locus-tag	class	description
D9C14_00010	COG1942	4-Oxalocrotonate Tautomerase
D9C14_00015	COG0583	DNA-binding transcription factor activity
D9C14_00025	COG1114	Component of the transport system for branched-chain amino acids
D9C14_00030	COG1687	branched-chain amino acid
D9C14_00035	COG1296	Branched-chain amino acid permease (Azaleucine resistance)
D9C14_00040	COG1522	sequence-specific DNA binding
D9C14_00050	COG2124	cytochrome p450
D9C14_00060	COG1335	isochorismatase
D9C14_00075	COG2318	DinB family
D9C14_00085	COG2070	2-Nitropropane dioxygenase
D9C14_00095	COG0796	Provides the (R)-glutamate required for cell wall biosynthesis
D9C14_00105	COG2186	Transcriptional regulator
D9C14_00120	COG1028	Short-chain dehydrogenase reductase Sdr
D9C14_00125	COG1154	Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP)
D9C14_00130	COG3959	Transketolase, thiamine diphosphate binding domain
D9C14_00145	COG0789	Transcriptional regulator
D9C14_00145	COG4978	Transcriptional regulator
D9C14_00150	COG2315	Protein conserved in bacteria
D9C14_00160	COG3443	Belongs to the bacterial solute-binding protein 9 family
D9C14_00165	COG1595	DNA-templated transcription, initiation
D9C14_00170	COG0667	Aldo Keto reductase
D9C14_00175	COG2851	Citrate transporter
D9C14_00180	COG0583	DNA-binding transcription factor activity
D9C14_00185	COG2828	Protein conserved in bacteria
D9C14_00190	COG3409	Peptidoglycan-binding domain 1 protein
D9C14_00195	COG5566	PFAM Mor transcription activator
D9C14_00200	COG0596	Alpha beta hydrolase
D9C14_00205	COG4991	sh3 domain protein
D9C14_00210	COG4991	sh3 domain protein
D9C14_00220	COG0346	lactoylglutathione lyase activity
D9C14_00230	COG5577	PFAM Coat F domain
D9C14_00235	COG1063	alcohol dehydrogenase
D9C14_00245	COG5577	PFAM Coat F domain
D9C14_00250	COG0789	Transcriptional regulator
D9C14_00260	COG1064	alcohol dehydrogenase
D9C14_00265	COG0693	protein deglycase activity
D9C14_00270	COG1621	beta-fructofuranosidase activity
D9C14_00275	COG3716	PTS system mannose fructose sorbose family IID component
D9C14_00280	COG3715	PTS system
D9C14_00285	COG3444	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
D9C14_00290	COG2893	phosphoenolpyruvate-dependent sugar phosphotransferase system
D9C14_00295	COG1221	Transcriptional regulators containing an AAA-type ATPase domain and a DNA-binding domain
D9C14_00295	COG3933	PFAM sigma-54 factor interaction domain-containing protein
D9C14_00305	COG1113	amino acid transport
D9C14_00310	COG1280	lysine exporter protein (LysE YggA)
D9C14_00315	COG1378	Sugar-specific transcriptional regulator TrmB
D9C14_00320	COG1595	DNA-templated transcription, initiation
D9C14_00340	COG0369	Component of the sulfite reductase complex that catalyzes the 6-electron reduction of sulfite to sulfide. This is one of several activities required for the biosynthesis of L- cysteine from sulfate. The flavoprotein component catalyzes the electron flow from NADPH - FAD - FMN to the hemoprotein component
D9C14_00340	COG2124	cytochrome p450
D9C14_00345	COG1309	transcriptional regulator
D9C14_00350	COG2226	methyltransferase
D9C14_00365	COG2116	formate transmembrane transporter activity
D9C14_00370	COG5609	conserved protein (DUF2294)
D9C14_00375	COG3383	formate dehydrogenase (NAD+) activity
D9C14_00380	COG2427	Protein of unknown function (DUF1641)
D9C14_00390	COG0626	cystathionine gamma-synthase activity
D9C14_00395	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
D9C14_00400	COG0775	Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
D9C14_00405	COG2226	methyltransferase
D9C14_00420	COG0768	penicillin binding
D9C14_00425	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
D9C14_00430	COG0572	uridine kinase
D9C14_00450	COG1559	Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
D9C14_00455	COG3906	Belongs to the UPF0473 family
D9C14_00460	COG0816	Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA
D9C14_00465	COG4472	Bacterial protein of unknown function (DUF965)
D9C14_00470	COG0013	Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
D9C14_00475	COG0628	permease
D9C14_00480	COG1126	abc transporter atp-binding protein
D9C14_00485	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
D9C14_00490	COG0765	amino acid transport
D9C14_00495	COG0765	amino acid transport
D9C14_00510	COG3881	PFAM PRC-barrel domain
D9C14_00515	COG0507	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD
D9C14_00520	COG0457	Tetratricopeptide repeat
D9C14_00525	COG0482	sulfurtransferase activity
D9C14_00530	COG1104	cysteine desulfurase activity
D9C14_00535	COG1959	2 iron, 2 sulfur cluster binding
D9C14_00540	COG2256	atpase related to the helicase subunit of the holliday junction resolvase
D9C14_00545	COG1179	involved in molybdopterin and THIamine biosynthesis family 1
D9C14_00555	COG0173	Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp Asn)
D9C14_00560	COG0124	histidyl-tRNA synthetase
D9C14_00570	COG3103	Sh3 type 3 domain protein
D9C14_00570	COG4991	sh3 domain protein
D9C14_00570	COG0860	N-Acetylmuramoyl-L-alanine amidase
D9C14_00575	COG1490	D-aminoacyl-tRNA deacylase activity
D9C14_00580	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
D9C14_00585	COG0503	Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
D9C14_00590	COG4199	Single-strand DNA-specific exonuclease, C terminal domain
D9C14_00590	COG0608	single-stranded DNA 5'-3' exodeoxyribonuclease activity
D9C14_00595	COG5416	Lipopolysaccharide assembly protein A domain
D9C14_00600	COG0490	domain, Protein
D9C14_00605	COG0341	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
D9C14_00605	COG0342	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
D9C14_00615	COG2244	polysaccharide biosynthetic process
D9C14_00620	COG2323	membrane
D9C14_00630	COG1862	Preprotein translocase
D9C14_00635	COG0343	queuine tRNA-ribosyltransferase activity
D9C14_00640	COG0809	Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA)
D9C14_00650	COG2255	four-way junction helicase activity
D9C14_00655	COG0632	four-way junction helicase activity
D9C14_00665	COG2814	Major facilitator Superfamily
D9C14_00670	COG0673	inositol 2-dehydrogenase activity
D9C14_00675	COG2112	serine threonine protein kinase
D9C14_00695	COG1115	amino acid carrier protein
D9C14_00700	COG0217	transcriptional regulatory protein
D9C14_00710	COG1388	LysM domain
D9C14_00715	COG0379	Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate
D9C14_00720	COG0157	Belongs to the NadC ModD family
D9C14_00725	COG0029	Catalyzes the oxidation of L-aspartate to iminoaspartate
D9C14_00730	COG1104	cysteine desulfurase activity
D9C14_00735	COG1827	regulation of RNA biosynthetic process
D9C14_00740	COG0077	Prephenate dehydratase
D9C14_00745	COG4492	Belongs to the UPF0735 family
D9C14_00750	COG0536	An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control
D9C14_00755	COG3290	protein histidine kinase activity
D9C14_00765	COG0211	Belongs to the bacterial ribosomal protein bL27 family
D9C14_00770	COG2868	ribosomal protein
D9C14_00775	COG0261	This protein binds to 23S rRNA in the presence of protein L20
D9C14_00780	COG1994	Peptidase M50
D9C14_00785	COG0739	heme binding
D9C14_00790	COG2894	cell division
D9C14_00795	COG0850	regulation of cytokinetic process
D9C14_00800	COG2891	Involved in formation of the rod shape of the cell. May also contribute to regulation of formation of penicillin-binding proteins
D9C14_00805	COG1792	Involved in formation and maintenance of cell shape
D9C14_00810	COG1077	Cell shape determining protein MreB Mrl
D9C14_00815	COG2003	Belongs to the UPF0758 family
D9C14_00820	COG0424	maF-like protein
D9C14_00830	COG1989	Cleaves type-4 fimbrial leader sequence and methylates the N-terminal (generally Phe) residue
D9C14_00835	COG0285	dihydrofolate synthase activity
D9C14_00840	COG0525	valine-tRNA ligase activity
D9C14_00850	COG2334	A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response
D9C14_00855	COG1388	LysM domain
D9C14_00860	COG0001	glutamate-1-semialdehyde 2,1-aminomutase activity
D9C14_00865	COG0113	porphobilinogen synthase activity
D9C14_00870	COG1587	Uroporphyrinogen-III synthase
D9C14_00875	COG0181	hydroxymethylbilane synthase activity
D9C14_00880	COG0755	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
D9C14_00885	COG0373	Catalyzes the NADPH-dependent reduction of glutamyl- tRNA(Glu) to glutamate 1-semialdehyde (GSA)
D9C14_00895	COG0218	Necessary for normal cell division and for the maintenance of normal septation
D9C14_00900	COG0466	ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner
D9C14_00905	COG0470	DNA polymerase III
D9C14_00905	COG1067	ATP-dependent peptidase activity
D9C14_00910	COG1219	ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP
D9C14_00915	COG0544	peptidyl-prolyl cis-trans isomerase activity
D9C14_00920	COG0457	Tetratricopeptide repeat
D9C14_00920	COG1477	protein flavinylation
D9C14_00925	COG0066	3-isopropylmalate dehydratase activity
D9C14_00930	COG0065	Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate
D9C14_00935	COG0473	3-isopropylmalate dehydrogenase activity
D9C14_00940	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
D9C14_00945	COG0059	Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate
D9C14_00950	COG0440	acetolactate synthase activity
D9C14_00955	COG0028	Belongs to the TPP enzyme family
D9C14_00965	COG0454	-acetyltransferase
D9C14_00970	COG3861	electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity
D9C14_00980	COG0622	Phosphoesterase
D9C14_00985	COG0127	Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions
D9C14_00990	COG0689	Phosphorolytic exoribonuclease that removes nucleotide residues following the -CCA terminus of tRNA and adds nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates
D9C14_00995	COG5401	PFAM Sporulation and spore germination
D9C14_01000	COG0796	Provides the (R)-glutamate required for cell wall biosynthesis
D9C14_01005	COG1846	Transcriptional regulator
D9C14_01015	COG1961	COG1961 Site-specific recombinases, DNA invertase Pin homologs
D9C14_01035	COG5632	N-Acetylmuramoyl-L-alanine amidase
D9C14_01035	COG3409	Peptidoglycan-binding domain 1 protein
D9C14_01035	COG1388	LysM domain
D9C14_01095	COG1388	LysM domain
D9C14_01095	COG0791	NLP P60 protein
D9C14_01100	COG3953	SLT domain
D9C14_01100	COG5280	Phage tail tape measure protein TP901
D9C14_01165	COG5484	DNA packaging
D9C14_01190	COG1595	DNA-templated transcription, initiation
D9C14_01250	COG1484	DNA-dependent DNA replication
D9C14_01255	COG3935	DnaD domain protein
D9C14_01260	COG3723	Recombinational DNA repair protein, rece pathway
D9C14_01265	COG5377	YqaJ viral recombinase family
D9C14_01295	COG3646	Phage regulatory protein
D9C14_01295	COG3645	SOS response
D9C14_01305	COG3620	sequence-specific DNA binding
D9C14_01315	COG2856	Zn peptidase
D9C14_01320	COG2197	response regulator
D9C14_01325	COG0824	Thioesterase
D9C14_01330	COG0479	Belongs to the succinate dehydrogenase fumarate reductase iron-sulfur protein family
D9C14_01335	COG1053	succinate dehydrogenase
D9C14_01340	COG2009	succinate dehydrogenase
D9C14_01345	COG1719	4-vinyl reductase, 4VR
D9C14_01350	COG0527	aspartate kinase activity
D9C14_01360	COG0322	excinuclease ABC activity
D9C14_01365	COG3118	belongs to the thioredoxin family
D9C14_01375	COG3534	alpha-L-arabinofuranosidase
D9C14_01380	COG2025	fatty acid beta-oxidation using acyl-CoA dehydrogenase
D9C14_01385	COG2086	electron transfer activity
D9C14_01390	COG1024	Enoyl-CoA hydratase
D9C14_01395	COG1309	transcriptional regulator
D9C14_01400	COG0318	PFAM AMP-dependent synthetase and ligase
D9C14_01405	COG3766	membrane
D9C14_01410	COG1193	negative regulation of DNA recombination
D9C14_01415	COG1796	DNA polymerase
D9C14_01415	COG1387	Histidinol phosphatase and related hydrolases of the PHP family
D9C14_01420	COG1286	toxin biosynthetic process
D9C14_01425	COG3027	Activator of cell division through the inhibition of FtsZ GTPase activity, therefore promoting FtsZ assembly into bundles of protofilaments necessary for the formation of the division Z ring. It is recruited early at mid-cell but it is not essential for cell division
D9C14_01430	COG1039	Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
D9C14_01435	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
D9C14_01435	COG0072	phenylalanine-tRNA ligase activity
D9C14_01440	COG0016	Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily
D9C14_01450	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
D9C14_01460	COG3835	regulator
D9C14_01465	COG0277	FAD linked oxidase domain protein
D9C14_01470	COG0247	lactate metabolic process
D9C14_01475	COG0346	lactoylglutathione lyase activity
D9C14_01485	COG1966	Carbon starvation protein
D9C14_01490	COG3534	alpha-L-arabinofuranosidase
D9C14_01495	COG0395	ABC-type sugar transport system, permease component
D9C14_01500	COG1175	transmembrane transport
D9C14_01505	COG1653	transport
D9C14_01510	COG0371	Dehydrogenase
D9C14_01515	COG0647	UMP catabolic process
D9C14_01520	COG0235	Class ii aldolase
D9C14_01525	COG1069	ribulokinase activity
D9C14_01530	COG2160	L-arabinose isomerase activity
D9C14_01535	COG3507	Belongs to the glycosyl hydrolase 43 family
D9C14_01540	COG1363	Peptidase, m42
D9C14_01550	COG3326	Membrane
D9C14_01555	COG0292	Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit
D9C14_01560	COG0291	Belongs to the bacterial ribosomal protein bL35 family
D9C14_01565	COG0290	IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins
D9C14_01575	COG1346	cytolysis
D9C14_01580	COG1380	Effector of murein hydrolase LrgA
D9C14_01585	COG3279	Response regulator of the LytR AlgR family
D9C14_01590	COG3275	phosphorelay sensor kinase activity
D9C14_01600	COG0441	Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
D9C14_01610	COG0398	Pfam SNARE associated Golgi protein
D9C14_01615	COG1484	DNA-dependent DNA replication
D9C14_01620	COG3611	Membrane attachment protein
D9C14_01625	COG1327	Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes
D9C14_01630	COG1586	Catalyzes the decarboxylation of S-adenosylmethionine to S-adenosylmethioninamine (dcAdoMet), the propylamine donor required for the synthesis of the polyamines spermine and spermidine from the diamine putrescine
D9C14_01635	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
D9C14_01640	COG1733	regulation of RNA biosynthetic process
D9C14_01645	COG2814	Major facilitator Superfamily
D9C14_01650	COG0656	L-ascorbic acid biosynthetic process
D9C14_01655	COG0237	dephospho-CoA kinase activity
D9C14_01660	COG1971	Probably functions as a manganese efflux pump
D9C14_01665	COG0266	class I DNA-(apurinic or apyrimidinic site) endonuclease activity
D9C14_01670	COG0258	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
D9C14_01670	COG0749	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
D9C14_01675	COG5002	protein histidine kinase activity
D9C14_01680	COG0745	RESPONSE REGULATOR receiver
D9C14_01685	COG0039	L-malate dehydrogenase activity
D9C14_01690	COG0538	isocitrate dehydrogenase activity
D9C14_01695	COG0372	Belongs to the citrate synthase family
D9C14_01700	COG2707	UPF0756 membrane protein
D9C14_01705	COG0628	permease
D9C14_01710	COG3030	protein affecting phage T7 exclusion by the F plasmid
D9C14_01715	COG0469	pyruvate kinase activity
D9C14_01720	COG0205	6-phosphofructokinase activity
D9C14_01725	COG0825	malonyl-CoA metabolic process
D9C14_01730	COG0777	Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA
D9C14_01735	COG0281	malic enzyme
D9C14_01740	COG0587	DNA-directed DNA polymerase activity
D9C14_01760	COG0618	3'(2'),5'-bisphosphate nucleotidase activity
D9C14_01770	COG4109	DRTGG domain
D9C14_01775	COG0730	response to heat
D9C14_01780	COG1473	amidohydrolase
D9C14_01785	COG0196	riboflavin kinase activity
D9C14_01790	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
D9C14_01795	COG0695	Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins
D9C14_01800	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
D9C14_01805	COG1126	abc transporter atp-binding protein
D9C14_01810	COG0765	amino acid transport
D9C14_01815	COG0765	amino acid transport
D9C14_01820	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
D9C14_01825	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
D9C14_01830	COG0454	-acetyltransferase
D9C14_01835	COG0583	DNA-binding transcription factor activity
D9C14_01840	COG2220	Zn-dependent hydrolases of the beta-lactamase fold
D9C14_01845	COG1028	Short-chain dehydrogenase reductase Sdr
D9C14_01855	COG0165	Argininosuccinate lyase
D9C14_01860	COG0137	argininosuccinate synthase activity
D9C14_01865	COG0521	Mo-molybdopterin cofactor biosynthetic process
D9C14_01870	COG0282	Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
D9C14_01880	COG0827	DNA restriction-modification system
D9C14_01885	COG2077	Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides
D9C14_01890	COG3874	Sporulation protein YtfJ
D9C14_01900	COG1714	RDD family
D9C14_01905	COG0616	signal peptide processing
D9C14_01910	COG0061	Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
D9C14_01915	COG1574	metal-dependent hydrolase with the TIM-barrel fold
D9C14_01920	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
D9C14_01930	COG0301	tRNA thio-modification
D9C14_01935	COG1104	cysteine desulfurase activity
D9C14_01940	COG1114	Component of the transport system for branched-chain amino acids
D9C14_01945	COG4477	modulates the frequency and position of FtsZ ring formation. Inhibits FtsZ ring formation at polar sites. Interacts either with FtsZ or with one of its binding partners to promote depolymerization
D9C14_01950	COG1387	Histidinol phosphatase and related hydrolases of the PHP family
D9C14_01955	COG1309	transcriptional regulator
D9C14_01960	COG1956	GAF domain-containing protein
D9C14_01965	COG2199	diguanylate cyclase activity
D9C14_01965	COG2203	Gaf domain
D9C14_01975	COG0522	One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit
D9C14_01980	COG0162	Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
D9C14_01985	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
D9C14_01990	COG0454	-acetyltransferase
D9C14_01995	COG0517	IMP dehydrogenase activity
D9C14_02000	COG0123	including yeast histone deacetylase and acetoin utilization protein
D9C14_02005	COG1360	Flagellar Motor Protein
D9C14_02010	COG1291	archaeal or bacterial-type flagellum-dependent cell motility
D9C14_02015	COG1609	Transcriptional regulator
D9C14_02020	COG2876	3-deoxy-7-phosphoheptulonate synthase activity
D9C14_02020	COG1605	Chorismate mutase
D9C14_02025	COG3118	belongs to the thioredoxin family
D9C14_02030	COG4980	gas vesicle protein
D9C14_02035	COG4768	protein containing a divergent version of the methyl-accepting chemotaxis-like domain
D9C14_02040	COG0773	UDP-N-acetylmuramate-L-alanine ligase activity
D9C14_02045	COG1674	ftsk spoiiie
D9C14_02050	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
D9C14_02055	COG4848	Belongs to the UPF0354 family
D9C14_02060	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
D9C14_02075	COG1363	Peptidase, m42
D9C14_02080	COG5584	Small secreted protein
D9C14_02085	COG0281	malic enzyme
D9C14_02090	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
D9C14_02095	COG0220	tRNA (guanine-N7-)-methyltransferase activity
D9C14_02105	COG0510	thiamine kinase activity
D9C14_02110	COG1523	belongs to the glycosyl hydrolase 13 family
D9C14_02115	COG1597	lipid kinase activity
D9C14_02125	COG1514	Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'- phosphomonoester
D9C14_02130	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
D9C14_02135	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
D9C14_02140	COG2252	PERMEase
D9C14_02145	COG4473	ABC transporter
D9C14_02150	COG1131	(ABC) transporter
D9C14_02155	COG1349	DNA-binding transcription factor activity
D9C14_02160	COG1187	pseudouridine synthase activity
D9C14_02165	COG2244	polysaccharide biosynthetic process
D9C14_02170	COG2081	HI0933 family
D9C14_02175	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
D9C14_02185	COG5578	integral membrane protein
D9C14_02190	COG0673	inositol 2-dehydrogenase activity
D9C14_02195	COG1653	transport
D9C14_02200	COG4225	unsaturated rhamnogalacturonyl hydrolase activity
D9C14_02205	COG4209	transmembrane transport
D9C14_02210	COG2207	Transcriptional regulator
D9C14_02215	COG1653	transport
D9C14_02220	COG0395	ABC-type sugar transport system, permease component
D9C14_02225	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
D9C14_02230	COG2124	cytochrome p450
D9C14_02235	COG0502	Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical- based mechanism
D9C14_02245	COG0156	8-amino-7-oxononanoate synthase activity
D9C14_02250	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
D9C14_02260	COG1073	alpha beta
D9C14_02285	COG1486	melibiose metabolic process
D9C14_02290	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
D9C14_02295	COG0495	leucyl-tRNA aminoacylation
D9C14_02305	COG1366	Belongs to the anti-sigma-factor antagonist family
D9C14_02305	COG2202	Pas domain
D9C14_02310	COG2814	Major facilitator Superfamily
D9C14_02315	COG2433	Pfam Transposase IS66
D9C14_02320	COG0577	efflux transmembrane transporter activity
D9C14_02325	COG1136	(ABC) transporter
D9C14_02330	COG2205	protein histidine kinase activity
D9C14_02335	COG0745	RESPONSE REGULATOR receiver
D9C14_02340	COG0577	efflux transmembrane transporter activity
D9C14_02345	COG1136	(ABC) transporter
D9C14_02360	COG1131	(ABC) transporter
D9C14_02365	COG1725	Transcriptional regulator
D9C14_02380	COG1242	4 iron, 4 sulfur cluster binding
D9C14_02385	COG2519	Catalyzes the S-adenosyl-L-methionine-dependent formation of N(1)-methyladenine at position 58 (m1A58) in tRNA
D9C14_02395	COG2267	carboxylic ester hydrolase activity
D9C14_02400	COG0663	COG0663 Carbonic anhydrases acetyltransferases, isoleucine patch superfamily
D9C14_02405	COG1113	amino acid transport
D9C14_02410	COG0367	asparagine synthase
D9C14_02415	COG0192	Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme
D9C14_02420	COG1866	Involved in the gluconeogenesis. Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP) through direct phosphoryl transfer between the nucleoside triphosphate and OAA
D9C14_02430	COG1506	peptidase
D9C14_02435	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
D9C14_02440	COG1116	anion transmembrane transporter activity
D9C14_02445	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
D9C14_02450	COG0494	nUDIX hydrolase
D9C14_02455	COG4824	toxin secretion phage lysis holin
D9C14_02460	COG0783	Belongs to the Dps family
D9C14_02475	COG1854	S-ribosylhomocysteine lyase activity
D9C14_02480	COG0759	Could be involved in insertion of integral membrane proteins into the membrane
D9C14_02485	COG0288	reversible hydration of carbon dioxide
D9C14_02490	COG0254	rRNA binding
D9C14_02495	COG1271	oxidase subunit
D9C14_02500	COG1294	oxidase, subunit
D9C14_02510	COG1108	ABC-type Mn2 Zn2 transport systems permease components
D9C14_02515	COG1108	ABC-type Mn2 Zn2 transport systems permease components
D9C14_02515	COG1321	iron dependent repressor
D9C14_02520	COG1121	(ABC) transporter
D9C14_02525	COG0803	Belongs to the bacterial solute-binding protein 9 family
D9C14_02530	COG4948	Mandelate Racemase Muconate Lactonizing
D9C14_02535	COG0318	PFAM AMP-dependent synthetase and ligase
D9C14_02540	COG0447	Converts o-succinylbenzoyl-CoA (OSB-CoA) to 1,4- dihydroxy-2-naphthoyl-CoA (DHNA-CoA)
D9C14_02545	COG0596	Alpha beta hydrolase
D9C14_02550	COG1165	Catalyzes the thiamine diphosphate-dependent decarboxylation of 2-oxoglutarate and the subsequent addition of the resulting succinic semialdehyde-thiamine pyrophosphate anion to isochorismate to yield 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylate (SEPHCHC)
D9C14_02555	COG1169	isochorismate synthase
D9C14_02565	COG1734	Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters
D9C14_02570	COG1210	Utp--glucose-1-phosphate uridylyltransferase
D9C14_02575	COG1004	Belongs to the UDP-glucose GDP-mannose dehydrogenase family
D9C14_02580	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
D9C14_02585	COG0438	transferase activity, transferring glycosyl groups
D9C14_02595	COG2334	A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response
D9C14_02600	COG0438	transferase activity, transferring glycosyl groups
D9C14_02605	COG2334	A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response
D9C14_02610	COG3476	COG3476 Tryptophan-rich sensory protein (mitochondrial benzodiazepine receptor homolog)
D9C14_02615	COG0058	SHG alpha-glucan phosphorylase activity
D9C14_02620	COG0297	glycogen (starch) synthase activity
D9C14_02625	COG0448	Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans
