RP72_00005 SM00382 ATPases associated with a variety of cellular activities RP72_00005 SM00760 Bacterial dnaA protein helix-turn-helix domain RP72_00010 SM00480 DNA polymerase III beta subunit RP72_00030 SM00387 Histidine kinase-like ATPases RP72_00030 SM00433 TopoisomeraseII RP72_00035 SM00434 DNA Topoisomerase IV RP72_00070 SM00116 Domain in cystathionine beta-synthase and other proteins. RP72_00070 SM01240 RP72_00070 RP72_00075 SM00936 Penicillin-binding protein 5, C-terminal domain RP72_00110 SM00257 Lysin motif RP72_00110 SM00636 RP72_00110 RP72_00125 SM00382 ATPases associated with a variety of cellular activities RP72_00135 SM00493 RP72_00135 RP72_00230 SM00465 GIY-YIG type nucleases (URI domain) RP72_00255 SM01208 RP72_00255 RP72_00260 SM00493 RP72_00260 RP72_00265 SM00650 Ribosomal RNA adenine dimethylases RP72_00315 SM01400 RP72_00315 RP72_00335 SM00487 DEAD-like helicases superfamily RP72_00335 SM00490 helicase superfamily c-terminal domain RP72_00335 SM00982 RP72_00335 RP72_00335 SM01058 CarD-like/TRCF domain RP72_00340 SM00966 SpoVT / AbrB like domain RP72_00355 SM00363 S4 RNA-binding domain RP72_00375 SM00316 Ribosomal protein S1-like RNA-binding domain RP72_00390 SM00331 Sigma factor PP2C-like phosphatases RP72_00390 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain RP72_00400 SM00220 Serine/Threonine protein kinases, catalytic domain RP72_00405 SM00977 TilS substrate C-terminal domain RP72_00415 SM00382 ATPases associated with a variety of cellular activities RP72_00460 SM00905 Dihydroneopterin aldolase RP72_00470 SM00530 Helix-turn-helix XRE-family like proteins RP72_00580 SM00382 ATPases associated with a variety of cellular activities RP72_00580 SM01086 C-terminal, D2-small domain, of ClpB protein RP72_00585 SM00382 ATPases associated with a variety of cellular activities RP72_00595 SM00670 Large family of predicted nucleotide-binding domains RP72_00625 SM00840 RP72_00625 RP72_00630 SM00535 Ribonuclease III family RP72_00635 SM00967 RNA 2'-O ribose methyltransferase substrate binding RP72_00660 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. RP72_00660 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. RP72_00665 SM00649 Ribosomal protein L11/L12 RP72_00695 SM00663 RNA polymerase I subunit A N-terminus RP72_00715 SM00838 Elongation factor G C-terminus RP72_00715 SM00889 Elongation factor G, domain IV RP72_00730 SM01403 RP72_00730 RP72_00750 SM01382 RP72_00750 RP72_00750 SM01383 RP72_00750 RP72_00765 SM00322 K homology RNA-binding domain RP72_00785 SM01374 RP72_00785 RP72_00790 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. RP72_00855 SM00316 Ribosomal protein S1-like RNA-binding domain RP72_00875 SM00662 RNA polymerases D RP72_00885 SM00382 ATPases associated with a variety of cellular activities RP72_00890 SM00382 ATPases associated with a variety of cellular activities RP72_00925 SM00646 RP72_00925 RP72_00940 SM01251 RP72_00940 RP72_01060 SM00342 helix_turn_helix, arabinose operon control protein RP72_01160 SM00478 endonuclease III RP72_01165 SM00342 helix_turn_helix, arabinose operon control protein RP72_01205 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor RP72_01225 SM00729 Elongator protein 3, MiaB family, Radical SAM RP72_01235 SM00382 ATPases associated with a variety of cellular activities RP72_01260 SM00448 cheY-homologous receiver domain RP72_01260 SM00862 Transcriptional regulatory protein, C terminal RP72_01265 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain RP72_01265 SM00388 His Kinase A (phosphoacceptor) domain RP72_01340 SM00347 helix_turn_helix multiple antibiotic resistance protein RP72_01370 SM00342 helix_turn_helix, arabinose operon control protein RP72_01420 SM00342 helix_turn_helix, arabinose operon control protein RP72_01425 SM00450 Rhodanese Homology Domain RP72_01445 SM00345 helix_turn_helix gluconate operon transcriptional repressor RP72_01445 SM00866 RP72_01445 RP72_01485 SM00387 Histidine kinase-like ATPases RP72_01490 SM00448 cheY-homologous receiver domain RP72_01495 SM01130 RP72_01495 RP72_01510 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain RP72_01515 SM00345 helix_turn_helix gluconate operon transcriptional repressor RP72_01515 SM00895 RP72_01515 RP72_01520 SM00858 RP72_01520 RP72_01540 SM00448 cheY-homologous receiver domain RP72_01540 SM00862 Transcriptional regulatory protein, C terminal RP72_01545 SM00387 Histidine kinase-like ATPases RP72_01545 SM00388 His Kinase A (phosphoacceptor) domain RP72_01550 SM00382 ATPases associated with a variety of cellular activities RP72_01575 SM00327 von Willebrand factor (vWF) type A domain RP72_01620 SM00870 RP72_01620 RP72_01640 SM00387 Histidine kinase-like ATPases RP72_01645 SM00448 cheY-homologous receiver domain RP72_01645 SM00850 LytTr DNA-binding domain RP72_01650 SM00382 ATPases associated with a variety of cellular activities RP72_01685 SM00028 Tetratricopeptide repeats RP72_01695 SM00642 Alpha-amylase domain RP72_01705 SM00382 ATPases associated with a variety of cellular activities RP72_01760 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor RP72_01765 SM00116 Domain in cystathionine beta-synthase and other proteins. RP72_01765 SM00382 ATPases associated with a variety of cellular activities RP72_01800 SM00632 RP72_01800 RP72_01800 SM00642 Alpha-amylase domain RP72_01820 SM00347 helix_turn_helix multiple antibiotic resistance protein RP72_01935 SM00926 Molybdopterin oxidoreductase Fe4S4 domain RP72_01965 SM00833 Cobalamin synthesis protein cobW C-terminal domain RP72_01975 SM00062 Bacterial periplasmic substrate-binding proteins RP72_02010 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). RP72_02010 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain RP72_02020 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family RP72_02035 SM00823 Phosphopantetheine attachment site RP72_02035 SM01294 RP72_02035 RP72_02040 SM00823 Phosphopantetheine attachment site RP72_02040 SM01294 RP72_02040 RP72_02045 SM00823 Phosphopantetheine attachment site RP72_02070 SM00345 helix_turn_helix gluconate operon transcriptional repressor RP72_02085 SM00382 ATPases associated with a variety of cellular activities RP72_02095 SM00062 Bacterial periplasmic substrate-binding proteins RP72_02135 SM00710 Parallel beta-helix repeats RP72_02135 SM00722 Domain present in carbohydrate binding proteins and sugar hydrolses RP72_02160 SM00382 ATPases associated with a variety of cellular activities RP72_02170 SM00448 cheY-homologous receiver domain RP72_02170 SM00862 Transcriptional regulatory protein, C terminal RP72_02175 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain RP72_02175 SM00387 Histidine kinase-like ATPases RP72_02175 SM00388 His Kinase A (phosphoacceptor) domain RP72_02180 SM00028 Tetratricopeptide repeats RP72_02215 SM00382 ATPases associated with a variety of cellular activities RP72_02245 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor RP72_02250 SM00345 helix_turn_helix gluconate operon transcriptional repressor RP72_02285 SM00420 helix_turn_helix, Deoxyribose operon repressor RP72_02310 SM01329 RP72_02310 RP72_02360 SM00796 Allophanate hydrolase subunit 1 RP72_02365 SM00797 Allophanate hydrolase