S100333_00001 SM00382 ATPases associated with a variety of cellular activities S100333_00001 SM00760 Bacterial dnaA protein helix-turn-helix domain S100333_00002 SM00480 DNA polymerase III beta subunit S100333_00006 SM00387 Histidine kinase-like ATPases S100333_00006 SM00433 TopoisomeraseII S100333_00007 SM00434 DNA Topoisomerase IV S100333_00014 SM00116 Domain in cystathionine beta-synthase and other proteins. S100333_00014 SM01240 S100333_00014 S100333_00015 SM00936 Penicillin-binding protein 5, C-terminal domain S100333_00022 SM00257 Lysin motif S100333_00022 SM00636 S100333_00022 S100333_00025 SM00382 ATPases associated with a variety of cellular activities S100333_00027 SM00493 S100333_00027 S100333_00046 SM00465 GIY-YIG type nucleases (URI domain) S100333_00050 SM00966 SpoVT / AbrB like domain S100333_00053 SM01208 S100333_00053 S100333_00054 SM00493 S100333_00054 S100333_00055 SM00650 Ribosomal RNA adenine dimethylases S100333_00064 SM01400 S100333_00064 S100333_00068 SM00487 DEAD-like helicases superfamily S100333_00068 SM00490 helicase superfamily c-terminal domain S100333_00068 SM00982 S100333_00068 S100333_00068 SM01058 CarD-like/TRCF domain S100333_00069 SM00966 SpoVT / AbrB like domain S100333_00072 SM00363 S4 RNA-binding domain S100333_00076 SM00316 Ribosomal protein S1-like RNA-binding domain S100333_00079 SM00331 Sigma factor PP2C-like phosphatases S100333_00079 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain S100333_00081 SM00220 Serine/Threonine protein kinases, catalytic domain S100333_00082 SM00977 TilS substrate C-terminal domain S100333_00084 SM00382 ATPases associated with a variety of cellular activities S100333_00093 SM00905 Dihydroneopterin aldolase S100333_00095 SM00530 Helix-turn-helix XRE-family like proteins S100333_00116 SM00382 ATPases associated with a variety of cellular activities S100333_00116 SM01086 C-terminal, D2-small domain, of ClpB protein S100333_00117 SM00382 ATPases associated with a variety of cellular activities S100333_00119 SM00670 Large family of predicted nucleotide-binding domains S100333_00124 SM00840 S100333_00124 S100333_00125 SM00535 Ribonuclease III family S100333_00126 SM00967 RNA 2'-O ribose methyltransferase substrate binding S100333_00130 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. S100333_00130 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. S100333_00131 SM00649 Ribosomal protein L11/L12 S100333_00137 SM00663 RNA polymerase I subunit A N-terminus S100333_00141 SM00838 Elongation factor G C-terminus S100333_00141 SM00889 Elongation factor G, domain IV S100333_00144 SM01403 S100333_00144 S100333_00148 SM01382 S100333_00148 S100333_00148 SM01383 S100333_00148 S100333_00151 SM00322 K homology RNA-binding domain S100333_00155 SM01374 S100333_00155 S100333_00156 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. S100333_00168 SM00316 Ribosomal protein S1-like RNA-binding domain S100333_00172 SM00662 RNA polymerases D S100333_00174 SM00382 ATPases associated with a variety of cellular activities S100333_00175 SM00382 ATPases associated with a variety of cellular activities S100333_00182 SM00646 S100333_00182 S100333_00185 SM01251 S100333_00185 S100333_00210 SM00342 helix_turn_helix, arabinose operon control protein S100333_00233 SM00342 helix_turn_helix, arabinose operon control protein S100333_00241 SM00862 Transcriptional regulatory protein, C terminal S100333_00242 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain S100333_00242 SM00388 His Kinase A (phosphoacceptor) domain S100333_00259 SM00347 helix_turn_helix multiple antibiotic resistance protein S100333_00266 SM00342 helix_turn_helix, arabinose operon control protein S100333_00269 SM00257 Lysin motif S100333_00280 SM00450 Rhodanese Homology Domain S100333_00284 SM00345 helix_turn_helix gluconate operon transcriptional repressor S100333_00284 SM00866 S100333_00284 S100333_00293 SM00387 Histidine kinase-like ATPases S100333_00294 SM00448 cheY-homologous receiver domain S100333_00296 SM01130 S100333_00296 S100333_00299 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain S100333_00300 SM00345 helix_turn_helix gluconate operon transcriptional repressor S100333_00300 SM00895 S100333_00300 S100333_00301 SM00858 S100333_00301 S100333_00305 SM00448 cheY-homologous receiver domain S100333_00305 SM00862 Transcriptional regulatory protein, C terminal S100333_00306 SM00387 Histidine kinase-like ATPases S100333_00306 SM00388 His Kinase A (phosphoacceptor) domain S100333_00307 SM00382 ATPases associated with a variety of cellular activities S100333_00311 SM00327 von Willebrand factor (vWF) type A domain S100333_00319 SM00870 S100333_00319 S100333_00323 SM00387 Histidine kinase-like ATPases S100333_00324 SM00448 cheY-homologous receiver domain S100333_00324 SM00850 LytTr DNA-binding domain S100333_00325 SM00382 ATPases associated with a variety of cellular activities S100333_00332 SM00028 Tetratricopeptide repeats S100333_00336 SM00642 Alpha-amylase domain S100333_00338 SM00382 ATPases associated with a variety of cellular activities S100333_00351 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor S100333_00352 SM00116 Domain in cystathionine beta-synthase and other proteins. S100333_00352 SM00382 ATPases associated with a variety of cellular activities S100333_00358 SM00632 S100333_00358 S100333_00358 SM00642 Alpha-amylase domain S100333_00386 SM00926 Molybdopterin oxidoreductase Fe4S4 domain S100333_00392 SM00833 Cobalamin synthesis protein cobW C-terminal domain S100333_00394 SM00062 Bacterial periplasmic substrate-binding proteins S100333_00399 SM00347 helix_turn_helix multiple antibiotic resistance protein S100333_00401 SM00382 ATPases associated with a variety of cellular activities S100333_00408 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). S100333_00409 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain S100333_00411 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family S100333_00413 SM00823 Phosphopantetheine attachment site S100333_00413 SM01294 S100333_00413 S100333_00414 SM00823 Phosphopantetheine attachment site S100333_00414 SM01294 S100333_00414 S100333_00415 SM00823 Phosphopantetheine attachment site S100333_00420 SM00345 helix_turn_helix gluconate operon transcriptional repressor S100333_00423 SM00382 ATPases associated with a variety of cellular activities S100333_00425 SM00062 Bacterial periplasmic substrate-binding proteins S100333_00430 SM00710 Parallel beta-helix repeats S100333_00430 SM00722 Domain present in carbohydrate binding proteins and sugar hydrolses S100333_00435 SM00382 ATPases associated with a variety of cellular activities S100333_00438 SM00448 cheY-homologous receiver domain S100333_00439 SM00862 Transcriptional regulatory protein, C terminal S100333_00440 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain S100333_00440 SM00387 Histidine kinase-like ATPases S100333_00440 SM00388 His Kinase A (phosphoacceptor) domain S100333_00441 SM00028 Tetratricopeptide repeats S100333_00449 SM00382 ATPases associated with a variety of cellular activities S100333_00457 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor S100333_00458 SM00345 helix_turn_helix gluconate operon transcriptional repressor S100333_00466 SM00420 helix_turn_helix, Deoxyribose operon repressor S100333_00471 SM01329 S100333_00471 S100333_00481 SM00796 