I653_00005 SM00382 ATPases associated with a variety of cellular activities I653_00005 SM00760 Bacterial dnaA protein helix-turn-helix domain I653_00010 SM00480 DNA polymerase III beta subunit I653_00030 SM00387 Histidine kinase-like ATPases I653_00030 SM00433 TopoisomeraseII I653_00035 SM00434 DNA Topoisomerase IV I653_00045 SM00116 Domain in cystathionine beta-synthase and other proteins. I653_00045 SM01240 I653_00045 I653_00050 SM00936 Penicillin-binding protein 5, C-terminal domain I653_00080 SM00257 Lysin motif I653_00080 SM00636 I653_00080 I653_00095 SM00382 ATPases associated with a variety of cellular activities I653_00105 SM00493 I653_00105 I653_00175 SM00465 GIY-YIG type nucleases (URI domain) I653_00185 SM00966 SpoVT / AbrB like domain I653_00200 SM01208 I653_00200 I653_00205 SM00493 I653_00205 I653_00210 SM00650 Ribosomal RNA adenine dimethylases I653_00255 SM01400 I653_00255 I653_00275 SM00487 DEAD-like helicases superfamily I653_00275 SM00490 helicase superfamily c-terminal domain I653_00275 SM00982 I653_00275 I653_00275 SM01058 CarD-like/TRCF domain I653_00280 SM00966 SpoVT / AbrB like domain I653_00295 SM00363 S4 RNA-binding domain I653_00315 SM00316 Ribosomal protein S1-like RNA-binding domain I653_00320 SM00331 Sigma factor PP2C-like phosphatases I653_00320 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain I653_00330 SM00220 Serine/Threonine protein kinases, catalytic domain I653_00335 SM00977 TilS substrate C-terminal domain I653_00345 SM00382 ATPases associated with a variety of cellular activities I653_00390 SM00905 Dihydroneopterin aldolase I653_00400 SM00530 Helix-turn-helix XRE-family like proteins I653_00430 SM00382 ATPases associated with a variety of cellular activities I653_00430 SM01086 C-terminal, D2-small domain, of ClpB protein I653_00435 SM00382 ATPases associated with a variety of cellular activities I653_00445 SM00670 Large family of predicted nucleotide-binding domains I653_00475 SM00840 I653_00475 I653_00480 SM00535 Ribonuclease III family I653_00485 SM00967 RNA 2'-O ribose methyltransferase substrate binding I653_00510 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. I653_00510 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. I653_00515 SM00649 Ribosomal protein L11/L12 I653_00545 SM00663 RNA polymerase I subunit A N-terminus I653_00565 SM00838 Elongation factor G C-terminus I653_00565 SM00889 Elongation factor G, domain IV I653_00580 SM01403 I653_00580 I653_00600 SM01382 I653_00600 I653_00600 SM01383 I653_00600 I653_00615 SM00322 K homology RNA-binding domain I653_00635 SM01374 I653_00635 I653_00640 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. I653_00705 SM00316 Ribosomal protein S1-like RNA-binding domain I653_00725 SM00662 RNA polymerases D I653_00735 SM00382 ATPases associated with a variety of cellular activities I653_00740 SM00382 ATPases associated with a variety of cellular activities I653_00775 SM00646 I653_00775 I653_00790 SM01251 I653_00790 I653_00830 SM00342 helix_turn_helix, arabinose operon control protein I653_00915 SM00014 Acid phosphatase homologues I653_00945 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor I653_00970 SM00448 cheY-homologous receiver domain I653_00970 SM00862 Transcriptional regulatory protein, C terminal I653_00975 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain I653_00975 SM00388 His Kinase A (phosphoacceptor) domain I653_01050 SM00347 helix_turn_helix multiple antibiotic resistance protein I653_01070 SM00342 helix_turn_helix, arabinose operon control protein I653_01130 SM00450 Rhodanese Homology Domain I653_01150 SM00345 helix_turn_helix gluconate operon transcriptional repressor I653_01150 SM00866 I653_01150 I653_01190 SM00387 Histidine kinase-like ATPases I653_01195 SM00448 cheY-homologous receiver domain I653_01200 SM01130 I653_01200 I653_01215 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain I653_01220 SM00345 helix_turn_helix gluconate operon transcriptional repressor I653_01220 SM00895 I653_01220 I653_01225 SM00858 I653_01225 I653_01245 SM00448 cheY-homologous receiver domain I653_01245 SM00862 Transcriptional regulatory protein, C terminal I653_01250 SM00387 Histidine kinase-like ATPases I653_01250 SM00388 His Kinase A (phosphoacceptor) domain I653_01255 SM00382 ATPases associated with a variety of cellular activities I653_01280 SM00327 von Willebrand factor (vWF) type A domain I653_01325 SM00870 I653_01325 I653_01345 SM00387 Histidine kinase-like ATPases I653_01350 SM00448 cheY-homologous receiver domain I653_01350 SM00850 LytTr DNA-binding domain I653_01355 SM00382 ATPases associated with a variety of cellular activities I653_01390 SM00028 Tetratricopeptide repeats I653_01400 SM00642 Alpha-amylase domain I653_01410 SM00382 ATPases associated with a variety of cellular activities I653_01465 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor I653_01470 SM00116 Domain in cystathionine beta-synthase and other proteins. I653_01470 SM00382 ATPases associated with a variety of cellular activities I653_01500 SM00632 I653_01500 I653_01500 SM00642 Alpha-amylase domain I653_01520 SM00347 helix_turn_helix multiple antibiotic resistance protein I653_01640 SM00926 Molybdopterin oxidoreductase Fe4S4 domain I653_01670 SM00833 Cobalamin synthesis protein cobW C-terminal domain I653_01680 SM00062 Bacterial periplasmic substrate-binding proteins I653_01720 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). I653_01720 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain I653_01730 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family I653_01770 SM00823 Phosphopantetheine attachment site I653_01795 SM00345 helix_turn_helix gluconate operon transcriptional repressor I653_01810 SM00382 ATPases associated with a variety of cellular activities I653_01820 SM00062 Bacterial periplasmic substrate-binding proteins I653_01860 SM00710 Parallel beta-helix repeats I653_01860 SM00722 Domain present in carbohydrate binding proteins and sugar hydrolses I653_01885 SM00382 ATPases associated with a variety of cellular activities I653_01895 SM00448 cheY-homologous receiver domain I653_01895 SM00862 Transcriptional regulatory protein, C terminal I653_01900 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain I653_01900 SM00387 Histidine kinase-like ATPases I653_01900 SM00388 His Kinase A (phosphoacceptor) domain I653_01905 SM00028 Tetratricopeptide repeats I653_01940 SM00382 ATPases associated with a variety of cellular activities I653_01970 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor I653_01975 SM00345 helix_turn_helix gluconate operon transcriptional repressor I653_02015 SM00420 helix_turn_helix, Deoxyribose operon repressor I653_02040 SM01329 I653_02040 I653_02085 SM00796 Allophanate hydrolase subunit 1 I653_02090 SM00797 Allophanate hydrolase subunit 2 I653_02095 SM00346 helix_turn_helix isocitrate lyase regulation I653_02170 SM00344 helix_turn_helix ASNC type I653_02175 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain I653_02175 