BSUB_00001 SM00382 ATPases associated with a variety of cellular activities BSUB_00001 SM00760 Bacterial dnaA protein helix-turn-helix domain BSUB_00002 SM00480 DNA polymerase III beta subunit BSUB_00006 SM00387 Histidine kinase-like ATPases BSUB_00006 SM00433 TopoisomeraseII BSUB_00007 SM00434 DNA Topoisomerase IV BSUB_00014 SM00116 Domain in cystathionine beta-synthase and other proteins. BSUB_00014 SM01240 BSUB_00014 BSUB_00015 SM00936 Penicillin-binding protein 5, C-terminal domain BSUB_00022 SM00257 Lysin motif BSUB_00022 SM00636 BSUB_00022 BSUB_00025 SM00382 ATPases associated with a variety of cellular activities BSUB_00027 SM00493 BSUB_00027 BSUB_00046 SM00465 GIY-YIG type nucleases (URI domain) BSUB_00048 SM00966 SpoVT / AbrB like domain BSUB_00051 SM01208 BSUB_00051 BSUB_00052 SM00493 BSUB_00052 BSUB_00053 SM00650 Ribosomal RNA adenine dimethylases BSUB_00062 SM01400 BSUB_00062 BSUB_00066 SM00487 DEAD-like helicases superfamily BSUB_00066 SM00490 helicase superfamily c-terminal domain BSUB_00066 SM00982 BSUB_00066 BSUB_00066 SM01058 CarD-like/TRCF domain BSUB_00067 SM00966 SpoVT / AbrB like domain BSUB_00070 SM00363 S4 RNA-binding domain BSUB_00074 SM00316 Ribosomal protein S1-like RNA-binding domain BSUB_00077 SM00331 Sigma factor PP2C-like phosphatases BSUB_00077 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain BSUB_00079 SM00220 Serine/Threonine protein kinases, catalytic domain BSUB_00080 SM00977 TilS substrate C-terminal domain BSUB_00082 SM00382 ATPases associated with a variety of cellular activities BSUB_00091 SM00905 Dihydroneopterin aldolase BSUB_00093 SM00530 Helix-turn-helix XRE-family like proteins BSUB_00114 SM00382 ATPases associated with a variety of cellular activities BSUB_00114 SM01086 C-terminal, D2-small domain, of ClpB protein BSUB_00115 SM00382 ATPases associated with a variety of cellular activities BSUB_00117 SM00670 Large family of predicted nucleotide-binding domains BSUB_00122 SM00840 BSUB_00122 BSUB_00123 SM00535 Ribonuclease III family BSUB_00124 SM00967 RNA 2'-O ribose methyltransferase substrate binding BSUB_00129 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. BSUB_00129 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. BSUB_00130 SM00649 Ribosomal protein L11/L12 BSUB_00136 SM00663 RNA polymerase I subunit A N-terminus BSUB_00140 SM00838 Elongation factor G C-terminus BSUB_00140 SM00889 Elongation factor G, domain IV BSUB_00143 SM01403 BSUB_00143 BSUB_00147 SM01382 BSUB_00147 BSUB_00147 SM01383 BSUB_00147 BSUB_00150 SM00322 K homology RNA-binding domain BSUB_00154 SM01374 BSUB_00154 BSUB_00155 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. BSUB_00168 SM00316 Ribosomal protein S1-like RNA-binding domain BSUB_00172 SM00662 RNA polymerases D BSUB_00174 SM00382 ATPases associated with a variety of cellular activities BSUB_00175 SM00382 ATPases associated with a variety of cellular activities BSUB_00182 SM00646 BSUB_00182 BSUB_00185 SM01251 BSUB_00185 BSUB_00208 SM00342 helix_turn_helix, arabinose operon control protein BSUB_00229 SM00478 endonuclease III BSUB_00230 SM00342 helix_turn_helix, arabinose operon control protein BSUB_00237 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor BSUB_00241 SM00729 Elongator protein 3, MiaB family, Radical SAM BSUB_00243 SM00382 ATPases associated with a variety of cellular activities BSUB_00248 SM00448 cheY-homologous receiver domain BSUB_00248 SM00862 Transcriptional regulatory protein, C terminal BSUB_00249 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BSUB_00249 SM00388 His Kinase A (phosphoacceptor) domain BSUB_00264 SM00347 helix_turn_helix multiple antibiotic resistance protein BSUB_00270 SM00342 helix_turn_helix, arabinose operon control protein BSUB_00280 SM00342 helix_turn_helix, arabinose operon control protein BSUB_00281 SM00450 Rhodanese Homology Domain BSUB_00285 SM00345 helix_turn_helix gluconate operon transcriptional repressor BSUB_00285 SM00866 BSUB_00285 BSUB_00292 SM00387 Histidine kinase-like ATPases BSUB_00293 SM00448 cheY-homologous receiver domain BSUB_00294 SM01130 BSUB_00294 BSUB_00297 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain BSUB_00298 SM00345 helix_turn_helix gluconate operon transcriptional repressor BSUB_00298 SM00895 BSUB_00298 BSUB_00299 SM00858 BSUB_00299 BSUB_00303 SM00448 cheY-homologous receiver domain BSUB_00303 SM00862 Transcriptional regulatory protein, C terminal BSUB_00304 SM00387 Histidine kinase-like ATPases BSUB_00304 SM00388 His Kinase A (phosphoacceptor) domain BSUB_00305 SM00382 ATPases associated with a variety of cellular activities BSUB_00309 SM00327 von Willebrand factor (vWF) type A domain BSUB_00318 SM00870 BSUB_00318 BSUB_00322 SM00387 Histidine kinase-like ATPases BSUB_00323 SM00448 cheY-homologous receiver domain BSUB_00323 SM00850 LytTr DNA-binding domain BSUB_00324 SM00382 ATPases associated with a variety of cellular activities BSUB_00331 SM00028 Tetratricopeptide repeats BSUB_00333 SM00642 Alpha-amylase domain BSUB_00335 SM00382 ATPases associated with a variety of cellular activities BSUB_00346 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor BSUB_00347 SM00116 Domain in cystathionine beta-synthase and other proteins. BSUB_00347 SM00382 ATPases associated with a variety of cellular activities BSUB_00353 SM00632 BSUB_00353 BSUB_00353 SM00642 Alpha-amylase domain BSUB_00357 SM00347 helix_turn_helix multiple antibiotic resistance protein BSUB_00380 SM00926 Molybdopterin oxidoreductase Fe4S4 domain BSUB_00386 SM00833 Cobalamin synthesis protein cobW C-terminal domain BSUB_00388 SM00062 Bacterial periplasmic substrate-binding proteins BSUB_00394 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BSUB_00394 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BSUB_00396 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family BSUB_00398 SM00823 Phosphopantetheine attachment site BSUB_00398 SM01294 BSUB_00398 BSUB_00399 SM00823 Phosphopantetheine attachment site BSUB_00399 SM01294 BSUB_00399 BSUB_00400 SM00823 Phosphopantetheine attachment site BSUB_00405 SM00345 helix_turn_helix gluconate operon transcriptional repressor BSUB_00408 SM00382 ATPases associated with a variety of cellular activities BSUB_00410 SM00062 Bacterial periplasmic substrate-binding proteins BSUB_00418 SM00710 Parallel beta-helix repeats BSUB_00418 SM00722 Domain present in carbohydrate binding proteins and sugar hydrolses BSUB_00423 SM00382 ATPases associated with a variety of cellular activities BSUB_00425 SM00448 cheY-homologous receiver domain BSUB_00425 SM00862 Transcriptional regulatory protein, C terminal BSUB_00426 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BSUB_00426 SM00387 Histidine kinase-like ATPases BSUB_00426 SM00388 His Kinase A (phosphoacceptor) domain BSUB_00427 SM00028 Tetratricopeptide repeats BSUB_00433 SM00382 ATPases associated with a variety of cellular activities BSUB_00439 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor BSUB_00440 SM00345 helix_turn_helix gluconate operon transcriptional repressor BSUB_00447 SM00420 helix_turn_helix, Deoxyribose operon repressor BSUB_00452 SM01329 BSUB_00452 BSUB_00461 SM00796 Allophanate hydrolase subunit 