D9C14_02630	COG0448	Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans
D9C14_02635	COG0296	Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position
D9C14_02760	COG3859	Proton-coupled thiamine transporter YuaJ
D9C14_02765	COG1247	-acetyltransferase
D9C14_02770	COG2268	Band 7 protein
D9C14_02775	COG1585	Membrane protein implicated in regulation of membrane protease activity
D9C14_02780	COG2318	DinB family
D9C14_02790	COG1454	alcohol dehydrogenase
D9C14_02800	COG1510	regulation of RNA biosynthetic process
D9C14_02810	COG0569	domain protein
D9C14_02815	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
D9C14_02820	COG4682	membrane
D9C14_02825	COG1705	Flagellar rod assembly protein muramidase FlgJ
D9C14_02830	COG0477	Major facilitator Superfamily
D9C14_02835	COG5553	Cysteine dioxygenase type I
D9C14_02845	COG1968	undecaprenyl-diphosphatase activity
D9C14_02850	COG0628	permease
D9C14_02855	COG0673	inositol 2-dehydrogenase activity
D9C14_02860	COG4806	L-rhamnose isomerase
D9C14_02865	COG3254	rhamnose metabolic process
D9C14_02870	COG1070	Carbohydrate kinase
D9C14_02875	COG1349	DNA-binding transcription factor activity
D9C14_02880	COG3347	Dehydrogenase
D9C14_02880	COG1028	Short-chain dehydrogenase reductase Sdr
D9C14_02890	COG0840	transmembrane signaling receptor activity
D9C14_02895	COG0840	transmembrane signaling receptor activity
D9C14_02900	COG0840	transmembrane signaling receptor activity
D9C14_02905	COG0840	transmembrane signaling receptor activity
D9C14_02920	COG0432	Pfam Uncharacterised protein family UPF0047
D9C14_02930	COG0366	Alpha amylase catalytic
D9C14_02935	COG1253	flavin adenine dinucleotide binding
D9C14_02940	COG2738	Putative neutral zinc metallopeptidase
D9C14_02955	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
D9C14_02970	COG0166	Belongs to the GPI family
D9C14_02975	COG1979	alcohol dehydrogenase
D9C14_02980	COG1979	alcohol dehydrogenase
D9C14_02985	COG2155	Conserved Protein
D9C14_02990	COG1098	S1 RNA binding domain
D9C14_02995	COG0436	Aminotransferase
D9C14_03000	COG1522	sequence-specific DNA binding
D9C14_03015	COG1522	sequence-specific DNA binding
D9C14_03020	COG2267	carboxylic ester hydrolase activity
D9C14_03030	COG1168	Bifunctional PLP-dependent enzyme with beta-cystaTHIonase and maltose regulon repressor activities
D9C14_03035	COG2205	protein histidine kinase activity
D9C14_03045	COG5018	Exonuclease
D9C14_03055	COG2814	Major facilitator Superfamily
D9C14_03060	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
D9C14_03065	COG3011	Protein conserved in bacteria
D9C14_03075	COG3290	protein histidine kinase activity
D9C14_03080	COG4565	transcriptional regulatory protein
D9C14_03105	COG3493	citrate carrier protein
D9C14_03115	COG2111	Na H antiporter
D9C14_03115	COG1009	NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit
D9C14_03120	COG2111	Na H antiporter
D9C14_03125	COG1006	Multisubunit Na H antiporter MnhC subunit
D9C14_03130	COG0651	ATP synthesis coupled electron transport
D9C14_03135	COG1863	multisubunit Na H antiporter MnhE subunit
D9C14_03140	COG2212	antiporter activity
D9C14_03145	COG1320	monovalent cation:proton antiporter activity
D9C14_03150	COG2050	protein possibly involved in aromatic compounds catabolism
D9C14_03155	COG2197	response regulator
D9C14_03160	COG4585	Histidine kinase
D9C14_03170	COG0142	geranyltranstransferase activity
D9C14_03190	COG3434	signal transduction protein containing EAL and modified HD-GYP domains
D9C14_03195	COG1488	Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP
D9C14_03200	COG1335	isochorismatase
D9C14_03205	COG5506	Protein of unknown function (DUF1694)
D9C14_03220	COG0628	permease
D9C14_03235	COG1418	mRNA catabolic process
D9C14_03240	COG1028	Short-chain dehydrogenase reductase Sdr
D9C14_03250	COG1511	domain protein
D9C14_03255	COG0433	COG0433 Predicted ATPase
D9C14_03255	COG1674	ftsk spoiiie
D9C14_03260	COG4499	WXG100 protein secretion system (Wss), protein YukC
D9C14_03265	COG5417	Belongs to the EsaB family
D9C14_03270	COG4842	Belongs to the WXG100 family
D9C14_03275	COG2508	Transcriptional regulator
D9C14_03275	COG4465	DNA-binding protein that represses the expression of many genes that are induced as cells make the transition from rapid exponential growth to stationary phase. It is a GTP-binding protein that senses the intracellular GTP concentration as an indicator of nutritional limitations. At low GTP concentration it no longer binds GTP and stop to act as a transcriptional repressor
D9C14_03280	COG0686	Belongs to the AlaDH PNT family
D9C14_03285	COG5634	Uncharacterized conserved protein (DUF2278)
D9C14_03290	COG3251	PFAM MbtH domain protein
D9C14_03295	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
D9C14_03300	COG1535	isochorismatase
D9C14_03300	COG3433	isochorismatase activity
D9C14_03305	COG1021	2,3-dihydroxybenzoate-AMP ligase
D9C14_03310	COG1169	isochorismate synthase
D9C14_03315	COG1028	Short-chain dehydrogenase reductase Sdr
D9C14_03320	COG2819	hydrolase of the alpha beta superfamily
D9C14_03325	COG2041	Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. The catalytic subunit MsrP is non-stereospecific, being able to reduce both (R-) and (S-) diastereoisomers of methionine sulfoxide
D9C14_03330	COG1268	BioY protein
D9C14_03335	COG2056	Na+-H+ antiporter family
D9C14_03340	COG0260	Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides
D9C14_03345	COG1963	PFAM Acid phosphatase vanadium-dependent haloperoxidase related
D9C14_03350	COG3584	3D domain protein
D9C14_03365	COG1252	NADH dehydrogenase
D9C14_03370	COG0492	ferredoxin-NADP+ reductase activity
D9C14_03380	COG0516	GMP reductase activity
D9C14_03385	COG2808	Putative FMN-binding domain
D9C14_03390	COG0456	acetyltransferase
D9C14_03395	COG0316	Belongs to the HesB IscA family
D9C14_03400	COG0253	Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan
D9C14_03405	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
D9C14_03410	COG4844	belongs to the
D9C14_03415	COG1252	NADH dehydrogenase
D9C14_03420	COG4837	Protein of unknown function (DUF1462)
D9C14_03425	COG0694	Involved in iron-sulfur cluster biogenesis. Binds a 4Fe- 4S cluster, can transfer this cluster to apoproteins, and thereby intervenes in the maturation of Fe S proteins. Could also act as a scaffold chaperone for damaged Fe S proteins
D9C14_03430	COG0823	Involved in the tonB-independent uptake of proteins
D9C14_03430	COG4946	Tricorn protease homolog
D9C14_03430	COG1506	peptidase
D9C14_03435	COG0083	homoserine kinase activity
D9C14_03440	COG0498	Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine
D9C14_03445	COG0460	homoserine dehydrogenase
D9C14_03450	COG2334	A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response
D9C14_03455	COG1267	Lipid phosphatase which dephosphorylates phosphatidylglycerophosphate (PGP) to phosphatidylglycerol (PG)
D9C14_03460	COG0647	UMP catabolic process
D9C14_03465	COG2445	Protein of unknown function DUF86
D9C14_03470	COG4470	Protein conserved in bacteria
D9C14_03480	COG0320	Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives
D9C14_03485	COG0739	heme binding
D9C14_03495	COG3377	Domain of unknown function (DUF1805)
D9C14_03500	COG0737	Belongs to the 5'-nucleotidase family
D9C14_03505	COG0730	response to heat
D9C14_03510	COG1801	Protein of unknown function DUF72
D9C14_03520	COG0044	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides
D9C14_03525	COG2508	Transcriptional regulator
D9C14_03530	COG2233	PERMEase
D9C14_03535	COG2233	PERMEase
D9C14_03540	COG3195	allantoin biosynthetic process
D9C14_03540	COG3648	Uricase
D9C14_03545	COG2351	hydroxyisourate hydrolase activity
D9C14_03555	COG2080	2 iron, 2 sulfur cluster binding
D9C14_03560	COG1529	Aldehyde oxidase and xanthine dehydrogenase
D9C14_03565	COG1319	Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM
D9C14_03570	COG2068	MobA-Related Protein
D9C14_03575	COG1975	Xanthine and CO dehydrogenases maturation factor, XdhC CoxF family
D9C14_03580	COG0075	2-aminoethylphosphonate-pyruvate transaminase activity
D9C14_03585	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
D9C14_03595	COG2356	endonuclease I
D9C14_03600	COG3842	ATPase activity
D9C14_03605	COG2188	Transcriptional regulator
D9C14_03610	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
D9C14_03615	COG0395	ABC-type sugar transport system, permease component
D9C14_03620	COG1175	transmembrane transport
D9C14_03625	COG1653	transport
D9C14_03630	COG2222	sugar isomerase
D9C14_03635	COG0322	excinuclease ABC activity
D9C14_03640	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
D9C14_03655	COG0346	lactoylglutathione lyase activity
D9C14_03660	COG0640	Transcriptional regulator
D9C14_03665	COG0719	Fe-S assembly protein
D9C14_03670	COG0822	iron-sulfur transferase activity
D9C14_03675	COG0520	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
D9C14_03680	COG0719	Fe-S assembly protein
D9C14_03685	COG0396	ATPase activity
D9C14_03700	COG0599	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
D9C14_03705	COG1464	Belongs to the NlpA lipoprotein family
D9C14_03710	COG2011	ABC-type metal ion transport system permease component
D9C14_03715	COG1135	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
D9C14_03725	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
D9C14_03730	COG1658	Required for correct processing of both the 5' and 3' ends of 5S rRNA precursor. Cleaves both sides of a double-stranded region yielding mature 5S rRNA in one step
D9C14_03740	COG0509	glycine decarboxylation via glycine cleavage system
D9C14_03745	COG1393	Belongs to the ArsC family
D9C14_03750	COG1960	acyl-CoA dehydrogenase activity
D9C14_03755	COG0183	Belongs to the thiolase family
D9C14_03760	COG1024	Enoyl-CoA hydratase
D9C14_03760	COG1250	3-hydroxyacyl-CoA dehydrogenase
D9C14_03770	COG0506	proline dehydrogenase activity
D9C14_03780	COG5577	PFAM Coat F domain
D9C14_03785	COG1846	Transcriptional regulator
D9C14_03790	COG0477	Major facilitator Superfamily
D9C14_03795	COG1942	4-Oxalocrotonate Tautomerase
D9C14_03800	COG1028	Short-chain dehydrogenase reductase Sdr
D9C14_03805	COG0583	DNA-binding transcription factor activity
D9C14_03815	COG1120	ATPase activity
D9C14_03830	COG1028	Short-chain dehydrogenase reductase Sdr
D9C14_03835	COG0783	Belongs to the Dps family
D9C14_03840	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
D9C14_03845	COG0745	RESPONSE REGULATOR receiver
D9C14_03850	COG2770	Histidine kinase
D9C14_03850	COG2205	protein histidine kinase activity
D9C14_03860	COG1309	transcriptional regulator
D9C14_03865	COG0114	fumarate hydratase activity
D9C14_03875	COG0697	spore germination
D9C14_03880	COG0814	amino acid
D9C14_03890	COG2197	response regulator
D9C14_03895	COG4585	Histidine kinase
D9C14_03900	COG4758	membrane
D9C14_03905	COG3595	metallopeptidase activity
D9C14_03910	COG1842	Phage shock protein A
D9C14_03915	COG4758	membrane
D9C14_03920	COG2814	Major facilitator Superfamily
D9C14_03925	COG2096	Adenosyltransferase
D9C14_03930	COG1120	ATPase activity
D9C14_03935	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
D9C14_03940	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
D9C14_03945	COG1028	Short-chain dehydrogenase reductase Sdr
D9C14_03950	COG3386	PFAM SMP-30 Gluconolaconase
D9C14_03955	COG2205	protein histidine kinase activity
D9C14_03960	COG0745	RESPONSE REGULATOR receiver
D9C14_03970	COG1191	sigma factor activity
D9C14_03980	COG2140	Oxalate decarboxylase
D9C14_03990	COG0577	efflux transmembrane transporter activity
D9C14_03995	COG1136	(ABC) transporter
D9C14_04000	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
D9C14_04005	COG1120	ATPase activity
D9C14_04010	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
D9C14_04015	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
D9C14_04020	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
D9C14_04030	COG0531	amino acid
D9C14_04045	COG1988	membrane-bound metal-dependent
D9C14_04050	COG1368	sulfuric ester hydrolase activity
D9C14_04055	COG1910	domain protein
D9C14_04060	COG0725	ABC transporter, periplasmic molybdate-binding protein
D9C14_04065	COG4149	molybdate abc transporter
D9C14_04070	COG0656	L-ascorbic acid biosynthetic process
D9C14_04080	COG0025	NhaP-type Na H and K H
D9C14_04085	COG0155	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
D9C14_04090	COG0369	Component of the sulfite reductase complex that catalyzes the 6-electron reduction of sulfite to sulfide. This is one of several activities required for the biosynthesis of L- cysteine from sulfate. The flavoprotein component catalyzes the electron flow from NADPH - FAD - FMN to the hemoprotein component
D9C14_04095	COG3973	AAA domain
D9C14_04105	COG2860	membrane
D9C14_04110	COG1495	Required for disulfide bond formation in some periplasmic proteins. Acts by oxidizing the DsbA protein
D9C14_04115	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
D9C14_04120	COG2217	Heavy metal translocating P-type atpase
D9C14_04125	COG2217	Heavy metal translocating P-type atpase
D9C14_04130	COG2608	mercury ion transmembrane transporter activity
D9C14_04135	COG1937	Protein conserved in bacteria
D9C14_04140	COG0673	inositol 2-dehydrogenase activity
D9C14_04145	COG1182	Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity
D9C14_04150	COG1289	transmembrane transporter activity
D9C14_04160	COG2076	Multidrug Resistance protein
D9C14_04165	COG1309	transcriptional regulator
D9C14_04170	COG1028	Short-chain dehydrogenase reductase Sdr
D9C14_04180	COG0691	Required for rescue of stalled ribosomes mediated by trans-translation. Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes. tmRNA and SmpB together mimic tRNA shape, replacing the anticodon stem-loop with SmpB. tmRNA is encoded by the ssrA gene
D9C14_04185	COG0557	exoribonuclease II activity
D9C14_04190	COG1647	Serine aminopeptidase, S33
D9C14_04195	COG1314	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
D9C14_04200	COG0596	Alpha beta hydrolase
D9C14_04205	COG1476	TRANSCRIPTIONal
D9C14_04210	COG1396	sequence-specific DNA binding
D9C14_04215	COG1396	sequence-specific DNA binding
D9C14_04220	COG1733	regulation of RNA biosynthetic process
D9C14_04225	COG0840	transmembrane signaling receptor activity
D9C14_04230	COG1174	glycine betaine transport
D9C14_04235	COG1732	Glycine betaine
D9C14_04240	COG1174	glycine betaine transport
D9C14_04245	COG1125	glycine betaine transport
D9C14_04245	COG0517	IMP dehydrogenase activity
D9C14_04250	COG1510	regulation of RNA biosynthetic process
D9C14_04255	COG1174	glycine betaine transport
D9C14_04260	COG1732	Glycine betaine
D9C14_04265	COG1174	glycine betaine transport
D9C14_04270	COG0517	IMP dehydrogenase activity
D9C14_04270	COG1125	glycine betaine transport
D9C14_04275	COG1510	regulation of RNA biosynthetic process
D9C14_04280	COG2095	MarC family integral membrane protein
D9C14_04290	COG3064	Membrane
D9C14_04295	COG4640	response to antibiotic
D9C14_04300	COG0456	acetyltransferase
D9C14_04305	COG0148	phosphopyruvate hydratase activity
D9C14_04310	COG0696	Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
D9C14_04315	COG0149	triose-phosphate isomerase activity
D9C14_04320	COG0126	phosphoglycerate kinase activity
D9C14_04325	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
D9C14_04330	COG2390	Transcriptional regulator
D9C14_04335	COG2814	Major facilitator Superfamily
D9C14_04340	COG1609	Transcriptional regulator
D9C14_04345	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
D9C14_04355	COG0583	DNA-binding transcription factor activity
D9C14_04360	COG0697	spore germination
D9C14_04365	COG1113	amino acid transport
D9C14_04370	COG3858	chitin binding
D9C14_04375	COG1556	Lactate utilization protein
D9C14_04380	COG1139	Iron-sulfur cluster binding protein
D9C14_04385	COG0247	lactate metabolic process
D9C14_04390	COG2197	response regulator
D9C14_04395	COG4585	Histidine kinase
D9C14_04400	COG0842	Transport permease protein
D9C14_04405	COG1131	(ABC) transporter
D9C14_04410	COG0596	Alpha beta hydrolase
D9C14_04415	COG2208	phosphoserine phosphatase activity
D9C14_04420	COG3867	Arabinogalactan endo-beta-1,4-galactanase
D9C14_04425	COG1874	Beta-galactosidase
D9C14_04430	COG3833	ABC-type maltose transport systems, permease component
D9C14_04435	COG1175	transmembrane transport
D9C14_04440	COG2182	Extracellular solute-binding protein
D9C14_04445	COG1609	Transcriptional regulator
D9C14_04450	COG2186	Transcriptional regulator
D9C14_04455	COG1620	l-lactate permease
D9C14_04460	COG1508	bacterial-type RNA polymerase transcriptional activator activity, sequence-specific DNA binding
D9C14_04470	COG5039	Polysaccharide pyruvyl transferase
D9C14_04475	COG0399	UDP-4-amino-4-deoxy-L-arabinose aminotransferase
D9C14_04480	COG0110	maltose O-acetyltransferase activity
D9C14_04485	COG2148	undecaprenyl-phosphate glucose phosphotransferase activity
D9C14_04490	COG2244	polysaccharide biosynthetic process
D9C14_04495	COG1216	Glycosyl transferase, family 2
D9C14_04500	COG5039	Polysaccharide pyruvyl transferase
D9C14_04505	COG1216	Glycosyl transferase, family 2
D9C14_04515	COG0438	transferase activity, transferring glycosyl groups
D9C14_04520	COG1215	transferase activity, transferring glycosyl groups
D9C14_04525	COG0438	transferase activity, transferring glycosyl groups
D9C14_04530	COG1086	Polysaccharide biosynthesis protein
D9C14_04535	COG0489	protein tyrosine kinase activity
D9C14_04540	COG3944	biosynthesis protein
D9C14_04545	COG1396	sequence-specific DNA binding
D9C14_04550	COG2272	Belongs to the type-B carboxylesterase lipase family
D9C14_04560	COG3479	Phenolic acid decarboxylase
D9C14_04570	COG1794	racemase activity, acting on amino acids and derivatives
D9C14_04575	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
D9C14_04580	COG1621	beta-fructofuranosidase activity
D9C14_04585	COG1621	beta-fructofuranosidase activity
D9C14_04590	COG0531	amino acid
D9C14_04595	COG1309	transcriptional regulator
D9C14_04600	COG2076	Multidrug Resistance protein
D9C14_04605	COG2076	Multidrug Resistance protein
D9C14_04615	COG0277	FAD linked oxidase domain protein
D9C14_04620	COG3621	Patatin-like phospholipase
D9C14_04630	COG0740	serine-type endopeptidase activity
D9C14_04635	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
D9C14_04640	COG0366	Alpha amylase catalytic
D9C14_04645	COG1554	hydrolase, family 65, central catalytic
D9C14_04650	COG5521	maltodextrose utilization protein MalA
D9C14_04655	COG3833	ABC-type maltose transport systems, permease component
D9C14_04660	COG1175	transmembrane transport
D9C14_04665	COG2182	Extracellular solute-binding protein
D9C14_04670	COG0366	Alpha amylase catalytic
D9C14_04675	COG1609	Transcriptional regulator
D9C14_04680	COG1611	Belongs to the LOG family
D9C14_04685	COG1694	Mazg nucleotide pyrophosphohydrolase
D9C14_04690	COG0659	secondary active sulfate transmembrane transporter activity
D9C14_04695	COG0288	reversible hydration of carbon dioxide
D9C14_04705	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
D9C14_04710	COG0577	efflux transmembrane transporter activity
D9C14_04715	COG1136	(ABC) transporter
D9C14_04720	COG5002	protein histidine kinase activity
D9C14_04725	COG0745	RESPONSE REGULATOR receiver
D9C14_04735	COG2162	N-hydroxyarylamine O-acetyltransferase activity
D9C14_04740	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
D9C14_04745	COG1481	regulation of sporulation
D9C14_04750	COG0391	Required for morphogenesis under gluconeogenic growth conditions
D9C14_04755	COG1660	Displays ATPase and GTPase activities
D9C14_04760	COG1051	belongs to the nudix hydrolase family
D9C14_04765	COG0492	ferredoxin-NADP+ reductase activity
D9C14_04770	COG0791	NLP P60 protein
D9C14_04770	COG3883	PFAM NLP P60 protein
D9C14_04775	COG0457	Tetratricopeptide repeat
D9C14_04780	COG1132	(ABC) transporter
D9C14_04800	COG0139	Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP
D9C14_04800	COG0140	phosphoribosyl-ATP diphosphatase activity
D9C14_04805	COG0107	imidazoleglycerol-phosphate synthase activity
D9C14_04810	COG0106	1-(5-phosphoribosyl)-5- 5-phosphoribosylamino)methylideneamino imidazole-4-carboxamide isomerase
D9C14_04815	COG0118	IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR
D9C14_04820	COG0131	Imidazoleglycerol-phosphate dehydratase
D9C14_04825	COG0141	Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine
D9C14_04830	COG0040	Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of hisG enzymatic activity
D9C14_04835	COG3705	Required for the first step of histidine biosynthesis. May allow the feedback regulation of ATP phosphoribosyltransferase activity by histidine
D9C14_04840	COG4990	cell redox homeostasis
D9C14_04845	COG5297	Belongs to the glycosyl hydrolase family 6
D9C14_04850	COG0110	maltose O-acetyltransferase activity
D9C14_04855	COG0546	phosphoglycolate phosphatase activity
D9C14_04860	COG0370	Transporter of a GTP-driven Fe(2 ) uptake system
D9C14_04865	COG0682	Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins
D9C14_04870	COG1493	Catalyzes the ATP- as well as the pyrophosphate- dependent phosphorylation of a specific serine residue in HPr, a phosphocarrier protein of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS). HprK P also catalyzes the pyrophosphate-producing, inorganic phosphate-dependent dephosphorylation (phosphorolysis) of seryl-phosphorylated HPr (P- Ser-HPr). The two antagonistic activities of HprK P are regulated by several intracellular metabolites, which change their concentration in response to the absence or presence of rapidly metabolisable carbon sources (glucose, fructose, etc.) in the growth medium. Therefore, by controlling the phosphorylation state of HPr, HPrK P is a sensor enzyme that plays a major role in the regulation of carbon metabolism and sugar transport it mediates carbon catabolite repression (CCR), and regulates PTS-catalyzed carbohydrate uptake and inducer exclusion
D9C14_04875	COG1820	Belongs to the metallo-dependent hydrolases superfamily. NagA family
D9C14_04880	COG0363	glucosamine-6-phosphate deaminase activity
D9C14_04890	COG1409	Hydrolyzes cAMP to 5'-AMP. Plays an important regulatory role in modulating the intracellular concentration of cAMP, thereby influencing cAMP-dependent processes
D9C14_04895	COG1846	Transcriptional regulator
D9C14_04910	COG1846	Transcriptional regulator
D9C14_04915	COG2814	Major facilitator Superfamily
D9C14_04920	COG1950	PFAM Membrane protein of
D9C14_04925	COG1983	PspC domain protein
D9C14_04930	COG3595	metallopeptidase activity
D9C14_04945	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
D9C14_04950	COG0178	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate
D9C14_04955	COG0556	nucleotide-excision repair
D9C14_04960	COG4897	Protein conserved in bacteria
D9C14_04965	COG3848	Pyruvate phosphate dikinase
D9C14_04965	COG0574	Belongs to the PEP-utilizing enzyme family
D9C14_04970	COG1309	transcriptional regulator
D9C14_04975	COG2814	Major facilitator Superfamily
D9C14_04980	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
D9C14_04990	COG0793	Belongs to the peptidase S41A family
D9C14_04990	COG3409	Peptidoglycan-binding domain 1 protein
D9C14_04995	COG2177	Part of the ABC transporter FtsEX involved in
D9C14_05000	COG2884	Cell division ATP-binding protein ftsE
D9C14_05005	COG2010	Cytochrome c
D9C14_05010	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
D9C14_05020	COG0653	protein targeting
D9C14_05025	COG1544	Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
D9C14_05040	COG1516	flagellar protein fliS
D9C14_05045	COG1345	Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end
D9C14_05050	COG1334	flagellar protein FlaG
D9C14_05055	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
D9C14_05060	COG1551	Could accelerate the degradation of some genes transcripts potentially through selective RNA binding
D9C14_05065	COG1699	Binds to the C-terminal region of flagellin, which is implicated in polymerization, and participates in the assembly of the flagellum
D9C14_05075	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
D9C14_05080	COG1256	bacterial-type flagellum assembly
D9C14_05080	COG4786	Flagellar basal body rod
D9C14_05085	COG3418	PFAM FlgN family protein
D9C14_05090	COG2747	anti-sigma28 factor FlgM
D9C14_05100	COG1040	competence protein
D9C14_05110	COG4098	Superfamily II DNA RNA helicase required for DNA uptake (late competence protein)
D9C14_05115	COG1307	EDD domain protein, DegV family
D9C14_05120	COG2197	response regulator
D9C14_05125	COG4585	Histidine kinase
D9C14_05130	COG1739	Uncharacterized protein family UPF0029
D9C14_05135	COG1316	TRANSCRIPTIONal
D9C14_05140	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