SM00437 Bacterial DNA topoisomerase I DNA-binding domain I653_02175 SM00493 I653_02175 I653_02185 SM00267 diguanylate cyclase I653_02270 SM00091 PAS domain I653_02270 SM00387 Histidine kinase-like ATPases I653_02275 SM00448 cheY-homologous receiver domain I653_02295 SM00382 ATPases associated with a variety of cellular activities I653_02345 SM00487 DEAD-like helicases superfamily I653_02345 SM00490 helicase superfamily c-terminal domain I653_02375 SM01005 Alanine racemase, C-terminal domain I653_02400 SM00387 Histidine kinase-like ATPases I653_02405 SM00331 Sigma factor PP2C-like phosphatases I653_02425 SM00331 Sigma factor PP2C-like phosphatases I653_02425 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain I653_02440 SM00347 helix_turn_helix multiple antibiotic resistance protein I653_02445 SM00316 Ribosomal protein S1-like RNA-binding domain I653_02445 SM00732 Likely ribonuclease with RNase H fold. I653_02455 SM00731 SprT homologues. I653_02465 SM00220 Serine/Threonine protein kinases, catalytic domain I653_02465 SM01260 I653_02465 I653_02470 SM00220 Serine/Threonine protein kinases, catalytic domain I653_02470 SM01260 I653_02470 I653_02475 SM00382 ATPases associated with a variety of cellular activities I653_02495 SM00530 Helix-turn-helix XRE-family like proteins I653_02510 SM00357 Cold shock protein domain I653_02515 SM01058 CarD-like/TRCF domain I653_02520 SM00342 helix_turn_helix, arabinose operon control protein I653_02530 SM00342 helix_turn_helix, arabinose operon control protein I653_02530 SM00871 Bacterial transcription activator, effector binding domain I653_02535 SM00345 helix_turn_helix gluconate operon transcriptional repressor I653_02565 SM00345 helix_turn_helix gluconate operon transcriptional repressor I653_02615 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor I653_02650 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain I653_02650 SM00387 Histidine kinase-like ATPases I653_02650 SM00388 His Kinase A (phosphoacceptor) domain I653_02655 SM00448 cheY-homologous receiver domain I653_02655 SM00862 Transcriptional regulatory protein, C terminal I653_02665 SM00345 helix_turn_helix gluconate operon transcriptional repressor I653_02675 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor I653_02695 SM00387 Histidine kinase-like ATPases I653_02700 SM00421 helix_turn_helix, Lux Regulon I653_02700 SM00448 cheY-homologous receiver domain I653_02720 SM00422 helix_turn_helix, mercury resistance I653_02720 SM00871 Bacterial transcription activator, effector binding domain I653_02820 SM00382 ATPases associated with a variety of cellular activities I653_02835 SM00347 helix_turn_helix multiple antibiotic resistance protein I653_02850 SM00347 helix_turn_helix multiple antibiotic resistance protein I653_02850 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor I653_02865 SM00345 helix_turn_helix gluconate operon transcriptional repressor I653_02865 SM00895 I653_02865 I653_02870 SM00257 Lysin motif I653_02870 SM00636 I653_02870 I653_02885 SM00098 Alkaline phosphatase homologues I653_02905 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. I653_02940 SM00345 helix_turn_helix gluconate operon transcriptional repressor I653_02940 SM00866 I653_02940 I653_02995 SM00382 ATPases associated with a variety of cellular activities I653_03005 SM00881 CoA binding domain I653_03030 SM00883 Chaperonin 10 Kd subunit I653_03045 SM00028 Tetratricopeptide repeats I653_03050 SM00829 Enoylreductase I653_03095 SM00829 Enoylreductase I653_03155 SM00460 Transglutaminase/protease-like homologues I653_03200 SM01001 AIR carboxylase I653_03210 SM00998 Adenylosuccinate lyase C-terminus I653_03225 SM01211 I653_03225 I653_03250 SM00798 AICARFT/IMPCHase bienzyme I653_03250 SM00851 MGS-like domain I653_03255 SM01209 I653_03255 I653_03255 SM01210 I653_03255 I653_03260 SM00344 helix_turn_helix ASNC type I653_03305 SM00278 Helix-hairpin-helix DNA-binding motif class 1 I653_03305 SM00292 breast cancer carboxy-terminal domain I653_03305 SM00532 Ligase N family I653_03340 SM00845 GatB domain I653_03355 SM00046 Diacylglycerol kinase catalytic domain (presumed) I653_03445 SM00028 Tetratricopeptide repeats I653_03510 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain I653_03510 SM00387 Histidine kinase-like ATPases I653_03515 SM00342 helix_turn_helix, arabinose operon control protein I653_03515 SM00448 cheY-homologous receiver domain I653_03540 SM00342 helix_turn_helix, arabinose operon control protein I653_03705 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). I653_03710 SM00382 ATPases associated with a variety of cellular activities I653_03720 SM00422 helix_turn_helix, mercury resistance I653_03740 SM00382 ATPases associated with a variety of cellular activities I653_03745 SM00487 DEAD-like helicases superfamily I653_03745 SM00490 helicase superfamily c-terminal domain I653_03755 SM00829 Enoylreductase I653_03760 SM00382 ATPases associated with a variety of cellular activities I653_03790 SM00656 I653_03790 I653_03800 SM00387 Histidine kinase-like ATPases I653_03805 SM00448 cheY-homologous receiver domain I653_03825 SM00849 Metallo-beta-lactamase superfamily I653_03910 SM00642 Alpha-amylase domain I653_03915 SM00345 helix_turn_helix gluconate operon transcriptional repressor I653_03915 SM00866 I653_03915 I653_03945 SM00226 Low molecular weight phosphatase family I653_04015 SM00478 endonuclease III I653_04050 SM00861 Transketolase, pyrimidine binding domain I653_04065 SM00382 ATPases associated with a variety of cellular activities I653_04115 SM00382 ATPases associated with a variety of cellular activities I653_04120 SM00382 ATPases associated with a variety of cellular activities I653_04135 SM00387 Histidine kinase-like ATPases I653_04140 SM00421 helix_turn_helix, Lux Regulon I653_04140 SM00448 cheY-homologous receiver domain I653_04145 SM00382 ATPases associated with a variety of cellular activities I653_04190 SM00382 ATPases associated with a variety of cellular activities I653_04220 SM00347 helix_turn_helix multiple antibiotic resistance protein I653_04295 SM00287 Bacterial SH3 domain homologues I653_04325 SM00478 endonuclease III I653_04325 SM00525 I653_04325 I653_04355 SM00382 ATPases associated with a variety of cellular activities I653_04430 SM01060 I653_04430 I653_04435 SM00382 ATPases associated with a variety of cellular activities I653_04440 SM00062 Bacterial periplasmic substrate-binding proteins I653_04475 SM00530 Helix-turn-helix XRE-family like proteins I653_04485 SM00567 E-Z type HEAT repeats I653_04520 SM00763 PrkA AAA domain I653_04530 SM00347 helix_turn_helix multiple antibiotic resistance protein I653_04560 SM00345 helix_turn_helix gluconate operon transcriptional repressor I653_04565 SM00382 ATPases associated with a variety of cellular activities I653_04570 SM00382 ATPases associated with a variety of cellular activities I653_04580 SM00357 Cold shock protein domain I653_04590 SM00267 diguanylate cyclase I653_04620 SM00318 Staphylococcal nuclease