AT706_00090	SM00226	Low molecular weight phosphatase family
AT706_00155	SM00382	ATPases associated with a variety of cellular activities
AT706_00190	SM00327	von Willebrand factor (vWF) type A domain
AT706_00200	SM00327	von Willebrand factor (vWF) type A domain
AT706_00215	SM00729	Elongator protein 3, MiaB family, Radical SAM
AT706_00220	SM00028	Tetratricopeptide repeats
AT706_00275	SM00422	helix_turn_helix, mercury resistance
AT706_00280	SM00155	Phospholipase D. Active site motifs.
AT706_00315	SM00014	Acid phosphatase homologues
AT706_00320	SM00938	Nitrogen regulatory protein P-II
AT706_00350	SM00710	Parallel beta-helix repeats
AT706_00350	SM00722	Domain present in carbohydrate binding proteins and sugar hydrolses
AT706_00360	SM00347	helix_turn_helix multiple antibiotic resistance protein
AT706_00385	SM00028	Tetratricopeptide repeats
AT706_00400	SM00387	Histidine kinase-like ATPases
AT706_00400	SM00388	His Kinase A (phosphoacceptor) domain
AT706_00400	SM00448	cheY-homologous receiver domain
AT706_00405	SM00448	cheY-homologous receiver domain
AT706_00405	SM00862	Transcriptional regulatory protein, C terminal
AT706_00435	SM00420	helix_turn_helix, Deoxyribose operon repressor
AT706_00435	SM01134	AT706_00435
AT706_00445	SM00487	DEAD-like helicases superfamily
AT706_00445	SM00490	helicase superfamily c-terminal domain
AT706_00475	SM00984	UDP binding domain
AT706_00535	SM00344	helix_turn_helix ASNC type
AT706_00550	SM00903	Flavin reductase like domain
AT706_00605	SM00287	Bacterial SH3 domain homologues
AT706_00620	SM00382	ATPases associated with a variety of cellular activities
AT706_00635	SM00354	helix_turn _helix lactose operon repressor
AT706_00650	SM00854	Bacterial capsule synthesis protein PGA_cap
AT706_00705	SM00047	Lysozyme subfamily 2
AT706_00705	SM00287	Bacterial SH3 domain homologues
AT706_00775	SM00382	ATPases associated with a variety of cellular activities
AT706_00820	SM00646	AT706_00820
AT706_00845	SM00984	UDP binding domain
AT706_00885	SM00387	Histidine kinase-like ATPases
AT706_00890	SM00421	helix_turn_helix, Lux Regulon
AT706_00890	SM00448	cheY-homologous receiver domain
AT706_00900	SM00487	DEAD-like helicases superfamily
AT706_00900	SM00490	helicase superfamily c-terminal domain
AT706_00990	SM00957	SecA DEAD-like domain
AT706_00990	SM00958	SecA preprotein cross-linking domain
AT706_00995	SM00937	AT706_00995
AT706_01010	SM00382	ATPases associated with a variety of cellular activities
AT706_01020	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
AT706_01020	SM00245	tail specific protease
AT706_01030	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
AT706_01055	SM00487	DEAD-like helicases superfamily
AT706_01055	SM00490	helicase superfamily c-terminal domain
AT706_01060	SM00382	ATPases associated with a variety of cellular activities
AT706_01100	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AT706_01100	SM00866	AT706_01100
AT706_01205	SM00382	ATPases associated with a variety of cellular activities
AT706_01210	SM00028	Tetratricopeptide repeats
AT706_01260	SM00448	cheY-homologous receiver domain
AT706_01260	SM00862	Transcriptional regulatory protein, C terminal
AT706_01265	SM00387	Histidine kinase-like ATPases
AT706_01270	SM00382	ATPases associated with a variety of cellular activities
AT706_01285	SM00947	Carbonic anhydrase
AT706_01305	SM00354	helix_turn _helix lactose operon repressor
AT706_01310	SM00642	Alpha-amylase domain
AT706_01340	SM00642	Alpha-amylase domain
AT706_01415	SM00640	Glycosyl hydrolases family 32
AT706_01460	SM00530	Helix-turn-helix XRE-family like proteins 
AT706_01555	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AT706_01555	SM00895	AT706_01555
AT706_01560	SM00354	helix_turn _helix lactose operon repressor
AT706_01590	SM00331	Sigma factor PP2C-like phosphatases
AT706_01600	SM00382	ATPases associated with a variety of cellular activities
AT706_01615	SM00421	helix_turn_helix, Lux Regulon
AT706_01615	SM00448	cheY-homologous receiver domain
AT706_01635	SM00636	AT706_01635
AT706_01660	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AT706_01675	SM00846	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
AT706_01700	SM01192	AT706_01700
AT706_01700	SM01193	AT706_01700
AT706_01710	SM00984	UDP binding domain
AT706_01785	SM00116	Domain in cystathionine beta-synthase and other proteins.
AT706_01785	SM00382	ATPases associated with a variety of cellular activities
AT706_01810	SM00116	Domain in cystathionine beta-synthase and other proteins.
AT706_01810	SM00382	ATPases associated with a variety of cellular activities
AT706_01855	SM00530	Helix-turn-helix XRE-family like proteins 
AT706_01860	SM00530	Helix-turn-helix XRE-family like proteins 
AT706_01865	SM00530	Helix-turn-helix XRE-family like proteins 
AT706_01885	SM00316	Ribosomal protein S1-like RNA-binding domain
AT706_01885	SM00357	Cold shock protein domain
AT706_01885	SM00955	AT706_01885
AT706_02050	SM00382	ATPases associated with a variety of cellular activities
AT706_02060	SM00382	ATPases associated with a variety of cellular activities
AT706_02075	SM00835	Cupin
AT706_02095	SM00448	cheY-homologous receiver domain
AT706_02095	SM00862	Transcriptional regulatory protein, C terminal
AT706_02100	SM00387	Histidine kinase-like ATPases
AT706_02100	SM00388	His Kinase A (phosphoacceptor) domain
AT706_02130	SM00382	ATPases associated with a variety of cellular activities
AT706_02165	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AT706_02165	SM00387	Histidine kinase-like ATPases
AT706_02170	SM00421	helix_turn_helix, Lux Regulon
AT706_02170	SM00448	cheY-homologous receiver domain
AT706_02210	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AT706_02210	SM00387	Histidine kinase-like ATPases
AT706_02210	SM00388	His Kinase A (phosphoacceptor) domain
AT706_02215	SM00448	cheY-homologous receiver domain
AT706_02215	SM00862	Transcriptional regulatory protein, C terminal
AT706_02220	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
AT706_02245	SM00382	ATPases associated with a variety of cellular activities
AT706_02275	SM00347	helix_turn_helix multiple antibiotic resistance protein
AT706_02330	SM00493	AT706_02330
AT706_02345	SM00382	ATPases associated with a variety of cellular activities
AT706_02345	SM00930	AT706_02345
AT706_02370	SM00382	ATPases associated with a variety of cellular activities
AT706_02395	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
AT706_02420	SM00465	GIY-YIG type nucleases (URI domain)
AT706_02450	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AT706_02450	SM00866	AT706_02450
AT706_02455	SM00382	ATPases associated with a variety of cellular activities
AT706_02495	SM01008	Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain
AT706_02575	SM00729	Elongator protein 3, MiaB family, Radical SAM
AT706_02675	SM01240	AT706_02675
AT706_02760	SM00823	Phosphopantetheine attachment site
AT706_02760	SM00824	Thioesterase
AT706_02765	SM00923	MbtH-like protein
AT706_02775	SM01002	Alanine dehydrogenase/PNT, C-terminal domain
AT706_02775	SM01003	Alanine dehydrogenase/PNT, N-terminal domain
AT706_02820	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
AT706_02865	SM00052	Putative diguanylate phosphodiesterase
AT706_02890	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
AT706_02890	SM00387	Histidine kinase-like ATPases
AT706_02895	SM00421	helix_turn_helix, Lux Regulon
AT706_02895	SM00448	cheY-homologous receiver domain
AT706_02960	SM00382	ATPases associated with a variety of cellular activities
AT706_02970	SM00448	cheY-homologous receiver domain
AT706_02975	SM00091	PAS domain
AT706_02975	SM00387	Histidine kinase-like ATPases
AT706_03005	SM00479	AT706_03005
AT706_03010	SM01298	AT706_03010
AT706_03015	SM00387	Histidine kinase-like ATPases
AT706_03015	SM00388	His Kinase A (phosphoacceptor) domain
AT706_03035	SM00344	helix_turn_helix ASNC type
AT706_03045	SM00316	Ribosomal protein S1-like RNA-binding domain
AT706_03100	SM00116	Domain in cystathionine beta-synthase and other proteins.
