locus-tag class description D9C11_00010 PF02557 D-alanyl-D-alanine carboxypeptidase D9C11_00015 PF01048 Phosphorylase superfamily D9C11_00025 PF14191 YodL-like D9C11_00030 PF01569 PAP2 superfamily D9C11_00035 PF14162 YozD-like protein D9C11_00055 PF06855 YozE SAM-like fold D9C11_00060 PF14122 YokU-like protein, putative antitoxin D9C11_00100 PF01471 Putative peptidoglycan binding domain D9C11_00100 PF01510 N-acetylmuramoyl-L-alanine amidase D9C11_00115 PF18801 response regulator aspartate phosphatase H, N terminal D9C11_00125 PF11798 IMS family HHH motif D9C11_00125 PF11799 impB/mucB/samB family C-terminal domain D9C11_00125 PF00817 impB/mucB/samB family D9C11_00130 PF01348 Type II intron maturase D9C11_00130 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) D9C11_00140 PF08863 YolD-like protein D9C11_00160 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) D9C11_00165 PF13302 Acetyltransferase (GNAT) domain D9C11_00180 PF04740 LXG domain of WXG superfamily D9C11_00180 PF15652 HNH/Endo VII superfamily toxin with a SHH signature D9C11_00190 PF00239 Resolvase, N terminal domain D9C11_00190 PF07508 Recombinase D9C11_00195 PF02719 Polysaccharide biosynthesis protein D9C11_00200 PF01641 SelR domain D9C11_00205 PF01625 Peptide methionine sulfoxide reductase D9C11_00210 PF01047 MarR family D9C11_00215 PF01554 MatE D9C11_00220 PF17431 Uncharacterized YmpT-like D9C11_00225 PF09911 Uncharacterized protein conserved in bacteria (DUF2140) D9C11_00230 PF13472 GDSL-like Lipase/Acylhydrolase family D9C11_00235 PF02630 SCO1/SenC D9C11_00240 PF10751 Protein of unknown function (DUF2535) D9C11_00245 PF00585 C-terminal regulatory domain of Threonine dehydratase D9C11_00245 PF00291 Pyridoxal-phosphate dependent enzyme D9C11_00250 PF08461 Ribonuclease R winged-helix domain D9C11_00250 PF00158 Sigma-54 interaction domain D9C11_00255 PF03006 Haemolysin-III related D9C11_00265 PF00186 Dihydrofolate reductase D9C11_00270 PF04608 Phosphatidylglycerophosphatase A D9C11_00275 PF14005 YpjP-like protein D9C11_00280 PF04445 Putative SAM-dependent methyltransferase D9C11_00285 PF06491 Disulphide isomerase D9C11_00290 PF00920 Dehydratase family D9C11_00295 PF13769 Virulence factor D9C11_00295 PF08712 Scaffold protein Nfu/NifU N terminal D9C11_00300 PF01966 HD domain D9C11_00305 PF00255 Glutathione peroxidase D9C11_00310 PF04204 Homoserine O-succinyltransferase D9C11_00315 PF00534 Glycosyl transferases group 1 D9C11_00315 PF06925 Monogalactosyldiacylglycerol (MGDG) synthase D9C11_00325 PF00313 'Cold-shock' DNA-binding domain D9C11_00335 PF10819 Protein of unknown function (DUF2564) D9C11_00340 PF10782 Zinc-finger D9C11_00345 PF13456 Reverse transcriptase-like D9C11_00350 PF02592 Putative vitamin uptake transporter D9C11_00355 PF13456 Reverse transcriptase-like D9C11_00365 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain D9C11_00365 PF01367 5'-3' exonuclease, C-terminal SAM fold D9C11_00385 PF10752 Protein of unknown function (DUF2533) D9C11_00390 PF00350 Dynamin family D9C11_00400 PF04140 Isoprenylcysteine carboxyl methyltransferase (ICMT) family D9C11_00460 PF01510 N-acetylmuramoyl-L-alanine amidase D9C11_00465 PF04688 SPP1 phage holin D9C11_00560 PF00574 Clp protease D9C11_00640 PF00156 Phosphoribosyl transferase domain D9C11_00645 PF02074 Carboxypeptidase Taq (M32) metallopeptidase D9C11_00650 PF03812 2-keto-3-deoxygluconate permease D9C11_00655 PF01081 KDPG and KHG aldolase D9C11_00660 PF00294 pfkB family carbohydrate kinase D9C11_00665 PF00356 Bacterial regulatory proteins, lacI family D9C11_00670 PF04962 KduI/IolB family D9C11_00680 PF13307 Helicase C-terminal domain D9C11_00690 PF14139 YpzG-like protein D9C11_00695 PF02926 THUMP domain D9C11_00695 PF01170 Putative RNA methylase family UPF0020 D9C11_00705 PF05103 DivIVA protein D9C11_00710 PF06908 YspA SLOG family D9C11_00715 PF11122 Inner spore coat protein D D9C11_00725 PF13482 RNase_H superfamily D9C11_00730 PF00271 Helicase conserved C-terminal domain D9C11_00730 PF09369 Domain of unknown function (DUF1998) D9C11_00730 PF00270 DEAD/DEAH box helicase D9C11_00735 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 D9C11_00745 PF14179 YppG-like protein D9C11_00750 PF14178 YppF-like protein D9C11_00755 PF08807 Bacterial domain of unknown function (DUF1798) D9C11_00760 PF17522 Family of unknown function (DUF5446) D9C11_00770 PF10720 Protein of unknown function (DUF2515) D9C11_00775 PF03838 Recombination protein U D9C11_00780 PF00912 Transglycosylase D9C11_00780 PF00905 Penicillin binding protein transpeptidase domain D9C11_00790 PF10576 Iron-sulfur binding domain of endonuclease III D9C11_00790 PF00633 Helix-hairpin-helix motif D9C11_00790 PF00730 HhH-GPD superfamily base excision DNA repair protein D9C11_00795 PF07261 Replication initiation and membrane attachment D9C11_00800 PF01336 OB-fold nucleic acid binding domain D9C11_00800 PF00152 tRNA synthetases class II (D, K and N) D9C11_00805 PF00155 Aminotransferase class I and II D9C11_00810 PF03413 Peptidase propeptide and YPEB domain D9C11_00810 PF17881 Domain of unknown function (DUF5590) D9C11_00815 PF14084 Protein of unknown function (DUF4264) D9C11_00820 PF00929 Exonuclease D9C11_00820 PF13307 Helicase C-terminal domain D9C11_00820 PF04851 Type III restriction enzyme, res subunit D9C11_00825 PF02261 Aspartate decarboxylase D9C11_00830 PF02569 Pantoate-beta-alanine ligase D9C11_00835 PF02548 Ketopantoate hydroxymethyltransferase D9C11_00840 PF02237 Biotin protein ligase C terminal domain D9C11_00840 PF03099 Biotin/lipoate A/B protein ligase family D9C11_00840 PF08279 HTH domain D9C11_00845 PF01743 Poly A polymerase head domain D9C11_00845 PF12627 Probable RNA and SrmB- binding site of polymerase A D9C11_00845 PF13735 tRNA nucleotidyltransferase domain 2 putative D9C11_00850 PF13439 Glycosyltransferase Family 4 D9C11_00850 PF00534 Glycosyl transferases group 1 D9C11_00855 PF02585 GlcNAc-PI de-N-acetylase D9C11_00860 PF02142 MGS-like domain D9C11_00865 PF05173 Dihydrodipicolinate reductase, C-terminus D9C11_00865 PF01113 Dihydrodipicolinate reductase, N-terminus D9C11_00870 PF03819 MazG nucleotide pyrophosphohydrolase domain D9C11_00875 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 D9C11_00875 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) D9C11_00880 PF09577 Sporulation protein YpjB (SpoYpjB) D9C11_00885 PF07187 Protein of unknown function (DUF1405) D9C11_00890 PF00032 Cytochrome b(C-terminal)/b6/petD D9C11_00890 PF13442 Cytochrome C oxidase, cbb3-type, subunit III D9C11_00895 PF00033 Cytochrome b/b6/petB D9C11_00900 PF00355 Rieske [2Fe-2S] domain D9C11_00905 PF10673 Protein of unknown function (DUF2487) D9C11_00910 PF08864 UPF0302 domain D9C11_00910 PF08858 IDEAL domain D9C11_00920 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) D9C11_00925 PF01842 ACT domain D9C11_00925 PF02153 Prephenate dehydrogenase D9C11_00930 PF00155 Aminotransferase class I and II D9C11_00935 PF00290 Tryptophan synthase alpha chain D9C11_00940 PF00291 Pyridoxal-phosphate dependent enzyme D9C11_00945 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase D9C11_00950 PF00218 Indole-3-glycerol phosphate synthase D9C11_00955 PF00591 Glycosyl transferase family, a/b domain D9C11_00955 PF02885 Glycosyl transferase family, helical bundle domain D9C11_00960 PF00425 chorismate binding enzyme D9C11_00960 PF04715 Anthranilate synthase component I, N terminal region D9C11_00965 PF07736 Chorismate mutase type I D9C11_00970 PF01761 3-dehydroquinate synthase D9C11_00975 PF01264 Chorismate synthase D9C11_00980 PF03705 CheR methyltransferase, all-alpha domain D9C11_00980 PF01739 CheR methyltransferase, SAM binding domain D9C11_00985 PF00334 Nucleoside diphosphate kinase D9C11_00990 PF00348 Polyprenyl synthetase D9C11_00995 PF01209 ubiE/COQ5 methyltransferase family D9C11_01000 PF07307 Heptaprenyl diphosphate synthase (HEPPP synthase) subunit 1 D9C11_01005 PF02081 Tryptophan RNA-binding attenuator protein D9C11_01010 PF01227 GTP cyclohydrolase I D9C11_01015 PF00216 Bacterial DNA-binding protein D9C11_01020 PF09547 Stage IV sporulation protein A (spore_IV_A) D9C11_01030 PF10966 Protein of unknown function (DUF2768) D9C11_01035 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus D9C11_01035 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus D9C11_01040 PF01926 50S ribosome-binding GTPase D9C11_01040 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal D9C11_01050 PF14045 YIEGIA protein D9C11_01060 PF14140 YpzI-like protein D9C11_01070 PF01070 FMN-dependent dehydrogenase D9C11_01075 PF00575 S1 RNA binding domain D9C11_01080 PF02224 Cytidylate kinase D9C11_01085 PF17313 Family of unknown function (DUF5359) D9C11_01090 PF12945 Flagellar protein YcgR D9C11_01090 PF07238 PilZ domain D9C11_01095 PF14620 YpeB sporulation D9C11_01095 PF03413 Peptidase propeptide and YPEB domain D9C11_01100 PF01471 Putative peptidoglycan binding domain D9C11_01100 PF07486 Cell Wall Hydrolase D9C11_01105 PF13367 PrsW family intramembrane metalloprotease D9C11_01115 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain D9C11_01115 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase D9C11_01120 PF05389 Negative regulator of genetic competence (MecA) D9C11_01125 PF00149 Calcineurin-like phosphoesterase D9C11_01130 PF10864 Protein of unknown function (DUF2663) D9C11_01135 PF01476 LysM domain D9C11_01140 PF02517 CPBP intramembrane metalloprotease D9C11_01145 PF00271 Helicase conserved C-terminal domain D9C11_01145 PF00270 DEAD/DEAH box helicase D9C11_01150 PF14493 Helix-turn-helix domain D9C11_01160 PF12822 ECF transporter, substrate-specific component D9C11_01165 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain D9C11_01165 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain D9C11_01165 PF01842 ACT domain D9C11_01175 PF01487 Type I 3-dehydroquinase D9C11_01185 PF04542 Sigma-70 region 2 D9C11_01185 PF08281 Sigma-70, region 4 D9C11_01190 PF18698 Histidine kinase sensor domain D9C11_01190 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D9C11_01190 PF00672 HAMP domain D9C11_01190 PF00512 His Kinase A (phospho-acceptor) domain D9C11_01190 PF00989 PAS fold D9C11_01195 PF00072 Response regulator receiver domain D9C11_01195 PF00486 Transcriptional regulatory protein, C terminal D9C11_01200 PF01578 Cytochrome C assembly protein D9C11_01205 PF05140 ResB-like family D9C11_01210 PF00578 AhpC/TSA family D9C11_01215 PF00849 RNA pseudouridylate synthase D9C11_01215 PF01479 S4 domain D9C11_01220 PF07670 Nucleoside recognition D9C11_01225 PF07670 Nucleoside recognition D9C11_01230 PF00768 D-alanyl-D-alanine carboxypeptidase D9C11_01230 PF07943 Penicillin-binding protein 5, C-terminal domain D9C11_01235 PF13047 Protein of unknown function (DUF3907) D9C11_01240 PF04079 Segregation and condensation complex subunit ScpB D9C11_01245 PF02616 Segregation and condensation protein ScpA D9C11_01250 PF03745 Domain of unknown function (DUF309) D9C11_01255 PF00583 Acetyltransferase (GNAT) family D9C11_01260 PF00885 6,7-dimethyl-8-ribityllumazine synthase D9C11_01265 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase D9C11_01265 PF00925 GTP cyclohydrolase II D9C11_01270 PF00677 Lumazine binding domain D9C11_01275 PF01872 RibD C-terminal domain D9C11_01275 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region D9C11_01285 PF10502 Signal peptidase, peptidase S26 D9C11_01295 PF09855 Nucleic-acid-binding protein containing Zn-ribbon domain (DUF2082) D9C11_01320 PF10676 Spore germination protein gerPA/gerPF D9C11_01325 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD D9C11_01335 PF06207 Protein of unknown function (DUF1002) D9C11_01350 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain D9C11_01350 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain D9C11_01355 PF03323 Bacillus/Clostridium GerA spore germination protein D9C11_01360 PF14097 Stage V sporulation protein AE1 D9C11_01365 PF03862 SpoVAC/SpoVAEB sporulation membrane protein D9C11_01370 PF07451 Stage V sporulation protein AD (SpoVAD) D9C11_01375 PF03862 SpoVAC/SpoVAEB sporulation membrane protein D9C11_01380 PF13782 Stage V sporulation protein AB D9C11_01385 PF12164 Stage V sporulation protein AA D9C11_01390 PF04539 Sigma-70 region 3 D9C11_01390 PF04542 Sigma-70 region 2 D9C11_01390 PF04545 Sigma-70, region 4 D9C11_01395 PF13581 Histidine kinase-like ATPase domain D9C11_01400 PF01740 STAS domain D9C11_01405 PF00768 D-alanyl-D-alanine carboxypeptidase D9C11_01405 PF07943 Penicillin-binding protein 5, C-terminal domain D9C11_01410 PF01048 Phosphorylase superfamily D9C11_01415 PF01676 Metalloenzyme superfamily D9C11_01420 PF02899 Phage integrase, N-terminal SAM-like domain D9C11_01420 PF00589 Phage integrase family D9C11_01425 PF14004 Protein of unknown function (DUF4227) D9C11_01430 PF01475 Ferric uptake regulator family D9C11_01435 PF01944 Stage II sporulation protein M D9C11_01445 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain D9C11_01445 PF00390 Malic enzyme, N-terminal domain D9C11_01445 PF03949 Malic enzyme, NAD binding domain D9C11_01450 PF03553 Na+/H+ antiporter family D9C11_01455 PF00206 Lyase D9C11_01455 PF10415 Fumarase C C-terminus D9C11_01460 PF17763 Glutaminase/Asparaginase C-terminal domain D9C11_01460 PF00710 Asparaginase, N-terminal D9C11_01465 PF01381 Helix-turn-helix D9C11_01475 PF00293 NUDIX domain D9C11_01480 PF13072 Mother cell inhibitor of FtsZ D9C11_01485 PF00248 Aldo/keto reductase family D9C11_01495 PF00872 Transposase, Mutator family D9C11_01505 PF12146 Serine aminopeptidase, S33 D9C11_01510 PF10827 Protein of unknown function (DUF2552) D9C11_01515 PF01521 Iron-sulphur cluster biosynthesis D9C11_01520 PF13673 Acetyltransferase (GNAT) domain D9C11_01520 PF04229 GrpB protein D9C11_01525 PF03992 Antibiotic biosynthesis monooxygenase D9C11_01530 PF00583 Acetyltransferase (GNAT) family D9C11_01535 PF08863 YolD-like protein D9C11_01540 PF00817 impB/mucB/samB family D9C11_01540 PF11799 impB/mucB/samB family C-terminal domain D9C11_01545 PF14164 YqzH-like protein D9C11_01560 PF00485 Phosphoribulokinase / Uridine kinase family D9C11_01570 PF00106 short chain dehydrogenase D9C11_01575 PF00753 Metallo-beta-lactamase superfamily D9C11_01580 PF03807 NADP oxidoreductase coenzyme F420-dependent D9C11_01580 PF14748 Pyrroline-5-carboxylate reductase dimerisation D9C11_01585 PF01546 Peptidase family M20/M25/M40 D9C11_01590 PF00724 NADH:flavin oxidoreductase / NADH oxidase family D9C11_01595 PF12146 Serine aminopeptidase, S33 D9C11_01600 PF00471 Ribosomal protein L33 D9C11_01605 PF12706 Beta-lactamase superfamily domain D9C11_01610 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain D9C11_01610 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain D9C11_01615 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain D9C11_01615 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase D9C11_01620 PF11799 impB/mucB/samB family C-terminal domain D9C11_01620 PF11798 IMS family HHH motif D9C11_01620 PF00817 impB/mucB/samB family D9C11_01630 PF02096 60Kd inner membrane protein D9C11_01635 PF09844 Uncharacterized conserved protein (COG2071) D9C11_01645 PF01546 Peptidase family M20/M25/M40 D9C11_01645 PF07687 Peptidase dimerisation domain D9C11_01660 PF03734 L,D-transpeptidase catalytic domain D9C11_01665 PF11728 Putative aromatic acid exporter C-terminal domain D9C11_01665 PF06081 Aromatic acid exporter family member 1 D9C11_01670 PF00005 ABC transporter D9C11_01675 PF00528 Binding-protein-dependent transport system inner membrane component D9C11_01680 PF00497 Bacterial extracellular solute-binding proteins, family 3 D9C11_01685 PF06491 Disulphide isomerase D9C11_01690 PF00781 Diacylglycerol kinase catalytic domain D9C11_01700 PF06445 GyrI-like small molecule binding domain D9C11_01700 PF13411 MerR HTH family regulatory protein D9C11_01705 PF02817 e3 binding domain D9C11_01705 PF00364 Biotin-requiring enzyme D9C11_01705 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) D9C11_01710 PF02779 Transketolase, pyrimidine binding domain D9C11_01710 PF02780 Transketolase, C-terminal domain D9C11_01715 PF00676 Dehydrogenase E1 component D9C11_01720 PF07992 Pyridine nucleotide-disulphide oxidoreductase D9C11_01720 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain D9C11_01725 PF00871 Acetokinase family D9C11_01730 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase D9C11_01730 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain D9C11_01735 PF01515 Phosphate acetyl/butaryl transferase D9C11_01740 PF00158 Sigma-54 interaction domain D9C11_01740 PF00989 PAS fold D9C11_01740 PF02954 Bacterial regulatory protein, Fis family D9C11_01745 PF11118 Protein of unknown function (DUF2627) D9C11_01755 PF03972 MmgE/PrpD family D9C11_01760 PF00285 Citrate synthase, C-terminal domain D9C11_01765 PF02771 Acyl-CoA dehydrogenase, N-terminal domain D9C11_01765 PF00441 Acyl-CoA dehydrogenase, C-terminal domain D9C11_01765 PF02770 Acyl-CoA dehydrogenase, middle domain D9C11_01770 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain D9C11_01770 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain D9C11_01780 PF03009 Glycerophosphoryl diester phosphodiesterase family D9C11_01785 PF01520 N-acetylmuramoyl-L-alanine amidase D9C11_01800 PF00724 NADH:flavin oxidoreductase / NADH oxidase family D9C11_01805 PF08769 Sporulation initiation factor Spo0A C terminal D9C11_01805 PF00072 Response regulator receiver domain D9C11_01815 PF05580 SpoIVB peptidase S55 D9C11_01815 PF17820 PDZ domain D9C11_01820 PF13476 AAA domain D9C11_01825 PF02863 Arginine repressor, C-terminal domain D9C11_01825 PF01316 Arginine repressor, DNA binding domain D9C11_01830 PF01728 FtsJ-like methyltransferase D9C11_01830 PF01479 S4 domain D9C11_01835 PF13292 1-deoxy-D-xylulose-5-phosphate synthase D9C11_01835 PF02779 Transketolase, pyrimidine binding domain D9C11_01835 PF02780 Transketolase, C-terminal domain D9C11_01840 PF00348 Polyprenyl synthetase D9C11_01845 PF02609 Exonuclease VII small subunit D9C11_01850 PF02601 Exonuclease VII, large subunit D9C11_01850 PF13742 OB-fold nucleic acid binding domain D9C11_01855 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain D9C11_01855 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain D9C11_01860 PF01029 NusB family D9C11_01865 PF03780 Asp23 family, cell envelope-related function D9C11_01870 PF02785 Biotin carboxylase C-terminal domain D9C11_01870 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain D9C11_01870 PF00289 Biotin carboxylase, N-terminal domain D9C11_01875 PF00364 Biotin-requiring enzyme D9C11_01880 PF12685 SpoIIIAH-like protein D9C11_01890 PF09581 Stage III sporulation protein AF (Spore_III_AF) D9C11_01895 PF09546 Stage III sporulation protein AE (spore_III_AE) D9C11_01900 PF06686 Stage III sporulation protein AC/AD protein family D9C11_01905 PF06686 Stage III sporulation protein AC/AD protein family D9C11_01910 PF09548 Stage III sporulation protein AB (spore_III_AB) D9C11_01920 PF10942 Protein of unknown function (DUF2619) D9C11_01925 PF08207 Elongation factor P (EF-P) KOW-like domain D9C11_01925 PF01132 Elongation factor P (EF-P) OB domain D9C11_01925 PF09285 Elongation factor P, C-terminal D9C11_01930 PF01321 Creatinase/Prolidase N-terminal domain D9C11_01930 PF00557 Metallopeptidase family M24 D9C11_01935 PF01220 Dehydroquinase class II D9C11_01940 PF11085 Conserved membrane protein YqhR D9C11_01945 PF07136 Protein of unknown function (DUF1385) D9C11_01955 PF01734 Patatin-like phospholipase D9C11_01960 PF02742 Iron dependent repressor, metal binding and dimerisation domain D9C11_01960 PF01325 Iron dependent repressor, N-terminal DNA binding domain D9C11_01965 PF03099 Biotin/lipoate A/B protein ligase family D9C11_01970 PF00581 Rhodanese-like domain D9C11_01975 PF02347 Glycine cleavage system P-protein D9C11_01980 PF02347 Glycine cleavage system P-protein D9C11_01985 PF08669 Glycine cleavage T-protein C-terminal barrel domain D9C11_01985 PF01571 Aminomethyltransferase folate-binding domain D9C11_01990 PF00176 SNF2 family N-terminal domain D9C11_01990 PF00271 Helicase conserved C-terminal domain D9C11_01995 PF11079 Bacterial protein YqhG of unknown function D9C11_02000 PF08671 Anti-repressor SinI D9C11_02005 PF01381 Helix-turn-helix D9C11_02005 PF08671 Anti-repressor SinI D9C11_02010 PF12389 Camelysin metallo-endopeptidase D9C11_02025 PF01609 Transposase DDE domain D9C11_02035 PF13028 Protein of unknown function (DUF3889) D9C11_02040 PF14038 YqzE-like protein D9C11_02045 PF14173 ComG operon protein 7 D9C11_02050 PF15980 Putative Competence protein ComGF D9C11_02060 PF07963 Prokaryotic N-terminal methylation motif D9C11_02065 PF07963 Prokaryotic N-terminal methylation motif D9C11_02070 PF00482 Type II secretion system (T2SS), protein F D9C11_02075 PF00437 Type II/IV secretion system protein D9C11_02090 PF00571 CBS domain D9C11_02090 PF01595 Cyclin M transmembrane N-terminal domain D9C11_02090 PF03471 Transporter associated domain D9C11_02095 PF14361 RsbT co-antagonist protein rsbRD N-terminal domain D9C11_02095 PF01740 STAS domain D9C11_02105 PF03960 ArsC family D9C11_02110 PF11117 Protein of unknown function (DUF2626) D9C11_02115 PF00753 Metallo-beta-lactamase superfamily D9C11_02120 PF10958 Protein of unknown function (DUF2759) D9C11_02125 PF01910 Thiamine-binding protein D9C11_02135 PF00246 Zinc carboxypeptidase D9C11_02140 PF00884 Sulfatase D9C11_02150 PF06014 Bacterial protein of unknown function (DUF910) D9C11_02155 PF01694 Rhomboid family D9C11_02165 PF01812 5-formyltetrahydrofolate cyclo-ligase family D9C11_02170 PF00471 Ribosomal protein L33 D9C11_02175 PF13439 Glycosyltransferase Family 4 D9C11_02175 PF00534 Glycosyl transferases group 1 D9C11_02195 PF00005 ABC transporter D9C11_02200 PF00005 ABC transporter D9C11_02205 PF00528 Binding-protein-dependent transport system inner membrane component D9C11_02210 PF00528 Binding-protein-dependent transport system inner membrane component D9C11_02215 PF12849 PBP superfamily domain D9C11_02225 PF07690 Major Facilitator Superfamily D9C11_02230 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain D9C11_02230 PF02777 Iron/manganese superoxide dismutases, C-terminal domain D9C11_02235 PF04306 Protein of unknown function (DUF456) D9C11_02240 PF06691 Protein of unknown function (DUF1189) D9C11_02250 PF04551 GcpE protein D9C11_02265 PF01475 Ferric uptake regulator family D9C11_02270 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) D9C11_02270 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 D9C11_02275 PF11116 Protein of unknown function (DUF2624) D9C11_02280 PF01261 Xylose isomerase-like TIM barrel D9C11_02285 PF00271 Helicase conserved C-terminal domain D9C11_02285 PF00270 DEAD/DEAH box helicase D9C11_02290 PF14181 YqfQ-like protein D9C11_02295 PF02401 LytB protein D9C11_02300 PF01784 NIF3 (NGG1p interacting factor 3) D9C11_02305 PF04816 tRNA (adenine(22)-N(1))-methyltransferase D9C11_02310 PF13442 Cytochrome C oxidase, cbb3-type, subunit III D9C11_02320 PF04542 Sigma-70 region 2 D9C11_02320 PF04539 Sigma-70 region 3 D9C11_02320 PF03979 Sigma-70 factor, region 1.1 D9C11_02320 PF04545 Sigma-70, region 4 D9C11_02320 PF00140 Sigma-70 factor, region 1.2 D9C11_02325 PF08275 DNA primase catalytic core, N-terminal domain D9C11_02325 PF10410 DnaB-helicase binding domain of primase D9C11_02325 PF01807 CHC2 zinc finger D9C11_02330 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 D9C11_02335 PF03618 Kinase/pyrophosphorylase D9C11_02340 PF00571 CBS domain D9C11_02340 PF08279 HTH domain D9C11_02345 PF02092 Glycyl-tRNA synthetase beta subunit D9C11_02350 PF02091 Glycyl-tRNA synthetase alpha subunit D9C11_02355 PF11967 Recombination protein O N terminal D9C11_02355 PF02565 Recombination protein O C terminal D9C11_02360 PF14006 YqzL-like protein D9C11_02365 PF07650 KH domain D9C11_02365 PF01926 50S ribosome-binding GTPase D9C11_02370 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region D9C11_02375 PF01219 Prokaryotic diacylglycerol kinase D9C11_02380 PF02130 Uncharacterized protein family UPF0054 D9C11_02385 PF01966 HD domain D9C11_02385 PF07698 7TM receptor with intracellular HD hydrolase D9C11_02385 PF07697 7TM-HD extracellular D9C11_02390 PF02562 PhoH-like protein D9C11_02395 PF06898 Putative stage IV sporulation protein YqfD D9C11_02400 PF07873 YabP family D9C11_02410 PF12127 SigmaW regulon antibacterial D9C11_02415 PF01972 Serine dehydrogenase proteinase D9C11_02415 PF01957 NfeD-like C-terminal, partner-binding D9C11_02420 PF09424 Yqey-like protein D9C11_02425 PF01165 Ribosomal protein S21 D9C11_02430 PF02690 Na+/Pi-cotransporter D9C11_02440 PF00919 Uncharacterized protein family UPF0004 D9C11_02440 PF04055 Radical SAM superfamily D9C11_02440 PF01938 TRAM domain D9C11_02445 PF04452 RNA methyltransferase D9C11_02455 PF00226 DnaJ domain D9C11_02455 PF01556 DnaJ C terminal domain D9C11_02455 PF00684 DnaJ central domain D9C11_02460 PF00012 Hsp70 protein D9C11_02465 PF01025 GrpE D9C11_02470 PF01628 HrcA protein C terminal domain D9C11_02475 PF04055 Radical SAM superfamily D9C11_02475 PF06969 HemN C-terminal domain D9C11_02480 PF00679 Elongation factor G C-terminus D9C11_02480 PF06421 GTP-binding protein LepA C-terminus D9C11_02480 PF03144 Elongation factor Tu domain 2 D9C11_02480 PF00009 Elongation factor Tu GTP binding domain D9C11_02485 PF12438 Protein of unknown function (DUF3679) D9C11_02490 PF07454 Stage II sporulation protein P (SpoIIP) D9C11_02495 PF03418 Germination protease D9C11_02500 PF01649 Ribosomal protein S20 D9C11_02505 PF06144 DNA polymerase III, delta subunit D9C11_02515 PF14141 YqzM-like protein D9C11_02525 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region D9C11_02530 PF10531 SLBB domain D9C11_02535 PF14748 Pyrroline-5-carboxylate reductase dimerisation D9C11_02535 PF03807 NADP oxidoreductase coenzyme F420-dependent D9C11_02540 PF13649 Methyltransferase domain D9C11_02550 PF01966 HD domain D9C11_02555 PF01467 Cytidylyltransferase-like D9C11_02560 PF01985 CRS1 / YhbY (CRM) domain D9C11_02565 PF18317 Shikimate 5'-dehydrogenase C-terminal domain D9C11_02565 PF08501 Shikimate dehydrogenase substrate binding domain D9C11_02565 PF01488 Shikimate / quinate 5-dehydrogenase D9C11_02570 PF01926 50S ribosome-binding GTPase D9C11_02580 PF08970 Sporulation inhibitor A D9C11_02585 PF00657 GDSL-like Lipase/Acylhydrolase D9C11_02590 PF01471 Putative peptidoglycan binding domain D9C11_02590 PF01510 N-acetylmuramoyl-L-alanine amidase D9C11_02595 PF09335 SNARE associated Golgi protein D9C11_02600 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase D9C11_02600 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain D9C11_02610 PF14040 Deoxyribonuclease NucA/NucB D9C11_02615 PF04545 Sigma-70, region 4 D9C11_02615 PF04542 Sigma-70 region 2 D9C11_02625 PF00872 Transposase, Mutator family D9C11_02635 PF01206 Sulfurtransferase TusA D9C11_02640 PF00753 Metallo-beta-lactamase superfamily D9C11_02640 PF00581 Rhodanese-like domain D9C11_02650 PF00581 Rhodanese-like domain D9C11_02650 PF01206 Sulfurtransferase TusA D9C11_02660 PF13686 DsrE/DsrF/DrsH-like family D9C11_02665 PF02583 Metal-sensitive transcriptional repressor D9C11_02680 PF07883 Cupin domain D9C11_02695 PF13411 MerR HTH family regulatory protein D9C11_02695 PF06445 GyrI-like small molecule binding domain D9C11_02700 PF07690 Major Facilitator Superfamily D9C11_02705 PF00583 Acetyltransferase (GNAT) family D9C11_02715 PF14142 YrzO-like protein D9C11_02720 PF00892 EamA-like transporter family D9C11_02740 PF00665 Integrase core domain D9C11_02745 PF01695 IstB-like ATP binding protein D9C11_02760 PF16916 Dimerisation domain of Zinc Transporter D9C11_02760 PF01545 Cation efflux family D9C11_02770 PF05525 Branched-chain amino acid transport protein D9C11_02775 PF05437 Branched-chain amino acid transport protein (AzlD) D9C11_02785 PF01037 Lrp/AsnC ligand binding domain D9C11_02790 PF01337 Barstar (barnase inhibitor) D9C11_02795 PF00067 Cytochrome P450 D9C11_02820 PF07875 Coat F domain D9C11_02830 PF13411 MerR HTH family regulatory protein D9C11_02840 PF08240 Alcohol dehydrogenase GroES-like domain D9C11_02840 PF00107 Zinc-binding dehydrogenase D9C11_02845 PF01965 DJ-1/PfpI family D9C11_02850 PF00251 Glycosyl hydrolases family 32 N-terminal domain D9C11_02850 PF08244 Glycosyl hydrolases family 32 C terminal D9C11_02855 PF03613 PTS system mannose/fructose/sorbose family IID component D9C11_02860 PF03609 PTS system sorbose-specific iic component D9C11_02865 PF03830 PTS system