PF02590 Predicted SPOUT methyltransferase D9C08_02935 PF14116 YyzF-like protein D9C08_02945 PF08240 Alcohol dehydrogenase GroES-like domain D9C08_02945 PF00107 Zinc-binding dehydrogenase D9C08_02955 PF10852 Protein of unknown function (DUF2651) D9C08_02970 PF00583 Acetyltransferase (GNAT) family D9C08_02990 PF00491 Arginase family D9C08_02995 PF00324 Amino acid permease D9C08_03000 PF00202 Aminotransferase class-III D9C08_03015 PF17418 Sporulation delaying protein SdpA D9C08_03020 PF13630 SdpI/YhfL protein family D9C08_03020 PF07853 Protein of unknown function (DUF1648) D9C08_03025 PF01022 Bacterial regulatory protein, arsR family D9C08_03030 PF13426 PAS domain D9C08_03030 PF02954 Bacterial regulatory protein, Fis family D9C08_03030 PF00158 Sigma-54 interaction domain D9C08_03045 PF13180 PDZ domain D9C08_03050 PF00753 Metallo-beta-lactamase superfamily D9C08_03055 PF09648 YycH protein D9C08_03060 PF07435 YycH protein D9C08_03065 PF00672 HAMP domain D9C08_03065 PF00512 His Kinase A (phospho-acceptor) domain D9C08_03065 PF13426 PAS domain D9C08_03065 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D9C08_03070 PF00072 Response regulator receiver domain D9C08_03070 PF00486 Transcriptional regulatory protein, C terminal D9C08_03095 PF00709 Adenylosuccinate synthetase D9C08_03100 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily D9C08_03105 PF00772 DnaB-like helicase N terminal domain D9C08_03105 PF03796 DnaB-like helicase C terminal domain D9C08_03110 PF09954 Uncharacterized protein conserved in bacteria (DUF2188) D9C08_03120 PF14174 YycC-like protein D9C08_03125 PF07690 Major Facilitator Superfamily D9C08_03130 PF13231 Dolichyl-phosphate-mannose-protein mannosyltransferase D9C08_03135 PF01281 Ribosomal protein L9, N-terminal domain D9C08_03135 PF03948 Ribosomal protein L9, C-terminal domain D9C08_03140 PF01368 DHH family D9C08_03140 PF02272 DHHA1 domain D9C08_03160 PF01638 HxlR-like helix-turn-helix D9C08_03165 PF01368 DHH family D9C08_03165 PF02833 DHHA2 domain D9C08_03185 PF13411 MerR HTH family regulatory protein D9C08_03185 PF06445 GyrI-like small molecule binding domain D9C08_03195 PF13474 SnoaL-like domain D9C08_03200 PF00805 Pentapeptide repeats (8 copies) D9C08_03215 PF01047 MarR family D9C08_03220 PF13673 Acetyltransferase (GNAT) domain D9C08_03240 PF01872 RibD C-terminal domain D9C08_03250 PF06445 GyrI-like small molecule binding domain D9C08_03255 PF03190 Protein of unknown function, DUF255 D9C08_03260 PF02517 CPBP intramembrane metalloprotease D9C08_03265 PF00083 Sugar (and other) transporter D9C08_03270 PF14602 Hexapeptide repeat of succinyl-transferase D9C08_03270 PF12464 Maltose acetyltransferase D9C08_03275 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily D9C08_03285 PF03372 Endonuclease/Exonuclease/phosphatase family D9C08_03290 PF01084 Ribosomal protein S18 D9C08_03295 PF00436 Single-strand binding protein family D9C08_03300 PF01250 Ribosomal protein S6 D9C08_03305 PF06071 Protein of unknown function (DUF933) D9C08_03305 PF01926 50S ribosome-binding GTPase D9C08_03310 PF04879 Molybdopterin oxidoreductase Fe4S4 domain D9C08_03310 PF00384 Molybdopterin oxidoreductase D9C08_03310 PF01568 Molydopterin dinucleotide binding domain D9C08_03315 PF06107 Bacterial protein of unknown function (DUF951) D9C08_03325 PF06866 Protein of unknown function (DUF1256) D9C08_03335 PF17762 HTH domain found in ParB protein D9C08_03335 PF02195 ParB-like nuclease domain D9C08_03340 PF13614 AAA domain D9C08_03345 PF06713 Bacterial PH domain D9C08_03350 PF02195 ParB-like nuclease domain D9C08_03350 PF17762 HTH domain found in ParB protein D9C08_03355 PF02527 rRNA small subunit methyltransferase G D9C08_03360 PF01134 Glucose inhibited division protein A D9C08_03360 PF13932 GidA associated domain D9C08_03365 PF10396 GTP-binding protein TrmE N-terminus D9C08_03365 PF12631 MnmE helical domain D9C08_03365 PF01926 50S ribosome-binding GTPase D9C08_03370 PF01424 R3H domain D9C08_03370 PF14804 Jag N-terminus D9C08_03375 PF02096 60Kd inner membrane protein D9C08_03380 PF00825 Ribonuclease P D9C08_03385 PF00468 Ribosomal protein L34 D9C08_03390 PF11638 DnaA N-terminal domain D9C08_03390 PF08299 Bacterial dnaA protein helix-turn-helix D9C08_03390 PF00308 Bacterial dnaA protein D9C08_03395 PF02768 DNA polymerase III beta subunit, C-terminal domain D9C08_03395 PF02767 DNA polymerase III beta subunit, central domain D9C08_03395 PF00712 DNA polymerase III beta subunit, N-terminal domain D9C08_03405 PF02463 RecF/RecN/SMC N terminal domain D9C08_03410 PF04025 Domain of unknown function (DUF370) D9C08_03415 PF01751 Toprim domain D9C08_03415 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D9C08_03415 PF00204 DNA gyrase B D9C08_03415 PF00986 DNA gyrase B subunit, carboxyl terminus D9C08_03420 PF03989 DNA gyrase C-terminal domain, beta-propeller D9C08_03420 PF00521 DNA gyrase/topoisomerase IV, subunit A D9C08_03450 PF14175 YaaC-like Protein D9C08_03455 PF00478 IMP dehydrogenase / GMP reductase domain D9C08_03455 PF00571 CBS domain D9C08_03460 PF00768 D-alanyl-D-alanine carboxypeptidase D9C08_03460 PF07943 Penicillin-binding protein 5, C-terminal domain D9C08_03465 PF01680 SOR/SNZ family D9C08_03470 PF01174 SNO glutamine amidotransferase family D9C08_03475 PF02403 Seryl-tRNA synthetase N-terminal domain D9C08_03475 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) D9C08_03485 PF01712 Deoxynucleoside kinase D9C08_03490 PF01712 Deoxynucleoside kinase D9C08_03495 PF01476 LysM domain D9C08_03495 PF00704 Glycosyl hydrolases family 18 D9C08_03500 PF00857 Isochorismatase family D9C08_03505 PF14437 MafB19-like deaminase D9C08_03515 PF12169 DNA polymerase III subunits gamma and tau domain III D9C08_03520 PF02575 YbaB/EbfC DNA-binding family D9C08_03525 PF02132 RecR protein D9C08_03525 PF13662 Toprim domain D9C08_03530 PF10704 Protein of unknown function (DUF2508) D9C08_03535 PF07441 SigmaK-factor processing regulatory protein BofA D9C08_03565 PF10764 Inhibitor of sigma-G Gin D9C08_03570 PF10112 5-bromo-4-chloroindolyl phosphate hydrolysis protein D9C08_03575 PF05816 Toxic anion resistance protein (TelA) D9C08_03580 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain D9C08_03580 PF01276 Orn/Lys/Arg decarboxylase, major domain D9C08_03585 PF02223 Thymidylate kinase D9C08_03590 PF06153 Cyclic-di-AMP receptor D9C08_03595 PF03885 Protein of unknown function (DUF327) D9C08_03600 PF09115 DNA polymerase III, delta subunit, C terminal D9C08_03605 PF04468 PSP1 C-terminal conserved region D9C08_03610 PF06156 Initiation control protein YabA D9C08_03615 PF05175 Methyltransferase small domain D9C08_03620 PF01541 GIY-YIG catalytic domain D9C08_03625 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases D9C08_03630 PF18277 AbrB C-terminal domain D9C08_03630 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin D9C08_03635 PF08264 Anticodon-binding domain of tRNA D9C08_03635 PF09334 tRNA synthetases class I (M) D9C08_03635 PF01588 Putative tRNA binding domain D9C08_03640 PF01026 TatD related DNase D9C08_03645 PF06725 3D domain D9C08_03645 PF07501 G5 domain D9C08_03645 PF03990 G5-linked-Ubiquitin-like domain D9C08_03650 PF13331 Domain of unknown function (DUF4093) D9C08_03650 PF13662 Toprim domain D9C08_03655 PF00398 Ribosomal RNA adenine dimethylase D9C08_03660 PF05582 YabG peptidase U57 D9C08_03665 PF06257 Biofilm formation stimulator VEG D9C08_03670 PF00269 Small, acid-soluble spore proteins, alpha/beta type D9C08_03675 PF08544 GHMP kinases C terminal D9C08_03675 PF00288 GHMP kinases N terminal domain D9C08_03680 PF09182 Bacterial purine repressor, N-terminal D9C08_03680 PF00156 Phosphoribosyl transferase domain D9C08_03685 PF01042 Endoribonuclease L-PSP D9C08_03690 PF04026 SpoVG D9C08_03695 PF00483 Nucleotidyl transferase D9C08_03695 PF00132 Bacterial transferase hexapeptide (six repeats) D9C08_03700 PF14572 Phosphoribosyl synthetase-associated domain D9C08_03700 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase D9C08_03705 PF01386 Ribosomal L25p family D9C08_03705 PF14693 Ribosomal protein TL5, C-terminal domain D9C08_03710 PF01195 Peptidyl-tRNA hydrolase D9C08_03715 PF10955 Protein of unknown function (DUF2757) D9C08_03720 PF17757 UvrB interaction domain D9C08_03720 PF02559 CarD-like/TRCF domain D9C08_03720 PF03461 TRCF domain D9C08_03720 PF00271 Helicase conserved C-terminal domain D9C08_03720 PF00270 DEAD/DEAH box helicase D9C08_03725 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin D9C08_03725 PF15714 Stage V sporulation protein T C-terminal, transcription factor D9C08_03730 PF14667 Polysaccharide biosynthesis C-terminal domain D9C08_03730 PF01943 Polysaccharide biosynthesis protein D9C08_03735 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases D9C08_03735 PF03819 MazG nucleotide pyrophosphohydrolase domain D9C08_03740 PF01479 S4 domain D9C08_03745 PF07873 YabP family D9C08_03750 PF09578 Spore cortex protein YabQ (Spore_YabQ) D9C08_03755 PF04977 Septum formation initiator D9C08_03760 PF00575 S1 RNA binding domain D9C08_03775 PF07228 Stage II sporulation protein E (SpoIIE) D9C08_03780 PF00092 von Willebrand factor type A domain D9C08_03785 PF00069 Protein kinase domain D9C08_03790 PF01171 PP-loop family D9C08_03790 PF09179 TilS substrate binding domain D9C08_03790 PF11734 TilS substrate C-terminal domain D9C08_03800 PF17862 AAA+ lid domain D9C08_03800 PF00004 ATPase family associated with various cellular activities (AAA) D9C08_03800 PF06480 FtsH Extracellular D9C08_03800 PF01434 Peptidase family M41 D9C08_03805 PF03309 Type III pantothenate kinase D9C08_03810 PF01430 Hsp33 protein D9C08_03815 PF13145 PPIC-type PPIASE domain D9C08_03820 PF00291 Pyridoxal-phosphate dependent enzyme D9C08_03835 PF04715 Anthranilate synthase component I, N terminal region D9C08_03835 PF00425 chorismate binding enzyme D9C08_03840 PF00117 Glutamine amidotransferase class-I D9C08_03845 PF01063 Amino-transferase class IV D9C08_03850 PF00809 Pterin binding enzyme D9C08_03855 PF02152 Dihydroneopterin aldolase D9C08_03860 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) D9C08_03865 PF01381 Helix-turn-helix D9C08_03870 PF01207 Dihydrouridine synthase (Dus) D9C08_03875 PF01336 OB-fold nucleic acid binding domain D9C08_03875 PF00152 tRNA synthetases class II (D, K and N) D9C08_03955 PF05848 CtsR N-terminal HTH domain D9C08_03955 PF17727 CtsR C-terminal dimerization domain D9C08_03960 PF02151 UvrB/uvrC motif D9C08_03965 PF00217 ATP:guanido phosphotransferase, C-terminal catalytic domain D9C08_03970 PF10431 C-terminal, D2-small domain, of ClpB protein D9C08_03970 PF02861 Clp amino terminal domain, pathogenicity island component D9C08_03970 PF17871 AAA lid domain D9C08_03970 PF07724 AAA domain (Cdc48 subfamily) D9C08_03970 PF00004 ATPase family associated with various cellular activities (AAA) D9C08_03975 PF18073 Rubredoxin metal binding domain D9C08_03980 PF02457 DisA bacterial checkpoint controller nucleotide-binding D9C08_03980 PF10635 DisA bacterial checkpoint controller linker region D9C08_03990 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase D9C08_03995 PF02542 YgbB family D9C08_04000 PF00749 tRNA synthetases class I (E and Q), catalytic domain D9C08_04005 PF00132 Bacterial transferase hexapeptide (six repeats) D9C08_04005 PF06426 Serine acetyltransferase, N-terminal D9C08_04010 PF09190 DALR domain D9C08_04010 PF01406 tRNA synthetases class I (C) catalytic domain D9C08_04015 PF00636 Ribonuclease III domain D9C08_04020 PF00588 SpoU rRNA Methylase family D9C08_04020 PF08032 RNA 2'-O ribose methyltransferase substrate binding D9C08_04025 PF05991 YacP-like NYN domain D9C08_04030 PF08281 Sigma-70, region 4 D9C08_04030 PF04542 Sigma-70 region 2 D9C08_04035 PF00471 Ribosomal protein L33 D9C08_04040 PF00584 SecE/Sec61-gamma subunits of protein translocation complex D9C08_04045 PF02357 Transcription termination factor nusG D9C08_04045 PF00467 KOW motif D9C08_04050 PF03946 Ribosomal protein L11, N-terminal domain D9C08_04050 PF00298 Ribosomal protein L11, RNA binding domain D9C08_04055 PF00687 Ribosomal protein L1p/L10e family D9C08_04060 PF00466 Ribosomal protein L10 D9C08_04065 PF00542 Ribosomal protein L7/L12 C-terminal domain D9C08_04065 PF16320 Ribosomal protein L7/L12 dimerisation domain D9C08_04070 PF05175 Methyltransferase small domain D9C08_04075 PF04563 RNA polymerase beta subunit D9C08_04075 PF04561 RNA polymerase Rpb2, domain 2 D9C08_04075 PF00562 RNA polymerase Rpb2, domain 6 D9C08_04075 PF04560 RNA polymerase Rpb2, domain 7 D9C08_04075 PF04565 RNA polymerase Rpb2, domain 3 D9C08_04075 PF10385 RNA polymerase beta subunit external 1 domain D9C08_04080 PF04998 RNA polymerase Rpb1, domain 5 D9C08_04080 PF04983 RNA polymerase Rpb1, domain 3 D9C08_04080 PF05000 RNA polymerase Rpb1, domain 4 D9C08_04080 PF00623 RNA polymerase Rpb1, domain 2 D9C08_04080 PF04997 RNA polymerase Rpb1, domain 1 D9C08_04085 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family D9C08_04090 PF00164 Ribosomal protein S12/S23 D9C08_04095 PF00177 Ribosomal protein S7p/S5e D9C08_04100 PF00679 Elongation factor G C-terminus D9C08_04100 PF14492 Elongation Factor G, domain II D9C08_04100 PF03764 Elongation factor G, domain IV D9C08_04100 PF03144 Elongation factor Tu domain 2 D9C08_04100 PF00009 Elongation factor Tu GTP binding domain D9C08_04105 PF03143 Elongation factor Tu C-terminal domain D9C08_04105 PF03144 Elongation factor Tu domain 2 D9C08_04105 PF00009 Elongation factor Tu GTP binding domain D9C08_04110 PF12146 Serine aminopeptidase, S33 D9C08_04115 PF00338 Ribosomal protein S10p/S20e D9C08_04120 PF00297 Ribosomal protein L3 D9C08_04125 PF00573 Ribosomal protein L4/L1 family D9C08_04130 PF00276 Ribosomal protein L23 D9C08_04135 PF00181 Ribosomal Proteins L2, RNA binding domain D9C08_04135 PF03947 Ribosomal Proteins L2, C-terminal domain D9C08_04140 PF00203 Ribosomal protein S19 D9C08_04145 PF00237 Ribosomal protein L22p/L17e D9C08_04150 PF00189 Ribosomal protein S3, C-terminal domain D9C08_04150 PF07650 KH domain D9C08_04155 PF00252 Ribosomal protein L16p/L10e D9C08_04160 PF00831 Ribosomal L29 protein D9C08_04165 PF00366 Ribosomal protein S17 D9C08_04170 PF00238 Ribosomal protein L14p/L23e D9C08_04175 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 D9C08_04175 PF00467 KOW motif D9C08_04180 PF00673 ribosomal L5P family C-terminus D9C08_04180 PF00281 Ribosomal protein L5 D9C08_04185 PF00253 Ribosomal protein S14p/S29e D9C08_04190 PF00410 Ribosomal protein S8 D9C08_04195 PF00347 Ribosomal protein L6 D9C08_04200 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast D9C08_04205 PF03719 Ribosomal protein S5, C-terminal domain D9C08_04205 PF00333 Ribosomal protein S5, N-terminal domain D9C08_04210 PF00327 Ribosomal protein L30p/L7e D9C08_04215 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A D9C08_04220 PF00344 SecY translocase D9C08_04225 PF05191 Adenylate kinase, active site lid D9C08_04230 PF00557 Metallopeptidase family M24 D9C08_04240 PF01176 Translation initiation factor 1A / IF-1 D9C08_04245 PF00444 Ribosomal protein L36 D9C08_04250 PF00416 Ribosomal protein S13/S18 D9C08_04255 PF00411 Ribosomal protein S11 D9C08_04260 PF01000 RNA polymerase Rpb3/RpoA insert domain D9C08_04260 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain D9C08_04260 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain D9C08_04265 PF01196 Ribosomal protein L17 D9C08_04270 PF00005 ABC transporter D9C08_04275 PF00005 ABC transporter D9C08_04280 PF02361 Cobalt transport protein D9C08_04285 PF01416 tRNA pseudouridine synthase D9C08_04290 PF00572 Ribosomal protein L13 D9C08_04295 PF00380 Ribosomal protein S9/S16 D9C08_04300 PF08241 Methyltransferase domain D9C08_04305 PF10730 Protein of unknown function (DUF2521) D9C08_04310 PF01520 N-acetylmuramoyl-L-alanine amidase D9C08_04315 PF10609 NUBPL iron-transfer P-loop NTPase D9C08_04320 PF17898 Spore germination GerD central core domain D9C08_04325 PF14089 KinB-signalling pathway activation in sporulation D9C08_04330 PF01522 Polysaccharide deacetylase D9C08_04460 PF00916 Sulfate permease family D9C08_04460 PF01740 STAS domain D9C08_04465 PF01758 Sodium Bile acid symporter family D9C08_04470 PF00756 Putative esterase D9C08_04475 PF01032 FecCD transport family D9C08_04480 PF01032 FecCD transport family D9C08_04485 PF01497 Periplasmic binding protein D9C08_04490 PF01497 Periplasmic binding protein D9C08_04490 PF12833 Helix-turn-helix domain D9C08_04500 PF01915 Glycosyl hydrolase family 3 C-terminal domain D9C08_04500 PF00933 Glycosyl hydrolase family 3 N terminal domain D9C08_04505 PF00144 Beta-lactamase D9C08_04510 PF02378 Phosphotransferase system, EIIC D9C08_04510 PF00367 phosphotransferase system, EIIB D9C08_04515 PF01418 Helix-turn-helix domain, rpiR family D9C08_04515 PF01380 SIS domain D9C08_04520 PF01380 SIS domain D9C08_04530 PF04463 Protein of unknown function (DUF523) D9C08_04560 PF08281 Sigma-70, region 4 D9C08_04560 PF04542 Sigma-70 region 2 D9C08_04565 PF13490 Putative zinc-finger D9C08_04570 PF02457 DisA bacterial checkpoint controller nucleotide-binding D9C08_04575 PF07949 YbbR-like protein D9C08_04580 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain D9C08_04580 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I D9C08_04580 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III D9C08_04580 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II D9C08_04585 PF01380 SIS domain D9C08_04590 PF14765 Polyketide synthase dehydratase D9C08_04590 PF02801 Beta-ketoacyl synthase, C-terminal domain D9C08_04590 PF00550 Phosphopantetheine attachment site D9C08_04590 PF00109 Beta-ketoacyl synthase, N-terminal domain D9C08_04590 PF16197 Ketoacyl-synthetase C-terminal extension D9C08_04590 PF00698 Acyl transferase domain D9C08_04590 PF08659 KR domain D9C08_04595 PF08659 KR domain D9C08_04595 PF02801 Beta-ketoacyl synthase, C-terminal domain D9C08_04595 PF00109 Beta-ketoacyl synthase, N-terminal domain D9C08_04595 PF00109 Beta-ketoacyl synthase, N-terminal domain D9C08_04595 PF16197 Ketoacyl-synthetase C-terminal extension D9C08_04595 PF00698 Acyl transferase domain D9C08_04595 PF16197 Ketoacyl-synthetase C-terminal extension D9C08_04595 PF00550 Phosphopantetheine attachment site D9C08_04595 PF14765 Polyketide synthase dehydratase D9C08_04595 PF00550 Phosphopantetheine attachment site D9C08_04595 PF02801 Beta-ketoacyl synthase, C-terminal domain D9C08_04595 PF08659 KR domain D9C08_04595 PF00698 Acyl transferase domain D9C08_04595 PF14765 Polyketide synthase dehydratase D9C08_04605 PF00753 Metallo-beta-lactamase superfamily D9C08_04615 PF00361 Proton-conducting membrane transporter D9C08_04615 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus D9C08_04620 PF10070 Uncharacterized protein conserved in bacteria (DUF2309) D9C08_04635 PF10057 Uncharacterized conserved protein (DUF2294) D9C08_04655 PF00069 Protein kinase domain D9C08_04665 PF16226 Domain of unknown function (DUF4885) D9C08_04670 PF00324 Amino acid permease D9C08_04680 PF17334 Minor curli fiber component A D9C08_04685 PF17340 Family of unknown function (DUF5370) D9C08_04690 PF00905 Penicillin binding protein transpeptidase domain D9C08_04695 PF00067 Cytochrome P450 D9C08_04705 PF13520 Amino acid permease D9C08_04710 PF03009 Glycerophosphoryl diester phosphodiesterase family D9C08_04715 PF07690 Major Facilitator Superfamily D9C08_04725 PF10852 Protein of unknown function (DUF2651) D9C08_04730 PF01047 MarR family D9C08_04730 PF00583 Acetyltransferase (GNAT) family D9C08_04750 PF08924 Domain of unknown function (DUF1906) D9C08_04750 PF01471 Putative peptidoglycan binding domain D9C08_04760 PF12833 Helix-turn-helix domain D9C08_04760 PF02311 AraC-like ligand binding domain D9C08_04770 PF04688 SPP1 phage holin D9C08_04775 PF05257 CHAP domain D9C08_04775 PF01476 LysM domain D9C08_04785 PF02222 ATP-grasp domain D9C08_04790 PF00089 Trypsin D9C08_04795 PF10794 Protein of unknown function (DUF2606) D9C08_04800 PF12697 Alpha/beta hydrolase family D9C08_04805 PF01066 CDP-alcohol phosphatidyltransferase D9C08_04810 PF09335 SNARE associated Golgi protein D9C08_04815 PF02666 Phosphatidylserine decarboxylase D9C08_04825 PF05139 Erythromycin esterase D9C08_04830 PF12833 Helix-turn-helix domain D9C08_04840 PF00375 Sodium:dicarboxylate symporter family D9C08_04845 PF02378 Phosphotransferase system, EIIC D9C08_04845 PF00367 phosphotransferase system, EIIB D9C08_04845 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 D9C08_04850 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase D9C08_04860 PF07853 Protein of unknown function (DUF1648) D9C08_04865 PF01063 Amino-transferase class IV D9C08_04870 PF00324 Amino acid permease D9C08_04875 PF02574 Homocysteine S-methyltransferase D9C08_04890 PF04960 Glutaminase D9C08_04895 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D9C08_04900 PF08664 YcbB domain D9C08_04900 PF00072 Response regulator receiver domain D9C08_04910 PF00701 Dihydrodipicolinate synthetase family D9C08_04915 PF00171 Aldehyde dehydrogenase family D9C08_04920 PF07690 Major Facilitator Superfamily D9C08_04925 PF13378 Enolase C-terminal domain-like D9C08_04930 PF07729 FCD domain D9C08_04930 PF00392 Bacterial regulatory proteins, gntR family D9C08_04935 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus D9C08_04935 PF08666 SAF domain D9C08_04940 PF01636 Phosphotransferase enzyme family D9C08_04945 PF15777 Tryptophan RNA-binding attenuator protein inhibitory protein D9C08_04950 PF00892 EamA-like transporter family D9C08_04955 PF00072 Response regulator receiver domain D9C08_04955 PF00486 Transcriptional regulatory protein, C terminal D9C08_04960 PF00512 His Kinase A (phospho-acceptor) domain D9C08_04960 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D9C08_04965 PF00005 ABC transporter D9C08_04980 PF10710 Protein of unknown function (DUF2512) D9C08_04985 PF07486 Cell Wall Hydrolase D9C08_04995 PF10138 vWA found in TerF C terminus D9C08_05005 PF16655 PhoD-like phosphatase, N-terminal domain D9C08_05005 PF09423 PhoD-like phosphatase D9C08_05010 PF02416 mttA/Hcf106 family D9C08_05015 PF00902 Sec-independent protein translocase protein (TatC) D9C08_05020 PF01470 Pyroglutamyl peptidase D9C08_05025 PF00266 Aminotransferase class-V D9C08_05030 PF07690 Major Facilitator Superfamily D9C08_05035 PF00440 Bacterial regulatory proteins, tetR family D9C08_05040 PF00710 Asparaginase, N-terminal D9C08_05040 PF17763 Glutaminase/Asparaginase C-terminal domain D9C08_05045 PF01674 Lipase (class 2) D9C08_05050 PF06271 RDD family D9C08_05055 PF02810 SEC-C motif D9C08_05055 PF05225 helix-turn-helix, Psq domain D9C08_05060 PF14501 GHKL domain D9C08_05065 PF04397 LytTr DNA-binding domain D9C08_05065 PF00072 Response regulator receiver domain D9C08_05070 PF00005 ABC transporter D9C08_05075 PF12679 ABC-2 family transporter protein D9C08_05090 PF11611 Domain of unknown function (DUF4352) D9C08_05090 PF17118 Domain of unknown function (DUF5105) D9C08_05100 PF16244 Domain of unknown function (DUF4901) D9C08_05105 PF16244 Domain of unknown function (DUF4901) D9C08_05110 PF13539 D-alanyl-D-alanine carboxypeptidase D9C08_05115 PF18801 response regulator aspartate phosphatase H, N terminal D9C08_05125 PF00128 Alpha amylase, catalytic domain D9C08_05130 PF01297 Zinc-uptake complex component A periplasmic D9C08_05135 PF00005 ABC transporter D9C08_05140 PF00950 ABC 3 transport family D9C08_05160 PF02342 TerD domain D9C08_05165 PF02342 TerD domain D9C08_05170 PF02342 TerD domain D9C08_05175 PF03741 Integral membrane protein TerC family D9C08_05180 PF14266 Putative component of 'biosynthetic module' D9C08_05185 PF05816 Toxic anion resistance protein (TelA) D9C08_05190 PF07690 Major Facilitator Superfamily D9C08_05200 PF07690 Major Facilitator Superfamily D9C08_05210 PF00005 ABC transporter D9C08_05210 PF00571 CBS domain D9C08_05215 PF00528 Binding-protein-dependent transport system inner membrane component D9C08_05220 PF04069 Substrate binding domain of ABC-type glycine betaine transport system D9C08_05225 PF01546 Peptidase family M20/M25/M40 D9C08_05225 PF07687 Peptidase dimerisation domain D9C08_05230 PF03606 C4-dicarboxylate anaerobic carrier D9C08_05245 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain D9C08_05245 PF00056 lactate/malate dehydrogenase, NAD binding domain D9C08_05250 PF02652 L-lactate permease D9C08_05260 PF08892 YqcI/YcgG family D9C08_05270 PF09347 Domain of unknown function (DUF1989) D9C08_05275 PF02540 NAD synthase D9C08_05290 PF01202 Shikimate kinase D9C08_05295 PF08241 Methyltransferase domain D9C08_05300 PF03466 LysR substrate binding domain D9C08_05300 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D9C08_05305 PF05448 Acetyl xylan esterase (AXE1) D9C08_05310 PF10127 RNA repair pathway DNA polymerase beta family D9C08_05315 PF01619 Proline dehydrogenase D9C08_05320 PF00171 Aldehyde dehydrogenase family D9C08_05325 PF00474 Sodium:solute symporter family D9C08_05330 PF13556 PucR C-terminal helix-turn-helix domain D9C08_05330 PF17853 GGDEF-like domain D9C08_05335 PF09323 Domain of unknown function (DUF1980) D9C08_05340 PF03773 Predicted permease D9C08_05345 PF00561 alpha/beta hydrolase fold D9C08_05350 PF07992 Pyridine nucleotide-disulphide oxidoreductase D9C08_05355 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases D9C08_05360 PF00355 Rieske [2Fe-2S] domain D9C08_05365 PF04324 BFD-like [2Fe-2S] binding domain D9C08_05365 PF18267 Rubredoxin NAD+ reductase C-terminal domain D9C08_05365 PF01077 Nitrite and sulphite reductase 4Fe-4S domain D9C08_05365 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain D9C08_05365 PF07992 Pyridine nucleotide-disulphide oxidoreductase D9C08_05370 PF04879 Molybdopterin oxidoreductase Fe4S4 domain D9C08_05370 