Allophanate hydrolase subunit 1 S100333_00482 SM00797 Allophanate hydrolase subunit 2 S100333_00483 SM00346 helix_turn_helix isocitrate lyase regulation S100333_00498 SM00344 helix_turn_helix ASNC type S100333_00499 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain S100333_00499 SM00437 Bacterial DNA topoisomerase I DNA-binding domain S100333_00499 SM00493 S100333_00499 S100333_00503 SM00752 Horizontally Transferred TransMembrane Domain S100333_00515 SM00091 PAS domain S100333_00515 SM00387 Histidine kinase-like ATPases S100333_00516 SM00448 cheY-homologous receiver domain S100333_00520 SM00382 ATPases associated with a variety of cellular activities S100333_00531 SM00487 DEAD-like helicases superfamily S100333_00531 SM00490 helicase superfamily c-terminal domain S100333_00537 SM01005 Alanine racemase, C-terminal domain S100333_00542 SM00387 Histidine kinase-like ATPases S100333_00543 SM00331 Sigma factor PP2C-like phosphatases S100333_00547 SM00331 Sigma factor PP2C-like phosphatases S100333_00547 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain S100333_00548 SM00316 Ribosomal protein S1-like RNA-binding domain S100333_00548 SM00732 Likely ribonuclease with RNase H fold. S100333_00549 SM00731 SprT homologues. S100333_00563 SM00382 ATPases associated with a variety of cellular activities S100333_00565 SM00530 Helix-turn-helix XRE-family like proteins S100333_00571 SM00357 Cold shock protein domain S100333_00572 SM01058 CarD-like/TRCF domain S100333_00575 SM00342 helix_turn_helix, arabinose operon control protein S100333_00577 SM00342 helix_turn_helix, arabinose operon control protein S100333_00577 SM00871 Bacterial transcription activator, effector binding domain S100333_00578 SM00345 helix_turn_helix gluconate operon transcriptional repressor S100333_00589 SM00345 helix_turn_helix gluconate operon transcriptional repressor S100333_00594 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor S100333_00598 SM00345 helix_turn_helix gluconate operon transcriptional repressor S100333_00601 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor S100333_00603 SM00421 helix_turn_helix, Lux Regulon S100333_00603 SM00448 cheY-homologous receiver domain S100333_00607 SM00422 helix_turn_helix, mercury resistance S100333_00607 SM00871 Bacterial transcription activator, effector binding domain S100333_00624 SM00382 ATPases associated with a variety of cellular activities S100333_00627 SM00347 helix_turn_helix multiple antibiotic resistance protein S100333_00630 SM00347 helix_turn_helix multiple antibiotic resistance protein S100333_00630 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor S100333_00633 SM00345 helix_turn_helix gluconate operon transcriptional repressor S100333_00633 SM00895 S100333_00633 S100333_00634 SM00257 Lysin motif S100333_00634 SM00636 S100333_00634 S100333_00637 SM00098 Alkaline phosphatase homologues S100333_00641 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. S100333_00649 SM00345 helix_turn_helix gluconate operon transcriptional repressor S100333_00649 SM00866 S100333_00649 S100333_00667 SM00382 ATPases associated with a variety of cellular activities S100333_00669 SM00881 CoA binding domain S100333_00674 SM00883 Chaperonin 10 Kd subunit S100333_00676 SM00448 cheY-homologous receiver domain S100333_00676 SM00850 LytTr DNA-binding domain S100333_00677 SM00793 Accessory gene regulator B S100333_00678 SM00387 Histidine kinase-like ATPases S100333_00680 SM01260 S100333_00680 S100333_00683 SM01260 S100333_00683 S100333_00684 SM00382 ATPases associated with a variety of cellular activities S100333_00686 SM00382 ATPases associated with a variety of cellular activities S100333_00689 SM00530 Helix-turn-helix XRE-family like proteins S100333_00690 SM00382 ATPases associated with a variety of cellular activities S100333_00693 SM00028 Tetratricopeptide repeats S100333_00694 SM00382 ATPases associated with a variety of cellular activities S100333_00695 SM00829 Enoylreductase S100333_00706 SM00829 Enoylreductase S100333_00719 SM00460 Transglutaminase/protease-like homologues S100333_00728 SM01001 AIR carboxylase S100333_00730 SM00998 Adenylosuccinate lyase C-terminus S100333_00733 SM01211 S100333_00733 S100333_00738 SM00798 AICARFT/IMPCHase bienzyme S100333_00738 SM00851 MGS-like domain S100333_00739 SM01209 S100333_00739 S100333_00739 SM01210 S100333_00739 S100333_00740 SM00344 helix_turn_helix ASNC type S100333_00750 SM00278 Helix-hairpin-helix DNA-binding motif class 1 S100333_00750 SM00292 breast cancer carboxy-terminal domain S100333_00750 SM00532 Ligase N family S100333_00759 SM00845 GatB domain S100333_00762 SM00046 Diacylglycerol kinase catalytic domain (presumed) S100333_00768 SM00530 Helix-turn-helix XRE-family like proteins S100333_00781 SM00028 Tetratricopeptide repeats S100333_00791 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain S100333_00791 SM00387 Histidine kinase-like ATPases S100333_00792 SM00448 cheY-homologous receiver domain S100333_00835 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). S100333_00836 SM00382 ATPases associated with a variety of cellular activities S100333_00838 SM00422 helix_turn_helix, mercury resistance S100333_00843 SM00382 ATPases associated with a variety of cellular activities S100333_00844 SM00487 DEAD-like helicases superfamily S100333_00844 SM00490 helicase superfamily c-terminal domain S100333_00847 SM00829 Enoylreductase S100333_00848 SM00382 ATPases associated with a variety of cellular activities S100333_00854 SM00656 S100333_00854 S100333_00856 SM00387 Histidine kinase-like ATPases S100333_00857 SM00448 cheY-homologous receiver domain S100333_00860 SM00849 Metallo-beta-lactamase superfamily S100333_00874 SM00642 Alpha-amylase domain S100333_00875 SM00345 helix_turn_helix gluconate operon transcriptional repressor S100333_00875 SM00866 S100333_00875 S100333_00881 SM00226 Low molecular weight phosphatase family S100333_00893 SM00478 endonuclease III S100333_00900 SM00861 Transketolase, pyrimidine binding domain S100333_00904 SM00382 ATPases associated with a variety of cellular activities S100333_00917 SM00382 ATPases associated with a variety of cellular activities S100333_00918 SM00382 ATPases associated with a variety of cellular activities S100333_00921 SM00342 helix_turn_helix, arabinose operon control protein S100333_00927 SM00387 Histidine kinase-like ATPases S100333_00928 SM00421 helix_turn_helix, Lux Regulon S100333_00928 SM00448 cheY-homologous receiver domain S100333_00929 SM00382 ATPases associated with a variety of cellular activities S100333_00940 SM00347 helix_turn_helix multiple antibiotic resistance protein S100333_00958 SM00287 Bacterial SH3 domain homologues S100333_00964 SM00478 endonuclease III S100333_00964 SM00525 S100333_00964 S100333_00970 SM00382 ATPases associated with a variety of cellular activities S100333_01002 SM01060 S100333_01002 S100333_01003 SM00382 ATPases associated with a variety of cellular activities S100333_01004 SM00062 Bacterial periplasmic substrate-binding proteins S100333_01009 SM00530 Helix-turn-helix XRE-family like proteins S100333_01012 SM00567 E-Z type HEAT repeats S100333_01018 SM00763 PrkA AAA domain S100333_01020 SM00347 helix_turn_helix multiple antibiotic resistance protein S100333_01026 SM00345 helix_turn_helix gluconate operon transcriptional repressor S100333_01027 SM00382 