homologues I653_04630 SM00363 S4 RNA-binding domain I653_04640 SM00116 Domain in cystathionine beta-synthase and other proteins. I653_04685 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. I653_04685 SM00387 Histidine kinase-like ATPases I653_04690 SM00421 helix_turn_helix, Lux Regulon I653_04690 SM00448 cheY-homologous receiver domain I653_04710 SM00257 Lysin motif I653_04740 SM00098 Alkaline phosphatase homologues I653_04745 SM00257 Lysin motif I653_04780 SM00345 helix_turn_helix gluconate operon transcriptional repressor I653_04810 SM00563 Phosphate acyltransferases I653_04815 SM01091 Transporter associated domain I653_04820 SM00422 helix_turn_helix, mercury resistance I653_04830 SM01091 Transporter associated domain I653_04890 SM00382 ATPases associated with a variety of cellular activities I653_04895 SM00382 ATPases associated with a variety of cellular activities I653_04945 SM00729 Elongator protein 3, MiaB family, Radical SAM I653_04975 SM00382 ATPases associated with a variety of cellular activities I653_04995 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. I653_05035 SM00347 helix_turn_helix multiple antibiotic resistance protein I653_05065 SM00382 ATPases associated with a variety of cellular activities I653_05150 SM01022 I653_05150 I653_05165 SM00849 Metallo-beta-lactamase superfamily I653_05220 SM00829 Enoylreductase I653_05230 SM00855 Phosphoglycerate mutase family I653_05250 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). I653_05265 SM00914 I653_05265 I653_05280 SM00894 Excalibur calcium-binding domain I653_05315 SM00347 helix_turn_helix multiple antibiotic resistance protein I653_05340 SM00354 helix_turn _helix lactose operon repressor I653_05475 SM00342 helix_turn_helix, arabinose operon control protein I653_05480 SM00354 helix_turn _helix lactose operon repressor I653_05505 SM00345 helix_turn_helix gluconate operon transcriptional repressor I653_05550 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain I653_05585 SM00316 Ribosomal protein S1-like RNA-binding domain I653_05595 SM00752 Horizontally Transferred TransMembrane Domain I653_05680 SM00859 Semialdehyde dehydrogenase, NAD binding domain I653_05700 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain I653_05705 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain I653_05755 SM00825 Beta-ketoacyl synthase I653_05765 SM00382 ATPases associated with a variety of cellular activities I653_05770 SM00382 ATPases associated with a variety of cellular activities I653_05820 SM00382 ATPases associated with a variety of cellular activities I653_05825 SM00382 ATPases associated with a variety of cellular activities I653_05885 SM01118 I653_05885 I653_05895 SM00954 Region found in RelA / SpoT proteins I653_06200 SM00926 Molybdopterin oxidoreductase Fe4S4 domain I653_06200 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region I653_06250 SM00382 ATPases associated with a variety of cellular activities I653_06260 SM00835 Cupin I653_06290 SM00829 Enoylreductase I653_06310 SM00354 helix_turn _helix lactose operon repressor I653_06320 SM00858 I653_06320 I653_06335 SM00382 ATPases associated with a variety of cellular activities I653_06340 SM00028 Tetratricopeptide repeats I653_06355 SM00257 Lysin motif I653_06355 SM00644 I653_06355 I653_06380 SM00530 Helix-turn-helix XRE-family like proteins I653_06395 SM00382 ATPases associated with a variety of cellular activities I653_06500 SM00257 Lysin motif I653_06560 SM00257 Lysin motif I653_06560 SM00644 I653_06560 I653_06610 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. I653_06635 SM00382 ATPases associated with a variety of cellular activities I653_06650 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain I653_06660 SM00382 ATPases associated with a variety of cellular activities I653_06720 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase I653_06735 SM00347 helix_turn_helix multiple antibiotic resistance protein I653_06750 SM00855 Phosphoglycerate mutase family I653_06775 SM00382 ATPases associated with a variety of cellular activities I653_06790 SM00448 cheY-homologous receiver domain I653_06790 SM00862 Transcriptional regulatory protein, C terminal I653_06795 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain I653_06795 SM00387 Histidine kinase-like ATPases I653_06795 SM00388 His Kinase A (phosphoacceptor) domain I653_06820 SM00116 Domain in cystathionine beta-synthase and other proteins. I653_06820 SM00924 MgtE intracellular N domain I653_06825 SM00422 helix_turn_helix, mercury resistance I653_06840 SM00347 helix_turn_helix multiple antibiotic resistance protein I653_06875 SM00559 Ku70 and Ku80 are 70kDa and 80kDa subunits of the Lupus Ku autoantigen I653_06880 SM00052 Putative diguanylate phosphodiesterase I653_06880 SM00267 diguanylate cyclase I653_06940 SM00091 PAS domain I653_06940 SM00387 Histidine kinase-like ATPases I653_06940 SM00388 His Kinase A (phosphoacceptor) domain I653_06985 SM01007 Class II Aldolase and Adducin N-terminal domain I653_07010 SM00387 Histidine kinase-like ATPases I653_07010 SM00388 His Kinase A (phosphoacceptor) domain I653_07015 SM00347 helix_turn_helix multiple antibiotic resistance protein I653_07035 SM00382 ATPases associated with a variety of cellular activities I653_07035 SM01086 C-terminal, D2-small domain, of ClpB protein I653_07065 SM00257 Lysin motif I653_07070 SM00257 Lysin motif I653_07075 SM00636 I653_07075 I653_07130 SM00354 helix_turn _helix lactose operon repressor I653_07135 SM01061 CAT RNA binding domain I653_07170 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). I653_07170 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain I653_07190 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) I653_07190 SM00091 PAS domain I653_07190 SM00387 Histidine kinase-like ATPases I653_07190 SM00388 His Kinase A (phosphoacceptor) domain I653_07205 SM00260 Two component signalling adaptor domain I653_07205 SM00448 cheY-homologous receiver domain I653_07220 SM00257 Lysin motif I653_07235 SM00052 Putative diguanylate phosphodiesterase I653_07330 SM00852 Probable molybdopterin binding domain I653_07350 SM00382 ATPases associated with a variety of cellular activities I653_07355 SM00382 ATPases associated with a variety of cellular activities I653_07370 SM00382 ATPases associated with a variety of cellular activities I653_07375 SM01066 Carbohydrate binding domain I653_07380 SM00420 helix_turn_helix, Deoxyribose operon repressor I653_07380 SM01134 I653_07380 I653_07405 SM00382 ATPases associated with a variety of cellular activities I653_07435 SM00966 SpoVT / AbrB like domain I653_07440 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) I653_07440 SM00091 PAS domain I653_07440 SM00387 Histidine kinase-like ATPases I653_07440 SM00388 His Kinase A (phosphoacceptor) domain I653_07460 SM00849 Metallo-beta-lactamase superfamily I653_07495 SM00861 Transketolase, pyrimidine binding domain I653_07590 SM00838 Elongation factor G C-terminus I653_07610 SM00670 Large family