D9C14_05145	COG0438	transferase activity, transferring glycosyl groups
D9C14_05150	COG1215	transferase activity, transferring glycosyl groups
D9C14_05155	COG3206	protein involved in exopolysaccharide biosynthesis
D9C14_05160	COG3307	-O-antigen
D9C14_05165	COG1004	Belongs to the UDP-glucose GDP-mannose dehydrogenase family
D9C14_05170	COG0297	glycogen (starch) synthase activity
D9C14_05170	COG0438	transferase activity, transferring glycosyl groups
D9C14_05175	COG2244	polysaccharide biosynthetic process
D9C14_05190	COG2247	cell wall binding repeat
D9C14_05190	COG0860	N-Acetylmuramoyl-L-alanine amidase
D9C14_05195	COG2385	sporulation resulting in formation of a cellular spore
D9C14_05195	COG2247	cell wall binding repeat
D9C14_05205	COG1316	TRANSCRIPTIONal
D9C14_05210	COG0381	UDP-N-acetylglucosamine 2-epimerase activity
D9C14_05230	COG1210	Utp--glucose-1-phosphate uridylyltransferase
D9C14_05235	COG1134	teichoic acid transport
D9C14_05240	COG1682	transport, permease protein
D9C14_05255	COG1887	Glycosyl glycerophosphate transferases involved in teichoic acid biosynthesis TagF TagB EpsJ RodC
D9C14_05255	COG1215	transferase activity, transferring glycosyl groups
D9C14_05260	COG0463	Glycosyl transferase, family 2
D9C14_05305	COG4193	domain, Protein
D9C14_05310	COG1482	cell wall glycoprotein biosynthetic process
D9C14_05315	COG0697	spore germination
D9C14_05320	COG0814	amino acid
D9C14_05330	COG2814	Major facilitator Superfamily
D9C14_05335	COG1316	TRANSCRIPTIONal
D9C14_05340	COG0561	phosphatase activity
D9C14_05345	COG0791	NLP P60 protein
D9C14_05355	COG2843	Capsule synthesis protein
D9C14_05365	COG0771	Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA)
D9C14_05370	COG1609	Transcriptional regulator
D9C14_05375	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
D9C14_05380	COG1869	D-ribose catabolic process
D9C14_05385	COG1129	ABC transporter
D9C14_05390	COG1172	Belongs to the binding-protein-dependent transport system permease family
D9C14_05395	COG1879	ABC-type sugar transport system periplasmic component
D9C14_05400	COG3103	Sh3 type 3 domain protein
D9C14_05410	COG2249	NAD(P)H dehydrogenase (quinone) activity
D9C14_05415	COG3527	Alpha-acetolactate decarboxylase
D9C14_05420	COG0028	Belongs to the TPP enzyme family
D9C14_05425	COG0583	DNA-binding transcription factor activity
D9C14_05430	COG1055	Involved in arsenical resistance. Thought to form the channel of an arsenite pump
D9C14_05445	COG5337	Spore coat protein CotH
D9C14_05455	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
D9C14_05465	COG0405	Gamma-glutamyltransferase
D9C14_05470	COG1522	sequence-specific DNA binding
D9C14_05475	COG2059	Chromate
D9C14_05480	COG2059	Chromate
D9C14_05490	COG0655	NAD(P)H dehydrogenase (quinone) activity
D9C14_05495	COG0583	DNA-binding transcription factor activity
D9C14_05525	COG5444	nuclease activity
D9C14_05545	COG3878	Protein conserved in bacteria
D9C14_05550	COG1004	Belongs to the UDP-glucose GDP-mannose dehydrogenase family
D9C14_05555	COG4464	protein tyrosine phosphatase activity
D9C14_05560	COG0489	protein tyrosine kinase activity
D9C14_05565	COG3944	biosynthesis protein
D9C14_05575	COG4715	Zinc finger, swim domain protein
D9C14_05580	COG0553	Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair
D9C14_05585	COG0561	phosphatase activity
D9C14_05590	COG1349	DNA-binding transcription factor activity
D9C14_05595	COG0629	single-stranded DNA binding
D9C14_05610	COG3764	Sortase (surface protein transpeptidase)
D9C14_05615	COG0745	RESPONSE REGULATOR receiver
D9C14_05615	COG2972	Histidine kinase
D9C14_05620	COG1970	mechanosensitive ion channel activity
D9C14_05625	COG0764	3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity
D9C14_05630	COG0457	Tetratricopeptide repeat
D9C14_05635	COG4786	Flagellar basal body rod
D9C14_05640	COG4786	Flagellar basal body rod
D9C14_05645	COG1077	Cell shape determining protein MreB Mrl
D9C14_05650	COG1609	Transcriptional regulator
D9C14_05660	COG1846	Transcriptional regulator
D9C14_05665	COG2814	Major facilitator Superfamily
D9C14_05670	COG3420	alginic acid biosynthetic process
D9C14_05675	COG1953	Uracil, thiamine, allantoin
D9C14_05680	COG0477	Major facilitator Superfamily
D9C14_05685	COG1335	isochorismatase
D9C14_05695	COG0004	ammonium transporteR
D9C14_05700	COG0347	Belongs to the P(II) protein family
D9C14_05705	COG0671	phosphoesterase, PA-phosphatase related
D9C14_05715	COG0739	heme binding
D9C14_05720	COG1247	-acetyltransferase
D9C14_05740	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
D9C14_05745	COG0789	Transcriptional regulator
D9C14_05755	COG2910	NAD(P)H-binding
D9C14_05760	COG1959	2 iron, 2 sulfur cluster binding
D9C14_05765	COG0804	urea catabolic process
D9C14_05770	COG0832	Belongs to the urease beta subunit family
D9C14_05775	COG0831	urea catabolic process
D9C14_05790	COG3237	CsbD-like
D9C14_05795	COG1994	Peptidase M50
D9C14_05800	COG0457	Tetratricopeptide repeat
D9C14_05810	COG2896	Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate
D9C14_05815	COG1526	Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH
D9C14_05825	COG2304	oxidoreductase activity
D9C14_05835	COG2304	oxidoreductase activity
D9C14_05840	COG2385	sporulation resulting in formation of a cellular spore
D9C14_05845	COG0766	Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
D9C14_05855	COG4836	Membrane
D9C14_05865	COG0355	proton-transporting ATP synthase activity, rotational mechanism
D9C14_05870	COG0055	Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits
D9C14_05875	COG0224	Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex
D9C14_05880	COG0056	Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit
D9C14_05885	COG0712	F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
D9C14_05890	COG0711	Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)
D9C14_05895	COG0636	F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
D9C14_05900	COG0356	it plays a direct role in the translocation of protons across the membrane
D9C14_05910	COG0035	Catalyzes the conversion of uracil and 5-phospho-alpha- D-ribose 1-diphosphate (PRPP) to UMP and diphosphate
D9C14_05915	COG0112	Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism
D9C14_05920	COG4475	Protein of unknown function (DUF436)
D9C14_05925	COG0698	ribose 5-phosphate isomerase
D9C14_05930	COG0394	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
D9C14_05935	COG1971	Probably functions as a manganese efflux pump
D9C14_05940	COG0009	L-threonylcarbamoyladenylate synthase
D9C14_05945	COG1246	Belongs to the acetyltransferase family. ArgA subfamily
D9C14_05965	COG2890	protein-(glutamine-N5) methyltransferase activity
D9C14_05970	COG0216	Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA
D9C14_05975	COG0346	lactoylglutathione lyase activity
D9C14_05980	COG0789	Transcriptional regulator
D9C14_05985	COG0679	Auxin Efflux Carrier
D9C14_05990	COG0281	malic enzyme
D9C14_05995	COG1435	thymidine kinase activity
D9C14_06000	COG0254	rRNA binding
D9C14_06005	COG1158	Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template
D9C14_06015	COG1494	fructose-1,6-bisphosphatase
D9C14_06020	COG0766	Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
D9C14_06025	COG0176	Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
D9C14_06030	COG0191	fructose-bisphosphate aldolase activity
D9C14_06035	COG2204	response regulator
D9C14_06040	COG4821	SIS domain
D9C14_06045	COG0504	CTP synthase activity
D9C14_06050	COG3343	RNA polymerase activity
D9C14_06055	COG1960	acyl-CoA dehydrogenase activity
D9C14_06060	COG0247	lactate metabolic process
D9C14_06060	COG2181	nitrate reductase activity
D9C14_06065	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
D9C14_06070	COG4294	response to UV
D9C14_06080	COG0262	Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis
D9C14_06085	COG1132	(ABC) transporter
D9C14_06090	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
D9C14_06100	COG2181	nitrate reductase activity
D9C14_06105	COG2180	nitrate reductase molybdenum cofactor assembly chaperone
D9C14_06110	COG1140	nitrate reductase beta subunit
D9C14_06115	COG5013	Belongs to the prokaryotic molybdopterin-containing oxidoreductase family
D9C14_06120	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
D9C14_06130	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
D9C14_06135	COG2223	nitrite transmembrane transporter activity
D9C14_06140	COG0018	arginyl-trna synthetase
D9C14_06145	COG4506	Protein conserved in bacteria
D9C14_06160	COG0535	radical SAM domain protein
D9C14_06170	COG1131	(ABC) transporter
D9C14_06175	COG0474	ATPase, P-type transporting, HAD superfamily, subfamily IC
D9C14_06180	COG0612	Peptidase, M16
D9C14_06185	COG0612	Peptidase, M16
D9C14_06195	COG3391	amine dehydrogenase activity
D9C14_06200	COG3391	amine dehydrogenase activity
D9C14_06210	COG0457	Tetratricopeptide repeat
D9C14_06240	COG1131	(ABC) transporter
D9C14_06250	COG0010	Belongs to the arginase family
D9C14_06255	COG0421	Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine
D9C14_06260	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
D9C14_06275	COG1994	Peptidase M50
D9C14_06280	COG1942	4-Oxalocrotonate Tautomerase
D9C14_06285	COG1846	Transcriptional regulator
D9C14_06290	COG0441	Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
D9C14_06300	COG0477	Major facilitator Superfamily
D9C14_06305	COG1959	2 iron, 2 sulfur cluster binding
D9C14_06310	COG3465	dGTPase activity
D9C14_06315	COG1078	dGTPase activity
D9C14_06320	COG4844	belongs to the
D9C14_06330	COG0697	spore germination
D9C14_06335	COG0095	Lipoate-protein ligase
D9C14_06340	COG0583	DNA-binding transcription factor activity
D9C14_06345	COG0280	phosphate acetyltransferase
D9C14_06355	COG1028	Short-chain dehydrogenase reductase Sdr
D9C14_06360	COG0436	Aminotransferase
D9C14_06365	COG2814	Major facilitator Superfamily
D9C14_06370	COG0151	Belongs to the GarS family
D9C14_06375	COG1028	Short-chain dehydrogenase reductase Sdr
D9C14_06380	COG1917	Cupin 2, conserved barrel domain protein
D9C14_06385	COG0077	Prephenate dehydratase
D9C14_06390	COG2814	Major facilitator Superfamily
D9C14_06395	COG0833	amino acid
D9C14_06400	COG4187	Peptidase family M20/M25/M40
D9C14_06405	COG1012	belongs to the aldehyde dehydrogenase family
D9C14_06410	COG0334	Belongs to the Glu Leu Phe Val dehydrogenases family
D9C14_06420	COG1898	dTDP-4-dehydrorhamnose 3,5-epimerase activity
D9C14_06425	COG1091	dTDP-4-dehydrorhamnose reductase activity
D9C14_06430	COG1088	dTDP-glucose 4,6-dehydratase activity
D9C14_06435	COG1209	Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis
D9C14_06440	COG3980	spore coat polysaccharide biosynthesis protein
D9C14_06445	COG1861	Spore coat polysaccharide biosynthesis protein F CMP-KDO synthetase
D9C14_06450	COG2089	acid synthase
D9C14_06455	COG0456	acetyltransferase
D9C14_06460	COG0399	UDP-4-amino-4-deoxy-L-arabinose aminotransferase
D9C14_06465	COG1887	Glycosyl glycerophosphate transferases involved in teichoic acid biosynthesis TagF TagB EpsJ RodC
D9C14_06470	COG0463	Glycosyl transferase, family 2
D9C14_06485	COG2363	Small membrane protein
D9C14_06490	COG2233	PERMEase
D9C14_06500	COG1012	belongs to the aldehyde dehydrogenase family
D9C14_06505	COG0692	Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine
D9C14_06510	COG1216	Glycosyl transferase, family 2
D9C14_06515	COG0351	phosphomethylpyrimidine kinase
D9C14_06525	COG1621	beta-fructofuranosidase activity
D9C14_06530	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
D9C14_06530	COG1263	PTS System
D9C14_06535	COG2116	formate transmembrane transporter activity
D9C14_06540	COG3711	transcriptional antiterminator
D9C14_06550	COG1404	Belongs to the peptidase S8 family
D9C14_06555	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
D9C14_06560	COG0778	Nitroreductase
D9C14_06565	COG0772	Belongs to the SEDS family
D9C14_06575	COG3125	oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor
D9C14_06580	COG1845	cytochrome c oxidase, subunit III
D9C14_06585	COG0843	Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B
D9C14_06590	COG1622	oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor
D9C14_06595	COG2261	transglycosylase associated protein
D9C14_06600	COG4468	UDPglucose--hexose-1-phosphate uridylyltransferase
D9C14_06605	COG0153	Catalyzes the transfer of the gamma-phosphate of ATP to D-galactose to form alpha-D-galactose-1-phosphate (Gal-1-P)
D9C14_06610	COG2246	polysaccharide biosynthetic process
D9C14_06615	COG1309	transcriptional regulator
D9C14_06625	COG3162	membrane
D9C14_06630	COG4147	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
D9C14_06635	COG2761	dithiol-disulfide isomerase involved in polyketide biosynthesis
D9C14_06640	COG2837	iron assimilation
D9C14_06645	COG2822	iron ion transport
D9C14_06650	COG0672	)-iron permease
D9C14_06655	COG0352	thiamine-phosphate diphosphorylase activity
D9C14_06660	COG2145	Catalyzes the phosphorylation of the hydroxyl group of 4-methyl-5-beta-hydroxyethylthiazole (THZ)
D9C14_06665	COG0583	DNA-binding transcription factor activity
D9C14_06670	COG1380	Effector of murein hydrolase LrgA
D9C14_06675	COG1346	cytolysis
D9C14_06680	COG2814	Major facilitator Superfamily
D9C14_06685	COG4895	conserved protein (DUF2196)
D9C14_06690	COG1092	Specifically methylates the guanine in position 2445 (m2G2445) and the guanine in position 2069 (m7G2069) of 23S rRNA
D9C14_06695	COG0346	lactoylglutathione lyase activity
D9C14_06700	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
D9C14_06705	COG1404	Belongs to the peptidase S8 family
D9C14_06710	COG1263	PTS System
D9C14_06710	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
D9C14_06715	COG3711	transcriptional antiterminator
D9C14_06720	COG1442	glycosyl transferase family 8
D9C14_06725	COG5522	Integral membrane protein (intg_mem_TP0381)
D9C14_06730	COG1846	Transcriptional regulator
D9C14_06735	COG0162	Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
D9C14_06740	COG2234	aminopeptidase activity
D9C14_06755	COG2814	Major facilitator Superfamily
D9C14_06760	COG2357	RelA SpoT domain protein
D9C14_06765	COG1575	Belongs to the MenA family. Type 1 subfamily
D9C14_06785	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
D9C14_06790	COG1696	Membrane protein involved in D-alanine export
D9C14_06795	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
D9C14_06800	COG3966	Protein involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein)
D9C14_06805	COG3967	Belongs to the short-chain dehydrogenases reductases (SDR) family
D9C14_06810	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
D9C14_06815	COG1486	melibiose metabolic process
D9C14_06820	COG1447	Phosphotransferase system cellobiose-specific component IIA
D9C14_06825	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
D9C14_06830	COG1440	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
D9C14_06835	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
D9C14_06835	COG3711	transcriptional antiterminator
D9C14_06845	COG2094	Belongs to the DNA glycosylase MPG family
D9C14_06850	COG0753	catalase activity
D9C14_06860	COG1277	ABC-type transport system involved in multi-copper enzyme maturation permease component
D9C14_06865	COG1131	(ABC) transporter
D9C14_06885	COG1595	DNA-templated transcription, initiation
D9C14_06890	COG1457	Belongs to the purine-cytosine permease (2.A.39) family
D9C14_06895	COG0063	ADP-dependent NAD(P)H-hydrate dehydratase activity
D9C14_06900	COG4987	ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease ATP-binding protein CydC
D9C14_06905	COG4988	ABC transporter
D9C14_06910	COG1294	oxidase, subunit
D9C14_06915	COG1271	oxidase subunit
D9C14_06920	COG3493	citrate carrier protein
D9C14_06925	COG0501	Belongs to the peptidase M48B family
D9C14_06935	COG0726	polysaccharide deacetylase
D9C14_06940	COG3842	ATPase activity
D9C14_06945	COG2508	Transcriptional regulator
D9C14_06950	COG1012	belongs to the aldehyde dehydrogenase family
D9C14_06955	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
D9C14_06970	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
D9C14_06975	COG1881	PFAM PEBP family protein
D9C14_06980	COG0583	DNA-binding transcription factor activity
D9C14_06990	COG4585	Histidine kinase
D9C14_06995	COG2197	response regulator
D9C14_07000	COG2195	Cleaves the N-terminal amino acid of tripeptides
D9C14_07010	COG4894	glucomannan catabolic process
D9C14_07015	COG0620	Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation
D9C14_07020	COG0620	Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation
D9C14_07025	COG1028	Short-chain dehydrogenase reductase Sdr
D9C14_07030	COG2057	Acyl CoA acetate 3-ketoacid CoA transferase beta subunit
D9C14_07035	COG1788	Acyl CoA acetate 3-ketoacid CoA transferase, alpha subunit
D9C14_07040	COG2610	gluconate transmembrane transporter activity
D9C14_07045	COG0500	methyltransferase
D9C14_07050	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
D9C14_07065	COG0753	catalase activity
D9C14_07065	COG0693	protein deglycase activity
D9C14_07070	COG2851	Citrate transporter
D9C14_07075	COG2273	Hydrolase Family 16
D9C14_07080	COG3711	transcriptional antiterminator
D9C14_07090	COG2270	Major facilitator Superfamily
D9C14_07095	COG0513	Belongs to the DEAD box helicase family
D9C14_07100	COG2755	lipolytic protein G-D-S-L family
D9C14_07100	COG3401	FG-GAP repeat protein
D9C14_07150	COG3209	COG3209 Rhs family protein
D9C14_07155	COG0697	spore germination
D9C14_07165	COG0789	Transcriptional regulator
D9C14_07185	COG0589	response to stress
D9C14_07190	COG2723	6-phospho-beta-galactosidase activity
D9C14_07195	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
D9C14_07195	COG2190	(PTS) system
D9C14_07195	COG1263	PTS System
D9C14_07245	COG3507	Belongs to the glycosyl hydrolase 43 family
D9C14_07260	COG2986	histidine ammonia-lyase
D9C14_07265	COG2987	Catalyzes the conversion of urocanate to 4-imidazolone- 5-propionate
D9C14_07270	COG1228	amidohydrolase
D9C14_07275	COG0010	Belongs to the arginase family
D9C14_07280	COG0833	amino acid
D9C14_07285	COG0213	The enzymes which catalyze the reversible phosphorolysis of pyrimidine nucleosides are involved in the degradation of these compounds and in their utilization as carbon and energy sources, or in the rescue of pyrimidine bases for nucleotide synthesis
D9C14_07290	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
D9C14_07295	COG0274	Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy- D-ribose 5-phosphate
D9C14_07300	COG2390	Transcriptional regulator
D9C14_07310	COG3192	ethanolamine utilization protein
D9C14_07315	COG2079	MmgE PrpD family protein
D9C14_07325	COG1126	abc transporter atp-binding protein
D9C14_07330	COG0765	amino acid transport
D9C14_07335	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
D9C14_07355	COG3049	Linear amide C-N hydrolases, choloylglycine hydrolase family
D9C14_07360	COG0561	phosphatase activity
D9C14_07390	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
D9C14_07395	COG5294	Protein conserved in bacteria
D9C14_07400	COG0577	efflux transmembrane transporter activity
D9C14_07405	COG1136	(ABC) transporter
D9C14_07410	COG2205	protein histidine kinase activity
D9C14_07415	COG0745	RESPONSE REGULATOR receiver
D9C14_07420	COG0191	fructose-bisphosphate aldolase activity
D9C14_07425	COG1082	Xylose isomerase domain protein TIM barrel
D9C14_07430	COG1082	Xylose isomerase domain protein TIM barrel
D9C14_07435	COG0673	inositol 2-dehydrogenase activity
D9C14_07440	COG2814	Major facilitator Superfamily
D9C14_07445	COG1082	Xylose isomerase domain protein TIM barrel
D9C14_07450	COG3962	Belongs to the TPP enzyme family
D9C14_07455	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
D9C14_07465	COG1012	belongs to the aldehyde dehydrogenase family
D9C14_07470	COG1349	DNA-binding transcription factor activity
D9C14_07475	COG0667	Aldo Keto reductase
D9C14_07490	COG2814	Major facilitator Superfamily
D9C14_07495	COG0326	Molecular chaperone. Has ATPase activity
D9C14_07505	COG1028	Short-chain dehydrogenase reductase Sdr
D9C14_07510	COG1309	transcriptional regulator
D9C14_07515	COG1012	belongs to the aldehyde dehydrogenase family
D9C14_07525	COG1520	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
D9C14_07535	COG1714	RDD family
D9C14_07540	COG2311	Membrane
D9C14_07545	COG1917	Cupin 2, conserved barrel domain protein
D9C14_07550	COG1309	transcriptional regulator
D9C14_07555	COG1028	Short-chain dehydrogenase reductase Sdr
D9C14_07560	COG1846	Transcriptional regulator
D9C14_07565	COG1380	Effector of murein hydrolase LrgA
D9C14_07570	COG1346	cytolysis
D9C14_07575	COG5039	Polysaccharide pyruvyl transferase
D9C14_07580	COG1929	Belongs to the glycerate kinase type-1 family
D9C14_07585	COG1802	Transcriptional regulator
D9C14_07590	COG1070	Carbohydrate kinase
D9C14_07595	COG2610	gluconate transmembrane transporter activity
D9C14_07600	COG0362	Catalyzes the oxidative decarboxylation of 6- phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH
D9C14_07605	COG0450	alkyl hydroperoxide reductase
D9C14_07610	COG3634	alkyl hydroperoxide reductase activity
D9C14_07620	COG2723	6-phospho-beta-galactosidase activity
D9C14_07625	COG2190	(PTS) system
D9C14_07630	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
D9C14_07630	COG1263	PTS System
D9C14_07630	COG2190	(PTS) system
D9C14_07635	COG2188	Transcriptional regulator
D9C14_07645	COG3855	fructose 1,6-bisphosphate 1-phosphatase activity
D9C14_07680	COG1576	Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA
D9C14_07695	COG1063	alcohol dehydrogenase
D9C14_07715	COG3863	Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family
D9C14_07720	COG0456	acetyltransferase
D9C14_07725	COG0457	Tetratricopeptide repeat
D9C14_07735	COG0010	Belongs to the arginase family
D9C14_07740	COG0833	amino acid
D9C14_07745	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
D9C14_07750	COG3829	transcription factor binding
D9C14_07755	COG5002	protein histidine kinase activity
D9C14_07780	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
D9C14_07785	COG1235	May be involved in the transport of PQQ or its precursor to the periplasm
D9C14_07790	COG4853	Protein conserved in bacteria
D9C14_07795	COG4863	YycH protein
D9C14_07800	COG5002	protein histidine kinase activity
D9C14_07805	COG0745	RESPONSE REGULATOR receiver
D9C14_07835	COG0346	lactoylglutathione lyase activity
D9C14_07840	COG0305	Participates in initiation and elongation during chromosome replication
D9C14_07855	COG3093	addiction module antidote protein HigA
D9C14_07860	COG2807	transmembrane transport
D9C14_07865	COG1807	4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family
D9C14_07870	COG0359	binds to the 23S rRNA
D9C14_07875	COG3887	signaling protein consisting of a modified GGDEF domain and a DHH domain
D9C14_07880	COG4241	membrane
D9C14_07890	COG5577	PFAM Coat F domain
D9C14_07895	COG1733	regulation of RNA biosynthetic process
D9C14_07900	COG1227	inorganic diphosphatase activity
D9C14_07910	COG2271	Major facilitator Superfamily
D9C14_07915	COG4978	Transcriptional regulator
D9C14_07915	COG0789	Transcriptional regulator
D9C14_07925	COG4319	ketosteroid isomerase
D9C14_07930	COG1357	PFAM Pentapeptide repeats (8 copies)
D9C14_07935	COG2814	Major facilitator Superfamily
D9C14_07940	COG0583	DNA-binding transcription factor activity
D9C14_07945	COG2153	protein acetylation
D9C14_07960	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
D9C14_07965	COG1846	Transcriptional regulator
D9C14_07970	COG2153	protein acetylation
D9C14_07975	COG2364	Membrane
D9C14_07980	COG0456	acetyltransferase
D9C14_07985	COG2315	Protein conserved in bacteria
D9C14_07990	COG0262	Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis
D9C14_08000	COG2814	Major facilitator Superfamily
D9C14_08010	COG1331	Highly conserved protein containing a thioredoxin domain
D9C14_08015	COG1266	CAAX protease self-immunity
D9C14_08020	COG0477	Major facilitator Superfamily
D9C14_08020	COG2814	Major facilitator Superfamily
D9C14_08025	COG0110	maltose O-acetyltransferase activity
D9C14_08030	COG0346	lactoylglutathione lyase activity
D9C14_08035	COG1609	Transcriptional regulator
D9C14_08040	COG0708	Exodeoxyribonuclease III
D9C14_08045	COG0238	Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit
D9C14_08050	COG0629	single-stranded DNA binding
D9C14_08055	COG0360	Binds together with S18 to 16S ribosomal RNA
D9C14_08060	COG0012	GTP binding
D9C14_08065	COG0243	molybdopterin cofactor binding
D9C14_08070	COG4481	Protein conserved in bacteria
D9C14_08075	COG3949	Membrane
D9C14_08085	COG1475	DNA binding
D9C14_08090	COG1192	Involved in chromosome partitioning