ATPases associated with a variety of cellular activities S100333_01028 SM00382 ATPases associated with a variety of cellular activities S100333_01030 SM00357 Cold shock protein domain S100333_01032 SM00267 diguanylate cyclase S100333_01044 SM00530 Helix-turn-helix XRE-family like proteins S100333_01057 SM00028 Tetratricopeptide repeats S100333_01063 SM00318 Staphylococcal nuclease homologues S100333_01065 SM00363 S4 RNA-binding domain S100333_01067 SM00116 Domain in cystathionine beta-synthase and other proteins. S100333_01076 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. S100333_01076 SM00387 Histidine kinase-like ATPases S100333_01077 SM00421 helix_turn_helix, Lux Regulon S100333_01077 SM00448 cheY-homologous receiver domain S100333_01081 SM00257 Lysin motif S100333_01085 SM00098 Alkaline phosphatase homologues S100333_01086 SM00257 Lysin motif S100333_01092 SM00345 helix_turn_helix gluconate operon transcriptional repressor S100333_01098 SM00563 Phosphate acyltransferases S100333_01099 SM01091 Transporter associated domain S100333_01100 SM00422 helix_turn_helix, mercury resistance S100333_01103 SM01091 Transporter associated domain S100333_01114 SM00382 ATPases associated with a variety of cellular activities S100333_01115 SM00382 ATPases associated with a variety of cellular activities S100333_01125 SM00729 Elongator protein 3, MiaB family, Radical SAM S100333_01131 SM00382 ATPases associated with a variety of cellular activities S100333_01135 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. S100333_01140 SM00347 helix_turn_helix multiple antibiotic resistance protein S100333_01146 SM00382 ATPases associated with a variety of cellular activities S100333_01162 SM01022 S100333_01162 S100333_01164 SM00849 Metallo-beta-lactamase superfamily S100333_01172 SM00829 Enoylreductase S100333_01174 SM00855 Phosphoglycerate mutase family S100333_01178 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). S100333_01183 SM00914 S100333_01183 S100333_01187 SM00894 Excalibur calcium-binding domain S100333_01195 SM00347 helix_turn_helix multiple antibiotic resistance protein S100333_01200 SM00354 helix_turn _helix lactose operon repressor S100333_01225 SM00342 helix_turn_helix, arabinose operon control protein S100333_01226 SM00354 helix_turn _helix lactose operon repressor S100333_01230 SM00345 helix_turn_helix gluconate operon transcriptional repressor S100333_01237 SM00316 Ribosomal protein S1-like RNA-binding domain S100333_01239 SM00752 Horizontally Transferred TransMembrane Domain S100333_01257 SM00859 Semialdehyde dehydrogenase, NAD binding domain S100333_01261 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain S100333_01262 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain S100333_01274 SM00825 Beta-ketoacyl synthase S100333_01276 SM00382 ATPases associated with a variety of cellular activities S100333_01277 SM00382 ATPases associated with a variety of cellular activities S100333_01286 SM00382 ATPases associated with a variety of cellular activities S100333_01287 SM00382 ATPases associated with a variety of cellular activities S100333_01299 SM01118 S100333_01299 S100333_01301 SM00954 Region found in RelA / SpoT proteins S100333_01343 SM00530 Helix-turn-helix XRE-family like proteins S100333_01344 SM00530 Helix-turn-helix XRE-family like proteins S100333_01351 SM00530 Helix-turn-helix XRE-family like proteins S100333_01360 SM00028 Tetratricopeptide repeats S100333_01363 SM00860 SMI1 / KNR4 family S100333_01380 SM00635 Bacterial Ig-like domain 2 S100333_01400 SM00926 Molybdopterin oxidoreductase Fe4S4 domain S100333_01400 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region S100333_01411 SM00382 ATPases associated with a variety of cellular activities S100333_01420 SM00829 Enoylreductase S100333_01424 SM00354 helix_turn _helix lactose operon repressor S100333_01426 SM00858 S100333_01426 S100333_01432 SM00382 ATPases associated with a variety of cellular activities S100333_01435 SM00028 Tetratricopeptide repeats S100333_01438 SM00257 Lysin motif S100333_01438 SM00644 S100333_01438 S100333_01443 SM00530 Helix-turn-helix XRE-family like proteins S100333_01446 SM00382 ATPases associated with a variety of cellular activities S100333_01465 SM00257 Lysin motif S100333_01478 SM00257 Lysin motif S100333_01478 SM00644 S100333_01478 S100333_01488 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. S100333_01493 SM00382 ATPases associated with a variety of cellular activities S100333_01497 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain S100333_01499 SM00382 ATPases associated with a variety of cellular activities S100333_01511 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase S100333_01514 SM00347 helix_turn_helix multiple antibiotic resistance protein S100333_01521 SM00382 ATPases associated with a variety of cellular activities S100333_01524 SM00448 cheY-homologous receiver domain S100333_01524 SM00862 Transcriptional regulatory protein, C terminal S100333_01525 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain S100333_01525 SM00388 His Kinase A (phosphoacceptor) domain S100333_01526 SM00387 Histidine kinase-like ATPases S100333_01531 SM00116 Domain in cystathionine beta-synthase and other proteins. S100333_01531 SM00924 MgtE intracellular N domain S100333_01532 SM00422 helix_turn_helix, mercury resistance S100333_01535 SM00347 helix_turn_helix multiple antibiotic resistance protein S100333_01542 SM00559 Ku70 and Ku80 are 70kDa and 80kDa subunits of the Lupus Ku autoantigen S100333_01543 SM00052 Putative diguanylate phosphodiesterase S100333_01543 SM00267 diguanylate cyclase S100333_01555 SM00091 PAS domain S100333_01555 SM00387 Histidine kinase-like ATPases S100333_01555 SM00388 His Kinase A (phosphoacceptor) domain S100333_01564 SM01007 Class II Aldolase and Adducin N-terminal domain S100333_01569 SM00387 Histidine kinase-like ATPases S100333_01569 SM00388 His Kinase A (phosphoacceptor) domain S100333_01570 SM00347 helix_turn_helix multiple antibiotic resistance protein S100333_01573 SM00382 ATPases associated with a variety of cellular activities S100333_01573 SM01086 C-terminal, D2-small domain, of ClpB protein S100333_01588 SM00354 helix_turn _helix lactose operon repressor S100333_01590 SM01061 CAT RNA binding domain S100333_01597 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). S100333_01597 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain S100333_01602 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) S100333_01602 SM00091 PAS domain S100333_01602 SM00387 Histidine kinase-like ATPases S100333_01602 SM00388 His Kinase A (phosphoacceptor) domain S100333_01605 SM00260 Two component signalling adaptor domain S100333_01605 SM00448 cheY-homologous receiver domain S100333_01608 SM00257 Lysin motif S100333_01611 SM00052 Putative diguanylate phosphodiesterase S100333_01633 SM00852 Probable molybdopterin binding domain S100333_01639 SM00382 ATPases associated with a variety of cellular activities S100333_01642 SM00382 ATPases associated with a variety of cellular activities S100333_01643 SM01066 Carbohydrate binding domain S100333_01644 SM00420 helix_turn_helix, Deoxyribose operon repressor S100333_01644 SM01134 S100333_01644 S100333_01649 SM00382 ATPases associated with a variety of cellular activities S100333_01654 SM00966 SpoVT / AbrB like domain S100333_01655 