AT706_03100	SM01091	Transporter associated domain
AT706_03105	SM00642	Alpha-amylase domain
AT706_03125	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
AT706_03125	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AT706_03125	SM00319	Homologues of the ligand binding domain of Tar
AT706_03130	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
AT706_03130	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AT706_03130	SM00319	Homologues of the ligand binding domain of Tar
AT706_03135	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
AT706_03135	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AT706_03135	SM00319	Homologues of the ligand binding domain of Tar
AT706_03140	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
AT706_03140	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AT706_03140	SM00319	Homologues of the ligand binding domain of Tar
AT706_03150	SM01007	Class II Aldolase and Adducin N-terminal domain
AT706_03155	SM00420	helix_turn_helix, Deoxyribose operon repressor
AT706_03155	SM01134	AT706_03155
AT706_03205	SM00047	Lysozyme subfamily 2
AT706_03260	SM00244	prohibitin homologues
AT706_03405	SM00642	Alpha-amylase domain
AT706_03465	SM00984	UDP binding domain
AT706_03505	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
AT706_03515	SM00382	ATPases associated with a variety of cellular activities
AT706_03550	SM00947	Carbonic anhydrase
AT706_03555	SM01234	AT706_03555
AT706_03595	SM00382	ATPases associated with a variety of cellular activities
AT706_03655	SM00729	Elongator protein 3, MiaB family, Radical SAM
AT706_03670	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AT706_03675	SM00382	ATPases associated with a variety of cellular activities
AT706_03690	SM00382	ATPases associated with a variety of cellular activities
AT706_03700	SM00448	cheY-homologous receiver domain
AT706_03700	SM00862	Transcriptional regulatory protein, C terminal
AT706_03705	SM00387	Histidine kinase-like ATPases
AT706_03710	SM00382	ATPases associated with a variety of cellular activities
AT706_03730	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
AT706_03730	SM00091	PAS domain
AT706_03745	SM00450	Rhodanese Homology Domain
AT706_03770	SM00354	helix_turn _helix lactose operon repressor
AT706_03800	SM00729	Elongator protein 3, MiaB family, Radical SAM
AT706_03800	SM00876	Biotin and Thiamin Synthesis associated domain
AT706_03825	SM00342	helix_turn_helix, arabinose operon control protein
AT706_03875	SM00363	S4 RNA-binding domain
AT706_03880	SM00420	helix_turn_helix, Deoxyribose operon repressor
AT706_03885	SM00382	ATPases associated with a variety of cellular activities
AT706_03920	SM00046	Diacylglycerol kinase catalytic domain (presumed)
AT706_03925	SM00642	Alpha-amylase domain
AT706_03945	SM00849	Metallo-beta-lactamase superfamily
AT706_03950	SM00919	Malic enzyme, NAD binding domain
AT706_03950	SM01274	AT706_03950
AT706_03985	SM00382	ATPases associated with a variety of cellular activities
AT706_03985	SM00843	AT706_03985
AT706_04010	SM00830	Chorismate mutase type II
AT706_04015	SM00354	helix_turn _helix lactose operon repressor
AT706_04035	SM00116	Domain in cystathionine beta-synthase and other proteins.
AT706_04050	SM00363	S4 RNA-binding domain
AT706_04060	SM00363	S4 RNA-binding domain
AT706_04060	SM01390	AT706_04060
AT706_04065	SM00267	diguanylate cyclase
AT706_04070	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
AT706_04100	SM00981	AT706_04100
AT706_04160	SM00852	Probable molybdopterin binding domain
AT706_04185	SM00849	Metallo-beta-lactamase superfamily
AT706_04200	SM00062	Bacterial periplasmic substrate-binding proteins
AT706_04205	SM00062	Bacterial periplasmic substrate-binding proteins
AT706_04220	SM00382	ATPases associated with a variety of cellular activities
AT706_04240	SM00904	Riboflavin kinase
AT706_04260	SM00116	Domain in cystathionine beta-synthase and other proteins.
AT706_04290	SM00481	DNA polymerase alpha chain like domain
AT706_04295	SM00919	Malic enzyme, NAD binding domain
AT706_04295	SM01274	AT706_04295
AT706_04340	SM01329	AT706_04340
AT706_04350	SM00448	cheY-homologous receiver domain
AT706_04350	SM00862	Transcriptional regulatory protein, C terminal
AT706_04355	SM00091	PAS domain
AT706_04355	SM00387	Histidine kinase-like ATPases
AT706_04355	SM00388	His Kinase A (phosphoacceptor) domain
AT706_04360	SM00279	Helix-hairpin-helix class 2 (Pol1 family) motifs
AT706_04360	SM00474	3'-5' exonuclease
AT706_04360	SM00475	5'-3' exonuclease
AT706_04360	SM00482	DNA polymerase A domain
AT706_04365	SM00898	Formamidopyrimidine-DNA glycosylase N-terminal domain
AT706_04365	SM01232	AT706_04365
AT706_04400	SM00846	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
AT706_04420	SM00382	ATPases associated with a variety of cellular activities
AT706_04435	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
AT706_04445	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
AT706_04445	SM00387	Histidine kinase-like ATPases
AT706_04450	SM00448	cheY-homologous receiver domain
AT706_04450	SM00850	LytTr DNA-binding domain
AT706_04515	SM01007	Class II Aldolase and Adducin N-terminal domain
AT706_04545	SM00813	Alpha-L-arabinofuranosidase C-terminus
AT706_04580	SM00967	RNA 2'-O ribose methyltransferase substrate binding
AT706_04595	SM00873	B3/4 domain
AT706_04595	SM00874	tRNA synthetase B5 domain
AT706_04595	SM00896	Ferredoxin-fold anticodon binding domain
AT706_04615	SM00278	Helix-hairpin-helix DNA-binding motif class 1
AT706_04615	SM00481	DNA polymerase alpha chain like domain
AT706_04615	SM00483	DNA polymerase X family
AT706_04620	SM00463	Small MutS-related domain
AT706_04620	SM00533	DNA-binding domain of DNA mismatch repair MUTS family
AT706_04620	SM00534	ATPase domain of DNA mismatch repair MUTS family
AT706_04645	SM00893	Electron transfer flavoprotein domain
AT706_04650	SM00893	Electron transfer flavoprotein domain
AT706_04655	SM00813	Alpha-L-arabinofuranosidase C-terminus
AT706_04665	SM00465	GIY-YIG type nucleases (URI domain)
AT706_04705	SM00421	helix_turn_helix, Lux Regulon
AT706_04710	SM00347	helix_turn_helix multiple antibiotic resistance protein
AT706_04720	SM00909	Sporulation and spore germination
AT706_04780	SM00917	LeuA allosteric (dimerisation) domain
AT706_04785	SM01329	AT706_04785
AT706_04810	SM00382	ATPases associated with a variety of cellular activities
AT706_04810	SM00994	ClpX C4-type zinc finger
AT706_04810	SM01086	C-terminal, D2-small domain, of ClpB protein
AT706_04815	SM00382	ATPases associated with a variety of cellular activities
AT706_04820	SM00382	ATPases associated with a variety of cellular activities
AT706_04820	SM00464	Found in ATP-dependent protease La (LON)
AT706_04855	SM01004	Delta-aminolevulinic acid dehydratase
AT706_04865	SM00257	Lysin motif
AT706_04965	SM01317	AT706_04965
AT706_05010	SM00257	Lysin motif
AT706_05065	SM00278	Helix-hairpin-helix DNA-binding motif class 1
AT706_05070	SM00382	ATPases associated with a variety of cellular activities
AT706_05090	SM01323	AT706_05090
AT706_05140	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
AT706_05140	SM00954	Region found in RelA / SpoT proteins
AT706_05150	SM00287	Bacterial SH3 domain homologues
AT706_05150	SM00646	AT706_05150
AT706_05180	SM00382	ATPases associated with a variety of cellular activities
AT706_05200	SM00028	Tetratricopeptide repeats
AT706_05205	SM00382	ATPases associated with a variety of cellular activities
AT706_05235	SM00062	Bacterial periplasmic substrate-binding proteins
AT706_05235	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
AT706_05240	SM00382	ATPases associated with a variety of cellular activities
AT706_05250	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
AT706_05260	SM00732	Likely ribonuclease with RNase H fold.