1 BSUB_00462 SM00797 Allophanate hydrolase subunit 2 BSUB_00463 SM00346 helix_turn_helix isocitrate lyase regulation BSUB_00487 SM00091 PAS domain BSUB_00487 SM00387 Histidine kinase-like ATPases BSUB_00488 SM00448 cheY-homologous receiver domain BSUB_00491 SM00382 ATPases associated with a variety of cellular activities BSUB_00501 SM00487 DEAD-like helicases superfamily BSUB_00501 SM00490 helicase superfamily c-terminal domain BSUB_00507 SM01005 Alanine racemase, C-terminal domain BSUB_00512 SM00387 Histidine kinase-like ATPases BSUB_00513 SM00331 Sigma factor PP2C-like phosphatases BSUB_00517 SM00331 Sigma factor PP2C-like phosphatases BSUB_00517 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain BSUB_00520 SM00347 helix_turn_helix multiple antibiotic resistance protein BSUB_00521 SM00316 Ribosomal protein S1-like RNA-binding domain BSUB_00521 SM00732 Likely ribonuclease with RNase H fold. BSUB_00522 SM00731 SprT homologues. BSUB_00532 SM00530 Helix-turn-helix XRE-family like proteins BSUB_00551 SM00255 Toll - interleukin 1 - resistance BSUB_00552 SM00028 Tetratricopeptide repeats BSUB_00556 SM00344 helix_turn_helix ASNC type BSUB_00557 SM00344 helix_turn_helix ASNC type BSUB_00566 SM00357 Cold shock protein domain BSUB_00567 SM01058 CarD-like/TRCF domain BSUB_00569 SM00342 helix_turn_helix, arabinose operon control protein BSUB_00571 SM00342 helix_turn_helix, arabinose operon control protein BSUB_00571 SM00871 Bacterial transcription activator, effector binding domain BSUB_00572 SM00345 helix_turn_helix gluconate operon transcriptional repressor BSUB_00578 SM00345 helix_turn_helix gluconate operon transcriptional repressor BSUB_00588 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor BSUB_00592 SM00345 helix_turn_helix gluconate operon transcriptional repressor BSUB_00594 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor BSUB_00597 SM00387 Histidine kinase-like ATPases BSUB_00598 SM00421 helix_turn_helix, Lux Regulon BSUB_00598 SM00448 cheY-homologous receiver domain BSUB_00602 SM00422 helix_turn_helix, mercury resistance BSUB_00602 SM00871 Bacterial transcription activator, effector binding domain BSUB_00619 SM00382 ATPases associated with a variety of cellular activities BSUB_00622 SM00347 helix_turn_helix multiple antibiotic resistance protein BSUB_00625 SM00347 helix_turn_helix multiple antibiotic resistance protein BSUB_00625 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor BSUB_00628 SM00345 helix_turn_helix gluconate operon transcriptional repressor BSUB_00628 SM00895 BSUB_00628 BSUB_00629 SM00257 Lysin motif BSUB_00629 SM00636 BSUB_00629 BSUB_00632 SM00098 Alkaline phosphatase homologues BSUB_00636 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BSUB_00643 SM00345 helix_turn_helix gluconate operon transcriptional repressor BSUB_00643 SM00866 BSUB_00643 BSUB_00661 SM00382 ATPases associated with a variety of cellular activities BSUB_00663 SM00881 CoA binding domain BSUB_00668 SM00883 Chaperonin 10 Kd subunit BSUB_00681 SM00028 Tetratricopeptide repeats BSUB_00681 SM00382 ATPases associated with a variety of cellular activities BSUB_00682 SM00829 Enoylreductase BSUB_00691 SM00829 Enoylreductase BSUB_00704 SM00460 Transglutaminase/protease-like homologues BSUB_00711 SM01001 AIR carboxylase BSUB_00713 SM00998 Adenylosuccinate lyase C-terminus BSUB_00716 SM01211 BSUB_00716 BSUB_00721 SM00798 AICARFT/IMPCHase bienzyme BSUB_00721 SM00851 MGS-like domain BSUB_00722 SM01209 BSUB_00722 BSUB_00722 SM01210 BSUB_00722 BSUB_00723 SM00344 helix_turn_helix ASNC type BSUB_00733 SM00278 Helix-hairpin-helix DNA-binding motif class 1 BSUB_00733 SM00292 breast cancer carboxy-terminal domain BSUB_00733 SM00532 Ligase N family BSUB_00740 SM00845 GatB domain BSUB_00743 SM00046 Diacylglycerol kinase catalytic domain (presumed) BSUB_00748 SM00487 DEAD-like helicases superfamily BSUB_00749 SM00974 BSUB_00749 BSUB_00755 SM00028 Tetratricopeptide repeats BSUB_00768 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BSUB_00768 SM00387 Histidine kinase-like ATPases BSUB_00769 SM00342 helix_turn_helix, arabinose operon control protein BSUB_00769 SM00448 cheY-homologous receiver domain BSUB_00774 SM00342 helix_turn_helix, arabinose operon control protein BSUB_00796 SM00347 helix_turn_helix multiple antibiotic resistance protein BSUB_00810 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BSUB_00811 SM00382 ATPases associated with a variety of cellular activities BSUB_00813 SM00422 helix_turn_helix, mercury resistance BSUB_00816 SM00382 ATPases associated with a variety of cellular activities BSUB_00817 SM00487 DEAD-like helicases superfamily BSUB_00817 SM00490 helicase superfamily c-terminal domain BSUB_00819 SM00829 Enoylreductase BSUB_00823 SM00382 ATPases associated with a variety of cellular activities BSUB_00830 SM00656 BSUB_00830 BSUB_00832 SM00387 Histidine kinase-like ATPases BSUB_00833 SM00448 cheY-homologous receiver domain BSUB_00837 SM00849 Metallo-beta-lactamase superfamily BSUB_00855 SM00642 Alpha-amylase domain BSUB_00856 SM00345 helix_turn_helix gluconate operon transcriptional repressor BSUB_00856 SM00866 BSUB_00856 BSUB_00862 SM00226 Low molecular weight phosphatase family BSUB_00875 SM00478 endonuclease III BSUB_00882 SM00861 Transketolase, pyrimidine binding domain BSUB_00885 SM00382 ATPases associated with a variety of cellular activities BSUB_00896 SM00382 ATPases associated with a variety of cellular activities BSUB_00897 SM00382 ATPases associated with a variety of cellular activities BSUB_00900 SM00342 helix_turn_helix, arabinose operon control protein BSUB_00904 SM00387 Histidine kinase-like ATPases BSUB_00905 SM00421 helix_turn_helix, Lux Regulon BSUB_00905 SM00448 cheY-homologous receiver domain BSUB_00906 SM00382 ATPases associated with a variety of cellular activities BSUB_00916 SM00347 helix_turn_helix multiple antibiotic resistance protein BSUB_00931 SM00287 Bacterial SH3 domain homologues BSUB_00937 SM00478 endonuclease III BSUB_00937 SM00525 BSUB_00937 BSUB_00943 SM00382 ATPases associated with a variety of cellular activities BSUB_00976 SM01060 BSUB_00976 BSUB_00977 SM00382 ATPases associated with a variety of cellular activities BSUB_00978 SM00062 Bacterial periplasmic substrate-binding proteins BSUB_00984 SM00530 Helix-turn-helix XRE-family like proteins BSUB_00987 SM00567 E-Z type HEAT repeats BSUB_00993 SM00763 PrkA AAA domain BSUB_00995 SM00347 helix_turn_helix multiple antibiotic resistance protein BSUB_01002 SM00345 helix_turn_helix gluconate operon transcriptional repressor BSUB_01003 SM00382 ATPases associated with a variety of cellular activities BSUB_01004 SM00382 ATPases associated with a variety of cellular activities BSUB_01006 SM00357 Cold shock protein domain BSUB_01008 SM00267 diguanylate cyclase BSUB_01014 SM00318 Staphylococcal nuclease homologues BSUB_01016 SM00363 S4 RNA-binding domain BSUB_01018 SM00116 Domain in cystathionine beta-synthase and other proteins. BSUB_01027 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. BSUB_01027 SM00387 Histidine kinase-like ATPases BSUB_01028 SM00421 helix_turn_helix, Lux Regulon BSUB_01028 SM00448 cheY-homologous receiver domain BSUB_01032 