sorbose subfamily IIB component D9C11_02870 PF03610 PTS system fructose IIA component D9C11_02875 PF00158 Sigma-54 interaction domain D9C11_02875 PF03610 PTS system fructose IIA component D9C11_02875 PF00874 PRD domain D9C11_02885 PF00324 Amino acid permease D9C11_02890 PF01810 LysE type translocator D9C11_02895 PF11495 Archaeal transcriptional regulator TrmB D9C11_02895 PF01978 Sugar-specific transcriptional regulator TrmB D9C11_02910 PF13739 Deacetylase PdaC D9C11_02910 PF11738 Protein of unknown function (DUF3298) D9C11_02920 PF14145 YrhK-like protein D9C11_02925 PF00667 FAD binding domain D9C11_02925 PF00175 Oxidoreductase NAD-binding domain D9C11_02925 PF00258 Flavodoxin D9C11_02925 PF00067 Cytochrome P450 D9C11_02930 PF00440 Bacterial regulatory proteins, tetR family D9C11_02930 PF16295 Tetracyclin repressor-like, C-terminal domain D9C11_02935 PF08241 Methyltransferase domain D9C11_02945 PF09501 Probable sporulation protein (Bac_small_yrzI) D9C11_02950 PF01226 Formate/nitrite transporter D9C11_02955 PF10057 Uncharacterized conserved protein (DUF2294) D9C11_02960 PF00384 Molybdopterin oxidoreductase D9C11_02960 PF00037 4Fe-4S binding domain D9C11_02960 PF04879 Molybdopterin oxidoreductase Fe4S4 domain D9C11_02960 PF01568 Molydopterin dinucleotide binding domain D9C11_02960 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region D9C11_02965 PF07849 Protein of unknown function (DUF1641) D9C11_02970 PF14143 YrhC-like protein D9C11_02975 PF01053 Cys/Met metabolism PLP-dependent enzyme D9C11_02980 PF00291 Pyridoxal-phosphate dependent enzyme D9C11_02985 PF01048 Phosphorylase superfamily D9C11_02990 PF13649 Methyltransferase domain D9C11_02995 PF10750 Protein of unknown function (DUF2536) D9C11_03000 PF07423 Domain of unknown function (DUF1510) D9C11_03005 PF00905 Penicillin binding protein transpeptidase domain D9C11_03005 PF03717 Penicillin-binding Protein dimerisation domain D9C11_03010 PF01272 Transcription elongation factor, GreA/GreB, C-term D9C11_03010 PF03449 Transcription elongation factor, N-terminal D9C11_03015 PF00485 Phosphoribulokinase / Uridine kinase family D9C11_03035 PF02618 YceG-like family D9C11_03040 PF06949 Protein of unknown function (DUF1292) D9C11_03045 PF03652 Holliday junction resolvase D9C11_03050 PF06135 IreB regulatory phosphoprotein D9C11_03055 PF02272 DHHA1 domain D9C11_03055 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain D9C11_03055 PF01411 tRNA synthetases class II (A) D9C11_03060 PF01594 AI-2E family transporter D9C11_03065 PF00005 ABC transporter D9C11_03070 PF00497 Bacterial extracellular solute-binding proteins, family 3 D9C11_03075 PF00528 Binding-protein-dependent transport system inner membrane component D9C11_03080 PF00528 Binding-protein-dependent transport system inner membrane component D9C11_03085 PF13056 Protein of unknown function (DUF3918) D9C11_03095 PF05239 PRC-barrel domain D9C11_03100 PF13538 UvrD-like helicase C-terminal domain D9C11_03100 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain D9C11_03100 PF14490 Helix-hairpin-helix containing domain D9C11_03105 PF07719 Tetratricopeptide repeat D9C11_03105 PF13181 Tetratricopeptide repeat D9C11_03115 PF00266 Aminotransferase class-V D9C11_03120 PF02082 Transcriptional regulator D9C11_03125 PF12002 MgsA AAA+ ATPase C terminal D9C11_03125 PF05496 Holliday junction DNA helicase RuvB P-loop domain D9C11_03125 PF16193 AAA C-terminal domain D9C11_03135 PF00899 ThiF family D9C11_03145 PF02938 GAD domain D9C11_03145 PF00152 tRNA synthetases class II (D, K and N) D9C11_03145 PF01336 OB-fold nucleic acid binding domain D9C11_03150 PF13393 Histidyl-tRNA synthetase D9C11_03150 PF03129 Anticodon binding domain D9C11_03155 PF17449 Uncharacterized YrzK-like D9C11_03160 PF08239 Bacterial SH3 domain D9C11_03160 PF01520 N-acetylmuramoyl-L-alanine amidase D9C11_03165 PF02580 D-Tyr-tRNA(Tyr) deacylase D9C11_03170 PF04607 Region found in RelA / SpoT proteins D9C11_03170 PF02824 TGS domain D9C11_03170 PF13291 ACT domain D9C11_03175 PF00156 Phosphoribosyl transferase domain D9C11_03180 PF10141 Single-strand DNA-specific exonuclease, C terminal domain D9C11_03180 PF17768 RecJ OB domain D9C11_03180 PF02272 DHHA1 domain D9C11_03180 PF01368 DHH family D9C11_03185 PF06305 Lipopolysaccharide assembly protein A domain D9C11_03190 PF02080 TrkA-C domain D9C11_03195 PF02355 Protein export membrane protein D9C11_03195 PF07549 SecD/SecF GG Motif D9C11_03200 PF13797 Post-transcriptional regulator D9C11_03205 PF14667 Polysaccharide biosynthesis C-terminal domain D9C11_03205 PF01943 Polysaccharide biosynthesis protein D9C11_03210 PF04239 Protein of unknown function (DUF421) D9C11_03215 PF12670 Protein of unknown function (DUF3792) D9C11_03225 PF02699 Preprotein translocase subunit D9C11_03230 PF01702 Queuine tRNA-ribosyltransferase D9C11_03235 PF02547 Queuosine biosynthesis protein D9C11_03240 PF11146 Protein of unknown function (DUF2905) D9C11_03245 PF05496 Holliday junction DNA helicase RuvB P-loop domain D9C11_03245 PF05491 RuvB C-terminal winged helix domain D9C11_03245 PF17864 RuvB AAA lid domain D9C11_03250 PF01330 RuvA N terminal domain D9C11_03250 PF07499 RuvA, C-terminal domain D9C11_03255 PF08955 BofC C-terminal domain D9C11_03255 PF08977 Bypass of Forespore C, N terminal D9C11_03260 PF07690 Major Facilitator Superfamily D9C11_03265 PF02894 Oxidoreductase family, C-terminal alpha/beta domain D9C11_03265 PF01408 Oxidoreductase family, NAD-binding Rossmann fold D9C11_03290 PF01235 Sodium:alanine symporter family D9C11_03295 PF01709 Transcriptional regulator D9C11_03300 PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) D9C11_03305 PF01476 LysM domain D9C11_03310 PF02445 Quinolinate synthetase A protein D9C11_03315 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain D9C11_03315 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain D9C11_03320 PF00890 FAD binding domain D9C11_03320 PF02910 Fumarate reductase flavoprotein C-term D9C11_03325 PF00266 Aminotransferase class-V D9C11_03330 PF08279 HTH domain D9C11_03330 PF02829 3H domain D9C11_03335 PF01842 ACT domain D9C11_03335 PF00800 Prephenate dehydratase D9C11_03340 PF01842 ACT domain D9C11_03345 PF01926 50S ribosome-binding GTPase D9C11_03345 PF01018 GTP1/OBG D9C11_03345 PF09269 Domain of unknown function (DUF1967) D9C11_03350 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain D9C11_03350 PF14682 Sporulation initiation phospho-transferase B, C-terminal D9C11_03360 PF01016 Ribosomal L27 protein D9C11_03365 PF04327 Cysteine protease Prp D9C11_03370 PF00829 Ribosomal prokaryotic L21 protein D9C11_03375 PF02163 Peptidase family M50 D9C11_03380 PF01551 Peptidase family M23 D9C11_03385 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain D9C11_03390 PF03775 Septum formation inhibitor MinC, C-terminal domain D9C11_03395 PF04093 rod shape-determining protein MreD D9C11_03400 PF04085 rod shape-determining protein MreC D9C11_03435 PF14449 Pre-toxin TG D9C11_03435 PF14410 HNH/ENDO VII superfamily nuclease with conserved GHE residues D9C11_03435 PF04740 LXG domain of WXG superfamily D9C11_03445 PF01510 N-acetylmuramoyl-L-alanine amidase D9C11_03445 PF01471 Putative peptidoglycan binding domain D9C11_03450 PF05105 Bacteriophage holin family D9C11_03480 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase D9C11_03480 PF13457 GW (Gly-Tryp) dipeptide domain D9C11_03490 PF01464 Transglycosylase SLT domain D9C11_03535 PF00574 Clp protease D9C11_03580 PF17854 FtsK alpha domain D9C11_03580 PF01580 FtsK/SpoIIIE family D9C11_03580 PF09397 Ftsk gamma domain D9C11_03620 PF01612 3'-5' exonuclease D9C11_03620 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain D9C11_03620 PF00476 DNA polymerase family A D9C11_03620 PF01367 5'-3' exonuclease, C-terminal SAM fold D9C11_03660 PF01381 Helix-turn-helix D9C11_03670 PF02796 Helix-turn-helix domain of resolvase D9C11_03670 PF00239 Resolvase, N terminal domain D9C11_03675 PF00633 Helix-hairpin-helix motif D9C11_03675 PF04002 RadC-like JAB domain D9C11_03680 PF02545 Maf-like protein D9C11_03685 PF05036 Sporulation related domain D9C11_03690 PF06750 Bacterial Peptidase A24 N-terminal domain D9C11_03690 PF01478 Type IV leader peptidase family D9C11_03695 PF02875 Mur ligase family, glutamate ligase domain D9C11_03695 PF08245 Mur ligase middle domain D9C11_03700 PF08264 Anticodon-binding domain of tRNA D9C11_03700 PF10458 Valyl tRNA synthetase tRNA binding arm D9C11_03700 PF00133 tRNA synthetases class I (I, L, M and V) D9C11_03715 PF01476 LysM domain D9C11_03720 PF00202 Aminotransferase class-III D9C11_03725 PF00490 Delta-aminolevulinic acid dehydratase D9C11_03730 PF02602 Uroporphyrinogen-III synthase HemD D9C11_03735 PF03900 Porphobilinogen deaminase, C-terminal domain D9C11_03735 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain D9C11_03740 PF01578 Cytochrome C assembly protein D9C11_03745 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain D9C11_03745 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain D9C11_03745 PF01488 Shikimate / quinate 5-dehydrogenase D9C11_03755 PF01926 50S ribosome-binding GTPase D9C11_03760 PF00004 ATPase family associated with various cellular activities (AAA) D9C11_03760 PF05362 Lon protease (S16) C-terminal proteolytic domain D9C11_03760 PF02190 ATP-dependent protease La (LON) substrate-binding domain D9C11_03765 PF00004 ATPase family associated with various cellular activities (AAA) D9C11_03765 PF05362 Lon protease (S16) C-terminal proteolytic domain D9C11_03770 PF07724 AAA domain (Cdc48 subfamily) D9C11_03770 PF10431 C-terminal, D2-small domain, of ClpB protein D9C11_03770 PF06689 ClpX C4-type zinc finger D9C11_03775 PF05697 Bacterial trigger factor protein (TF) D9C11_03775 PF05698 Bacterial trigger factor protein (TF) C-terminus D9C11_03775 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase D9C11_03785 PF00694 Aconitase C-terminal domain D9C11_03790 PF00330 Aconitase family (aconitate hydratase) D9C11_03795 PF00180 Isocitrate/isopropylmalate dehydrogenase D9C11_03800 PF00682 HMGL-like D9C11_03800 PF08502 LeuA allosteric (dimerisation) domain D9C11_03805 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain D9C11_03805 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain D9C11_03810 PF10369 Small subunit of acetolactate synthase D9C11_03810 PF01842 ACT domain D9C11_03815 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain D9C11_03815 PF00205 Thiamine pyrophosphate enzyme, central domain D9C11_03815 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain D9C11_03825 PF00583 Acetyltransferase (GNAT) family D9C11_03840 PF12850 Calcineurin-like phosphoesterase superfamily domain D9C11_03845 PF01725 Ham1 family D9C11_03850 PF03725 3' exoribonuclease family, domain 2 D9C11_03850 PF01138 3' exoribonuclease family, domain 1 D9C11_03855 PF10646 Sporulation and spore germination D9C11_03860 PF01177 Asp/Glu/Hydantoin racemase D9C11_03870 PF00196 Bacterial regulatory proteins, luxR family D9C11_03875 PF03061 Thioesterase superfamily D9C11_03880 PF13085 2Fe-2S iron-sulfur cluster binding domain D9C11_03880 PF13183 4Fe-4S dicluster domain D9C11_03885 PF00890 FAD binding domain D9C11_03885 PF02910 Fumarate reductase flavoprotein C-term D9C11_03890 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit D9C11_03895 PF10702 Protein of unknown function (DUF2507) D9C11_03900 PF00696 Amino acid kinase family D9C11_03900 PF13840 ACT domain D9C11_03900 PF01842 ACT domain D9C11_03910 PF02151 UvrB/uvrC motif D9C11_03910 PF08459 UvrC Helix-hairpin-helix N-terminal D9C11_03910 PF01541 GIY-YIG catalytic domain D9C11_03915 PF00085 Thioredoxin D9C11_03920 PF06964 Alpha-L-arabinofuranosidase C-terminal domain D9C11_03925 PF01012 Electron transfer flavoprotein domain D9C11_03925 PF00766 Electron transfer flavoprotein FAD-binding domain D9C11_03930 PF01012 Electron transfer flavoprotein domain D9C11_03935 PF00378 Enoyl-CoA hydratase/isomerase D9C11_03940 PF08359 YsiA-like protein, C-terminal region D9C11_03940 PF00440 Bacterial regulatory proteins, tetR family D9C11_03950 PF03994 Domain of Unknown Function (DUF350) D9C11_03955 PF00488 MutS domain V D9C11_03955 PF01713 Smr domain D9C11_03960 PF14791 DNA polymerase beta thumb D9C11_03960 PF14716 Helix-hairpin-helix domain D9C11_03960 PF02811 PHP domain D9C11_03965 PF02674 Colicin V production protein D9C11_03970 PF05164 Cell division protein ZapA D9C11_03975 PF01351 Ribonuclease HII D9C11_03975 PF11858 Domain of unknown function (DUF3378) D9C11_03980 PF03483 B3/4 domain D9C11_03980 PF03484 tRNA synthetase B5 domain D9C11_03980 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain D9C11_03980 PF03147 Ferredoxin-fold anticodon binding domain D9C11_03980 PF01588 Putative tRNA binding domain D9C11_03985 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain D9C11_03985 PF01409 tRNA synthetases class II core domain (F) D9C11_03995 PF00588 SpoU rRNA Methylase family D9C11_03995 PF08032 RNA 2'-O ribose methyltransferase substrate binding D9C11_04000 PF14098 Small, acid-soluble spore protein I D9C11_04005 PF13556 PucR C-terminal helix-turn-helix domain D9C11_04005 PF17853 GGDEF-like domain D9C11_04005 PF05651 Putative sugar diacid recognition D9C11_04010 PF02913 FAD linked oxidases, C-terminal domain D9C11_04010 PF01565 FAD binding domain D9C11_04015 PF13183 4Fe-4S dicluster domain D9C11_04015 PF02754 Cysteine-rich domain D9C11_04020 PF12681 Glyoxalase-like domain D9C11_04025 PF02554 Carbon starvation protein CstA D9C11_04025 PF13722 5TM C-terminal transporter carbon starvation CstA D9C11_04030 PF06964 Alpha-L-arabinofuranosidase C-terminal domain D9C11_04035 PF00528 Binding-protein-dependent transport system inner membrane component D9C11_04040 PF00528 Binding-protein-dependent transport system inner membrane component D9C11_04045 PF01547 Bacterial extracellular solute-binding protein D9C11_04050 PF13685 Iron-containing alcohol dehydrogenase D9C11_04055 PF13344 Haloacid dehalogenase-like hydrolase D9C11_04060 PF00596 Class II Aldolase and Adducin N-terminal domain D9C11_04065 PF02782 FGGY family of carbohydrate kinases, C-terminal domain D9C11_04065 PF00370 FGGY family of carbohydrate kinases, N-terminal domain D9C11_04070 PF11762 L-arabinose isomerase C-terminal domain D9C11_04070 PF02610 L-arabinose isomerase D9C11_04075 PF04616 Glycosyl hydrolases family 43 D9C11_04080 PF05343 M42 glutamyl aminopeptidase D9C11_04090 PF06961 Protein of unknown function (DUF1294) D9C11_04095 PF00453 Ribosomal protein L20 D9C11_04100 PF01632 Ribosomal protein L35 D9C11_04105 PF00707 Translation initiation factor IF-3, C-terminal domain D9C11_04105 PF05198 Translation initiation factor IF-3, N-terminal domain D9C11_04115 PF04172 LrgB-like family D9C11_04120 PF03788 LrgA family D9C11_04125 PF04397 LytTr DNA-binding domain D9C11_04125 PF00072 Response regulator receiver domain D9C11_04130 PF06580 Histidine kinase D9C11_04130 PF07694 5TMR of 5TMR-LYT D9C11_04130 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D9C11_04140 PF02824 TGS domain D9C11_04140 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) D9C11_04140 PF03129 Anticodon binding domain D9C11_04140 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain D9C11_04145 PF08812 YtxC-like family D9C11_04150 PF09335 SNARE associated Golgi protein D9C11_04155 PF07319 Primosomal protein DnaI N-terminus D9C11_04155 PF01695 IstB-like ATP binding protein D9C11_04160 PF07261 Replication initiation and membrane attachment D9C11_04165 PF03477 ATP cone domain D9C11_04170 PF02675 S-adenosylmethionine decarboxylase D9C11_04175 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain D9C11_04175 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain D9C11_04200 PF01121 Dephospho-CoA kinase D9C11_04205 PF02659 Putative manganese efflux pump D9C11_04210 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain D9C11_04210 PF06827 Zinc finger found in FPG and IleRS D9C11_04210 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain D9C11_04215 PF01367 5'-3' exonuclease, C-terminal SAM fold D9C11_04215 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain D9C11_04215 PF00476 DNA polymerase family A D9C11_04220 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D9C11_04220 PF00512 His Kinase A (phospho-acceptor) domain D9C11_04220 PF00989 PAS fold D9C11_04220 PF16736 Single Cache-like D9C11_04225 PF00072 Response regulator receiver domain D9C11_04225 PF00486 Transcriptional regulatory protein, C terminal D9C11_04230 PF00056 lactate/malate dehydrogenase, NAD binding domain D9C11_04230 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain D9C11_04235 PF00180 Isocitrate/isopropylmalate dehydrogenase D9C11_04240 PF00285 Citrate synthase, C-terminal domain D9C11_04245 PF04284 Protein of unknown function (DUF441) D9C11_04250 PF01594 AI-2E family transporter D9C11_04255 PF04186 FxsA cytoplasmic membrane protein D9C11_04260 PF00391 PEP-utilising enzyme, mobile domain D9C11_04260 PF00224 Pyruvate kinase, barrel domain D9C11_04260 PF02887 Pyruvate kinase, alpha/beta domain D9C11_04265 PF00365 Phosphofructokinase D9C11_04270 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit D9C11_04275 PF17848 Acetyl-coA carboxylase zinc finger domain D9C11_04275 PF01039 Carboxyl transferase domain D9C11_04280 PF00390 Malic enzyme, N-terminal domain D9C11_04280 PF03949 Malic enzyme, NAD binding domain D9C11_04285 PF07733 Bacterial DNA polymerase III alpha NTPase domain D9C11_04285 PF14579 Helix-hairpin-helix motif D9C11_04285 PF17657 Bacterial DNA polymerase III alpha subunit finger domain D9C11_04285 PF01336 OB-fold nucleic acid binding domain D9C11_04285 PF02811 PHP domain D9C11_04290 PF14034 Sporulation protein YtrH D9C11_04305 PF02272 DHHA1 domain D9C11_04305 PF01368 DHH family D9C11_04310 PF14007 YtpI-like protein D9C11_04315 PF03061 Thioesterase superfamily D9C11_04315 PF00571 CBS domain D9C11_04315 PF07085 DRTGG domain D9C11_04315 PF00392 Bacterial regulatory proteins, gntR family D9C11_04320 PF01925 Sulfite exporter TauE/SafE D9C11_04325 PF07687 Peptidase dimerisation domain D9C11_04325 PF01546 Peptidase family M20/M25/M40 D9C11_04330 PF01687 Riboflavin kinase D9C11_04340 PF00462 Glutaredoxin D9C11_04345 PF00296 Luciferase-like monooxygenase D9C11_04350 PF00005 ABC transporter D9C11_04355 PF00528 Binding-protein-dependent transport system inner membrane component D9C11_04360 PF00528 Binding-protein-dependent transport system inner membrane component D9C11_04365 PF00497 Bacterial extracellular solute-binding proteins, family 3 D9C11_04370 PF00497 Bacterial extracellular solute-binding proteins, family 3 D9C11_04375 PF00583 Acetyltransferase (GNAT) family D9C11_04380 PF03466 LysR substrate binding domain D9C11_04380 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D9C11_04400 PF00206 Lyase D9C11_04400 PF14698 Argininosuccinate lyase C-terminal D9C11_04405 PF00764 Arginosuccinate synthase D9C11_04410 PF00994 Probable molybdopterin binding domain D9C11_04415 PF00871 Acetokinase family D9C11_04425 PF02384 N-6 DNA Methylase D9C11_04430 PF08534 Redoxin D9C11_04435 PF09579 Sporulation protein YtfJ (Spore_YtfJ) D9C11_04440 PF11167 Protein of unknown function (DUF2953) D9C11_04445 PF06271 RDD family D9C11_04450 PF01343 Peptidase family S49 D9C11_04455 PF01513 ATP-NAD kinase D9C11_04460 PF07969 Amidohydrolase family D9C11_04465 PF13193 AMP-binding enzyme C-terminal domain D9C11_04465 PF00501 AMP-binding enzyme D9C11_04470 PF00269 Small, acid-soluble spore proteins, alpha/beta type D9C11_04475 PF02926 THUMP domain D9C11_04475 PF02568 Thiamine biosynthesis protein (ThiI) D9C11_04480 PF00266 Aminotransferase class-V D9C11_04485 PF05525 Branched-chain amino acid transport protein D9C11_04490 PF06160 Septation ring formation regulator, EzrA D9C11_04495 PF02811 PHP domain D9C11_04500 PF00440 Bacterial regulatory proteins, tetR family D9C11_04505 PF13185 GAF domain D9C11_04515 PF00990 Diguanylate cyclase, GGDEF domain D9C11_04525 PF01479 S4 domain D9C11_04525 PF00163 Ribosomal protein S4/S9 N-terminal domain D9C11_04530 PF01479 S4 domain D9C11_04530 PF00579 tRNA synthetases class I (W and Y) D9C11_04535 PF13193 AMP-binding enzyme C-terminal domain D9C11_04535 PF00501 AMP-binding enzyme D9C11_04540 PF00583 Acetyltransferase (GNAT) family D9C11_04545 PF00571 CBS domain D9C11_04550 PF00850 Histone deacetylase domain D9C11_04555 PF00691 OmpA family D9C11_04555 PF13677 Membrane MotB of proton-channel complex MotA/MotB D9C11_04560 PF01618 MotA/TolQ/ExbB proton channel family D9C11_04565 PF00356 Bacterial regulatory proteins, lacI family D9C11_04570 PF01817 Chorismate mutase type II D9C11_04570 PF00793 DAHP synthetase I family D9C11_04575 PF11009 Protein of unknown function (DUF2847) D9C11_04580 PF12732 YtxH-like protein D9C11_04585 PF06103 Bacterial protein of unknown function (DUF948) D9C11_04590 PF08245 Mur ligase middle domain D9C11_04590 PF02875 Mur ligase family, glutamate ligase domain D9C11_04590 PF01225 Mur ligase family, catalytic domain D9C11_04595 PF17854 FtsK alpha domain D9C11_04595 PF09397 Ftsk gamma domain D9C11_04595 PF01580 FtsK/SpoIIIE family D9C11_04600 PF01588 Putative tRNA binding domain D9C11_04600 PF14794 Domain of unknown function (DUF4479) D9C11_04605 PF07285 Protein of unknown function (DUF1444) D9C11_04610 PF00085 Thioredoxin D9C11_04625 PF05343 M42 glutamyl aminopeptidase D9C11_04630 PF03413 Peptidase propeptide and YPEB domain D9C11_04635 PF00390 Malic enzyme, N-terminal domain D9C11_04635 PF03949 Malic enzyme, NAD binding domain D9C11_04640 PF00753 Metallo-beta-lactamase superfamily D9C11_04645 PF02390 Putative methyltransferase D9C11_04650 PF14165 YtzH-like protein D9C11_04655 PF01636 Phosphotransferase enzyme family D9C11_04660 PF00128 Alpha amylase, catalytic domain D9C11_04660 PF17999 Pullulanase N1-terminal domain D9C11_04660 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) D9C11_04665 PF00781 Diacylglycerol kinase catalytic domain D9C11_04680 PF00291 Pyridoxal-phosphate dependent enzyme D9C11_04685 PF01546 Peptidase family M20/M25/M40 D9C11_04690 PF00860 Permease family D9C11_04700 PF00005 ABC transporter D9C11_04705 PF08220 DeoR-like helix-turn-helix domain D9C11_04710 PF00849 RNA pseudouridylate synthase D9C11_04710 PF01479 S4 domain D9C11_04715 PF14667 Polysaccharide biosynthesis C-terminal domain D9C11_04715 PF01943 Polysaccharide biosynthesis protein D9C11_04725 PF02028 BCCT, betaine/carnitine/choline family transporter D9C11_04730 PF10957 Sporulation protein Cse60 D9C11_04750 PF07470 Glycosyl Hydrolase Family 88 D9C11_04755 PF00528 Binding-protein-dependent transport system inner membrane component D9C11_04765 PF13416 Bacterial extracellular solute-binding protein D9C11_04770 PF00528 Binding-protein-dependent transport system inner membrane component D9C11_04775 PF01370 NAD dependent epimerase/dehydratase family D9C11_04780 PF00067 Cytochrome P450 D9C11_04785 PF04055 Radical SAM superfamily D9C11_04785 PF06968 Biotin and Thiamin Synthesis associated domain D9C11_04795 PF00155 Aminotransferase class I and II D9C11_04800 PF00202 Aminotransferase class-III D9C11_04810 PF01738 Dienelactone hydrolase family D9C11_04835 PF02056 Family 4 glycosyl hydrolase D9C11_04835 PF11975 Family 4 glycosyl hydrolase C-terminal domain D9C11_04840 PF00581 Rhodanese-like domain D9C11_04845 PF00133 tRNA synthetases class I (I, L, M and V) D9C11_04845 PF09334 tRNA synthetases class I (M) D9C11_04845 PF13603 Leucyl-tRNA synthetase, Domain 2 D9C11_04845 PF08264 Anticodon-binding domain of tRNA D9C11_04850 PF14074 Protein of unknown function (DUF4257) D9C11_04860 PF07690 Major Facilitator Superfamily D9C11_04875 PF00872 Transposase, Mutator family D9C11_04890 PF00005 ABC transporter D9C11_04895 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D9C11_04900 PF00486 Transcriptional regulatory protein, C terminal D9C11_04900 PF00072 Response regulator receiver domain D9C11_04905 PF12704 MacB-like periplasmic core domain D9C11_04905 PF02687 FtsX-like permease family D9C11_04910 PF00005 ABC transporter D9C11_04925 PF00005 ABC transporter D9C11_04930 PF00392 Bacterial regulatory proteins, gntR family D9C11_04945 PF10732 Protein of unknown function (DUF2524) D9C11_04950 PF16199 Radical_SAM C-terminal domain D9C11_04950 PF04055 Radical SAM superfamily D9C11_04955 PF06962 Putative rRNA methylase D9C11_04960 PF10776 Protein of unknown function (DUF2600) D9C11_04965 PF12146 Serine aminopeptidase, S33 D9C11_04970 PF00132 Bacterial transferase hexapeptide (six repeats) D9C11_04975 PF00324 Amino acid permease D9C11_04980 PF00733 Asparagine synthase D9C11_04980 PF13537 Glutamine amidotransferase domain D9C11_04985 PF02772 S-adenosylmethionine synthetase, central domain D9C11_04985 PF02773 S-adenosylmethionine synthetase, C-terminal domain D9C11_04985 PF00438 S-adenosylmethionine synthetase, N-terminal domain D9C11_04990 PF01293 Phosphoenolpyruvate carboxykinase D9C11_04995 PF10763 Protein of unknown function (DUF2584) D9C11_05000 PF00326 Prolyl oligopeptidase family D9C11_05010 PF00005 ABC transporter D9C11_05015 PF00528 Binding-protein-dependent transport system inner membrane component D9C11_05020 PF00293 NUDIX domain D9C11_05025 PF05105 Bacteriophage holin family D9C11_05030 PF00210 Ferritin-like domain D9C11_05040 PF13115 YtkA-like D9C11_05045 PF02664 S-Ribosylhomocysteinase (LuxS) D9C11_05050 PF01809 Putative membrane protein insertion efficiency factor D9C11_05055 PF00484 Carbonic anhydrase D9C11_05060 PF01197 Ribosomal protein L31 D9C11_05065 PF01654 Cytochrome bd terminal oxidase subunit I D9C11_05070 PF02322 Cytochrome bd terminal oxidase subunit II D9C11_05075 PF07561 Domain of Unknown Function (DUF1540) D9C11_05080 PF00950 ABC 3 transport family D9C11_05085 PF00950 ABC 3 transport family D9C11_05090 PF00005 ABC transporter D9C11_05095 PF01297 Zinc-uptake complex component A periplasmic D9C11_05100 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain D9C11_05100 PF13378 Enolase C-terminal domain-like D9C11_05105 PF13193 AMP-binding enzyme C-terminal domain D9C11_05105 PF00501 AMP-binding enzyme D9C11_05110 PF00378 Enoyl-CoA hydratase/isomerase D9C11_05115 PF00561 alpha/beta hydrolase fold D9C11_05120 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain D9C11_05120 PF16582 Middle domain of thiamine pyrophosphate D9C11_05120 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain D9C11_05125 PF00425 chorismate binding enzyme D9C11_05135 PF01258 Prokaryotic dksA/traR C4-type zinc finger D9C11_05140 PF00483 Nucleotidyl transferase D9C11_05145 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain D9C11_05145 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain D9C11_05145 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain D9C11_05150 PF01370 NAD dependent epimerase/dehydratase family D9C11_05155 PF00534 Glycosyl transferases group 1 D9C11_05155 PF13439 Glycosyltransferase Family 4 D9C11_05170 PF13439 Glycosyltransferase Family 4 D9C11_05170 PF00534 Glycosyl transferases group 1 D9C11_05175 PF01636 Phosphotransferase enzyme family D9C11_05180 PF03073 TspO/MBR family D9C11_05195 PF00343 Carbohydrate phosphorylase D9C11_05200 PF00534 Glycosyl transferases group 1 D9C11_05200 PF08323 Starch synthase catalytic domain D9C11_05205 PF00483 Nucleotidyl transferase D9C11_05210 PF00483 Nucleotidyl transferase D9C11_05215 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) D9C11_05215 PF00128 Alpha amylase, catalytic domain D9C11_05215 PF02806 Alpha amylase, C-terminal all-beta domain D9C11_05340 PF09515 Thiamine transporter protein (Thia_YuaJ) D9C11_05345 PF00583 Acetyltransferase (GNAT) family D9C11_05350 PF15975 Flotillin D9C11_05350 PF01145 SPFH domain / Band 7 family D9C11_05360 PF12867 DinB superfamily D9C11_05370 PF00465 Iron-containing alcohol dehydrogenase D9C11_05385 PF17735 Biofilm surface layer A D9C11_05395 PF02080 TrkA-C domain D9C11_05395 PF02254 TrkA-N domain D9C11_05400 PF02386 Cation transport protein D9C11_05405 PF05360 yiaA/B two helix domain D9C11_05410 PF13457 GW (Gly-Tryp) dipeptide domain D9C11_05410 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase D9C11_05415 PF07690 Major Facilitator Superfamily D9C11_05420 PF05995 Cysteine dioxygenase type I D9C11_05465 PF14411 A nuclease of the HNH/ENDO VII superfamily with conserved LHH D9C11_05465 PF04740 LXG domain of WXG superfamily D9C11_05470 PF18801 response regulator aspartate phosphatase H, N terminal D9C11_05495 PF02673 Bacitracin resistance protein BacA D9C11_05500 PF01594 AI-2E family