Q433_00005 SM00382 ATPases associated with a variety of cellular activities Q433_00005 SM00760 Bacterial dnaA protein helix-turn-helix domain Q433_00010 SM00480 DNA polymerase III beta subunit Q433_00030 SM00387 Histidine kinase-like ATPases Q433_00030 SM00433 TopoisomeraseII Q433_00040 SM00434 DNA Topoisomerase IV Q433_00080 SM00936 Penicillin-binding protein 5, C-terminal domain Q433_00115 SM00257 Lysin motif Q433_00115 SM00636 Q433_00115 Q433_00135 SM00382 ATPases associated with a variety of cellular activities Q433_00145 SM00493 Q433_00145 Q433_00240 SM00465 GIY-YIG type nucleases (URI domain) Q433_00250 SM00966 SpoVT / AbrB like domain Q433_00270 SM01208 Q433_00270 Q433_00275 SM00493 Q433_00275 Q433_00280 SM00650 Ribosomal RNA adenine dimethylases Q433_00330 SM01400 Q433_00330 Q433_00350 SM00487 DEAD-like helicases superfamily Q433_00350 SM00490 helicase superfamily c-terminal domain Q433_00350 SM00982 Q433_00350 Q433_00350 SM01058 CarD-like/TRCF domain Q433_00355 SM00966 SpoVT / AbrB like domain Q433_00370 SM00363 S4 RNA-binding domain Q433_00390 SM00316 Ribosomal protein S1-like RNA-binding domain Q433_00405 SM00331 Sigma factor PP2C-like phosphatases Q433_00405 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain Q433_00415 SM00220 Serine/Threonine protein kinases, catalytic domain Q433_00420 SM00977 TilS substrate C-terminal domain Q433_00430 SM00382 ATPases associated with a variety of cellular activities Q433_00475 SM00905 Dihydroneopterin aldolase Q433_00600 SM00382 ATPases associated with a variety of cellular activities Q433_00600 SM01086 C-terminal, D2-small domain, of ClpB protein Q433_00605 SM00382 ATPases associated with a variety of cellular activities Q433_00615 SM00670 Large family of predicted nucleotide-binding domains Q433_00645 SM00840 Q433_00645 Q433_00650 SM00535 Ribonuclease III family Q433_00655 SM00967 RNA 2'-O ribose methyltransferase substrate binding Q433_00680 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. Q433_00680 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. Q433_00685 SM00649 Ribosomal protein L11/L12 Q433_00715 SM00663 RNA polymerase I subunit A N-terminus Q433_00740 SM00838 Elongation factor G C-terminus Q433_00740 SM00889 Elongation factor G, domain IV Q433_00760 SM01403 Q433_00760 Q433_00780 SM01382 Q433_00780 Q433_00780 SM01383 Q433_00780 Q433_00795 SM00322 K homology RNA-binding domain Q433_00815 SM01374 Q433_00815 Q433_00820 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. Q433_00885 SM00316 Ribosomal protein S1-like RNA-binding domain Q433_00905 SM00662 RNA polymerases D Q433_00915 SM00382 ATPases associated with a variety of cellular activities Q433_00920 SM00382 ATPases associated with a variety of cellular activities Q433_00955 SM00646 Q433_00955 Q433_00975 SM01251 Q433_00975 Q433_01040 SM00342 helix_turn_helix, arabinose operon control protein Q433_01155 SM00478 endonuclease III Q433_01160 SM00342 helix_turn_helix, arabinose operon control protein Q433_01205 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor Q433_01245 SM01260 Q433_01245 Q433_01255 SM00382 ATPases associated with a variety of cellular activities Q433_01265 SM00448 cheY-homologous receiver domain Q433_01265 SM00862 Transcriptional regulatory protein, C terminal Q433_01270 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Q433_01270 SM00388 His Kinase A (phosphoacceptor) domain Q433_01350 SM00347 helix_turn_helix multiple antibiotic resistance protein Q433_01375 SM00342 helix_turn_helix, arabinose operon control protein Q433_01425 SM00450 Rhodanese Homology Domain Q433_01490 SM00387 Histidine kinase-like ATPases Q433_01495 SM00448 cheY-homologous receiver domain Q433_01500 SM01130 Q433_01500 Q433_01515 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain Q433_01520 SM00345 helix_turn_helix gluconate operon transcriptional repressor Q433_01520 SM00895 Q433_01520 Q433_01525 SM00858 Q433_01525 Q433_01555 SM00448 cheY-homologous receiver domain Q433_01555 SM00862 Transcriptional regulatory protein, C terminal Q433_01560 SM00387 Histidine kinase-like ATPases Q433_01560 SM00388 His Kinase A (phosphoacceptor) domain Q433_01565 SM00382 ATPases associated with a variety of cellular activities Q433_01595 SM00327 von Willebrand factor (vWF) type A domain Q433_01645 SM00870 Q433_01645 Q433_01665 SM00387 Histidine kinase-like ATPases Q433_01670 SM00448 cheY-homologous receiver domain Q433_01670 SM00850 LytTr DNA-binding domain Q433_01675 SM00382 ATPases associated with a variety of cellular activities Q433_01715 SM00028 Tetratricopeptide repeats Q433_01725 SM00642 Alpha-amylase domain Q433_01735 SM00382 ATPases associated with a variety of cellular activities Q433_01790 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor Q433_01800 SM00116 Domain in cystathionine beta-synthase and other proteins. Q433_01800 SM00382 ATPases associated with a variety of cellular activities Q433_01835 SM00632 Q433_01835 Q433_01835 SM00642 Alpha-amylase domain Q433_01860 SM00347 helix_turn_helix multiple antibiotic resistance protein Q433_01980 SM00926 Molybdopterin oxidoreductase Fe4S4 domain Q433_02010 SM00833 Cobalamin synthesis protein cobW C-terminal domain Q433_02020 SM00062 Bacterial periplasmic substrate-binding proteins Q433_02060 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). Q433_02060 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Q433_02070 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family Q433_02085 SM00823 Phosphopantetheine attachment site Q433_02085 SM01294 Q433_02085 Q433_02090 SM00823 Phosphopantetheine attachment site Q433_02090 SM01294 Q433_02090 Q433_02095 SM00823 Phosphopantetheine attachment site Q433_02145 SM00382 ATPases associated with a variety of cellular activities Q433_02155 SM00062 Bacterial periplasmic substrate-binding proteins Q433_02195 SM00710 Parallel beta-helix repeats Q433_02195 SM00722 Domain present in carbohydrate binding proteins and sugar hydrolses Q433_02220 SM00382 ATPases associated with a variety of cellular activities Q433_02230 SM00448 cheY-homologous receiver domain Q433_02230 SM00862 Transcriptional regulatory protein, C terminal Q433_02235 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Q433_02235 SM00387 Histidine kinase-like ATPases Q433_02235 SM00388 His Kinase A (phosphoacceptor) domain Q433_02240 SM00028 Tetratricopeptide repeats Q433_02280 SM00382 ATPases associated with a variety of cellular activities Q433_02310 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor Q433_02315 SM00345 helix_turn_helix gluconate operon transcriptional repressor Q433_02350 SM00420 helix_turn_helix, Deoxyribose operon repressor Q433_02375 SM01329 Q433_02375 Q433_02420 SM00796 Allophanate hydrolase subunit 1 Q433_02425 SM00797 Allophanate hydrolase subunit 2 Q433_02430 SM00346 helix_turn_helix isocitrate lyase regulation Q433_02515 SM00344 helix_turn_helix ASNC type Q433_02520 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain Q433_02520 SM00437 Bacterial DNA topoisomerase I DNA-binding domain Q433_02520 SM00493 Q433_02520 Q433_02530 SM00267 diguanylate cyclase Q433_02625 SM00091 PAS domain Q433_02625 SM00387 Histidine kinase-like ATPases Q433_02630 SM00448 cheY-homologous receiver domain Q433_02650 SM00382 ATPases associated with a variety of cellular activities Q433_02705 SM00487 DEAD-like helicases superfamily Q433_02705 SM00490 helicase superfamily c-terminal domain Q433_02735 SM01005 Alanine racemase, C-terminal domain Q433_02760 SM00387 Histidine kinase-like ATPases Q433_02765 SM00331 Sigma factor PP2C-like phosphatases Q433_02785 SM00331 Sigma factor PP2C-like phosphatases Q433_02785 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain Q433_02790 SM00316 Ribosomal protein S1-like RNA-binding domain Q433_02790 SM00732 Likely ribonuclease with RNase H fold. Q433_02800 SM00731 SprT homologues. Q433_02855 SM00530 Helix-turn-helix XRE-family like proteins Q433_02890 SM00357 Cold shock protein domain Q433_02910 SM00342 helix_turn_helix, arabinose operon control protein Q433_02925 SM00345 helix_turn_helix gluconate operon transcriptional repressor Q433_02975 SM00345 helix_turn_helix gluconate operon transcriptional repressor Q433_03015 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor Q433_03040 SM00345 helix_turn_helix gluconate operon transcriptional repressor Q433_03050 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor Q433_03075 SM00387 Histidine kinase-like ATPases Q433_03080 SM00421 helix_turn_helix, Lux Regulon Q433_03080 SM00448 cheY-homologous receiver domain Q433_03105 SM00422 helix_turn_helix, mercury resistance Q433_03105 SM00871 Bacterial transcription activator, effector binding domain Q433_03215 SM00347 helix_turn_helix multiple antibiotic resistance protein Q433_03230 SM00347 helix_turn_helix multiple antibiotic resistance protein Q433_03230 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor Q433_03250 SM00345 helix_turn_helix gluconate operon transcriptional repressor Q433_03250 SM00895 Q433_03250 Q433_03255 SM00257 Lysin motif Q433_03255 SM00636 Q433_03255 Q433_03270 SM00098 Alkaline phosphatase homologues Q433_03290 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. Q433_03330 SM00345 helix_turn_helix gluconate operon transcriptional repressor Q433_03330 SM00866 Q433_03330 Q433_03420 SM00382 ATPases associated with a variety of cellular activities Q433_03430 SM00881 CoA binding domain Q433_03455 SM00883 Chaperonin 10 Kd subunit Q433_03470 SM00028 Tetratricopeptide repeats Q433_03470 SM00382 ATPases associated with a variety of cellular activities Q433_03475 SM00829 Enoylreductase Q433_03525 SM00829 Enoylreductase Q433_03590 SM00460 Transglutaminase/protease-like homologues Q433_03645 SM01001 AIR carboxylase Q433_03655 SM00998 Adenylosuccinate lyase C-terminus Q433_03670 SM01211 Q433_03670 Q433_03695 SM00798 AICARFT/IMPCHase bienzyme Q433_03695 SM00851 MGS-like domain Q433_03700 SM01209 Q433_03700 Q433_03700 SM01210 Q433_03700 Q433_03705 SM00344 helix_turn_helix ASNC type Q433_03755 SM00278 Helix-hairpin-helix DNA-binding motif class 1 Q433_03755 SM00292 breast cancer carboxy-terminal domain Q433_03755 SM00532 Ligase N family Q433_03790 SM00845 GatB domain Q433_03805 SM00046 Diacylglycerol kinase catalytic domain (presumed) Q433_03820 SM00028 Tetratricopeptide repeats Q433_03845 SM00028 Tetratricopeptide repeats Q433_03920 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Q433_03920 SM00387 Histidine kinase-like ATPases Q433_03925 SM00342 helix_turn_helix, arabinose operon control protein Q433_03925 SM00448 cheY-homologous receiver domain Q433_03950 SM00342 helix_turn_helix, arabinose operon control protein Q433_04055 SM00347 helix_turn_helix multiple antibiotic resistance protein Q433_04065 SM00894 Excalibur calcium-binding domain Q433_04145 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). Q433_04150 SM00382 ATPases associated with a variety of cellular activities Q433_04160 SM00422 helix_turn_helix, mercury resistance Q433_04185 SM00382 ATPases associated with a variety of cellular activities Q433_04195 SM00487 DEAD-like helicases superfamily Q433_04195 SM00490 helicase superfamily c-terminal domain Q433_04205 SM00829 Enoylreductase Q433_04235 SM00382 ATPases associated with a variety of cellular activities Q433_04265 SM00656 Q433_04265 Q433_04275 SM00387 Histidine kinase-like ATPases Q433_04280 SM00448 cheY-homologous receiver domain Q433_04300 SM00849 Metallo-beta-lactamase superfamily Q433_04395 SM00642 Alpha-amylase domain Q433_04400 SM00345 helix_turn_helix gluconate operon transcriptional repressor Q433_04400 SM00866 Q433_04400 Q433_04440 SM00226 Low molecular weight phosphatase family Q433_04510 SM00478 endonuclease III Q433_04550 SM00861 Transketolase, pyrimidine binding domain Q433_04565 SM00382 ATPases associated with a variety of cellular activities Q433_04620 SM00382 ATPases associated with a variety of cellular activities Q433_04625 SM00382 ATPases associated with a variety of cellular activities Q433_04645 SM00421 helix_turn_helix, Lux Regulon Q433_04645 SM00448 cheY-homologous receiver domain Q433_04655 SM00382 ATPases associated with a variety of cellular activities Q433_04700 SM00347 helix_turn_helix multiple antibiotic resistance protein Q433_04780 SM00287 Bacterial SH3 domain homologues Q433_04815 SM00478 endonuclease III Q433_04815 SM00525 Q433_04815 Q433_04845 SM00382 ATPases associated with a variety of cellular activities Q433_05015 SM01060 Q433_05015 Q433_05025 SM00382 ATPases associated with a variety of cellular activities Q433_05030 SM00062 Bacterial periplasmic substrate-binding proteins Q433_05060 SM00530 Helix-turn-helix XRE-family like proteins Q433_05075 SM00567 E-Z type HEAT repeats Q433_05110 SM00763 PrkA AAA domain Q433_05125 SM00347 helix_turn_helix multiple antibiotic resistance protein Q433_05160 SM00345 helix_turn_helix gluconate operon transcriptional repressor Q433_05165 SM00382 ATPases associated with a variety of cellular activities Q433_05170 SM00382 ATPases associated with a variety of cellular activities Q433_05180 SM00357 Cold shock protein domain Q433_05195 SM00267 diguanylate cyclase Q433_05225 SM00318 Staphylococcal nuclease homologues Q433_05235 SM00363 S4 RNA-binding domain Q433_05245 SM00116 Domain in cystathionine beta-synthase and other proteins. Q433_05295 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. Q433_05295 SM00387 Histidine kinase-like ATPases Q433_05300 SM00421 helix_turn_helix, Lux Regulon Q433_05300 SM00448 cheY-homologous receiver domain Q433_05320 SM00257 Lysin motif Q433_05340 SM00098 Alkaline phosphatase homologues Q433_05345 SM00257 Lysin motif Q433_05375 SM00345 helix_turn_helix gluconate operon transcriptional repressor Q433_05405 SM00563 Phosphate acyltransferases Q433_05410 SM01091 Transporter associated domain Q433_05415 SM00422 helix_turn_helix, mercury resistance