SM00257 Lysin motif BSUB_01036 SM00098 Alkaline phosphatase homologues BSUB_01037 SM00257 Lysin motif BSUB_01043 SM00345 helix_turn_helix gluconate operon transcriptional repressor BSUB_01049 SM00563 Phosphate acyltransferases BSUB_01050 SM01091 Transporter associated domain BSUB_01051 SM00422 helix_turn_helix, mercury resistance BSUB_01054 SM01091 Transporter associated domain BSUB_01066 SM00382 ATPases associated with a variety of cellular activities BSUB_01067 SM00382 ATPases associated with a variety of cellular activities BSUB_01079 SM00729 Elongator protein 3, MiaB family, Radical SAM BSUB_01085 SM00382 ATPases associated with a variety of cellular activities BSUB_01089 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BSUB_01095 SM00347 helix_turn_helix multiple antibiotic resistance protein BSUB_01101 SM00382 ATPases associated with a variety of cellular activities BSUB_01118 SM01022 BSUB_01118 BSUB_01121 SM00849 Metallo-beta-lactamase superfamily BSUB_01129 SM00829 Enoylreductase BSUB_01131 SM00855 Phosphoglycerate mutase family BSUB_01135 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BSUB_01138 SM00914 BSUB_01138 BSUB_01141 SM00894 Excalibur calcium-binding domain BSUB_01148 SM00347 helix_turn_helix multiple antibiotic resistance protein BSUB_01153 SM00354 helix_turn _helix lactose operon repressor BSUB_01180 SM00342 helix_turn_helix, arabinose operon control protein BSUB_01181 SM00354 helix_turn _helix lactose operon repressor BSUB_01185 SM00345 helix_turn_helix gluconate operon transcriptional repressor BSUB_01194 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain BSUB_01200 SM00316 Ribosomal protein S1-like RNA-binding domain BSUB_01202 SM00752 Horizontally Transferred TransMembrane Domain BSUB_01218 SM00859 Semialdehyde dehydrogenase, NAD binding domain BSUB_01222 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain BSUB_01223 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain BSUB_01233 SM00825 Beta-ketoacyl synthase BSUB_01235 SM00382 ATPases associated with a variety of cellular activities BSUB_01236 SM00382 ATPases associated with a variety of cellular activities BSUB_01246 SM00382 ATPases associated with a variety of cellular activities BSUB_01247 SM00382 ATPases associated with a variety of cellular activities BSUB_01260 SM01118 BSUB_01260 BSUB_01262 SM00954 Region found in RelA / SpoT proteins BSUB_01306 SM00635 Bacterial Ig-like domain 2 BSUB_01324 SM00926 Molybdopterin oxidoreductase Fe4S4 domain BSUB_01324 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region BSUB_01334 SM00382 ATPases associated with a variety of cellular activities BSUB_01336 SM00835 Cupin BSUB_01342 SM00829 Enoylreductase BSUB_01346 SM00354 helix_turn _helix lactose operon repressor BSUB_01348 SM00858 BSUB_01348 BSUB_01351 SM00382 ATPases associated with a variety of cellular activities BSUB_01352 SM00028 Tetratricopeptide repeats BSUB_01355 SM00257 Lysin motif BSUB_01355 SM00644 BSUB_01355 BSUB_01360 SM00530 Helix-turn-helix XRE-family like proteins BSUB_01363 SM00382 ATPases associated with a variety of cellular activities BSUB_01383 SM00257 Lysin motif BSUB_01396 SM00257 Lysin motif BSUB_01396 SM00644 BSUB_01396 BSUB_01407 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. BSUB_01412 SM00382 ATPases associated with a variety of cellular activities BSUB_01415 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain BSUB_01417 SM00382 ATPases associated with a variety of cellular activities BSUB_01429 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase BSUB_01432 SM00347 helix_turn_helix multiple antibiotic resistance protein BSUB_01440 SM00382 ATPases associated with a variety of cellular activities BSUB_01443 SM00448 cheY-homologous receiver domain BSUB_01443 SM00862 Transcriptional regulatory protein, C terminal BSUB_01444 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BSUB_01444 SM00387 Histidine kinase-like ATPases BSUB_01444 SM00388 His Kinase A (phosphoacceptor) domain BSUB_01448 SM00116 Domain in cystathionine beta-synthase and other proteins. BSUB_01448 SM00924 MgtE intracellular N domain BSUB_01449 SM00422 helix_turn_helix, mercury resistance BSUB_01452 SM00347 helix_turn_helix multiple antibiotic resistance protein BSUB_01459 SM00559 Ku70 and Ku80 are 70kDa and 80kDa subunits of the Lupus Ku autoantigen BSUB_01460 SM00052 Putative diguanylate phosphodiesterase BSUB_01460 SM00267 diguanylate cyclase BSUB_01472 SM00091 PAS domain BSUB_01472 SM00387 Histidine kinase-like ATPases BSUB_01472 SM00388 His Kinase A (phosphoacceptor) domain BSUB_01481 SM01007 Class II Aldolase and Adducin N-terminal domain BSUB_01486 SM00387 Histidine kinase-like ATPases BSUB_01486 SM00388 His Kinase A (phosphoacceptor) domain BSUB_01487 SM00347 helix_turn_helix multiple antibiotic resistance protein BSUB_01490 SM00382 ATPases associated with a variety of cellular activities BSUB_01490 SM01086 C-terminal, D2-small domain, of ClpB protein BSUB_01497 SM00822 BSUB_01497 BSUB_01498 SM00257 Lysin motif BSUB_01499 SM00257 Lysin motif BSUB_01500 SM00636 BSUB_01500 BSUB_01512 SM00354 helix_turn _helix lactose operon repressor BSUB_01513 SM01061 CAT RNA binding domain BSUB_01520 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BSUB_01520 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BSUB_01524 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) BSUB_01524 SM00091 PAS domain BSUB_01524 SM00387 Histidine kinase-like ATPases BSUB_01524 SM00388 His Kinase A (phosphoacceptor) domain BSUB_01527 SM00260 Two component signalling adaptor domain BSUB_01527 SM00448 cheY-homologous receiver domain BSUB_01530 SM00257 Lysin motif BSUB_01536 SM00052 Putative diguanylate phosphodiesterase BSUB_01555 SM00852 Probable molybdopterin binding domain BSUB_01559 SM00382 ATPases associated with a variety of cellular activities BSUB_01560 SM00382 ATPases associated with a variety of cellular activities BSUB_01563 SM00382 ATPases associated with a variety of cellular activities BSUB_01564 SM01066 Carbohydrate binding domain BSUB_01565 SM00420 helix_turn_helix, Deoxyribose operon repressor BSUB_01565 SM01134 BSUB_01565 BSUB_01570 SM00382 ATPases associated with a variety of cellular activities BSUB_01575 SM00966 SpoVT / AbrB like domain BSUB_01576 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) BSUB_01576 SM00091 PAS domain BSUB_01576 SM00387 Histidine kinase-like ATPases BSUB_01576 SM00388 His Kinase A (phosphoacceptor) domain BSUB_01580 SM00849 Metallo-beta-lactamase superfamily BSUB_01587 SM00861 Transketolase, pyrimidine binding domain BSUB_01606 SM00838 Elongation factor G C-terminus BSUB_01610 SM00670 Large family of predicted nucleotide-binding domains BSUB_01615 SM00878 Biotin carboxylase C-terminal domain BSUB_01624 SM00116 Domain in cystathionine beta-synthase and other proteins. BSUB_01634 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. BSUB_01646 SM00740 BSUB_01646 BSUB_01647 SM00740 BSUB_01647 BSUB_01658 SM00842 Cell division protein FtsA BSUB_01659 SM00864 Tubulin/FtsZ family, GTPase domain BSUB_01659 SM00865 Tubulin/FtsZ family, C-terminal domain BSUB_01664 SM00382 ATPases associated with a variety of cellular activities