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) S100333_01655 SM00091 PAS domain S100333_01655 SM00387 Histidine kinase-like ATPases S100333_01655 SM00388 His Kinase A (phosphoacceptor) domain S100333_01659 SM00849 Metallo-beta-lactamase superfamily S100333_01666 SM00861 Transketolase, pyrimidine binding domain S100333_01686 SM00838 Elongation factor G C-terminus S100333_01690 SM00670 Large family of predicted nucleotide-binding domains S100333_01695 SM00878 Biotin carboxylase C-terminal domain S100333_01704 SM00116 Domain in cystathionine beta-synthase and other proteins. S100333_01714 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. S100333_01726 SM00740 S100333_01726 S100333_01727 SM00740 S100333_01727 S100333_01738 SM00842 Cell division protein FtsA S100333_01739 SM00864 Tubulin/FtsZ family, GTPase domain S100333_01739 SM00865 Tubulin/FtsZ family, C-terminal domain S100333_01745 SM00382 ATPases associated with a variety of cellular activities S100333_01752 SM00363 S4 RNA-binding domain S100333_01757 SM00363 S4 RNA-binding domain S100333_01762 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain S100333_01763 SM00851 MGS-like domain S100333_01763 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain S100333_01766 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family S100333_01777 SM00831 Cation transporter/ATPase, N-terminus S100333_01780 SM00072 Guanylate kinase homologues. S100333_01781 SM01409 S100333_01781 S100333_01783 SM00487 DEAD-like helicases superfamily S100333_01783 SM00490 helicase superfamily c-terminal domain S100333_01788 SM00331 Sigma factor PP2C-like phosphatases S100333_01788 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain S100333_01789 SM00220 Serine/Threonine protein kinases, catalytic domain S100333_01789 SM00740 S100333_01789 S100333_01792 SM00983 Thiamin pyrophosphokinase, vitamin B1 binding domain S100333_01795 SM01120 S100333_01795 S100333_01795 SM01121 S100333_01795 S100333_01798 SM00487 DEAD-like helicases superfamily S100333_01798 SM00490 helicase superfamily c-terminal domain S100333_01801 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. S100333_01802 SM00822 S100333_01802 S100333_01804 SM00358 Double-stranded RNA binding motif S100333_01804 SM00535 Ribonuclease III family S100333_01805 SM00968 SMC proteins Flexible Hinge Domain S100333_01806 SM00382 ATPases associated with a variety of cellular activities S100333_01806 SM00962 SRP54-type protein, GTPase domain S100333_01806 SM00963 SRP54-type protein, helical bundle domain S100333_01810 SM00382 ATPases associated with a variety of cellular activities S100333_01810 SM00962 SRP54-type protein, GTPase domain S100333_01810 SM00963 SRP54-type protein, helical bundle domain S100333_01822 SM00881 CoA binding domain S100333_01824 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain S100333_01824 SM00437 Bacterial DNA topoisomerase I DNA-binding domain S100333_01824 SM00493 S100333_01824 S100333_01828 SM00382 ATPases associated with a variety of cellular activities S100333_01828 SM01086 C-terminal, D2-small domain, of ClpB protein S100333_01836 SM00382 ATPases associated with a variety of cellular activities S100333_01845 SM00448 cheY-homologous receiver domain S100333_01852 SM00962 SRP54-type protein, GTPase domain S100333_01854 SM00448 cheY-homologous receiver domain S100333_01855 SM00073 Histidine Phosphotransfer domain S100333_01855 SM00260 Two component signalling adaptor domain S100333_01855 SM00387 Histidine kinase-like ATPases S100333_01855 SM01231 S100333_01855 S100333_01856 SM00260 Two component signalling adaptor domain S100333_01868 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. S100333_01870 SM00479 S100333_01870 S100333_01870 SM00481 DNA polymerase alpha chain like domain S100333_01872 SM00316 Ribosomal protein S1-like RNA-binding domain S100333_01872 SM00322 K homology RNA-binding domain S100333_01879 SM00904 Riboflavin kinase S100333_01880 SM01387 S100333_01880 S100333_01881 SM00316 Ribosomal protein S1-like RNA-binding domain S100333_01881 SM00322 K homology RNA-binding domain S100333_01887 SM00859 Semialdehyde dehydrogenase, NAD binding domain S100333_01889 SM01130 S100333_01889 S100333_01890 SM00849 Metallo-beta-lactamase superfamily S100333_01894 SM00382 ATPases associated with a variety of cellular activities S100333_01894 SM00843 S100333_01894 S100333_01895 SM00345 helix_turn_helix gluconate operon transcriptional repressor S100333_01895 SM00866 S100333_01895 S100333_01903 SM00530 Helix-turn-helix XRE-family like proteins S100333_01905 SM00852 Probable molybdopterin binding domain S100333_01906 SM00382 ATPases associated with a variety of cellular activities S100333_01908 SM00322 K homology RNA-binding domain S100333_01908 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. S100333_01911 SM00829 Enoylreductase S100333_01913 SM00729 Elongator protein 3, MiaB family, Radical SAM S100333_01916 SM00533 DNA-binding domain of DNA mismatch repair MUTS family S100333_01916 SM00534 ATPase domain of DNA mismatch repair MUTS family S100333_01917 SM00853 MutL C terminal dimerisation domain S100333_01917 SM01340 S100333_01917 S100333_01922 SM00849 Metallo-beta-lactamase superfamily S100333_01939 SM00646 S100333_01939 S100333_01940 SM00382 ATPases associated with a variety of cellular activities S100333_01943 SM00422 helix_turn_helix, mercury resistance S100333_01944 SM01230 S100333_01944 S100333_01947 SM00530 Helix-turn-helix XRE-family like proteins S100333_01948 SM00530 Helix-turn-helix XRE-family like proteins S100333_01958 SM00885 D5 N terminal like S100333_01960 SM00891 ERCC4 domain S100333_01987 SM00047 Lysozyme subfamily 2 S100333_01994 SM00257 Lysin motif S100333_01994 SM00644 S100333_01994 S100333_01995 SM00860 SMI1 / KNR4 family S100333_02003 SM00860 SMI1 / KNR4 family S100333_02023 SM00318 Staphylococcal nuclease homologues S100333_02025 SM01005 Alanine racemase, C-terminal domain S100333_02054 SM00257 Lysin motif S100333_02055 SM00857 Resolvase, N terminal domain S100333_02057 SM00861 Transketolase, pyrimidine binding domain S100333_02062 SM00448 cheY-homologous receiver domain S100333_02076 SM01207 S100333_02076 S100333_02077 SM00881 CoA binding domain S100333_02078 SM00387 Histidine kinase-like ATPases S100333_02078 SM00433 TopoisomeraseII S100333_02079 SM00434 DNA Topoisomerase IV S100333_02083 SM01067 Cellulose binding domain S100333_02086 SM00606 Cellulose Binding Domain Type IV S100333_02098 SM00878 Biotin carboxylase C-terminal domain S100333_02103 SM00823 Phosphopantetheine attachment site S100333_02103 SM00824 Thioesterase S100333_02106 SM00823 Phosphopantetheine attachment site S100333_02116 SM00829 Enoylreductase S100333_02120 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase S100333_02123 SM00822 S100333_02123 S100333_02129 SM00382 ATPases associated with a variety of cellular activities S100333_02130 SM00347 helix_turn_helix multiple antibiotic resistance protein S100333_02134 SM00155 Phospholipase D. Active site motifs. S100333_02159 SM00656 S100333_02159 S100333_02163 SM00835 Cupin S100333_02164 SM00835 Cupin S100333_02170 SM00530 Helix-turn-helix XRE-family like proteins S100333_02182 SM00530 Helix-turn-helix XRE-family like proteins S100333_02204 SM00028 Tetratricopeptide repeats S100333_02218 SM00860 SMI1 / KNR4 family S100333_02219 SM00860 SMI1 / KNR4 family S100333_02220 SM00860 SMI1 / KNR4 family S100333_02224 SM00860 SMI1 / KNR4 family S100333_02227 SM00342 helix_turn_helix, arabinose operon control protein S100333_02231 SM00849 Metallo-beta-lactamase superfamily S100333_02232 SM00871 Bacterial transcription activator, effector binding domain S100333_02235 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor S100333_02244 SM00421 helix_turn_helix, Lux Regulon S100333_02244 SM00448 cheY-homologous receiver domain S100333_02246 SM00257 Lysin motif S100333_02247 SM00341 Helicase and RNase D C-terminal S100333_02247 SM00487 DEAD-like helicases superfamily S100333_02247 SM00490 helicase superfamily c-terminal domain S100333_02247 SM00956 S100333_02247 S100333_02266 SM00861 Transketolase, pyrimidine binding domain S100333_02267 SM00327 von Willebrand factor (vWF) type A domain S100333_02268 SM00382 ATPases associated with a variety of cellular activities S100333_02270 SM00257 Lysin motif S100333_02291 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. S100333_02291 SM00245 tail specific protease S100333_02298 SM00014 Acid phosphatase homologues S100333_02307 SM00882 Coenzyme A transferase S100333_02308 SM00882 Coenzyme A transferase S100333_02320 SM00347 helix_turn_helix multiple antibiotic resistance protein S100333_02328 SM00382 ATPases associated with a variety of cellular activities S100333_02337 SM00567 E-Z type HEAT repeats S100333_02337 SM00932 Scaffold protein Nfu/NifU N terminal S100333_02338 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. S100333_02342 SM00357 Cold shock protein domain S100333_02350 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs S100333_02350 SM00475 5'-3' exonuclease S100333_02363 SM00354 helix_turn _helix lactose operon repressor S100333_02366 SM00491 S100333_02366 S100333_02368 SM00981 S100333_02368 S100333_02372 SM00487 DEAD-like helicases superfamily S100333_02372 SM00490 helicase superfamily c-terminal domain S100333_02384 SM00478 endonuclease III S100333_02384 SM00525 S100333_02384 S100333_02390 SM00479 S100333_02390 S100333_02390 SM00487 DEAD-like helicases superfamily S100333_02390 SM00491 S100333_02390 S100333_02398 SM00851 MGS-like domain S100333_02408 SM00914 S100333_02408 S100333_02409 SM00028 Tetratricopeptide repeats S100333_02422 SM00138 Methyltransferase, chemotaxis proteins S100333_02423 SM00562 S100333_02423 S100333_02429 SM00411 bacterial (prokaryotic) histone like domain S100333_02441 SM01240 S100333_02441 S100333_02442 SM00316 Ribosomal protein S1-like RNA-binding domain S100333_02450 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase S100333_02455 SM00257 Lysin motif S100333_02457 SM00487 DEAD-like helicases superfamily S100333_02457 SM00490 helicase superfamily c-terminal domain S100333_02465 SM00091 PAS domain S100333_02465 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain S100333_02465 SM00387 Histidine kinase-like ATPases S100333_02465 SM00388 His Kinase A (phosphoacceptor) domain S100333_02466 SM00448 cheY-homologous receiver domain S100333_02466 SM00862 Transcriptional regulatory protein, C terminal S100333_02470 SM00363 S4 RNA-binding domain S100333_02473 SM00936 Penicillin-binding protein 5, C-terminal domain S100333_02490 SM00477 DNA/RNA non-specific endonuclease S100333_02490 SM00892 DNA/RNA non-specific endonuclease S100333_02492 SM00645 Papain family cysteine protease S100333_02499 SM00028 Tetratricopeptide repeats S100333_02501 SM00860 SMI1 / KNR4 family S100333_02524 SM00387 Histidine kinase-like ATPases S100333_02526 SM00936 Penicillin-binding protein 5, C-terminal domain S100333_02534 SM00919 Malic enzyme, NAD binding domain S100333_02534 SM01274 S100333_02534 S100333_02537 SM00870 S100333_02537 S100333_02538 SM00530 Helix-turn-helix XRE-family like proteins S100333_02559 SM00849 Metallo-beta-lactamase superfamily S100333_02565 SM00849 Metallo-beta-lactamase superfamily S100333_02567 SM01350 S100333_02567 S100333_02578 SM00382 ATPases associated with a variety of cellular activities S100333_02580 SM00062 Bacterial periplasmic substrate-binding proteins S100333_02580 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. S100333_02582 SM00046 Diacylglycerol kinase catalytic domain (presumed) S100333_02584 SM00422 helix_turn_helix, mercury resistance S100333_02586 SM00861 Transketolase, pyrimidine binding domain S100333_02591 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase S100333_02593 SM00091 PAS domain S100333_02593 SM00382 ATPases associated with a variety of cellular activities S100333_02603 SM00646 S100333_02603 S100333_02607 SM00448 cheY-homologous receiver domain S100333_02608 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. S100333_02611 SM00363 S4 RNA-binding domain S100333_02612 SM00861 Transketolase, pyrimidine binding domain S100333_02619 SM00878 Biotin carboxylase C-terminal domain S100333_02629 SM00382 ATPases associated with a variety of cellular activities S100333_02631 SM00841 Elongation factor P, C-terminal S100333_02631 SM01185 S100333_02631 S100333_02638 SM00529 Helix-turn-helix diphteria tox regulatory element S100333_02640 SM00450 Rhodanese Homology Domain S100333_02644 SM00487 DEAD-like helicases superfamily S100333_02644 SM00490 helicase superfamily c-terminal domain S100333_02647 SM00530 Helix-turn-helix XRE-family like proteins S100333_02659 SM00382 ATPases associated with a variety of cellular activities S100333_02662 SM01091 Transporter associated domain S100333_02667 SM00849 Metallo-beta-lactamase superfamily S100333_02671 SM00631 S100333_02671 S100333_02675 SM00028 Tetratricopeptide repeats S100333_02683 SM00382 ATPases associated with a variety of cellular activities S100333_02684 SM00382 ATPases associated with a variety of cellular activities S100333_02693 SM00257 Lysin motif S100333_02700 SM00518 AP endonuclease family 2 S100333_02701 SM00487 DEAD-like helicases superfamily S100333_02701 SM00490 helicase superfamily c-terminal domain S100333_02708 SM00400 zinc finger S100333_02708 SM00493 S100333_02708 S100333_02711 SM00116 Domain in cystathionine beta-synthase and other proteins. S100333_02720 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. S100333_02731 SM00729 Elongator protein 3, MiaB family, Radical SAM S100333_02734 SM00271 DnaJ molecular chaperone homology domain S100333_02738 SM00729 Elongator protein 3, MiaB family, Radical SAM S100333_02739 SM00838 Elongation factor G C-terminus S100333_02746 SM00849 Metallo-beta-lactamase superfamily S100333_02748 SM00278 Helix-hairpin-helix DNA-binding motif class 1 S100333_02752 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. S100333_02754 SM01103 S100333_02754 S100333_02760 SM00644 S100333_02760 S100333_02762 SM01350 S100333_02762 S100333_02770 SM00028 Tetratricopeptide repeats S100333_02775 SM00860 SMI1 / KNR4 family S100333_02776 SM00860 SMI1 / KNR4 family S100333_02785 SM00382 ATPases associated with a variety of cellular activities S100333_02794 SM00422 helix_turn_helix, mercury resistance S100333_02798 SM01091 Transporter associated domain S100333_02809 SM00344 helix_turn_helix ASNC type S100333_02828 SM00287 Bacterial SH3 domain homologues S100333_02836 SM00422 helix_turn_helix, mercury resistance S100333_02838 SM00829 Enoylreductase S100333_02840 SM00640 Glycosyl hydrolases family 32 S100333_02845 SM00382 ATPases associated with a variety of cellular activities