D9C14_08100	COG1475	DNA binding
D9C14_08105	COG0357	Ribosomal RNA small subunit methyltransferase G
D9C14_08110	COG0445	tRNA wobble uridine modification
D9C14_08115	COG0486	Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34
D9C14_08120	COG1847	R3H domain protein
D9C14_08125	COG0706	membrane insertase activity
D9C14_08130	COG0594	ribonuclease P activity
D9C14_08135	COG0230	Belongs to the bacterial ribosomal protein bL34 family
D9C14_08140	COG0593	it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids
D9C14_08145	COG0592	DNA-directed DNA polymerase activity
D9C14_08150	COG2501	S4 domain
D9C14_08155	COG1195	it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
D9C14_08165	COG0187	DNA topoisomerase II activity
D9C14_08170	COG0188	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
D9C14_08205	COG0516	GMP reductase activity
D9C14_08205	COG0517	IMP dehydrogenase activity
D9C14_08210	COG1686	Belongs to the peptidase S11 family
D9C14_08215	COG0214	Catalyzes the formation of pyridoxal 5'-phosphate from ribose 5-phosphate (RBP), glyceraldehyde 3-phosphate (G3P) and ammonia. The ammonia is provided by the PdxT subunit. Can also use ribulose 5-phosphate and dihydroxyacetone phosphate as substrates, resulting from enzyme-catalyzed isomerization of RBP and G3P, respectively
D9C14_08220	COG0311	Catalyzes the hydrolysis of glutamine to glutamate and ammonia as part of the biosynthesis of pyridoxal 5'-phosphate. The resulting ammonia molecule is channeled to the active site of PdxS
D9C14_08230	COG0172	Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec)
D9C14_08240	COG1428	Deoxynucleoside kinase
D9C14_08245	COG1428	Deoxynucleoside kinase
D9C14_08250	COG1388	LysM domain
D9C14_08250	COG3858	chitin binding
D9C14_08255	COG1335	isochorismatase
D9C14_08260	COG0590	tRNA wobble adenosine to inosine editing
D9C14_08270	COG2812	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
D9C14_08275	COG0718	Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection
D9C14_08280	COG0353	May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO
D9C14_08325	COG4915	5-bromo-4-chloroindolyl phosphate hydrolysis protein
D9C14_08330	COG3853	Toxic anion resistance protein (TelA)
D9C14_08335	COG1982	Orn Lys Arg decarboxylase major
D9C14_08340	COG0125	Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
D9C14_08345	COG3870	Protein conserved in bacteria
D9C14_08350	COG1728	Protein conserved in bacteria
D9C14_08355	COG0470	DNA polymerase III
D9C14_08360	COG1774	PSP1 C-terminal conserved region
D9C14_08365	COG4467	Involved in initiation control of chromosome replication
D9C14_08370	COG4123	Specifically methylates the adenine in position 37 of tRNA(1)(Val) (anticodon cmo5UAC)
D9C14_08375	COG2827	Endonuclease containing a URI domain
D9C14_08380	COG0313	Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
D9C14_08385	COG2002	toxin-antitoxin pair type II binding
D9C14_08390	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
D9C14_08390	COG0143	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
D9C14_08395	COG0084	hydrolase, TatD family'
D9C14_08400	COG3583	domain protein
D9C14_08400	COG3584	3D domain protein
D9C14_08405	COG1658	Required for correct processing of both the 5' and 3' ends of 5S rRNA precursor. Cleaves both sides of a double-stranded region yielding mature 5S rRNA in one step
D9C14_08410	COG0030	16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase activity
D9C14_08420	COG4466	Protein conserved in bacteria
D9C14_08430	COG1947	Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol
D9C14_08435	COG0503	Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
D9C14_08440	COG0251	oxidation-reduction process
D9C14_08445	COG2088	sporulation resulting in formation of a cellular spore
D9C14_08450	COG1207	Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain
D9C14_08455	COG0462	Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
D9C14_08460	COG1825	This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance
D9C14_08465	COG0193	aminoacyl-tRNA hydrolase activity
D9C14_08475	COG1197	Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
D9C14_08480	COG2002	toxin-antitoxin pair type II binding
D9C14_08485	COG2244	polysaccharide biosynthetic process
D9C14_08490	COG3956	TIGRFAM MazG family protein
D9C14_08495	COG1188	Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit, (S4 paralog))
D9C14_08510	COG2919	Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic
D9C14_08515	COG1098	S1 RNA binding domain
D9C14_08530	COG2208	phosphoserine phosphatase activity
D9C14_08535	COG2304	oxidoreductase activity
D9C14_08540	COG0515	serine threonine protein kinase
D9C14_08545	COG0037	tRNA processing
D9C14_08555	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
D9C14_08560	COG1521	Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis
D9C14_08565	COG1281	Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress
D9C14_08570	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
D9C14_08575	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
D9C14_08580	COG0147	Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
D9C14_08585	COG0512	Glutamine amidotransferase of anthranilate synthase
D9C14_08590	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
D9C14_08595	COG0294	Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives
D9C14_08600	COG1539	Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin
D9C14_08605	COG0801	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
D9C14_08610	COG1396	sequence-specific DNA binding
D9C14_08615	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
D9C14_08620	COG1190	Belongs to the class-II aminoacyl-tRNA synthetase family
D9C14_08700	COG4463	regulation of RNA biosynthetic process
D9C14_08705	COG3880	PFAM UvrB UvrC protein
D9C14_08710	COG3869	Catalyzes the specific phosphorylation of arginine residues in
D9C14_08715	COG0542	response to heat
D9C14_08720	COG1066	DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function
D9C14_08725	COG1623	Has also diadenylate cyclase activity, catalyzing the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP). c- di-AMP acts as a signaling molecule that couples DNA integrity with progression of sporulation. The rise in c-di-AMP level generated by DisA while scanning the chromosome, operates as a positive signal that advances sporulation
D9C14_08730	COG4956	integral membrane protein (PIN domain superfamily)
D9C14_08735	COG1211	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity
D9C14_08740	COG0245	2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase activity
D9C14_08745	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
D9C14_08755	COG1045	serine acetyltransferase
D9C14_08760	COG0215	cysteine-tRNA ligase activity
D9C14_08765	COG1939	Involved in correct processing of both the 5' and 3' ends of 23S rRNA precursor. Processes 30S rRNA precursor transcript even in absence of ribonuclease 3 (Rnc)
D9C14_08770	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
D9C14_08775	COG3688	RNA-binding protein containing a PIN domain
D9C14_08780	COG1595	DNA-templated transcription, initiation
D9C14_08785	COG0267	Belongs to the bacterial ribosomal protein bL33 family
D9C14_08790	COG0690	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
D9C14_08795	COG0250	Participates in transcription elongation, termination and antitermination
D9C14_08800	COG0080	Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors
D9C14_08805	COG0081	regulation of translation
D9C14_08810	COG0244	Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors
D9C14_08815	COG0222	ribosome binding
D9C14_08820	COG2813	Specifically methylates the guanine in position
D9C14_08825	COG0085	RNA polymerase activity
D9C14_08830	COG0086	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
D9C14_08835	COG1358	cellular component organization or biogenesis
D9C14_08840	COG0048	Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit
D9C14_08845	COG0049	tRNA binding
D9C14_08850	COG0480	Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
D9C14_08855	COG0050	This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
D9C14_08860	COG0596	Alpha beta hydrolase
D9C14_08865	COG0051	transcription antitermination factor activity, RNA binding
D9C14_08870	COG0087	One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit
D9C14_08875	COG0088	Forms part of the polypeptide exit tunnel
D9C14_08880	COG0089	rRNA binding
D9C14_08885	COG0090	One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity
D9C14_08890	COG0185	Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA
D9C14_08895	COG0091	The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome
D9C14_08900	COG0092	Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation
D9C14_08905	COG0197	Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs
D9C14_08910	COG0255	Belongs to the universal ribosomal protein uL29 family
D9C14_08915	COG0186	One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA
D9C14_08920	COG0093	Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome
D9C14_08930	COG0094	This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits
D9C14_08940	COG0096	One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit
D9C14_08945	COG0097	This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center
D9C14_08950	COG0256	This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance
D9C14_08955	COG0098	Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body
D9C14_08960	COG1841	ribosomal large subunit assembly
D9C14_08965	COG0200	Binds to the 23S rRNA
D9C14_08970	COG0201	protein transport
D9C14_08975	COG0563	adenylate kinase activity
D9C14_08980	COG0024	Methionine aminopeptidase
D9C14_08985	COG2163	COG2163 Ribosomal protein L14E L6E L27E
D9C14_08990	COG0361	One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex
D9C14_08995	COG0257	Belongs to the bacterial ribosomal protein bL36 family
D9C14_09000	COG0099	Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits
D9C14_09005	COG0100	Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome
D9C14_09010	COG0202	RNA polymerase activity
D9C14_09015	COG0203	ribosomal protein L17
D9C14_09020	COG1122	ATPase activity
D9C14_09025	COG1122	ATPase activity
D9C14_09030	COG0619	Transmembrane (T) component of an energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
D9C14_09035	COG0101	tRNA pseudouridine synthase activity
D9C14_09040	COG0102	This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly
D9C14_09045	COG0103	maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
D9C14_09050	COG2226	methyltransferase
D9C14_09060	COG0860	N-Acetylmuramoyl-L-alanine amidase
D9C14_09065	COG0489	protein tyrosine kinase activity
D9C14_09075	COG2194	sulfuric ester hydrolase activity
D9C14_09080	COG0726	polysaccharide deacetylase
D9C14_09165	COG0659	secondary active sulfate transmembrane transporter activity
D9C14_09170	COG0385	Bile acid
D9C14_09175	COG2819	hydrolase of the alpha beta superfamily
D9C14_09180	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
D9C14_09185	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
D9C14_09190	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
D9C14_09195	COG2207	Transcriptional regulator
D9C14_09195	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
D9C14_09200	COG3876	Protein conserved in bacteria
D9C14_09205	COG1472	Belongs to the glycosyl hydrolase 3 family
D9C14_09210	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
D9C14_09215	COG1263	PTS System
D9C14_09215	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
D9C14_09220	COG1737	Transcriptional regulator
D9C14_09225	COG2103	Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6- phosphate and D-lactate
D9C14_09230	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
D9C14_09235	COG1683	Conserved Protein
D9C14_09265	COG1595	DNA-templated transcription, initiation
D9C14_09270	COG5662	AntiSigma factor
D9C14_09275	COG1624	Catalyzes the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria
D9C14_09280	COG4856	YbbR-like protein
D9C14_09285	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
D9C14_09290	COG0449	glutamine-fructose-6-phosphate transaminase (isomerizing) activity
D9C14_09300	COG0122	3-methyladenine DNA glycosylase 8-oxoguanine DNA glycosylase
D9C14_09305	COG2169	Transcriptional regulator
D9C14_09310	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
D9C14_09315	COG1009	NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit
D9C14_09320	COG3002	Belongs to the UPF0753 family
D9C14_09325	COG0288	reversible hydration of carbon dioxide
D9C14_09335	COG5609	conserved protein (DUF2294)
D9C14_09340	COG0640	Transcriptional regulator
D9C14_09345	COG2814	Major facilitator Superfamily
D9C14_09360	COG1404	Belongs to the peptidase S8 family
D9C14_09380	COG1132	(ABC) transporter
D9C14_09385	COG0596	Alpha beta hydrolase
D9C14_09390	COG0745	RESPONSE REGULATOR receiver
D9C14_09395	COG0642	Histidine kinase
D9C14_09405	COG0515	serine threonine protein kinase
D9C14_09420	COG1113	amino acid transport
D9C14_09435	COG2602	Beta-lactamase
D9C14_09440	COG2124	cytochrome p450
D9C14_09450	COG0531	amino acid
D9C14_09455	COG0584	glycerophosphoryl diester phosphodiesterase
D9C14_09460	COG2271	Major facilitator Superfamily
D9C14_09475	COG0456	acetyltransferase
D9C14_09475	COG1846	Transcriptional regulator
D9C14_09480	COG2271	Major facilitator Superfamily
D9C14_09490	COG3409	Peptidoglycan-binding domain 1 protein
D9C14_09495	COG0697	spore germination
D9C14_09500	COG1917	Cupin 2, conserved barrel domain protein
D9C14_09500	COG2207	Transcriptional regulator
D9C14_09505	COG0027	Involved in the de novo purine biosynthesis. Catalyzes the transfer of formate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR). Formate is provided by PurU via hydrolysis of 10-formyl-tetrahydrofolate
D9C14_09510	COG3591	Belongs to the peptidase S1B family
D9C14_09520	COG0596	Alpha beta hydrolase
D9C14_09525	COG1183	phosphatidylcholine synthase activity
D9C14_09530	COG0586	Pfam SNARE associated Golgi protein
D9C14_09535	COG0688	phosphatidylethanolamine metabolic process
D9C14_09550	COG1301	dicarboxylic acid transport
D9C14_09555	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
D9C14_09555	COG2190	(PTS) system
D9C14_09555	COG1263	PTS System
D9C14_09560	COG0363	glucosamine-6-phosphate deaminase activity
D9C14_09575	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
D9C14_09580	COG0833	amino acid
D9C14_09585	COG2040	homocysteine
D9C14_09595	COG1115	amino acid carrier protein
D9C14_09600	COG2066	Belongs to the glutaminase family
D9C14_09605	COG4191	Histidine kinase
D9C14_09610	COG0784	Response regulator, receiver
D9C14_09620	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
D9C14_09625	COG1012	belongs to the aldehyde dehydrogenase family
D9C14_09630	COG2271	Major facilitator Superfamily
D9C14_09635	COG4948	Mandelate Racemase Muconate Lactonizing
D9C14_09640	COG2186	Transcriptional regulator
D9C14_09645	COG2721	sulfolactate sulfo-lyase activity
D9C14_09650	COG3173	Aminoglycoside phosphotransferase
D9C14_09660	COG0697	spore germination
D9C14_09665	COG0745	RESPONSE REGULATOR receiver
D9C14_09670	COG2205	protein histidine kinase activity
D9C14_09675	COG1131	(ABC) transporter
D9C14_09695	COG3773	Cell wall hydrolase
D9C14_09700	COG2304	oxidoreductase activity
D9C14_09710	COG3540	Alkaline phosphatase
D9C14_09715	COG1826	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
D9C14_09720	COG0805	protein transport
D9C14_09725	COG2039	Removes 5-oxoproline from various penultimate amino acid residues except L-proline
D9C14_09730	COG0520	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
D9C14_09735	COG0477	Major facilitator Superfamily
D9C14_09740	COG1309	transcriptional regulator
D9C14_09745	COG0252	asparaginase activity
D9C14_09750	COG1075	acetyltransferases and hydrolases with the alpha beta hydrolase fold
D9C14_09755	COG1714	RDD family
D9C14_09760	COG3012	SEC-C Motif Domain Protein
D9C14_09760	COG1405	negative regulation of cell septum assembly
D9C14_09765	COG3290	protein histidine kinase activity
D9C14_09770	COG3279	Response regulator of the LytR AlgR family
D9C14_09775	COG4555	ABC transporter
D9C14_09780	COG1668	transmembrane transport
D9C14_09785	COG0667	Aldo Keto reductase
D9C14_09800	COG1595	DNA-templated transcription, initiation
D9C14_09805	COG1595	DNA-templated transcription, initiation
D9C14_09810	COG1876	peptidase activity
D9C14_09815	COG0457	Tetratricopeptide repeat
D9C14_09820	COG1028	Short-chain dehydrogenase reductase Sdr
D9C14_09825	COG0366	Alpha amylase catalytic
D9C14_09830	COG0803	Belongs to the bacterial solute-binding protein 9 family
D9C14_09835	COG1121	(ABC) transporter
D9C14_09840	COG1108	ABC-type Mn2 Zn2 transport systems permease components
D9C14_09845	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
D9C14_09850	COG2310	stress, protein
D9C14_09855	COG2310	stress, protein
D9C14_09860	COG2310	stress, protein
D9C14_09865	COG0861	Integral membrane protein TerC family
D9C14_09875	COG3853	Toxic anion resistance protein (TelA)
D9C14_09880	COG0477	Major facilitator Superfamily
D9C14_09890	COG2814	Major facilitator Superfamily
D9C14_09895	COG0640	Transcriptional regulator
D9C14_09900	COG4175	Glycine betaine
D9C14_09900	COG0517	IMP dehydrogenase activity
D9C14_09905	COG4176	ABC-type proline glycine betaine transport system permease component
D9C14_09910	COG2113	Glycine betaine
D9C14_09915	COG1473	amidohydrolase
D9C14_09920	COG1288	antiporter activity
D9C14_09930	COG0366	Alpha amylase catalytic
D9C14_09935	COG0039	L-malate dehydrogenase activity
D9C14_09940	COG1620	l-lactate permease
D9C14_09945	COG2814	Major facilitator Superfamily
D9C14_09950	COG1846	Transcriptional regulator
D9C14_09955	COG1280	lysine exporter protein (LysE YggA)
D9C14_09960	COG3403	YqcI/YcgG family
D9C14_09965	COG1113	amino acid transport
D9C14_09970	COG3665	Urea carboxylase-associated protein
D9C14_09975	COG0171	NAD+ synthase (glutamine-hydrolyzing) activity
D9C14_09980	COG1660	Displays ATPase and GTPase activities
D9C14_09985	COG0703	Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate
D9C14_09990	COG2226	methyltransferase
D9C14_09995	COG0583	DNA-binding transcription factor activity
D9C14_10000	COG3458	cephalosporin-C deacetylase activity
D9C14_10005	COG3541	Predicted nucleotidyltransferase
D9C14_10010	COG0506	proline dehydrogenase activity
D9C14_10015	COG1012	belongs to the aldehyde dehydrogenase family
D9C14_10020	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
D9C14_10025	COG2508	Transcriptional regulator
D9C14_10030	COG3689	TIGRFAM TIGR03943 family protein
D9C14_10035	COG0701	Predicted permease
D9C14_10040	COG2267	carboxylic ester hydrolase activity
D9C14_10045	COG0492	ferredoxin-NADP+ reductase activity
D9C14_10050	COG1587	Uroporphyrinogen-III synthase
D9C14_10050	COG0007	Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme
D9C14_10055	COG2146	nitrite reductase [NAD(P)H] activity
D9C14_10060	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
D9C14_10065	COG0243	molybdopterin cofactor binding
D9C14_10070	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
D9C14_10075	COG2223	nitrite transmembrane transporter activity
D9C14_10080	COG1469	GTP cyclohydrolase I activity
D9C14_10085	COG1376	ErfK ybiS ycfS ynhG family protein
D9C14_10095	COG0523	cobalamin synthesis protein
D9C14_10100	COG0765	amino acid transport
D9C14_10105	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
D9C14_10115	COG1714	RDD family
D9C14_10125	COG2723	6-phospho-beta-galactosidase activity
D9C14_10135	COG3209	COG3209 Rhs family protein
D9C14_10140	COG3290	protein histidine kinase activity
D9C14_10140	COG0840	transmembrane signaling receptor activity
D9C14_10145	COG0794	Belongs to the SIS family. GutQ KpsF subfamily
D9C14_10150	COG0269	3-dehydro-L-gulonate-6-phosphate decarboxylase activity
D9C14_10155	COG1733	regulation of RNA biosynthetic process
D9C14_10160	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
D9C14_10165	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
D9C14_10170	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
D9C14_10175	COG3208	Thioesterase involved in non-ribosomal peptide biosynthesis
D9C14_10180	COG2814	Major facilitator Superfamily
D9C14_10190	COG0697	spore germination
D9C14_10205	COG2364	Membrane
D9C14_10210	COG1126	abc transporter atp-binding protein
D9C14_10215	COG0765	amino acid transport
D9C14_10220	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
D9C14_10225	COG0583	DNA-binding transcription factor activity
D9C14_10230	COG0163	prenyltransferase activity
D9C14_10235	COG0043	3-octaprenyl-4-hydroxybenzoate carboxy-lyase activity
D9C14_10250	COG0596	Alpha beta hydrolase
D9C14_10255	COG3104	oligopeptide transport
D9C14_10260	COG5434	Belongs to the glycosyl hydrolase 28 family
D9C14_10270	COG0697	spore germination
D9C14_10280	COG1457	Belongs to the purine-cytosine permease (2.A.39) family
D9C14_10285	COG1136	(ABC) transporter
D9C14_10295	COG0745	RESPONSE REGULATOR receiver
D9C14_10300	COG5002	protein histidine kinase activity
D9C14_10300	COG3850	Histidine kinase
D9C14_10305	COG0457	Tetratricopeptide repeat
D9C14_10325	COG0527	aspartate kinase activity
D9C14_10330	COG4606	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
D9C14_10335	COG4605	iron ion homeostasis
D9C14_10340	COG4604	ABC transporter, ATP-binding protein
D9C14_10345	COG4607	ABC-type enterochelin transport system periplasmic component
D9C14_10350	COG2814	Major facilitator Superfamily
D9C14_10355	COG1309	transcriptional regulator
D9C14_10360	COG0778	Nitroreductase
D9C14_10365	COG1359	(4S)-4-hydroxy-5-phosphonooxypentane-2,3-dione isomerase activity
D9C14_10370	COG0640	Transcriptional regulator
D9C14_10375	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
D9C14_10380	COG0160	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
D9C14_10385	COG1012	belongs to the aldehyde dehydrogenase family
D9C14_10390	COG4975	Glucose uptake
D9C14_10395	COG1028	Short-chain dehydrogenase reductase Sdr
D9C14_10400	COG4549	nuclear export factor GLE1
D9C14_10405	COG1276	copper resistance
D9C14_10405	COG2372	response to copper ion
D9C14_10410	COG1349	DNA-binding transcription factor activity
D9C14_10420	COG2213	PTS system mannitol-specific
D9C14_10425	COG4668	phosphoenolpyruvate-dependent sugar phosphotransferase system
D9C14_10430	COG0246	Mannitol dehydrogenase
D9C14_10435	COG0473	3-isopropylmalate dehydrogenase activity
D9C14_10440	COG0681	Belongs to the peptidase S26 family
D9C14_10445	COG0412	Dienelactone hydrolase
D9C14_10450	COG0764	3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity
D9C14_10460	COG0561	phosphatase activity
D9C14_10465	COG1540	5-oxoprolinase (ATP-hydrolyzing) activity
D9C14_10470	COG1914	H( )-stimulated, divalent metal cation uptake system
D9C14_10475	COG4336	lyase activity
D9C14_10480	COG2049	5-oxoprolinase (ATP-hydrolyzing) activity
D9C14_10485	COG1984	allophanate hydrolase subunit 2
D9C14_10490	COG1414	Transcriptional regulator
D9C14_10495	COG2755	lipolytic protein G-D-S-L family
D9C14_10505	COG2329	Antibiotic biosynthesis monooxygenase
D9C14_10510	COG0768	penicillin binding
D9C14_10515	COG4989	oxidoreductase activity
D9C14_10520	COG3711	transcriptional antiterminator
D9C14_10525	COG0318	PFAM AMP-dependent synthetase and ligase
D9C14_10530	COG2226	methyltransferase
D9C14_10535	COG1028	Short-chain dehydrogenase reductase Sdr
D9C14_10540	COG1917	Cupin 2, conserved barrel domain protein
D9C14_10545	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
D9C14_10550	COG3871	stress protein (general stress protein 26)
D9C14_10560	COG2814	Major facilitator Superfamily
D9C14_10565	COG1522	sequence-specific DNA binding
D9C14_10570	COG0551	DNA topoisomerase type I activity
D9C14_10570	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
D9C14_10575	COG3405	Belongs to the glycosyl hydrolase 8 (cellulase D) family
D9C14_10580	COG3706	GGDEF domain
D9C14_10585	COG5298	Protein conserved in bacteria
D9C14_10590	COG1215	transferase activity, transferring glycosyl groups
D9C14_10600	COG0531	amino acid
D9C14_10605	COG0494	nUDIX hydrolase
D9C14_10610	COG0028	Belongs to the TPP enzyme family
D9C14_10625	COG1914	H( )-stimulated, divalent metal cation uptake system
D9C14_10630	COG2261	transglycosylase associated protein
D9C14_10635	COG4876	unkown
D9C14_10640	COG2217	Heavy metal translocating P-type atpase
D9C14_10645	COG3729	General stress protein
D9C14_10650	COG0662	Cupin 2, conserved barrel domain protein
D9C14_10655	COG2329	Antibiotic biosynthesis monooxygenase
D9C14_10660	COG3546	catalase activity
D9C14_10665	COG1638	TRAP-type C4-dicarboxylate transport system periplasmic component