PF00384 Molybdopterin oxidoreductase D9C08_05370 PF01568 Molydopterin dinucleotide binding domain D9C08_05375 PF18267 Rubredoxin NAD+ reductase C-terminal domain D9C08_05375 PF07992 Pyridine nucleotide-disulphide oxidoreductase D9C08_05375 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain D9C08_05375 PF04324 BFD-like [2Fe-2S] binding domain D9C08_05380 PF07690 Major Facilitator Superfamily D9C08_05390 PF03734 L,D-transpeptidase catalytic domain D9C08_05405 PF00528 Binding-protein-dependent transport system inner membrane component D9C08_05410 PF00497 Bacterial extracellular solute-binding proteins, family 3 D9C08_05420 PF06271 RDD family D9C08_05425 PF10925 Protein of unknown function (DUF2680) D9C08_05430 PF01047 MarR family D9C08_05445 PF00232 Glycosyl hydrolase family 1 D9C08_05450 PF11033 Competence protein J (ComJ) D9C08_05455 PF14040 Deoxyribonuclease NucA/NucB D9C08_05465 PF01380 SIS domain D9C08_05470 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family D9C08_05475 PF01638 HxlR-like helix-turn-helix D9C08_05480 PF00550 Phosphopantetheine attachment site D9C08_05480 PF00668 Condensation domain D9C08_05480 PF13193 AMP-binding enzyme C-terminal domain D9C08_05480 PF00501 AMP-binding enzyme D9C08_05485 PF00501 AMP-binding enzyme D9C08_05485 PF00668 Condensation domain D9C08_05485 PF00550 Phosphopantetheine attachment site D9C08_05485 PF13193 AMP-binding enzyme C-terminal domain D9C08_05490 PF13193 AMP-binding enzyme C-terminal domain D9C08_05490 PF00668 Condensation domain D9C08_05490 PF00550 Phosphopantetheine attachment site D9C08_05490 PF00975 Thioesterase domain D9C08_05490 PF00501 AMP-binding enzyme D9C08_05495 PF00975 Thioesterase domain D9C08_05500 PF07690 Major Facilitator Superfamily D9C08_05505 PF14317 YcxB-like protein D9C08_05510 PF00892 EamA-like transporter family D9C08_05520 PF00392 Bacterial regulatory proteins, gntR family D9C08_05520 PF00155 Aminotransferase class I and II D9C08_05525 PF01648 4'-phosphopantetheinyl transferase superfamily D9C08_05535 PF00005 ABC transporter D9C08_05540 PF00528 Binding-protein-dependent transport system inner membrane component D9C08_05545 PF00497 Bacterial extracellular solute-binding proteins, family 3 D9C08_05550 PF03466 LysR substrate binding domain D9C08_05550 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D9C08_05555 PF02441 Flavoprotein D9C08_05560 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase D9C08_05575 PF00561 alpha/beta hydrolase fold D9C08_05580 PF00854 POT family D9C08_05585 PF12708 Pectate lyase superfamily protein D9C08_05585 PF13229 Right handed beta helix region D9C08_05600 PF03323 Bacillus/Clostridium GerA spore germination protein D9C08_05605 PF05504 Spore germination B3/ GerAC like, C-terminal D9C08_05610 PF03845 Spore germination protein D9C08_05615 PF00005 ABC transporter D9C08_05620 PF02687 FtsX-like permease family D9C08_05620 PF12704 MacB-like periplasmic core domain D9C08_05625 PF00072 Response regulator receiver domain D9C08_05625 PF00486 Transcriptional regulatory protein, C terminal D9C08_05630 PF00672 HAMP domain D9C08_05630 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D9C08_05630 PF00512 His Kinase A (phospho-acceptor) domain D9C08_05635 PF18801 response regulator aspartate phosphatase H, N terminal D9C08_05640 PF11131 Rap-phr extracellular signalling D9C08_05645 PF09680 Family of unknown function D9C08_05650 PF09680 Family of unknown function D9C08_05655 PF00696 Amino acid kinase family D9C08_05655 PF13840 ACT domain D9C08_05660 PF01032 FecCD transport family D9C08_05665 PF01032 FecCD transport family D9C08_05670 PF00005 ABC transporter D9C08_05675 PF01497 Periplasmic binding protein D9C08_05680 PF07690 Major Facilitator Superfamily D9C08_05685 PF00440 Bacterial regulatory proteins, tetR family D9C08_05690 PF00881 Nitroreductase family D9C08_05695 PF03992 Antibiotic biosynthesis monooxygenase D9C08_05700 PF01022 Bacterial regulatory protein, arsR family D9C08_05705 PF00392 Bacterial regulatory proteins, gntR family D9C08_05705 PF00155 Aminotransferase class I and II D9C08_05710 PF00202 Aminotransferase class-III D9C08_05715 PF00171 Aldehyde dehydrogenase family D9C08_05720 PF06800 Sugar transport protein D9C08_05730 PF07987 Domain of unkown function (DUF1775) D9C08_05735 PF04234 CopC domain D9C08_05735 PF13115 YtkA-like D9C08_05735 PF05425 Copper resistance protein D D9C08_05740 PF08220 DeoR-like helix-turn-helix domain D9C08_05740 PF05573 NosL D9C08_05750 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit D9C08_05750 PF02378 Phosphotransferase system, EIIC D9C08_05755 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 D9C08_05760 PF08125 Mannitol dehydrogenase C-terminal domain D9C08_05760 PF01232 Mannitol dehydrogenase Rossmann domain D9C08_05765 PF00180 Isocitrate/isopropylmalate dehydrogenase D9C08_05770 PF10502 Signal peptidase, peptidase S26 D9C08_05780 PF07977 FabA-like domain D9C08_05800 PF03746 LamB/YcsF family D9C08_05805 PF01566 Natural resistance-associated macrophage protein D9C08_05810 PF07286 Protein of unknown function (DUF1445) D9C08_05815 PF02682 Carboxyltransferase domain, subdomain C and D D9C08_05820 PF02626 Carboxyltransferase domain, subdomain A and B D9C08_05825 PF01614 Bacterial transcriptional regulator D9C08_05825 PF09339 IclR helix-turn-helix domain D9C08_05830 PF13472 GDSL-like Lipase/Acylhydrolase family D9C08_05835 PF13129 Protein of unknown function (DUF3953) D9C08_05840 PF03992 Antibiotic biosynthesis monooxygenase D9C08_05845 PF03717 Penicillin-binding Protein dimerisation domain D9C08_05845 PF05223 NTF2-like N-terminal transpeptidase domain D9C08_05845 PF00905 Penicillin binding protein transpeptidase domain D9C08_05850 PF00248 Aldo/keto reductase family D9C08_05855 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit D9C08_05855 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 D9C08_05855 PF00874 PRD domain D9C08_05855 PF08279 HTH domain D9C08_05855 PF05043 Mga helix-turn-helix domain D9C08_05860 PF00501 AMP-binding enzyme D9C08_05860 PF13193 AMP-binding enzyme C-terminal domain D9C08_05865 PF13649 Methyltransferase domain D9C08_05880 PF13302 Acetyltransferase (GNAT) domain D9C08_05885 PF16242 Pyridoxamine 5'-phosphate oxidase like D9C08_05890 PF10997 Alternate to MurJ D9C08_05895 PF12823 Domain of unknown function (DUF3817) D9C08_05900 PF01037 Lrp/AsnC ligand binding domain D9C08_05905 PF01751 Toprim domain D9C08_05905 PF01131 DNA topoisomerase D9C08_05910 PF00293 NUDIX domain D9C08_05915 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain D9C08_05915 PF00205 Thiamine pyrophosphate enzyme, central domain D9C08_05915 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain D9C08_05940 PF01566 Natural resistance-associated macrophage protein D9C08_05945 PF04226 Transglycosylase associated protein D9C08_05950 PF09954 Uncharacterized protein conserved in bacteria (DUF2188) D9C08_05955 PF12787 EcsC protein family D9C08_05960 PF10685 Stress-induced bacterial acidophilic repeat motif D9C08_05960 PF00477 Small hydrophilic plant seed protein D9C08_05965 PF07883 Cupin domain D9C08_05970 PF16291 Domain of unknown function (DUF4937 D9C08_05975 PF05067 Manganese containing catalase D9C08_05980 PF03480 Bacterial extracellular solute-binding protein, family 7 D9C08_05985 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D9C08_05985 PF17203 Single cache domain 3 D9C08_05985 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain D9C08_05990 PF00072 Response regulator receiver domain D9C08_05990 PF08279 HTH domain D9C08_05995 PF00375 Sodium:dicarboxylate symporter family D9C08_06000 PF01594 AI-2E family transporter D9C08_06005 PF00005 ABC transporter D9C08_06020 PF08028 Acyl-CoA dehydrogenase, C-terminal domain D9C08_06020 PF02770 Acyl-CoA dehydrogenase, middle domain D9C08_06020 PF02771 Acyl-CoA dehydrogenase, N-terminal domain D9C08_06025 PF13040 Fur-regulated basic protein B D9C08_06035 PF01545 Cation efflux family D9C08_06035 PF16916 Dimerisation domain of Zinc Transporter D9C08_06040 PF00085 Thioredoxin D9C08_06045 PF07478 D-ala D-ala ligase C-terminus D9C08_06045 PF01820 D-ala D-ala ligase N-terminus D9C08_06050 PF02875 Mur ligase family, glutamate ligase domain D9C08_06050 PF08245 Mur ligase middle domain D9C08_06050 PF01225 Mur ligase family, catalytic domain D9C08_06060 PF00270 DEAD/DEAH box helicase D9C08_06060 PF00271 Helicase conserved C-terminal domain D9C08_06065 PF03703 Bacterial PH domain D9C08_06070 PF03703 Bacterial PH domain D9C08_06075 PF01694 Rhomboid family D9C08_06080 PF01648 4'-phosphopantetheinyl transferase superfamily D9C08_06090 PF00842 Alanine racemase, C-terminal domain D9C08_06090 PF01168 Alanine racemase, N-terminal domain D9C08_06095 PF01402 Ribbon-helix-helix protein, copG family D9C08_06100 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system D9C08_06105 PF08678 Rsbr N terminal D9C08_06105 PF01740 STAS domain D9C08_06110 PF01740 STAS domain D9C08_06115 PF13581 Histidine kinase-like ATPase domain D9C08_06120 PF07228 Stage II sporulation protein E (SpoIIE) D9C08_06120 PF08673 Phosphoserine phosphatase RsbU, N-terminal domain D9C08_06125 PF01740 STAS domain D9C08_06130 PF13581 Histidine kinase-like ATPase domain D9C08_06135 PF04539 Sigma-70 region 3 D9C08_06135 PF04545 Sigma-70, region 4 D9C08_06135 PF04542 Sigma-70 region 2 D9C08_06140 PF07228 Stage II sporulation protein E (SpoIIE) D9C08_06145 PF17674 HHH domain D9C08_06145 PF16921 Tex protein YqgF-like domain D9C08_06145 PF09371 Tex-like protein N-terminal domain D9C08_06145 PF00575 S1 RNA binding domain D9C08_06155 PF17283 SprT-like zinc ribbon domain D9C08_06155 PF10263 SprT-like family D9C08_06205 PF03466 LysR substrate binding domain D9C08_06205 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D9C08_06210 PF13302 Acetyltransferase (GNAT) domain D9C08_06220 PF04740 LXG domain of WXG superfamily D9C08_06220 PF14411 A nuclease of the HNH/ENDO VII superfamily with conserved LHH D9C08_06230 PF01381 Helix-turn-helix D9C08_06255 PF01965 DJ-1/PfpI family D9C08_06260 PF00313 'Cold-shock' DNA-binding domain D9C08_06265 PF02559 CarD-like/TRCF domain D9C08_06285 PF00892 EamA-like transporter family D9C08_06290 PF12833 Helix-turn-helix domain D9C08_06290 PF02311 AraC-like ligand binding domain D9C08_06295 PF00892 EamA-like transporter family D9C08_06300 PF12833 Helix-turn-helix domain D9C08_06300 PF06445 GyrI-like small molecule binding domain D9C08_06305 PF00392 Bacterial regulatory proteins, gntR family D9C08_06305 PF00155 Aminotransferase class I and II D9C08_06315 PF08818 Domain of unknown function (DU1801) D9C08_06335 PF00381 PTS HPr component phosphorylation site D9C08_06340 PF00440 Bacterial regulatory proteins, tetR family D9C08_06345 PF00892 EamA-like transporter family D9C08_06350 PF00392 Bacterial regulatory proteins, gntR family D9C08_06350 PF00155 Aminotransferase class I and II D9C08_06355 PF01575 MaoC like domain D9C08_06360 PF06821 Serine hydrolase D9C08_06365 PF01638 HxlR-like helix-turn-helix D9C08_06370 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) D9C08_06370 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 D9C08_06375 PF01022 Bacterial regulatory protein, arsR family D9C08_06380 PF02040 Arsenical pump membrane protein D9C08_06390 PF12746 GNAT acetyltransferase D9C08_06395 PF00892 EamA-like transporter family D9C08_06400 PF00392 Bacterial regulatory proteins, gntR family D9C08_06400 PF00155 Aminotransferase class I and II D9C08_06405 PF00282 Pyridoxal-dependent decarboxylase conserved domain D9C08_06410 PF01613 Flavin reductase like domain D9C08_06435 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D9C08_06435 PF07730 Histidine kinase D9C08_06440 PF00196 Bacterial regulatory proteins, luxR family D9C08_06440 PF00072 Response regulator receiver domain D9C08_06445 PF03176 MMPL family D9C08_06455 PF01609 Transposase DDE domain D9C08_06460 PF12697 Alpha/beta hydrolase family D9C08_06465 PF04474 Protein of unknown function (DUF554) D9C08_06470 PF13411 MerR HTH family regulatory protein D9C08_06470 PF06445 GyrI-like small molecule binding domain D9C08_06475 PF01545 Cation efflux family D9C08_06475 PF16916 Dimerisation domain of Zinc Transporter D9C08_06480 PF00881 Nitroreductase family D9C08_06485 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily D9C08_06490 PF07681 DoxX D9C08_06495 PF00085 Thioredoxin D9C08_06500 PF10676 Spore germination protein gerPA/gerPF D9C08_06505 PF10676 Spore germination protein gerPA/gerPF D9C08_06510 PF04239 Protein of unknown function (DUF421) D9C08_06515 PF04239 Protein of unknown function (DUF421) D9C08_06520 PF00011 Hsp20/alpha crystallin family D9C08_06525 PF10676 Spore germination protein gerPA/gerPF D9C08_06530 PF10676 Spore germination protein gerPA/gerPF D9C08_06535 PF00440 Bacterial regulatory proteins, tetR family D9C08_06540 PF13564 DoxX-like family D9C08_06545 PF00583 Acetyltransferase (GNAT) family D9C08_06555 PF00324 Amino acid permease D9C08_06560 PF05163 DinB family D9C08_06565 PF01047 MarR family D9C08_06570 PF03176 MMPL family D9C08_06575 PF00881 Nitroreductase family D9C08_06580 PF01047 MarR family D9C08_06585 PF07690 Major Facilitator Superfamily D9C08_06590 PF01925 Sulfite exporter TauE/SafE D9C08_06595 PF00392 Bacterial regulatory proteins, gntR family D9C08_06595 PF07729 FCD domain D9C08_06600 PF00704 Glycosyl hydrolases family 18 D9C08_06600 PF01476 LysM domain D9C08_06605 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase D9C08_06610 PF08139 Prokaryotic membrane lipoprotein lipid attachment site D9C08_06610 PF11611 Domain of unknown function (DUF4352) D9C08_06615 PF00245 Alkaline phosphatase D9C08_06620 PF08818 Domain of unknown function (DU1801) D9C08_06625 PF16302 Domain of unknown function (DUF4944) D9C08_06630 PF00583 Acetyltransferase (GNAT) family D9C08_06635 PF01966 HD domain D9C08_06640 PF07563 Protein of unknown function (DUF1541) D9C08_06645 PF07690 Major Facilitator Superfamily D9C08_06650 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit D9C08_06665 PF00232 Glycosyl hydrolase family 1 D9C08_06670 PF07702 UTRA domain D9C08_06670 PF00392 Bacterial regulatory proteins, gntR family D9C08_06675 PF00480 ROK family D9C08_06685 PF02156 Glycosyl hydrolase family 26 D9C08_06730 PF00586 AIR synthase related protein, N-terminal domain D9C08_06730 PF02769 AIR synthase related protein, C-terminal domain D9C08_06735 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE D9C08_06740 PF00814 Glycoprotease family D9C08_06745 PF00583 Acetyltransferase (GNAT) family D9C08_06750 PF00814 Glycoprotease family D9C08_06760 PF12848 ABC transporter D9C08_06760 PF16326 ABC transporter C-terminal domain D9C08_06760 PF00005 ABC transporter D9C08_06765 PF01967 MoaC family D9C08_06770 PF02629 CoA binding domain D9C08_06770 PF06971 Putative DNA-binding protein N-terminus D9C08_06775 PF02416 mttA/Hcf106 family D9C08_06780 PF00902 Sec-independent protein translocase protein (TatC) D9C08_06790 PF14146 Domain of unknown function (DUF4305) D9C08_06795 PF02517 CPBP intramembrane metalloprotease D9C08_06800 PF00166 Chaperonin 10 Kd subunit D9C08_06805 PF00118 TCP-1/cpn60 chaperonin family D9C08_06810 PF13495 Phage integrase, N-terminal SAM-like domain D9C08_06810 PF00589 Phage integrase family D9C08_06815 PF06114 IrrE N-terminal-like domain D9C08_06820 PF01381 Helix-turn-helix D9C08_06840 PF01381 Helix-turn-helix D9C08_06845 PF17448 Uncharacterized YqaH-like D9C08_06850 PF09466 Hypothetical protein Yqai D9C08_06880 PF07261 Replication initiation and membrane attachment D9C08_06885 PF01695 IstB-like ATP binding protein D9C08_06890 PF05866 Endodeoxyribonuclease RusA D9C08_06895 PF17356 Phage-like element PBSX protein XtrA D9C08_06975 PF00574 Clp protease D9C08_07020 PF01464 Transglycosylase SLT domain D9C08_07030 PF13457 GW (Gly-Tryp) dipeptide domain D9C08_07030 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase D9C08_07055 PF10960 BhlA holin family D9C08_07060 PF04688 SPP1 phage holin D9C08_07065 PF01471 Putative peptidoglycan binding domain D9C08_07065 PF01476 LysM domain D9C08_07065 PF01510 N-acetylmuramoyl-L-alanine amidase D9C08_07075 PF14410 HNH/ENDO VII superfamily nuclease with conserved GHE residues D9C08_07075 PF04740 LXG domain of WXG superfamily D9C08_07075 PF14449 Pre-toxin TG D9C08_07125 PF00931 NB-ARC domain D9C08_07125 PF13176 Tetratricopeptide repeat D9C08_07130 PF00107 Zinc-binding dehydrogenase D9C08_07130 PF08240 Alcohol dehydrogenase GroES-like domain D9C08_07140 PF00294 pfkB family carbohydrate kinase D9C08_07145 PF04012 PspA/IM30 family D9C08_07150 PF08271 TFIIB zinc-binding D9C08_07155 PF04536 TPM domain D9C08_07160 PF13421 SPFH domain-Band 7 family D9C08_07170 PF00083 Sugar (and other) transporter D9C08_07175 PF00107 Zinc-binding dehydrogenase D9C08_07175 PF08240 Alcohol dehydrogenase GroES-like domain D9C08_07180 PF03330 Lytic transglycolase D9C08_07185 PF07676 WD40-like Beta Propeller Repeat D9C08_07200 PF14169 Cold-inducible protein YdjO D9C08_07205 PF12697 Alpha/beta hydrolase family D9C08_07215 PF00394 Multicopper oxidase D9C08_07215 PF07732 Multicopper oxidase D9C08_07215 PF07731 Multicopper oxidase D9C08_07220 PF00324 Amino acid permease D9C08_07230 PF16916 Dimerisation domain of Zinc Transporter D9C08_07230 PF01545 Cation efflux family D9C08_07235 PF07726 ATPase family associated with various cellular activities (AAA) D9C08_07235 PF17863 AAA lid domain D9C08_07240 PF01882 Protein of unknown function DUF58 D9C08_07245 PF13559 Domain of unknown function (DUF4129) D9C08_07245 PF01841 Transglutaminase-like superfamily D9C08_07245 PF11992 Domain of unknown function (DUF3488) D9C08_07250 PF02540 NAD synthase D9C08_07250 PF00958 GMP synthase C terminal domain D9C08_07250 PF00117 Glutamine amidotransferase class-I D9C08_07265 PF00860 Permease family D9C08_07280 PF13076 Fur-regulated basic protein A D9C08_07285 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) D9C08_07290 PF14044 NETI protein D9C08_07295 PF00731 AIR carboxylase D9C08_07300 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain D9C08_07300 PF02222 ATP-grasp domain D9C08_07305 PF00206 Lyase D9C08_07305 PF10397 Adenylosuccinate lyase C-terminus D9C08_07310 PF01259 SAICAR synthetase D9C08_07315 PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase D9C08_07325 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain D9C08_07325 PF02769 AIR synthase related protein, C-terminal domain D9C08_07325 PF00586 AIR synthase related protein, N-terminal domain D9C08_07330 PF00156 Phosphoribosyl transferase domain D9C08_07335 PF02769 AIR synthase related protein, C-terminal domain D9C08_07335 PF00586 AIR synthase related protein, N-terminal domain D9C08_07340 PF00551 Formyl transferase D9C08_07345 PF01808 AICARFT/IMPCHase bienzyme D9C08_07345 PF02142 MGS-like domain D9C08_07350 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain D9C08_07350 PF02843 Phosphoribosylglycinamide synthetase, C domain D9C08_07350 PF02844 Phosphoribosylglycinamide synthetase, N domain D9C08_07355 PF01037 Lrp/AsnC ligand binding domain D9C08_07365 PF11127 Protein of unknown function (DUF2892) D9C08_07370 PF01979 Amidohydrolase family D9C08_07370 PF13382 Adenine deaminase C-terminal domain D9C08_07375 PF17479 Protein of unknown function (DUF3048) C-terminal domain D9C08_07375 PF11258 Protein of unknown function (DUF3048) N-terminal domain D9C08_07380 PF01371 Trp repressor protein D9C08_07385 PF01645 Conserved region in glutamate synthase D9C08_07390 PF01884 PcrB family D9C08_07395 PF13361 UvrD-like helicase C-terminal domain D9C08_07395 PF00580 UvrD/REP helicase N-terminal domain D9C08_07400 PF00533 BRCA1 C Terminus (BRCT) domain D9C08_07400 PF01653 NAD-dependent DNA ligase adenylation domain D9C08_07400 PF03120 NAD-dependent DNA ligase OB-fold domain D9C08_07400 PF03119 NAD-dependent DNA ligase C4 zinc finger domain D9C08_07400 PF12826 Helix-hairpin-helix motif D9C08_07405 PF07537 CamS sex pheromone cAM373 precursor D9C08_07410 PF01636 Phosphotransferase enzyme family D9C08_07415 PF02308 MgtC family D9C08_07420 PF00474 Sodium:solute symporter family D9C08_07425 PF02686 Glu-tRNAGln amidotransferase C subunit D9C08_07430 PF01425 Amidase D9C08_07435 PF02637 GatB domain D9C08_07435 PF02934 GatB/GatE catalytic domain D9C08_07440 PF00440 Bacterial regulatory proteins, tetR family D9C08_07445 PF00873 AcrB/AcrD/AcrF family D9C08_07450 PF00781 Diacylglycerol kinase catalytic domain D9C08_07455 PF01938 TRAM domain D9C08_07455 PF05958 tRNA (Uracil-5-)-methyltransferase D9C08_07485 PF18801 response regulator aspartate phosphatase H, N terminal D9C08_07485 PF13181 Tetratricopeptide repeat D9C08_07500 PF04634 Protein of unknown function, DUF600 D9C08_07505 PF04740 LXG domain of WXG superfamily D9C08_07525 PF18801 response regulator aspartate phosphatase H, N terminal D9C08_07525 PF13176 Tetratricopeptide repeat D9C08_07535 PF01709 Transcriptional regulator D9C08_07545 PF00440 Bacterial regulatory proteins, tetR family D9C08_07550 PF12680 SnoaL-like domain D9C08_07555 PF01370 NAD dependent epimerase/dehydratase family D9C08_07560 PF11007 Spore coat associated protein JA (CotJA) D9C08_07565 PF12652 CotJB protein D9C08_07570 PF05067 Manganese containing catalase D9C08_07575 PF00583 Acetyltransferase (GNAT) family D9C08_07585 PF04854 Protein of unknown function, DUF624 D9C08_07590 PF02743 Cache domain D9C08_07590 PF00672 HAMP domain D9C08_07590 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D9C08_07590 PF06580 Histidine kinase D9C08_07600 PF13416 Bacterial extracellular solute-binding protein D9C08_07610 PF00528 Binding-protein-dependent transport system inner membrane component D9C08_07615 PF07470 Glycosyl Hydrolase Family 88 D9C08_07620 PF12833 Helix-turn-helix domain D9C08_07625 PF13472 GDSL-like Lipase/Acylhydrolase family D9C08_07630 PF09224 Domain of unknown function (DUF1961) D9C08_07635 PF04854 Protein of unknown function, DUF624 D9C08_07645 PF18370 Rhamnogalacturonan I lyases beta-sheet domain D9C08_07645 PF01839 FG-GAP repeat D9C08_07655 PF02449 Beta-galactosidase D9C08_07655 PF08533 Beta-galactosidase C-terminal domain D9C08_07655 PF08532 Beta-galactosidase trimerisation domain D9C08_07665 PF01547 Bacterial extracellular solute-binding protein D9C08_07670 PF00528 Binding-protein-dependent transport system inner membrane component D9C08_07675 PF00528 Binding-protein-dependent transport system inner membrane component D9C08_07680 PF11975 Family 4 glycosyl hydrolase C-terminal domain D9C08_07680 PF02056 Family 4 glycosyl hydrolase D9C08_07685 PF04239 Protein of unknown function (DUF421) D9C08_07690 PF03992 Antibiotic biosynthesis monooxygenase D9C08_07695 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily D9C08_07705 PF01740 STAS domain D9C08_07710 PF10055 Uncharacterized small protein (DUF2292) D9C08_07715 PF01027 Inhibitor of apoptosis-promoting Bax1 D9C08_07720 PF01494 FAD binding domain D9C08_07725 PF04471 Restriction endonuclease D9C08_07725 PF14338 Mrr N-terminal domain D9C08_07730 PF13037 Domain of unknown function (DUF3898) D9C08_07730 PF13039 Protein of unknown function (DUF3900) D9C08_07735 PF00667 FAD binding domain D9C08_07735 PF00175 Oxidoreductase NAD-binding domain D9C08_07735 PF00067 Cytochrome P450 D9C08_07735 PF00258 Flavodoxin D9C08_07740 PF00884 Sulfatase D9C08_07745 PF00483 Nucleotidyl transferase D9C08_07750 PF16363 GDP-mannose 4,6 dehydratase D9C08_07760 PF00535 Glycosyl transferase family 2 D9C08_07765 PF03407 Nucleotide-diphospho-sugar transferase D9C08_07770 PF07690 Major Facilitator Superfamily D9C08_07775 PF13419 Haloacid dehalogenase-like hydrolase D9C08_07780 PF13520 Amino acid permease D9C08_07785 PF00171 Aldehyde dehydrogenase family D9C08_07790 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain D9C08_07795 PF16326 ABC transporter C-terminal domain D9C08_07795 PF12848 ABC transporter D9C08_07795 PF00005 ABC transporter D9C08_07800 PF10787 Uncharacterised protein from bacillus cereus group D9C08_07805 PF13411 MerR HTH family regulatory protein D9C08_07810 PF07690 Major Facilitator Superfamily D9C08_07830 PF00005 ABC transporter D9C08_07830 PF12848 ABC transporter D9C08_07835 PF00270 DEAD/DEAH box helicase D9C08_07835 PF00271 Helicase conserved C-terminal domain D9C08_07840 PF00583 Acetyltransferase (GNAT) family D9C08_07845 PF00872 Transposase, Mutator family D9C08_07855 PF00107 Zinc-binding dehydrogenase D9C08_07855 PF16884 N-terminal domain of oxidoreductase D9C08_07860 PF00005 ABC transporter D9C08_07865 PF01032 FecCD transport family D9C08_07870 PF01032 FecCD transport family D9C08_07875 PF01497 Periplasmic binding protein D9C08_07880 PF11486 Protein of unknown function (DUF3212) D9C08_07885 PF11181 Heat induced stress protein YflT D9C08_07890 PF00544 Pectate lyase D9C08_07895 PF00939 Sodium:sulfate symporter transmembrane region D9C08_07900 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain D9C08_07900 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D9C08_07905 PF08279 HTH domain D9C08_07905 PF12431 Transcriptional regulator D9C08_07905 PF00072 Response regulator receiver domain D9C08_07910 PF03401 Tripartite tricarboxylate transporter family receptor D9C08_07915 PF03600 Citrate transporter D9C08_07920 PF00753 Metallo-beta-lactamase superfamily D9C08_07925 PF02898 Nitric oxide synthase, oxygenase domain D9C08_07930 PF00708 Acylphosphatase D9C08_07935 PF03473 MOSC domain D9C08_07935 PF03475 3-alpha domain D9C08_07940 PF11121 Protein of unknown function (DUF2639) D9C08_07950 PF11588 Protein of unknown function (DUF3243) D9C08_07955 PF00557 Metallopeptidase family M24 D9C08_07960 PF02378 Phosphotransferase system, EIIC D9C08_07960 PF00367 phosphotransferase system, EIIB D9C08_07965 