S101392_00001 SM00382 ATPases associated with a variety of cellular activities S101392_00001 SM00760 Bacterial dnaA protein helix-turn-helix domain S101392_00002 SM00480 DNA polymerase III beta subunit S101392_00006 SM00387 Histidine kinase-like ATPases S101392_00006 SM00433 TopoisomeraseII S101392_00007 SM00434 DNA Topoisomerase IV S101392_00014 SM00116 Domain in cystathionine beta-synthase and other proteins. S101392_00014 SM01240 S101392_00014 S101392_00015 SM00936 Penicillin-binding protein 5, C-terminal domain S101392_00022 SM00257 Lysin motif S101392_00022 SM00636 S101392_00022 S101392_00025 SM00382 ATPases associated with a variety of cellular activities S101392_00027 SM00493 S101392_00027 S101392_00046 SM00465 GIY-YIG type nucleases (URI domain) S101392_00048 SM00966 SpoVT / AbrB like domain S101392_00051 SM01208 S101392_00051 S101392_00052 SM00493 S101392_00052 S101392_00053 SM00650 Ribosomal RNA adenine dimethylases S101392_00062 SM01400 S101392_00062 S101392_00066 SM00487 DEAD-like helicases superfamily S101392_00066 SM00490 helicase superfamily c-terminal domain S101392_00066 SM00982 S101392_00066 S101392_00066 SM01058 CarD-like/TRCF domain S101392_00067 SM00966 SpoVT / AbrB like domain S101392_00070 SM00363 S4 RNA-binding domain S101392_00074 SM00316 Ribosomal protein S1-like RNA-binding domain S101392_00077 SM00331 Sigma factor PP2C-like phosphatases S101392_00077 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain S101392_00079 SM00220 Serine/Threonine protein kinases, catalytic domain S101392_00080 SM00977 TilS substrate C-terminal domain S101392_00082 SM00382 ATPases associated with a variety of cellular activities S101392_00091 SM00905 Dihydroneopterin aldolase S101392_00093 SM00530 Helix-turn-helix XRE-family like proteins S101392_00114 SM00382 ATPases associated with a variety of cellular activities S101392_00114 SM01086 C-terminal, D2-small domain, of ClpB protein S101392_00115 SM00382 ATPases associated with a variety of cellular activities S101392_00117 SM00670 Large family of predicted nucleotide-binding domains S101392_00122 SM00840 S101392_00122 S101392_00123 SM00535 Ribonuclease III family S101392_00124 SM00967 RNA 2'-O ribose methyltransferase substrate binding S101392_00128 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. S101392_00128 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. S101392_00129 SM00649 Ribosomal protein L11/L12 S101392_00135 SM00663 RNA polymerase I subunit A N-terminus S101392_00139 SM00838 Elongation factor G C-terminus S101392_00139 SM00889 Elongation factor G, domain IV S101392_00142 SM01403 S101392_00142 S101392_00146 SM01382 S101392_00146 S101392_00146 SM01383 S101392_00146 S101392_00149 SM00322 K homology RNA-binding domain S101392_00153 SM01374 S101392_00153 S101392_00154 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. S101392_00166 SM00316 Ribosomal protein S1-like RNA-binding domain S101392_00170 SM00662 RNA polymerases D S101392_00172 SM00382 ATPases associated with a variety of cellular activities S101392_00173 SM00382 ATPases associated with a variety of cellular activities S101392_00180 SM00646 S101392_00180 S101392_00183 SM01251 S101392_00183 S101392_00194 SM00530 Helix-turn-helix XRE-family like proteins S101392_00195 SM00530 Helix-turn-helix XRE-family like proteins S101392_00208 SM00470 ParB-like nuclease domain S101392_00236 SM00342 helix_turn_helix, arabinose operon control protein S101392_00257 SM00478 endonuclease III S101392_00258 SM00342 helix_turn_helix, arabinose operon control protein S101392_00267 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor S101392_00274 SM00448 cheY-homologous receiver domain S101392_00274 SM00862 Transcriptional regulatory protein, C terminal S101392_00275 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain S101392_00275 SM00388 His Kinase A (phosphoacceptor) domain S101392_00290 SM00347 helix_turn_helix multiple antibiotic resistance protein S101392_00293 SM00342 helix_turn_helix, arabinose operon control protein S101392_00305 SM00450 Rhodanese Homology Domain S101392_00309 SM00345 helix_turn_helix gluconate operon transcriptional repressor S101392_00309 SM00866 S101392_00309 S101392_00316 SM00387 Histidine kinase-like ATPases S101392_00317 SM00448 cheY-homologous receiver domain S101392_00318 SM01130 S101392_00318 S101392_00321 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain S101392_00322 SM00345 helix_turn_helix gluconate operon transcriptional repressor S101392_00322 SM00895 S101392_00322 S101392_00323 SM00858 S101392_00323 S101392_00327 SM00448 cheY-homologous receiver domain S101392_00327 SM00862 Transcriptional regulatory protein, C terminal S101392_00328 SM00387 Histidine kinase-like ATPases S101392_00328 SM00388 His Kinase A (phosphoacceptor) domain S101392_00329 SM00382 ATPases associated with a variety of cellular activities S101392_00333 SM00327 von Willebrand factor (vWF) type A domain S101392_00341 SM00870 S101392_00341 S101392_00345 SM00387 Histidine kinase-like ATPases S101392_00346 SM00448 cheY-homologous receiver domain S101392_00346 SM00850 LytTr DNA-binding domain S101392_00347 SM00382 ATPases associated with a variety of cellular activities S101392_00354 SM00028 Tetratricopeptide repeats S101392_00356 SM00642 Alpha-amylase domain S101392_00358 SM00382 ATPases associated with a variety of cellular activities S101392_00369 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor S101392_00370 SM00116 Domain in cystathionine beta-synthase and other proteins. S101392_00370 SM00382 ATPases associated with a variety of cellular activities S101392_00376 SM00632 S101392_00376 S101392_00376 SM00642 Alpha-amylase domain S101392_00380 SM00347 helix_turn_helix multiple antibiotic resistance protein S101392_00403 SM00926 Molybdopterin oxidoreductase Fe4S4 domain S101392_00408 SM00833 Cobalamin synthesis protein cobW C-terminal domain S101392_00410 SM00062 Bacterial periplasmic substrate-binding proteins S101392_00415 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). S101392_00415 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain S101392_00417 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family S101392_00419 SM00823 Phosphopantetheine attachment site S101392_00419 SM01294 S101392_00419 S101392_00420 SM00823 Phosphopantetheine attachment site S101392_00420 SM01294 S101392_00420 S101392_00421 SM00823 Phosphopantetheine attachment site S101392_00426 SM00345 helix_turn_helix gluconate operon transcriptional repressor S101392_00429 SM00382 ATPases associated with a variety of cellular activities S101392_00431 SM00062 Bacterial periplasmic substrate-binding proteins S101392_00439 SM00710 Parallel beta-helix repeats S101392_00439 SM00722 Domain present in carbohydrate binding proteins and sugar hydrolses S101392_00444 SM00382 ATPases associated with a variety of cellular activities S101392_00446 SM00448 cheY-homologous receiver domain S101392_00446 SM00862 Transcriptional regulatory protein, C terminal S101392_00447 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain S101392_00447 SM00387 Histidine kinase-like ATPases S101392_00447 SM00388 His Kinase A (phosphoacceptor) domain S101392_00448 SM00028 Tetratricopeptide repeats S101392_00454 SM00382 ATPases associated with a variety of cellular activities S101392_00460 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor S101392_00461 SM00345 helix_turn_helix gluconate operon transcriptional repressor S101392_00468 SM00420 helix_turn_helix, Deoxyribose operon repressor S101392_00473 SM01329 S101392_00473 S101392_00483 