of predicted nucleotide-binding domains I653_07635 SM00878 Biotin carboxylase C-terminal domain I653_07680 SM00116 Domain in cystathionine beta-synthase and other proteins. I653_07730 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. I653_07795 SM00740 I653_07795 I653_07800 SM00740 I653_07800 I653_07865 SM00842 Cell division protein FtsA I653_07870 SM00864 Tubulin/FtsZ family, GTPase domain I653_07870 SM00865 Tubulin/FtsZ family, C-terminal domain I653_07895 SM00382 ATPases associated with a variety of cellular activities I653_07930 SM00363 S4 RNA-binding domain I653_07955 SM00363 S4 RNA-binding domain I653_07980 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain I653_07985 SM00851 MGS-like domain I653_07985 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain I653_07985 SM01209 I653_07985 I653_08000 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family I653_08050 SM00831 Cation transporter/ATPase, N-terminus I653_08065 SM00072 Guanylate kinase homologues. I653_08070 SM01409 I653_08070 I653_08080 SM00487 DEAD-like helicases superfamily I653_08080 SM00490 helicase superfamily c-terminal domain I653_08105 SM00331 Sigma factor PP2C-like phosphatases I653_08105 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain I653_08110 SM00220 Serine/Threonine protein kinases, catalytic domain I653_08110 SM00740 I653_08110 I653_08125 SM00983 Thiamin pyrophosphokinase, vitamin B1 binding domain I653_08145 SM01120 I653_08145 I653_08145 SM01121 I653_08145 I653_08160 SM00487 DEAD-like helicases superfamily I653_08160 SM00490 helicase superfamily c-terminal domain I653_08175 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. I653_08180 SM00822 I653_08180 I653_08190 SM00358 Double-stranded RNA binding motif I653_08190 SM00535 Ribonuclease III family I653_08195 SM00968 SMC proteins Flexible Hinge Domain I653_08200 SM00382 ATPases associated with a variety of cellular activities I653_08200 SM00962 SRP54-type protein, GTPase domain I653_08200 SM00963 SRP54-type protein, helical bundle domain I653_08215 SM00382 ATPases associated with a variety of cellular activities I653_08215 SM00962 SRP54-type protein, GTPase domain I653_08215 SM00963 SRP54-type protein, helical bundle domain I653_08275 SM00881 CoA binding domain I653_08285 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain I653_08285 SM00437 Bacterial DNA topoisomerase I DNA-binding domain I653_08285 SM00493 I653_08285 I653_08305 SM00382 ATPases associated with a variety of cellular activities I653_08305 SM01086 C-terminal, D2-small domain, of ClpB protein I653_08345 SM00382 ATPases associated with a variety of cellular activities I653_08395 SM00448 cheY-homologous receiver domain I653_08430 SM00962 SRP54-type protein, GTPase domain I653_08440 SM00448 cheY-homologous receiver domain I653_08445 SM00073 Histidine Phosphotransfer domain I653_08445 SM00260 Two component signalling adaptor domain I653_08445 SM00387 Histidine kinase-like ATPases I653_08445 SM01231 I653_08445 I653_08450 SM00260 Two component signalling adaptor domain I653_08510 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. I653_08520 SM00479 I653_08520 I653_08520 SM00481 DNA polymerase alpha chain like domain I653_08530 SM00316 Ribosomal protein S1-like RNA-binding domain I653_08530 SM00322 K homology RNA-binding domain I653_08565 SM00904 Riboflavin kinase I653_08570 SM01387 I653_08570 I653_08575 SM00316 Ribosomal protein S1-like RNA-binding domain I653_08575 SM00322 K homology RNA-binding domain I653_08605 SM00859 Semialdehyde dehydrogenase, NAD binding domain I653_08615 SM01130 I653_08615 I653_08620 SM00849 Metallo-beta-lactamase superfamily I653_08635 SM00382 ATPases associated with a variety of cellular activities I653_08635 SM00843 I653_08635 I653_08640 SM00345 helix_turn_helix gluconate operon transcriptional repressor I653_08640 SM00866 I653_08640 I653_08675 SM00530 Helix-turn-helix XRE-family like proteins I653_08685 SM00852 Probable molybdopterin binding domain I653_08690 SM00382 ATPases associated with a variety of cellular activities I653_08700 SM00322 K homology RNA-binding domain I653_08700 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. I653_08715 SM00829 Enoylreductase I653_08725 SM00729 Elongator protein 3, MiaB family, Radical SAM I653_08740 SM00533 DNA-binding domain of DNA mismatch repair MUTS family I653_08740 SM00534 ATPase domain of DNA mismatch repair MUTS family I653_08745 SM00853 MutL C terminal dimerisation domain I653_08745 SM01340 I653_08745 I653_08765 SM00849 Metallo-beta-lactamase superfamily I653_08775 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. I653_08780 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. I653_08785 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. I653_08795 SM00825 Beta-ketoacyl synthase I653_08815 SM00822 I653_08815 I653_08815 SM00823 Phosphopantetheine attachment site I653_08815 SM00825 Beta-ketoacyl synthase I653_08815 SM00826 I653_08815 I653_08815 SM01294 I653_08815 I653_08830 SM00822 I653_08830 I653_08830 SM00823 Phosphopantetheine attachment site I653_08830 SM00825 Beta-ketoacyl synthase I653_08830 SM00826 I653_08830 I653_08830 SM01294 I653_08830 I653_08835 SM00822 I653_08835 I653_08835 SM00823 Phosphopantetheine attachment site I653_08835 SM00825 Beta-ketoacyl synthase I653_08835 SM00826 I653_08835 I653_08835 SM01294 I653_08835 I653_08840 SM00823 Phosphopantetheine attachment site I653_08840 SM00825 Beta-ketoacyl synthase I653_08840 SM01294 I653_08840 I653_08855 SM00849 Metallo-beta-lactamase superfamily I653_08940 SM00646 I653_08940 I653_08945 SM00382 ATPases associated with a variety of cellular activities I653_08965 SM00422 helix_turn_helix, mercury resistance I653_08970 SM01230 I653_08970 I653_09030 SM00860 SMI1 / KNR4 family I653_09115 SM00318 Staphylococcal nuclease homologues I653_09125 SM01005 Alanine racemase, C-terminal domain I653_09260 SM00257 Lysin motif I653_09265 SM00857 Resolvase, N terminal domain I653_09275 SM00861 Transketolase, pyrimidine binding domain I653_09300 SM00448 cheY-homologous receiver domain I653_09370 SM01207 I653_09370 I653_09380 SM00881 CoA binding domain I653_09385 SM00387 Histidine kinase-like ATPases I653_09385 SM00433 TopoisomeraseII I653_09390 SM00434 DNA Topoisomerase IV I653_09410 SM01067 Cellulose binding domain I653_09430 SM00606 Cellulose Binding Domain Type IV I653_09480 SM00878 Biotin carboxylase C-terminal domain I653_09510 SM00823 Phosphopantetheine attachment site I653_09510 SM00824 Thioesterase I653_09515 SM00823 Phosphopantetheine attachment site I653_09535 SM00823 Phosphopantetheine attachment site I653_09540 SM00823 Phosphopantetheine attachment site I653_09585 SM00829 Enoylreductase I653_09605 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase I653_09620 SM00822 I653_09620 I653_09660 SM00926 Molybdopterin oxidoreductase Fe4S4 domain I653_09685 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). I653_09685 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain I653_09705 SM00656 I653_09705 