AT706_05315	SM00650	Ribosomal RNA adenine dimethylases
AT706_05345	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
AT706_05345	SM00929	NADH-ubiquinone oxidoreductase-G iron-sulfur binding region
AT706_05420	SM00382	ATPases associated with a variety of cellular activities
AT706_05445	SM00640	Glycosyl hydrolases family 32
AT706_05455	SM00829	Enoylreductase
AT706_05465	SM00422	helix_turn_helix, mercury resistance
AT706_05505	SM00287	Bacterial SH3 domain homologues
AT706_05600	SM00344	helix_turn_helix ASNC type
AT706_05660	SM01091	Transporter associated domain
AT706_05675	SM00422	helix_turn_helix, mercury resistance
AT706_05705	SM00028	Tetratricopeptide repeats
AT706_05715	SM00450	Rhodanese Homology Domain
AT706_05720	SM00347	helix_turn_helix multiple antibiotic resistance protein
AT706_05780	SM00860	SMI1 / KNR4 family
AT706_05790	SM00822	AT706_05790
AT706_05815	SM00448	cheY-homologous receiver domain
AT706_05815	SM00862	Transcriptional regulatory protein, C terminal
AT706_05820	SM00388	His Kinase A (phosphoacceptor) domain
AT706_05850	SM01350	AT706_05850
AT706_05860	SM00644	AT706_05860
AT706_05895	SM01103	AT706_05895
AT706_05905	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
AT706_05925	SM00278	Helix-hairpin-helix DNA-binding motif class 1
AT706_05935	SM00849	Metallo-beta-lactamase superfamily
AT706_05970	SM00838	Elongation factor G C-terminus
AT706_05975	SM00729	Elongator protein 3, MiaB family, Radical SAM
AT706_05995	SM00271	DnaJ molecular chaperone homology domain
AT706_06010	SM00729	Elongator protein 3, MiaB family, Radical SAM
AT706_06065	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
AT706_06110	SM00116	Domain in cystathionine beta-synthase and other proteins.
AT706_06125	SM00400	zinc finger
AT706_06125	SM00493	AT706_06125
AT706_06160	SM00487	DEAD-like helicases superfamily
AT706_06160	SM00490	helicase superfamily c-terminal domain
AT706_06165	SM00518	AP endonuclease family 2
AT706_06200	SM00257	Lysin motif
AT706_06245	SM00382	ATPases associated with a variety of cellular activities
AT706_06250	SM00382	ATPases associated with a variety of cellular activities
AT706_06290	SM00028	Tetratricopeptide repeats
AT706_06310	SM00631	AT706_06310
AT706_06330	SM00849	Metallo-beta-lactamase superfamily
AT706_06355	SM01091	Transporter associated domain
AT706_06365	SM00382	ATPases associated with a variety of cellular activities
AT706_06425	SM00530	Helix-turn-helix XRE-family like proteins 
AT706_06440	SM00487	DEAD-like helicases superfamily
AT706_06440	SM00490	helicase superfamily c-terminal domain
AT706_06460	SM00450	Rhodanese Homology Domain
AT706_06470	SM00529	Helix-turn-helix diphteria tox regulatory element
AT706_06505	SM00841	Elongation factor P, C-terminal
AT706_06505	SM01185	AT706_06505
AT706_06515	SM00382	ATPases associated with a variety of cellular activities
AT706_06560	SM00878	Biotin carboxylase C-terminal domain
AT706_06595	SM00861	Transketolase, pyrimidine binding domain
AT706_06600	SM00363	S4 RNA-binding domain
AT706_06615	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
AT706_06625	SM00448	cheY-homologous receiver domain
AT706_06650	SM00646	AT706_06650
AT706_06695	SM00091	PAS domain
AT706_06695	SM00382	ATPases associated with a variety of cellular activities
AT706_06705	SM00839	Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
AT706_06725	SM00861	Transketolase, pyrimidine binding domain
AT706_06735	SM00422	helix_turn_helix, mercury resistance
AT706_06745	SM00046	Diacylglycerol kinase catalytic domain (presumed)
AT706_06755	SM00062	Bacterial periplasmic substrate-binding proteins
AT706_06755	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
AT706_06765	SM00382	ATPases associated with a variety of cellular activities
AT706_06820	SM01350	AT706_06820
AT706_06830	SM00849	Metallo-beta-lactamase superfamily
AT706_06860	SM00849	Metallo-beta-lactamase superfamily
AT706_06965	SM00530	Helix-turn-helix XRE-family like proteins 
AT706_06970	SM00870	AT706_06970
AT706_06985	SM00919	Malic enzyme, NAD binding domain
AT706_06985	SM01274	AT706_06985
AT706_07025	SM00936	Penicillin-binding protein 5, C-terminal domain 
AT706_07035	SM00387	Histidine kinase-like ATPases
AT706_07175	SM00363	S4 RNA-binding domain
AT706_07195	SM00448	cheY-homologous receiver domain
AT706_07195	SM00862	Transcriptional regulatory protein, C terminal
AT706_07200	SM00091	PAS domain
AT706_07200	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AT706_07200	SM00387	Histidine kinase-like ATPases
AT706_07200	SM00388	His Kinase A (phosphoacceptor) domain
AT706_07245	SM00487	DEAD-like helicases superfamily
AT706_07245	SM00490	helicase superfamily c-terminal domain
AT706_07255	SM00257	Lysin motif
AT706_07275	SM00839	Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
AT706_07315	SM00316	Ribosomal protein S1-like RNA-binding domain
AT706_07320	SM01240	AT706_07320
AT706_07370	SM00411	bacterial (prokaryotic) histone like domain
AT706_07400	SM00562	AT706_07400
AT706_07410	SM00138	Methyltransferase, chemotaxis proteins 
AT706_07475	SM00028	Tetratricopeptide repeats
AT706_07480	SM00914	AT706_07480
AT706_07530	SM00851	MGS-like domain
AT706_07570	SM00479	AT706_07570
AT706_07570	SM00487	DEAD-like helicases superfamily
AT706_07570	SM00491	AT706_07570
AT706_07600	SM00478	endonuclease III
AT706_07600	SM00525	AT706_07600
AT706_07660	SM00487	DEAD-like helicases superfamily
AT706_07660	SM00490	helicase superfamily c-terminal domain
AT706_07685	SM00981	AT706_07685
AT706_07695	SM00491	AT706_07695
AT706_07710	SM00354	helix_turn _helix lactose operon repressor
AT706_07775	SM00279	Helix-hairpin-helix class 2 (Pol1 family) motifs
AT706_07775	SM00475	5'-3' exonuclease
AT706_07815	SM00357	Cold shock protein domain
AT706_07835	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
AT706_07840	SM00567	E-Z type HEAT repeats
AT706_07840	SM00932	Scaffold protein Nfu/NifU N terminal
AT706_07895	SM00382	ATPases associated with a variety of cellular activities
AT706_07940	SM00347	helix_turn_helix multiple antibiotic resistance protein
AT706_08005	SM00882	Coenzyme A transferase
AT706_08010	SM00882	Coenzyme A transferase
AT706_08060	SM00014	Acid phosphatase homologues
AT706_08095	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
AT706_08095	SM00245	tail specific protease
AT706_08190	SM00257	Lysin motif
AT706_08200	SM00382	ATPases associated with a variety of cellular activities
AT706_08205	SM00327	von Willebrand factor (vWF) type A domain
AT706_08210	SM00861	Transketolase, pyrimidine binding domain
AT706_08295	SM00341	Helicase and RNase D C-terminal
AT706_08295	SM00487	DEAD-like helicases superfamily
AT706_08295	SM00490	helicase superfamily c-terminal domain
AT706_08295	SM00956	AT706_08295
AT706_08300	SM00257	Lysin motif
AT706_08305	SM00421	helix_turn_helix, Lux Regulon
AT706_08305	SM00448	cheY-homologous receiver domain
AT706_08345	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