subunit 2 RP72_02370 SM00346 helix_turn_helix isocitrate lyase regulation RP72_02445 SM00344 helix_turn_helix ASNC type RP72_02450 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain RP72_02450 SM00437 Bacterial DNA topoisomerase I DNA-binding domain RP72_02450 SM00493 RP72_02450 RP72_02460 SM00267 diguanylate cyclase RP72_02550 SM00091 PAS domain RP72_02550 SM00387 Histidine kinase-like ATPases RP72_02555 SM00448 cheY-homologous receiver domain RP72_02575 SM00382 ATPases associated with a variety of cellular activities RP72_02625 SM00487 DEAD-like helicases superfamily RP72_02625 SM00490 helicase superfamily c-terminal domain RP72_02655 SM01005 Alanine racemase, C-terminal domain RP72_02680 SM00387 Histidine kinase-like ATPases RP72_02685 SM00331 Sigma factor PP2C-like phosphatases RP72_02705 SM00331 Sigma factor PP2C-like phosphatases RP72_02705 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain RP72_02725 SM00347 helix_turn_helix multiple antibiotic resistance protein RP72_02730 SM00316 Ribosomal protein S1-like RNA-binding domain RP72_02730 SM00732 Likely ribonuclease with RNase H fold. RP72_02740 SM00731 SprT homologues. RP72_02785 SM00344 helix_turn_helix ASNC type RP72_02790 SM00344 helix_turn_helix ASNC type RP72_02830 SM00357 Cold shock protein domain RP72_02835 SM01058 CarD-like/TRCF domain RP72_02845 SM00342 helix_turn_helix, arabinose operon control protein RP72_02855 SM00342 helix_turn_helix, arabinose operon control protein RP72_02855 SM00871 Bacterial transcription activator, effector binding domain RP72_02860 SM00345 helix_turn_helix gluconate operon transcriptional repressor RP72_02890 SM00345 helix_turn_helix gluconate operon transcriptional repressor RP72_02940 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor RP72_02965 SM00345 helix_turn_helix gluconate operon transcriptional repressor RP72_02975 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor RP72_02995 SM00387 Histidine kinase-like ATPases RP72_03000 SM00421 helix_turn_helix, Lux Regulon RP72_03000 SM00448 cheY-homologous receiver domain RP72_03020 SM00422 helix_turn_helix, mercury resistance RP72_03020 SM00871 Bacterial transcription activator, effector binding domain RP72_03105 SM00382 ATPases associated with a variety of cellular activities RP72_03120 SM00347 helix_turn_helix multiple antibiotic resistance protein RP72_03135 SM00347 helix_turn_helix multiple antibiotic resistance protein RP72_03135 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor RP72_03150 SM00345 helix_turn_helix gluconate operon transcriptional repressor RP72_03150 SM00895 RP72_03150 RP72_03155 SM00257 Lysin motif RP72_03155 SM00636 RP72_03155 RP72_03170 SM00098 Alkaline phosphatase homologues RP72_03190 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. RP72_03225 SM00345 helix_turn_helix gluconate operon transcriptional repressor RP72_03225 SM00866 RP72_03225 RP72_03315 SM00382 ATPases associated with a variety of cellular activities RP72_03325 SM00881 CoA binding domain RP72_03350 SM00883 Chaperonin 10 Kd subunit RP72_03435 SM00028 Tetratricopeptide repeats RP72_03435 SM00382 ATPases associated with a variety of cellular activities RP72_03440 SM00829 Enoylreductase RP72_03485 SM00829 Enoylreductase RP72_03550 SM00460 Transglutaminase/protease-like homologues RP72_03585 SM01001 AIR carboxylase RP72_03595 SM00998 Adenylosuccinate lyase C-terminus RP72_03610 SM01211 RP72_03610 RP72_03635 SM00798 AICARFT/IMPCHase bienzyme RP72_03635 SM00851 MGS-like domain RP72_03640 SM01209 RP72_03640 RP72_03640 SM01210 RP72_03640 RP72_03645 SM00344 helix_turn_helix ASNC type RP72_03695 SM00278 Helix-hairpin-helix DNA-binding motif class 1 RP72_03695 SM00292 breast cancer carboxy-terminal domain RP72_03695 SM00532 Ligase N family RP72_03730 SM00845 GatB domain RP72_03745 SM00046 Diacylglycerol kinase catalytic domain (presumed) RP72_03770 SM00487 DEAD-like helicases superfamily RP72_03775 SM00974 RP72_03775 RP72_03805 SM00028 Tetratricopeptide repeats RP72_03870 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain RP72_03870 SM00387 Histidine kinase-like ATPases RP72_03875 SM00342 helix_turn_helix, arabinose operon control protein RP72_03875 SM00448 cheY-homologous receiver domain RP72_03900 SM00342 helix_turn_helix, arabinose operon control protein RP72_04005 SM00347 helix_turn_helix multiple antibiotic resistance protein RP72_04075 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). RP72_04080 SM00382 ATPases associated with a variety of cellular activities RP72_04090 SM00422 helix_turn_helix, mercury resistance RP72_04110 SM00382 ATPases associated with a variety of cellular activities RP72_04115 SM00487 DEAD-like helicases superfamily RP72_04115 SM00490 helicase superfamily c-terminal domain RP72_04125 SM00829 Enoylreductase RP72_04150 SM00382 ATPases associated with a variety of cellular activities RP72_04180 SM00656 RP72_04180 RP72_04190 SM00387 Histidine kinase-like ATPases RP72_04195 SM00448 cheY-homologous receiver domain RP72_04215 SM00849 Metallo-beta-lactamase superfamily RP72_04300 SM00642 Alpha-amylase domain RP72_04305 SM00345 helix_turn_helix gluconate operon transcriptional repressor RP72_04305 SM00866 RP72_04305 RP72_04335 SM00226 Low molecular weight phosphatase family RP72_04405 SM00478 endonuclease III RP72_04440 SM00861 Transketolase, pyrimidine binding domain RP72_04455 SM00382 ATPases associated with a variety of cellular activities RP72_04510 SM00382 ATPases associated with a variety of cellular activities RP72_04515 SM00382 ATPases associated with a variety of cellular activities RP72_04530 SM00342 helix_turn_helix, arabinose operon control protein RP72_04550 SM00387 Histidine kinase-like ATPases RP72_04555 SM00421 helix_turn_helix, Lux Regulon RP72_04555 SM00448 cheY-homologous receiver domain RP72_04560 SM00382 ATPases associated with a variety of cellular activities RP72_04610 SM00347 helix_turn_helix multiple antibiotic resistance protein RP72_04690 SM00287 Bacterial SH3 domain homologues RP72_04720 SM00478 endonuclease III RP72_04720 SM00525 RP72_04720 RP72_04750 SM00382 ATPases associated with a variety of cellular activities RP72_04920 SM01060 RP72_04920 RP72_04925 SM00382 ATPases associated with a variety of cellular activities RP72_04930 SM00062 Bacterial periplasmic substrate-binding proteins RP72_04960 SM00530 Helix-turn-helix XRE-family like proteins RP72_04975 SM00567 E-Z type HEAT repeats RP72_05005 SM00763 PrkA AAA domain RP72_05020 SM00347 helix_turn_helix multiple antibiotic resistance protein RP72_05050 SM00345 helix_turn_helix gluconate operon transcriptional repressor RP72_05055 SM00382 ATPases associated with a variety of cellular activities RP72_05060 SM00382 ATPases associated with a variety of cellular activities RP72_05070 SM00357 Cold shock protein domain RP72_05085 SM00267 diguanylate cyclase RP72_05115 SM00318 Staphylococcal nuclease homologues RP72_05125 SM00363 S4 RNA-binding domain RP72_05135 SM00116 Domain in cystathionine beta-synthase and other proteins. RP72_05180 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. RP72_05180 SM00387 Histidine kinase-like ATPases RP72_05185 SM00421 helix_turn_helix, Lux Regulon RP72_05185 