PF00884 Sulfatase D9C08_07975 PF09350 Domain of unknown function (DUF1992) D9C08_07990 PF02378 Phosphotransferase system, EIIC D9C08_07990 PF00367 phosphotransferase system, EIIB D9C08_07995 PF16657 Maltogenic Amylase, C-terminal domain D9C08_07995 PF00128 Alpha amylase, catalytic domain D9C08_08000 PF00392 Bacterial regulatory proteins, gntR family D9C08_08000 PF07702 UTRA domain D9C08_08005 PF00881 Nitroreductase family D9C08_08010 PF00149 Calcineurin-like phosphoesterase D9C08_08010 PF02872 5'-nucleotidase, C-terminal domain D9C08_08015 PF01965 DJ-1/PfpI family D9C08_08020 PF07690 Major Facilitator Superfamily D9C08_08025 PF06569 Protein of unknown function (DUF1128) D9C08_08030 PF01451 Low molecular weight phosphotyrosine protein phosphatase D9C08_08040 PF03631 Virulence factor BrkB D9C08_08045 PF07690 Major Facilitator Superfamily D9C08_08050 PF01699 Sodium/calcium exchanger protein D9C08_08055 PF14167 YfkD-like protein D9C08_08060 PF00924 Mechanosensitive ion channel D9C08_08065 PF08756 YfkB-like domain D9C08_08065 PF04055 Radical SAM superfamily D9C08_08075 PF01522 Polysaccharide deacetylase D9C08_08080 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase D9C08_08080 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase D9C08_08085 PF01544 CorA-like Mg2+ transporter protein D9C08_08090 PF00730 HhH-GPD superfamily base excision DNA repair protein D9C08_08095 PF05958 tRNA (Uracil-5-)-methyltransferase D9C08_08095 PF01938 TRAM domain D9C08_08100 PF14118 YfzA-like protein D9C08_08105 PF01207 Dihydrouridine synthase (Dus) D9C08_08120 PF00676 Dehydrogenase E1 component D9C08_08125 PF02779 Transketolase, pyrimidine binding domain D9C08_08125 PF02780 Transketolase, C-terminal domain D9C08_08130 PF02817 e3 binding domain D9C08_08130 PF00364 Biotin-requiring enzyme D9C08_08130 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) D9C08_08135 PF07992 Pyridine nucleotide-disulphide oxidoreductase D9C08_08135 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain D9C08_08140 PF00158 Sigma-54 interaction domain D9C08_08140 PF02954 Bacterial regulatory protein, Fis family D9C08_08140 PF01590 GAF domain D9C08_08145 PF08141 Small acid-soluble spore protein H family D9C08_08150 PF02694 Uncharacterised BCR, YnfA/UPF0060 family D9C08_08155 PF17353 Family of unknown function (DUF5381) D9C08_08160 PF17353 Family of unknown function (DUF5381) D9C08_08175 PF06013 Proteins of 100 residues with WXG D9C08_08180 PF02056 Family 4 glycosyl hydrolase D9C08_08180 PF11975 Family 4 glycosyl hydrolase C-terminal domain D9C08_08185 PF01380 SIS domain D9C08_08185 PF01418 Helix-turn-helix domain, rpiR family D9C08_08190 PF00367 phosphotransferase system, EIIB D9C08_08190 PF02378 Phosphotransferase system, EIIC D9C08_08195 PF00005 ABC transporter D9C08_08195 PF00664 ABC transporter transmembrane region D9C08_08200 PF00005 ABC transporter D9C08_08200 PF00664 ABC transporter transmembrane region D9C08_08205 PF07681 DoxX D9C08_08210 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily D9C08_08215 PF07730 Histidine kinase D9C08_08220 PF00196 Bacterial regulatory proteins, luxR family D9C08_08220 PF00072 Response regulator receiver domain D9C08_08225 PF00005 ABC transporter D9C08_08240 PF03551 Transcriptional regulator PadR-like family D9C08_08240 PF10400 Virulence activator alpha C-term D9C08_08245 PF01674 Lipase (class 2) D9C08_08250 PF01757 Acyltransferase family D9C08_08255 PF00440 Bacterial regulatory proteins, tetR family D9C08_08255 PF17922 Tetracyclin repressor-like, C-terminal domain D9C08_08260 PF07690 Major Facilitator Superfamily D9C08_08265 PF12867 DinB superfamily D9C08_08275 PF01047 MarR family D9C08_08280 PF03706 Lysylphosphatidylglycerol synthase TM region D9C08_08280 PF09924 Uncharacterised conserved protein (DUF2156) D9C08_08285 PF01497 Periplasmic binding protein D9C08_08290 PF01032 FecCD transport family D9C08_08295 PF01032 FecCD transport family D9C08_08300 PF02567 Phenazine biosynthesis-like protein D9C08_08305 PF00881 Nitroreductase family D9C08_08310 PF14151 YfhD-like protein D9C08_08315 PF14152 YfhE-like protein D9C08_08320 PF08338 Domain of unknown function (DUF1731) D9C08_08320 PF01370 NAD dependent epimerase/dehydratase family D9C08_08325 PF02631 RecX family D9C08_08330 PF08838 Protein of unknown function (DUF1811) D9C08_08335 PF07690 Major Facilitator Superfamily D9C08_08345 PF08176 Small acid-soluble spore protein K family D9C08_08350 PF14043 WVELL protein D9C08_08355 PF08239 Bacterial SH3 domain D9C08_08360 PF13630 SdpI/YhfL protein family D9C08_08365 PF00561 alpha/beta hydrolase fold D9C08_08370 PF00535 Glycosyl transferase family 2 D9C08_08375 PF09586 Bacterial membrane protein YfhO D9C08_08380 PF04307 LexA-binding, inner membrane-associated putative hydrolase D9C08_08385 PF00730 HhH-GPD superfamily base excision DNA repair protein D9C08_08385 PF14815 NUDIX domain D9C08_08400 PF04259 Small, acid-soluble spore protein, gamma-type D9C08_08405 PF14182 YgaB-like protein D9C08_08410 PF04167 Protein of unknown function (DUF402) D9C08_08415 PF00005 ABC transporter D9C08_08415 PF00664 ABC transporter transmembrane region D9C08_08420 PF06081 Aromatic acid exporter family member 1 D9C08_08425 PF00202 Aminotransferase class-III D9C08_08430 PF00578 AhpC/TSA family D9C08_08435 PF01475 Ferric uptake regulator family D9C08_08440 PF11023 Zinc-ribbon containing domain D9C08_08445 PF18576 Helix-turn-helix domain D9C08_08445 PF14540 Nucleotidyltransferase-like D9C08_08560 PF07070 SpoOM protein D9C08_08570 PF07875 Coat F domain D9C08_08575 PF03575 Peptidase family S51 D9C08_08580 PF13667 ThiC-associated domain D9C08_08580 PF01964 Radical SAM ThiC family D9C08_08590 PF13040 Fur-regulated basic protein B D9C08_08595 PF06628 Catalase-related immune-responsive D9C08_08595 PF00199 Catalase D9C08_08600 PF00005 ABC transporter D9C08_08605 PF09084 NMT1/THI5 like D9C08_08610 PF00528 Binding-protein-dependent transport system inner membrane component D9C08_08615 PF00296 Luciferase-like monooxygenase D9C08_08625 PF00253 Ribosomal protein S14p/S29e D9C08_08635 PF01381 Helix-turn-helix D9C08_08650 PF08331 Domain of unknown function (DUF1730) D9C08_08655 PF12671 Putative amidase domain D9C08_08660 PF00588 SpoU rRNA Methylase family D9C08_08665 PF13171 Protein of unknown function (DUF4004) D9C08_08670 PF04519 Polymer-forming cytoskeletal D9C08_08680 PF06798 PrkA serine protein kinase C-terminal domain D9C08_08680 PF08298 PrkA AAA domain D9C08_08685 PF04285 Protein of unknown function (DUF444) D9C08_08690 PF01047 MarR family D9C08_08700 PF07690 Major Facilitator Superfamily D9C08_08705 PF03358 NADPH-dependent FMN reductase D9C08_08725 PF00392 Bacterial regulatory proteins, gntR family D9C08_08730 PF00005 ABC transporter D9C08_08735 PF00005 ABC transporter D9C08_08740 PF12679 ABC-2 family transporter protein D9C08_08745 PF00313 'Cold-shock' DNA-binding domain D9C08_08755 PF03180 NLPA lipoprotein D9C08_08760 PF00990 Diguanylate cyclase, GGDEF domain D9C08_08760 PF07694 5TMR of 5TMR-LYT D9C08_08765 PF00375 Sodium:dicarboxylate symporter family D9C08_08770 PF14449 Pre-toxin TG D9C08_08770 PF04740 LXG domain of WXG superfamily D9C08_08770 PF14410 HNH/ENDO VII superfamily nuclease with conserved GHE residues D9C08_08795 PF00589 Phage integrase family D9C08_08795 PF14659 Phage integrase, N-terminal SAM-like domain D9C08_08800 PF18106 Rolling Circle replication initiation protein N-terminal domain D9C08_08800 PF02486 Replication initiation factor D9C08_08825 PF12642 Conjugative transposon protein TcpC D9C08_08835 PF12648 TcpE family D9C08_08845 PF08960 Domain of unknown function (DUF1874) D9C08_08855 PF00877 NlpC/P60 family D9C08_08865 PF14729 Domain of unknown function with cystatin-like fold (DUF4467) D9C08_08875 PF18801 response regulator aspartate phosphatase H, N terminal D9C08_08885 PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) D9C08_08900 PF00746 LPXTG cell wall anchor motif D9C08_08900 PF02872 5'-nucleotidase, C-terminal domain D9C08_08900 PF00149 Calcineurin-like phosphoesterase D9C08_08900 PF00565 Staphylococcal nuclease homologue D9C08_08905 PF04203 Sortase domain D9C08_08910 PF00849 RNA pseudouridylate synthase D9C08_08910 PF01479 S4 domain D9C08_08915 PF17326 Family of unknown function (DUF5365) D9C08_08920 PF00571 CBS domain D9C08_08925 PF13419 Haloacid dehalogenase-like hydrolase D9C08_08930 PF00583 Acetyltransferase (GNAT) family D9C08_08930 PF00795 Carbon-nitrogen hydrolase D9C08_08940 PF00202 Aminotransferase class-III D9C08_08945 PF04309 Glycerol-3-phosphate responsive antiterminator D9C08_08950 PF00230 Major intrinsic protein D9C08_08955 PF00370 FGGY family of carbohydrate kinases, N-terminal domain D9C08_08955 PF02782 FGGY family of carbohydrate kinases, C-terminal domain D9C08_08960 PF16901 C-terminal domain of alpha-glycerophosphate oxidase D9C08_08960 PF01266 FAD dependent oxidoreductase D9C08_08965 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I D9C08_08965 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain D9C08_08965 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II D9C08_08965 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III D9C08_08970 PF07730 Histidine kinase D9C08_08970 PF13185 GAF domain D9C08_08975 PF00196 Bacterial regulatory proteins, luxR family D9C08_08975 PF00072 Response regulator receiver domain D9C08_08980 PF03358 NADPH-dependent FMN reductase D9C08_08985 PF14148 YhdB-like protein D9C08_08990 PF13028 Protein of unknown function (DUF3889) D9C08_08995 PF00877 NlpC/P60 family D9C08_08995 PF01476 LysM domain D9C08_09000 PF02082 Transcriptional regulator D9C08_09010 PF05552 Conserved TM helix D9C08_09015 PF04293 SpoVR like protein D9C08_09020 PF00245 Alkaline phosphatase D9C08_09025 PF00877 NlpC/P60 family D9C08_09025 PF01476 LysM domain D9C08_09030 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D9C08_09030 PF03466 LysR substrate binding domain D9C08_09035 PF00285 Citrate synthase, C-terminal domain D9C08_09050 PF13520 Amino acid permease D9C08_09055 PF00209 Sodium:neurotransmitter symporter family D9C08_09060 PF00392 Bacterial regulatory proteins, gntR family D9C08_09060 PF00155 Aminotransferase class I and II D9C08_09065 PF00583 Acetyltransferase (GNAT) family D9C08_09070 PF17453 Sigma-M inhibitor D9C08_09075 PF13791 Sigma factor regulator C-terminal D9C08_09075 PF13800 Sigma factor regulator N-terminal D9C08_09080 PF08281 Sigma-70, region 4 D9C08_09080 PF04542 Sigma-70 region 2 D9C08_09085 PF00248 Aldo/keto reductase family D9C08_09090 PF01553 Acyltransferase D9C08_09095 PF00571 CBS domain D9C08_09095 PF03471 Transporter associated domain D9C08_09095 PF01595 Cyclin M transmembrane N-terminal domain D9C08_09100 PF13411 MerR HTH family regulatory protein D9C08_09110 PF00571 CBS domain D9C08_09110 PF01595 Cyclin M transmembrane N-terminal domain D9C08_09110 PF03471 Transporter associated domain D9C08_09115 PF02537 CrcB-like protein, Camphor Resistance (CrcB) D9C08_09120 PF02537 CrcB-like protein, Camphor Resistance (CrcB) D9C08_09125 PF03009 Glycerophosphoryl diester phosphodiesterase family D9C08_09130 PF17444 Uncharacterized YhdX-like D9C08_09135 PF00924 Mechanosensitive ion channel D9C08_09140 PF02146 Sir2 family D9C08_09145 PF01522 Polysaccharide deacetylase D9C08_09150 PF01063 Amino-transferase class IV D9C08_09155 PF03553 Na+/H+ antiporter family D9C08_09160 PF00582 Universal stress protein family D9C08_09170 PF00005 ABC transporter D9C08_09170 PF00664 ABC transporter transmembrane region D9C08_09175 PF00664 ABC transporter transmembrane region D9C08_09175 PF00005 ABC transporter D9C08_09180 PF13460 NAD(P)H-binding D9C08_09190 PF00269 Small, acid-soluble spore proteins, alpha/beta type D9C08_09195 PF17277 Family of unknown function (DUF5342) D9C08_09200 PF14398 YheC/D like ATP-grasp D9C08_09205 PF14398 YheC/D like ATP-grasp D9C08_09210 PF04286 Protein of unknown function (DUF445) D9C08_09215 PF06133 Control of competence regulator ComK, YlbF/YmcA D9C08_09230 PF04055 Radical SAM superfamily D9C08_09235 PF00999 Sodium/hydrogen exchanger family D9C08_09240 PF02080 TrkA-C domain D9C08_09250 PF00378 Enoyl-CoA hydratase/isomerase D9C08_09255 PF14120 YhzD-like protein D9C08_09260 PF00005 ABC transporter D9C08_09260 PF13732 Domain of unknown function (DUF4162) D9C08_09270 PF00149 Calcineurin-like phosphoesterase D9C08_09275 PF13514 AAA domain D9C08_09280 PF01966 HD domain D9C08_09285 PF14147 Sporulation protein YhaL D9C08_09295 PF09680 Family of unknown function D9C08_09300 PF09680 Family of unknown function D9C08_09310 PF11667 Putative zincin peptidase D9C08_09315 PF08963 Protein of unknown function (DUF1878) D9C08_09320 PF01047 MarR family D9C08_09325 PF12732 YtxH-like protein D9C08_09335 PF17099 Tryptophan transporter TrpP D9C08_09340 PF00266 Aminotransferase class-V D9C08_09345 PF01230 HIT domain D9C08_09350 PF00005 ABC transporter D9C08_09355 PF05975 Bacterial ABC transporter protein EcsB D9C08_09360 PF12787 EcsC protein family D9C08_09365 PF07687 Peptidase dimerisation domain D9C08_09365 PF01546 Peptidase family M20/M25/M40 D9C08_09380 PF03992 Antibiotic biosynthesis monooxygenase D9C08_09385 PF00905 Penicillin binding protein transpeptidase domain D9C08_09385 PF00912 Transglycosylase D9C08_09390 PF01208 Uroporphyrinogen decarboxylase (URO-D) D9C08_09405 PF17932 Tetracyclin repressor-like, C-terminal domain D9C08_09405 PF00440 Bacterial regulatory proteins, tetR family D9C08_09425 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III D9C08_09425 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal D9C08_09430 PF10086 YhfC intramembrane metalloprotease D9C08_09440 PF05343 M42 glutamyl aminopeptidase D9C08_09445 PF04266 ASCH domain D9C08_09450 PF00375 Sodium:dicarboxylate symporter family D9C08_09455 PF14149 YhfH-like protein D9C08_09460 PF12706 Beta-lactamase superfamily domain D9C08_09465 PF03099 Biotin/lipoate A/B protein ligase family D9C08_09465 PF10437 Bacterial lipoate protein ligase C-terminus D9C08_09470 PF13460 NAD(P)H-binding D9C08_09475 PF00501 AMP-binding enzyme D9C08_09475 PF13193 AMP-binding enzyme C-terminal domain D9C08_09490 PF16491 CAAX prenyl protease N-terminal, five membrane helices D9C08_09490 PF01435 Peptidase family M48 D9C08_09495 PF05922 Peptidase inhibitor I9 D9C08_09495 PF00082 Subtilase family D9C08_09500 PF00583 Acetyltransferase (GNAT) family D9C08_09505 PF00107 Zinc-binding dehydrogenase D9C08_09505 PF08240 Alcohol dehydrogenase GroES-like domain D9C08_09510 PF01497 Periplasmic binding protein D9C08_09520 PF00300 Histidine phosphatase superfamily (branch 1) D9C08_09525 PF00108 Thiolase, N-terminal domain D9C08_09525 PF02803 Thiolase, C-terminal domain D9C08_09530 PF00501 AMP-binding enzyme D9C08_09530 PF13193 AMP-binding enzyme C-terminal domain D9C08_09535 PF02632 BioY family D9C08_09540 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain D9C08_09555 PF08858 IDEAL domain D9C08_09560 PF06338 ComK protein D9C08_09570 PF05901 Excalibur calcium-binding domain D9C08_09575 PF00474 Sodium:solute symporter family D9C08_09580 PF11755 Protein of unknown function (DUF3311) D9C08_09590 PF09335 SNARE associated Golgi protein D9C08_09595 PF10502 Signal peptidase, peptidase S26 D9C08_09600 PF01494 FAD binding domain D9C08_09605 PF01047 MarR family D9C08_09625 PF07690 Major Facilitator Superfamily D9C08_09630 PF01408 Oxidoreductase family, NAD-binding Rossmann fold D9C08_09630 PF02894 Oxidoreductase family, C-terminal alpha/beta domain D9C08_09635 PF05116 Sucrose-6F-phosphate phosphohydrolase D9C08_09640 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family D9C08_09645 PF00356 Bacterial regulatory proteins, lacI family D9C08_09650 PF05145 Transition state regulatory protein AbrB D9C08_09655 PF07690 Major Facilitator Superfamily D9C08_09660 PF12793 Sugar transport-related sRNA regulator N-term D9C08_09660 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle D9C08_09665 PF03860 Domain of Unknown Function (DUF326) D9C08_09670 PF02915 Rubrerythrin D9C08_09675 PF12705 PD-(D/E)XK nuclease superfamily D9C08_09675 PF13361 UvrD-like helicase C-terminal domain D9C08_09680 PF13361 UvrD-like helicase C-terminal domain D9C08_09680 PF12705 PD-(D/E)XK nuclease superfamily D9C08_09680 PF00580 UvrD/REP helicase N-terminal domain D9C08_09685 PF12320 Type 5 capsule protein repressor C-terminal domain D9C08_09685 PF00149 Calcineurin-like phosphoesterase D9C08_09690 PF13476 AAA domain D9C08_09700 PF10676 Spore germination protein gerPA/gerPF D9C08_09705 PF10970 Spore germination protein GerPE D9C08_09715 PF10737 Spore germination protein GerPC D9C08_09720 PF10803 Spore germination GerPB D9C08_09725 PF10676 Spore germination protein gerPA/gerPF D9C08_09730 PF09388 Spo0E like sporulation regulatory protein D9C08_09735 PF08757 CotH kinase protein D9C08_09740 PF01557 Fumarylacetoacetate (FAA) hydrolase family D9C08_09745 PF07457 Protein of unknown function (DUF1516) D9C08_09750 PF17936 Bacterial Ig domain D9C08_09750 PF00082 Subtilase family D9C08_09760 PF10949 Protein of unknown function (DUF2777) D9C08_09765 PF13537 Glutamine amidotransferase domain D9C08_09765 PF00733 Asparagine synthase D9C08_09775 PF01554 MatE D9C08_09780 PF02311 AraC-like ligand binding domain D9C08_09780 PF12833 Helix-turn-helix domain D9C08_09785 PF00356 Bacterial regulatory proteins, lacI family D9C08_09790 PF02894 Oxidoreductase family, C-terminal alpha/beta domain D9C08_09790 PF01408 Oxidoreductase family, NAD-binding Rossmann fold D9C08_09795 PF05163 DinB family D9C08_09800 PF01810 LysE type translocator D9C08_09805 PF00155 Aminotransferase class I and II D9C08_09805 PF00392 Bacterial regulatory proteins, gntR family D9C08_09810 PF13599 Pentapeptide repeats (9 copies) D9C08_09815 PF08386 TAP-like protein D9C08_09815 PF00561 alpha/beta hydrolase fold D9C08_09825 PF13673 Acetyltransferase (GNAT) domain D9C08_09830 PF02219 Methylenetetrahydrofolate reductase D9C08_09830 PF02574 Homocysteine S-methyltransferase D9C08_09835 PF04461 Protein of unknown function (DUF520) D9C08_09840 PF17783 CvfB-like winged helix domain D9C08_09840 PF13509 S1 domain D9C08_09855 PF17418 Sporulation delaying protein SdpA D9C08_09860 PF03551 Transcriptional regulator PadR-like family D9C08_09870 PF12650 Domain of unknown function (DUF3784) D9C08_09875 PF02868 Thermolysin metallopeptidase, alpha-helical domain D9C08_09875 PF01447 Thermolysin metallopeptidase, catalytic domain D9C08_09875 PF07504 Fungalysin/Thermolysin Propeptide Motif D9C08_09875 PF03413 Peptidase propeptide and YPEB domain D9C08_09880 PF02645 Uncharacterised protein, DegV family COG1307 D9C08_09885 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) D9C08_09885 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 D9C08_09890 PF12690 Intracellular proteinase inhibitor D9C08_09895 PF12758 Protein of unknown function (DUF3813) D9C08_09905 PF00326 Prolyl oligopeptidase family D9C08_09910 PF01883 Iron-sulfur cluster assembly protein D9C08_09920 PF01565 FAD binding domain D9C08_09930 PF02774 Semialdehyde dehydrogenase, dimerisation domain D9C08_09930 PF01118 Semialdehyde dehydrogenase, NAD binding domain D9C08_09935 PF01960 ArgJ family D9C08_09940 PF00696 Amino acid kinase family D9C08_09945 PF00202 Aminotransferase class-III D9C08_09950 PF00117 Glutamine amidotransferase class-I D9C08_09950 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain D9C08_09955 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain D9C08_09955 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain D9C08_09960 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain D9C08_09960 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain D9C08_09970 PF14168 YjzC-like protein D9C08_09975 PF11151 Protein of unknown function (DUF2929) D9C08_09990 PF02608 ABC transporter substrate-binding protein PnrA-like D9C08_09995 PF10815 ComZ D9C08_10005 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III D9C08_10005 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal D9C08_10010 PF02801 Beta-ketoacyl synthase, C-terminal domain D9C08_10010 PF00109 Beta-ketoacyl synthase, N-terminal domain D9C08_10015 PF10026 Predicted Zn-dependent protease (DUF2268) D9C08_10020 PF00005 ABC transporter D9C08_10020 PF08352 Oligopeptide/dipeptide transporter, C-terminal region D9C08_10025 PF00005 ABC transporter D9C08_10025 PF08352 Oligopeptide/dipeptide transporter, C-terminal region D9C08_10030 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle D9C08_10035 PF00528 Binding-protein-dependent transport system inner membrane component D9C08_10040 PF00528 Binding-protein-dependent transport system inner membrane component D9C08_10040 PF12911 N-terminal TM domain of oligopeptide transport permease C D9C08_10045 PF12227 Protein of unknown function (DUF3603) D9C08_10050 PF00579 tRNA synthetases class I (W and Y) D9C08_10055 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle D9C08_10060 PF00528 Binding-protein-dependent transport system inner membrane component D9C08_10065 PF12911 N-terminal TM domain of oligopeptide transport permease C D9C08_10065 PF00528 Binding-protein-dependent transport system inner membrane component D9C08_10070 PF00005 ABC transporter D9C08_10070 PF08352 Oligopeptide/dipeptide transporter, C-terminal region D9C08_10075 PF08352 Oligopeptide/dipeptide transporter, C-terminal region D9C08_10075 PF00005 ABC transporter D9C08_10080 PF07690 Major Facilitator Superfamily D9C08_10090 PF03960 ArsC family D9C08_10095 PF03741 Integral membrane protein TerC family D9C08_10105 PF05389 Negative regulator of genetic competence (MecA) D9C08_10115 PF06054 Competence protein CoiA-like family D9C08_10120 PF08439 Oligopeptidase F D9C08_10120 PF01432 Peptidase family M3 D9C08_10140 PF01152 Bacterial-like globin D9C08_10145 PF01464 Transglycosylase SLT domain D9C08_10150 PF01928 CYTH domain D9C08_10160 PF04607 Region found in RelA / SpoT proteins D9C08_10165 PF01513 ATP-NAD kinase D9C08_10170 PF00849 RNA pseudouridylate synthase D9C08_10175 PF00149 Calcineurin-like phosphoesterase D9C08_10180 PF02254 TrkA-N domain D9C08_10180 PF02080 TrkA-C domain D9C08_10180 PF00999 Sodium/hydrogen exchanger family D9C08_10185 PF03070 TENA/THI-4/PQQC family D9C08_10190 PF02581 Thiamine monophosphate synthase D9C08_10195 PF01266 FAD dependent oxidoreductase D9C08_10200 PF02597 ThiS family D9C08_10205 PF05690 Thiazole biosynthesis protein ThiG D9C08_10210 PF00899 ThiF family D9C08_10215 PF08543 Phosphomethylpyrimidine kinase D9C08_10225 PF14153 Spore coat protein CotO D9C08_10230 PF10612 Spore coat protein Z D9C08_10235 PF10612 Spore coat protein Z D9C08_10240 PF07552 Spore Coat Protein X and V domain D9C08_10255 PF07098 Protein of unknown function (DUF1360) D9C08_10270 PF14069 Stage VI sporulation protein F D9C08_10275 PF00580 UvrD/REP helicase N-terminal domain D9C08_10275 PF13361 UvrD-like helicase C-terminal domain D9C08_10285 PF13673 Acetyltransferase (GNAT) domain D9C08_10295 PF00756 Putative esterase D9C08_10300 PF01053 Cys/Met metabolism PLP-dependent enzyme D9C08_10305 PF01053 Cys/Met metabolism PLP-dependent enzyme D9C08_10310 PF13302 Acetyltransferase (GNAT) domain D9C08_10315 PF05684 Protein of unknown function (DUF819) D9C08_10350 PF01381 Helix-turn-helix D9C08_10380 PF00534 Glycosyl transferases group 1 D9C08_10430 PF17247 Family of unknown function (DUF5316) D9C08_10475 PF03992 Antibiotic biosynthesis monooxygenase D9C08_10485 PF05043 Mga helix-turn-helix domain D9C08_10485 PF08279 HTH domain D9C08_10485 PF00874 PRD domain D9C08_10485 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 D9C08_10495 PF01238 Phosphomannose isomerase type I D9C08_10500 PF11208 Protein of unknown function (DUF2992) D9C08_10510 PF00872 Transposase, Mutator family D9C08_10515 PF13302 Acetyltransferase (GNAT) domain D9C08_10525 PF04073 Aminoacyl-tRNA editing domain D9C08_10530 PF13783 Domain of unknown function (DUF4177) D9C08_10535 PF14154 Domain of unknown function (DUF4306) D9C08_10540 PF01040 UbiA prenyltransferase family D9C08_10550 PF13739 Deacetylase PdaC D9C08_10550 PF01522 Polysaccharide deacetylase D9C08_10550 PF11738 Protein of unknown function (DUF3298) D9C08_10555 PF10901 Protein of unknown function (DUF2690) D9C08_10560 PF14070 Putative motility protein D9C08_10570 PF10990 Protein of unknown function (DUF2809) D9C08_10575 PF14172 Domain of unknown function (DUF4309) D9C08_10580 PF04879 Molybdopterin oxidoreductase Fe4S4 domain D9C08_10580 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region D9C08_10580 PF00384 Molybdopterin oxidoreductase D9C08_10580 PF01568 Molydopterin dinucleotide binding domain D9C08_10580 PF12838 4Fe-4S dicluster domain D9C08_10585 PF07849 Protein of unknown function (DUF1641) D9C08_10590 PF11611 Domain of unknown function (DUF4352) D9C08_10595 PF00293 NUDIX domain D9C08_10605 PF00067 Cytochrome P450 D9C08_10610 PF04101 Glycosyltransferase family 28 C-terminal domain D9C08_10620 PF02602 Uroporphyrinogen-III synthase HemD D9C08_10630 PF03649 Uncharacterised protein family (UPF0014) D9C08_10635 PF00005 ABC transporter D9C08_10640 PF13536 Putative multidrug resistance efflux transporter D9C08_10650 PF07849 Protein of unknown function (DUF1641) D9C08_10655 PF07992 Pyridine nucleotide-disulphide oxidoreductase D9C08_10660 PF02614 Glucuronate isomerase D9C08_10670 PF02615 Malate/L-lactate dehydrogenase D9C08_10675 PF08240 Alcohol dehydrogenase GroES-like domain D9C08_10675 PF00107 Zinc-binding dehydrogenase D9C08_10680 PF03786 D-mannonate dehydratase (UxuA) D9C08_10685 PF00106 short chain dehydrogenase D9C08_10690 PF07690 Major Facilitator Superfamily D9C08_10695 PF00356 Bacterial regulatory proteins, lacI family D9C08_10700 PF08125 Mannitol dehydrogenase C-terminal domain D9C08_10700 PF01232 