AT706_08360	SM00871	Bacterial transcription activator, effector binding domain
AT706_08365	SM00849	Metallo-beta-lactamase superfamily
AT706_08380	SM00342	helix_turn_helix, arabinose operon control protein
AT706_08395	SM00860	SMI1 / KNR4 family
AT706_08405	SM00860	SMI1 / KNR4 family
AT706_08490	SM00530	Helix-turn-helix XRE-family like proteins 
AT706_08520	SM00835	Cupin
AT706_08535	SM00656	AT706_08535
AT706_08555	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
AT706_08555	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AT706_08580	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
AT706_08615	SM00822	AT706_08615
AT706_08630	SM00359	Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase
AT706_08650	SM00829	Enoylreductase
AT706_08700	SM00823	Phosphopantetheine attachment site
AT706_08705	SM00823	Phosphopantetheine attachment site
AT706_08710	SM00823	Phosphopantetheine attachment site
AT706_08715	SM00823	Phosphopantetheine attachment site
AT706_08720	SM00823	Phosphopantetheine attachment site
AT706_08720	SM00824	Thioesterase
AT706_08755	SM00878	Biotin carboxylase C-terminal domain
AT706_08800	SM00606	Cellulose Binding Domain Type IV
AT706_08820	SM01067	Cellulose binding domain
AT706_08840	SM00434	DNA Topoisomerase IV
AT706_08845	SM00387	Histidine kinase-like ATPases
AT706_08845	SM00433	TopoisomeraseII
AT706_08850	SM00881	CoA binding domain
AT706_08855	SM01207	AT706_08855
AT706_08925	SM00448	cheY-homologous receiver domain
AT706_08950	SM00861	Transketolase, pyrimidine binding domain
AT706_08960	SM00857	Resolvase, N terminal domain
AT706_08965	SM00257	Lysin motif
AT706_09105	SM01005	Alanine racemase, C-terminal domain
AT706_09115	SM00318	Staphylococcal nuclease homologues
AT706_09195	SM00860	SMI1 / KNR4 family
AT706_09240	SM01230	AT706_09240
AT706_09245	SM00422	helix_turn_helix, mercury resistance
AT706_09265	SM00382	ATPases associated with a variety of cellular activities
AT706_09270	SM00646	AT706_09270
AT706_09355	SM00849	Metallo-beta-lactamase superfamily
AT706_09370	SM00823	Phosphopantetheine attachment site
AT706_09370	SM00825	Beta-ketoacyl synthase
AT706_09370	SM01294	AT706_09370
AT706_09375	SM00822	AT706_09375
AT706_09375	SM00823	Phosphopantetheine attachment site
AT706_09375	SM00825	Beta-ketoacyl synthase
AT706_09375	SM00826	AT706_09375
AT706_09375	SM01294	AT706_09375
AT706_09380	SM00822	AT706_09380
AT706_09380	SM00823	Phosphopantetheine attachment site
AT706_09380	SM00825	Beta-ketoacyl synthase
AT706_09380	SM00826	AT706_09380
AT706_09380	SM01294	AT706_09380
AT706_09385	SM00822	AT706_09385
AT706_09385	SM00823	Phosphopantetheine attachment site
AT706_09385	SM00825	Beta-ketoacyl synthase
AT706_09385	SM00826	AT706_09385
AT706_09385	SM01294	AT706_09385
AT706_09390	SM00822	AT706_09390
AT706_09390	SM00823	Phosphopantetheine attachment site
AT706_09390	SM00825	Beta-ketoacyl synthase
AT706_09390	SM00826	AT706_09390
AT706_09390	SM01294	AT706_09390
AT706_09410	SM00825	Beta-ketoacyl synthase
AT706_09420	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
AT706_09425	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
AT706_09430	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
AT706_09440	SM00849	Metallo-beta-lactamase superfamily
AT706_09460	SM00853	MutL C terminal dimerisation domain
AT706_09460	SM01340	AT706_09460
AT706_09465	SM00533	DNA-binding domain of DNA mismatch repair MUTS family
AT706_09465	SM00534	ATPase domain of DNA mismatch repair MUTS family
AT706_09480	SM00729	Elongator protein 3, MiaB family, Radical SAM
AT706_09490	SM00829	Enoylreductase
AT706_09505	SM00322	K homology RNA-binding domain
AT706_09505	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
AT706_09515	SM00382	ATPases associated with a variety of cellular activities
AT706_09520	SM00852	Probable molybdopterin binding domain
AT706_09530	SM00530	Helix-turn-helix XRE-family like proteins 
AT706_09565	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AT706_09565	SM00866	AT706_09565
AT706_09570	SM00382	ATPases associated with a variety of cellular activities
AT706_09570	SM00843	AT706_09570
AT706_09585	SM00849	Metallo-beta-lactamase superfamily
AT706_09590	SM01130	AT706_09590
AT706_09600	SM00859	Semialdehyde dehydrogenase, NAD binding domain
AT706_09635	SM00316	Ribosomal protein S1-like RNA-binding domain
AT706_09635	SM00322	K homology RNA-binding domain
AT706_09640	SM01387	AT706_09640
AT706_09645	SM00904	Riboflavin kinase
AT706_09680	SM00316	Ribosomal protein S1-like RNA-binding domain
AT706_09680	SM00322	K homology RNA-binding domain
AT706_09690	SM00479	AT706_09690
AT706_09690	SM00481	DNA polymerase alpha chain like domain
AT706_09700	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
AT706_09760	SM00260	Two component signalling adaptor domain
AT706_09765	SM00073	Histidine Phosphotransfer domain
AT706_09765	SM00260	Two component signalling adaptor domain
AT706_09765	SM00387	Histidine kinase-like ATPases
AT706_09765	SM01231	AT706_09765
AT706_09770	SM00448	cheY-homologous receiver domain
AT706_09780	SM00962	SRP54-type protein, GTPase domain
AT706_09815	SM00448	cheY-homologous receiver domain
AT706_09865	SM00382	ATPases associated with a variety of cellular activities
AT706_09905	SM00382	ATPases associated with a variety of cellular activities
AT706_09905	SM01086	C-terminal, D2-small domain, of ClpB protein
AT706_09925	SM00436	Bacterial DNA topoisomeraes I ATP-binding domain
AT706_09925	SM00437	Bacterial DNA topoisomerase I DNA-binding domain
AT706_09925	SM00493	AT706_09925
AT706_09935	SM00881	CoA binding domain
AT706_09995	SM00382	ATPases associated with a variety of cellular activities
AT706_09995	SM00962	SRP54-type protein, GTPase domain
AT706_09995	SM00963	SRP54-type protein, helical bundle domain
AT706_10010	SM00382	ATPases associated with a variety of cellular activities
AT706_10010	SM00962	SRP54-type protein, GTPase domain
AT706_10010	SM00963	SRP54-type protein, helical bundle domain
AT706_10015	SM00968	SMC proteins Flexible Hinge Domain
AT706_10020	SM00358	Double-stranded RNA binding motif
AT706_10020	SM00535	Ribonuclease III family
AT706_10030	SM00822	AT706_10030
AT706_10035	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
AT706_10050	SM00487	DEAD-like helicases superfamily
AT706_10050	SM00490	helicase superfamily c-terminal domain
AT706_10065	SM01120	AT706_10065
AT706_10065	SM01121	AT706_10065
AT706_10085	SM00983	Thiamin pyrophosphokinase, vitamin B1 binding domain
AT706_10100	SM00220	Serine/Threonine protein kinases, catalytic domain
AT706_10100	SM00740	AT706_10100
AT706_10105	SM00331	Sigma factor PP2C-like phosphatases
AT706_10105	SM00332	Serine/threonine phosphatases, family 2C, catalytic domain
AT706_10130	SM00487	DEAD-like helicases superfamily
AT706_10130	SM00490	helicase superfamily c-terminal domain
AT706_10140	SM01409	AT706_10140
AT706_10145	SM00072	Guanylate kinase homologues.