SM00448 cheY-homologous receiver domain RP72_05205 SM00257 Lysin motif RP72_05225 SM00098 Alkaline phosphatase homologues RP72_05230 SM00257 Lysin motif RP72_05260 SM00345 helix_turn_helix gluconate operon transcriptional repressor RP72_05290 SM00563 Phosphate acyltransferases RP72_05295 SM01091 Transporter associated domain RP72_05300 SM00422 helix_turn_helix, mercury resistance RP72_05310 SM01091 Transporter associated domain RP72_05370 SM00382 ATPases associated with a variety of cellular activities RP72_05375 SM00382 ATPases associated with a variety of cellular activities RP72_05425 SM00729 Elongator protein 3, MiaB family, Radical SAM RP72_05455 SM00382 ATPases associated with a variety of cellular activities RP72_05475 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. RP72_05510 SM00347 helix_turn_helix multiple antibiotic resistance protein RP72_05540 SM00382 ATPases associated with a variety of cellular activities RP72_05625 SM01022 RP72_05625 RP72_05640 SM00849 Metallo-beta-lactamase superfamily RP72_05680 SM00829 Enoylreductase RP72_05690 SM00855 Phosphoglycerate mutase family RP72_05710 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). RP72_05725 SM00914 RP72_05725 RP72_05740 SM00894 Excalibur calcium-binding domain RP72_05775 SM00347 helix_turn_helix multiple antibiotic resistance protein RP72_05800 SM00354 helix_turn _helix lactose operon repressor RP72_05940 SM00342 helix_turn_helix, arabinose operon control protein RP72_05945 SM00354 helix_turn _helix lactose operon repressor RP72_05965 SM00345 helix_turn_helix gluconate operon transcriptional repressor RP72_06010 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain RP72_06040 SM00316 Ribosomal protein S1-like RNA-binding domain RP72_06050 SM00752 Horizontally Transferred TransMembrane Domain RP72_06135 SM00859 Semialdehyde dehydrogenase, NAD binding domain RP72_06155 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain RP72_06160 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain RP72_06210 SM00825 Beta-ketoacyl synthase RP72_06220 SM00382 ATPases associated with a variety of cellular activities RP72_06225 SM00382 ATPases associated with a variety of cellular activities RP72_06270 SM00382 ATPases associated with a variety of cellular activities RP72_06275 SM00382 ATPases associated with a variety of cellular activities RP72_06340 SM01118 RP72_06340 RP72_06350 SM00954 Region found in RelA / SpoT proteins RP72_06575 SM00635 Bacterial Ig-like domain 2 RP72_06670 SM00926 Molybdopterin oxidoreductase Fe4S4 domain RP72_06670 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region RP72_06720 SM00382 ATPases associated with a variety of cellular activities RP72_06730 SM00835 Cupin RP72_06760 SM00829 Enoylreductase RP72_06780 SM00354 helix_turn _helix lactose operon repressor RP72_06790 SM00858 RP72_06790 RP72_06805 SM00382 ATPases associated with a variety of cellular activities RP72_06810 SM00028 Tetratricopeptide repeats RP72_06825 SM00257 Lysin motif RP72_06825 SM00644 RP72_06825 RP72_06850 SM00530 Helix-turn-helix XRE-family like proteins RP72_06865 SM00382 ATPases associated with a variety of cellular activities RP72_06970 SM00257 Lysin motif RP72_07035 SM00257 Lysin motif RP72_07035 SM00644 RP72_07035 RP72_07085 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. RP72_07110 SM00382 ATPases associated with a variety of cellular activities RP72_07125 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain RP72_07135 SM00382 ATPases associated with a variety of cellular activities RP72_07195 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase RP72_07210 SM00347 helix_turn_helix multiple antibiotic resistance protein RP72_07250 SM00382 ATPases associated with a variety of cellular activities RP72_07265 SM00448 cheY-homologous receiver domain RP72_07265 SM00862 Transcriptional regulatory protein, C terminal RP72_07270 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain RP72_07270 SM00387 Histidine kinase-like ATPases RP72_07270 SM00388 His Kinase A (phosphoacceptor) domain RP72_07300 SM00116 Domain in cystathionine beta-synthase and other proteins. RP72_07300 SM00924 MgtE intracellular N domain RP72_07305 SM00422 helix_turn_helix, mercury resistance RP72_07320 SM00347 helix_turn_helix multiple antibiotic resistance protein RP72_07355 SM00559 Ku70 and Ku80 are 70kDa and 80kDa subunits of the Lupus Ku autoantigen RP72_07360 SM00052 Putative diguanylate phosphodiesterase RP72_07360 SM00267 diguanylate cyclase RP72_07420 SM00091 PAS domain RP72_07420 SM00387 Histidine kinase-like ATPases RP72_07420 SM00388 His Kinase A (phosphoacceptor) domain RP72_07465 SM01007 Class II Aldolase and Adducin N-terminal domain RP72_07490 SM00387 Histidine kinase-like ATPases RP72_07490 SM00388 His Kinase A (phosphoacceptor) domain RP72_07495 SM00347 helix_turn_helix multiple antibiotic resistance protein RP72_07510 SM00382 ATPases associated with a variety of cellular activities RP72_07510 SM01086 C-terminal, D2-small domain, of ClpB protein RP72_07545 SM00822 RP72_07545 RP72_07550 SM00257 Lysin motif RP72_07555 SM00257 Lysin motif RP72_07560 SM00636 RP72_07560 RP72_07625 SM00354 helix_turn _helix lactose operon repressor RP72_07630 SM01061 CAT RNA binding domain RP72_07665 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). RP72_07665 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain RP72_07685 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) RP72_07685 SM00091 PAS domain RP72_07685 SM00387 Histidine kinase-like ATPases RP72_07685 SM00388 His Kinase A (phosphoacceptor) domain RP72_07700 SM00260 Two component signalling adaptor domain RP72_07700 SM00448 cheY-homologous receiver domain RP72_07715 SM00257 Lysin motif RP72_07745 SM00052 Putative diguanylate phosphodiesterase RP72_07845 SM00852 Probable molybdopterin binding domain RP72_07865 SM00382 ATPases associated with a variety of cellular activities RP72_07870 SM00382 ATPases associated with a variety of cellular activities RP72_07885 SM00382 ATPases associated with a variety of cellular activities RP72_07890 SM01066 Carbohydrate binding domain RP72_07895 SM00420 helix_turn_helix, Deoxyribose operon repressor RP72_07895 SM01134 RP72_07895 RP72_07920 SM00382 ATPases associated with a variety of cellular activities RP72_07945 SM00966 SpoVT / AbrB like domain RP72_07950 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) RP72_07950 SM00091 PAS domain RP72_07950 SM00387 Histidine kinase-like ATPases RP72_07950 SM00388 His Kinase A (phosphoacceptor) domain RP72_07970 SM00849 Metallo-beta-lactamase superfamily RP72_08005 SM00861 Transketolase, pyrimidine binding domain RP72_08095 SM00838 Elongation factor G C-terminus RP72_08115 SM00670 Large family of predicted nucleotide-binding domains RP72_08140 SM00878 Biotin carboxylase C-terminal domain RP72_08185 SM00116 Domain in cystathionine beta-synthase and other proteins. RP72_08235 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. RP72_08295 SM00740 RP72_08295 RP72_08305 SM00740 RP72_08305 RP72_08370 SM00842 Cell division protein FtsA RP72_08375 SM00864 Tubulin/FtsZ family, GTPase domain RP72_08375 SM00865 Tubulin/FtsZ family, C-terminal domain RP72_08400 SM00382 