I653_09720 SM00835 Cupin I653_09750 SM00530 Helix-turn-helix XRE-family like proteins I653_09830 SM00860 SMI1 / KNR4 family I653_09840 SM00860 SMI1 / KNR4 family I653_09855 SM00342 helix_turn_helix, arabinose operon control protein I653_09870 SM00849 Metallo-beta-lactamase superfamily I653_09875 SM00871 Bacterial transcription activator, effector binding domain I653_09890 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor I653_09930 SM00421 helix_turn_helix, Lux Regulon I653_09930 SM00448 cheY-homologous receiver domain I653_09935 SM00257 Lysin motif I653_09940 SM00341 Helicase and RNase D C-terminal I653_09940 SM00487 DEAD-like helicases superfamily I653_09940 SM00490 helicase superfamily c-terminal domain I653_09940 SM00956 I653_09940 I653_10025 SM00861 Transketolase, pyrimidine binding domain I653_10030 SM00327 von Willebrand factor (vWF) type A domain I653_10035 SM00382 ATPases associated with a variety of cellular activities I653_10045 SM00257 Lysin motif I653_10150 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. I653_10150 SM00245 tail specific protease I653_10185 SM00014 Acid phosphatase homologues I653_10230 SM00882 Coenzyme A transferase I653_10235 SM00882 Coenzyme A transferase I653_10300 SM00347 helix_turn_helix multiple antibiotic resistance protein I653_10340 SM00382 ATPases associated with a variety of cellular activities I653_10400 SM00567 E-Z type HEAT repeats I653_10400 SM00932 Scaffold protein Nfu/NifU N terminal I653_10405 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. I653_10425 SM00357 Cold shock protein domain I653_10465 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs I653_10465 SM00475 5'-3' exonuclease I653_10530 SM00354 helix_turn _helix lactose operon repressor I653_10545 SM00491 I653_10545 I653_10560 SM00981 I653_10560 I653_10590 SM00487 DEAD-like helicases superfamily I653_10590 SM00490 helicase superfamily c-terminal domain I653_10650 SM00478 endonuclease III I653_10650 SM00525 I653_10650 I653_10680 SM00479 I653_10680 I653_10680 SM00487 DEAD-like helicases superfamily I653_10680 SM00491 I653_10680 I653_10720 SM00851 MGS-like domain I653_10770 SM00914 I653_10770 I653_10775 SM00028 Tetratricopeptide repeats I653_10840 SM00138 Methyltransferase, chemotaxis proteins I653_10850 SM00562 I653_10850 I653_10880 SM00411 bacterial (prokaryotic) histone like domain I653_10930 SM01240 I653_10930 I653_10935 SM00316 Ribosomal protein S1-like RNA-binding domain I653_10975 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase I653_10995 SM00257 Lysin motif I653_11005 SM00487 DEAD-like helicases superfamily I653_11005 SM00490 helicase superfamily c-terminal domain I653_11050 SM00091 PAS domain I653_11050 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain I653_11050 SM00387 Histidine kinase-like ATPases I653_11050 SM00388 His Kinase A (phosphoacceptor) domain I653_11055 SM00448 cheY-homologous receiver domain I653_11055 SM00862 Transcriptional regulatory protein, C terminal I653_11075 SM00363 S4 RNA-binding domain I653_11215 SM00387 Histidine kinase-like ATPases I653_11225 SM00936 Penicillin-binding protein 5, C-terminal domain I653_11265 SM00919 Malic enzyme, NAD binding domain I653_11265 SM01274 I653_11265 I653_11280 SM00870 I653_11280 I653_11285 SM00530 Helix-turn-helix XRE-family like proteins I653_11395 SM00849 Metallo-beta-lactamase superfamily I653_11425 SM00849 Metallo-beta-lactamase superfamily I653_11435 SM01350 I653_11435 I653_11490 SM00382 ATPases associated with a variety of cellular activities I653_11500 SM00062 Bacterial periplasmic substrate-binding proteins I653_11500 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. I653_11510 SM00046 Diacylglycerol kinase catalytic domain (presumed) I653_11520 SM00422 helix_turn_helix, mercury resistance I653_11530 SM00861 Transketolase, pyrimidine binding domain I653_11550 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase I653_11560 SM00091 PAS domain I653_11560 SM00382 ATPases associated with a variety of cellular activities I653_11605 SM00646 I653_11605 I653_11630 SM00448 cheY-homologous receiver domain I653_11635 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. I653_11650 SM00363 S4 RNA-binding domain I653_11655 SM00861 Transketolase, pyrimidine binding domain I653_11690 SM00878 Biotin carboxylase C-terminal domain I653_11735 SM00382 ATPases associated with a variety of cellular activities I653_11745 SM00841 Elongation factor P, C-terminal I653_11745 SM01185 I653_11745 I653_11780 SM00529 Helix-turn-helix diphteria tox regulatory element I653_11790 SM00450 Rhodanese Homology Domain I653_11810 SM00487 DEAD-like helicases superfamily I653_11810 SM00490 helicase superfamily c-terminal domain I653_11825 SM00530 Helix-turn-helix XRE-family like proteins I653_11885 SM00382 ATPases associated with a variety of cellular activities I653_11895 SM01091 Transporter associated domain I653_11915 SM00849 Metallo-beta-lactamase superfamily I653_11935 SM00631 I653_11935 I653_11955 SM00028 Tetratricopeptide repeats I653_11995 SM00382 ATPases associated with a variety of cellular activities I653_12000 SM00382 ATPases associated with a variety of cellular activities I653_12045 SM00257 Lysin motif I653_12080 SM00518 AP endonuclease family 2 I653_12085 SM00487 DEAD-like helicases superfamily I653_12085 SM00490 helicase superfamily c-terminal domain I653_12120 SM00400 zinc finger I653_12120 SM00493 I653_12120 I653_12135 SM00116 Domain in cystathionine beta-synthase and other proteins. I653_12180 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. I653_12235 SM00729 Elongator protein 3, MiaB family, Radical SAM I653_12250 SM00271 DnaJ molecular chaperone homology domain I653_12270 SM00729 Elongator protein 3, MiaB family, Radical SAM I653_12275 SM00838 Elongation factor G C-terminus I653_12310 SM00849 Metallo-beta-lactamase superfamily I653_12320 SM00278 Helix-hairpin-helix DNA-binding motif class 1 I653_12340 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. I653_12350 SM01103 I653_12350 I653_12385 SM00644 I653_12385 I653_12395 SM01350 I653_12395 I653_12435 SM00388 His Kinase A (phosphoacceptor) domain I653_12440 SM00448 cheY-homologous receiver domain I653_12440 SM00862 Transcriptional regulatory protein, C terminal I653_12465 SM00822 I653_12465 I653_12475 SM00860 SMI1 / KNR4 family I653_12550 SM00347 helix_turn_helix multiple antibiotic resistance protein I653_12555 SM00450 Rhodanese Homology Domain I653_12565 SM00028 Tetratricopeptide repeats I653_12595 SM00422 helix_turn_helix, mercury resistance I653_12610 SM01091 Transporter associated domain I653_12670 SM00344 helix_turn_helix ASNC type I653_12765 SM00287 Bacterial SH3 domain homologues I653_12805 SM00422 helix_turn_helix, mercury resistance I653_12815 SM00829 Enoylreductase I653_12825 SM00640 Glycosyl hydrolases family 32 I653_12850 SM00382 ATPases associated with a variety of cellular activities I653_12925 SM00926 Molybdopterin oxidoreductase Fe4S4 domain I653_12925 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region