locus-tag class description HCN55_00005 PF11638 DnaA N-terminal domain HCN55_00005 PF00308 Bacterial dnaA protein HCN55_00005 PF08299 Bacterial dnaA protein helix-turn-helix HCN55_00010 PF02767 DNA polymerase III beta subunit, central domain HCN55_00010 PF02768 DNA polymerase III beta subunit, C-terminal domain HCN55_00010 PF00712 DNA polymerase III beta subunit, N-terminal domain HCN55_00020 PF02463 RecF/RecN/SMC N terminal domain HCN55_00025 PF04025 Domain of unknown function (DUF370) HCN55_00030 PF01751 Toprim domain HCN55_00030 PF00204 DNA gyrase B HCN55_00030 PF00986 DNA gyrase B subunit, carboxyl terminus HCN55_00030 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HCN55_00035 PF03989 DNA gyrase C-terminal domain, beta-propeller HCN55_00035 PF00521 DNA gyrase/topoisomerase IV, subunit A HCN55_00065 PF14175 YaaC-like Protein HCN55_00070 PF00478 IMP dehydrogenase / GMP reductase domain HCN55_00070 PF00571 CBS domain HCN55_00075 PF07943 Penicillin-binding protein 5, C-terminal domain HCN55_00075 PF00768 D-alanyl-D-alanine carboxypeptidase HCN55_00080 PF01680 SOR/SNZ family HCN55_00085 PF01174 SNO glutamine amidotransferase family HCN55_00090 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) HCN55_00090 PF02403 Seryl-tRNA synthetase N-terminal domain HCN55_00105 PF10704 Protein of unknown function (DUF2508) HCN55_00110 PF07441 SigmaK-factor processing regulatory protein BofA HCN55_00140 PF10764 Inhibitor of sigma-G Gin HCN55_00145 PF10112 5-bromo-4-chloroindolyl phosphate hydrolysis protein HCN55_00150 PF05816 Toxic anion resistance protein (TelA) HCN55_00155 PF01276 Orn/Lys/Arg decarboxylase, major domain HCN55_00155 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain HCN55_00160 PF02223 Thymidylate kinase HCN55_00165 PF06153 Cyclic-di-AMP receptor HCN55_00170 PF03885 Protein of unknown function (DUF327) HCN55_00175 PF09115 DNA polymerase III, delta subunit, C terminal HCN55_00180 PF04468 PSP1 C-terminal conserved region HCN55_00185 PF06156 Initiation control protein YabA HCN55_00190 PF05175 Methyltransferase small domain HCN55_00195 PF01541 GIY-YIG catalytic domain HCN55_00200 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases HCN55_00205 PF18277 AbrB C-terminal domain HCN55_00205 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin HCN55_00210 PF01588 Putative tRNA binding domain HCN55_00210 PF09334 tRNA synthetases class I (M) HCN55_00210 PF08264 Anticodon-binding domain of tRNA HCN55_00215 PF01026 TatD related DNase HCN55_00220 PF06725 3D domain HCN55_00220 PF03990 G5-linked-Ubiquitin-like domain HCN55_00220 PF07501 G5 domain HCN55_00225 PF13331 Domain of unknown function (DUF4093) HCN55_00225 PF13662 Toprim domain HCN55_00230 PF00398 Ribosomal RNA adenine dimethylase HCN55_00235 PF05582 YabG peptidase U57 HCN55_00240 PF06257 Biofilm formation stimulator VEG HCN55_00245 PF00269 Small, acid-soluble spore proteins, alpha/beta type HCN55_00250 PF08544 GHMP kinases C terminal HCN55_00250 PF00288 GHMP kinases N terminal domain HCN55_00255 PF09182 Bacterial purine repressor, N-terminal HCN55_00255 PF00156 Phosphoribosyl transferase domain HCN55_00260 PF01042 Endoribonuclease L-PSP HCN55_00265 PF04026 SpoVG HCN55_00270 PF00132 Bacterial transferase hexapeptide (six repeats) HCN55_00270 PF00483 Nucleotidyl transferase HCN55_00275 PF14572 Phosphoribosyl synthetase-associated domain HCN55_00275 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase HCN55_00280 PF01386 Ribosomal L25p family HCN55_00280 PF14693 Ribosomal protein TL5, C-terminal domain HCN55_00285 PF01195 Peptidyl-tRNA hydrolase HCN55_00290 PF10955 Protein of unknown function (DUF2757) HCN55_00295 PF02559 CarD-like/TRCF domain HCN55_00295 PF17757 UvrB interaction domain HCN55_00295 PF03461 TRCF domain HCN55_00295 PF00271 Helicase conserved C-terminal domain HCN55_00295 PF00270 DEAD/DEAH box helicase HCN55_00300 PF15714 Stage V sporulation protein T C-terminal, transcription factor HCN55_00300 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin HCN55_00305 PF14667 Polysaccharide biosynthesis C-terminal domain HCN55_00305 PF01943 Polysaccharide biosynthesis protein HCN55_00310 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases HCN55_00310 PF03819 MazG nucleotide pyrophosphohydrolase domain HCN55_00315 PF01479 S4 domain HCN55_00320 PF07873 YabP family HCN55_00325 PF09578 Spore cortex protein YabQ (Spore_YabQ) HCN55_00330 PF04977 Septum formation initiator HCN55_00335 PF00575 S1 RNA binding domain HCN55_00350 PF07228 Stage II sporulation protein E (SpoIIE) HCN55_00355 PF00092 von Willebrand factor type A domain HCN55_00360 PF00069 Protein kinase domain HCN55_00365 PF01171 PP-loop family HCN55_00365 PF09179 TilS substrate binding domain HCN55_00365 PF11734 TilS substrate C-terminal domain HCN55_00375 PF06480 FtsH Extracellular HCN55_00375 PF17862 AAA+ lid domain HCN55_00375 PF00004 ATPase family associated with various cellular activities (AAA) HCN55_00375 PF01434 Peptidase family M41 HCN55_00380 PF03309 Type III pantothenate kinase HCN55_00385 PF01430 Hsp33 protein HCN55_00390 PF13145 PPIC-type PPIASE domain HCN55_00395 PF00291 Pyridoxal-phosphate dependent enzyme HCN55_00400 PF04715 Anthranilate synthase component I, N terminal region HCN55_00400 PF00425 chorismate binding enzyme HCN55_00405 PF00117 Glutamine amidotransferase class-I HCN55_00410 PF01063 Amino-transferase class IV HCN55_00415 PF00809 Pterin binding enzyme HCN55_00420 PF02152 Dihydroneopterin aldolase HCN55_00425 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) HCN55_00430 PF01381 Helix-turn-helix HCN55_00435 PF01207 Dihydrouridine synthase (Dus) HCN55_00440 PF00152 tRNA synthetases class II (D, K and N) HCN55_00440 PF01336 OB-fold nucleic acid binding domain HCN55_00520 PF17727 CtsR C-terminal dimerization domain HCN55_00520 PF05848 CtsR N-terminal HTH domain HCN55_00525 PF02151 UvrB/uvrC motif HCN55_00530 PF00217 ATP:guanido phosphotransferase, C-terminal catalytic domain HCN55_00535 PF02861 Clp amino terminal domain, pathogenicity island component HCN55_00535 PF00004 ATPase family associated with various cellular activities (AAA) HCN55_00535 PF07724 AAA domain (Cdc48 subfamily) HCN55_00535 PF17871 AAA lid domain HCN55_00535 PF10431 C-terminal, D2-small domain, of ClpB protein HCN55_00540 PF18073 Rubredoxin metal binding domain HCN55_00545 PF10635 DisA bacterial checkpoint controller linker region HCN55_00545 PF02457 DisA bacterial checkpoint controller nucleotide-binding HCN55_00555 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase HCN55_00560 PF02542 YgbB family HCN55_00565 PF00749 tRNA synthetases class I (E and Q), catalytic domain HCN55_00570 PF06426 Serine acetyltransferase, N-terminal HCN55_00570 PF00132 Bacterial transferase hexapeptide (six repeats) HCN55_00575 PF09190 DALR domain HCN55_00575 PF01406 tRNA synthetases class I (C) catalytic domain HCN55_00580 PF00636 Ribonuclease III domain HCN55_00585 PF08032 RNA 2'-O ribose methyltransferase substrate binding HCN55_00585 PF00588 SpoU rRNA Methylase family HCN55_00590 PF05991 YacP-like NYN domain HCN55_00595 PF08281 Sigma-70, region 4 HCN55_00595 PF04542 Sigma-70 region 2 HCN55_00600 PF00471 Ribosomal protein L33 HCN55_00605 PF00584 SecE/Sec61-gamma subunits of protein translocation complex HCN55_00610 PF02357 Transcription termination factor nusG HCN55_00610 PF00467 KOW motif HCN55_00615 PF00298 Ribosomal protein L11, RNA binding domain HCN55_00615 PF03946 Ribosomal protein L11, N-terminal domain HCN55_00620 PF00687 Ribosomal protein L1p/L10e family HCN55_00625 PF00466 Ribosomal protein L10 HCN55_00630 PF00542 Ribosomal protein L7/L12 C-terminal domain HCN55_00630 PF16320 Ribosomal protein L7/L12 dimerisation domain HCN55_00635 PF05175 Methyltransferase small domain HCN55_00640 PF04560 RNA polymerase Rpb2, domain 7 HCN55_00640 PF04561 RNA polymerase Rpb2, domain 2 HCN55_00640 PF04565 RNA polymerase Rpb2, domain 3 HCN55_00640 PF10385 RNA polymerase beta subunit external 1 domain HCN55_00640 PF00562 RNA polymerase Rpb2, domain 6 HCN55_00640 PF04563 RNA polymerase beta subunit HCN55_00645 PF05000 RNA polymerase Rpb1, domain 4 HCN55_00645 PF04998 RNA polymerase Rpb1, domain 5 HCN55_00645 PF04997 RNA polymerase Rpb1, domain 1 HCN55_00645 PF00623 RNA polymerase Rpb1, domain 2 HCN55_00645 PF04983 RNA polymerase Rpb1, domain 3 HCN55_00650 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family HCN55_00655 PF00164 Ribosomal protein S12/S23 HCN55_00660 PF00177 Ribosomal protein S7p/S5e HCN55_00665 PF03144 Elongation factor Tu domain 2 HCN55_00665 PF00679 Elongation factor G C-terminus HCN55_00665 PF03764 Elongation factor G, domain IV HCN55_00665 PF00009 Elongation factor Tu GTP binding domain HCN55_00665 PF14492 Elongation Factor G, domain II HCN55_00670 PF03143 Elongation factor Tu C-terminal domain HCN55_00670 PF00009 Elongation factor Tu GTP binding domain HCN55_00670 PF03144 Elongation factor Tu domain 2 HCN55_00675 PF12146 Serine aminopeptidase, S33 HCN55_00680 PF00338 Ribosomal protein S10p/S20e HCN55_00685 PF00297 Ribosomal protein L3 HCN55_00690 PF00573 Ribosomal protein L4/L1 family HCN55_00695 PF00276 Ribosomal protein L23 HCN55_00700 PF00181 Ribosomal Proteins L2, RNA binding domain HCN55_00700 PF03947 Ribosomal Proteins L2, C-terminal domain HCN55_00705 PF00203 Ribosomal protein S19 HCN55_00710 PF00237 Ribosomal protein L22p/L17e HCN55_00715 PF00189 Ribosomal protein S3, C-terminal domain HCN55_00715 PF07650 KH domain HCN55_00720 PF00252 Ribosomal protein L16p/L10e HCN55_00725 PF00831 Ribosomal L29 protein HCN55_00730 PF00366 Ribosomal protein S17 HCN55_00735 PF00238 Ribosomal protein L14p/L23e HCN55_00740 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 HCN55_00740 PF00467 KOW motif HCN55_00745 PF00673 ribosomal L5P family C-terminus HCN55_00745 PF00281 Ribosomal protein L5 HCN55_00750 PF00253 Ribosomal protein S14p/S29e HCN55_00755 PF00410 Ribosomal protein S8 HCN55_00760 PF00347 Ribosomal protein L6 HCN55_00765 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast HCN55_00770 PF00333 Ribosomal protein S5, N-terminal domain HCN55_00770 PF03719 Ribosomal protein S5, C-terminal domain HCN55_00775 PF00327 Ribosomal protein L30p/L7e HCN55_00780 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A HCN55_00785 PF00344 SecY translocase HCN55_00790 PF05191 Adenylate kinase, active site lid HCN55_00795 PF00557 Metallopeptidase family M24 HCN55_00805 PF01176 Translation initiation factor 1A / IF-1 HCN55_00810 PF00444 Ribosomal protein L36 HCN55_00815 PF00416 Ribosomal protein S13/S18 HCN55_00820 PF00411 Ribosomal protein S11 HCN55_00825 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain HCN55_00825 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain HCN55_00825 PF01000 RNA polymerase Rpb3/RpoA insert domain HCN55_00830 PF01196 Ribosomal protein L17 HCN55_00835 PF00005 ABC transporter HCN55_00840 PF00005 ABC transporter HCN55_00845 PF02361 Cobalt transport protein HCN55_00850 PF01416 tRNA pseudouridine synthase HCN55_00855 PF00572 Ribosomal protein L13 HCN55_00860 PF00380 Ribosomal protein S9/S16 HCN55_00865 PF08241 Methyltransferase domain HCN55_00870 PF10730 Protein of unknown function (DUF2521) HCN55_00875 PF01520 N-acetylmuramoyl-L-alanine amidase HCN55_00880 PF10609 NUBPL iron-transfer P-loop NTPase HCN55_00885 PF17898 Spore germination GerD central core domain HCN55_00890 PF14089 KinB-signalling pathway activation in sporulation HCN55_00895 PF01522 Polysaccharide deacetylase HCN55_00975 PF01740 STAS domain HCN55_00975 PF00916 Sulfate permease family HCN55_00980 PF01758 Sodium Bile acid symporter family HCN55_00985 PF00756 Putative esterase HCN55_00990 PF01032 FecCD transport family HCN55_00995 PF01032 FecCD transport family HCN55_01000 PF01497 Periplasmic binding protein HCN55_01005 PF01497 Periplasmic binding protein HCN55_01005 PF12833 Helix-turn-helix domain HCN55_01010 PF07075 Protein of unknown function (DUF1343) HCN55_01015 PF01915 Glycosyl hydrolase family 3 C-terminal domain HCN55_01015 PF00933 Glycosyl hydrolase family 3 N terminal domain HCN55_01020 PF00144 Beta-lactamase HCN55_01025 PF02378 Phosphotransferase system, EIIC HCN55_01025 PF00367 phosphotransferase system, EIIB HCN55_01030 PF01380 SIS domain HCN55_01030 PF01418 Helix-turn-helix domain, rpiR family HCN55_01035 PF01380 SIS domain HCN55_01045 PF04463 Protein of unknown function (DUF523) HCN55_01075 PF04542 Sigma-70 region 2 HCN55_01075 PF08281 Sigma-70, region 4 HCN55_01080 PF13490 Putative zinc-finger HCN55_01085 PF02457 DisA bacterial checkpoint controller nucleotide-binding HCN55_01090 PF07949 YbbR-like protein HCN55_01095 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I HCN55_01095 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II HCN55_01095 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III HCN55_01095 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain HCN55_01100 PF01380 SIS domain HCN55_01110 PF00730 HhH-GPD superfamily base excision DNA repair protein HCN55_01110 PF07934 8-oxoguanine DNA glycosylase, N-terminal domain HCN55_01115 PF02805 Metal binding domain of Ada HCN55_01115 PF12833 Helix-turn-helix domain HCN55_01120 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain HCN55_01120 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain HCN55_01125 PF00361 Proton-conducting membrane transporter HCN55_01125 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus HCN55_01130 PF10070 Uncharacterized protein conserved in bacteria (DUF2309) HCN55_01145 PF10057 Uncharacterized conserved protein (DUF2294) HCN55_01155 PF07690 Major Facilitator Superfamily HCN55_01170 PF04055 Radical SAM superfamily HCN55_01170 PF13186 Iron-sulfur cluster-binding domain HCN55_01175 PF02517 CPBP intramembrane metalloprotease HCN55_01180 PF00005 ABC transporter HCN55_01195 PF13905 Thioredoxin-like HCN55_01200 PF00561 alpha/beta hydrolase fold HCN55_01205 PF00072 Response regulator receiver domain HCN55_01205 PF00486 Transcriptional regulatory protein, C terminal HCN55_01210 PF00672 HAMP domain HCN55_01210 PF00512 His Kinase A (phospho-acceptor) domain HCN55_01220 PF00069 Protein kinase domain HCN55_01230 PF16226 Domain of unknown function (DUF4885) HCN55_01235 PF00324 Amino acid permease HCN55_01240 PF17334 Minor curli fiber component A HCN55_01245 PF17340 Family of unknown function (DUF5370) HCN55_01250 PF00905 Penicillin binding protein transpeptidase domain HCN55_01255 PF00067 Cytochrome P450 HCN55_01265 PF13520 Amino acid permease HCN55_01270 PF03009 Glycerophosphoryl diester phosphodiesterase family HCN55_01275 PF07690 Major Facilitator Superfamily HCN55_01280 PF10852 Protein of unknown function (DUF2651) HCN55_01285 PF01047 MarR family HCN55_01285 PF00583 Acetyltransferase (GNAT) family HCN55_01290 PF07690 Major Facilitator Superfamily HCN55_01300 PF08924 Domain of unknown function (DUF1906) HCN55_01300 PF01471 Putative peptidoglycan binding domain HCN55_01305 PF00892 EamA-like transporter family HCN55_01310 PF02311 AraC-like ligand binding domain HCN55_01310 PF12833 Helix-turn-helix domain HCN55_01315 PF02222 ATP-grasp domain HCN55_01320 PF00089 Trypsin HCN55_01325 PF10794 Protein of unknown function (DUF2606) HCN55_01330 PF12697 Alpha/beta hydrolase family HCN55_01335 PF01066 CDP-alcohol phosphatidyltransferase HCN55_01340 PF09335 SNARE associated Golgi protein HCN55_01345 PF02666 Phosphatidylserine decarboxylase HCN55_01355 PF05139 Erythromycin esterase HCN55_01360 PF12833 Helix-turn-helix domain HCN55_01370 PF00375 Sodium:dicarboxylate symporter family HCN55_01375 PF02378 Phosphotransferase system, EIIC HCN55_01375 PF00367 phosphotransferase system, EIIB HCN55_01375 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 HCN55_01380 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase HCN55_01385 PF00392 Bacterial regulatory proteins, gntR family HCN55_01385 PF07702 UTRA domain HCN55_01390 PF07853 Protein of unknown function (DUF1648) HCN55_01395 PF01063 Amino-transferase class IV HCN55_01400 PF00324 Amino acid permease HCN55_01405 PF02574 Homocysteine S-methyltransferase HCN55_01415 PF01235 Sodium:alanine symporter family HCN55_01420 PF04960 Glutaminase HCN55_01425 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HCN55_01430 PF08664 YcbB domain HCN55_01430 PF00072 Response regulator receiver domain HCN55_01435 PF00701 Dihydrodipicolinate synthetase family HCN55_01440 PF00171 Aldehyde dehydrogenase family HCN55_01445 PF07690 Major Facilitator Superfamily HCN55_01450 PF13378 Enolase C-terminal domain-like HCN55_01455 PF07729 FCD domain HCN55_01455 PF00392 Bacterial regulatory proteins, gntR family HCN55_01460 PF08666 SAF domain HCN55_01460 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus HCN55_01465 PF01636 Phosphotransferase enzyme family HCN55_01470 PF15777 Tryptophan RNA-binding attenuator protein inhibitory protein HCN55_01475 PF00892 EamA-like transporter family HCN55_01480 PF00486 Transcriptional regulatory protein, C terminal HCN55_01480 PF00072 Response regulator receiver domain HCN55_01485 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HCN55_01485 PF00512 His Kinase A (phospho-acceptor) domain HCN55_01490 PF00005 ABC transporter HCN55_01505 PF10710 Protein of unknown function (DUF2512) HCN55_01510 PF07486 Cell Wall Hydrolase HCN55_01515 PF10138 vWA found in TerF C terminus HCN55_01525 PF09423 PhoD-like phosphatase HCN55_01525 PF16655 PhoD-like phosphatase, N-terminal domain HCN55_01530 PF02416 mttA/Hcf106 family HCN55_01535 PF00902 Sec-independent protein translocase protein (TatC) HCN55_01540 PF01470 Pyroglutamyl peptidase HCN55_01545 PF00266 Aminotransferase class-V HCN55_01550 PF07690 Major Facilitator Superfamily HCN55_01555 PF00440 Bacterial regulatory proteins, tetR family HCN55_01560 PF00710 Asparaginase, N-terminal HCN55_01560 PF17763 Glutaminase/Asparaginase C-terminal domain HCN55_01565 PF01674 Lipase (class 2) HCN55_01570 PF06271 RDD family HCN55_01575 PF05225 helix-turn-helix, Psq domain HCN55_01575 PF02810 SEC-C motif HCN55_01580 PF14501 GHKL domain HCN55_01585 PF04397 LytTr DNA-binding domain HCN55_01585 PF00072 Response regulator receiver domain HCN55_01590 PF00005 ABC transporter HCN55_01595 PF12679 ABC-2 family transporter protein HCN55_01600 PF00248 Aldo/keto reductase family HCN55_01605 PF17118 Domain of unknown function (DUF5105) HCN55_01605 PF11611 Domain of unknown function (DUF4352) HCN55_01615 PF16244 Domain of unknown function (DUF4901) HCN55_01620 PF16244 Domain of unknown function (DUF4901) HCN55_01625 PF13539 D-alanyl-D-alanine carboxypeptidase HCN55_01630 PF18801 response regulator aspartate phosphatase H, N terminal HCN55_01640 PF00128 Alpha amylase, catalytic domain HCN55_01645 PF01297 Zinc-uptake complex component A periplasmic HCN55_01650 PF00005 ABC transporter HCN55_01655 PF00950 ABC 3 transport family HCN55_01660 PF00296 Luciferase-like monooxygenase HCN55_01665 PF02342 TerD domain HCN55_01670 PF02342 TerD domain HCN55_01675 PF02342 TerD domain HCN55_01680 PF03741 Integral membrane protein TerC family HCN55_01685 PF14266 Putative component of 'biosynthetic module' HCN55_01690 PF05816 Toxic anion resistance protein (TelA) HCN55_01695 PF07690 Major Facilitator Superfamily HCN55_01700 PF07690 Major Facilitator Superfamily HCN55_01710 PF00005 ABC transporter HCN55_01710 PF00571 CBS domain HCN55_01715 PF00528 Binding-protein-dependent transport system inner membrane component HCN55_01720 PF04069 Substrate binding domain of ABC-type glycine betaine transport system HCN55_01730 PF03606 C4-dicarboxylate anaerobic carrier HCN55_01740 PF00128 Alpha amylase, catalytic domain HCN55_01740 PF16738 Starch-binding module 26 HCN55_01745 PF00056 lactate/malate dehydrogenase, NAD binding domain HCN55_01745 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain HCN55_01750 PF02652 L-lactate permease HCN55_01755 PF07690 Major Facilitator Superfamily HCN55_01760 PF01047 MarR family HCN55_01765 PF01810 LysE type translocator HCN55_01770 PF08892 YqcI/YcgG family HCN55_01775 PF00324 Amino acid permease HCN55_01780 PF09347 Domain of unknown function (DUF1989) HCN55_01785 PF02540 NAD synthase HCN55_01795 PF01202 Shikimate kinase HCN55_01800 PF08241 Methyltransferase domain HCN55_01805 PF03466 LysR substrate binding domain HCN55_01805 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HCN55_01810 PF05448 Acetyl xylan esterase (AXE1) HCN55_01815 PF10127 RNA repair pathway DNA polymerase beta family HCN55_01820 PF01619 Proline dehydrogenase HCN55_01825 PF00171 Aldehyde dehydrogenase family HCN55_01830 PF00474 Sodium:solute symporter family HCN55_01835 PF17853 GGDEF-like domain HCN55_01835 PF13556 PucR C-terminal helix-turn-helix domain HCN55_01840 PF09323 Domain of unknown function (DUF1980) HCN55_01845 PF03773 Predicted permease HCN55_01850 PF00561 alpha/beta hydrolase fold HCN55_01855 PF07992 Pyridine nucleotide-disulphide oxidoreductase HCN55_01860 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases HCN55_01865 PF00355 Rieske [2Fe-2S] domain HCN55_01870 PF01077 Nitrite and sulphite reductase 4Fe-4S domain HCN55_01870 PF18267 Rubredoxin NAD+ reductase C-terminal domain HCN55_01870 PF04324 BFD-like [2Fe-2S] binding domain HCN55_01870 PF07992 Pyridine nucleotide-disulphide oxidoreductase HCN55_01870 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain HCN55_01875 PF04879 Molybdopterin oxidoreductase Fe4S4 domain HCN55_01875 PF00384 Molybdopterin oxidoreductase HCN55_01875 PF01568 Molydopterin dinucleotide binding domain HCN55_01880 PF07992 Pyridine nucleotide-disulphide oxidoreductase HCN55_01880 PF18267 Rubredoxin NAD+ reductase C-terminal domain HCN55_01880 PF04324 BFD-like [2Fe-2S] binding domain HCN55_01880 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain HCN55_01885 PF07690 Major Facilitator Superfamily HCN55_01890 PF02649 Type I GTP cyclohydrolase folE2 HCN55_01895 PF03734 L,D-transpeptidase catalytic domain HCN55_01905 PF07683 Cobalamin synthesis protein cobW C-terminal domain HCN55_01905 PF02492 CobW/HypB/UreG, nucleotide-binding domain HCN55_01910 PF00528 Binding-protein-dependent transport system inner membrane component HCN55_01915 PF00497 Bacterial extracellular solute-binding proteins, family 3 HCN55_01925 PF06271 RDD family HCN55_01930 PF10925 Protein of unknown function (DUF2680) HCN55_01935 PF00232 Glycosyl hydrolase family 1 HCN55_01940 PF11033 Competence protein J (ComJ) HCN55_01945 PF14040 Deoxyribonuclease NucA/NucB HCN55_01950 PF00672 HAMP domain HCN55_01950 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HCN55_01950 PF17202 Single cache domain 3 HCN55_01955 PF01380 SIS domain HCN55_01960 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family HCN55_01965 PF01638 HxlR-like helix-turn-helix HCN55_01970 PF00668 Condensation domain HCN55_01970 PF00501 AMP-binding enzyme HCN55_01970 PF00550 Phosphopantetheine attachment site HCN55_01970 PF13193 AMP-binding enzyme C-terminal domain HCN55_01975 PF00501 AMP-binding enzyme HCN55_01975 PF00550 Phosphopantetheine attachment site HCN55_01975 PF13193 AMP-binding enzyme C-terminal domain HCN55_01975 PF00668 Condensation domain HCN55_01980 PF00975 Thioesterase domain HCN55_01980 PF00550 Phosphopantetheine attachment site HCN55_01980 PF13193 AMP-binding enzyme C-terminal domain HCN55_01980 PF00501 AMP-binding enzyme HCN55_01980 PF00668 Condensation domain HCN55_01985 PF00975 Thioesterase domain HCN55_01990 PF07690 Major Facilitator Superfamily HCN55_01995 PF14317 YcxB-like protein HCN55_02000 PF00892 EamA-like transporter family HCN55_02005 PF00155 Aminotransferase class I and II HCN55_02005 PF00392 Bacterial regulatory proteins, gntR family HCN55_02020 PF00005 ABC transporter HCN55_02025 PF00528 Binding-protein-dependent transport system inner membrane component HCN55_02030 PF00497 Bacterial extracellular solute-binding proteins, family 3 HCN55_02035 PF03466 LysR substrate binding domain HCN55_02035 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HCN55_02040 PF02441 Flavoprotein HCN55_02045 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase HCN55_02060 PF00561 alpha/beta hydrolase fold HCN55_02065 PF00854 POT family HCN55_02070 PF13229 Right handed beta helix region HCN55_02070 PF12708 Pectate lyase superfamily protein HCN55_02080 PF03323 Bacillus/Clostridium GerA spore germination protein HCN55_02085 PF05504 Spore germination B3/ GerAC like, C-terminal HCN55_02090 PF03845 Spore germination protein HCN55_02095 PF00005 ABC transporter HCN55_02100 PF12704 MacB-like periplasmic core domain HCN55_02100 PF02687 FtsX-like permease family HCN55_02105 PF00486 Transcriptional regulatory protein, C terminal HCN55_02105 PF00072 Response regulator receiver domain HCN55_02110 PF00512 His Kinase A (phospho-acceptor) domain HCN55_02110 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HCN55_02110 PF00672 HAMP domain HCN55_02115 PF18801 response regulator aspartate phosphatase H, N terminal HCN55_02120 PF11131 Rap-phr extracellular signalling HCN55_02125 PF09680 Family of unknown function HCN55_02130 PF09680 Family of unknown function HCN55_02135 PF00696 Amino acid kinase family HCN55_02135 PF13840 ACT domain HCN55_02140 PF01032 FecCD transport family HCN55_02145 PF01032 FecCD transport family HCN55_02150 PF00005 ABC transporter HCN55_02155 PF01497 Periplasmic binding protein HCN55_02160 PF07690 Major Facilitator Superfamily HCN55_02165 PF00440 Bacterial regulatory proteins, tetR family HCN55_02170 PF00881 Nitroreductase family HCN55_02175 PF03992 Antibiotic biosynthesis monooxygenase HCN55_02180 PF01022 Bacterial regulatory protein, arsR family HCN55_02185 PF00392 Bacterial regulatory proteins, gntR family HCN55_02185 PF00155 Aminotransferase class I and II HCN55_02190 PF00202 Aminotransferase class-III HCN55_02195 PF00171 Aldehyde dehydrogenase family HCN55_02200 PF06800 Sugar transport protein HCN55_02210 PF07987 Domain of unkown function (DUF1775) HCN55_02215 PF13115 YtkA-like HCN55_02215 PF04234 CopC domain HCN55_02215 PF05425 Copper resistance protein D HCN55_02220 PF05573 NosL HCN55_02220 PF08220 DeoR-like helix-turn-helix domain HCN55_02230 PF02378 Phosphotransferase system, EIIC HCN55_02230 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit HCN55_02235 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 HCN55_02240 PF08125 Mannitol dehydrogenase C-terminal domain HCN55_02240 PF01232 Mannitol dehydrogenase Rossmann domain HCN55_02245 PF00180 Isocitrate/isopropylmalate dehydrogenase HCN55_02250 PF10502 Signal peptidase, peptidase S26 HCN55_02255 PF01738 Dienelactone hydrolase family HCN55_02260 PF07977 FabA-like domain HCN55_02275 PF03746 LamB/YcsF family HCN55_02280 PF01566 Natural resistance-associated macrophage protein HCN55_02285 PF07286 Protein of unknown function (DUF1445) HCN55_02290 PF02682 Carboxyltransferase domain, subdomain C and D HCN55_02295 PF02626 Carboxyltransferase domain, subdomain A and B HCN55_02300 PF01614 Bacterial transcriptional regulator HCN55_02300 PF09339 IclR helix-turn-helix domain HCN55_02305 PF13472 GDSL-like Lipase/Acylhydrolase family HCN55_02310 PF13129 Protein of unknown function (DUF3953) HCN55_02315 PF03992 Antibiotic biosynthesis monooxygenase HCN55_02320 PF05223 NTF2-like N-terminal transpeptidase domain HCN55_02320 PF00905 Penicillin binding protein transpeptidase domain HCN55_02320 PF03717 Penicillin-binding Protein dimerisation domain HCN55_02325 PF00248 Aldo/keto reductase family HCN55_02330 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit HCN55_02330 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 HCN55_02330 PF00874 PRD domain HCN55_02330 PF05043 Mga helix-turn-helix domain HCN55_02330 PF08279 HTH domain HCN55_02335 PF13193 AMP-binding enzyme C-terminal domain HCN55_02335 PF00501 AMP-binding enzyme HCN55_02340 PF13649 Methyltransferase domain HCN55_02355 PF13302 Acetyltransferase (GNAT) domain HCN55_02360 PF16242 Pyridoxamine 5'-phosphate oxidase like HCN55_02365 PF10997 Alternate to MurJ HCN55_02370 PF12823 Domain of unknown function (DUF3817) HCN55_02375 PF01037 Lrp/AsnC ligand binding domain HCN55_02380 PF01751 Toprim domain HCN55_02380 PF01131 DNA topoisomerase HCN55_02390 PF00990 Diguanylate cyclase, GGDEF domain HCN55_02395 PF10096 Uncharacterized protein conserved in bacteria (DUF2334) HCN55_02405 PF03170 Bacterial cellulose synthase subunit HCN55_02410 PF13520 Amino acid permease HCN55_02415 PF00293 NUDIX domain HCN55_02420 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain HCN55_02420 PF00205 Thiamine pyrophosphate enzyme, central domain HCN55_02420 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain HCN55_02435 PF01566 Natural resistance-associated macrophage protein HCN55_02440 PF04226 Transglycosylase associated protein HCN55_02445 PF09954 Uncharacterized protein conserved in bacteria (DUF2188) HCN55_02450 PF12787 EcsC protein family HCN55_02455 PF00477 Small hydrophilic plant seed protein HCN55_02455 PF10685 Stress-induced bacterial acidophilic repeat motif HCN55_02460 PF07883 Cupin domain HCN55_02465 PF16291 Domain of unknown function (DUF4937 HCN55_02470 PF05067 Manganese containing catalase HCN55_02475 PF03480 Bacterial extracellular solute-binding protein, family 7 HCN55_02480 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain HCN55_02480 PF17203 Single cache domain 3 HCN55_02480 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HCN55_02485 PF00072 Response regulator receiver domain HCN55_02485 PF08279 HTH domain HCN55_02490 PF00375 Sodium:dicarboxylate symporter family HCN55_02495 PF01594 AI-2E family transporter HCN55_02500 PF00005 ABC transporter HCN55_02515 PF02770 Acyl-CoA dehydrogenase, middle domain HCN55_02515 PF02771 Acyl-CoA dehydrogenase, N-terminal domain HCN55_02515 PF08028 Acyl-CoA dehydrogenase, C-terminal domain HCN55_02520 PF13040 Fur-regulated basic protein B HCN55_02530 PF01545 Cation efflux family HCN55_02530 PF16916 Dimerisation domain of Zinc Transporter HCN55_02535 PF00085 Thioredoxin HCN55_02540 PF07478 D-ala D-ala ligase C-terminus HCN55_02540 PF01820 D-ala D-ala ligase N-terminus HCN55_02545 PF08245 Mur ligase middle domain HCN55_02545 PF02875 Mur ligase family, glutamate ligase domain HCN55_02545 PF01225 Mur ligase family, catalytic domain HCN55_02550 PF00271 Helicase conserved C-terminal domain HCN55_02550 PF00270 DEAD/DEAH box helicase HCN55_02555 PF03703 Bacterial PH domain HCN55_02560 PF03703 Bacterial PH domain HCN55_02565 PF01694 Rhomboid family HCN55_02570 PF01648 4'-phosphopantetheinyl transferase superfamily HCN55_02580 PF01168 Alanine racemase, N-terminal domain HCN55_02580 PF00842 Alanine racemase, C-terminal domain HCN55_02585 PF01402 Ribbon-helix-helix protein, copG family HCN55_02590 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system HCN55_02595 PF01740 STAS domain HCN55_02595 PF08678 Rsbr N terminal HCN55_02600 PF01740 STAS domain HCN55_02605 PF13581 Histidine kinase-like ATPase domain HCN55_02610 PF07228 Stage II sporulation protein E (SpoIIE) HCN55_02610 PF08673 Phosphoserine phosphatase RsbU, N-terminal domain HCN55_02615 PF01740 STAS domain HCN55_02620 PF13581 Histidine kinase-like ATPase domain HCN55_02625 PF04545 Sigma-70, region 4 HCN55_02625 PF04539 Sigma-70 region 3 HCN55_02625 PF04542 Sigma-70 region 2 HCN55_02630 PF07228 Stage II sporulation protein E (SpoIIE) HCN55_02645 PF01878 EVE domain HCN55_02650 PF01047 MarR family HCN55_02655 PF09371 Tex-like protein N-terminal domain HCN55_02655 PF16921 Tex protein YqgF-like domain HCN55_02655 PF17674 HHH domain HCN55_02655 PF00575 S1 RNA binding domain HCN55_02665 PF17283 SprT-like zinc ribbon domain HCN55_02665 PF10263 SprT-like family HCN55_02705 PF14659 Phage integrase, N-terminal SAM-like domain HCN55_02705 PF00589 Phage integrase family HCN55_02710 PF06114 IrrE N-terminal-like domain HCN55_02715 PF01381 Helix-turn-helix HCN55_02740 PF06125 Bacterial protein of unknown function (DUF961) HCN55_02750 PF18106 Rolling Circle replication initiation protein N-terminal domain HCN55_02750 PF02486 Replication initiation factor HCN55_02770 PF12642 Conjugative transposon protein TcpC HCN55_02780 PF12648 TcpE family HCN55_02790 PF08960 Domain of unknown function (DUF1874) HCN55_02800 PF00877 NlpC/P60 family HCN55_02810 PF14729 Domain of unknown function with cystatin-like fold (DUF4467) HCN55_02815 PF13676 TIR domain HCN55_02820 PF18801 response regulator aspartate phosphatase H, N terminal HCN55_02835 PF00296 Luciferase-like monooxygenase HCN55_02840 PF01037 Lrp/AsnC ligand binding domain HCN55_02845 PF01037 Lrp/AsnC ligand binding domain HCN55_02850 PF00857 Isochorismatase family HCN55_02855 PF12706 Beta-lactamase superfamily domain HCN55_02860 PF07690 Major Facilitator Superfamily HCN55_02860 PF00083 Sugar (and other) transporter HCN55_02880 PF01965 DJ-1/PfpI family HCN55_02885 PF00313 'Cold-shock' DNA-binding domain HCN55_02900 PF12833 Helix-turn-helix domain HCN55_02900 PF02311 AraC-like ligand binding domain HCN55_02905 PF00892 EamA-like transporter family HCN55_02910 PF12833 Helix-turn-helix domain HCN55_02910 PF06445 GyrI-like small molecule binding domain HCN55_02915 PF00392 Bacterial regulatory proteins, gntR family HCN55_02915 PF00155 Aminotransferase class I and II HCN55_02920 PF07690 Major Facilitator Superfamily HCN55_02930 PF08818 Domain of unknown function (DU1801) HCN55_02940 PF00892 EamA-like transporter family HCN55_02945 PF00155 Aminotransferase class I and II HCN55_02945 PF00392 Bacterial regulatory proteins, gntR family HCN55_02950 PF01575 MaoC like domain HCN55_02955 PF06821 Serine hydrolase HCN55_02960 PF01638 HxlR-like helix-turn-helix HCN55_02965 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 HCN55_02965 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) HCN55_02970 PF01638 HxlR-like helix-turn-helix HCN55_02975 PF02525 Flavodoxin-like fold HCN55_02980 PF07690 Major Facilitator Superfamily HCN55_02985 PF00440 Bacterial regulatory proteins, tetR family HCN55_02985 PF16859 Tetracyclin repressor-like, C-terminal domain HCN55_02995 PF01022 Bacterial regulatory protein, arsR family HCN55_03000 PF02040 Arsenical pump membrane protein HCN55_03010 PF12746 GNAT acetyltransferase HCN55_03015 PF00892 EamA-like transporter family HCN55_03020 PF00392 Bacterial regulatory proteins, gntR family HCN55_03020 PF00155 Aminotransferase class I and II HCN55_03025 PF01613 Flavin reductase like domain HCN55_03035 PF02627 Carboxymuconolactone decarboxylase family HCN55_03050 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HCN55_03050 PF07730 Histidine kinase HCN55_03055 PF00072 Response regulator receiver domain HCN55_03055 PF00196 Bacterial regulatory proteins, luxR family HCN55_03060 PF03176 MMPL family HCN55_03065 PF12697 Alpha/beta hydrolase family HCN55_03070 PF04474 Protein of unknown function (DUF554) HCN55_03075 PF06445 GyrI-like small molecule binding domain HCN55_03075 PF13411 MerR HTH family regulatory protein HCN55_03080 PF16916 Dimerisation domain of Zinc Transporter HCN55_03080 PF01545 Cation efflux family HCN55_03085 PF00881 Nitroreductase family HCN55_03090 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily HCN55_03095 PF07681 DoxX HCN55_03100 PF00085 Thioredoxin HCN55_03105 PF10676 Spore germination protein gerPA/gerPF HCN55_03115 PF10676 Spore germination protein gerPA/gerPF HCN55_03120 PF04239 Protein of unknown function (DUF421) HCN55_03125 PF04239 Protein of unknown function (DUF421) HCN55_03130 PF00011 Hsp20/alpha crystallin family HCN55_03135 PF10676 Spore germination protein gerPA/gerPF HCN55_03140 PF10676 Spore germination protein gerPA/gerPF HCN55_03145 PF00440 Bacterial regulatory proteins, tetR family HCN55_03150 PF13564 DoxX-like family HCN55_03155 PF00583 Acetyltransferase (GNAT) family HCN55_03165 PF00324 Amino acid permease HCN55_03170 PF05163 DinB family HCN55_03175 PF01047 MarR family HCN55_03180 PF03176 MMPL family HCN55_03185 PF00881 Nitroreductase family HCN55_03190 PF01047 MarR family HCN55_03195 PF07690 Major Facilitator Superfamily HCN55_03200 PF01925 Sulfite exporter TauE/SafE HCN55_03205 PF07729 FCD domain HCN55_03205 PF00392 Bacterial regulatory proteins, gntR family HCN55_03210 PF01476 LysM domain HCN55_03210 PF00704 Glycosyl hydrolases family 18 HCN55_03215 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase HCN55_03220 PF11611 Domain of unknown function (DUF4352) HCN55_03220 PF08139 Prokaryotic membrane lipoprotein lipid attachment site HCN55_03225 PF00245 Alkaline phosphatase HCN55_03230 PF08818 Domain of unknown function (DU1801) HCN55_03235 PF16302 Domain of unknown function (DUF4944) HCN55_03240 PF00583 Acetyltransferase (GNAT) family HCN55_03245 PF01966 HD domain HCN55_03250 PF07563 Protein of unknown function (DUF1541) HCN55_03255 PF07690 Major Facilitator Superfamily HCN55_03260 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit HCN55_03265 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit HCN55_03270 PF02378 Phosphotransferase system, EIIC HCN55_03275 PF00232 Glycosyl hydrolase family 1 HCN55_03280 PF00392 Bacterial regulatory proteins, gntR family HCN55_03280 PF07702 UTRA domain HCN55_03285 PF00480 ROK family HCN55_03290 PF01238 Phosphomannose isomerase type I HCN55_03295 PF02156 Glycosyl hydrolase family 26 HCN55_03340 PF02769 AIR synthase related protein, C-terminal domain HCN55_03340 PF00586 AIR synthase related protein, N-terminal domain HCN55_03345 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE HCN55_03350 PF00814 Glycoprotease family HCN55_03355 PF00583 Acetyltransferase (GNAT) family HCN55_03360 PF00814 Glycoprotease family HCN55_03365 PF00005 ABC transporter HCN55_03365 PF12848 ABC transporter HCN55_03365 PF16326 ABC transporter C-terminal domain HCN55_03370 PF01967 MoaC family HCN55_03375 PF02629 CoA binding domain HCN55_03375 PF06971 Putative DNA-binding protein N-terminus HCN55_03380 PF02416 mttA/Hcf106 family HCN55_03385 PF00902 Sec-independent protein translocase protein (TatC) HCN55_03390 PF14146 Domain of unknown function (DUF4305) HCN55_03395 PF02517 CPBP intramembrane metalloprotease HCN55_03400 PF00166 Chaperonin 10 Kd subunit HCN55_03405 PF00118 TCP-1/cpn60 chaperonin family HCN55_03430 PF00145 C-5 cytosine-specific DNA methylase HCN55_03435 PF00145 C-5 cytosine-specific DNA methylase HCN55_03450 PF07728 AAA domain (dynein-related subfamily) HCN55_03455 PF09563 LlaJI restriction endonuclease HCN55_03470 PF13176 Tetratricopeptide repeat HCN55_03470 PF00931 NB-ARC domain HCN55_03475 PF08240 Alcohol dehydrogenase GroES-like domain HCN55_03475 PF00107 Zinc-binding dehydrogenase HCN55_03485 PF00294 pfkB family carbohydrate kinase HCN55_03490 PF04012 PspA/IM30 family HCN55_03495 PF08271 TFIIB zinc-binding HCN55_03500 PF04536 TPM domain HCN55_03505 PF13421 SPFH domain-Band 7 family HCN55_03510 PF07885 Ion channel HCN55_03515 PF00083 Sugar (and other) transporter HCN55_03520 PF08240 Alcohol dehydrogenase GroES-like domain HCN55_03520 PF00107 Zinc-binding dehydrogenase HCN55_03525 PF03330 Lytic transglycolase HCN55_03530 PF07676 WD40-like Beta Propeller Repeat HCN55_03540 PF14169 Cold-inducible protein YdjO HCN55_03545 PF12697 Alpha/beta hydrolase family HCN55_03550 PF13170 Protein of unknown function (DUF4003) HCN55_03555 PF00394 Multicopper oxidase HCN55_03555 PF07731 Multicopper oxidase HCN55_03555 PF07732 Multicopper oxidase HCN55_03560 PF00324 Amino acid permease HCN55_03570 PF16916 Dimerisation domain of Zinc Transporter HCN55_03570 PF01545 Cation efflux family HCN55_03575 PF07726 ATPase family associated with various cellular activities (AAA) HCN55_03575 PF17863 AAA lid domain HCN55_03580 PF01882 Protein of unknown function DUF58 HCN55_03585 PF01841 Transglutaminase-like superfamily HCN55_03585 PF13559 Domain of unknown function (DUF4129) HCN55_03585 PF11992 Domain of unknown function (DUF3488) HCN55_03590 PF00117 Glutamine amidotransferase class-I HCN55_03590 PF02540 NAD synthase HCN55_03590 PF00958 GMP synthase C terminal domain HCN55_03595 PF00860 Permease family HCN55_03605 PF13076 Fur-regulated basic protein A HCN55_03610 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) HCN55_03615 PF14044 NETI protein HCN55_03620 PF00731 AIR carboxylase HCN55_03625 PF02222 ATP-grasp domain HCN55_03625 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain HCN55_03630 PF10397 Adenylosuccinate lyase C-terminus HCN55_03630 PF00206 Lyase HCN55_03635 PF01259 SAICAR synthetase HCN55_03640 PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase HCN55_03650 PF00586 AIR synthase related protein, N-terminal domain HCN55_03650 PF02769 AIR synthase related protein, C-terminal domain HCN55_03650 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain HCN55_03655 PF00156 Phosphoribosyl transferase domain HCN55_03660 PF02769 AIR synthase related protein, C-terminal domain HCN55_03660 PF00586 AIR synthase related protein, N-terminal domain HCN55_03665 PF00551 Formyl transferase HCN55_03670 PF02142 MGS-like domain HCN55_03670 PF01808 AICARFT/IMPCHase bienzyme HCN55_03675 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain HCN55_03675 PF02843 Phosphoribosylglycinamide synthetase, C domain HCN55_03675 PF02844 Phosphoribosylglycinamide synthetase, N domain HCN55_03680 PF01037 Lrp/AsnC ligand binding domain HCN55_03685 PF13520 Amino acid permease HCN55_03690 PF11127 Protein of unknown function (DUF2892) HCN55_03695 PF13382 Adenine deaminase C-terminal domain HCN55_03695 PF01979 Amidohydrolase family HCN55_03700 PF17479 Protein of unknown function (DUF3048) C-terminal domain HCN55_03700 PF11258 Protein of unknown function (DUF3048) N-terminal domain HCN55_03705 PF01371 Trp repressor protein HCN55_03710 PF01645 Conserved region in glutamate synthase HCN55_03715 PF01884 PcrB family HCN55_03720 PF00580 UvrD/REP helicase N-terminal domain HCN55_03720 PF13361 UvrD-like helicase C-terminal domain HCN55_03725 PF00533 BRCA1 C Terminus (BRCT) domain HCN55_03725 PF03119 NAD-dependent DNA ligase C4 zinc finger domain HCN55_03725 PF03120 NAD-dependent DNA ligase OB-fold domain HCN55_03725 PF12826 Helix-hairpin-helix motif HCN55_03725 PF01653 NAD-dependent DNA ligase adenylation domain HCN55_03730 PF07537 CamS sex pheromone cAM373 precursor HCN55_03735 PF01636 Phosphotransferase enzyme family HCN55_03740 PF02308 MgtC family HCN55_03745 PF00474 Sodium:solute symporter family HCN55_03750 PF02686 Glu-tRNAGln amidotransferase C subunit HCN55_03755 PF01425 Amidase HCN55_03760 PF02637 GatB domain HCN55_03760 PF02934 GatB/GatE catalytic domain HCN55_03765 PF00440 Bacterial regulatory proteins, tetR family HCN55_03770 PF00873 AcrB/AcrD/AcrF family HCN55_03775 PF00781 Diacylglycerol kinase catalytic domain HCN55_03780 PF01938 TRAM domain HCN55_03780 PF05958 tRNA (Uracil-5-)-methyltransferase HCN55_03785 PF13408 Recombinase zinc beta ribbon domain HCN55_03785 PF07508 Recombinase HCN55_03790 PF18010 Cry35Ab1 HTH C-terminal domain HCN55_03790 PF00239 Resolvase, N terminal domain HCN55_03805 PF10544 T5orf172 domain HCN55_03820 PF04634 Protein of unknown function, DUF600 HCN55_03825 PF04740 LXG domain of WXG superfamily HCN55_03835 PF18801 response regulator aspartate phosphatase H, N terminal HCN55_03835 PF13176 Tetratricopeptide repeat HCN55_03845 PF01709 Transcriptional regulator HCN55_03855 PF00440 Bacterial regulatory proteins, tetR family HCN55_03860 PF12680 SnoaL-like domain HCN55_03865 PF01370 NAD dependent epimerase/dehydratase family HCN55_03870 PF11007 Spore coat associated protein JA (CotJA) HCN55_03875 PF12652 CotJB protein HCN55_03880 PF05067 Manganese containing catalase HCN55_03885 PF00583 Acetyltransferase (GNAT) family HCN55_03890 PF14150 YesK-like protein HCN55_03895 PF04854 Protein of unknown function, DUF624 HCN55_03900 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HCN55_03900 PF00672 HAMP domain HCN55_03900 PF02743 Cache domain HCN55_03900 PF06580 Histidine kinase HCN55_03905 PF00072 Response regulator receiver domain HCN55_03905 PF12833 Helix-turn-helix domain HCN55_03910 PF13416 Bacterial extracellular solute-binding protein HCN55_03915 PF00528 Binding-protein-dependent transport system inner membrane component HCN55_03920 PF00528 Binding-protein-dependent transport system inner membrane component HCN55_03925 PF07470 Glycosyl Hydrolase Family 88 HCN55_03930 PF12833 Helix-turn-helix domain HCN55_03935 PF13472 GDSL-like Lipase/Acylhydrolase family HCN55_03940 PF09224 Domain of unknown function (DUF1961) HCN55_03945 PF04854 Protein of unknown function, DUF624 HCN55_03950 PF18370 Rhamnogalacturonan I lyases beta-sheet domain HCN55_03955 PF01839 FG-GAP repeat HCN55_03955 PF18370 Rhamnogalacturonan I lyases beta-sheet domain HCN55_03960 PF00657 GDSL-like Lipase/Acylhydrolase HCN55_03965 PF02449 Beta-galactosidase HCN55_03965 PF08533 Beta-galactosidase C-terminal domain HCN55_03965 PF08532 Beta-galactosidase trimerisation domain HCN55_03975 PF01547 Bacterial extracellular solute-binding protein HCN55_03980 PF00528 Binding-protein-dependent transport system inner membrane component HCN55_03985 PF00528 Binding-protein-dependent transport system inner membrane component HCN55_03990 PF02056 Family 4 glycosyl hydrolase HCN55_03990 PF11975 Family 4 glycosyl hydrolase C-terminal domain HCN55_03995 PF04239 Protein of unknown function (DUF421) HCN55_04000 PF03992 Antibiotic biosynthesis monooxygenase HCN55_04005 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily HCN55_04020 PF10055 Uncharacterized small protein (DUF2292) HCN55_04025 PF01027 Inhibitor of apoptosis-promoting Bax1 HCN55_04030 PF00892 EamA-like transporter family HCN55_04035 PF01047 MarR family HCN55_04040 PF01494 FAD binding domain HCN55_04045 PF13037 Domain of unknown function (DUF3898) HCN55_04045 PF13039 Protein of unknown function (DUF3900) HCN55_04050 PF00667 FAD binding domain HCN55_04050 PF00258 Flavodoxin HCN55_04050 PF00175 Oxidoreductase NAD-binding domain HCN55_04050 PF00067 Cytochrome P450 HCN55_04055 PF00884 Sulfatase HCN55_04060 PF00483 Nucleotidyl transferase HCN55_04065 PF16363 GDP-mannose 4,6 dehydratase HCN55_04070 PF03407 Nucleotide-diphospho-sugar transferase HCN55_04075 PF00535 Glycosyl transferase family 2 HCN55_04080 PF03407 Nucleotide-diphospho-sugar transferase HCN55_04085 PF07690 Major Facilitator Superfamily HCN55_04090 PF13419 Haloacid dehalogenase-like hydrolase HCN55_04095 PF13520 Amino acid permease HCN55_04100 PF00171 Aldehyde dehydrogenase family HCN55_04105 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HCN55_04110 PF00005 ABC transporter HCN55_04110 PF16326 ABC transporter C-terminal domain HCN55_04110 PF12848 ABC transporter HCN55_04115 PF10787 Uncharacterised protein from bacillus cereus group HCN55_04120 PF13411 MerR HTH family regulatory protein HCN55_04125 PF07690 Major Facilitator Superfamily HCN55_04135 PF12848 ABC transporter HCN55_04135 PF00005 ABC transporter HCN55_04140 PF00271 Helicase conserved C-terminal domain HCN55_04140 PF00270 DEAD/DEAH box helicase HCN55_04145 PF00583 Acetyltransferase (GNAT) family HCN55_04150 PF16884 N-terminal domain of oxidoreductase HCN55_04150 PF00107 Zinc-binding dehydrogenase HCN55_04155 PF07690 Major Facilitator Superfamily HCN55_04160 PF03781 Sulfatase-modifying factor enzyme 1 HCN55_04165 PF00005 ABC transporter HCN55_04170 PF01032 FecCD transport family HCN55_04175 PF01032 FecCD transport family HCN55_04180 PF01497 Periplasmic binding protein HCN55_04185 PF11486 Protein of unknown function (DUF3212) HCN55_04190 PF11181 Heat induced stress protein YflT HCN55_04195 PF00544 Pectate lyase HCN55_04200 PF00939 Sodium:sulfate symporter transmembrane region HCN55_04205 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain HCN55_04205 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HCN55_04210 PF00072 Response regulator receiver domain HCN55_04210 PF08279 HTH domain HCN55_04210 PF12431 Transcriptional regulator HCN55_04215 PF03401 Tripartite tricarboxylate transporter family receptor HCN55_04220 PF03600 Citrate transporter HCN55_04225 PF00753 Metallo-beta-lactamase superfamily HCN55_04230 PF02898 Nitric oxide synthase, oxygenase domain HCN55_04235 PF00708 Acylphosphatase HCN55_04240 PF03475 3-alpha domain HCN55_04240 PF03473 MOSC domain HCN55_04245 PF11121 Protein of unknown function (DUF2639) HCN55_04255 PF11588 Protein of unknown function (DUF3243) HCN55_04260 PF00557 Metallopeptidase family M24 HCN55_04265 PF00367 phosphotransferase system, EIIB HCN55_04265 PF02378 Phosphotransferase system, EIIC HCN55_04270 PF00884 Sulfatase HCN55_04280 PF09350 Domain of unknown function (DUF1992) HCN55_04290 PF03845 Spore germination protein HCN55_04300 PF05504 Spore germination B3/ GerAC like, C-terminal HCN55_04305 PF03323 Bacillus/Clostridium GerA spore germination protein HCN55_04310 PF02378 Phosphotransferase system, EIIC HCN55_04310 PF00367 phosphotransferase system, EIIB HCN55_04315 PF00128 Alpha amylase, catalytic domain HCN55_04315 PF16657 Maltogenic Amylase, C-terminal domain HCN55_04320 PF07702 UTRA domain HCN55_04320 PF00392 Bacterial regulatory proteins, gntR family HCN55_04325 PF00881 Nitroreductase family HCN55_04330 PF00149 Calcineurin-like phosphoesterase HCN55_04330 PF02872 5'-nucleotidase, C-terminal domain HCN55_04335 PF01965 DJ-1/PfpI family HCN55_04340 PF07690 Major Facilitator Superfamily HCN55_04345 PF06569 Protein of unknown function (DUF1128) HCN55_04350 PF01451 Low molecular weight phosphotyrosine protein phosphatase HCN55_04360 PF03631 Virulence factor BrkB HCN55_04365 PF07690 Major Facilitator Superfamily HCN55_04370 PF01699 Sodium/calcium exchanger protein HCN55_04375 PF14167 YfkD-like protein HCN55_04380 PF00924 Mechanosensitive ion channel HCN55_04385 PF08756 YfkB-like domain HCN55_04385 PF04055 Radical SAM superfamily HCN55_04395 PF01522 Polysaccharide deacetylase HCN55_04400 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase HCN55_04400 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase HCN55_04405 PF01544 CorA-like Mg2+ transporter protein HCN55_04410 PF00730 HhH-GPD superfamily base excision DNA repair protein HCN55_04415 PF01938 TRAM domain HCN55_04415 PF05958 tRNA (Uracil-5-)-methyltransferase HCN55_04420 PF14118 YfzA-like protein HCN55_04425 PF01207 Dihydrouridine synthase (Dus) HCN55_04440 PF00676 Dehydrogenase E1 component HCN55_04445 PF02779 Transketolase, pyrimidine binding domain HCN55_04445 PF02780 Transketolase, C-terminal domain HCN55_04450 PF02817 e3 binding domain HCN55_04450 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) HCN55_04450 PF00364 Biotin-requiring enzyme HCN55_04455 PF07992 Pyridine nucleotide-disulphide oxidoreductase HCN55_04455 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain HCN55_04460 PF00158 Sigma-54 interaction domain HCN55_04460 PF02954 Bacterial regulatory protein, Fis family HCN55_04460 PF01590 GAF domain HCN55_04465 PF08141 Small acid-soluble spore protein H family HCN55_04470 PF02694 Uncharacterised BCR, YnfA/UPF0060 family HCN55_04475 PF17353 Family of unknown function (DUF5381) HCN55_04480 PF17353 Family of unknown function (DUF5381) HCN55_04495 PF06013 Proteins of 100 residues with WXG HCN55_04500 PF11975 Family 4 glycosyl hydrolase C-terminal domain HCN55_04500 PF02056 Family 4 glycosyl hydrolase HCN55_04505 PF01380 SIS domain HCN55_04505 PF01418 Helix-turn-helix domain, rpiR family HCN55_04510 PF02378 Phosphotransferase system, EIIC HCN55_04510 PF00367 phosphotransferase system, EIIB HCN55_04515 PF00664 ABC transporter transmembrane region HCN55_04515 PF00005 ABC transporter HCN55_04520 PF00664 ABC transporter transmembrane region HCN55_04520 PF00005 ABC transporter HCN55_04525 PF07681 DoxX HCN55_04530 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily HCN55_04535 PF12833 Helix-turn-helix domain HCN55_04535 PF02311 AraC-like ligand binding domain HCN55_04540 PF00083 Sugar (and other) transporter HCN55_04545 PF01261 Xylose isomerase-like TIM barrel HCN55_04550 PF02894 Oxidoreductase family, C-terminal alpha/beta domain HCN55_04550 PF01408 Oxidoreductase family, NAD-binding Rossmann fold HCN55_04555 PF07730 Histidine kinase HCN55_04560 PF00196 Bacterial regulatory proteins, luxR family HCN55_04560 PF00072 Response regulator receiver domain HCN55_04565 PF00005 ABC transporter HCN55_04580 PF10400 Virulence activator alpha C-term HCN55_04580 PF03551 Transcriptional regulator PadR-like family HCN55_04585 PF01674 Lipase (class 2) HCN55_04590 PF01757 Acyltransferase family HCN55_04595 PF00440 Bacterial regulatory proteins, tetR family HCN55_04595 PF17922 Tetracyclin repressor-like, C-terminal domain HCN55_04600 PF07690 Major Facilitator Superfamily HCN55_04605 PF12867 DinB superfamily HCN55_04610 PF07690 Major Facilitator Superfamily HCN55_04615 PF01047 MarR family HCN55_04620 PF03706 Lysylphosphatidylglycerol synthase TM region HCN55_04620 PF09924 Uncharacterised conserved protein (DUF2156) HCN55_04625 PF01497 Periplasmic binding protein HCN55_04630 PF01032 FecCD transport family HCN55_04635 PF01032 FecCD transport family HCN55_04640 PF02567 Phenazine biosynthesis-like protein HCN55_04645 PF00881 Nitroreductase family HCN55_04650 PF14151 YfhD-like protein HCN55_04655 PF14152 YfhE-like protein HCN55_04660 PF08338 Domain of unknown function (DUF1731) HCN55_04660 PF01370 NAD dependent epimerase/dehydratase family HCN55_04665 PF02631 RecX family HCN55_04670 PF08838 Protein of unknown function (DUF1811) HCN55_04675 PF07690 Major Facilitator Superfamily HCN55_04680 PF08176 Small acid-soluble spore protein K family HCN55_04685 PF14043 WVELL protein HCN55_04690 PF08239 Bacterial SH3 domain HCN55_04695 PF13630 SdpI/YhfL protein family HCN55_04700 PF00561 alpha/beta hydrolase fold HCN55_04705 PF00535 Glycosyl transferase family 2 HCN55_04710 PF09586 Bacterial membrane protein YfhO HCN55_04715 PF04307 LexA-binding, inner membrane-associated putative hydrolase HCN55_04720 PF00730 HhH-GPD superfamily base excision DNA repair protein HCN55_04720 PF14815 NUDIX domain HCN55_04735 PF04259 Small, acid-soluble spore protein, gamma-type HCN55_04740 PF14182 YgaB-like protein HCN55_04745 PF04167 Protein of unknown function (DUF402) HCN55_04750 PF00005 ABC transporter HCN55_04750 PF00664 ABC transporter transmembrane region HCN55_04755 PF06081 Aromatic acid exporter family member 1 HCN55_04760 PF00202 Aminotransferase class-III HCN55_04765 PF00578 AhpC/TSA family HCN55_04770 PF01475 Ferric uptake regulator family HCN55_04775 PF11023 Zinc-ribbon containing domain HCN55_04780 PF14540 Nucleotidyltransferase-like HCN55_04780 PF18576 Helix-turn-helix domain HCN55_04880 PF07070 SpoOM protein HCN55_04890 PF07875 Coat F domain HCN55_04895 PF03575 Peptidase family S51 HCN55_04900 PF01964 Radical SAM ThiC family HCN55_04900 PF13667 ThiC-associated domain HCN55_04905 PF01565 FAD binding domain HCN55_04905 PF08031 Berberine and berberine like HCN55_04910 PF13040 Fur-regulated basic protein B HCN55_04915 PF00199 Catalase HCN55_04915 PF06628 Catalase-related immune-responsive HCN55_04920 PF00005 ABC transporter HCN55_04925 PF09084 NMT1/THI5 like HCN55_04930 PF00528 