BSUB_01671 SM00363 S4 RNA-binding domain BSUB_01676 SM00363 S4 RNA-binding domain BSUB_01681 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain BSUB_01682 SM00851 MGS-like domain BSUB_01682 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain BSUB_01682 SM01209 BSUB_01682 BSUB_01685 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family BSUB_01696 SM00831 Cation transporter/ATPase, N-terminus BSUB_01699 SM00072 Guanylate kinase homologues. BSUB_01700 SM01409 BSUB_01700 BSUB_01702 SM00487 DEAD-like helicases superfamily BSUB_01702 SM00490 helicase superfamily c-terminal domain BSUB_01707 SM00331 Sigma factor PP2C-like phosphatases BSUB_01707 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain BSUB_01708 SM00220 Serine/Threonine protein kinases, catalytic domain BSUB_01708 SM00740 BSUB_01708 BSUB_01711 SM00983 Thiamin pyrophosphokinase, vitamin B1 binding domain BSUB_01715 SM01120 BSUB_01715 BSUB_01715 SM01121 BSUB_01715 BSUB_01718 SM00487 DEAD-like helicases superfamily BSUB_01718 SM00490 helicase superfamily c-terminal domain BSUB_01721 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. BSUB_01722 SM00822 BSUB_01722 BSUB_01724 SM00358 Double-stranded RNA binding motif BSUB_01724 SM00535 Ribonuclease III family BSUB_01725 SM00968 SMC proteins Flexible Hinge Domain BSUB_01726 SM00382 ATPases associated with a variety of cellular activities BSUB_01726 SM00962 SRP54-type protein, GTPase domain BSUB_01726 SM00963 SRP54-type protein, helical bundle domain BSUB_01729 SM00382 ATPases associated with a variety of cellular activities BSUB_01729 SM00962 SRP54-type protein, GTPase domain BSUB_01729 SM00963 SRP54-type protein, helical bundle domain BSUB_01741 SM00881 CoA binding domain BSUB_01743 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain BSUB_01743 SM00437 Bacterial DNA topoisomerase I DNA-binding domain BSUB_01743 SM00493 BSUB_01743 BSUB_01747 SM00382 ATPases associated with a variety of cellular activities BSUB_01747 SM01086 C-terminal, D2-small domain, of ClpB protein BSUB_01755 SM00382 ATPases associated with a variety of cellular activities BSUB_01765 SM00448 cheY-homologous receiver domain BSUB_01772 SM00962 SRP54-type protein, GTPase domain BSUB_01774 SM00448 cheY-homologous receiver domain BSUB_01775 SM00073 Histidine Phosphotransfer domain BSUB_01775 SM00260 Two component signalling adaptor domain BSUB_01775 SM00387 Histidine kinase-like ATPases BSUB_01775 SM01231 BSUB_01775 BSUB_01776 SM00260 Two component signalling adaptor domain BSUB_01788 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. BSUB_01790 SM00479 BSUB_01790 BSUB_01790 SM00481 DNA polymerase alpha chain like domain BSUB_01792 SM00316 Ribosomal protein S1-like RNA-binding domain BSUB_01792 SM00322 K homology RNA-binding domain BSUB_01799 SM00904 Riboflavin kinase BSUB_01800 SM01387 BSUB_01800 BSUB_01801 SM00316 Ribosomal protein S1-like RNA-binding domain BSUB_01801 SM00322 K homology RNA-binding domain BSUB_01807 SM00859 Semialdehyde dehydrogenase, NAD binding domain BSUB_01809 SM01130 BSUB_01809 BSUB_01810 SM00849 Metallo-beta-lactamase superfamily BSUB_01813 SM00382 ATPases associated with a variety of cellular activities BSUB_01813 SM00843 BSUB_01813 BSUB_01814 SM00345 helix_turn_helix gluconate operon transcriptional repressor BSUB_01814 SM00866 BSUB_01814 BSUB_01822 SM00530 Helix-turn-helix XRE-family like proteins BSUB_01824 SM00852 Probable molybdopterin binding domain BSUB_01825 SM00382 ATPases associated with a variety of cellular activities BSUB_01827 SM00322 K homology RNA-binding domain BSUB_01827 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BSUB_01830 SM00829 Enoylreductase BSUB_01832 SM00729 Elongator protein 3, MiaB family, Radical SAM BSUB_01835 SM00533 DNA-binding domain of DNA mismatch repair MUTS family BSUB_01835 SM00534 ATPase domain of DNA mismatch repair MUTS family BSUB_01836 SM00853 MutL C terminal dimerisation domain BSUB_01836 SM01340 BSUB_01836 BSUB_01840 SM00849 Metallo-beta-lactamase superfamily BSUB_01841 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. BSUB_01842 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. BSUB_01843 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. BSUB_01845 SM00825 Beta-ketoacyl synthase BSUB_01849 SM00822 BSUB_01849 BSUB_01849 SM00823 Phosphopantetheine attachment site BSUB_01849 SM00825 Beta-ketoacyl synthase BSUB_01849 SM00826 BSUB_01849 BSUB_01849 SM01294 BSUB_01849 BSUB_01850 SM00822 BSUB_01850 BSUB_01850 SM00823 Phosphopantetheine attachment site BSUB_01850 SM00825 Beta-ketoacyl synthase BSUB_01850 SM00826 BSUB_01850 BSUB_01850 SM01294 BSUB_01850 BSUB_01851 SM00822 BSUB_01851 BSUB_01851 SM00823 Phosphopantetheine attachment site BSUB_01851 SM00825 Beta-ketoacyl synthase BSUB_01851 SM00826 BSUB_01851 BSUB_01851 SM01294 BSUB_01851 BSUB_01852 SM00822 BSUB_01852 BSUB_01852 SM00823 Phosphopantetheine attachment site BSUB_01852 SM00825 Beta-ketoacyl synthase BSUB_01852 SM00826 BSUB_01852 BSUB_01852 SM01294 BSUB_01852 BSUB_01853 SM00823 Phosphopantetheine attachment site BSUB_01853 SM00825 Beta-ketoacyl synthase BSUB_01853 SM01294 BSUB_01853 BSUB_01856 SM00849 Metallo-beta-lactamase superfamily BSUB_01872 SM00646 BSUB_01872 BSUB_01873 SM00382 ATPases associated with a variety of cellular activities BSUB_01876 SM00422 helix_turn_helix, mercury resistance BSUB_01877 SM01230 BSUB_01877 BSUB_01881 SM00860 SMI1 / KNR4 family BSUB_01894 SM00318 Staphylococcal nuclease homologues BSUB_01896 SM01005 Alanine racemase, C-terminal domain BSUB_01922 SM00257 Lysin motif BSUB_01923 SM00857 Resolvase, N terminal domain BSUB_01925 SM00861 Transketolase, pyrimidine binding domain BSUB_01930 SM00448 cheY-homologous receiver domain BSUB_01944 SM01207 BSUB_01944 BSUB_01945 SM00881 CoA binding domain BSUB_01946 SM00387 Histidine kinase-like ATPases BSUB_01946 SM00433 TopoisomeraseII BSUB_01947 SM00434 DNA Topoisomerase IV BSUB_01951 SM01067 Cellulose binding domain BSUB_01954 SM00606 Cellulose Binding Domain Type IV BSUB_01963 SM00878 Biotin carboxylase C-terminal domain BSUB_01969 SM00823 Phosphopantetheine attachment site BSUB_01969 SM00824 Thioesterase BSUB_01970 SM00823 Phosphopantetheine attachment site BSUB_01971 SM00823 Phosphopantetheine attachment site BSUB_01972 SM00823 Phosphopantetheine attachment site BSUB_01982 SM00829 Enoylreductase BSUB_01986 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase BSUB_01989 SM00822 BSUB_01989 BSUB_01996 SM00926 Molybdopterin oxidoreductase Fe4S4 domain BSUB_02001 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BSUB_02001 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BSUB_02005 SM00656 BSUB_02005 BSUB_02008 SM00835 Cupin BSUB_02016 SM00530 Helix-turn-helix XRE-family like proteins BSUB_02028 SM00530 Helix-turn-helix XRE-family like proteins BSUB_02045 SM00860 SMI1 / KNR4 family BSUB_02047 SM00860 SMI1 / KNR4 family BSUB_02049 SM00710 Parallel beta-helix repeats BSUB_02051 SM00342 helix_turn_helix, arabinose operon control protein BSUB_02054 SM00849 Metallo-beta-lactamase superfamily BSUB_02055 SM00871 Bacterial transcription activator, effector binding domain BSUB_02058 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor BSUB_02066 SM00421 helix_turn_helix, Lux Regulon BSUB_02066 SM00448 cheY-homologous receiver domain BSUB_02067 SM00257 Lysin motif BSUB_02068 SM00341 Helicase and RNase D C-terminal BSUB_02068 SM00487 DEAD-like helicases superfamily BSUB_02068 SM00490 helicase superfamily c-terminal domain BSUB_02068 SM00956 BSUB_02068 BSUB_02084 SM00861 Transketolase, pyrimidine binding domain BSUB_02085 SM00327 von Willebrand factor (vWF) type A domain BSUB_02086 SM00382 ATPases associated with a variety of cellular activities BSUB_02088 SM00257 Lysin motif BSUB_02108 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. BSUB_02108 SM00245 tail specific protease BSUB_02115 SM00014 Acid phosphatase homologues BSUB_02124 SM00882 Coenzyme A transferase BSUB_02125 SM00882 Coenzyme A transferase BSUB_02138 SM00530 Helix-turn-helix XRE-family like proteins BSUB_02156 SM00871 Bacterial transcription activator, effector binding domain BSUB_02160 SM00507 HNH nucleases BSUB_02191 SM00481 DNA polymerase alpha chain like domain BSUB_02202 SM00710 Parallel beta-helix repeats BSUB_02216 SM00507 HNH nucleases BSUB_02235 SM00530 Helix-turn-helix XRE-family like proteins BSUB_02239 SM00530 Helix-turn-helix XRE-family like proteins BSUB_02262 SM00530 Helix-turn-helix XRE-family like proteins BSUB_02265 SM00411 bacterial (prokaryotic) histone like domain BSUB_02304 SM00644 BSUB_02304 BSUB_02310 SM00382 ATPases associated with a variety of cellular activities BSUB_02320 SM00860 SMI1 / KNR4 family BSUB_02321 SM00860 SMI1 / KNR4 family BSUB_02323 SM00860 SMI1 / KNR4 family BSUB_02325 SM00318 Staphylococcal nuclease homologues BSUB_02325 SM00894 Excalibur calcium-binding domain BSUB_02331 SM00857 Resolvase, N terminal domain BSUB_02335 SM00347 helix_turn_helix multiple antibiotic resistance protein BSUB_02343 SM00382 ATPases associated with a variety of cellular activities BSUB_02353 SM00567 E-Z type HEAT repeats BSUB_02353 SM00932 Scaffold protein Nfu/NifU N terminal BSUB_02354 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BSUB_02358 SM00357 Cold shock protein domain BSUB_02366 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs BSUB_02366 SM00475 5'-3' exonuclease BSUB_02378 SM00354 helix_turn _helix lactose operon repressor BSUB_02381 SM00491 BSUB_02381 BSUB_02384 SM00981 BSUB_02384 BSUB_02389 SM00487 DEAD-like helicases superfamily BSUB_02389 SM00490 helicase superfamily c-terminal domain BSUB_02401 SM00478 endonuclease III BSUB_02401 SM00525 BSUB_02401 BSUB_02407 SM00479 BSUB_02407 BSUB_02407 SM00487 DEAD-like helicases superfamily BSUB_02407 SM00491 BSUB_02407 BSUB_02415 SM00851 MGS-like domain BSUB_02425 SM00914 BSUB_02425 BSUB_02426 SM00028 Tetratricopeptide repeats BSUB_02439 SM00138 Methyltransferase, chemotaxis proteins BSUB_02440 SM00562 BSUB_02440 BSUB_02446 SM00411 bacterial (prokaryotic) histone like domain BSUB_02456 SM01240 BSUB_02456 BSUB_02457 SM00316 Ribosomal protein S1-like RNA-binding domain BSUB_02465 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase BSUB_02469 SM00257 Lysin motif BSUB_02471 SM00487 DEAD-like helicases superfamily BSUB_02471 SM00490 helicase superfamily c-terminal domain BSUB_02480 SM00091 PAS domain BSUB_02480 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BSUB_02480 SM00387 Histidine kinase-like ATPases BSUB_02480 SM00388 His Kinase A (phosphoacceptor) domain BSUB_02481 SM00448 cheY-homologous receiver domain BSUB_02481 SM00862 Transcriptional regulatory protein, C terminal BSUB_02485 SM00363 S4 RNA-binding domain BSUB_02488 SM00936 Penicillin-binding protein 5, C-terminal domain BSUB_02517 SM00387 Histidine kinase-like ATPases BSUB_02519 SM00936 Penicillin-binding protein 5, C-terminal domain BSUB_02527 SM00919 Malic enzyme, NAD binding domain BSUB_02527 SM01274 BSUB_02527 BSUB_02530 SM00870 BSUB_02530 BSUB_02531 SM00530 Helix-turn-helix XRE-family like proteins BSUB_02552 SM00849 Metallo-beta-lactamase superfamily BSUB_02557 SM00849 Metallo-beta-lactamase superfamily BSUB_02559 SM01350 BSUB_02559 BSUB_02570 SM00382 ATPases associated with a variety of cellular activities BSUB_02572 SM00062 Bacterial periplasmic substrate-binding proteins BSUB_02572 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. BSUB_02574 SM00046 Diacylglycerol kinase catalytic domain (presumed) BSUB_02576 SM00422 helix_turn_helix, mercury resistance BSUB_02578 SM00861 Transketolase, pyrimidine binding domain BSUB_02582 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase BSUB_02584 SM00091 PAS domain BSUB_02584 SM00382 ATPases associated with a variety of cellular activities BSUB_02593 SM00646 BSUB_02593 BSUB_02597 SM00448 cheY-homologous receiver domain BSUB_02598 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. BSUB_02601 SM00363 S4 RNA-binding domain BSUB_02602 SM00861 Transketolase, pyrimidine binding domain BSUB_02609 SM00878 Biotin carboxylase C-terminal domain BSUB_02618 SM00382 ATPases associated with a variety of cellular activities BSUB_02620 SM00841 Elongation factor P, C-terminal BSUB_02620 SM01185 BSUB_02620 BSUB_02627 SM00529 Helix-turn-helix diphteria tox regulatory element BSUB_02629 SM00450 Rhodanese Homology Domain BSUB_02633 SM00487 DEAD-like helicases superfamily BSUB_02633 SM00490 helicase superfamily c-terminal domain BSUB_02636 SM00530 Helix-turn-helix XRE-family like proteins BSUB_02648 SM00382 ATPases associated with a variety of cellular activities BSUB_02651 SM01091 Transporter associated domain BSUB_02656 SM00849 Metallo-beta-lactamase superfamily BSUB_02660 SM00631 BSUB_02660 BSUB_02664 SM00028 Tetratricopeptide repeats BSUB_02672 SM00382 ATPases associated with a variety of cellular activities BSUB_02673 SM00382 ATPases associated with a variety of cellular activities BSUB_02683 SM00257 Lysin motif BSUB_02690 SM00518 AP endonuclease family 2 BSUB_02691 SM00487 DEAD-like helicases superfamily BSUB_02691 SM00490 helicase superfamily c-terminal domain BSUB_02698 SM00400 zinc finger BSUB_02698 SM00493 BSUB_02698 BSUB_02701 SM00116 Domain in cystathionine beta-synthase and other proteins. BSUB_02710 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BSUB_02720 SM00729 Elongator protein 3, MiaB family, Radical SAM BSUB_02723 SM00271 DnaJ molecular chaperone homology domain BSUB_02727 SM00729 Elongator protein 3, MiaB family, Radical SAM BSUB_02728 SM00838 Elongation factor G C-terminus BSUB_02735 SM00849 Metallo-beta-lactamase superfamily BSUB_02737 SM00278 Helix-hairpin-helix DNA-binding motif class 1 BSUB_02741 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BSUB_02743 SM01103 BSUB_02743 BSUB_02749 SM00644 BSUB_02749 BSUB_02751 SM01350 BSUB_02751 BSUB_02755 SM00857 Resolvase, N terminal domain BSUB_02756 SM00226 Low molecular weight phosphatase family BSUB_02759 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor BSUB_02761 SM00028 Tetratricopeptide repeats BSUB_02768 SM00644 BSUB_02768 BSUB_02780 SM00257 Lysin motif BSUB_02805 SM00382 ATPases associated with a variety of cellular activities BSUB_02811 SM00530 Helix-turn-helix XRE-family like proteins BSUB_02813 SM00530 Helix-turn-helix XRE-family like proteins BSUB_02814 SM00530 Helix-turn-helix XRE-family like proteins BSUB_02821 SM00388 His Kinase