I653_12955 SM00650 Ribosomal RNA adenine dimethylases I653_13010 SM00732 Likely ribonuclease with RNase H fold. I653_13020 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain I653_13030 SM00382 ATPases associated with a variety of cellular activities I653_13035 SM00062 Bacterial periplasmic substrate-binding proteins I653_13035 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. I653_13065 SM00382 ATPases associated with a variety of cellular activities I653_13070 SM00028 Tetratricopeptide repeats I653_13090 SM00382 ATPases associated with a variety of cellular activities I653_13120 SM00287 Bacterial SH3 domain homologues I653_13120 SM00646 I653_13120 I653_13130 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. I653_13130 SM00954 Region found in RelA / SpoT proteins I653_13180 SM01323 I653_13180 I653_13200 SM00382 ATPases associated with a variety of cellular activities I653_13205 SM00278 Helix-hairpin-helix DNA-binding motif class 1 I653_13260 SM00257 Lysin motif I653_13305 SM01317 I653_13305 I653_13405 SM00257 Lysin motif I653_13415 SM01004 Delta-aminolevulinic acid dehydratase I653_13450 SM00382 ATPases associated with a variety of cellular activities I653_13450 SM00464 Found in ATP-dependent protease La (LON) I653_13455 SM00382 ATPases associated with a variety of cellular activities I653_13460 SM00382 ATPases associated with a variety of cellular activities I653_13460 SM00994 ClpX C4-type zinc finger I653_13460 SM01086 C-terminal, D2-small domain, of ClpB protein I653_13485 SM01329 I653_13485 I653_13490 SM00917 LeuA allosteric (dimerisation) domain I653_13540 SM00909 Sporulation and spore germination I653_13550 SM00347 helix_turn_helix multiple antibiotic resistance protein I653_13555 SM00421 helix_turn_helix, Lux Regulon I653_13595 SM00465 GIY-YIG type nucleases (URI domain) I653_13605 SM00813 Alpha-L-arabinofuranosidase C-terminus I653_13610 SM00893 Electron transfer flavoprotein domain I653_13615 SM00893 Electron transfer flavoprotein domain I653_13640 SM00463 Small MutS-related domain I653_13640 SM00533 DNA-binding domain of DNA mismatch repair MUTS family I653_13640 SM00534 ATPase domain of DNA mismatch repair MUTS family I653_13645 SM00278 Helix-hairpin-helix DNA-binding motif class 1 I653_13645 SM00481 DNA polymerase alpha chain like domain I653_13645 SM00483 DNA polymerase X family I653_13665 SM00873 B3/4 domain I653_13665 SM00874 tRNA synthetase B5 domain I653_13665 SM00896 Ferredoxin-fold anticodon binding domain I653_13680 SM00967 RNA 2'-O ribose methyltransferase substrate binding I653_13715 SM00813 Alpha-L-arabinofuranosidase C-terminus I653_13745 SM01007 Class II Aldolase and Adducin N-terminal domain I653_13810 SM00448 cheY-homologous receiver domain I653_13810 SM00850 LytTr DNA-binding domain I653_13815 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. I653_13815 SM00387 Histidine kinase-like ATPases I653_13825 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain I653_13840 SM00382 ATPases associated with a variety of cellular activities I653_13860 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain I653_13890 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain I653_13890 SM01232 I653_13890 I653_13895 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs I653_13895 SM00474 3'-5' exonuclease I653_13895 SM00475 5'-3' exonuclease I653_13895 SM00482 DNA polymerase A domain I653_13900 SM00091 PAS domain I653_13900 SM00387 Histidine kinase-like ATPases I653_13900 SM00388 His Kinase A (phosphoacceptor) domain I653_13905 SM00448 cheY-homologous receiver domain I653_13905 SM00862 Transcriptional regulatory protein, C terminal I653_13915 SM01329 I653_13915 I653_13960 SM00919 Malic enzyme, NAD binding domain I653_13960 SM01274 I653_13960 I653_13965 SM00481 DNA polymerase alpha chain like domain I653_13995 SM00116 Domain in cystathionine beta-synthase and other proteins. I653_14010 SM00904 Riboflavin kinase I653_14030 SM00382 ATPases associated with a variety of cellular activities I653_14045 SM00062 Bacterial periplasmic substrate-binding proteins I653_14050 SM00062 Bacterial periplasmic substrate-binding proteins I653_14065 SM00849 Metallo-beta-lactamase superfamily I653_14090 SM00852 Probable molybdopterin binding domain I653_14155 SM00981 I653_14155 I653_14185 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. I653_14190 SM00267 diguanylate cyclase I653_14195 SM00363 S4 RNA-binding domain I653_14195 SM01390 I653_14195 I653_14205 SM00363 S4 RNA-binding domain I653_14220 SM00116 Domain in cystathionine beta-synthase and other proteins. I653_14240 SM00354 helix_turn _helix lactose operon repressor I653_14245 SM00830 Chorismate mutase type II I653_14270 SM00382 ATPases associated with a variety of cellular activities I653_14270 SM00843 I653_14270 I653_14305 SM00919 Malic enzyme, NAD binding domain I653_14305 SM01274 I653_14305 I653_14310 SM00849 Metallo-beta-lactamase superfamily I653_14330 SM00642 Alpha-amylase domain I653_14335 SM00046 Diacylglycerol kinase catalytic domain (presumed) I653_14370 SM00382 ATPases associated with a variety of cellular activities I653_14375 SM00420 helix_turn_helix, Deoxyribose operon repressor I653_14380 SM00363 S4 RNA-binding domain I653_14430 SM00342 helix_turn_helix, arabinose operon control protein I653_14455 SM00729 Elongator protein 3, MiaB family, Radical SAM I653_14455 SM00876 Biotin and Thiamin Synthesis associated domain I653_14485 SM00354 helix_turn _helix lactose operon repressor I653_14510 SM00450 Rhodanese Homology Domain I653_14525 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) I653_14525 SM00091 PAS domain I653_14550 SM00382 ATPases associated with a variety of cellular activities I653_14555 SM00387 Histidine kinase-like ATPases I653_14560 SM00448 cheY-homologous receiver domain I653_14560 SM00862 Transcriptional regulatory protein, C terminal I653_14570 SM00382 ATPases associated with a variety of cellular activities I653_14585 SM00382 ATPases associated with a variety of cellular activities I653_14590 SM00345 helix_turn_helix gluconate operon transcriptional repressor I653_14605 SM00729 Elongator protein 3, MiaB family, Radical SAM I653_14665 SM00382 ATPases associated with a variety of cellular activities I653_14705 SM01234 I653_14705 I653_14710 SM00947 Carbonic anhydrase I653_14745 SM00382 ATPases associated with a variety of cellular activities I653_14755 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain I653_14800 SM00984 UDP binding domain I653_14860 SM00642 Alpha-amylase domain I653_14890 SM00244 prohibitin homologues I653_14945 SM00047 Lysozyme subfamily 2 I653_14990 SM00420 helix_turn_helix, Deoxyribose operon repressor I653_14990 SM01134 I653_14990 I653_14995 SM01007 Class II Aldolase and Adducin N-terminal domain I653_15005 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). I653_15005 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain I653_15005 SM00319 Homologues of the ligand binding domain of Tar I653_15010 