Binding-protein-dependent transport system inner membrane component HCN55_04935 PF00296 Luciferase-like monooxygenase HCN55_04945 PF00253 Ribosomal protein S14p/S29e HCN55_04955 PF01381 Helix-turn-helix HCN55_04970 PF08331 Domain of unknown function (DUF1730) HCN55_04975 PF12671 Putative amidase domain HCN55_04980 PF00588 SpoU rRNA Methylase family HCN55_04985 PF13171 Protein of unknown function (DUF4004) HCN55_04990 PF04519 Polymer-forming cytoskeletal HCN55_05000 PF08298 PrkA AAA domain HCN55_05000 PF06798 PrkA serine protein kinase C-terminal domain HCN55_05005 PF04285 Protein of unknown function (DUF444) HCN55_05010 PF01047 MarR family HCN55_05020 PF07690 Major Facilitator Superfamily HCN55_05025 PF03358 NADPH-dependent FMN reductase HCN55_05045 PF00392 Bacterial regulatory proteins, gntR family HCN55_05050 PF00005 ABC transporter HCN55_05055 PF00005 ABC transporter HCN55_05060 PF12679 ABC-2 family transporter protein HCN55_05065 PF00313 'Cold-shock' DNA-binding domain HCN55_05070 PF03180 NLPA lipoprotein HCN55_05075 PF00990 Diguanylate cyclase, GGDEF domain HCN55_05075 PF07694 5TMR of 5TMR-LYT HCN55_05080 PF00375 Sodium:dicarboxylate symporter family HCN55_05090 PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) HCN55_05100 PF07875 Coat F domain HCN55_05105 PF02872 5'-nucleotidase, C-terminal domain HCN55_05105 PF00746 LPXTG cell wall anchor motif HCN55_05105 PF00149 Calcineurin-like phosphoesterase HCN55_05105 PF00565 Staphylococcal nuclease homologue HCN55_05110 PF04203 Sortase domain HCN55_05115 PF00849 RNA pseudouridylate synthase HCN55_05115 PF01479 S4 domain HCN55_05120 PF17326 Family of unknown function (DUF5365) HCN55_05125 PF00571 CBS domain HCN55_05130 PF13419 Haloacid dehalogenase-like hydrolase HCN55_05135 PF00795 Carbon-nitrogen hydrolase HCN55_05135 PF00583 Acetyltransferase (GNAT) family HCN55_05140 PF00202 Aminotransferase class-III HCN55_05145 PF04309 Glycerol-3-phosphate responsive antiterminator HCN55_05150 PF00230 Major intrinsic protein HCN55_05155 PF02782 FGGY family of carbohydrate kinases, C-terminal domain HCN55_05155 PF00370 FGGY family of carbohydrate kinases, N-terminal domain HCN55_05160 PF01266 FAD dependent oxidoreductase HCN55_05160 PF16901 C-terminal domain of alpha-glycerophosphate oxidase HCN55_05165 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III HCN55_05165 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I HCN55_05165 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain HCN55_05165 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II HCN55_05170 PF07730 Histidine kinase HCN55_05170 PF13185 GAF domain HCN55_05175 PF00072 Response regulator receiver domain HCN55_05175 PF00196 Bacterial regulatory proteins, luxR family HCN55_05180 PF03358 NADPH-dependent FMN reductase HCN55_05185 PF14148 YhdB-like protein HCN55_05190 PF13028 Protein of unknown function (DUF3889) HCN55_05195 PF01476 LysM domain HCN55_05195 PF00877 NlpC/P60 family HCN55_05200 PF02082 Transcriptional regulator HCN55_05205 PF05552 Conserved TM helix HCN55_05210 PF04293 SpoVR like protein HCN55_05215 PF00245 Alkaline phosphatase HCN55_05220 PF00877 NlpC/P60 family HCN55_05220 PF01476 LysM domain HCN55_05225 PF03466 LysR substrate binding domain HCN55_05225 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HCN55_05230 PF00285 Citrate synthase, C-terminal domain HCN55_05240 PF13520 Amino acid permease HCN55_05245 PF00209 Sodium:neurotransmitter symporter family HCN55_05250 PF00155 Aminotransferase class I and II HCN55_05250 PF00392 Bacterial regulatory proteins, gntR family HCN55_05255 PF00583 Acetyltransferase (GNAT) family HCN55_05260 PF17453 Sigma-M inhibitor HCN55_05265 PF13800 Sigma factor regulator N-terminal HCN55_05265 PF13791 Sigma factor regulator C-terminal HCN55_05270 PF04542 Sigma-70 region 2 HCN55_05270 PF08281 Sigma-70, region 4 HCN55_05275 PF00248 Aldo/keto reductase family HCN55_05280 PF01553 Acyltransferase HCN55_05285 PF01595 Cyclin M transmembrane N-terminal domain HCN55_05285 PF00571 CBS domain HCN55_05285 PF03471 Transporter associated domain HCN55_05290 PF13411 MerR HTH family regulatory protein HCN55_05295 PF00155 Aminotransferase class I and II HCN55_05300 PF00571 CBS domain HCN55_05300 PF03471 Transporter associated domain HCN55_05300 PF01595 Cyclin M transmembrane N-terminal domain HCN55_05305 PF02537 CrcB-like protein, Camphor Resistance (CrcB) HCN55_05310 PF02537 CrcB-like protein, Camphor Resistance (CrcB) HCN55_05315 PF03009 Glycerophosphoryl diester phosphodiesterase family HCN55_05320 PF17444 Uncharacterized YhdX-like HCN55_05325 PF00924 Mechanosensitive ion channel HCN55_05330 PF02146 Sir2 family HCN55_05335 PF01522 Polysaccharide deacetylase HCN55_05340 PF01063 Amino-transferase class IV HCN55_05345 PF03553 Na+/H+ antiporter family HCN55_05350 PF00582 Universal stress protein family HCN55_05360 PF00664 ABC transporter transmembrane region HCN55_05360 PF00005 ABC transporter HCN55_05365 PF00664 ABC transporter transmembrane region HCN55_05365 PF00005 ABC transporter HCN55_05370 PF13460 NAD(P)H-binding HCN55_05380 PF00269 Small, acid-soluble spore proteins, alpha/beta type HCN55_05385 PF17277 Family of unknown function (DUF5342) HCN55_05390 PF14398 YheC/D like ATP-grasp HCN55_05395 PF14398 YheC/D like ATP-grasp HCN55_05400 PF04286 Protein of unknown function (DUF445) HCN55_05405 PF06133 Control of competence regulator ComK, YlbF/YmcA HCN55_05410 PF08713 DNA alkylation repair enzyme HCN55_05420 PF04055 Radical SAM superfamily HCN55_05425 PF00999 Sodium/hydrogen exchanger family HCN55_05430 PF02080 TrkA-C domain HCN55_05440 PF00378 Enoyl-CoA hydratase/isomerase HCN55_05445 PF14120 YhzD-like protein HCN55_05450 PF00005 ABC transporter HCN55_05450 PF13732 Domain of unknown function (DUF4162) HCN55_05460 PF00149 Calcineurin-like phosphoesterase HCN55_05465 PF13514 AAA domain HCN55_05470 PF01966 HD domain HCN55_05475 PF14147 Sporulation protein YhaL HCN55_05485 PF09680 Family of unknown function HCN55_05490 PF09680 Family of unknown function HCN55_05500 PF11667 Putative zincin peptidase HCN55_05505 PF08963 Protein of unknown function (DUF1878) HCN55_05510 PF01047 MarR family HCN55_05515 PF12732 YtxH-like protein HCN55_05525 PF17099 Tryptophan transporter TrpP HCN55_05530 PF00266 Aminotransferase class-V HCN55_05535 PF01230 HIT domain HCN55_05540 PF00005 ABC transporter HCN55_05545 PF05975 Bacterial ABC transporter protein EcsB HCN55_05550 PF12787 EcsC protein family HCN55_05555 PF07687 Peptidase dimerisation domain HCN55_05555 PF01546 Peptidase family M20/M25/M40 HCN55_05570 PF03992 Antibiotic biosynthesis monooxygenase HCN55_05575 PF00905 Penicillin binding protein transpeptidase domain HCN55_05575 PF00912 Transglycosylase HCN55_05580 PF01208 Uroporphyrinogen decarboxylase (URO-D) HCN55_05595 PF17932 Tetracyclin repressor-like, C-terminal domain HCN55_05595 PF00440 Bacterial regulatory proteins, tetR family HCN55_05605 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III HCN55_05605 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal HCN55_05610 PF10086 YhfC intramembrane metalloprotease HCN55_05620 PF05343 M42 glutamyl aminopeptidase HCN55_05625 PF04266 ASCH domain HCN55_05630 PF00375 Sodium:dicarboxylate symporter family HCN55_05635 PF14149 YhfH-like protein HCN55_05640 PF12706 Beta-lactamase superfamily domain HCN55_05645 PF03099 Biotin/lipoate A/B protein ligase family HCN55_05645 PF10437 Bacterial lipoate protein ligase C-terminus HCN55_05650 PF13460 NAD(P)H-binding HCN55_05655 PF13193 AMP-binding enzyme C-terminal domain HCN55_05655 PF00501 AMP-binding enzyme HCN55_05665 PF01435 Peptidase family M48 HCN55_05665 PF16491 CAAX prenyl protease N-terminal, five membrane helices HCN55_05670 PF05922 Peptidase inhibitor I9 HCN55_05670 PF00082 Subtilase family HCN55_05675 PF00583 Acetyltransferase (GNAT) family HCN55_05680 PF08240 Alcohol dehydrogenase GroES-like domain HCN55_05680 PF00107 Zinc-binding dehydrogenase HCN55_05685 PF01497 Periplasmic binding protein HCN55_05690 PF00300 Histidine phosphatase superfamily (branch 1) HCN55_05695 PF02803 Thiolase, C-terminal domain HCN55_05695 PF00108 Thiolase, N-terminal domain HCN55_05700 PF00501 AMP-binding enzyme HCN55_05700 PF13193 AMP-binding enzyme C-terminal domain HCN55_05705 PF02632 BioY family HCN55_05710 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HCN55_05715 PF00355 Rieske [2Fe-2S] domain HCN55_05715 PF01266 FAD dependent oxidoreductase HCN55_05725 PF08858 IDEAL domain HCN55_05730 PF06338 ComK protein HCN55_05740 PF05901 Excalibur calcium-binding domain HCN55_05745 PF00474 Sodium:solute symporter family HCN55_05750 PF11755 Protein of unknown function (DUF3311) HCN55_05760 PF09335 SNARE associated Golgi protein HCN55_05765 PF10502 Signal peptidase, peptidase S26 HCN55_05770 PF01494 FAD binding domain HCN55_05775 PF01047 MarR family HCN55_05780 PF07690 Major Facilitator Superfamily HCN55_05785 PF02894 Oxidoreductase family, C-terminal alpha/beta domain HCN55_05785 PF01408 Oxidoreductase family, NAD-binding Rossmann fold HCN55_05790 PF05116 Sucrose-6F-phosphate phosphohydrolase HCN55_05795 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family HCN55_05800 PF00356 Bacterial regulatory proteins, lacI family HCN55_05805 PF05145 Transition state regulatory protein AbrB HCN55_05810 PF07690 Major Facilitator Superfamily HCN55_05815 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle HCN55_05815 PF12793 Sugar transport-related sRNA regulator N-term HCN55_05820 PF03860 Domain of Unknown Function (DUF326) HCN55_05825 PF02915 Rubrerythrin HCN55_05830 PF13361 UvrD-like helicase C-terminal domain HCN55_05830 PF12705 PD-(D/E)XK nuclease superfamily HCN55_05835 PF00580 UvrD/REP helicase N-terminal domain HCN55_05835 PF13361 UvrD-like helicase C-terminal domain HCN55_05835 PF12705 PD-(D/E)XK nuclease superfamily HCN55_05840 PF00149 Calcineurin-like phosphoesterase HCN55_05840 PF12320 Type 5 capsule protein repressor C-terminal domain HCN55_05845 PF13476 AAA domain HCN55_05855 PF10676 Spore germination protein gerPA/gerPF HCN55_05860 PF10970 Spore germination protein GerPE HCN55_05870 PF10737 Spore germination protein GerPC HCN55_05875 PF10803 Spore germination GerPB HCN55_05880 PF10676 Spore germination protein gerPA/gerPF HCN55_05885 PF09388 Spo0E like sporulation regulatory protein HCN55_05890 PF08757 CotH kinase protein HCN55_05895 PF01557 Fumarylacetoacetate (FAA) hydrolase family HCN55_05900 PF07457 Protein of unknown function (DUF1516) HCN55_05905 PF00082 Subtilase family HCN55_05905 PF17936 Bacterial Ig domain HCN55_05910 PF10949 Protein of unknown function (DUF2777) HCN55_05915 PF00733 Asparagine synthase HCN55_05915 PF13537 Glutamine amidotransferase domain HCN55_05920 PF05163 DinB family HCN55_05930 PF01554 MatE HCN55_05935 PF12833 Helix-turn-helix domain HCN55_05935 PF02311 AraC-like ligand binding domain HCN55_05940 PF00356 Bacterial regulatory proteins, lacI family HCN55_05945 PF01408 Oxidoreductase family, NAD-binding Rossmann fold HCN55_05945 PF02894 Oxidoreductase family, C-terminal alpha/beta domain HCN55_05950 PF05163 DinB family HCN55_05955 PF01810 LysE type translocator HCN55_05960 PF00155 Aminotransferase class I and II HCN55_05960 PF00392 Bacterial regulatory proteins, gntR family HCN55_05965 PF13599 Pentapeptide repeats (9 copies) HCN55_05970 PF00561 alpha/beta hydrolase fold HCN55_05970 PF08386 TAP-like protein HCN55_05980 PF01747 ATP-sulfurylase HCN55_05980 PF14306 PUA-like domain HCN55_05985 PF01507 Phosphoadenosine phosphosulfate reductase family HCN55_05990 PF04029 2-phosphosulpholactate phosphatase HCN55_05995 PF02679 (2R)-phospho-3-sulfolactate synthase (ComA) HCN55_06000 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 HCN55_06005 PF13378 Enolase C-terminal domain-like HCN55_06005 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain HCN55_06010 PF07690 Major Facilitator Superfamily HCN55_06015 PF18014 Acetyltransferase (GNAT) domain HCN55_06015 PF13673 Acetyltransferase (GNAT) domain HCN55_06020 PF13673 Acetyltransferase (GNAT) domain HCN55_06025 PF02574 Homocysteine S-methyltransferase HCN55_06025 PF02219 Methylenetetrahydrofolate reductase HCN55_06030 PF04461 Protein of unknown function (DUF520) HCN55_06035 PF17783 CvfB-like winged helix domain HCN55_06035 PF13509 S1 domain HCN55_06050 PF17418 Sporulation delaying protein SdpA HCN55_06055 PF03551 Transcriptional regulator PadR-like family HCN55_06065 PF12650 Domain of unknown function (DUF3784) HCN55_06070 PF01447 Thermolysin metallopeptidase, catalytic domain HCN55_06070 PF07504 Fungalysin/Thermolysin Propeptide Motif HCN55_06070 PF03413 Peptidase propeptide and YPEB domain HCN55_06070 PF02868 Thermolysin metallopeptidase, alpha-helical domain HCN55_06075 PF02645 Uncharacterised protein, DegV family COG1307 HCN55_06080 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) HCN55_06080 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 HCN55_06085 PF12690 Intracellular proteinase inhibitor HCN55_06090 PF12758 Protein of unknown function (DUF3813) HCN55_06105 PF00326 Prolyl oligopeptidase family HCN55_06110 PF01883 Iron-sulfur cluster assembly protein HCN55_06120 PF01565 FAD binding domain HCN55_06125 PF07690 Major Facilitator Superfamily HCN55_06130 PF02774 Semialdehyde dehydrogenase, dimerisation domain HCN55_06130 PF01118 Semialdehyde dehydrogenase, NAD binding domain HCN55_06135 PF01960 ArgJ family HCN55_06140 PF00696 Amino acid kinase family HCN55_06145 PF00202 Aminotransferase class-III HCN55_06150 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain HCN55_06150 PF00117 Glutamine amidotransferase class-I HCN55_06155 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain HCN55_06155 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain HCN55_06160 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain HCN55_06160 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain HCN55_06165 PF14168 YjzC-like protein HCN55_06170 PF11151 Protein of unknown function (DUF2929) HCN55_06185 PF02608 ABC transporter substrate-binding protein PnrA-like HCN55_06190 PF10815 ComZ HCN55_06200 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal HCN55_06200 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III HCN55_06205 PF00109 Beta-ketoacyl synthase, N-terminal domain HCN55_06205 PF02801 Beta-ketoacyl synthase, C-terminal domain HCN55_06210 PF10026 Predicted Zn-dependent protease (DUF2268) HCN55_06215 PF08352 Oligopeptide/dipeptide transporter, C-terminal region HCN55_06215 PF00005 ABC transporter HCN55_06220 PF08352 Oligopeptide/dipeptide transporter, C-terminal region HCN55_06220 PF00005 ABC transporter HCN55_06230 PF00528 Binding-protein-dependent transport system inner membrane component HCN55_06235 PF12911 N-terminal TM domain of oligopeptide transport permease C HCN55_06235 PF00528 Binding-protein-dependent transport system inner membrane component HCN55_06240 PF12227 Protein of unknown function (DUF3603) HCN55_06245 PF00579 tRNA synthetases class I (W and Y) HCN55_06250 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle HCN55_06255 PF00528 Binding-protein-dependent transport system inner membrane component HCN55_06260 PF12911 N-terminal TM domain of oligopeptide transport permease C HCN55_06260 PF00528 Binding-protein-dependent transport system inner membrane component HCN55_06265 PF08352 Oligopeptide/dipeptide transporter, C-terminal region HCN55_06265 PF00005 ABC transporter HCN55_06270 PF00005 ABC transporter HCN55_06270 PF08352 Oligopeptide/dipeptide transporter, C-terminal region HCN55_06275 PF07690 Major Facilitator Superfamily HCN55_06280 PF13508 Acetyltransferase (GNAT) domain HCN55_06285 PF03960 ArsC family HCN55_06290 PF03741 Integral membrane protein TerC family HCN55_06300 PF05389 Negative regulator of genetic competence (MecA) HCN55_06310 PF06054 Competence protein CoiA-like family HCN55_06315 PF08439 Oligopeptidase F HCN55_06315 PF01432 Peptidase family M3 HCN55_06330 PF01152 Bacterial-like globin HCN55_06335 PF01464 Transglycosylase SLT domain HCN55_06340 PF01928 CYTH domain HCN55_06350 PF04607 Region found in RelA / SpoT proteins HCN55_06355 PF01513 ATP-NAD kinase HCN55_06360 PF00849 RNA pseudouridylate synthase HCN55_06365 PF00149 Calcineurin-like phosphoesterase HCN55_06370 PF02254 TrkA-N domain HCN55_06370 PF00999 Sodium/hydrogen exchanger family HCN55_06370 PF02080 TrkA-C domain HCN55_06375 PF03070 TENA/THI-4/PQQC family HCN55_06380 PF02581 Thiamine monophosphate synthase HCN55_06385 PF01266 FAD dependent oxidoreductase HCN55_06390 PF02597 ThiS family HCN55_06395 PF05690 Thiazole biosynthesis protein ThiG HCN55_06400 PF00899 ThiF family HCN55_06405 PF08543 Phosphomethylpyrimidine kinase HCN55_06415 PF14153 Spore coat protein CotO HCN55_06420 PF10612 Spore coat protein Z HCN55_06425 PF10612 Spore coat protein Z HCN55_06430 PF07552 Spore Coat Protein X and V domain HCN55_06440 PF07552 Spore Coat Protein X and V domain HCN55_06445 PF07098 Protein of unknown function (DUF1360) HCN55_06460 PF14069 Stage VI sporulation protein F HCN55_06465 PF13361 UvrD-like helicase C-terminal domain HCN55_06465 PF00580 UvrD/REP helicase N-terminal domain HCN55_06475 PF13673 Acetyltransferase (GNAT) domain HCN55_06485 PF00756 Putative esterase HCN55_06490 PF01053 Cys/Met metabolism PLP-dependent enzyme HCN55_06495 PF01053 Cys/Met metabolism PLP-dependent enzyme HCN55_06500 PF13302 Acetyltransferase (GNAT) domain HCN55_06505 PF05684 Protein of unknown function (DUF819) HCN55_06515 PF12671 Putative amidase domain HCN55_06545 PF09639 YjcQ protein HCN55_06550 PF10668 Phage terminase small subunit HCN55_06555 PF03992 Antibiotic biosynthesis monooxygenase HCN55_06565 PF02368 Bacterial Ig-like domain (group 2) HCN55_06570 PF08279 HTH domain HCN55_06570 PF05043 Mga helix-turn-helix domain HCN55_06570 PF00874 PRD domain HCN55_06570 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 HCN55_06575 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit HCN55_06575 PF02378 Phosphotransferase system, EIIC HCN55_06575 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 HCN55_06580 PF01238 Phosphomannose isomerase type I HCN55_06585 PF11208 Protein of unknown function (DUF2992) HCN55_06590 PF13302 Acetyltransferase (GNAT) domain HCN55_06600 PF04073 Aminoacyl-tRNA editing domain HCN55_06605 PF13783 Domain of unknown function (DUF4177) HCN55_06610 PF14154 Domain of unknown function (DUF4306) HCN55_06615 PF01040 UbiA prenyltransferase family HCN55_06625 PF11738 Protein of unknown function (DUF3298) HCN55_06625 PF13739 Deacetylase PdaC HCN55_06625 PF01522 Polysaccharide deacetylase HCN55_06630 PF10901 Protein of unknown function (DUF2690) HCN55_06635 PF14070 Putative motility protein HCN55_06640 PF10026 Predicted Zn-dependent protease (DUF2268) HCN55_06645 PF10990 Protein of unknown function (DUF2809) HCN55_06650 PF14172 Domain of unknown function (DUF4309) HCN55_06655 PF01568 Molydopterin dinucleotide binding domain HCN55_06655 PF12838 4Fe-4S dicluster domain HCN55_06655 PF04879 Molybdopterin oxidoreductase Fe4S4 domain HCN55_06655 PF00384 Molybdopterin oxidoreductase HCN55_06655 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region HCN55_06660 PF07849 Protein of unknown function (DUF1641) HCN55_06665 PF11611 Domain of unknown function (DUF4352) HCN55_06670 PF00293 NUDIX domain HCN55_06680 PF00067 Cytochrome P450 HCN55_06685 PF04101 Glycosyltransferase family 28 C-terminal domain HCN55_06695 PF02602 Uroporphyrinogen-III synthase HemD HCN55_06700 PF03649 Uncharacterised protein family (UPF0014) HCN55_06705 PF00005 ABC transporter HCN55_06710 PF13536 Putative multidrug resistance efflux transporter HCN55_06720 PF07849 Protein of unknown function (DUF1641) HCN55_06725 PF07992 Pyridine nucleotide-disulphide oxidoreductase HCN55_06730 PF02614 Glucuronate isomerase HCN55_06740 PF02615 Malate/L-lactate dehydrogenase HCN55_06745 PF00107 Zinc-binding dehydrogenase HCN55_06745 PF08240 Alcohol dehydrogenase GroES-like domain HCN55_06750 PF03786 D-mannonate dehydratase (UxuA) HCN55_06755 PF00106 short chain dehydrogenase HCN55_06760 PF07690 Major Facilitator Superfamily HCN55_06765 PF00356 Bacterial regulatory proteins, lacI family HCN55_06770 PF01232 Mannitol dehydrogenase Rossmann domain HCN55_06770 PF08125 Mannitol dehydrogenase C-terminal domain HCN55_06775 PF08666 SAF domain HCN55_06775 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus HCN55_06780 PF01925 Sulfite exporter TauE/SafE HCN55_06785 PF05163 DinB family HCN55_06790 PF00004 ATPase family associated with various cellular activities (AAA) HCN55_06795 PF18801 response regulator aspartate phosphatase H, N terminal HCN55_06805 PF03795 YCII-related domain HCN55_06810 PF01471 Putative peptidoglycan binding domain HCN55_06810 PF01476 LysM domain HCN55_06810 PF01510 N-acetylmuramoyl-L-alanine amidase HCN55_06815 PF08000 Bacterial PH domain HCN55_06820 PF05908 Poly-gamma-glutamate hydrolase HCN55_06825 PF05067 Manganese containing catalase HCN55_06830 PF06114 IrrE N-terminal-like domain HCN55_06835 PF01381 Helix-turn-helix HCN55_06850 PF01695 IstB-like ATP binding protein HCN55_06865 PF17356 Phage-like element PBSX protein XtrA HCN55_06870 PF08281 Sigma-70, region 4 HCN55_06875 PF03592 Terminase small subunit HCN55_06875 PF10668 Phage terminase small subunit HCN55_06880 PF04466 Phage terminase large subunit HCN55_06880 PF17288 Terminase RNAseH like domain HCN55_06885 PF04860 Phage portal protein HCN55_06890 PF14550 Putative phage serine protease XkdF HCN55_06895 PF05065 Phage capsid family HCN55_06900 PF11436 Protein of unknown function (DUF3199) HCN55_06905 PF12206 Domain of unknown function (DUF3599) HCN55_06910 PF04883 Bacteriophage HK97-gp10, putative tail-component HCN55_06925 PF04984 Phage tail sheath protein subtilisin-like domain HCN55_06925 PF17482 Phage tail sheath C-terminal domain HCN55_06925 PF17481 Phage tail sheath protein beta-sandwich domain HCN55_06930 PF09393 Phage tail tube protein HCN55_06935 PF08890 Phage XkdN-like tail assembly chaperone protein, TAC HCN55_06945 PF01464 Transglycosylase SLT domain HCN55_06950 PF01476 LysM domain HCN55_06960 PF10844 Protein of unknown function (DUF2577) HCN55_06965 PF10934 Protein of unknown function (DUF2634) HCN55_06970 PF04865 Baseplate J-like protein HCN55_06975 PF10076 Uncharacterised protein conserved in bacteria (DUF2313) HCN55_06990 PF09636 XkdW protein HCN55_06995 PF09693 Phage uncharacterised protein (Phage_XkdX) HCN55_07005 PF10779 Haemolysin XhlA HCN55_07010 PF04688 SPP1 phage holin HCN55_07015 PF01471 Putative peptidoglycan binding domain HCN55_07015 PF01476 LysM domain HCN55_07015 PF01510 N-acetylmuramoyl-L-alanine amidase HCN55_07025 PF14185 Antitoxin SpoIISB, type II toxin-antitoxin system HCN55_07030 PF14171 Toxin SpoIISA, type II toxin-antitoxin system HCN55_07035 PF01384 Phosphate transporter family HCN55_07040 PF01865 Protein of unknown function DUF47 HCN55_07045 PF13520 Amino acid permease HCN55_07050 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily HCN55_07060 PF13231 Dolichyl-phosphate-mannose-protein mannosyltransferase HCN55_07065 PF00535 Glycosyl transferase family 2 HCN55_07075 PF13180 PDZ domain HCN55_07080 PF14748 Pyrroline-5-carboxylate reductase dimerisation HCN55_07080 PF03807 NADP oxidoreductase coenzyme F420-dependent HCN55_07085 PF04951 D-aminopeptidase HCN55_07090 PF00528 Binding-protein-dependent transport system inner membrane component HCN55_07095 PF00528 Binding-protein-dependent transport system inner membrane component HCN55_07095 PF12911 N-terminal TM domain of oligopeptide transport permease C HCN55_07100 PF00005 ABC transporter HCN55_07100 PF08352 Oligopeptide/dipeptide transporter, C-terminal region HCN55_07105 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle HCN55_07110 PF02016 LD-carboxypeptidase N-terminal domain HCN55_07110 PF17676 LD-carboxypeptidase C-terminal domain HCN55_07115 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain HCN55_07115 PF13378 Enolase C-terminal domain-like HCN55_07120 PF00877 NlpC/P60 family HCN55_07125 PF08352 Oligopeptide/dipeptide transporter, C-terminal region HCN55_07125 PF00005 ABC transporter HCN55_07130 PF10282 Lactonase, 7-bladed beta-propeller HCN55_07140 PF03061 Thioesterase superfamily HCN55_07145 PF00042 Globin HCN55_07145 PF00175 Oxidoreductase NAD-binding domain HCN55_07145 PF00970 Oxidoreductase FAD-binding domain HCN55_07155 PF04239 Protein of unknown function (DUF421) HCN55_07160 PF12867 DinB superfamily HCN55_07165 PF13302 Acetyltransferase (GNAT) domain HCN55_07170 PF00893 Small Multidrug Resistance protein HCN55_07175 PF00893 Small Multidrug Resistance protein HCN55_07180 PF01842 ACT domain HCN55_07180 PF00551 Formyl transferase HCN55_07185 PF01472 PUA domain HCN55_07185 PF00696 Amino acid kinase family HCN55_07190 PF00171 Aldehyde dehydrogenase family HCN55_07195 PF02566 OsmC-like protein HCN55_07200 PF01047 MarR family HCN55_07205 PF02566 OsmC-like protein HCN55_07215 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region HCN55_07220 PF08267 Cobalamin-independent synthase, N-terminal domain HCN55_07220 PF01717 Cobalamin-independent synthase, Catalytic domain HCN55_07225 PF00082 Subtilase family HCN55_07230 PF01740 STAS domain HCN55_07235 PF02361 Cobalt transport protein HCN55_07240 PF00005 ABC transporter HCN55_07245 PF09819 ABC-type cobalt transport system, permease component HCN55_07250 PF07615 YKOF-related Family HCN55_07255 PF00072 Response regulator receiver domain HCN55_07255 PF00486 Transcriptional regulatory protein, C terminal HCN55_07260 PF00512 His Kinase A (phospho-acceptor) domain HCN55_07260 PF00672 HAMP domain HCN55_07260 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HCN55_07265 PF03413 Peptidase propeptide and YPEB domain HCN55_07270 PF03413 Peptidase propeptide and YPEB domain HCN55_07275 PF11132 Transcriptional regulator protein (SplA) HCN55_07280 PF03448 MgtE intracellular N domain HCN55_07280 PF00571 CBS domain HCN55_07280 PF01769 Divalent cation transporter HCN55_07285 PF13411 MerR HTH family regulatory protein HCN55_07300 PF01047 MarR family HCN55_07305 PF06925 Monogalactosyldiacylglycerol (MGDG) synthase HCN55_07315 PF00149 Calcineurin-like phosphoesterase HCN55_07325 PF00535 Glycosyl transferase family 2 HCN55_07330 PF01068 ATP dependent DNA ligase domain HCN55_07335 PF02735 Ku70/Ku80 beta-barrel domain HCN55_07340 PF00563 EAL domain HCN55_07340 PF03707 Bacterial signalling protein N terminal repeat HCN55_07340 PF00990 Diguanylate cyclase, GGDEF domain HCN55_07345 PF09335 SNARE associated Golgi protein HCN55_07350 PF03741 Integral membrane protein TerC family HCN55_07355 PF04542 Sigma-70 region 2 HCN55_07360 PF12791 Anti-sigma factor N-terminus HCN55_07365 PF00269 Small, acid-soluble spore proteins, alpha/beta type HCN55_07370 PF08876 Domain of unknown function (DUF1836) HCN55_07375 PF01435 Peptidase family M48 HCN55_07380 PF02386 Cation transport protein HCN55_07395 PF01757 Acyltransferase family HCN55_07400 PF13188 PAS domain HCN55_07400 PF00989 PAS fold HCN55_07400 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HCN55_07400 PF00512 His Kinase A (phospho-acceptor) domain HCN55_07400 PF13426 PAS domain HCN55_07405 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain HCN55_07405 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain HCN55_07415 PF01008 Initiation factor 2 subunit family HCN55_07420 PF01636 Phosphotransferase enzyme family HCN55_07425 PF00795 Carbon-nitrogen hydrolase HCN55_07430 PF00155 