A (phosphoacceptor) domain BSUB_02822 SM00448 cheY-homologous receiver domain BSUB_02822 SM00862 Transcriptional regulatory protein, C terminal BSUB_02830 SM00450 Rhodanese Homology Domain BSUB_02830 SM00849 Metallo-beta-lactamase superfamily BSUB_02831 SM00450 Rhodanese Homology Domain BSUB_02837 SM00422 helix_turn_helix, mercury resistance BSUB_02840 SM01091 Transporter associated domain BSUB_02852 SM00344 helix_turn_helix ASNC type BSUB_02873 SM00287 Bacterial SH3 domain homologues BSUB_02881 SM00422 helix_turn_helix, mercury resistance BSUB_02883 SM00829 Enoylreductase BSUB_02885 SM00640 Glycosyl hydrolases family 32 BSUB_02890 SM00382 ATPases associated with a variety of cellular activities BSUB_02904 SM00926 Molybdopterin oxidoreductase Fe4S4 domain BSUB_02904 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region BSUB_02910 SM00650 Ribosomal RNA adenine dimethylases BSUB_02921 SM00732 Likely ribonuclease with RNase H fold. BSUB_02923 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain BSUB_02925 SM00382 ATPases associated with a variety of cellular activities BSUB_02926 SM00062 Bacterial periplasmic substrate-binding proteins BSUB_02926 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. BSUB_02932 SM00382 ATPases associated with a variety of cellular activities BSUB_02933 SM00028 Tetratricopeptide repeats BSUB_02937 SM00382 ATPases associated with a variety of cellular activities BSUB_02942 SM00287 Bacterial SH3 domain homologues BSUB_02942 SM00646 BSUB_02942 BSUB_02944 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BSUB_02944 SM00954 Region found in RelA / SpoT proteins BSUB_02954 SM01323 BSUB_02954 BSUB_02958 SM00382 ATPases associated with a variety of cellular activities BSUB_02959 SM00278 Helix-hairpin-helix DNA-binding motif class 1 BSUB_02970 SM00257 Lysin motif BSUB_02979 SM01317 BSUB_02979 BSUB_02998 SM00257 Lysin motif BSUB_03000 SM01004 Delta-aminolevulinic acid dehydratase BSUB_03007 SM00382 ATPases associated with a variety of cellular activities BSUB_03007 SM00464 Found in ATP-dependent protease La (LON) BSUB_03008 SM00382 ATPases associated with a variety of cellular activities BSUB_03009 SM00382 ATPases associated with a variety of cellular activities BSUB_03009 SM00994 ClpX C4-type zinc finger BSUB_03009 SM01086 C-terminal, D2-small domain, of ClpB protein BSUB_03014 SM01329 BSUB_03014 BSUB_03015 SM00917 LeuA allosteric (dimerisation) domain BSUB_03026 SM00909 Sporulation and spore germination BSUB_03028 SM00347 helix_turn_helix multiple antibiotic resistance protein BSUB_03029 SM00421 helix_turn_helix, Lux Regulon BSUB_03037 SM00465 GIY-YIG type nucleases (URI domain) BSUB_03039 SM00813 Alpha-L-arabinofuranosidase C-terminus BSUB_03040 SM00893 Electron transfer flavoprotein domain BSUB_03041 SM00893 Electron transfer flavoprotein domain BSUB_03046 SM00463 Small MutS-related domain BSUB_03046 SM00533 DNA-binding domain of DNA mismatch repair MUTS family BSUB_03046 SM00534 ATPase domain of DNA mismatch repair MUTS family BSUB_03047 SM00278 Helix-hairpin-helix DNA-binding motif class 1 BSUB_03047 SM00481 DNA polymerase alpha chain like domain BSUB_03047 SM00483 DNA polymerase X family BSUB_03051 SM00873 B3/4 domain BSUB_03051 SM00874 tRNA synthetase B5 domain BSUB_03051 SM00896 Ferredoxin-fold anticodon binding domain BSUB_03053 SM00967 RNA 2'-O ribose methyltransferase substrate binding BSUB_03060 SM00813 Alpha-L-arabinofuranosidase C-terminus BSUB_03066 SM01007 Class II Aldolase and Adducin N-terminal domain BSUB_03080 SM00448 cheY-homologous receiver domain BSUB_03080 SM00850 LytTr DNA-binding domain BSUB_03081 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. BSUB_03081 SM00387 Histidine kinase-like ATPases BSUB_03083 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain BSUB_03086 SM00382 ATPases associated with a variety of cellular activities BSUB_03090 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain BSUB_03096 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain BSUB_03096 SM01232 BSUB_03096 BSUB_03097 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs BSUB_03097 SM00474 3'-5' exonuclease BSUB_03097 SM00475 5'-3' exonuclease BSUB_03097 SM00482 DNA polymerase A domain BSUB_03098 SM00091 PAS domain BSUB_03098 SM00387 Histidine kinase-like ATPases BSUB_03098 SM00388 His Kinase A (phosphoacceptor) domain BSUB_03099 SM00448 cheY-homologous receiver domain BSUB_03099 SM00862 Transcriptional regulatory protein, C terminal BSUB_03101 SM01329 BSUB_03101 BSUB_03110 SM00919 Malic enzyme, NAD binding domain BSUB_03110 SM01274 BSUB_03110 BSUB_03111 SM00481 DNA polymerase alpha chain like domain BSUB_03117 SM00116 Domain in cystathionine beta-synthase and other proteins. BSUB_03120 SM00904 Riboflavin kinase BSUB_03124 SM00382 ATPases associated with a variety of cellular activities BSUB_03127 SM00062 Bacterial periplasmic substrate-binding proteins BSUB_03128 SM00062 Bacterial periplasmic substrate-binding proteins BSUB_03131 SM00849 Metallo-beta-lactamase superfamily BSUB_03136 SM00852 Probable molybdopterin binding domain BSUB_03148 SM00981 BSUB_03148 BSUB_03154 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. BSUB_03155 SM00267 diguanylate cyclase BSUB_03156 SM00363 S4 RNA-binding domain BSUB_03156 SM01390 BSUB_03156 BSUB_03158 SM00363 S4 RNA-binding domain BSUB_03162 SM00116 Domain in cystathionine beta-synthase and other proteins. BSUB_03166 SM00354 helix_turn _helix lactose operon repressor BSUB_03167 SM00830 Chorismate mutase type II BSUB_03172 SM00382 ATPases associated with a variety of cellular activities BSUB_03172 SM00843 BSUB_03172 BSUB_03179 SM00919 Malic enzyme, NAD binding domain BSUB_03179 SM01274 BSUB_03179 BSUB_03180 SM00849 Metallo-beta-lactamase superfamily BSUB_03184 SM00642 Alpha-amylase domain BSUB_03185 SM00046 Diacylglycerol kinase catalytic domain (presumed) BSUB_03192 SM00382 ATPases associated with a variety of cellular activities BSUB_03193 SM00420 helix_turn_helix, Deoxyribose operon repressor BSUB_03194 SM00363 S4 RNA-binding domain BSUB_03204 SM00342 helix_turn_helix, arabinose operon control protein BSUB_03209 SM00729 Elongator protein 3, MiaB family, Radical SAM BSUB_03209 SM00876 Biotin and Thiamin Synthesis associated domain BSUB_03215 SM00354 helix_turn _helix lactose operon repressor BSUB_03220 SM00450 Rhodanese Homology Domain BSUB_03223 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) BSUB_03223 SM00091 PAS domain BSUB_03227 SM00382 ATPases associated with a variety of cellular activities BSUB_03228 SM00387 Histidine kinase-like ATPases BSUB_03229 SM00448 cheY-homologous receiver domain BSUB_03229 SM00862 Transcriptional regulatory protein, C terminal BSUB_03231 SM00382 ATPases associated with a variety of cellular activities BSUB_03234 SM00382 ATPases associated with a variety of cellular activities BSUB_03235 SM00345 helix_turn_helix gluconate operon transcriptional repressor BSUB_03238 SM00729 Elongator protein 3, MiaB family, Radical SAM BSUB_03250 SM00382 ATPases associated with a variety of cellular activities BSUB_03258 SM01234 BSUB_03258 BSUB_03259 SM00947 Carbonic anhydrase BSUB_03266 SM00382 ATPases associated with a variety of