Mannitol dehydrogenase Rossmann domain D9C08_10705 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus D9C08_10705 PF08666 SAF domain D9C08_10710 PF01925 Sulfite exporter TauE/SafE D9C08_10720 PF05163 DinB family D9C08_10740 PF18801 response regulator aspartate phosphatase H, N terminal D9C08_10755 PF01476 LysM domain D9C08_10755 PF01510 N-acetylmuramoyl-L-alanine amidase D9C08_10755 PF01471 Putative peptidoglycan binding domain D9C08_10760 PF08000 Bacterial PH domain D9C08_10765 PF05908 Poly-gamma-glutamate hydrolase D9C08_10770 PF05067 Manganese containing catalase D9C08_10775 PF06114 IrrE N-terminal-like domain D9C08_10780 PF01381 Helix-turn-helix D9C08_10795 PF01695 IstB-like ATP binding protein D9C08_10810 PF17356 Phage-like element PBSX protein XtrA D9C08_10815 PF08281 Sigma-70, region 4 D9C08_10820 PF03592 Terminase small subunit D9C08_10820 PF10668 Phage terminase small subunit D9C08_10825 PF17288 Terminase RNAseH like domain D9C08_10825 PF04466 Phage terminase large subunit D9C08_10830 PF04860 Phage portal protein D9C08_10835 PF14550 Putative phage serine protease XkdF D9C08_10840 PF05065 Phage capsid family D9C08_10845 PF11436 Protein of unknown function (DUF3199) D9C08_10850 PF12206 Domain of unknown function (DUF3599) D9C08_10855 PF04883 Bacteriophage HK97-gp10, putative tail-component D9C08_10870 PF04984 Phage tail sheath protein subtilisin-like domain D9C08_10870 PF17481 Phage tail sheath protein beta-sandwich domain D9C08_10870 PF17482 Phage tail sheath C-terminal domain D9C08_10875 PF09393 Phage tail tube protein D9C08_10880 PF08890 Phage XkdN-like tail assembly chaperone protein, TAC D9C08_10890 PF01464 Transglycosylase SLT domain D9C08_10890 PF01464 Transglycosylase SLT domain D9C08_10890 PF01464 Transglycosylase SLT domain D9C08_10895 PF01476 LysM domain D9C08_10905 PF10844 Protein of unknown function (DUF2577) D9C08_10910 PF10934 Protein of unknown function (DUF2634) D9C08_10915 PF04865 Baseplate J-like protein D9C08_10920 PF10076 Uncharacterised protein conserved in bacteria (DUF2313) D9C08_10935 PF09636 XkdW protein D9C08_10940 PF09693 Phage uncharacterised protein (Phage_XkdX) D9C08_10950 PF10779 Haemolysin XhlA D9C08_10955 PF04688 SPP1 phage holin D9C08_10960 PF01471 Putative peptidoglycan binding domain D9C08_10960 PF01476 LysM domain D9C08_10960 PF01510 N-acetylmuramoyl-L-alanine amidase D9C08_10970 PF14185 Antitoxin SpoIISB, type II toxin-antitoxin system D9C08_10975 PF14171 Toxin SpoIISA, type II toxin-antitoxin system D9C08_10980 PF01384 Phosphate transporter family D9C08_10985 PF01865 Protein of unknown function DUF47 D9C08_10990 PF13520 Amino acid permease D9C08_10995 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily D9C08_11000 PF13231 Dolichyl-phosphate-mannose-protein mannosyltransferase D9C08_11005 PF00535 Glycosyl transferase family 2 D9C08_11010 PF13180 PDZ domain D9C08_11015 PF03807 NADP oxidoreductase coenzyme F420-dependent D9C08_11015 PF14748 Pyrroline-5-carboxylate reductase dimerisation D9C08_11020 PF04951 D-aminopeptidase D9C08_11025 PF00528 Binding-protein-dependent transport system inner membrane component D9C08_11030 PF00528 Binding-protein-dependent transport system inner membrane component D9C08_11030 PF12911 N-terminal TM domain of oligopeptide transport permease C D9C08_11035 PF08352 Oligopeptide/dipeptide transporter, C-terminal region D9C08_11035 PF00005 ABC transporter D9C08_11040 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle D9C08_11045 PF17676 LD-carboxypeptidase C-terminal domain D9C08_11045 PF02016 LD-carboxypeptidase N-terminal domain D9C08_11050 PF13378 Enolase C-terminal domain-like D9C08_11050 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain D9C08_11055 PF00877 NlpC/P60 family D9C08_11060 PF00005 ABC transporter D9C08_11060 PF08352 Oligopeptide/dipeptide transporter, C-terminal region D9C08_11065 PF10282 Lactonase, 7-bladed beta-propeller D9C08_11075 PF03061 Thioesterase superfamily D9C08_11080 PF00970 Oxidoreductase FAD-binding domain D9C08_11080 PF00042 Globin D9C08_11080 PF00175 Oxidoreductase NAD-binding domain D9C08_11090 PF04239 Protein of unknown function (DUF421) D9C08_11095 PF12867 DinB superfamily D9C08_11100 PF13302 Acetyltransferase (GNAT) domain D9C08_11105 PF00893 Small Multidrug Resistance protein D9C08_11110 PF00893 Small Multidrug Resistance protein D9C08_11115 PF01842 ACT domain D9C08_11115 PF00551 Formyl transferase D9C08_11120 PF01472 PUA domain D9C08_11120 PF00696 Amino acid kinase family D9C08_11125 PF00171 Aldehyde dehydrogenase family D9C08_11130 PF02566 OsmC-like protein D9C08_11135 PF01047 MarR family D9C08_11140 PF02566 OsmC-like protein D9C08_11150 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region D9C08_11155 PF01717 Cobalamin-independent synthase, Catalytic domain D9C08_11155 PF08267 Cobalamin-independent synthase, N-terminal domain D9C08_11160 PF00082 Subtilase family D9C08_11165 PF01740 STAS domain D9C08_11170 PF02361 Cobalt transport protein D9C08_11175 PF00005 ABC transporter D9C08_11180 PF09819 ABC-type cobalt transport system, permease component D9C08_11185 PF07615 YKOF-related Family D9C08_11190 PF00072 Response regulator receiver domain D9C08_11190 PF00486 Transcriptional regulatory protein, C terminal D9C08_11195 PF00512 His Kinase A (phospho-acceptor) domain D9C08_11195 PF00672 HAMP domain D9C08_11195 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D9C08_11200 PF03413 Peptidase propeptide and YPEB domain D9C08_11205 PF03413 Peptidase propeptide and YPEB domain D9C08_11210 PF11132 Transcriptional regulator protein (SplA) D9C08_11220 PF00571 CBS domain D9C08_11220 PF03448 MgtE intracellular N domain D9C08_11220 PF01769 Divalent cation transporter D9C08_11225 PF13411 MerR HTH family regulatory protein D9C08_11240 PF01047 MarR family D9C08_11245 PF06925 Monogalactosyldiacylglycerol (MGDG) synthase D9C08_11255 PF00149 Calcineurin-like phosphoesterase D9C08_11265 PF00535 Glycosyl transferase family 2 D9C08_11270 PF01068 ATP dependent DNA ligase domain D9C08_11275 PF02735 Ku70/Ku80 beta-barrel domain D9C08_11280 PF00563 EAL domain D9C08_11280 PF03707 Bacterial signalling protein N terminal repeat D9C08_11280 PF00990 Diguanylate cyclase, GGDEF domain D9C08_11285 PF09335 SNARE associated Golgi protein D9C08_11290 PF03741 Integral membrane protein TerC family D9C08_11295 PF04542 Sigma-70 region 2 D9C08_11300 PF12791 Anti-sigma factor N-terminus D9C08_11305 PF00269 Small, acid-soluble spore proteins, alpha/beta type D9C08_11310 PF08876 Domain of unknown function (DUF1836) D9C08_11315 PF01435 Peptidase family M48 D9C08_11320 PF02386 Cation transport protein D9C08_11335 PF01757 Acyltransferase family D9C08_11340 PF13426 PAS domain D9C08_11340 PF13188 PAS domain D9C08_11340 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D9C08_11340 PF00989 PAS fold D9C08_11340 PF00512 His Kinase A (phospho-acceptor) domain D9C08_11345 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain D9C08_11345 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain D9C08_11355 PF01008 Initiation factor 2 subunit family D9C08_11360 PF01636 Phosphotransferase enzyme family D9C08_11365 PF00795 Carbon-nitrogen hydrolase D9C08_11370 PF00155 Aminotransferase class I and II D9C08_11375 PF00016 Ribulose bisphosphate carboxylase large chain, catalytic domain D9C08_11375 PF02788 Ribulose bisphosphate carboxylase large chain, N-terminal domain D9C08_11385 PF00596 Class II Aldolase and Adducin N-terminal domain D9C08_11390 PF03079 ARD/ARD' family D9C08_11395 PF06803 Protein of unknown function (DUF1232) D9C08_11400 PF09388 Spo0E like sporulation regulatory protein D9C08_11410 PF02743 Cache domain D9C08_11410 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D9C08_11410 PF00512 His Kinase A (phospho-acceptor) domain D9C08_11415 PF01047 MarR family D9C08_11420 PF00691 OmpA family D9C08_11420 PF13677 Membrane MotB of proton-channel complex MotA/MotB D9C08_11425 PF01618 MotA/TolQ/ExbB proton channel family D9C08_11430 PF17871 AAA lid domain D9C08_11430 PF10431 C-terminal, D2-small domain, of ClpB protein D9C08_11430 PF00004 ATPase family associated with various cellular activities (AAA) D9C08_11430 PF07724 AAA domain (Cdc48 subfamily) D9C08_11440 PF06508 Queuosine biosynthesis protein QueC D9C08_11445 PF01242 6-pyruvoyl tetrahydropterin synthase D9C08_11450 PF04055 Radical SAM superfamily D9C08_11455 PF14489 QueF-like protein D9C08_11460 PF11514 Protein of unknown function (DUF3219) D9C08_11465 PF09953 Uncharacterized protein conserved in bacteria (DUF2187) D9C08_11475 PF07486 Cell Wall Hydrolase D9C08_11480 PF01943 Polysaccharide biosynthesis protein D9C08_11485 PF00578 AhpC/TSA family D9C08_11500 PF00557 Metallopeptidase family M24 D9C08_11500 PF01321 Creatinase/Prolidase N-terminal domain D9C08_11505 PF00356 Bacterial regulatory proteins, lacI family D9C08_11505 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family D9C08_11515 PF00367 phosphotransferase system, EIIB D9C08_11515 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 D9C08_11515 PF02378 Phosphotransferase system, EIIC D9C08_11520 PF00381 PTS HPr component phosphorylation site D9C08_11525 PF02896 PEP-utilising enzyme, TIM barrel domain D9C08_11525 PF00391 PEP-utilising enzyme, mobile domain D9C08_11525 PF05524 PEP-utilising enzyme, N-terminal D9C08_11530 PF11132 Transcriptional regulator protein (SplA) D9C08_11540 PF00583 Acetyltransferase (GNAT) family D9C08_11545 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain D9C08_11545 PF02743 Cache domain D9C08_11545 PF00672 HAMP domain D9C08_11550 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase D9C08_11550 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase D9C08_11565 PF00872 Transposase, Mutator family D9C08_11575 PF00188 Cysteine-rich secretory protein family D9C08_11580 PF03717 Penicillin-binding Protein dimerisation domain D9C08_11580 PF00905 Penicillin binding protein transpeptidase domain D9C08_11585 PF00989 PAS fold D9C08_11585 PF08447 PAS fold D9C08_11585 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D9C08_11585 PF00512 His Kinase A (phospho-acceptor) domain D9C08_11590 PF00155 Aminotransferase class I and II D9C08_11600 PF00072 Response regulator receiver domain D9C08_11600 PF01584 CheW-like domain D9C08_11605 PF14177 YkyB-like protein D9C08_11610 PF07690 Major Facilitator Superfamily D9C08_11615 PF03734 L,D-transpeptidase catalytic domain D9C08_11615 PF01476 LysM domain D9C08_11620 PF00149 Calcineurin-like phosphoesterase D9C08_11620 PF10518 TAT (twin-arginine translocation) pathway signal sequence D9C08_11630 PF00563 EAL domain D9C08_11630 PF10388 EAL-domain associated signalling protein domain D9C08_11635 PF08796 Protein of unknown function (DUF1797) D9C08_11640 PF04308 Ribonuclease H-like D9C08_11645 PF14156 Antirepressor AbbA D9C08_11655 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D9C08_11655 PF03466 LysR substrate binding domain D9C08_11660 PF00258 Flavodoxin D9C08_11670 PF00258 Flavodoxin D9C08_11675 PF14602 Hexapeptide repeat of succinyl-transferase D9C08_11675 PF00132 Bacterial transferase hexapeptide (six repeats) D9C08_11675 PF08503 Tetrahydrodipicolinate succinyltransferase N-terminal D9C08_11680 PF07687 Peptidase dimerisation domain D9C08_11680 PF01546 Peptidase family M20/M25/M40 D9C08_11685 PF03698 Uncharacterised protein family (UPF0180) D9C08_11690 PF00924 Mechanosensitive ion channel D9C08_11695 PF00578 AhpC/TSA family D9C08_11695 PF10417 C-terminal domain of 1-Cys peroxiredoxin D9C08_11700 PF00578 AhpC/TSA family D9C08_11720 PF12804 MobA-like NTP transferase domain D9C08_11725 PF00899 ThiF family D9C08_11730 PF03454 MoeA C-terminal region (domain IV) D9C08_11730 PF03453 MoeA N-terminal region (domain I and II) D9C08_11730 PF00994 Probable molybdopterin binding domain D9C08_11735 PF03205 Molybdopterin guanine dinucleotide synthesis protein B D9C08_11740 PF02391 MoaE protein D9C08_11745 PF02597 ThiS family D9C08_11750 PF00005 ABC transporter D9C08_11750 PF00664 ABC transporter transmembrane region D9C08_11755 PF00664 ABC transporter transmembrane region D9C08_11755 PF00005 ABC transporter D9C08_11760 PF04893 Yip1 domain D9C08_11765 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion D9C08_11770 PF00005 ABC transporter D9C08_11775 PF02687 FtsX-like permease family D9C08_11775 PF12704 MacB-like periplasmic core domain D9C08_11780 PF08220 DeoR-like helix-turn-helix domain D9C08_11780 PF00455 DeoR C terminal sensor domain D9C08_11785 PF00294 pfkB family carbohydrate kinase D9C08_11790 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 D9C08_11790 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit D9C08_11795 PF10502 Signal peptidase, peptidase S26 D9C08_11805 PF12848 ABC transporter D9C08_11805 PF00005 ABC transporter D9C08_11810 PF02558 Ketopantoate reductase PanE/ApbA D9C08_11810 PF08546 Ketopantoate reductase PanE/ApbA C terminal D9C08_11820 PF02073 Thermophilic metalloprotease (M29) D9C08_11825 PF17447 Uncharacterized YkpC-like D9C08_11835 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin D9C08_11835 PF18277 AbrB C-terminal domain D9C08_11840 PF00989 PAS fold D9C08_11840 PF00512 His Kinase A (phospho-acceptor) domain D9C08_11840 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D9C08_11845 PF01609 Transposase DDE domain D9C08_11855 PF06094 Gamma-glutamyl cyclotransferase, AIG2-like D9C08_11860 PF02080 TrkA-C domain D9C08_11860 PF02254 TrkA-N domain D9C08_11865 PF13382 Adenine deaminase C-terminal domain D9C08_11865 PF01979 Amidohydrolase family D9C08_11870 PF00753 Metallo-beta-lactamase superfamily D9C08_11870 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain D9C08_11870 PF17770 Ribonuclease J C-terminal domain D9C08_11885 PF01327 Polypeptide deformylase D9C08_11895 PF10368 Putative cell-wall binding lipoprotein D9C08_11900 PF00676 Dehydrogenase E1 component D9C08_11905 PF02779 Transketolase, pyrimidine binding domain D9C08_11905 PF02780 Transketolase, C-terminal domain D9C08_11910 PF02817 e3 binding domain D9C08_11910 PF00364 Biotin-requiring enzyme D9C08_11910 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) D9C08_11915 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain D9C08_11915 PF07992 Pyridine nucleotide-disulphide oxidoreductase D9C08_11925 PF13790 SR1 protein D9C08_11935 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain D9C08_11935 PF01276 Orn/Lys/Arg decarboxylase, major domain D9C08_11940 PF05256 Uncharacterised protein family (UPF0223) D9C08_11945 PF06335 Protein of unknown function (DUF1054) D9C08_11955 PF00459 Inositol monophosphatase family D9C08_11960 PF00583 Acetyltransferase (GNAT) family D9C08_11965 PF04072 Leucine carboxyl methyltransferase D9C08_11975 PF07504 Fungalysin/Thermolysin Propeptide Motif D9C08_11975 PF01447 Thermolysin metallopeptidase, catalytic domain D9C08_11975 PF03413 Peptidase propeptide and YPEB domain D9C08_11975 PF02868 Thermolysin metallopeptidase, alpha-helical domain D9C08_11995 PF13490 Putative zinc-finger D9C08_12005 PF17259 Family of unknown function (DUF5325) D9C08_12015 PF14036 YlaH-like protein D9C08_12020 PF09963 Uncharacterized protein conserved in bacteria (DUF2197) D9C08_12030 PF13638 PIN domain D9C08_12030 PF02562 PhoH-like protein D9C08_12040 PF04960 Glutaminase D9C08_12045 PF07408 Protein of unknown function (DUF1507) D9C08_12050 PF01098 Cell cycle protein D9C08_12055 PF00364 Biotin-requiring enzyme D9C08_12055 PF02436 Conserved carboxylase domain D9C08_12055 PF00682 HMGL-like D9C08_12055 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain D9C08_12055 PF02785 Biotin carboxylase C-terminal domain D9C08_12055 PF00289 Biotin carboxylase, N-terminal domain D9C08_12065 PF02628 Cytochrome oxidase assembly protein D9C08_12070 PF01040 UbiA prenyltransferase family D9C08_12075 PF00116 Cytochrome C oxidase subunit II, periplasmic domain D9C08_12075 PF02790 Cytochrome C oxidase subunit II, transmembrane domain D9C08_12075 PF00034 Cytochrome c D9C08_12080 PF00115 Cytochrome C and Quinol oxidase polypeptide I D9C08_12085 PF00510 Cytochrome c oxidase subunit III D9C08_12090 PF03626 Prokaryotic Cytochrome C oxidase subunit IV D9C08_12095 PF09678 Cytochrome c oxidase caa3 assembly factor (Caa3_CtaG) D9C08_12100 PF08868 YugN-like family D9C08_12105 PF00571 CBS domain D9C08_12110 PF00188 Cysteine-rich secretory protein family D9C08_12110 PF14504 CAP-associated N-terminal D9C08_12115 PF14071 Putative coat protein D9C08_12120 PF14003 YlbE-like protein D9C08_12125 PF06133 Control of competence regulator ComK, YlbF/YmcA D9C08_12130 PF09902 Uncharacterized protein conserved in bacteria (DUF2129) D9C08_12140 PF01467 Cytidylyltransferase-like D9C08_12145 PF07670 Nucleoside recognition D9C08_12150 PF01734 Patatin-like phospholipase D9C08_12155 PF05362 Lon protease (S16) C-terminal proteolytic domain D9C08_12155 PF13180 PDZ domain D9C08_12160 PF05636 HIGH Nucleotidyl Transferase D9C08_12170 PF02620 Large ribosomal RNA subunit accumulation protein YceD D9C08_12175 PF01783 Ribosomal L32p protein family D9C08_12185 PF00583 Acetyltransferase (GNAT) family D9C08_12190 PF08546 Ketopantoate reductase PanE/ApbA C terminal D9C08_12190 PF02558 Ketopantoate reductase PanE/ApbA D9C08_12195 PF10079 Bacillithiol biosynthesis BshC D9C08_12200 PF02381 MraZ protein, putative antitoxin-like D9C08_12205 PF01795 MraW methylase family D9C08_12220 PF03793 PASTA domain D9C08_12220 PF00905 Penicillin binding protein transpeptidase domain D9C08_12220 PF03717 Penicillin-binding Protein dimerisation domain D9C08_12225 PF01225 Mur ligase family, catalytic domain D9C08_12225 PF02875 Mur ligase family, glutamate ligase domain D9C08_12225 PF08245 Mur ligase middle domain D9C08_12230 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 D9C08_12230 PF00953 Glycosyl transferase family 4 D9C08_12235 PF08245 Mur ligase middle domain D9C08_12235 PF02875 Mur ligase family, glutamate ligase domain D9C08_12240 PF01098 Cell cycle protein D9C08_12245 PF04101 Glycosyltransferase family 28 C-terminal domain D9C08_12245 PF03033 Glycosyltransferase family 28 N-terminal domain D9C08_12250 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain D9C08_12250 PF01565 FAD binding domain D9C08_12255 PF08478 POTRA domain, FtsQ-type D9C08_12260 PF05949 Bacterial protein of unknown function (DUF881) D9C08_12265 PF05949 Bacterial protein of unknown function (DUF881) D9C08_12270 PF06947 Protein of unknown function (DUF1290) D9C08_12275 PF02491 SHS2 domain inserted in FTSA D9C08_12280 PF00091 Tubulin/FtsZ family, GTPase domain D9C08_12280 PF12327 FtsZ family, C-terminal domain D9C08_12285 PF05922 Peptidase inhibitor I9 D9C08_12285 PF00082 Subtilase family D9C08_12290 PF03419 Sporulation factor SpoIIGA D9C08_12295 PF04542 Sigma-70 region 2 D9C08_12295 PF04545 Sigma-70, region 4 D9C08_12300 PF04539 Sigma-70 region 3 D9C08_12300 PF04542 Sigma-70 region 2 D9C08_12300 PF04545 Sigma-70, region 4 D9C08_12305 PF00005 ABC transporter D9C08_12310 PF07687 Peptidase dimerisation domain D9C08_12310 PF01546 Peptidase family M20/M25/M40 D9C08_12315 PF05239 PRC-barrel domain D9C08_12325 PF01168 Alanine racemase, N-terminal domain D9C08_12330 PF04472 Cell division protein SepF D9C08_12335 PF02325 YGGT family D9C08_12340 PF01479 S4 domain D9C08_12340 PF17774 Putative RNA-binding domain in YlmH D9C08_12345 PF05103 DivIVA protein D9C08_12350 PF00133 tRNA synthetases class I (I, L, M and V) D9C08_12350 PF08264 Anticodon-binding domain of tRNA D9C08_12360 PF01258 Prokaryotic dksA/traR C4-type zinc finger D9C08_12365 PF01252 Signal peptidase (SPase) II D9C08_12370 PF01479 S4 domain D9C08_12370 PF00849 RNA pseudouridylate synthase D9C08_12375 PF00156 Phosphoribosyl transferase domain D9C08_12380 PF00860 Permease family D9C08_12385 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain D9C08_12385 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain D9C08_12390 PF01979 Amidohydrolase family D9C08_12395 PF00117 Glutamine amidotransferase class-I D9C08_12395 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain D9C08_12400 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain D9C08_12400 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain D9C08_12400 PF02142 MGS-like domain D9C08_12405 PF00175 Oxidoreductase NAD-binding domain D9C08_12405 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B D9C08_12410 PF01180 Dihydroorotate dehydrogenase D9C08_12415 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family D9C08_12420 PF00156 Phosphoribosyl transferase domain D9C08_12425 PF01507 Phosphoadenosine phosphosulfate reductase family D9C08_12430 PF01384 Phosphate transporter family D9C08_12435 PF14306 PUA-like domain D9C08_12435 PF01747 ATP-sulfurylase D9C08_12450 PF01903 CbiX D9C08_12465 PF00689 Cation transporting ATPase, C-terminus D9C08_12465 PF00690 Cation transporter/ATPase, N-terminus D9C08_12470 PF08340 Domain of unknown function (DUF1732) D9C08_12470 PF03755 YicC-like family, N-terminal region D9C08_12475 PF04025 Domain of unknown function (DUF370) D9C08_12480 PF00625 Guanylate kinase D9C08_12485 PF01192 RNA polymerase Rpb6 D9C08_12490 PF02441 Flavoprotein D9C08_12490 PF04127 DNA / pantothenate metabolism flavoprotein D9C08_12495 PF00271 Helicase conserved C-terminal domain D9C08_12495 PF17764 3′ DNA-binding domain (3′BD) D9C08_12495 PF18074 Primosomal protein N C-terminal domain D9C08_12495 PF04851 Type III restriction enzyme, res subunit D9C08_12495 PF18319 PriA DNA helicase Cys-rich region (CRR) domain D9C08_12500 PF01327 Polypeptide deformylase D9C08_12505 PF02911 Formyl transferase, C-terminal domain D9C08_12505 PF00551 Formyl transferase D9C08_12510 PF01029 NusB family D9C08_12510 PF01189 16S rRNA methyltransferase RsmB/F D9C08_12515 PF04055 Radical SAM superfamily D9C08_12525 PF00069 Protein kinase domain D9C08_12525 PF03793 PASTA domain D9C08_12530 PF03193 RsgA GTPase D9C08_12530 PF16745 RsgA N-terminal domain D9C08_12535 PF00834 Ribulose-phosphate 3 epimerase family D9C08_12540 PF04265 Thiamin pyrophosphokinase, vitamin B1 binding domain D9C08_12540 PF04263 Thiamin pyrophosphokinase, catalytic domain D9C08_12545 PF08183 Stage V sporulation protein family D9C08_12550 PF00830 Ribosomal L28 family D9C08_12555 PF03780 Asp23 family, cell envelope-related function D9C08_12560 PF13684 Dihydroxyacetone kinase family D9C08_12560 PF02734 DAK2 domain D9C08_12565 PF03315 Serine dehydratase beta chain D9C08_12565 PF01842 ACT domain D9C08_12570 PF03313 Serine dehydratase alpha chain D9C08_12575 PF17191 RecG wedge domain D9C08_12575 PF00271 Helicase conserved C-terminal domain D9C08_12575 PF00270 DEAD/DEAH box helicase D9C08_12580 PF03061 Thioesterase superfamily D9C08_12585 PF02504 Fatty acid synthesis protein D9C08_12590 PF00698 Acyl transferase domain D9C08_12600 PF00550 Phosphopantetheine attachment site D9C08_12605 PF14622 Ribonuclease-III-like D9C08_12605 PF00035 Double-stranded RNA binding motif D9C08_12610 PF02463 RecF/RecN/SMC N terminal domain D9C08_12610 PF06470 SMC proteins Flexible Hinge Domain D9C08_12615 PF00448 SRP54-type protein, GTPase domain D9C08_12615 PF02881 SRP54-type protein, helical bundle domain D9C08_12620 PF02369 Bacterial Ig-like domain (group 1) D9C08_12625 PF04297 Putative helix-turn-helix protein, YlxM / p13 like D9C08_12630 PF00448 SRP54-type protein, GTPase domain D9C08_12630 PF02881 SRP54-type protein, helical bundle domain D9C08_12630 PF02978 Signal peptide binding domain D9C08_12635 PF00886 Ribosomal protein S16 D9C08_12645 PF11068 YlqD protein D9C08_12650 PF01782 RimM N-terminal domain D9C08_12650 PF05239 PRC-barrel domain D9C08_12655 PF01746 tRNA (Guanine-1)-methyltransferase D9C08_12660 PF01245 Ribosomal protein L19 D9C08_12665 PF01926 50S ribosome-binding GTPase D9C08_12670 PF01351 Ribonuclease HII D9C08_12680 PF01312 FlhB HrpN YscU SpaS Family D9C08_12685 PF00549 CoA-ligase D9C08_12685 PF08442 ATP-grasp domain D9C08_12690 PF02629 CoA binding domain D9C08_12690 PF00549 CoA-ligase D9C08_12695 PF02481 DNA recombination-mediator protein A D9C08_12700 PF01396 Topoisomerase DNA binding C4 zinc finger D9C08_12700 PF01751 Toprim domain D9C08_12700 PF01131 DNA topoisomerase D9C08_12705 PF01134 Glucose inhibited division protein A D9C08_12710 PF00589 Phage integrase family D9C08_12710 PF02899 Phage integrase, N-terminal SAM-like domain D9C08_12715 PF00227 Proteasome subunit D9C08_12720 PF07724 AAA domain (Cdc48 subfamily) D9C08_12720 PF00004 ATPase family associated with various cellular activities (AAA) D9C08_12720 PF10431 C-terminal, D2-small domain, of ClpB protein D9C08_12725 PF06018 CodY GAF-like domain D9C08_12725 PF08222 CodY helix-turn-helix domain D9C08_12730 PF00460 Flagella basal body rod protein D9C08_12735 PF06429 Flagellar basal body rod FlgEFG protein C-terminal D9C08_12735 PF00460 Flagella basal body rod protein D9C08_12740 PF02049 Flagellar hook-basal body complex protein FliE D9C08_12745 PF08345 Flagellar M-ring protein C-terminal D9C08_12745 PF01514 Secretory protein of YscJ/FliF family D9C08_12750 PF14842 FliG N-terminal domain D9C08_12750 PF14841 FliG middle domain D9C08_12750 PF01706 FliG C-terminal domain D9C08_12755 PF02108 Flagellar assembly protein FliH D9C08_12760 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain D9C08_12760 PF02874 ATP synthase alpha/beta family, beta-barrel domain D9C08_12760 PF18269 T3SS EscN ATPase C-terminal domain D9C08_12765 PF02050 Flagellar FliJ protein D9C08_12770 PF03448 MgtE intracellular N domain D9C08_12775 PF02120 Flagellar hook-length control protein FliK D9C08_12780 PF03963 Flagellar hook capping protein - N-terminal region D9C08_12785 PF06429 Flagellar basal body rod FlgEFG protein C-terminal D9C08_12785 PF00460 Flagella basal body rod protein