ATPases associated with a variety of cellular activities RP72_08435 SM00363 S4 RNA-binding domain RP72_08460 SM00363 S4 RNA-binding domain RP72_08485 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain RP72_08490 SM00851 MGS-like domain RP72_08490 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain RP72_08490 SM01209 RP72_08490 RP72_08505 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family RP72_08560 SM00831 Cation transporter/ATPase, N-terminus RP72_08575 SM00072 Guanylate kinase homologues. RP72_08580 SM01409 RP72_08580 RP72_08590 SM00487 DEAD-like helicases superfamily RP72_08590 SM00490 helicase superfamily c-terminal domain RP72_08615 SM00331 Sigma factor PP2C-like phosphatases RP72_08615 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain RP72_08620 SM00220 Serine/Threonine protein kinases, catalytic domain RP72_08620 SM00740 RP72_08620 RP72_08635 SM00983 Thiamin pyrophosphokinase, vitamin B1 binding domain RP72_08655 SM01120 RP72_08655 RP72_08655 SM01121 RP72_08655 RP72_08670 SM00487 DEAD-like helicases superfamily RP72_08670 SM00490 helicase superfamily c-terminal domain RP72_08685 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. RP72_08690 SM00822 RP72_08690 RP72_08700 SM00358 Double-stranded RNA binding motif RP72_08700 SM00535 Ribonuclease III family RP72_08705 SM00968 SMC proteins Flexible Hinge Domain RP72_08710 SM00382 ATPases associated with a variety of cellular activities RP72_08710 SM00962 SRP54-type protein, GTPase domain RP72_08710 SM00963 SRP54-type protein, helical bundle domain RP72_08725 SM00382 ATPases associated with a variety of cellular activities RP72_08725 SM00962 SRP54-type protein, GTPase domain RP72_08725 SM00963 SRP54-type protein, helical bundle domain RP72_08785 SM00881 CoA binding domain RP72_08795 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain RP72_08795 SM00437 Bacterial DNA topoisomerase I DNA-binding domain RP72_08795 SM00493 RP72_08795 RP72_08815 SM00382 ATPases associated with a variety of cellular activities RP72_08815 SM01086 C-terminal, D2-small domain, of ClpB protein RP72_08855 SM00382 ATPases associated with a variety of cellular activities RP72_08905 SM00448 cheY-homologous receiver domain RP72_08940 SM00962 SRP54-type protein, GTPase domain RP72_08950 SM00448 cheY-homologous receiver domain RP72_08955 SM00073 Histidine Phosphotransfer domain RP72_08955 SM00260 Two component signalling adaptor domain RP72_08955 SM00387 Histidine kinase-like ATPases RP72_08955 SM01231 RP72_08955 RP72_08960 SM00260 Two component signalling adaptor domain RP72_09020 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. RP72_09030 SM00479 RP72_09030 RP72_09030 SM00481 DNA polymerase alpha chain like domain RP72_09040 SM00316 Ribosomal protein S1-like RNA-binding domain RP72_09040 SM00322 K homology RNA-binding domain RP72_09075 SM00904 Riboflavin kinase RP72_09080 SM01387 RP72_09080 RP72_09085 SM00316 Ribosomal protein S1-like RNA-binding domain RP72_09085 SM00322 K homology RNA-binding domain RP72_09120 SM00859 Semialdehyde dehydrogenase, NAD binding domain RP72_09130 SM01130 RP72_09130 RP72_09135 SM00849 Metallo-beta-lactamase superfamily RP72_09150 SM00382 ATPases associated with a variety of cellular activities RP72_09150 SM00843 RP72_09150 RP72_09155 SM00345 helix_turn_helix gluconate operon transcriptional repressor RP72_09155 SM00866 RP72_09155 RP72_09190 SM00530 Helix-turn-helix XRE-family like proteins RP72_09200 SM00852 Probable molybdopterin binding domain RP72_09205 SM00382 ATPases associated with a variety of cellular activities RP72_09215 SM00322 K homology RNA-binding domain RP72_09215 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. RP72_09230 SM00829 Enoylreductase RP72_09240 SM00729 Elongator protein 3, MiaB family, Radical SAM RP72_09255 SM00533 DNA-binding domain of DNA mismatch repair MUTS family RP72_09255 SM00534 ATPase domain of DNA mismatch repair MUTS family RP72_09260 SM00853 MutL C terminal dimerisation domain RP72_09260 SM01340 RP72_09260 RP72_09285 SM00849 Metallo-beta-lactamase superfamily RP72_09295 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. RP72_09300 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. RP72_09305 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. RP72_09315 SM00825 Beta-ketoacyl synthase RP72_09335 SM00822 RP72_09335 RP72_09335 SM00823 Phosphopantetheine attachment site RP72_09335 SM00825 Beta-ketoacyl synthase RP72_09335 SM00826 RP72_09335 RP72_09335 SM01294 RP72_09335 RP72_09340 SM00822 RP72_09340 RP72_09340 SM00823 Phosphopantetheine attachment site RP72_09340 SM00825 Beta-ketoacyl synthase RP72_09340 SM00826 RP72_09340 RP72_09340 SM01294 RP72_09340 RP72_09345 SM00822 RP72_09345 RP72_09345 SM00823 Phosphopantetheine attachment site RP72_09345 SM00825 Beta-ketoacyl synthase RP72_09345 SM00826 RP72_09345 RP72_09345 SM01294 RP72_09345 RP72_09350 SM00822 RP72_09350 RP72_09350 SM00823 Phosphopantetheine attachment site RP72_09350 SM00825 Beta-ketoacyl synthase RP72_09350 SM00826 RP72_09350 RP72_09350 SM01294 RP72_09350 RP72_09355 SM00823 Phosphopantetheine attachment site RP72_09355 SM00825 Beta-ketoacyl synthase RP72_09355 SM01294 RP72_09355 RP72_09370 SM00849 Metallo-beta-lactamase superfamily RP72_09455 SM00646 RP72_09455 RP72_09460 SM00382 ATPases associated with a variety of cellular activities RP72_09480 SM00422 helix_turn_helix, mercury resistance RP72_09485 SM01230 RP72_09485 RP72_09505 SM00860 SMI1 / KNR4 family RP72_09570 SM00318 Staphylococcal nuclease homologues RP72_09580 SM01005 Alanine racemase, C-terminal domain RP72_09715 SM00257 Lysin motif RP72_09720 SM00857 Resolvase, N terminal domain RP72_09730 SM00861 Transketolase, pyrimidine binding domain RP72_09755 SM00448 cheY-homologous receiver domain RP72_09825 SM01207 RP72_09825 RP72_09830 SM00881 CoA binding domain RP72_09835 SM00387 Histidine kinase-like ATPases RP72_09835 SM00433 TopoisomeraseII RP72_09840 SM00434 DNA Topoisomerase IV RP72_09860 SM01067 Cellulose binding domain RP72_09875 SM00606 Cellulose Binding Domain Type IV RP72_09925 SM00878 Biotin carboxylase C-terminal domain RP72_09960 SM00823 Phosphopantetheine attachment site RP72_09960 SM00824 Thioesterase RP72_09965 SM00823 Phosphopantetheine attachment site RP72_09970 SM00823 Phosphopantetheine attachment site RP72_09970 SM01294 RP72_09970 RP72_09975 SM00823 Phosphopantetheine attachment site RP72_09980 SM00823 Phosphopantetheine attachment site RP72_10030 SM00829 Enoylreductase RP72_10050 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase RP72_10065 SM00822 RP72_10065 RP72_10100 SM00926 Molybdopterin oxidoreductase Fe4S4 domain RP72_10125 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). RP72_10125 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain RP72_10145 SM00656 RP72_10145 RP72_10160 SM00835 Cupin RP72_10195 SM00530 Helix-turn-helix XRE-family like proteins RP72_10260 SM00530 Helix-turn-helix XRE-family like proteins RP72_10355 SM00860 SMI1 / KNR4 family RP72_10365 SM00860 SMI1 / KNR4 family RP72_10375 SM00710 Parallel beta-helix repeats RP72_10385 SM00342 helix_turn_helix, arabinose operon control protein RP72_10400 SM00849 Metallo-beta-lactamase superfamily RP72_10405 