Q433_05430 SM01091 Transporter associated domain Q433_05495 SM00382 ATPases associated with a variety of cellular activities Q433_05500 SM00382 ATPases associated with a variety of cellular activities Q433_05555 SM00729 Elongator protein 3, MiaB family, Radical SAM Q433_05585 SM00382 ATPases associated with a variety of cellular activities Q433_05605 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. Q433_05650 SM00347 helix_turn_helix multiple antibiotic resistance protein Q433_05685 SM00382 ATPases associated with a variety of cellular activities Q433_05780 SM01022 Q433_05780 Q433_05795 SM00849 Metallo-beta-lactamase superfamily Q433_05840 SM00829 Enoylreductase Q433_05855 SM00855 Phosphoglycerate mutase family Q433_05875 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). Q433_05895 SM00914 Q433_05895 Q433_05915 SM00894 Excalibur calcium-binding domain Q433_05950 SM00347 helix_turn_helix multiple antibiotic resistance protein Q433_05975 SM00354 helix_turn _helix lactose operon repressor Q433_06120 SM00342 helix_turn_helix, arabinose operon control protein Q433_06125 SM00354 helix_turn _helix lactose operon repressor Q433_06150 SM00345 helix_turn_helix gluconate operon transcriptional repressor Q433_06195 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain Q433_06230 SM00316 Ribosomal protein S1-like RNA-binding domain Q433_06240 SM00752 Horizontally Transferred TransMembrane Domain Q433_06325 SM00859 Semialdehyde dehydrogenase, NAD binding domain Q433_06345 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain Q433_06350 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain Q433_06405 SM00825 Beta-ketoacyl synthase Q433_06415 SM00382 ATPases associated with a variety of cellular activities Q433_06420 SM00382 ATPases associated with a variety of cellular activities Q433_06470 SM00382 ATPases associated with a variety of cellular activities Q433_06475 SM00382 ATPases associated with a variety of cellular activities Q433_06545 SM01118 Q433_06545 Q433_06555 SM00954 Region found in RelA / SpoT proteins Q433_06825 SM00635 Bacterial Ig-like domain 2 Q433_06925 SM00926 Molybdopterin oxidoreductase Fe4S4 domain Q433_06925 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region Q433_06975 SM00382 ATPases associated with a variety of cellular activities Q433_06990 SM00835 Cupin Q433_07030 SM00829 Enoylreductase Q433_07050 SM00354 helix_turn _helix lactose operon repressor Q433_07060 SM00858 Q433_07060 Q433_07075 SM00382 ATPases associated with a variety of cellular activities Q433_07080 SM00028 Tetratricopeptide repeats Q433_07095 SM00257 Lysin motif Q433_07095 SM00644 Q433_07095 Q433_07120 SM00530 Helix-turn-helix XRE-family like proteins Q433_07135 SM00382 ATPases associated with a variety of cellular activities Q433_07240 SM00257 Lysin motif Q433_07305 SM00257 Lysin motif Q433_07305 SM00644 Q433_07305 Q433_07375 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. Q433_07400 SM00382 ATPases associated with a variety of cellular activities Q433_07420 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain Q433_07430 SM00382 ATPases associated with a variety of cellular activities Q433_07490 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase Q433_07510 SM00347 helix_turn_helix multiple antibiotic resistance protein Q433_07555 SM00382 ATPases associated with a variety of cellular activities Q433_07570 SM00448 cheY-homologous receiver domain Q433_07570 SM00862 Transcriptional regulatory protein, C terminal Q433_07575 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Q433_07575 SM00387 Histidine kinase-like ATPases Q433_07575 SM00388 His Kinase A (phosphoacceptor) domain Q433_07610 SM00116 Domain in cystathionine beta-synthase and other proteins. Q433_07610 SM00924 MgtE intracellular N domain Q433_07615 SM00422 helix_turn_helix, mercury resistance Q433_07630 SM00347 helix_turn_helix multiple antibiotic resistance protein Q433_07665 SM00559 Ku70 and Ku80 are 70kDa and 80kDa subunits of the Lupus Ku autoantigen Q433_07670 SM00052 Putative diguanylate phosphodiesterase Q433_07670 SM00267 diguanylate cyclase Q433_07735 SM00091 PAS domain Q433_07735 SM00387 Histidine kinase-like ATPases Q433_07735 SM00388 His Kinase A (phosphoacceptor) domain Q433_07780 SM01007 Class II Aldolase and Adducin N-terminal domain Q433_07805 SM00387 Histidine kinase-like ATPases Q433_07805 SM00388 His Kinase A (phosphoacceptor) domain Q433_07815 SM00347 helix_turn_helix multiple antibiotic resistance protein Q433_07835 SM00382 ATPases associated with a variety of cellular activities Q433_07835 SM01086 C-terminal, D2-small domain, of ClpB protein Q433_07875 SM00822 Q433_07875 Q433_07880 SM00257 Lysin motif Q433_07885 SM00257 Lysin motif Q433_07890 SM00636 Q433_07890 Q433_07960 SM00354 helix_turn _helix lactose operon repressor Q433_07965 SM01061 CAT RNA binding domain Q433_08005 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). Q433_08005 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Q433_08025 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) Q433_08025 SM00091 PAS domain Q433_08025 SM00387 Histidine kinase-like ATPases Q433_08025 SM00388 His Kinase A (phosphoacceptor) domain Q433_08040 SM00260 Two component signalling adaptor domain Q433_08040 SM00448 cheY-homologous receiver domain Q433_08055 SM00257 Lysin motif Q433_08070 SM00052 Putative diguanylate phosphodiesterase Q433_08185 SM00852 Probable molybdopterin binding domain Q433_08205 SM00382 ATPases associated with a variety of cellular activities Q433_08210 SM00382 ATPases associated with a variety of cellular activities Q433_08225 SM00382 ATPases associated with a variety of cellular activities Q433_08230 SM01066 Carbohydrate binding domain Q433_08235 SM00420 helix_turn_helix, Deoxyribose operon repressor Q433_08235 SM01134 Q433_08235 Q433_08260 SM00382 ATPases associated with a variety of cellular activities Q433_08290 SM00966 SpoVT / AbrB like domain Q433_08295 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) Q433_08295 SM00091 PAS domain Q433_08295 SM00387 Histidine kinase-like ATPases Q433_08295 SM00388 His Kinase A (phosphoacceptor) domain Q433_08315 SM00849 Metallo-beta-lactamase superfamily Q433_08355 SM00861 Transketolase, pyrimidine binding domain Q433_08460 SM00838 Elongation factor G C-terminus Q433_08480 SM00670 Large family of predicted nucleotide-binding domains Q433_08505 SM00878 Biotin carboxylase C-terminal domain Q433_08565 SM00116 Domain in cystathionine beta-synthase and other proteins. Q433_08620 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. Q433_08685 SM00740 Q433_08685 Q433_08695 SM00740 Q433_08695 Q433_08760 SM00842 Cell division protein FtsA Q433_08765 SM00864 Tubulin/FtsZ family, GTPase domain Q433_08765 SM00865 Tubulin/FtsZ family, C-terminal domain Q433_08795 SM00382 ATPases associated with a variety of cellular activities Q433_08835 SM00363 S4 RNA-binding domain Q433_08870 SM00363 S4 RNA-binding