AT706_10160	SM00831	Cation transporter/ATPase, N-terminus
AT706_10215	SM00934	Orotidine 5'-phosphate decarboxylase / HUMPS family
AT706_10230	SM00851	MGS-like domain
AT706_10230	SM01096	Carbamoyl-phosphate synthetase large chain, oligomerisation domain
AT706_10230	SM01209	AT706_10230
AT706_10235	SM01097	Carbamoyl-phosphate synthase small chain, CPSase domain
AT706_10260	SM00363	S4 RNA-binding domain
AT706_10285	SM00363	S4 RNA-binding domain
AT706_10320	SM00382	ATPases associated with a variety of cellular activities
AT706_10345	SM00864	Tubulin/FtsZ family, GTPase domain
AT706_10345	SM00865	Tubulin/FtsZ family, C-terminal domain
AT706_10350	SM00842	Cell division protein FtsA
AT706_10415	SM00740	AT706_10415
AT706_10425	SM00740	AT706_10425
AT706_10490	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
AT706_10540	SM00116	Domain in cystathionine beta-synthase and other proteins.
AT706_10585	SM00878	Biotin carboxylase C-terminal domain
AT706_10610	SM00670	Large family of predicted nucleotide-binding domains
AT706_10630	SM00838	Elongation factor G C-terminus
AT706_10720	SM00861	Transketolase, pyrimidine binding domain
AT706_10755	SM00849	Metallo-beta-lactamase superfamily
AT706_10775	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
AT706_10775	SM00091	PAS domain
AT706_10775	SM00387	Histidine kinase-like ATPases
AT706_10775	SM00388	His Kinase A (phosphoacceptor) domain
AT706_10780	SM00966	SpoVT / AbrB like domain 
AT706_10805	SM00382	ATPases associated with a variety of cellular activities
AT706_10830	SM00420	helix_turn_helix, Deoxyribose operon repressor
AT706_10830	SM01134	AT706_10830
AT706_10835	SM01066	Carbohydrate binding domain
AT706_10840	SM00382	ATPases associated with a variety of cellular activities
AT706_10855	SM00382	ATPases associated with a variety of cellular activities
AT706_10860	SM00382	ATPases associated with a variety of cellular activities
AT706_10880	SM00852	Probable molybdopterin binding domain
AT706_10980	SM00052	Putative diguanylate phosphodiesterase
AT706_10995	SM00257	Lysin motif
AT706_11010	SM00260	Two component signalling adaptor domain
AT706_11010	SM00448	cheY-homologous receiver domain
AT706_11025	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
AT706_11025	SM00091	PAS domain
AT706_11025	SM00387	Histidine kinase-like ATPases
AT706_11025	SM00388	His Kinase A (phosphoacceptor) domain
AT706_11045	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
AT706_11045	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AT706_11080	SM01061	CAT RNA binding domain
AT706_11085	SM00354	helix_turn _helix lactose operon repressor
AT706_11145	SM00636	AT706_11145
AT706_11150	SM00257	Lysin motif
AT706_11155	SM00257	Lysin motif
AT706_11185	SM00382	ATPases associated with a variety of cellular activities
AT706_11185	SM01086	C-terminal, D2-small domain, of ClpB protein
AT706_11200	SM00347	helix_turn_helix multiple antibiotic resistance protein
AT706_11205	SM00387	Histidine kinase-like ATPases
AT706_11205	SM00388	His Kinase A (phosphoacceptor) domain
AT706_11230	SM01007	Class II Aldolase and Adducin N-terminal domain
AT706_11275	SM00091	PAS domain
AT706_11275	SM00387	Histidine kinase-like ATPases
AT706_11275	SM00388	His Kinase A (phosphoacceptor) domain
AT706_11335	SM00052	Putative diguanylate phosphodiesterase
AT706_11335	SM00267	diguanylate cyclase
AT706_11340	SM00559	Ku70 and Ku80 are 70kDa and 80kDa subunits of the Lupus Ku autoantigen
AT706_11375	SM00347	helix_turn_helix multiple antibiotic resistance protein
AT706_11390	SM00422	helix_turn_helix, mercury resistance
AT706_11395	SM00116	Domain in cystathionine beta-synthase and other proteins.
AT706_11395	SM00924	MgtE intracellular N domain
AT706_11425	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AT706_11425	SM00387	Histidine kinase-like ATPases
AT706_11425	SM00388	His Kinase A (phosphoacceptor) domain
AT706_11430	SM00448	cheY-homologous receiver domain
AT706_11430	SM00862	Transcriptional regulatory protein, C terminal
AT706_11445	SM00382	ATPases associated with a variety of cellular activities
AT706_11470	SM00855	Phosphoglycerate mutase family
AT706_11485	SM00347	helix_turn_helix multiple antibiotic resistance protein
AT706_11500	SM00359	Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase
AT706_11560	SM00382	ATPases associated with a variety of cellular activities
AT706_11570	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
AT706_11585	SM00382	ATPases associated with a variety of cellular activities
AT706_11610	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
AT706_11660	SM00257	Lysin motif
AT706_11660	SM00644	AT706_11660
AT706_11725	SM00257	Lysin motif
AT706_11830	SM00382	ATPases associated with a variety of cellular activities
AT706_11845	SM00530	Helix-turn-helix XRE-family like proteins 
AT706_11870	SM00257	Lysin motif
AT706_11870	SM00644	AT706_11870
AT706_11885	SM00028	Tetratricopeptide repeats
AT706_11890	SM00382	ATPases associated with a variety of cellular activities
AT706_11905	SM00858	AT706_11905
AT706_11915	SM00354	helix_turn _helix lactose operon repressor
AT706_11935	SM00829	Enoylreductase
AT706_11965	SM00835	Cupin
AT706_11975	SM00382	ATPases associated with a variety of cellular activities
AT706_12025	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
AT706_12025	SM00929	NADH-ubiquinone oxidoreductase-G iron-sulfur binding region
AT706_12335	SM00954	Region found in RelA / SpoT proteins
AT706_12345	SM01118	AT706_12345
AT706_12410	SM00382	ATPases associated with a variety of cellular activities
AT706_12415	SM00382	ATPases associated with a variety of cellular activities
AT706_12460	SM00382	ATPases associated with a variety of cellular activities
AT706_12465	SM00382	ATPases associated with a variety of cellular activities
AT706_12475	SM00825	Beta-ketoacyl synthase
AT706_12525	SM01096	Carbamoyl-phosphate synthetase large chain, oligomerisation domain
AT706_12530	SM01097	Carbamoyl-phosphate synthase small chain, CPSase domain
AT706_12550	SM00859	Semialdehyde dehydrogenase, NAD binding domain
AT706_12635	SM00752	Horizontally Transferred TransMembrane Domain
AT706_12645	SM00316	Ribosomal protein S1-like RNA-binding domain
AT706_12675	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
AT706_12720	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AT706_12740	SM00354	helix_turn _helix lactose operon repressor
AT706_12745	SM00342	helix_turn_helix, arabinose operon control protein
AT706_12880	SM00354	helix_turn _helix lactose operon repressor
AT706_12905	SM00347	helix_turn_helix multiple antibiotic resistance protein
AT706_12940	SM00894	Excalibur calcium-binding domain
AT706_12955	SM00914	AT706_12955
AT706_12970	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
AT706_12990	SM00855	Phosphoglycerate mutase family
AT706_13000	SM00829	Enoylreductase
AT706_13040	SM00849	Metallo-beta-lactamase superfamily
AT706_13055	SM01022	AT706_13055
AT706_13140	SM00382	ATPases associated with a variety of cellular activities
AT706_13170	SM00347	helix_turn_helix multiple antibiotic resistance protein
AT706_13200	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
AT706_13220	SM00382	ATPases associated with a variety of cellular activities
AT706_13250	SM00729	Elongator protein 3, MiaB family, Radical SAM
AT706_13300	SM00382	ATPases associated with a variety of cellular activities
AT706_13305	SM00382	ATPases associated with a variety of cellular activities
AT706_13365	SM01091	Transporter associated domain
AT706_13375	SM00422	helix_turn_helix, mercury resistance
AT706_13380	SM01091	Transporter associated domain
AT706_13385	SM00563	Phosphate acyltransferases
AT706_13445	SM00257	Lysin motif
AT706_13450	SM00098	Alkaline phosphatase homologues
AT706_13475	SM00257	Lysin motif
AT706_13495	SM00421	helix_turn_helix, Lux Regulon
AT706_13495	SM00448	cheY-homologous receiver domain
AT706_13500	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
AT706_13500	SM00387	Histidine kinase-like ATPases
AT706_13545	SM00116	Domain in cystathionine beta-synthase and other proteins.