Aminotransferase class I and II HCN55_07435 PF02788 Ribulose bisphosphate carboxylase large chain, N-terminal domain HCN55_07435 PF00016 Ribulose bisphosphate carboxylase large chain, catalytic domain HCN55_07445 PF00596 Class II Aldolase and Adducin N-terminal domain HCN55_07450 PF03079 ARD/ARD' family HCN55_07455 PF06803 Protein of unknown function (DUF1232) HCN55_07460 PF09388 Spo0E like sporulation regulatory protein HCN55_07470 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HCN55_07470 PF00512 His Kinase A (phospho-acceptor) domain HCN55_07470 PF02743 Cache domain HCN55_07475 PF01047 MarR family HCN55_07480 PF13677 Membrane MotB of proton-channel complex MotA/MotB HCN55_07480 PF00691 OmpA family HCN55_07485 PF01618 MotA/TolQ/ExbB proton channel family HCN55_07490 PF10431 C-terminal, D2-small domain, of ClpB protein HCN55_07490 PF07724 AAA domain (Cdc48 subfamily) HCN55_07490 PF17871 AAA lid domain HCN55_07490 PF00004 ATPase family associated with various cellular activities (AAA) HCN55_07500 PF06508 Queuosine biosynthesis protein QueC HCN55_07505 PF01242 6-pyruvoyl tetrahydropterin synthase HCN55_07510 PF04055 Radical SAM superfamily HCN55_07515 PF14489 QueF-like protein HCN55_07520 PF01638 HxlR-like helix-turn-helix HCN55_07530 PF01476 LysM domain HCN55_07535 PF01476 LysM domain HCN55_07545 PF11514 Protein of unknown function (DUF3219) HCN55_07550 PF09953 Uncharacterized protein conserved in bacteria (DUF2187) HCN55_07560 PF07486 Cell Wall Hydrolase HCN55_07565 PF01943 Polysaccharide biosynthesis protein HCN55_07570 PF00578 AhpC/TSA family HCN55_07585 PF01321 Creatinase/Prolidase N-terminal domain HCN55_07585 PF00557 Metallopeptidase family M24 HCN55_07590 PF00356 Bacterial regulatory proteins, lacI family HCN55_07590 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family HCN55_07595 PF00874 PRD domain HCN55_07595 PF03123 CAT RNA binding domain HCN55_07600 PF02378 Phosphotransferase system, EIIC HCN55_07600 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 HCN55_07600 PF00367 phosphotransferase system, EIIB HCN55_07605 PF00381 PTS HPr component phosphorylation site HCN55_07610 PF00391 PEP-utilising enzyme, mobile domain HCN55_07610 PF05524 PEP-utilising enzyme, N-terminal HCN55_07610 PF02896 PEP-utilising enzyme, TIM barrel domain HCN55_07615 PF11132 Transcriptional regulator protein (SplA) HCN55_07625 PF00583 Acetyltransferase (GNAT) family HCN55_07630 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HCN55_07630 PF02743 Cache domain HCN55_07630 PF00672 HAMP domain HCN55_07635 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase HCN55_07635 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase HCN55_07640 PF00188 Cysteine-rich secretory protein family HCN55_07645 PF03717 Penicillin-binding Protein dimerisation domain HCN55_07645 PF00905 Penicillin binding protein transpeptidase domain HCN55_07650 PF08447 PAS fold HCN55_07650 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HCN55_07650 PF00512 His Kinase A (phospho-acceptor) domain HCN55_07650 PF00989 PAS fold HCN55_07655 PF00155 Aminotransferase class I and II HCN55_07665 PF00072 Response regulator receiver domain HCN55_07665 PF01584 CheW-like domain HCN55_07670 PF14177 YkyB-like protein HCN55_07675 PF07690 Major Facilitator Superfamily HCN55_07680 PF01476 LysM domain HCN55_07680 PF03734 L,D-transpeptidase catalytic domain HCN55_07685 PF10518 TAT (twin-arginine translocation) pathway signal sequence HCN55_07685 PF00149 Calcineurin-like phosphoesterase HCN55_07695 PF01471 Putative peptidoglycan binding domain HCN55_07695 PF08924 Domain of unknown function (DUF1906) HCN55_07710 PF10388 EAL-domain associated signalling protein domain HCN55_07710 PF00563 EAL domain HCN55_07715 PF08796 Protein of unknown function (DUF1797) HCN55_07720 PF04308 Ribonuclease H-like HCN55_07725 PF14156 Antirepressor AbbA HCN55_07735 PF03466 LysR substrate binding domain HCN55_07735 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HCN55_07740 PF00258 Flavodoxin HCN55_07750 PF00258 Flavodoxin HCN55_07755 PF14602 Hexapeptide repeat of succinyl-transferase HCN55_07755 PF00132 Bacterial transferase hexapeptide (six repeats) HCN55_07755 PF08503 Tetrahydrodipicolinate succinyltransferase N-terminal HCN55_07760 PF07687 Peptidase dimerisation domain HCN55_07760 PF01546 Peptidase family M20/M25/M40 HCN55_07765 PF03698 Uncharacterised protein family (UPF0180) HCN55_07770 PF00924 Mechanosensitive ion channel HCN55_07775 PF00578 AhpC/TSA family HCN55_07775 PF10417 C-terminal domain of 1-Cys peroxiredoxin HCN55_07780 PF00578 AhpC/TSA family HCN55_07795 PF12804 MobA-like NTP transferase domain HCN55_07800 PF00899 ThiF family HCN55_07805 PF03453 MoeA N-terminal region (domain I and II) HCN55_07805 PF03454 MoeA C-terminal region (domain IV) HCN55_07805 PF00994 Probable molybdopterin binding domain HCN55_07810 PF03205 Molybdopterin guanine dinucleotide synthesis protein B HCN55_07815 PF02391 MoaE protein HCN55_07820 PF02597 ThiS family HCN55_07825 PF00005 ABC transporter HCN55_07825 PF00664 ABC transporter transmembrane region HCN55_07830 PF00664 ABC transporter transmembrane region HCN55_07830 PF00005 ABC transporter HCN55_07835 PF04893 Yip1 domain HCN55_07840 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion HCN55_07845 PF00005 ABC transporter HCN55_07850 PF02687 FtsX-like permease family HCN55_07850 PF12704 MacB-like periplasmic core domain HCN55_07855 PF00455 DeoR C terminal sensor domain HCN55_07855 PF08220 DeoR-like helix-turn-helix domain HCN55_07860 PF00294 pfkB family carbohydrate kinase HCN55_07865 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 HCN55_07865 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit HCN55_07870 PF10502 Signal peptidase, peptidase S26 HCN55_07880 PF12848 ABC transporter HCN55_07880 PF00005 ABC transporter HCN55_07885 PF08546 Ketopantoate reductase PanE/ApbA C terminal HCN55_07885 PF02558 Ketopantoate reductase PanE/ApbA HCN55_07890 PF02073 Thermophilic metalloprotease (M29) HCN55_07895 PF17447 Uncharacterized YkpC-like HCN55_07905 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin HCN55_07905 PF18277 AbrB C-terminal domain HCN55_07910 PF00512 His Kinase A (phospho-acceptor) domain HCN55_07910 PF00989 PAS fold HCN55_07910 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HCN55_07915 PF06094 Gamma-glutamyl cyclotransferase, AIG2-like HCN55_07920 PF02080 TrkA-C domain HCN55_07920 PF02254 TrkA-N domain HCN55_07925 PF01979 Amidohydrolase family HCN55_07925 PF13382 Adenine deaminase C-terminal domain HCN55_07930 PF00753 Metallo-beta-lactamase superfamily HCN55_07930 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain HCN55_07930 PF17770 Ribonuclease J C-terminal domain HCN55_07945 PF01327 Polypeptide deformylase HCN55_07955 PF10368 Putative cell-wall binding lipoprotein HCN55_07960 PF00676 Dehydrogenase E1 component HCN55_07965 PF02780 Transketolase, C-terminal domain HCN55_07965 PF02779 Transketolase, pyrimidine binding domain HCN55_07970 PF00364 Biotin-requiring enzyme HCN55_07970 PF02817 e3 binding domain HCN55_07970 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) HCN55_07975 PF07992 Pyridine nucleotide-disulphide oxidoreductase HCN55_07975 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain HCN55_07985 PF13790 SR1 protein HCN55_07990 PF01276 Orn/Lys/Arg decarboxylase, major domain HCN55_07990 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain HCN55_07995 PF05256 Uncharacterised protein family (UPF0223) HCN55_08000 PF06335 Protein of unknown function (DUF1054) HCN55_08010 PF00459 Inositol monophosphatase family HCN55_08015 PF00583 Acetyltransferase (GNAT) family HCN55_08020 PF04072 Leucine carboxyl methyltransferase HCN55_08025 PF03413 Peptidase propeptide and YPEB domain HCN55_08025 PF01447 Thermolysin metallopeptidase, catalytic domain HCN55_08025 PF02868 Thermolysin metallopeptidase, alpha-helical domain HCN55_08025 PF07504 Fungalysin/Thermolysin Propeptide Motif HCN55_08040 PF08281 Sigma-70, region 4 HCN55_08040 PF04542 Sigma-70 region 2 HCN55_08045 PF13490 Putative zinc-finger HCN55_08055 PF17259 Family of unknown function (DUF5325) HCN55_08065 PF14036 YlaH-like protein HCN55_08070 PF09963 Uncharacterized protein conserved in bacteria (DUF2197) HCN55_08075 PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) HCN55_08080 PF13638 PIN domain HCN55_08080 PF02562 PhoH-like protein HCN55_08090 PF04960 Glutaminase HCN55_08095 PF07408 Protein of unknown function (DUF1507) HCN55_08100 PF01098 Cell cycle protein HCN55_08105 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain HCN55_08105 PF00364 Biotin-requiring enzyme HCN55_08105 PF02436 Conserved carboxylase domain HCN55_08105 PF02785 Biotin carboxylase C-terminal domain HCN55_08105 PF00289 Biotin carboxylase, N-terminal domain HCN55_08105 PF00682 HMGL-like HCN55_08110 PF02628 Cytochrome oxidase assembly protein HCN55_08115 PF01040 UbiA prenyltransferase family HCN55_08120 PF00116 Cytochrome C oxidase subunit II, periplasmic domain HCN55_08120 PF00034 Cytochrome c HCN55_08120 PF02790 Cytochrome C oxidase subunit II, transmembrane domain HCN55_08125 PF00115 Cytochrome C and Quinol oxidase polypeptide I HCN55_08130 PF00510 Cytochrome c oxidase subunit III HCN55_08135 PF03626 Prokaryotic Cytochrome C oxidase subunit IV HCN55_08140 PF09678 Cytochrome c oxidase caa3 assembly factor (Caa3_CtaG) HCN55_08145 PF08868 YugN-like family HCN55_08150 PF00571 CBS domain HCN55_08155 PF14504 CAP-associated N-terminal HCN55_08155 PF00188 Cysteine-rich secretory protein family HCN55_08160 PF14071 Putative coat protein HCN55_08165 PF14003 YlbE-like protein HCN55_08170 PF06133 Control of competence regulator ComK, YlbF/YmcA HCN55_08175 PF09902 Uncharacterized protein conserved in bacteria (DUF2129) HCN55_08185 PF01467 Cytidylyltransferase-like HCN55_08190 PF07670 Nucleoside recognition HCN55_08195 PF01734 Patatin-like phospholipase HCN55_08200 PF05362 Lon protease (S16) C-terminal proteolytic domain HCN55_08200 PF13180 PDZ domain HCN55_08205 PF05636 HIGH Nucleotidyl Transferase HCN55_08215 PF02620 Large ribosomal RNA subunit accumulation protein YceD HCN55_08220 PF01783 Ribosomal L32p protein family HCN55_08230 PF00583 Acetyltransferase (GNAT) family HCN55_08235 PF02558 Ketopantoate reductase PanE/ApbA HCN55_08235 PF08546 Ketopantoate reductase PanE/ApbA C terminal HCN55_08240 PF10079 Bacillithiol biosynthesis BshC HCN55_08245 PF02381 MraZ protein, putative antitoxin-like HCN55_08250 PF01795 MraW methylase family HCN55_08265 PF03717 Penicillin-binding Protein dimerisation domain HCN55_08265 PF00905 Penicillin binding protein transpeptidase domain HCN55_08265 PF03793 PASTA domain HCN55_08270 PF08245 Mur ligase middle domain HCN55_08270 PF02875 Mur ligase family, glutamate ligase domain HCN55_08270 PF01225 Mur ligase family, catalytic domain HCN55_08275 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 HCN55_08275 PF00953 Glycosyl transferase family 4 HCN55_08280 PF02875 Mur ligase family, glutamate ligase domain HCN55_08280 PF08245 Mur ligase middle domain HCN55_08285 PF01098 Cell cycle protein HCN55_08290 PF04101 Glycosyltransferase family 28 C-terminal domain HCN55_08290 PF03033 Glycosyltransferase family 28 N-terminal domain HCN55_08295 PF01565 FAD binding domain HCN55_08295 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain HCN55_08300 PF08478 POTRA domain, FtsQ-type HCN55_08305 PF05949 Bacterial protein of unknown function (DUF881) HCN55_08310 PF05949 Bacterial protein of unknown function (DUF881) HCN55_08315 PF06947 Protein of unknown function (DUF1290) HCN55_08320 PF02491 SHS2 domain inserted in FTSA HCN55_08325 PF00091 Tubulin/FtsZ family, GTPase domain HCN55_08325 PF12327 FtsZ family, C-terminal domain HCN55_08330 PF00082 Subtilase family HCN55_08330 PF05922 Peptidase inhibitor I9 HCN55_08335 PF03419 Sporulation factor SpoIIGA HCN55_08340 PF04542 Sigma-70 region 2 HCN55_08340 PF04545 Sigma-70, region 4 HCN55_08345 PF04542 Sigma-70 region 2 HCN55_08345 PF04539 Sigma-70 region 3 HCN55_08345 PF04545 Sigma-70, region 4 HCN55_08350 PF00005 ABC transporter HCN55_08355 PF01546 Peptidase family M20/M25/M40 HCN55_08355 PF07687 Peptidase dimerisation domain HCN55_08360 PF05239 PRC-barrel domain HCN55_08370 PF01168 Alanine racemase, N-terminal domain HCN55_08375 PF04472 Cell division protein SepF HCN55_08380 PF02325 YGGT family HCN55_08385 PF01479 S4 domain HCN55_08385 PF17774 Putative RNA-binding domain in YlmH HCN55_08390 PF05103 DivIVA protein HCN55_08395 PF00133 tRNA synthetases class I (I, L, M and V) HCN55_08395 PF08264 Anticodon-binding domain of tRNA HCN55_08400 PF01258 Prokaryotic dksA/traR C4-type zinc finger HCN55_08405 PF01252 Signal peptidase (SPase) II HCN55_08410 PF01479 S4 domain HCN55_08410 PF00849 RNA pseudouridylate synthase HCN55_08415 PF00156 Phosphoribosyl transferase domain HCN55_08420 PF00860 Permease family HCN55_08425 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain HCN55_08425 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain HCN55_08430 PF01979 Amidohydrolase family HCN55_08435 PF00117 Glutamine amidotransferase class-I HCN55_08435 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain HCN55_08440 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain HCN55_08440 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain HCN55_08440 PF02142 MGS-like domain HCN55_08445 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B HCN55_08445 PF00175 Oxidoreductase NAD-binding domain HCN55_08450 PF01180 Dihydroorotate dehydrogenase HCN55_08455 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family HCN55_08460 PF00156 Phosphoribosyl transferase domain HCN55_08465 PF01507 Phosphoadenosine phosphosulfate reductase family HCN55_08470 PF01384 Phosphate transporter family HCN55_08475 PF14306 PUA-like domain HCN55_08475 PF01747 ATP-sulfurylase HCN55_08485 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases HCN55_08490 PF01903 CbiX HCN55_08500 PF05670 NFACT protein RNA binding domain HCN55_08505 PF00689 Cation transporting ATPase, C-terminus HCN55_08505 PF00690 Cation transporter/ATPase, N-terminus HCN55_08510 PF08340 Domain of unknown function (DUF1732) HCN55_08510 PF03755 YicC-like family, N-terminal region HCN55_08515 PF04025 Domain of unknown function (DUF370) HCN55_08520 PF00625 Guanylate kinase HCN55_08525 PF01192 RNA polymerase Rpb6 HCN55_08530 PF04127 DNA / pantothenate metabolism flavoprotein HCN55_08530 PF02441 Flavoprotein HCN55_08535 PF04851 Type III restriction enzyme, res subunit HCN55_08535 PF00271 Helicase conserved C-terminal domain HCN55_08535 PF17764 3′ DNA-binding domain (3′BD) HCN55_08535 PF18074 Primosomal protein N C-terminal domain HCN55_08535 PF18319 PriA DNA helicase Cys-rich region (CRR) domain HCN55_08540 PF01327 Polypeptide deformylase HCN55_08545 PF00551 Formyl transferase HCN55_08545 PF02911 Formyl transferase, C-terminal domain HCN55_08550 PF01029 NusB family HCN55_08550 PF01189 16S rRNA methyltransferase RsmB/F HCN55_08555 PF04055 Radical SAM superfamily HCN55_08565 PF00069 Protein kinase domain HCN55_08565 PF03793 PASTA domain HCN55_08570 PF03193 RsgA GTPase HCN55_08570 PF16745 RsgA N-terminal domain HCN55_08575 PF00834 Ribulose-phosphate 3 epimerase family HCN55_08580 PF04263 Thiamin pyrophosphokinase, catalytic domain HCN55_08580 PF04265 Thiamin pyrophosphokinase, vitamin B1 binding domain HCN55_08585 PF08183 Stage V sporulation protein family HCN55_08590 PF00830 Ribosomal L28 family HCN55_08595 PF03780 Asp23 family, cell envelope-related function HCN55_08600 PF02734 DAK2 domain HCN55_08600 PF13684 Dihydroxyacetone kinase family HCN55_08605 PF03315 Serine dehydratase beta chain HCN55_08605 PF01842 ACT domain HCN55_08610 PF03313 Serine dehydratase alpha chain HCN55_08615 PF00271 Helicase conserved C-terminal domain HCN55_08615 PF00270 DEAD/DEAH box helicase HCN55_08615 PF17191 RecG wedge domain HCN55_08620 PF03061 Thioesterase superfamily HCN55_08625 PF02504 Fatty acid synthesis protein HCN55_08630 PF00698 Acyl transferase domain HCN55_08640 PF00550 Phosphopantetheine attachment site HCN55_08645 PF00035 Double-stranded RNA binding motif HCN55_08645 PF14622 Ribonuclease-III-like HCN55_08650 PF02463 RecF/RecN/SMC N terminal domain HCN55_08650 PF06470 SMC proteins Flexible Hinge Domain HCN55_08655 PF02881 SRP54-type protein, helical bundle domain HCN55_08655 PF00448 SRP54-type protein, GTPase domain HCN55_08660 PF02369 Bacterial Ig-like domain (group 1) HCN55_08665 PF04297 Putative helix-turn-helix protein, YlxM / p13 like HCN55_08670 PF02978 Signal peptide binding domain HCN55_08670 PF00448 SRP54-type protein, GTPase domain HCN55_08670 PF02881 SRP54-type protein, helical bundle domain HCN55_08675 PF00886 Ribosomal protein S16 HCN55_08685 PF11068 YlqD protein HCN55_08690 PF01782 RimM N-terminal domain HCN55_08690 PF05239 PRC-barrel domain HCN55_08695 PF01746 tRNA (Guanine-1)-methyltransferase HCN55_08700 PF01245 Ribosomal protein L19 HCN55_08705 PF01926 50S ribosome-binding GTPase HCN55_08710 PF01351 Ribonuclease HII HCN55_08720 PF01312 FlhB HrpN YscU SpaS Family HCN55_08725 PF08442 ATP-grasp domain HCN55_08725 PF00549 CoA-ligase HCN55_08730 PF02629 CoA binding domain HCN55_08730 PF00549 CoA-ligase HCN55_08735 PF02481 DNA recombination-mediator protein A HCN55_08740 PF01396 Topoisomerase DNA binding C4 zinc finger HCN55_08740 PF01131 DNA topoisomerase HCN55_08740 PF01751 Toprim domain HCN55_08745 PF01134 Glucose inhibited division protein A HCN55_08750 PF02899 Phage integrase, N-terminal SAM-like domain HCN55_08750 PF00589 Phage integrase family HCN55_08755 PF00227 Proteasome subunit HCN55_08760 PF10431 C-terminal, D2-small domain, of ClpB protein HCN55_08760 PF00004 ATPase family associated with various cellular activities (AAA) HCN55_08760 PF07724 AAA domain (Cdc48 subfamily) HCN55_08765 PF08222 CodY helix-turn-helix domain HCN55_08765 PF06018 CodY GAF-like domain HCN55_08770 PF00460 Flagella basal body rod protein HCN55_08775 PF00460 Flagella basal body rod protein HCN55_08775 PF06429 Flagellar basal body rod FlgEFG protein C-terminal HCN55_08780 PF02049 Flagellar hook-basal body complex protein FliE HCN55_08785 PF01514 Secretory protein of YscJ/FliF family HCN55_08785 PF08345 Flagellar M-ring protein C-terminal HCN55_08790 PF14842 FliG N-terminal domain HCN55_08790 PF14841 FliG middle domain HCN55_08790 PF01706 FliG C-terminal domain HCN55_08795 PF02108 Flagellar assembly protein FliH HCN55_08800 PF18269 T3SS EscN ATPase C-terminal domain HCN55_08800 PF02874 ATP synthase alpha/beta family, beta-barrel domain HCN55_08800 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain HCN55_08805 PF02050 Flagellar FliJ protein HCN55_08810 PF03448 MgtE intracellular N domain HCN55_08815 PF02120 Flagellar hook-length control protein FliK HCN55_08820 PF03963 Flagellar hook capping protein - N-terminal region HCN55_08825 PF00460 Flagella basal body rod protein HCN55_08825 PF06429 Flagellar basal body rod FlgEFG protein C-terminal HCN55_08830 PF06289 Flagellar and Swarming motility proteins HCN55_08835 PF03748 Flagellar basal body-associated protein FliL HCN55_08840 PF02154 Flagellar motor switch protein FliM HCN55_08840 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term HCN55_08845 PF04509 CheC-like family HCN55_08845 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term HCN55_08850 PF00072 Response regulator receiver domain HCN55_08855 PF04347 Flagellar biosynthesis protein, FliO HCN55_08860 PF00813 FliP family HCN55_08865 PF01313 Bacterial export proteins, family 3 HCN55_08870 PF01311 Bacterial export proteins, family 1 HCN55_08875 PF01312 FlhB HrpN YscU SpaS Family HCN55_08880 PF00771 FHIPEP family HCN55_08885 PF00448 SRP54-type protein, GTPase domain HCN55_08890 PF10609 NUBPL iron-transfer P-loop NTPase HCN55_08895 PF01339 CheB methylesterase HCN55_08895 PF00072 Response regulator receiver domain HCN55_08900 PF01584 CheW-like domain HCN55_08900 PF02895 Signal transducing histidine kinase, homodimeric domain HCN55_08900 PF07194 P2 response regulator binding domain HCN55_08900 PF01627 Hpt domain HCN55_08900 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HCN55_08905 PF01584 CheW-like domain HCN55_08910 PF04509 CheC-like family HCN55_08915 PF03975 CheD chemotactic sensory transduction HCN55_08920 PF04539 Sigma-70 region 3 HCN55_08920 PF04545 Sigma-70, region 4 HCN55_08920 PF04542 Sigma-70 region 2 HCN55_08930 PF00318 Ribosomal protein S2 HCN55_08935 PF00889 Elongation factor TS HCN55_08940 PF00696 Amino acid kinase family HCN55_08945 PF01765 Ribosome recycling factor HCN55_08950 PF01255 Putative undecaprenyl diphosphate synthase HCN55_08960 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase HCN55_08960 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain HCN55_08960 PF13288 DXP reductoisomerase C-terminal domain HCN55_08965 PF17820 PDZ domain HCN55_08965 PF02163 Peptidase family M50 HCN55_08970 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) HCN55_08970 PF03129 Anticodon binding domain HCN55_08970 PF04073 Aminoacyl-tRNA editing domain HCN55_08975 PF00929 Exonuclease HCN55_08975 PF02811 PHP domain HCN55_08975 PF11490 DNA polymerase III polC-type N-terminus II HCN55_08975 PF14480 DNA polymerase III polC-type N-terminus I HCN55_08975 PF07733 Bacterial DNA polymerase III alpha NTPase domain HCN55_08975 PF17657 Bacterial DNA polymerase III alpha subunit finger domain HCN55_08975 PF14579 Helix-hairpin-helix motif HCN55_08980 PF02576 RimP N-terminal domain HCN55_08980 PF17384 RimP C-terminal SH3 domain HCN55_08985 PF13184 NusA-like KH domain HCN55_08985 PF08529 NusA N-terminal domain HCN55_08985 PF00575 S1 RNA binding domain HCN55_08990 PF04296 Protein of unknown function (DUF448) HCN55_08995 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family HCN55_09000 PF00009 Elongation factor Tu GTP binding domain HCN55_09000 PF04760 Translation initiation factor IF-2, N-terminal region HCN55_09000 PF11987 Translation-initiation factor 2 HCN55_09005 PF04456 Protein of unknown function (DUF503) HCN55_09010 PF02033 Ribosome-binding factor A HCN55_09015 PF16198 tRNA pseudouridylate synthase B C-terminal domain HCN55_09015 PF01509 TruB family pseudouridylate synthase (N terminal domain) HCN55_09020 PF01687 Riboflavin kinase HCN55_09020 PF06574 FAD synthetase HCN55_09025 PF00312 Ribosomal protein S15 HCN55_09030 PF00013 KH domain HCN55_09030 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain HCN55_09030 PF01138 3' exoribonuclease family, domain 1 HCN55_09030 PF00575 S1 RNA binding domain HCN55_09030 PF03725 3' exoribonuclease family, domain 2 HCN55_09035 PF01522 Polysaccharide deacetylase HCN55_09040 PF00675 Insulinase (Peptidase family M16) HCN55_09040 PF05193 Peptidase M16 inactive domain HCN55_09045 PF05239 PRC-barrel domain HCN55_09050 PF01262 Alanine dehydrogenase/PNT, C-terminal domain HCN55_09050 PF16924 Dipicolinate synthase subunit A N-terminal domain HCN55_09055 PF02441 Flavoprotein HCN55_09060 PF01118 Semialdehyde dehydrogenase, NAD binding domain HCN55_09060 PF02774 Semialdehyde dehydrogenase, dimerisation domain HCN55_09065 PF13840 ACT domain HCN55_09065 PF00696 Amino acid kinase family HCN55_09070 PF00701 Dihydrodipicolinate synthetase family HCN55_09075 PF17770 Ribonuclease J C-terminal domain HCN55_09075 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain HCN55_09075 PF00753 Metallo-beta-lactamase superfamily HCN55_09080 PF00574 Clp protease HCN55_09085 PF14035 YlzJ-like protein HCN55_09090 PF01580 FtsK/SpoIIIE family HCN55_09090 PF09397 Ftsk gamma domain HCN55_09090 PF17854 FtsK alpha domain HCN55_09095 PF07702 UTRA domain HCN55_09095 PF00392 Bacterial regulatory proteins, gntR family HCN55_09100 PF07690 Major Facilitator Superfamily HCN55_09105 PF05193 Peptidase M16 inactive domain HCN55_09110 PF00675 Insulinase (Peptidase family M16) HCN55_09110 PF05193 Peptidase M16 inactive domain HCN55_09120 PF11588 Protein of unknown function (DUF3243) HCN55_09130 PF13464 Domain of unknown function (DUF4115) HCN55_09135 PF01066 CDP-alcohol phosphatidyltransferase HCN55_09140 PF02464 Competence-damaged protein HCN55_09140 PF00994 Probable molybdopterin binding domain HCN55_09140 PF18146 Damage-inducible protein CinA KH domain HCN55_09145 PF00154 recA bacterial DNA recombination protein HCN55_09150 PF00144 Beta-lactamase HCN55_09155 PF00013 KH domain HCN55_09155 PF01966 HD domain HCN55_09155 PF12072 Domain of unknown function (DUF3552) HCN55_09160 PF13277 YmdB-like protein HCN55_09165 PF04232 Stage V sporulation protein S (SpoVS) HCN55_09170 PF08240 Alcohol dehydrogenase GroES-like domain HCN55_09170 PF00107 Zinc-binding dehydrogenase HCN55_09175 PF00155 Aminotransferase class I and II HCN55_09180 PF01938 TRAM domain HCN55_09180 PF00919 Uncharacterized protein family UPF0004 HCN55_09180 PF04055 Radical SAM superfamily HCN55_09185 PF06133 Control of competence regulator ComK, YlbF/YmcA HCN55_09190 PF10628 Outer spore coat protein E (CotE) HCN55_09195 PF01624 MutS domain I HCN55_09195 PF05192 MutS domain III HCN55_09195 PF00488 MutS domain V HCN55_09195 PF05188 MutS domain II HCN55_09195 PF05190 MutS family domain IV HCN55_09200 PF01119 DNA mismatch repair protein, C-terminal domain HCN55_09200 PF08676 MutL C terminal dimerisation domain HCN55_09205 PF14184 Regulatory protein YrvL HCN55_09215 PF00440 Bacterial regulatory proteins, tetR family HCN55_09215 PF13977 BetI-type transcriptional repressor, C-terminal HCN55_09220 PF00753 Metallo-beta-lactamase superfamily HCN55_09230 PF00698 Acyl transferase domain HCN55_09235 PF00698 Acyl transferase domain HCN55_09240 PF03060 Nitronate monooxygenase HCN55_09240 PF00698 Acyl transferase domain HCN55_09245 PF00550 Phosphopantetheine attachment site HCN55_09250 PF02801 Beta-ketoacyl synthase, C-terminal domain HCN55_09250 PF00109 Beta-ketoacyl synthase, N-terminal domain HCN55_09255 PF01154 Hydroxymethylglutaryl-coenzyme A synthase N terminal HCN55_09255 PF08540 Hydroxymethylglutaryl-coenzyme A synthase C terminal HCN55_09260 PF00378 Enoyl-CoA hydratase/isomerase HCN55_09265 PF00378 Enoyl-CoA hydratase/isomerase HCN55_09270 PF16197 Ketoacyl-synthetase C-terminal extension HCN55_09270 PF00550 Phosphopantetheine attachment site HCN55_09270 PF08659 KR domain HCN55_09270 PF00668 Condensation domain HCN55_09270 PF00109 Beta-ketoacyl synthase, N-terminal domain HCN55_09270 PF13193 AMP-binding enzyme C-terminal domain HCN55_09270 PF14765 Polyketide synthase dehydratase HCN55_09270 PF00501 AMP-binding enzyme HCN55_09270 PF02801 Beta-ketoacyl synthase, C-terminal domain HCN55_09275 PF02801 Beta-ketoacyl synthase, C-terminal domain HCN55_09275 PF16197 Ketoacyl-synthetase C-terminal extension HCN55_09275 PF00109 Beta-ketoacyl synthase, N-terminal domain HCN55_09275 PF14765 Polyketide synthase dehydratase HCN55_09275 PF00550 Phosphopantetheine attachment site HCN55_09275 PF08659 KR domain HCN55_09280 PF14765 Polyketide synthase dehydratase HCN55_09280 PF08242 Methyltransferase domain HCN55_09280 PF00550 Phosphopantetheine attachment site HCN55_09280 PF02801 Beta-ketoacyl synthase, C-terminal domain HCN55_09280 PF00109 Beta-ketoacyl synthase, N-terminal domain HCN55_09280 PF16197 Ketoacyl-synthetase C-terminal extension HCN55_09280 PF08659 KR domain HCN55_09285 PF08659 KR domain HCN55_09285 PF00501 AMP-binding enzyme HCN55_09285 PF13193 AMP-binding enzyme C-terminal domain HCN55_09285 PF00668 Condensation domain HCN55_09285 PF00109 Beta-ketoacyl synthase, N-terminal domain HCN55_09285 