SM00871 Bacterial transcription activator, effector binding domain RP72_10420 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor RP72_10460 SM00421 helix_turn_helix, Lux Regulon RP72_10460 SM00448 cheY-homologous receiver domain RP72_10465 SM00257 Lysin motif RP72_10470 SM00341 Helicase and RNase D C-terminal RP72_10470 SM00487 DEAD-like helicases superfamily RP72_10470 SM00490 helicase superfamily c-terminal domain RP72_10470 SM00956 RP72_10470 RP72_10555 SM00861 Transketolase, pyrimidine binding domain RP72_10560 SM00327 von Willebrand factor (vWF) type A domain RP72_10565 SM00382 ATPases associated with a variety of cellular activities RP72_10575 SM00257 Lysin motif RP72_10670 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. RP72_10670 SM00245 tail specific protease RP72_10705 SM00014 Acid phosphatase homologues RP72_10755 SM00882 Coenzyme A transferase RP72_10760 SM00882 Coenzyme A transferase RP72_10825 SM00530 Helix-turn-helix XRE-family like proteins RP72_10905 SM00871 Bacterial transcription activator, effector binding domain RP72_10925 SM00507 HNH nucleases RP72_11085 SM00481 DNA polymerase alpha chain like domain RP72_11140 SM00710 Parallel beta-helix repeats RP72_11215 SM00507 HNH nucleases RP72_11305 SM00530 Helix-turn-helix XRE-family like proteins RP72_11325 SM00530 Helix-turn-helix XRE-family like proteins RP72_11430 SM00530 Helix-turn-helix XRE-family like proteins RP72_11445 SM00411 bacterial (prokaryotic) histone like domain RP72_11640 SM00644 RP72_11640 RP72_11670 SM00382 ATPases associated with a variety of cellular activities RP72_11720 SM00860 SMI1 / KNR4 family RP72_11725 SM00860 SMI1 / KNR4 family RP72_11735 SM00860 SMI1 / KNR4 family RP72_11745 SM00318 Staphylococcal nuclease homologues RP72_11745 SM00894 Excalibur calcium-binding domain RP72_11780 SM00857 Resolvase, N terminal domain RP72_11800 SM00347 helix_turn_helix multiple antibiotic resistance protein RP72_11845 SM00382 ATPases associated with a variety of cellular activities RP72_11895 SM00567 E-Z type HEAT repeats RP72_11895 SM00932 Scaffold protein Nfu/NifU N terminal RP72_11900 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. RP72_11920 SM00357 Cold shock protein domain RP72_11960 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs RP72_11960 SM00475 5'-3' exonuclease RP72_12025 SM00354 helix_turn _helix lactose operon repressor RP72_12040 SM00491 RP72_12040 RP72_12050 SM00981 RP72_12050 RP72_12075 SM00487 DEAD-like helicases superfamily RP72_12075 SM00490 helicase superfamily c-terminal domain RP72_12135 SM00478 endonuclease III RP72_12135 SM00525 RP72_12135 RP72_12165 SM00479 RP72_12165 RP72_12165 SM00487 DEAD-like helicases superfamily RP72_12165 SM00491 RP72_12165 RP72_12205 SM00851 MGS-like domain RP72_12255 SM00914 RP72_12255 RP72_12260 SM00028 Tetratricopeptide repeats RP72_12325 SM00138 Methyltransferase, chemotaxis proteins RP72_12335 SM00562 RP72_12335 RP72_12365 SM00411 bacterial (prokaryotic) histone like domain RP72_12415 SM01240 RP72_12415 RP72_12420 SM00316 Ribosomal protein S1-like RNA-binding domain RP72_12460 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase RP72_12480 SM00257 Lysin motif RP72_12490 SM00487 DEAD-like helicases superfamily RP72_12490 SM00490 helicase superfamily c-terminal domain RP72_12535 SM00091 PAS domain RP72_12535 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain RP72_12535 SM00387 Histidine kinase-like ATPases RP72_12535 SM00388 His Kinase A (phosphoacceptor) domain RP72_12540 SM00448 cheY-homologous receiver domain RP72_12540 SM00862 Transcriptional regulatory protein, C terminal RP72_12560 SM00363 S4 RNA-binding domain RP72_12575 SM00936 Penicillin-binding protein 5, C-terminal domain RP72_12715 SM00387 Histidine kinase-like ATPases RP72_12725 SM00936 Penicillin-binding protein 5, C-terminal domain RP72_12765 SM00919 Malic enzyme, NAD binding domain RP72_12765 SM01274 RP72_12765 RP72_12780 SM00870 RP72_12780 RP72_12785 SM00530 Helix-turn-helix XRE-family like proteins RP72_12890 SM00849 Metallo-beta-lactamase superfamily RP72_12915 SM00849 Metallo-beta-lactamase superfamily RP72_12925 SM01350 RP72_12925 RP72_12980 SM00382 ATPases associated with a variety of cellular activities RP72_12990 SM00062 Bacterial periplasmic substrate-binding proteins RP72_12990 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. RP72_13000 SM00046 Diacylglycerol kinase catalytic domain (presumed) RP72_13010 SM00422 helix_turn_helix, mercury resistance RP72_13020 SM00861 Transketolase, pyrimidine binding domain RP72_13040 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase RP72_13050 SM00091 PAS domain RP72_13050 SM00382 ATPases associated with a variety of cellular activities RP72_13095 SM00646 RP72_13095 RP72_13130 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. RP72_13145 SM00363 S4 RNA-binding domain RP72_13150 SM00861 Transketolase, pyrimidine binding domain RP72_13185 SM00878 Biotin carboxylase C-terminal domain RP72_13230 SM00382 ATPases associated with a variety of cellular activities RP72_13240 SM00841 Elongation factor P, C-terminal RP72_13240 SM01185 RP72_13240 RP72_13275 SM00529 Helix-turn-helix diphteria tox regulatory element RP72_13285 SM00450 Rhodanese Homology Domain RP72_13305 SM00487 DEAD-like helicases superfamily RP72_13305 SM00490 helicase superfamily c-terminal domain RP72_13320 SM00530 Helix-turn-helix XRE-family like proteins RP72_13380 SM00382 ATPases associated with a variety of cellular activities RP72_13395 SM01091 Transporter associated domain RP72_13420 SM00849 Metallo-beta-lactamase superfamily RP72_13440 SM00631 RP72_13440 RP72_13460 SM00028 Tetratricopeptide repeats RP72_13500 SM00382 ATPases associated with a variety of cellular activities RP72_13505 SM00382 ATPases associated with a variety of cellular activities RP72_13555 SM00257 Lysin motif RP72_13590 SM00518 AP endonuclease family 2 RP72_13595 SM00487 DEAD-like helicases superfamily RP72_13595 SM00490 helicase superfamily c-terminal domain RP72_13630 SM00400 zinc finger RP72_13630 SM00493 RP72_13630 RP72_13645 SM00116 Domain in cystathionine beta-synthase and other proteins. RP72_13690 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. RP72_13745 SM00729 Elongator protein 3, MiaB family, Radical SAM RP72_13760 SM00271 DnaJ molecular chaperone homology domain RP72_13780 SM00729 Elongator protein 3, MiaB family, Radical SAM RP72_13785 SM00838 Elongation factor G C-terminus RP72_13820 SM00849 Metallo-beta-lactamase superfamily RP72_13830 SM00278 Helix-hairpin-helix DNA-binding motif class 1 RP72_13850 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. RP72_13860 SM01103 RP72_13860 RP72_13895 SM00644 RP72_13895 RP72_13905 SM01350 RP72_13905 RP72_13925 SM00857 Resolvase, N terminal domain RP72_13930 SM00226 Low molecular weight phosphatase family RP72_13945 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor RP72_13955 SM00028 Tetratricopeptide repeats RP72_13995 SM00644 RP72_13995 RP72_14055 SM00257 Lysin motif RP72_14190 SM00382 ATPases associated with a variety of cellular activities RP72_14220 SM00530 Helix-turn-helix XRE-family like proteins RP72_14230 SM00530 Helix-turn-helix XRE-family like proteins RP72_14235 