D9C14_10670	COG3290	protein histidine kinase activity
D9C14_10675	COG4565	transcriptional regulatory protein
D9C14_10680	COG1301	dicarboxylic acid transport
D9C14_10685	COG0628	permease
D9C14_10690	COG1131	(ABC) transporter
D9C14_10695	COG1277	ABC-type transport system involved in multi-copper enzyme maturation permease component
D9C14_10705	COG1960	acyl-CoA dehydrogenase activity
D9C14_10720	COG0053	Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family
D9C14_10725	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
D9C14_10730	COG1181	Belongs to the D-alanine--D-alanine ligase family
D9C14_10735	COG0770	UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity
D9C14_10745	COG0513	Belongs to the DEAD box helicase family
D9C14_10750	COG3402	PFAM membrane-flanked domain
D9C14_10755	COG3428	Bacterial PH domain
D9C14_10760	COG0705	Rhomboid family
D9C14_10765	COG0736	holo-[acyl-carrier-protein] synthase activity
D9C14_10770	COG2834	Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane)
D9C14_10775	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
D9C14_10780	COG0864	Transcriptional regulator
D9C14_10785	COG2337	Toxic component of a toxin-antitoxin (TA) module
D9C14_10790	COG1366	Belongs to the anti-sigma-factor antagonist family
D9C14_10795	COG1366	Belongs to the anti-sigma-factor antagonist family
D9C14_10800	COG2172	sigma factor antagonist activity
D9C14_10805	COG2208	phosphoserine phosphatase activity
D9C14_10810	COG1366	Belongs to the anti-sigma-factor antagonist family
D9C14_10815	COG2172	sigma factor antagonist activity
D9C14_10820	COG1191	sigma factor activity
D9C14_10825	COG2208	phosphoserine phosphatase activity
D9C14_10830	COG2183	response to ionizing radiation
D9C14_10840	COG3091	SprT-like family
D9C14_10885	COG1476	TRANSCRIPTIONal
D9C14_10910	COG0693	protein deglycase activity
D9C14_10915	COG1278	Cold shock
D9C14_10920	COG1329	Transcriptional regulator
D9C14_10930	COG0697	spore germination
D9C14_10935	COG2207	Transcriptional regulator
D9C14_10935	COG1917	Cupin 2, conserved barrel domain protein
D9C14_10940	COG0697	spore germination
D9C14_10945	COG2207	Transcriptional regulator
D9C14_10945	COG3708	Transcriptional regulator
D9C14_10950	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
D9C14_10955	COG0477	Major facilitator Superfamily
D9C14_10965	COG4430	Bacteriocin-protection, YdeI or OmpD-Associated
D9C14_10980	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
D9C14_10985	COG1309	transcriptional regulator
D9C14_10990	COG0697	spore germination
D9C14_10995	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
D9C14_11000	COG2030	dehydratase
D9C14_11005	COG3545	Serine hydrolase
D9C14_11010	COG1733	regulation of RNA biosynthetic process
D9C14_11015	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
D9C14_11020	COG2814	Major facilitator Superfamily
D9C14_11025	COG1309	transcriptional regulator
D9C14_11035	COG0640	Transcriptional regulator
D9C14_11040	COG1055	Involved in arsenical resistance. Thought to form the channel of an arsenite pump
D9C14_11050	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
D9C14_11055	COG0697	spore germination
D9C14_11060	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
D9C14_11065	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
D9C14_11070	COG0640	Transcriptional regulator
D9C14_11075	COG2128	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
D9C14_11090	COG4585	Histidine kinase
D9C14_11095	COG2197	response regulator
D9C14_11100	COG2409	Drug exporters of the RND superfamily
D9C14_11105	COG0596	Alpha beta hydrolase
D9C14_11110	COG1811	Na channel or pump
D9C14_11115	COG0789	Transcriptional regulator
D9C14_11115	COG4978	Transcriptional regulator
D9C14_11120	COG0053	Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family
D9C14_11125	COG0778	Nitroreductase
D9C14_11130	COG0346	lactoylglutathione lyase activity
D9C14_11135	COG2259	Doxx family
D9C14_11140	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
D9C14_11155	COG2323	membrane
D9C14_11160	COG2323	membrane
D9C14_11165	COG0071	Belongs to the small heat shock protein (HSP20) family
D9C14_11180	COG1309	transcriptional regulator
D9C14_11190	COG0456	acetyltransferase
D9C14_11200	COG1113	amino acid transport
D9C14_11205	COG2318	DinB family
D9C14_11210	COG1846	Transcriptional regulator
D9C14_11215	COG1033	growth of symbiont in host cell
D9C14_11215	COG2409	Drug exporters of the RND superfamily
D9C14_11220	COG0778	Nitroreductase
D9C14_11225	COG1846	Transcriptional regulator
D9C14_11230	COG2814	Major facilitator Superfamily
D9C14_11235	COG0730	response to heat
D9C14_11240	COG1802	Transcriptional regulator
D9C14_11245	COG1388	LysM domain
D9C14_11245	COG3858	chitin binding
D9C14_11250	COG1819	glycosyl
D9C14_11260	COG1785	Belongs to the alkaline phosphatase family
D9C14_11265	COG5646	InterPro IPR014922
D9C14_11275	COG0454	-acetyltransferase
D9C14_11280	COG1078	dGTPase activity
D9C14_11285	COG1388	LysM domain
D9C14_11290	COG2814	Major facilitator Superfamily
D9C14_11295	COG1440	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
D9C14_11300	COG1447	Phosphotransferase system cellobiose-specific component IIA
D9C14_11305	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
D9C14_11310	COG2723	6-phospho-beta-galactosidase activity
D9C14_11315	COG2188	Transcriptional regulator
D9C14_11320	COG1940	carbohydrate kinase activity
D9C14_11325	COG1482	cell wall glycoprotein biosynthetic process
D9C14_11330	COG4124	Belongs to the glycosyl hydrolase 26 family
D9C14_11375	COG0611	Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1
D9C14_11380	COG0802	atpase or kinase
D9C14_11385	COG1214	PFAM Peptidase M22, glycoprotease
D9C14_11390	COG0456	acetyltransferase
D9C14_11395	COG0533	Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction
D9C14_11400	COG0488	(ABC) transporter
D9C14_11405	COG0315	cyclic pyranopterin monophosphate synthase activity
D9C14_11410	COG2344	Modulates transcription in response to changes in cellular NADH NAD( ) redox state
D9C14_11415	COG1826	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
D9C14_11420	COG0805	protein transport
D9C14_11435	COG1266	CAAX protease self-immunity
D9C14_11440	COG0234	Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter
D9C14_11445	COG0459	protein refolding
D9C14_11455	COG1073	alpha beta
D9C14_11460	COG0457	Tetratricopeptide repeat
D9C14_11465	COG1063	alcohol dehydrogenase
D9C14_11470	COG2211	Major facilitator Superfamily
D9C14_11475	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
D9C14_11480	COG1842	Phage shock protein A
D9C14_11485	COG1198	Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
D9C14_11490	COG1512	COG1512 Beta-propeller domains of methanol dehydrogenase type
D9C14_11495	COG4260	virion core protein, lumpy skin disease virus
D9C14_11505	COG2814	Major facilitator Superfamily
D9C14_11510	COG1063	alcohol dehydrogenase
D9C14_11515	COG0797	Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides
D9C14_11520	COG0823	Involved in the tonB-independent uptake of proteins
D9C14_11535	COG2267	carboxylic ester hydrolase activity
D9C14_11545	COG2132	Multicopper oxidase
D9C14_11550	COG1113	amino acid transport
D9C14_11560	COG0053	Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family
D9C14_11565	COG0714	Associated with various cellular activities
D9C14_11570	COG1721	protein (some members contain a von Willebrand factor type A (vWA) domain
D9C14_11575	COG1305	Transglutaminase-like
D9C14_11580	COG0519	Catalyzes the synthesis of GMP from XMP
D9C14_11580	COG0518	GMP synthase (glutamine-hydrolyzing) activity
D9C14_11585	COG2252	PERMEase
D9C14_11590	COG3064	Membrane
D9C14_11600	COG4843	Uncharacterized protein conserved in bacteria (DUF2179)
D9C14_11610	COG0041	Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR)
D9C14_11615	COG0026	Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR)
D9C14_11620	COG0015	Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
D9C14_11625	COG0152	phosphoribosylaminoimidazolesuccinocarboxamide synthase activity
D9C14_11630	COG1828	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
D9C14_11635	COG0047	phosphoribosylformylglycinamidine synthase activity
D9C14_11640	COG0046	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
D9C14_11645	COG0034	Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine
D9C14_11650	COG0150	phosphoribosylformylglycinamidine cyclo-ligase activity
D9C14_11655	COG0299	Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate
D9C14_11660	COG0138	bifunctional purine biosynthesis protein purh
D9C14_11665	COG0151	Belongs to the GarS family
D9C14_11670	COG1522	sequence-specific DNA binding
D9C14_11675	COG0531	amino acid
D9C14_11685	COG1001	Belongs to the metallo-dependent hydrolases superfamily. Adenine deaminase family
D9C14_11690	COG1470	cell adhesion involved in biofilm formation
D9C14_11695	COG4496	protein, YerC YecD
D9C14_11700	COG0069	glutamate synthase activity
D9C14_11705	COG1646	35 carbon atoms) to the C3 hydroxyl of sn-glycerol-1-phosphate (G1P), producing heptaprenylglyceryl phosphate (HepGP). This reaction is an ether-bond-formation step in the biosynthesis of archaea-type G1P-based membrane lipids found in Bacillales
D9C14_11710	COG0210	DNA helicase
D9C14_11715	COG0272	DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
D9C14_11720	COG4851	CamS sex pheromone cAM373 precursor
D9C14_11725	COG2334	A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response
D9C14_11730	COG1285	pathogenesis
D9C14_11735	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
D9C14_11740	COG0721	Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
D9C14_11745	COG0154	amidase activity
D9C14_11750	COG0064	Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
D9C14_11755	COG1309	transcriptional regulator
D9C14_11760	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
D9C14_11765	COG1597	lipid kinase activity
D9C14_11770	COG2265	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
D9C14_11780	COG0457	Tetratricopeptide repeat
D9C14_11795	COG5444	nuclease activity
D9C14_11800	COG3391	amine dehydrogenase activity
D9C14_11805	COG0457	Tetratricopeptide repeat
D9C14_11815	COG0217	transcriptional regulatory protein
D9C14_11825	COG1309	transcriptional regulator
D9C14_11830	COG3631	Ketosteroid isomerase-related protein
D9C14_11835	COG0702	epimerase
D9C14_11850	COG3546	catalase activity
D9C14_11855	COG0454	-acetyltransferase
D9C14_11865	COG5578	integral membrane protein
D9C14_11870	COG2972	Histidine kinase
D9C14_11875	COG4753	response regulator
D9C14_11875	COG2207	Transcriptional regulator
D9C14_11880	COG1653	transport
D9C14_11885	COG1175	transmembrane transport
D9C14_11890	COG0395	ABC-type sugar transport system, permease component
D9C14_11895	COG4225	unsaturated rhamnogalacturonyl hydrolase activity
D9C14_11900	COG2207	Transcriptional regulator
D9C14_11905	COG2755	lipolytic protein G-D-S-L family
D9C14_11915	COG5578	integral membrane protein
D9C14_11920	COG3401	FG-GAP repeat protein
D9C14_11925	COG3401	FG-GAP repeat protein
D9C14_11930	COG2755	lipolytic protein G-D-S-L family
D9C14_11935	COG1874	Beta-galactosidase
D9C14_11945	COG1653	transport
D9C14_11950	COG4209	transmembrane transport
D9C14_11955	COG0395	ABC-type sugar transport system, permease component
D9C14_11960	COG1486	melibiose metabolic process
D9C14_11965	COG2323	membrane
D9C14_11970	COG2329	Antibiotic biosynthesis monooxygenase
D9C14_11975	COG0346	lactoylglutathione lyase activity
D9C14_11990	COG5583	Uncharacterized small protein (DUF2292)
D9C14_11995	COG0670	Belongs to the BI1 family
D9C14_12000	COG0697	spore germination
D9C14_12005	COG1846	Transcriptional regulator
D9C14_12010	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
D9C14_12025	COG0369	Component of the sulfite reductase complex that catalyzes the 6-electron reduction of sulfite to sulfide. This is one of several activities required for the biosynthesis of L- cysteine from sulfate. The flavoprotein component catalyzes the electron flow from NADPH - FAD - FMN to the hemoprotein component
D9C14_12025	COG2124	cytochrome p450
D9C14_12040	COG1368	sulfuric ester hydrolase activity
D9C14_12045	COG1208	COG1208 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis translation initiation factor 2B, gamma epsilon subunits eIF-2Bgamma eIF-2Bepsilon
D9C14_12050	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
D9C14_12055	COG1442	glycosyl transferase family 8
D9C14_12060	COG1216	Glycosyl transferase, family 2
D9C14_12065	COG1442	glycosyl transferase family 8
D9C14_12070	COG2223	nitrite transmembrane transporter activity
D9C14_12075	COG1011	Hydrolase
D9C14_12080	COG0531	amino acid
D9C14_12085	COG1012	belongs to the aldehyde dehydrogenase family
D9C14_12090	COG0840	transmembrane signaling receptor activity
D9C14_12095	COG0488	(ABC) transporter
D9C14_12105	COG0789	Transcriptional regulator
D9C14_12110	COG2814	Major facilitator Superfamily
D9C14_12120	COG0488	(ABC) transporter
D9C14_12125	COG0513	Belongs to the DEAD box helicase family
D9C14_12130	COG0456	acetyltransferase
D9C14_12135	COG2130	NADP-dependent
D9C14_12145	COG2211	Major facilitator Superfamily
D9C14_12150	COG1262	PFAM Formylglycine-generating sulfatase enzyme
D9C14_12155	COG1120	ATPase activity
D9C14_12160	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
D9C14_12165	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
D9C14_12170	COG4594	ABC-type Fe3 -citrate transport system, periplasmic component
D9C14_12185	COG3866	Pectate lyase
D9C14_12190	COG0471	metal ion transport
D9C14_12195	COG3290	protein histidine kinase activity
D9C14_12200	COG4565	transcriptional regulatory protein
D9C14_12205	COG3181	Tripartite tricarboxylate transporter family receptor
D9C14_12210	COG2851	Citrate transporter
D9C14_12215	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
D9C14_12220	COG4362	Belongs to the NOS family. Bacterial NOS oxygenase subfamily
D9C14_12225	COG1254	Belongs to the acylphosphatase family
D9C14_12230	COG2258	MOSC domain
D9C14_12250	COG0024	Methionine aminopeptidase
D9C14_12255	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
D9C14_12255	COG1263	PTS System
D9C14_12260	COG1368	sulfuric ester hydrolase activity
D9C14_12275	COG1115	amino acid carrier protein
D9C14_12280	COG0531	amino acid
D9C14_12300	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
D9C14_12300	COG1263	PTS System
D9C14_12305	COG0366	Alpha amylase catalytic
D9C14_12310	COG2188	Transcriptional regulator
D9C14_12315	COG0778	Nitroreductase
D9C14_12320	COG0737	Belongs to the 5'-nucleotidase family
D9C14_12325	COG0693	protein deglycase activity
D9C14_12330	COG2814	Major facilitator Superfamily
D9C14_12335	COG4840	Belongs to the UPF0435 family
D9C14_12340	COG0394	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
D9C14_12345	COG4980	gas vesicle protein
D9C14_12350	COG1295	ribonuclease BN
D9C14_12355	COG0477	Major facilitator Superfamily
D9C14_12360	COG0387	Pfam Sodium calcium exchanger
D9C14_12370	COG0668	transmembrane transport
D9C14_12375	COG0535	radical SAM domain protein
D9C14_12385	COG0726	polysaccharide deacetylase
D9C14_12390	COG2084	Dehydrogenase
D9C14_12395	COG0598	Magnesium transport protein CorA
D9C14_12400	COG0122	3-methyladenine DNA glycosylase 8-oxoguanine DNA glycosylase
D9C14_12405	COG2265	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
D9C14_12415	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
D9C14_12420	COG4637	Psort location Cytoplasmic, score
D9C14_12425	COG1071	oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor
D9C14_12430	COG0022	dehydrogenase e1 component
D9C14_12435	COG0508	dehydrogenase complex catalyzes the overall conversion of
D9C14_12440	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
D9C14_12445	COG3284	Transcriptional regulator
D9C14_12455	COG1742	UPF0060 membrane protein
D9C14_12475	COG4842	Belongs to the WXG100 family
D9C14_12480	COG1486	melibiose metabolic process
D9C14_12485	COG1737	Transcriptional regulator
D9C14_12490	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
D9C14_12490	COG1263	PTS System
D9C14_12495	COG5434	Belongs to the glycosyl hydrolase 28 family
D9C14_12500	COG1132	(ABC) transporter
D9C14_12505	COG1132	(ABC) transporter
D9C14_12510	COG2259	Doxx family
D9C14_12515	COG2514	catechol 2,3-dioxygenase activity
D9C14_12520	COG4585	Histidine kinase
D9C14_12525	COG2197	response regulator
D9C14_12530	COG1131	(ABC) transporter
D9C14_12535	COG0842	Transport permease protein
D9C14_12535	COG1511	domain protein
D9C14_12540	COG0842	Transport permease protein
D9C14_12545	COG1695	Transcriptional regulator
D9C14_12550	COG1075	acetyltransferases and hydrolases with the alpha beta hydrolase fold
D9C14_12555	COG3936	Protein involved in polysaccharide intercellular adhesin (PIA) synthesis biofilm formation
D9C14_12560	COG2318	DinB family
D9C14_12565	COG2814	Major facilitator Superfamily
D9C14_12570	COG1846	Transcriptional regulator
D9C14_12575	COG2898	Catalyzes the transfer of a lysyl group from L-lysyl- tRNA(Lys) to membrane-bound phosphatidylglycerol (PG), which produces lysylphosphatidylglycerol (LPG), a major component of the bacterial membrane with a positive net charge. LPG synthesis contributes to bacterial virulence as it is involved in the resistance mechanism against cationic antimicrobial peptides (CAMP) produces by the host's immune system (defensins, cathelicidins) and by the competing microorganisms
D9C14_12575	COG0392	lysyltransferase activity
D9C14_12580	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
D9C14_12585	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
D9C14_12590	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
D9C14_12595	COG0384	phenazine biosynthesis protein PhzF
D9C14_12600	COG0778	Nitroreductase
D9C14_12615	COG1090	epimerase
D9C14_12620	COG2137	regulation of response to DNA damage stimulus
D9C14_12630	COG2814	Major facilitator Superfamily
D9C14_12645	COG3103	Sh3 type 3 domain protein
D9C14_12650	COG5658	integral membrane protein
D9C14_12655	COG0596	Alpha beta hydrolase
D9C14_12660	COG0463	Glycosyl transferase, family 2
D9C14_12665	COG4485	Bacterial membrane protein, YfhO
D9C14_12670	COG1988	membrane-bound metal-dependent
D9C14_12675	COG1194	a g-specific adenine glycosylase
D9C14_12685	COG1028	Short-chain dehydrogenase reductase Sdr
D9C14_12700	COG3557	Belongs to the UPF0374 family
D9C14_12705	COG1132	(ABC) transporter
D9C14_12710	COG4129	membrane
D9C14_12715	COG0001	glutamate-1-semialdehyde 2,1-aminomutase activity
D9C14_12720	COG1225	Alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen
D9C14_12725	COG0735	belongs to the Fur family
D9C14_12835	COG4326	sporulation control protein
D9C14_12845	COG5577	PFAM Coat F domain
D9C14_12850	COG3340	Belongs to the peptidase S51 family
D9C14_12855	COG0422	Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction
D9C14_12860	COG0277	FAD linked oxidase domain protein
D9C14_12870	COG0753	catalase activity
D9C14_12875	COG1116	anion transmembrane transporter activity
D9C14_12880	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
D9C14_12885	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
D9C14_12890	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
D9C14_12900	COG0199	Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
D9C14_12910	COG1476	TRANSCRIPTIONal
D9C14_12920	COG3382	B3 4 domain protein
D9C14_12925	COG1600	Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr)
D9C14_12935	COG0219	Methylates the ribose at the nucleotide 34 wobble position in the two leucyl isoacceptors tRNA(Leu)(CmAA) and tRNA(Leu)(cmnm5UmAA). Catalyzes the methyl transfer from S- adenosyl-L-methionine to the 2'-OH of the wobble nucleotide
D9C14_12940	COG0789	Transcriptional regulator
D9C14_12945	COG1664	Polymer-forming cytoskeletal
D9C14_12950	COG1664	Polymer-forming cytoskeletal
D9C14_12955	COG2766	serine protein kinase
D9C14_12960	COG2718	Belongs to the UPF0229 family
D9C14_12965	COG1846	Transcriptional regulator
D9C14_12970	COG1566	PFAM secretion protein HlyD family protein
D9C14_12975	COG2814	Major facilitator Superfamily
D9C14_12980	COG0655	NAD(P)H dehydrogenase (quinone) activity
D9C14_13000	COG1725	Transcriptional regulator
D9C14_13005	COG1131	(ABC) transporter
D9C14_13010	COG1131	(ABC) transporter
D9C14_13015	COG1277	ABC-type transport system involved in multi-copper enzyme maturation permease component
D9C14_13020	COG1278	Cold shock
D9C14_13030	COG1464	Belongs to the NlpA lipoprotein family
D9C14_13035	COG3706	GGDEF domain
D9C14_13040	COG1823	symporter activity
D9C14_13060	COG5577	PFAM Coat F domain
D9C14_13065	COG0737	Belongs to the 5'-nucleotidase family
D9C14_13065	COG4085	toxin activity
D9C14_13065	COG1525	nuclease
D9C14_13070	COG3764	Sortase (surface protein transpeptidase)
D9C14_13075	COG0564	pseudouridine synthase activity
D9C14_13085	COG0517	IMP dehydrogenase activity
D9C14_13090	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
D9C14_13095	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
D9C14_13095	COG3153	acetyltransferase
D9C14_13100	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
D9C14_13105	COG1954	Regulates expression of the glpD operon. In the presence of glycerol 3-phosphate (G3P) causes antitermination of transcription of glpD at the inverted repeat of the leader region to enhance its transcription. Binds and stabilizes glpD leader mRNA
D9C14_13110	COG0580	Belongs to the MIP aquaporin (TC 1.A.8) family
D9C14_13115	COG0554	Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
D9C14_13120	COG0578	Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family
D9C14_13125	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
D9C14_13130	COG4585	Histidine kinase
D9C14_13130	COG2203	Gaf domain
D9C14_13135	COG2197	response regulator
D9C14_13140	COG0431	NADPH-dependent FMN reductase
D9C14_13155	COG0791	NLP P60 protein
D9C14_13155	COG1388	LysM domain
D9C14_13160	COG1959	2 iron, 2 sulfur cluster binding
D9C14_13165	COG0668	transmembrane transport
D9C14_13170	COG2719	SpoVR family
D9C14_13175	COG1785	Belongs to the alkaline phosphatase family
D9C14_13180	COG1388	LysM domain
D9C14_13180	COG0791	NLP P60 protein
D9C14_13185	COG0583	DNA-binding transcription factor activity
D9C14_13190	COG0372	Belongs to the citrate synthase family
D9C14_13195	COG1028	Short-chain dehydrogenase reductase Sdr
D9C14_13200	COG0531	amino acid
D9C14_13205	COG0733	neurotransmitter:sodium symporter activity
D9C14_13210	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
D9C14_13230	COG1595	DNA-templated transcription, initiation
D9C14_13235	COG0667	Aldo Keto reductase
D9C14_13240	COG0204	Acyl-transferase
D9C14_13245	COG1253	flavin adenine dinucleotide binding
D9C14_13250	COG0789	Transcriptional regulator
D9C14_13255	COG0436	Aminotransferase
D9C14_13260	COG1253	flavin adenine dinucleotide binding
D9C14_13265	COG0239	Important for reducing fluoride concentration in the cell, thus reducing its toxicity
D9C14_13270	COG0239	Important for reducing fluoride concentration in the cell, thus reducing its toxicity
D9C14_13275	COG0584	glycerophosphoryl diester phosphodiesterase
D9C14_13285	COG0668	transmembrane transport
D9C14_13290	COG0846	NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form
D9C14_13295	COG0726	polysaccharide deacetylase
D9C14_13300	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
D9C14_13305	COG1757	Na H antiporter
D9C14_13310	COG0589	response to stress
D9C14_13320	COG1132	(ABC) transporter
D9C14_13325	COG1132	(ABC) transporter
D9C14_13330	COG0702	epimerase
D9C14_13350	COG0189	ligase activity
D9C14_13355	COG0189	ligase activity
D9C14_13360	COG4399	Belongs to the UPF0754 family
D9C14_13365	COG3679	Belongs to the UPF0342 family
D9C14_13370	COG4335	DNA alkylation repair
D9C14_13375	COG0561	phosphatase activity
D9C14_13380	COG0635	Involved in the biosynthesis of porphyrin-containing compound
D9C14_13385	COG0475	glutathione-regulated potassium exporter activity
D9C14_13390	COG0490	domain, Protein
D9C14_13400	COG1024	Enoyl-CoA hydratase
D9C14_13410	COG4152	abc transporter atp-binding protein
D9C14_13415	COG1668	transmembrane transport
D9C14_13420	COG0420	3'-5' exonuclease activity
D9C14_13425	COG4717	serine-type aminopeptidase activity
D9C14_13430	COG3481	metal-dependent phosphohydrolase, HD sub domain
D9C14_13440	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
D9C14_13470	COG1846	Transcriptional regulator
D9C14_13475	COG4980	gas vesicle protein
D9C14_13490	COG1932	Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine
D9C14_13495	COG0537	adenosine 5'-monophosphoramidase activity
D9C14_13500	COG1131	(ABC) transporter
D9C14_13505	COG4473	ABC transporter