D9C08_12790 PF06289 Flagellar and Swarming motility proteins D9C08_12795 PF03748 Flagellar basal body-associated protein FliL D9C08_12800 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term D9C08_12800 PF02154 Flagellar motor switch protein FliM D9C08_12805 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term D9C08_12805 PF04509 CheC-like family D9C08_12810 PF00072 Response regulator receiver domain D9C08_12815 PF04347 Flagellar biosynthesis protein, FliO D9C08_12820 PF00813 FliP family D9C08_12825 PF01313 Bacterial export proteins, family 3 D9C08_12830 PF01311 Bacterial export proteins, family 1 D9C08_12835 PF01312 FlhB HrpN YscU SpaS Family D9C08_12840 PF00771 FHIPEP family D9C08_12845 PF00448 SRP54-type protein, GTPase domain D9C08_12850 PF10609 NUBPL iron-transfer P-loop NTPase D9C08_12855 PF01339 CheB methylesterase D9C08_12855 PF00072 Response regulator receiver domain D9C08_12860 PF01627 Hpt domain D9C08_12860 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D9C08_12860 PF01584 CheW-like domain D9C08_12860 PF02895 Signal transducing histidine kinase, homodimeric domain D9C08_12860 PF07194 P2 response regulator binding domain D9C08_12865 PF01584 CheW-like domain D9C08_12870 PF04509 CheC-like family D9C08_12875 PF03975 CheD chemotactic sensory transduction D9C08_12880 PF04542 Sigma-70 region 2 D9C08_12880 PF04539 Sigma-70 region 3 D9C08_12880 PF04545 Sigma-70, region 4 D9C08_12890 PF00318 Ribosomal protein S2 D9C08_12895 PF00889 Elongation factor TS D9C08_12900 PF00696 Amino acid kinase family D9C08_12905 PF01765 Ribosome recycling factor D9C08_12910 PF01255 Putative undecaprenyl diphosphate synthase D9C08_12920 PF13288 DXP reductoisomerase C-terminal domain D9C08_12920 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain D9C08_12920 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase D9C08_12925 PF17820 PDZ domain D9C08_12925 PF02163 Peptidase family M50 D9C08_12930 PF03129 Anticodon binding domain D9C08_12930 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) D9C08_12930 PF04073 Aminoacyl-tRNA editing domain D9C08_12935 PF11490 DNA polymerase III polC-type N-terminus II D9C08_12935 PF14579 Helix-hairpin-helix motif D9C08_12935 PF14480 DNA polymerase III polC-type N-terminus I D9C08_12935 PF07733 Bacterial DNA polymerase III alpha NTPase domain D9C08_12935 PF00929 Exonuclease D9C08_12935 PF17657 Bacterial DNA polymerase III alpha subunit finger domain D9C08_12935 PF02811 PHP domain D9C08_12940 PF02576 RimP N-terminal domain D9C08_12940 PF17384 RimP C-terminal SH3 domain D9C08_12945 PF13184 NusA-like KH domain D9C08_12945 PF00575 S1 RNA binding domain D9C08_12945 PF08529 NusA N-terminal domain D9C08_12950 PF04296 Protein of unknown function (DUF448) D9C08_12955 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family D9C08_12960 PF00009 Elongation factor Tu GTP binding domain D9C08_12960 PF04760 Translation initiation factor IF-2, N-terminal region D9C08_12960 PF11987 Translation-initiation factor 2 D9C08_12965 PF04456 Protein of unknown function (DUF503) D9C08_12970 PF02033 Ribosome-binding factor A D9C08_12975 PF16198 tRNA pseudouridylate synthase B C-terminal domain D9C08_12975 PF01509 TruB family pseudouridylate synthase (N terminal domain) D9C08_12980 PF06574 FAD synthetase D9C08_12980 PF01687 Riboflavin kinase D9C08_12985 PF00312 Ribosomal protein S15 D9C08_12990 PF03725 3' exoribonuclease family, domain 2 D9C08_12990 PF01138 3' exoribonuclease family, domain 1 D9C08_12990 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain D9C08_12990 PF00575 S1 RNA binding domain D9C08_12990 PF00013 KH domain D9C08_12995 PF01522 Polysaccharide deacetylase D9C08_13000 PF00675 Insulinase (Peptidase family M16) D9C08_13000 PF05193 Peptidase M16 inactive domain D9C08_13005 PF05239 PRC-barrel domain D9C08_13010 PF16924 Dipicolinate synthase subunit A N-terminal domain D9C08_13010 PF01262 Alanine dehydrogenase/PNT, C-terminal domain D9C08_13015 PF02441 Flavoprotein D9C08_13020 PF02774 Semialdehyde dehydrogenase, dimerisation domain D9C08_13020 PF01118 Semialdehyde dehydrogenase, NAD binding domain D9C08_13025 PF13840 ACT domain D9C08_13025 PF00696 Amino acid kinase family D9C08_13030 PF00701 Dihydrodipicolinate synthetase family D9C08_13035 PF00753 Metallo-beta-lactamase superfamily D9C08_13035 PF17770 Ribonuclease J C-terminal domain D9C08_13035 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain D9C08_13040 PF00574 Clp protease D9C08_13045 PF14035 YlzJ-like protein D9C08_13050 PF17854 FtsK alpha domain D9C08_13050 PF09397 Ftsk gamma domain D9C08_13050 PF01580 FtsK/SpoIIIE family D9C08_13055 PF00392 Bacterial regulatory proteins, gntR family D9C08_13055 PF07702 UTRA domain D9C08_13060 PF07690 Major Facilitator Superfamily D9C08_13065 PF05193 Peptidase M16 inactive domain D9C08_13070 PF00675 Insulinase (Peptidase family M16) D9C08_13070 PF05193 Peptidase M16 inactive domain D9C08_13080 PF11588 Protein of unknown function (DUF3243) D9C08_13085 PF11868 Protein of unknown function (DUF3388) D9C08_13090 PF13464 Domain of unknown function (DUF4115) D9C08_13095 PF01066 CDP-alcohol phosphatidyltransferase D9C08_13100 PF00994 Probable molybdopterin binding domain D9C08_13100 PF18146 Damage-inducible protein CinA KH domain D9C08_13100 PF02464 Competence-damaged protein D9C08_13105 PF00154 recA bacterial DNA recombination protein D9C08_13110 PF00144 Beta-lactamase D9C08_13115 PF12072 Domain of unknown function (DUF3552) D9C08_13115 PF01966 HD domain D9C08_13115 PF00013 KH domain D9C08_13120 PF13277 YmdB-like protein D9C08_13125 PF04232 Stage V sporulation protein S (SpoVS) D9C08_13130 PF00107 Zinc-binding dehydrogenase D9C08_13130 PF08240 Alcohol dehydrogenase GroES-like domain D9C08_13135 PF00155 Aminotransferase class I and II D9C08_13145 PF01938 TRAM domain D9C08_13145 PF00919 Uncharacterized protein family UPF0004 D9C08_13145 PF04055 Radical SAM superfamily D9C08_13150 PF06133 Control of competence regulator ComK, YlbF/YmcA D9C08_13155 PF10628 Outer spore coat protein E (CotE) D9C08_13160 PF05192 MutS domain III D9C08_13160 PF05190 MutS family domain IV D9C08_13160 PF05188 MutS domain II D9C08_13160 PF00488 MutS domain V D9C08_13160 PF01624 MutS domain I D9C08_13165 PF01119 DNA mismatch repair protein, C-terminal domain D9C08_13165 PF08676 MutL C terminal dimerisation domain D9C08_13180 PF02368 Bacterial Ig-like domain (group 2) D9C08_13240 PF00872 Transposase, Mutator family D9C08_13250 PF14184 Regulatory protein YrvL D9C08_13260 PF13977 BetI-type transcriptional repressor, C-terminal D9C08_13260 PF00440 Bacterial regulatory proteins, tetR family D9C08_13275 PF00082 Subtilase family D9C08_13285 PF05908 Poly-gamma-glutamate hydrolase D9C08_13290 PF02566 OsmC-like protein D9C08_13295 PF00893 Small Multidrug Resistance protein D9C08_13300 PF00893 Small Multidrug Resistance protein D9C08_13310 PF12788 YmaF family D9C08_13320 PF17209 Hfq protein D9C08_13325 PF14157 YmzC-like protein D9C08_13335 PF07972 NrdI Flavodoxin like D9C08_13340 PF02867 Ribonucleotide reductase, barrel domain D9C08_13340 PF08343 Ribonucleotide reductase N-terminal D9C08_13340 PF00317 Ribonucleotide reductase, all-alpha domain D9C08_13345 PF00268 Ribonucleotide reductase, small chain D9C08_13355 PF01520 N-acetylmuramoyl-L-alanine amidase D9C08_13355 PF05036 Sporulation related domain D9C08_13365 PF00004 ATPase family associated with various cellular activities (AAA) D9C08_13365 PF17866 AAA lid domain D9C08_13370 PF13167 GTP-binding GTPase N-terminal D9C08_13370 PF16360 GTP-binding GTPase Middle Region D9C08_13370 PF01926 50S ribosome-binding GTPase D9C08_13375 PF06838 Methionine gamma-lyase D9C08_13380 PF13411 MerR HTH family regulatory protein D9C08_13385 PF03951 Glutamine synthetase, beta-Grasp domain D9C08_13385 PF00120 Glutamine synthetase, catalytic domain D9C08_13395 PF18593 CdiI immunity protein D9C08_13405 PF14411 A nuclease of the HNH/ENDO VII superfamily with conserved LHH D9C08_13405 PF04740 LXG domain of WXG superfamily D9C08_13450 PF00872 Transposase, Mutator family D9C08_13460 PF13302 Acetyltransferase (GNAT) domain D9C08_13475 PF13443 Cro/C1-type HTH DNA-binding domain D9C08_13510 PF04616 Glycosyl hydrolases family 43 D9C08_13510 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain D9C08_13515 PF00480 ROK family D9C08_13520 PF01261 Xylose isomerase-like TIM barrel D9C08_13525 PF00370 FGGY family of carbohydrate kinases, N-terminal domain D9C08_13525 PF02782 FGGY family of carbohydrate kinases, C-terminal domain D9C08_13540 PF00872 Transposase, Mutator family D9C08_13545 PF00565 Staphylococcal nuclease homologue D9C08_13550 PF00083 Sugar (and other) transporter D9C08_13555 PF01168 Alanine racemase, N-terminal domain D9C08_13555 PF00842 Alanine racemase, C-terminal domain D9C08_13570 PF00692 dUTPase D9C08_13590 PF00303 Thymidylate synthase D9C08_13600 PF15493 Domain of unknown function, YrpD D9C08_13605 PF14037 YoqO-like protein D9C08_13615 PF02416 mttA/Hcf106 family D9C08_13625 PF08327 Activator of Hsp90 ATPase homolog 1-like protein D9C08_13655 PF13761 Domain of unknown function (DUF4166) D9C08_13660 PF14158 YndJ-like protein D9C08_13670 PF05908 Poly-gamma-glutamate hydrolase D9C08_13675 PF10710 Protein of unknown function (DUF2512) D9C08_13680 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily D9C08_13690 PF01726 LexA DNA binding domain D9C08_13690 PF00717 Peptidase S24-like D9C08_13695 PF01476 LysM domain D9C08_13700 PF00239 Resolvase, N terminal domain D9C08_13705 PF05979 Bacterial protein of unknown function (DUF896) D9C08_13710 PF02780 Transketolase, C-terminal domain D9C08_13710 PF00456 Transketolase, thiamine diphosphate binding domain D9C08_13710 PF02779 Transketolase, pyrimidine binding domain D9C08_13715 PF10747 Sporulation inhibitor of replication protein SirA D9C08_13720 PF03672 Uncharacterised protein family (UPF0154) D9C08_13725 PF09388 Spo0E like sporulation regulatory protein D9C08_13730 PF02683 Cytochrome C biogenesis protein transmembrane region D9C08_13735 PF00072 Response regulator receiver domain D9C08_13740 PF07301 Protein of unknown function (DUF1453) D9C08_13750 PF11084 Protein of unknown function (DUF2621) D9C08_13760 PF08179 Small acid-soluble spore protein P family D9C08_13770 PF00330 Aconitase family (aconitate hydratase) D9C08_13770 PF00694 Aconitase C-terminal domain D9C08_13775 PF00578 AhpC/TSA family D9C08_13780 PF13040 Fur-regulated basic protein B D9C08_13785 PF08177 Small acid-soluble spore protein N family D9C08_13795 PF03061 Thioesterase superfamily D9C08_13805 PF01521 Iron-sulphur cluster biosynthesis D9C08_13810 PF02660 Glycerol-3-phosphate acyltransferase D9C08_13815 PF13380 CoA binding domain D9C08_13820 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D9C08_13820 PF01751 Toprim domain D9C08_13820 PF00204 DNA gyrase B D9C08_13820 PF00986 DNA gyrase B subunit, carboxyl terminus D9C08_13825 PF00521 DNA gyrase/topoisomerase IV, subunit A D9C08_13825 PF03989 DNA gyrase C-terminal domain, beta-propeller D9C08_13835 PF01235 Sodium:alanine symporter family D9C08_13840 PF00150 Cellulase (glycosyl hydrolase family 5) D9C08_13840 PF00942 Cellulose binding domain D9C08_13845 PF17452 Uncharacterized YnfE-like D9C08_13860 PF04138 GtrA-like protein D9C08_13865 PF00483 Nucleotidyl transferase D9C08_13870 PF09335 SNARE associated Golgi protein D9C08_13880 PF01039 Carboxyl transferase domain D9C08_13885 PF00378 Enoyl-CoA hydratase/isomerase D9C08_13890 PF00682 HMGL-like D9C08_13895 PF00364 Biotin-requiring enzyme D9C08_13900 PF00289 Biotin carboxylase, N-terminal domain D9C08_13900 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain D9C08_13900 PF02785 Biotin carboxylase C-terminal domain D9C08_13905 PF00501 AMP-binding enzyme D9C08_13905 PF13193 AMP-binding enzyme C-terminal domain D9C08_13910 PF02771 Acyl-CoA dehydrogenase, N-terminal domain D9C08_13910 PF00441 Acyl-CoA dehydrogenase, C-terminal domain D9C08_13910 PF02770 Acyl-CoA dehydrogenase, middle domain D9C08_13915 PF17329 Family of unknown function (DUF5367) D9C08_13930 PF02638 Glycosyl hydrolase-like 10 D9C08_13935 PF07098 Protein of unknown function (DUF1360) D9C08_13945 PF00668 Condensation domain D9C08_13945 PF13193 AMP-binding enzyme C-terminal domain D9C08_13945 PF00501 AMP-binding enzyme D9C08_13945 PF00550 Phosphopantetheine attachment site D9C08_13950 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family D9C08_13955 PF01263 Aldose 1-epimerase D9C08_13960 PF01554 MatE D9C08_13965 PF16800 IseA DL-endopeptidase inhibitor D9C08_13975 PF00589 Phage integrase family D9C08_13980 PF12728 Helix-turn-helix domain D9C08_13990 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D9C08_13990 PF03466 LysR substrate binding domain D9C08_13995 PF00107 Zinc-binding dehydrogenase D9C08_13995 PF08240 Alcohol dehydrogenase GroES-like domain D9C08_14000 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster D9C08_14000 PF07992 Pyridine nucleotide-disulphide oxidoreductase D9C08_14005 PF04898 Glutamate synthase central domain D9C08_14005 PF01493 GXGXG motif D9C08_14005 PF00310 Glutamine amidotransferases class-II D9C08_14005 PF01645 Conserved region in glutamate synthase D9C08_14010 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D9C08_14010 PF03466 LysR substrate binding domain D9C08_14035 PF02334 Replication terminator protein D9C08_14040 PF00106 short chain dehydrogenase D9C08_14045 PF06103 Bacterial protein of unknown function (DUF948) D9C08_14055 PF13302 Acetyltransferase (GNAT) domain D9C08_14070 PF00005 ABC transporter D9C08_14080 PF07690 Major Facilitator Superfamily D9C08_14090 PF04239 Protein of unknown function (DUF421) D9C08_14095 PF13396 Phospholipase_D-nuclease N-terminal D9C08_14095 PF13091 PLD-like domain D9C08_14105 PF04239 Protein of unknown function (DUF421) D9C08_14115 PF03862 SpoVAC/SpoVAEB sporulation membrane protein D9C08_14120 PF07451 Stage V sporulation protein AD (SpoVAD) D9C08_14125 PF03862 SpoVAC/SpoVAEB sporulation membrane protein D9C08_14140 PF05067 Manganese containing catalase D9C08_14150 PF03323 Bacillus/Clostridium GerA spore germination protein D9C08_14155 PF05036 Sporulation related domain D9C08_14155 PF01520 N-acetylmuramoyl-L-alanine amidase D9C08_14165 PF13700 Domain of unknown function (DUF4158) D9C08_14165 PF01526 Tn3 transposase DDE domain D9C08_14170 PF13700 Domain of unknown function (DUF4158) D9C08_14170 PF01526 Tn3 transposase DDE domain D9C08_14175 PF01609 Transposase DDE domain D9C08_14180 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain D9C08_14180 PF05227 CHASE3 domain D9C08_14180 PF00672 HAMP domain D9C08_14185 PF03241 4-hydroxyphenylacetate 3-hydroxylase C terminal D9C08_14185 PF11794 4-hydroxyphenylacetate 3-hydroxylase N terminal D9C08_14190 PF03330 Lytic transglycolase D9C08_14195 PF06912 Protein of unknown function (DUF1275) D9C08_14215 PF00190 Cupin D9C08_14245 PF04294 VanW like protein D9C08_14250 PF11188 Protein of unknown function (DUF2975) D9C08_14255 PF13443 Cro/C1-type HTH DNA-binding domain D9C08_14260 PF05675 Protein of unknown function (DUF817) D9C08_14265 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D9C08_14265 PF03466 LysR substrate binding domain D9C08_14270 PF00892 EamA-like transporter family D9C08_14280 PF01965 DJ-1/PfpI family D9C08_14295 PF01609 Transposase DDE domain D9C08_14300 PF11518 Protein of unknown function (DUF3221) D9C08_14315 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain D9C08_14315 PF00391 PEP-utilising enzyme, mobile domain D9C08_14320 PF00457 Glycosyl hydrolases family 11 D9C08_14330 PF05154 TM2 domain D9C08_14335 PF01381 Helix-turn-helix D9C08_14370 PF00665 Integrase core domain D9C08_14375 PF01695 IstB-like ATP binding protein D9C08_14385 PF00144 Beta-lactamase D9C08_14395 PF17094 Uncharacterised protein family (UPF0715) D9C08_14415 PF13443 Cro/C1-type HTH DNA-binding domain D9C08_14425 PF17094 Uncharacterised protein family (UPF0715) D9C08_14445 PF00872 Transposase, Mutator family D9C08_14455 PF14037 YoqO-like protein D9C08_14465 PF18801 response regulator aspartate phosphatase H, N terminal D9C08_14470 PF13302 Acetyltransferase (GNAT) domain D9C08_14480 PF00899 ThiF family D9C08_14485 PF01209 ubiE/COQ5 methyltransferase family D9C08_14490 PF07690 Major Facilitator Superfamily D9C08_14495 PF00872 Transposase, Mutator family D9C08_14525 PF13302 Acetyltransferase (GNAT) domain D9C08_14545 PF04740 LXG domain of WXG superfamily D9C08_14545 PF14411 A nuclease of the HNH/ENDO VII superfamily with conserved LHH D9C08_14550 PF09346 SMI1 / KNR4 family (SUKH-1) D9C08_14555 PF01593 Flavin containing amine oxidoreductase D9C08_14560 PF01588 Putative tRNA binding domain D9C08_14565 PF12833 Helix-turn-helix domain D9C08_14565 PF07883 Cupin domain D9C08_14570 PF00583 Acetyltransferase (GNAT) family D9C08_14575 PF13305 Tetracyclin repressor-like, C-terminal domain D9C08_14575 PF00440 Bacterial regulatory proteins, tetR family D9C08_14580 PF00753 Metallo-beta-lactamase superfamily D9C08_14585 PF06445 GyrI-like small molecule binding domain D9C08_14590 PF08279 HTH domain D9C08_14590 PF13280 WYL domain D9C08_14600 PF01022 Bacterial regulatory protein, arsR family D9C08_14620 PF04238 Protein of unknown function (DUF420) D9C08_14625 PF18846 Bacterial archaeo-eukaryotic release factor family 5 D9C08_14635 PF17676 LD-carboxypeptidase C-terminal domain D9C08_14635 PF02016 LD-carboxypeptidase N-terminal domain D9C08_14640 PF00487 Fatty acid desaturase D9C08_14645 PF07730 Histidine kinase D9C08_14650 PF00072 Response regulator receiver domain D9C08_14650 PF00196 Bacterial regulatory proteins, luxR family D9C08_14655 PF01476 LysM domain D9C08_14655 PF06725 3D domain D9C08_14660 PF00270 DEAD/DEAH box helicase D9C08_14660 PF00570 HRDC domain D9C08_14660 PF16124 RecQ zinc-binding D9C08_14660 PF09382 RQC domain D9C08_14660 PF00271 Helicase conserved C-terminal domain D9C08_14675 PF02525 Flavodoxin-like fold D9C08_14680 PF01258 Prokaryotic dksA/traR C4-type zinc finger D9C08_14695 PF00011 Hsp20/alpha crystallin family D9C08_14710 PF08000 Bacterial PH domain D9C08_14720 PF00171 Aldehyde dehydrogenase family D9C08_14725 PF13249 Squalene-hopene cyclase N-terminal domain D9C08_14725 PF13243 Squalene-hopene cyclase C-terminal domain D9C08_14730 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain D9C08_14730 PF02777 Iron/manganese superoxide dismutases, C-terminal domain D9C08_14735 PF00209 Sodium:neurotransmitter symporter family D9C08_14740 PF01758 Sodium Bile acid symporter family D9C08_14745 PF02817 e3 binding domain D9C08_14745 PF00364 Biotin-requiring enzyme D9C08_14745 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) D9C08_14750 PF16870 2-oxoglutarate dehydrogenase C-terminal D9C08_14750 PF02779 Transketolase, pyrimidine binding domain D9C08_14750 PF00676 Dehydrogenase E1 component D9C08_14755 PF00092 von Willebrand factor type A domain D9C08_14760 PF07728 AAA domain (dynein-related subfamily) D9C08_14765 PF00080 Copper/zinc superoxide dismutase (SODC) D9C08_14765 PF13627 Prokaryotic lipoprotein-attachment site D9C08_14770 PF01476 LysM domain D9C08_14770 PF00877 NlpC/P60 family D9C08_14775 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase D9C08_14780 PF10372 Bacterial membrane-spanning protein N-terminus D9C08_14780 PF02457 DisA bacterial checkpoint controller nucleotide-binding D9C08_14785 PF01554 MatE D9C08_14790 PF01740 STAS domain D9C08_14800 PF02585 GlcNAc-PI de-N-acetylase D9C08_14805 PF08830 Protein of unknown function (DUF1806) D9C08_14815 PF00892 EamA-like transporter family D9C08_14830 PF02447 GntP family permease D9C08_14835 PF14552 Tautomerase enzyme D9C08_14840 PF01638 HxlR-like helix-turn-helix D9C08_14845 PF00881 Nitroreductase family D9C08_14850 PF01738 Dienelactone hydrolase family D9C08_14855 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily D9C08_14860 PF11755 Protein of unknown function (DUF3311) D9C08_14865 PF00474 Sodium:solute symporter family D9C08_14870 PF17820 PDZ domain D9C08_14870 PF01471 Putative peptidoglycan binding domain D9C08_14870 PF03572 Peptidase family S41 D9C08_14875 PF08241 Methyltransferase domain D9C08_14885 PF02557 D-alanyl-D-alanine carboxypeptidase D9C08_14890 PF01048 Phosphorylase superfamily D9C08_14900 PF14191 YodL-like D9C08_14905 PF01569 PAP2 superfamily D9C08_14910 PF14162 YozD-like protein D9C08_14930 PF06855 YozE SAM-like fold D9C08_14935 PF14122 YokU-like protein, putative antitoxin D9C08_14940 PF12544 Lysine-2,3-aminomutase D9C08_14945 PF00583 Acetyltransferase (GNAT) family D9C08_14950 PF07687 Peptidase dimerisation domain D9C08_14950 PF01546 Peptidase family M20/M25/M40 D9C08_14960 PF01144 Coenzyme A transferase D9C08_14965 PF00202 Aminotransferase class-III D9C08_14980 PF00583 Acetyltransferase (GNAT) family D9C08_14985 PF00535 Glycosyl transferase family 2 D9C08_15000 PF12996 DUF based on E. rectale Gene description (DUF3880) D9C08_15005 PF02333 Phytase D9C08_15010 PF02719 Polysaccharide biosynthesis protein D9C08_15015 PF01641 SelR domain D9C08_15020 PF01625 Peptide methionine sulfoxide reductase D9C08_15025 PF01047 MarR family D9C08_15030 PF01554 MatE D9C08_15035 PF17431 Uncharacterized YmpT-like D9C08_15040 PF09911 Uncharacterized protein conserved in bacteria (DUF2140) D9C08_15045 PF13472 GDSL-like Lipase/Acylhydrolase family D9C08_15050 PF02630 SCO1/SenC D9C08_15055 PF10751 Protein of unknown function (DUF2535) D9C08_15060 PF00291 Pyridoxal-phosphate dependent enzyme D9C08_15060 PF00585 C-terminal regulatory domain of Threonine dehydratase D9C08_15065 PF00158 Sigma-54 interaction domain D9C08_15065 PF08461 Ribonuclease R winged-helix domain D9C08_15070 PF03006 Haemolysin-III related D9C08_15080 PF00186 Dihydrofolate reductase D9C08_15085 PF04608 Phosphatidylglycerophosphatase A D9C08_15090 PF14005 YpjP-like protein D9C08_15095 PF04445 Putative SAM-dependent methyltransferase D9C08_15100 PF06491 Disulphide isomerase D9C08_15105 PF00920 Dehydratase family D9C08_15110 PF08712 Scaffold protein Nfu/NifU N terminal D9C08_15110 PF13769 Virulence factor D9C08_15115 PF01966 HD domain D9C08_15120 PF00255 Glutathione peroxidase D9C08_15125 PF04204 Homoserine O-succinyltransferase D9C08_15130 PF06925 Monogalactosyldiacylglycerol (MGDG) synthase D9C08_15130 PF00534 Glycosyl transferases group 1 D9C08_15140 PF00313 'Cold-shock' DNA-binding domain D9C08_15150 PF10819 Protein of unknown function (DUF2564) D9C08_15155 PF10782 Zinc-finger D9C08_15160 PF13456 Reverse transcriptase-like D9C08_15165 PF02592 Putative vitamin uptake transporter D9C08_15170 PF13456 Reverse transcriptase-like D9C08_15180 PF01367 5'-3' exonuclease, C-terminal SAM fold D9C08_15180 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain D9C08_15190 PF10752 Protein of unknown function (DUF2533) D9C08_15195 PF00350 Dynamin family D9C08_15205 PF04140 Isoprenylcysteine carboxyl methyltransferase (ICMT) family D9C08_15215 PF00860 Permease family D9C08_15220 PF00156 Phosphoribosyl transferase domain D9C08_15225 PF02074 Carboxypeptidase Taq (M32) metallopeptidase D9C08_15230 PF03812 2-keto-3-deoxygluconate permease D9C08_15235 PF01081 KDPG and KHG aldolase D9C08_15240 PF00294 pfkB family carbohydrate kinase D9C08_15245 PF00356 Bacterial regulatory proteins, lacI family D9C08_15250 PF04962 KduI/IolB family D9C08_15260 PF13307 Helicase C-terminal domain D9C08_15270 PF14139 YpzG-like protein D9C08_15275 PF01170 Putative RNA methylase family UPF0020 D9C08_15275 PF02926 THUMP domain D9C08_15285 PF05103 DivIVA protein D9C08_15290 PF06908 YspA SLOG family D9C08_15295 PF11122 Inner spore coat protein D D9C08_15305 PF13482 RNase_H superfamily D9C08_15310 PF00271 Helicase conserved C-terminal domain D9C08_15310 PF09369 Domain of unknown function (DUF1998) D9C08_15310 PF00270 DEAD/DEAH box helicase D9C08_15315 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 D9C08_15325 PF14179 YppG-like protein D9C08_15330 PF14178 YppF-like protein D9C08_15335 PF08807 Bacterial domain of unknown function (DUF1798) D9C08_15340 PF17522 Family of unknown function (DUF5446) D9C08_15350 PF10720 Protein of unknown function (DUF2515) D9C08_15355 PF03838 Recombination protein U D9C08_15360 PF00905 Penicillin binding protein transpeptidase domain D9C08_15360 PF00912 Transglycosylase D9C08_15370 PF00730 HhH-GPD superfamily base excision DNA repair protein D9C08_15370 PF00633 Helix-hairpin-helix motif D9C08_15370 PF10576 Iron-sulfur binding domain of endonuclease III D9C08_15375 PF07261 Replication initiation and membrane attachment D9C08_15380 PF01336 OB-fold nucleic acid binding domain D9C08_15380 PF00152 tRNA synthetases class II (D, K and N) D9C08_15385 PF00155 Aminotransferase class I and II D9C08_15390 PF03413 Peptidase propeptide and YPEB domain D9C08_15390 PF17881 Domain of unknown function (DUF5590) D9C08_15395 PF14084 Protein of unknown function (DUF4264) D9C08_15400 PF00929 Exonuclease D9C08_15400 PF04851 Type III restriction enzyme, res subunit D9C08_15400 PF13307 Helicase C-terminal domain D9C08_15405 PF02261 Aspartate decarboxylase D9C08_15410 PF02569 Pantoate-beta-alanine ligase D9C08_15415 PF02548 Ketopantoate hydroxymethyltransferase D9C08_15420 PF08279 HTH domain D9C08_15420 PF03099 Biotin/lipoate A/B protein ligase family D9C08_15420 PF02237 Biotin protein ligase C terminal domain D9C08_15425 PF01743 Poly A polymerase head domain D9C08_15425 PF12627 Probable RNA and SrmB- binding site of polymerase A D9C08_15425 PF13735 tRNA nucleotidyltransferase domain 2 putative D9C08_15430 PF00534 Glycosyl transferases group 1 D9C08_15430 PF13439 Glycosyltransferase Family 4 D9C08_15435 PF02585 GlcNAc-PI de-N-acetylase D9C08_15440 PF02142 MGS-like domain D9C08_15445 PF05173 Dihydrodipicolinate reductase, C-terminus D9C08_15445 