S100333_02862 SM00926 Molybdopterin oxidoreductase Fe4S4 domain S100333_02862 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region S100333_02868 SM00650 Ribosomal RNA adenine dimethylases S100333_02879 SM00732 Likely ribonuclease with RNase H fold. S100333_02881 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain S100333_02883 SM00382 ATPases associated with a variety of cellular activities S100333_02884 SM00062 Bacterial periplasmic substrate-binding proteins S100333_02884 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. S100333_02890 SM00382 ATPases associated with a variety of cellular activities S100333_02891 SM00028 Tetratricopeptide repeats S100333_02895 SM00382 ATPases associated with a variety of cellular activities S100333_02900 SM00287 Bacterial SH3 domain homologues S100333_02900 SM00646 S100333_02900 S100333_02902 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. S100333_02902 SM00954 Region found in RelA / SpoT proteins S100333_02912 SM01323 S100333_02912 S100333_02916 SM00382 ATPases associated with a variety of cellular activities S100333_02917 SM00278 Helix-hairpin-helix DNA-binding motif class 1 S100333_02928 SM00257 Lysin motif S100333_02937 SM01317 S100333_02937 S100333_02956 SM00257 Lysin motif S100333_02958 SM01004 Delta-aminolevulinic acid dehydratase S100333_02965 SM00382 ATPases associated with a variety of cellular activities S100333_02965 SM00464 Found in ATP-dependent protease La (LON) S100333_02968 SM00382 ATPases associated with a variety of cellular activities S100333_02968 SM00994 ClpX C4-type zinc finger S100333_02968 SM01086 C-terminal, D2-small domain, of ClpB protein S100333_02973 SM01329 S100333_02973 S100333_02974 SM00917 LeuA allosteric (dimerisation) domain S100333_02984 SM00857 Resolvase, N terminal domain S100333_02987 SM00487 DEAD-like helicases superfamily S100333_02987 SM00490 helicase superfamily c-terminal domain S100333_02995 SM00909 Sporulation and spore germination S100333_02997 SM00347 helix_turn_helix multiple antibiotic resistance protein S100333_02998 SM00421 helix_turn_helix, Lux Regulon S100333_03005 SM00465 GIY-YIG type nucleases (URI domain) S100333_03007 SM00813 Alpha-L-arabinofuranosidase C-terminus S100333_03009 SM00893 Electron transfer flavoprotein domain S100333_03010 SM00893 Electron transfer flavoprotein domain S100333_03015 SM00463 Small MutS-related domain S100333_03015 SM00533 DNA-binding domain of DNA mismatch repair MUTS family S100333_03015 SM00534 ATPase domain of DNA mismatch repair MUTS family S100333_03016 SM00278 Helix-hairpin-helix DNA-binding motif class 1 S100333_03016 SM00481 DNA polymerase alpha chain like domain S100333_03016 SM00483 DNA polymerase X family S100333_03020 SM00873 B3/4 domain S100333_03020 SM00874 tRNA synthetase B5 domain S100333_03020 SM00896 Ferredoxin-fold anticodon binding domain S100333_03022 SM00967 RNA 2'-O ribose methyltransferase substrate binding S100333_03029 SM00813 Alpha-L-arabinofuranosidase C-terminus S100333_03035 SM01007 Class II Aldolase and Adducin N-terminal domain S100333_03048 SM00448 cheY-homologous receiver domain S100333_03048 SM00850 LytTr DNA-binding domain S100333_03049 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. S100333_03049 SM00387 Histidine kinase-like ATPases S100333_03051 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain S100333_03055 SM00382 ATPases associated with a variety of cellular activities S100333_03059 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain S100333_03065 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain S100333_03065 SM01232 S100333_03065 S100333_03066 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs S100333_03066 SM00474 3'-5' exonuclease S100333_03066 SM00475 5'-3' exonuclease S100333_03066 SM00482 DNA polymerase A domain S100333_03067 SM00387 Histidine kinase-like ATPases S100333_03068 SM00091 PAS domain S100333_03068 SM00388 His Kinase A (phosphoacceptor) domain S100333_03069 SM00448 cheY-homologous receiver domain S100333_03069 SM00862 Transcriptional regulatory protein, C terminal S100333_03071 SM01329 S100333_03071 S100333_03080 SM00919 Malic enzyme, NAD binding domain S100333_03080 SM01274 S100333_03080 S100333_03081 SM00481 DNA polymerase alpha chain like domain S100333_03087 SM00116 Domain in cystathionine beta-synthase and other proteins. S100333_03088 SM00849 Metallo-beta-lactamase superfamily S100333_03093 SM00852 Probable molybdopterin binding domain S100333_03105 SM00981 S100333_03105 S100333_03111 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. S100333_03114 SM00267 diguanylate cyclase S100333_03116 SM00363 S4 RNA-binding domain S100333_03116 SM01390 S100333_03116 S100333_03118 SM00363 S4 RNA-binding domain S100333_03121 SM00116 Domain in cystathionine beta-synthase and other proteins. S100333_03126 SM00354 helix_turn _helix lactose operon repressor S100333_03127 SM00830 Chorismate mutase type II S100333_03132 SM00382 ATPases associated with a variety of cellular activities S100333_03132 SM00843 S100333_03132 S100333_03139 SM00919 Malic enzyme, NAD binding domain S100333_03139 SM01274 S100333_03139 S100333_03140 SM00849 Metallo-beta-lactamase superfamily S100333_03144 SM00642 Alpha-amylase domain S100333_03146 SM00046 Diacylglycerol kinase catalytic domain (presumed) S100333_03153 SM00382 ATPases associated with a variety of cellular activities S100333_03154 SM00420 helix_turn_helix, Deoxyribose operon repressor S100333_03155 SM00363 S4 RNA-binding domain S100333_03167 SM00342 helix_turn_helix, arabinose operon control protein S100333_03172 SM00729 Elongator protein 3, MiaB family, Radical SAM S100333_03172 SM00876 Biotin and Thiamin Synthesis associated domain S100333_03178 SM00354 helix_turn _helix lactose operon repressor S100333_03183 SM00450 Rhodanese Homology Domain S100333_03186 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) S100333_03186 SM00091 PAS domain S100333_03190 SM00382 ATPases associated with a variety of cellular activities S100333_03191 SM00387 Histidine kinase-like ATPases S100333_03192 SM00448 cheY-homologous receiver domain S100333_03192 SM00862 Transcriptional regulatory protein, C terminal S100333_03194 SM00382 ATPases associated with a variety of cellular activities S100333_03197 SM00382 ATPases associated with a variety of cellular activities S100333_03198 SM00345 helix_turn_helix gluconate operon transcriptional repressor S100333_03201 SM00729 Elongator protein 3, MiaB family, Radical SAM S100333_03213 SM00382 ATPases associated with a variety of cellular activities S100333_03221 SM00947 Carbonic anhydrase S100333_03228 SM00382 ATPases associated with a variety of cellular activities S100333_03230 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain S100333_03238 SM00984 UDP binding domain S100333_03250 SM00642 Alpha-amylase domain S100333_03277 SM00244 prohibitin homologues S100333_03291 SM00047 Lysozyme subfamily 2 S100333_03301 SM00420 helix_turn_helix, Deoxyribose operon repressor S100333_03301 SM01134 S100333_03301 S100333_03302 SM01007 Class II Aldolase and Adducin N-terminal domain S100333_03303 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). S100333_03303 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain S100333_03304 SM00319 Homologues of the ligand binding domain of Tar S100333_03305 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). S100333_03305 