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). I653_15010 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain I653_15010 SM00319 Homologues of the ligand binding domain of Tar I653_15015 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). I653_15015 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain I653_15015 SM00319 Homologues of the ligand binding domain of Tar I653_15020 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). I653_15020 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain I653_15020 SM00319 Homologues of the ligand binding domain of Tar I653_15040 SM00642 Alpha-amylase domain I653_15045 SM00116 Domain in cystathionine beta-synthase and other proteins. I653_15045 SM01091 Transporter associated domain I653_15105 SM00316 Ribosomal protein S1-like RNA-binding domain I653_15115 SM00344 helix_turn_helix ASNC type I653_15135 SM00387 Histidine kinase-like ATPases I653_15135 SM00388 His Kinase A (phosphoacceptor) domain I653_15140 SM01298 I653_15140 I653_15145 SM00479 I653_15145 I653_15175 SM00091 PAS domain I653_15175 SM00387 Histidine kinase-like ATPases I653_15180 SM00448 cheY-homologous receiver domain I653_15190 SM00382 ATPases associated with a variety of cellular activities I653_15255 SM00421 helix_turn_helix, Lux Regulon I653_15255 SM00448 cheY-homologous receiver domain I653_15260 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. I653_15260 SM00387 Histidine kinase-like ATPases I653_15285 SM00052 Putative diguanylate phosphodiesterase I653_15330 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. I653_15380 SM01002 Alanine dehydrogenase/PNT, C-terminal domain I653_15380 SM01003 Alanine dehydrogenase/PNT, N-terminal domain I653_15390 SM00923 MbtH-like protein I653_15395 SM00823 Phosphopantetheine attachment site I653_15395 SM00824 Thioesterase I653_15480 SM01240 I653_15480 I653_15580 SM00729 Elongator protein 3, MiaB family, Radical SAM I653_15665 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain I653_15700 SM00382 ATPases associated with a variety of cellular activities I653_15705 SM00345 helix_turn_helix gluconate operon transcriptional repressor I653_15705 SM00866 I653_15705 I653_15735 SM00465 GIY-YIG type nucleases (URI domain) I653_15760 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor I653_15785 SM00382 ATPases associated with a variety of cellular activities I653_15810 SM00382 ATPases associated with a variety of cellular activities I653_15810 SM00930 I653_15810 I653_15825 SM00493 I653_15825 I653_15885 SM00347 helix_turn_helix multiple antibiotic resistance protein I653_15915 SM00382 ATPases associated with a variety of cellular activities I653_15940 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. I653_15945 SM00448 cheY-homologous receiver domain I653_15945 SM00862 Transcriptional regulatory protein, C terminal I653_15950 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain I653_15950 SM00387 Histidine kinase-like ATPases I653_15950 SM00388 His Kinase A (phosphoacceptor) domain I653_15990 SM00421 helix_turn_helix, Lux Regulon I653_15990 SM00448 cheY-homologous receiver domain I653_15995 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain I653_15995 SM00387 Histidine kinase-like ATPases I653_16040 SM00382 ATPases associated with a variety of cellular activities I653_16065 SM00387 Histidine kinase-like ATPases I653_16065 SM00388 His Kinase A (phosphoacceptor) domain I653_16070 SM00448 cheY-homologous receiver domain I653_16070 SM00862 Transcriptional regulatory protein, C terminal I653_16090 SM00835 Cupin I653_16105 SM00382 ATPases associated with a variety of cellular activities I653_16115 SM00382 ATPases associated with a variety of cellular activities I653_16280 SM00316 Ribosomal protein S1-like RNA-binding domain I653_16280 SM00357 Cold shock protein domain I653_16280 SM00955 I653_16280 I653_16300 SM00530 Helix-turn-helix XRE-family like proteins I653_16305 SM00530 Helix-turn-helix XRE-family like proteins I653_16310 SM00530 Helix-turn-helix XRE-family like proteins I653_16355 SM00116 Domain in cystathionine beta-synthase and other proteins. I653_16355 SM00382 ATPases associated with a variety of cellular activities I653_16380 SM00116 Domain in cystathionine beta-synthase and other proteins. I653_16380 SM00382 ATPases associated with a variety of cellular activities I653_16455 SM00984 UDP binding domain I653_16465 SM01192 I653_16465 I653_16465 SM01193 I653_16465 I653_16490 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain I653_16505 SM00345 helix_turn_helix gluconate operon transcriptional repressor I653_16530 SM00636 I653_16530 I653_16550 SM00421 helix_turn_helix, Lux Regulon I653_16550 SM00448 cheY-homologous receiver domain I653_16565 SM00382 ATPases associated with a variety of cellular activities I653_16575 SM00331 Sigma factor PP2C-like phosphatases I653_16605 SM00354 helix_turn _helix lactose operon repressor I653_16610 SM00345 helix_turn_helix gluconate operon transcriptional repressor I653_16610 SM00895 I653_16610 I653_16705 SM00530 Helix-turn-helix XRE-family like proteins I653_16755 SM00640 Glycosyl hydrolases family 32 I653_16790 SM00752 Horizontally Transferred TransMembrane Domain I653_16820 SM00642 Alpha-amylase domain I653_16850 SM00642 Alpha-amylase domain I653_16855 SM00354 helix_turn _helix lactose operon repressor I653_16875 SM00947 Carbonic anhydrase I653_16890 SM00382 ATPases associated with a variety of cellular activities I653_16895 SM00387 Histidine kinase-like ATPases I653_16900 SM00448 cheY-homologous receiver domain I653_16900 SM00862 Transcriptional regulatory protein, C terminal I653_16950 SM00028 Tetratricopeptide repeats I653_16955 SM00382 ATPases associated with a variety of cellular activities I653_17065 SM00345 helix_turn_helix gluconate operon transcriptional repressor I653_17065 SM00866 I653_17065 I653_17110 SM00382 ATPases associated with a variety of cellular activities I653_17115 SM00487 DEAD-like helicases superfamily I653_17115 SM00490 helicase superfamily c-terminal domain I653_17140 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. I653_17150 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. I653_17150 SM00245 tail specific protease I653_17160 SM00382 ATPases associated with a variety of cellular activities I653_17175 SM00937 I653_17175 I653_17180 SM00957 SecA DEAD-like domain I653_17180 SM00958 SecA preprotein cross-linking domain I653_17270 SM00487 DEAD-like helicases superfamily I653_17270 SM00490 helicase superfamily c-terminal domain I653_17280 SM00421 helix_turn_helix, Lux Regulon I653_17280 SM00448 cheY-homologous receiver domain I653_17285 SM00387 Histidine kinase-like ATPases I653_17325 SM00984 UDP binding domain I653_17350 SM00646 I653_17350 I653_17395 SM00382 ATPases associated with a variety of cellular activities I653_17465 SM00047 Lysozyme subfamily 2 I653_17465 SM00287 Bacterial SH3 domain homologues I653_17515 SM00854 Bacterial capsule synthesis protein PGA_cap I653_17530 SM00354 helix_turn _helix lactose operon