SM00796 Allophanate hydrolase subunit 1 S101392_00484 SM00797 Allophanate hydrolase subunit 2 S101392_00485 SM00346 helix_turn_helix isocitrate lyase regulation S101392_00500 SM00344 helix_turn_helix ASNC type S101392_00501 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain S101392_00501 SM00437 Bacterial DNA topoisomerase I DNA-binding domain S101392_00501 SM00493 S101392_00501 S101392_00503 SM00267 diguanylate cyclase S101392_00521 SM00091 PAS domain S101392_00521 SM00387 Histidine kinase-like ATPases S101392_00522 SM00448 cheY-homologous receiver domain S101392_00526 SM00382 ATPases associated with a variety of cellular activities S101392_00536 SM00487 DEAD-like helicases superfamily S101392_00536 SM00490 helicase superfamily c-terminal domain S101392_00542 SM01005 Alanine racemase, C-terminal domain S101392_00547 SM00387 Histidine kinase-like ATPases S101392_00548 SM00331 Sigma factor PP2C-like phosphatases S101392_00552 SM00331 Sigma factor PP2C-like phosphatases S101392_00552 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain S101392_00553 SM00316 Ribosomal protein S1-like RNA-binding domain S101392_00553 SM00732 Likely ribonuclease with RNase H fold. S101392_00554 SM00731 SprT homologues. S101392_00566 SM00220 Serine/Threonine protein kinases, catalytic domain S101392_00566 SM01260 S101392_00566 S101392_00572 SM00220 Serine/Threonine protein kinases, catalytic domain S101392_00572 SM01260 S101392_00572 S101392_00573 SM00382 ATPases associated with a variety of cellular activities S101392_00576 SM00530 Helix-turn-helix XRE-family like proteins S101392_00579 SM00357 Cold shock protein domain S101392_00580 SM01058 CarD-like/TRCF domain S101392_00582 SM00342 helix_turn_helix, arabinose operon control protein S101392_00584 SM00342 helix_turn_helix, arabinose operon control protein S101392_00584 SM00871 Bacterial transcription activator, effector binding domain S101392_00585 SM00345 helix_turn_helix gluconate operon transcriptional repressor S101392_00594 SM00345 helix_turn_helix gluconate operon transcriptional repressor S101392_00601 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor S101392_00605 SM00345 helix_turn_helix gluconate operon transcriptional repressor S101392_00607 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor S101392_00610 SM00387 Histidine kinase-like ATPases S101392_00611 SM00421 helix_turn_helix, Lux Regulon S101392_00611 SM00448 cheY-homologous receiver domain S101392_00616 SM00422 helix_turn_helix, mercury resistance S101392_00616 SM00871 Bacterial transcription activator, effector binding domain S101392_00633 SM00382 ATPases associated with a variety of cellular activities S101392_00636 SM00347 helix_turn_helix multiple antibiotic resistance protein S101392_00639 SM00347 helix_turn_helix multiple antibiotic resistance protein S101392_00639 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor S101392_00642 SM00345 helix_turn_helix gluconate operon transcriptional repressor S101392_00642 SM00895 S101392_00642 S101392_00643 SM00257 Lysin motif S101392_00643 SM00636 S101392_00643 S101392_00646 SM00098 Alkaline phosphatase homologues S101392_00650 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. S101392_00657 SM00345 helix_turn_helix gluconate operon transcriptional repressor S101392_00657 SM00866 S101392_00657 S101392_00674 SM00382 ATPases associated with a variety of cellular activities S101392_00676 SM00881 CoA binding domain S101392_00681 SM00883 Chaperonin 10 Kd subunit S101392_00684 SM00028 Tetratricopeptide repeats S101392_00684 SM00382 ATPases associated with a variety of cellular activities S101392_00685 SM00829 Enoylreductase S101392_00694 SM00829 Enoylreductase S101392_00706 SM00460 Transglutaminase/protease-like homologues S101392_00715 SM01001 AIR carboxylase S101392_00717 SM00998 Adenylosuccinate lyase C-terminus S101392_00720 SM01211 S101392_00720 S101392_00725 SM00798 AICARFT/IMPCHase bienzyme S101392_00725 SM00851 MGS-like domain S101392_00726 SM01209 S101392_00726 S101392_00726 SM01210 S101392_00726 S101392_00727 SM00344 helix_turn_helix ASNC type S101392_00737 SM00278 Helix-hairpin-helix DNA-binding motif class 1 S101392_00737 SM00292 breast cancer carboxy-terminal domain S101392_00737 SM00532 Ligase N family S101392_00744 SM00845 GatB domain S101392_00747 SM00046 Diacylglycerol kinase catalytic domain (presumed) S101392_00757 SM00028 Tetratricopeptide repeats S101392_00771 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain S101392_00771 SM00387 Histidine kinase-like ATPases S101392_00772 SM00342 helix_turn_helix, arabinose operon control protein S101392_00772 SM00448 cheY-homologous receiver domain S101392_00777 SM00342 helix_turn_helix, arabinose operon control protein S101392_00797 SM00347 helix_turn_helix multiple antibiotic resistance protein S101392_00811 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). S101392_00812 SM00382 ATPases associated with a variety of cellular activities S101392_00814 SM00422 helix_turn_helix, mercury resistance S101392_00816 SM00382 ATPases associated with a variety of cellular activities S101392_00817 SM00487 DEAD-like helicases superfamily S101392_00817 SM00490 helicase superfamily c-terminal domain S101392_00819 SM00829 Enoylreductase S101392_00822 SM00382 ATPases associated with a variety of cellular activities S101392_00828 SM00656 S101392_00828 S101392_00830 SM00387 Histidine kinase-like ATPases S101392_00831 SM00448 cheY-homologous receiver domain S101392_00834 SM00849 Metallo-beta-lactamase superfamily S101392_00851 SM00642 Alpha-amylase domain S101392_00852 SM00345 helix_turn_helix gluconate operon transcriptional repressor S101392_00852 SM00866 S101392_00852 S101392_00858 SM00226 Low molecular weight phosphatase family S101392_00871 SM00478 endonuclease III S101392_00877 SM00861 Transketolase, pyrimidine binding domain S101392_00881 SM00382 ATPases associated with a variety of cellular activities S101392_00891 SM00382 ATPases associated with a variety of cellular activities S101392_00892 SM00382 ATPases associated with a variety of cellular activities S101392_00895 SM00342 helix_turn_helix, arabinose operon control protein S101392_00900 SM00387 Histidine kinase-like ATPases S101392_00901 SM00421 helix_turn_helix, Lux Regulon S101392_00901 SM00448 cheY-homologous receiver domain S101392_00902 SM00382 ATPases associated with a variety of cellular activities S101392_00912 SM00347 helix_turn_helix multiple antibiotic resistance protein S101392_00928 SM00287 Bacterial SH3 domain homologues S101392_00934 SM00478 endonuclease III S101392_00934 SM00525 S101392_00934 S101392_00940 SM00382 ATPases associated with a variety of cellular activities S101392_00972 SM01060 S101392_00972 S101392_00973 SM00382 ATPases associated with a variety of cellular activities S101392_00974 SM00062 Bacterial periplasmic substrate-binding proteins S101392_00980 SM00530 Helix-turn-helix XRE-family like proteins S101392_00983 SM00567 E-Z type HEAT repeats S101392_00989 SM00763 PrkA AAA domain S101392_00991 SM00347 helix_turn_helix multiple antibiotic resistance protein S101392_00998 SM00345 helix_turn_helix gluconate operon transcriptional repressor S101392_00999 SM00382 ATPases associated with a variety of cellular activities S101392_01000 SM00382 ATPases associated with a variety of cellular activities S101392_01002 SM00357 Cold shock protein domain S101392_01004 SM00267 diguanylate cyclase S101392_01010 SM00318 Staphylococcal nuclease homologues S101392_01012 SM00363 S4 RNA-binding domain S101392_01014 SM00116 Domain in