domain Q433_08900 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain Q433_08905 SM00851 MGS-like domain Q433_08905 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain Q433_08905 SM01209 Q433_08905 Q433_08920 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family Q433_08980 SM00831 Cation transporter/ATPase, N-terminus Q433_08995 SM00072 Guanylate kinase homologues. Q433_09000 SM01409 Q433_09000 Q433_09010 SM00487 DEAD-like helicases superfamily Q433_09010 SM00490 helicase superfamily c-terminal domain Q433_09035 SM00331 Sigma factor PP2C-like phosphatases Q433_09035 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain Q433_09040 SM00220 Serine/Threonine protein kinases, catalytic domain Q433_09040 SM00740 Q433_09040 Q433_09055 SM00983 Thiamin pyrophosphokinase, vitamin B1 binding domain Q433_09075 SM01120 Q433_09075 Q433_09075 SM01121 Q433_09075 Q433_09090 SM00487 DEAD-like helicases superfamily Q433_09090 SM00490 helicase superfamily c-terminal domain Q433_09105 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. Q433_09110 SM00822 Q433_09110 Q433_09120 SM00358 Double-stranded RNA binding motif Q433_09120 SM00535 Ribonuclease III family Q433_09125 SM00968 SMC proteins Flexible Hinge Domain Q433_09130 SM00382 ATPases associated with a variety of cellular activities Q433_09130 SM00962 SRP54-type protein, GTPase domain Q433_09130 SM00963 SRP54-type protein, helical bundle domain Q433_09145 SM00382 ATPases associated with a variety of cellular activities Q433_09145 SM00962 SRP54-type protein, GTPase domain Q433_09145 SM00963 SRP54-type protein, helical bundle domain Q433_09205 SM00881 CoA binding domain Q433_09215 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain Q433_09215 SM00437 Bacterial DNA topoisomerase I DNA-binding domain Q433_09215 SM00493 Q433_09215 Q433_09235 SM00382 ATPases associated with a variety of cellular activities Q433_09235 SM01086 C-terminal, D2-small domain, of ClpB protein Q433_09275 SM00382 ATPases associated with a variety of cellular activities Q433_09325 SM00448 cheY-homologous receiver domain Q433_09360 SM00962 SRP54-type protein, GTPase domain Q433_09370 SM00448 cheY-homologous receiver domain Q433_09375 SM00073 Histidine Phosphotransfer domain Q433_09375 SM00260 Two component signalling adaptor domain Q433_09375 SM00387 Histidine kinase-like ATPases Q433_09375 SM01231 Q433_09375 Q433_09380 SM00260 Two component signalling adaptor domain Q433_09440 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. Q433_09450 SM00479 Q433_09450 Q433_09450 SM00481 DNA polymerase alpha chain like domain Q433_09460 SM00316 Ribosomal protein S1-like RNA-binding domain Q433_09460 SM00322 K homology RNA-binding domain Q433_09495 SM00904 Riboflavin kinase Q433_09500 SM01387 Q433_09500 Q433_09505 SM00316 Ribosomal protein S1-like RNA-binding domain Q433_09505 SM00322 K homology RNA-binding domain Q433_09540 SM00859 Semialdehyde dehydrogenase, NAD binding domain Q433_09550 SM01130 Q433_09550 Q433_09555 SM00849 Metallo-beta-lactamase superfamily Q433_09570 SM00382 ATPases associated with a variety of cellular activities Q433_09570 SM00843 Q433_09570 Q433_09575 SM00345 helix_turn_helix gluconate operon transcriptional repressor Q433_09575 SM00866 Q433_09575 Q433_09615 SM00530 Helix-turn-helix XRE-family like proteins Q433_09625 SM00852 Probable molybdopterin binding domain Q433_09630 SM00382 ATPases associated with a variety of cellular activities Q433_09640 SM00322 K homology RNA-binding domain Q433_09640 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. Q433_09655 SM00829 Enoylreductase Q433_09665 SM00729 Elongator protein 3, MiaB family, Radical SAM Q433_09680 SM00533 DNA-binding domain of DNA mismatch repair MUTS family Q433_09680 SM00534 ATPase domain of DNA mismatch repair MUTS family Q433_09685 SM00853 MutL C terminal dimerisation domain Q433_09685 SM01340 Q433_09685 Q433_09715 SM00849 Metallo-beta-lactamase superfamily Q433_09725 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. Q433_09735 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. Q433_09740 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. Q433_09750 SM00825 Beta-ketoacyl synthase Q433_09770 SM00822 Q433_09770 Q433_09770 SM00823 Phosphopantetheine attachment site Q433_09770 SM00825 Beta-ketoacyl synthase Q433_09770 SM00826 Q433_09770 Q433_09770 SM01294 Q433_09770 Q433_09775 SM00822 Q433_09775 Q433_09775 SM00823 Phosphopantetheine attachment site Q433_09775 SM00825 Beta-ketoacyl synthase Q433_09775 SM00826 Q433_09775 Q433_09775 SM01294 Q433_09775 Q433_09780 SM00822 Q433_09780 Q433_09780 SM00823 Phosphopantetheine attachment site Q433_09780 SM00825 Beta-ketoacyl synthase Q433_09780 SM00826 Q433_09780 Q433_09780 SM01294 Q433_09780 Q433_09785 SM00822 Q433_09785 Q433_09785 SM00823 Phosphopantetheine attachment site Q433_09785 SM00825 Beta-ketoacyl synthase Q433_09785 SM00826 Q433_09785 Q433_09785 SM01294 Q433_09785 Q433_09790 SM00823 Phosphopantetheine attachment site Q433_09790 SM00825 Beta-ketoacyl synthase Q433_09790 SM01294 Q433_09790 Q433_09805 SM00849 Metallo-beta-lactamase superfamily Q433_09895 SM00646 Q433_09895 Q433_09910 SM00382 ATPases associated with a variety of cellular activities Q433_09930 SM00422 helix_turn_helix, mercury resistance Q433_09935 SM01230 Q433_09935 Q433_09950 SM00530 Helix-turn-helix XRE-family like proteins Q433_09955 SM00530 Helix-turn-helix XRE-family like proteins Q433_10085 SM00507 HNH nucleases Q433_10170 SM00047 Lysozyme subfamily 2 Q433_10215 SM00257 Lysin motif Q433_10215 SM00644 Q433_10215 Q433_10285 SM00028 Tetratricopeptide repeats Q433_10390 SM00318 Staphylococcal nuclease homologues Q433_10400 SM01005 Alanine racemase, C-terminal domain Q433_10555 SM00257 Lysin motif Q433_10560 SM00857 Resolvase, N terminal domain Q433_10570 SM00861 Transketolase, pyrimidine binding domain Q433_10600 SM00448 cheY-homologous receiver domain Q433_10670 SM01207 Q433_10670 Q433_10680 SM00881 CoA binding domain Q433_10685 SM00387 Histidine kinase-like ATPases Q433_10685 SM00433 TopoisomeraseII Q433_10690 SM00434 DNA Topoisomerase IV Q433_10715 SM01067 Cellulose binding domain Q433_10730 SM00606 Cellulose Binding Domain Type IV Q433_10780 SM00878 Biotin carboxylase C-terminal domain Q433_10815 SM00823 Phosphopantetheine attachment site Q433_10815 SM00824 Thioesterase Q433_10820 SM00823 Phosphopantetheine attachment site Q433_10825 SM00823 Phosphopantetheine attachment site Q433_10835 SM00823 Phosphopantetheine attachment site Q433_10840 SM00823 Phosphopantetheine attachment site Q433_10890 SM00829 Enoylreductase Q433_10910 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase Q433_10930 SM00822 Q433_10930 Q433_10980 SM00926 Molybdopterin oxidoreductase Fe4S4 domain Q433_11005 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). Q433_11005 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Q433_11025 SM00656 Q433_11025 Q433_11045 SM00835 Cupin Q433_11085 SM00530 