SM00530 Helix-turn-helix XRE-family like proteins RP72_14270 SM00388 His Kinase A (phosphoacceptor) domain RP72_14275 SM00448 cheY-homologous receiver domain RP72_14275 SM00862 Transcriptional regulatory protein, C terminal RP72_14315 SM00450 Rhodanese Homology Domain RP72_14315 SM00849 Metallo-beta-lactamase superfamily RP72_14325 SM00450 Rhodanese Homology Domain RP72_14355 SM00422 helix_turn_helix, mercury resistance RP72_14370 SM01091 Transporter associated domain RP72_14430 SM00344 helix_turn_helix ASNC type RP72_14535 SM00287 Bacterial SH3 domain homologues RP72_14575 SM00422 helix_turn_helix, mercury resistance RP72_14585 SM00829 Enoylreductase RP72_14595 SM00640 Glycosyl hydrolases family 32 RP72_14620 SM00382 ATPases associated with a variety of cellular activities RP72_14690 SM00926 Molybdopterin oxidoreductase Fe4S4 domain RP72_14690 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region RP72_14720 SM00650 Ribosomal RNA adenine dimethylases RP72_14775 SM00732 Likely ribonuclease with RNase H fold. RP72_14785 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain RP72_14795 SM00382 ATPases associated with a variety of cellular activities RP72_14800 SM00062 Bacterial periplasmic substrate-binding proteins RP72_14800 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. RP72_14830 SM00382 ATPases associated with a variety of cellular activities RP72_14835 SM00028 Tetratricopeptide repeats RP72_14855 SM00382 ATPases associated with a variety of cellular activities RP72_14885 SM00287 Bacterial SH3 domain homologues RP72_14885 SM00646 RP72_14885 RP72_14895 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. RP72_14895 SM00954 Region found in RelA / SpoT proteins RP72_14945 SM01323 RP72_14945 RP72_14965 SM00382 ATPases associated with a variety of cellular activities RP72_14970 SM00278 Helix-hairpin-helix DNA-binding motif class 1 RP72_15025 SM00257 Lysin motif RP72_15070 SM01317 RP72_15070 RP72_15170 SM00257 Lysin motif RP72_15180 SM01004 Delta-aminolevulinic acid dehydratase RP72_15215 SM00382 ATPases associated with a variety of cellular activities RP72_15215 SM00464 Found in ATP-dependent protease La (LON) RP72_15220 SM00382 ATPases associated with a variety of cellular activities RP72_15225 SM00382 ATPases associated with a variety of cellular activities RP72_15225 SM00994 ClpX C4-type zinc finger RP72_15225 SM01086 C-terminal, D2-small domain, of ClpB protein RP72_15250 SM01329 RP72_15250 RP72_15255 SM00917 LeuA allosteric (dimerisation) domain RP72_15315 SM00909 Sporulation and spore germination RP72_15325 SM00347 helix_turn_helix multiple antibiotic resistance protein RP72_15330 SM00421 helix_turn_helix, Lux Regulon RP72_15370 SM00465 GIY-YIG type nucleases (URI domain) RP72_15380 SM00813 Alpha-L-arabinofuranosidase C-terminus RP72_15385 SM00893 Electron transfer flavoprotein domain RP72_15390 SM00893 Electron transfer flavoprotein domain RP72_15415 SM00463 Small MutS-related domain RP72_15415 SM00533 DNA-binding domain of DNA mismatch repair MUTS family RP72_15415 SM00534 ATPase domain of DNA mismatch repair MUTS family RP72_15420 SM00278 Helix-hairpin-helix DNA-binding motif class 1 RP72_15420 SM00481 DNA polymerase alpha chain like domain RP72_15420 SM00483 DNA polymerase X family RP72_15440 SM00873 B3/4 domain RP72_15440 SM00874 tRNA synthetase B5 domain RP72_15440 SM00896 Ferredoxin-fold anticodon binding domain RP72_15455 SM00967 RNA 2'-O ribose methyltransferase substrate binding RP72_15495 SM00813 Alpha-L-arabinofuranosidase C-terminus RP72_15525 SM01007 Class II Aldolase and Adducin N-terminal domain RP72_15590 SM00448 cheY-homologous receiver domain RP72_15590 SM00850 LytTr DNA-binding domain RP72_15595 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. RP72_15595 SM00387 Histidine kinase-like ATPases RP72_15605 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain RP72_15620 SM00382 ATPases associated with a variety of cellular activities RP72_15640 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain RP72_15675 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain RP72_15675 SM01232 RP72_15675 RP72_15680 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs RP72_15680 SM00474 3'-5' exonuclease RP72_15680 SM00475 5'-3' exonuclease RP72_15680 SM00482 DNA polymerase A domain RP72_15685 SM00091 PAS domain RP72_15685 SM00387 Histidine kinase-like ATPases RP72_15685 SM00388 His Kinase A (phosphoacceptor) domain RP72_15690 SM00448 cheY-homologous receiver domain RP72_15690 SM00862 Transcriptional regulatory protein, C terminal RP72_15700 SM01329 RP72_15700 RP72_15745 SM00919 Malic enzyme, NAD binding domain RP72_15745 SM01274 RP72_15745 RP72_15750 SM00481 DNA polymerase alpha chain like domain RP72_15780 SM00116 Domain in cystathionine beta-synthase and other proteins. RP72_15800 SM00904 Riboflavin kinase RP72_15820 SM00382 ATPases associated with a variety of cellular activities RP72_15835 SM00062 Bacterial periplasmic substrate-binding proteins RP72_15840 SM00062 Bacterial periplasmic substrate-binding proteins RP72_15855 SM00849 Metallo-beta-lactamase superfamily RP72_15880 SM00852 Probable molybdopterin binding domain RP72_15940 SM00981 RP72_15940 RP72_15970 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. RP72_15975 SM00267 diguanylate cyclase RP72_15980 SM00363 S4 RNA-binding domain RP72_15980 SM01390 RP72_15980 RP72_15990 SM00363 S4 RNA-binding domain RP72_16005 SM00116 Domain in cystathionine beta-synthase and other proteins. RP72_16025 SM00354 helix_turn _helix lactose operon repressor RP72_16030 SM00830 Chorismate mutase type II RP72_16055 SM00382 ATPases associated with a variety of cellular activities RP72_16055 SM00843 RP72_16055 RP72_16090 SM00919 Malic enzyme, NAD binding domain RP72_16090 SM01274 RP72_16090 RP72_16095 SM00849 Metallo-beta-lactamase superfamily RP72_16115 SM00642 Alpha-amylase domain RP72_16120 SM00046 Diacylglycerol kinase catalytic domain (presumed) RP72_16155 SM00382 ATPases associated with a variety of cellular activities RP72_16160 SM00420 helix_turn_helix, Deoxyribose operon repressor RP72_16165 SM00363 S4 RNA-binding domain RP72_16215 SM00342 helix_turn_helix, arabinose operon control protein RP72_16240 SM00729 Elongator protein 3, MiaB family, Radical SAM RP72_16240 SM00876 Biotin and Thiamin Synthesis associated domain RP72_16270 SM00354 helix_turn _helix lactose operon repressor RP72_16295 SM00450 Rhodanese Homology Domain RP72_16310 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) RP72_16310 SM00091 PAS domain RP72_16330 SM00382 ATPases associated with a variety of cellular activities RP72_16335 SM00387 Histidine kinase-like ATPases RP72_16340 SM00448 cheY-homologous receiver domain RP72_16340 SM00862 Transcriptional regulatory protein, C terminal RP72_16350 SM00382 ATPases associated with a variety of cellular activities RP72_16365 SM00382 ATPases associated with a variety of cellular activities RP72_16370 SM00345 helix_turn_helix gluconate operon transcriptional repressor RP72_16385 SM00729 Elongator protein 3, MiaB family, Radical SAM RP72_16445 SM00382 ATPases associated with a variety of cellular activities RP72_16485 SM01234 RP72_16485 RP72_16490 SM00947 