cystathionine beta-synthase and other proteins. S101392_01023 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. S101392_01023 SM00387 Histidine kinase-like ATPases S101392_01024 SM00421 helix_turn_helix, Lux Regulon S101392_01024 SM00448 cheY-homologous receiver domain S101392_01028 SM00257 Lysin motif S101392_01032 SM00098 Alkaline phosphatase homologues S101392_01033 SM00257 Lysin motif S101392_01039 SM00345 helix_turn_helix gluconate operon transcriptional repressor S101392_01045 SM00563 Phosphate acyltransferases S101392_01046 SM01091 Transporter associated domain S101392_01047 SM00422 helix_turn_helix, mercury resistance S101392_01049 SM01091 Transporter associated domain S101392_01060 SM00382 ATPases associated with a variety of cellular activities S101392_01061 SM00382 ATPases associated with a variety of cellular activities S101392_01071 SM00729 Elongator protein 3, MiaB family, Radical SAM S101392_01077 SM00382 ATPases associated with a variety of cellular activities S101392_01081 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. S101392_01086 SM00347 helix_turn_helix multiple antibiotic resistance protein S101392_01091 SM00382 ATPases associated with a variety of cellular activities S101392_01107 SM01022 S101392_01107 S101392_01109 SM00849 Metallo-beta-lactamase superfamily S101392_01117 SM00829 Enoylreductase S101392_01119 SM00855 Phosphoglycerate mutase family S101392_01123 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). S101392_01126 SM00914 S101392_01126 S101392_01129 SM00894 Excalibur calcium-binding domain S101392_01136 SM00347 helix_turn_helix multiple antibiotic resistance protein S101392_01141 SM00354 helix_turn _helix lactose operon repressor S101392_01167 SM00342 helix_turn_helix, arabinose operon control protein S101392_01168 SM00354 helix_turn _helix lactose operon repressor S101392_01173 SM00345 helix_turn_helix gluconate operon transcriptional repressor S101392_01182 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain S101392_01188 SM00316 Ribosomal protein S1-like RNA-binding domain S101392_01190 SM00752 Horizontally Transferred TransMembrane Domain S101392_01207 SM00859 Semialdehyde dehydrogenase, NAD binding domain S101392_01211 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain S101392_01212 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain S101392_01222 SM00825 Beta-ketoacyl synthase S101392_01224 SM00382 ATPases associated with a variety of cellular activities S101392_01225 SM00382 ATPases associated with a variety of cellular activities S101392_01234 SM00382 ATPases associated with a variety of cellular activities S101392_01235 SM00382 ATPases associated with a variety of cellular activities S101392_01248 SM01118 S101392_01248 S101392_01250 SM00954 Region found in RelA / SpoT proteins S101392_01290 SM00635 Bacterial Ig-like domain 2 S101392_01307 SM00926 Molybdopterin oxidoreductase Fe4S4 domain S101392_01307 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region S101392_01317 SM00382 ATPases associated with a variety of cellular activities S101392_01319 SM00835 Cupin S101392_01325 SM00829 Enoylreductase S101392_01329 SM00354 helix_turn _helix lactose operon repressor S101392_01331 SM00858 S101392_01331 S101392_01334 SM00382 ATPases associated with a variety of cellular activities S101392_01335 SM00028 Tetratricopeptide repeats S101392_01338 SM00257 Lysin motif S101392_01338 SM00644 S101392_01338 S101392_01343 SM00530 Helix-turn-helix XRE-family like proteins S101392_01346 SM00382 ATPases associated with a variety of cellular activities S101392_01365 SM00257 Lysin motif S101392_01378 SM00257 Lysin motif S101392_01378 SM00644 S101392_01378 S101392_01389 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. S101392_01394 SM00382 ATPases associated with a variety of cellular activities S101392_01398 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain S101392_01400 SM00382 ATPases associated with a variety of cellular activities S101392_01412 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase S101392_01415 SM00347 helix_turn_helix multiple antibiotic resistance protein S101392_01423 SM00382 ATPases associated with a variety of cellular activities S101392_01426 SM00448 cheY-homologous receiver domain S101392_01426 SM00862 Transcriptional regulatory protein, C terminal S101392_01427 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain S101392_01427 SM00387 Histidine kinase-like ATPases S101392_01427 SM00388 His Kinase A (phosphoacceptor) domain S101392_01432 SM00116 Domain in cystathionine beta-synthase and other proteins. S101392_01432 SM00924 MgtE intracellular N domain S101392_01433 SM00422 helix_turn_helix, mercury resistance S101392_01436 SM00347 helix_turn_helix multiple antibiotic resistance protein S101392_01443 SM00559 Ku70 and Ku80 are 70kDa and 80kDa subunits of the Lupus Ku autoantigen S101392_01444 SM00052 Putative diguanylate phosphodiesterase S101392_01444 SM00267 diguanylate cyclase S101392_01456 SM00091 PAS domain S101392_01456 SM00387 Histidine kinase-like ATPases S101392_01456 SM00388 His Kinase A (phosphoacceptor) domain S101392_01465 SM01007 Class II Aldolase and Adducin N-terminal domain S101392_01470 SM00387 Histidine kinase-like ATPases S101392_01470 SM00388 His Kinase A (phosphoacceptor) domain S101392_01471 SM00347 helix_turn_helix multiple antibiotic resistance protein S101392_01474 SM00382 ATPases associated with a variety of cellular activities S101392_01474 SM01086 C-terminal, D2-small domain, of ClpB protein S101392_01481 SM00822 S101392_01481 S101392_01482 SM00257 Lysin motif S101392_01483 SM00257 Lysin motif S101392_01484 SM00636 S101392_01484 S101392_01494 SM00354 helix_turn _helix lactose operon repressor S101392_01496 SM01061 CAT RNA binding domain S101392_01503 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). S101392_01503 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain S101392_01507 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) S101392_01507 SM00091 PAS domain S101392_01507 SM00387 Histidine kinase-like ATPases S101392_01507 SM00388 His Kinase A (phosphoacceptor) domain S101392_01510 SM00260 Two component signalling adaptor domain S101392_01510 SM00448 cheY-homologous receiver domain S101392_01513 SM00257 Lysin motif S101392_01516 SM00052 Putative diguanylate phosphodiesterase S101392_01535 SM00852 Probable molybdopterin binding domain S101392_01539 SM00382 ATPases associated with a variety of cellular activities S101392_01540 SM00382 ATPases associated with a variety of cellular activities S101392_01543 SM00382 ATPases associated with a variety of cellular activities S101392_01544 SM01066 Carbohydrate binding domain S101392_01545 SM00420 helix_turn_helix, Deoxyribose operon repressor S101392_01545 SM01134 S101392_01545 S101392_01550 SM00382 ATPases associated with a variety of cellular activities S101392_01555 SM00966 SpoVT / AbrB like domain S101392_01556 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) S101392_01556 SM00091 PAS domain S101392_01556 SM00387 Histidine kinase-like ATPases S101392_01556 SM00388 His Kinase A (phosphoacceptor) domain S101392_01560 SM00849 Metallo-beta-lactamase superfamily S101392_01567 SM00861 Transketolase, pyrimidine binding domain S101392_01586 SM00838 Elongation factor G C-terminus S101392_01590 SM00670 Large family of predicted nucleotide-binding domains S101392_01595 SM00878 Biotin carboxylase C-terminal domain S101392_01604 SM00116 Domain in cystathionine beta-synthase and other proteins. S101392_01614 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. S101392_01626 