transporter D9C11_05505 PF01408 Oxidoreductase family, NAD-binding Rossmann fold D9C11_05505 PF02894 Oxidoreductase family, C-terminal alpha/beta domain D9C11_05510 PF06134 L-rhamnose isomerase (RhaA) D9C11_05520 PF02782 FGGY family of carbohydrate kinases, C-terminal domain D9C11_05520 PF00370 FGGY family of carbohydrate kinases, N-terminal domain D9C11_05525 PF08220 DeoR-like helix-turn-helix domain D9C11_05525 PF00455 DeoR C terminal sensor domain D9C11_05530 PF00596 Class II Aldolase and Adducin N-terminal domain D9C11_05535 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain D9C11_05535 PF02743 Cache domain D9C11_05535 PF00672 HAMP domain D9C11_05540 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain D9C11_05540 PF00672 HAMP domain D9C11_05540 PF02743 Cache domain D9C11_05545 PF00672 HAMP domain D9C11_05545 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain D9C11_05545 PF02743 Cache domain D9C11_05550 PF02743 Cache domain D9C11_05550 PF00672 HAMP domain D9C11_05550 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain D9C11_05565 PF01894 Uncharacterised protein family UPF0047 D9C11_05575 PF00128 Alpha amylase, catalytic domain D9C11_05575 PF16657 Maltogenic Amylase, C-terminal domain D9C11_05580 PF01595 Cyclin M transmembrane N-terminal domain D9C11_05580 PF00571 CBS domain D9C11_05580 PF03471 Transporter associated domain D9C11_05585 PF04298 Putative neutral zinc metallopeptidase D9C11_05595 PF11458 Membrane-integrating protein Mistic D9C11_05600 PF07885 Ion channel D9C11_05600 PF02254 TrkA-N domain D9C11_05605 PF08868 YugN-like family D9C11_05615 PF00342 Phosphoglucose isomerase D9C11_05620 PF00465 Iron-containing alcohol dehydrogenase D9C11_05625 PF00465 Iron-containing alcohol dehydrogenase D9C11_05630 PF04070 Domain of unknown function (DUF378) D9C11_05635 PF00575 S1 RNA binding domain D9C11_05640 PF00155 Aminotransferase class I and II D9C11_05645 PF01037 Lrp/AsnC ligand binding domain D9C11_05650 PF08386 TAP-like protein D9C11_05650 PF00561 alpha/beta hydrolase fold D9C11_05655 PF08958 Domain of unknown function (DUF1871) D9C11_05660 PF00155 Aminotransferase class I and II D9C11_05665 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D9C11_05665 PF00512 His Kinase A (phospho-acceptor) domain D9C11_05670 PF08810 Kinase associated protein B D9C11_05675 PF00929 Exonuclease D9C11_05685 PF07690 Major Facilitator Superfamily D9C11_05690 PF00905 Penicillin binding protein transpeptidase domain D9C11_05690 PF00912 Transglycosylase D9C11_05695 PF04134 Protein of unknown function, DUF393 D9C11_05700 PF17328 Family of unknown function (DUF5366) D9C11_05705 PF17203 Single cache domain 3 D9C11_05705 PF00989 PAS fold D9C11_05705 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain D9C11_05705 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D9C11_05710 PF00072 Response regulator receiver domain D9C11_05735 PF03390 2-hydroxycarboxylate transporter family D9C11_05745 PF00361 Proton-conducting membrane transporter D9C11_05745 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus D9C11_05745 PF13244 Domain of unknown function (DUF4040) D9C11_05750 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter D9C11_05755 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L D9C11_05760 PF00361 Proton-conducting membrane transporter D9C11_05765 PF01899 Na+/H+ ion antiporter subunit D9C11_05770 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) D9C11_05775 PF03334 Na+/H+ antiporter subunit D9C11_05780 PF03061 Thioesterase superfamily D9C11_05785 PF00072 Response regulator receiver domain D9C11_05785 PF00196 Bacterial regulatory proteins, luxR family D9C11_05790 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D9C11_05790 PF07730 Histidine kinase D9C11_05800 PF00348 Polyprenyl synthetase D9C11_05805 PF08181 DegQ (SacQ) family D9C11_05820 PF00563 EAL domain D9C11_05820 PF08668 HDOD domain D9C11_05825 PF17956 Nicotinate phosphoribosyltransferase C-terminal domain D9C11_05825 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain D9C11_05825 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family D9C11_05830 PF00857 Isochorismatase family D9C11_05835 PF07997 Protein of unknown function (DUF1694) D9C11_05840 PF14166 YueH-like protein D9C11_05845 PF10676 Spore germination protein gerPA/gerPF D9C11_05850 PF01594 AI-2E family transporter D9C11_05860 PF10842 Protein of unknown function (DUF2642) D9C11_05865 PF01966 HD domain D9C11_05870 PF00106 short chain dehydrogenase D9C11_05875 PF17355 Family of unknown function (DUF5383) D9C11_05885 PF01580 FtsK/SpoIIIE family D9C11_05885 PF12538 DNA transporter D9C11_05890 PF10140 WXG100 protein secretion system (Wss), protein YukC D9C11_05895 PF08817 WXG100 protein secretion system (Wss), protein YukD D9C11_05900 PF06013 Proteins of 100 residues with WXG D9C11_05915 PF01262 Alanine dehydrogenase/PNT, C-terminal domain D9C11_05915 PF05222 Alanine dehydrogenase/PNT, N-terminal domain D9C11_05920 PF10042 Uncharacterized conserved protein (DUF2278) D9C11_05925 PF03621 MbtH-like protein D9C11_05930 PF00668 Condensation domain D9C11_05930 PF00501 AMP-binding enzyme D9C11_05930 PF13193 AMP-binding enzyme C-terminal domain D9C11_05930 PF00975 Thioesterase domain D9C11_05930 PF00550 Phosphopantetheine attachment site D9C11_05935 PF00550 Phosphopantetheine attachment site D9C11_05935 PF00857 Isochorismatase family D9C11_05940 PF13193 AMP-binding enzyme C-terminal domain D9C11_05940 PF00501 AMP-binding enzyme D9C11_05945 PF00425 chorismate binding enzyme D9C11_05950 PF00106 short chain dehydrogenase D9C11_05955 PF00756 Putative esterase D9C11_05965 PF02632 BioY family D9C11_05970 PF03553 Na+/H+ antiporter family D9C11_05970 PF13726 Na+-H+ antiporter family D9C11_05975 PF00883 Cytosol aminopeptidase family, catalytic domain D9C11_05975 PF02789 Cytosol aminopeptidase family, N-terminal domain D9C11_05980 PF02681 Divergent PAP2 family D9C11_05985 PF06725 3D domain D9C11_05990 PF14068 Putative membrane protein D9C11_05995 PF17302 Family of unknown function (DUF5351) D9C11_06005 PF07992 Pyridine nucleotide-disulphide oxidoreductase D9C11_06010 PF07992 Pyridine nucleotide-disulphide oxidoreductase D9C11_06020 PF00478 IMP dehydrogenase / GMP reductase domain D9C11_06035 PF01521 Iron-sulphur cluster biosynthesis D9C11_06040 PF01678 Diaminopimelate epimerase D9C11_06045 PF07662 Na+ dependent nucleoside transporter C-terminus D9C11_06045 PF01773 Na+ dependent nucleoside transporter N-terminus D9C11_06050 PF07293 Protein of unknown function (DUF1450) D9C11_06055 PF07992 Pyridine nucleotide-disulphide oxidoreductase D9C11_06060 PF07315 Protein of unknown function (DUF1462) D9C11_06065 PF01106 NifU-like domain D9C11_06070 PF07676 WD40-like Beta Propeller Repeat D9C11_06070 PF00326 Prolyl oligopeptidase family D9C11_06075 PF00288 GHMP kinases N terminal domain D9C11_06075 PF08544 GHMP kinases C terminal D9C11_06080 PF00291 Pyridoxal-phosphate dependent enzyme D9C11_06085 PF01842 ACT domain D9C11_06085 PF00742 Homoserine dehydrogenase D9C11_06085 PF03447 Homoserine dehydrogenase, NAD binding domain D9C11_06095 PF04608 Phosphatidylglycerophosphatase A D9C11_06100 PF13344 Haloacid dehalogenase-like hydrolase D9C11_06105 PF01934 Protein of unknown function DUF86 D9C11_06110 PF06265 Protein of unknown function (DUF1027) D9C11_06115 PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) D9C11_06120 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family D9C11_06120 PF04055 Radical SAM superfamily D9C11_06125 PF01551 Peptidase family M23 D9C11_06130 PF09560 Sporulation protein YunB (Spo_YunB) D9C11_06135 PF08827 Domain of unknown function (DUF1805) D9C11_06140 PF02872 5'-nucleotidase, C-terminal domain D9C11_06145 PF01925 Sulfite exporter TauE/SafE D9C11_06150 PF01904 Protein of unknown function DUF72 D9C11_06160 PF01979 Amidohydrolase family D9C11_06165 PF07905 Purine catabolism regulatory protein-like family D9C11_06165 PF13556 PucR C-terminal helix-turn-helix domain D9C11_06165 PF17853 GGDEF-like domain D9C11_06170 PF00860 Permease family D9C11_06175 PF00860 Permease family D9C11_06180 PF01014 Uricase D9C11_06180 PF09349 OHCU decarboxylase D9C11_06185 PF00576 HIUase/Transthyretin family D9C11_06190 PF09680 Family of unknown function D9C11_06195 PF01799 [2Fe-2S] binding domain D9C11_06195 PF00111 2Fe-2S iron-sulfur cluster binding domain D9C11_06200 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase D9C11_06200 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain D9C11_06205 PF00941 FAD binding domain in molybdopterin dehydrogenase D9C11_06210 PF12804 MobA-like NTP transferase domain D9C11_06215 PF13478 XdhC Rossmann domain D9C11_06215 PF02625 XdhC and CoxI family D9C11_06220 PF00266 Aminotransferase class-V D9C11_06225 PF01546 Peptidase family M20/M25/M40 D9C11_06235 PF04231 Endonuclease I D9C11_06265 PF00155 Aminotransferase class I and II D9C11_06265 PF00392 Bacterial regulatory proteins, gntR family D9C11_06285 PF03459 TOBE domain D9C11_06285 PF17912 MalK OB fold domain D9C11_06285 PF00005 ABC transporter D9C11_06290 PF00392 Bacterial regulatory proteins, gntR family D9C11_06290 PF07702 UTRA domain D9C11_06295 PF00294 pfkB family carbohydrate kinase D9C11_06305 PF00528 Binding-protein-dependent transport system inner membrane component D9C11_06315 PF01380 SIS domain D9C11_06320 PF01541 GIY-YIG catalytic domain D9C11_06325 PF01266 FAD dependent oxidoreductase D9C11_06345 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily D9C11_06380 PF04740 LXG domain of WXG superfamily D9C11_06380 PF14411 A nuclease of the HNH/ENDO VII superfamily with conserved LHH D9C11_06390 PF01471 Putative peptidoglycan binding domain D9C11_06390 PF01476 LysM domain D9C11_06390 PF01510 N-acetylmuramoyl-L-alanine amidase D9C11_06395 PF05105 Bacteriophage holin family D9C11_06430 PF01464 Transglycosylase SLT domain D9C11_06525 PF00589 Phage integrase family D9C11_06535 PF09643 YopX protein D9C11_06565 PF17356 Phage-like element PBSX protein XtrA D9C11_06600 PF01381 Helix-turn-helix D9C11_06605 PF01381 Helix-turn-helix D9C11_06605 PF09856 Predicted transcriptional regulator (DUF2083) D9C11_06605 PF06114 IrrE N-terminal-like domain D9C11_06625 PF01458 Uncharacterized protein family (UPF0051) D9C11_06630 PF01592 NifU-like N terminal domain D9C11_06635 PF00266 Aminotransferase class-V D9C11_06640 PF01458 Uncharacterized protein family (UPF0051) D9C11_06645 PF00005 ABC transporter D9C11_06665 PF03180 NLPA lipoprotein D9C11_06670 PF00528 Binding-protein-dependent transport system inner membrane component D9C11_06675 PF00005 ABC transporter D9C11_06675 PF09383 NIL domain D9C11_06680 PF02036 SCP-2 sterol transfer family D9C11_06685 PF00085 Thioredoxin D9C11_06690 PF01751 Toprim domain D9C11_06695 PF10830 Protein of unknown function (DUF2553) D9C11_06700 PF01597 Glycine cleavage H-protein D9C11_06705 PF03960 ArsC family D9C11_06710 PF00441 Acyl-CoA dehydrogenase, C-terminal domain D9C11_06710 PF02770 Acyl-CoA dehydrogenase, middle domain D9C11_06710 PF02771 Acyl-CoA dehydrogenase, N-terminal domain D9C11_06715 PF02803 Thiolase, C-terminal domain D9C11_06715 PF00108 Thiolase, N-terminal domain D9C11_06720 PF00378 Enoyl-CoA hydratase/isomerase D9C11_06720 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain D9C11_06720 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain D9C11_06725 PF14115 YuzL-like protein D9C11_06730 PF01619 Proline dehydrogenase D9C11_06740 PF07875 Coat F domain D9C11_06745 PF01047 MarR family D9C11_06750 PF07690 Major Facilitator Superfamily D9C11_06755 PF14552 Tautomerase enzyme D9C11_06765 PF03466 LysR substrate binding domain D9C11_06765 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D9C11_06770 PF10835 Protein of unknown function (DUF2573) D9C11_06775 PF00005 ABC transporter D9C11_06780 PF14039 YusW-like protein D9C11_06790 PF00872 Transposase, Mutator family D9C11_06805 PF00005 ABC transporter D9C11_06840 PF00155 Aminotransferase class I and II D9C11_06855 PF00210 Ferritin-like domain D9C11_06860 PF13180 PDZ domain D9C11_06865 PF00486 Transcriptional regulatory protein, C terminal D9C11_06865 PF00072 Response regulator receiver domain D9C11_06870 PF00512 His Kinase A (phospho-acceptor) domain D9C11_06870 PF00672 HAMP domain D9C11_06870 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D9C11_06880 PF00440 Bacterial regulatory proteins, tetR family D9C11_06885 PF10415 Fumarase C C-terminus D9C11_06885 PF00206 Lyase D9C11_06890 PF13113 Protein of unknown function (DUF3970) D9C11_06895 PF03323 Bacillus/Clostridium GerA spore germination protein D9C11_06900 PF03845 Spore germination protein D9C11_06905 PF05504 Spore germination B3/ GerAC like, C-terminal D9C11_06910 PF00196 Bacterial regulatory proteins, luxR family D9C11_06910 PF00072 Response regulator receiver domain D9C11_06915 PF00672 HAMP domain D9C11_06915 PF07730 Histidine kinase D9C11_06915 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D9C11_06920 PF09922 Cell wall-active antibiotics response 4TMS YvqF D9C11_06925 PF13349 Putative adhesin D9C11_06930 PF04012 PspA/IM30 family D9C11_06940 PF07690 Major Facilitator Superfamily D9C11_06945 PF01923 Cobalamin adenosyltransferase D9C11_06950 PF00005 ABC transporter D9C11_06955 PF01032 FecCD transport family D9C11_06960 PF01497 Periplasmic binding protein D9C11_06965 PF00106 short chain dehydrogenase D9C11_06970 PF08450 SMP-30/Gluconolactonase/LRE-like region D9C11_06975 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D9C11_06975 PF00512 His Kinase A (phospho-acceptor) domain D9C11_06980 PF00486 Transcriptional regulatory protein, C terminal D9C11_06980 PF00072 Response regulator receiver domain D9C11_06990 PF04545 Sigma-70, region 4 D9C11_06995 PF12841 YvrJ protein family D9C11_07000 PF00190 Cupin D9C11_07005 PF14184 Regulatory protein YrvL D9C11_07010 PF02687 FtsX-like permease family D9C11_07010 PF12704 MacB-like periplasmic core domain D9C11_07015 PF00005 ABC transporter D9C11_07020 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion D9C11_07025 PF00005 ABC transporter D9C11_07035 PF01032 FecCD transport family D9C11_07040 PF01497 Periplasmic binding protein D9C11_07050 PF13520 Amino acid permease D9C11_07060 PF09575 Small spore protein J (Spore_SspJ) D9C11_07065 PF04307 LexA-binding, inner membrane-associated putative hydrolase D9C11_07070 PF00884 Sulfatase D9C11_07075 PF12728 Helix-turn-helix domain D9C11_07075 PF12727 PBP superfamily domain D9C11_07085 PF00528 Binding-protein-dependent transport system inner membrane component D9C11_07090 PF00248 Aldo/keto reductase family D9C11_07100 PF00999 Sodium/hydrogen exchanger family D9C11_07105 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain D9C11_07105 PF01077 Nitrite and sulphite reductase 4Fe-4S domain D9C11_07110 PF00667 FAD binding domain D9C11_07110 PF00258 Flavodoxin D9C11_07110 PF00175 Oxidoreductase NAD-binding domain D9C11_07115 PF13538 UvrD-like helicase C-terminal domain D9C11_07120 PF03458 UPF0126 domain D9C11_07130 PF02600 Disulfide bond formation protein DsbB D9C11_07135 PF13462 Thioredoxin D9C11_07140 PF00403 Heavy-metal-associated domain D9C11_07145 PF00403 Heavy-metal-associated domain D9C11_07150 PF00403 Heavy-metal-associated domain D9C11_07155 PF02583 Metal-sensitive transcriptional repressor D9C11_07160 PF01408 Oxidoreductase family, NAD-binding Rossmann fold D9C11_07160 PF02894 Oxidoreductase family, C-terminal alpha/beta domain D9C11_07180 PF00893 Small Multidrug Resistance protein D9C11_07185 PF00440 Bacterial regulatory proteins, tetR family D9C11_07195 PF00106 short chain dehydrogenase D9C11_07205 PF01668 SmpB protein D9C11_07210 PF00773 RNB domain D9C11_07210 PF08206 Ribonuclease B OB domain D9C11_07210 PF17876 Cold shock domain D9C11_07210 PF00575 S1 RNA binding domain D9C11_07215 PF12146 Serine aminopeptidase, S33 D9C11_07220 PF03840 Preprotein translocase SecG subunit D9C11_07225 PF00561 alpha/beta hydrolase fold D9C11_07230 PF01381 Helix-turn-helix D9C11_07245 PF01638 HxlR-like helix-turn-helix D9C11_07255 PF00528 Binding-protein-dependent transport system inner membrane component D9C11_07260 PF04069 Substrate binding domain of ABC-type glycine betaine transport system D9C11_07265 PF00528 Binding-protein-dependent transport system inner membrane component D9C11_07270 PF00571 CBS domain D9C11_07270 PF00005 ABC transporter D9C11_07275 PF12802 MarR family D9C11_07280 PF00528 Binding-protein-dependent transport system inner membrane component D9C11_07285 PF04069 Substrate binding domain of ABC-type glycine betaine transport system D9C11_07290 PF00528 Binding-protein-dependent transport system inner membrane component D9C11_07295 PF00005 ABC transporter D9C11_07295 PF00571 CBS domain D9C11_07300 PF12802 MarR family D9C11_07305 PF01914 MarC family integral membrane protein D9C11_07310 PF11724 YvbH-like oligomerisation region D9C11_07310 PF08000 Bacterial PH domain D9C11_07320 PF13240 zinc-ribbon domain D9C11_07325 PF00583 Acetyltransferase (GNAT) family D9C11_07330 PF03952 Enolase, N-terminal domain D9C11_07330 PF00113 Enolase, C-terminal TIM barrel domain D9C11_07335 PF06415 BPG-independent PGAM N-terminus (iPGM_N) D9C11_07335 PF01676 Metalloenzyme superfamily D9C11_07340 PF00121 Triosephosphate isomerase D9C11_07345 PF00162 Phosphoglycerate kinase D9C11_07350 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain D9C11_07350 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain D9C11_07355 PF04198 Putative sugar-binding domain D9C11_07360 PF00083 Sugar (and other) transporter D9C11_07365 PF00392 Bacterial regulatory proteins, gntR family D9C11_07370 PF00296 Luciferase-like monooxygenase D9C11_07380 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D9C11_07380 PF03466 LysR substrate binding domain D9C11_07385 PF00892 EamA-like transporter family D9C11_07390 PF00324 Amino acid permease D9C11_07400 PF02589 LUD domain D9C11_07405 PF13183 4Fe-4S dicluster domain D9C11_07405 PF11870 Domain of unknown function (DUF3390) D9C11_07405 PF02589 LUD domain D9C11_07410 PF02754 Cysteine-rich domain D9C11_07415 PF00196 Bacterial regulatory proteins, luxR family D9C11_07415 PF00072 Response regulator receiver domain D9C11_07420 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D9C11_07420 PF07730 Histidine kinase D9C11_07430 PF00005 ABC transporter D9C11_07435 PF12697 Alpha/beta hydrolase family D9C11_07440 PF13426 PAS domain D9C11_07440 PF07228 Stage II sporulation protein E (SpoIIE) D9C11_07445 PF07745 Glycosyl hydrolase family 53 D9C11_07450 PF02449 Beta-galactosidase D9C11_07450 PF08533 Beta-galactosidase C-terminal domain D9C11_07450 PF08532 Beta-galactosidase trimerisation domain D9C11_07455 PF00528 Binding-protein-dependent transport system inner membrane component D9C11_07460 PF00528 Binding-protein-dependent transport system inner membrane component D9C11_07465 PF13416 Bacterial extracellular solute-binding protein D9C11_07470 PF00356 Bacterial regulatory proteins, lacI family D9C11_07475 PF07729 FCD domain D9C11_07475 PF00392 Bacterial regulatory proteins, gntR family D9C11_07480 PF02652 L-lactate permease D9C11_07485 PF04552 Sigma-54, DNA binding domain D9C11_07485 PF04963 Sigma-54 factor, core binding domain D9C11_07485 PF00309 Sigma-54 factor, Activator interacting domain (AID) D9C11_07490 PF09628 YvfG protein D9C11_07495 PF04230 Polysaccharide pyruvyl transferase D9C11_07500 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family D9C11_07505 PF00132 Bacterial transferase hexapeptide (six repeats) D9C11_07505 PF17836 PglD N-terminal domain D9C11_07510 PF02397 Bacterial sugar transferase D9C11_07515 PF01943 Polysaccharide biosynthesis protein D9C11_07515 PF14667 Polysaccharide biosynthesis C-terminal domain D9C11_07520 PF00535 Glycosyl transferase family 2 D9C11_07525 PF04230 Polysaccharide pyruvyl transferase D9C11_07530 PF00535 Glycosyl transferase family 2 D9C11_07540 PF00534 Glycosyl transferases group 1 D9C11_07540 PF13439 Glycosyltransferase Family 4 D9C11_07545 PF00535 Glycosyl transferase family 2 D9C11_07550 PF13439 Glycosyltransferase Family 4 D9C11_07550 PF00534 Glycosyl transferases group 1 D9C11_07555 PF02719 Polysaccharide biosynthesis protein D9C11_07560 PF13614 AAA domain D9C11_07565 PF02706 Chain length determinant protein D9C11_07570 PF08671 Anti-repressor SinI D9C11_07570 PF01381 Helix-turn-helix D9C11_07575 PF00135 Carboxylesterase family D9C11_07585 PF05870 Phenolic acid decarboxylase (PAD) D9C11_07600 PF01177 Asp/Glu/Hydantoin racemase D9C11_07605 PF11954 Domain of unknown function (DUF3471) D9C11_07605 PF00144 Beta-lactamase D9C11_07610 PF02435 Levansucrase/Invertase D9C11_07615 PF08244 Glycosyl hydrolases family 32 C terminal D9C11_07615 PF00251 Glycosyl hydrolases family 32 N-terminal domain D9C11_07620 PF13520 Amino acid permease D9C11_07625 PF00440 Bacterial regulatory proteins, tetR family D9C11_07625 PF17934 Tetracyclin repressor-like, C-terminal domain D9C11_07630 PF00893 Small Multidrug Resistance protein D9C11_07635 PF00893 Small Multidrug Resistance protein D9C11_07650 PF00574 Clp protease D9C11_07655 PF13419 Haloacid dehalogenase-like hydrolase D9C11_07660 PF00128 Alpha amylase, catalytic domain D9C11_07660 PF16657 Maltogenic Amylase, C-terminal domain D9C11_07665 PF03633 Glycosyl hydrolase family 65, C-terminal domain D9C11_07665 PF03636 Glycosyl hydrolase family 65, N-terminal domain D9C11_07665 PF03632 Glycosyl hydrolase family 65 central catalytic domain D9C11_07675 PF00528 Binding-protein-dependent transport system inner membrane component D9C11_07680 PF13416 Bacterial extracellular solute-binding protein D9C11_07685 PF02903 Alpha amylase, N-terminal ig-like domain D9C11_07685 PF00128 Alpha amylase, catalytic domain D9C11_07690 PF00356 Bacterial regulatory proteins, lacI family D9C11_07695 PF03641 Possible lysine decarboxylase D9C11_07705 PF00916 Sulfate permease family D9C11_07705 PF01740 STAS domain D9C11_07710 PF00484 Carbonic anhydrase D9C11_07715 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain D9C11_07715 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain D9C11_07720 PF02687 FtsX-like permease family D9C11_07725 PF00005 ABC transporter D9C11_07730 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D9C11_07735 PF00072 Response regulator receiver domain D9C11_07735 PF00486 Transcriptional regulatory protein, C terminal D9C11_07745 PF00797 N-acetyltransferase D9C11_07750 PF00381 PTS HPr component phosphorylation site D9C11_07755 PF10298 WhiA N-terminal LAGLIDADG-like domain D9C11_07755 PF02650 WhiA C-terminal HTH domain D9C11_07755 PF14527 WhiA LAGLIDADG-like domain D9C11_07760 PF01933 Uncharacterised protein family UPF0052 D9C11_07765 PF03668 P-loop ATPase protein family D9C11_07770 PF00293 NUDIX domain D9C11_07775 PF07992 Pyridine nucleotide-disulphide oxidoreductase D9C11_07780 PF00877 NlpC/P60 family D9C11_07790 PF00664 ABC transporter transmembrane region D9C11_07790 PF00005 ABC transporter D9C11_07820 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase D9C11_07820 PF01502 Phosphoribosyl-AMP cyclohydrolase D9C11_07825 PF00977 Histidine biosynthesis protein D9C11_07830 PF00977 Histidine biosynthesis protein D9C11_07835 PF00117 Glutamine amidotransferase class-I D9C11_07840 PF00475 Imidazoleglycerol-phosphate dehydratase D9C11_07845 PF00815 Histidinol dehydrogenase D9C11_07850 PF01634 ATP phosphoribosyltransferase D9C11_07855 PF13393 Histidyl-tRNA synthetase D9C11_07860 PF13529 Peptidase_C39 like family D9C11_07865 PF03211 Pectate lyase D9C11_07870 PF14602 Hexapeptide repeat of succinyl-transferase D9C11_07875 PF13419 Haloacid dehalogenase-like hydrolase D9C11_07880 PF07670 Nucleoside recognition D9C11_07885 PF01790 Prolipoprotein diacylglyceryl transferase D9C11_07890 PF02603 HPr Serine kinase N terminus D9C11_07890 PF07475 HPr Serine kinase C-terminal domain D9C11_07895 PF01979 Amidohydrolase family D9C11_07900 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase D9C11_07910 PF00149 Calcineurin-like phosphoesterase D9C11_07915 PF01047 MarR family D9C11_07920 PF07690 Major Facilitator Superfamily D9C11_07930 PF04020 Mycobacterial 4 TMS phage holin, superfamily IV D9C11_07935 PF04024 PspC domain D9C11_07940 PF13349 Putative adhesin D9C11_07955 PF00700 Bacterial flagellin C-terminal helical region D9C11_07955 PF00669 Bacterial flagellin N-terminal helical region D9C11_07960 PF00005 ABC transporter D9C11_07960 PF17755 UvrA DNA-binding domain D9C11_07960 PF17760 UvrA interaction domain D9C11_07965 PF04851 Type III restriction enzyme, res subunit D9C11_07965 PF02151 UvrB/uvrC motif D9C11_07965 PF12344 Ultra-violet resistance protein B D9C11_07965 PF17757 UvrB interaction domain D9C11_07965 PF00271 Helicase conserved C-terminal domain D9C11_07970 PF09964 Uncharacterized protein conserved in bacteria (DUF2198) D9C11_07975 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain D9C11_07975 PF00391 PEP-utilising enzyme, mobile domain D9C11_07980 PF00440 Bacterial regulatory proteins, tetR family D9C11_07985 PF07690 Major Facilitator Superfamily D9C11_07990 PF17820 PDZ domain D9C11_07995 PF17423 Swarming motility protein D9C11_08000 PF17820 PDZ domain D9C11_08000 PF01471 Putative peptidoglycan binding domain D9C11_08000 PF03572 Peptidase family S41 D9C11_08005 PF02687 FtsX-like permease family D9C11_08005 PF18075 FtsX extracellular domain D9C11_08010 PF00005 ABC transporter D9C11_08035 PF00293 NUDIX domain D9C11_08045 PF01966 HD domain D9C11_08080 PF13442 Cytochrome C oxidase, cbb3-type, subunit III D9C11_08085 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) D9C11_08085 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 D9C11_08095 PF02810 SEC-C motif D9C11_08095 PF01043 SecA preprotein cross-linking domain D9C11_08095 PF07516 SecA Wing and Scaffold domain D9C11_08095 PF07517 SecA DEAD-like domain D9C11_08105 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein D9C11_08105 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus D9C11_08120 PF02561 Flagellar protein FliS D9C11_08125 PF07195 Flagellar hook-associated protein 2 C-terminus D9C11_08125 PF02465 Flagellar hook-associated protein 2 N-terminus D9C11_08125 PF07196 Flagellin hook IN motif D9C11_08130 PF03646 FlaG protein D9C11_08135 PF00700 Bacterial flagellin C-terminal helical region D9C11_08135 PF00669 Bacterial flagellin N-terminal helical region D9C11_08140 PF02599 Global regulator protein family D9C11_08145 PF02623 FliW protein D9C11_08155 PF00669 Bacterial flagellin N-terminal helical region D9C11_08155 PF00700 Bacterial flagellin C-terminal helical region D9C11_08160 PF00460 Flagella basal body rod protein D9C11_08160 PF06429 Flagellar basal body rod FlgEFG protein C-terminal D9C11_08165 PF05130 FlgN protein D9C11_08170 PF04316 Anti-sigma-28 factor, FlgM D9C11_08190 PF04851 Type III restriction enzyme, res subunit D9C11_08190 PF00271 Helicase conserved C-terminal domain D9C11_08195 PF02645 Uncharacterised protein, DegV family COG1307 D9C11_08200 PF00072 Response regulator receiver domain D9C11_08200 PF00196 Bacterial regulatory proteins, luxR family D9C11_08205 PF05384 Sensor protein DegS D9C11_08205 PF07730 Histidine kinase D9C11_08205 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D9C11_08210 PF09186 Domain of unknown function (DUF1949) D9C11_08210 PF01205 Uncharacterized protein family UPF0029 D9C11_08215 PF03816 Cell envelope-related transcriptional attenuator domain D9C11_08220 PF00953 Glycosyl transferase family 4 D9C11_08230 PF00535 Glycosyl transferase family 2 D9C11_08235 PF02706 Chain length determinant protein D9C11_08240 PF04932 O-Antigen ligase D9C11_08250 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain D9C11_08250 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain D9C11_08250 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain D9C11_08255 PF13439 Glycosyltransferase Family 4 D9C11_08255 PF00534 Glycosyl transferases group 1 D9C11_08260 PF01943 Polysaccharide biosynthesis protein D9C11_08260 PF14667 Polysaccharide biosynthesis C-terminal domain D9C11_08265 PF02397 Bacterial sugar transferase D9C11_08270 PF01609 Transposase DDE domain D9C11_08275 PF01520 N-acetylmuramoyl-L-alanine amidase D9C11_08275 PF04122 Putative cell wall binding repeat 2 D9C11_08280 PF04122 Putative cell wall binding repeat 2 D9C11_08280 PF08486 Stage II sporulation protein D9C11_08300 PF00665 Integrase core domain D9C11_08300 PF13333 Integrase core domain D9C11_08305 PF02350 UDP-N-acetylglucosamine 2-epimerase D9C11_08310 PF00483 Nucleotidyl