Helix-turn-helix XRE-family like proteins Q433_11160 SM00530 Helix-turn-helix XRE-family like proteins Q433_11335 SM00860 SMI1 / KNR4 family Q433_11350 SM00342 helix_turn_helix, arabinose operon control protein Q433_11365 SM00849 Metallo-beta-lactamase superfamily Q433_11370 SM00871 Bacterial transcription activator, effector binding domain Q433_11385 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor Q433_11425 SM00421 helix_turn_helix, Lux Regulon Q433_11425 SM00448 cheY-homologous receiver domain Q433_11435 SM00257 Lysin motif Q433_11440 SM00341 Helicase and RNase D C-terminal Q433_11440 SM00487 DEAD-like helicases superfamily Q433_11440 SM00490 helicase superfamily c-terminal domain Q433_11440 SM00956 Q433_11440 Q433_11530 SM00861 Transketolase, pyrimidine binding domain Q433_11535 SM00327 von Willebrand factor (vWF) type A domain Q433_11540 SM00382 ATPases associated with a variety of cellular activities Q433_11550 SM00257 Lysin motif Q433_11650 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. Q433_11650 SM00245 tail specific protease Q433_11695 SM00014 Acid phosphatase homologues Q433_11740 SM00882 Coenzyme A transferase Q433_11745 SM00882 Coenzyme A transferase Q433_11815 SM00347 helix_turn_helix multiple antibiotic resistance protein Q433_11855 SM00382 ATPases associated with a variety of cellular activities Q433_11915 SM00567 E-Z type HEAT repeats Q433_11915 SM00932 Scaffold protein Nfu/NifU N terminal Q433_11920 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. Q433_11950 SM00357 Cold shock protein domain Q433_11990 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs Q433_11990 SM00475 5'-3' exonuclease Q433_12060 SM00354 helix_turn _helix lactose operon repressor Q433_12075 SM00491 Q433_12075 Q433_12090 SM00981 Q433_12090 Q433_12120 SM00487 DEAD-like helicases superfamily Q433_12120 SM00490 helicase superfamily c-terminal domain Q433_12180 SM00478 endonuclease III Q433_12180 SM00525 Q433_12180 Q433_12210 SM00479 Q433_12210 Q433_12210 SM00487 DEAD-like helicases superfamily Q433_12210 SM00491 Q433_12210 Q433_12250 SM00851 MGS-like domain Q433_12300 SM00914 Q433_12300 Q433_12305 SM00028 Tetratricopeptide repeats Q433_12375 SM00138 Methyltransferase, chemotaxis proteins Q433_12385 SM00562 Q433_12385 Q433_12415 SM00411 bacterial (prokaryotic) histone like domain Q433_12475 SM00316 Ribosomal protein S1-like RNA-binding domain Q433_12520 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase Q433_12545 SM00257 Lysin motif Q433_12555 SM00487 DEAD-like helicases superfamily Q433_12555 SM00490 helicase superfamily c-terminal domain Q433_12600 SM00091 PAS domain Q433_12600 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Q433_12600 SM00387 Histidine kinase-like ATPases Q433_12600 SM00388 His Kinase A (phosphoacceptor) domain Q433_12605 SM00448 cheY-homologous receiver domain Q433_12605 SM00862 Transcriptional regulatory protein, C terminal Q433_12630 SM00363 S4 RNA-binding domain Q433_12645 SM00936 Penicillin-binding protein 5, C-terminal domain Q433_12805 SM00387 Histidine kinase-like ATPases Q433_12815 SM00936 Penicillin-binding protein 5, C-terminal domain Q433_12865 SM00919 Malic enzyme, NAD binding domain Q433_12865 SM01274 Q433_12865 Q433_12880 SM00870 Q433_12880 Q433_12885 SM00530 Helix-turn-helix XRE-family like proteins Q433_13000 SM00849 Metallo-beta-lactamase superfamily Q433_13030 SM00849 Metallo-beta-lactamase superfamily Q433_13045 SM01350 Q433_13045 Q433_13100 SM00382 ATPases associated with a variety of cellular activities Q433_13110 SM00062 Bacterial periplasmic substrate-binding proteins Q433_13110 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. Q433_13125 SM00046 Diacylglycerol kinase catalytic domain (presumed) Q433_13135 SM00422 helix_turn_helix, mercury resistance Q433_13145 SM00861 Transketolase, pyrimidine binding domain Q433_13165 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase Q433_13175 SM00091 PAS domain Q433_13175 SM00382 ATPases associated with a variety of cellular activities Q433_13220 SM00646 Q433_13220 Q433_13250 SM00448 cheY-homologous receiver domain Q433_13260 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. Q433_13275 SM00363 S4 RNA-binding domain Q433_13280 SM00861 Transketolase, pyrimidine binding domain Q433_13325 SM00878 Biotin carboxylase C-terminal domain Q433_13370 SM00382 ATPases associated with a variety of cellular activities Q433_13380 SM00841 Elongation factor P, C-terminal Q433_13380 SM01185 Q433_13380 Q433_13415 SM00529 Helix-turn-helix diphteria tox regulatory element Q433_13425 SM00450 Rhodanese Homology Domain Q433_13445 SM00487 DEAD-like helicases superfamily Q433_13445 SM00490 helicase superfamily c-terminal domain Q433_13460 SM00530 Helix-turn-helix XRE-family like proteins Q433_13520 SM00382 ATPases associated with a variety of cellular activities Q433_13540 SM01091 Transporter associated domain Q433_13590 SM00631 Q433_13590 Q433_13610 SM00028 Tetratricopeptide repeats Q433_13660 SM00382 ATPases associated with a variety of cellular activities Q433_13665 SM00382 ATPases associated with a variety of cellular activities Q433_13710 SM00257 Lysin motif Q433_13745 SM00518 AP endonuclease family 2 Q433_13750 SM00487 DEAD-like helicases superfamily Q433_13750 SM00490 helicase superfamily c-terminal domain Q433_13790 SM00400 zinc finger Q433_13790 SM00493 Q433_13790 Q433_13805 SM00116 Domain in cystathionine beta-synthase and other proteins. Q433_13855 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. Q433_13910 SM00729 Elongator protein 3, MiaB family, Radical SAM Q433_13925 SM00271 DnaJ molecular chaperone homology domain Q433_13945 SM00729 Elongator protein 3, MiaB family, Radical SAM Q433_13950 SM00838 Elongation factor G C-terminus Q433_13990 SM00849 Metallo-beta-lactamase superfamily Q433_14000 SM00278 Helix-hairpin-helix DNA-binding motif class 1 Q433_14020 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. Q433_14030 SM01103 Q433_14030 Q433_14075 SM00644 Q433_14075 Q433_14115 SM00388 His Kinase A (phosphoacceptor) domain Q433_14120 SM00448 cheY-homologous receiver domain Q433_14120 SM00862 Transcriptional regulatory protein, C terminal Q433_14165 SM00450 Rhodanese Homology Domain Q433_14165 SM00849 Metallo-beta-lactamase superfamily Q433_14175 SM00450 Rhodanese Homology Domain Q433_14210 SM00422 helix_turn_helix, mercury resistance Q433_14225 SM01091 Transporter associated domain Q433_14290 SM00344 helix_turn_helix ASNC type Q433_14365 SM00345 helix_turn_helix gluconate operon transcriptional repressor Q433_14365 SM00895 Q433_14365 Q433_14380 SM00822 Q433_14380 Q433_14385 SM00861 Transketolase, pyrimidine binding domain Q433_14395 SM00903 Flavin reductase like domain Q433_14405 SM00422 helix_turn_helix, mercury resistance Q433_14475 SM00287 Bacterial SH3 domain homologues Q433_14520 SM00422 helix_turn_helix, mercury resistance Q433_14530 SM00829 Enoylreductase Q433_14540 SM00640 Glycosyl