SM00740 S101392_01626 S101392_01627 SM00740 S101392_01627 S101392_01638 SM00842 Cell division protein FtsA S101392_01639 SM00864 Tubulin/FtsZ family, GTPase domain S101392_01639 SM00865 Tubulin/FtsZ family, C-terminal domain S101392_01644 SM00382 ATPases associated with a variety of cellular activities S101392_01651 SM00363 S4 RNA-binding domain S101392_01656 SM00363 S4 RNA-binding domain S101392_01661 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain S101392_01662 SM00851 MGS-like domain S101392_01662 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain S101392_01662 SM01209 S101392_01662 S101392_01665 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family S101392_01675 SM00831 Cation transporter/ATPase, N-terminus S101392_01678 SM00072 Guanylate kinase homologues. S101392_01679 SM01409 S101392_01679 S101392_01681 SM00487 DEAD-like helicases superfamily S101392_01681 SM00490 helicase superfamily c-terminal domain S101392_01686 SM00331 Sigma factor PP2C-like phosphatases S101392_01686 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain S101392_01687 SM00220 Serine/Threonine protein kinases, catalytic domain S101392_01687 SM00740 S101392_01687 S101392_01690 SM00983 Thiamin pyrophosphokinase, vitamin B1 binding domain S101392_01693 SM01120 S101392_01693 S101392_01693 SM01121 S101392_01693 S101392_01696 SM00487 DEAD-like helicases superfamily S101392_01696 SM00490 helicase superfamily c-terminal domain S101392_01699 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. S101392_01700 SM00822 S101392_01700 S101392_01702 SM00358 Double-stranded RNA binding motif S101392_01702 SM00535 Ribonuclease III family S101392_01703 SM00968 SMC proteins Flexible Hinge Domain S101392_01704 SM00382 ATPases associated with a variety of cellular activities S101392_01704 SM00962 SRP54-type protein, GTPase domain S101392_01704 SM00963 SRP54-type protein, helical bundle domain S101392_01707 SM00382 ATPases associated with a variety of cellular activities S101392_01707 SM00962 SRP54-type protein, GTPase domain S101392_01707 SM00963 SRP54-type protein, helical bundle domain S101392_01719 SM00881 CoA binding domain S101392_01721 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain S101392_01721 SM00437 Bacterial DNA topoisomerase I DNA-binding domain S101392_01721 SM00493 S101392_01721 S101392_01725 SM00382 ATPases associated with a variety of cellular activities S101392_01725 SM01086 C-terminal, D2-small domain, of ClpB protein S101392_01733 SM00382 ATPases associated with a variety of cellular activities S101392_01742 SM00448 cheY-homologous receiver domain S101392_01749 SM00962 SRP54-type protein, GTPase domain S101392_01751 SM00448 cheY-homologous receiver domain S101392_01752 SM00073 Histidine Phosphotransfer domain S101392_01752 SM00260 Two component signalling adaptor domain S101392_01752 SM00387 Histidine kinase-like ATPases S101392_01752 SM01231 S101392_01752 S101392_01753 SM00260 Two component signalling adaptor domain S101392_01765 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. S101392_01767 SM00479 S101392_01767 S101392_01767 SM00481 DNA polymerase alpha chain like domain S101392_01769 SM00316 Ribosomal protein S1-like RNA-binding domain S101392_01769 SM00322 K homology RNA-binding domain S101392_01777 SM00904 Riboflavin kinase S101392_01778 SM01387 S101392_01778 S101392_01779 SM00316 Ribosomal protein S1-like RNA-binding domain S101392_01779 SM00322 K homology RNA-binding domain S101392_01785 SM00859 Semialdehyde dehydrogenase, NAD binding domain S101392_01787 SM01130 S101392_01787 S101392_01788 SM00849 Metallo-beta-lactamase superfamily S101392_01791 SM00382 ATPases associated with a variety of cellular activities S101392_01791 SM00843 S101392_01791 S101392_01792 SM00345 helix_turn_helix gluconate operon transcriptional repressor S101392_01792 SM00866 S101392_01792 S101392_01799 SM00530 Helix-turn-helix XRE-family like proteins S101392_01801 SM00852 Probable molybdopterin binding domain S101392_01802 SM00382 ATPases associated with a variety of cellular activities S101392_01804 SM00322 K homology RNA-binding domain S101392_01804 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. S101392_01807 SM00829 Enoylreductase S101392_01809 SM00729 Elongator protein 3, MiaB family, Radical SAM S101392_01812 SM00533 DNA-binding domain of DNA mismatch repair MUTS family S101392_01812 SM00534 ATPase domain of DNA mismatch repair MUTS family S101392_01813 SM00853 MutL C terminal dimerisation domain S101392_01813 SM01340 S101392_01813 S101392_01818 SM00849 Metallo-beta-lactamase superfamily S101392_01819 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. S101392_01821 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. S101392_01822 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. S101392_01824 SM00825 Beta-ketoacyl synthase S101392_01828 SM00822 S101392_01828 S101392_01828 SM00823 Phosphopantetheine attachment site S101392_01828 SM00825 Beta-ketoacyl synthase S101392_01828 SM00826 S101392_01828 S101392_01828 SM01294 S101392_01828 S101392_01829 SM00822 S101392_01829 S101392_01829 SM00823 Phosphopantetheine attachment site S101392_01829 SM00825 Beta-ketoacyl synthase S101392_01829 SM00826 S101392_01829 S101392_01829 SM01294 S101392_01829 S101392_01830 SM00822 S101392_01830 S101392_01830 SM00823 Phosphopantetheine attachment site S101392_01830 SM00825 Beta-ketoacyl synthase S101392_01830 SM00826 S101392_01830 S101392_01830 SM01294 S101392_01830 S101392_01831 SM00822 S101392_01831 S101392_01831 SM00823 Phosphopantetheine attachment site S101392_01831 SM00825 Beta-ketoacyl synthase S101392_01831 SM00826 S101392_01831 S101392_01831 SM01294 S101392_01831 S101392_01832 SM00823 Phosphopantetheine attachment site S101392_01832 SM00825 Beta-ketoacyl synthase S101392_01832 SM01294 S101392_01832 S101392_01835 SM00849 Metallo-beta-lactamase superfamily S101392_01852 SM00646 S101392_01852 S101392_01853 SM00382 ATPases associated with a variety of cellular activities S101392_01856 SM00422 helix_turn_helix, mercury resistance S101392_01857 SM01230 S101392_01857 S101392_01860 SM00530 Helix-turn-helix XRE-family like proteins S101392_01869 SM00382 ATPases associated with a variety of cellular activities S101392_01882 SM00507 HNH nucleases S101392_01900 SM00047 Lysozyme subfamily 2 S101392_01908 SM00257 Lysin motif S101392_01908 SM00644 S101392_01908 S101392_01909 SM00860 SMI1 / KNR4 family S101392_01911 SM00028 Tetratricopeptide repeats S101392_01919 SM00530 Helix-turn-helix XRE-family like proteins S101392_01920 SM00530 Helix-turn-helix XRE-family like proteins S101392_01964 SM00257 Lysin motif S101392_01964 SM00644 S101392_01964 S101392_01973 SM00028 Tetratricopeptide repeats S101392_01990 SM00318 Staphylococcal nuclease homologues S101392_01992 SM01005 Alanine racemase, C-terminal domain S101392_02019 SM00257 Lysin motif S101392_02020 SM00857 Resolvase, N terminal domain S101392_02022 SM00861 Transketolase, pyrimidine binding domain S101392_02027 SM00448 cheY-homologous receiver domain S101392_02041 SM01207 S101392_02041 S101392_02042 SM00881 CoA binding domain S101392_02043 SM00387 Histidine kinase-like ATPases S101392_02043 SM00433 TopoisomeraseII S101392_02044 SM00434 DNA Topoisomerase IV S101392_02048 SM01067 Cellulose binding domain S101392_02051 SM00606 Cellulose Binding Domain Type IV S101392_02060 SM00878 Biotin carboxylase C-terminal domain S101392_02065 SM00823 Phosphopantetheine attachment site S101392_02065 SM00824 Thioesterase S101392_02066 SM00823 Phosphopantetheine attachment site S101392_02067 