transferase D9C11_08320 PF00005 ABC transporter D9C11_08325 PF01061 ABC-2 type transporter D9C11_08340 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase D9C11_08340 PF00535 Glycosyl transferase family 2 D9C11_08345 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase D9C11_08350 PF01467 Cytidylyltransferase-like D9C11_08355 PF03808 Glycosyl transferase WecB/TagA/CpsF family D9C11_08360 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase D9C11_08365 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase D9C11_08365 PF05036 Sporulation related domain D9C11_08365 PF08239 Bacterial SH3 domain D9C11_08370 PF01238 Phosphomannose isomerase type I D9C11_08385 PF05504 Spore germination B3/ GerAC like, C-terminal D9C11_08390 PF00083 Sugar (and other) transporter D9C11_08395 PF03816 Cell envelope-related transcriptional attenuator domain D9C11_08405 PF00877 NlpC/P60 family D9C11_08415 PF09587 Bacterial capsule synthesis protein PGA_cap D9C11_08420 PF14102 Capsule biosynthesis CapC D9C11_08425 PF08245 Mur ligase middle domain D9C11_08435 PF00356 Bacterial regulatory proteins, lacI family D9C11_08440 PF00294 pfkB family carbohydrate kinase D9C11_08445 PF05025 RbsD / FucU transport protein family D9C11_08450 PF00005 ABC transporter D9C11_08455 PF02653 Branched-chain amino acid transport system / permease component D9C11_08460 PF13407 Periplasmic binding protein domain D9C11_08465 PF08239 Bacterial SH3 domain D9C11_08470 PF13031 Protein of unknown function (DUF3892) D9C11_08475 PF02525 Flavodoxin-like fold D9C11_08480 PF03306 Alpha-acetolactate decarboxylase D9C11_08485 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain D9C11_08485 PF00205 Thiamine pyrophosphate enzyme, central domain D9C11_08485 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain D9C11_08490 PF03466 LysR substrate binding domain D9C11_08490 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D9C11_08510 PF08757 CotH kinase protein D9C11_08520 PF01613 Flavin reductase like domain D9C11_08525 PF13789 Domain of unknown function (DUF4181) D9C11_08535 PF13404 AsnC-type helix-turn-helix domain D9C11_08535 PF01037 Lrp/AsnC ligand binding domain D9C11_08540 PF02417 Chromate transporter D9C11_08545 PF02417 Chromate transporter D9C11_08550 PF04493 Endonuclease V D9C11_08555 PF07661 MORN repeat variant D9C11_08570 PF16888 Domain of unknown function (DUF5082) D9C11_08580 PF09234 Domain of unknown function (DUF1963) D9C11_08590 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain D9C11_08590 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain D9C11_08590 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain D9C11_08600 PF13614 AAA domain D9C11_08605 PF13807 G-rich domain on putative tyrosine kinase D9C11_08605 PF02706 Chain length determinant protein D9C11_08615 PF04434 SWIM zinc finger D9C11_08620 PF00271 Helicase conserved C-terminal domain D9C11_08620 PF00176 SNF2 family N-terminal domain D9C11_08620 PF12419 SNF2 Helicase protein D9C11_08635 PF08220 DeoR-like helix-turn-helix domain D9C11_08635 PF00455 DeoR C terminal sensor domain D9C11_08640 PF00436 Single-strand binding protein family D9C11_08650 PF14183 YwpF-like protein D9C11_08655 PF04203 Sortase domain D9C11_08665 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D9C11_08665 PF06580 Histidine kinase D9C11_08670 PF01741 Large-conductance mechanosensitive channel, MscL D9C11_08675 PF07977 FabA-like domain D9C11_08680 PF18801 response regulator aspartate phosphatase H, N terminal D9C11_08685 PF00460 Flagella basal body rod protein D9C11_08685 PF06429 Flagellar basal body rod FlgEFG protein C-terminal D9C11_08690 PF00460 Flagella basal body rod protein D9C11_08690 PF06429 Flagellar basal body rod FlgEFG protein C-terminal D9C11_08700 PF12116 Stage III sporulation protein D D9C11_08710 PF01047 MarR family D9C11_08715 PF07690 Major Facilitator Superfamily D9C11_08720 PF13229 Right handed beta helix region D9C11_08725 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin D9C11_08730 PF07690 Major Facilitator Superfamily D9C11_08735 PF00857 Isochorismatase family D9C11_08745 PF00909 Ammonium Transporter Family D9C11_08750 PF00543 Nitrogen regulatory protein P-II D9C11_08755 PF01569 PAP2 superfamily D9C11_08760 PF04892 VanZ like family D9C11_08765 PF01551 Peptidase family M23 D9C11_08770 PF00583 Acetyltransferase (GNAT) family D9C11_08775 PF17319 Family of unknown function (DUF5362) D9C11_08785 PF17370 Family of unknown function (DUF5392) D9C11_08790 PF13091 PLD-like domain D9C11_08790 PF13396 Phospholipase_D-nuclease N-terminal D9C11_08795 PF13411 MerR HTH family regulatory protein D9C11_08795 PF07739 TipAS antibiotic-recognition domain D9C11_08800 PF17319 Family of unknown function (DUF5362) D9C11_08815 PF02082 Transcriptional regulator D9C11_08820 PF01979 Amidohydrolase family D9C11_08820 PF00449 Urease alpha-subunit, N-terminal domain D9C11_08825 PF00699 Urease beta subunit D9C11_08830 PF00547 Urease, gamma subunit D9C11_08845 PF05532 CsbD-like D9C11_08865 PF18801 response regulator aspartate phosphatase H, N terminal D9C11_08865 PF17874 MalT-like TPR region D9C11_08875 PF04055 Radical SAM superfamily D9C11_08875 PF06463 Molybdenum Cofactor Synthesis C D9C11_08880 PF02634 FdhD/NarQ family D9C11_08890 PF00092 von Willebrand factor type A domain D9C11_08900 PF00092 von Willebrand factor type A domain D9C11_08905 PF08486 Stage II sporulation protein D9C11_08910 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) D9C11_08915 PF08680 TATA-box binding D9C11_08920 PF06612 Protein of unknown function (DUF1146) D9C11_08930 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain D9C11_08930 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain D9C11_08935 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain D9C11_08935 PF02874 ATP synthase alpha/beta family, beta-barrel domain D9C11_08940 PF00231 ATP synthase D9C11_08945 PF02874 ATP synthase alpha/beta family, beta-barrel domain D9C11_08945 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain D9C11_08945 PF00306 ATP synthase alpha/beta chain, C terminal domain D9C11_08950 PF00213 ATP synthase delta (OSCP) subunit D9C11_08955 PF00430 ATP synthase B/B' CF(0) D9C11_08960 PF00137 ATP synthase subunit C D9C11_08965 PF00119 ATP synthase A chain D9C11_08970 PF03899 ATP synthase I chain D9C11_08980 PF00464 Serine hydroxymethyltransferase D9C11_08985 PF04260 Protein of unknown function (DUF436) D9C11_08990 PF02502 Ribose/Galactose Isomerase D9C11_08995 PF01451 Low molecular weight phosphotyrosine protein phosphatase D9C11_09000 PF02659 Putative manganese efflux pump D9C11_09005 PF03481 Putative GTP-binding controlling metal-binding D9C11_09005 PF01300 Telomere recombination D9C11_09015 PF09551 Stage II sporulation protein R (spore_II_R) D9C11_09020 PF17094 Uncharacterised protein family (UPF0715) D9C11_09025 PF17247 Family of unknown function (DUF5316) D9C11_09030 PF05175 Methyltransferase small domain D9C11_09030 PF17827 PrmC N-terminal domain D9C11_09035 PF03462 PCRF domain D9C11_09035 PF00472 RF-1 domain D9C11_09040 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily D9C11_09045 PF13411 MerR HTH family regulatory protein D9C11_09050 PF03547 Membrane transport protein D9C11_09055 PF03949 Malic enzyme, NAD binding domain D9C11_09055 PF00390 Malic enzyme, N-terminal domain D9C11_09060 PF00265 Thymidine kinase D9C11_09065 PF01197 Ribosomal protein L31 D9C11_09070 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain D9C11_09070 PF07498 Rho termination factor, N-terminal domain D9C11_09070 PF07497 Rho termination factor, RNA-binding domain D9C11_09080 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded D9C11_09085 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) D9C11_09090 PF00923 Transaldolase/Fructose-6-phosphate aldolase D9C11_09095 PF01116 Fructose-bisphosphate aldolase class-II D9C11_09100 PF00072 Response regulator receiver domain D9C11_09105 PF10740 Domain of unknown function (DUF2529) D9C11_09115 PF00117 Glutamine amidotransferase class-I D9C11_09115 PF06418 CTP synthase N-terminus D9C11_09120 PF05066 HB1, ASXL, restriction endonuclease HTH domain D9C11_09125 PF02771 Acyl-CoA dehydrogenase, N-terminal domain D9C11_09125 PF02770 Acyl-CoA dehydrogenase, middle domain D9C11_09125 PF00441 Acyl-CoA dehydrogenase, C-terminal domain D9C11_09130 PF02754 Cysteine-rich domain D9C11_09130 PF13183 4Fe-4S dicluster domain D9C11_09135 PF13091 PLD-like domain D9C11_09140 PF03851 UV-endonuclease UvdE D9C11_09155 PF03485 Arginyl tRNA synthetase N terminal domain D9C11_09155 PF00750 tRNA synthetases class I (R) D9C11_09155 PF05746 DALR anticodon binding domain D9C11_09160 PF09148 Domain of unknown function (DUF1934) D9C11_09165 PF11420 Bacteriocin subtilosin A D9C11_09175 PF05402 Coenzyme PQQ synthesis protein D (PqqD) D9C11_09175 PF13186 Iron-sulfur cluster-binding domain D9C11_09175 PF04055 Radical SAM superfamily D9C11_09185 PF00005 ABC transporter D9C11_09195 PF05193 Peptidase M16 inactive domain D9C11_09200 PF00675 Insulinase (Peptidase family M16) D9C11_09225 PF18801 response regulator aspartate phosphatase H, N terminal D9C11_09240 PF00491 Arginase family D9C11_09245 PF17284 Spermidine synthase tetramerisation domain D9C11_09250 PF00905 Penicillin binding protein transpeptidase domain D9C11_09250 PF00912 Transglycosylase D9C11_09260 PF08741 YwhD family D9C11_09265 PF02163 Peptidase family M50 D9C11_09270 PF01361 Tautomerase enzyme D9C11_09275 PF01047 MarR family D9C11_09280 PF03129 Anticodon binding domain D9C11_09280 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain D9C11_09280 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) D9C11_09280 PF02824 TGS domain D9C11_09290 PF07690 Major Facilitator Superfamily D9C11_09295 PF02082 Transcriptional regulator D9C11_09305 PF01966 HD domain D9C11_09310 PF07293 Protein of unknown function (DUF1450) D9C11_09320 PF00892 EamA-like transporter family D9C11_09325 PF03099 Biotin/lipoate A/B protein ligase family D9C11_09330 PF03466 LysR substrate binding domain D9C11_09330 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D9C11_09335 PF01515 Phosphate acetyl/butaryl transferase D9C11_09350 PF00155 Aminotransferase class I and II D9C11_09365 PF00324 Amino acid permease D9C11_09370 PF01546 Peptidase family M20/M25/M40 D9C11_09375 PF00171 Aldehyde dehydrogenase family D9C11_09380 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase D9C11_09380 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain D9C11_09385 PF17735 Biofilm surface layer A D9C11_09390 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase D9C11_09395 PF04321 RmlD substrate binding domain D9C11_09400 PF16363 GDP-mannose 4,6 dehydratase D9C11_09405 PF00483 Nucleotidyl transferase D9C11_09410 PF04101 Glycosyltransferase family 28 C-terminal domain D9C11_09415 PF02348 Cytidylyltransferase D9C11_09420 PF08666 SAF domain D9C11_09420 PF03102 NeuB family D9C11_09425 PF00583 Acetyltransferase (GNAT) family D9C11_09430 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family D9C11_09435 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase D9C11_09440 PF00535 Glycosyl transferase family 2 D9C11_09450 PF09671 Spore coat protein (Spore_GerQ) D9C11_09455 PF04241 Protein of unknown function (DUF423) D9C11_09460 PF00860 Permease family D9C11_09465 PF17261 Family of unknown function (DUF5327) D9C11_09470 PF00171 Aldehyde dehydrogenase family D9C11_09475 PF03167 Uracil DNA glycosylase superfamily D9C11_09480 PF00535 Glycosyl transferase family 2 D9C11_09495 PF03551 Transcriptional regulator PadR-like family D9C11_09500 PF08543 Phosphomethylpyrimidine kinase D9C11_09510 PF00251 Glycosyl hydrolases family 32 N-terminal domain D9C11_09510 PF08244 Glycosyl hydrolases family 32 C terminal D9C11_09515 PF02378 Phosphotransferase system, EIIC D9C11_09515 PF00367 phosphotransferase system, EIIB D9C11_09520 PF01226 Formate/nitrite transporter D9C11_09525 PF03123 CAT RNA binding domain D9C11_09525 PF00874 PRD domain D9C11_09545 PF00881 Nitroreductase family D9C11_09550 PF01098 Cell cycle protein D9C11_09555 PF17368 Spore morphogenesis and germination YwcE D9C11_09560 PF03626 Prokaryotic Cytochrome C oxidase subunit IV D9C11_09565 PF00510 Cytochrome c oxidase subunit III D9C11_09570 PF00115 Cytochrome C and Quinol oxidase polypeptide I D9C11_09575 PF00116 Cytochrome C oxidase subunit II, periplasmic domain D9C11_09575 PF02790 Cytochrome C oxidase subunit II, transmembrane domain D9C11_09580 PF04226 Transglycosylase associated protein D9C11_09585 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain D9C11_09585 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain D9C11_09590 PF00288 GHMP kinases N terminal domain D9C11_09590 PF08544 GHMP kinases C terminal D9C11_09590 PF10509 Galactokinase galactose-binding signature D9C11_09595 PF04138 GtrA-like protein D9C11_09600 PF00440 Bacterial regulatory proteins, tetR family D9C11_09605 PF08671 Anti-repressor SinI D9C11_09610 PF04341 Protein of unknown function, DUF485 D9C11_09615 PF00474 Sodium:solute symporter family D9C11_09620 PF01323 DSBA-like thioredoxin domain D9C11_09625 PF04261 Dyp-type peroxidase family D9C11_09625 PF10518 TAT (twin-arginine translocation) pathway signal sequence D9C11_09630 PF09375 Imelysin D9C11_09635 PF03239 Iron permease FTR1 family D9C11_09640 PF02581 Thiamine monophosphate synthase D9C11_09645 PF02110 Hydroxyethylthiazole kinase family D9C11_09650 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D9C11_09650 PF03466 LysR substrate binding domain D9C11_09655 PF03788 LrgA family D9C11_09660 PF04172 LrgB-like family D9C11_09665 PF12832 MFS_1 like family D9C11_09670 PF09962 Uncharacterized conserved protein (DUF2196) D9C11_09675 PF17785 PUA-like domain D9C11_09675 PF10672 S-adenosylmethionine-dependent methyltransferase D9C11_09680 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily D9C11_09685 PF10924 Protein of unknown function (DUF2711) D9C11_09690 PF02378 Phosphotransferase system, EIIC D9C11_09695 PF00082 Subtilase family D9C11_09700 PF00367 phosphotransferase system, EIIB D9C11_09700 PF02378 Phosphotransferase system, EIIC D9C11_09705 PF03123 CAT RNA binding domain D9C11_09705 PF00874 PRD domain D9C11_09710 PF01501 Glycosyl transferase family 8 D9C11_09720 PF01047 MarR family D9C11_09725 PF00579 tRNA synthetases class I (W and Y) D9C11_09725 PF01479 S4 domain D9C11_09735 PF04607 Region found in RelA / SpoT proteins D9C11_09745 PF01040 UbiA prenyltransferase family D9C11_09760 PF12459 D-Ala-teichoic acid biosynthesis protein D9C11_09765 PF00501 AMP-binding enzyme D9C11_09765 PF13193 AMP-binding enzyme C-terminal domain D9C11_09770 PF03062 MBOAT, membrane-bound O-acyltransferase family D9C11_09775 PF00550 Phosphopantetheine attachment site D9C11_09780 PF04914 DltD protein D9C11_09790 PF01063 Amino-transferase class IV D9C11_09795 PF11975 Family 4 glycosyl hydrolase C-terminal domain D9C11_09795 PF02056 Family 4 glycosyl hydrolase D9C11_09800 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit D9C11_09805 PF02378 Phosphotransferase system, EIIC D9C11_09810 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit D9C11_09815 PF08279 HTH domain D9C11_09815 PF05043 Mga helix-turn-helix domain D9C11_09815 PF00874 PRD domain D9C11_09815 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 D9C11_09825 PF02245 Methylpurine-DNA glycosylase (MPG) D9C11_09830 PF06628 Catalase-related immune-responsive D9C11_09830 PF00199 Catalase D9C11_09840 PF00005 ABC transporter D9C11_09840 PF13732 Domain of unknown function (DUF4162) D9C11_09845 PF13396 Phospholipase_D-nuclease N-terminal D9C11_09855 PF17280 Family of unknown function (DUF5345) D9C11_09860 PF08281 Sigma-70, region 4 D9C11_09860 PF04542 Sigma-70 region 2 D9C11_09865 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin D9C11_09870 PF01256 Carbohydrate kinase D9C11_09875 PF00005 ABC transporter D9C11_09875 PF00664 ABC transporter transmembrane region D9C11_09880 PF00005 ABC transporter D9C11_09880 PF00664 ABC transporter transmembrane region D9C11_09885 PF02322 Cytochrome bd terminal oxidase subunit II D9C11_09890 PF01654 Cytochrome bd terminal oxidase subunit I D9C11_09895 PF03390 2-hydroxycarboxylate transporter family D9C11_09900 PF01435 Peptidase family M48 D9C11_09910 PF01522 Polysaccharide deacetylase D9C11_09915 PF17912 MalK OB fold domain D9C11_09915 PF00005 ABC transporter D9C11_09915 PF03459 TOBE domain D9C11_09920 PF13556 PucR C-terminal helix-turn-helix domain D9C11_09925 PF00171 Aldehyde dehydrogenase family D9C11_09930 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 D9C11_09930 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) D9C11_09940 PF11611 Domain of unknown function (DUF4352) D9C11_09945 PF16363 GDP-mannose 4,6 dehydratase D9C11_09955 PF07730 Histidine kinase D9C11_09960 PF00072 Response regulator receiver domain D9C11_09960 PF00196 Bacterial regulatory proteins, luxR family D9C11_09965 PF01546 Peptidase family M20/M25/M40 D9C11_09965 PF07687 Peptidase dimerisation domain D9C11_09975 PF04525 LURP-one-related D9C11_09980 PF01717 Cobalamin-independent synthase, Catalytic domain D9C11_09985 PF01717 Cobalamin-independent synthase, Catalytic domain D9C11_09995 PF01144 Coenzyme A transferase D9C11_10000 PF01144 Coenzyme A transferase D9C11_10010 PF08241 Methyltransferase domain D9C11_10015 PF07662 Na+ dependent nucleoside transporter C-terminus D9C11_10015 PF01773 Na+ dependent nucleoside transporter N-terminus D9C11_10030 PF00199 Catalase D9C11_10030 PF18011 C-terminal domain found in long catalases D9C11_10030 PF06628 Catalase-related immune-responsive D9C11_10035 PF03600 Citrate transporter D9C11_10040 PF00722 Glycosyl hydrolases family 16 D9C11_10055 PF11700 Vacuole effluxer Atg22 like D9C11_10060 PF03880 DbpA RNA binding domain D9C11_10060 PF00271 Helicase conserved C-terminal domain D9C11_10060 PF00270 DEAD/DEAH box helicase D9C11_10065 PF13472 GDSL-like Lipase/Acylhydrolase family D9C11_10080 PF14176 YxiJ-like protein D9C11_10100 PF10898 Protein of unknown function (DUF2716) D9C11_10175 PF14176 YxiJ-like protein D9C11_10180 PF05593 RHS Repeat D9C11_10185 PF00892 EamA-like transporter family D9C11_10190 PF00582 Universal stress protein family D9C11_10210 PF14449 Pre-toxin TG D9C11_10210 PF04740 LXG domain of WXG superfamily D9C11_10220 PF16888 Domain of unknown function (DUF5082) D9C11_10240 PF00591 Glycosyl transferase family, a/b domain D9C11_10240 PF02885 Glycosyl transferase family, helical bundle domain D9C11_10240 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain D9C11_10245 PF01773 Na+ dependent nucleoside transporter N-terminus D9C11_10245 PF07662 Na+ dependent nucleoside transporter C-terminus D9C11_10250 PF01791 DeoC/LacD family aldolase D9C11_10255 PF04198 Putative sugar-binding domain D9C11_10285 PF00005 ABC transporter D9C11_10305 PF06724 Domain of Unknown Function (DUF1206) D9C11_10310 PF04346 Ethanolamine utilisation protein, EutH D9C11_10315 PF03972 MmgE/PrpD family D9C11_10325 PF00005 ABC transporter D9C11_10330 PF00528 Binding-protein-dependent transport system inner membrane component D9C11_10335 PF00497 Bacterial extracellular solute-binding proteins, family 3 D9C11_10350 PF02275 Linear amide C-N hydrolases, choloylglycine hydrolase family D9C11_10365 PF11631 Protein of unknown function (DUF3255) D9C11_10385 PF01497 Periplasmic binding protein D9C11_10390 PF06486 Protein of unknown function (DUF1093) D9C11_10395 PF02687 FtsX-like permease family D9C11_10400 PF00005 ABC transporter D9C11_10405 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D9C11_10415 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D9C11_10415 PF00512 His Kinase A (phospho-acceptor) domain D9C11_10420 PF00486 Transcriptional regulatory protein, C terminal D9C11_10420 PF00072 Response regulator receiver domain D9C11_10425 PF00005 ABC transporter D9C11_10450 PF02441 Flavoprotein D9C11_10460 PF00664 ABC transporter transmembrane region D9C11_10460 PF00005 ABC transporter D9C11_10460 PF03412 Peptidase C39 family D9C11_10465 PF01116 Fructose-bisphosphate aldolase class-II D9C11_10470 PF01261 Xylose isomerase-like TIM barrel D9C11_10475 PF01261 Xylose isomerase-like TIM barrel D9C11_10480 PF02894 Oxidoreductase family, C-terminal alpha/beta domain D9C11_10480 PF01408 Oxidoreductase family, NAD-binding Rossmann fold D9C11_10490 PF01261 Xylose isomerase-like TIM barrel D9C11_10495 PF00205 Thiamine pyrophosphate enzyme, central domain D9C11_10495 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain D9C11_10495 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain D9C11_10500 PF00294 pfkB family carbohydrate kinase D9C11_10505 PF04962 KduI/IolB family D9C11_10510 PF00171 Aldehyde dehydrogenase family D9C11_10515 PF00455 DeoR C terminal sensor domain D9C11_10515 PF08220 DeoR-like helix-turn-helix domain D9C11_10520 PF00248 Aldo/keto reductase family D9C11_10530 PF10850 Protein of unknown function (DUF2653) D9C11_10540 PF00183 Hsp90 protein D9C11_10575 PF01609 Transposase DDE domain D9C11_10585 PF00664 ABC transporter transmembrane region D9C11_10585 PF00005 ABC transporter D9C11_10585 PF03412 Peptidase C39 family D9C11_10605 PF07883 Cupin domain D9C11_10610 PF00440 Bacterial regulatory proteins, tetR family D9C11_10615 PF00106 short chain dehydrogenase D9C11_10620 PF01047 MarR family D9C11_10625 PF03788 LrgA family D9C11_10630 PF04172 LrgB-like family D9C11_10635 PF04230 Polysaccharide pyruvyl transferase D9C11_10640 PF02595 Glycerate kinase family D9C11_10645 PF00392 Bacterial regulatory proteins, gntR family D9C11_10645 PF07729 FCD domain D9C11_10650 PF02782 FGGY family of carbohydrate kinases, C-terminal domain D9C11_10650 PF00370 FGGY family of carbohydrate kinases, N-terminal domain D9C11_10655 PF02447 GntP family permease D9C11_10660 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase D9C11_10660 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain D9C11_10665 PF00578 AhpC/TSA family D9C11_10670 PF07992 Pyridine nucleotide-disulphide oxidoreductase D9C11_10670 PF13192 Thioredoxin domain D9C11_10675 PF00232 Glycosyl hydrolase family 1 D9C11_10680 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 D9C11_10690 PF07702 UTRA domain D9C11_10690 PF00392 Bacterial regulatory proteins, gntR family D9C11_10705 PF00005 ABC transporter D9C11_10710 PF06874 Firmicute fructose-1,6-bisphosphatase D9C11_10725 PF00011 Hsp20/alpha crystallin family D9C11_10745 PF00665 Integrase core domain D9C11_10760 PF00580 UvrD/REP helicase N-terminal domain D9C11_10760 PF13361 UvrD-like helicase C-terminal domain D9C11_10815 PF02590 Predicted SPOUT methyltransferase D9C11_10820 PF14116 YyzF-like protein D9C11_10830 PF08240 Alcohol dehydrogenase GroES-like domain D9C11_10830 PF00107 Zinc-binding dehydrogenase D9C11_10840 PF10852 Protein of unknown function (DUF2651) D9C11_10855 PF00583 Acetyltransferase (GNAT) family D9C11_10860 PF18801 response regulator aspartate phosphatase H, N terminal D9C11_10870 PF00491 Arginase family D9C11_10875 PF00324 Amino acid permease D9C11_10880 PF00202 Aminotransferase class-III D9C11_10885 PF00158 Sigma-54 interaction domain D9C11_10885 PF02954 Bacterial regulatory protein, Fis family D9C11_10885 PF13426 PAS domain D9C11_10900 PF13180 PDZ domain D9C11_10905 PF00753 Metallo-beta-lactamase superfamily D9C11_10910 PF09648 YycH protein D9C11_10915 PF07435 YycH protein D9C11_10920 PF00512 His Kinase A (phospho-acceptor) domain D9C11_10920 PF00672 HAMP domain D9C11_10920 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D9C11_10920 PF13426 PAS domain D9C11_10925 PF00486 Transcriptional regulatory protein, C terminal D9C11_10925 PF00072 Response regulator receiver domain D9C11_10950 PF00709 Adenylosuccinate synthetase D9C11_10955 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily D9C11_10960 PF03796 DnaB-like helicase C terminal domain D9C11_10960 PF00772 DnaB-like helicase N terminal domain D9C11_10965 PF09954 Uncharacterized protein conserved in bacteria (DUF2188) D9C11_10975 PF14174 YycC-like protein D9C11_10980 PF07690 Major Facilitator Superfamily D9C11_10985 PF13231 Dolichyl-phosphate-mannose-protein mannosyltransferase D9C11_10990 PF03948 Ribosomal protein L9, C-terminal domain D9C11_10990 PF01281 Ribosomal protein L9, N-terminal domain D9C11_10995 PF02272 DHHA1 domain D9C11_10995 PF01368 DHH family D9C11_11000 PF09991 Predicted membrane protein (DUF2232) D9C11_11015 PF01638 HxlR-like helix-turn-helix D9C11_11020 PF01368 DHH family D9C11_11020 PF02833 DHHA2 domain D9C11_11035 PF07690 Major Facilitator Superfamily D9C11_11040 PF06445 GyrI-like small molecule binding domain D9C11_11040 PF13411 MerR HTH family regulatory protein D9C11_11050 PF00872 Transposase, Mutator family D9C11_11060 PF13474 SnoaL-like domain D9C11_11065 PF00805 Pentapeptide repeats (8 copies) D9C11_11080 PF01047 MarR family D9C11_11085 PF13673 Acetyltransferase (GNAT) domain D9C11_11095 PF00583 Acetyltransferase (GNAT) family D9C11_11105 PF01872 RibD C-terminal domain D9C11_11115 PF06445 GyrI-like small molecule binding domain D9C11_11120 PF03190 Protein of unknown function, DUF255 D9C11_11125 PF02517 CPBP intramembrane metalloprotease D9C11_11130 PF00083 Sugar (and other) transporter D9C11_11135 PF14602 Hexapeptide repeat of succinyl-transferase D9C11_11135 PF12464 Maltose acetyltransferase D9C11_11140 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily D9C11_11150 PF03372 Endonuclease/Exonuclease/phosphatase family D9C11_11155 PF01084 Ribosomal protein S18 D9C11_11160 PF00436 Single-strand binding protein family D9C11_11165 PF01250 Ribosomal protein S6 D9C11_11170 PF06071 Protein of unknown function (DUF933) D9C11_11170 PF01926 50S ribosome-binding GTPase D9C11_11175 PF04879 Molybdopterin oxidoreductase Fe4S4 domain D9C11_11175 PF00384 Molybdopterin oxidoreductase D9C11_11175 PF01568 Molydopterin dinucleotide binding domain D9C11_11180 PF06107 Bacterial protein of unknown function (DUF951) D9C11_11190 PF06866 Protein of unknown function (DUF1256) D9C11_11200 PF17762 HTH domain found in ParB protein D9C11_11200 PF02195 ParB-like nuclease domain D9C11_11205 PF13614 AAA domain D9C11_11210 PF06713 Bacterial PH domain D9C11_11215 PF17762 HTH domain found in ParB protein D9C11_11215 PF02195 ParB-like nuclease domain D9C11_11220 PF02527 rRNA small subunit methyltransferase G D9C11_11225 PF01134 Glucose inhibited division protein A D9C11_11225 PF13932 GidA associated domain D9C11_11230 PF12631 MnmE helical domain D9C11_11230 PF10396 GTP-binding protein TrmE N-terminus D9C11_11230 PF01926 50S ribosome-binding GTPase D9C11_11235 PF01424 R3H domain D9C11_11235 PF14804 Jag N-terminus D9C11_11240 PF02096 60Kd inner membrane protein D9C11_11245 PF00825 Ribonuclease P D9C11_11250 PF00468 Ribosomal protein L34 D9C11_11255 PF08299 Bacterial dnaA protein helix-turn-helix D9C11_11255 PF11638 DnaA N-terminal domain D9C11_11255 PF00308 Bacterial dnaA protein D9C11_11260 PF02768 DNA polymerase III beta subunit, C-terminal domain D9C11_11260 PF00712 DNA polymerase III beta subunit, N-terminal domain D9C11_11260 PF02767 DNA polymerase III beta subunit, central domain D9C11_11270 PF02463 RecF/RecN/SMC N terminal domain D9C11_11275 PF04025 Domain of unknown function (DUF370) D9C11_11280 PF00204 DNA gyrase B D9C11_11280 PF00986 DNA gyrase B subunit, carboxyl terminus D9C11_11280 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D9C11_11280 PF01751 Toprim domain D9C11_11285 PF03989 DNA gyrase C-terminal domain, beta-propeller D9C11_11285 PF00521 DNA gyrase/topoisomerase IV, subunit A D9C11_11315 PF14175 YaaC-like Protein D9C11_11320 PF00571 CBS domain D9C11_11320 PF00478 IMP dehydrogenase / GMP reductase domain D9C11_11325 PF00768 D-alanyl-D-alanine carboxypeptidase D9C11_11325 PF07943 Penicillin-binding protein 5, C-terminal domain D9C11_11330 PF01680 SOR/SNZ family D9C11_11335 PF01174 SNO glutamine amidotransferase family D9C11_11340 PF02403 Seryl-tRNA synthetase N-terminal domain D9C11_11340 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) D9C11_11350 PF01712 Deoxynucleoside kinase D9C11_11355 PF01712 Deoxynucleoside kinase D9C11_11360 PF00704 Glycosyl hydrolases family 18 D9C11_11360 PF01476 LysM domain D9C11_11365 PF00857 Isochorismatase family D9C11_11370 PF14437 MafB19-like deaminase D9C11_11380 PF12169 DNA polymerase III subunits gamma and tau domain III D9C11_11385 PF02575 YbaB/EbfC DNA-binding family D9C11_11390 PF02132 RecR protein D9C11_11390 PF13662 Toprim domain D9C11_11395 PF10704 Protein of