Carbonic anhydrase RP72_16525 SM00382 ATPases associated with a variety of cellular activities RP72_16535 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain RP72_16575 SM00984 UDP binding domain RP72_16635 SM00642 Alpha-amylase domain RP72_16775 SM00244 prohibitin homologues RP72_16830 SM00047 Lysozyme subfamily 2 RP72_16880 SM00420 helix_turn_helix, Deoxyribose operon repressor RP72_16880 SM01134 RP72_16880 RP72_16885 SM01007 Class II Aldolase and Adducin N-terminal domain RP72_16890 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). RP72_16890 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain RP72_16890 SM00319 Homologues of the ligand binding domain of Tar RP72_16895 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). RP72_16895 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain RP72_16895 SM00319 Homologues of the ligand binding domain of Tar RP72_16900 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). RP72_16900 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain RP72_16900 SM00319 Homologues of the ligand binding domain of Tar RP72_16905 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). RP72_16905 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain RP72_16905 SM00319 Homologues of the ligand binding domain of Tar RP72_16925 SM00642 Alpha-amylase domain RP72_16930 SM01091 Transporter associated domain RP72_16985 SM00316 Ribosomal protein S1-like RNA-binding domain RP72_16995 SM00344 helix_turn_helix ASNC type RP72_17015 SM00387 Histidine kinase-like ATPases RP72_17015 SM00388 His Kinase A (phosphoacceptor) domain RP72_17020 SM01298 RP72_17020 RP72_17025 SM00479 RP72_17025 RP72_17055 SM00091 PAS domain RP72_17055 SM00387 Histidine kinase-like ATPases RP72_17060 SM00448 cheY-homologous receiver domain RP72_17070 SM00382 ATPases associated with a variety of cellular activities RP72_17135 SM00421 helix_turn_helix, Lux Regulon RP72_17135 SM00448 cheY-homologous receiver domain RP72_17140 SM00387 Histidine kinase-like ATPases RP72_17165 SM00052 Putative diguanylate phosphodiesterase RP72_17210 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. RP72_17255 SM01002 Alanine dehydrogenase/PNT, C-terminal domain RP72_17255 SM01003 Alanine dehydrogenase/PNT, N-terminal domain RP72_17265 SM00923 MbtH-like protein RP72_17270 SM00823 Phosphopantetheine attachment site RP72_17270 SM00824 Thioesterase RP72_17355 SM01240 RP72_17355 RP72_17455 SM00729 Elongator protein 3, MiaB family, Radical SAM RP72_17535 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain RP72_17575 SM00382 ATPases associated with a variety of cellular activities RP72_17580 SM00345 helix_turn_helix gluconate operon transcriptional repressor RP72_17580 SM00866 RP72_17580 RP72_17610 SM00465 GIY-YIG type nucleases (URI domain) RP72_17635 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor RP72_17660 SM00382 ATPases associated with a variety of cellular activities RP72_17685 SM00382 ATPases associated with a variety of cellular activities RP72_17685 SM00930 RP72_17685 RP72_17700 SM00493 RP72_17700 RP72_17755 SM00347 helix_turn_helix multiple antibiotic resistance protein RP72_17790 SM00382 ATPases associated with a variety of cellular activities RP72_17820 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. RP72_17825 SM00448 cheY-homologous receiver domain RP72_17825 SM00862 Transcriptional regulatory protein, C terminal RP72_17830 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain RP72_17830 SM00387 Histidine kinase-like ATPases RP72_17830 SM00388 His Kinase A (phosphoacceptor) domain RP72_17870 SM00421 helix_turn_helix, Lux Regulon RP72_17870 SM00448 cheY-homologous receiver domain RP72_17875 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain RP72_17875 SM00387 Histidine kinase-like ATPases RP72_17910 SM00382 ATPases associated with a variety of cellular activities RP72_17940 SM00387 Histidine kinase-like ATPases RP72_17940 SM00388 His Kinase A (phosphoacceptor) domain RP72_17945 SM00448 cheY-homologous receiver domain RP72_17945 SM00862 Transcriptional regulatory protein, C terminal RP72_17965 SM00835 Cupin RP72_17980 SM00382 ATPases associated with a variety of cellular activities RP72_17990 SM00382 ATPases associated with a variety of cellular activities RP72_18155 SM00316 Ribosomal protein S1-like RNA-binding domain RP72_18155 SM00357 Cold shock protein domain RP72_18155 SM00955 RP72_18155 RP72_18175 SM00530 Helix-turn-helix XRE-family like proteins RP72_18180 SM00530 Helix-turn-helix XRE-family like proteins RP72_18185 SM00530 Helix-turn-helix XRE-family like proteins RP72_18195 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). RP72_18195 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain RP72_18215 SM00116 Domain in cystathionine beta-synthase and other proteins. RP72_18215 SM00382 ATPases associated with a variety of cellular activities RP72_18230 SM00752 Horizontally Transferred TransMembrane Domain RP72_18245 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor RP72_18265 SM00116 Domain in cystathionine beta-synthase and other proteins. RP72_18265 SM00382 ATPases associated with a variety of cellular activities RP72_18300 SM01192 RP72_18300 RP72_18300 SM01193 RP72_18300 RP72_18325 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain RP72_18340 SM00345 helix_turn_helix gluconate operon transcriptional repressor RP72_18365 SM00636 RP72_18365 RP72_18385 SM00421 helix_turn_helix, Lux Regulon RP72_18385 SM00448 cheY-homologous receiver domain RP72_18400 SM00382 ATPases associated with a variety of cellular activities RP72_18410 SM00331 Sigma factor PP2C-like phosphatases RP72_18440 SM00354 helix_turn _helix lactose operon repressor RP72_18445 SM00345 helix_turn_helix gluconate operon transcriptional repressor RP72_18445 SM00895 RP72_18445 RP72_18540 SM00530 Helix-turn-helix XRE-family like proteins RP72_18580 SM00640 Glycosyl hydrolases family 32 RP72_18635 SM00642 Alpha-amylase domain RP72_18665 SM00642 Alpha-amylase domain RP72_18670 SM00354 helix_turn _helix lactose operon repressor RP72_18690 SM00947 Carbonic anhydrase RP72_18705 SM00382 ATPases associated with a variety of cellular activities RP72_18710 SM00387 Histidine kinase-like ATPases RP72_18715 SM00448 cheY-homologous receiver domain RP72_18715 SM00862 Transcriptional regulatory protein, C terminal RP72_18765 SM00028 Tetratricopeptide repeats RP72_18770 SM00382 ATPases associated with a variety of cellular activities RP72_18875 SM00345 helix_turn_helix gluconate operon transcriptional repressor RP72_18875 SM00866 RP72_18875 RP72_18885 SM00347 helix_turn_helix multiple antibiotic resistance protein RP72_18900 SM00347 helix_turn_helix multiple antibiotic resistance protein RP72_18940 SM00382 ATPases associated with a variety of cellular activities RP72_18945 SM00487 DEAD-like helicases superfamily RP72_18945 SM00490 helicase superfamily c-terminal domain RP72_18970 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. RP72_18980 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. RP72_18980 SM00245 tail specific protease RP72_18990 SM00382 ATPases associated with a variety of cellular activities RP72_19005 SM00937 RP72_19005 RP72_19010 SM00957 