SM00823 Phosphopantetheine attachment site S101392_02068 SM00823 Phosphopantetheine attachment site S101392_02069 SM00823 Phosphopantetheine attachment site S101392_02079 SM00829 Enoylreductase S101392_02083 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase S101392_02086 SM00822 S101392_02086 S101392_02093 SM00926 Molybdopterin oxidoreductase Fe4S4 domain S101392_02098 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). S101392_02098 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain S101392_02102 SM00656 S101392_02102 S101392_02105 SM00835 Cupin S101392_02113 SM00530 Helix-turn-helix XRE-family like proteins S101392_02126 SM00530 Helix-turn-helix XRE-family like proteins S101392_02154 SM00860 SMI1 / KNR4 family S101392_02157 SM00342 helix_turn_helix, arabinose operon control protein S101392_02160 SM00849 Metallo-beta-lactamase superfamily S101392_02161 SM00871 Bacterial transcription activator, effector binding domain S101392_02164 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor S101392_02172 SM00421 helix_turn_helix, Lux Regulon S101392_02172 SM00448 cheY-homologous receiver domain S101392_02174 SM00257 Lysin motif S101392_02175 SM00341 Helicase and RNase D C-terminal S101392_02175 SM00487 DEAD-like helicases superfamily S101392_02175 SM00490 helicase superfamily c-terminal domain S101392_02175 SM00956 S101392_02175 S101392_02191 SM00861 Transketolase, pyrimidine binding domain S101392_02192 SM00327 von Willebrand factor (vWF) type A domain S101392_02193 SM00382 ATPases associated with a variety of cellular activities S101392_02195 SM00257 Lysin motif S101392_02215 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. S101392_02215 SM00245 tail specific protease S101392_02222 SM00014 Acid phosphatase homologues S101392_02231 SM00882 Coenzyme A transferase S101392_02232 SM00882 Coenzyme A transferase S101392_02244 SM00347 helix_turn_helix multiple antibiotic resistance protein S101392_02252 SM00382 ATPases associated with a variety of cellular activities S101392_02262 SM00567 E-Z type HEAT repeats S101392_02262 SM00932 Scaffold protein Nfu/NifU N terminal S101392_02263 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. S101392_02268 SM00357 Cold shock protein domain S101392_02276 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs S101392_02276 SM00475 5'-3' exonuclease S101392_02289 SM00354 helix_turn _helix lactose operon repressor S101392_02292 SM00491 S101392_02292 S101392_02294 SM00981 S101392_02294 S101392_02298 SM00487 DEAD-like helicases superfamily S101392_02298 SM00490 helicase superfamily c-terminal domain S101392_02310 SM00478 endonuclease III S101392_02310 SM00525 S101392_02310 S101392_02316 SM00479 S101392_02316 S101392_02316 SM00487 DEAD-like helicases superfamily S101392_02316 SM00491 S101392_02316 S101392_02324 SM00851 MGS-like domain S101392_02334 SM00914 S101392_02334 S101392_02335 SM00028 Tetratricopeptide repeats S101392_02348 SM00138 Methyltransferase, chemotaxis proteins S101392_02349 SM00562 S101392_02349 S101392_02355 SM00411 bacterial (prokaryotic) histone like domain S101392_02365 SM01240 S101392_02365 S101392_02366 SM00316 Ribosomal protein S1-like RNA-binding domain S101392_02374 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase S101392_02378 SM00257 Lysin motif S101392_02380 SM00487 DEAD-like helicases superfamily S101392_02380 SM00490 helicase superfamily c-terminal domain S101392_02388 SM00091 PAS domain S101392_02388 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain S101392_02388 SM00387 Histidine kinase-like ATPases S101392_02388 SM00388 His Kinase A (phosphoacceptor) domain S101392_02389 SM00448 cheY-homologous receiver domain S101392_02389 SM00862 Transcriptional regulatory protein, C terminal S101392_02393 SM00363 S4 RNA-binding domain S101392_02396 SM00936 Penicillin-binding protein 5, C-terminal domain S101392_02424 SM00387 Histidine kinase-like ATPases S101392_02426 SM00936 Penicillin-binding protein 5, C-terminal domain S101392_02434 SM00919 Malic enzyme, NAD binding domain S101392_02434 SM01274 S101392_02434 S101392_02437 SM00870 S101392_02437 S101392_02438 SM00530 Helix-turn-helix XRE-family like proteins S101392_02459 SM00849 Metallo-beta-lactamase superfamily S101392_02465 SM00849 Metallo-beta-lactamase superfamily S101392_02467 SM01350 S101392_02467 S101392_02475 SM00825 Beta-ketoacyl synthase S101392_02477 SM00822 S101392_02477 S101392_02488 SM00382 ATPases associated with a variety of cellular activities S101392_02490 SM00062 Bacterial periplasmic substrate-binding proteins S101392_02490 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. S101392_02492 SM00046 Diacylglycerol kinase catalytic domain (presumed) S101392_02494 SM00422 helix_turn_helix, mercury resistance S101392_02496 SM00861 Transketolase, pyrimidine binding domain S101392_02500 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase S101392_02502 SM00091 PAS domain S101392_02502 SM00382 ATPases associated with a variety of cellular activities S101392_02511 SM00646 S101392_02511 S101392_02514 SM00448 cheY-homologous receiver domain S101392_02515 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. S101392_02518 SM00363 S4 RNA-binding domain S101392_02519 SM00861 Transketolase, pyrimidine binding domain S101392_02526 SM00878 Biotin carboxylase C-terminal domain S101392_02535 SM00382 ATPases associated with a variety of cellular activities S101392_02537 SM00841 Elongation factor P, C-terminal S101392_02537 SM01185 S101392_02537 S101392_02544 SM00529 Helix-turn-helix diphteria tox regulatory element S101392_02546 SM00450 Rhodanese Homology Domain S101392_02550 SM00487 DEAD-like helicases superfamily S101392_02550 SM00490 helicase superfamily c-terminal domain S101392_02553 SM00530 Helix-turn-helix XRE-family like proteins S101392_02565 SM00382 ATPases associated with a variety of cellular activities S101392_02569 SM01091 Transporter associated domain S101392_02574 SM00849 Metallo-beta-lactamase superfamily S101392_02578 SM00631 S101392_02578 S101392_02582 SM00028 Tetratricopeptide repeats S101392_02590 SM00382 ATPases associated with a variety of cellular activities S101392_02591 SM00382 ATPases associated with a variety of cellular activities S101392_02600 SM00257 Lysin motif S101392_02607 SM00518 AP endonuclease family 2 S101392_02608 SM00487 DEAD-like helicases superfamily S101392_02608 SM00490 helicase superfamily c-terminal domain S101392_02615 SM00400 zinc finger S101392_02615 SM00493 S101392_02615 S101392_02618 SM00116 Domain in cystathionine beta-synthase and other proteins. S101392_02627 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. S101392_02638 SM00729 Elongator protein 3, MiaB family, Radical SAM S101392_02641 SM00271 DnaJ molecular chaperone homology domain S101392_02645 SM00729 Elongator protein 3, MiaB family, Radical SAM S101392_02646 SM00838 Elongation factor G C-terminus S101392_02654 SM00849 Metallo-beta-lactamase superfamily S101392_02656 SM00278 Helix-hairpin-helix DNA-binding motif class 1 S101392_02661 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. S101392_02663 SM01103 S101392_02663 S101392_02670 SM00644 S101392_02670 S101392_02672 SM01350 S101392_02672 S101392_02676 SM00347 helix_turn_helix multiple antibiotic resistance protein S101392_02678 SM00857 Resolvase, N terminal domain S101392_02683 SM00028 Tetratricopeptide repeats S101392_02689 SM00860 SMI1 / KNR4 family S101392_02691 SM00644 S101392_02691 S101392_02714 SM00450 Rhodanese Homology Domain S101392_02714 SM00849 Metallo-beta-lactamase superfamily S101392_02715 