unknown function (DUF2508) D9C11_11400 PF07441 SigmaK-factor processing regulatory protein BofA D9C11_11430 PF10764 Inhibitor of sigma-G Gin D9C11_11435 PF10112 5-bromo-4-chloroindolyl phosphate hydrolysis protein D9C11_11440 PF05816 Toxic anion resistance protein (TelA) D9C11_11445 PF01276 Orn/Lys/Arg decarboxylase, major domain D9C11_11445 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain D9C11_11450 PF02223 Thymidylate kinase D9C11_11455 PF06153 Cyclic-di-AMP receptor D9C11_11460 PF03885 Protein of unknown function (DUF327) D9C11_11465 PF09115 DNA polymerase III, delta subunit, C terminal D9C11_11470 PF04468 PSP1 C-terminal conserved region D9C11_11475 PF06156 Initiation control protein YabA D9C11_11480 PF05175 Methyltransferase small domain D9C11_11485 PF01541 GIY-YIG catalytic domain D9C11_11490 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases D9C11_11495 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin D9C11_11495 PF18277 AbrB C-terminal domain D9C11_11500 PF09334 tRNA synthetases class I (M) D9C11_11500 PF01588 Putative tRNA binding domain D9C11_11500 PF08264 Anticodon-binding domain of tRNA D9C11_11505 PF01026 TatD related DNase D9C11_11510 PF03990 G5-linked-Ubiquitin-like domain D9C11_11510 PF07501 G5 domain D9C11_11510 PF06725 3D domain D9C11_11515 PF13662 Toprim domain D9C11_11515 PF13331 Domain of unknown function (DUF4093) D9C11_11520 PF00398 Ribosomal RNA adenine dimethylase D9C11_11525 PF05582 YabG peptidase U57 D9C11_11530 PF06257 Biofilm formation stimulator VEG D9C11_11535 PF00269 Small, acid-soluble spore proteins, alpha/beta type D9C11_11540 PF00288 GHMP kinases N terminal domain D9C11_11540 PF08544 GHMP kinases C terminal D9C11_11545 PF09182 Bacterial purine repressor, N-terminal D9C11_11545 PF00156 Phosphoribosyl transferase domain D9C11_11550 PF01042 Endoribonuclease L-PSP D9C11_11555 PF04026 SpoVG D9C11_11560 PF00483 Nucleotidyl transferase D9C11_11560 PF00132 Bacterial transferase hexapeptide (six repeats) D9C11_11565 PF14572 Phosphoribosyl synthetase-associated domain D9C11_11565 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase D9C11_11570 PF01386 Ribosomal L25p family D9C11_11570 PF14693 Ribosomal protein TL5, C-terminal domain D9C11_11575 PF01195 Peptidyl-tRNA hydrolase D9C11_11580 PF10955 Protein of unknown function (DUF2757) D9C11_11585 PF17757 UvrB interaction domain D9C11_11585 PF03461 TRCF domain D9C11_11585 PF00270 DEAD/DEAH box helicase D9C11_11585 PF00271 Helicase conserved C-terminal domain D9C11_11585 PF02559 CarD-like/TRCF domain D9C11_11590 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin D9C11_11590 PF15714 Stage V sporulation protein T C-terminal, transcription factor D9C11_11595 PF01943 Polysaccharide biosynthesis protein D9C11_11595 PF14667 Polysaccharide biosynthesis C-terminal domain D9C11_11600 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases D9C11_11600 PF03819 MazG nucleotide pyrophosphohydrolase domain D9C11_11605 PF01479 S4 domain D9C11_11610 PF07873 YabP family D9C11_11615 PF09578 Spore cortex protein YabQ (Spore_YabQ) D9C11_11620 PF04977 Septum formation initiator D9C11_11625 PF00575 S1 RNA binding domain D9C11_11640 PF07228 Stage II sporulation protein E (SpoIIE) D9C11_11645 PF00092 von Willebrand factor type A domain D9C11_11650 PF00069 Protein kinase domain D9C11_11655 PF09179 TilS substrate binding domain D9C11_11655 PF11734 TilS substrate C-terminal domain D9C11_11655 PF01171 PP-loop family D9C11_11665 PF17862 AAA+ lid domain D9C11_11665 PF00004 ATPase family associated with various cellular activities (AAA) D9C11_11665 PF06480 FtsH Extracellular D9C11_11665 PF01434 Peptidase family M41 D9C11_11670 PF03309 Type III pantothenate kinase D9C11_11675 PF01430 Hsp33 protein D9C11_11680 PF13145 PPIC-type PPIASE domain D9C11_11685 PF00291 Pyridoxal-phosphate dependent enzyme D9C11_11690 PF04715 Anthranilate synthase component I, N terminal region D9C11_11690 PF00425 chorismate binding enzyme D9C11_11695 PF00117 Glutamine amidotransferase class-I D9C11_11700 PF01063 Amino-transferase class IV D9C11_11705 PF00809 Pterin binding enzyme D9C11_11710 PF02152 Dihydroneopterin aldolase D9C11_11715 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) D9C11_11720 PF01381 Helix-turn-helix D9C11_11725 PF01207 Dihydrouridine synthase (Dus) D9C11_11730 PF01336 OB-fold nucleic acid binding domain D9C11_11730 PF00152 tRNA synthetases class II (D, K and N) D9C11_11810 PF05848 CtsR N-terminal HTH domain D9C11_11810 PF17727 CtsR C-terminal dimerization domain D9C11_11815 PF02151 UvrB/uvrC motif D9C11_11820 PF00217 ATP:guanido phosphotransferase, C-terminal catalytic domain D9C11_11825 PF07724 AAA domain (Cdc48 subfamily) D9C11_11825 PF17871 AAA lid domain D9C11_11825 PF02861 Clp amino terminal domain, pathogenicity island component D9C11_11825 PF10431 C-terminal, D2-small domain, of ClpB protein D9C11_11825 PF00004 ATPase family associated with various cellular activities (AAA) D9C11_11830 PF18073 Rubredoxin metal binding domain D9C11_11835 PF10635 DisA bacterial checkpoint controller linker region D9C11_11835 PF02457 DisA bacterial checkpoint controller nucleotide-binding D9C11_11845 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase D9C11_11850 PF02542 YgbB family D9C11_11855 PF00749 tRNA synthetases class I (E and Q), catalytic domain D9C11_11865 PF00132 Bacterial transferase hexapeptide (six repeats) D9C11_11865 PF06426 Serine acetyltransferase, N-terminal D9C11_11870 PF09190 DALR domain D9C11_11870 PF01406 tRNA synthetases class I (C) catalytic domain D9C11_11875 PF00636 Ribonuclease III domain D9C11_11880 PF08032 RNA 2'-O ribose methyltransferase substrate binding D9C11_11880 PF00588 SpoU rRNA Methylase family D9C11_11885 PF05991 YacP-like NYN domain D9C11_11890 PF04542 Sigma-70 region 2 D9C11_11890 PF08281 Sigma-70, region 4 D9C11_11895 PF00471 Ribosomal protein L33 D9C11_11900 PF00584 SecE/Sec61-gamma subunits of protein translocation complex D9C11_11905 PF00467 KOW motif D9C11_11905 PF02357 Transcription termination factor nusG D9C11_11910 PF00298 Ribosomal protein L11, RNA binding domain D9C11_11910 PF03946 Ribosomal protein L11, N-terminal domain D9C11_11915 PF00687 Ribosomal protein L1p/L10e family D9C11_11920 PF00466 Ribosomal protein L10 D9C11_11925 PF16320 Ribosomal protein L7/L12 dimerisation domain D9C11_11925 PF00542 Ribosomal protein L7/L12 C-terminal domain D9C11_11930 PF05175 Methyltransferase small domain D9C11_11935 PF04561 RNA polymerase Rpb2, domain 2 D9C11_11935 PF04560 RNA polymerase Rpb2, domain 7 D9C11_11935 PF00562 RNA polymerase Rpb2, domain 6 D9C11_11935 PF10385 RNA polymerase beta subunit external 1 domain D9C11_11935 PF04565 RNA polymerase Rpb2, domain 3 D9C11_11935 PF04563 RNA polymerase beta subunit D9C11_11940 PF04997 RNA polymerase Rpb1, domain 1 D9C11_11940 PF04983 RNA polymerase Rpb1, domain 3 D9C11_11940 PF00623 RNA polymerase Rpb1, domain 2 D9C11_11940 PF04998 RNA polymerase Rpb1, domain 5 D9C11_11940 PF05000 RNA polymerase Rpb1, domain 4 D9C11_11945 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family D9C11_11950 PF00164 Ribosomal protein S12/S23 D9C11_11955 PF00177 Ribosomal protein S7p/S5e D9C11_11960 PF14492 Elongation Factor G, domain II D9C11_11960 PF03144 Elongation factor Tu domain 2 D9C11_11960 PF00009 Elongation factor Tu GTP binding domain D9C11_11960 PF00679 Elongation factor G C-terminus D9C11_11960 PF03764 Elongation factor G, domain IV D9C11_11965 PF00009 Elongation factor Tu GTP binding domain D9C11_11965 PF03143 Elongation factor Tu C-terminal domain D9C11_11965 PF03144 Elongation factor Tu domain 2 D9C11_11970 PF12146 Serine aminopeptidase, S33 D9C11_11975 PF00338 Ribosomal protein S10p/S20e D9C11_11980 PF00297 Ribosomal protein L3 D9C11_11985 PF00573 Ribosomal protein L4/L1 family D9C11_11990 PF00276 Ribosomal protein L23 D9C11_11995 PF00181 Ribosomal Proteins L2, RNA binding domain D9C11_11995 PF03947 Ribosomal Proteins L2, C-terminal domain D9C11_12000 PF00203 Ribosomal protein S19 D9C11_12005 PF00237 Ribosomal protein L22p/L17e D9C11_12010 PF07650 KH domain D9C11_12010 PF00189 Ribosomal protein S3, C-terminal domain D9C11_12015 PF00252 Ribosomal protein L16p/L10e D9C11_12020 PF00831 Ribosomal L29 protein D9C11_12025 PF00366 Ribosomal protein S17 D9C11_12030 PF00238 Ribosomal protein L14p/L23e D9C11_12035 PF00467 KOW motif D9C11_12035 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 D9C11_12040 PF00673 ribosomal L5P family C-terminus D9C11_12040 PF00281 Ribosomal protein L5 D9C11_12045 PF00253 Ribosomal protein S14p/S29e D9C11_12050 PF00410 Ribosomal protein S8 D9C11_12055 PF00347 Ribosomal protein L6 D9C11_12060 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast D9C11_12065 PF03719 Ribosomal protein S5, C-terminal domain D9C11_12065 PF00333 Ribosomal protein S5, N-terminal domain D9C11_12070 PF00327 Ribosomal protein L30p/L7e D9C11_12080 PF00344 SecY translocase D9C11_12085 PF05191 Adenylate kinase, active site lid D9C11_12090 PF00557 Metallopeptidase family M24 D9C11_12100 PF01176 Translation initiation factor 1A / IF-1 D9C11_12105 PF00444 Ribosomal protein L36 D9C11_12110 PF00416 Ribosomal protein S13/S18 D9C11_12115 PF00411 Ribosomal protein S11 D9C11_12120 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain D9C11_12120 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain D9C11_12120 PF01000 RNA polymerase Rpb3/RpoA insert domain D9C11_12125 PF01196 Ribosomal protein L17 D9C11_12130 PF00005 ABC transporter D9C11_12135 PF00005 ABC transporter D9C11_12140 PF02361 Cobalt transport protein D9C11_12145 PF01416 tRNA pseudouridine synthase D9C11_12150 PF00572 Ribosomal protein L13 D9C11_12155 PF00380 Ribosomal protein S9/S16 D9C11_12160 PF08241 Methyltransferase domain D9C11_12165 PF10730 Protein of unknown function (DUF2521) D9C11_12170 PF01520 N-acetylmuramoyl-L-alanine amidase D9C11_12175 PF10609 NUBPL iron-transfer P-loop NTPase D9C11_12180 PF17898 Spore germination GerD central core domain D9C11_12185 PF14089 KinB-signalling pathway activation in sporulation D9C11_12190 PF01522 Polysaccharide deacetylase D9C11_12275 PF00916 Sulfate permease family D9C11_12275 PF01740 STAS domain D9C11_12280 PF01758 Sodium Bile acid symporter family D9C11_12285 PF00756 Putative esterase D9C11_12290 PF01032 FecCD transport family D9C11_12295 PF01032 FecCD transport family D9C11_12300 PF01497 Periplasmic binding protein D9C11_12305 PF12833 Helix-turn-helix domain D9C11_12305 PF01497 Periplasmic binding protein D9C11_12310 PF07075 Protein of unknown function (DUF1343) D9C11_12315 PF00933 Glycosyl hydrolase family 3 N terminal domain D9C11_12315 PF01915 Glycosyl hydrolase family 3 C-terminal domain D9C11_12320 PF00144 Beta-lactamase D9C11_12325 PF00367 phosphotransferase system, EIIB D9C11_12325 PF02378 Phosphotransferase system, EIIC D9C11_12330 PF01418 Helix-turn-helix domain, rpiR family D9C11_12330 PF01380 SIS domain D9C11_12335 PF01380 SIS domain D9C11_12345 PF04463 Protein of unknown function (DUF523) D9C11_12375 PF04542 Sigma-70 region 2 D9C11_12375 PF08281 Sigma-70, region 4 D9C11_12380 PF13490 Putative zinc-finger D9C11_12385 PF02457 DisA bacterial checkpoint controller nucleotide-binding D9C11_12390 PF07949 YbbR-like protein D9C11_12395 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I D9C11_12395 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III D9C11_12395 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II D9C11_12395 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain D9C11_12405 PF01380 SIS domain D9C11_12415 PF00550 Phosphopantetheine attachment site D9C11_12415 PF08659 KR domain D9C11_12415 PF02801 Beta-ketoacyl synthase, C-terminal domain D9C11_12415 PF00109 Beta-ketoacyl synthase, N-terminal domain D9C11_12415 PF16197 Ketoacyl-synthetase C-terminal extension D9C11_12415 PF00668 Condensation domain D9C11_12415 PF13193 AMP-binding enzyme C-terminal domain D9C11_12415 PF14765 Polyketide synthase dehydratase D9C11_12415 PF00501 AMP-binding enzyme D9C11_12420 PF00550 Phosphopantetheine attachment site D9C11_12420 PF14765 Polyketide synthase dehydratase D9C11_12420 PF02801 Beta-ketoacyl synthase, C-terminal domain D9C11_12420 PF00109 Beta-ketoacyl synthase, N-terminal domain D9C11_12420 PF16197 Ketoacyl-synthetase C-terminal extension D9C11_12420 PF00698 Acyl transferase domain D9C11_12420 PF08659 KR domain D9C11_12430 PF00753 Metallo-beta-lactamase superfamily D9C11_12440 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus D9C11_12440 PF00361 Proton-conducting membrane transporter D9C11_12445 PF10070 Uncharacterized protein conserved in bacteria (DUF2309) D9C11_12460 PF10057 Uncharacterized conserved protein (DUF2294) D9C11_12480 PF00069 Protein kinase domain D9C11_12490 PF16226 Domain of unknown function (DUF4885) D9C11_12495 PF00324 Amino acid permease D9C11_12500 PF17334 Minor curli fiber component A D9C11_12505 PF17340 Family of unknown function (DUF5370) D9C11_12510 PF00905 Penicillin binding protein transpeptidase domain D9C11_12515 PF00067 Cytochrome P450 D9C11_12525 PF13520 Amino acid permease D9C11_12530 PF03009 Glycerophosphoryl diester phosphodiesterase family D9C11_12535 PF07690 Major Facilitator Superfamily D9C11_12545 PF10852 Protein of unknown function (DUF2651) D9C11_12555 PF07690 Major Facilitator Superfamily D9C11_12565 PF01471 Putative peptidoglycan binding domain D9C11_12565 PF08924 Domain of unknown function (DUF1906) D9C11_12575 PF12833 Helix-turn-helix domain D9C11_12575 PF02311 AraC-like ligand binding domain D9C11_12580 PF02222 ATP-grasp domain D9C11_12585 PF00089 Trypsin D9C11_12590 PF10794 Protein of unknown function (DUF2606) D9C11_12595 PF12697 Alpha/beta hydrolase family D9C11_12600 PF01066 CDP-alcohol phosphatidyltransferase D9C11_12605 PF09335 SNARE associated Golgi protein D9C11_12610 PF02666 Phosphatidylserine decarboxylase D9C11_12630 PF00375 Sodium:dicarboxylate symporter family D9C11_12640 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase D9C11_12650 PF07853 Protein of unknown function (DUF1648) D9C11_12655 PF01063 Amino-transferase class IV D9C11_12670 PF00324 Amino acid permease D9C11_12675 PF02574 Homocysteine S-methyltransferase D9C11_12685 PF01235 Sodium:alanine symporter family D9C11_12700 PF08664 YcbB domain D9C11_12700 PF00072 Response regulator receiver domain D9C11_12710 PF00701 Dihydrodipicolinate synthetase family D9C11_12715 PF00171 Aldehyde dehydrogenase family D9C11_12720 PF07690 Major Facilitator Superfamily D9C11_12725 PF13378 Enolase C-terminal domain-like D9C11_12730 PF07729 FCD domain D9C11_12730 PF00392 Bacterial regulatory proteins, gntR family D9C11_12735 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus D9C11_12735 PF08666 SAF domain D9C11_12745 PF15777 Tryptophan RNA-binding attenuator protein inhibitory protein D9C11_12750 PF00892 EamA-like transporter family D9C11_12755 PF00486 Transcriptional regulatory protein, C terminal D9C11_12755 PF00072 Response regulator receiver domain D9C11_12760 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D9C11_12760 PF00512 His Kinase A (phospho-acceptor) domain D9C11_12765 PF00005 ABC transporter D9C11_12780 PF10710 Protein of unknown function (DUF2512) D9C11_12785 PF07486 Cell Wall Hydrolase D9C11_12800 PF00872 Transposase, Mutator family D9C11_12835 PF16655 PhoD-like phosphatase, N-terminal domain D9C11_12835 PF09423 PhoD-like phosphatase D9C11_12840 PF02416 mttA/Hcf106 family D9C11_12845 PF00902 Sec-independent protein translocase protein (TatC) D9C11_12850 PF01470 Pyroglutamyl peptidase D9C11_12855 PF00266 Aminotransferase class-V D9C11_12860 PF07690 Major Facilitator Superfamily D9C11_12865 PF00440 Bacterial regulatory proteins, tetR family D9C11_12870 PF00710 Asparaginase, N-terminal D9C11_12870 PF17763 Glutaminase/Asparaginase C-terminal domain D9C11_12875 PF01674 Lipase (class 2) D9C11_12880 PF06271 RDD family D9C11_12885 PF05225 helix-turn-helix, Psq domain D9C11_12885 PF02810 SEC-C motif D9C11_12890 PF14501 GHKL domain D9C11_12895 PF04397 LytTr DNA-binding domain D9C11_12895 PF00072 Response regulator receiver domain D9C11_12900 PF00005 ABC transporter D9C11_12905 PF12679 ABC-2 family transporter protein D9C11_12910 PF00248 Aldo/keto reductase family D9C11_12915 PF11611 Domain of unknown function (DUF4352) D9C11_12915 PF17118 Domain of unknown function (DUF5105) D9C11_12925 PF16244 Domain of unknown function (DUF4901) D9C11_12930 PF16244 Domain of unknown function (DUF4901) D9C11_12935 PF13539 D-alanyl-D-alanine carboxypeptidase D9C11_12940 PF18801 response regulator aspartate phosphatase H, N terminal D9C11_12955 PF01297 Zinc-uptake complex component A periplasmic D9C11_12960 PF00005 ABC transporter D9C11_12965 PF00950 ABC 3 transport family D9C11_12970 PF00296 Luciferase-like monooxygenase D9C11_12975 PF01609 Transposase DDE domain D9C11_12980 PF02342 TerD domain D9C11_12985 PF02342 TerD domain D9C11_12990 PF02342 TerD domain D9C11_12995 PF03741 Integral membrane protein TerC family D9C11_13000 PF14266 Putative component of 'biosynthetic module' D9C11_13005 PF05816 Toxic anion resistance protein (TelA) D9C11_13010 PF07690 Major Facilitator Superfamily D9C11_13020 PF07690 Major Facilitator Superfamily D9C11_13030 PF00005 ABC transporter D9C11_13030 PF00571 CBS domain D9C11_13035 PF00528 Binding-protein-dependent transport system inner membrane component D9C11_13040 PF04069 Substrate binding domain of ABC-type glycine betaine transport system D9C11_13045 PF07687 Peptidase dimerisation domain D9C11_13045 PF01546 Peptidase family M20/M25/M40 D9C11_13050 PF03606 C4-dicarboxylate anaerobic carrier D9C11_13065 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain D9C11_13065 PF00056 lactate/malate dehydrogenase, NAD binding domain D9C11_13080 PF08892 YqcI/YcgG family D9C11_13095 PF02540 NAD synthase D9C11_13105 PF01202 Shikimate kinase D9C11_13110 PF08241 Methyltransferase domain D9C11_13115 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D9C11_13115 PF03466 LysR substrate binding domain D9C11_13120 PF05448 Acetyl xylan esterase (AXE1) D9C11_13130 PF10127 RNA repair pathway DNA polymerase beta family D9C11_13135 PF01619 Proline dehydrogenase D9C11_13140 PF00171 Aldehyde dehydrogenase family D9C11_13145 PF00474 Sodium:solute symporter family D9C11_13150 PF13556 PucR C-terminal helix-turn-helix domain D9C11_13150 PF17853 GGDEF-like domain D9C11_13155 PF09323 Domain of unknown function (DUF1980) D9C11_13160 PF03773 Predicted permease D9C11_13165 PF00561 alpha/beta hydrolase fold D9C11_13170 PF07992 Pyridine nucleotide-disulphide oxidoreductase D9C11_13175 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases D9C11_13180 PF00355 Rieske [2Fe-2S] domain D9C11_13185 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain D9C11_13185 PF01077 Nitrite and sulphite reductase 4Fe-4S domain D9C11_13185 PF07992 Pyridine nucleotide-disulphide oxidoreductase D9C11_13185 PF04324 BFD-like [2Fe-2S] binding domain D9C11_13185 PF18267 Rubredoxin NAD+ reductase C-terminal domain D9C11_13190 PF01568 Molydopterin dinucleotide binding domain D9C11_13190 PF00384 Molybdopterin oxidoreductase D9C11_13190 PF04879 Molybdopterin oxidoreductase Fe4S4 domain D9C11_13195 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain D9C11_13195 PF18267 Rubredoxin NAD+ reductase C-terminal domain D9C11_13195 PF07992 Pyridine nucleotide-disulphide oxidoreductase D9C11_13195 PF04324 BFD-like [2Fe-2S] binding domain D9C11_13200 PF07690 Major Facilitator Superfamily D9C11_13210 PF03734 L,D-transpeptidase catalytic domain D9C11_13225 PF00528 Binding-protein-dependent transport system inner membrane component D9C11_13230 PF00497 Bacterial extracellular solute-binding proteins, family 3 D9C11_13240 PF06271 RDD family D9C11_13245 PF10925 Protein of unknown function (DUF2680) D9C11_13250 PF01047 MarR family D9C11_13265 PF00232 Glycosyl hydrolase family 1 D9C11_13270 PF11033 Competence protein J (ComJ) D9C11_13275 PF14040 Deoxyribonuclease NucA/NucB D9C11_13285 PF01380 SIS domain D9C11_13290 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family D9C11_13295 PF01638 HxlR-like helix-turn-helix D9C11_13300 PF00501 AMP-binding enzyme D9C11_13300 PF00668 Condensation domain D9C11_13300 PF00550 Phosphopantetheine attachment site D9C11_13300 PF13193 AMP-binding enzyme C-terminal domain D9C11_13305 PF00550 Phosphopantetheine attachment site D9C11_13305 PF00501 AMP-binding enzyme D9C11_13305 PF13193 AMP-binding enzyme C-terminal domain D9C11_13305 PF00668 Condensation domain D9C11_13310 PF00975 Thioesterase domain D9C11_13310 PF00550 Phosphopantetheine attachment site D9C11_13310 PF00668 Condensation domain D9C11_13310 PF13193 AMP-binding enzyme C-terminal domain D9C11_13310 PF00501 AMP-binding enzyme D9C11_13315 PF00975 Thioesterase domain D9C11_13325 PF14317 YcxB-like protein D9C11_13330 PF00892 EamA-like transporter family D9C11_13340 PF00155 Aminotransferase class I and II D9C11_13340 PF00392 Bacterial regulatory proteins, gntR family D9C11_13345 PF01648 4'-phosphopantetheinyl transferase superfamily D9C11_13355 PF00005 ABC transporter D9C11_13360 PF00528 Binding-protein-dependent transport system inner membrane component D9C11_13365 PF00497 Bacterial extracellular solute-binding proteins, family 3 D9C11_13370 PF03466 LysR substrate binding domain D9C11_13370 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D9C11_13380 PF00561 alpha/beta hydrolase fold D9C11_13385 PF00854 POT family D9C11_13390 PF12708 Pectate lyase superfamily protein D9C11_13390 PF13229 Right handed beta helix region D9C11_13400 PF03323 Bacillus/Clostridium GerA spore germination protein D9C11_13405 PF05504 Spore germination B3/ GerAC like, C-terminal D9C11_13410 PF03845 Spore germination protein D9C11_13415 PF00005 ABC transporter D9C11_13420 PF02687 FtsX-like permease family D9C11_13420 PF12704 MacB-like periplasmic core domain D9C11_13425 PF00072 Response regulator receiver domain D9C11_13425 PF00486 Transcriptional regulatory protein, C terminal D9C11_13430 PF00512 His Kinase A (phospho-acceptor) domain D9C11_13430 PF00672 HAMP domain D9C11_13430 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D9C11_13435 PF18801 response regulator aspartate phosphatase H, N terminal D9C11_13440 PF11131 Rap-phr extracellular signalling D9C11_13445 PF09680 Family of unknown function D9C11_13450 PF09680 Family of unknown function D9C11_13455 PF13840 ACT domain D9C11_13455 PF00696 Amino acid kinase family D9C11_13460 PF01032 FecCD transport family D9C11_13465 PF01032 FecCD transport family D9C11_13470 PF00005 ABC transporter D9C11_13475 PF01497 Periplasmic binding protein D9C11_13480 PF07690 Major Facilitator Superfamily D9C11_13485 PF00440 Bacterial regulatory proteins, tetR family D9C11_13490 PF00881 Nitroreductase family D9C11_13495 PF03992 Antibiotic biosynthesis monooxygenase D9C11_13500 PF01022 Bacterial regulatory protein, arsR family D9C11_13505 PF00155 Aminotransferase class I and II D9C11_13505 PF00392 Bacterial regulatory proteins, gntR family D9C11_13510 PF00202 Aminotransferase class-III D9C11_13515 PF00171 Aldehyde dehydrogenase family D9C11_13520 PF06800 Sugar transport protein D9C11_13530 PF07987 Domain of unkown function (DUF1775) D9C11_13535 PF04234 CopC domain D9C11_13535 PF05425 Copper resistance protein D D9C11_13535 PF13115 YtkA-like D9C11_13540 PF08220 DeoR-like helix-turn-helix domain D9C11_13540 PF05573 NosL D9C11_13550 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit D9C11_13550 PF02378 Phosphotransferase system, EIIC D9C11_13555 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 D9C11_13560 PF08125 Mannitol dehydrogenase C-terminal domain D9C11_13560 PF01232 Mannitol dehydrogenase Rossmann domain D9C11_13565 PF00180 Isocitrate/isopropylmalate dehydrogenase D9C11_13570 PF10502 Signal peptidase, peptidase S26 D9C11_13580 PF07977 FabA-like domain D9C11_13600 PF03746 LamB/YcsF family D9C11_13605 PF01566 Natural resistance-associated macrophage protein D9C11_13610 PF07286 Protein of unknown function (DUF1445) D9C11_13615 PF02682 Carboxyltransferase domain, subdomain C and D D9C11_13620 PF02626 Carboxyltransferase domain, subdomain A and B D9C11_13625 PF01614 Bacterial transcriptional regulator D9C11_13625 PF09339 IclR helix-turn-helix domain D9C11_13630 PF13472 GDSL-like Lipase/Acylhydrolase family D9C11_13635 PF13129 Protein of unknown function (DUF3953) D9C11_13640 PF03992 Antibiotic biosynthesis monooxygenase D9C11_13645 PF00905 Penicillin binding protein transpeptidase domain D9C11_13645 PF03717 Penicillin-binding Protein dimerisation domain D9C11_13645 PF05223 NTF2-like N-terminal transpeptidase domain D9C11_13650 PF00248 Aldo/keto reductase family D9C11_13655 PF08279 HTH domain D9C11_13655 PF05043 Mga helix-turn-helix domain D9C11_13655 PF00874 PRD domain D9C11_13655 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 D9C11_13655 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit D9C11_13660 PF13193 AMP-binding enzyme C-terminal domain D9C11_13660 PF00501 AMP-binding enzyme D9C11_13665 PF13649 Methyltransferase domain D9C11_13680 PF13302 Acetyltransferase (GNAT) domain D9C11_13685 PF16242 Pyridoxamine 5'-phosphate oxidase like D9C11_13690 PF10997 Alternate to MurJ D9C11_13695 PF12823 Domain of unknown function (DUF3817) D9C11_13700 PF01037 Lrp/AsnC ligand binding domain D9C11_13705 PF01131 DNA topoisomerase D9C11_13705 PF01751 Toprim domain D9C11_13710 PF00293 NUDIX domain D9C11_13745 PF01566 Natural resistance-associated macrophage protein D9C11_13750 PF04226 Transglycosylase associated protein D9C11_13755 PF09954 Uncharacterized protein conserved in bacteria (DUF2188) D9C11_13760 PF12787 EcsC protein family D9C11_13770 PF07883 Cupin domain D9C11_13775 PF16291 Domain of unknown function (DUF4937 D9C11_13785 PF03480 Bacterial extracellular solute-binding protein, family 7 D9C11_13790 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D9C11_13790 PF17203 Single cache domain 3 D9C11_13790 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain D9C11_13795 PF00072 Response regulator receiver domain D9C11_13795 PF08279 HTH domain D9C11_13800 PF00375 Sodium:dicarboxylate symporter family D9C11_13810 PF01594 AI-2E family transporter D9C11_13815 PF00005 ABC transporter D9C11_13830 PF02770 Acyl-CoA dehydrogenase, middle domain D9C11_13830 PF02771 Acyl-CoA dehydrogenase, N-terminal domain D9C11_13830 PF08028 Acyl-CoA dehydrogenase, C-terminal domain D9C11_13840 PF13040 Fur-regulated basic protein B D9C11_13850 PF16916 Dimerisation domain of Zinc Transporter D9C11_13850 PF01545 Cation efflux family D9C11_13855 PF00085 Thioredoxin D9C11_13860 PF01820 D-ala D-ala ligase N-terminus D9C11_13860 PF07478 D-ala D-ala ligase C-terminus D9C11_13865 PF01225 Mur ligase family, catalytic domain D9C11_13865 PF02875 Mur ligase family, glutamate ligase domain D9C11_13865 PF08245 Mur ligase middle domain D9C11_13875 PF00271 Helicase conserved C-terminal domain D9C11_13875 PF00270 DEAD/DEAH box helicase D9C11_13880 PF03703 Bacterial PH domain D9C11_13885 PF03703 Bacterial PH domain D9C11_13890 PF01694 Rhomboid family D9C11_13895 PF01648 4'-phosphopantetheinyl transferase superfamily D9C11_13905 PF00842 Alanine racemase, C-terminal domain D9C11_13905 PF01168 Alanine racemase, N-terminal domain D9C11_13910 PF01402 Ribbon-helix-helix protein, copG family D9C11_13915 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system D9C11_13920 PF01740 STAS domain D9C11_13920 PF08678 Rsbr N terminal D9C11_13925 PF01740 STAS domain D9C11_13930 PF13581 Histidine kinase-like ATPase domain D9C11_13935 PF08673 Phosphoserine phosphatase RsbU, N-terminal domain D9C11_13935 PF07228 Stage II sporulation protein E (SpoIIE) D9C11_13940 PF01740 STAS domain D9C11_13945 PF13581 Histidine kinase-like ATPase domain D9C11_13950 PF04542 Sigma-70 region 2 D9C11_13950 PF04539 Sigma-70 region 3 D9C11_13950 PF04545 Sigma-70, region 4 D9C11_13955 PF07228 Stage II sporulation protein E (SpoIIE) D9C11_13965 PF17674 HHH domain D9C11_13965 PF00575 S1 RNA binding domain D9C11_13965 PF16921 Tex protein YqgF-like domain D9C11_13965 PF09371 Tex-like protein N-terminal domain D9C11_13975 PF10263 SprT-like family D9C11_13975 PF17283 SprT-like zinc ribbon domain D9C11_14015 PF13302 Acetyltransferase (GNAT) domain D9C11_14040 PF16302 Domain of unknown function (DUF4944) D9C11_14050 PF01695 IstB-like ATP binding protein D9C11_14055 PF00665 Integrase core domain D9C11_14065 PF01381 Helix-turn-helix D9C11_14100 PF00313 'Cold-shock' DNA-binding domain