PF01113 Dihydrodipicolinate reductase, N-terminus D9C08_15450 PF03819 MazG nucleotide pyrophosphohydrolase domain D9C08_15455 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) D9C08_15455 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 D9C08_15460 PF09577 Sporulation protein YpjB (SpoYpjB) D9C08_15465 PF07187 Protein of unknown function (DUF1405) D9C08_15470 PF13442 Cytochrome C oxidase, cbb3-type, subunit III D9C08_15470 PF00032 Cytochrome b(C-terminal)/b6/petD D9C08_15475 PF00033 Cytochrome b/b6/petB D9C08_15480 PF00355 Rieske [2Fe-2S] domain D9C08_15485 PF10673 Protein of unknown function (DUF2487) D9C08_15490 PF08858 IDEAL domain D9C08_15490 PF08864 UPF0302 domain D9C08_15500 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) D9C08_15505 PF01842 ACT domain D9C08_15505 PF02153 Prephenate dehydrogenase D9C08_15510 PF00155 Aminotransferase class I and II D9C08_15515 PF00290 Tryptophan synthase alpha chain D9C08_15520 PF00291 Pyridoxal-phosphate dependent enzyme D9C08_15525 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase D9C08_15530 PF00218 Indole-3-glycerol phosphate synthase D9C08_15535 PF02885 Glycosyl transferase family, helical bundle domain D9C08_15535 PF00591 Glycosyl transferase family, a/b domain D9C08_15540 PF04715 Anthranilate synthase component I, N terminal region D9C08_15540 PF00425 chorismate binding enzyme D9C08_15545 PF07736 Chorismate mutase type I D9C08_15550 PF01761 3-dehydroquinate synthase D9C08_15555 PF01264 Chorismate synthase D9C08_15560 PF01739 CheR methyltransferase, SAM binding domain D9C08_15560 PF03705 CheR methyltransferase, all-alpha domain D9C08_15565 PF00334 Nucleoside diphosphate kinase D9C08_15570 PF00348 Polyprenyl synthetase D9C08_15575 PF01209 ubiE/COQ5 methyltransferase family D9C08_15580 PF07307 Heptaprenyl diphosphate synthase (HEPPP synthase) subunit 1 D9C08_15585 PF02081 Tryptophan RNA-binding attenuator protein D9C08_15590 PF01227 GTP cyclohydrolase I D9C08_15605 PF00216 Bacterial DNA-binding protein D9C08_15610 PF09547 Stage IV sporulation protein A (spore_IV_A) D9C08_15620 PF10966 Protein of unknown function (DUF2768) D9C08_15625 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus D9C08_15625 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus D9C08_15630 PF01926 50S ribosome-binding GTPase D9C08_15630 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal D9C08_15640 PF14045 YIEGIA protein D9C08_15650 PF14140 YpzI-like protein D9C08_15660 PF01070 FMN-dependent dehydrogenase D9C08_15665 PF00575 S1 RNA binding domain D9C08_15670 PF02224 Cytidylate kinase D9C08_15675 PF17313 Family of unknown function (DUF5359) D9C08_15680 PF07238 PilZ domain D9C08_15680 PF12945 Flagellar protein YcgR D9C08_15685 PF14620 YpeB sporulation D9C08_15685 PF03413 Peptidase propeptide and YPEB domain D9C08_15690 PF01471 Putative peptidoglycan binding domain D9C08_15690 PF07486 Cell Wall Hydrolase D9C08_15695 PF13367 PrsW family intramembrane metalloprotease D9C08_15705 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain D9C08_15705 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase D9C08_15710 PF05389 Negative regulator of genetic competence (MecA) D9C08_15715 PF00149 Calcineurin-like phosphoesterase D9C08_15720 PF10864 Protein of unknown function (DUF2663) D9C08_15725 PF01476 LysM domain D9C08_15730 PF02517 CPBP intramembrane metalloprotease D9C08_15735 PF00271 Helicase conserved C-terminal domain D9C08_15735 PF00270 DEAD/DEAH box helicase D9C08_15740 PF14493 Helix-turn-helix domain D9C08_15750 PF12822 ECF transporter, substrate-specific component D9C08_15755 PF01842 ACT domain D9C08_15755 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain D9C08_15755 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain D9C08_15760 PF01487 Type I 3-dehydroquinase D9C08_15770 PF04542 Sigma-70 region 2 D9C08_15770 PF08281 Sigma-70, region 4 D9C08_15775 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D9C08_15775 PF00672 HAMP domain D9C08_15775 PF00989 PAS fold D9C08_15775 PF18698 Histidine kinase sensor domain D9C08_15775 PF00512 His Kinase A (phospho-acceptor) domain D9C08_15780 PF00072 Response regulator receiver domain D9C08_15780 PF00486 Transcriptional regulatory protein, C terminal D9C08_15785 PF01578 Cytochrome C assembly protein D9C08_15790 PF05140 ResB-like family D9C08_15795 PF00578 AhpC/TSA family D9C08_15800 PF01479 S4 domain D9C08_15800 PF00849 RNA pseudouridylate synthase D9C08_15805 PF07670 Nucleoside recognition D9C08_15810 PF07670 Nucleoside recognition D9C08_15815 PF00768 D-alanyl-D-alanine carboxypeptidase D9C08_15815 PF07943 Penicillin-binding protein 5, C-terminal domain D9C08_15820 PF13047 Protein of unknown function (DUF3907) D9C08_15825 PF04079 Segregation and condensation complex subunit ScpB D9C08_15830 PF02616 Segregation and condensation protein ScpA D9C08_15835 PF03745 Domain of unknown function (DUF309) D9C08_15840 PF00583 Acetyltransferase (GNAT) family D9C08_15845 PF00885 6,7-dimethyl-8-ribityllumazine synthase D9C08_15850 PF00925 GTP cyclohydrolase II D9C08_15850 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase D9C08_15855 PF00677 Lumazine binding domain D9C08_15860 PF01872 RibD C-terminal domain D9C08_15860 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region D9C08_15870 PF10502 Signal peptidase, peptidase S26 D9C08_15880 PF09855 Nucleic-acid-binding protein containing Zn-ribbon domain (DUF2082) D9C08_15885 PF10676 Spore germination protein gerPA/gerPF D9C08_15930 PF00872 Transposase, Mutator family D9C08_15940 PF02810 SEC-C motif D9C08_15950 PF18801 response regulator aspartate phosphatase H, N terminal D9C08_15960 PF00872 Transposase, Mutator family D9C08_16015 PF01609 Transposase DDE domain D9C08_16020 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD D9C08_16035 PF06207 Protein of unknown function (DUF1002) D9C08_16040 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain D9C08_16040 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain D9C08_16045 PF03323 Bacillus/Clostridium GerA spore germination protein D9C08_16050 PF14097 Stage V sporulation protein AE1 D9C08_16055 PF03862 SpoVAC/SpoVAEB sporulation membrane protein D9C08_16060 PF07451 Stage V sporulation protein AD (SpoVAD) D9C08_16065 PF03862 SpoVAC/SpoVAEB sporulation membrane protein D9C08_16070 PF13782 Stage V sporulation protein AB D9C08_16075 PF12164 Stage V sporulation protein AA D9C08_16080 PF04545 Sigma-70, region 4 D9C08_16080 PF04539 Sigma-70 region 3 D9C08_16080 PF04542 Sigma-70 region 2 D9C08_16085 PF13581 Histidine kinase-like ATPase domain D9C08_16090 PF01740 STAS domain D9C08_16095 PF07943 Penicillin-binding protein 5, C-terminal domain D9C08_16095 PF00768 D-alanyl-D-alanine carboxypeptidase D9C08_16100 PF01048 Phosphorylase superfamily D9C08_16105 PF01676 Metalloenzyme superfamily D9C08_16110 PF02899 Phage integrase, N-terminal SAM-like domain D9C08_16110 PF00589 Phage integrase family D9C08_16115 PF14004 Protein of unknown function (DUF4227) D9C08_16120 PF01475 Ferric uptake regulator family D9C08_16125 PF01944 Stage II sporulation protein M D9C08_16135 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain D9C08_16135 PF00390 Malic enzyme, N-terminal domain D9C08_16135 PF03949 Malic enzyme, NAD binding domain D9C08_16140 PF03553 Na+/H+ antiporter family D9C08_16145 PF00206 Lyase D9C08_16145 PF10415 Fumarase C C-terminus D9C08_16150 PF17763 Glutaminase/Asparaginase C-terminal domain D9C08_16150 PF00710 Asparaginase, N-terminal D9C08_16155 PF01381 Helix-turn-helix D9C08_16165 PF00293 NUDIX domain D9C08_16170 PF13072 Mother cell inhibitor of FtsZ D9C08_16175 PF00248 Aldo/keto reductase family D9C08_16180 PF13025 Protein of unknown function (DUF3886) D9C08_16185 PF12146 Serine aminopeptidase, S33 D9C08_16190 PF10827 Protein of unknown function (DUF2552) D9C08_16195 PF01521 Iron-sulphur cluster biosynthesis D9C08_16200 PF13673 Acetyltransferase (GNAT) domain D9C08_16200 PF04229 GrpB protein D9C08_16205 PF03992 Antibiotic biosynthesis monooxygenase D9C08_16210 PF00583 Acetyltransferase (GNAT) family D9C08_16215 PF08863 YolD-like protein D9C08_16220 PF11799 impB/mucB/samB family C-terminal domain D9C08_16220 PF00817 impB/mucB/samB family D9C08_16225 PF14164 YqzH-like protein D9C08_16230 PF07690 Major Facilitator Superfamily D9C08_16240 PF00485 Phosphoribulokinase / Uridine kinase family D9C08_16245 PF00291 Pyridoxal-phosphate dependent enzyme D9C08_16250 PF00106 short chain dehydrogenase D9C08_16255 PF00753 Metallo-beta-lactamase superfamily D9C08_16260 PF03807 NADP oxidoreductase coenzyme F420-dependent D9C08_16260 PF14748 Pyrroline-5-carboxylate reductase dimerisation D9C08_16275 PF01546 Peptidase family M20/M25/M40 D9C08_16280 PF00724 NADH:flavin oxidoreductase / NADH oxidase family D9C08_16285 PF12146 Serine aminopeptidase, S33 D9C08_16290 PF00471 Ribosomal protein L33 D9C08_16295 PF12706 Beta-lactamase superfamily domain D9C08_16300 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain D9C08_16300 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain D9C08_16305 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain D9C08_16305 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase D9C08_16310 PF11799 impB/mucB/samB family C-terminal domain D9C08_16310 PF00817 impB/mucB/samB family D9C08_16310 PF11798 IMS family HHH motif D9C08_16320 PF02096 60Kd inner membrane protein D9C08_16325 PF09844 Uncharacterized conserved protein (COG2071) D9C08_16330 PF07687 Peptidase dimerisation domain D9C08_16330 PF01546 Peptidase family M20/M25/M40 D9C08_16335 PF01039 Carboxyl transferase domain D9C08_16345 PF03734 L,D-transpeptidase catalytic domain D9C08_16350 PF11728 Putative aromatic acid exporter C-terminal domain D9C08_16350 PF06081 Aromatic acid exporter family member 1 D9C08_16355 PF00005 ABC transporter D9C08_16360 PF00528 Binding-protein-dependent transport system inner membrane component D9C08_16365 PF00497 Bacterial extracellular solute-binding proteins, family 3 D9C08_16370 PF06491 Disulphide isomerase D9C08_16375 PF00781 Diacylglycerol kinase catalytic domain D9C08_16380 PF07690 Major Facilitator Superfamily D9C08_16385 PF06445 GyrI-like small molecule binding domain D9C08_16385 PF13411 MerR HTH family regulatory protein D9C08_16390 PF02817 e3 binding domain D9C08_16390 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) D9C08_16390 PF00364 Biotin-requiring enzyme D9C08_16395 PF02779 Transketolase, pyrimidine binding domain D9C08_16395 PF02780 Transketolase, C-terminal domain D9C08_16400 PF00676 Dehydrogenase E1 component D9C08_16405 PF07992 Pyridine nucleotide-disulphide oxidoreductase D9C08_16405 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain D9C08_16410 PF00871 Acetokinase family D9C08_16415 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase D9C08_16415 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain D9C08_16420 PF01515 Phosphate acetyl/butaryl transferase D9C08_16425 PF02954 Bacterial regulatory protein, Fis family D9C08_16425 PF00989 PAS fold D9C08_16425 PF00158 Sigma-54 interaction domain D9C08_16430 PF11118 Protein of unknown function (DUF2627) D9C08_16440 PF03972 MmgE/PrpD family D9C08_16445 PF00285 Citrate synthase, C-terminal domain D9C08_16450 PF00441 Acyl-CoA dehydrogenase, C-terminal domain D9C08_16450 PF02770 Acyl-CoA dehydrogenase, middle domain D9C08_16450 PF02771 Acyl-CoA dehydrogenase, N-terminal domain D9C08_16455 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain D9C08_16455 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain D9C08_16460 PF02803 Thiolase, C-terminal domain D9C08_16460 PF00108 Thiolase, N-terminal domain D9C08_16465 PF03009 Glycerophosphoryl diester phosphodiesterase family D9C08_16470 PF01520 N-acetylmuramoyl-L-alanine amidase D9C08_16485 PF00724 NADH:flavin oxidoreductase / NADH oxidase family D9C08_16490 PF08769 Sporulation initiation factor Spo0A C terminal D9C08_16490 PF00072 Response regulator receiver domain D9C08_16500 PF17820 PDZ domain D9C08_16500 PF05580 SpoIVB peptidase S55 D9C08_16505 PF13476 AAA domain D9C08_16510 PF01316 Arginine repressor, DNA binding domain D9C08_16510 PF02863 Arginine repressor, C-terminal domain D9C08_16515 PF01479 S4 domain D9C08_16515 PF01728 FtsJ-like methyltransferase D9C08_16520 PF13292 1-deoxy-D-xylulose-5-phosphate synthase D9C08_16520 PF02779 Transketolase, pyrimidine binding domain D9C08_16520 PF02780 Transketolase, C-terminal domain D9C08_16525 PF00348 Polyprenyl synthetase D9C08_16530 PF02609 Exonuclease VII small subunit D9C08_16535 PF13742 OB-fold nucleic acid binding domain D9C08_16535 PF02601 Exonuclease VII, large subunit D9C08_16540 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain D9C08_16540 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain D9C08_16545 PF01029 NusB family D9C08_16550 PF03780 Asp23 family, cell envelope-related function D9C08_16555 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain D9C08_16555 PF00289 Biotin carboxylase, N-terminal domain D9C08_16555 PF02785 Biotin carboxylase C-terminal domain D9C08_16560 PF00364 Biotin-requiring enzyme D9C08_16575 PF12685 SpoIIIAH-like protein D9C08_16585 PF09581 Stage III sporulation protein AF (Spore_III_AF) D9C08_16590 PF09546 Stage III sporulation protein AE (spore_III_AE) D9C08_16595 PF06686 Stage III sporulation protein AC/AD protein family D9C08_16600 PF06686 Stage III sporulation protein AC/AD protein family D9C08_16605 PF09548 Stage III sporulation protein AB (spore_III_AB) D9C08_16615 PF10942 Protein of unknown function (DUF2619) D9C08_16620 PF09285 Elongation factor P, C-terminal D9C08_16620 PF01132 Elongation factor P (EF-P) OB domain D9C08_16620 PF08207 Elongation factor P (EF-P) KOW-like domain D9C08_16625 PF01321 Creatinase/Prolidase N-terminal domain D9C08_16625 PF00557 Metallopeptidase family M24 D9C08_16630 PF01220 Dehydroquinase class II D9C08_16635 PF11085 Conserved membrane protein YqhR D9C08_16640 PF07136 Protein of unknown function (DUF1385) D9C08_16650 PF01734 Patatin-like phospholipase D9C08_16655 PF02742 Iron dependent repressor, metal binding and dimerisation domain D9C08_16655 PF01325 Iron dependent repressor, N-terminal DNA binding domain D9C08_16660 PF03099 Biotin/lipoate A/B protein ligase family D9C08_16665 PF00581 Rhodanese-like domain D9C08_16670 PF02347 Glycine cleavage system P-protein D9C08_16675 PF02347 Glycine cleavage system P-protein D9C08_16680 PF08669 Glycine cleavage T-protein C-terminal barrel domain D9C08_16680 PF01571 Aminomethyltransferase folate-binding domain D9C08_16685 PF00271 Helicase conserved C-terminal domain D9C08_16685 PF00176 SNF2 family N-terminal domain D9C08_16690 PF11079 Bacterial protein YqhG of unknown function D9C08_16695 PF08671 Anti-repressor SinI D9C08_16700 PF08671 Anti-repressor SinI D9C08_16700 PF01381 Helix-turn-helix D9C08_16705 PF12389 Camelysin metallo-endopeptidase D9C08_16720 PF13028 Protein of unknown function (DUF3889) D9C08_16725 PF14038 YqzE-like protein D9C08_16730 PF14173 ComG operon protein 7 D9C08_16735 PF15980 Putative Competence protein ComGF D9C08_16745 PF07963 Prokaryotic N-terminal methylation motif D9C08_16750 PF07963 Prokaryotic N-terminal methylation motif D9C08_16755 PF00482 Type II secretion system (T2SS), protein F D9C08_16760 PF00437 Type II/IV secretion system protein D9C08_16765 PF00571 CBS domain D9C08_16770 PF01544 CorA-like Mg2+ transporter protein D9C08_16775 PF03471 Transporter associated domain D9C08_16775 PF01595 Cyclin M transmembrane N-terminal domain D9C08_16775 PF00571 CBS domain D9C08_16780 PF01740 STAS domain D9C08_16780 PF14361 RsbT co-antagonist protein rsbRD N-terminal domain D9C08_16790 PF03960 ArsC family D9C08_16795 PF11117 Protein of unknown function (DUF2626) D9C08_16805 PF00753 Metallo-beta-lactamase superfamily D9C08_16810 PF10958 Protein of unknown function (DUF2759) D9C08_16815 PF01910 Thiamine-binding protein D9C08_16825 PF00246 Zinc carboxypeptidase D9C08_16830 PF00884 Sulfatase D9C08_16835 PF00480 ROK family D9C08_16840 PF06014 Bacterial protein of unknown function (DUF910) D9C08_16845 PF01694 Rhomboid family D9C08_16855 PF01812 5-formyltetrahydrofolate cyclo-ligase family D9C08_16860 PF00471 Ribosomal protein L33 D9C08_16865 PF13439 Glycosyltransferase Family 4 D9C08_16865 PF00534 Glycosyl transferases group 1 D9C08_16885 PF00005 ABC transporter D9C08_16890 PF00005 ABC transporter D9C08_16895 PF00528 Binding-protein-dependent transport system inner membrane component D9C08_16900 PF00528 Binding-protein-dependent transport system inner membrane component D9C08_16905 PF12849 PBP superfamily domain D9C08_16915 PF07690 Major Facilitator Superfamily D9C08_16920 PF02777 Iron/manganese superoxide dismutases, C-terminal domain D9C08_16920 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain D9C08_16925 PF04306 Protein of unknown function (DUF456) D9C08_16930 PF06691 Protein of unknown function (DUF1189) D9C08_16940 PF04551 GcpE protein D9C08_16955 PF01475 Ferric uptake regulator family D9C08_16960 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) D9C08_16960 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 D9C08_16965 PF11116 Protein of unknown function (DUF2624) D9C08_16970 PF01261 Xylose isomerase-like TIM barrel D9C08_16975 PF00271 Helicase conserved C-terminal domain D9C08_16975 PF00270 DEAD/DEAH box helicase D9C08_16980 PF14181 YqfQ-like protein D9C08_16985 PF02401 LytB protein D9C08_16990 PF01784 NIF3 (NGG1p interacting factor 3) D9C08_16995 PF04816 tRNA (adenine(22)-N(1))-methyltransferase D9C08_17000 PF13442 Cytochrome C oxidase, cbb3-type, subunit III D9C08_17010 PF04539 Sigma-70 region 3 D9C08_17010 PF04542 Sigma-70 region 2 D9C08_17010 PF00140 Sigma-70 factor, region 1.2 D9C08_17010 PF03979 Sigma-70 factor, region 1.1 D9C08_17010 PF04545 Sigma-70, region 4 D9C08_17015 PF01807 CHC2 zinc finger D9C08_17015 PF08275 DNA primase catalytic core, N-terminal domain D9C08_17015 PF10410 DnaB-helicase binding domain of primase D9C08_17020 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 D9C08_17025 PF03618 Kinase/pyrophosphorylase D9C08_17030 PF08279 HTH domain D9C08_17030 PF00571 CBS domain D9C08_17035 PF02092 Glycyl-tRNA synthetase beta subunit D9C08_17040 PF02091 Glycyl-tRNA synthetase alpha subunit D9C08_17045 PF11967 Recombination protein O N terminal D9C08_17045 PF02565 Recombination protein O C terminal D9C08_17050 PF14006 YqzL-like protein D9C08_17055 PF07650 KH domain D9C08_17055 PF01926 50S ribosome-binding GTPase D9C08_17060 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region D9C08_17065 PF01219 Prokaryotic diacylglycerol kinase D9C08_17070 PF02130 Uncharacterized protein family UPF0054 D9C08_17075 PF01966 HD domain D9C08_17075 PF07697 7TM-HD extracellular D9C08_17075 PF07698 7TM receptor with intracellular HD hydrolase D9C08_17080 PF02562 PhoH-like protein D9C08_17085 PF06898 Putative stage IV sporulation protein YqfD D9C08_17090 PF07873 YabP family D9C08_17100 PF12127 SigmaW regulon antibacterial D9C08_17105 PF01957 NfeD-like C-terminal, partner-binding D9C08_17105 PF01972 Serine dehydrogenase proteinase D9C08_17110 PF09424 Yqey-like protein D9C08_17115 PF01165 Ribosomal protein S21 D9C08_17120 PF02690 Na+/Pi-cotransporter D9C08_17125 PF04055 Radical SAM superfamily D9C08_17125 PF01938 TRAM domain D9C08_17125 PF00919 Uncharacterized protein family UPF0004 D9C08_17130 PF04452 RNA methyltransferase D9C08_17140 PF00684 DnaJ central domain D9C08_17140 PF01556 DnaJ C terminal domain D9C08_17140 PF00226 DnaJ domain D9C08_17145 PF00012 Hsp70 protein D9C08_17150 PF01025 GrpE D9C08_17155 PF01628 HrcA protein C terminal domain D9C08_17160 PF04055 Radical SAM superfamily D9C08_17160 PF06969 HemN C-terminal domain D9C08_17165 PF00679 Elongation factor G C-terminus D9C08_17165 PF03144 Elongation factor Tu domain 2 D9C08_17165 PF00009 Elongation factor Tu GTP binding domain D9C08_17165 PF06421 GTP-binding protein LepA C-terminus D9C08_17170 PF12438 Protein of unknown function (DUF3679) D9C08_17175 PF07454 Stage II sporulation protein P (SpoIIP) D9C08_17180 PF03418 Germination protease D9C08_17185 PF01649 Ribosomal protein S20 D9C08_17190 PF06144 DNA polymerase III, delta subunit D9C08_17200 PF14141 YqzM-like protein D9C08_17205 PF00753 Metallo-beta-lactamase superfamily D9C08_17205 PF13567 Domain of unknown function (DUF4131) D9C08_17205 PF03772 Competence protein D9C08_17210 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region D9C08_17215 PF10531 SLBB domain D9C08_17220 PF03807 NADP oxidoreductase coenzyme F420-dependent D9C08_17220 PF14748 Pyrroline-5-carboxylate reductase dimerisation D9C08_17225 PF13649 Methyltransferase domain D9C08_17235 PF01966 HD domain D9C08_17240 PF01467 Cytidylyltransferase-like D9C08_17245 PF01985 CRS1 / YhbY (CRM) domain D9C08_17250 PF08501 Shikimate dehydrogenase substrate binding domain D9C08_17250 PF18317 Shikimate 5'-dehydrogenase C-terminal domain D9C08_17250 PF01488 Shikimate / quinate 5-dehydrogenase D9C08_17255 PF01926 50S ribosome-binding GTPase D9C08_17265 PF08970 Sporulation inhibitor A D9C08_17270 PF00657 GDSL-like Lipase/Acylhydrolase D9C08_17275 PF01510 N-acetylmuramoyl-L-alanine amidase D9C08_17275 PF01471 Putative peptidoglycan binding domain D9C08_17280 PF09335 SNARE associated Golgi protein D9C08_17285 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase D9C08_17285 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain D9C08_17295 PF14040 Deoxyribonuclease NucA/NucB D9C08_17300 PF04542 Sigma-70 region 2 D9C08_17300 PF04545 Sigma-70, region 4 D9C08_17315 PF00206 Lyase D9C08_17315 PF10415 Fumarase C C-terminus D9C08_17320 PF03466 LysR substrate binding domain D9C08_17320 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D9C08_17335 PF13176 Tetratricopeptide repeat D9C08_17335 PF18801 response regulator aspartate phosphatase H, N terminal D9C08_17385 PF18593 CdiI immunity protein D9C08_17395 PF00665 Integrase core domain D9C08_17400 PF01695 IstB-like ATP binding protein D9C08_17435 PF17356 Phage-like element PBSX protein XtrA D9C08_17460 PF13411 MerR HTH family regulatory protein D9C08_17460 PF06445 GyrI-like small molecule binding domain D9C08_17465 PF07690 Major Facilitator Superfamily D9C08_17470 PF00583 Acetyltransferase (GNAT) family D9C08_17475 PF00872 Transposase, Mutator family D9C08_17485 PF01595 Cyclin M transmembrane N-terminal domain D9C08_17485 PF03471 Transporter associated domain D9C08_17485 PF00571 CBS domain D9C08_17490 PF14142 YrzO-like protein D9C08_17495 PF00892 EamA-like transporter family D9C08_17500 PF03466 LysR substrate binding domain D9C08_17500 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D9C08_17510 PF16916 Dimerisation domain of Zinc Transporter D9C08_17510 PF01545 Cation efflux family D9C08_17515 PF01609 Transposase DDE domain D9C08_17525 PF05525 Branched-chain amino acid transport protein D9C08_17530 PF05437 Branched-chain amino acid transport protein (AzlD) D9C08_17535 PF03591 AzlC protein D9C08_17540 PF01037 Lrp/AsnC ligand binding domain D9C08_17545 PF01337 Barstar (barnase inhibitor) D9C08_17555 PF00857 Isochorismatase family D9C08_17560 PF10823 Protein of unknown function (DUF2568) D9C08_17570 PF05163 DinB family D9C08_17575 PF04439 Streptomycin adenylyltransferase D9C08_17580 PF03060 Nitronate monooxygenase D9C08_17595 PF01177 Asp/Glu/Hydantoin racemase D9C08_17600 PF15493 Domain of unknown function, YrpD D9C08_17605 PF09680 Family of unknown function D9C08_17615 PF09223 ZinT (YodA) periplasmic lipocalin-like zinc-recruitment D9C08_17620 PF04542 Sigma-70 region 2 D9C08_17620 PF08281 Sigma-70, region 4 D9C08_17625 PF00248 Aldo/keto reductase family D9C08_17630 PF01374 Glycosyl hydrolase family 46 D9C08_17640 PF00561 alpha/beta hydrolase fold D9C08_17660 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily D9C08_17670 PF07875 Coat F domain D9C08_17675 PF00107 Zinc-binding dehydrogenase D9C08_17675 PF13823 Alcohol dehydrogenase GroES-associated D9C08_17675 PF08240 Alcohol dehydrogenase GroES-like domain D9C08_17685 PF07875 Coat F domain D9C08_17690 PF13411 MerR HTH family regulatory protein D9C08_17700 PF08240 Alcohol dehydrogenase GroES-like domain D9C08_17700 PF00107 Zinc-binding dehydrogenase D9C08_17705 PF01965 DJ-1/PfpI family D9C08_17710 PF00251 Glycosyl hydrolases family 32 N-terminal domain D9C08_17710 PF08244 Glycosyl hydrolases family 32 C terminal D9C08_17715 PF03613 PTS system mannose/fructose/sorbose family IID component D9C08_17720 PF03609 PTS system sorbose-specific iic component D9C08_17725 PF03830 PTS system sorbose subfamily IIB component D9C08_17730 PF03610 PTS system fructose IIA component D9C08_17735 PF03610 PTS system fructose IIA component D9C08_17735 PF00158 Sigma-54 interaction domain D9C08_17735 PF00874 PRD domain D9C08_17745 PF00324 Amino acid permease D9C08_17750 PF01810 LysE type translocator D9C08_17755 PF11495 Archaeal transcriptional regulator TrmB D9C08_17755 PF01978 Sugar-specific transcriptional regulator TrmB D9C08_17760 PF08281 Sigma-70, region 4 D9C08_17760 PF04542 Sigma-70 region 2 D9C08_17765 PF13739 Deacetylase PdaC D9C08_17765 PF11738 Protein of unknown function (DUF3298) D9C08_17775 PF14145 YrhK-like protein D9C08_17780 PF00067 Cytochrome P450 D9C08_17780 PF00175 Oxidoreductase NAD-binding domain D9C08_17780 PF00258 Flavodoxin D9C08_17780 PF00667 FAD binding domain D9C08_17785 PF16295 Tetracyclin repressor-like, C-terminal domain D9C08_17785 PF00440 Bacterial regulatory proteins, tetR family D9C08_17790 PF08241 Methyltransferase domain D9C08_17800 PF09501 Probable sporulation protein (Bac_small_yrzI) D9C08_17805 PF01226 Formate/nitrite transporter D9C08_17810 PF10057 Uncharacterized conserved protein (DUF2294) D9C08_17815 