SM00450 Rhodanese Homology Domain S101392_02719 SM00422 helix_turn_helix, mercury resistance S101392_02722 SM01091 Transporter associated domain S101392_02734 SM00344 helix_turn_helix ASNC type S101392_02755 SM00287 Bacterial SH3 domain homologues S101392_02764 SM00422 helix_turn_helix, mercury resistance S101392_02766 SM00829 Enoylreductase S101392_02768 SM00640 Glycosyl hydrolases family 32 S101392_02773 SM00382 ATPases associated with a variety of cellular activities S101392_02789 SM00926 Molybdopterin oxidoreductase Fe4S4 domain S101392_02789 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region S101392_02795 SM00650 Ribosomal RNA adenine dimethylases S101392_02806 SM00732 Likely ribonuclease with RNase H fold. S101392_02808 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain S101392_02810 SM00382 ATPases associated with a variety of cellular activities S101392_02811 SM00062 Bacterial periplasmic substrate-binding proteins S101392_02811 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. S101392_02817 SM00382 ATPases associated with a variety of cellular activities S101392_02818 SM00028 Tetratricopeptide repeats S101392_02822 SM00382 ATPases associated with a variety of cellular activities S101392_02827 SM00287 Bacterial SH3 domain homologues S101392_02827 SM00646 S101392_02827 S101392_02829 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. S101392_02829 SM00954 Region found in RelA / SpoT proteins S101392_02839 SM01323 S101392_02839 S101392_02843 SM00382 ATPases associated with a variety of cellular activities S101392_02844 SM00278 Helix-hairpin-helix DNA-binding motif class 1 S101392_02854 SM00257 Lysin motif S101392_02863 SM01317 S101392_02863 S101392_02882 SM00257 Lysin motif S101392_02884 SM01004 Delta-aminolevulinic acid dehydratase S101392_02891 SM00382 ATPases associated with a variety of cellular activities S101392_02891 SM00464 Found in ATP-dependent protease La (LON) S101392_02892 SM00382 ATPases associated with a variety of cellular activities S101392_02893 SM00382 ATPases associated with a variety of cellular activities S101392_02893 SM00994 ClpX C4-type zinc finger S101392_02893 SM01086 C-terminal, D2-small domain, of ClpB protein S101392_02898 SM01329 S101392_02898 S101392_02899 SM00917 LeuA allosteric (dimerisation) domain S101392_02910 SM00909 Sporulation and spore germination S101392_02912 SM00347 helix_turn_helix multiple antibiotic resistance protein S101392_02913 SM00421 helix_turn_helix, Lux Regulon S101392_02920 SM00465 GIY-YIG type nucleases (URI domain) S101392_02922 SM00813 Alpha-L-arabinofuranosidase C-terminus S101392_02923 SM00893 Electron transfer flavoprotein domain S101392_02924 SM00893 Electron transfer flavoprotein domain S101392_02929 SM00463 Small MutS-related domain S101392_02929 SM00533 DNA-binding domain of DNA mismatch repair MUTS family S101392_02929 SM00534 ATPase domain of DNA mismatch repair MUTS family S101392_02930 SM00278 Helix-hairpin-helix DNA-binding motif class 1 S101392_02930 SM00481 DNA polymerase alpha chain like domain S101392_02930 SM00483 DNA polymerase X family S101392_02934 SM00873 B3/4 domain S101392_02934 SM00874 tRNA synthetase B5 domain S101392_02934 SM00896 Ferredoxin-fold anticodon binding domain S101392_02936 SM00967 RNA 2'-O ribose methyltransferase substrate binding S101392_02943 SM00813 Alpha-L-arabinofuranosidase C-terminus S101392_02949 SM01007 Class II Aldolase and Adducin N-terminal domain S101392_02962 SM00448 cheY-homologous receiver domain S101392_02962 SM00850 LytTr DNA-binding domain S101392_02963 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. S101392_02963 SM00387 Histidine kinase-like ATPases S101392_02965 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain S101392_02968 SM00382 ATPases associated with a variety of cellular activities S101392_02972 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain S101392_02978 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain S101392_02978 SM01232 S101392_02978 S101392_02979 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs S101392_02979 SM00474 3'-5' exonuclease S101392_02979 SM00475 5'-3' exonuclease S101392_02979 SM00482 DNA polymerase A domain S101392_02980 SM00091 PAS domain S101392_02980 SM00387 Histidine kinase-like ATPases S101392_02980 SM00388 His Kinase A (phosphoacceptor) domain S101392_02981 SM00448 cheY-homologous receiver domain S101392_02981 SM00862 Transcriptional regulatory protein, C terminal S101392_02983 SM01329 S101392_02983 S101392_02992 SM00919 Malic enzyme, NAD binding domain S101392_02992 SM01274 S101392_02992 S101392_02993 SM00481 DNA polymerase alpha chain like domain S101392_02999 SM00116 Domain in cystathionine beta-synthase and other proteins. S101392_03002 SM00904 Riboflavin kinase S101392_03006 SM00382 ATPases associated with a variety of cellular activities S101392_03009 SM00062 Bacterial periplasmic substrate-binding proteins S101392_03010 SM00062 Bacterial periplasmic substrate-binding proteins S101392_03013 SM00849 Metallo-beta-lactamase superfamily S101392_03018 SM00852 Probable molybdopterin binding domain S101392_03030 SM00981 S101392_03030 S101392_03036 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. S101392_03037 SM00267 diguanylate cyclase S101392_03038 SM00363 S4 RNA-binding domain S101392_03038 SM01390 S101392_03038 S101392_03040 SM00363 S4 RNA-binding domain S101392_03043 SM00116 Domain in cystathionine beta-synthase and other proteins. S101392_03047 SM00354 helix_turn _helix lactose operon repressor S101392_03048 SM00830 Chorismate mutase type II S101392_03053 SM00382 ATPases associated with a variety of cellular activities S101392_03053 SM00843 S101392_03053 S101392_03060 SM00919 Malic enzyme, NAD binding domain S101392_03060 SM01274 S101392_03060 S101392_03061 SM00849 Metallo-beta-lactamase superfamily S101392_03065 SM00642 Alpha-amylase domain S101392_03066 SM00046 Diacylglycerol kinase catalytic domain (presumed) S101392_03073 SM00382 ATPases associated with a variety of cellular activities S101392_03074 SM00420 helix_turn_helix, Deoxyribose operon repressor S101392_03075 SM00363 S4 RNA-binding domain S101392_03085 SM00342 helix_turn_helix, arabinose operon control protein S101392_03090 SM00729 Elongator protein 3, MiaB family, Radical SAM S101392_03090 SM00876 Biotin and Thiamin Synthesis associated domain S101392_03096 SM00354 helix_turn _helix lactose operon repressor S101392_03101 SM00450 Rhodanese Homology Domain S101392_03104 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) S101392_03108 SM00382 ATPases associated with a variety of cellular activities S101392_03109 SM00387 Histidine kinase-like ATPases S101392_03110 SM00448 cheY-homologous receiver domain S101392_03110 SM00862 Transcriptional regulatory protein, C terminal S101392_03112 SM00382 ATPases associated with a variety of cellular activities S101392_03115 SM00382 ATPases associated with a variety of cellular activities S101392_03116 SM00345 helix_turn_helix gluconate operon transcriptional repressor S101392_03119 SM00729 Elongator protein 3, MiaB family, Radical SAM S101392_03131 SM00382 ATPases associated with a variety of cellular activities S101392_03139 SM00947 Carbonic anhydrase S101392_03146 SM00382 ATPases associated with a variety of cellular activities S101392_03148 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain S101392_03156 SM00984 UDP binding domain S101392_03168 SM00642 Alpha-amylase domain S101392_03195 SM00244 prohibitin homologues S101392_03206 SM00047 Lysozyme subfamily 2 S101392_03216 SM00420 helix_turn_helix, Deoxyribose