D9C14_13515	COG1473	amidohydrolase
D9C14_13520	COG3069	C4-dicarboxylate transmembrane transporter activity
D9C14_13530	COG2329	Antibiotic biosynthesis monooxygenase
D9C14_13535	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
D9C14_13540	COG0407	Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III
D9C14_13555	COG1309	transcriptional regulator
D9C14_13560	COG1511	domain protein
D9C14_13565	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
D9C14_13570	COG4377	Putative membrane peptidase family (DUF2324)
D9C14_13580	COG1363	Peptidase, m42
D9C14_13585	COG4405	Protein conserved in bacteria
D9C14_13590	COG1301	dicarboxylic acid transport
D9C14_13600	COG1234	tRNA 3'-trailer cleavage
D9C14_13605	COG0095	Lipoate-protein ligase
D9C14_13610	COG0702	epimerase
D9C14_13615	COG0318	PFAM AMP-dependent synthetase and ligase
D9C14_13625	COG0501	Belongs to the peptidase M48B family
D9C14_13630	COG1404	Belongs to the peptidase S8 family
D9C14_13640	COG0604	alcohol dehydrogenase
D9C14_13645	COG4594	ABC-type Fe3 -citrate transport system, periplasmic component
D9C14_13650	COG0406	alpha-ribazole phosphatase activity
D9C14_13655	COG0183	Belongs to the thiolase family
D9C14_13660	COG0318	PFAM AMP-dependent synthetase and ligase
D9C14_13665	COG1268	BioY protein
D9C14_13670	COG0840	transmembrane signaling receptor activity
D9C14_13675	COG0723	plastoquinol--plastocyanin reductase activity
D9C14_13675	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
D9C14_13680	COG1028	Short-chain dehydrogenase reductase Sdr
D9C14_13690	COG4903	ComK protein
D9C14_13695	COG1028	Short-chain dehydrogenase reductase Sdr
D9C14_13705	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
D9C14_13720	COG0398	Pfam SNARE associated Golgi protein
D9C14_13725	COG0681	Belongs to the peptidase S26 family
D9C14_13730	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
D9C14_13735	COG1846	Transcriptional regulator
D9C14_13740	COG0738	Major facilitator superfamily
D9C14_13745	COG0673	inositol 2-dehydrogenase activity
D9C14_13750	COG0561	phosphatase activity
D9C14_13755	COG0399	UDP-4-amino-4-deoxy-L-arabinose aminotransferase
D9C14_13760	COG1609	Transcriptional regulator
D9C14_13765	COG3180	Ammonia monooxygenase
D9C14_13770	COG0477	Major facilitator Superfamily
D9C14_13770	COG2814	Major facilitator Superfamily
D9C14_13775	COG4533	DNA binding
D9C14_13785	COG1633	Catalyzes the formation of the isocyclic ring in chlorophyll biosynthesis. Mediates the cyclase reaction, which results in the formation of divinylprotochlorophyllide (Pchlide) characteristic of all chlorophylls from magnesium-protoporphyrin IX 13-monomethyl ester (MgPMME)
D9C14_13790	COG3857	The heterodimer acts as both an ATP-dependent DNA helicase and an ATP-dependent, dual-direction single-stranded exonuclease. Recognizes the chi site generating a DNA molecule suitable for the initiation of homologous recombination
D9C14_13795	COG1074	ATP-dependent DNA helicase activity
D9C14_13800	COG0420	3'-5' exonuclease activity
D9C14_13805	COG0419	ATPase involved in DNA repair
D9C14_13810	COG1403	HNH endonuclease
D9C14_13850	COG5337	Spore coat protein CotH
D9C14_13855	COG0179	Fumarylacetoacetate (FAA) hydrolase
D9C14_13865	COG1404	Belongs to the peptidase S8 family
D9C14_13875	COG0367	asparagine synthase
D9C14_13880	COG2318	DinB family
D9C14_13885	COG1562	ergosterol biosynthetic process
D9C14_13890	COG0534	Mate efflux family protein
D9C14_13895	COG2207	Transcriptional regulator
D9C14_13895	COG1917	Cupin 2, conserved barrel domain protein
D9C14_13900	COG1609	Transcriptional regulator
D9C14_13905	COG0673	inositol 2-dehydrogenase activity
D9C14_13910	COG2318	DinB family
D9C14_13915	COG1279	arginine transmembrane transporter activity
D9C14_13920	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
D9C14_13925	COG1357	PFAM Pentapeptide repeats (8 copies)
D9C14_13930	COG2267	carboxylic ester hydrolase activity
D9C14_13935	COG0529	Catalyzes the synthesis of activated sulfate
D9C14_13940	COG2046	Belongs to the sulfate adenylyltransferase family
D9C14_13945	COG0175	sulfate reduction
D9C14_13950	COG2045	Belongs to the ComB family
D9C14_13955	COG1809	phosphosulfolactate synthase activity
D9C14_13960	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
D9C14_13965	COG4948	Mandelate Racemase Muconate Lactonizing
D9C14_13970	COG2814	Major facilitator Superfamily
D9C14_13975	COG0454	-acetyltransferase
D9C14_13980	COG2153	protein acetylation
D9C14_13985	COG0685	methylenetetrahydrofolate reductase (NAD(P)H) activity
D9C14_13985	COG0646	methionine synthase
D9C14_13990	COG1666	GTP binding
D9C14_13995	COG2996	Protein conserved in bacteria
D9C14_14015	COG1695	Transcriptional regulator
D9C14_14030	COG3227	Zinc metalloprotease (Elastase)
D9C14_14035	COG1307	EDD domain protein, DegV family
D9C14_14040	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
D9C14_14055	COG0561	phosphatase activity
D9C14_14060	COG1073	alpha beta
D9C14_14065	COG2151	metal-sulfur cluster biosynthetic enzyme
D9C14_14075	COG0277	FAD linked oxidase domain protein
D9C14_14080	COG2271	Major facilitator Superfamily
D9C14_14085	COG0002	Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde
D9C14_14100	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
D9C14_14105	COG0505	Belongs to the CarA family
D9C14_14110	COG0458	carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity
D9C14_14115	COG0078	Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
D9C14_14130	COG2267	carboxylic ester hydrolase activity
D9C14_14140	COG1744	ABC transporter substrate-binding protein PnrA-like
D9C14_14155	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
D9C14_14160	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
D9C14_14165	COG5504	Zn-dependent protease
D9C14_14170	COG0444	Belongs to the ABC transporter superfamily
D9C14_14175	COG4608	Belongs to the ABC transporter superfamily
D9C14_14185	COG0601	transmembrane transport
D9C14_14190	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
D9C14_14200	COG0180	Tryptophanyl-tRNA synthetase
D9C14_14205	COG4166	transmembrane transport
D9C14_14210	COG0601	transmembrane transport
D9C14_14220	COG0444	Belongs to the ABC transporter superfamily
D9C14_14225	COG4608	Belongs to the ABC transporter superfamily
D9C14_14230	COG2814	Major facilitator Superfamily
D9C14_14235	COG0456	acetyltransferase
D9C14_14240	COG1393	Belongs to the ArsC family
D9C14_14245	COG0861	Integral membrane protein TerC family
D9C14_14255	COG4862	establishment of competence for transformation
D9C14_14265	COG4469	Competence protein
D9C14_14270	COG1164	Oligoendopeptidase f
D9C14_14290	COG2346	COG2346, Truncated hemoglobins
D9C14_14295	COG0741	lytic transglycosylase activity
D9C14_14300	COG4116	CYTH
D9C14_14310	COG2357	RelA SpoT domain protein
D9C14_14315	COG0061	Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
D9C14_14320	COG0564	pseudouridine synthase activity
D9C14_14325	COG0639	Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP
D9C14_14330	COG0569	domain protein
D9C14_14330	COG0475	glutathione-regulated potassium exporter activity
D9C14_14335	COG0819	Catalyzes an amino-pyrimidine hydrolysis reaction at the C5' of the pyrimidine moiety of thiamine compounds, a reaction that is part of a thiamine salvage pathway
D9C14_14340	COG0352	thiamine-phosphate diphosphorylase activity
D9C14_14345	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
D9C14_14350	COG2104	thiamine diphosphate biosynthetic process
D9C14_14355	COG2022	thiamine diphosphate biosynthetic process
D9C14_14360	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
D9C14_14365	COG0351	phosphomethylpyrimidine kinase
D9C14_14370	COG0623	enoyl-[acyl-carrier-protein] reductase (NADH) activity
D9C14_14425	COG0210	DNA helicase
D9C14_14435	COG2153	protein acetylation
D9C14_14440	COG1514	Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'- phosphomonoester
D9C14_14445	COG2382	esterase
D9C14_14450	COG0626	cystathionine gamma-synthase activity
D9C14_14455	COG0626	cystathionine gamma-synthase activity
D9C14_14465	COG5505	Protein of unknown function (DUF819)
D9C14_14490	COG5444	nuclease activity
D9C14_14535	COG1359	(4S)-4-hydroxy-5-phosphonooxypentane-2,3-dione isomerase activity
D9C14_14540	COG1028	Short-chain dehydrogenase reductase Sdr
D9C14_14550	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
D9C14_14550	COG3711	transcriptional antiterminator
D9C14_14555	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
D9C14_14555	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
D9C14_14555	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
D9C14_14560	COG1482	cell wall glycoprotein biosynthetic process
D9C14_14570	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
D9C14_14580	COG2606	Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
D9C14_14600	COG0109	protoheme IX farnesyltransferase activity
D9C14_14610	COG0726	polysaccharide deacetylase
D9C14_14625	COG5504	Zn-dependent protease
D9C14_14630	COG2205	protein histidine kinase activity
D9C14_14640	COG3383	formate dehydrogenase (NAD+) activity
D9C14_14645	COG2427	Protein of unknown function (DUF1641)
D9C14_14655	COG1051	belongs to the nudix hydrolase family
D9C14_14665	COG2124	cytochrome p450
D9C14_14670	COG1819	glycosyl
D9C14_14680	COG1587	Uroporphyrinogen-III synthase
D9C14_14685	COG0390	transport system, permease component
D9C14_14690	COG1117	ATPase-coupled phosphate ion transmembrane transporter activity
D9C14_14695	COG0697	spore germination
D9C14_14700	COG4297	protein containing double-stranded beta helix domain
D9C14_14710	COG1252	NADH dehydrogenase
D9C14_14715	COG1904	glucuronate isomerase
D9C14_14720	COG2211	Major facilitator Superfamily
D9C14_14725	COG2055	Belongs to the LDH2 MDH2 oxidoreductase family
D9C14_14730	COG1063	alcohol dehydrogenase
D9C14_14735	COG1312	Catalyzes the dehydration of D-mannonate
D9C14_14740	COG1028	Short-chain dehydrogenase reductase Sdr
D9C14_14745	COG2271	Major facilitator Superfamily
D9C14_14750	COG1609	Transcriptional regulator
D9C14_14755	COG0246	Mannitol dehydrogenase
D9C14_14760	COG2721	sulfolactate sulfo-lyase activity
D9C14_14765	COG0730	response to heat
D9C14_14770	COG2318	DinB family
D9C14_14775	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
D9C14_14780	COG0457	Tetratricopeptide repeat
D9C14_14790	COG2350	Protein conserved in bacteria
D9C14_14795	COG5632	N-Acetylmuramoyl-L-alanine amidase
D9C14_14795	COG3409	Peptidoglycan-binding domain 1 protein
D9C14_14795	COG1388	LysM domain
D9C14_14805	COG4195	phage-related replication protein
D9C14_14810	COG3546	catalase activity
D9C14_14815	COG2856	Zn peptidase
D9C14_14820	COG1396	sequence-specific DNA binding
D9C14_14830	COG1522	sequence-specific DNA binding
D9C14_14835	COG1484	DNA-dependent DNA replication
D9C14_14855	COG1595	DNA-templated transcription, initiation
D9C14_14860	COG5484	DNA packaging
D9C14_14860	COG3728	DNA packaging
D9C14_14865	COG1783	phage Terminase large subunit
D9C14_14870	COG5518	Phage portal protein
D9C14_14875	COG0338	D12 class N6 adenine-specific DNA methyltransferase
D9C14_14880	COG4653	Phage capsid family
D9C14_14930	COG5412	phage tail tape measure protein
D9C14_14930	COG5412	phage tail tape measure protein
D9C14_14930	COG3953	SLT domain
D9C14_14930	COG3953	SLT domain
D9C14_14935	COG1652	LysM domain
D9C14_14940	COG4193	domain, Protein
D9C14_14950	COG3628	GPW Gp25 family protein
D9C14_14955	COG3299	homolog of phage Mu protein gp47
D9C14_14960	COG3778	Protein conserved in bacteria
D9C14_15000	COG5632	N-Acetylmuramoyl-L-alanine amidase
D9C14_15000	COG3409	Peptidoglycan-binding domain 1 protein
D9C14_15020	COG0306	phosphate transporter
D9C14_15025	COG1392	Phosphate transport regulator
D9C14_15030	COG0531	amino acid
D9C14_15035	COG0346	lactoylglutathione lyase activity
D9C14_15040	COG1807	4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family
D9C14_15045	COG0463	Glycosyl transferase, family 2
D9C14_15050	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
D9C14_15055	COG0345	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
D9C14_15060	COG2362	D-Aminopeptidase
D9C14_15065	COG0601	transmembrane transport
D9C14_15070	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
D9C14_15075	COG0444	Belongs to the ABC transporter superfamily
D9C14_15080	COG4166	transmembrane transport
D9C14_15085	COG1619	proteins homologs of microcin C7 resistance protein MccF
D9C14_15090	COG4948	Mandelate Racemase Muconate Lactonizing
D9C14_15095	COG0791	NLP P60 protein
D9C14_15100	COG4608	Belongs to the ABC transporter superfamily
D9C14_15105	COG2706	6-phosphogluconolactonase activity
D9C14_15110	COG1834	amidinotransferase
D9C14_15115	COG1607	acyl-coa hydrolase
D9C14_15120	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
D9C14_15120	COG1017	nitric oxide dioxygenase activity
D9C14_15130	COG2323	membrane
D9C14_15135	COG2318	DinB family
D9C14_15140	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
D9C14_15145	COG2076	Multidrug Resistance protein
D9C14_15150	COG2076	Multidrug Resistance protein
D9C14_15155	COG0788	formyltetrahydrofolate deformylase activity
D9C14_15160	COG0263	Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate
D9C14_15165	COG0014	Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5- carboxylate
D9C14_15170	COG1764	response to oxidative stress
D9C14_15175	COG1846	Transcriptional regulator
D9C14_15180	COG1764	response to oxidative stress
D9C14_15190	COG0590	tRNA wobble adenosine to inosine editing
D9C14_15195	COG0620	Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation
D9C14_15200	COG1404	Belongs to the peptidase S8 family
D9C14_15205	COG1366	Belongs to the anti-sigma-factor antagonist family
D9C14_15210	COG0619	Transmembrane (T) component of an energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
D9C14_15215	COG1122	ATPase activity
D9C14_15220	COG4721	ABC-type cobalt transport system, permease component
D9C14_15230	COG0745	RESPONSE REGULATOR receiver
D9C14_15235	COG5002	protein histidine kinase activity
D9C14_15235	COG3850	Histidine kinase
D9C14_15240	COG3212	peptidase
D9C14_15245	COG3212	peptidase
D9C14_15260	COG2239	Acts as a magnesium transporter
D9C14_15265	COG0789	Transcriptional regulator
D9C14_15280	COG1846	Transcriptional regulator
D9C14_15285	COG0707	Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
D9C14_15290	COG0726	polysaccharide deacetylase
D9C14_15295	COG1408	metallophosphoesterase
D9C14_15305	COG0463	Glycosyl transferase, family 2
D9C14_15310	COG3285	dna ligase
D9C14_15310	COG1793	dna ligase
D9C14_15315	COG1273	With LigD forms a non-homologous end joining (NHEJ) DNA repair enzyme, which repairs dsDNA breaks with reduced fidelity. Binds linear dsDNA with 5'- and 3'- overhangs but not closed circular dsDNA nor ssDNA. Recruits and stimulates the ligase activity of LigD
D9C14_15320	COG3300	MHYT domain
D9C14_15320	COG5001	Diguanylate cyclase
D9C14_15325	COG0586	Pfam SNARE associated Golgi protein
D9C14_15330	COG0861	Integral membrane protein TerC family
D9C14_15335	COG1191	sigma factor activity
D9C14_15355	COG0501	Belongs to the peptidase M48B family
D9C14_15360	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
D9C14_15375	COG3594	Acyltransferase
D9C14_15380	COG5002	protein histidine kinase activity
D9C14_15385	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
D9C14_15395	COG0182	Catalyzes the interconversion of methylthioribose-1- phosphate (MTR-1-P) into methylthioribulose-1-phosphate (MTRu-1- P)
D9C14_15400	COG4857	Catalyzes the phosphorylation of methylthioribose into methylthioribose-1-phosphate
D9C14_15405	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
D9C14_15410	COG0436	Aminotransferase
D9C14_15415	COG1850	ribulose-bisphosphate carboxylase activity
D9C14_15420	COG4359	Dephosphorylates 2-hydroxy-3-keto-5-methylthiopentenyl- 1-phosphate (HK-MTPenyl-1-P) yielding 1,2-dihydroxy-3-keto-5- methylthiopentene (DHK-MTPene)
D9C14_15425	COG0235	Class ii aldolase
D9C14_15430	COG1791	Catalyzes 2 different reactions between oxygene and the acireductone 1,2-dihydroxy-3-keto-5-methylthiopentene (DHK-MTPene) depending upon the metal bound in the active site. Fe-containing acireductone dioxygenase (Fe-ARD) produces formate and 2-keto-4- methylthiobutyrate (KMTB), the alpha-ketoacid precursor of methionine in the methionine recycle pathway. Ni-containing acireductone dioxygenase (Ni-ARD) produces methylthiopropionate, carbon monoxide and formate, and does not lie on the methionine recycle pathway
D9C14_15435	COG3339	Conserved Protein
D9C14_15450	COG3852	Histidine kinase
D9C14_15460	COG1846	Transcriptional regulator
D9C14_15465	COG1360	Flagellar Motor Protein
D9C14_15470	COG1291	archaeal or bacterial-type flagellum-dependent cell motility
D9C14_15475	COG0542	response to heat
D9C14_15480	COG3949	Membrane
D9C14_15485	COG0603	Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0))
D9C14_15490	COG0720	synthase
D9C14_15495	COG0602	queuosine metabolic process
D9C14_15500	COG0780	Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1)
D9C14_15505	COG1733	regulation of RNA biosynthetic process
D9C14_15510	COG1028	Short-chain dehydrogenase reductase Sdr
D9C14_15515	COG1388	LysM domain
D9C14_15515	COG4641	Protein conserved in bacteria
D9C14_15520	COG1388	LysM domain
D9C14_15525	COG3858	chitin binding
D9C14_15535	COG4873	Protein conserved in bacteria
D9C14_15550	COG3773	Cell wall hydrolase
D9C14_15555	COG2244	polysaccharide biosynthetic process
D9C14_15560	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
D9C14_15565	COG2217	Heavy metal translocating P-type atpase
D9C14_15575	COG0006	proline dipeptidase activity
D9C14_15580	COG1609	Transcriptional regulator
D9C14_15585	COG3711	transcriptional antiterminator
D9C14_15590	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
D9C14_15590	COG2190	(PTS) system
D9C14_15590	COG1263	PTS System
D9C14_15595	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
D9C14_15600	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
D9C14_15610	COG1533	DNA photolyase activity
D9C14_15615	COG0456	acetyltransferase
D9C14_15620	COG0840	transmembrane signaling receptor activity
D9C14_15625	COG2084	Dehydrogenase
D9C14_15630	COG2340	Cysteine-rich secretory protein family
D9C14_15635	COG0768	penicillin binding
D9C14_15640	COG4191	Histidine kinase
D9C14_15645	COG0436	Aminotransferase
D9C14_15655	COG0784	Response regulator, receiver
D9C14_15655	COG0835	chemotaxis
D9C14_15665	COG2814	Major facilitator Superfamily
D9C14_15670	COG1376	ErfK ybiS ycfS ynhG family protein
D9C14_15675	COG1408	metallophosphoesterase
D9C14_15680	COG1028	Short-chain dehydrogenase reductase Sdr
D9C14_15685	COG2200	EAL domain
D9C14_15690	COG4703	Protein of unknown function (DUF1797)
D9C14_15695	COG1978	Selenoprotein B, glycine betaine sarcosine D-proline reductase family
D9C14_15705	COG0517	IMP dehydrogenase activity
D9C14_15710	COG0583	DNA-binding transcription factor activity
D9C14_15715	COG0716	FMN binding
D9C14_15725	COG0716	FMN binding
D9C14_15730	COG2171	N-acyltransferase activity
D9C14_15735	COG1473	amidohydrolase
D9C14_15745	COG0668	transmembrane transport
D9C14_15750	COG0450	alkyl hydroperoxide reductase
D9C14_15755	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
D9C14_15770	COG0746	molybdenum cofactor guanylyltransferase activity
D9C14_15775	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
D9C14_15780	COG0303	'Molybdopterin
D9C14_15785	COG1763	Mo-molybdopterin cofactor biosynthetic process
D9C14_15790	COG0314	molybdopterin synthase activity
D9C14_15795	COG1977	Involved in sulfur transfer in the conversion of molybdopterin precursor Z to molybdopterin
D9C14_15800	COG1132	(ABC) transporter
D9C14_15805	COG1132	(ABC) transporter
D9C14_15815	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
D9C14_15820	COG1136	(ABC) transporter
D9C14_15825	COG0577	efflux transmembrane transporter activity
D9C14_15830	COG1349	DNA-binding transcription factor activity
D9C14_15835	COG1105	Belongs to the carbohydrate kinase PfkB family
D9C14_15840	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
D9C14_15840	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
D9C14_15840	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
D9C14_15845	COG0681	Belongs to the peptidase S26 family
D9C14_15855	COG0488	(ABC) transporter
D9C14_15860	COG1893	Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
D9C14_15865	COG2309	aminopeptidase activity
D9C14_15875	COG1077	Cell shape determining protein MreB Mrl
D9C14_15880	COG2002	toxin-antitoxin pair type II binding
D9C14_15885	COG3852	Histidine kinase
D9C14_15890	COG3703	Catalyzes the cleavage of glutathione into 5-oxo-L- proline and a Cys-Gly dipeptide. Acts specifically on glutathione, but not on other gamma-glutamyl peptides
D9C14_15890	COG2105	PFAM AIG2 family protein
D9C14_15895	COG0569	domain protein
D9C14_15900	COG1001	Belongs to the metallo-dependent hydrolases superfamily. Adenine deaminase family
D9C14_15905	COG0595	An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
D9C14_15915	COG0561	phosphatase activity
D9C14_15920	COG0242	peptide deformylase activity
D9C14_15930	COG0497	DNA recombination
D9C14_15935	COG1071	oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor
D9C14_15940	COG0022	dehydrogenase e1 component
D9C14_15945	COG0508	dehydrogenase complex catalyzes the overall conversion of
D9C14_15950	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
D9C14_15955	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
D9C14_15965	COG1982	Orn Lys Arg decarboxylase major
D9C14_15970	COG4476	Belongs to the UPF0223 family
D9C14_15975	COG4493	Belongs to the UPF0637 family
D9C14_15985	COG0483	inositol monophosphate 1-phosphatase activity
D9C14_15995	COG3315	Exhibits S-adenosyl-L-methionine-dependent methyltransferase activity
D9C14_16015	COG1595	DNA-templated transcription, initiation
D9C14_16045	COG4896	Protein conserved in bacteria
D9C14_16055	COG1875	ATPase related to phosphate starvation-inducible protein PhoH
D9C14_16060	COG2041	Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. The catalytic subunit MsrP is non-stereospecific, being able to reduce both (R-) and (S-) diastereoisomers of methionine sulfoxide
D9C14_16065	COG2066	Belongs to the glutaminase family
D9C14_16070	COG4838	Belongs to the UPF0358 family
D9C14_16075	COG0772	Belongs to the SEDS family
D9C14_16080	COG1038	Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second
D9C14_16085	COG1612	heme a metabolic process
D9C14_16090	COG0109	protoheme IX farnesyltransferase activity
D9C14_16095	COG2010	Cytochrome c
D9C14_16095	COG1622	oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor
D9C14_16100	COG0843	Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B
D9C14_16105	COG1845	cytochrome c oxidase, subunit III
D9C14_16110	COG3125	oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor
D9C14_16115	COG3336	cytochrome c oxidase
D9C14_16125	COG2905	signal-transduction protein containing cAMP-binding and CBS domains
D9C14_16130	COG2340	Cysteine-rich secretory protein family
D9C14_16145	COG3679	Belongs to the UPF0342 family
D9C14_16150	COG4471	UPF0298 protein
D9C14_16155	COG0742	ribosomal rna small subunit methyltransferase
D9C14_16160	COG0669	Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate
D9C14_16165	COG3314	Sporulation integral membrane protein YlbJ
D9C14_16170	COG1752	Esterase of the alpha-beta hydrolase superfamily
D9C14_16175	COG3480	Lon protease (S16) C-terminal proteolytic domain
D9C14_16180	COG1323	Belongs to the UPF0348 family
D9C14_16190	COG1399	metal-binding, possibly nucleic acid-binding protein
D9C14_16195	COG0333	Belongs to the bacterial ribosomal protein bL32 family
D9C14_16205	COG0454	-acetyltransferase
D9C14_16210	COG1893	Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
D9C14_16215	COG4365	Involved in bacillithiol (BSH) biosynthesis. May catalyze the last step of the pathway, the addition of cysteine to glucosamine malate (GlcN-Mal) to generate BSH
D9C14_16220	COG2001	Belongs to the MraZ family
D9C14_16225	COG0275	rRNA processing
D9C14_16230	COG4839	cell division protein FtsL
D9C14_16240	COG0768	penicillin binding
D9C14_16245	COG0769	Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
D9C14_16250	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
D9C14_16255	COG0771	Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA)
D9C14_16260	COG0772	Belongs to the SEDS family
D9C14_16265	COG0707	Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
D9C14_16270	COG0812	UDP-N-acetylmuramate dehydrogenase activity
D9C14_16275	COG1589	Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic. May control correct divisome assembly