hydrolases family 32 Q433_14565 SM00382 ATPases associated with a variety of cellular activities Q433_14665 SM00926 Molybdopterin oxidoreductase Fe4S4 domain Q433_14665 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region Q433_14695 SM00650 Ribosomal RNA adenine dimethylases Q433_14750 SM00732 Likely ribonuclease with RNase H fold. Q433_14760 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain Q433_14770 SM00382 ATPases associated with a variety of cellular activities Q433_14775 SM00062 Bacterial periplasmic substrate-binding proteins Q433_14775 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. Q433_14805 SM00382 ATPases associated with a variety of cellular activities Q433_14810 SM00028 Tetratricopeptide repeats Q433_14830 SM00382 ATPases associated with a variety of cellular activities Q433_14865 SM00287 Bacterial SH3 domain homologues Q433_14865 SM00646 Q433_14865 Q433_14875 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. Q433_14875 SM00954 Region found in RelA / SpoT proteins Q433_14935 SM01323 Q433_14935 Q433_14955 SM00382 ATPases associated with a variety of cellular activities Q433_14960 SM00278 Helix-hairpin-helix DNA-binding motif class 1 Q433_15015 SM00257 Lysin motif Q433_15060 SM01317 Q433_15060 Q433_15175 SM00257 Lysin motif Q433_15185 SM01004 Delta-aminolevulinic acid dehydratase Q433_15220 SM00382 ATPases associated with a variety of cellular activities Q433_15220 SM00464 Found in ATP-dependent protease La (LON) Q433_15225 SM00382 ATPases associated with a variety of cellular activities Q433_15235 SM00382 ATPases associated with a variety of cellular activities Q433_15235 SM00994 ClpX C4-type zinc finger Q433_15235 SM01086 C-terminal, D2-small domain, of ClpB protein Q433_15265 SM01329 Q433_15265 Q433_15270 SM00917 LeuA allosteric (dimerisation) domain Q433_15340 SM00909 Sporulation and spore germination Q433_15350 SM00347 helix_turn_helix multiple antibiotic resistance protein Q433_15360 SM00421 helix_turn_helix, Lux Regulon Q433_15405 SM00465 GIY-YIG type nucleases (URI domain) Q433_15425 SM00813 Alpha-L-arabinofuranosidase C-terminus Q433_15430 SM00893 Electron transfer flavoprotein domain Q433_15435 SM00893 Electron transfer flavoprotein domain Q433_15465 SM00463 Small MutS-related domain Q433_15465 SM00533 DNA-binding domain of DNA mismatch repair MUTS family Q433_15465 SM00534 ATPase domain of DNA mismatch repair MUTS family Q433_15470 SM00278 Helix-hairpin-helix DNA-binding motif class 1 Q433_15470 SM00481 DNA polymerase alpha chain like domain Q433_15470 SM00483 DNA polymerase X family Q433_15490 SM00873 B3/4 domain Q433_15490 SM00874 tRNA synthetase B5 domain Q433_15490 SM00896 Ferredoxin-fold anticodon binding domain Q433_15505 SM00967 RNA 2'-O ribose methyltransferase substrate binding Q433_15540 SM00813 Alpha-L-arabinofuranosidase C-terminus Q433_15570 SM01007 Class II Aldolase and Adducin N-terminal domain Q433_15655 SM00448 cheY-homologous receiver domain Q433_15655 SM00850 LytTr DNA-binding domain Q433_15660 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. Q433_15660 SM00387 Histidine kinase-like ATPases Q433_15670 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain Q433_15690 SM00382 ATPases associated with a variety of cellular activities Q433_15715 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain Q433_15745 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain Q433_15745 SM01232 Q433_15745 Q433_15750 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs Q433_15750 SM00474 3'-5' exonuclease Q433_15750 SM00475 5'-3' exonuclease Q433_15750 SM00482 DNA polymerase A domain Q433_15760 SM00091 PAS domain Q433_15760 SM00387 Histidine kinase-like ATPases Q433_15760 SM00388 His Kinase A (phosphoacceptor) domain Q433_15765 SM00448 cheY-homologous receiver domain Q433_15765 SM00862 Transcriptional regulatory protein, C terminal Q433_15780 SM01329 Q433_15780 Q433_15835 SM00919 Malic enzyme, NAD binding domain Q433_15835 SM01274 Q433_15835 Q433_15840 SM00481 DNA polymerase alpha chain like domain Q433_15875 SM00116 Domain in cystathionine beta-synthase and other proteins. Q433_15895 SM00904 Riboflavin kinase Q433_15915 SM00382 ATPases associated with a variety of cellular activities Q433_15930 SM00062 Bacterial periplasmic substrate-binding proteins Q433_15935 SM00062 Bacterial periplasmic substrate-binding proteins Q433_15950 SM00849 Metallo-beta-lactamase superfamily Q433_15985 SM00852 Probable molybdopterin binding domain Q433_16055 SM00981 Q433_16055 Q433_16085 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. Q433_16090 SM00267 diguanylate cyclase Q433_16100 SM00363 S4 RNA-binding domain Q433_16100 SM01390 Q433_16100 Q433_16110 SM00363 S4 RNA-binding domain Q433_16130 SM00116 Domain in cystathionine beta-synthase and other proteins. Q433_16150 SM00354 helix_turn _helix lactose operon repressor Q433_16155 SM00830 Chorismate mutase type II Q433_16180 SM00382 ATPases associated with a variety of cellular activities Q433_16180 SM00843 Q433_16180 Q433_16220 SM00919 Malic enzyme, NAD binding domain Q433_16220 SM01274 Q433_16220 Q433_16225 SM00849 Metallo-beta-lactamase superfamily Q433_16245 SM00642 Alpha-amylase domain Q433_16250 SM00046 Diacylglycerol kinase catalytic domain (presumed) Q433_16285 SM00382 ATPases associated with a variety of cellular activities Q433_16290 SM00420 helix_turn_helix, Deoxyribose operon repressor Q433_16295 SM00363 S4 RNA-binding domain Q433_16355 SM00342 helix_turn_helix, arabinose operon control protein Q433_16380 SM00729 Elongator protein 3, MiaB family, Radical SAM Q433_16380 SM00876 Biotin and Thiamin Synthesis associated domain Q433_16410 SM00354 helix_turn _helix lactose operon repressor Q433_16435 SM00450 Rhodanese Homology Domain Q433_16455 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) Q433_16455 SM00091 PAS domain Q433_16480 SM00382 ATPases associated with a variety of cellular activities Q433_16485 SM00387 Histidine kinase-like ATPases Q433_16490 SM00448 cheY-homologous receiver domain Q433_16490 SM00862 Transcriptional regulatory protein, C terminal Q433_16500 SM00382 ATPases associated with a variety of cellular activities Q433_16515 SM00382 ATPases associated with a variety of cellular activities Q433_16520 SM00345 helix_turn_helix gluconate operon transcriptional repressor Q433_16535 SM00729 Elongator protein 3, MiaB family, Radical SAM Q433_16600 SM00382 ATPases associated with a variety of cellular activities Q433_16645 SM01234 Q433_16645 Q433_16650 SM00947 Carbonic anhydrase Q433_16685 SM00382 ATPases associated with a variety of cellular activities Q433_16700 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain Q433_16750 SM00984 UDP binding domain Q433_16950 SM00244 prohibitin homologues Q433_17005 SM00047 Lysozyme subfamily 2 Q433_17060 SM00420 helix_turn_helix, Deoxyribose operon repressor Q433_17060 SM01134 Q433_17060 Q433_17065 SM01007 Class II Aldolase and Adducin