cellular activities BSUB_03268 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain BSUB_03276 SM00984 UDP binding domain BSUB_03288 SM00642 Alpha-amylase domain BSUB_03315 SM00244 prohibitin homologues BSUB_03326 SM00047 Lysozyme subfamily 2 BSUB_03336 SM00420 helix_turn_helix, Deoxyribose operon repressor BSUB_03336 SM01134 BSUB_03336 BSUB_03337 SM01007 Class II Aldolase and Adducin N-terminal domain BSUB_03338 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BSUB_03338 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BSUB_03338 SM00319 Homologues of the ligand binding domain of Tar BSUB_03339 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BSUB_03339 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BSUB_03339 SM00319 Homologues of the ligand binding domain of Tar BSUB_03340 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BSUB_03340 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BSUB_03340 SM00319 Homologues of the ligand binding domain of Tar BSUB_03341 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BSUB_03341 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BSUB_03341 SM00319 Homologues of the ligand binding domain of Tar BSUB_03345 SM00642 Alpha-amylase domain BSUB_03346 SM01091 Transporter associated domain BSUB_03357 SM00316 Ribosomal protein S1-like RNA-binding domain BSUB_03359 SM00344 helix_turn_helix ASNC type BSUB_03363 SM00387 Histidine kinase-like ATPases BSUB_03363 SM00388 His Kinase A (phosphoacceptor) domain BSUB_03364 SM01298 BSUB_03364 BSUB_03365 SM00479 BSUB_03365 BSUB_03371 SM00091 PAS domain BSUB_03371 SM00387 Histidine kinase-like ATPases BSUB_03372 SM00448 cheY-homologous receiver domain BSUB_03374 SM00382 ATPases associated with a variety of cellular activities BSUB_03387 SM00421 helix_turn_helix, Lux Regulon BSUB_03387 SM00448 cheY-homologous receiver domain BSUB_03388 SM00387 Histidine kinase-like ATPases BSUB_03393 SM00052 Putative diguanylate phosphodiesterase BSUB_03402 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BSUB_03411 SM01002 Alanine dehydrogenase/PNT, C-terminal domain BSUB_03411 SM01003 Alanine dehydrogenase/PNT, N-terminal domain BSUB_03413 SM00923 MbtH-like protein BSUB_03414 SM00823 Phosphopantetheine attachment site BSUB_03414 SM00824 Thioesterase BSUB_03431 SM01240 BSUB_03431 BSUB_03451 SM00729 Elongator protein 3, MiaB family, Radical SAM BSUB_03467 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain BSUB_03474 SM00382 ATPases associated with a variety of cellular activities BSUB_03475 SM00345 helix_turn_helix gluconate operon transcriptional repressor BSUB_03475 SM00866 BSUB_03475 BSUB_03481 SM00465 GIY-YIG type nucleases (URI domain) BSUB_03486 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor BSUB_03491 SM00382 ATPases associated with a variety of cellular activities BSUB_03496 SM00382 ATPases associated with a variety of cellular activities BSUB_03496 SM00930 BSUB_03496 BSUB_03499 SM00493 BSUB_03499 BSUB_03510 SM00347 helix_turn_helix multiple antibiotic resistance protein BSUB_03517 SM00382 ATPases associated with a variety of cellular activities BSUB_03523 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. BSUB_03524 SM00448 cheY-homologous receiver domain BSUB_03524 SM00862 Transcriptional regulatory protein, C terminal BSUB_03525 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BSUB_03525 SM00387 Histidine kinase-like ATPases BSUB_03525 SM00388 His Kinase A (phosphoacceptor) domain BSUB_03533 SM00421 helix_turn_helix, Lux Regulon BSUB_03533 SM00448 cheY-homologous receiver domain BSUB_03534 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BSUB_03534 SM00387 Histidine kinase-like ATPases BSUB_03541 SM00382 ATPases associated with a variety of cellular activities BSUB_03546 SM00387 Histidine kinase-like ATPases BSUB_03546 SM00388 His Kinase A (phosphoacceptor) domain BSUB_03547 SM00448 cheY-homologous receiver domain BSUB_03547 SM00862 Transcriptional regulatory protein, C terminal BSUB_03551 SM00835 Cupin BSUB_03554 SM00382 ATPases associated with a variety of cellular activities BSUB_03556 SM00382 ATPases associated with a variety of cellular activities BSUB_03589 SM00316 Ribosomal protein S1-like RNA-binding domain BSUB_03589 SM00357 Cold shock protein domain BSUB_03589 SM00955 BSUB_03589 BSUB_03593 SM00530 Helix-turn-helix XRE-family like proteins BSUB_03594 SM00530 Helix-turn-helix XRE-family like proteins BSUB_03595 SM00530 Helix-turn-helix XRE-family like proteins BSUB_03597 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BSUB_03597 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BSUB_03601 SM00116 Domain in cystathionine beta-synthase and other proteins. BSUB_03601 SM00382 ATPases associated with a variety of cellular activities BSUB_03604 SM00752 Horizontally Transferred TransMembrane Domain BSUB_03607 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor BSUB_03611 SM00116 Domain in cystathionine beta-synthase and other proteins. BSUB_03611 SM00382 ATPases associated with a variety of cellular activities BSUB_03618 SM01192 BSUB_03618 BSUB_03618 SM01193 BSUB_03618 BSUB_03622 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain BSUB_03625 SM00345 helix_turn_helix gluconate operon transcriptional repressor BSUB_03630 SM00636 BSUB_03630 BSUB_03634 SM00421 helix_turn_helix, Lux Regulon BSUB_03634 SM00448 cheY-homologous receiver domain BSUB_03637 SM00382 ATPases associated with a variety of cellular activities BSUB_03639 SM00331 Sigma factor PP2C-like phosphatases BSUB_03645 SM00354 helix_turn _helix lactose operon repressor BSUB_03646 SM00345 helix_turn_helix gluconate operon transcriptional repressor BSUB_03646 SM00895 BSUB_03646 BSUB_03665 SM00530 Helix-turn-helix XRE-family like proteins BSUB_03674 SM00640 Glycosyl hydrolases family 32 BSUB_03685 SM00642 Alpha-amylase domain BSUB_03691 SM00642 Alpha-amylase domain BSUB_03692 SM00354 helix_turn _helix lactose operon repressor BSUB_03696 SM00947 Carbonic anhydrase BSUB_03699 SM00382 ATPases associated with a variety of cellular activities BSUB_03700 SM00387 Histidine kinase-like ATPases BSUB_03701 SM00448 cheY-homologous receiver domain BSUB_03701 SM00862 Transcriptional regulatory protein, C terminal BSUB_03711 SM00028 Tetratricopeptide repeats BSUB_03712 SM00382 ATPases associated with a variety of cellular activities BSUB_03733 SM00345 helix_turn_helix gluconate operon transcriptional repressor BSUB_03733 SM00866 BSUB_03733 BSUB_03735 SM00347 helix_turn_helix multiple antibiotic resistance protein BSUB_03738 SM00347 helix_turn_helix multiple antibiotic resistance protein BSUB_03746 SM00382 ATPases associated with a variety of cellular activities BSUB_03747 SM00487 DEAD-like helicases superfamily BSUB_03747 SM00490 helicase superfamily c-terminal domain BSUB_03752 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. BSUB_03754 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. BSUB_03754 SM00245 tail specific protease BSUB_03756 SM00382 ATPases associated with a variety of cellular activities BSUB_03759 SM00937 BSUB_03759 BSUB_03760 SM00957 SecA DEAD-like domain BSUB_03760 SM00958 SecA preprotein cross-linking domain BSUB_03778 SM00487 DEAD-like