D9C14_16280	COG3879	Bacterial protein of unknown function (DUF881)
D9C14_16285	COG3879	Bacterial protein of unknown function (DUF881)
D9C14_16290	COG3856	small basic protein
D9C14_16295	COG0849	cell division
D9C14_16300	COG0206	Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
D9C14_16305	COG4412	M6 family metalloprotease domain protein
D9C14_16305	COG1404	Belongs to the peptidase S8 family
D9C14_16315	COG1191	sigma factor activity
D9C14_16320	COG1191	sigma factor activity
D9C14_16325	COG1119	ATPase activity
D9C14_16330	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
D9C14_16335	COG1873	PFAM PRC-barrel domain
D9C14_16345	COG0325	Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis
D9C14_16350	COG1799	cell septum assembly
D9C14_16355	COG0762	integral membrane protein
D9C14_16360	COG2302	S4 RNA-binding domain
D9C14_16365	COG3599	regulation of cell shape
D9C14_16370	COG0060	amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)
D9C14_16375	COG1734	Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters
D9C14_16380	COG0597	This protein specifically catalyzes the removal of signal peptides from prolipoproteins
D9C14_16385	COG0564	pseudouridine synthase activity
D9C14_16390	COG2065	Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant
D9C14_16395	COG2233	PERMEase
D9C14_16400	COG0540	Belongs to the ATCase OTCase family
D9C14_16405	COG0044	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides
D9C14_16410	COG0505	Belongs to the CarA family
D9C14_16415	COG0458	carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity
D9C14_16420	COG0543	2 iron, 2 sulfur cluster binding
D9C14_16425	COG0167	dihydroorotate dehydrogenase activity
D9C14_16430	COG0284	orotidine-5'-phosphate decarboxylase activity
D9C14_16435	COG0461	Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)
D9C14_16440	COG0175	sulfate reduction
D9C14_16445	COG0306	phosphate transporter
D9C14_16450	COG2046	Belongs to the sulfate adenylyltransferase family
D9C14_16455	COG0529	Catalyzes the synthesis of activated sulfate
D9C14_16460	COG0007	Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme
D9C14_16465	COG2138	Cobalamin (vitamin B12) biosynthesis CbiX protein
D9C14_16470	COG1648	precorrin-2 dehydrogenase activity
D9C14_16480	COG0474	ATPase, P-type transporting, HAD superfamily, subfamily IC
D9C14_16485	COG1561	YicC-like family, N-terminal region
D9C14_16490	COG2052	Domain of unknown function (DUF370)
D9C14_16495	COG0194	GDP metabolic process
D9C14_16500	COG1758	RNA polymerase activity
D9C14_16505	COG0452	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
D9C14_16510	COG1198	Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
D9C14_16515	COG0242	peptide deformylase activity
D9C14_16520	COG0223	Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
D9C14_16525	COG0144	Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
D9C14_16525	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
D9C14_16530	COG0820	rRNA (adenine-C2-)-methyltransferase activity
D9C14_16535	COG0631	protein serine/threonine phosphatase activity
D9C14_16540	COG2815	serine threonine protein kinase
D9C14_16540	COG0515	serine threonine protein kinase
D9C14_16545	COG1162	GTPase activity
D9C14_16550	COG0036	Belongs to the ribulose-phosphate 3-epimerase family
D9C14_16555	COG1564	THIamine pyrophosphokinase
D9C14_16565	COG0227	Belongs to the bacterial ribosomal protein bL28 family
D9C14_16570	COG1302	Protein conserved in bacteria
D9C14_16575	COG1461	Dihydroxyacetone kinase
D9C14_16580	COG1760	l-serine dehydratase
D9C14_16585	COG1760	l-serine dehydratase
D9C14_16590	COG1200	Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
D9C14_16595	COG2050	protein possibly involved in aromatic compounds catabolism
D9C14_16595	COG1349	DNA-binding transcription factor activity
D9C14_16600	COG0416	fatty acid biosynthetic process
D9C14_16605	COG0331	[acyl-carrier-protein] S-malonyltransferase activity
D9C14_16610	COG1028	Short-chain dehydrogenase reductase Sdr
D9C14_16615	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
D9C14_16620	COG0571	ribonuclease III activity
D9C14_16625	COG1196	nuclear chromosome segregation
D9C14_16630	COG0552	protein localization to endoplasmic reticulum
D9C14_16640	COG2739	Might take part in the signal recognition particle (SRP) pathway. This is inferred from the conservation of its genetic proximity to ftsY ffh. May be a regulatory protein
D9C14_16645	COG0541	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
D9C14_16650	COG0228	four-way junction DNA binding
D9C14_16655	COG1837	Belongs to the UPF0109 family
D9C14_16665	COG0806	An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes
D9C14_16670	COG0336	Belongs to the RNA methyltransferase TrmD family
D9C14_16675	COG0335	large ribosomal subunit rRNA binding
D9C14_16680	COG1161	Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity
D9C14_16685	COG0164	Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
D9C14_16695	COG2257	FlhB HrpN YscU SpaS Family
D9C14_16700	COG0045	succinate-CoA ligase (ADP-forming) activity
D9C14_16705	COG0074	Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit
D9C14_16710	COG0758	DNA mediated transformation
D9C14_16715	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
D9C14_16720	COG1206	Catalyzes the folate-dependent formation of 5-methyl- uridine at position 54 (M-5-U54) in all tRNAs
D9C14_16725	COG4974	Belongs to the 'phage' integrase family
D9C14_16730	COG5405	Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery
D9C14_16735	COG1220	this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis
D9C14_16740	COG4465	DNA-binding protein that represses the expression of many genes that are induced as cells make the transition from rapid exponential growth to stationary phase. It is a GTP-binding protein that senses the intracellular GTP concentration as an indicator of nutritional limitations. At low GTP concentration it no longer binds GTP and stop to act as a transcriptional repressor
D9C14_16745	COG1815	bacterial-type flagellum-dependent cell motility
D9C14_16750	COG1558	bacterial-type flagellum-dependent cell motility
D9C14_16755	COG1677	Flagellar hook-basal body complex protein FliE
D9C14_16760	COG1766	The M ring may be actively involved in energy transduction
D9C14_16765	COG1536	FliG is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
D9C14_16770	COG1317	bacterial-type flagellum organization
D9C14_16775	COG1157	protein secretion by the type III secretion system
D9C14_16780	COG2882	bacterial-type flagellum organization
D9C14_16785	COG3334	PFAM MgtE intracellular
D9C14_16790	COG3144	bacterial-type flagellum assembly
D9C14_16795	COG1843	Required for flagellar hook formation. May act as a scaffolding protein
D9C14_16800	COG4786	Flagellar basal body rod
D9C14_16805	COG1582	Flagellar protein (FlbD)
D9C14_16810	COG1580	Controls the rotational direction of flagella during chemotaxis
D9C14_16815	COG1868	FliM is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
D9C14_16820	COG1886	FliN is one of three proteins (FliG, FliN, FliM) that form the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
D9C14_16820	COG1776	CheC inhibitor of MCP methylation
D9C14_16825	COG2201	protein-glutamate methylesterase activity
D9C14_16830	COG3190	flagellar
D9C14_16835	COG1338	Plays a role in the flagellum-specific transport system
D9C14_16840	COG1987	bacterial-type flagellum assembly
D9C14_16845	COG1684	flagellar biosynthetic protein fliR
D9C14_16850	COG1377	Required for formation of the rod structure in the basal body of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin
D9C14_16855	COG1298	Required for formation of the rod structure of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin
D9C14_16860	COG1419	protein localization to endoplasmic reticulum
D9C14_16865	COG0455	bacterial-type flagellum organization
D9C14_16870	COG2201	protein-glutamate methylesterase activity
D9C14_16875	COG2198	Histidine kinase
D9C14_16875	COG0643	Histidine kinase
D9C14_16880	COG0835	chemotaxis
D9C14_16885	COG1776	CheC inhibitor of MCP methylation
D9C14_16890	COG1871	Probably deamidates glutamine residues to glutamate on methyl-accepting chemotaxis receptors (MCPs), playing an important role in chemotaxis
D9C14_16895	COG1191	sigma factor activity
D9C14_16905	COG0052	Belongs to the universal ribosomal protein uS2 family
D9C14_16910	COG0264	Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome
D9C14_16915	COG0528	UMP kinase activity
D9C14_16920	COG0233	cytoplasmic translational termination
D9C14_16925	COG0020	Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
D9C14_16930	COG4589	Belongs to the CDS family
D9C14_16935	COG0743	1-deoxy-D-xylulose-5-phosphate reductoisomerase activity
D9C14_16940	COG0750	zinc metalloprotease
D9C14_16945	COG0442	prolyl-tRNA aminoacylation
D9C14_16950	COG2176	DNA-directed DNA polymerase activity
D9C14_16955	COG0779	Required for maturation of 30S ribosomal subunits
D9C14_16960	COG0195	Participates in both transcription termination and antitermination
D9C14_16965	COG2740	Nucleic-acid-binding protein implicated in transcription termination
D9C14_16970	COG1358	cellular component organization or biogenesis
D9C14_16975	COG0532	One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex
D9C14_16980	COG1550	Protein conserved in bacteria
D9C14_16985	COG0858	One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA
D9C14_16990	COG0130	Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs
D9C14_16995	COG0196	riboflavin kinase activity
D9C14_17000	COG0184	Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome
D9C14_17005	COG1185	polyribonucleotide nucleotidyltransferase activity
D9C14_17010	COG0726	polysaccharide deacetylase
D9C14_17015	COG0612	Peptidase, M16
D9C14_17020	COG1873	PFAM PRC-barrel domain
D9C14_17025	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
D9C14_17030	COG0452	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
D9C14_17035	COG0136	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
D9C14_17040	COG0527	aspartate kinase activity
D9C14_17045	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
D9C14_17050	COG0595	An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
D9C14_17055	COG0740	serine-type endopeptidase activity
D9C14_17065	COG1674	ftsk spoiiie
D9C14_17065	COG4980	gas vesicle protein
D9C14_17070	COG2188	Transcriptional regulator
D9C14_17075	COG2814	Major facilitator Superfamily
D9C14_17080	COG0612	Peptidase, M16
D9C14_17085	COG0612	Peptidase, M16
D9C14_17090	COG0300	oxidoreductase activity
D9C14_17105	COG1426	Protein conserved in bacteria
D9C14_17110	COG0558	Belongs to the CDP-alcohol phosphatidyltransferase class-I family
D9C14_17115	COG1546	Belongs to the CinA family
D9C14_17115	COG1058	Belongs to the CinA family
D9C14_17120	COG0468	Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage
D9C14_17125	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
D9C14_17130	COG1418	mRNA catabolic process
D9C14_17135	COG1692	metallophosphoesterase
D9C14_17140	COG2359	stage V sporulation protein S
D9C14_17145	COG1063	alcohol dehydrogenase
D9C14_17150	COG0156	8-amino-7-oxononanoate synthase activity
D9C14_17160	COG4550	Control of competence regulator ComK, YlbF/YmcA
D9C14_17170	COG0249	that it carries out the mismatch recognition step. This protein has a weak ATPase activity
D9C14_17175	COG0323	This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex
D9C14_17190	COG3226	Transcriptional regulator
D9C14_17195	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
D9C14_17205	COG0331	[acyl-carrier-protein] S-malonyltransferase activity
D9C14_17210	COG3321	synthase
D9C14_17215	COG2070	2-Nitropropane dioxygenase
D9C14_17215	COG0331	[acyl-carrier-protein] S-malonyltransferase activity
D9C14_17220	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
D9C14_17225	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
D9C14_17230	COG3425	synthase
D9C14_17235	COG1024	Enoyl-CoA hydratase
D9C14_17240	COG1024	Enoyl-CoA hydratase
D9C14_17245	COG1028	Short-chain dehydrogenase reductase Sdr
D9C14_17245	COG3321	synthase
D9C14_17245	COG0300	oxidoreductase activity
D9C14_17245	COG0318	PFAM AMP-dependent synthetase and ligase
D9C14_17245	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
D9C14_17250	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
D9C14_17250	COG0300	oxidoreductase activity
D9C14_17250	COG3321	synthase
D9C14_17250	COG4221	oxidoreductase activity
D9C14_17255	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
D9C14_17255	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
D9C14_17255	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
D9C14_17255	COG3321	synthase
D9C14_17255	COG1028	Short-chain dehydrogenase reductase Sdr
D9C14_17260	COG1028	Short-chain dehydrogenase reductase Sdr
D9C14_17260	COG4221	oxidoreductase activity
D9C14_17260	COG3321	synthase
D9C14_17260	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
D9C14_17265	COG3319	amino acid activation for nonribosomal peptide biosynthetic process
D9C14_17265	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
D9C14_17265	COG3321	synthase
D9C14_17265	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
D9C14_17270	COG2124	cytochrome p450
D9C14_17280	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
D9C14_17285	COG1404	Belongs to the peptidase S8 family
D9C14_17295	COG4195	phage-related replication protein
D9C14_17300	COG1764	response to oxidative stress
D9C14_17305	COG2076	Multidrug Resistance protein
D9C14_17310	COG2076	Multidrug Resistance protein
D9C14_17325	COG0324	Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A)
D9C14_17330	COG1923	regulation of RNA biosynthetic process
D9C14_17345	COG1780	Probably involved in ribonucleotide reductase function
D9C14_17350	COG0209	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
D9C14_17355	COG0208	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
D9C14_17360	COG4112	unkown
D9C14_17365	COG0860	N-Acetylmuramoyl-L-alanine amidase
D9C14_17375	COG0464	growth
D9C14_17390	COG1525	nuclease
D9C14_17400	COG4282	regulation of fungal-type cell wall biogenesis
D9C14_17405	COG5444	nuclease activity
D9C14_17435	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
D9C14_17440	COG2211	Major facilitator Superfamily
D9C14_17445	COG2226	methyltransferase
D9C14_17450	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
D9C14_17460	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
D9C14_17465	COG0457	Tetratricopeptide repeat
D9C14_17480	COG5632	N-Acetylmuramoyl-L-alanine amidase
D9C14_17480	COG3409	Peptidoglycan-binding domain 1 protein
D9C14_17495	COG2433	Pfam Transposase IS66
D9C14_17505	COG0741	lytic transglycosylase activity
D9C14_17505	COG0739	heme binding
D9C14_17505	COG1196	nuclear chromosome segregation
D9C14_17530	COG0582	viral genome integration into host DNA
D9C14_17630	COG4373	Mu-like prophage FluMu protein gp28
D9C14_17670	COG0776	regulation of translation
D9C14_17735	COG3655	Transcriptional regulator
D9C14_17815	COG3655	Transcriptional regulator
D9C14_17870	COG3646	Phage regulatory protein
D9C14_17870	COG3645	SOS response
D9C14_17935	COG1793	dna ligase
D9C14_17940	COG2135	peptidase activity
D9C14_17955	COG4195	phage-related replication protein
D9C14_17960	COG3420	alginic acid biosynthetic process
D9C14_17960	COG5434	Belongs to the glycosyl hydrolase 28 family
D9C14_18020	COG3584	3D domain protein
D9C14_18035	COG0125	Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
D9C14_18145	COG1780	Probably involved in ribonucleotide reductase function
D9C14_18150	COG0209	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
D9C14_18150	COG1372	Participates in initiation and elongation during chromosome replication
D9C14_18185	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
D9C14_18190	COG0756	dUTP diphosphatase activity
D9C14_18195	COG3449	Inhibits the supercoiling activity of DNA gyrase. Acts by inhibiting DNA gyrase at an early step, prior to (or at the step of) binding of DNA by the gyrase. It protects cells against toxins that target DNA gyrase, by inhibiting activity of these toxins and reducing the formation of lethal double-strand breaks in the cell
D9C14_18255	COG1409	Hydrolyzes cAMP to 5'-AMP. Plays an important regulatory role in modulating the intracellular concentration of cAMP, thereby influencing cAMP-dependent processes
D9C14_18305	COG3331	DNA recombination
D9C14_18320	COG2262	GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
D9C14_18325	COG4100	CystaTHIonine beta-lyase family protein involved in aluminum resistance
D9C14_18330	COG0789	Transcriptional regulator
D9C14_18335	COG0174	glutamine synthetase
D9C14_18375	COG1598	PFAM Uncharacterised protein family UPF0150
D9C14_18465	COG0463	Glycosyl transferase, family 2
D9C14_18485	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
D9C14_18500	COG3655	Transcriptional regulator
D9C14_18515	COG0135	phosphoribosylanthranilate isomerase activity
D9C14_18535	COG2211	Major facilitator Superfamily
D9C14_18540	COG3507	Belongs to the glycosyl hydrolase 43 family
D9C14_18545	COG1940	carbohydrate kinase activity
D9C14_18550	COG2115	Belongs to the xylose isomerase family
D9C14_18555	COG1070	Carbohydrate kinase
D9C14_18565	COG1525	nuclease
D9C14_18570	COG2814	Major facilitator Superfamily
D9C14_18575	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
D9C14_18585	COG0756	dUTP diphosphatase activity
D9C14_18620	COG1826	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
D9C14_18630	COG3832	glyoxalase III activity
D9C14_18675	COG4195	phage-related replication protein
D9C14_18685	COG0346	lactoylglutathione lyase activity
D9C14_18695	COG1974	Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
D9C14_18700	COG1388	LysM domain
D9C14_18705	COG1961	COG1961 Site-specific recombinases, DNA invertase Pin homologs
D9C14_18710	COG4224	UPF0291 protein
D9C14_18715	COG0021	Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate
D9C14_18725	COG3763	UPF0154 protein
D9C14_18735	COG0785	Cytochrome C biogenesis protein
D9C14_18740	COG2201	protein-glutamate methylesterase activity
D9C14_18745	COG4846	Membrane protein involved in cytochrome C biogenesis
D9C14_18755	COG0071	Belongs to the small heat shock protein (HSP20) family
D9C14_18770	COG1048	Catalyzes the isomerization of citrate to isocitrate via cis-aconitate
D9C14_18775	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
D9C14_18795	COG0824	Thioesterase
D9C14_18805	COG4841	protein insertion into membrane
D9C14_18810	COG0344	acyl-phosphate glycerol-3-phosphate acyltransferase activity
D9C14_18815	COG1832	CoA-binding protein
D9C14_18820	COG0187	DNA topoisomerase II activity
D9C14_18825	COG0188	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
D9C14_18835	COG1115	amino acid carrier protein
D9C14_18840	COG2730	Belongs to the glycosyl hydrolase 5 (cellulase A) family
D9C14_18850	COG5520	Belongs to the glycosyl hydrolase 30 family
D9C14_18855	COG3507	Belongs to the glycosyl hydrolase 43 family
D9C14_18865	COG2246	polysaccharide biosynthetic process
D9C14_18870	COG1210	Utp--glucose-1-phosphate uridylyltransferase
D9C14_18875	COG0586	Pfam SNARE associated Golgi protein
D9C14_18880	COG2404	hydrolase activity, acting on ester bonds
D9C14_18885	COG4799	Acetyl-CoA carboxylase, carboxyltransferase component subunits alpha and beta
D9C14_18890	COG1024	Enoyl-CoA hydratase
D9C14_18895	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
D9C14_18900	COG0511	ligase activity, forming carbon-carbon bonds
D9C14_18905	COG0439	Biotin carboxylase
D9C14_18910	COG0318	PFAM AMP-dependent synthetase and ligase
D9C14_18915	COG1960	acyl-CoA dehydrogenase activity
D9C14_18930	COG1649	PFAM Uncharacterised BCR, COG1649
D9C14_18940	COG3319	amino acid activation for nonribosomal peptide biosynthetic process
D9C14_18940	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
D9C14_18945	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
D9C14_18950	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
D9C14_18955	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
D9C14_18960	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
D9C14_18965	COG2027	D-alanyl-D-alanine carboxypeptidase
D9C14_18970	COG2017	converts alpha-aldose to the beta-anomer
D9C14_18975	COG0534	Mate efflux family protein
D9C14_18990	COG0582	viral genome integration into host DNA
D9C14_18995	COG0166	Belongs to the GPI family
D9C14_19000	COG0405	Gamma-glutamyltransferase
D9C14_19005	COG0583	DNA-binding transcription factor activity
D9C14_19010	COG0604	alcohol dehydrogenase
D9C14_19015	COG0493	'glutamate synthase
D9C14_19020	COG0070	glutamate synthase
D9C14_19020	COG0067	glutamate synthase
D9C14_19020	COG0069	glutamate synthase activity
D9C14_19025	COG0583	DNA-binding transcription factor activity
D9C14_19030	COG0263	Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate
D9C14_19035	COG0345	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
D9C14_19045	COG0300	oxidoreductase activity
D9C14_19050	COG4768	protein containing a divergent version of the methyl-accepting chemotaxis-like domain
D9C14_19060	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
D9C14_19075	COG2814	Major facilitator Superfamily
D9C14_19080	COG1070	Carbohydrate kinase
D9C14_19085	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
D9C14_19090	COG0243	molybdopterin cofactor binding
D9C14_19120	COG5278	phosphoserine phosphatase activity
D9C14_19120	COG0840	transmembrane signaling receptor activity
D9C14_19125	COG2368	4-hydroxyphenylacetate
D9C14_19130	COG4305	rare lipoprotein A
D9C14_19135	COG3619	membrane
D9C14_19140	COG3866	Pectate lyase
D9C14_19145	COG2135	peptidase activity
D9C14_19155	COG2140	Oxalate decarboxylase
D9C14_19165	COG0456	acetyltransferase
D9C14_19185	COG2720	vancomycin resistance protein
D9C14_19195	COG3655	Transcriptional regulator
D9C14_19200	COG3739	integral membrane protein
D9C14_19205	COG0583	DNA-binding transcription factor activity
D9C14_19210	COG0697	spore germination
D9C14_19220	COG0693	protein deglycase activity
D9C14_19225	COG2367	Beta-lactamase
D9C14_19250	COG0574	Belongs to the PEP-utilizing enzyme family
D9C14_19250	COG3848	Pyruvate phosphate dikinase
D9C14_19255	COG0726	polysaccharide deacetylase
D9C14_19265	COG2314	TM2 domain
D9C14_19270	COG1396	sequence-specific DNA binding
D9C14_19390	COG0457	Tetratricopeptide repeat
D9C14_19425	COG4282	regulation of fungal-type cell wall biogenesis
D9C14_19430	COG1231	oxidoreductase activity
D9C14_19435	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
D9C14_19440	COG0662	Cupin 2, conserved barrel domain protein
D9C14_19440	COG2207	Transcriptional regulator
D9C14_19445	COG0456	acetyltransferase
D9C14_19450	COG1309	transcriptional regulator
D9C14_19455	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
D9C14_19460	COG3708	Transcriptional regulator
D9C14_19465	COG2378	regulation of single-species biofilm formation
D9C14_19475	COG0640	Transcriptional regulator
D9C14_19480	COG0741	lytic transglycosylase activity
D9C14_19485	COG2322	membrane
D9C14_19500	COG1619	proteins homologs of microcin C7 resistance protein MccF
D9C14_19505	COG3239	Fatty acid desaturase
D9C14_19510	COG4585	Histidine kinase
D9C14_19515	COG2197	response regulator
D9C14_19525	COG1388	LysM domain
D9C14_19525	COG3584	3D domain protein
D9C14_19530	COG0514	ATP-dependent DNA helicase (RecQ)
D9C14_19545	COG1182	Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity
D9C14_19550	COG1734	Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters
D9C14_19565	COG0071	Belongs to the small heat shock protein (HSP20) family
D9C14_19590	COG1012	belongs to the aldehyde dehydrogenase family
D9C14_19595	COG1657	PFAM Prenyltransferase squalene oxidase
D9C14_19600	COG0605	Destroys radicals which are normally produced within the cells and which are toxic to biological systems
D9C14_19605	COG0733	neurotransmitter:sodium symporter activity
D9C14_19610	COG0385	Bile acid
D9C14_19615	COG0508	dehydrogenase complex catalyzes the overall conversion of
D9C14_19620	COG0567	Dehydrogenase, E1 component
D9C14_19625	COG4548	von Willebrand factor, type A
D9C14_19630	COG0714	Associated with various cellular activities
D9C14_19635	COG2032	superoxide dismutase activity
D9C14_19640	COG1388	LysM domain
D9C14_19640	COG0791	NLP P60 protein
D9C14_19645	COG1819	glycosyl
D9C14_19650	COG1624	Catalyzes the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria
D9C14_19655	COG0534	Mate efflux family protein
D9C14_19660	COG1366	Belongs to the anti-sigma-factor antagonist family