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain S100333_03305 SM00319 Homologues of the ligand binding domain of Tar S100333_03306 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). S100333_03306 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain S100333_03306 SM00319 Homologues of the ligand binding domain of Tar S100333_03307 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). S100333_03308 SM00319 Homologues of the ligand binding domain of Tar S100333_03311 SM00642 Alpha-amylase domain S100333_03312 SM01091 Transporter associated domain S100333_03323 SM00316 Ribosomal protein S1-like RNA-binding domain S100333_03325 SM00344 helix_turn_helix ASNC type S100333_03329 SM00387 Histidine kinase-like ATPases S100333_03329 SM00388 His Kinase A (phosphoacceptor) domain S100333_03330 SM01298 S100333_03330 S100333_03331 SM00479 S100333_03331 S100333_03337 SM00091 PAS domain S100333_03337 SM00387 Histidine kinase-like ATPases S100333_03338 SM00448 cheY-homologous receiver domain S100333_03340 SM00382 ATPases associated with a variety of cellular activities S100333_03353 SM00421 helix_turn_helix, Lux Regulon S100333_03353 SM00448 cheY-homologous receiver domain S100333_03354 SM00387 Histidine kinase-like ATPases S100333_03360 SM00052 Putative diguanylate phosphodiesterase S100333_03369 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. S100333_03378 SM01002 Alanine dehydrogenase/PNT, C-terminal domain S100333_03378 SM01003 Alanine dehydrogenase/PNT, N-terminal domain S100333_03380 SM00923 MbtH-like protein S100333_03381 SM00823 Phosphopantetheine attachment site S100333_03381 SM00824 Thioesterase S100333_03397 SM01240 S100333_03397 S100333_03417 SM00729 Elongator protein 3, MiaB family, Radical SAM S100333_03434 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain S100333_03441 SM00382 ATPases associated with a variety of cellular activities S100333_03442 SM00345 helix_turn_helix gluconate operon transcriptional repressor S100333_03442 SM00866 S100333_03442 S100333_03450 SM00465 GIY-YIG type nucleases (URI domain) S100333_03457 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor S100333_03462 SM00382 ATPases associated with a variety of cellular activities S100333_03466 SM00382 ATPases associated with a variety of cellular activities S100333_03466 SM00930 S100333_03466 S100333_03469 SM00493 S100333_03469 S100333_03480 SM00347 helix_turn_helix multiple antibiotic resistance protein S100333_03486 SM00382 ATPases associated with a variety of cellular activities S100333_03492 SM00382 ATPases associated with a variety of cellular activities S100333_03496 SM00382 ATPases associated with a variety of cellular activities S100333_03506 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. S100333_03507 SM00448 cheY-homologous receiver domain S100333_03507 SM00862 Transcriptional regulatory protein, C terminal S100333_03508 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain S100333_03508 SM00387 Histidine kinase-like ATPases S100333_03508 SM00388 His Kinase A (phosphoacceptor) domain S100333_03515 SM00421 helix_turn_helix, Lux Regulon S100333_03515 SM00448 cheY-homologous receiver domain S100333_03516 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain S100333_03516 SM00387 Histidine kinase-like ATPases S100333_03523 SM00382 ATPases associated with a variety of cellular activities S100333_03530 SM00387 Histidine kinase-like ATPases S100333_03530 SM00388 His Kinase A (phosphoacceptor) domain S100333_03531 SM00448 cheY-homologous receiver domain S100333_03531 SM00862 Transcriptional regulatory protein, C terminal S100333_03534 SM00835 Cupin S100333_03537 SM00382 ATPases associated with a variety of cellular activities S100333_03539 SM00382 ATPases associated with a variety of cellular activities S100333_03578 SM00257 Lysin motif S100333_03578 SM00644 S100333_03578 S100333_03584 SM00047 Lysozyme subfamily 2 S100333_03602 SM00507 HNH nucleases S100333_03627 SM00530 Helix-turn-helix XRE-family like proteins S100333_03628 SM00530 Helix-turn-helix XRE-family like proteins S100333_03629 SM00530 Helix-turn-helix XRE-family like proteins S100333_03636 SM00316 Ribosomal protein S1-like RNA-binding domain S100333_03636 SM00357 Cold shock protein domain S100333_03636 SM00955 S100333_03636 S100333_03640 SM00530 Helix-turn-helix XRE-family like proteins S100333_03641 SM00530 Helix-turn-helix XRE-family like proteins S100333_03642 SM00530 Helix-turn-helix XRE-family like proteins S100333_03644 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). S100333_03644 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain S100333_03649 SM00116 Domain in cystathionine beta-synthase and other proteins. S100333_03655 SM00116 Domain in cystathionine beta-synthase and other proteins. S100333_03655 SM00382 ATPases associated with a variety of cellular activities S100333_03662 SM01192 S100333_03662 S100333_03662 SM01193 S100333_03662 S100333_03666 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain S100333_03669 SM00345 helix_turn_helix gluconate operon transcriptional repressor S100333_03674 SM00636 S100333_03674 S100333_03678 SM00421 helix_turn_helix, Lux Regulon S100333_03678 SM00448 cheY-homologous receiver domain S100333_03681 SM00382 ATPases associated with a variety of cellular activities S100333_03684 SM01022 S100333_03684 S100333_03686 SM00331 Sigma factor PP2C-like phosphatases S100333_03692 SM00354 helix_turn _helix lactose operon repressor S100333_03693 SM00345 helix_turn_helix gluconate operon transcriptional repressor S100333_03693 SM00895 S100333_03693 S100333_03712 SM00530 Helix-turn-helix XRE-family like proteins S100333_03721 SM00640 Glycosyl hydrolases family 32 S100333_03730 SM00642 Alpha-amylase domain S100333_03735 SM00642 Alpha-amylase domain S100333_03736 SM00354 helix_turn _helix lactose operon repressor S100333_03740 SM00947 Carbonic anhydrase S100333_03743 SM00382 ATPases associated with a variety of cellular activities S100333_03744 SM00387 Histidine kinase-like ATPases S100333_03745 SM00448 cheY-homologous receiver domain S100333_03745 SM00862 Transcriptional regulatory protein, C terminal S100333_03756 SM00028 Tetratricopeptide repeats S100333_03757 SM00382 ATPases associated with a variety of cellular activities S100333_03780 SM00345 helix_turn_helix gluconate operon transcriptional repressor S100333_03780 SM00866 S100333_03780 S100333_03788 SM00382 ATPases associated with a variety of cellular activities S100333_03789 SM00487 DEAD-like helicases superfamily S100333_03789 SM00490 helicase superfamily c-terminal domain S100333_03795 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. S100333_03797 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. S100333_03797 SM00245 tail specific protease S100333_03799 SM00382 ATPases associated with a variety of cellular activities S100333_03802 SM00937 S100333_03802 S100333_03803 SM00957 SecA DEAD-like domain S100333_03803 SM00958 SecA preprotein cross-linking domain S100333_03823 SM00487 DEAD-like helicases superfamily S100333_03823 SM00490 helicase superfamily c-terminal domain S100333_03825 SM00421 helix_turn_helix, Lux Regulon S100333_03825 SM00448 cheY-homologous receiver domain S100333_03826 SM00387 Histidine kinase-like ATPases S100333_03835 SM00382 ATPases associated with a variety of cellular activities