PF02801 Beta-ketoacyl synthase, C-terminal domain HCN55_09285 PF00550 Phosphopantetheine attachment site HCN55_09285 PF16197 Ketoacyl-synthetase C-terminal extension HCN55_09285 PF14765 Polyketide synthase dehydratase HCN55_09290 PF00975 Thioesterase domain HCN55_09290 PF00109 Beta-ketoacyl synthase, N-terminal domain HCN55_09290 PF16197 Ketoacyl-synthetase C-terminal extension HCN55_09290 PF14765 Polyketide synthase dehydratase HCN55_09290 PF00550 Phosphopantetheine attachment site HCN55_09290 PF02801 Beta-ketoacyl synthase, C-terminal domain HCN55_09290 PF08242 Methyltransferase domain HCN55_09295 PF00067 Cytochrome P450 HCN55_09310 PF00082 Subtilase family HCN55_09315 PF05908 Poly-gamma-glutamate hydrolase HCN55_09320 PF02566 OsmC-like protein HCN55_09325 PF00893 Small Multidrug Resistance protein HCN55_09330 PF00893 Small Multidrug Resistance protein HCN55_09340 PF12788 YmaF family HCN55_09350 PF17209 Hfq protein HCN55_09355 PF14157 YmzC-like protein HCN55_09365 PF07972 NrdI Flavodoxin like HCN55_09370 PF02867 Ribonucleotide reductase, barrel domain HCN55_09370 PF00317 Ribonucleotide reductase, all-alpha domain HCN55_09370 PF08343 Ribonucleotide reductase N-terminal HCN55_09375 PF00268 Ribonucleotide reductase, small chain HCN55_09385 PF01520 N-acetylmuramoyl-L-alanine amidase HCN55_09385 PF05036 Sporulation related domain HCN55_09390 PF00004 ATPase family associated with various cellular activities (AAA) HCN55_09390 PF17866 AAA lid domain HCN55_09395 PF16360 GTP-binding GTPase Middle Region HCN55_09395 PF13167 GTP-binding GTPase N-terminal HCN55_09395 PF01926 50S ribosome-binding GTPase HCN55_09400 PF06838 Methionine gamma-lyase HCN55_09405 PF13411 MerR HTH family regulatory protein HCN55_09410 PF03951 Glutamine synthetase, beta-Grasp domain HCN55_09410 PF00120 Glutamine synthetase, catalytic domain HCN55_09440 PF13302 Acetyltransferase (GNAT) domain HCN55_09450 PF13021 Domain of unknown function (DUF3885) HCN55_09480 PF04616 Glycosyl hydrolases family 43 HCN55_09480 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain HCN55_09485 PF00480 ROK family HCN55_09490 PF01261 Xylose isomerase-like TIM barrel HCN55_09495 PF00370 FGGY family of carbohydrate kinases, N-terminal domain HCN55_09495 PF02782 FGGY family of carbohydrate kinases, C-terminal domain HCN55_09505 PF00565 Staphylococcal nuclease homologue HCN55_09510 PF00083 Sugar (and other) transporter HCN55_09515 PF01168 Alanine racemase, N-terminal domain HCN55_09515 PF00842 Alanine racemase, C-terminal domain HCN55_09520 PF10903 Protein of unknown function (DUF2691) HCN55_09525 PF00692 dUTPase HCN55_09540 PF00303 Thymidylate synthase HCN55_09550 PF15493 Domain of unknown function, YrpD HCN55_09555 PF14037 YoqO-like protein HCN55_09580 PF08327 Activator of Hsp90 ATPase homolog 1-like protein HCN55_09590 PF03323 Bacillus/Clostridium GerA spore germination protein HCN55_09595 PF03845 Spore germination protein HCN55_09600 PF05504 Spore germination B3/ GerAC like, C-terminal HCN55_09610 PF13761 Domain of unknown function (DUF4166) HCN55_09615 PF14158 YndJ-like protein HCN55_09625 PF05908 Poly-gamma-glutamate hydrolase HCN55_09630 PF10710 Protein of unknown function (DUF2512) HCN55_09635 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily HCN55_09640 PF00717 Peptidase S24-like HCN55_09640 PF01726 LexA DNA binding domain HCN55_09645 PF01476 LysM domain HCN55_09650 PF00239 Resolvase, N terminal domain HCN55_09655 PF05979 Bacterial protein of unknown function (DUF896) HCN55_09660 PF00456 Transketolase, thiamine diphosphate binding domain HCN55_09660 PF02780 Transketolase, C-terminal domain HCN55_09660 PF02779 Transketolase, pyrimidine binding domain HCN55_09665 PF10747 Sporulation inhibitor of replication protein SirA HCN55_09670 PF03672 Uncharacterised protein family (UPF0154) HCN55_09675 PF09388 Spo0E like sporulation regulatory protein HCN55_09680 PF02683 Cytochrome C biogenesis protein transmembrane region HCN55_09685 PF00072 Response regulator receiver domain HCN55_09690 PF07301 Protein of unknown function (DUF1453) HCN55_09695 PF11084 Protein of unknown function (DUF2621) HCN55_09705 PF08179 Small acid-soluble spore protein P family HCN55_09715 PF00694 Aconitase C-terminal domain HCN55_09715 PF00330 Aconitase family (aconitate hydratase) HCN55_09720 PF00578 AhpC/TSA family HCN55_09725 PF13040 Fur-regulated basic protein B HCN55_09730 PF08177 Small acid-soluble spore protein N family HCN55_09740 PF03061 Thioesterase superfamily HCN55_09750 PF01521 Iron-sulphur cluster biosynthesis HCN55_09755 PF02660 Glycerol-3-phosphate acyltransferase HCN55_09760 PF13380 CoA binding domain HCN55_09765 PF00204 DNA gyrase B HCN55_09765 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HCN55_09765 PF00986 DNA gyrase B subunit, carboxyl terminus HCN55_09765 PF01751 Toprim domain HCN55_09770 PF00521 DNA gyrase/topoisomerase IV, subunit A HCN55_09770 PF03989 DNA gyrase C-terminal domain, beta-propeller HCN55_09780 PF01235 Sodium:alanine symporter family HCN55_09790 PF17452 Uncharacterized YnfE-like HCN55_09795 PF17189 Glycosyl hydrolase family 30 beta sandwich domain HCN55_09800 PF03422 Carbohydrate binding module (family 6) HCN55_09800 PF04616 Glycosyl hydrolases family 43 HCN55_09805 PF04138 GtrA-like protein HCN55_09810 PF00483 Nucleotidyl transferase HCN55_09815 PF09335 SNARE associated Golgi protein HCN55_09825 PF01039 Carboxyl transferase domain HCN55_09830 PF00378 Enoyl-CoA hydratase/isomerase HCN55_09835 PF00682 HMGL-like HCN55_09840 PF00364 Biotin-requiring enzyme HCN55_09845 PF00289 Biotin carboxylase, N-terminal domain HCN55_09845 PF02785 Biotin carboxylase C-terminal domain HCN55_09845 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain HCN55_09850 PF13193 AMP-binding enzyme C-terminal domain HCN55_09850 PF00501 AMP-binding enzyme HCN55_09855 PF02771 Acyl-CoA dehydrogenase, N-terminal domain HCN55_09855 PF00441 Acyl-CoA dehydrogenase, C-terminal domain HCN55_09855 PF02770 Acyl-CoA dehydrogenase, middle domain HCN55_09860 PF17329 Family of unknown function (DUF5367) HCN55_09870 PF02638 Glycosyl hydrolase-like 10 HCN55_09875 PF07098 Protein of unknown function (DUF1360) HCN55_09880 PF13193 AMP-binding enzyme C-terminal domain HCN55_09880 PF00501 AMP-binding enzyme HCN55_09880 PF00975 Thioesterase domain HCN55_09880 PF00668 Condensation domain HCN55_09880 PF00550 Phosphopantetheine attachment site HCN55_09885 PF00550 Phosphopantetheine attachment site HCN55_09885 PF00668 Condensation domain HCN55_09885 PF13193 AMP-binding enzyme C-terminal domain HCN55_09885 PF00501 AMP-binding enzyme HCN55_09890 PF00668 Condensation domain HCN55_09890 PF00550 Phosphopantetheine attachment site HCN55_09890 PF13193 AMP-binding enzyme C-terminal domain HCN55_09890 PF00501 AMP-binding enzyme HCN55_09895 PF00550 Phosphopantetheine attachment site HCN55_09895 PF00501 AMP-binding enzyme HCN55_09895 PF13193 AMP-binding enzyme C-terminal domain HCN55_09895 PF00668 Condensation domain HCN55_09900 PF00501 AMP-binding enzyme HCN55_09900 PF13193 AMP-binding enzyme C-terminal domain HCN55_09900 PF00668 Condensation domain HCN55_09900 PF00550 Phosphopantetheine attachment site HCN55_09905 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family HCN55_09910 PF01263 Aldose 1-epimerase HCN55_09915 PF01554 MatE HCN55_09920 PF16800 IseA DL-endopeptidase inhibitor HCN55_09930 PF00589 Phage integrase family HCN55_09935 PF12728 Helix-turn-helix domain HCN55_09945 PF03466 LysR substrate binding domain HCN55_09945 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HCN55_09950 PF00107 Zinc-binding dehydrogenase HCN55_09950 PF08240 Alcohol dehydrogenase GroES-like domain HCN55_09955 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster HCN55_09955 PF07992 Pyridine nucleotide-disulphide oxidoreductase HCN55_09960 PF01493 GXGXG motif HCN55_09960 PF01645 Conserved region in glutamate synthase HCN55_09960 PF04898 Glutamate synthase central domain HCN55_09960 PF00310 Glutamine amidotransferases class-II HCN55_09965 PF03466 LysR substrate binding domain HCN55_09965 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HCN55_09970 PF01472 PUA domain HCN55_09970 PF00696 Amino acid kinase family HCN55_09975 PF03807 NADP oxidoreductase coenzyme F420-dependent HCN55_09975 PF14748 Pyrroline-5-carboxylate reductase dimerisation HCN55_09980 PF02334 Replication terminator protein HCN55_09985 PF00106 short chain dehydrogenase HCN55_09990 PF06103 Bacterial protein of unknown function (DUF948) HCN55_10000 PF13302 Acetyltransferase (GNAT) domain HCN55_10005 PF07690 Major Facilitator Superfamily HCN55_10010 PF00370 FGGY family of carbohydrate kinases, N-terminal domain HCN55_10010 PF02782 FGGY family of carbohydrate kinases, C-terminal domain HCN55_10015 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain HCN55_10015 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain HCN55_10020 PF01568 Molydopterin dinucleotide binding domain HCN55_10020 PF04879 Molybdopterin oxidoreductase Fe4S4 domain HCN55_10020 PF00384 Molybdopterin oxidoreductase HCN55_10030 PF17094 Uncharacterised protein family (UPF0715) HCN55_10045 PF13217 Protein of unknown function (DUF4025) HCN55_10050 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HCN55_10050 PF05227 CHASE3 domain HCN55_10050 PF00672 HAMP domain HCN55_10055 PF11794 4-hydroxyphenylacetate 3-hydroxylase N terminal HCN55_10055 PF03241 4-hydroxyphenylacetate 3-hydroxylase C terminal HCN55_10060 PF03330 Lytic transglycolase HCN55_10065 PF06912 Protein of unknown function (DUF1275) HCN55_10070 PF00544 Pectate lyase HCN55_10075 PF02586 SOS response associated peptidase (SRAP) HCN55_10085 PF00190 Cupin HCN55_10090 PF16302 Domain of unknown function (DUF4944) HCN55_10100 PF14268 YoaP-like HCN55_10100 PF00583 Acetyltransferase (GNAT) family HCN55_10120 PF04294 VanW like protein HCN55_10125 PF11188 Protein of unknown function (DUF2975) HCN55_10130 PF13443 Cro/C1-type HTH DNA-binding domain HCN55_10135 PF05675 Protein of unknown function (DUF817) HCN55_10140 PF03466 LysR substrate binding domain HCN55_10140 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HCN55_10145 PF00892 EamA-like transporter family HCN55_10155 PF01965 DJ-1/PfpI family HCN55_10170 PF11518 Protein of unknown function (DUF3221) HCN55_10185 PF00391 PEP-utilising enzyme, mobile domain HCN55_10185 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain HCN55_10190 PF00457 Glycosyl hydrolases family 11 HCN55_10195 PF05154 TM2 domain HCN55_10200 PF01381 Helix-turn-helix HCN55_10215 PF02586 SOS response associated peptidase (SRAP) HCN55_10250 PF18801 response regulator aspartate phosphatase H, N terminal HCN55_10265 PF08863 YolD-like protein HCN55_10275 PF07693 KAP family P-loop domain HCN55_10300 PF14411 A nuclease of the HNH/ENDO VII superfamily with conserved LHH HCN55_10300 PF04740 LXG domain of WXG superfamily HCN55_10305 PF09346 SMI1 / KNR4 family (SUKH-1) HCN55_10310 PF01593 Flavin containing amine oxidoreductase HCN55_10315 PF11962 Peptidase_G2, IMC autoproteolytic cleavage domain HCN55_10315 PF12708 Pectate lyase superfamily protein HCN55_10320 PF01588 Putative tRNA binding domain HCN55_10325 PF12833 Helix-turn-helix domain HCN55_10325 PF07883 Cupin domain HCN55_10330 PF00583 Acetyltransferase (GNAT) family HCN55_10335 PF13305 Tetracyclin repressor-like, C-terminal domain HCN55_10335 PF00440 Bacterial regulatory proteins, tetR family HCN55_10340 PF00753 Metallo-beta-lactamase superfamily HCN55_10345 PF06445 GyrI-like small molecule binding domain HCN55_10350 PF13280 WYL domain HCN55_10350 PF08279 HTH domain HCN55_10360 PF01022 Bacterial regulatory protein, arsR family HCN55_10370 PF04238 Protein of unknown function (DUF420) HCN55_10375 PF18846 Bacterial archaeo-eukaryotic release factor family 5 HCN55_10385 PF17676 LD-carboxypeptidase C-terminal domain HCN55_10385 PF02016 LD-carboxypeptidase N-terminal domain HCN55_10390 PF00487 Fatty acid desaturase HCN55_10395 PF07730 Histidine kinase HCN55_10400 PF00196 Bacterial regulatory proteins, luxR family HCN55_10400 PF00072 Response regulator receiver domain HCN55_10405 PF06725 3D domain HCN55_10405 PF01476 LysM domain HCN55_10410 PF00570 HRDC domain HCN55_10410 PF00270 DEAD/DEAH box helicase HCN55_10410 PF00271 Helicase conserved C-terminal domain HCN55_10410 PF16124 RecQ zinc-binding HCN55_10410 PF09382 RQC domain HCN55_10420 PF02525 Flavodoxin-like fold HCN55_10425 PF01258 Prokaryotic dksA/traR C4-type zinc finger HCN55_10440 PF00011 Hsp20/alpha crystallin family HCN55_10455 PF08000 Bacterial PH domain HCN55_10465 PF00171 Aldehyde dehydrogenase family HCN55_10470 PF13249 Squalene-hopene cyclase N-terminal domain HCN55_10470 PF13243 Squalene-hopene cyclase C-terminal domain HCN55_10475 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain HCN55_10475 PF02777 Iron/manganese superoxide dismutases, C-terminal domain HCN55_10480 PF00209 Sodium:neurotransmitter symporter family HCN55_10485 PF01758 Sodium Bile acid symporter family HCN55_10490 PF00364 Biotin-requiring enzyme HCN55_10490 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) HCN55_10490 PF02817 e3 binding domain HCN55_10495 PF16870 2-oxoglutarate dehydrogenase C-terminal HCN55_10495 PF02779 Transketolase, pyrimidine binding domain HCN55_10495 PF00676 Dehydrogenase E1 component HCN55_10500 PF00092 von Willebrand factor type A domain HCN55_10505 PF07728 AAA domain (dynein-related subfamily) HCN55_10510 PF00080 Copper/zinc superoxide dismutase (SODC) HCN55_10510 PF13627 Prokaryotic lipoprotein-attachment site HCN55_10515 PF00877 NlpC/P60 family HCN55_10515 PF01476 LysM domain HCN55_10520 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase HCN55_10525 PF02457 DisA bacterial checkpoint controller nucleotide-binding HCN55_10525 PF10372 Bacterial membrane-spanning protein N-terminus HCN55_10530 PF01554 MatE HCN55_10535 PF01740 STAS domain HCN55_10540 PF02585 GlcNAc-PI de-N-acetylase HCN55_10545 PF08830 Protein of unknown function (DUF1806) HCN55_10555 PF00892 EamA-like transporter family HCN55_10570 PF02447 GntP family permease HCN55_10575 PF14552 Tautomerase enzyme HCN55_10580 PF01638 HxlR-like helix-turn-helix HCN55_10585 PF00881 Nitroreductase family HCN55_10590 PF01738 Dienelactone hydrolase family HCN55_10595 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily HCN55_10600 PF11755 Protein of unknown function (DUF3311) HCN55_10605 PF00474 Sodium:solute symporter family HCN55_10610 PF03572 Peptidase family S41 HCN55_10610 PF01471 Putative peptidoglycan binding domain HCN55_10610 PF17820 PDZ domain HCN55_10615 PF08241 Methyltransferase domain HCN55_10625 PF02557 D-alanyl-D-alanine carboxypeptidase HCN55_10630 PF01048 Phosphorylase superfamily HCN55_10640 PF14191 YodL-like HCN55_10645 PF01569 PAP2 superfamily HCN55_10650 PF14162 YozD-like protein HCN55_10665 PF06855 YozE SAM-like fold HCN55_10670 PF14122 YokU-like protein, putative antitoxin HCN55_10675 PF12544 Lysine-2,3-aminomutase HCN55_10680 PF00583 Acetyltransferase (GNAT) family HCN55_10685 PF07687 Peptidase dimerisation domain HCN55_10685 PF01546 Peptidase family M20/M25/M40 HCN55_10690 PF01144 Coenzyme A transferase HCN55_10695 PF01144 Coenzyme A transferase HCN55_10700 PF00202 Aminotransferase class-III HCN55_10715 PF00583 Acetyltransferase (GNAT) family HCN55_10720 PF00535 Glycosyl transferase family 2 HCN55_10735 PF12996 DUF based on E. rectale Gene description (DUF3880) HCN55_10740 PF02333 Phytase HCN55_10745 PF08485 Polysaccharide biosynthesis protein C-terminal HCN55_10745 PF02719 Polysaccharide biosynthesis protein HCN55_10760 PF13443 Cro/C1-type HTH DNA-binding domain HCN55_10810 PF00149 Calcineurin-like phosphoesterase HCN55_10815 PF00269 Small, acid-soluble spore proteins, alpha/beta type HCN55_10845 PF06445 GyrI-like small molecule binding domain HCN55_10850 PF00692 dUTPase HCN55_10855 PF00085 Thioredoxin HCN55_10865 PF13392 HNH endonuclease HCN55_10875 PF02867 Ribonucleotide reductase, barrel domain HCN55_10875 PF00317 Ribonucleotide reductase, all-alpha domain HCN55_10875 PF08343 Ribonucleotide reductase N-terminal HCN55_10875 PF14528 LAGLIDADG-like domain HCN55_10880 PF14528 LAGLIDADG-like domain HCN55_10880 PF02867 Ribonucleotide reductase, barrel domain HCN55_10880 PF08343 Ribonucleotide reductase N-terminal HCN55_10880 PF00317 Ribonucleotide reductase, all-alpha domain HCN55_10885 PF07972 NrdI Flavodoxin like HCN55_10975 PF00145 C-5 cytosine-specific DNA methylase HCN55_10985 PF06941 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C) HCN55_10990 PF02223 Thymidylate kinase HCN55_11000 PF09629 YorP protein HCN55_11015 PF06725 3D domain HCN55_11020 PF07733 Bacterial DNA polymerase III alpha NTPase domain HCN55_11020 PF17657 Bacterial DNA polymerase III alpha subunit finger domain HCN55_11020 PF14579 Helix-hairpin-helix motif HCN55_11020 PF02811 PHP domain HCN55_11025 PF01368 DHH family HCN55_11025 PF17768 RecJ OB domain HCN55_11035 PF03796 DnaB-like helicase C terminal domain HCN55_11060 PF09636 XkdW protein HCN55_11075 PF13229 Right handed beta helix region HCN55_11080 PF05908 Poly-gamma-glutamate hydrolase HCN55_11095 PF02586 SOS response associated peptidase (SRAP) HCN55_11100 PF01068 ATP dependent DNA ligase domain HCN55_11130 PF14037 YoqO-like protein HCN55_11145 PF01844 HNH endonuclease HCN55_11155 PF06908 YspA SLOG family HCN55_11185 PF03374 Phage antirepressor protein KilAC domain HCN55_11185 PF09669 Phage regulatory protein Rha (Phage_pRha) HCN55_11215 PF09643 YopX protein HCN55_11235 PF09467 Hypothetical protein Yopt HCN55_11240 PF13443 Cro/C1-type HTH DNA-binding domain HCN55_11250 PF14072 DNA-sulfur modification-associated HCN55_11255 PF02899 Phage integrase, N-terminal SAM-like domain HCN55_11255 PF00589 Phage integrase family HCN55_11260 PF01381 Helix-turn-helix HCN55_11295 PF14163 Super-infection exclusion protein B HCN55_11325 PF17094 Uncharacterised protein family (UPF0715) HCN55_11330 PF08808 RES domain HCN55_11335 PF13443 Cro/C1-type HTH DNA-binding domain HCN55_11375 PF01381 Helix-turn-helix HCN55_11390 PF00216 Bacterial DNA-binding protein HCN55_11400 PF09642 YonK protein HCN55_11425 PF03237 Terminase-like family HCN55_11510 PF09693 Phage uncharacterised protein (Phage_XkdX) HCN55_11525 PF13495 Phage integrase, N-terminal SAM-like domain HCN55_11525 PF00589 Phage integrase family HCN55_11555 PF01551 Peptidase family M23 HCN55_11555 PF10145 Phage-related minor tail protein HCN55_11555 PF01464 Transglycosylase SLT domain HCN55_11560 PF05709 Phage tail protein HCN55_11565 PF06605 Prophage endopeptidase tail HCN55_11575 PF12708 Pectate lyase superfamily protein HCN55_11575 PF09992 Phosphodiester glycosidase HCN55_11590 PF01510 N-acetylmuramoyl-L-alanine amidase HCN55_11595 PF10960 BhlA holin family HCN55_11600 PF04688 SPP1 phage holin HCN55_11605 PF02600 Disulfide bond formation protein DsbB HCN55_11610 PF00535 Glycosyl transferase family 2 HCN55_11615 PF00085 Thioredoxin HCN55_11620 PF03412 Peptidase C39 family HCN55_11620 PF00005 ABC transporter HCN55_11620 PF00664 ABC transporter transmembrane region HCN55_11630 PF06713 Bacterial PH domain HCN55_11635 PF11798 IMS family HHH motif HCN55_11635 PF00817 impB/mucB/samB family HCN55_11635 PF11799 impB/mucB/samB family C-terminal domain HCN55_11640 PF08863 YolD-like protein HCN55_11655 PF16219 Domain of unknown function (DUF4879) HCN55_11665 PF13302 Acetyltransferase (GNAT) domain HCN55_11675 PF09346 SMI1 / KNR4 family (SUKH-1) HCN55_11680 PF15652 HNH/Endo VII superfamily toxin with a SHH signature HCN55_11680 PF04740 LXG domain of WXG superfamily HCN55_11685 PF09346 SMI1 / KNR4 family (SUKH-1) HCN55_11700 PF05901 Excalibur calcium-binding domain HCN55_11700 PF00565 Staphylococcal nuclease homologue HCN55_11705 PF14470 Bacterial PH domain HCN55_11710 PF02522 Aminoglycoside 3-N-acetyltransferase HCN55_11735 PF07508 Recombinase HCN55_11735 PF00239 Resolvase, N terminal domain HCN55_11740 PF02719 Polysaccharide biosynthesis protein HCN55_11745 PF01641 SelR domain HCN55_11750 PF01625 Peptide methionine sulfoxide reductase HCN55_11755 PF01047 MarR family HCN55_11760 PF01554 MatE HCN55_11765 PF17431 Uncharacterized YmpT-like HCN55_11770 PF09911 Uncharacterized protein conserved in bacteria (DUF2140) HCN55_11775 PF13472 GDSL-like Lipase/Acylhydrolase family HCN55_11780 PF02630 SCO1/SenC HCN55_11785 PF10751 Protein of unknown function (DUF2535) HCN55_11790 PF00291 Pyridoxal-phosphate dependent enzyme HCN55_11790 PF00585 C-terminal regulatory domain of Threonine dehydratase HCN55_11795 PF08461 Ribonuclease R winged-helix domain HCN55_11795 PF00158 Sigma-54 interaction domain HCN55_11800 PF03006 Haemolysin-III related HCN55_11810 PF00186 Dihydrofolate reductase HCN55_11815 PF00303 Thymidylate synthase HCN55_11820 PF04608 Phosphatidylglycerophosphatase A HCN55_11825 PF14005 YpjP-like protein HCN55_11830 PF04445 Putative SAM-dependent methyltransferase HCN55_11835 PF06491 Disulphide isomerase HCN55_11840 PF00920 Dehydratase family HCN55_11845 PF13769 Virulence factor HCN55_11845 PF08712 Scaffold protein Nfu/NifU N terminal HCN55_11850 PF01966 HD domain HCN55_11855 PF00255 Glutathione peroxidase HCN55_11860 PF04204 Homoserine O-succinyltransferase HCN55_11865 PF00534 Glycosyl transferases group 1 HCN55_11865 PF06925 Monogalactosyldiacylglycerol (MGDG) synthase HCN55_11875 PF00313 'Cold-shock' DNA-binding domain HCN55_11885 PF10819 Protein of unknown function (DUF2564) HCN55_11890 PF10782 Zinc-finger HCN55_11895 PF13456 Reverse transcriptase-like HCN55_11900 PF02592 Putative vitamin uptake transporter HCN55_11905 PF13456 Reverse transcriptase-like HCN55_11915 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain HCN55_11915 PF01367 5'-3' exonuclease, C-terminal SAM fold HCN55_11925 PF10752 Protein of unknown function (DUF2533) HCN55_11930 PF00350 Dynamin family HCN55_11940 PF04140 Isoprenylcysteine carboxyl methyltransferase (ICMT) family HCN55_11945 PF00195 Chalcone and stilbene synthases, N-terminal domain HCN55_11945 PF02797 Chalcone and stilbene synthases, C-terminal domain HCN55_11950 PF00860 Permease family HCN55_11955 PF00156 Phosphoribosyl transferase domain HCN55_11960 PF02074 Carboxypeptidase Taq (M32) metallopeptidase HCN55_11965 PF03812 2-keto-3-deoxygluconate permease HCN55_11970 PF01081 KDPG and KHG aldolase HCN55_11975 PF00294 pfkB family carbohydrate kinase HCN55_11980 PF00356 Bacterial regulatory proteins, lacI family HCN55_11985 PF04962 KduI/IolB family HCN55_11995 PF13307 Helicase C-terminal domain HCN55_12005 PF14139 YpzG-like protein HCN55_12010 PF02926 THUMP domain HCN55_12010 PF01170 Putative RNA methylase family UPF0020 HCN55_12020 PF05103 DivIVA protein HCN55_12025 PF06908 YspA SLOG family HCN55_12030 PF11122 Inner spore coat protein D HCN55_12040 PF13482 RNase_H superfamily HCN55_12045 PF00270 DEAD/DEAH box helicase HCN55_12045 PF09369 Domain of unknown function (DUF1998) HCN55_12045 PF00271 Helicase conserved C-terminal domain HCN55_12050 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 HCN55_12060 PF14179 YppG-like protein HCN55_12065 PF14178 YppF-like protein HCN55_12070 PF08807 Bacterial domain of unknown function (DUF1798) HCN55_12075 PF17522 Family of unknown function (DUF5446) HCN55_12085 PF10720 Protein of unknown function (DUF2515) HCN55_12090 PF03838 Recombination protein U HCN55_12095 PF00912 Transglycosylase HCN55_12095 PF00905 Penicillin binding protein transpeptidase domain HCN55_12105 PF00730 HhH-GPD superfamily base excision DNA repair protein HCN55_12105 PF00633 Helix-hairpin-helix motif HCN55_12105 PF10576 Iron-sulfur binding domain of endonuclease III HCN55_12110 PF07261 Replication initiation and membrane attachment HCN55_12115 PF00152 tRNA synthetases class II (D, K and N) HCN55_12115 PF01336 OB-fold nucleic acid binding domain HCN55_12120 PF00155 Aminotransferase class I and II HCN55_12125 PF17881 Domain of unknown function (DUF5590) HCN55_12125 PF03413 Peptidase propeptide and YPEB domain HCN55_12130 PF14084 Protein of unknown function (DUF4264) HCN55_12135 PF13307 Helicase C-terminal domain HCN55_12135 PF04851 Type III restriction enzyme, res subunit HCN55_12135 PF00929 Exonuclease HCN55_12140 PF02261 Aspartate decarboxylase HCN55_12145 PF02569 Pantoate-beta-alanine ligase HCN55_12150 PF02548 Ketopantoate hydroxymethyltransferase HCN55_12155 PF03099 Biotin/lipoate A/B protein ligase family HCN55_12155 PF08279 HTH domain HCN55_12155 PF02237 Biotin protein ligase C terminal domain HCN55_12160 PF13735 tRNA nucleotidyltransferase domain 2 putative HCN55_12160 PF01743 Poly A polymerase head domain HCN55_12160 PF12627 Probable RNA and SrmB- binding site of polymerase A HCN55_12165 PF13439 Glycosyltransferase Family 4 HCN55_12165 PF00534 Glycosyl transferases group 1 HCN55_12170 PF02585 GlcNAc-PI de-N-acetylase HCN55_12175 PF02142 MGS-like domain HCN55_12180 PF01113 Dihydrodipicolinate reductase, N-terminus HCN55_12180 PF05173 Dihydrodipicolinate reductase, C-terminus HCN55_12185 PF03819 MazG nucleotide pyrophosphohydrolase domain HCN55_12190 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 HCN55_12190 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) HCN55_12195 PF09577 Sporulation protein YpjB (SpoYpjB) HCN55_12200 PF07187 Protein of unknown function (DUF1405) HCN55_12205 PF13442 Cytochrome C oxidase, cbb3-type, subunit III HCN55_12205 PF00032 Cytochrome b(C-terminal)/b6/petD HCN55_12210 PF00033 Cytochrome b/b6/petB HCN55_12215 PF00355 Rieske [2Fe-2S] domain HCN55_12220 PF10673 Protein of unknown function (DUF2487) HCN55_12225 PF08858 IDEAL domain HCN55_12225 PF08864 UPF0302 domain HCN55_12235 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) HCN55_12240 PF02153 Prephenate dehydrogenase HCN55_12240 PF01842 ACT domain HCN55_12245 PF00155 Aminotransferase class I and II HCN55_12250 PF00290 Tryptophan synthase alpha chain HCN55_12255 PF00291 Pyridoxal-phosphate dependent enzyme HCN55_12260 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase HCN55_12265 PF00218 Indole-3-glycerol phosphate synthase HCN55_12270 PF00591 Glycosyl transferase family, a/b domain HCN55_12270 PF02885 Glycosyl transferase family, helical bundle domain HCN55_12275 PF04715 Anthranilate synthase component I, N terminal region HCN55_12275 PF00425 chorismate binding enzyme HCN55_12280 PF07736 Chorismate mutase type I HCN55_12285 PF01761 3-dehydroquinate synthase HCN55_12290 PF01264 Chorismate synthase HCN55_12295 PF01739 CheR methyltransferase, SAM binding domain HCN55_12295 PF03705 CheR methyltransferase, all-alpha domain HCN55_12300 PF00334 Nucleoside diphosphate kinase HCN55_12305 PF00348 Polyprenyl synthetase HCN55_12310 PF01209 ubiE/COQ5 methyltransferase family HCN55_12315 PF07307 Heptaprenyl diphosphate synthase (HEPPP synthase) subunit 1 HCN55_12320 PF02081 Tryptophan RNA-binding attenuator protein HCN55_12325 PF01227 GTP cyclohydrolase I HCN55_12330 PF00216 Bacterial DNA-binding protein HCN55_12335 PF09547 Stage IV sporulation protein A (spore_IV_A) HCN55_12345 PF10966 Protein of unknown function (DUF2768) HCN55_12350 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus HCN55_12350 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus HCN55_12355 PF01926 50S ribosome-binding GTPase HCN55_12355 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal HCN55_12365 PF14045 YIEGIA protein HCN55_12375 PF14140 YpzI-like protein HCN55_12380 PF01070 FMN-dependent dehydrogenase HCN55_12385 PF00575 S1 RNA binding domain HCN55_12390 PF02224 Cytidylate kinase HCN55_12395 PF17313 Family