AT706_13555	SM00363	S4 RNA-binding domain
AT706_13565	SM00318	Staphylococcal nuclease homologues
AT706_13595	SM00267	diguanylate cyclase
AT706_13605	SM00357	Cold shock protein domain
AT706_13615	SM00382	ATPases associated with a variety of cellular activities
AT706_13620	SM00382	ATPases associated with a variety of cellular activities
AT706_13625	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AT706_13655	SM00347	helix_turn_helix multiple antibiotic resistance protein
AT706_13670	SM00763	PrkA AAA domain
AT706_13700	SM00567	E-Z type HEAT repeats
AT706_13715	SM00530	Helix-turn-helix XRE-family like proteins 
AT706_13745	SM00062	Bacterial periplasmic substrate-binding proteins
AT706_13750	SM00382	ATPases associated with a variety of cellular activities
AT706_13755	SM01060	AT706_13755
AT706_13920	SM00382	ATPases associated with a variety of cellular activities
AT706_13950	SM00478	endonuclease III
AT706_13950	SM00525	AT706_13950
AT706_13980	SM00287	Bacterial SH3 domain homologues
AT706_14060	SM00347	helix_turn_helix multiple antibiotic resistance protein
AT706_14090	SM00382	ATPases associated with a variety of cellular activities
AT706_14135	SM00382	ATPases associated with a variety of cellular activities
AT706_14140	SM00421	helix_turn_helix, Lux Regulon
AT706_14140	SM00448	cheY-homologous receiver domain
AT706_14145	SM00387	Histidine kinase-like ATPases
AT706_14160	SM00382	ATPases associated with a variety of cellular activities
AT706_14165	SM00382	ATPases associated with a variety of cellular activities
AT706_14215	SM00382	ATPases associated with a variety of cellular activities
AT706_14230	SM00861	Transketolase, pyrimidine binding domain
AT706_14265	SM00478	endonuclease III
AT706_14335	SM00226	Low molecular weight phosphatase family
AT706_14365	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AT706_14365	SM00866	AT706_14365
AT706_14370	SM00642	Alpha-amylase domain
AT706_14455	SM00849	Metallo-beta-lactamase superfamily
AT706_14475	SM00448	cheY-homologous receiver domain
AT706_14480	SM00387	Histidine kinase-like ATPases
AT706_14490	SM00656	AT706_14490
AT706_14520	SM00382	ATPases associated with a variety of cellular activities
AT706_14525	SM00829	Enoylreductase
AT706_14535	SM00487	DEAD-like helicases superfamily
AT706_14535	SM00490	helicase superfamily c-terminal domain
AT706_14540	SM00382	ATPases associated with a variety of cellular activities
AT706_14560	SM00422	helix_turn_helix, mercury resistance
AT706_14570	SM00382	ATPases associated with a variety of cellular activities
AT706_14575	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
AT706_14740	SM00342	helix_turn_helix, arabinose operon control protein
AT706_14765	SM00342	helix_turn_helix, arabinose operon control protein
AT706_14765	SM00448	cheY-homologous receiver domain
AT706_14770	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AT706_14770	SM00387	Histidine kinase-like ATPases
AT706_14835	SM00028	Tetratricopeptide repeats
AT706_14915	SM00046	Diacylglycerol kinase catalytic domain (presumed)
AT706_14930	SM00845	GatB domain
AT706_14965	SM00278	Helix-hairpin-helix DNA-binding motif class 1
AT706_14965	SM00292	breast cancer carboxy-terminal domain
AT706_14965	SM00532	Ligase N family
AT706_15015	SM00344	helix_turn_helix ASNC type
AT706_15020	SM01209	AT706_15020
AT706_15020	SM01210	AT706_15020
AT706_15025	SM00798	AICARFT/IMPCHase bienzyme
AT706_15025	SM00851	MGS-like domain
AT706_15050	SM01211	AT706_15050
AT706_15065	SM00998	Adenylosuccinate lyase C-terminus
AT706_15075	SM01001	AIR carboxylase
AT706_15120	SM00460	Transglutaminase/protease-like homologues
AT706_15185	SM00829	Enoylreductase
AT706_15230	SM00829	Enoylreductase
AT706_15235	SM00028	Tetratricopeptide repeats
AT706_15235	SM00382	ATPases associated with a variety of cellular activities
AT706_15250	SM00883	Chaperonin 10 Kd subunit
AT706_15275	SM00881	CoA binding domain
AT706_15285	SM00382	ATPases associated with a variety of cellular activities
AT706_15370	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AT706_15370	SM00866	AT706_15370
AT706_15405	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
AT706_15425	SM00098	Alkaline phosphatase homologues
AT706_15440	SM00257	Lysin motif
AT706_15440	SM00636	AT706_15440
AT706_15445	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AT706_15445	SM00895	AT706_15445
AT706_15460	SM00347	helix_turn_helix multiple antibiotic resistance protein
AT706_15460	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
AT706_15475	SM00347	helix_turn_helix multiple antibiotic resistance protein
AT706_15490	SM00382	ATPases associated with a variety of cellular activities
AT706_15590	SM00422	helix_turn_helix, mercury resistance
AT706_15590	SM00871	Bacterial transcription activator, effector binding domain
AT706_15610	SM00421	helix_turn_helix, Lux Regulon
AT706_15610	SM00448	cheY-homologous receiver domain
AT706_15615	SM00387	Histidine kinase-like ATPases
AT706_15630	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
AT706_15640	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AT706_15650	SM00448	cheY-homologous receiver domain
AT706_15650	SM00862	Transcriptional regulatory protein, C terminal
AT706_15655	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AT706_15655	SM00387	Histidine kinase-like ATPases
AT706_15655	SM00388	His Kinase A (phosphoacceptor) domain
AT706_15690	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
AT706_15740	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AT706_15770	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AT706_15775	SM00342	helix_turn_helix, arabinose operon control protein
AT706_15775	SM00871	Bacterial transcription activator, effector binding domain
AT706_15785	SM00342	helix_turn_helix, arabinose operon control protein
AT706_15790	SM01058	CarD-like/TRCF domain
AT706_15795	SM00357	Cold shock protein domain
AT706_15810	SM00530	Helix-turn-helix XRE-family like proteins 
AT706_15825	SM00382	ATPases associated with a variety of cellular activities
AT706_15830	SM00220	Serine/Threonine protein kinases, catalytic domain
AT706_15830	SM01260	AT706_15830
AT706_15835	SM00220	Serine/Threonine protein kinases, catalytic domain
AT706_15835	SM01260	AT706_15835
AT706_15880	SM00731	SprT homologues.