D9C11_14115 PF00665 Integrase core domain D9C11_14120 PF01695 IstB-like ATP binding protein D9C11_14130 PF02559 CarD-like/TRCF domain D9C11_14145 PF02311 AraC-like ligand binding domain D9C11_14145 PF12833 Helix-turn-helix domain D9C11_14150 PF00892 EamA-like transporter family D9C11_14160 PF06445 GyrI-like small molecule binding domain D9C11_14160 PF12833 Helix-turn-helix domain D9C11_14165 PF00392 Bacterial regulatory proteins, gntR family D9C11_14165 PF00155 Aminotransferase class I and II D9C11_14190 PF00381 PTS HPr component phosphorylation site D9C11_14195 PF00440 Bacterial regulatory proteins, tetR family D9C11_14200 PF00892 EamA-like transporter family D9C11_14205 PF00392 Bacterial regulatory proteins, gntR family D9C11_14205 PF00155 Aminotransferase class I and II D9C11_14210 PF01575 MaoC like domain D9C11_14215 PF06821 Serine hydrolase D9C11_14225 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) D9C11_14225 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 D9C11_14230 PF01022 Bacterial regulatory protein, arsR family D9C11_14240 PF01451 Low molecular weight phosphotyrosine protein phosphatase D9C11_14245 PF12746 GNAT acetyltransferase D9C11_14260 PF00155 Aminotransferase class I and II D9C11_14260 PF00392 Bacterial regulatory proteins, gntR family D9C11_14265 PF01613 Flavin reductase like domain D9C11_14275 PF02627 Carboxymuconolactone decarboxylase family D9C11_14290 PF07730 Histidine kinase D9C11_14290 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D9C11_14305 PF03176 MMPL family D9C11_14315 PF04474 Protein of unknown function (DUF554) D9C11_14320 PF06445 GyrI-like small molecule binding domain D9C11_14320 PF13411 MerR HTH family regulatory protein D9C11_14325 PF16916 Dimerisation domain of Zinc Transporter D9C11_14325 PF01545 Cation efflux family D9C11_14330 PF00881 Nitroreductase family D9C11_14335 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily D9C11_14340 PF07681 DoxX D9C11_14345 PF00085 Thioredoxin D9C11_14360 PF10676 Spore germination protein gerPA/gerPF D9C11_14365 PF10676 Spore germination protein gerPA/gerPF D9C11_14380 PF00011 Hsp20/alpha crystallin family D9C11_14385 PF10676 Spore germination protein gerPA/gerPF D9C11_14390 PF10676 Spore germination protein gerPA/gerPF D9C11_14395 PF00440 Bacterial regulatory proteins, tetR family D9C11_14400 PF13564 DoxX-like family D9C11_14405 PF00583 Acetyltransferase (GNAT) family D9C11_14415 PF00324 Amino acid permease D9C11_14420 PF05163 DinB family D9C11_14425 PF01047 MarR family D9C11_14430 PF03176 MMPL family D9C11_14435 PF00881 Nitroreductase family D9C11_14440 PF01047 MarR family D9C11_14445 PF07690 Major Facilitator Superfamily D9C11_14455 PF01925 Sulfite exporter TauE/SafE D9C11_14460 PF00392 Bacterial regulatory proteins, gntR family D9C11_14460 PF07729 FCD domain D9C11_14465 PF00704 Glycosyl hydrolases family 18 D9C11_14465 PF01476 LysM domain D9C11_14470 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase D9C11_14475 PF11611 Domain of unknown function (DUF4352) D9C11_14475 PF08139 Prokaryotic membrane lipoprotein lipid attachment site D9C11_14480 PF00245 Alkaline phosphatase D9C11_14485 PF08818 Domain of unknown function (DU1801) D9C11_14490 PF16302 Domain of unknown function (DUF4944) D9C11_14495 PF00583 Acetyltransferase (GNAT) family D9C11_14500 PF01966 HD domain D9C11_14505 PF07563 Protein of unknown function (DUF1541) D9C11_14510 PF07690 Major Facilitator Superfamily D9C11_14515 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit D9C11_14530 PF00232 Glycosyl hydrolase family 1 D9C11_14535 PF07702 UTRA domain D9C11_14535 PF00392 Bacterial regulatory proteins, gntR family D9C11_14540 PF00480 ROK family D9C11_14550 PF02156 Glycosyl hydrolase family 26 D9C11_14595 PF00586 AIR synthase related protein, N-terminal domain D9C11_14595 PF02769 AIR synthase related protein, C-terminal domain D9C11_14600 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE D9C11_14605 PF00814 Glycoprotease family D9C11_14610 PF00583 Acetyltransferase (GNAT) family D9C11_14615 PF00814 Glycoprotease family D9C11_14620 PF12848 ABC transporter D9C11_14620 PF16326 ABC transporter C-terminal domain D9C11_14620 PF00005 ABC transporter D9C11_14625 PF01967 MoaC family D9C11_14630 PF02629 CoA binding domain D9C11_14630 PF06971 Putative DNA-binding protein N-terminus D9C11_14635 PF02416 mttA/Hcf106 family D9C11_14640 PF00902 Sec-independent protein translocase protein (TatC) D9C11_14650 PF14146 Domain of unknown function (DUF4305) D9C11_14655 PF02517 CPBP intramembrane metalloprotease D9C11_14660 PF00166 Chaperonin 10 Kd subunit D9C11_14665 PF00118 TCP-1/cpn60 chaperonin family D9C11_14670 PF00072 Response regulator receiver domain D9C11_14670 PF00486 Transcriptional regulatory protein, C terminal D9C11_14685 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain D9C11_14685 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D9C11_14685 PF17203 Single cache domain 3 D9C11_14710 PF05147 Lanthionine synthetase C-like protein D9C11_14710 PF13575 Domain of unknown function (DUF4135) D9C11_14715 PF00664 ABC transporter transmembrane region D9C11_14715 PF00005 ABC transporter D9C11_14715 PF03412 Peptidase C39 family D9C11_14725 PF00005 ABC transporter D9C11_14745 PF00005 ABC transporter D9C11_14760 PF00082 Subtilase family D9C11_14765 PF00931 NB-ARC domain D9C11_14765 PF13176 Tetratricopeptide repeat D9C11_14770 PF08240 Alcohol dehydrogenase GroES-like domain D9C11_14770 PF00107 Zinc-binding dehydrogenase D9C11_14780 PF00294 pfkB family carbohydrate kinase D9C11_14790 PF08271 TFIIB zinc-binding D9C11_14800 PF13421 SPFH domain-Band 7 family D9C11_14805 PF07885 Ion channel D9C11_14810 PF00083 Sugar (and other) transporter D9C11_14820 PF00107 Zinc-binding dehydrogenase D9C11_14820 PF08240 Alcohol dehydrogenase GroES-like domain D9C11_14825 PF03330 Lytic transglycolase D9C11_14830 PF07676 WD40-like Beta Propeller Repeat D9C11_14840 PF14169 Cold-inducible protein YdjO D9C11_14845 PF12697 Alpha/beta hydrolase family D9C11_14855 PF00394 Multicopper oxidase D9C11_14855 PF07731 Multicopper oxidase D9C11_14855 PF07732 Multicopper oxidase D9C11_14870 PF16916 Dimerisation domain of Zinc Transporter D9C11_14870 PF01545 Cation efflux family D9C11_14875 PF07726 ATPase family associated with various cellular activities (AAA) D9C11_14875 PF17863 AAA lid domain D9C11_14880 PF01882 Protein of unknown function DUF58 D9C11_14885 PF13559 Domain of unknown function (DUF4129) D9C11_14885 PF01841 Transglutaminase-like superfamily D9C11_14885 PF11992 Domain of unknown function (DUF3488) D9C11_14890 PF02540 NAD synthase D9C11_14890 PF00958 GMP synthase C terminal domain D9C11_14890 PF00117 Glutamine amidotransferase class-I D9C11_14895 PF00145 C-5 cytosine-specific DNA methylase D9C11_14915 PF09397 Ftsk gamma domain D9C11_14915 PF17854 FtsK alpha domain D9C11_14915 PF01580 FtsK/SpoIIIE family D9C11_14925 PF02486 Replication initiation factor D9C11_14950 PF00860 Permease family D9C11_14965 PF13076 Fur-regulated basic protein A D9C11_14970 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) D9C11_14975 PF14044 NETI protein D9C11_14980 PF00731 AIR carboxylase D9C11_14985 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain D9C11_14985 PF02222 ATP-grasp domain D9C11_14990 PF00206 Lyase D9C11_14990 PF10397 Adenylosuccinate lyase C-terminus D9C11_14995 PF01259 SAICAR synthetase D9C11_15000 PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase D9C11_15010 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain D9C11_15010 PF02769 AIR synthase related protein, C-terminal domain D9C11_15010 PF00586 AIR synthase related protein, N-terminal domain D9C11_15015 PF00156 Phosphoribosyl transferase domain D9C11_15020 PF02769 AIR synthase related protein, C-terminal domain D9C11_15020 PF00586 AIR synthase related protein, N-terminal domain D9C11_15025 PF00551 Formyl transferase D9C11_15030 PF02142 MGS-like domain D9C11_15030 PF01808 AICARFT/IMPCHase bienzyme D9C11_15035 PF02844 Phosphoribosylglycinamide synthetase, N domain D9C11_15035 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain D9C11_15035 PF02843 Phosphoribosylglycinamide synthetase, C domain D9C11_15040 PF01037 Lrp/AsnC ligand binding domain D9C11_15045 PF13520 Amino acid permease D9C11_15050 PF11127 Protein of unknown function (DUF2892) D9C11_15055 PF01979 Amidohydrolase family D9C11_15055 PF13382 Adenine deaminase C-terminal domain D9C11_15060 PF17479 Protein of unknown function (DUF3048) C-terminal domain D9C11_15060 PF11258 Protein of unknown function (DUF3048) N-terminal domain D9C11_15065 PF01371 Trp repressor protein D9C11_15075 PF01884 PcrB family D9C11_15080 PF00580 UvrD/REP helicase N-terminal domain D9C11_15080 PF13361 UvrD-like helicase C-terminal domain D9C11_15085 PF03119 NAD-dependent DNA ligase C4 zinc finger domain D9C11_15085 PF12826 Helix-hairpin-helix motif D9C11_15085 PF00533 BRCA1 C Terminus (BRCT) domain D9C11_15085 PF01653 NAD-dependent DNA ligase adenylation domain D9C11_15085 PF03120 NAD-dependent DNA ligase OB-fold domain D9C11_15090 PF07537 CamS sex pheromone cAM373 precursor D9C11_15095 PF01636 Phosphotransferase enzyme family D9C11_15100 PF02308 MgtC family D9C11_15105 PF00474 Sodium:solute symporter family D9C11_15110 PF02686 Glu-tRNAGln amidotransferase C subunit D9C11_15115 PF01425 Amidase D9C11_15120 PF02637 GatB domain D9C11_15120 PF02934 GatB/GatE catalytic domain D9C11_15125 PF00440 Bacterial regulatory proteins, tetR family D9C11_15130 PF00873 AcrB/AcrD/AcrF family D9C11_15135 PF00781 Diacylglycerol kinase catalytic domain D9C11_15140 PF05958 tRNA (Uracil-5-)-methyltransferase D9C11_15140 PF01938 TRAM domain D9C11_15145 PF00145 C-5 cytosine-specific DNA methylase D9C11_15150 PF09208 Restriction endonuclease MspI D9C11_15200 PF04634 Protein of unknown function, DUF600 D9C11_15205 PF04740 LXG domain of WXG superfamily D9C11_15215 PF13176 Tetratricopeptide repeat D9C11_15215 PF18801 response regulator aspartate phosphatase H, N terminal D9C11_15225 PF01709 Transcriptional regulator D9C11_15235 PF00440 Bacterial regulatory proteins, tetR family D9C11_15240 PF11007 Spore coat associated protein JA (CotJA) D9C11_15245 PF12652 CotJB protein D9C11_15250 PF05067 Manganese containing catalase D9C11_15255 PF00583 Acetyltransferase (GNAT) family D9C11_15265 PF04854 Protein of unknown function, DUF624 D9C11_15270 PF06580 Histidine kinase D9C11_15270 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D9C11_15270 PF00672 HAMP domain D9C11_15270 PF02743 Cache domain D9C11_15280 PF13416 Bacterial extracellular solute-binding protein D9C11_15285 PF00528 Binding-protein-dependent transport system inner membrane component D9C11_15300 PF18370 Rhamnogalacturonan I lyases beta-sheet domain D9C11_15300 PF01839 FG-GAP repeat D9C11_15305 PF00657 GDSL-like Lipase/Acylhydrolase D9C11_15310 PF08533 Beta-galactosidase C-terminal domain D9C11_15310 PF02449 Beta-galactosidase D9C11_15310 PF08532 Beta-galactosidase trimerisation domain D9C11_15320 PF01547 Bacterial extracellular solute-binding protein D9C11_15330 PF00528 Binding-protein-dependent transport system inner membrane component D9C11_15340 PF04239 Protein of unknown function (DUF421) D9C11_15350 PF03992 Antibiotic biosynthesis monooxygenase D9C11_15365 PF01740 STAS domain D9C11_15370 PF10055 Uncharacterized small protein (DUF2292) D9C11_15375 PF01027 Inhibitor of apoptosis-promoting Bax1 D9C11_15380 PF00892 EamA-like transporter family D9C11_15385 PF01047 MarR family D9C11_15400 PF13037 Domain of unknown function (DUF3898) D9C11_15400 PF13039 Protein of unknown function (DUF3900) D9C11_15405 PF00067 Cytochrome P450 D9C11_15405 PF00175 Oxidoreductase NAD-binding domain D9C11_15405 PF00258 Flavodoxin D9C11_15405 PF00667 FAD binding domain D9C11_15410 PF00884 Sulfatase D9C11_15415 PF00483 Nucleotidyl transferase D9C11_15420 PF16363 GDP-mannose 4,6 dehydratase D9C11_15430 PF00535 Glycosyl transferase family 2 D9C11_15435 PF03407 Nucleotide-diphospho-sugar transferase D9C11_15440 PF07690 Major Facilitator Superfamily D9C11_15445 PF13419 Haloacid dehalogenase-like hydrolase D9C11_15450 PF13520 Amino acid permease D9C11_15455 PF00171 Aldehyde dehydrogenase family D9C11_15460 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain D9C11_15465 PF00005 ABC transporter D9C11_15465 PF12848 ABC transporter D9C11_15465 PF16326 ABC transporter C-terminal domain D9C11_15470 PF10787 Uncharacterised protein from bacillus cereus group D9C11_15475 PF13411 MerR HTH family regulatory protein D9C11_15480 PF07690 Major Facilitator Superfamily D9C11_15495 PF12848 ABC transporter D9C11_15495 PF00005 ABC transporter D9C11_15500 PF00271 Helicase conserved C-terminal domain D9C11_15500 PF00270 DEAD/DEAH box helicase D9C11_15510 PF00544 Pectate lyase D9C11_15515 PF00939 Sodium:sulfate symporter transmembrane region D9C11_15520 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D9C11_15520 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain D9C11_15525 PF12431 Transcriptional regulator D9C11_15525 PF08279 HTH domain D9C11_15525 PF00072 Response regulator receiver domain D9C11_15530 PF03401 Tripartite tricarboxylate transporter family receptor D9C11_15535 PF03600 Citrate transporter D9C11_15540 PF00753 Metallo-beta-lactamase superfamily D9C11_15545 PF02898 Nitric oxide synthase, oxygenase domain D9C11_15550 PF00708 Acylphosphatase D9C11_15560 PF11121 Protein of unknown function (DUF2639) D9C11_15570 PF11588 Protein of unknown function (DUF3243) D9C11_15575 PF00557 Metallopeptidase family M24 D9C11_15580 PF00367 phosphotransferase system, EIIB D9C11_15580 PF02378 Phosphotransferase system, EIIC D9C11_15585 PF00884 Sulfatase D9C11_15595 PF09350 Domain of unknown function (DUF1992) D9C11_15610 PF00367 phosphotransferase system, EIIB D9C11_15610 PF02378 Phosphotransferase system, EIIC D9C11_15610 PF00367 phosphotransferase system, EIIB D9C11_15610 PF02378 Phosphotransferase system, EIIC D9C11_15615 PF00128 Alpha amylase, catalytic domain D9C11_15615 PF16657 Maltogenic Amylase, C-terminal domain D9C11_15620 PF00392 Bacterial regulatory proteins, gntR family D9C11_15620 PF07702 UTRA domain D9C11_15625 PF00881 Nitroreductase family D9C11_15630 PF00149 Calcineurin-like phosphoesterase D9C11_15630 PF02872 5'-nucleotidase, C-terminal domain D9C11_15635 PF01965 DJ-1/PfpI family D9C11_15640 PF07690 Major Facilitator Superfamily D9C11_15645 PF06569 Protein of unknown function (DUF1128) D9C11_15650 PF01451 Low molecular weight phosphotyrosine protein phosphatase D9C11_15660 PF03631 Virulence factor BrkB D9C11_15670 PF07690 Major Facilitator Superfamily D9C11_15675 PF01699 Sodium/calcium exchanger protein D9C11_15680 PF14167 YfkD-like protein D9C11_15685 PF00924 Mechanosensitive ion channel D9C11_15690 PF08756 YfkB-like domain D9C11_15690 PF04055 Radical SAM superfamily D9C11_15700 PF01522 Polysaccharide deacetylase D9C11_15705 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase D9C11_15705 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase D9C11_15710 PF01544 CorA-like Mg2+ transporter protein D9C11_15715 PF00730 HhH-GPD superfamily base excision DNA repair protein D9C11_15720 PF01938 TRAM domain D9C11_15720 PF05958 tRNA (Uracil-5-)-methyltransferase D9C11_15750 PF13732 Domain of unknown function (DUF4162) D9C11_15750 PF00005 ABC transporter D9C11_15760 PF00005 ABC transporter D9C11_15765 PF12679 ABC-2 family transporter protein D9C11_15775 PF01207 Dihydrouridine synthase (Dus) D9C11_15790 PF00676 Dehydrogenase E1 component D9C11_15795 PF02780 Transketolase, C-terminal domain D9C11_15795 PF02779 Transketolase, pyrimidine binding domain D9C11_15800 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) D9C11_15800 PF00364 Biotin-requiring enzyme D9C11_15800 PF02817 e3 binding domain D9C11_15805 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain D9C11_15805 PF07992 Pyridine nucleotide-disulphide oxidoreductase D9C11_15810 PF00158 Sigma-54 interaction domain D9C11_15810 PF01590 GAF domain D9C11_15810 PF02954 Bacterial regulatory protein, Fis family D9C11_15815 PF08141 Small acid-soluble spore protein H family D9C11_15820 PF02694 Uncharacterised BCR, YnfA/UPF0060 family D9C11_15825 PF17353 Family of unknown function (DUF5381) D9C11_15840 PF06013 Proteins of 100 residues with WXG D9C11_15845 PF02056 Family 4 glycosyl hydrolase D9C11_15845 PF11975 Family 4 glycosyl hydrolase C-terminal domain D9C11_15850 PF01380 SIS domain D9C11_15850 PF01418 Helix-turn-helix domain, rpiR family D9C11_15855 PF00367 phosphotransferase system, EIIB D9C11_15855 PF02378 Phosphotransferase system, EIIC D9C11_15860 PF00664 ABC transporter transmembrane region D9C11_15860 PF00005 ABC transporter D9C11_15865 PF00664 ABC transporter transmembrane region D9C11_15865 PF00005 ABC transporter D9C11_15870 PF07681 DoxX D9C11_15875 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily D9C11_15880 PF07730 Histidine kinase D9C11_15885 PF00072 Response regulator receiver domain D9C11_15885 PF00196 Bacterial regulatory proteins, luxR family D9C11_15890 PF00005 ABC transporter D9C11_15910 PF10400 Virulence activator alpha C-term D9C11_15910 PF03551 Transcriptional regulator PadR-like family D9C11_15915 PF01674 Lipase (class 2) D9C11_15920 PF01757 Acyltransferase family D9C11_15925 PF00440 Bacterial regulatory proteins, tetR family D9C11_15925 PF17922 Tetracyclin repressor-like, C-terminal domain D9C11_15930 PF07690 Major Facilitator Superfamily D9C11_15935 PF12867 DinB superfamily D9C11_15940 PF07690 Major Facilitator Superfamily D9C11_15945 PF01047 MarR family D9C11_15950 PF09924 Uncharacterised conserved protein (DUF2156) D9C11_15950 PF03706 Lysylphosphatidylglycerol synthase TM region D9C11_15955 PF01497 Periplasmic binding protein D9C11_15960 PF01032 FecCD transport family D9C11_15965 PF01032 FecCD transport family D9C11_15970 PF02567 Phenazine biosynthesis-like protein D9C11_15975 PF00881 Nitroreductase family D9C11_15980 PF14151 YfhD-like protein D9C11_15985 PF14152 YfhE-like protein D9C11_15990 PF01370 NAD dependent epimerase/dehydratase family D9C11_15990 PF08338 Domain of unknown function (DUF1731) D9C11_15995 PF02631 RecX family D9C11_16000 PF08838 Protein of unknown function (DUF1811) D9C11_16005 PF07690 Major Facilitator Superfamily D9C11_16010 PF08176 Small acid-soluble spore protein K family D9C11_16015 PF14043 WVELL protein D9C11_16020 PF08239 Bacterial SH3 domain D9C11_16025 PF13630 SdpI/YhfL protein family D9C11_16030 PF00561 alpha/beta hydrolase fold D9C11_16035 PF00535 Glycosyl transferase family 2 D9C11_16040 PF09586 Bacterial membrane protein YfhO D9C11_16045 PF04307 LexA-binding, inner membrane-associated putative hydrolase D9C11_16050 PF14815 NUDIX domain D9C11_16050 PF00730 HhH-GPD superfamily base excision DNA repair protein D9C11_16065 PF04259 Small, acid-soluble spore protein, gamma-type D9C11_16070 PF14182 YgaB-like protein D9C11_16075 PF04167 Protein of unknown function (DUF402) D9C11_16080 PF00664 ABC transporter transmembrane region D9C11_16080 PF00005 ABC transporter D9C11_16085 PF06081 Aromatic acid exporter family member 1 D9C11_16090 PF00202 Aminotransferase class-III D9C11_16095 PF00578 AhpC/TSA family D9C11_16100 PF01475 Ferric uptake regulator family D9C11_16105 PF11023 Zinc-ribbon containing domain D9C11_16110 PF14540 Nucleotidyltransferase-like D9C11_16110 PF18576 Helix-turn-helix domain D9C11_16215 PF07070 SpoOM protein D9C11_16225 PF07875 Coat F domain D9C11_16230 PF03575 Peptidase family S51 D9C11_16235 PF13667 ThiC-associated domain D9C11_16235 PF01964 Radical SAM ThiC family D9C11_16245 PF13040 Fur-regulated basic protein B D9C11_16250 PF06628 Catalase-related immune-responsive D9C11_16250 PF00199 Catalase D9C11_16255 PF00005 ABC transporter D9C11_16260 PF09084 NMT1/THI5 like D9C11_16265 PF00528 Binding-protein-dependent transport system inner membrane component D9C11_16280 PF00253 Ribosomal protein S14p/S29e D9C11_16290 PF01381 Helix-turn-helix D9C11_16305 PF08331 Domain of unknown function (DUF1730) D9C11_16310 PF12671 Putative amidase domain D9C11_16315 PF00588 SpoU rRNA Methylase family D9C11_16320 PF13171 Protein of unknown function (DUF4004) D9C11_16325 PF04519 Polymer-forming cytoskeletal D9C11_16335 PF06798 PrkA serine protein kinase C-terminal domain D9C11_16335 PF08298 PrkA AAA domain D9C11_16340 PF04285 Protein of unknown function (DUF444) D9C11_16355 PF07690 Major Facilitator Superfamily D9C11_16360 PF03358 NADPH-dependent FMN reductase D9C11_16380 PF00392 Bacterial regulatory proteins, gntR family D9C11_16385 PF00005 ABC transporter D9C11_16390 PF00005 ABC transporter D9C11_16395 PF12679 ABC-2 family transporter protein D9C11_16400 PF00313 'Cold-shock' DNA-binding domain D9C11_16410 PF03180 NLPA lipoprotein D9C11_16420 PF00375 Sodium:dicarboxylate symporter family D9C11_16425 PF00589 Phage integrase family D9C11_16425 PF14659 Phage integrase, N-terminal SAM-like domain D9C11_16430 PF06114 IrrE N-terminal-like domain D9C11_16435 PF01381 Helix-turn-helix D9C11_16460 PF06125 Bacterial protein of unknown function (DUF961) D9C11_16475 PF02486 Replication initiation factor D9C11_16475 PF18106 Rolling Circle replication initiation protein N-terminal domain D9C11_16495 PF12642 Conjugative transposon protein TcpC D9C11_16505 PF12648 TcpE family D9C11_16515 PF08960 Domain of unknown function (DUF1874) D9C11_16525 PF00877 NlpC/P60 family D9C11_16535 PF14729 Domain of unknown function with cystatin-like fold (DUF4467) D9C11_16540 PF18801 response regulator aspartate phosphatase H, N terminal D9C11_16550 PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) D9C11_16565 PF02872 5'-nucleotidase, C-terminal domain D9C11_16565 PF00746 LPXTG cell wall anchor motif D9C11_16565 PF00149 Calcineurin-like phosphoesterase D9C11_16565 PF00565 Staphylococcal nuclease homologue D9C11_16570 PF04203 Sortase domain D9C11_16575 PF01479 S4 domain D9C11_16575 PF00849 RNA pseudouridylate synthase D9C11_16580 PF17326 Family of unknown function (DUF5365) D9C11_16585 PF00571 CBS domain D9C11_16590 PF13419 Haloacid dehalogenase-like hydrolase D9C11_16595 PF00583 Acetyltransferase (GNAT) family D9C11_16595 PF00795 Carbon-nitrogen hydrolase D9C11_16605 PF00202 Aminotransferase class-III D9C11_16610 PF04309 Glycerol-3-phosphate responsive antiterminator D9C11_16615 PF00230 Major intrinsic protein D9C11_16620 PF00370 FGGY family of carbohydrate kinases, N-terminal domain D9C11_16620 PF02782 FGGY family of carbohydrate kinases, C-terminal domain D9C11_16625 PF16901 C-terminal domain of alpha-glycerophosphate oxidase D9C11_16625 PF01266 FAD dependent oxidoreductase D9C11_16630 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III D9C11_16630 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II D9C11_16630 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I D9C11_16630 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain D9C11_16635 PF13185 GAF domain D9C11_16635 PF07730 Histidine kinase D9C11_16640 PF00196 Bacterial regulatory proteins, luxR family D9C11_16640 PF00072 Response regulator receiver domain D9C11_16645 PF03358 NADPH-dependent FMN reductase D9C11_16650 PF14148 YhdB-like protein D9C11_16660 PF13028 Protein of unknown function (DUF3889) D9C11_16665 PF01476 LysM domain D9C11_16665 PF00877 NlpC/P60 family D9C11_16670 PF02082 Transcriptional regulator D9C11_16675 PF05552 Conserved TM helix D9C11_16680 PF04293 SpoVR like protein D9C11_16685 PF00245 Alkaline phosphatase D9C11_16690 PF01476 LysM domain D9C11_16690 PF00877 NlpC/P60 family D9C11_16695 PF03466 LysR substrate binding domain D9C11_16695 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D9C11_16700 PF00285 Citrate synthase, C-terminal domain D9C11_16710 PF13520 Amino acid permease D9C11_16715 PF00209 Sodium:neurotransmitter symporter family D9C11_16720 PF00155 Aminotransferase class I and II D9C11_16720 PF00392 Bacterial regulatory proteins, gntR family D9C11_16725 PF00583 Acetyltransferase (GNAT) family D9C11_16735 PF17453 Sigma-M inhibitor D9C11_16740 PF13800 Sigma factor regulator N-terminal D9C11_16740 PF13791 Sigma factor regulator C-terminal D9C11_16745 PF04542 Sigma-70 region 2 D9C11_16745 PF08281 Sigma-70, region 4 D9C11_16750 PF00248 Aldo/keto reductase family D9C11_16755 PF01553 Acyltransferase D9C11_16765 PF03471 Transporter associated domain D9C11_16765 PF01595 Cyclin M transmembrane N-terminal domain D9C11_16765 PF00571 CBS domain D9C11_16770 PF13411 MerR HTH family regulatory protein D9C11_16780 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) D9C11_16795 PF02537 CrcB-like protein, Camphor Resistance (CrcB) D9C11_16800 PF02537 CrcB-like protein, Camphor Resistance (CrcB) D9C11_16805 PF03009 Glycerophosphoryl diester phosphodiesterase family D9C11_16810 PF17444 Uncharacterized YhdX-like D9C11_16815 PF00924 Mechanosensitive ion channel D9C11_16820 PF02146 Sir2 family D9C11_16825 PF01522 Polysaccharide deacetylase D9C11_16830 PF01063 Amino-transferase class IV D9C11_16835 PF03553 Na+/H+ antiporter family D9C11_16840 PF00582 Universal stress protein family D9C11_16850 PF00664 ABC transporter transmembrane region D9C11_16850 PF00005 ABC transporter D9C11_16855 PF00005 ABC transporter D9C11_16855 PF00664 ABC transporter transmembrane region D9C11_16860 PF13460 NAD(P)H-binding D9C11_16870 PF00269 Small, acid-soluble spore proteins, alpha/beta type D9C11_16875 PF17277 Family of unknown function (DUF5342) D9C11_16880 PF14398 YheC/D like ATP-grasp D9C11_16885 PF14398 YheC/D like ATP-grasp D9C11_16890 PF04286 Protein of unknown function (DUF445) D9C11_16895 PF06133 Control of competence regulator ComK, YlbF/YmcA D9C11_16910 PF04055 Radical SAM superfamily D9C11_16915 PF00999 Sodium/hydrogen exchanger family D9C11_16920 PF02080 TrkA-C domain D9C11_16930 PF00378 Enoyl-CoA hydratase/isomerase D9C11_16935 PF14120 YhzD-like protein D9C11_16940 PF13732 Domain of unknown function (DUF4162) D9C11_16940 PF00005 ABC transporter D9C11_16950 PF00149 Calcineurin-like phosphoesterase D9C11_16955 PF13514 AAA domain D9C11_16960 PF01966 HD domain D9C11_16965 PF14147 Sporulation protein YhaL D9C11_16975 PF09680 Family of unknown function D9C11_16980 PF09680 Family of unknown function D9C11_16990 PF11667 Putative zincin peptidase D9C11_16995 PF08963 Protein of unknown function (DUF1878) D9C11_17000 PF01047 MarR family D9C11_17005 PF12732 YtxH-like protein D9C11_17015 PF17099 Tryptophan transporter TrpP D9C11_17020 PF00266 Aminotransferase class-V D9C11_17025 PF01230 HIT domain D9C11_17030 PF00005 ABC transporter D9C11_17035 PF05975 Bacterial ABC transporter protein EcsB D9C11_17040 PF12787 EcsC protein family D9C11_17045 PF01546 Peptidase family M20/M25/M40 D9C11_17045 PF07687 Peptidase dimerisation domain D9C11_17075 PF03992 Antibiotic biosynthesis monooxygenase D9C11_17080 PF00905 Penicillin binding protein transpeptidase domain D9C11_17080 PF00912 Transglycosylase D9C11_17085 PF01208 Uroporphyrinogen decarboxylase (URO-D) D9C11_17100 PF17932 Tetracyclin repressor-like, C-terminal domain D9C11_17100 PF00440 Bacterial regulatory proteins, tetR family D9C11_17110 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal D9C11_17110 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III D9C11_17115 PF10086 YhfC intramembrane metalloprotease D9C11_17125 PF05343 M42 glutamyl aminopeptidase D9C11_17130 PF04266 ASCH domain D9C11_17135 PF00375 Sodium:dicarboxylate symporter family D9C11_17140 PF14149 YhfH-like protein D9C11_17145 PF12706 Beta-lactamase superfamily domain D9C11_17150 PF10437 Bacterial lipoate protein ligase C-terminus D9C11_17150 PF03099 Biotin/lipoate A/B protein ligase family D9C11_17155 PF13460 NAD(P)H-binding D9C11_17160 PF00501 AMP-binding enzyme D9C11_17160 PF13193 AMP-binding enzyme C-terminal domain D9C11_17170 PF16491 CAAX prenyl protease N-terminal, five membrane helices D9C11_17170 PF01435 Peptidase family M48 D9C11_17175 PF00082 Subtilase family D9C11_17175 PF05922 Peptidase inhibitor I9 D9C11_17180 PF00583 Acetyltransferase (GNAT) family D9C11_17185 PF00107 Zinc-binding dehydrogenase D9C11_17185 PF08240 Alcohol dehydrogenase GroES-like domain D9C11_17190 PF01497 Periplasmic binding protein D9C11_17195 PF00300 Histidine phosphatase superfamily (branch 1) D9C11_17200 PF00108 Thiolase, N-terminal domain D9C11_17200 PF02803 Thiolase, C-terminal domain D9C11_17205 PF00501 AMP-binding enzyme D9C11_17205 PF13193 AMP-binding enzyme C-terminal domain D9C11_17210 PF02632 BioY family D9C11_17215 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain D9C11_17230 PF08858 IDEAL domain D9C11_17235 PF06338 ComK protein D9C11_17245 PF05901 Excalibur calcium-binding domain D9C11_17250 PF00474 Sodium:solute symporter family D9C11_17255 PF11755 Protein of unknown function (DUF3311) D9C11_17265 PF09335 SNARE associated Golgi protein D9C11_17270 PF10502 Signal peptidase, peptidase S26 D9C11_17280 PF01047 MarR family D9C11_17285 PF05145 Transition state regulatory protein AbrB D9C11_17290 PF07690 Major Facilitator Superfamily D9C11_17295 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle D9C11_17295 PF12793 Sugar transport-related sRNA regulator N-term D9C11_17310 PF03860 Domain of Unknown Function (DUF326) D9C11_17315 PF02915 Rubrerythrin D9C11_17320 PF13361 UvrD-like helicase C-terminal domain D9C11_17320 PF12705 PD-(D/E)XK nuclease superfamily D9C11_17325 PF12705 PD-(D/E)XK nuclease superfamily D9C11_17325 PF13361 UvrD-like helicase C-terminal domain D9C11_17325 PF00580 UvrD/REP helicase N-terminal domain D9C11_17330 PF12320 Type 5 capsule protein repressor C-terminal domain D9C11_17330 PF00149 Calcineurin-like phosphoesterase D9C11_17335 PF13476 AAA domain D9C11_17345 PF10676 Spore germination protein gerPA/gerPF D9C11_17350 PF10970 Spore germination protein GerPE D9C11_17360 PF10737 Spore germination protein GerPC D9C11_17365 PF10803 Spore germination GerPB D9C11_17370 PF10676 Spore germination protein gerPA/gerPF D9C11_17375 PF09388 Spo0E like sporulation regulatory protein D9C11_17380 PF08757 CotH kinase protein D9C11_17390 PF07457 Protein of unknown function (DUF1516) D9C11_17395 PF00082 Subtilase family D9C11_17395 PF17936 Bacterial Ig domain D9C11_17400 PF10949 Protein of unknown function (DUF2777) D9C11_17405 PF00733 Asparagine synthase D9C11_17405 PF13537 Glutamine amidotransferase domain D9C11_17415 PF01554 MatE D9C11_17420 PF02311 AraC-like ligand binding domain D9C11_17420 PF12833 Helix-turn-helix domain D9C11_17425 PF00356 Bacterial regulatory proteins, lacI family D9C11_17430 PF02894 Oxidoreductase family, C-terminal alpha/beta domain D9C11_17430 PF01408 Oxidoreductase family, NAD-binding Rossmann fold D9C11_17435 PF05163 DinB family D9C11_17440 PF01810 LysE type translocator D9C11_17445 PF00392 Bacterial regulatory proteins, gntR family D9C11_17445 PF00155 Aminotransferase class I and II D9C11_17450 PF13599 Pentapeptide repeats (9 copies) D9C11_17455 PF08386 TAP-like protein D9C11_17455 PF00561 alpha/beta hydrolase fold D9C11_17465 PF01747 ATP-sulfurylase D9C11_17465 PF14306 PUA-like domain D9C11_17470 PF01507 Phosphoadenosine phosphosulfate reductase family D9C11_17475 PF04029 2-phosphosulpholactate phosphatase D9C11_17480 PF02679 (2R)-phospho-3-sulfolactate synthase (ComA) D9C11_17485 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 D9C11_17495 PF01526 Tn3 transposase DDE domain D9C11_17495 PF13700 Domain of unknown function (DUF4158) D9C11_17500 PF01526 Tn3 transposase DDE domain D9C11_17500 PF13700 Domain of unknown function (DUF4158) D9C11_17510 PF01520 N-acetylmuramoyl-L-alanine amidase D9C11_17510 PF05036 Sporulation related domain D9C11_17515 PF03323 Bacillus/Clostridium GerA spore germination protein D9C11_17545 PF03862 SpoVAC/SpoVAEB sporulation membrane protein D9C11_17550 PF07451 Stage V sporulation protein AD (SpoVAD) D9C11_17555 PF03862 SpoVAC/SpoVAEB sporulation membrane protein D9C11_17565 PF04239 Protein of unknown function (DUF421) D9C11_17575 PF13396 Phospholipase_D-nuclease N-terminal D9C11_17575 PF13091 PLD-like domain D9C11_17580 PF04239 Protein of unknown function (DUF421) D9C11_17590 PF18014 Acetyltransferase (GNAT) domain D9C11_17590 PF13673 Acetyltransferase (GNAT) domain D9C11_17595 PF13673 Acetyltransferase (GNAT) domain D9C11_17600 PF02219 Methylenetetrahydrofolate reductase D9C11_17600 PF02574 Homocysteine S-methyltransferase D9C11_17605 PF04461 Protein of unknown function (DUF520) D9C11_17610 PF17783 CvfB-like winged helix domain D9C11_17610 PF13509 S1 domain D9C11_17615 PF12650 Domain of unknown function (DUF3784) D9C11_17620 PF02645 Uncharacterised protein, DegV family COG1307 D9C11_17625 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 D9C11_17625 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) D9C11_17630 PF12690 Intracellular proteinase inhibitor D9C11_17635 PF12758 Protein of unknown function (DUF3813) D9C11_17645 PF00326 Prolyl oligopeptidase family D9C11_17650 PF01883 Iron-sulfur cluster assembly protein D9C11_17660 PF01565 FAD binding domain D9C11_17665 PF07690 Major Facilitator Superfamily D9C11_17670 PF02774 Semialdehyde dehydrogenase, dimerisation domain D9C11_17670 PF01118 Semialdehyde dehydrogenase, NAD binding domain D9C11_17675 PF01960 ArgJ family D9C11_17680 PF00696 Amino acid kinase family D9C11_17685 PF00202 Aminotransferase class-III D9C11_17690 PF00117 Glutamine amidotransferase class-I D9C11_17690 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain D9C11_17695 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain D9C11_17695 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain D9C11_17700 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain D9C11_17700 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain D9C11_17705 PF14168 YjzC-like protein D9C11_17710 PF11151 Protein of unknown function (DUF2929) D9C11_17725 PF02608 ABC transporter substrate-binding protein PnrA-like D9C11_17730 PF10815 ComZ D9C11_17740 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III D9C11_17740 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal D9C11_17745 PF02801 Beta-ketoacyl synthase, C-terminal domain D9C11_17745 PF00109 Beta-ketoacyl synthase, N-terminal domain D9C11_17750 PF10026 Predicted Zn-dependent protease (DUF2268) D9C11_17755 PF00005 ABC transporter D9C11_17755 PF08352 Oligopeptide/dipeptide transporter, C-terminal region D9C11_17760 PF00005 ABC transporter D9C11_17760 PF08352 Oligopeptide/dipeptide transporter, C-terminal region D9C11_17765 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle D9C11_17770 PF00528 Binding-protein-dependent transport system inner membrane component D9C11_17775 PF00528 Binding-protein-dependent transport system inner membrane component D9C11_17775 PF12911 N-terminal TM domain of oligopeptide transport permease C D9C11_17780 PF12227 Protein of unknown function (DUF3603) D9C11_17785 PF00579 tRNA synthetases class I (W and Y) D9C11_17790 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle D9C11_17795 PF00528 Binding-protein-dependent transport system inner membrane component D9C11_17800 PF12911 N-terminal TM domain of oligopeptide transport permease C D9C11_17800 PF00528 Binding-protein-dependent transport system inner membrane component D9C11_17805 PF00005 ABC transporter D9C11_17805 PF08352 Oligopeptide/dipeptide transporter, C-terminal region D9C11_17810 PF08352 Oligopeptide/dipeptide transporter, C-terminal region D9C11_17810 PF00005 ABC transporter D9C11_17815 PF07690 Major Facilitator Superfamily D9C11_17820 PF13508 Acetyltransferase (GNAT) domain D9C11_17825 PF03960 ArsC family D9C11_17830 PF03741 Integral membrane protein TerC family D9C11_17840 PF05389 Negative regulator of genetic competence (MecA) D9C11_17850 PF06054 Competence protein CoiA-like family D9C11_17855 PF01432 Peptidase family M3 D9C11_17855 PF08439 Oligopeptidase F D9C11_17875 PF01152 Bacterial-like globin D9C11_17880 PF01464 Transglycosylase SLT domain D9C11_17885 PF01928 CYTH domain D9C11_17895 PF04607 Region found in RelA / SpoT proteins D9C11_17900 PF01513 ATP-NAD kinase D9C11_17905 PF00849 RNA pseudouridylate synthase D9C11_17910 PF00149 Calcineurin-like phosphoesterase D9C11_17915 PF00999 Sodium/hydrogen exchanger family D9C11_17915 PF02254 TrkA-N domain D9C11_17915 PF02080 TrkA-C domain D9C11_17920 PF03070 TENA/THI-4/PQQC family D9C11_17930 PF01266 FAD dependent oxidoreductase D9C11_17935 PF02597 ThiS family D9C11_17940 PF05690 Thiazole biosynthesis protein ThiG D9C11_17945 PF00899 ThiF family D9C11_17950 PF08543 Phosphomethylpyrimidine kinase D9C11_17960 PF14153 Spore coat protein CotO D9C11_17965 PF10612 Spore coat protein Z D9C11_17975 PF07552 Spore Coat Protein X and V domain D9C11_17985 PF07552 Spore Coat Protein X and V domain D9C11_17990 PF07098 Protein of unknown function (DUF1360) D9C11_18005 PF14069 Stage VI sporulation protein F D9C11_18010 PF00580 UvrD/REP helicase N-terminal domain D9C11_18010 PF13361 UvrD-like helicase C-terminal domain D9C11_18020 PF13673 Acetyltransferase (GNAT) domain D9C11_18030 PF00756 Putative esterase D9C11_18035 PF01053 Cys/Met metabolism PLP-dependent enzyme D9C11_18040 PF01053 Cys/Met metabolism PLP-dependent enzyme D9C11_18045 PF13302 Acetyltransferase (GNAT) domain D9C11_18050 PF05684 Protein of unknown function (DUF819) D9C11_18060 PF00589 Phage integrase family D9C11_18060 PF02899 Phage integrase, N-terminal SAM-like domain D9C11_18065 PF06114 IrrE N-terminal-like domain D9C11_18080 PF01381 Helix-turn-helix D9C11_18100 PF01381 Helix-turn-helix D9C11_18105 PF17448 Uncharacterized YqaH-like D9C11_18115 PF09466 Hypothetical protein Yqai D9C11_18125 PF09588 YqaJ-like viral recombinase domain D9C11_18130 PF03837 RecT family D9C11_18135 PF07261 Replication initiation and membrane attachment D9C11_18140 PF01695 IstB-like ATP binding protein D9C11_18165 PF17356 Phage-like element PBSX protein XtrA D9C11_18180 PF00145 C-5 cytosine-specific DNA methylase D9C11_18215 PF10668 Phage terminase small subunit D9C11_18220 PF17288 Terminase RNAseH like domain D9C11_18220 PF04466 Phage terminase large subunit D9C11_18290 PF00041 Fibronectin type III domain D9C11_18290 PF00704 Glycosyl hydrolases family 18 D9C11_18350 PF10779 Haemolysin XhlA D9C11_18355 PF04688 SPP1 phage holin D9C11_18360 PF01471 Putative peptidoglycan binding domain D9C11_18360 PF01510 N-acetylmuramoyl-L-alanine amidase D9C11_18370 PF04740 LXG domain of WXG superfamily D9C11_18385 PF08863 YolD-like protein D9C11_18400 PF00589 Phage integrase family D9C11_18425 PF00872 Transposase, Mutator family D9C11_18435 PF13302 Acetyltransferase (GNAT) domain D9C11_18445 PF04073 Aminoacyl-tRNA editing domain D9C11_18450 PF13783 Domain of unknown function (DUF4177) D9C11_18465 PF01040 UbiA prenyltransferase family D9C11_18475 PF11738 Protein of unknown function (DUF3298) D9C11_18475 PF13739 Deacetylase PdaC D9C11_18475 PF01522 Polysaccharide deacetylase D9C11_18480 PF10901 Protein of unknown function (DUF2690) D9C11_18485 PF14070 Putative motility protein D9C11_18510 PF11611 Domain of unknown function (DUF4352) D9C11_18515 PF00293 NUDIX domain D9C11_18525 PF00067 Cytochrome P450 D9C11_18530 PF04101 Glycosyltransferase family 28 C-terminal domain D9C11_18540 PF02602 Uroporphyrinogen-III synthase HemD D9C11_18545 PF03649 Uncharacterised protein family (UPF0014) D9C11_18550 PF00005 ABC transporter D9C11_18555 PF13536 Putative multidrug resistance efflux transporter D9C11_18565 PF07849 Protein of unknown function (DUF1641) D9C11_18570 PF07992 Pyridine nucleotide-disulphide oxidoreductase D9C11_18575 PF02614 Glucuronate isomerase D9C11_18585 PF02615 Malate/L-lactate dehydrogenase D9C11_18600 PF00106 short chain dehydrogenase D9C11_18610 PF00356 Bacterial regulatory proteins, lacI family D9C11_18615 PF08125 Mannitol dehydrogenase C-terminal domain D9C11_18615 PF01232 Mannitol dehydrogenase Rossmann domain D9C11_18625 PF01925 Sulfite exporter TauE/SafE D9C11_18635 PF05163 DinB family D9C11_18645 PF18801 response regulator aspartate phosphatase H, N terminal D9C11_18655 PF03795 YCII-related domain D9C11_18660 PF01476 LysM domain D9C11_18660 PF01471 Putative peptidoglycan binding domain D9C11_18660 PF01510 N-acetylmuramoyl-L-alanine amidase D9C11_18665 PF08000 Bacterial PH domain D9C11_18670 PF05908 Poly-gamma-glutamate hydrolase D9C11_18680 PF06114 IrrE N-terminal-like domain D9C11_18685 PF01381 Helix-turn-helix D9C11_18700 PF01695 IstB-like ATP binding protein D9C11_18720 PF08281 Sigma-70, region 4 D9C11_18725 PF10668 Phage terminase small subunit D9C11_18725 PF03592 Terminase small subunit D9C11_18730 PF04466 Phage terminase large subunit D9C11_18730 PF17288 Terminase RNAseH like domain D9C11_18735 PF04860 Phage portal protein D9C11_18740 PF14550 Putative phage serine protease XkdF D9C11_18745 PF05065 Phage capsid family D9C11_18750 PF11436 Protein of unknown function (DUF3199) D9C11_18755 PF12206 Domain of unknown function (DUF3599) D9C11_18760 PF04883 Bacteriophage HK97-gp10, putative tail-component D9C11_18775 PF17482 Phage tail sheath C-terminal domain D9C11_18775 PF04984 Phage tail sheath protein subtilisin-like domain D9C11_18775 PF17481 Phage tail sheath protein beta-sandwich domain D9C11_18780 PF09393 Phage tail tube protein D9C11_18785 PF08890 Phage XkdN-like tail assembly chaperone protein, TAC D9C11_18795 PF01464 Transglycosylase SLT domain D9C11_18800 PF01476 LysM domain D9C11_18810 PF10844 Protein of unknown function (DUF2577) D9C11_18815 PF10934 Protein of unknown function (DUF2634) D9C11_18820 PF04865 Baseplate J-like protein D9C11_18825 PF10076 Uncharacterised protein conserved in bacteria (DUF2313) D9C11_18840 PF09636 XkdW protein D9C11_18845 PF09693 Phage uncharacterised protein (Phage_XkdX) D9C11_18855 PF10779 Haemolysin XhlA D9C11_18860 PF04688 SPP1 phage holin D9C11_18865 PF01476 LysM domain D9C11_18865 PF01510 N-acetylmuramoyl-L-alanine amidase D9C11_18865 PF01471 Putative peptidoglycan binding domain D9C11_18875 PF14185 Antitoxin SpoIISB, type II toxin-antitoxin system D9C11_18880 PF14171 Toxin SpoIISA, type II toxin-antitoxin system D9C11_18885 PF01384 Phosphate transporter family D9C11_18890 PF01865 Protein of unknown function DUF47 D9C11_18895 PF13520 Amino acid permease D9C11_18900 PF01609 Transposase DDE domain D9C11_18905 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily D9C11_18915 PF13231 Dolichyl-phosphate-mannose-protein mannosyltransferase D9C11_18920 PF00535 Glycosyl transferase family 2 D9C11_18925 PF13180 PDZ domain D9C11_18930 PF14748 Pyrroline-5-carboxylate reductase dimerisation D9C11_18930 PF03807 NADP oxidoreductase coenzyme F420-dependent D9C11_18935 PF04951 D-aminopeptidase D9C11_18940 PF00528 Binding-protein-dependent transport system inner membrane component D9C11_18945 PF12911 N-terminal TM domain of oligopeptide transport permease C D9C11_18945 PF00528 Binding-protein-dependent transport system inner membrane component D9C11_18950 PF08352 Oligopeptide/dipeptide transporter, C-terminal region D9C11_18950 PF00005 ABC transporter D9C11_18955 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle D9C11_18960 PF17676 LD-carboxypeptidase C-terminal domain D9C11_18960 PF02016 LD-carboxypeptidase N-terminal domain D9C11_18965 PF13378 Enolase C-terminal domain-like D9C11_18965 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain D9C11_18970 PF00877 NlpC/P60 family D9C11_18975 PF00005 ABC transporter D9C11_18975 PF08352 Oligopeptide/dipeptide transporter, C-terminal region D9C11_18980 PF10282 Lactonase, 7-bladed beta-propeller D9C11_18990 PF03061 Thioesterase superfamily D9C11_18995 PF00175 Oxidoreductase NAD-binding domain D9C11_18995 PF00042 Globin D9C11_18995 PF00970 Oxidoreductase FAD-binding domain D9C11_19005 PF04239 Protein of unknown function (DUF421) D9C11_19010 PF12867 DinB superfamily D9C11_19015 PF13302 Acetyltransferase (GNAT) domain D9C11_19020 PF00893 Small Multidrug Resistance protein D9C11_19025 PF00893 Small Multidrug Resistance protein D9C11_19030 PF01842 ACT domain D9C11_19030 PF00551 Formyl transferase D9C11_19035 PF00696 Amino acid kinase family D9C11_19035 PF01472 PUA domain D9C11_19040 PF00171 Aldehyde dehydrogenase family D9C11_19045 PF02566 OsmC-like protein D9C11_19050 PF01047 MarR family D9C11_19055 PF02566 OsmC-like protein D9C11_19065 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region D9C11_19075 PF01717 Cobalamin-independent synthase, Catalytic domain D9C11_19075 PF08267 Cobalamin-independent synthase, N-terminal domain D9C11_19080 PF00082 Subtilase family D9C11_19085 PF01740 STAS domain D9C11_19090 PF02361 Cobalt transport protein D9C11_19095 PF00005 ABC transporter D9C11_19100 PF09819 ABC-type cobalt transport system, permease component D9C11_19105 PF07615 YKOF-related Family D9C11_19110 PF00486 Transcriptional regulatory protein, C terminal D9C11_19110 PF00072 Response regulator receiver domain D9C11_19125 PF03413 Peptidase propeptide and YPEB domain D9C11_19130 PF11132 Transcriptional regulator protein (SplA) D9C11_19140 PF01769 Divalent cation transporter D9C11_19140 PF03448 MgtE intracellular N domain D9C11_19140 PF00571 CBS domain D9C11_19145 PF13411 MerR HTH family regulatory protein D9C11_19160 PF01047 MarR family D9C11_19175 PF00149 Calcineurin-like phosphoesterase D9C11_19185 PF00535 Glycosyl transferase family 2 D9C11_19190 PF01068 ATP dependent DNA ligase domain D9C11_19195 PF02735 Ku70/Ku80 beta-barrel domain D9C11_19205 PF09335 SNARE associated Golgi protein D9C11_19210 PF03741 Integral membrane protein TerC family D9C11_19215 PF04542 Sigma-70 region 2 D9C11_19220 PF12791 Anti-sigma factor N-terminus D9C11_19225 PF00269 Small, acid-soluble spore proteins, alpha/beta type D9C11_19230 PF08876 Domain of unknown function (DUF1836) D9C11_19235 PF01435 Peptidase family M48 D9C11_19240 PF02386 Cation transport protein D9C11_19255 PF01757 Acyltransferase family D9C11_19260 PF13188 PAS domain D9C11_19260 PF13426 PAS domain D9C11_19260 PF00989 PAS fold D9C11_19260 PF00512 His Kinase A (phospho-acceptor) domain D9C11_19260 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D9C11_19265 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain D9C11_19265 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain D9C11_19280 PF01636 Phosphotransferase enzyme family D9C11_19285 PF00795 Carbon-nitrogen hydrolase D9C11_19290 PF00155 Aminotransferase class I and II D9C11_19295 PF02788 Ribulose bisphosphate carboxylase large chain, N-terminal domain D9C11_19295 PF00016 Ribulose bisphosphate carboxylase large chain, catalytic domain D9C11_19305 PF00596 Class II Aldolase and Adducin N-terminal domain D9C11_19310 PF03079 ARD/ARD' family D9C11_19315 PF06803 Protein of unknown function (DUF1232) D9C11_19320 PF09388 Spo0E like sporulation regulatory protein D9C11_19330 PF02743 Cache domain D9C11_19330 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D9C11_19330 PF00512 His Kinase A (phospho-acceptor) domain D9C11_19335 PF01047 MarR family D9C11_19340 PF13677 Membrane MotB of proton-channel complex MotA/MotB D9C11_19340 PF00691 OmpA family D9C11_19345 PF01618 MotA/TolQ/ExbB proton channel family D9C11_19350 PF10431 C-terminal, D2-small domain, of ClpB protein D9C11_19350 PF17871 AAA lid domain D9C11_19350 PF00004 ATPase family associated with various cellular activities (AAA) D9C11_19350 PF07724 AAA domain (Cdc48 subfamily) D9C11_19360 PF06508 Queuosine biosynthesis protein QueC D9C11_19365 PF01242 6-pyruvoyl tetrahydropterin synthase D9C11_19370 PF04055 Radical SAM superfamily D9C11_19375 PF14489 QueF-like protein D9C11_19380 PF11514 Protein of unknown function (DUF3219) D9C11_19385 PF09953 Uncharacterized protein conserved in bacteria (DUF2187) D9C11_19395 PF07486 Cell Wall Hydrolase D9C11_19400 PF01943 Polysaccharide biosynthesis protein D9C11_19405 PF00578 AhpC/TSA family D9C11_19420 PF00557 Metallopeptidase family M24 D9C11_19420 PF01321 Creatinase/Prolidase N-terminal domain D9C11_19425 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family D9C11_19425 PF00356 Bacterial regulatory proteins, lacI family D9C11_19430 PF03123 CAT RNA binding domain D9C11_19430 PF00874 PRD domain D9C11_19435 PF02378 Phosphotransferase system, EIIC D9C11_19435 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 D9C11_19435 PF00367 phosphotransferase system, EIIB D9C11_19440 PF00381 PTS HPr component phosphorylation site D9C11_19445 PF05524 PEP-utilising enzyme, N-terminal D9C11_19445 PF00391 PEP-utilising enzyme, mobile domain D9C11_19445 PF02896 PEP-utilising enzyme, TIM barrel domain D9C11_19450 PF11132 Transcriptional regulator protein (SplA) D9C11_19460 PF00583 Acetyltransferase (GNAT) family D9C11_19465 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain D9C11_19465 PF00672 HAMP domain D9C11_19465 PF02743 Cache domain D9C11_19470 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase D9C11_19470 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase D9C11_19480 PF00872 Transposase, Mutator family D9C11_19490 PF00188 Cysteine-rich secretory protein family D9C11_19495 PF03717 Penicillin-binding Protein dimerisation domain D9C11_19495 PF00905 Penicillin binding protein transpeptidase domain D9C11_19500 PF08447 PAS fold D9C11_19500 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D9C11_19500 PF00512 His Kinase A (phospho-acceptor) domain D9C11_19500 PF00989 PAS fold D9C11_19505 PF00155 Aminotransferase class I and II D9C11_19515 PF00072 Response regulator receiver domain D9C11_19515 PF01584 CheW-like domain D9C11_19520 PF14177 YkyB-like protein D9C11_19525 PF07690 Major Facilitator Superfamily D9C11_19530 PF03734 L,D-transpeptidase catalytic domain D9C11_19530 PF01476 LysM domain D9C11_19535 PF00149 Calcineurin-like phosphoesterase D9C11_19535 PF10518 TAT (twin-arginine translocation) pathway signal sequence D9C11_19560 PF10388 EAL-domain associated signalling protein domain D9C11_19560 PF00563 EAL domain D9C11_19565 PF08796 Protein of unknown function (DUF1797) D9C11_19570 PF04308 Ribonuclease H-like D9C11_19575 PF14156 Antirepressor AbbA D9C11_19585 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D9C11_19585 PF03466 LysR substrate binding domain D9C11_19590 PF00258 Flavodoxin D9C11_19600 PF00258 Flavodoxin D9C11_19605 PF00132 Bacterial transferase hexapeptide (six repeats) D9C11_19605 PF08503 Tetrahydrodipicolinate succinyltransferase N-terminal D9C11_19605 PF14602 Hexapeptide repeat of succinyl-transferase D9C11_19610 PF07687 Peptidase dimerisation domain D9C11_19610 PF01546 Peptidase family M20/M25/M40 D9C11_19615 PF03698 Uncharacterised protein family (UPF0180) D9C11_19620 PF00924 Mechanosensitive ion channel D9C11_19625 PF10417 C-terminal domain of 1-Cys peroxiredoxin D9C11_19625 PF00578 AhpC/TSA family D9C11_19630 PF00578 AhpC/TSA family D9C11_19650 PF12804 MobA-like NTP transferase domain D9C11_19655 PF00899 ThiF family D9C11_19660 PF00994 Probable molybdopterin binding domain D9C11_19660 PF03454 MoeA C-terminal region (domain IV) D9C11_19660 PF03453 MoeA N-terminal region (domain I and II) D9C11_19665 PF03205 Molybdopterin guanine dinucleotide synthesis protein B D9C11_19670 PF02391 MoaE protein D9C11_19675 PF02597 ThiS family D9C11_19680 PF00664 ABC transporter transmembrane region D9C11_19680 PF00005 ABC transporter D9C11_19685 PF00005 ABC transporter D9C11_19685 PF00664 ABC transporter transmembrane region D9C11_19695 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion D9C11_19700 PF00005 ABC transporter D9C11_19705 PF12704 MacB-like periplasmic core domain D9C11_19705 PF02687 FtsX-like permease family D9C11_19710 PF08220 DeoR-like helix-turn-helix domain D9C11_19710 PF00455 DeoR C terminal sensor domain D9C11_19715 PF00294 pfkB family carbohydrate kinase D9C11_19720 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit D9C11_19720 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 D9C11_19725 PF10502 Signal peptidase, peptidase S26 D9C11_19735 PF12848 ABC transporter D9C11_19735 PF00005 ABC transporter D9C11_19755 PF02073 Thermophilic metalloprotease (M29) D9C11_19760 PF17447 Uncharacterized YkpC-like D9C11_19770 PF18277 AbrB C-terminal domain D9C11_19770 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin D9C11_19775 PF00512 His Kinase A (phospho-acceptor) domain D9C11_19775 PF00989 PAS fold D9C11_19775 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D9C11_19780 PF06094 Gamma-glutamyl cyclotransferase, AIG2-like D9C11_19785 PF02080 TrkA-C domain D9C11_19785 PF02254 TrkA-N domain D9C11_19790 PF13382 Adenine deaminase C-terminal domain D9C11_19790 PF01979 Amidohydrolase family D9C11_19795 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain D9C11_19795 PF00753 Metallo-beta-lactamase superfamily D9C11_19795 PF17770 Ribonuclease J C-terminal domain D9C11_19810 PF01327 Polypeptide deformylase D9C11_19820 PF10368 Putative cell-wall binding lipoprotein D9C11_19825 PF00676 Dehydrogenase E1 component D9C11_19830 PF02780 Transketolase, C-terminal domain D9C11_19830 PF02779 Transketolase, pyrimidine binding domain D9C11_19835 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) D9C11_19835 PF02817 e3 binding domain D9C11_19835 PF00364 Biotin-requiring enzyme D9C11_19840 PF07992 Pyridine nucleotide-disulphide oxidoreductase D9C11_19840 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain D9C11_19850 PF13790 SR1 protein D9C11_19855 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain D9C11_19855 PF01276 Orn/Lys/Arg decarboxylase, major domain D9C11_19860 PF05256 Uncharacterised protein family (UPF0223) D9C11_19865 PF06335 Protein of unknown function (DUF1054) D9C11_19875 PF00459 Inositol monophosphatase family D9C11_19880 PF00583 Acetyltransferase (GNAT) family D9C11_19895 PF01447 Thermolysin metallopeptidase, catalytic domain D9C11_19895 PF03413 Peptidase propeptide and YPEB domain D9C11_19895 PF02868 Thermolysin metallopeptidase, alpha-helical domain D9C11_19895 PF07504 Fungalysin/Thermolysin Propeptide Motif D9C11_19910 PF04542 Sigma-70 region 2 D9C11_19910 PF08281 Sigma-70, region 4 D9C11_19915 PF13490 Putative zinc-finger D9C11_19925 PF17259 Family of unknown function (DUF5325) D9C11_19935 PF14036 YlaH-like protein D9C11_19940 PF09963 Uncharacterized protein conserved in bacteria (DUF2197) D9C11_19945 PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) D9C11_19960 PF04960 Glutaminase D9C11_19965 PF07408 Protein of unknown function (DUF1507) D9C11_19970 PF01098 Cell cycle protein D9C11_19975 PF02436 Conserved carboxylase domain D9C11_19975 PF00682 HMGL-like D9C11_19975 PF00364 Biotin-requiring enzyme D9C11_19975 PF00289 Biotin carboxylase, N-terminal domain D9C11_19975 PF02785 Biotin carboxylase C-terminal domain D9C11_19975 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain D9C11_19980 PF02628 Cytochrome oxidase assembly protein D9C11_19985 PF01040 UbiA prenyltransferase family D9C11_19990 PF02790 Cytochrome C oxidase subunit II, transmembrane domain D9C11_19990 PF00034 Cytochrome c D9C11_19990 PF00116 Cytochrome C oxidase subunit II, periplasmic domain D9C11_19995 PF00115 Cytochrome C and Quinol oxidase polypeptide I D9C11_20000 PF00510 Cytochrome c oxidase subunit III D9C11_20005 PF03626 Prokaryotic Cytochrome C oxidase subunit IV D9C11_20010 PF09678 Cytochrome c oxidase caa3 assembly factor (Caa3_CtaG) D9C11_20015 PF08868 YugN-like family D9C11_20020 PF00571 CBS domain D9C11_20025 PF14504 CAP-associated N-terminal D9C11_20025 PF00188 Cysteine-rich secretory protein family D9C11_20030 PF14071 Putative coat protein D9C11_20035 PF14003 YlbE-like protein D9C11_20040 PF06133 Control of competence regulator ComK, YlbF/YmcA D9C11_20045 PF09902 Uncharacterized protein conserved in bacteria (DUF2129) D9C11_20055 PF01467 Cytidylyltransferase-like D9C11_20060 PF07670 Nucleoside recognition D9C11_20065 PF01734 Patatin-like phospholipase D9C11_20070 PF13180 PDZ domain D9C11_20070 PF05362 Lon protease (S16) C-terminal proteolytic domain D9C11_20085 PF05636 HIGH Nucleotidyl Transferase D9C11_20095 PF02620 Large ribosomal RNA subunit accumulation protein YceD D9C11_20100 PF01783 Ribosomal L32p protein family D9C11_20110 PF00583 Acetyltransferase (GNAT) family D9C11_20115 PF08546 Ketopantoate reductase PanE/ApbA C terminal D9C11_20115 PF02558 Ketopantoate reductase PanE/ApbA D9C11_20120 PF10079 Bacillithiol biosynthesis BshC D9C11_20125 PF02381 MraZ protein, putative antitoxin-like D9C11_20130 PF01795 MraW methylase family D9C11_20145 PF03717 Penicillin-binding Protein dimerisation domain D9C11_20145 PF03793 PASTA domain D9C11_20145 PF00905 Penicillin binding protein transpeptidase domain D9C11_20150 PF08245 Mur ligase middle domain D9C11_20150 PF01225 Mur ligase family, catalytic domain D9C11_20150 PF02875 Mur ligase family, glutamate ligase domain D9C11_20155 PF00953 Glycosyl transferase family 4 D9C11_20155 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 D9C11_20160 PF02875 Mur ligase family, glutamate ligase domain D9C11_20160 PF08245 Mur ligase middle domain D9C11_20165 PF01098 Cell cycle protein D9C11_20170 PF04101 Glycosyltransferase family 28 C-terminal domain D9C11_20170 PF03033 