N-terminal domain Q433_17070 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). Q433_17070 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Q433_17070 SM00319 Homologues of the ligand binding domain of Tar Q433_17075 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). Q433_17075 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Q433_17075 SM00319 Homologues of the ligand binding domain of Tar Q433_17080 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). Q433_17080 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Q433_17080 SM00319 Homologues of the ligand binding domain of Tar Q433_17085 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). Q433_17085 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Q433_17085 SM00319 Homologues of the ligand binding domain of Tar Q433_17115 SM00642 Alpha-amylase domain Q433_17120 SM01091 Transporter associated domain Q433_17180 SM00316 Ribosomal protein S1-like RNA-binding domain Q433_17190 SM00344 helix_turn_helix ASNC type Q433_17210 SM00387 Histidine kinase-like ATPases Q433_17210 SM00388 His Kinase A (phosphoacceptor) domain Q433_17215 SM01298 Q433_17215 Q433_17220 SM00479 Q433_17220 Q433_17255 SM00448 cheY-homologous receiver domain Q433_17265 SM00382 ATPases associated with a variety of cellular activities Q433_17330 SM00421 helix_turn_helix, Lux Regulon Q433_17330 SM00448 cheY-homologous receiver domain Q433_17335 SM00387 Histidine kinase-like ATPases Q433_17365 SM00052 Putative diguanylate phosphodiesterase Q433_17410 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. Q433_17465 SM01002 Alanine dehydrogenase/PNT, C-terminal domain Q433_17465 SM01003 Alanine dehydrogenase/PNT, N-terminal domain Q433_17475 SM00923 MbtH-like protein Q433_17480 SM00823 Phosphopantetheine attachment site Q433_17480 SM00824 Thioesterase Q433_17580 SM01240 Q433_17580 Q433_17690 SM00729 Elongator protein 3, MiaB family, Radical SAM Q433_17775 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain Q433_17815 SM00382 ATPases associated with a variety of cellular activities Q433_17820 SM00345 helix_turn_helix gluconate operon transcriptional repressor Q433_17820 SM00866 Q433_17820 Q433_17850 SM00465 GIY-YIG type nucleases (URI domain) Q433_17875 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor Q433_17900 SM00382 ATPases associated with a variety of cellular activities Q433_17935 SM00382 ATPases associated with a variety of cellular activities Q433_17935 SM00930 Q433_17935 Q433_17955 SM00493 Q433_17955 Q433_18010 SM00347 helix_turn_helix multiple antibiotic resistance protein Q433_18040 SM00382 ATPases associated with a variety of cellular activities Q433_18065 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. Q433_18080 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Q433_18080 SM00387 Histidine kinase-like ATPases Q433_18080 SM00388 His Kinase A (phosphoacceptor) domain Q433_18120 SM00421 helix_turn_helix, Lux Regulon Q433_18120 SM00448 cheY-homologous receiver domain Q433_18125 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Q433_18125 SM00387 Histidine kinase-like ATPases Q433_18165 SM00382 ATPases associated with a variety of cellular activities Q433_18195 SM00387 Histidine kinase-like ATPases Q433_18195 SM00388 His Kinase A (phosphoacceptor) domain Q433_18200 SM00448 cheY-homologous receiver domain Q433_18200 SM00862 Transcriptional regulatory protein, C terminal Q433_18230 SM00835 Cupin Q433_18245 SM00382 ATPases associated with a variety of cellular activities Q433_18260 SM00382 ATPases associated with a variety of cellular activities Q433_18440 SM00316 Ribosomal protein S1-like RNA-binding domain Q433_18440 SM00357 Cold shock protein domain Q433_18440 SM00955 Q433_18440 Q433_18460 SM00530 Helix-turn-helix XRE-family like proteins Q433_18465 SM00530 Helix-turn-helix XRE-family like proteins Q433_18470 SM00530 Helix-turn-helix XRE-family like proteins Q433_18480 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). Q433_18480 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Q433_18500 SM00116 Domain in cystathionine beta-synthase and other proteins. Q433_18500 SM00382 ATPases associated with a variety of cellular activities Q433_18530 SM00116 Domain in cystathionine beta-synthase and other proteins. Q433_18530 SM00382 ATPases associated with a variety of cellular activities Q433_18565 SM01192 Q433_18565 Q433_18565 SM01193 Q433_18565 Q433_18595 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain Q433_18610 SM00345 helix_turn_helix gluconate operon transcriptional repressor Q433_18645 SM00636 Q433_18645 Q433_18665 SM00421 helix_turn_helix, Lux Regulon Q433_18665 SM00448 cheY-homologous receiver domain Q433_18680 SM00382 ATPases associated with a variety of cellular activities Q433_18695 SM00331 Sigma factor PP2C-like phosphatases Q433_18725 SM00354 helix_turn _helix lactose operon repressor Q433_18730 SM00345 helix_turn_helix gluconate operon transcriptional repressor Q433_18730 SM00895 Q433_18730 Q433_18830 SM00530 Helix-turn-helix XRE-family like proteins Q433_18870 SM00640 Glycosyl hydrolases family 32 Q433_18925 SM00642 Alpha-amylase domain Q433_18955 SM00642 Alpha-amylase domain Q433_18960 SM00354 helix_turn _helix lactose operon repressor Q433_18980 SM00947 Carbonic anhydrase Q433_18995 SM00382 ATPases associated with a variety of cellular activities Q433_19000 SM00387 Histidine kinase-like ATPases Q433_19005 SM00448 cheY-homologous receiver domain Q433_19005 SM00862 Transcriptional regulatory protein, C terminal Q433_19060 SM00028 Tetratricopeptide repeats Q433_19065 SM00382 ATPases associated with a variety of cellular activities Q433_19175 SM00345 helix_turn_helix gluconate operon transcriptional repressor Q433_19175 SM00866 Q433_19175 Q433_19185 SM00347 helix_turn_helix multiple antibiotic resistance protein Q433_19205 SM00347 helix_turn_helix multiple antibiotic resistance protein Q433_19250 SM00382 ATPases associated with a variety of cellular activities Q433_19255 SM00487 DEAD-like helicases superfamily Q433_19255 SM00490 helicase superfamily c-terminal domain Q433_19295 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. Q433_19295 SM00245 tail specific protease Q433_19305 SM00382 ATPases associated with a variety of cellular activities Q433_19320 SM00937 Q433_19320 Q433_19330 SM00957 SecA DEAD-like domain Q433_19330 SM00958 SecA preprotein cross-linking domain Q433_19420 SM00487 DEAD-like helicases superfamily Q433_19420 SM00490 helicase superfamily c-terminal domain Q433_19430 SM00421 helix_turn_helix, Lux Regulon Q433_19430 SM00448 cheY-homologous receiver domain Q433_19435 SM00387 Histidine kinase-like ATPases Q433_19475 SM00984 UDP binding domain Q433_19500 SM00646 Q433_19500 Q433_19545 SM00382 ATPases associated with a variety of cellular activities Q433_19615 SM00047 Lysozyme subfamily 2 Q433_19615 SM00287 Bacterial SH3 domain homologues Q433_19670 SM00854 Bacterial capsule synthesis protein PGA_cap