AT706_15890	SM00316	Ribosomal protein S1-like RNA-binding domain
AT706_15890	SM00732	Likely ribonuclease with RNase H fold.
AT706_15895	SM00347	helix_turn_helix multiple antibiotic resistance protein
AT706_15915	SM00331	Sigma factor PP2C-like phosphatases
AT706_15915	SM00332	Serine/threonine phosphatases, family 2C, catalytic domain
AT706_15935	SM00331	Sigma factor PP2C-like phosphatases
AT706_15940	SM00387	Histidine kinase-like ATPases
AT706_15965	SM01005	Alanine racemase, C-terminal domain
AT706_15995	SM00487	DEAD-like helicases superfamily
AT706_15995	SM00490	helicase superfamily c-terminal domain
AT706_16045	SM00382	ATPases associated with a variety of cellular activities
AT706_16065	SM00448	cheY-homologous receiver domain
AT706_16070	SM00091	PAS domain
AT706_16070	SM00387	Histidine kinase-like ATPases
AT706_16160	SM00267	diguanylate cyclase
AT706_16170	SM00436	Bacterial DNA topoisomeraes I ATP-binding domain
AT706_16170	SM00437	Bacterial DNA topoisomerase I DNA-binding domain
AT706_16170	SM00493	AT706_16170
AT706_16175	SM00344	helix_turn_helix ASNC type
AT706_16250	SM00346	helix_turn_helix isocitrate lyase regulation
AT706_16255	SM00797	Allophanate hydrolase subunit 2
AT706_16260	SM00796	Allophanate hydrolase subunit 1
AT706_16305	SM01329	AT706_16305
AT706_16330	SM00420	helix_turn_helix, Deoxyribose operon repressor
AT706_16365	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AT706_16370	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
AT706_16400	SM00382	ATPases associated with a variety of cellular activities
AT706_16430	SM00028	Tetratricopeptide repeats
AT706_16435	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AT706_16435	SM00387	Histidine kinase-like ATPases
AT706_16435	SM00388	His Kinase A (phosphoacceptor) domain
AT706_16440	SM00448	cheY-homologous receiver domain
AT706_16440	SM00862	Transcriptional regulatory protein, C terminal
AT706_16450	SM00382	ATPases associated with a variety of cellular activities
AT706_16475	SM00710	Parallel beta-helix repeats
AT706_16475	SM00722	Domain present in carbohydrate binding proteins and sugar hydrolses
AT706_16515	SM00062	Bacterial periplasmic substrate-binding proteins
AT706_16525	SM00382	ATPases associated with a variety of cellular activities
AT706_16540	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AT706_16565	SM00823	Phosphopantetheine attachment site
AT706_16570	SM00823	Phosphopantetheine attachment site
AT706_16570	SM01294	AT706_16570
AT706_16575	SM00823	Phosphopantetheine attachment site
AT706_16575	SM01294	AT706_16575
AT706_16590	SM00934	Orotidine 5'-phosphate decarboxylase / HUMPS family
AT706_16600	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
AT706_16600	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AT706_16635	SM00062	Bacterial periplasmic substrate-binding proteins
AT706_16645	SM00833	Cobalamin synthesis protein cobW C-terminal domain
AT706_16675	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
AT706_16790	SM00347	helix_turn_helix multiple antibiotic resistance protein
AT706_16810	SM00632	AT706_16810
AT706_16810	SM00642	Alpha-amylase domain
AT706_16845	SM00116	Domain in cystathionine beta-synthase and other proteins.
AT706_16845	SM00382	ATPases associated with a variety of cellular activities
AT706_16850	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
AT706_16905	SM00382	ATPases associated with a variety of cellular activities
AT706_16915	SM00642	Alpha-amylase domain
AT706_16925	SM00028	Tetratricopeptide repeats
AT706_16960	SM00382	ATPases associated with a variety of cellular activities
AT706_16965	SM00448	cheY-homologous receiver domain
AT706_16965	SM00850	LytTr DNA-binding domain
AT706_16970	SM00387	Histidine kinase-like ATPases
AT706_16990	SM00870	AT706_16990
AT706_17035	SM00327	von Willebrand factor (vWF) type A domain
AT706_17060	SM00382	ATPases associated with a variety of cellular activities
AT706_17065	SM00387	Histidine kinase-like ATPases
AT706_17065	SM00388	His Kinase A (phosphoacceptor) domain
AT706_17070	SM00448	cheY-homologous receiver domain
AT706_17070	SM00862	Transcriptional regulatory protein, C terminal
AT706_17090	SM00858	AT706_17090
AT706_17095	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AT706_17095	SM00895	AT706_17095
AT706_17100	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
AT706_17115	SM01130	AT706_17115
AT706_17120	SM00448	cheY-homologous receiver domain
AT706_17125	SM00387	Histidine kinase-like ATPases
AT706_17165	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AT706_17165	SM00866	AT706_17165
AT706_17185	SM00450	Rhodanese Homology Domain
AT706_17245	SM00342	helix_turn_helix, arabinose operon control protein
AT706_17265	SM00347	helix_turn_helix multiple antibiotic resistance protein
AT706_17340	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AT706_17340	SM00388	His Kinase A (phosphoacceptor) domain
AT706_17345	SM00448	cheY-homologous receiver domain
AT706_17345	SM00862	Transcriptional regulatory protein, C terminal
AT706_17370	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
AT706_17405	SM00014	Acid phosphatase homologues
AT706_17505	SM00342	helix_turn_helix, arabinose operon control protein
AT706_17625	SM01251	AT706_17625
AT706_17640	SM00646	AT706_17640
AT706_17675	SM00382	ATPases associated with a variety of cellular activities
AT706_17680	SM00382	ATPases associated with a variety of cellular activities
AT706_17690	SM00662	RNA polymerases D
AT706_17710	SM00316	Ribosomal protein S1-like RNA-binding domain
AT706_17775	SM00739	KOW (Kyprides, Ouzounis, Woese) motif.
AT706_17780	SM01374	AT706_17780
AT706_17800	SM00322	K homology RNA-binding domain
AT706_17815	SM01382	AT706_17815
AT706_17815	SM01383	AT706_17815
AT706_17835	SM01403	AT706_17835
AT706_17850	SM00838	Elongation factor G C-terminus
AT706_17850	SM00889	Elongation factor G, domain IV
AT706_17870	SM00663	RNA polymerase I subunit A N-terminus
AT706_17900	SM00649	Ribosomal protein L11/L12
AT706_17905	SM00738	In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold.
AT706_17905	SM00739	KOW (Kyprides, Ouzounis, Woese) motif.