of unknown function (DUF5359) HCN55_12400 PF12945 Flagellar protein YcgR HCN55_12400 PF07238 PilZ domain HCN55_12405 PF14620 YpeB sporulation HCN55_12405 PF03413 Peptidase propeptide and YPEB domain HCN55_12410 PF01471 Putative peptidoglycan binding domain HCN55_12410 PF07486 Cell Wall Hydrolase HCN55_12415 PF13367 PrsW family intramembrane metalloprotease HCN55_12425 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain HCN55_12425 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase HCN55_12430 PF05389 Negative regulator of genetic competence (MecA) HCN55_12435 PF00149 Calcineurin-like phosphoesterase HCN55_12440 PF10864 Protein of unknown function (DUF2663) HCN55_12445 PF01476 LysM domain HCN55_12450 PF02517 CPBP intramembrane metalloprotease HCN55_12455 PF00271 Helicase conserved C-terminal domain HCN55_12455 PF00270 DEAD/DEAH box helicase HCN55_12460 PF14493 Helix-turn-helix domain HCN55_12470 PF12822 ECF transporter, substrate-specific component HCN55_12475 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain HCN55_12475 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain HCN55_12475 PF01842 ACT domain HCN55_12480 PF01487 Type I 3-dehydroquinase HCN55_12490 PF08281 Sigma-70, region 4 HCN55_12490 PF04542 Sigma-70 region 2 HCN55_12495 PF00512 His Kinase A (phospho-acceptor) domain HCN55_12495 PF18698 Histidine kinase sensor domain HCN55_12495 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HCN55_12495 PF00672 HAMP domain HCN55_12495 PF00989 PAS fold HCN55_12500 PF00486 Transcriptional regulatory protein, C terminal HCN55_12500 PF00072 Response regulator receiver domain HCN55_12505 PF01578 Cytochrome C assembly protein HCN55_12510 PF05140 ResB-like family HCN55_12515 PF00578 AhpC/TSA family HCN55_12520 PF01479 S4 domain HCN55_12520 PF00849 RNA pseudouridylate synthase HCN55_12525 PF07670 Nucleoside recognition HCN55_12530 PF07670 Nucleoside recognition HCN55_12535 PF00768 D-alanyl-D-alanine carboxypeptidase HCN55_12535 PF07943 Penicillin-binding protein 5, C-terminal domain HCN55_12540 PF13047 Protein of unknown function (DUF3907) HCN55_12545 PF04079 Segregation and condensation complex subunit ScpB HCN55_12550 PF02616 Segregation and condensation protein ScpA HCN55_12555 PF03745 Domain of unknown function (DUF309) HCN55_12560 PF00583 Acetyltransferase (GNAT) family HCN55_12565 PF00885 6,7-dimethyl-8-ribityllumazine synthase HCN55_12570 PF00925 GTP cyclohydrolase II HCN55_12570 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase HCN55_12575 PF00677 Lumazine binding domain HCN55_12580 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region HCN55_12580 PF01872 RibD C-terminal domain HCN55_12590 PF10502 Signal peptidase, peptidase S26 HCN55_12600 PF09855 Nucleic-acid-binding protein containing Zn-ribbon domain (DUF2082) HCN55_12610 PF10676 Spore germination protein gerPA/gerPF HCN55_12615 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD HCN55_12620 PF06207 Protein of unknown function (DUF1002) HCN55_12625 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain HCN55_12625 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain HCN55_12630 PF03323 Bacillus/Clostridium GerA spore germination protein HCN55_12635 PF14097 Stage V sporulation protein AE1 HCN55_12640 PF03862 SpoVAC/SpoVAEB sporulation membrane protein HCN55_12645 PF07451 Stage V sporulation protein AD (SpoVAD) HCN55_12650 PF03862 SpoVAC/SpoVAEB sporulation membrane protein HCN55_12655 PF13782 Stage V sporulation protein AB HCN55_12660 PF12164 Stage V sporulation protein AA HCN55_12665 PF04545 Sigma-70, region 4 HCN55_12665 PF04542 Sigma-70 region 2 HCN55_12665 PF04539 Sigma-70 region 3 HCN55_12670 PF13581 Histidine kinase-like ATPase domain HCN55_12675 PF01740 STAS domain HCN55_12680 PF00768 D-alanyl-D-alanine carboxypeptidase HCN55_12680 PF07943 Penicillin-binding protein 5, C-terminal domain HCN55_12685 PF01048 Phosphorylase superfamily HCN55_12690 PF01676 Metalloenzyme superfamily HCN55_12695 PF00589 Phage integrase family HCN55_12695 PF02899 Phage integrase, N-terminal SAM-like domain HCN55_12700 PF14004 Protein of unknown function (DUF4227) HCN55_12705 PF01475 Ferric uptake regulator family HCN55_12710 PF01944 Stage II sporulation protein M HCN55_12720 PF03949 Malic enzyme, NAD binding domain HCN55_12720 PF00390 Malic enzyme, N-terminal domain HCN55_12720 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain HCN55_12725 PF03553 Na+/H+ antiporter family HCN55_12730 PF10415 Fumarase C C-terminus HCN55_12730 PF00206 Lyase HCN55_12735 PF17763 Glutaminase/Asparaginase C-terminal domain HCN55_12735 PF00710 Asparaginase, N-terminal HCN55_12740 PF01381 Helix-turn-helix HCN55_12750 PF00293 NUDIX domain HCN55_12755 PF13072 Mother cell inhibitor of FtsZ HCN55_12760 PF00248 Aldo/keto reductase family HCN55_12765 PF13025 Protein of unknown function (DUF3886) HCN55_12770 PF12146 Serine aminopeptidase, S33 HCN55_12775 PF10827 Protein of unknown function (DUF2552) HCN55_12780 PF01521 Iron-sulphur cluster biosynthesis HCN55_12785 PF13673 Acetyltransferase (GNAT) domain HCN55_12785 PF04229 GrpB protein HCN55_12790 PF03992 Antibiotic biosynthesis monooxygenase HCN55_12795 PF00583 Acetyltransferase (GNAT) family HCN55_12800 PF08863 YolD-like protein HCN55_12805 PF00817 impB/mucB/samB family HCN55_12805 PF11799 impB/mucB/samB family C-terminal domain HCN55_12810 PF14164 YqzH-like protein HCN55_12815 PF07690 Major Facilitator Superfamily HCN55_12830 PF00485 Phosphoribulokinase / Uridine kinase family HCN55_12835 PF00291 Pyridoxal-phosphate dependent enzyme HCN55_12840 PF00106 short chain dehydrogenase HCN55_12845 PF00753 Metallo-beta-lactamase superfamily HCN55_12850 PF14748 Pyrroline-5-carboxylate reductase dimerisation HCN55_12850 PF03807 NADP oxidoreductase coenzyme F420-dependent HCN55_12855 PF01546 Peptidase family M20/M25/M40 HCN55_12860 PF00724 NADH:flavin oxidoreductase / NADH oxidase family HCN55_12865 PF12146 Serine aminopeptidase, S33 HCN55_12875 PF12706 Beta-lactamase superfamily domain HCN55_12880 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain HCN55_12880 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain HCN55_12885 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase HCN55_12885 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain HCN55_12890 PF00817 impB/mucB/samB family HCN55_12890 PF11799 impB/mucB/samB family C-terminal domain HCN55_12890 PF11798 IMS family HHH motif HCN55_12900 PF02096 60Kd inner membrane protein HCN55_12905 PF09844 Uncharacterized conserved protein (COG2071) HCN55_12910 PF01546 Peptidase family M20/M25/M40 HCN55_12910 PF07687 Peptidase dimerisation domain HCN55_12915 PF01039 Carboxyl transferase domain HCN55_12930 PF03734 L,D-transpeptidase catalytic domain HCN55_12935 PF11728 Putative aromatic acid exporter C-terminal domain HCN55_12935 PF06081 Aromatic acid exporter family member 1 HCN55_12940 PF00005 ABC transporter HCN55_12945 PF00528 Binding-protein-dependent transport system inner membrane component HCN55_12950 PF00497 Bacterial extracellular solute-binding proteins, family 3 HCN55_12955 PF06491 Disulphide isomerase HCN55_12960 PF00781 Diacylglycerol kinase catalytic domain HCN55_12965 PF07690 Major Facilitator Superfamily HCN55_12970 PF06445 GyrI-like small molecule binding domain HCN55_12970 PF13411 MerR HTH family regulatory protein HCN55_12975 PF02817 e3 binding domain HCN55_12975 PF00364 Biotin-requiring enzyme HCN55_12975 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) HCN55_12980 PF02779 Transketolase, pyrimidine binding domain HCN55_12980 PF02780 Transketolase, C-terminal domain HCN55_12985 PF00676 Dehydrogenase E1 component HCN55_12990 PF07992 Pyridine nucleotide-disulphide oxidoreductase HCN55_12990 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain HCN55_12995 PF00871 Acetokinase family HCN55_13000 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain HCN55_13000 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase HCN55_13005 PF01515 Phosphate acetyl/butaryl transferase HCN55_13010 PF00158 Sigma-54 interaction domain HCN55_13010 PF00989 PAS fold HCN55_13010 PF02954 Bacterial regulatory protein, Fis family HCN55_13015 PF11118 Protein of unknown function (DUF2627) HCN55_13025 PF03972 MmgE/PrpD family HCN55_13030 PF00285 Citrate synthase, C-terminal domain HCN55_13035 PF02771 Acyl-CoA dehydrogenase, N-terminal domain HCN55_13035 PF02770 Acyl-CoA dehydrogenase, middle domain HCN55_13035 PF00441 Acyl-CoA dehydrogenase, C-terminal domain HCN55_13040 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain HCN55_13040 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain HCN55_13045 PF00108 Thiolase, N-terminal domain HCN55_13045 PF02803 Thiolase, C-terminal domain HCN55_13050 PF03009 Glycerophosphoryl diester phosphodiesterase family HCN55_13055 PF01520 N-acetylmuramoyl-L-alanine amidase HCN55_13070 PF00724 NADH:flavin oxidoreductase / NADH oxidase family HCN55_13075 PF00072 Response regulator receiver domain HCN55_13075 PF08769 Sporulation initiation factor Spo0A C terminal HCN55_13080 PF05580 SpoIVB peptidase S55 HCN55_13080 PF17820 PDZ domain HCN55_13085 PF13476 AAA domain HCN55_13090 PF01316 Arginine repressor, DNA binding domain HCN55_13090 PF02863 Arginine repressor, C-terminal domain HCN55_13095 PF01479 S4 domain HCN55_13095 PF01728 FtsJ-like methyltransferase HCN55_13100 PF02780 Transketolase, C-terminal domain HCN55_13100 PF13292 1-deoxy-D-xylulose-5-phosphate synthase HCN55_13100 PF02779 Transketolase, pyrimidine binding domain HCN55_13105 PF00348 Polyprenyl synthetase HCN55_13110 PF02609 Exonuclease VII small subunit HCN55_13115 PF13742 OB-fold nucleic acid binding domain HCN55_13115 PF02601 Exonuclease VII, large subunit HCN55_13120 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain HCN55_13120 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain HCN55_13125 PF01029 NusB family HCN55_13130 PF03780 Asp23 family, cell envelope-related function HCN55_13135 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain HCN55_13135 PF00289 Biotin carboxylase, N-terminal domain HCN55_13135 PF02785 Biotin carboxylase C-terminal domain HCN55_13140 PF00364 Biotin-requiring enzyme HCN55_13145 PF12685 SpoIIIAH-like protein HCN55_13155 PF09581 Stage III sporulation protein AF (Spore_III_AF) HCN55_13160 PF09546 Stage III sporulation protein AE (spore_III_AE) HCN55_13165 PF06686 Stage III sporulation protein AC/AD protein family HCN55_13170 PF06686 Stage III sporulation protein AC/AD protein family HCN55_13175 PF09548 Stage III sporulation protein AB (spore_III_AB) HCN55_13185 PF10942 Protein of unknown function (DUF2619) HCN55_13190 PF01132 Elongation factor P (EF-P) OB domain HCN55_13190 PF08207 Elongation factor P (EF-P) KOW-like domain HCN55_13190 PF09285 Elongation factor P, C-terminal HCN55_13195 PF01321 Creatinase/Prolidase N-terminal domain HCN55_13195 PF00557 Metallopeptidase family M24 HCN55_13200 PF01220 Dehydroquinase class II HCN55_13205 PF11085 Conserved membrane protein YqhR HCN55_13210 PF07136 Protein of unknown function (DUF1385) HCN55_13220 PF01734 Patatin-like phospholipase HCN55_13225 PF01325 Iron dependent repressor, N-terminal DNA binding domain HCN55_13225 PF02742 Iron dependent repressor, metal binding and dimerisation domain HCN55_13230 PF03099 Biotin/lipoate A/B protein ligase family HCN55_13235 PF00581 Rhodanese-like domain HCN55_13240 PF02347 Glycine cleavage system P-protein HCN55_13245 PF02347 Glycine cleavage system P-protein HCN55_13250 PF08669 Glycine cleavage T-protein C-terminal barrel domain HCN55_13250 PF01571 Aminomethyltransferase folate-binding domain HCN55_13255 PF00176 SNF2 family N-terminal domain HCN55_13255 PF00271 Helicase conserved C-terminal domain HCN55_13260 PF11079 Bacterial protein YqhG of unknown function HCN55_13265 PF08671 Anti-repressor SinI HCN55_13270 PF01381 Helix-turn-helix HCN55_13270 PF08671 Anti-repressor SinI HCN55_13275 PF12389 Camelysin metallo-endopeptidase HCN55_13290 PF13028 Protein of unknown function (DUF3889) HCN55_13295 PF14038 YqzE-like protein HCN55_13300 PF14173 ComG operon protein 7 HCN55_13305 PF15980 Putative Competence protein ComGF HCN55_13315 PF07963 Prokaryotic N-terminal methylation motif HCN55_13320 PF07963 Prokaryotic N-terminal methylation motif HCN55_13325 PF00482 Type II secretion system (T2SS), protein F HCN55_13330 PF00437 Type II/IV secretion system protein HCN55_13335 PF01544 CorA-like Mg2+ transporter protein HCN55_13340 PF01595 Cyclin M transmembrane N-terminal domain HCN55_13340 PF03471 Transporter associated domain HCN55_13340 PF00571 CBS domain HCN55_13345 PF01740 STAS domain HCN55_13345 PF14361 RsbT co-antagonist protein rsbRD N-terminal domain HCN55_13355 PF03960 ArsC family HCN55_13360 PF11117 Protein of unknown function (DUF2626) HCN55_13365 PF00753 Metallo-beta-lactamase superfamily HCN55_13370 PF10958 Protein of unknown function (DUF2759) HCN55_13375 PF01910 Thiamine-binding protein HCN55_13385 PF00246 Zinc carboxypeptidase HCN55_13390 PF00884 Sulfatase HCN55_13395 PF00480 ROK family HCN55_13400 PF06014 Bacterial protein of unknown function (DUF910) HCN55_13405 PF01694 Rhomboid family HCN55_13415 PF01812 5-formyltetrahydrofolate cyclo-ligase family HCN55_13420 PF00471 Ribosomal protein L33 HCN55_13425 PF00534 Glycosyl transferases group 1 HCN55_13425 PF13439 Glycosyltransferase Family 4 HCN55_13445 PF00005 ABC transporter HCN55_13450 PF00005 ABC transporter HCN55_13455 PF00528 Binding-protein-dependent transport system inner membrane component HCN55_13460 PF00528 Binding-protein-dependent transport system inner membrane component HCN55_13465 PF12849 PBP superfamily domain HCN55_13475 PF07690 Major Facilitator Superfamily HCN55_13480 PF02777 Iron/manganese superoxide dismutases, C-terminal domain HCN55_13480 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain HCN55_13485 PF04306 Protein of unknown function (DUF456) HCN55_13490 PF06691 Protein of unknown function (DUF1189) HCN55_13505 PF04551 GcpE protein HCN55_13520 PF01475 Ferric uptake regulator family HCN55_13525 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) HCN55_13525 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 HCN55_13530 PF11116 Protein of unknown function (DUF2624) HCN55_13535 PF01261 Xylose isomerase-like TIM barrel HCN55_13540 PF00270 DEAD/DEAH box helicase HCN55_13540 PF00271 Helicase conserved C-terminal domain HCN55_13545 PF14181 YqfQ-like protein HCN55_13550 PF02401 LytB protein HCN55_13555 PF01784 NIF3 (NGG1p interacting factor 3) HCN55_13560 PF04816 tRNA (adenine(22)-N(1))-methyltransferase HCN55_13565 PF13442 Cytochrome C oxidase, cbb3-type, subunit III HCN55_13570 PF03979 Sigma-70 factor, region 1.1 HCN55_13570 PF00140 Sigma-70 factor, region 1.2 HCN55_13570 PF04545 Sigma-70, region 4 HCN55_13570 PF04542 Sigma-70 region 2 HCN55_13570 PF04539 Sigma-70 region 3 HCN55_13575 PF01807 CHC2 zinc finger HCN55_13575 PF08275 DNA primase catalytic core, N-terminal domain HCN55_13575 PF10410 DnaB-helicase binding domain of primase HCN55_13580 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 HCN55_13585 PF03618 Kinase/pyrophosphorylase HCN55_13590 PF00571 CBS domain HCN55_13590 PF08279 HTH domain HCN55_13595 PF02092 Glycyl-tRNA synthetase beta subunit HCN55_13600 PF02091 Glycyl-tRNA synthetase alpha subunit HCN55_13605 PF11967 Recombination protein O N terminal HCN55_13605 PF02565 Recombination protein O C terminal HCN55_13610 PF14006 YqzL-like protein HCN55_13615 PF01926 50S ribosome-binding GTPase HCN55_13615 PF07650 KH domain HCN55_13620 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region HCN55_13625 PF01219 Prokaryotic diacylglycerol kinase HCN55_13630 PF02130 Uncharacterized protein family UPF0054 HCN55_13635 PF07697 7TM-HD extracellular HCN55_13635 PF01966 HD domain HCN55_13635 PF07698 7TM receptor with intracellular HD hydrolase HCN55_13640 PF02562 PhoH-like protein HCN55_13645 PF06898 Putative stage IV sporulation protein YqfD HCN55_13650 PF07873 YabP family HCN55_13660 PF12127 SigmaW regulon antibacterial HCN55_13665 PF01972 Serine dehydrogenase proteinase HCN55_13665 PF01957 NfeD-like C-terminal, partner-binding HCN55_13670 PF09424 Yqey-like protein HCN55_13675 PF01165 Ribosomal protein S21 HCN55_13680 PF02690 Na+/Pi-cotransporter HCN55_13685 PF00919 Uncharacterized protein family UPF0004 HCN55_13685 PF04055 Radical SAM superfamily HCN55_13685 PF01938 TRAM domain HCN55_13690 PF04452 RNA methyltransferase HCN55_13700 PF00684 DnaJ central domain HCN55_13700 PF00226 DnaJ domain HCN55_13700 PF01556 DnaJ C terminal domain HCN55_13705 PF00012 Hsp70 protein HCN55_13710 PF01025 GrpE HCN55_13715 PF01628 HrcA protein C terminal domain HCN55_13720 PF04055 Radical SAM superfamily HCN55_13720 PF06969 HemN C-terminal domain HCN55_13725 PF00009 Elongation factor Tu GTP binding domain HCN55_13725 PF00679 Elongation factor G C-terminus HCN55_13725 PF03144 Elongation factor Tu domain 2 HCN55_13725 PF06421 GTP-binding protein LepA C-terminus HCN55_13730 PF12438 Protein of unknown function (DUF3679) HCN55_13735 PF07454 Stage II sporulation protein P (SpoIIP) HCN55_13740 PF03418 Germination protease HCN55_13745 PF01649 Ribosomal protein S20 HCN55_13750 PF06144 DNA polymerase III, delta subunit HCN55_13760 PF14141 YqzM-like protein HCN55_13765 PF13567 Domain of unknown function (DUF4131) HCN55_13765 PF00753 Metallo-beta-lactamase superfamily HCN55_13765 PF03772 Competence protein HCN55_13770 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region HCN55_13775 PF10531 SLBB domain HCN55_13780 PF14748 Pyrroline-5-carboxylate reductase dimerisation HCN55_13780 PF03807 NADP oxidoreductase coenzyme F420-dependent HCN55_13785 PF13649 Methyltransferase domain HCN55_13795 PF01966 HD domain HCN55_13800 PF01467 Cytidylyltransferase-like HCN55_13805 PF01985 CRS1 / YhbY (CRM) domain HCN55_13810 PF01488 Shikimate / quinate 5-dehydrogenase HCN55_13810 PF18317 Shikimate 5'-dehydrogenase C-terminal domain HCN55_13810 PF08501 Shikimate dehydrogenase substrate binding domain HCN55_13815 PF01926 50S ribosome-binding GTPase HCN55_13825 PF08970 Sporulation inhibitor A HCN55_13830 PF00657 GDSL-like Lipase/Acylhydrolase HCN55_13835 PF01471 Putative peptidoglycan binding domain HCN55_13835 PF01510 N-acetylmuramoyl-L-alanine amidase HCN55_13840 PF09335 SNARE associated Golgi protein HCN55_13845 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain HCN55_13845 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase HCN55_13855 PF14040 Deoxyribonuclease NucA/NucB HCN55_13865 PF07508 Recombinase HCN55_13865 PF00239 Resolvase, N terminal domain HCN55_13865 PF13408 Recombinase zinc beta ribbon domain HCN55_13870 PF01451 Low molecular weight phosphotyrosine protein phosphatase HCN55_13875 PF01758 Sodium Bile acid symporter family HCN55_13880 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily HCN55_13885 PF01022 Bacterial regulatory protein, arsR family HCN55_13890 PF08892 YqcI/YcgG family HCN55_13895 PF18801 response regulator aspartate phosphatase H, N terminal HCN55_13895 PF13181 Tetratricopeptide repeat HCN55_13910 PF14410 HNH/ENDO VII superfamily nuclease with conserved GHE residues HCN55_13910 PF14449 Pre-toxin TG HCN55_13910 PF04740 LXG domain of WXG superfamily HCN55_13915 PF05076 Suppressor of fused protein (SUFU) HCN55_13935 PF01471 Putative peptidoglycan binding domain HCN55_13935 PF01510 N-acetylmuramoyl-L-alanine amidase HCN55_13940 PF05105 Bacteriophage holin family HCN55_13950 PF09693 Phage uncharacterised protein (Phage_XkdX) HCN55_13955 PF09636 XkdW protein HCN55_13970 PF10076 Uncharacterised protein conserved in bacteria (DUF2313) HCN55_13975 PF04865 Baseplate J-like protein HCN55_13980 PF10934 Protein of unknown function (DUF2634) HCN55_13985 PF10844 Protein of unknown function (DUF2577) HCN55_13995 PF01476 LysM domain HCN55_14000 PF01464 Transglycosylase SLT domain HCN55_14010 PF08890 Phage XkdN-like tail assembly chaperone protein, TAC HCN55_14025 PF09393 Phage tail tube protein HCN55_14030 PF04984 Phage tail sheath protein subtilisin-like domain HCN55_14030 PF17481 Phage tail sheath protein beta-sandwich domain HCN55_14030 PF17482 Phage tail sheath C-terminal domain HCN55_14045 PF04883 Bacteriophage HK97-gp10, putative tail-component HCN55_14050 PF12206 Domain of unknown function (DUF3599) HCN55_14055 PF11436 Protein of unknown function (DUF3199) HCN55_14060 PF14553 YqbF, hypothetical protein domain HCN55_14065 PF05065 Phage capsid family HCN55_14070 PF14550 Putative phage serine protease XkdF HCN55_14080 PF04233 Phage Mu protein F like protein HCN55_14085 PF04860 Phage portal protein HCN55_14090 PF17288 Terminase RNAseH like domain HCN55_14090 PF04466 Phage terminase large subunit HCN55_14095 PF10668 Phage terminase small subunit HCN55_14115 PF17356 Phage-like element PBSX protein XtrA HCN55_14120 PF05866 Endodeoxyribonuclease RusA HCN55_14130 PF01695 IstB-like ATP binding protein HCN55_14135 PF07261 Replication initiation and membrane attachment HCN55_14140 PF03837 RecT family HCN55_14145 PF09588 YqaJ-like viral recombinase domain HCN55_14150 PF09466 Hypothetical protein Yqai HCN55_14160 PF17448 Uncharacterized YqaH-like HCN55_14165 PF01381 Helix-turn-helix HCN55_14175 PF01381 Helix-turn-helix HCN55_14180 PF01381 Helix-turn-helix HCN55_14195 PF06114 IrrE N-terminal-like domain HCN55_14220 PF06146 Phosphate-starvation-inducible E HCN55_14225 PF00512 His Kinase A (phospho-acceptor) domain HCN55_14230 PF00486 Transcriptional regulatory protein, C terminal HCN55_14230 PF00072 Response regulator receiver domain HCN55_14235 PF04235 Protein of unknown function (DUF418) HCN55_14245 PF00583 Acetyltransferase (GNAT) family HCN55_14250 PF02525 Flavodoxin-like fold HCN55_14255 PF13787 Protein of unknown function with HXXEE motif HCN55_14260 PF01925 Sulfite exporter TauE/SafE HCN55_14265 PF01206 Sulfurtransferase TusA HCN55_14270 PF00581 Rhodanese-like domain HCN55_14270 PF00753 Metallo-beta-lactamase superfamily HCN55_14280 PF00581 Rhodanese-like domain HCN55_14280 PF01206 Sulfurtransferase TusA HCN55_14290 PF13686 DsrE/DsrF/DrsH-like family HCN55_14295 PF02583 Metal-sensitive transcriptional repressor HCN55_14300 PF07883 Cupin domain HCN55_14310 PF13411 MerR HTH family regulatory protein HCN55_14310 PF06445 GyrI-like small molecule binding domain HCN55_14315 PF07690 Major Facilitator Superfamily HCN55_14320 PF00583 Acetyltransferase (GNAT) family HCN55_14325 PF00571 CBS domain HCN55_14325 PF03471 Transporter associated domain HCN55_14325 PF01595 Cyclin M transmembrane N-terminal domain HCN55_14330 PF14142 YrzO-like protein HCN55_14335 PF00892 EamA-like transporter family HCN55_14340 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HCN55_14340 PF03466 LysR substrate binding domain HCN55_14350 PF16916 Dimerisation domain of Zinc Transporter HCN55_14350 PF01545 Cation efflux family HCN55_14355 PF14552 Tautomerase enzyme HCN55_14360 PF03466 LysR substrate binding domain HCN55_14360 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HCN55_14370 PF05525 Branched-chain amino acid transport protein HCN55_14375 PF05437 Branched-chain amino acid transport protein (AzlD) HCN55_14380 PF03591 AzlC protein HCN55_14385 PF01037 Lrp/AsnC ligand binding domain HCN55_14390 PF01337 Barstar (barnase inhibitor) HCN55_14395 PF00067 Cytochrome P450 HCN55_14405 PF00857 Isochorismatase family HCN55_14410 PF10823 Protein of unknown function (DUF2568) HCN55_14420 PF05163 DinB family HCN55_14425 PF04439 Streptomycin adenylyltransferase HCN55_14430 PF03060 Nitronate monooxygenase HCN55_14435 PF01177 Asp/Glu/Hydantoin racemase HCN55_14440 PF15493 Domain of unknown function, YrpD HCN55_14445 PF09680 Family of unknown function HCN55_14455 PF09223 ZinT (YodA) periplasmic lipocalin-like zinc-recruitment HCN55_14460 PF08281 Sigma-70, region 4 HCN55_14460 PF04542 Sigma-70 region 2 HCN55_14465 PF00248 Aldo/keto reductase family HCN55_14470 PF03600 Citrate transporter HCN55_14475 PF03466 LysR substrate binding domain HCN55_14475 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HCN55_14480 PF04303 PrpF protein HCN55_14485 PF01374 Glycosyl hydrolase family 46 HCN55_14495 PF00561 alpha/beta hydrolase fold HCN55_14515 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily HCN55_14525 PF07875 Coat F domain HCN55_14530 PF00107 Zinc-binding dehydrogenase HCN55_14530 PF13823 Alcohol dehydrogenase GroES-associated HCN55_14530 PF08240 Alcohol dehydrogenase GroES-like domain HCN55_14540 PF07875 Coat F domain HCN55_14545 PF13411 MerR HTH family regulatory protein HCN55_14555 PF08240 Alcohol dehydrogenase GroES-like domain HCN55_14555 PF00107 Zinc-binding dehydrogenase HCN55_14560 PF01965 DJ-1/PfpI family HCN55_14565 PF08244 Glycosyl hydrolases family 32 C terminal HCN55_14565 PF00251 Glycosyl hydrolases family 32 N-terminal domain HCN55_14570 PF03613 PTS system mannose/fructose/sorbose family IID component HCN55_14575 PF03609 PTS system sorbose-specific iic component HCN55_14580 PF03830 PTS system sorbose subfamily IIB component HCN55_14585 PF03610 PTS system fructose IIA component HCN55_14590 PF00874 PRD domain HCN55_14590 PF03610 PTS system fructose IIA component HCN55_14590 PF00158 Sigma-54 interaction domain HCN55_14600 PF00324 Amino acid permease HCN55_14605 PF01810 LysE type translocator HCN55_14610 PF11495 Archaeal transcriptional regulator TrmB HCN55_14610 PF01978 Sugar-specific transcriptional regulator TrmB HCN55_14615 PF04542 Sigma-70 region 2 HCN55_14615 PF08281 Sigma-70, region 4 HCN55_14620 PF13739 Deacetylase PdaC HCN55_14620 PF11738 Protein of unknown function (DUF3298) HCN55_14625 PF01757 Acyltransferase family HCN55_14630 PF14145 YrhK-like protein HCN55_14635 PF00067 Cytochrome P450 HCN55_14635 PF00175 Oxidoreductase NAD-binding domain HCN55_14635 PF00258 Flavodoxin HCN55_14635 PF00667 FAD binding domain HCN55_14640 PF16295 Tetracyclin repressor-like, C-terminal domain HCN55_14640 PF00440 Bacterial regulatory proteins, tetR family HCN55_14645 PF08241 Methyltransferase domain HCN55_14655 PF09501 Probable sporulation protein (Bac_small_yrzI) HCN55_14660 PF01226 Formate/nitrite transporter HCN55_14665 PF10057 Uncharacterized conserved protein (DUF2294) HCN55_14670 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region HCN55_14670 PF00384 Molybdopterin oxidoreductase HCN55_14670 PF01568 Molydopterin dinucleotide binding domain HCN55_14670 PF04879 Molybdopterin oxidoreductase Fe4S4 domain HCN55_14670 PF00037 4Fe-4S binding domain HCN55_14675 PF07849 Protein of unknown function (DUF1641) HCN55_14680 PF14143 YrhC-like protein HCN55_14685 PF01053 Cys/Met metabolism PLP-dependent enzyme HCN55_14690 PF00291 Pyridoxal-phosphate dependent enzyme HCN55_14695 PF01048 Phosphorylase superfamily HCN55_14700 PF13649 Methyltransferase domain HCN55_14705 PF10750 Protein of unknown function (DUF2536) HCN55_14710 PF07423 Domain of unknown function (DUF1510) HCN55_14715 PF03717 Penicillin-binding Protein dimerisation domain HCN55_14715 PF00905 Penicillin binding protein transpeptidase domain HCN55_14720 PF01272 Transcription elongation factor, GreA/GreB, C-term HCN55_14720 PF03449 Transcription elongation factor, N-terminal HCN55_14725 PF00485 Phosphoribulokinase / Uridine kinase family HCN55_14740 PF01596 O-methyltransferase HCN55_14745 PF02618 YceG-like family HCN55_14750 PF06949 Protein of unknown function (DUF1292) HCN55_14755 PF03652 Holliday junction resolvase HCN55_14760 PF06135 IreB regulatory phosphoprotein HCN55_14765 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain HCN55_14765 PF02272 DHHA1 domain HCN55_14765 PF01411 tRNA synthetases class II (A) HCN55_14770 PF01594 AI-2E family transporter HCN55_14775 PF00005 ABC transporter HCN55_14780 PF00497 Bacterial extracellular solute-binding proteins, family 3 HCN55_14785 PF00528 Binding-protein-dependent transport system inner membrane component HCN55_14790 PF00528 Binding-protein-dependent transport system inner membrane component HCN55_14795 PF13056 Protein of unknown function (DUF3918) HCN55_14805 PF05239 PRC-barrel domain HCN55_14810 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain HCN55_14810 PF13538 UvrD-like helicase C-terminal domain HCN55_14810 PF14490 Helix-hairpin-helix containing domain HCN55_14815 PF13181 Tetratricopeptide repeat HCN55_14815 PF07719 Tetratricopeptide repeat HCN55_14825 PF00266 Aminotransferase class-V HCN55_14830 PF02082 Transcriptional regulator HCN55_14835 PF12002 MgsA AAA+ ATPase C terminal HCN55_14835 PF05496 Holliday junction DNA helicase RuvB P-loop domain HCN55_14835 PF16193 AAA C-terminal domain HCN55_14840 PF00899 ThiF family HCN55_14850 PF02938 GAD domain HCN55_14850 PF01336 OB-fold nucleic acid binding domain HCN55_14850 PF00152 tRNA synthetases class II (D, K and N) HCN55_14855 PF03129 Anticodon binding domain HCN55_14855 PF13393 Histidyl-tRNA synthetase HCN55_14860 PF17449 Uncharacterized YrzK-like HCN55_14865 PF01520 N-acetylmuramoyl-L-alanine amidase HCN55_14865 PF08239 Bacterial SH3 domain HCN55_14870 PF02580 D-Tyr-tRNA(Tyr) deacylase HCN55_14875 PF04607 Region found in RelA / SpoT proteins HCN55_14875 PF13291 ACT domain HCN55_14875 PF02824 TGS domain HCN55_14880 PF00156 Phosphoribosyl transferase domain HCN55_14885 PF01368 DHH family HCN55_14885 PF02272 DHHA1 domain HCN55_14885 PF10141 Single-strand DNA-specific exonuclease, C terminal domain HCN55_14885 PF17768 RecJ OB domain HCN55_14890 PF06305 Lipopolysaccharide assembly protein A domain HCN55_14895 PF02080 TrkA-C domain HCN55_14900 PF07549 SecD/SecF GG Motif HCN55_14900 PF02355 Protein export membrane protein HCN55_14905 PF13797 Post-transcriptional regulator HCN55_14910 PF01943 Polysaccharide biosynthesis protein HCN55_14910 PF14667 Polysaccharide biosynthesis C-terminal domain HCN55_14915 PF04239 Protein of unknown function (DUF421) HCN55_14920 PF12670 Protein of unknown function (DUF3792) HCN55_14925 PF02699 Preprotein translocase subunit HCN55_14930 PF01702 Queuine tRNA-ribosyltransferase HCN55_14935 PF02547 Queuosine biosynthesis protein HCN55_14940 PF11146 Protein of unknown function (DUF2905) HCN55_14945 PF05491 RuvB C-terminal winged helix domain HCN55_14945 PF05496 Holliday junction DNA helicase RuvB P-loop domain HCN55_14945 PF17864 RuvB AAA lid domain HCN55_14950 PF07499 RuvA, C-terminal domain HCN55_14950 PF01330 RuvA N terminal domain HCN55_14955 PF08955 BofC C-terminal domain HCN55_14955 PF08977 Bypass of Forespore C, N terminal HCN55_14960 PF07690 Major Facilitator Superfamily HCN55_14965 PF02894 Oxidoreductase family, C-terminal alpha/beta domain HCN55_14965 PF01408 Oxidoreductase family, NAD-binding Rossmann fold HCN55_14990 PF01235 Sodium:alanine symporter family HCN55_14995 PF01709 Transcriptional regulator HCN55_15000 PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) HCN55_15005 PF01476 LysM domain HCN55_15010 PF02445 Quinolinate synthetase A protein HCN55_15015 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain HCN55_15015 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain HCN55_15020 PF02910 Fumarate reductase flavoprotein C-term HCN55_15020 PF00890 FAD binding domain HCN55_15025 PF00266 Aminotransferase class-V HCN55_15030 PF02829 3H domain HCN55_15030 PF08279 HTH domain HCN55_15035 PF01842 ACT domain HCN55_15035 PF00800 Prephenate dehydratase HCN55_15040 PF01842 ACT domain HCN55_15045 PF01926 50S ribosome-binding GTPase HCN55_15045 PF01018 GTP1/OBG HCN55_15045 PF09269 Domain of unknown function (DUF1967) HCN55_15050 PF14682 Sporulation initiation phospho-transferase B, C-terminal HCN55_15050 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain HCN55_15060 PF01016 Ribosomal L27 protein HCN55_15065 PF04327 Cysteine protease Prp HCN55_15070 PF00829 Ribosomal prokaryotic L21 protein HCN55_15075 PF02163 Peptidase family M50 HCN55_15080 PF01551 Peptidase family M23 HCN55_15085 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain HCN55_15090 PF03775 Septum formation inhibitor MinC, C-terminal domain HCN55_15095 PF04093 rod shape-determining protein MreD HCN55_15100 PF04085 rod shape-determining protein MreC HCN55_15110 PF00633 Helix-hairpin-helix motif HCN55_15110 PF04002 RadC-like JAB domain HCN55_15115 PF02545 Maf-like protein HCN55_15120 PF05036 Sporulation related domain HCN55_15125 PF01478 Type IV leader peptidase family HCN55_15125 PF06750 Bacterial Peptidase A24 N-terminal domain HCN55_15130 PF02875 Mur ligase family, glutamate ligase domain HCN55_15130 PF08245 Mur ligase middle domain HCN55_15135 PF08264 Anticodon-binding domain of tRNA HCN55_15135 PF00133 tRNA synthetases class I (I, L, M and V) HCN55_15135 PF10458 Valyl tRNA synthetase tRNA binding arm HCN55_15150 PF01476 LysM domain HCN55_15155 PF00202 Aminotransferase class-III HCN55_15160 PF00490 Delta-aminolevulinic acid dehydratase HCN55_15165 PF02602 Uroporphyrinogen-III synthase HemD HCN55_15170 PF03900 Porphobilinogen deaminase, C-terminal domain HCN55_15170 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain HCN55_15175 PF01578 Cytochrome C assembly protein HCN55_15180 PF01488 Shikimate / quinate 5-dehydrogenase HCN55_15180 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain HCN55_15180 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain HCN55_15190 PF01926 50S ribosome-binding GTPase HCN55_15195 PF05362 Lon protease (S16) C-terminal proteolytic domain HCN55_15195 PF00004 ATPase family associated with various cellular activities (AAA) HCN55_15195 PF02190 ATP-dependent protease La (LON) substrate-binding domain HCN55_15200 PF05362 Lon protease (S16) C-terminal proteolytic domain HCN55_15200 PF00004 ATPase family associated with various cellular activities (AAA) HCN55_15205 PF07724 AAA domain (Cdc48 subfamily) HCN55_15205 PF06689 ClpX C4-type zinc finger HCN55_15205 PF10431 C-terminal, D2-small domain, of ClpB protein HCN55_15210 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase HCN55_15210 PF05698 Bacterial trigger factor protein (TF) C-terminus HCN55_15210 PF05697 Bacterial trigger factor protein (TF) HCN55_15220 PF00694 Aconitase C-terminal domain HCN55_15225 PF00330 Aconitase family (aconitate hydratase) HCN55_15230 PF00180 Isocitrate/isopropylmalate dehydrogenase HCN55_15235 PF08502 LeuA allosteric (dimerisation) domain HCN55_15235 PF00682 HMGL-like HCN55_15240 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain HCN55_15240 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain HCN55_15245 PF01842 ACT domain HCN55_15245 PF10369 Small subunit of acetolactate synthase HCN55_15250 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain HCN55_15250 PF00205 Thiamine pyrophosphate enzyme, central domain HCN55_15250 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain HCN55_15260 PF00583 Acetyltransferase (GNAT) family HCN55_15265 PF11181 Heat induced stress protein YflT HCN55_15265 PF09557 Domain of unknown function (DUF2382) HCN55_15275 PF12850 Calcineurin-like phosphoesterase superfamily domain HCN55_15280 PF01725 Ham1 family HCN55_15285 PF03725 3' exoribonuclease family, domain 2 HCN55_15285 PF01138 3' exoribonuclease family, domain 1 HCN55_15290 PF10646 Sporulation and spore germination HCN55_15295 PF01177 Asp/Glu/Hydantoin racemase HCN55_15300 PF01047 MarR family HCN55_15305 PF00196 Bacterial regulatory proteins, luxR family HCN55_15310 PF03061 Thioesterase superfamily HCN55_15315 PF13183 4Fe-4S dicluster domain HCN55_15315 PF13085 2Fe-2S iron-sulfur cluster binding domain HCN55_15320 PF00890 FAD binding domain HCN55_15320 PF02910 Fumarate reductase flavoprotein C-term HCN55_15325 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit HCN55_15330 PF10702 Protein of unknown function (DUF2507) HCN55_15335 PF01842 ACT domain HCN55_15335 PF13840 ACT domain HCN55_15335 PF00696 Amino acid kinase family HCN55_15340 PF08459 UvrC Helix-hairpin-helix N-terminal HCN55_15340 PF02151 UvrB/uvrC motif HCN55_15340 PF01541 GIY-YIG catalytic domain HCN55_15345 PF00085 Thioredoxin HCN55_15350 PF06964 Alpha-L-arabinofuranosidase C-terminal domain HCN55_15355 PF00766 Electron transfer flavoprotein FAD-binding domain HCN55_15355 PF01012 Electron transfer flavoprotein domain HCN55_15360 PF01012 Electron transfer flavoprotein domain HCN55_15365 PF00378 Enoyl-CoA hydratase/isomerase HCN55_15370 PF00440 Bacterial regulatory proteins, tetR family HCN55_15370 PF08359 YsiA-like protein, C-terminal region HCN55_15375 PF13193 AMP-binding enzyme C-terminal domain HCN55_15375 PF00501 AMP-binding enzyme HCN55_15380 PF03994 Domain of Unknown Function (DUF350) HCN55_15385 PF00488 MutS domain V HCN55_15385 PF01713 Smr domain HCN55_15390 PF14791 DNA polymerase beta thumb HCN55_15390 PF14716 Helix-hairpin-helix domain HCN55_15390 PF02811 PHP domain HCN55_15395 PF02674 Colicin V production protein HCN55_15400 PF05164 Cell division protein ZapA HCN55_15405 PF11858 Domain of unknown function (DUF3378) HCN55_15405 PF01351 Ribonuclease HII HCN55_15410 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain HCN55_15410 PF01588 Putative tRNA binding domain HCN55_15410 PF03147 Ferredoxin-fold anticodon binding domain HCN55_15410 PF03483 B3/4 domain HCN55_15410 PF03484 tRNA synthetase B5 domain HCN55_15415 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain HCN55_15415 PF01409 tRNA synthetases class II core domain (F) HCN55_15425 PF00588 SpoU rRNA Methylase family HCN55_15425 PF08032 RNA 2'-O ribose methyltransferase substrate binding HCN55_15430 PF14098 Small, acid-soluble spore protein I HCN55_15435 PF13556 PucR C-terminal helix-turn-helix domain HCN55_15435 PF17853 GGDEF-like domain HCN55_15435 PF05651 Putative sugar diacid recognition HCN55_15440 PF01565 FAD binding domain HCN55_15440 PF02913 FAD linked oxidases, C-terminal domain HCN55_15445 PF02754 Cysteine-rich domain HCN55_15445 PF13183 4Fe-4S dicluster domain HCN55_15450 PF12681 Glyoxalase-like domain HCN55_15460 PF13722 5TM C-terminal transporter carbon starvation CstA HCN55_15460 PF02554 Carbon starvation protein CstA HCN55_15465 PF06964 Alpha-L-arabinofuranosidase C-terminal domain HCN55_15470 PF00528 Binding-protein-dependent transport system inner membrane component HCN55_15475 PF00528 Binding-protein-dependent transport system inner membrane component HCN55_15480 PF01547 Bacterial extracellular solute-binding protein HCN55_15485 PF13685 Iron-containing alcohol dehydrogenase HCN55_15490 PF13344 Haloacid dehalogenase-like hydrolase HCN55_15495 PF00596 Class II Aldolase and Adducin N-terminal domain HCN55_15500 PF02782 FGGY family of carbohydrate kinases, C-terminal domain HCN55_15500 PF00370 FGGY family of carbohydrate kinases, N-terminal domain HCN55_15505 PF11762 L-arabinose isomerase C-terminal domain HCN55_15505 PF02610 L-arabinose isomerase HCN55_15510 PF04616 Glycosyl hydrolases family 43 HCN55_15515 PF05343 M42 glutamyl aminopeptidase HCN55_15525 PF06961 Protein of unknown function (DUF1294) HCN55_15530 PF00453 Ribosomal protein L20 HCN55_15535 PF01632 Ribosomal protein L35 HCN55_15540 PF05198 Translation initiation factor IF-3, N-terminal domain HCN55_15540 PF00707 Translation initiation factor IF-3, C-terminal domain HCN55_15550 PF04172 LrgB-like family HCN55_15555 PF03788 LrgA family HCN55_15560 PF00072 Response regulator receiver domain HCN55_15560 PF04397 LytTr DNA-binding domain HCN55_15565 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HCN55_15565 PF06580 Histidine kinase HCN55_15565 PF07694 5TMR of 5TMR-LYT HCN55_15570 PF13419 Haloacid dehalogenase-like hydrolase HCN55_15575 PF03129 Anticodon binding domain HCN55_15575 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) HCN55_15575 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain HCN55_15575 PF02824 TGS domain HCN55_15580 PF08812 YtxC-like family HCN55_15585 PF09335 SNARE associated Golgi protein HCN55_15590 PF07319 Primosomal protein DnaI N-terminus HCN55_15590 PF01695 IstB-like ATP binding protein HCN55_15595 PF07261 Replication initiation and membrane attachment HCN55_15600 PF03477 ATP cone domain HCN55_15605 PF02675 S-adenosylmethionine decarboxylase HCN55_15610 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain HCN55_15610 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain HCN55_15615 PF01638 HxlR-like helix-turn-helix HCN55_15620 PF07690 Major Facilitator Superfamily HCN55_15625 PF00248 Aldo/keto reductase family HCN55_15630 PF01121 Dephospho-CoA kinase HCN55_15635 PF02659 Putative manganese efflux pump HCN55_15640 PF06827 Zinc finger found in FPG and IleRS HCN55_15640 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain HCN55_15640 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain HCN55_15645 PF00476 DNA polymerase family A HCN55_15645 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain HCN55_15645 PF01367 5'-3' exonuclease, C-terminal SAM fold HCN55_15650 PF00989 PAS fold HCN55_15650 PF00512 His Kinase A (phospho-acceptor) domain HCN55_15650 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HCN55_15650 PF16736 Single Cache-like HCN55_15655 PF00072 Response regulator receiver domain HCN55_15655 PF00486 Transcriptional regulatory protein, C terminal HCN55_15660 PF00056 lactate/malate dehydrogenase, NAD binding domain HCN55_15660 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain HCN55_15665 PF00180 Isocitrate/isopropylmalate dehydrogenase HCN55_15670 PF00285 Citrate synthase, C-terminal domain HCN55_15675 PF04284 Protein of unknown function (DUF441) HCN55_15680 PF01594 AI-2E family transporter HCN55_15685 PF04186 FxsA cytoplasmic membrane protein HCN55_15690 PF00391 PEP-utilising enzyme, mobile domain HCN55_15690 PF02887 Pyruvate kinase, alpha/beta domain HCN55_15690 PF00224 Pyruvate kinase, barrel domain HCN55_15695 PF00365 Phosphofructokinase HCN55_15700 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit HCN55_15705 PF01039 Carboxyl transferase domain HCN55_15705 PF17848 Acetyl-coA carboxylase zinc finger domain HCN55_15710 PF00390 Malic enzyme, N-terminal domain HCN55_15710 PF03949 Malic enzyme, NAD binding domain HCN55_15715 PF14579 Helix-hairpin-helix motif HCN55_15715 PF07733 Bacterial DNA polymerase III alpha NTPase domain HCN55_15715 PF02811 PHP domain HCN55_15715 PF17657 Bacterial DNA polymerase III alpha subunit finger domain HCN55_15715 PF01336 OB-fold nucleic acid binding domain HCN55_15720 PF14034 Sporulation protein YtrH HCN55_15735 PF02272 DHHA1 domain HCN55_15735 PF01368 DHH family HCN55_15740 PF14007 YtpI-like protein HCN55_15745 PF07085 DRTGG domain HCN55_15745 PF00571 CBS domain HCN55_15745 PF00392 Bacterial regulatory proteins, gntR family HCN55_15745 PF03061 Thioesterase superfamily HCN55_15750 PF01925 Sulfite exporter TauE/SafE HCN55_15755 PF01546 Peptidase family M20/M25/M40 HCN55_15755 PF07687 Peptidase dimerisation domain HCN55_15760 PF01687 Riboflavin kinase HCN55_15765 PF00296 Luciferase-like monooxygenase HCN55_15770 PF00462 Glutaredoxin HCN55_15775 PF00296 Luciferase-like monooxygenase HCN55_15780 PF00005 ABC transporter HCN55_15785 PF00528 Binding-protein-dependent transport system inner membrane component HCN55_15790 PF00528 Binding-protein-dependent transport system inner membrane component HCN55_15795 PF00497 Bacterial extracellular solute-binding proteins, family 3 HCN55_15800 PF00497 Bacterial extracellular solute-binding proteins, family 3 HCN55_15805 PF00583 Acetyltransferase (GNAT) family HCN55_15810 PF03466 LysR substrate binding domain HCN55_15810 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HCN55_15830 PF00206 Lyase HCN55_15830 PF14698 Argininosuccinate lyase C-terminal HCN55_15835 PF00764 Arginosuccinate synthase HCN55_15840 PF00994 Probable molybdopterin binding domain HCN55_15845 PF00871 Acetokinase family HCN55_15855 PF02384 N-6 DNA Methylase HCN55_15860 PF08534 Redoxin HCN55_15865 PF09579 Sporulation protein YtfJ (Spore_YtfJ) HCN55_15870 PF11167 Protein of unknown function (DUF2953) HCN55_15875 PF06271 RDD family HCN55_15880 PF01343 Peptidase family S49 HCN55_15885 PF01513 ATP-NAD kinase HCN55_15890 PF07969 Amidohydrolase family HCN55_15895 PF00501 AMP-binding enzyme HCN55_15895 PF13193 AMP-binding enzyme C-terminal domain HCN55_15900 PF00269 Small, acid-soluble spore proteins, alpha/beta type HCN55_15905 PF02926 THUMP domain HCN55_15905 PF02568 Thiamine biosynthesis protein (ThiI) HCN55_15910 PF00266 Aminotransferase class-V HCN55_15915 PF05525 Branched-chain amino acid transport protein HCN55_15920 PF06160 Septation ring formation regulator, EzrA HCN55_15925 PF02811 PHP domain HCN55_15930 PF00440 Bacterial regulatory proteins, tetR family HCN55_15935 PF13185 GAF domain HCN55_15940 PF00990 Diguanylate cyclase, GGDEF domain HCN55_15950 PF00163 Ribosomal protein S4/S9 N-terminal domain HCN55_15950 PF01479 S4 domain HCN55_15955 PF00579 tRNA synthetases class I (W and Y) HCN55_15955 PF01479 S4 domain HCN55_15960 PF13193 AMP-binding enzyme C-terminal domain HCN55_15960 PF00501 AMP-binding enzyme HCN55_15965 PF00583 Acetyltransferase (GNAT) family HCN55_15970 PF00571 CBS domain HCN55_15975 PF00850 Histone deacetylase domain HCN55_15980 PF13677 Membrane MotB of proton-channel complex MotA/MotB HCN55_15980 PF00691 OmpA family HCN55_15985 PF01618 MotA/TolQ/ExbB proton channel family HCN55_15990 PF00356 Bacterial regulatory proteins, lacI family HCN55_15995 PF00793 DAHP synthetase I family HCN55_15995 PF01817 Chorismate mutase type II HCN55_16000 PF11009 Protein of unknown function (DUF2847) HCN55_16005 PF12732 YtxH-like protein HCN55_16010 PF06103 Bacterial protein of unknown function (DUF948) HCN55_16015 PF01225 Mur ligase family, catalytic domain HCN55_16015 PF08245 Mur ligase middle domain HCN55_16015 PF02875 Mur ligase family, glutamate ligase domain HCN55_16020 PF01580 FtsK/SpoIIIE family HCN55_16020 PF17854 FtsK alpha domain HCN55_16020 PF09397 Ftsk gamma domain HCN55_16025 PF14794 Domain of unknown function (DUF4479) HCN55_16025 PF01588 Putative tRNA binding domain HCN55_16030 PF07285 Protein of unknown function (DUF1444) HCN55_16035 PF00085 Thioredoxin HCN55_16045 PF11071 Nucleoside 2-deoxyribosyltransferase YtoQ HCN55_16050 PF05343 M42 glutamyl aminopeptidase HCN55_16055 PF03413 Peptidase propeptide and YPEB domain HCN55_16060 PF00390 Malic enzyme, N-terminal domain HCN55_16060 PF03949 Malic enzyme, NAD binding domain HCN55_16065 PF00753 Metallo-beta-lactamase superfamily HCN55_16070 PF02390 Putative methyltransferase HCN55_16075 PF14165 YtzH-like protein HCN55_16080 PF01636 Phosphotransferase enzyme family HCN55_16085 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) HCN55_16085 PF00128 Alpha amylase, catalytic domain HCN55_16085 PF17999 Pullulanase N1-terminal domain HCN55_16090 PF00781 Diacylglycerol kinase catalytic domain HCN55_16105 PF00291 Pyridoxal-phosphate dependent enzyme HCN55_16110 PF01546 Peptidase family M20/M25/M40 HCN55_16115 PF00860 Permease family HCN55_16120 PF05975 Bacterial ABC transporter protein EcsB HCN55_16125 PF00005 ABC transporter HCN55_16130 PF08220 DeoR-like helix-turn-helix domain HCN55_16135 PF01479 S4 domain HCN55_16135 PF00849 RNA pseudouridylate synthase HCN55_16140 PF01943 Polysaccharide biosynthesis protein HCN55_16140 PF14667 Polysaccharide biosynthesis C-terminal domain HCN55_16150 PF02028 BCCT, betaine/carnitine/choline family transporter HCN55_16155 PF10957 Sporulation protein Cse60 HCN55_16160 PF04854 Protein of unknown function, DUF624 HCN55_16165 PF01408 Oxidoreductase family, NAD-binding Rossmann fold HCN55_16165 PF02894 Oxidoreductase family, C-terminal alpha/beta domain HCN55_16175 PF07470 Glycosyl Hydrolase Family 88 HCN55_16195 PF00528 Binding-protein-dependent transport system inner membrane component HCN55_16200 PF12833 Helix-turn-helix domain HCN55_16200 PF17853 GGDEF-like domain HCN55_16205 PF13416 Bacterial extracellular solute-binding protein HCN55_16210 PF00528 Binding-protein-dependent transport system inner membrane component HCN55_16215 PF01370 NAD dependent epimerase/dehydratase family HCN55_16220 PF00067 Cytochrome P450 HCN55_16225 PF06968 Biotin and Thiamin Synthesis associated domain HCN55_16225 PF04055 Radical SAM superfamily HCN55_16235 PF00155 Aminotransferase class I and II HCN55_16240 PF00202 Aminotransferase class-III HCN55_16245 PF03744 6-carboxyhexanoate--CoA ligase HCN55_16250 PF01738 Dienelactone hydrolase family HCN55_16255 PF00356 Bacterial regulatory proteins, lacI family HCN55_16260 PF01547 Bacterial extracellular solute-binding protein HCN55_16265 PF00528 Binding-protein-dependent transport system inner membrane component HCN55_16270 PF00528 Binding-protein-dependent transport system inner membrane component HCN55_16275 PF11975 Family 4 glycosyl hydrolase C-terminal domain HCN55_16275 PF02056 Family 4 glycosyl hydrolase HCN55_16280 PF00581 Rhodanese-like domain HCN55_16285 PF08264 Anticodon-binding domain of tRNA HCN55_16285 PF00133 tRNA synthetases class I (I, L, M and V) HCN55_16285 PF13603 Leucyl-tRNA synthetase, Domain 2 HCN55_16285 PF09334 tRNA synthetases class I (M) HCN55_16290 PF14074 Protein of unknown function (DUF4257) HCN55_16295 PF01740 STAS domain HCN55_16295 PF13426 PAS domain HCN55_16300 PF07690 Major Facilitator Superfamily HCN55_16305 PF04791 LMBR1-like membrane protein HCN55_16310 PF02687 FtsX-like permease family HCN55_16315 PF00005 ABC transporter HCN55_16320 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HCN55_16325 PF00486 Transcriptional regulatory protein, C terminal HCN55_16325 PF00072 Response regulator receiver domain HCN55_16330 PF02687 FtsX-like permease family HCN55_16330 PF12704 MacB-like periplasmic core domain HCN55_16335 PF00005 ABC transporter HCN55_16350 PF00005 ABC transporter HCN55_16355 PF00392 Bacterial regulatory proteins, gntR family HCN55_16365 PF10732 Protein of unknown function (DUF2524) HCN55_16370 PF04055 Radical SAM superfamily HCN55_16370 PF16199 Radical_SAM C-terminal domain HCN55_16375 PF06962 Putative rRNA methylase HCN55_16380 PF10776 Protein of unknown function (DUF2600) HCN55_16385 PF12146 Serine aminopeptidase, S33 HCN55_16390 PF00132 Bacterial transferase hexapeptide (six repeats) HCN55_16395 PF00324 Amino acid permease HCN55_16400 PF00733 Asparagine synthase HCN55_16400 PF13537 Glutamine amidotransferase domain HCN55_16410 PF01293 Phosphoenolpyruvate carboxykinase HCN55_16415 PF10763 Protein of unknown function (DUF2584) HCN55_16420 PF00326 Prolyl oligopeptidase family HCN55_16430 PF00005 ABC transporter HCN55_16435 PF00528 Binding-protein-dependent transport system inner membrane component HCN55_16440 PF00293 NUDIX domain HCN55_16445 PF05105 Bacteriophage holin family HCN55_16450 PF00210 Ferritin-like domain HCN55_16460 PF13115 YtkA-like HCN55_16465 PF02664 S-Ribosylhomocysteinase (LuxS) HCN55_16470 PF01809 Putative membrane protein insertion efficiency factor HCN55_16475 PF00484 Carbonic anhydrase HCN55_16480 PF01197 Ribosomal protein L31 HCN55_16485 PF01654 Cytochrome bd terminal oxidase subunit I HCN55_16490 PF02322 Cytochrome bd terminal oxidase subunit II HCN55_16495 PF07561 Domain of Unknown Function (DUF1540) HCN55_16500 PF00950 ABC 3 transport family HCN55_16505 PF00950 ABC 3 transport family HCN55_16510 PF00005 ABC transporter HCN55_16515 PF01297 Zinc-uptake complex component A periplasmic HCN55_16520 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain HCN55_16520 PF13378 Enolase C-terminal domain-like HCN55_16525 PF00501 AMP-binding enzyme HCN55_16525 PF13193 AMP-binding enzyme C-terminal domain HCN55_16530 PF00378 Enoyl-CoA hydratase/isomerase HCN55_16535 PF00561 alpha/beta hydrolase fold HCN55_16540 PF16582 Middle domain of thiamine pyrophosphate HCN55_16540 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain HCN55_16540 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain HCN55_16545 PF00425 chorismate binding enzyme HCN55_16550 PF01258 Prokaryotic dksA/traR C4-type zinc finger HCN55_16555 PF00483 Nucleotidyl transferase HCN55_16560 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain HCN55_16560 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain HCN55_16560 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain HCN55_16565 PF01370 NAD dependent epimerase/dehydratase family HCN55_16570 PF13439 Glycosyltransferase Family 4 HCN55_16570 PF00534 Glycosyl transferases group 1 HCN55_16585 PF13439 Glycosyltransferase Family 4 HCN55_16585 PF00534 Glycosyl transferases group 1 HCN55_16590 PF01636 Phosphotransferase enzyme family HCN55_16595 PF03073 TspO/MBR family HCN55_16600 PF00343 Carbohydrate phosphorylase HCN55_16605 PF08323 Starch synthase catalytic domain HCN55_16605 PF00534 Glycosyl transferases group 1 HCN55_16610 PF00483 Nucleotidyl transferase HCN55_16615 PF00483 Nucleotidyl transferase HCN55_16620 PF00128 Alpha amylase, catalytic domain HCN55_16620 PF02806 Alpha amylase, C-terminal all-beta domain HCN55_16620 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) HCN55_16745 PF09515 Thiamine transporter protein (Thia_YuaJ) HCN55_16750 PF00583 Acetyltransferase (GNAT) family HCN55_16755 PF01145 SPFH domain / Band 7 family HCN55_16755 PF15975 Flotillin HCN55_16765 PF12867 DinB superfamily HCN55_16775 PF00465 Iron-containing alcohol dehydrogenase HCN55_16780 PF00171 Aldehyde dehydrogenase family HCN55_16790 PF17735 Biofilm surface layer A HCN55_16795 PF02080 TrkA-C domain HCN55_16795 PF02254 TrkA-N domain HCN55_16800 PF02386 Cation transport protein HCN55_16805 PF05360 yiaA/B two helix domain HCN55_16810 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase HCN55_16810 PF13457 GW (Gly-Tryp) dipeptide domain HCN55_16815 PF07690 Major Facilitator Superfamily HCN55_16820 PF05995 Cysteine dioxygenase type I HCN55_16830 PF02673 Bacitracin resistance protein BacA HCN55_16835 PF01594 AI-2E family transporter HCN55_16840 PF01408 Oxidoreductase family, NAD-binding Rossmann fold HCN55_16840 PF02894 Oxidoreductase family, C-terminal alpha/beta domain HCN55_16845 PF06134 L-rhamnose isomerase (RhaA) HCN55_16850 PF05336 L-rhamnose mutarotase HCN55_16855 PF00370 FGGY family of carbohydrate kinases, N-terminal domain HCN55_16855 PF02782 FGGY family of carbohydrate kinases, C-terminal domain HCN55_16860 PF00455 DeoR C terminal sensor domain HCN55_16860 PF08220 DeoR-like helix-turn-helix domain HCN55_16865 PF00596 Class II Aldolase and Adducin N-terminal domain HCN55_16870 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HCN55_16870 PF02743 Cache domain HCN55_16870 PF00672 HAMP domain HCN55_16875 PF00672 HAMP domain HCN55_16875 PF02743 Cache domain HCN55_16875 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HCN55_16880 PF02743 Cache domain HCN55_16880 PF00672 HAMP domain HCN55_16880 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HCN55_16885 PF00672 HAMP domain HCN55_16885 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HCN55_16885 PF02743 Cache domain HCN55_16900 PF01894 Uncharacterised protein family UPF0047 HCN55_16910 PF00128 Alpha amylase, catalytic domain HCN55_16910 PF16657 Maltogenic Amylase, C-terminal domain HCN55_16915 PF00571 CBS domain HCN55_16915 PF03471 Transporter associated domain HCN55_16915 PF01595 