operon repressor S101392_03216 SM01134 S101392_03216 S101392_03217 SM01007 Class II Aldolase and Adducin N-terminal domain S101392_03218 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). S101392_03218 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain S101392_03218 SM00319 Homologues of the ligand binding domain of Tar S101392_03219 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). S101392_03219 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain S101392_03219 SM00319 Homologues of the ligand binding domain of Tar S101392_03220 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). S101392_03220 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain S101392_03220 SM00319 Homologues of the ligand binding domain of Tar S101392_03221 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). S101392_03221 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain S101392_03221 SM00319 Homologues of the ligand binding domain of Tar S101392_03225 SM00642 Alpha-amylase domain S101392_03226 SM01091 Transporter associated domain S101392_03237 SM00316 Ribosomal protein S1-like RNA-binding domain S101392_03239 SM00344 helix_turn_helix ASNC type S101392_03243 SM00387 Histidine kinase-like ATPases S101392_03243 SM00388 His Kinase A (phosphoacceptor) domain S101392_03244 SM01298 S101392_03244 S101392_03245 SM00479 S101392_03245 S101392_03251 SM00091 PAS domain S101392_03251 SM00387 Histidine kinase-like ATPases S101392_03252 SM00448 cheY-homologous receiver domain S101392_03254 SM00382 ATPases associated with a variety of cellular activities S101392_03267 SM00421 helix_turn_helix, Lux Regulon S101392_03267 SM00448 cheY-homologous receiver domain S101392_03268 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. S101392_03268 SM00387 Histidine kinase-like ATPases S101392_03273 SM00052 Putative diguanylate phosphodiesterase S101392_03282 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. S101392_03291 SM01002 Alanine dehydrogenase/PNT, C-terminal domain S101392_03291 SM01003 Alanine dehydrogenase/PNT, N-terminal domain S101392_03293 SM00923 MbtH-like protein S101392_03294 SM00823 Phosphopantetheine attachment site S101392_03294 SM00824 Thioesterase S101392_03310 SM01240 S101392_03310 S101392_03330 SM00729 Elongator protein 3, MiaB family, Radical SAM S101392_03345 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain S101392_03353 SM00382 ATPases associated with a variety of cellular activities S101392_03354 SM00345 helix_turn_helix gluconate operon transcriptional repressor S101392_03354 SM00866 S101392_03354 S101392_03360 SM00465 GIY-YIG type nucleases (URI domain) S101392_03368 SM00382 ATPases associated with a variety of cellular activities S101392_03372 SM00382 ATPases associated with a variety of cellular activities S101392_03372 SM00930 S101392_03372 S101392_03375 SM00493 S101392_03375 S101392_03386 SM00347 helix_turn_helix multiple antibiotic resistance protein S101392_03392 SM00382 ATPases associated with a variety of cellular activities S101392_03397 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. S101392_03398 SM00448 cheY-homologous receiver domain S101392_03398 SM00862 Transcriptional regulatory protein, C terminal S101392_03399 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain S101392_03399 SM00387 Histidine kinase-like ATPases S101392_03399 SM00388 His Kinase A (phosphoacceptor) domain S101392_03406 SM00421 helix_turn_helix, Lux Regulon S101392_03406 SM00448 cheY-homologous receiver domain S101392_03407 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain S101392_03407 SM00387 Histidine kinase-like ATPases S101392_03414 SM00382 ATPases associated with a variety of cellular activities S101392_03419 SM00387 Histidine kinase-like ATPases S101392_03419 SM00388 His Kinase A (phosphoacceptor) domain S101392_03420 SM00448 cheY-homologous receiver domain S101392_03420 SM00862 Transcriptional regulatory protein, C terminal S101392_03424 SM00835 Cupin S101392_03427 SM00382 ATPases associated with a variety of cellular activities S101392_03429 SM00382 ATPases associated with a variety of cellular activities S101392_03462 SM00316 Ribosomal protein S1-like RNA-binding domain S101392_03462 SM00357 Cold shock protein domain S101392_03462 SM00955 S101392_03462 S101392_03466 SM00530 Helix-turn-helix XRE-family like proteins S101392_03467 SM00530 Helix-turn-helix XRE-family like proteins S101392_03468 SM00530 Helix-turn-helix XRE-family like proteins S101392_03470 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). S101392_03470 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain S101392_03474 SM00116 Domain in cystathionine beta-synthase and other proteins. S101392_03474 SM00382 ATPases associated with a variety of cellular activities S101392_03479 SM00116 Domain in cystathionine beta-synthase and other proteins. S101392_03479 SM00382 ATPases associated with a variety of cellular activities S101392_03494 SM00984 UDP binding domain S101392_03496 SM01192 S101392_03496 S101392_03496 SM01193 S101392_03496 S101392_03500 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain S101392_03503 SM00345 helix_turn_helix gluconate operon transcriptional repressor S101392_03508 SM00636 S101392_03508 S101392_03512 SM00421 helix_turn_helix, Lux Regulon S101392_03512 SM00448 cheY-homologous receiver domain S101392_03515 SM00382 ATPases associated with a variety of cellular activities S101392_03517 SM00331 Sigma factor PP2C-like phosphatases S101392_03523 SM00354 helix_turn _helix lactose operon repressor S101392_03524 SM00345 helix_turn_helix gluconate operon transcriptional repressor S101392_03524 SM00895 S101392_03524 S101392_03543 SM00530 Helix-turn-helix XRE-family like proteins S101392_03551 SM00640 Glycosyl hydrolases family 32 S101392_03562 SM00642 Alpha-amylase domain S101392_03568 SM00642 Alpha-amylase domain S101392_03569 SM00354 helix_turn _helix lactose operon repressor S101392_03573 SM00947 Carbonic anhydrase S101392_03576 SM00382 ATPases associated with a variety of cellular activities S101392_03577 SM00387 Histidine kinase-like ATPases S101392_03578 SM00448 cheY-homologous receiver domain S101392_03578 SM00862 Transcriptional regulatory protein, C terminal S101392_03588 SM00028 Tetratricopeptide repeats S101392_03589 SM00382 ATPases associated with a variety of cellular activities S101392_03610 SM00345 helix_turn_helix gluconate operon transcriptional repressor S101392_03610 SM00866 S101392_03610 S101392_03618 SM00382 ATPases associated with a variety of cellular activities S101392_03619 SM00487 DEAD-like helicases superfamily S101392_03619 SM00490 helicase superfamily c-terminal domain S101392_03624 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. S101392_03626 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. S101392_03626 SM00245 tail specific protease S101392_03628 SM00382 ATPases associated with a variety of cellular activities S101392_03631 SM00937 S101392_03631 S101392_03632 SM00957 SecA DEAD-like domain S101392_03632 SM00958 SecA preprotein cross-linking domain S101392_03650 SM00487 DEAD-like helicases superfamily S101392_03650 SM00490 helicase superfamily c-terminal domain S101392_03652 SM00421 helix_turn_helix, Lux Regulon S101392_03652 SM00448 cheY-homologous receiver domain S101392_03653 SM00387 Histidine kinase-like ATPases S101392_03661 SM00984 UDP binding domain S101392_03666 SM00646 S101392_03666 S101392_03675 SM00382 ATPases associated with a variety of cellular activities S101392_03687 SM00047 Lysozyme subfamily 2 S101392_03687 SM00287 Bacterial SH3 domain