S100333_03843 SM00984 UDP binding domain S100333_03847 SM00646 S100333_03847 S100333_03854 SM00382 ATPases associated with a variety of cellular activities S100333_03862 SM00047 Lysozyme subfamily 2 S100333_03862 SM00287 Bacterial SH3 domain homologues S100333_03873 SM00854 Bacterial capsule synthesis protein PGA_cap S100333_03876 SM00354 helix_turn _helix lactose operon repressor S100333_03879 SM00382 ATPases associated with a variety of cellular activities S100333_03882 SM00287 Bacterial SH3 domain homologues S100333_03893 SM00903 Flavin reductase like domain S100333_03896 SM00344 helix_turn_helix ASNC type S100333_03913 SM00984 UDP binding domain S100333_03919 SM00487 DEAD-like helicases superfamily S100333_03919 SM00490 helicase superfamily c-terminal domain S100333_03921 SM00420 helix_turn_helix, Deoxyribose operon repressor S100333_03921 SM01134 S100333_03921 S100333_03926 SM00387 Histidine kinase-like ATPases S100333_03929 SM00028 Tetratricopeptide repeats S100333_03934 SM00347 helix_turn_helix multiple antibiotic resistance protein S100333_03936 SM00710 Parallel beta-helix repeats S100333_03936 SM00722 Domain present in carbohydrate binding proteins and sugar hydrolses S100333_03942 SM00938 Nitrogen regulatory protein P-II S100333_03943 SM00014 Acid phosphatase homologues S100333_03950 SM00155 Phospholipase D. Active site motifs. S100333_03951 SM00422 helix_turn_helix, mercury resistance S100333_03962 SM00028 Tetratricopeptide repeats S100333_03963 SM00729 Elongator protein 3, MiaB family, Radical SAM S100333_03966 SM00327 von Willebrand factor (vWF) type A domain S100333_03967 SM00327 von Willebrand factor (vWF) type A domain S100333_03974 SM00382 ATPases associated with a variety of cellular activities S100333_03986 SM00226 Low molecular weight phosphatase family S100333_03994 SM00937 S100333_03994 S100333_03998 SM00919 Malic enzyme, NAD binding domain S100333_03998 SM01274 S100333_03998 S100333_04001 SM00357 Cold shock protein domain S100333_04001 SM00382 ATPases associated with a variety of cellular activities S100333_04001 SM00959 Rho termination factor, N-terminal domain S100333_04007 SM00448 cheY-homologous receiver domain S100333_04015 SM00155 Phospholipase D. Active site motifs. S100333_04020 SM00836 DALR anticodon binding domain S100333_04020 SM01016 Arginyl tRNA synthetase N terminal dom S100333_04023 SM00729 Elongator protein 3, MiaB family, Radical SAM S100333_04033 SM00028 Tetratricopeptide repeats S100333_04042 SM00347 helix_turn_helix multiple antibiotic resistance protein S100333_04043 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain S100333_04048 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. S100333_04062 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase S100333_04070 SM00858 S100333_04070 S100333_04080 SM00986 Uracil DNA glycosylase superfamily S100333_04080 SM00987 UreE urease accessory protein, C-terminal domain S100333_04084 SM00640 Glycosyl hydrolases family 32 S100333_04087 SM01061 CAT RNA binding domain S100333_04118 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase S100333_04125 SM01061 CAT RNA binding domain S100333_04128 SM00347 helix_turn_helix multiple antibiotic resistance protein S100333_04129 SM00363 S4 RNA-binding domain S100333_04131 SM00954 Region found in RelA / SpoT proteins S100333_04151 SM01060 S100333_04151 S100333_04154 SM00382 ATPases associated with a variety of cellular activities S100333_04161 SM00382 ATPases associated with a variety of cellular activities S100333_04162 SM00382 ATPases associated with a variety of cellular activities S100333_04169 SM00382 ATPases associated with a variety of cellular activities S100333_04176 SM00421 helix_turn_helix, Lux Regulon S100333_04176 SM00448 cheY-homologous receiver domain S100333_04184 SM00882 Coenzyme A transferase S100333_04185 SM00882 Coenzyme A transferase S100333_04191 SM01060 S100333_04191 S100333_04194 SM01061 CAT RNA binding domain S100333_04197 SM00487 DEAD-like helicases superfamily S100333_04197 SM00490 helicase superfamily c-terminal domain S100333_04227 SM00860 SMI1 / KNR4 family S100333_04237 SM00941 Pyrimidine nucleoside phosphorylase C-terminal domain S100333_04239 SM01133 S100333_04239 S100333_04245 SM00382 ATPases associated with a variety of cellular activities S100333_04247 SM00062 Bacterial periplasmic substrate-binding proteins S100333_04260 SM00382 ATPases associated with a variety of cellular activities S100333_04261 SM00387 Histidine kinase-like ATPases S100333_04262 SM00448 cheY-homologous receiver domain S100333_04262 SM00862 Transcriptional regulatory protein, C terminal S100333_04273 SM00420 helix_turn_helix, Deoxyribose operon repressor S100333_04273 SM01134 S100333_04273 S100333_04279 SM00387 Histidine kinase-like ATPases S100333_04283 SM00530 Helix-turn-helix XRE-family like proteins S100333_04289 SM00382 ATPases associated with a variety of cellular activities S100333_04297 SM00347 helix_turn_helix multiple antibiotic resistance protein S100333_04302 SM00345 helix_turn_helix gluconate operon transcriptional repressor S100333_04302 SM00895 S100333_04302 S100333_04305 SM01350 S100333_04305 S100333_04310 SM00345 helix_turn_helix gluconate operon transcriptional repressor S100333_04310 SM00866 S100333_04310 S100333_04312 SM00382 ATPases associated with a variety of cellular activities S100333_04317 SM00382 ATPases associated with a variety of cellular activities S100333_04329 SM00487 DEAD-like helicases superfamily S100333_04329 SM00490 helicase superfamily c-terminal domain S100333_04347 SM00752 Horizontally Transferred TransMembrane Domain S100333_04350 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor S100333_04351 SM00091 PAS domain S100333_04351 SM00382 ATPases associated with a variety of cellular activities S100333_04352 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. S100333_04353 SM00849 Metallo-beta-lactamase superfamily S100333_04356 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) S100333_04356 SM00091 PAS domain S100333_04356 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain S100333_04356 SM00387 Histidine kinase-like ATPases S100333_04356 SM00388 His Kinase A (phosphoacceptor) domain S100333_04357 SM00448 cheY-homologous receiver domain S100333_04357 SM00862 Transcriptional regulatory protein, C terminal S100333_04362 SM00788 Adenylosuccinate synthetase S100333_04364 SM00382 ATPases associated with a variety of cellular activities S100333_04371 SM00267 diguanylate cyclase S100333_04378 SM01131 S100333_04378 S100333_04382 SM00422 helix_turn_helix, mercury resistance S100333_04388 SM00347 helix_turn_helix multiple antibiotic resistance protein S100333_04395 SM00871 Bacterial transcription activator, effector binding domain S100333_04401 SM00382 ATPases associated with a variety of cellular activities S100333_04403 SM00354 helix_turn _helix lactose operon repressor S100333_04409 SM00926 Molybdopterin oxidoreductase Fe4S4 domain S100333_04413 SM00470 ParB-like nuclease domain S100333_04416 SM00470 ParB-like nuclease domain S100333_04418 SM01228 S100333_04418 S100333_04420 SM00322 K homology RNA-binding domain S100333_04420 SM00393 Putative single-stranded nucleic acids-binding domain S100333_04420 SM01245 S100333_04420 S100333_04442 SM00530 Helix-turn-helix XRE-family like proteins S100333_04494 SM00318 Staphylococcal nuclease homologues