AT706_17930	SM00967	RNA 2'-O ribose methyltransferase substrate binding
AT706_17935	SM00535	Ribonuclease III family
AT706_17940	SM00840	AT706_17940
AT706_17970	SM00670	Large family of predicted nucleotide-binding domains
AT706_17980	SM00382	ATPases associated with a variety of cellular activities
AT706_17985	SM00382	ATPases associated with a variety of cellular activities
AT706_17985	SM01086	C-terminal, D2-small domain, of ClpB protein
AT706_18095	SM00530	Helix-turn-helix XRE-family like proteins 
AT706_18105	SM00905	Dihydroneopterin aldolase
AT706_18150	SM00382	ATPases associated with a variety of cellular activities
AT706_18160	SM00977	TilS substrate C-terminal domain
AT706_18165	SM00220	Serine/Threonine protein kinases, catalytic domain
AT706_18175	SM00331	Sigma factor PP2C-like phosphatases
AT706_18175	SM00332	Serine/threonine phosphatases, family 2C, catalytic domain
AT706_18190	SM00316	Ribosomal protein S1-like RNA-binding domain
AT706_18210	SM00363	S4 RNA-binding domain
AT706_18225	SM00966	SpoVT / AbrB like domain 
AT706_18230	SM00487	DEAD-like helicases superfamily
AT706_18230	SM00490	helicase superfamily c-terminal domain
AT706_18230	SM00982	AT706_18230
AT706_18230	SM01058	CarD-like/TRCF domain
AT706_18250	SM01400	AT706_18250
AT706_18300	SM00650	Ribosomal RNA adenine dimethylases
AT706_18305	SM00493	AT706_18305
AT706_18310	SM01208	AT706_18310
AT706_18325	SM00966	SpoVT / AbrB like domain 
AT706_18335	SM00465	GIY-YIG type nucleases (URI domain)
AT706_18430	SM00493	AT706_18430
AT706_18440	SM00382	ATPases associated with a variety of cellular activities
AT706_18455	SM00257	Lysin motif
AT706_18455	SM00636	AT706_18455
AT706_18490	SM00936	Penicillin-binding protein 5, C-terminal domain 
AT706_18495	SM00116	Domain in cystathionine beta-synthase and other proteins.
AT706_18495	SM01240	AT706_18495
AT706_18530	SM00434	DNA Topoisomerase IV
AT706_18535	SM00387	Histidine kinase-like ATPases
AT706_18535	SM00433	TopoisomeraseII
AT706_18555	SM00480	DNA polymerase III beta subunit
AT706_18560	SM00382	ATPases associated with a variety of cellular activities
AT706_18560	SM00760	Bacterial dnaA protein helix-turn-helix domain
AT706_18580	SM00322	K homology RNA-binding domain
AT706_18580	SM00393	Putative single-stranded nucleic acids-binding domain
AT706_18580	SM01245	AT706_18580
AT706_18590	SM01228	AT706_18590
AT706_18600	SM00470	ParB-like nuclease domain
AT706_18615	SM00470	ParB-like nuclease domain
AT706_18635	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
AT706_18665	SM00354	helix_turn _helix lactose operon repressor
AT706_18675	SM01266	AT706_18675
AT706_18710	SM00825	Beta-ketoacyl synthase
AT706_18715	SM00530	Helix-turn-helix XRE-family like proteins 
AT706_18720	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
AT706_18735	SM00226	Low molecular weight phosphatase family
AT706_18770	SM00347	helix_turn_helix multiple antibiotic resistance protein
AT706_18775	SM00849	Metallo-beta-lactamase superfamily
AT706_18830	SM00422	helix_turn_helix, mercury resistance
AT706_18850	SM01131	AT706_18850
AT706_18875	SM00267	diguanylate cyclase
AT706_18915	SM00382	ATPases associated with a variety of cellular activities
AT706_18925	SM00788	Adenylosuccinate synthetase
AT706_18950	SM00448	cheY-homologous receiver domain
AT706_18950	SM00862	Transcriptional regulatory protein, C terminal
AT706_18955	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
AT706_18955	SM00091	PAS domain
AT706_18955	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AT706_18955	SM00387	Histidine kinase-like ATPases
AT706_18955	SM00388	His Kinase A (phosphoacceptor) domain
AT706_18970	SM00849	Metallo-beta-lactamase superfamily
AT706_18975	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
AT706_18990	SM00091	PAS domain
AT706_18990	SM00382	ATPases associated with a variety of cellular activities
AT706_19080	SM00487	DEAD-like helicases superfamily
AT706_19090	SM00382	ATPases associated with a variety of cellular activities
AT706_19105	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AT706_19105	SM00866	AT706_19105
AT706_19135	SM01350	AT706_19135
AT706_19150	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AT706_19150	SM00895	AT706_19150
AT706_19175	SM00347	helix_turn_helix multiple antibiotic resistance protein
AT706_19210	SM00564	beta-propeller repeat
AT706_19240	SM00387	Histidine kinase-like ATPases
AT706_19265	SM00420	helix_turn_helix, Deoxyribose operon repressor
AT706_19265	SM01134	AT706_19265
AT706_19320	SM00448	cheY-homologous receiver domain
AT706_19320	SM00862	Transcriptional regulatory protein, C terminal
AT706_19325	SM00387	Histidine kinase-like ATPases
AT706_19330	SM00382	ATPases associated with a variety of cellular activities
AT706_19395	SM00062	Bacterial periplasmic substrate-binding proteins
AT706_19405	SM00382	ATPases associated with a variety of cellular activities
AT706_19435	SM01133	AT706_19435
AT706_19445	SM00941	Pyrimidine nucleoside phosphorylase C-terminal domain
AT706_19495	SM00487	DEAD-like helicases superfamily
AT706_19495	SM00490	helicase superfamily c-terminal domain
AT706_19600	SM00487	DEAD-like helicases superfamily
AT706_19600	SM00490	helicase superfamily c-terminal domain
AT706_19615	SM01061	CAT RNA binding domain
AT706_19630	SM01060	AT706_19630
AT706_19665	SM00882	Coenzyme A transferase
AT706_19670	SM00882	Coenzyme A transferase
AT706_19675	SM00822	AT706_19675
AT706_19710	SM00421	helix_turn_helix, Lux Regulon
AT706_19710	SM00448	cheY-homologous receiver domain
AT706_19760	SM00382	ATPases associated with a variety of cellular activities
AT706_19795	SM00382	ATPases associated with a variety of cellular activities
AT706_19800	SM00382	ATPases associated with a variety of cellular activities
AT706_19835	SM00382	ATPases associated with a variety of cellular activities
AT706_19850	SM01060	AT706_19850
AT706_19935	SM00954	Region found in RelA / SpoT proteins
AT706_19945	SM00363	S4 RNA-binding domain
AT706_19950	SM00347	helix_turn_helix multiple antibiotic resistance protein
AT706_19965	SM01061	CAT RNA binding domain
AT706_20000	SM00359	Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase
AT706_20150	SM01061	CAT RNA binding domain
AT706_20165	SM00640	Glycosyl hydrolases family 32
AT706_20185	SM00986	Uracil DNA glycosylase superfamily
AT706_20185	SM00987	UreE urease accessory protein, C-terminal domain 
AT706_20240	SM00858	AT706_20240
AT706_20280	SM00839	Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
AT706_20375	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
AT706_20400	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
AT706_20405	SM00347	helix_turn_helix multiple antibiotic resistance protein
AT706_20445	SM00382	ATPases associated with a variety of cellular activities
AT706_20475	SM00028	Tetratricopeptide repeats
AT706_20525	SM00729	Elongator protein 3, MiaB family, Radical SAM
AT706_20540	SM00836	DALR anticodon binding domain
AT706_20540	SM01016	Arginyl tRNA synthetase N terminal dom
AT706_20550	SM00100	Cyclic nucleotide-monophosphate binding domain
AT706_20550	SM00419	helix_turn_helix, cAMP Regulatory protein
AT706_20565	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
AT706_20590	SM00155	Phospholipase D. Active site motifs.
AT706_20595	SM00382	ATPases associated with a variety of cellular activities
AT706_20615	SM00155	Phospholipase D. Active site motifs.
AT706_20645	SM00448	cheY-homologous receiver domain