helicases superfamily BSUB_03778 SM00490 helicase superfamily c-terminal domain BSUB_03780 SM00421 helix_turn_helix, Lux Regulon BSUB_03780 SM00448 cheY-homologous receiver domain BSUB_03781 SM00387 Histidine kinase-like ATPases BSUB_03789 SM00984 UDP binding domain BSUB_03793 SM00646 BSUB_03793 BSUB_03803 SM00382 ATPases associated with a variety of cellular activities BSUB_03811 SM00047 Lysozyme subfamily 2 BSUB_03811 SM00287 Bacterial SH3 domain homologues BSUB_03821 SM00854 Bacterial capsule synthesis protein PGA_cap BSUB_03824 SM00354 helix_turn _helix lactose operon repressor BSUB_03827 SM00382 ATPases associated with a variety of cellular activities BSUB_03830 SM00287 Bacterial SH3 domain homologues BSUB_03841 SM00903 Flavin reductase like domain BSUB_03844 SM00344 helix_turn_helix ASNC type BSUB_03856 SM00984 UDP binding domain BSUB_03862 SM00487 DEAD-like helicases superfamily BSUB_03862 SM00490 helicase superfamily c-terminal domain BSUB_03864 SM00420 helix_turn_helix, Deoxyribose operon repressor BSUB_03864 SM01134 BSUB_03864 BSUB_03869 SM00387 Histidine kinase-like ATPases BSUB_03872 SM00028 Tetratricopeptide repeats BSUB_03878 SM00347 helix_turn_helix multiple antibiotic resistance protein BSUB_03880 SM00710 Parallel beta-helix repeats BSUB_03880 SM00722 Domain present in carbohydrate binding proteins and sugar hydrolses BSUB_03886 SM00938 Nitrogen regulatory protein P-II BSUB_03887 SM00014 Acid phosphatase homologues BSUB_03893 SM00155 Phospholipase D. Active site motifs. BSUB_03894 SM00422 helix_turn_helix, mercury resistance BSUB_03904 SM00028 Tetratricopeptide repeats BSUB_03905 SM00729 Elongator protein 3, MiaB family, Radical SAM BSUB_03908 SM00327 von Willebrand factor (vWF) type A domain BSUB_03909 SM00327 von Willebrand factor (vWF) type A domain BSUB_03916 SM00382 ATPases associated with a variety of cellular activities BSUB_03928 SM00226 Low molecular weight phosphatase family BSUB_03936 SM00937 BSUB_03936 BSUB_03940 SM00919 Malic enzyme, NAD binding domain BSUB_03940 SM01274 BSUB_03940 BSUB_03943 SM00357 Cold shock protein domain BSUB_03943 SM00382 ATPases associated with a variety of cellular activities BSUB_03943 SM00959 Rho termination factor, N-terminal domain BSUB_03948 SM00448 cheY-homologous receiver domain BSUB_03954 SM00155 Phospholipase D. Active site motifs. BSUB_03958 SM00382 ATPases associated with a variety of cellular activities BSUB_03959 SM00155 Phospholipase D. Active site motifs. BSUB_03963 SM00926 Molybdopterin oxidoreductase Fe4S4 domain BSUB_03966 SM00100 Cyclic nucleotide-monophosphate binding domain BSUB_03966 SM00419 helix_turn_helix, cAMP Regulatory protein BSUB_03968 SM00836 DALR anticodon binding domain BSUB_03968 SM01016 Arginyl tRNA synthetase N terminal dom BSUB_03972 SM00729 Elongator protein 3, MiaB family, Radical SAM BSUB_03981 SM00028 Tetratricopeptide repeats BSUB_03990 SM00347 helix_turn_helix multiple antibiotic resistance protein BSUB_03991 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain BSUB_03996 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BSUB_04015 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase BSUB_04023 SM00858 BSUB_04023 BSUB_04033 SM00986 Uracil DNA glycosylase superfamily BSUB_04033 SM00987 UreE urease accessory protein, C-terminal domain BSUB_04040 SM00640 Glycosyl hydrolases family 32 BSUB_04043 SM01061 CAT RNA binding domain BSUB_04074 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase BSUB_04080 SM01061 CAT RNA binding domain BSUB_04083 SM00347 helix_turn_helix multiple antibiotic resistance protein BSUB_04084 SM00363 S4 RNA-binding domain BSUB_04086 SM00954 Region found in RelA / SpoT proteins BSUB_04102 SM01060 BSUB_04102 BSUB_04105 SM00382 ATPases associated with a variety of cellular activities BSUB_04112 SM00382 ATPases associated with a variety of cellular activities BSUB_04113 SM00382 ATPases associated with a variety of cellular activities BSUB_04120 SM00382 ATPases associated with a variety of cellular activities BSUB_04130 SM00421 helix_turn_helix, Lux Regulon BSUB_04130 SM00448 cheY-homologous receiver domain BSUB_04137 SM00822 BSUB_04137 BSUB_04138 SM00882 Coenzyme A transferase BSUB_04139 SM00882 Coenzyme A transferase BSUB_04145 SM01060 BSUB_04145 BSUB_04148 SM01061 CAT RNA binding domain BSUB_04151 SM00487 DEAD-like helicases superfamily BSUB_04151 SM00490 helicase superfamily c-terminal domain BSUB_04170 SM00860 SMI1 / KNR4 family BSUB_04182 SM00941 Pyrimidine nucleoside phosphorylase C-terminal domain BSUB_04184 SM01133 BSUB_04184 BSUB_04190 SM00382 ATPases associated with a variety of cellular activities BSUB_04192 SM00062 Bacterial periplasmic substrate-binding proteins BSUB_04206 SM00382 ATPases associated with a variety of cellular activities BSUB_04207 SM00387 Histidine kinase-like ATPases BSUB_04208 SM00448 cheY-homologous receiver domain BSUB_04208 SM00862 Transcriptional regulatory protein, C terminal BSUB_04219 SM00420 helix_turn_helix, Deoxyribose operon repressor BSUB_04219 SM01134 BSUB_04219 BSUB_04224 SM00387 Histidine kinase-like ATPases BSUB_04230 SM00558 A domain family that is part of the cupin metalloenzyme superfamily. BSUB_04236 SM00564 beta-propeller repeat BSUB_04243 SM00347 helix_turn_helix multiple antibiotic resistance protein BSUB_04248 SM00345 helix_turn_helix gluconate operon transcriptional repressor BSUB_04248 SM00895 BSUB_04248 BSUB_04251 SM01350 BSUB_04251 BSUB_04257 SM00345 helix_turn_helix gluconate operon transcriptional repressor BSUB_04257 SM00866 BSUB_04257 BSUB_04260 SM00382 ATPases associated with a variety of cellular activities BSUB_04282 SM00091 PAS domain BSUB_04282 SM00382 ATPases associated with a variety of cellular activities BSUB_04283 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. BSUB_04284 SM00849 Metallo-beta-lactamase superfamily BSUB_04287 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) BSUB_04287 SM00091 PAS domain BSUB_04287 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BSUB_04287 SM00387 Histidine kinase-like ATPases BSUB_04287 SM00388 His Kinase A (phosphoacceptor) domain BSUB_04288 SM00448 cheY-homologous receiver domain BSUB_04288 SM00862 Transcriptional regulatory protein, C terminal BSUB_04293 SM00788 Adenylosuccinate synthetase BSUB_04295 SM00382 ATPases associated with a variety of cellular activities BSUB_04302 SM00267 diguanylate cyclase BSUB_04307 SM01131 BSUB_04307 BSUB_04316 SM00382 ATPases associated with a variety of cellular activities BSUB_04324 SM00849 Metallo-beta-lactamase superfamily BSUB_04325 SM00347 helix_turn_helix multiple antibiotic resistance protein BSUB_04334 SM00422 helix_turn_helix, mercury resistance BSUB_04339 SM01266 BSUB_04339 BSUB_04341 SM00354 helix_turn _helix lactose operon repressor BSUB_04347 SM00926 Molybdopterin oxidoreductase Fe4S4 domain BSUB_04351 SM00470 ParB-like nuclease domain BSUB_04354 SM00470 ParB-like nuclease domain BSUB_04356 SM01228 BSUB_04356 BSUB_04358 SM00322 K homology RNA-binding domain BSUB_04358 SM00393 Putative single-stranded nucleic acids-binding domain BSUB_04358 SM01245 BSUB_04358 BSUB_10003 SM00857 Resolvase, N terminal domain BSUB_10005 SM00650 Ribosomal RNA adenine dimethylases