homologues S101392_03697 SM00854 Bacterial capsule synthesis protein PGA_cap S101392_03700 SM00354 helix_turn _helix lactose operon repressor S101392_03703 SM00382 ATPases associated with a variety of cellular activities S101392_03706 SM00287 Bacterial SH3 domain homologues S101392_03717 SM00903 Flavin reductase like domain S101392_03720 SM00344 helix_turn_helix ASNC type S101392_03732 SM00984 UDP binding domain S101392_03738 SM00487 DEAD-like helicases superfamily S101392_03738 SM00490 helicase superfamily c-terminal domain S101392_03740 SM00420 helix_turn_helix, Deoxyribose operon repressor S101392_03740 SM01134 S101392_03740 S101392_03746 SM00448 cheY-homologous receiver domain S101392_03746 SM00862 Transcriptional regulatory protein, C terminal S101392_03747 SM00387 Histidine kinase-like ATPases S101392_03747 SM00388 His Kinase A (phosphoacceptor) domain S101392_03747 SM00448 cheY-homologous receiver domain S101392_03750 SM00028 Tetratricopeptide repeats S101392_03755 SM00347 helix_turn_helix multiple antibiotic resistance protein S101392_03757 SM00710 Parallel beta-helix repeats S101392_03757 SM00722 Domain present in carbohydrate binding proteins and sugar hydrolses S101392_03763 SM00938 Nitrogen regulatory protein P-II S101392_03764 SM00014 Acid phosphatase homologues S101392_03770 SM00155 Phospholipase D. Active site motifs. S101392_03771 SM00422 helix_turn_helix, mercury resistance S101392_03781 SM00028 Tetratricopeptide repeats S101392_03782 SM00729 Elongator protein 3, MiaB family, Radical SAM S101392_03785 SM00327 von Willebrand factor (vWF) type A domain S101392_03786 SM00327 von Willebrand factor (vWF) type A domain S101392_03793 SM00382 ATPases associated with a variety of cellular activities S101392_03805 SM00226 Low molecular weight phosphatase family S101392_03813 SM00937 S101392_03813 S101392_03817 SM00919 Malic enzyme, NAD binding domain S101392_03817 SM01274 S101392_03817 S101392_03820 SM00357 Cold shock protein domain S101392_03820 SM00382 ATPases associated with a variety of cellular activities S101392_03820 SM00959 Rho termination factor, N-terminal domain S101392_03825 SM00448 cheY-homologous receiver domain S101392_03831 SM00155 Phospholipase D. Active site motifs. S101392_03835 SM00382 ATPases associated with a variety of cellular activities S101392_03836 SM00155 Phospholipase D. Active site motifs. S101392_03840 SM00926 Molybdopterin oxidoreductase Fe4S4 domain S101392_03843 SM00100 Cyclic nucleotide-monophosphate binding domain S101392_03843 SM00419 helix_turn_helix, cAMP Regulatory protein S101392_03845 SM00836 DALR anticodon binding domain S101392_03845 SM01016 Arginyl tRNA synthetase N terminal dom S101392_03848 SM00729 Elongator protein 3, MiaB family, Radical SAM S101392_03857 SM00028 Tetratricopeptide repeats S101392_03863 SM00382 ATPases associated with a variety of cellular activities S101392_03871 SM00347 helix_turn_helix multiple antibiotic resistance protein S101392_03872 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain S101392_03877 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. S101392_03896 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase S101392_03914 SM00986 Uracil DNA glycosylase superfamily S101392_03914 SM00987 UreE urease accessory protein, C-terminal domain S101392_03921 SM00640 Glycosyl hydrolases family 32 S101392_03924 SM01061 CAT RNA binding domain S101392_03954 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase S101392_03960 SM01061 CAT RNA binding domain S101392_03963 SM00347 helix_turn_helix multiple antibiotic resistance protein S101392_03964 SM00363 S4 RNA-binding domain S101392_03966 SM00530 Helix-turn-helix XRE-family like proteins S101392_03969 SM00954 Region found in RelA / SpoT proteins S101392_03985 SM01060 S101392_03985 S101392_03988 SM00382 ATPases associated with a variety of cellular activities S101392_03995 SM00382 ATPases associated with a variety of cellular activities S101392_03996 SM00382 ATPases associated with a variety of cellular activities S101392_04003 SM00382 ATPases associated with a variety of cellular activities S101392_04013 SM00421 helix_turn_helix, Lux Regulon S101392_04013 SM00448 cheY-homologous receiver domain S101392_04021 SM00882 Coenzyme A transferase S101392_04022 SM00882 Coenzyme A transferase S101392_04028 SM01060 S101392_04028 S101392_04031 SM01061 CAT RNA binding domain S101392_04034 SM00487 DEAD-like helicases superfamily S101392_04034 SM00490 helicase superfamily c-terminal domain S101392_04047 SM00860 SMI1 / KNR4 family S101392_04058 SM00941 Pyrimidine nucleoside phosphorylase C-terminal domain S101392_04060 SM01133 S101392_04060 S101392_04066 SM00382 ATPases associated with a variety of cellular activities S101392_04068 SM00062 Bacterial periplasmic substrate-binding proteins S101392_04081 SM00382 ATPases associated with a variety of cellular activities S101392_04082 SM00387 Histidine kinase-like ATPases S101392_04083 SM00448 cheY-homologous receiver domain S101392_04083 SM00862 Transcriptional regulatory protein, C terminal S101392_04094 SM00420 helix_turn_helix, Deoxyribose operon repressor S101392_04094 SM01134 S101392_04094 S101392_04099 SM00387 Histidine kinase-like ATPases S101392_04106 SM00564 beta-propeller repeat S101392_04113 SM00347 helix_turn_helix multiple antibiotic resistance protein S101392_04118 SM00345 helix_turn_helix gluconate operon transcriptional repressor S101392_04118 SM00895 S101392_04118 S101392_04121 SM01350 S101392_04121 S101392_04126 SM00345 helix_turn_helix gluconate operon transcriptional repressor S101392_04126 SM00866 S101392_04126 S101392_04128 SM00382 ATPases associated with a variety of cellular activities S101392_04145 SM00091 PAS domain S101392_04145 SM00382 ATPases associated with a variety of cellular activities S101392_04146 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain S101392_04146 SM00387 Histidine kinase-like ATPases S101392_04146 SM00388 His Kinase A (phosphoacceptor) domain S101392_04147 SM00448 cheY-homologous receiver domain S101392_04147 SM00862 Transcriptional regulatory protein, C terminal S101392_04150 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. S101392_04151 SM00849 Metallo-beta-lactamase superfamily S101392_04154 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) S101392_04154 SM00091 PAS domain S101392_04154 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain S101392_04154 SM00387 Histidine kinase-like ATPases S101392_04154 SM00388 His Kinase A (phosphoacceptor) domain S101392_04155 SM00448 cheY-homologous receiver domain S101392_04155 SM00862 Transcriptional regulatory protein, C terminal S101392_04160 SM00788 Adenylosuccinate synthetase S101392_04162 SM00382 ATPases associated with a variety of cellular activities S101392_04169 SM00267 diguanylate cyclase S101392_04174 SM01131 S101392_04174 S101392_04178 SM00422 helix_turn_helix, mercury resistance S101392_04186 SM00849 Metallo-beta-lactamase superfamily S101392_04187 SM00347 helix_turn_helix multiple antibiotic resistance protein S101392_04194 SM00382 ATPases associated with a variety of cellular activities S101392_04199 SM01266 S101392_04199 S101392_04201 SM00354 helix_turn _helix lactose operon repressor S101392_04207 SM00926 Molybdopterin oxidoreductase Fe4S4 domain S101392_04211 SM00470 ParB-like nuclease domain S101392_04214 SM00470 ParB-like nuclease domain S101392_04216 SM01228 S101392_04216 S101392_04218 SM00322 K homology RNA-binding domain S101392_04218 SM00393 Putative single-stranded nucleic acids-binding domain S101392_04218 SM01245 S101392_04218