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region D9C08_17815 PF00037 4Fe-4S binding domain D9C08_17815 PF04879 Molybdopterin oxidoreductase Fe4S4 domain D9C08_17815 PF01568 Molydopterin dinucleotide binding domain D9C08_17815 PF00384 Molybdopterin oxidoreductase D9C08_17820 PF07849 Protein of unknown function (DUF1641) D9C08_17825 PF14143 YrhC-like protein D9C08_17830 PF01053 Cys/Met metabolism PLP-dependent enzyme D9C08_17835 PF00291 Pyridoxal-phosphate dependent enzyme D9C08_17840 PF01048 Phosphorylase superfamily D9C08_17845 PF13649 Methyltransferase domain D9C08_17850 PF10750 Protein of unknown function (DUF2536) D9C08_17855 PF07423 Domain of unknown function (DUF1510) D9C08_17860 PF00905 Penicillin binding protein transpeptidase domain D9C08_17860 PF03717 Penicillin-binding Protein dimerisation domain D9C08_17865 PF03449 Transcription elongation factor, N-terminal D9C08_17865 PF01272 Transcription elongation factor, GreA/GreB, C-term D9C08_17870 PF00485 Phosphoribulokinase / Uridine kinase family D9C08_17890 PF02618 YceG-like family D9C08_17895 PF06949 Protein of unknown function (DUF1292) D9C08_17900 PF03652 Holliday junction resolvase D9C08_17905 PF06135 IreB regulatory phosphoprotein D9C08_17910 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain D9C08_17910 PF02272 DHHA1 domain D9C08_17910 PF01411 tRNA synthetases class II (A) D9C08_17915 PF01594 AI-2E family transporter D9C08_17920 PF00005 ABC transporter D9C08_17925 PF00497 Bacterial extracellular solute-binding proteins, family 3 D9C08_17935 PF00528 Binding-protein-dependent transport system inner membrane component D9C08_17945 PF13056 Protein of unknown function (DUF3918) D9C08_17955 PF05239 PRC-barrel domain D9C08_17960 PF14490 Helix-hairpin-helix containing domain D9C08_17960 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain D9C08_17960 PF13538 UvrD-like helicase C-terminal domain D9C08_17965 PF13181 Tetratricopeptide repeat D9C08_17965 PF07719 Tetratricopeptide repeat D9C08_17975 PF00266 Aminotransferase class-V D9C08_17980 PF02082 Transcriptional regulator D9C08_17985 PF16193 AAA C-terminal domain D9C08_17985 PF05496 Holliday junction DNA helicase RuvB P-loop domain D9C08_17985 PF12002 MgsA AAA+ ATPase C terminal D9C08_17990 PF00899 ThiF family D9C08_18000 PF01336 OB-fold nucleic acid binding domain D9C08_18000 PF00152 tRNA synthetases class II (D, K and N) D9C08_18000 PF02938 GAD domain D9C08_18005 PF13393 Histidyl-tRNA synthetase D9C08_18005 PF03129 Anticodon binding domain D9C08_18010 PF17449 Uncharacterized YrzK-like D9C08_18015 PF08239 Bacterial SH3 domain D9C08_18015 PF01520 N-acetylmuramoyl-L-alanine amidase D9C08_18020 PF02580 D-Tyr-tRNA(Tyr) deacylase D9C08_18025 PF13291 ACT domain D9C08_18025 PF04607 Region found in RelA / SpoT proteins D9C08_18025 PF02824 TGS domain D9C08_18030 PF00156 Phosphoribosyl transferase domain D9C08_18035 PF17768 RecJ OB domain D9C08_18035 PF10141 Single-strand DNA-specific exonuclease, C terminal domain D9C08_18035 PF02272 DHHA1 domain D9C08_18035 PF01368 DHH family D9C08_18040 PF06305 Lipopolysaccharide assembly protein A domain D9C08_18045 PF02080 TrkA-C domain D9C08_18050 PF02355 Protein export membrane protein D9C08_18050 PF07549 SecD/SecF GG Motif D9C08_18055 PF13797 Post-transcriptional regulator D9C08_18060 PF14667 Polysaccharide biosynthesis C-terminal domain D9C08_18060 PF01943 Polysaccharide biosynthesis protein D9C08_18065 PF04239 Protein of unknown function (DUF421) D9C08_18070 PF12670 Protein of unknown function (DUF3792) D9C08_18075 PF02699 Preprotein translocase subunit D9C08_18080 PF01702 Queuine tRNA-ribosyltransferase D9C08_18085 PF02547 Queuosine biosynthesis protein D9C08_18090 PF11146 Protein of unknown function (DUF2905) D9C08_18095 PF17864 RuvB AAA lid domain D9C08_18095 PF05496 Holliday junction DNA helicase RuvB P-loop domain D9C08_18095 PF05491 RuvB C-terminal winged helix domain D9C08_18100 PF07499 RuvA, C-terminal domain D9C08_18100 PF01330 RuvA N terminal domain D9C08_18105 PF08977 Bypass of Forespore C, N terminal D9C08_18105 PF08955 BofC C-terminal domain D9C08_18110 PF07690 Major Facilitator Superfamily D9C08_18115 PF02894 Oxidoreductase family, C-terminal alpha/beta domain D9C08_18115 PF01408 Oxidoreductase family, NAD-binding Rossmann fold D9C08_18140 PF01235 Sodium:alanine symporter family D9C08_18145 PF01709 Transcriptional regulator D9C08_18150 PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) D9C08_18155 PF01476 LysM domain D9C08_18160 PF02445 Quinolinate synthetase A protein D9C08_18165 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain D9C08_18165 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain D9C08_18170 PF00890 FAD binding domain D9C08_18170 PF02910 Fumarate reductase flavoprotein C-term D9C08_18175 PF00266 Aminotransferase class-V D9C08_18180 PF08279 HTH domain D9C08_18180 PF02829 3H domain D9C08_18185 PF01842 ACT domain D9C08_18185 PF00800 Prephenate dehydratase D9C08_18190 PF01842 ACT domain D9C08_18195 PF01018 GTP1/OBG D9C08_18195 PF01926 50S ribosome-binding GTPase D9C08_18195 PF09269 Domain of unknown function (DUF1967) D9C08_18200 PF14682 Sporulation initiation phospho-transferase B, C-terminal D9C08_18200 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain D9C08_18210 PF01016 Ribosomal L27 protein D9C08_18215 PF04327 Cysteine protease Prp D9C08_18220 PF00829 Ribosomal prokaryotic L21 protein D9C08_18225 PF02163 Peptidase family M50 D9C08_18230 PF01551 Peptidase family M23 D9C08_18235 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain D9C08_18240 PF03775 Septum formation inhibitor MinC, C-terminal domain D9C08_18245 PF04093 rod shape-determining protein MreD D9C08_18250 PF04085 rod shape-determining protein MreC D9C08_18260 PF00633 Helix-hairpin-helix motif D9C08_18260 PF04002 RadC-like JAB domain D9C08_18265 PF02545 Maf-like protein D9C08_18270 PF05036 Sporulation related domain D9C08_18275 PF06750 Bacterial Peptidase A24 N-terminal domain D9C08_18275 PF01478 Type IV leader peptidase family D9C08_18280 PF08245 Mur ligase middle domain D9C08_18280 PF02875 Mur ligase family, glutamate ligase domain D9C08_18285 PF10458 Valyl tRNA synthetase tRNA binding arm D9C08_18285 PF08264 Anticodon-binding domain of tRNA D9C08_18285 PF00133 tRNA synthetases class I (I, L, M and V) D9C08_18300 PF01476 LysM domain D9C08_18305 PF00202 Aminotransferase class-III D9C08_18310 PF00490 Delta-aminolevulinic acid dehydratase D9C08_18315 PF02602 Uroporphyrinogen-III synthase HemD D9C08_18320 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain D9C08_18320 PF03900 Porphobilinogen deaminase, C-terminal domain D9C08_18325 PF01578 Cytochrome C assembly protein D9C08_18330 PF01488 Shikimate / quinate 5-dehydrogenase D9C08_18330 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain D9C08_18330 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain D9C08_18340 PF01926 50S ribosome-binding GTPase D9C08_18345 PF02190 ATP-dependent protease La (LON) substrate-binding domain D9C08_18345 PF00004 ATPase family associated with various cellular activities (AAA) D9C08_18345 PF05362 Lon protease (S16) C-terminal proteolytic domain D9C08_18350 PF00004 ATPase family associated with various cellular activities (AAA) D9C08_18350 PF05362 Lon protease (S16) C-terminal proteolytic domain D9C08_18355 PF06689 ClpX C4-type zinc finger D9C08_18355 PF07724 AAA domain (Cdc48 subfamily) D9C08_18355 PF10431 C-terminal, D2-small domain, of ClpB protein D9C08_18360 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase D9C08_18360 PF05698 Bacterial trigger factor protein (TF) C-terminus D9C08_18360 PF05697 Bacterial trigger factor protein (TF) D9C08_18370 PF00694 Aconitase C-terminal domain D9C08_18375 PF00330 Aconitase family (aconitate hydratase) D9C08_18380 PF00180 Isocitrate/isopropylmalate dehydrogenase D9C08_18385 PF08502 LeuA allosteric (dimerisation) domain D9C08_18385 PF00682 HMGL-like D9C08_18390 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain D9C08_18390 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain D9C08_18395 PF10369 Small subunit of acetolactate synthase D9C08_18395 PF01842 ACT domain D9C08_18400 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain D9C08_18400 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain D9C08_18400 PF00205 Thiamine pyrophosphate enzyme, central domain D9C08_18415 PF09557 Domain of unknown function (DUF2382) D9C08_18415 PF11181 Heat induced stress protein YflT D9C08_18435 PF01420 Type I restriction modification DNA specificity domain D9C08_18440 PF02384 N-6 DNA Methylase D9C08_18445 PF00271 Helicase conserved C-terminal domain D9C08_18445 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) D9C08_18445 PF04851 Type III restriction enzyme, res subunit D9C08_18445 PF08463 EcoEI R protein C-terminal D9C08_18460 PF00589 Phage integrase family D9C08_18460 PF02899 Phage integrase, N-terminal SAM-like domain D9C08_18470 PF12850 Calcineurin-like phosphoesterase superfamily domain D9C08_18475 PF01725 Ham1 family D9C08_18480 PF03725 3' exoribonuclease family, domain 2 D9C08_18480 PF01138 3' exoribonuclease family, domain 1 D9C08_18485 PF10646 Sporulation and spore germination D9C08_18490 PF01177 Asp/Glu/Hydantoin racemase D9C08_18495 PF01047 MarR family D9C08_18500 PF00196 Bacterial regulatory proteins, luxR family D9C08_18505 PF03061 Thioesterase superfamily D9C08_18510 PF13085 2Fe-2S iron-sulfur cluster binding domain D9C08_18510 PF13183 4Fe-4S dicluster domain D9C08_18515 PF02910 Fumarate reductase flavoprotein C-term D9C08_18515 PF00890 FAD binding domain D9C08_18520 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit D9C08_18525 PF10702 Protein of unknown function (DUF2507) D9C08_18530 PF00696 Amino acid kinase family D9C08_18530 PF01842 ACT domain D9C08_18530 PF13840 ACT domain D9C08_18540 PF08459 UvrC Helix-hairpin-helix N-terminal D9C08_18540 PF02151 UvrB/uvrC motif D9C08_18540 PF01541 GIY-YIG catalytic domain D9C08_18545 PF00085 Thioredoxin D9C08_18550 PF06964 Alpha-L-arabinofuranosidase C-terminal domain D9C08_18555 PF00766 Electron transfer flavoprotein FAD-binding domain D9C08_18555 PF01012 Electron transfer flavoprotein domain D9C08_18560 PF01012 Electron transfer flavoprotein domain D9C08_18565 PF00378 Enoyl-CoA hydratase/isomerase D9C08_18570 PF00440 Bacterial regulatory proteins, tetR family D9C08_18570 PF08359 YsiA-like protein, C-terminal region D9C08_18575 PF00501 AMP-binding enzyme D9C08_18575 PF13193 AMP-binding enzyme C-terminal domain D9C08_18580 PF03994 Domain of Unknown Function (DUF350) D9C08_18585 PF01713 Smr domain D9C08_18585 PF00488 MutS domain V D9C08_18590 PF14791 DNA polymerase beta thumb D9C08_18590 PF02811 PHP domain D9C08_18590 PF14716 Helix-hairpin-helix domain D9C08_18595 PF02674 Colicin V production protein D9C08_18600 PF05164 Cell division protein ZapA D9C08_18605 PF11858 Domain of unknown function (DUF3378) D9C08_18605 PF01351 Ribonuclease HII D9C08_18610 PF03147 Ferredoxin-fold anticodon binding domain D9C08_18610 PF03484 tRNA synthetase B5 domain D9C08_18610 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain D9C08_18610 PF01588 Putative tRNA binding domain D9C08_18610 PF03483 B3/4 domain D9C08_18615 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain D9C08_18615 PF01409 tRNA synthetases class II core domain (F) D9C08_18625 PF00588 SpoU rRNA Methylase family D9C08_18625 PF08032 RNA 2'-O ribose methyltransferase substrate binding D9C08_18630 PF14098 Small, acid-soluble spore protein I D9C08_18635 PF13556 PucR C-terminal helix-turn-helix domain D9C08_18635 PF17853 GGDEF-like domain D9C08_18635 PF05651 Putative sugar diacid recognition D9C08_18640 PF02913 FAD linked oxidases, C-terminal domain D9C08_18640 PF01565 FAD binding domain D9C08_18645 PF02754 Cysteine-rich domain D9C08_18645 PF13183 4Fe-4S dicluster domain D9C08_18650 PF12681 Glyoxalase-like domain D9C08_18660 PF13722 5TM C-terminal transporter carbon starvation CstA D9C08_18660 PF02554 Carbon starvation protein CstA D9C08_18665 PF06964 Alpha-L-arabinofuranosidase C-terminal domain D9C08_18670 PF00528 Binding-protein-dependent transport system inner membrane component D9C08_18675 PF00528 Binding-protein-dependent transport system inner membrane component D9C08_18680 PF01547 Bacterial extracellular solute-binding protein D9C08_18685 PF13685 Iron-containing alcohol dehydrogenase D9C08_18695 PF00596 Class II Aldolase and Adducin N-terminal domain D9C08_18700 PF00370 FGGY family of carbohydrate kinases, N-terminal domain D9C08_18700 PF02782 FGGY family of carbohydrate kinases, C-terminal domain D9C08_18705 PF02610 L-arabinose isomerase D9C08_18705 PF11762 L-arabinose isomerase C-terminal domain D9C08_18710 PF04616 Glycosyl hydrolases family 43 D9C08_18715 PF05343 M42 glutamyl aminopeptidase D9C08_18725 PF06961 Protein of unknown function (DUF1294) D9C08_18730 PF00453 Ribosomal protein L20 D9C08_18735 PF01632 Ribosomal protein L35 D9C08_18740 PF00707 Translation initiation factor IF-3, C-terminal domain D9C08_18740 PF05198 Translation initiation factor IF-3, N-terminal domain D9C08_18750 PF04172 LrgB-like family D9C08_18755 PF03788 LrgA family D9C08_18760 PF04397 LytTr DNA-binding domain D9C08_18760 PF00072 Response regulator receiver domain D9C08_18765 PF06580 Histidine kinase D9C08_18765 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D9C08_18765 PF07694 5TMR of 5TMR-LYT D9C08_18775 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain D9C08_18775 PF03129 Anticodon binding domain D9C08_18775 PF02824 TGS domain D9C08_18775 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) D9C08_18780 PF08812 YtxC-like family D9C08_18785 PF09335 SNARE associated Golgi protein D9C08_18790 PF01695 IstB-like ATP binding protein D9C08_18790 PF07319 Primosomal protein DnaI N-terminus D9C08_18795 PF07261 Replication initiation and membrane attachment D9C08_18800 PF03477 ATP cone domain D9C08_18805 PF02675 S-adenosylmethionine decarboxylase D9C08_18810 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain D9C08_18810 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain D9C08_18815 PF01638 HxlR-like helix-turn-helix D9C08_18820 PF07690 Major Facilitator Superfamily D9C08_18825 PF00248 Aldo/keto reductase family D9C08_18830 PF01121 Dephospho-CoA kinase D9C08_18835 PF02659 Putative manganese efflux pump D9C08_18840 PF06827 Zinc finger found in FPG and IleRS D9C08_18840 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain D9C08_18840 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain D9C08_18845 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain D9C08_18845 PF01367 5'-3' exonuclease, C-terminal SAM fold D9C08_18845 PF00476 DNA polymerase family A D9C08_18850 PF00989 PAS fold D9C08_18850 PF16736 Single Cache-like D9C08_18850 PF00512 His Kinase A (phospho-acceptor) domain D9C08_18850 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D9C08_18855 PF00486 Transcriptional regulatory protein, C terminal D9C08_18855 PF00072 Response regulator receiver domain D9C08_18860 PF00056 lactate/malate dehydrogenase, NAD binding domain D9C08_18860 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain D9C08_18865 PF00180 Isocitrate/isopropylmalate dehydrogenase D9C08_18870 PF00285 Citrate synthase, C-terminal domain D9C08_18880 PF04284 Protein of unknown function (DUF441) D9C08_18885 PF01594 AI-2E family transporter D9C08_18890 PF04186 FxsA cytoplasmic membrane protein D9C08_18895 PF00391 PEP-utilising enzyme, mobile domain D9C08_18895 PF00224 Pyruvate kinase, barrel domain D9C08_18895 PF02887 Pyruvate kinase, alpha/beta domain D9C08_18900 PF00365 Phosphofructokinase D9C08_18905 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit D9C08_18910 PF01039 Carboxyl transferase domain D9C08_18910 PF17848 Acetyl-coA carboxylase zinc finger domain D9C08_18915 PF03949 Malic enzyme, NAD binding domain D9C08_18915 PF00390 Malic enzyme, N-terminal domain D9C08_18920 PF17657 Bacterial DNA polymerase III alpha subunit finger domain D9C08_18920 PF02811 PHP domain D9C08_18920 PF07733 Bacterial DNA polymerase III alpha NTPase domain D9C08_18920 PF14579 Helix-hairpin-helix motif D9C08_18920 PF01336 OB-fold nucleic acid binding domain D9C08_18925 PF14034 Sporulation protein YtrH D9C08_18940 PF01368 DHH family D9C08_18940 PF02272 DHHA1 domain D9C08_18945 PF14007 YtpI-like protein D9C08_18950 PF00392 Bacterial regulatory proteins, gntR family D9C08_18950 PF03061 Thioesterase superfamily D9C08_18950 PF00571 CBS domain D9C08_18950 PF07085 DRTGG domain D9C08_18970 PF14698 Argininosuccinate lyase C-terminal D9C08_18970 PF00206 Lyase D9C08_18975 PF00764 Arginosuccinate synthase D9C08_18980 PF00994 Probable molybdopterin binding domain D9C08_18985 PF00871 Acetokinase family D9C08_18995 PF02384 N-6 DNA Methylase D9C08_19000 PF08534 Redoxin D9C08_19005 PF09579 Sporulation protein YtfJ (Spore_YtfJ) D9C08_19010 PF11167 Protein of unknown function (DUF2953) D9C08_19015 PF06271 RDD family D9C08_19020 PF01343 Peptidase family S49 D9C08_19025 PF01513 ATP-NAD kinase D9C08_19040 PF07969 Amidohydrolase family D9C08_19045 PF00501 AMP-binding enzyme D9C08_19045 PF13193 AMP-binding enzyme C-terminal domain D9C08_19050 PF00269 Small, acid-soluble spore proteins, alpha/beta type D9C08_19055 PF02568 Thiamine biosynthesis protein (ThiI) D9C08_19055 PF02926 THUMP domain D9C08_19060 PF00266 Aminotransferase class-V D9C08_19065 PF05525 Branched-chain amino acid transport protein D9C08_19070 PF06160 Septation ring formation regulator, EzrA D9C08_19075 PF02811 PHP domain D9C08_19080 PF00440 Bacterial regulatory proteins, tetR family D9C08_19085 PF13185 GAF domain D9C08_19090 PF00990 Diguanylate cyclase, GGDEF domain D9C08_19100 PF01479 S4 domain D9C08_19100 PF00163 Ribosomal protein S4/S9 N-terminal domain D9C08_19105 PF01479 S4 domain D9C08_19105 PF00579 tRNA synthetases class I (W and Y) D9C08_19110 PF13193 AMP-binding enzyme C-terminal domain D9C08_19110 PF00501 AMP-binding enzyme D9C08_19115 PF00583 Acetyltransferase (GNAT) family D9C08_19120 PF00571 CBS domain D9C08_19125 PF00850 Histone deacetylase domain D9C08_19130 PF00691 OmpA family D9C08_19130 PF13677 Membrane MotB of proton-channel complex MotA/MotB D9C08_19135 PF01618 MotA/TolQ/ExbB proton channel family D9C08_19140 PF00356 Bacterial regulatory proteins, lacI family D9C08_19145 PF00793 DAHP synthetase I family D9C08_19145 PF01817 Chorismate mutase type II D9C08_19150 PF11009 Protein of unknown function (DUF2847) D9C08_19155 PF12732 YtxH-like protein D9C08_19160 PF06103 Bacterial protein of unknown function (DUF948) D9C08_19165 PF01225 Mur ligase family, catalytic domain D9C08_19165 PF02875 Mur ligase family, glutamate ligase domain D9C08_19165 PF08245 Mur ligase middle domain D9C08_19170 PF01580 FtsK/SpoIIIE family D9C08_19170 PF09397 Ftsk gamma domain D9C08_19170 PF17854 FtsK alpha domain D9C08_19175 PF01588 Putative tRNA binding domain D9C08_19175 PF14794 Domain of unknown function (DUF4479) D9C08_19180 PF07285 Protein of unknown function (DUF1444) D9C08_19185 PF00085 Thioredoxin D9C08_19200 PF05343 M42 glutamyl aminopeptidase D9C08_19205 PF03413 Peptidase propeptide and YPEB domain D9C08_19210 PF03949 Malic enzyme, NAD binding domain D9C08_19210 PF00390 Malic enzyme, N-terminal domain D9C08_19215 PF00753 Metallo-beta-lactamase superfamily D9C08_19220 PF02390 Putative methyltransferase D9C08_19225 PF14165 YtzH-like protein D9C08_19230 PF01636 Phosphotransferase enzyme family D9C08_19235 PF00128 Alpha amylase, catalytic domain D9C08_19235 PF17999 Pullulanase N1-terminal domain D9C08_19235 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) D9C08_19240 PF00781 Diacylglycerol kinase catalytic domain D9C08_19255 PF00291 Pyridoxal-phosphate dependent enzyme D9C08_19260 PF01546 Peptidase family M20/M25/M40 D9C08_19265 PF00860 Permease family D9C08_19270 PF05975 Bacterial ABC transporter protein EcsB D9C08_19275 PF00005 ABC transporter D9C08_19280 PF08220 DeoR-like helix-turn-helix domain D9C08_19285 PF00849 RNA pseudouridylate synthase D9C08_19285 PF01479 S4 domain D9C08_19290 PF14667 Polysaccharide biosynthesis C-terminal domain D9C08_19290 PF01943 Polysaccharide biosynthesis protein D9C08_19300 PF02028 BCCT, betaine/carnitine/choline family transporter D9C08_19305 PF10957 Sporulation protein Cse60 D9C08_19325 PF07470 Glycosyl Hydrolase Family 88 D9C08_19330 PF00528 Binding-protein-dependent transport system inner membrane component D9C08_19340 PF13416 Bacterial extracellular solute-binding protein D9C08_19345 PF00528 Binding-protein-dependent transport system inner membrane component D9C08_19350 PF01370 NAD dependent epimerase/dehydratase family D9C08_19355 PF00067 Cytochrome P450 D9C08_19360 PF06968 Biotin and Thiamin Synthesis associated domain D9C08_19360 PF04055 Radical SAM superfamily D9C08_19370 PF00155 Aminotransferase class I and II D9C08_19385 PF01738 Dienelactone hydrolase family D9C08_19410 PF02056 Family 4 glycosyl hydrolase D9C08_19410 PF11975 Family 4 glycosyl hydrolase C-terminal domain D9C08_19415 PF00581 Rhodanese-like domain D9C08_19420 PF13603 Leucyl-tRNA synthetase, Domain 2 D9C08_19420 PF00133 tRNA synthetases class I (I, L, M and V) D9C08_19420 PF08264 Anticodon-binding domain of tRNA D9C08_19420 PF09334 tRNA synthetases class I (M) D9C08_19425 PF14074 Protein of unknown function (DUF4257) D9C08_19430 PF01740 STAS domain D9C08_19430 PF13426 PAS domain D9C08_19435 PF07690 Major Facilitator Superfamily D9C08_19445 PF02687 FtsX-like permease family D9C08_19450 PF00005 ABC transporter D9C08_19455 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D9C08_19460 PF00072 Response regulator receiver domain D9C08_19460 PF00486 Transcriptional regulatory protein, C terminal D9C08_19465 PF02687 FtsX-like permease family D9C08_19465 PF12704 MacB-like periplasmic core domain D9C08_19470 PF00005 ABC transporter D9C08_19485 PF00005 ABC transporter D9C08_19490 PF00392 Bacterial regulatory proteins, gntR family D9C08_19500 PF10732 Protein of unknown function (DUF2524) D9C08_19505 PF16199 Radical_SAM C-terminal domain D9C08_19505 PF04055 Radical SAM superfamily D9C08_19510 PF06962 Putative rRNA methylase D9C08_19515 PF10776 Protein of unknown function (DUF2600) D9C08_19520 PF12146 Serine aminopeptidase, S33 D9C08_19525 PF00132 Bacterial transferase hexapeptide (six repeats) D9C08_19530 PF00324 Amino acid permease D9C08_19535 PF13537 Glutamine amidotransferase domain D9C08_19535 PF00733 Asparagine synthase D9C08_19540 PF02772 S-adenosylmethionine synthetase, central domain D9C08_19540 PF00438 S-adenosylmethionine synthetase, N-terminal domain D9C08_19540 PF02773 S-adenosylmethionine synthetase, C-terminal domain D9C08_19545 PF01293 Phosphoenolpyruvate carboxykinase D9C08_19550 PF10763 Protein of unknown function (DUF2584) D9C08_19555 PF00326 Prolyl oligopeptidase family D9C08_19565 PF00005 ABC transporter D9C08_19570 PF00528 Binding-protein-dependent transport system inner membrane component D9C08_19575 PF00293 NUDIX domain D9C08_19580 PF05105 Bacteriophage holin family D9C08_19585 PF00210 Ferritin-like domain D9C08_19595 PF13115 YtkA-like D9C08_19600 PF02664 S-Ribosylhomocysteinase (LuxS) D9C08_19605 PF01809 Putative membrane protein insertion efficiency factor D9C08_19610 PF00484 Carbonic anhydrase D9C08_19615 PF01197 Ribosomal protein L31 D9C08_19620 PF01654 Cytochrome bd terminal oxidase subunit I D9C08_19625 PF02322 Cytochrome bd terminal oxidase subunit II D9C08_19630 PF07561 Domain of Unknown Function (DUF1540) D9C08_19635 PF00950 ABC 3 transport family D9C08_19640 PF00950 ABC 3 transport family D9C08_19645 PF00005 ABC transporter D9C08_19650 PF01297 Zinc-uptake complex component A periplasmic D9C08_19660 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain D9C08_19660 PF13378 Enolase C-terminal domain-like D9C08_19665 PF00501 AMP-binding enzyme D9C08_19665 PF13193 AMP-binding enzyme C-terminal domain D9C08_19670 PF00378 Enoyl-CoA hydratase/isomerase D9C08_19675 PF00561 alpha/beta hydrolase fold D9C08_19680 PF16582 Middle domain of thiamine pyrophosphate D9C08_19680 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain D9C08_19680 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain D9C08_19685 PF00425 chorismate binding enzyme D9C08_19690 PF01258 Prokaryotic dksA/traR C4-type zinc finger D9C08_19695 PF00483 Nucleotidyl transferase D9C08_19700 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain D9C08_19700 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain D9C08_19700 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain D9C08_19705 PF01370 NAD dependent epimerase/dehydratase family D9C08_19710 PF13439 Glycosyltransferase Family 4 D9C08_19710 PF00534 Glycosyl transferases group 1 D9C08_19725 PF00534 Glycosyl transferases group 1 D9C08_19725 PF13439 Glycosyltransferase Family 4 D9C08_19730 PF01636 Phosphotransferase enzyme family D9C08_19735 PF03073 TspO/MBR family D9C08_19740 PF00343 Carbohydrate phosphorylase D9C08_19745 PF00534 Glycosyl transferases group 1 D9C08_19745 PF08323 Starch synthase catalytic domain D9C08_19750 PF00483 Nucleotidyl transferase D9C08_19755 PF00483 Nucleotidyl transferase D9C08_19760 PF02806 Alpha amylase, C-terminal all-beta domain D9C08_19760 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) D9C08_19760 PF00128 Alpha amylase, catalytic domain D9C08_19885 PF09515 Thiamine transporter protein (Thia_YuaJ) D9C08_19890 PF00583 Acetyltransferase (GNAT) family D9C08_19895 PF01145 SPFH domain / Band 7 family D9C08_19895 PF15975 Flotillin D9C08_19905 PF12867 DinB superfamily D9C08_19920 PF00465 Iron-containing alcohol dehydrogenase D9C08_19935 PF17735 Biofilm surface layer A D9C08_19940 PF02080 TrkA-C domain D9C08_19940 PF02254 TrkA-N domain D9C08_19945 PF02386 