Q433_19695 SM00354 helix_turn _helix lactose operon repressor Q433_19710 SM00382 ATPases associated with a variety of cellular activities Q433_19725 SM00287 Bacterial SH3 domain homologues Q433_19780 SM00903 Flavin reductase like domain Q433_19795 SM00344 helix_turn_helix ASNC type Q433_19875 SM00984 UDP binding domain Q433_19905 SM00487 DEAD-like helicases superfamily Q433_19905 SM00490 helicase superfamily c-terminal domain Q433_19920 SM00420 helix_turn_helix, Deoxyribose operon repressor Q433_19920 SM01134 Q433_19920 Q433_19950 SM00387 Histidine kinase-like ATPases Q433_19965 SM00028 Tetratricopeptide repeats Q433_20000 SM00347 helix_turn_helix multiple antibiotic resistance protein Q433_20010 SM00710 Parallel beta-helix repeats Q433_20010 SM00722 Domain present in carbohydrate binding proteins and sugar hydrolses Q433_20040 SM00938 Nitrogen regulatory protein P-II Q433_20045 SM00014 Acid phosphatase homologues Q433_20085 SM00155 Phospholipase D. Active site motifs. Q433_20090 SM00422 helix_turn_helix, mercury resistance Q433_20145 SM00028 Tetratricopeptide repeats Q433_20155 SM00729 Elongator protein 3, MiaB family, Radical SAM Q433_20170 SM00327 von Willebrand factor (vWF) type A domain Q433_20180 SM00327 von Willebrand factor (vWF) type A domain Q433_20230 SM00382 ATPases associated with a variety of cellular activities Q433_20305 SM00226 Low molecular weight phosphatase family Q433_20345 SM00937 Q433_20345 Q433_20365 SM00919 Malic enzyme, NAD binding domain Q433_20365 SM01274 Q433_20365 Q433_20380 SM00357 Cold shock protein domain Q433_20380 SM00382 ATPases associated with a variety of cellular activities Q433_20380 SM00959 Rho termination factor, N-terminal domain Q433_20415 SM00448 cheY-homologous receiver domain Q433_20450 SM00155 Phospholipase D. Active site motifs. Q433_20470 SM00382 ATPases associated with a variety of cellular activities Q433_20475 SM00155 Phospholipase D. Active site motifs. Q433_20500 SM00926 Molybdopterin oxidoreductase Fe4S4 domain Q433_20520 SM00100 Cyclic nucleotide-monophosphate binding domain Q433_20520 SM00419 helix_turn_helix, cAMP Regulatory protein Q433_20530 SM00836 DALR anticodon binding domain Q433_20530 SM01016 Arginyl tRNA synthetase N terminal dom Q433_20545 SM00729 Elongator protein 3, MiaB family, Radical SAM Q433_20595 SM00028 Tetratricopeptide repeats Q433_20625 SM00382 ATPases associated with a variety of cellular activities Q433_20665 SM00347 helix_turn_helix multiple antibiotic resistance protein Q433_20670 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain Q433_20705 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. Q433_20815 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase Q433_20860 SM00858 Q433_20860 Q433_20920 SM00986 Uracil DNA glycosylase superfamily Q433_20920 SM00987 UreE urease accessory protein, C-terminal domain Q433_20940 SM00640 Glycosyl hydrolases family 32 Q433_20955 SM01061 CAT RNA binding domain Q433_21110 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase Q433_21155 SM01061 CAT RNA binding domain Q433_21170 SM00347 helix_turn_helix multiple antibiotic resistance protein Q433_21175 SM00363 S4 RNA-binding domain Q433_21185 SM00530 Helix-turn-helix XRE-family like proteins Q433_21200 SM00954 Region found in RelA / SpoT proteins Q433_21295 SM01060 Q433_21295 Q433_21310 SM00382 ATPases associated with a variety of cellular activities Q433_21345 SM00382 ATPases associated with a variety of cellular activities Q433_21350 SM00382 ATPases associated with a variety of cellular activities Q433_21385 SM00382 ATPases associated with a variety of cellular activities Q433_21445 SM00421 helix_turn_helix, Lux Regulon Q433_21445 SM00448 cheY-homologous receiver domain Q433_21490 SM00882 Coenzyme A transferase Q433_21495 SM00882 Coenzyme A transferase Q433_21535 SM01060 Q433_21535 Q433_21555 SM01061 CAT RNA binding domain Q433_21575 SM00487 DEAD-like helicases superfamily Q433_21575 SM00490 helicase superfamily c-terminal domain Q433_21650 SM00422 helix_turn_helix, mercury resistance Q433_21660 SM00752 Horizontally Transferred TransMembrane Domain Q433_21690 SM00860 SMI1 / KNR4 family Q433_21755 SM00941 Pyrimidine nucleoside phosphorylase C-terminal domain Q433_21765 SM01133 Q433_21765 Q433_21800 SM00382 ATPases associated with a variety of cellular activities Q433_21810 SM00062 Bacterial periplasmic substrate-binding proteins Q433_21885 SM00382 ATPases associated with a variety of cellular activities Q433_21890 SM00387 Histidine kinase-like ATPases Q433_21895 SM00448 cheY-homologous receiver domain Q433_21895 SM00862 Transcriptional regulatory protein, C terminal Q433_21950 SM00420 helix_turn_helix, Deoxyribose operon repressor Q433_21950 SM01134 Q433_21950 Q433_21980 SM00387 Histidine kinase-like ATPases Q433_22010 SM00564 beta-propeller repeat Q433_22045 SM00347 helix_turn_helix multiple antibiotic resistance protein Q433_22070 SM00345 helix_turn_helix gluconate operon transcriptional repressor Q433_22070 SM00895 Q433_22070 Q433_22085 SM01350 Q433_22085 Q433_22115 SM00345 helix_turn_helix gluconate operon transcriptional repressor Q433_22115 SM00866 Q433_22115 Q433_22140 SM00487 DEAD-like helicases superfamily Q433_22150 SM00857 Resolvase, N terminal domain Q433_22225 SM00091 PAS domain Q433_22225 SM00382 ATPases associated with a variety of cellular activities Q433_22230 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Q433_22230 SM00387 Histidine kinase-like ATPases Q433_22230 SM00388 His Kinase A (phosphoacceptor) domain Q433_22235 SM00448 cheY-homologous receiver domain Q433_22235 SM00862 Transcriptional regulatory protein, C terminal Q433_22250 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. Q433_22255 SM00849 Metallo-beta-lactamase superfamily Q433_22270 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) Q433_22270 SM00091 PAS domain Q433_22270 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Q433_22270 SM00387 Histidine kinase-like ATPases Q433_22270 SM00388 His Kinase A (phosphoacceptor) domain Q433_22275 SM00448 cheY-homologous receiver domain Q433_22275 SM00862 Transcriptional regulatory protein, C terminal Q433_22300 SM00788 Adenylosuccinate synthetase Q433_22315 SM00382 ATPases associated with a variety of cellular activities Q433_22355 SM00267 diguanylate cyclase Q433_22385 SM01131 Q433_22385 Q433_22410 SM00422 helix_turn_helix, mercury resistance Q433_22450 SM00849 Metallo-beta-lactamase superfamily Q433_22455 SM00347 helix_turn_helix multiple antibiotic resistance protein Q433_22510 SM01266 Q433_22510 Q433_22520 SM00354 helix_turn _helix lactose operon repressor Q433_22550 SM00926 Molybdopterin oxidoreductase Fe4S4 domain Q433_22570 SM00470 ParB-like nuclease domain Q433_22590 SM00470 ParB-like nuclease domain Q433_22600 SM01228 Q433_22600 Q433_22610 SM00322 K homology RNA-binding domain Q433_22610 SM00393 Putative single-stranded nucleic acids-binding domain Q433_22610 SM01245 Q433_22610