SecA DEAD-like domain RP72_19010 SM00958 SecA preprotein cross-linking domain RP72_19100 SM00487 DEAD-like helicases superfamily RP72_19100 SM00490 helicase superfamily c-terminal domain RP72_19110 SM00421 helix_turn_helix, Lux Regulon RP72_19110 SM00448 cheY-homologous receiver domain RP72_19115 SM00387 Histidine kinase-like ATPases RP72_19155 SM00984 UDP binding domain RP72_19180 SM00646 RP72_19180 RP72_19230 SM00382 ATPases associated with a variety of cellular activities RP72_19270 SM00047 Lysozyme subfamily 2 RP72_19270 SM00287 Bacterial SH3 domain homologues RP72_19325 SM00854 Bacterial capsule synthesis protein PGA_cap RP72_19340 SM00354 helix_turn _helix lactose operon repressor RP72_19355 SM00382 ATPases associated with a variety of cellular activities RP72_19370 SM00287 Bacterial SH3 domain homologues RP72_19425 SM00903 Flavin reductase like domain RP72_19440 SM00344 helix_turn_helix ASNC type RP72_19500 SM00984 UDP binding domain RP72_19530 SM00487 DEAD-like helicases superfamily RP72_19530 SM00490 helicase superfamily c-terminal domain RP72_19540 SM00420 helix_turn_helix, Deoxyribose operon repressor RP72_19540 SM01134 RP72_19540 RP72_19565 SM00387 Histidine kinase-like ATPases RP72_19580 SM00028 Tetratricopeptide repeats RP72_19605 SM00347 helix_turn_helix multiple antibiotic resistance protein RP72_19615 SM00710 Parallel beta-helix repeats RP72_19615 SM00722 Domain present in carbohydrate binding proteins and sugar hydrolses RP72_19645 SM00938 Nitrogen regulatory protein P-II RP72_19650 SM00014 Acid phosphatase homologues RP72_19685 SM00155 Phospholipase D. Active site motifs. RP72_19690 SM00422 helix_turn_helix, mercury resistance RP72_19740 SM00028 Tetratricopeptide repeats RP72_19745 SM00729 Elongator protein 3, MiaB family, Radical SAM RP72_19760 SM00327 von Willebrand factor (vWF) type A domain RP72_19770 SM00327 von Willebrand factor (vWF) type A domain RP72_19805 SM00382 ATPases associated with a variety of cellular activities RP72_19870 SM00226 Low molecular weight phosphatase family RP72_19910 SM00937 RP72_19910 RP72_19930 SM00919 Malic enzyme, NAD binding domain RP72_19930 SM01274 RP72_19930 RP72_19945 SM00357 Cold shock protein domain RP72_19945 SM00382 ATPases associated with a variety of cellular activities RP72_19945 SM00959 Rho termination factor, N-terminal domain RP72_19975 SM00448 cheY-homologous receiver domain RP72_20005 SM00155 Phospholipase D. Active site motifs. RP72_20025 SM00382 ATPases associated with a variety of cellular activities RP72_20030 SM00155 Phospholipase D. Active site motifs. RP72_20050 SM00926 Molybdopterin oxidoreductase Fe4S4 domain RP72_20065 SM00100 Cyclic nucleotide-monophosphate binding domain RP72_20065 SM00419 helix_turn_helix, cAMP Regulatory protein RP72_20075 SM00836 DALR anticodon binding domain RP72_20075 SM01016 Arginyl tRNA synthetase N terminal dom RP72_20090 SM00729 Elongator protein 3, MiaB family, Radical SAM RP72_20140 SM00028 Tetratricopeptide repeats RP72_20185 SM00347 helix_turn_helix multiple antibiotic resistance protein RP72_20190 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain RP72_20215 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. RP72_20310 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase RP72_20350 SM00858 RP72_20350 RP72_20405 SM00986 Uracil DNA glycosylase superfamily RP72_20405 SM00987 UreE urease accessory protein, C-terminal domain RP72_20440 SM00640 Glycosyl hydrolases family 32 RP72_20455 SM01061 CAT RNA binding domain RP72_20605 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase RP72_20635 SM01061 CAT RNA binding domain RP72_20650 SM00347 helix_turn_helix multiple antibiotic resistance protein RP72_20655 SM00363 S4 RNA-binding domain RP72_20665 SM00954 Region found in RelA / SpoT proteins RP72_20750 SM01060 RP72_20750 RP72_20765 SM00382 ATPases associated with a variety of cellular activities RP72_20800 SM00382 ATPases associated with a variety of cellular activities RP72_20805 SM00382 ATPases associated with a variety of cellular activities RP72_20840 SM00382 ATPases associated with a variety of cellular activities RP72_20890 SM00421 helix_turn_helix, Lux Regulon RP72_20890 SM00448 cheY-homologous receiver domain RP72_20925 SM00822 RP72_20925 RP72_20930 SM00882 Coenzyme A transferase RP72_20935 SM00882 Coenzyme A transferase RP72_20975 SM01060 RP72_20975 RP72_20990 SM01061 CAT RNA binding domain RP72_21005 SM00487 DEAD-like helicases superfamily RP72_21005 SM00490 helicase superfamily c-terminal domain RP72_21095 SM00860 SMI1 / KNR4 family RP72_21155 SM00941 Pyrimidine nucleoside phosphorylase C-terminal domain RP72_21165 SM01133 RP72_21165 RP72_21195 SM00382 ATPases associated with a variety of cellular activities RP72_21205 SM00062 Bacterial periplasmic substrate-binding proteins RP72_21275 SM00382 ATPases associated with a variety of cellular activities RP72_21280 SM00387 Histidine kinase-like ATPases RP72_21285 SM00448 cheY-homologous receiver domain RP72_21285 SM00862 Transcriptional regulatory protein, C terminal RP72_21340 SM00420 helix_turn_helix, Deoxyribose operon repressor RP72_21340 SM01134 RP72_21340 RP72_21365 SM00387 Histidine kinase-like ATPases RP72_21395 SM00558 A domain family that is part of the cupin metalloenzyme superfamily. RP72_21425 SM00564 beta-propeller repeat RP72_21460 SM00347 helix_turn_helix multiple antibiotic resistance protein RP72_21485 SM00345 helix_turn_helix gluconate operon transcriptional repressor RP72_21485 SM00895 RP72_21485 RP72_21500 SM01350 RP72_21500 RP72_21525 SM00345 helix_turn_helix gluconate operon transcriptional repressor RP72_21525 SM00866 RP72_21525 RP72_21540 SM00382 ATPases associated with a variety of cellular activities RP72_21645 SM00091 PAS domain RP72_21645 SM00382 ATPases associated with a variety of cellular activities RP72_21660 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. RP72_21665 SM00849 Metallo-beta-lactamase superfamily RP72_21680 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) RP72_21680 SM00091 PAS domain RP72_21680 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain RP72_21680 SM00387 Histidine kinase-like ATPases RP72_21680 SM00388 His Kinase A (phosphoacceptor) domain RP72_21685 SM00448 cheY-homologous receiver domain RP72_21685 SM00862 Transcriptional regulatory protein, C terminal RP72_21710 SM00788 Adenylosuccinate synthetase RP72_21720 SM00382 ATPases associated with a variety of cellular activities RP72_21760 SM00267 diguanylate cyclase RP72_21785 SM01131 RP72_21785 RP72_21840 SM00382 ATPases associated with a variety of cellular activities RP72_21880 SM00849 Metallo-beta-lactamase superfamily RP72_21885 SM00347 helix_turn_helix multiple antibiotic resistance protein RP72_21925 SM00422 helix_turn_helix, mercury resistance RP72_21950 SM01266 RP72_21950 RP72_21960 SM00354 helix_turn _helix lactose operon repressor RP72_21990 SM00926 Molybdopterin oxidoreductase Fe4S4 domain RP72_22010 SM00470 ParB-like nuclease domain RP72_22025 SM00470 ParB-like nuclease domain RP72_22035 SM01228 RP72_22035 RP72_22045 SM00322 K homology RNA-binding domain RP72_22045 SM00393 Putative single-stranded nucleic acids-binding domain RP72_22045 SM01245 RP72_22045