Cation transport protein D9C08_19950 PF05360 yiaA/B two helix domain D9C08_19955 PF13457 GW (Gly-Tryp) dipeptide domain D9C08_19955 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase D9C08_19960 PF07690 Major Facilitator Superfamily D9C08_19965 PF05995 Cysteine dioxygenase type I D9C08_19975 PF02673 Bacitracin resistance protein BacA D9C08_19980 PF01594 AI-2E family transporter D9C08_19985 PF02894 Oxidoreductase family, C-terminal alpha/beta domain D9C08_19985 PF01408 Oxidoreductase family, NAD-binding Rossmann fold D9C08_19990 PF06134 L-rhamnose isomerase (RhaA) D9C08_19995 PF05336 L-rhamnose mutarotase D9C08_20000 PF02782 FGGY family of carbohydrate kinases, C-terminal domain D9C08_20000 PF00370 FGGY family of carbohydrate kinases, N-terminal domain D9C08_20005 PF08220 DeoR-like helix-turn-helix domain D9C08_20005 PF00455 DeoR C terminal sensor domain D9C08_20010 PF00596 Class II Aldolase and Adducin N-terminal domain D9C08_20025 PF02743 Cache domain D9C08_20025 PF00672 HAMP domain D9C08_20025 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain D9C08_20030 PF00672 HAMP domain D9C08_20030 PF02743 Cache domain D9C08_20030 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain D9C08_20035 PF02743 Cache domain D9C08_20035 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain D9C08_20035 PF00672 HAMP domain D9C08_20060 PF01595 Cyclin M transmembrane N-terminal domain D9C08_20060 PF03471 Transporter associated domain D9C08_20060 PF00571 CBS domain D9C08_20065 PF04298 Putative neutral zinc metallopeptidase D9C08_20075 PF11458 Membrane-integrating protein Mistic D9C08_20080 PF02254 TrkA-N domain D9C08_20080 PF07885 Ion channel D9C08_20085 PF08868 YugN-like family D9C08_20095 PF00342 Phosphoglucose isomerase D9C08_20100 PF00465 Iron-containing alcohol dehydrogenase D9C08_20105 PF00465 Iron-containing alcohol dehydrogenase D9C08_20110 PF04070 Domain of unknown function (DUF378) D9C08_20115 PF00575 S1 RNA binding domain D9C08_20120 PF00155 Aminotransferase class I and II D9C08_20125 PF01037 Lrp/AsnC ligand binding domain D9C08_20130 PF08386 TAP-like protein D9C08_20130 PF00561 alpha/beta hydrolase fold D9C08_20135 PF08958 Domain of unknown function (DUF1871) D9C08_20140 PF00155 Aminotransferase class I and II D9C08_20145 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D9C08_20145 PF00512 His Kinase A (phospho-acceptor) domain D9C08_20150 PF08810 Kinase associated protein B D9C08_20155 PF00929 Exonuclease D9C08_20165 PF07690 Major Facilitator Superfamily D9C08_20170 PF00912 Transglycosylase D9C08_20170 PF00905 Penicillin binding protein transpeptidase domain D9C08_20175 PF04134 Protein of unknown function, DUF393 D9C08_20180 PF17328 Family of unknown function (DUF5366) D9C08_20185 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain D9C08_20185 PF17203 Single cache domain 3 D9C08_20185 PF00989 PAS fold D9C08_20185 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D9C08_20190 PF00072 Response regulator receiver domain D9C08_20215 PF03390 2-hydroxycarboxylate transporter family D9C08_20225 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus D9C08_20225 PF00361 Proton-conducting membrane transporter D9C08_20225 PF13244 Domain of unknown function (DUF4040) D9C08_20230 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter D9C08_20235 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L D9C08_20240 PF00361 Proton-conducting membrane transporter D9C08_20245 PF01899 Na+/H+ ion antiporter subunit D9C08_20250 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) D9C08_20255 PF03334 Na+/H+ antiporter subunit D9C08_20260 PF03061 Thioesterase superfamily D9C08_20265 PF00196 Bacterial regulatory proteins, luxR family D9C08_20265 PF00072 Response regulator receiver domain D9C08_20270 PF07730 Histidine kinase D9C08_20270 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D9C08_20280 PF00348 Polyprenyl synthetase D9C08_20285 PF08181 DegQ (SacQ) family D9C08_20300 PF00563 EAL domain D9C08_20300 PF08668 HDOD domain D9C08_20305 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family D9C08_20305 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain D9C08_20305 PF17956 Nicotinate phosphoribosyltransferase C-terminal domain D9C08_20310 PF00857 Isochorismatase family D9C08_20315 PF07997 Protein of unknown function (DUF1694) D9C08_20320 PF14166 YueH-like protein D9C08_20325 PF10676 Spore germination protein gerPA/gerPF D9C08_20330 PF01594 AI-2E family transporter D9C08_20335 PF10049 Protein of unknown function (DUF2283) D9C08_20340 PF10842 Protein of unknown function (DUF2642) D9C08_20345 PF01966 HD domain D9C08_20350 PF00106 short chain dehydrogenase D9C08_20355 PF17355 Family of unknown function (DUF5383) D9C08_20365 PF12538 DNA transporter D9C08_20365 PF01580 FtsK/SpoIIIE family D9C08_20370 PF10140 WXG100 protein secretion system (Wss), protein YukC D9C08_20375 PF08817 WXG100 protein secretion system (Wss), protein YukD D9C08_20380 PF06013 Proteins of 100 residues with WXG D9C08_20390 PF06018 CodY GAF-like domain D9C08_20390 PF17853 GGDEF-like domain D9C08_20390 PF13556 PucR C-terminal helix-turn-helix domain D9C08_20395 PF01262 Alanine dehydrogenase/PNT, C-terminal domain D9C08_20395 PF05222 Alanine dehydrogenase/PNT, N-terminal domain D9C08_20400 PF10042 Uncharacterized conserved protein (DUF2278) D9C08_20405 PF03621 MbtH-like protein D9C08_20415 PF00550 Phosphopantetheine attachment site D9C08_20415 PF00857 Isochorismatase family D9C08_20420 PF13193 AMP-binding enzyme C-terminal domain D9C08_20420 PF00501 AMP-binding enzyme D9C08_20425 PF00425 chorismate binding enzyme D9C08_20430 PF00106 short chain dehydrogenase D9C08_20435 PF00756 Putative esterase D9C08_20440 PF00174 Oxidoreductase molybdopterin binding domain D9C08_20445 PF02632 BioY family D9C08_20450 PF13726 Na+-H+ antiporter family D9C08_20450 PF03553 Na+/H+ antiporter family D9C08_20455 PF02789 Cytosol aminopeptidase family, N-terminal domain D9C08_20455 PF00883 Cytosol aminopeptidase family, catalytic domain D9C08_20460 PF02681 Divergent PAP2 family D9C08_20465 PF06725 3D domain D9C08_20470 PF14068 Putative membrane protein D9C08_20475 PF17302 Family of unknown function (DUF5351) D9C08_20480 PF07992 Pyridine nucleotide-disulphide oxidoreductase D9C08_20485 PF07992 Pyridine nucleotide-disulphide oxidoreductase D9C08_20495 PF00478 IMP dehydrogenase / GMP reductase domain D9C08_20510 PF01521 Iron-sulphur cluster biosynthesis D9C08_20515 PF01678 Diaminopimelate epimerase D9C08_20520 PF01773 Na+ dependent nucleoside transporter N-terminus D9C08_20520 PF07662 Na+ dependent nucleoside transporter C-terminus D9C08_20530 PF07293 Protein of unknown function (DUF1450) D9C08_20535 PF07992 Pyridine nucleotide-disulphide oxidoreductase D9C08_20540 PF07315 Protein of unknown function (DUF1462) D9C08_20545 PF01106 NifU-like domain D9C08_20550 PF07676 WD40-like Beta Propeller Repeat D9C08_20550 PF00326 Prolyl oligopeptidase family D9C08_20555 PF08544 GHMP kinases C terminal D9C08_20555 PF00288 GHMP kinases N terminal domain D9C08_20560 PF00291 Pyridoxal-phosphate dependent enzyme D9C08_20565 PF01842 ACT domain D9C08_20565 PF03447 Homoserine dehydrogenase, NAD binding domain D9C08_20565 PF00742 Homoserine dehydrogenase D9C08_20575 PF04608 Phosphatidylglycerophosphatase A D9C08_20580 PF13344 Haloacid dehalogenase-like hydrolase D9C08_20585 PF01934 Protein of unknown function DUF86 D9C08_20590 PF06265 Protein of unknown function (DUF1027) D9C08_20595 PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) D9C08_20600 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family D9C08_20600 PF04055 Radical SAM superfamily D9C08_20605 PF01551 Peptidase family M23 D9C08_20610 PF09560 Sporulation protein YunB (Spo_YunB) D9C08_20615 PF08827 Domain of unknown function (DUF1805) D9C08_20620 PF02872 5'-nucleotidase, C-terminal domain D9C08_20625 PF01925 Sulfite exporter TauE/SafE D9C08_20630 PF01904 Protein of unknown function DUF72 D9C08_20640 PF01979 Amidohydrolase family D9C08_20645 PF07905 Purine catabolism regulatory protein-like family D9C08_20645 PF13556 PucR C-terminal helix-turn-helix domain D9C08_20645 PF17853 GGDEF-like domain D9C08_20650 PF00860 Permease family D9C08_20655 PF00860 Permease family D9C08_20660 PF01014 Uricase D9C08_20660 PF09349 OHCU decarboxylase D9C08_20665 PF00576 HIUase/Transthyretin family D9C08_20675 PF09680 Family of unknown function D9C08_20680 PF01799 [2Fe-2S] binding domain D9C08_20680 PF00111 2Fe-2S iron-sulfur cluster binding domain D9C08_20685 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain D9C08_20685 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase D9C08_20690 PF00941 FAD binding domain in molybdopterin dehydrogenase D9C08_20695 PF12804 MobA-like NTP transferase domain D9C08_20700 PF13478 XdhC Rossmann domain D9C08_20700 PF02625 XdhC and CoxI family D9C08_20705 PF00266 Aminotransferase class-V D9C08_20710 PF01546 Peptidase family M20/M25/M40 D9C08_20720 PF04231 Endonuclease I D9C08_20725 PF00005 ABC transporter D9C08_20725 PF17912 MalK OB fold domain D9C08_20725 PF03459 TOBE domain D9C08_20730 PF00392 Bacterial regulatory proteins, gntR family D9C08_20730 PF07702 UTRA domain D9C08_20735 PF00294 pfkB family carbohydrate kinase D9C08_20745 PF00528 Binding-protein-dependent transport system inner membrane component D9C08_20750 PF01547 Bacterial extracellular solute-binding protein D9C08_20755 PF01380 SIS domain D9C08_20760 PF01541 GIY-YIG catalytic domain D9C08_20765 PF01266 FAD dependent oxidoreductase D9C08_20785 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily D9C08_20800 PF14411 A nuclease of the HNH/ENDO VII superfamily with conserved LHH D9C08_20800 PF04740 LXG domain of WXG superfamily D9C08_20810 PF01471 Putative peptidoglycan binding domain D9C08_20810 PF01510 N-acetylmuramoyl-L-alanine amidase D9C08_20810 PF01476 LysM domain D9C08_20815 PF05105 Bacteriophage holin family D9C08_20850 PF01464 Transglycosylase SLT domain D9C08_20945 PF00589 Phage integrase family D9C08_20955 PF09643 YopX protein D9C08_20985 PF17356 Phage-like element PBSX protein XtrA D9C08_21020 PF01381 Helix-turn-helix D9C08_21025 PF09856 Predicted transcriptional regulator (DUF2083) D9C08_21025 PF06114 IrrE N-terminal-like domain D9C08_21025 PF01381 Helix-turn-helix D9C08_21045 PF01458 Uncharacterized protein family (UPF0051) D9C08_21050 PF01592 NifU-like N terminal domain D9C08_21055 PF00266 Aminotransferase class-V D9C08_21060 PF01458 Uncharacterized protein family (UPF0051) D9C08_21065 PF00005 ABC transporter D9C08_21080 PF02627 Carboxymuconolactone decarboxylase family D9C08_21085 PF03180 NLPA lipoprotein D9C08_21090 PF00528 Binding-protein-dependent transport system inner membrane component D9C08_21095 PF00005 ABC transporter D9C08_21095 PF09383 NIL domain D9C08_21100 PF02036 SCP-2 sterol transfer family D9C08_21105 PF00085 Thioredoxin D9C08_21110 PF01751 Toprim domain D9C08_21115 PF10830 Protein of unknown function (DUF2553) D9C08_21120 PF01597 Glycine cleavage H-protein D9C08_21125 PF03960 ArsC family D9C08_21130 PF02771 Acyl-CoA dehydrogenase, N-terminal domain D9C08_21130 PF00441 Acyl-CoA dehydrogenase, C-terminal domain D9C08_21130 PF02770 Acyl-CoA dehydrogenase, middle domain D9C08_21135 PF00108 Thiolase, N-terminal domain D9C08_21135 PF02803 Thiolase, C-terminal domain D9C08_21140 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain D9C08_21140 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain D9C08_21140 PF00378 Enoyl-CoA hydratase/isomerase D9C08_21145 PF14115 YuzL-like protein D9C08_21150 PF01619 Proline dehydrogenase D9C08_21160 PF07875 Coat F domain D9C08_21165 PF01047 MarR family D9C08_21170 PF07690 Major Facilitator Superfamily D9C08_21175 PF14552 Tautomerase enzyme D9C08_21185 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D9C08_21185 PF03466 LysR substrate binding domain D9C08_21190 PF10835 Protein of unknown function (DUF2573) D9C08_21195 PF00005 ABC transporter D9C08_21200 PF14039 YusW-like protein D9C08_21215 PF00005 ABC transporter D9C08_21250 PF00155 Aminotransferase class I and II D9C08_21265 PF00210 Ferritin-like domain D9C08_21275 PF13180 PDZ domain D9C08_21280 PF00486 Transcriptional regulatory protein, C terminal D9C08_21280 PF00072 Response regulator receiver domain D9C08_21285 PF00512 His Kinase A (phospho-acceptor) domain D9C08_21285 PF00672 HAMP domain D9C08_21285 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D9C08_21295 PF00440 Bacterial regulatory proteins, tetR family D9C08_21300 PF00206 Lyase D9C08_21300 PF10415 Fumarase C C-terminus D9C08_21305 PF13113 Protein of unknown function (DUF3970) D9C08_21310 PF03323 Bacillus/Clostridium GerA spore germination protein D9C08_21315 PF03845 Spore germination protein D9C08_21320 PF05504 Spore germination B3/ GerAC like, C-terminal D9C08_21325 PF00072 Response regulator receiver domain D9C08_21325 PF00196 Bacterial regulatory proteins, luxR family D9C08_21330 PF00672 HAMP domain D9C08_21330 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D9C08_21330 PF07730 Histidine kinase D9C08_21335 PF09922 Cell wall-active antibiotics response 4TMS YvqF D9C08_21340 PF13349 Putative adhesin D9C08_21345 PF04012 PspA/IM30 family D9C08_21355 PF07690 Major Facilitator Superfamily D9C08_21360 PF01923 Cobalamin adenosyltransferase D9C08_21365 PF00005 ABC transporter D9C08_21370 PF01032 FecCD transport family D9C08_21375 PF01497 Periplasmic binding protein D9C08_21380 PF00106 short chain dehydrogenase D9C08_21385 PF08450 SMP-30/Gluconolactonase/LRE-like region D9C08_21390 PF00512 His Kinase A (phospho-acceptor) domain D9C08_21390 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D9C08_21395 PF00486 Transcriptional regulatory protein, C terminal D9C08_21395 PF00072 Response regulator receiver domain D9C08_21405 PF04545 Sigma-70, region 4 D9C08_21410 PF12841 YvrJ protein family D9C08_21415 PF00190 Cupin D9C08_21420 PF14184 Regulatory protein YrvL D9C08_21425 PF12704 MacB-like periplasmic core domain D9C08_21425 PF02687 FtsX-like permease family D9C08_21430 PF00005 ABC transporter D9C08_21435 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion D9C08_21440 PF00005 ABC transporter D9C08_21445 PF01032 FecCD transport family D9C08_21450 PF01032 FecCD transport family D9C08_21455 PF01497 Periplasmic binding protein D9C08_21465 PF13520 Amino acid permease D9C08_21475 PF09575 Small spore protein J (Spore_SspJ) D9C08_21480 PF04307 LexA-binding, inner membrane-associated putative hydrolase D9C08_21485 PF00884 Sulfatase D9C08_21490 PF12727 PBP superfamily domain D9C08_21490 PF12728 Helix-turn-helix domain D9C08_21500 PF00528 Binding-protein-dependent transport system inner membrane component D9C08_21505 PF00248 Aldo/keto reductase family D9C08_21515 PF00999 Sodium/hydrogen exchanger family D9C08_21520 PF01077 Nitrite and sulphite reductase 4Fe-4S domain D9C08_21520 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain D9C08_21525 PF00175 Oxidoreductase NAD-binding domain D9C08_21525 PF00258 Flavodoxin D9C08_21525 PF00667 FAD binding domain D9C08_21530 PF13538 UvrD-like helicase C-terminal domain D9C08_21540 PF03458 UPF0126 domain D9C08_21545 PF02600 Disulfide bond formation protein DsbB D9C08_21550 PF13462 Thioredoxin D9C08_21555 PF00403 Heavy-metal-associated domain D9C08_21565 PF00403 Heavy-metal-associated domain D9C08_21570 PF00403 Heavy-metal-associated domain D9C08_21575 PF02583 Metal-sensitive transcriptional repressor D9C08_21580 PF02894 Oxidoreductase family, C-terminal alpha/beta domain D9C08_21580 PF01408 Oxidoreductase family, NAD-binding Rossmann fold D9C08_21595 PF17314 Family of unknown function (DUF5360) D9C08_21600 PF00893 Small Multidrug Resistance protein D9C08_21605 PF00440 Bacterial regulatory proteins, tetR family D9C08_21610 PF00106 short chain dehydrogenase D9C08_21620 PF14410 HNH/ENDO VII superfamily nuclease with conserved GHE residues D9C08_21620 PF14449 Pre-toxin TG D9C08_21620 PF04740 LXG domain of WXG superfamily D9C08_21635 PF01476 LysM domain D9C08_21635 PF01510 N-acetylmuramoyl-L-alanine amidase D9C08_21635 PF01471 Putative peptidoglycan binding domain D9C08_21640 PF05105 Bacteriophage holin family D9C08_21665 PF05257 CHAP domain D9C08_21665 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase D9C08_21780 PF00589 Phage integrase family D9C08_21795 PF09643 YopX protein D9C08_21830 PF17356 Phage-like element PBSX protein XtrA D9C08_21890 PF01668 SmpB protein D9C08_21895 PF00575 S1 RNA binding domain D9C08_21895 PF17876 Cold shock domain D9C08_21895 PF08206 Ribonuclease B OB domain D9C08_21895 PF00773 RNB domain D9C08_21900 PF12146 Serine aminopeptidase, S33 D9C08_21905 PF03840 Preprotein translocase SecG subunit D9C08_21910 PF00561 alpha/beta hydrolase fold D9C08_21915 PF01381 Helix-turn-helix D9C08_21930 PF01638 HxlR-like helix-turn-helix D9C08_21935 PF12729 Four helix bundle sensory module for signal transduction D9C08_21935 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain D9C08_21935 PF00672 HAMP domain D9C08_21945 PF00528 Binding-protein-dependent transport system inner membrane component D9C08_21950 PF04069 Substrate binding domain of ABC-type glycine betaine transport system D9C08_21955 PF00528 Binding-protein-dependent transport system inner membrane component D9C08_21960 PF00571 CBS domain D9C08_21960 PF00005 ABC transporter D9C08_21965 PF12802 MarR family D9C08_21970 PF00528 Binding-protein-dependent transport system inner membrane component D9C08_21975 PF04069 Substrate binding domain of ABC-type glycine betaine transport system D9C08_21980 PF00528 Binding-protein-dependent transport system inner membrane component D9C08_21985 PF00571 CBS domain D9C08_21985 PF00005 ABC transporter D9C08_21990 PF12802 MarR family D9C08_21995 PF01914 MarC family integral membrane protein D9C08_22000 PF11724 YvbH-like oligomerisation region D9C08_22000 PF08000 Bacterial PH domain D9C08_22010 PF13240 zinc-ribbon domain D9C08_22015 PF00583 Acetyltransferase (GNAT) family D9C08_22020 PF00113 Enolase, C-terminal TIM barrel domain D9C08_22020 PF03952 Enolase, N-terminal domain D9C08_22025 PF01676 Metalloenzyme superfamily D9C08_22025 PF06415 BPG-independent PGAM N-terminus (iPGM_N) D9C08_22030 PF00121 Triosephosphate isomerase D9C08_22035 PF00162 Phosphoglycerate kinase D9C08_22040 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain D9C08_22040 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain D9C08_22045 PF04198 Putative sugar-binding domain D9C08_22050 PF00083 Sugar (and other) transporter D9C08_22055 PF00392 Bacterial regulatory proteins, gntR family D9C08_22060 PF00296 Luciferase-like monooxygenase D9C08_22070 PF03466 LysR substrate binding domain D9C08_22070 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D9C08_22075 PF00892 EamA-like transporter family D9C08_22080 PF00324 Amino acid permease D9C08_22090 PF02589 LUD domain D9C08_22095 PF11870 Domain of unknown function (DUF3390) D9C08_22095 PF13183 4Fe-4S dicluster domain D9C08_22095 PF02589 LUD domain D9C08_22100 PF02754 Cysteine-rich domain D9C08_22115 PF00196 Bacterial regulatory proteins, luxR family D9C08_22115 PF00072 Response regulator receiver domain D9C08_22120 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D9C08_22120 PF07730 Histidine kinase D9C08_22130 PF00005 ABC transporter D9C08_22135 PF12697 Alpha/beta hydrolase family D9C08_22140 PF07228 Stage II sporulation protein E (SpoIIE) D9C08_22140 PF13426 PAS domain D9C08_22145 PF07745 Glycosyl hydrolase family 53 D9C08_22150 PF02449 Beta-galactosidase D9C08_22150 PF08533 Beta-galactosidase C-terminal domain D9C08_22150 PF08532 Beta-galactosidase trimerisation domain D9C08_22155 PF00528 Binding-protein-dependent transport system inner membrane component D9C08_22160 PF00528 Binding-protein-dependent transport system inner membrane component D9C08_22165 PF13416 Bacterial extracellular solute-binding protein D9C08_22170 PF00356 Bacterial regulatory proteins, lacI family D9C08_22175 PF07729 FCD domain D9C08_22175 PF00392 Bacterial regulatory proteins, gntR family D9C08_22180 PF02652 L-lactate permease D9C08_22190 PF09628 YvfG protein D9C08_22195 PF04230 Polysaccharide pyruvyl transferase D9C08_22200 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family D9C08_22205 PF00132 Bacterial transferase hexapeptide (six repeats) D9C08_22205 PF17836 PglD N-terminal domain D9C08_22210 PF02397 Bacterial sugar transferase D9C08_22215 PF01943 Polysaccharide biosynthesis protein D9C08_22215 PF14667 Polysaccharide biosynthesis C-terminal domain D9C08_22220 PF00535 Glycosyl transferase family 2 D9C08_22225 PF04230 Polysaccharide pyruvyl transferase D9C08_22230 PF00535 Glycosyl transferase family 2 D9C08_22240 PF13439 Glycosyltransferase Family 4 D9C08_22240 PF00534 Glycosyl transferases group 1 D9C08_22245 PF00535 Glycosyl transferase family 2 D9C08_22250 PF13439 Glycosyltransferase Family 4 D9C08_22250 PF00534 Glycosyl transferases group 1 D9C08_22255 PF02719 Polysaccharide biosynthesis protein D9C08_22260 PF13614 AAA domain D9C08_22265 PF02706 Chain length determinant protein D9C08_22270 PF01381 Helix-turn-helix D9C08_22270 PF08671 Anti-repressor SinI D9C08_22275 PF00135 Carboxylesterase family D9C08_22285 PF05870 Phenolic acid decarboxylase (PAD) D9C08_22310 PF02435 Levansucrase/Invertase D9C08_22315 PF00251 Glycosyl hydrolases family 32 N-terminal domain D9C08_22315 PF08244 Glycosyl hydrolases family 32 C terminal D9C08_22320 PF13520 Amino acid permease D9C08_22325 PF17934 Tetracyclin repressor-like, C-terminal domain D9C08_22325 PF00440 Bacterial regulatory proteins, tetR family D9C08_22330 PF00893 Small Multidrug Resistance protein D9C08_22335 PF00893 Small Multidrug Resistance protein D9C08_22350 PF00574 Clp protease D9C08_22355 PF13419 Haloacid dehalogenase-like hydrolase D9C08_22360 PF00128 Alpha amylase, catalytic domain D9C08_22360 PF16657 Maltogenic Amylase, C-terminal domain D9C08_22365 PF03636 Glycosyl hydrolase family 65, N-terminal domain D9C08_22365 PF03633 Glycosyl hydrolase family 65, C-terminal domain D9C08_22365 PF03632 Glycosyl hydrolase family 65 central catalytic domain D9C08_22370 PF06691 Protein of unknown function (DUF1189) D9C08_22375 PF00528 Binding-protein-dependent transport system inner membrane component D9C08_22380 PF00528 Binding-protein-dependent transport system inner membrane component D9C08_22385 PF13416 Bacterial extracellular solute-binding protein D9C08_22390 PF02903 Alpha amylase, N-terminal ig-like domain D9C08_22390 PF00128 Alpha amylase, catalytic domain D9C08_22395 PF00356 Bacterial regulatory proteins, lacI family D9C08_22400 PF03641 Possible lysine decarboxylase D9C08_22405 PF03819 MazG nucleotide pyrophosphohydrolase domain D9C08_22410 PF01740 STAS domain D9C08_22410 PF00916 Sulfate permease family D9C08_22415 PF00484 Carbonic anhydrase D9C08_22420 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain D9C08_22420 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain D9C08_22425 PF02687 FtsX-like permease family D9C08_22430 PF00005 ABC transporter D9C08_22435 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D9C08_22440 PF00072 Response regulator receiver domain D9C08_22440 PF00486 Transcriptional regulatory protein, C terminal D9C08_22450 PF00797 N-acetyltransferase D9C08_22455 PF00381 PTS HPr component phosphorylation site D9C08_22460 PF02650 WhiA C-terminal HTH domain D9C08_22460 PF14527 WhiA LAGLIDADG-like domain D9C08_22460 PF10298 WhiA N-terminal LAGLIDADG-like domain D9C08_22465 PF01933 Uncharacterised protein family UPF0052 D9C08_22470 PF03668 P-loop ATPase protein family D9C08_22475 PF00293 NUDIX domain D9C08_22480 PF07992 Pyridine nucleotide-disulphide oxidoreductase D9C08_22485 PF00877 NlpC/P60 family D9C08_22490 PF05860 haemagglutination activity domain D9C08_22490 PF13332 Hemagglutinin repeat D9C08_22490 PF03543 Yersinia/Haemophilus virulence surface antigen D9C08_22490 PF13018 Extended Signal Peptide of Type V secretion system D9C08_22490 PF02661 Fic/DOC family D9C08_22545 PF02687 FtsX-like permease family D9C08_22545 PF12704 MacB-like periplasmic core domain D9C08_22545 PF00005 ABC transporter D9C08_22595 PF17874 MalT-like TPR region D9C08_22595 PF18801 response regulator aspartate phosphatase H, N terminal D9C08_22640 PF04545 Sigma-70, region 4 D9C08_22645 PF12841 YvrJ protein family D9C08_22705 PF00872 Transposase, Mutator family D9C08_22755 PF18277 AbrB C-terminal domain D9C08_22755 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin D9C08_22780 PF17854 FtsK alpha domain D9C08_22780 PF09397 Ftsk gamma domain D9C08_22780 PF01580 FtsK/SpoIIIE family D9C08_22840 PF00872 Transposase, Mutator family D9C08_22875 PF14040 Deoxyribonuclease NucA/NucB D9C08_22900 PF18801 response regulator aspartate phosphatase H, N terminal D9C08_22910 PF04002 RadC-like JAB domain D9C08_22910 PF12826 Helix-hairpin-helix motif D9C08_22955 PF00746 LPXTG cell wall anchor motif D9C08_22955 PF17961 Bacterial Ig domain D9C08_22955 PF04650 YSIRK type signal peptide D9C08_22955 PF10425 C-terminus of bacterial fibrinogen-binding adhesin D9C08_22955 PF17210 SdrD B-like domain D9C08_22960 PF04203 Sortase domain D9C08_23015 PF06207 Protein of unknown function (DUF1002) D9C08_23110 PF00437 Type II/IV secretion system protein D9C08_23175 PF02810 SEC-C motif D9C08_23175 PF01043 SecA preprotein cross-linking domain D9C08_23175 PF07516 SecA Wing and Scaffold domain D9C08_23175 PF07517 SecA DEAD-like domain D9C08_23295 PF18801 response regulator aspartate phosphatase H, N terminal D9C08_23305 PF01076 Plasmid recombination enzyme D9C08_23325 PF18801 response regulator aspartate phosphatase H, N terminal D9C08_23325 PF13181 Tetratricopeptide repeat D9C08_23335 PF01446 Replication protein