repressor I653_17545 SM00382 ATPases associated with a variety of cellular activities I653_17560 SM00287 Bacterial SH3 domain homologues I653_17615 SM00903 Flavin reductase like domain I653_17630 SM00344 helix_turn_helix ASNC type I653_17680 SM00984 UDP binding domain I653_17710 SM00487 DEAD-like helicases superfamily I653_17710 SM00490 helicase superfamily c-terminal domain I653_17720 SM00420 helix_turn_helix, Deoxyribose operon repressor I653_17720 SM01134 I653_17720 I653_17750 SM00448 cheY-homologous receiver domain I653_17750 SM00862 Transcriptional regulatory protein, C terminal I653_17755 SM00387 Histidine kinase-like ATPases I653_17755 SM00388 His Kinase A (phosphoacceptor) domain I653_17755 SM00448 cheY-homologous receiver domain I653_17770 SM00028 Tetratricopeptide repeats I653_17795 SM00347 helix_turn_helix multiple antibiotic resistance protein I653_17805 SM00710 Parallel beta-helix repeats I653_17805 SM00722 Domain present in carbohydrate binding proteins and sugar hydrolses I653_17835 SM00938 Nitrogen regulatory protein P-II I653_17840 SM00014 Acid phosphatase homologues I653_17880 SM00155 Phospholipase D. Active site motifs. I653_17885 SM00422 helix_turn_helix, mercury resistance I653_17940 SM00028 Tetratricopeptide repeats I653_17945 SM00729 Elongator protein 3, MiaB family, Radical SAM I653_17960 SM00327 von Willebrand factor (vWF) type A domain I653_17970 SM00327 von Willebrand factor (vWF) type A domain I653_18005 SM00382 ATPases associated with a variety of cellular activities I653_18065 SM00226 Low molecular weight phosphatase family I653_18105 SM00937 I653_18105 I653_18125 SM00919 Malic enzyme, NAD binding domain I653_18125 SM01274 I653_18125 I653_18140 SM00357 Cold shock protein domain I653_18140 SM00382 ATPases associated with a variety of cellular activities I653_18140 SM00959 Rho termination factor, N-terminal domain I653_18170 SM00448 cheY-homologous receiver domain I653_18200 SM00155 Phospholipase D. Active site motifs. I653_18220 SM00382 ATPases associated with a variety of cellular activities I653_18225 SM00155 Phospholipase D. Active site motifs. I653_18245 SM00926 Molybdopterin oxidoreductase Fe4S4 domain I653_18260 SM00100 Cyclic nucleotide-monophosphate binding domain I653_18260 SM00419 helix_turn_helix, cAMP Regulatory protein I653_18270 SM00836 DALR anticodon binding domain I653_18270 SM01016 Arginyl tRNA synthetase N terminal dom I653_18285 SM00729 Elongator protein 3, MiaB family, Radical SAM I653_18335 SM00028 Tetratricopeptide repeats I653_18365 SM00382 ATPases associated with a variety of cellular activities I653_18405 SM00347 helix_turn_helix multiple antibiotic resistance protein I653_18410 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain I653_18440 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. I653_18540 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase I653_18580 SM00858 I653_18580 I653_18630 SM00986 Uracil DNA glycosylase superfamily I653_18630 SM00987 UreE urease accessory protein, C-terminal domain I653_18650 SM00640 Glycosyl hydrolases family 32 I653_18670 SM01061 CAT RNA binding domain I653_18820 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase I653_18855 SM01061 CAT RNA binding domain I653_18870 SM00347 helix_turn_helix multiple antibiotic resistance protein I653_18875 SM00363 S4 RNA-binding domain I653_18885 SM00954 Region found in RelA / SpoT proteins I653_18965 SM01060 I653_18965 I653_18980 SM00382 ATPases associated with a variety of cellular activities I653_19015 SM00382 ATPases associated with a variety of cellular activities I653_19020 SM00382 ATPases associated with a variety of cellular activities I653_19050 SM00382 ATPases associated with a variety of cellular activities I653_19100 SM00421 helix_turn_helix, Lux Regulon I653_19100 SM00448 cheY-homologous receiver domain I653_19135 SM00822 I653_19135 I653_19140 SM00882 Coenzyme A transferase I653_19145 SM00882 Coenzyme A transferase I653_19175 SM01060 I653_19175 I653_19190 SM01061 CAT RNA binding domain I653_19205 SM00487 DEAD-like helicases superfamily I653_19205 SM00490 helicase superfamily c-terminal domain I653_19310 SM00487 DEAD-like helicases superfamily I653_19310 SM00490 helicase superfamily c-terminal domain I653_19365 SM00941 Pyrimidine nucleoside phosphorylase C-terminal domain I653_19375 SM01133 I653_19375 I653_19405 SM00382 ATPases associated with a variety of cellular activities I653_19415 SM00062 Bacterial periplasmic substrate-binding proteins I653_19480 SM00382 ATPases associated with a variety of cellular activities I653_19485 SM00387 Histidine kinase-like ATPases I653_19490 SM00448 cheY-homologous receiver domain I653_19490 SM00862 Transcriptional regulatory protein, C terminal I653_19545 SM00420 helix_turn_helix, Deoxyribose operon repressor I653_19545 SM01134 I653_19545 I653_19570 SM00387 Histidine kinase-like ATPases I653_19600 SM00564 beta-propeller repeat I653_19635 SM00347 helix_turn_helix multiple antibiotic resistance protein I653_19660 SM00345 helix_turn_helix gluconate operon transcriptional repressor I653_19660 SM00895 I653_19660 I653_19675 SM01350 I653_19675 I653_19705 SM00345 helix_turn_helix gluconate operon transcriptional repressor I653_19705 SM00866 I653_19705 I653_19720 SM00382 ATPases associated with a variety of cellular activities I653_19730 SM00487 DEAD-like helicases superfamily I653_19820 SM00091 PAS domain I653_19820 SM00382 ATPases associated with a variety of cellular activities I653_19830 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. I653_19835 SM00849 Metallo-beta-lactamase superfamily I653_19850 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) I653_19850 SM00091 PAS domain I653_19850 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain I653_19850 SM00387 Histidine kinase-like ATPases I653_19850 SM00388 His Kinase A (phosphoacceptor) domain I653_19855 SM00448 cheY-homologous receiver domain I653_19855 SM00862 Transcriptional regulatory protein, C terminal I653_19860 SM00788 Adenylosuccinate synthetase I653_19870 SM00382 ATPases associated with a variety of cellular activities I653_19910 SM00267 diguanylate cyclase I653_19935 SM01131 I653_19935 I653_19955 SM00422 helix_turn_helix, mercury resistance I653_20015 SM00849 Metallo-beta-lactamase superfamily I653_20020 SM00347 helix_turn_helix multiple antibiotic resistance protein I653_20055 SM00226 Low molecular weight phosphatase family I653_20070 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor I653_20075 SM00530 Helix-turn-helix XRE-family like proteins I653_20080 SM00825 Beta-ketoacyl synthase I653_20100 SM01266 I653_20100 I653_20110 SM00354 helix_turn _helix lactose operon repressor I653_20140 SM00926 Molybdopterin oxidoreductase Fe4S4 domain I653_20160 SM00470 ParB-like nuclease domain I653_20175 SM00470 ParB-like nuclease domain I653_20185 SM01228 I653_20185 I653_20195 SM00322 K homology RNA-binding domain I653_20195 SM00393 Putative single-stranded nucleic acids-binding domain I653_20195 SM01245 I653_20195