Glycosyltransferase family 28 N-terminal domain D9C11_20175 PF01565 FAD binding domain D9C11_20175 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain D9C11_20180 PF08478 POTRA domain, FtsQ-type D9C11_20185 PF05949 Bacterial protein of unknown function (DUF881) D9C11_20190 PF05949 Bacterial protein of unknown function (DUF881) D9C11_20195 PF06947 Protein of unknown function (DUF1290) D9C11_20200 PF02491 SHS2 domain inserted in FTSA D9C11_20205 PF12327 FtsZ family, C-terminal domain D9C11_20205 PF00091 Tubulin/FtsZ family, GTPase domain D9C11_20210 PF05922 Peptidase inhibitor I9 D9C11_20210 PF00082 Subtilase family D9C11_20215 PF03419 Sporulation factor SpoIIGA D9C11_20220 PF04545 Sigma-70, region 4 D9C11_20220 PF04542 Sigma-70 region 2 D9C11_20225 PF04542 Sigma-70 region 2 D9C11_20225 PF04539 Sigma-70 region 3 D9C11_20225 PF04545 Sigma-70, region 4 D9C11_20230 PF00005 ABC transporter D9C11_20240 PF05239 PRC-barrel domain D9C11_20250 PF01168 Alanine racemase, N-terminal domain D9C11_20255 PF04472 Cell division protein SepF D9C11_20260 PF02325 YGGT family D9C11_20265 PF01479 S4 domain D9C11_20265 PF17774 Putative RNA-binding domain in YlmH D9C11_20270 PF05103 DivIVA protein D9C11_20275 PF08264 Anticodon-binding domain of tRNA D9C11_20275 PF00133 tRNA synthetases class I (I, L, M and V) D9C11_20280 PF01258 Prokaryotic dksA/traR C4-type zinc finger D9C11_20285 PF01252 Signal peptidase (SPase) II D9C11_20290 PF00849 RNA pseudouridylate synthase D9C11_20290 PF01479 S4 domain D9C11_20295 PF00156 Phosphoribosyl transferase domain D9C11_20300 PF00860 Permease family D9C11_20305 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain D9C11_20305 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain D9C11_20310 PF01979 Amidohydrolase family D9C11_20315 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain D9C11_20315 PF00117 Glutamine amidotransferase class-I D9C11_20320 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain D9C11_20320 PF02142 MGS-like domain D9C11_20320 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain D9C11_20325 PF00175 Oxidoreductase NAD-binding domain D9C11_20325 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B D9C11_20330 PF01180 Dihydroorotate dehydrogenase D9C11_20335 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family D9C11_20340 PF00156 Phosphoribosyl transferase domain D9C11_20345 PF01507 Phosphoadenosine phosphosulfate reductase family D9C11_20350 PF01384 Phosphate transporter family D9C11_20355 PF14306 PUA-like domain D9C11_20355 PF01747 ATP-sulfurylase D9C11_20365 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases D9C11_20370 PF01903 CbiX D9C11_20385 PF00690 Cation transporter/ATPase, N-terminus D9C11_20385 PF00689 Cation transporting ATPase, C-terminus D9C11_20390 PF03755 YicC-like family, N-terminal region D9C11_20390 PF08340 Domain of unknown function (DUF1732) D9C11_20395 PF04025 Domain of unknown function (DUF370) D9C11_20400 PF00625 Guanylate kinase D9C11_20405 PF01192 RNA polymerase Rpb6 D9C11_20410 PF04127 DNA / pantothenate metabolism flavoprotein D9C11_20410 PF02441 Flavoprotein D9C11_20415 PF17764 3′ DNA-binding domain (3′BD) D9C11_20415 PF04851 Type III restriction enzyme, res subunit D9C11_20415 PF18074 Primosomal protein N C-terminal domain D9C11_20415 PF00271 Helicase conserved C-terminal domain D9C11_20415 PF18319 PriA DNA helicase Cys-rich region (CRR) domain D9C11_20420 PF01327 Polypeptide deformylase D9C11_20425 PF02911 Formyl transferase, C-terminal domain D9C11_20425 PF00551 Formyl transferase D9C11_20430 PF01189 16S rRNA methyltransferase RsmB/F D9C11_20430 PF01029 NusB family D9C11_20435 PF04055 Radical SAM superfamily D9C11_20445 PF00069 Protein kinase domain D9C11_20445 PF03793 PASTA domain D9C11_20450 PF16745 RsgA N-terminal domain D9C11_20450 PF03193 RsgA GTPase D9C11_20455 PF00834 Ribulose-phosphate 3 epimerase family D9C11_20460 PF04265 Thiamin pyrophosphokinase, vitamin B1 binding domain D9C11_20460 PF04263 Thiamin pyrophosphokinase, catalytic domain D9C11_20465 PF08183 Stage V sporulation protein family D9C11_20470 PF00830 Ribosomal L28 family D9C11_20475 PF03780 Asp23 family, cell envelope-related function D9C11_20480 PF02734 DAK2 domain D9C11_20480 PF13684 Dihydroxyacetone kinase family D9C11_20485 PF03315 Serine dehydratase beta chain D9C11_20485 PF01842 ACT domain D9C11_20490 PF03313 Serine dehydratase alpha chain D9C11_20495 PF00270 DEAD/DEAH box helicase D9C11_20495 PF00271 Helicase conserved C-terminal domain D9C11_20495 PF17191 RecG wedge domain D9C11_20500 PF03061 Thioesterase superfamily D9C11_20505 PF02504 Fatty acid synthesis protein D9C11_20510 PF00698 Acyl transferase domain D9C11_20520 PF00550 Phosphopantetheine attachment site D9C11_20525 PF00035 Double-stranded RNA binding motif D9C11_20525 PF14622 Ribonuclease-III-like D9C11_20530 PF02463 RecF/RecN/SMC N terminal domain D9C11_20530 PF06470 SMC proteins Flexible Hinge Domain D9C11_20535 PF00448 SRP54-type protein, GTPase domain D9C11_20535 PF02881 SRP54-type protein, helical bundle domain D9C11_20545 PF04297 Putative helix-turn-helix protein, YlxM / p13 like D9C11_20550 PF00448 SRP54-type protein, GTPase domain D9C11_20550 PF02881 SRP54-type protein, helical bundle domain D9C11_20550 PF02978 Signal peptide binding domain D9C11_20555 PF00886 Ribosomal protein S16 D9C11_20565 PF11068 YlqD protein D9C11_20570 PF01782 RimM N-terminal domain D9C11_20570 PF05239 PRC-barrel domain D9C11_20575 PF01746 tRNA (Guanine-1)-methyltransferase D9C11_20580 PF01245 Ribosomal protein L19 D9C11_20585 PF01926 50S ribosome-binding GTPase D9C11_20590 PF01351 Ribonuclease HII D9C11_20600 PF01312 FlhB HrpN YscU SpaS Family D9C11_20605 PF00549 CoA-ligase D9C11_20605 PF08442 ATP-grasp domain D9C11_20610 PF00549 CoA-ligase D9C11_20610 PF02629 CoA binding domain D9C11_20615 PF02481 DNA recombination-mediator protein A D9C11_20620 PF01396 Topoisomerase DNA binding C4 zinc finger D9C11_20620 PF01131 DNA topoisomerase D9C11_20620 PF01751 Toprim domain D9C11_20625 PF01134 Glucose inhibited division protein A D9C11_20630 PF02899 Phage integrase, N-terminal SAM-like domain D9C11_20630 PF00589 Phage integrase family D9C11_20635 PF00227 Proteasome subunit D9C11_20640 PF07724 AAA domain (Cdc48 subfamily) D9C11_20640 PF10431 C-terminal, D2-small domain, of ClpB protein D9C11_20640 PF00004 ATPase family associated with various cellular activities (AAA) D9C11_20645 PF08222 CodY helix-turn-helix domain D9C11_20645 PF06018 CodY GAF-like domain D9C11_20650 PF00460 Flagella basal body rod protein D9C11_20655 PF00460 Flagella basal body rod protein D9C11_20655 PF06429 Flagellar basal body rod FlgEFG protein C-terminal D9C11_20660 PF02049 Flagellar hook-basal body complex protein FliE D9C11_20665 PF01514 Secretory protein of YscJ/FliF family D9C11_20665 PF08345 Flagellar M-ring protein C-terminal D9C11_20670 PF14841 FliG middle domain D9C11_20670 PF01706 FliG C-terminal domain D9C11_20670 PF14842 FliG N-terminal domain D9C11_20675 PF02108 Flagellar assembly protein FliH D9C11_20680 PF02874 ATP synthase alpha/beta family, beta-barrel domain D9C11_20680 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain D9C11_20680 PF18269 T3SS EscN ATPase C-terminal domain D9C11_20685 PF02050 Flagellar FliJ protein D9C11_20690 PF03448 MgtE intracellular N domain D9C11_20695 PF02120 Flagellar hook-length control protein FliK D9C11_20700 PF03963 Flagellar hook capping protein - N-terminal region D9C11_20705 PF00460 Flagella basal body rod protein D9C11_20705 PF06429 Flagellar basal body rod FlgEFG protein C-terminal D9C11_20710 PF06289 Flagellar and Swarming motility proteins D9C11_20715 PF03748 Flagellar basal body-associated protein FliL D9C11_20720 PF02154 Flagellar motor switch protein FliM D9C11_20720 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term D9C11_20725 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term D9C11_20725 PF04509 CheC-like family D9C11_20730 PF00072 Response regulator receiver domain D9C11_20735 PF04347 Flagellar biosynthesis protein, FliO D9C11_20740 PF00813 FliP family D9C11_20745 PF01313 Bacterial export proteins, family 3 D9C11_20750 PF01311 Bacterial export proteins, family 1 D9C11_20755 PF01312 FlhB HrpN YscU SpaS Family D9C11_20760 PF00771 FHIPEP family D9C11_20765 PF00448 SRP54-type protein, GTPase domain D9C11_20770 PF10609 NUBPL iron-transfer P-loop NTPase D9C11_20775 PF00072 Response regulator receiver domain D9C11_20775 PF01339 CheB methylesterase D9C11_20780 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D9C11_20780 PF01627 Hpt domain D9C11_20780 PF02895 Signal transducing histidine kinase, homodimeric domain D9C11_20780 PF01584 CheW-like domain D9C11_20780 PF07194 P2 response regulator binding domain D9C11_20785 PF01584 CheW-like domain D9C11_20790 PF04509 CheC-like family D9C11_20795 PF03975 CheD chemotactic sensory transduction D9C11_20800 PF04542 Sigma-70 region 2 D9C11_20800 PF04545 Sigma-70, region 4 D9C11_20800 PF04539 Sigma-70 region 3 D9C11_20810 PF00318 Ribosomal protein S2 D9C11_20815 PF00889 Elongation factor TS D9C11_20820 PF00696 Amino acid kinase family D9C11_20825 PF01765 Ribosome recycling factor D9C11_20830 PF01255 Putative undecaprenyl diphosphate synthase D9C11_20840 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain D9C11_20840 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase D9C11_20840 PF13288 DXP reductoisomerase C-terminal domain D9C11_20845 PF02163 Peptidase family M50 D9C11_20845 PF17820 PDZ domain D9C11_20850 PF04073 Aminoacyl-tRNA editing domain D9C11_20850 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) D9C11_20850 PF03129 Anticodon binding domain D9C11_20855 PF02811 PHP domain D9C11_20855 PF00929 Exonuclease D9C11_20855 PF14579 Helix-hairpin-helix motif D9C11_20855 PF14480 DNA polymerase III polC-type N-terminus I D9C11_20855 PF11490 DNA polymerase III polC-type N-terminus II D9C11_20855 PF17657 Bacterial DNA polymerase III alpha subunit finger domain D9C11_20855 PF07733 Bacterial DNA polymerase III alpha NTPase domain D9C11_20860 PF02576 RimP N-terminal domain D9C11_20860 PF17384 RimP C-terminal SH3 domain D9C11_20865 PF08529 NusA N-terminal domain D9C11_20865 PF00575 S1 RNA binding domain D9C11_20865 PF13184 NusA-like KH domain D9C11_20870 PF04296 Protein of unknown function (DUF448) D9C11_20875 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family D9C11_20880 PF04760 Translation initiation factor IF-2, N-terminal region D9C11_20880 PF11987 Translation-initiation factor 2 D9C11_20880 PF00009 Elongation factor Tu GTP binding domain D9C11_20885 PF04456 Protein of unknown function (DUF503) D9C11_20890 PF02033 Ribosome-binding factor A D9C11_20895 PF16198 tRNA pseudouridylate synthase B C-terminal domain D9C11_20895 PF01509 TruB family pseudouridylate synthase (N terminal domain) D9C11_20900 PF06574 FAD synthetase D9C11_20900 PF01687 Riboflavin kinase D9C11_20905 PF00312 Ribosomal protein S15 D9C11_20910 PF00575 S1 RNA binding domain D9C11_20910 PF03725 3' exoribonuclease family, domain 2 D9C11_20910 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain D9C11_20910 PF00013 KH domain D9C11_20910 PF01138 3' exoribonuclease family, domain 1 D9C11_20915 PF01522 Polysaccharide deacetylase D9C11_20920 PF05193 Peptidase M16 inactive domain D9C11_20920 PF00675 Insulinase (Peptidase family M16) D9C11_20925 PF05239 PRC-barrel domain D9C11_20930 PF01262 Alanine dehydrogenase/PNT, C-terminal domain D9C11_20930 PF16924 Dipicolinate synthase subunit A N-terminal domain D9C11_20935 PF02441 Flavoprotein D9C11_20940 PF01118 Semialdehyde dehydrogenase, NAD binding domain D9C11_20940 PF02774 Semialdehyde dehydrogenase, dimerisation domain D9C11_20945 PF13840 ACT domain D9C11_20945 PF00696 Amino acid kinase family D9C11_20950 PF00701 Dihydrodipicolinate synthetase family D9C11_20955 PF17770 Ribonuclease J C-terminal domain D9C11_20955 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain D9C11_20955 PF00753 Metallo-beta-lactamase superfamily D9C11_20960 PF00574 Clp protease D9C11_20965 PF14035 YlzJ-like protein D9C11_20970 PF09397 Ftsk gamma domain D9C11_20970 PF17854 FtsK alpha domain D9C11_20970 PF01580 FtsK/SpoIIIE family D9C11_20975 PF07702 UTRA domain D9C11_20975 PF00392 Bacterial regulatory proteins, gntR family D9C11_20980 PF07690 Major Facilitator Superfamily D9C11_20985 PF05193 Peptidase M16 inactive domain D9C11_20990 PF05193 Peptidase M16 inactive domain D9C11_20990 PF00675 Insulinase (Peptidase family M16) D9C11_21000 PF11588 Protein of unknown function (DUF3243) D9C11_21005 PF11868 Protein of unknown function (DUF3388) D9C11_21010 PF13464 Domain of unknown function (DUF4115) D9C11_21015 PF01066 CDP-alcohol phosphatidyltransferase D9C11_21020 PF02464 Competence-damaged protein D9C11_21020 PF00994 Probable molybdopterin binding domain D9C11_21020 PF18146 Damage-inducible protein CinA KH domain D9C11_21025 PF00154 recA bacterial DNA recombination protein D9C11_21030 PF00144 Beta-lactamase D9C11_21035 PF12072 Domain of unknown function (DUF3552) D9C11_21035 PF00013 KH domain D9C11_21035 PF01966 HD domain D9C11_21040 PF13277 YmdB-like protein D9C11_21045 PF04232 Stage V sporulation protein S (SpoVS) D9C11_21050 PF00107 Zinc-binding dehydrogenase D9C11_21050 PF08240 Alcohol dehydrogenase GroES-like domain D9C11_21055 PF00155 Aminotransferase class I and II D9C11_21060 PF01938 TRAM domain D9C11_21060 PF00919 Uncharacterized protein family UPF0004 D9C11_21060 PF04055 Radical SAM superfamily D9C11_21065 PF06133 Control of competence regulator ComK, YlbF/YmcA D9C11_21070 PF10628 Outer spore coat protein E (CotE) D9C11_21075 PF01624 MutS domain I D9C11_21075 PF05190 MutS family domain IV D9C11_21075 PF00488 MutS domain V D9C11_21075 PF05192 MutS domain III D9C11_21075 PF05188 MutS domain II D9C11_21080 PF08676 MutL C terminal dimerisation domain D9C11_21080 PF01119 DNA mismatch repair protein, C-terminal domain D9C11_21085 PF14184 Regulatory protein YrvL D9C11_21095 PF13977 BetI-type transcriptional repressor, C-terminal D9C11_21095 PF00440 Bacterial regulatory proteins, tetR family D9C11_21110 PF00082 Subtilase family D9C11_21120 PF05908 Poly-gamma-glutamate hydrolase D9C11_21125 PF02566 OsmC-like protein D9C11_21130 PF00893 Small Multidrug Resistance protein D9C11_21135 PF00893 Small Multidrug Resistance protein D9C11_21145 PF12788 YmaF family D9C11_21155 PF17209 Hfq protein D9C11_21160 PF14157 YmzC-like protein D9C11_21170 PF07972 NrdI Flavodoxin like D9C11_21175 PF08343 Ribonucleotide reductase N-terminal D9C11_21175 PF02867 Ribonucleotide reductase, barrel domain D9C11_21175 PF00317 Ribonucleotide reductase, all-alpha domain D9C11_21180 PF00268 Ribonucleotide reductase, small chain D9C11_21190 PF05036 Sporulation related domain D9C11_21190 PF01520 N-acetylmuramoyl-L-alanine amidase D9C11_21200 PF00004 ATPase family associated with various cellular activities (AAA) D9C11_21200 PF17866 AAA lid domain D9C11_21205 PF16360 GTP-binding GTPase Middle Region D9C11_21205 PF13167 GTP-binding GTPase N-terminal D9C11_21205 PF01926 50S ribosome-binding GTPase D9C11_21210 PF06838 Methionine gamma-lyase D9C11_21215 PF13411 MerR HTH family regulatory protein D9C11_21220 PF03951 Glutamine synthetase, beta-Grasp domain D9C11_21220 PF00120 Glutamine synthetase, catalytic domain D9C11_21225 PF14659 Phage integrase, N-terminal SAM-like domain D9C11_21225 PF00589 Phage integrase family D9C11_21235 PF00872 Transposase, Mutator family D9C11_21240 PF05901 Excalibur calcium-binding domain D9C11_21240 PF00565 Staphylococcal nuclease homologue D9C11_21245 PF15652 HNH/Endo VII superfamily toxin with a SHH signature D9C11_21245 PF04740 LXG domain of WXG superfamily D9C11_21260 PF13302 Acetyltransferase (GNAT) domain D9C11_21265 PF01609 Transposase DDE domain D9C11_21275 PF18801 response regulator aspartate phosphatase H, N terminal D9C11_21290 PF01510 N-acetylmuramoyl-L-alanine amidase D9C11_21305 PF06605 Prophage endopeptidase tail D9C11_21310 PF05709 Phage tail protein D9C11_21335 PF13495 Phage integrase, N-terminal SAM-like domain D9C11_21335 PF00589 Phage integrase family D9C11_21350 PF09693 Phage uncharacterised protein (Phage_XkdX) D9C11_21455 PF09642 YonK protein D9C11_21460 PF00216 Bacterial DNA-binding protein D9C11_21515 PF00580 UvrD/REP helicase N-terminal domain D9C11_21515 PF13361 UvrD-like helicase C-terminal domain D9C11_21570 PF01609 Transposase DDE domain D9C11_21600 PF14072 DNA-sulfur modification-associated D9C11_21610 PF13443 Cro/C1-type HTH DNA-binding domain D9C11_21635 PF09643 YopX protein D9C11_21670 PF14037 YoqO-like protein D9C11_21680 PF09669 Phage regulatory protein Rha (Phage_pRha) D9C11_21680 PF03374 Phage antirepressor protein KilAC domain D9C11_21725 PF13392 HNH endonuclease D9C11_21735 PF00085 Thioredoxin D9C11_21740 PF00692 dUTPase D9C11_21780 PF00303 Thymidylate synthase D9C11_21790 PF00269 Small, acid-soluble spore proteins, alpha/beta type D9C11_21840 PF13443 Cro/C1-type HTH DNA-binding domain D9C11_21855 PF08485 Polysaccharide biosynthesis protein C-terminal D9C11_21855 PF02719 Polysaccharide biosynthesis protein D9C11_21860 PF02333 Phytase D9C11_21865 PF12996 DUF based on E. rectale Gene description (DUF3880) D9C11_21880 PF00583 Acetyltransferase (GNAT) family D9C11_21900 PF00202 Aminotransferase class-III D9C11_21905 PF01144 Coenzyme A transferase D9C11_21915 PF01546 Peptidase family M20/M25/M40 D9C11_21915 PF07687 Peptidase dimerisation domain D9C11_21920 PF00583 Acetyltransferase (GNAT) family D9C11_21925 PF12544 Lysine-2,3-aminomutase D9C11_21940 PF00665 Integrase core domain D9C11_21945 PF01695 IstB-like ATP binding protein D9C11_21970 PF10903 Protein of unknown function (DUF2691) D9C11_21975 PF00692 dUTPase D9C11_21985 PF00303 Thymidylate synthase D9C11_22000 PF14037 YoqO-like protein D9C11_22010 PF02416 mttA/Hcf106 family D9C11_22025 PF08327 Activator of Hsp90 ATPase homolog 1-like protein D9C11_22050 PF13761 Domain of unknown function (DUF4166) D9C11_22065 PF05908 Poly-gamma-glutamate hydrolase D9C11_22070 PF10710 Protein of unknown function (DUF2512) D9C11_22075 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily D9C11_22085 PF01726 LexA DNA binding domain D9C11_22085 PF00717 Peptidase S24-like D9C11_22090 PF01476 LysM domain D9C11_22095 PF00239 Resolvase, N terminal domain D9C11_22100 PF05979 Bacterial protein of unknown function (DUF896) D9C11_22105 PF02780 Transketolase, C-terminal domain D9C11_22105 PF00456 Transketolase, thiamine diphosphate binding domain D9C11_22105 PF02779 Transketolase, pyrimidine binding domain D9C11_22110 PF10747 Sporulation inhibitor of replication protein SirA D9C11_22115 PF03672 Uncharacterised protein family (UPF0154) D9C11_22120 PF09388 Spo0E like sporulation regulatory protein D9C11_22125 PF02683 Cytochrome C biogenesis protein transmembrane region D9C11_22130 PF00072 Response regulator receiver domain D9C11_22135 PF07301 Protein of unknown function (DUF1453) D9C11_22140 PF11084 Protein of unknown function (DUF2621) D9C11_22150 PF08179 Small acid-soluble spore protein P family D9C11_22160 PF00694 Aconitase C-terminal domain D9C11_22160 PF00330 Aconitase family (aconitate hydratase) D9C11_22165 PF00578 AhpC/TSA family D9C11_22170 PF13040 Fur-regulated basic protein B D9C11_22175 PF08177 Small acid-soluble spore protein N family D9C11_22185 PF03061 Thioesterase superfamily D9C11_22195 PF01521 Iron-sulphur cluster biosynthesis D9C11_22200 PF02660 Glycerol-3-phosphate acyltransferase D9C11_22205 PF13380 CoA binding domain D9C11_22210 PF00986 DNA gyrase B subunit, carboxyl terminus D9C11_22210 PF00204 DNA gyrase B D9C11_22210 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D9C11_22210 PF01751 Toprim domain D9C11_22215 PF00521 DNA gyrase/topoisomerase IV, subunit A D9C11_22215 PF03989 DNA gyrase C-terminal domain, beta-propeller D9C11_22225 PF01235 Sodium:alanine symporter family D9C11_22230 PF00942 Cellulose binding domain D9C11_22230 PF00150 Cellulase (glycosyl hydrolase family 5) D9C11_22235 PF17452 Uncharacterized YnfE-like D9C11_22250 PF04138 GtrA-like protein D9C11_22255 PF00483 Nucleotidyl transferase D9C11_22260 PF09335 SNARE associated Golgi protein D9C11_22270 PF01039 Carboxyl transferase domain D9C11_22275 PF00378 Enoyl-CoA hydratase/isomerase D9C11_22280 PF00682 HMGL-like D9C11_22285 PF00364 Biotin-requiring enzyme D9C11_22290 PF02785 Biotin carboxylase C-terminal domain D9C11_22290 PF00289 Biotin carboxylase, N-terminal domain D9C11_22290 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain D9C11_22295 PF00501 AMP-binding enzyme D9C11_22295 PF13193 AMP-binding enzyme C-terminal domain D9C11_22300 PF02771 Acyl-CoA dehydrogenase, N-terminal domain D9C11_22300 PF02770 Acyl-CoA dehydrogenase, middle domain D9C11_22300 PF00441 Acyl-CoA dehydrogenase, C-terminal domain D9C11_22305 PF17329 Family of unknown function (DUF5367) D9C11_22320 PF07098 Protein of unknown function (DUF1360) D9C11_22335 PF00550 Phosphopantetheine attachment site D9C11_22335 PF00668 Condensation domain D9C11_22335 PF13193 AMP-binding enzyme C-terminal domain D9C11_22335 PF00501 AMP-binding enzyme D9C11_22340 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family D9C11_22345 PF01263 Aldose 1-epimerase D9C11_22350 PF01554 MatE D9C11_22355 PF16800 IseA DL-endopeptidase inhibitor D9C11_22365 PF00589 Phage integrase family D9C11_22370 PF12728 Helix-turn-helix domain D9C11_22385 PF07992 Pyridine nucleotide-disulphide oxidoreductase D9C11_22385 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster D9C11_22390 PF04898 Glutamate synthase central domain D9C11_22390 PF01645 Conserved region in glutamate synthase D9C11_22390 PF00310 Glutamine amidotransferases class-II D9C11_22390 PF01493 GXGXG motif D9C11_22395 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D9C11_22395 PF03466 LysR substrate binding domain D9C11_22400 PF00696 Amino acid kinase family D9C11_22400 PF01472 PUA domain D9C11_22405 PF14748 Pyrroline-5-carboxylate reductase dimerisation D9C11_22405 PF03807 NADP oxidoreductase coenzyme F420-dependent D9C11_22410 PF02334 Replication terminator protein D9C11_22415 PF00106 short chain dehydrogenase D9C11_22420 PF06103 Bacterial protein of unknown function (DUF948) D9C11_22430 PF13302 Acetyltransferase (GNAT) domain D9C11_22445 PF00005 ABC transporter D9C11_22455 PF07690 Major Facilitator Superfamily D9C11_22465 PF04239 Protein of unknown function (DUF421) D9C11_22470 PF13091 PLD-like domain D9C11_22470 PF13396 Phospholipase_D-nuclease N-terminal D9C11_22480 PF04239 Protein of unknown function (DUF421) D9C11_22490 PF03862 SpoVAC/SpoVAEB sporulation membrane protein D9C11_22495 PF07451 Stage V sporulation protein AD (SpoVAD) D9C11_22500 PF03862 SpoVAC/SpoVAEB sporulation membrane protein D9C11_22515 PF05067 Manganese containing catalase D9C11_22530 PF03323 Bacillus/Clostridium GerA spore germination protein D9C11_22535 PF01520 N-acetylmuramoyl-L-alanine amidase D9C11_22535 PF05036 Sporulation related domain D9C11_22550 PF00672 HAMP domain D9C11_22550 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain D9C11_22550 PF05227 CHASE3 domain D9C11_22555 PF11794 4-hydroxyphenylacetate 3-hydroxylase N terminal D9C11_22555 PF03241 4-hydroxyphenylacetate 3-hydroxylase C terminal D9C11_22560 PF03330 Lytic transglycolase D9C11_22565 PF06912 Protein of unknown function (DUF1275) D9C11_22575 PF01609 Transposase DDE domain D9C11_22625 PF04294 VanW like protein D9C11_22630 PF11188 Protein of unknown function (DUF2975) D9C11_22635 PF13443 Cro/C1-type HTH DNA-binding domain D9C11_22680 PF09346 SMI1 / KNR4 family (SUKH-1) D9C11_22685 PF04740 LXG domain of WXG superfamily D9C11_22685 PF15652 HNH/Endo VII superfamily toxin with a SHH signature D9C11_22690 PF09346 SMI1 / KNR4 family (SUKH-1) D9C11_22695 PF01593 Flavin containing amine oxidoreductase D9C11_22700 PF01588 Putative tRNA binding domain D9C11_22705 PF12833 Helix-turn-helix domain D9C11_22705 PF07883 Cupin domain D9C11_22710 PF00583 Acetyltransferase (GNAT) family D9C11_22715 PF13305 Tetracyclin repressor-like, C-terminal domain D9C11_22715 PF00440 Bacterial regulatory proteins, tetR family D9C11_22720 PF00753 Metallo-beta-lactamase superfamily D9C11_22725 PF06445 GyrI-like small molecule binding domain D9C11_22730 PF08279 HTH domain D9C11_22730 PF13280 WYL domain D9C11_22740 PF01022 Bacterial regulatory protein, arsR family D9C11_22750 PF04238 Protein of unknown function (DUF420) D9C11_22755 PF18846 Bacterial archaeo-eukaryotic release factor family 5 D9C11_22765 PF02016 LD-carboxypeptidase N-terminal domain D9C11_22765 PF17676 LD-carboxypeptidase C-terminal domain D9C11_22770 PF00487 Fatty acid desaturase D9C11_22775 PF07730 Histidine kinase D9C11_22780 PF00196 Bacterial regulatory proteins, luxR family D9C11_22780 PF00072 Response regulator receiver domain D9C11_22785 PF06725 3D domain D9C11_22785 PF01476 LysM domain D9C11_22790 PF00271 Helicase conserved C-terminal domain D9C11_22790 PF00270 DEAD/DEAH box helicase D9C11_22790 PF16124 RecQ zinc-binding D9C11_22790 PF09382 RQC domain D9C11_22790 PF00570 HRDC domain D9C11_22805 PF02525 Flavodoxin-like fold D9C11_22810 PF01258 Prokaryotic dksA/traR C4-type zinc finger D9C11_22825 PF00011 Hsp20/alpha crystallin family D9C11_22840 PF08000 Bacterial PH domain D9C11_22850 PF00171 Aldehyde dehydrogenase family D9C11_22860 PF02777 Iron/manganese superoxide dismutases, C-terminal domain D9C11_22860 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain D9C11_22865 PF00209 Sodium:neurotransmitter symporter family D9C11_22870 PF01758 Sodium Bile acid symporter family D9C11_22875 PF00364 Biotin-requiring enzyme D9C11_22875 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) D9C11_22875 PF02817 e3 binding domain D9C11_22880 PF00676 Dehydrogenase E1 component D9C11_22880 PF16870 2-oxoglutarate dehydrogenase C-terminal D9C11_22880 PF02779 Transketolase, pyrimidine binding domain D9C11_22885 PF00092 von Willebrand factor type A domain D9C11_22890 PF07728 AAA domain (dynein-related subfamily) D9C11_22895 PF00080 Copper/zinc superoxide dismutase (SODC) D9C11_22895 PF13627 Prokaryotic lipoprotein-attachment site D9C11_22900 PF00877 NlpC/P60 family D9C11_22900 PF01476 LysM domain D9C11_22905 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase D9C11_22910 PF10372 Bacterial membrane-spanning protein N-terminus D9C11_22910 PF02457 DisA bacterial checkpoint controller nucleotide-binding D9C11_22915 PF01554 MatE D9C11_22925 PF18801 response regulator aspartate phosphatase H, N terminal D9C11_22935 PF01471 Putative peptidoglycan binding domain D9C11_22935 PF01510 N-acetylmuramoyl-L-alanine amidase D9C11_22940 PF01510 N-acetylmuramoyl-L-alanine amidase D9C11_22945 PF04688 SPP1 phage holin D9C11_22950 PF10960 BhlA holin family D9C11_22990 PF01464 Transglycosylase SLT domain D9C11_23030 PF00574 Clp protease D9C11_23080 PF08281 Sigma-70, region 4 D9C11_23100 PF03796 DnaB-like helicase C terminal domain D9C11_23100 PF00772 DnaB-like helicase N terminal domain D9C11_23125 PF03374 Phage antirepressor protein KilAC domain D9C11_23125 PF09669 Phage regulatory protein Rha (Phage_pRha) D9C11_23165 PF00589 Phage integrase family D9C11_23165 PF14659 Phage integrase, N-terminal SAM-like domain D9C11_23175 PF02585 GlcNAc-PI de-N-acetylase D9C11_23180 PF08830 Protein of unknown function (DUF1806) D9C11_23190 PF00892 EamA-like transporter family D9C11_23210 PF14552 Tautomerase enzyme D9C11_23215 PF01638 HxlR-like helix-turn-helix D9C11_23220 PF00881 Nitroreductase family D9C11_23225 PF01738 Dienelactone hydrolase family D9C11_23230 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily D9C11_23235 PF11755 Protein of unknown function (DUF3311) D9C11_23240 PF00474 Sodium:solute symporter family D9C11_23245 PF17820 PDZ domain D9C11_23245 PF01471 Putative peptidoglycan binding domain D9C11_23245 PF03572 Peptidase family S41 D9C11_23250 PF08241 Methyltransferase domain D9C11_23330 PF00589 Phage integrase family D9C11_23375 PF01068 ATP dependent DNA ligase domain D9C11_23410 PF13154 Protein of unknown function (DUF3991) D9C11_23440 PF00877 NlpC/P60 family D9C11_23490 PF00437 Type II/IV secretion system protein D9C11_23545 PF01381 Helix-turn-helix D9C11_23555 PF00512 His Kinase A (phospho-acceptor) domain D9C11_23555 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D9C11_23580 PF02661 Fic/DOC family D9C11_23595 PF17841 BID domain of Bartonella effector protein (Bep) D9C11_23595 PF01443 Viral (Superfamily 1) RNA helicase D9C11_23595 PF03389 MobA/MobL family