D9C14_19665	COG2120	A mycothiol (MSH, N-acetylcysteinyl-glucosaminyl- inositol) S-conjugate amidase, it recycles conjugated MSH to the N-acetyl cysteine conjugate (AcCys S-conjugate, a mercapturic acid) and the MSH precursor. Involved in MSH-dependent detoxification of a number of alkylating agents and antibiotics
D9C14_19670	COG2120	A mycothiol (MSH, N-acetylcysteinyl-glucosaminyl- inositol) S-conjugate amidase, it recycles conjugated MSH to the N-acetyl cysteine conjugate (AcCys S-conjugate, a mercapturic acid) and the MSH precursor. Involved in MSH-dependent detoxification of a number of alkylating agents and antibiotics
D9C14_19680	COG2962	Rard protein
D9C14_19695	COG2610	gluconate transmembrane transporter activity
D9C14_19700	COG1942	4-Oxalocrotonate Tautomerase
D9C14_19705	COG1733	regulation of RNA biosynthetic process
D9C14_19710	COG0778	Nitroreductase
D9C14_19715	COG0400	carboxylic ester hydrolase activity
D9C14_19720	COG0346	lactoylglutathione lyase activity
D9C14_19730	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
D9C14_19735	COG0793	Belongs to the peptidase S41A family
D9C14_19735	COG3409	Peptidoglycan-binding domain 1 protein
D9C14_19740	COG2226	methyltransferase
D9C14_19750	COG1876	peptidase activity
D9C14_19755	COG0813	purine-nucleoside phosphorylase activity
D9C14_19770	COG0671	phosphoesterase, PA-phosphatase related
D9C14_19795	COG4479	Belongs to the UPF0346 family
D9C14_19805	COG1509	lysine 2,3-aminomutase activity
D9C14_19810	COG0456	acetyltransferase
D9C14_19815	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
D9C14_19820	COG2057	Acyl CoA acetate 3-ketoacid CoA transferase beta subunit
D9C14_19825	COG1788	Acyl CoA acetate 3-ketoacid CoA transferase, alpha subunit
D9C14_19830	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
D9C14_19845	COG0456	acetyltransferase
D9C14_19850	COG0463	Glycosyl transferase, family 2
D9C14_19865	COG4641	Protein conserved in bacteria
D9C14_19870	COG4247	3-phytase (myo-inositol-hexaphosphate 3-phosphohydrolase)
D9C14_19875	COG1086	Polysaccharide biosynthesis protein
D9C14_19880	COG0229	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
D9C14_19885	COG0225	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
D9C14_19890	COG1846	Transcriptional regulator
D9C14_19895	COG0534	Mate efflux family protein
D9C14_19905	COG4698	Protein conserved in bacteria
D9C14_19910	COG2755	lipolytic protein G-D-S-L family
D9C14_19915	COG1999	signal sequence binding
D9C14_19925	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
D9C14_19930	COG1221	Transcriptional regulators containing an AAA-type ATPase domain and a DNA-binding domain
D9C14_19935	COG1272	protein, Hemolysin III
D9C14_19940	COG0204	Acyl-transferase
D9C14_19945	COG0262	Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis
D9C14_19950	COG0207	Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis
D9C14_19955	COG1267	Lipid phosphatase which dephosphorylates phosphatidylglycerophosphate (PGP) to phosphatidylglycerol (PG)
D9C14_19965	COG2521	methyltransferase
D9C14_19965	COG2136	Putative SAM-dependent methyltransferase
D9C14_19975	COG0129	dihydroxy-acid dehydratase activity
D9C14_19980	COG1413	lyase activity
D9C14_19985	COG1418	mRNA catabolic process
D9C14_19990	COG0386	Belongs to the glutathione peroxidase family
D9C14_19995	COG1897	L-methionine biosynthetic process from homoserine via O-succinyl-L-homoserine and cystathionine
D9C14_20000	COG0707	Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
D9C14_20010	COG1278	Cold shock
D9C14_20030	COG0328	RNA-DNA hybrid ribonuclease activity
D9C14_20035	COG1738	Involved in the import of queuosine (Q) precursors, required for Q precursor salvage
D9C14_20040	COG0328	RNA-DNA hybrid ribonuclease activity
D9C14_20050	COG0258	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
D9C14_20065	COG0699	ATPase. Has a role at an early stage in the morphogenesis of the spore coat
D9C14_20075	COG1755	Isoprenylcysteine carboxyl methyltransferase
D9C14_20080	COG3424	synthase
D9C14_20085	COG2233	PERMEase
D9C14_20090	COG0503	Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
D9C14_20095	COG2317	Broad specificity carboxypetidase that releases amino acids sequentially from the C-terminus, including neutral, aromatic, polar and basic residues
D9C14_20105	COG0800	Aldolase
D9C14_20110	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
D9C14_20115	COG1609	Transcriptional regulator
D9C14_20120	COG3717	Catalyzes the isomerization of 5-dehydro-4-deoxy-D- glucuronate to 3-deoxy-D-glycero-2,5-hexodiulosonate
D9C14_20125	COG1028	Short-chain dehydrogenase reductase Sdr
D9C14_20130	COG1199	ATP-dependent helicase activity
D9C14_20145	COG0116	Belongs to the methyltransferase superfamily
D9C14_20160	COG4474	Belongs to the UPF0398 family
D9C14_20175	COG3359	exonuclease
D9C14_20180	COG1111	helicase
D9C14_20180	COG1205	dead DEAH box helicase
D9C14_20185	COG2190	(PTS) system
D9C14_20190	COG0071	Belongs to the small heat shock protein (HSP20) family
D9C14_20225	COG3331	DNA recombination
D9C14_20230	COG4499	WXG100 protein secretion system (Wss), protein YukC
D9C14_20230	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
D9C14_20240	COG0177	DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
D9C14_20245	COG3935	DnaD domain protein
D9C14_20250	COG0017	Asparaginyl-tRNA synthetase
D9C14_20255	COG0436	Aminotransferase
D9C14_20260	COG5353	protein conserved in bacteria
D9C14_20270	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
D9C14_20270	COG1199	ATP-dependent helicase activity
D9C14_20275	COG0853	Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine
D9C14_20280	COG0414	Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate
D9C14_20285	COG0413	3-methyl-2-oxobutanoate hydroxymethyltransferase activity
D9C14_20290	COG1654	Acts both as a biotin-- acetyl-CoA-carboxylase ligase and a biotin-operon repressor. In the presence of ATP, BirA activates biotin to form the BirA-biotinyl-5'-adenylate (BirA-bio- 5'-AMP or holoBirA) complex. HoloBirA can either transfer the biotinyl moiety to the biotin carboxyl carrier protein (BCCP) subunit of acetyl-CoA carboxylase, or bind to the biotin operator site and inhibit transcription of the operon
D9C14_20290	COG0340	biotin-[acetyl-CoA-carboxylase] ligase activity
D9C14_20295	COG0617	tRNA 3'-terminal CCA addition
D9C14_20300	COG0438	transferase activity, transferring glycosyl groups
D9C14_20305	COG2120	A mycothiol (MSH, N-acetylcysteinyl-glucosaminyl- inositol) S-conjugate amidase, it recycles conjugated MSH to the N-acetyl cysteine conjugate (AcCys S-conjugate, a mercapturic acid) and the MSH precursor. Involved in MSH-dependent detoxification of a number of alkylating agents and antibiotics
D9C14_20310	COG1803	Methylglyoxal synthase
D9C14_20315	COG0289	4-hydroxy-tetrahydrodipicolinate reductase
D9C14_20320	COG1694	Mazg nucleotide pyrophosphohydrolase
D9C14_20325	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
D9C14_20335	COG4347	Protein of unknown function (DUF1405)
D9C14_20340	COG2010	Cytochrome c
D9C14_20340	COG1290	Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis
D9C14_20345	COG1290	Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis
D9C14_20350	COG0723	plastoquinol--plastocyanin reductase activity
D9C14_20360	COG5582	Belongs to the UPF0302 family
D9C14_20365	COG0457	Tetratricopeptide repeat
D9C14_20370	COG0128	3-phosphoshikimate 1-carboxyvinyltransferase activity
D9C14_20375	COG0287	Prephenate dehydrogenase
D9C14_20380	COG0079	Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
D9C14_20390	COG0133	tryptophan synthase activity
D9C14_20395	COG0135	phosphoribosylanthranilate isomerase activity
D9C14_20405	COG0547	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
D9C14_20410	COG0147	Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
D9C14_20415	COG4401	Chorismate mutase type I
D9C14_20420	COG0337	Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ)
D9C14_20425	COG0082	Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system
D9C14_20430	COG1352	Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP
D9C14_20435	COG0105	UTP biosynthetic process
D9C14_20440	COG0142	geranyltranstransferase activity
D9C14_20445	COG2226	methyltransferase
D9C14_20450	COG0142	geranyltranstransferase activity
D9C14_20460	COG0302	gtp cyclohydrolase
D9C14_20465	COG0776	regulation of translation
D9C14_20470	COG0699	ATPase. Has a role at an early stage in the morphogenesis of the spore coat
D9C14_20485	COG0240	glycerol-3-phosphate dehydrogenase [NAD(P)+] activity
D9C14_20490	COG1160	GTP binding
D9C14_20515	COG1304	FMN binding
D9C14_20520	COG0539	negative regulation of cytoplasmic translation
D9C14_20525	COG0283	belongs to the cytidylate kinase family. Type 1 subfamily
D9C14_20535	COG5581	Acts as a flagellar brake, regulating swimming and swarming in a bis-(3'-5') cyclic diguanylic acid (c-di-GMP)- dependent manner. Binds 1 c-di-GMP dimer per subunit. Increasing levels of c-di-GMP lead to decreased motility
D9C14_20540	COG2959	enzyme of heme biosynthesis
D9C14_20545	COG3773	Cell wall hydrolase
D9C14_20545	COG3409	Peptidoglycan-binding domain 1 protein
D9C14_20550	COG2339	peptidase activity
D9C14_20555	COG0492	ferredoxin-NADP+ reductase activity
D9C14_20560	COG0334	Belongs to the Glu Leu Phe Val dehydrogenases family
D9C14_20565	COG4862	establishment of competence for transformation
D9C14_20570	COG1408	metallophosphoesterase
D9C14_20580	COG1388	LysM domain
D9C14_20585	COG1266	CAAX protease self-immunity
D9C14_20590	COG0514	ATP-dependent DNA helicase (RecQ)
D9C14_20595	COG4955	Helix-turn-helix domain
D9C14_20600	COG1141	Ferredoxin
D9C14_20605	COG3601	Mediates riboflavin uptake, may also transport FMN and roseoflavin. Probably a riboflavin-binding protein that interacts with the energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates. The substrates themselves are bound by transmembrane, not extracytoplasmic soluble proteins
D9C14_20610	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
D9C14_20615	COG0710	3-dehydroquinate dehydratase activity
D9C14_20625	COG1595	DNA-templated transcription, initiation
D9C14_20630	COG5002	protein histidine kinase activity
D9C14_20635	COG0745	RESPONSE REGULATOR receiver
D9C14_20640	COG0755	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
D9C14_20645	COG1333	cytochrome c biogenesis protein
D9C14_20650	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
D9C14_20655	COG1187	pseudouridine synthase activity
D9C14_20660	COG0700	Nucleoside recognition
D9C14_20665	COG2715	membrane protein required for spore maturation
D9C14_20670	COG1686	Belongs to the peptidase S11 family
D9C14_20680	COG1386	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves
D9C14_20685	COG1354	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves
D9C14_20690	COG1547	Domain of unknown function (DUF309)
D9C14_20695	COG0456	acetyltransferase
D9C14_20700	COG0054	6,7-dimethyl-8-ribityllumazine synthase activity
D9C14_20705	COG0807	Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
D9C14_20705	COG0108	Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
D9C14_20710	COG0307	riboflavin synthase, alpha
D9C14_20715	COG0117	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
D9C14_20715	COG1985	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
D9C14_20725	COG0681	Belongs to the peptidase S26 family
D9C14_20735	COG3478	Nucleic-acid-binding protein containing Zn-ribbon domain (DUF2082)
D9C14_20755	COG0652	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
D9C14_20765	COG4086	secreted protein
D9C14_20770	COG0019	diaminopimelate decarboxylase activity
D9C14_20775	COG0697	spore germination
D9C14_20790	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
D9C14_20810	COG1191	sigma factor activity
D9C14_20815	COG2172	sigma factor antagonist activity
D9C14_20820	COG1366	Belongs to the anti-sigma-factor antagonist family
D9C14_20825	COG1686	Belongs to the peptidase S11 family
D9C14_20830	COG0005	The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate
D9C14_20835	COG1015	Phosphotransfer between the C1 and C5 carbon atoms of pentose
D9C14_20840	COG4974	Belongs to the 'phage' integrase family
D9C14_20850	COG0735	belongs to the Fur family
D9C14_20855	COG1300	Membrane
D9C14_20865	COG0281	malic enzyme
D9C14_20870	COG1757	Na H antiporter
D9C14_20875	COG1027	Aspartate ammonia-lyase
D9C14_20880	COG0252	asparaginase activity
D9C14_20885	COG1396	sequence-specific DNA binding
D9C14_20890	COG1379	DNA repair
D9C14_20895	COG0494	nUDIX hydrolase
D9C14_20905	COG0667	Aldo Keto reductase
D9C14_20915	COG1073	alpha beta
D9C14_20925	COG4918	Iron-sulphur cluster biosynthesis
D9C14_20930	COG0456	acetyltransferase
D9C14_20930	COG2320	Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A
D9C14_20935	COG2329	Antibiotic biosynthesis monooxygenase
D9C14_20940	COG0456	acetyltransferase
D9C14_20950	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
D9C14_20960	COG2211	Major facilitator Superfamily
D9C14_20965	COG0346	lactoylglutathione lyase activity
D9C14_20970	COG1072	(Pantothenic acid kinase))
D9C14_20975	COG3048	D-serine ammonia-lyase activity
D9C14_20980	COG0300	oxidoreductase activity
D9C14_20985	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
D9C14_20990	COG0345	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
D9C14_20995	COG4187	Peptidase family M20/M25/M40
D9C14_21000	COG1902	pentaerythritol trinitrate reductase activity
D9C14_21005	COG0596	Alpha beta hydrolase
D9C14_21015	COG1234	tRNA 3'-trailer cleavage
D9C14_21020	COG0364	Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
D9C14_21025	COG0362	Catalyzes the oxidative decarboxylation of 6- phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH
D9C14_21030	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
D9C14_21040	COG0706	membrane insertase activity
D9C14_21045	COG3361	conserved protein (COG2071)
D9C14_21050	COG2195	Cleaves the N-terminal amino acid of tripeptides
D9C14_21055	COG4799	Acetyl-CoA carboxylase, carboxyltransferase component subunits alpha and beta
D9C14_21060	COG0346	lactoylglutathione lyase activity
D9C14_21065	COG1376	ErfK ybiS ycfS ynhG family protein
D9C14_21070	COG4129	membrane
D9C14_21075	COG1126	abc transporter atp-binding protein
D9C14_21080	COG0765	amino acid transport
D9C14_21085	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
D9C14_21095	COG1597	lipid kinase activity
D9C14_21100	COG2814	Major facilitator Superfamily
D9C14_21105	COG0789	Transcriptional regulator
D9C14_21105	COG4978	Transcriptional regulator
D9C14_21110	COG0508	dehydrogenase complex catalyzes the overall conversion of
D9C14_21115	COG0022	dehydrogenase e1 component
D9C14_21120	COG1071	oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor
D9C14_21125	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
D9C14_21130	COG3426	butyrate kinase activity
D9C14_21135	COG0334	Belongs to the Glu Leu Phe Val dehydrogenases family
D9C14_21140	COG0280	phosphate acetyltransferase
D9C14_21145	COG3290	protein histidine kinase activity
D9C14_21145	COG3829	transcription factor binding
D9C14_21155	COG2513	Catalyzes the thermodynamically favored C-C bond cleavage of (2R,3S)-2-methylisocitrate to yield pyruvate and succinate
D9C14_21160	COG2079	MmgE PrpD family protein
D9C14_21165	COG0372	Belongs to the citrate synthase family
D9C14_21170	COG1960	acyl-CoA dehydrogenase activity
D9C14_21175	COG1250	3-hydroxyacyl-CoA dehydrogenase
D9C14_21180	COG0183	Belongs to the thiolase family
D9C14_21185	COG0584	glycerophosphoryl diester phosphodiesterase
D9C14_21190	COG0860	N-Acetylmuramoyl-L-alanine amidase
D9C14_21205	COG1902	pentaerythritol trinitrate reductase activity
D9C14_21210	COG0745	RESPONSE REGULATOR receiver
D9C14_21215	COG0750	zinc metalloprotease
D9C14_21220	COG0497	DNA recombination
D9C14_21225	COG1438	arginine binding
D9C14_21230	COG1189	Ribosomal RNA methyltransferase RrmJ FtsJ
D9C14_21235	COG1154	Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP)
D9C14_21240	COG0142	geranyltranstransferase activity
D9C14_21245	COG1722	exodeoxyribonuclease VII activity
D9C14_21250	COG1570	exodeoxyribonuclease VII activity
D9C14_21255	COG0190	Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate
D9C14_21260	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
D9C14_21265	COG1302	Protein conserved in bacteria
D9C14_21270	COG0439	Biotin carboxylase
D9C14_21275	COG0511	ligase activity, forming carbon-carbon bonds
D9C14_21315	COG3854	ATPases associated with a variety of cellular activities
D9C14_21325	COG0231	Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
D9C14_21330	COG0006	proline dipeptidase activity
D9C14_21335	COG0757	Catalyzes a trans-dehydration via an enolate intermediate
D9C14_21345	COG3872	metal-dependent enzyme
D9C14_21355	COG1752	Esterase of the alpha-beta hydrolase superfamily
D9C14_21360	COG1321	iron dependent repressor
D9C14_21365	COG0095	Lipoate-protein ligase
D9C14_21370	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
D9C14_21375	COG1003	The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor
D9C14_21380	COG0403	The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor
D9C14_21385	COG0404	The glycine cleavage system catalyzes the degradation of glycine
D9C14_21390	COG0553	Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair
D9C14_21405	COG1396	sequence-specific DNA binding
D9C14_21415	COG0681	Belongs to the peptidase S26 family
D9C14_21440	COG4940	Competence protein ComGF
D9C14_21450	COG4970	Tfp pilus assembly protein FimT
D9C14_21455	COG4537	Required for transformation and DNA binding
D9C14_21460	COG1459	type II secretion system
D9C14_21465	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
D9C14_21470	COG0517	IMP dehydrogenase activity
D9C14_21475	COG0598	Magnesium transport protein CorA
D9C14_21480	COG1253	flavin adenine dinucleotide binding
D9C14_21485	COG1366	Belongs to the anti-sigma-factor antagonist family
D9C14_21495	COG1393	Belongs to the ArsC family
D9C14_21505	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
D9C14_21515	COG0011	TIGRFAM Protein of
D9C14_21525	COG2866	Carboxypeptidase
D9C14_21530	COG1368	sulfuric ester hydrolase activity
D9C14_21535	COG1940	carbohydrate kinase activity
D9C14_21540	COG4483	Protein conserved in bacteria
D9C14_21545	COG0457	Tetratricopeptide repeat
D9C14_21545	COG0705	Rhomboid family
D9C14_21555	COG0212	Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
D9C14_21560	COG0267	Belongs to the bacterial ribosomal protein bL33 family
D9C14_21565	COG0438	transferase activity, transferring glycosyl groups
D9C14_21580	COG1559	Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
D9C14_21585	COG1117	ATPase-coupled phosphate ion transmembrane transporter activity
D9C14_21590	COG1117	ATPase-coupled phosphate ion transmembrane transporter activity
D9C14_21595	COG0581	inorganic phosphate transmembrane transporter activity
D9C14_21600	COG0573	inorganic phosphate transmembrane transporter activity
D9C14_21605	COG0226	Part of the ABC transporter complex PstSACB involved in phosphate import
D9C14_21615	COG0477	Major facilitator Superfamily
D9C14_21620	COG0605	Destroys radicals which are normally produced within the cells and which are toxic to biological systems
D9C14_21625	COG2839	Protein conserved in bacteria
D9C14_21630	COG5521	maltodextrose utilization protein MalA
D9C14_21635	COG1388	LysM domain
D9C14_21640	COG0821	Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate
D9C14_21645	COG4709	membrane
D9C14_21650	COG5663	Belongs to the 5'(3')-deoxyribonucleotidase family
D9C14_21655	COG0735	belongs to the Fur family
D9C14_21660	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
D9C14_21670	COG0648	Endonuclease IV plays a role in DNA repair. It cleaves phosphodiester bonds at apurinic or apyrimidinic sites (AP sites) to produce new 5'-ends that are base-free deoxyribose 5-phosphate residues. It preferentially attacks modified AP sites created by bleomycin and neocarzinostatin
D9C14_21675	COG0513	Belongs to the DEAD box helicase family
D9C14_21685	COG0761	Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)- butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP MEP pathway for isoprenoid precursor biosynthesis
D9C14_21690	COG0327	Belongs to the GTP cyclohydrolase I type 2 NIF3 family
D9C14_21695	COG2384	SAM-dependent methyltransferase
D9C14_21700	COG2010	Cytochrome c
D9C14_21710	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
D9C14_21715	COG0358	DNA primase activity
D9C14_21720	COG1671	Belongs to the UPF0178 family
D9C14_21725	COG1806	Bifunctional serine threonine kinase and phosphorylase involved in the regulation of the
D9C14_21730	COG0517	IMP dehydrogenase activity
D9C14_21735	COG0751	glycine-tRNA ligase activity
D9C14_21740	COG0752	glycyl-tRNA synthetase alpha subunit
D9C14_21745	COG1381	Involved in DNA repair and RecF pathway recombination
D9C14_21755	COG1159	An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism
D9C14_21760	COG0295	cytidine deaminase activity
D9C14_21765	COG0818	Recycling of diacylglycerol produced during the turnover of membrane phospholipid
D9C14_21770	COG0319	Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA
D9C14_21775	COG1480	7TM receptor with intracellular HD hydrolase
D9C14_21780	COG1702	phosphate starvation-inducible protein PhoH
D9C14_21785	COG0561	phosphatase activity
D9C14_21800	COG4864	UPF0365 protein
D9C14_21805	COG1030	water channel activity
D9C14_21810	COG1610	YqeY-like protein
D9C14_21815	COG0828	Belongs to the bacterial ribosomal protein bS21 family
D9C14_21820	COG1283	sodium-dependent phosphate transmembrane transporter activity
D9C14_21825	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
D9C14_21830	COG1385	rRNA (uridine-N3-)-methyltransferase activity
D9C14_21835	COG2264	protein methyltransferase activity
D9C14_21840	COG0484	heat shock protein binding
D9C14_21845	COG0443	Heat shock 70 kDa protein
D9C14_21850	COG0576	Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ
D9C14_21855	COG1420	regulation of RNA biosynthetic process
D9C14_21860	COG0635	Involved in the biosynthesis of porphyrin-containing compound
D9C14_21865	COG0481	GTPase activity
D9C14_21875	COG0860	N-Acetylmuramoyl-L-alanine amidase
D9C14_21880	COG0680	Initiates the rapid degradation of small, acid-soluble proteins during spore germination
D9C14_21885	COG0268	Binds directly to 16S ribosomal RNA
D9C14_21890	COG1466	dna polymerase III delta subunit
D9C14_21905	COG2333	competence protein COMEC
D9C14_21905	COG0658	competence protein
D9C14_21910	COG2131	deaminase
D9C14_21915	COG1555	photosystem II stabilization
D9C14_21915	COG1596	polysaccharide export
D9C14_21920	COG0345	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
D9C14_21925	COG2226	methyltransferase
D9C14_21930	COG0799	negative regulation of ribosome biogenesis
D9C14_21935	COG1713	HD superfamily hydrolase involved in NAD metabolism
D9C14_21940	COG1057	Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD)
D9C14_21945	COG1534	Rna-binding protein
D9C14_21950	COG0169	Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA)
D9C14_21955	COG1161	Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity
D9C14_21960	COG2179	HAD superfamily (subfamily IIIA) phosphatase, TIGR01668
D9C14_21970	COG2755	lipolytic protein G-D-S-L family
D9C14_21975	COG5632	N-Acetylmuramoyl-L-alanine amidase
D9C14_21975	COG3409	Peptidoglycan-binding domain 1 protein
D9C14_21980	COG0398	Pfam SNARE associated Golgi protein
D9C14_21995	COG3209	COG3209 Rhs family protein
D9C14_22020	COG3223	Belongs to the PsiE family
D9C14_22025	COG0642	Histidine kinase
D9C14_22025	COG5002	protein histidine kinase activity
D9C14_22030	COG0745	RESPONSE REGULATOR receiver
D9C14_22035	COG2311	Membrane
D9C14_22045	COG0454	-acetyltransferase
D9C14_22050	COG2249	NAD(P)H dehydrogenase (quinone) activity
D9C14_22060	COG0730	response to heat
D9C14_22065	COG0425	Belongs to the sulfur carrier protein TusA family
D9C14_22070	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
D9C14_22070	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
D9C14_22080	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
D9C14_22080	COG0425	Belongs to the sulfur carrier protein TusA family
D9C14_22090	COG2210	Belongs to the sulfur carrier protein TusA family
D9C14_22095	COG1937	Protein conserved in bacteria
D9C14_22110	COG0662	Cupin 2, conserved barrel domain protein
D9C14_22130	COG0789	Transcriptional regulator
D9C14_22130	COG4978	Transcriptional regulator
D9C14_22135	COG2814	Major facilitator Superfamily
D9C14_22140	COG0456	acetyltransferase
D9C14_22145	COG1253	flavin adenine dinucleotide binding
D9C14_22155	COG0697	spore germination
D9C14_22160	COG0583	DNA-binding transcription factor activity
D9C14_22165	COG2072	flavoprotein involved in K transport