Cyclin M transmembrane N-terminal domain HCN55_16920 PF04298 Putative neutral zinc metallopeptidase HCN55_16930 PF11458 Membrane-integrating protein Mistic HCN55_16935 PF02254 TrkA-N domain HCN55_16935 PF07885 Ion channel HCN55_16940 PF08868 YugN-like family HCN55_16950 PF00342 Phosphoglucose isomerase HCN55_16955 PF00465 Iron-containing alcohol dehydrogenase HCN55_16960 PF00465 Iron-containing alcohol dehydrogenase HCN55_16965 PF04070 Domain of unknown function (DUF378) HCN55_16970 PF00575 S1 RNA binding domain HCN55_16975 PF00155 Aminotransferase class I and II HCN55_16980 PF01037 Lrp/AsnC ligand binding domain HCN55_16985 PF08386 TAP-like protein HCN55_16985 PF00561 alpha/beta hydrolase fold HCN55_16990 PF08958 Domain of unknown function (DUF1871) HCN55_16995 PF00155 Aminotransferase class I and II HCN55_17000 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HCN55_17000 PF00512 His Kinase A (phospho-acceptor) domain HCN55_17005 PF08810 Kinase associated protein B HCN55_17010 PF00929 Exonuclease HCN55_17020 PF07690 Major Facilitator Superfamily HCN55_17025 PF00912 Transglycosylase HCN55_17025 PF00905 Penicillin binding protein transpeptidase domain HCN55_17030 PF04134 Protein of unknown function, DUF393 HCN55_17035 PF17328 Family of unknown function (DUF5366) HCN55_17040 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HCN55_17040 PF00989 PAS fold HCN55_17040 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain HCN55_17040 PF17203 Single cache domain 3 HCN55_17045 PF00072 Response regulator receiver domain HCN55_17070 PF03390 2-hydroxycarboxylate transporter family HCN55_17080 PF13244 Domain of unknown function (DUF4040) HCN55_17080 PF00361 Proton-conducting membrane transporter HCN55_17080 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus HCN55_17085 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter HCN55_17090 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L HCN55_17095 PF00361 Proton-conducting membrane transporter HCN55_17100 PF01899 Na+/H+ ion antiporter subunit HCN55_17105 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) HCN55_17110 PF03334 Na+/H+ antiporter subunit HCN55_17115 PF03061 Thioesterase superfamily HCN55_17120 PF00072 Response regulator receiver domain HCN55_17120 PF00196 Bacterial regulatory proteins, luxR family HCN55_17125 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HCN55_17125 PF07730 Histidine kinase HCN55_17135 PF00348 Polyprenyl synthetase HCN55_17140 PF08181 DegQ (SacQ) family HCN55_17155 PF00563 EAL domain HCN55_17155 PF08668 HDOD domain HCN55_17160 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain HCN55_17160 PF17956 Nicotinate phosphoribosyltransferase C-terminal domain HCN55_17160 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family HCN55_17165 PF00857 Isochorismatase family HCN55_17170 PF07997 Protein of unknown function (DUF1694) HCN55_17175 PF14166 YueH-like protein HCN55_17180 PF10676 Spore germination protein gerPA/gerPF HCN55_17185 PF01594 AI-2E family transporter HCN55_17190 PF10049 Protein of unknown function (DUF2283) HCN55_17195 PF10842 Protein of unknown function (DUF2642) HCN55_17200 PF01966 HD domain HCN55_17205 PF00106 short chain dehydrogenase HCN55_17210 PF17355 Family of unknown function (DUF5383) HCN55_17220 PF12538 DNA transporter HCN55_17220 PF01580 FtsK/SpoIIIE family HCN55_17225 PF10140 WXG100 protein secretion system (Wss), protein YukC HCN55_17230 PF08817 WXG100 protein secretion system (Wss), protein YukD HCN55_17235 PF06013 Proteins of 100 residues with WXG HCN55_17240 PF13556 PucR C-terminal helix-turn-helix domain HCN55_17240 PF17853 GGDEF-like domain HCN55_17240 PF06018 CodY GAF-like domain HCN55_17245 PF01262 Alanine dehydrogenase/PNT, C-terminal domain HCN55_17245 PF05222 Alanine dehydrogenase/PNT, N-terminal domain HCN55_17250 PF10042 Uncharacterized conserved protein (DUF2278) HCN55_17255 PF03621 MbtH-like protein HCN55_17260 PF00501 AMP-binding enzyme HCN55_17260 PF13193 AMP-binding enzyme C-terminal domain HCN55_17260 PF00668 Condensation domain HCN55_17260 PF00550 Phosphopantetheine attachment site HCN55_17260 PF00975 Thioesterase domain HCN55_17265 PF00550 Phosphopantetheine attachment site HCN55_17265 PF00857 Isochorismatase family HCN55_17270 PF00501 AMP-binding enzyme HCN55_17270 PF13193 AMP-binding enzyme C-terminal domain HCN55_17275 PF00425 chorismate binding enzyme HCN55_17280 PF00106 short chain dehydrogenase HCN55_17285 PF00756 Putative esterase HCN55_17290 PF00174 Oxidoreductase molybdopterin binding domain HCN55_17295 PF02632 BioY family HCN55_17300 PF13726 Na+-H+ antiporter family HCN55_17300 PF03553 Na+/H+ antiporter family HCN55_17305 PF02789 Cytosol aminopeptidase family, N-terminal domain HCN55_17305 PF00883 Cytosol aminopeptidase family, catalytic domain HCN55_17310 PF02681 Divergent PAP2 family HCN55_17315 PF06725 3D domain HCN55_17320 PF14068 Putative membrane protein HCN55_17325 PF17302 Family of unknown function (DUF5351) HCN55_17330 PF07992 Pyridine nucleotide-disulphide oxidoreductase HCN55_17335 PF07992 Pyridine nucleotide-disulphide oxidoreductase HCN55_17345 PF00478 IMP dehydrogenase / GMP reductase domain HCN55_17350 PF04299 Putative FMN-binding domain HCN55_17355 PF00583 Acetyltransferase (GNAT) family HCN55_17360 PF01521 Iron-sulphur cluster biosynthesis HCN55_17365 PF01678 Diaminopimelate epimerase HCN55_17370 PF01773 Na+ dependent nucleoside transporter N-terminus HCN55_17370 PF07662 Na+ dependent nucleoside transporter C-terminus HCN55_17375 PF07293 Protein of unknown function (DUF1450) HCN55_17380 PF07992 Pyridine nucleotide-disulphide oxidoreductase HCN55_17385 PF07315 Protein of unknown function (DUF1462) HCN55_17390 PF01106 NifU-like domain HCN55_17395 PF07676 WD40-like Beta Propeller Repeat HCN55_17395 PF00326 Prolyl oligopeptidase family HCN55_17400 PF00288 GHMP kinases N terminal domain HCN55_17400 PF08544 GHMP kinases C terminal HCN55_17405 PF00291 Pyridoxal-phosphate dependent enzyme HCN55_17410 PF01842 ACT domain HCN55_17410 PF00742 Homoserine dehydrogenase HCN55_17410 PF03447 Homoserine dehydrogenase, NAD binding domain HCN55_17420 PF04608 Phosphatidylglycerophosphatase A HCN55_17425 PF13344 Haloacid dehalogenase-like hydrolase HCN55_17430 PF01934 Protein of unknown function DUF86 HCN55_17435 PF06265 Protein of unknown function (DUF1027) HCN55_17440 PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) HCN55_17445 PF04055 Radical SAM superfamily HCN55_17445 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family HCN55_17450 PF01551 Peptidase family M23 HCN55_17455 PF09560 Sporulation protein YunB (Spo_YunB) HCN55_17460 PF08827 Domain of unknown function (DUF1805) HCN55_17465 PF02872 5'-nucleotidase, C-terminal domain HCN55_17470 PF01925 Sulfite exporter TauE/SafE HCN55_17475 PF01904 Protein of unknown function DUF72 HCN55_17490 PF07905 Purine catabolism regulatory protein-like family HCN55_17490 PF13556 PucR C-terminal helix-turn-helix domain HCN55_17490 PF17853 GGDEF-like domain HCN55_17495 PF00860 Permease family HCN55_17500 PF00860 Permease family HCN55_17505 PF01014 Uricase HCN55_17505 PF09349 OHCU decarboxylase HCN55_17510 PF00576 HIUase/Transthyretin family HCN55_17515 PF09680 Family of unknown function HCN55_17520 PF00111 2Fe-2S iron-sulfur cluster binding domain HCN55_17520 PF01799 [2Fe-2S] binding domain HCN55_17525 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase HCN55_17525 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain HCN55_17530 PF00941 FAD binding domain in molybdopterin dehydrogenase HCN55_17535 PF12804 MobA-like NTP transferase domain HCN55_17540 PF02625 XdhC and CoxI family HCN55_17540 PF13478 XdhC Rossmann domain HCN55_17545 PF00266 Aminotransferase class-V HCN55_17550 PF01546 Peptidase family M20/M25/M40 HCN55_17560 PF04231 Endonuclease I HCN55_17565 PF00005 ABC transporter HCN55_17565 PF03459 TOBE domain HCN55_17565 PF17912 MalK OB fold domain HCN55_17575 PF00294 pfkB family carbohydrate kinase HCN55_17580 PF00528 Binding-protein-dependent transport system inner membrane component HCN55_17585 PF00528 Binding-protein-dependent transport system inner membrane component HCN55_17590 PF01547 Bacterial extracellular solute-binding protein HCN55_17595 PF01380 SIS domain HCN55_17600 PF01541 GIY-YIG catalytic domain HCN55_17605 PF01266 FAD dependent oxidoreductase HCN55_17620 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily HCN55_17630 PF01458 Uncharacterized protein family (UPF0051) HCN55_17635 PF01592 NifU-like N terminal domain HCN55_17640 PF00266 Aminotransferase class-V HCN55_17645 PF01458 Uncharacterized protein family (UPF0051) HCN55_17650 PF00005 ABC transporter HCN55_17660 PF02627 Carboxymuconolactone decarboxylase family HCN55_17665 PF03180 NLPA lipoprotein HCN55_17670 PF00528 Binding-protein-dependent transport system inner membrane component HCN55_17675 PF09383 NIL domain HCN55_17675 PF00005 ABC transporter HCN55_17680 PF02036 SCP-2 sterol transfer family HCN55_17685 PF00085 Thioredoxin HCN55_17690 PF01751 Toprim domain HCN55_17695 PF10830 Protein of unknown function (DUF2553) HCN55_17700 PF01597 Glycine cleavage H-protein HCN55_17705 PF03960 ArsC family HCN55_17710 PF02771 Acyl-CoA dehydrogenase, N-terminal domain HCN55_17710 PF02770 Acyl-CoA dehydrogenase, middle domain HCN55_17710 PF00441 Acyl-CoA dehydrogenase, C-terminal domain HCN55_17715 PF00108 Thiolase, N-terminal domain HCN55_17715 PF02803 Thiolase, C-terminal domain HCN55_17720 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain HCN55_17720 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain HCN55_17720 PF00378 Enoyl-CoA hydratase/isomerase HCN55_17725 PF14115 YuzL-like protein HCN55_17730 PF01619 Proline dehydrogenase HCN55_17740 PF07875 Coat F domain HCN55_17745 PF01047 MarR family HCN55_17750 PF07690 Major Facilitator Superfamily HCN55_17755 PF14552 Tautomerase enzyme HCN55_17765 PF03466 LysR substrate binding domain HCN55_17765 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HCN55_17770 PF10835 Protein of unknown function (DUF2573) HCN55_17775 PF00005 ABC transporter HCN55_17780 PF14039 YusW-like protein HCN55_17790 PF00106 short chain dehydrogenase HCN55_17795 PF00210 Ferritin-like domain HCN55_17800 PF13180 PDZ domain HCN55_17805 PF00486 Transcriptional regulatory protein, C terminal HCN55_17805 PF00072 Response regulator receiver domain HCN55_17810 PF00672 HAMP domain HCN55_17810 PF00512 His Kinase A (phospho-acceptor) domain HCN55_17810 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HCN55_17820 PF00440 Bacterial regulatory proteins, tetR family HCN55_17825 PF00206 Lyase HCN55_17825 PF10415 Fumarase C C-terminus HCN55_17830 PF13113 Protein of unknown function (DUF3970) HCN55_17835 PF03323 Bacillus/Clostridium GerA spore germination protein HCN55_17840 PF03845 Spore germination protein HCN55_17845 PF05504 Spore germination B3/ GerAC like, C-terminal HCN55_17850 PF00072 Response regulator receiver domain HCN55_17850 PF00196 Bacterial regulatory proteins, luxR family HCN55_17855 PF00672 HAMP domain HCN55_17855 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HCN55_17855 PF07730 Histidine kinase HCN55_17860 PF09922 Cell wall-active antibiotics response 4TMS YvqF HCN55_17865 PF13349 Putative adhesin HCN55_17870 PF04012 PspA/IM30 family HCN55_17880 PF07690 Major Facilitator Superfamily HCN55_17885 PF01923 Cobalamin adenosyltransferase HCN55_17890 PF00005 ABC transporter HCN55_17895 PF01032 FecCD transport family HCN55_17900 PF01497 Periplasmic binding protein HCN55_17905 PF00106 short chain dehydrogenase HCN55_17910 PF08450 SMP-30/Gluconolactonase/LRE-like region HCN55_17915 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HCN55_17915 PF00512 His Kinase A (phospho-acceptor) domain HCN55_17920 PF00072 Response regulator receiver domain HCN55_17920 PF00486 Transcriptional regulatory protein, C terminal HCN55_17930 PF04545 Sigma-70, region 4 HCN55_17935 PF12841 YvrJ protein family HCN55_17940 PF00190 Cupin HCN55_17945 PF14184 Regulatory protein YrvL HCN55_17950 PF02687 FtsX-like permease family HCN55_17950 PF12704 MacB-like periplasmic core domain HCN55_17955 PF00005 ABC transporter HCN55_17960 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion HCN55_17965 PF00005 ABC transporter HCN55_17970 PF01032 FecCD transport family HCN55_17975 PF01032 FecCD transport family HCN55_17980 PF01497 Periplasmic binding protein HCN55_17985 PF13520 Amino acid permease HCN55_17990 PF09575 Small spore protein J (Spore_SspJ) HCN55_17995 PF04307 LexA-binding, inner membrane-associated putative hydrolase HCN55_18000 PF00884 Sulfatase HCN55_18005 PF12727 PBP superfamily domain HCN55_18005 PF12728 Helix-turn-helix domain HCN55_18015 PF00528 Binding-protein-dependent transport system inner membrane component HCN55_18020 PF00248 Aldo/keto reductase family HCN55_18030 PF00999 Sodium/hydrogen exchanger family HCN55_18035 PF01077 Nitrite and sulphite reductase 4Fe-4S domain HCN55_18035 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain HCN55_18040 PF00175 Oxidoreductase NAD-binding domain HCN55_18040 PF00258 Flavodoxin HCN55_18040 PF00667 FAD binding domain HCN55_18045 PF13538 UvrD-like helicase C-terminal domain HCN55_18050 PF03458 UPF0126 domain HCN55_18055 PF02600 Disulfide bond formation protein DsbB HCN55_18060 PF13462 Thioredoxin HCN55_18065 PF00403 Heavy-metal-associated domain HCN55_18070 PF00403 Heavy-metal-associated domain HCN55_18075 PF00403 Heavy-metal-associated domain HCN55_18080 PF02583 Metal-sensitive transcriptional repressor HCN55_18085 PF02894 Oxidoreductase family, C-terminal alpha/beta domain HCN55_18085 PF01408 Oxidoreductase family, NAD-binding Rossmann fold HCN55_18090 PF02525 Flavodoxin-like fold HCN55_18100 PF17314 Family of unknown function (DUF5360) HCN55_18105 PF00893 Small Multidrug Resistance protein HCN55_18110 PF00440 Bacterial regulatory proteins, tetR family HCN55_18115 PF00106 short chain dehydrogenase HCN55_18125 PF01668 SmpB protein HCN55_18130 PF08206 Ribonuclease B OB domain HCN55_18130 PF17876 Cold shock domain HCN55_18130 PF00773 RNB domain HCN55_18130 PF00575 S1 RNA binding domain HCN55_18135 PF12146 Serine aminopeptidase, S33 HCN55_18140 PF03840 Preprotein translocase SecG subunit HCN55_18145 PF00561 alpha/beta hydrolase fold HCN55_18150 PF01381 Helix-turn-helix HCN55_18165 PF01638 HxlR-like helix-turn-helix HCN55_18170 PF12729 Four helix bundle sensory module for signal transduction HCN55_18170 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HCN55_18170 PF00672 HAMP domain HCN55_18175 PF00528 Binding-protein-dependent transport system inner membrane component HCN55_18180 PF04069 Substrate binding domain of ABC-type glycine betaine transport system HCN55_18185 PF00528 Binding-protein-dependent transport system inner membrane component HCN55_18190 PF00005 ABC transporter HCN55_18190 PF00571 CBS domain HCN55_18195 PF12802 MarR family HCN55_18200 PF17418 Sporulation delaying protein SdpA HCN55_18205 PF05090 Vitamin K-dependent gamma-carboxylase HCN55_18215 PF13630 SdpI/YhfL protein family HCN55_18215 PF07853 Protein of unknown function (DUF1648) HCN55_18220 PF01022 Bacterial regulatory protein, arsR family HCN55_18225 PF00528 Binding-protein-dependent transport system inner membrane component HCN55_18230 PF04069 Substrate binding domain of ABC-type glycine betaine transport system HCN55_18235 PF00528 Binding-protein-dependent transport system inner membrane component HCN55_18240 PF00005 ABC transporter HCN55_18240 PF00571 CBS domain HCN55_18245 PF12802 MarR family HCN55_18250 PF01914 MarC family integral membrane protein HCN55_18255 PF11724 YvbH-like oligomerisation region HCN55_18255 PF08000 Bacterial PH domain HCN55_18265 PF13240 zinc-ribbon domain HCN55_18270 PF00583 Acetyltransferase (GNAT) family HCN55_18275 PF03952 Enolase, N-terminal domain HCN55_18275 PF00113 Enolase, C-terminal TIM barrel domain HCN55_18280 PF01676 Metalloenzyme superfamily HCN55_18280 PF06415 BPG-independent PGAM N-terminus (iPGM_N) HCN55_18285 PF00121 Triosephosphate isomerase HCN55_18290 PF00162 Phosphoglycerate kinase HCN55_18295 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain HCN55_18295 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain HCN55_18300 PF04198 Putative sugar-binding domain HCN55_18305 PF00083 Sugar (and other) transporter HCN55_18310 PF00392 Bacterial regulatory proteins, gntR family HCN55_18315 PF00296 Luciferase-like monooxygenase HCN55_18320 PF03466 LysR substrate binding domain HCN55_18320 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HCN55_18325 PF00892 EamA-like transporter family HCN55_18330 PF00324 Amino acid permease HCN55_18335 PF00704 Glycosyl hydrolases family 18 HCN55_18340 PF02589 LUD domain HCN55_18345 PF11870 Domain of unknown function (DUF3390) HCN55_18345 PF13183 4Fe-4S dicluster domain HCN55_18345 PF02589 LUD domain HCN55_18350 PF02754 Cysteine-rich domain HCN55_18355 PF00072 Response regulator receiver domain HCN55_18355 PF00196 Bacterial regulatory proteins, luxR family HCN55_18360 PF07730 Histidine kinase HCN55_18360 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HCN55_18370 PF00005 ABC transporter HCN55_18375 PF12697 Alpha/beta hydrolase family HCN55_18380 PF07228 Stage II sporulation protein E (SpoIIE) HCN55_18380 PF13426 PAS domain HCN55_18385 PF07745 Glycosyl hydrolase family 53 HCN55_18390 PF02449 Beta-galactosidase HCN55_18390 PF08533 Beta-galactosidase C-terminal domain HCN55_18390 PF08532 Beta-galactosidase trimerisation domain HCN55_18395 PF00528 Binding-protein-dependent transport system inner membrane component HCN55_18400 PF00528 Binding-protein-dependent transport system inner membrane component HCN55_18405 PF13416 Bacterial extracellular solute-binding protein HCN55_18410 PF00356 Bacterial regulatory proteins, lacI family HCN55_18415 PF07729 FCD domain HCN55_18415 PF00392 Bacterial regulatory proteins, gntR family HCN55_18420 PF02652 L-lactate permease HCN55_18425 PF04963 Sigma-54 factor, core binding domain HCN55_18425 PF00309 Sigma-54 factor, Activator interacting domain (AID) HCN55_18425 PF04552 Sigma-54, DNA binding domain HCN55_18430 PF09628 YvfG protein HCN55_18435 PF04230 Polysaccharide pyruvyl transferase HCN55_18440 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family HCN55_18445 PF17836 PglD N-terminal domain HCN55_18445 PF00132 Bacterial transferase hexapeptide (six repeats) HCN55_18450 PF02397 Bacterial sugar transferase HCN55_18455 PF01943 Polysaccharide biosynthesis protein HCN55_18455 PF14667 Polysaccharide biosynthesis C-terminal domain HCN55_18460 PF00535 Glycosyl transferase family 2 HCN55_18465 PF04230 Polysaccharide pyruvyl transferase HCN55_18470 PF00535 Glycosyl transferase family 2 HCN55_18480 PF13439 Glycosyltransferase Family 4 HCN55_18480 PF00534 Glycosyl transferases group 1 HCN55_18485 PF00535 Glycosyl transferase family 2 HCN55_18490 PF13439 Glycosyltransferase Family 4 HCN55_18490 PF00534 Glycosyl transferases group 1 HCN55_18495 PF02719 Polysaccharide biosynthesis protein HCN55_18500 PF13614 AAA domain HCN55_18505 PF02706 Chain length determinant protein HCN55_18510 PF08671 Anti-repressor SinI HCN55_18510 PF01381 Helix-turn-helix HCN55_18515 PF00135 Carboxylesterase family HCN55_18525 PF05870 Phenolic acid decarboxylase (PAD) HCN55_18535 PF01177 Asp/Glu/Hydantoin racemase HCN55_18540 PF00144 Beta-lactamase HCN55_18540 PF11954 Domain of unknown function (DUF3471) HCN55_18545 PF02435 Levansucrase/Invertase HCN55_18550 PF00251 Glycosyl hydrolases family 32 N-terminal domain HCN55_18550 PF08244 Glycosyl hydrolases family 32 C terminal HCN55_18555 PF13520 Amino acid permease HCN55_18560 PF17934 Tetracyclin repressor-like, C-terminal domain HCN55_18560 PF00440 Bacterial regulatory proteins, tetR family HCN55_18565 PF00893 Small Multidrug Resistance protein HCN55_18570 PF00893 Small Multidrug Resistance protein HCN55_18575 PF11553 Protein of unknown function (DUF3231) HCN55_18580 PF08031 Berberine and berberine like HCN55_18580 PF01565 FAD binding domain HCN55_18585 PF01734 Patatin-like phospholipase HCN55_18595 PF00574 Clp protease HCN55_18600 PF13419 Haloacid dehalogenase-like hydrolase HCN55_18605 PF00128 Alpha amylase, catalytic domain HCN55_18605 PF16657 Maltogenic Amylase, C-terminal domain HCN55_18610 PF03632 Glycosyl hydrolase family 65 central catalytic domain HCN55_18610 PF03633 Glycosyl hydrolase family 65, C-terminal domain HCN55_18610 PF03636 Glycosyl hydrolase family 65, N-terminal domain HCN55_18615 PF06691 Protein of unknown function (DUF1189) HCN55_18620 PF00528 Binding-protein-dependent transport system inner membrane component HCN55_18625 PF00528 Binding-protein-dependent transport system inner membrane component HCN55_18630 PF13416 Bacterial extracellular solute-binding protein HCN55_18635 PF02903 Alpha amylase, N-terminal ig-like domain HCN55_18635 PF00128 Alpha amylase, catalytic domain HCN55_18640 PF00356 Bacterial regulatory proteins, lacI family HCN55_18645 PF03641 Possible lysine decarboxylase HCN55_18650 PF03819 MazG nucleotide pyrophosphohydrolase domain HCN55_18655 PF00916 Sulfate permease family HCN55_18655 PF01740 STAS domain HCN55_18660 PF00484 Carbonic anhydrase HCN55_18665 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain HCN55_18665 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain HCN55_18670 PF02687 FtsX-like permease family HCN55_18675 PF00005 ABC transporter HCN55_18680 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HCN55_18685 PF00486 Transcriptional regulatory protein, C terminal HCN55_18685 PF00072 Response regulator receiver domain HCN55_18695 PF00797 N-acetyltransferase HCN55_18700 PF00381 PTS HPr component phosphorylation site HCN55_18705 PF14527 WhiA LAGLIDADG-like domain HCN55_18705 PF02650 WhiA C-terminal HTH domain HCN55_18705 PF10298 WhiA N-terminal LAGLIDADG-like domain HCN55_18710 PF01933 Uncharacterised protein family UPF0052 HCN55_18715 PF03668 P-loop ATPase protein family HCN55_18720 PF00293 NUDIX domain HCN55_18725 PF07992 Pyridine nucleotide-disulphide oxidoreductase HCN55_18730 PF00877 NlpC/P60 family HCN55_18740 PF00664 ABC transporter transmembrane region HCN55_18740 PF00005 ABC transporter HCN55_18760 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase HCN55_18760 PF01502 Phosphoribosyl-AMP cyclohydrolase HCN55_18765 PF00977 Histidine biosynthesis protein HCN55_18770 PF00977 Histidine biosynthesis protein HCN55_18775 PF00117 Glutamine amidotransferase class-I HCN55_18780 PF00475 Imidazoleglycerol-phosphate dehydratase HCN55_18785 PF00815 Histidinol dehydrogenase HCN55_18790 PF01634 ATP phosphoribosyltransferase HCN55_18795 PF13393 Histidyl-tRNA synthetase HCN55_18800 PF13529 Peptidase_C39 like family HCN55_18805 PF03211 Pectate lyase HCN55_18810 PF14602 Hexapeptide repeat of succinyl-transferase HCN55_18815 PF13419 Haloacid dehalogenase-like hydrolase HCN55_18820 PF07670 Nucleoside recognition HCN55_18825 PF01790 Prolipoprotein diacylglyceryl transferase HCN55_18830 PF07475 HPr Serine kinase C-terminal domain HCN55_18830 PF02603 HPr Serine kinase N terminus HCN55_18835 PF01979 Amidohydrolase family HCN55_18840 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase HCN55_18845 PF00392 Bacterial regulatory proteins, gntR family HCN55_18845 PF07702 UTRA domain HCN55_18850 PF00149 Calcineurin-like phosphoesterase HCN55_18855 PF01047 MarR family HCN55_18860 PF00067 Cytochrome P450 HCN55_18865 PF16715 Cyclodipeptide synthase HCN55_18870 PF01047 MarR family HCN55_18875 PF07690 Major Facilitator Superfamily HCN55_18880 PF04020 Mycobacterial 4 TMS phage holin, superfamily IV HCN55_18885 PF04024 PspC domain HCN55_18890 PF13349 Putative adhesin HCN55_18910 PF00005 ABC transporter HCN55_18910 PF17755 UvrA DNA-binding domain HCN55_18910 PF17760 UvrA interaction domain HCN55_18915 PF17757 UvrB interaction domain HCN55_18915 PF00271 Helicase conserved C-terminal domain HCN55_18915 PF04851 Type III restriction enzyme, res subunit HCN55_18915 PF12344 Ultra-violet resistance protein B HCN55_18915 PF02151 UvrB/uvrC motif HCN55_18920 PF09964 Uncharacterized protein conserved in bacteria (DUF2198) HCN55_18925 PF00391 PEP-utilising enzyme, mobile domain HCN55_18925 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain HCN55_18930 PF00440 Bacterial regulatory proteins, tetR family HCN55_18935 PF07690 Major Facilitator Superfamily HCN55_18940 PF17820 PDZ domain HCN55_18950 PF17820 PDZ domain HCN55_18950 PF03572 Peptidase family S41 HCN55_18950 PF01471 Putative peptidoglycan binding domain HCN55_18955 PF18075 FtsX extracellular domain HCN55_18955 PF02687 FtsX-like permease family HCN55_18960 PF00005 ABC transporter HCN55_18965 PF13442 Cytochrome C oxidase, cbb3-type, subunit III HCN55_18970 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) HCN55_18970 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 HCN55_18980 PF02810 SEC-C motif HCN55_18980 PF07517 SecA DEAD-like domain HCN55_18980 PF01043 SecA preprotein cross-linking domain HCN55_18980 PF07516 SecA Wing and Scaffold domain HCN55_18985 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein HCN55_18985 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus HCN55_19000 PF02561 Flagellar protein FliS HCN55_19005 PF07196 Flagellin hook IN motif HCN55_19005 PF07195 Flagellar hook-associated protein 2 C-terminus HCN55_19005 PF02465 Flagellar hook-associated protein 2 N-terminus HCN55_19010 PF03646 FlaG protein HCN55_19015 PF00700 Bacterial flagellin C-terminal helical region HCN55_19015 PF00669 Bacterial flagellin N-terminal helical region HCN55_19020 PF02599 Global regulator protein family HCN55_19025 PF02623 FliW protein HCN55_19040 PF06429 Flagellar basal body rod FlgEFG protein C-terminal HCN55_19040 PF00460 Flagella basal body rod protein HCN55_19045 PF05130 FlgN protein HCN55_19050 PF04316 Anti-sigma-28 factor, FlgM HCN55_19065 PF10719 Late competence development protein ComFB HCN55_19070 PF04851 Type III restriction enzyme, res subunit HCN55_19070 PF00271 Helicase conserved C-terminal domain HCN55_19075 PF02645 Uncharacterised protein, DegV family COG1307 HCN55_19080 PF00072 Response regulator receiver domain HCN55_19080 PF00196 Bacterial regulatory proteins, luxR family HCN55_19085 PF07730 Histidine kinase HCN55_19085 PF05384 Sensor protein DegS HCN55_19085 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HCN55_19090 PF09186 Domain of unknown function (DUF1949) HCN55_19090 PF01205 Uncharacterized protein family UPF0029 HCN55_19095 PF03816 Cell envelope-related transcriptional attenuator domain HCN55_19100 PF00953 Glycosyl transferase family 4 HCN55_19110 PF00535 Glycosyl transferase family 2 HCN55_19115 PF02706 Chain length determinant protein HCN55_19120 PF04932 O-Antigen ligase HCN55_19125 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain HCN55_19125 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain HCN55_19125 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain HCN55_19130 PF00534 Glycosyl transferases group 1 HCN55_19130 PF13439 Glycosyltransferase Family 4 HCN55_19135 PF01943 Polysaccharide biosynthesis protein HCN55_19135 PF14667 Polysaccharide biosynthesis C-terminal domain HCN55_19145 PF04122 Putative cell wall binding repeat 2 HCN55_19145 PF01520 N-acetylmuramoyl-L-alanine amidase HCN55_19150 PF08486 Stage II sporulation protein HCN55_19150 PF04122 Putative cell wall binding repeat 2 HCN55_19160 PF03816 Cell envelope-related transcriptional attenuator domain HCN55_19165 PF02350 UDP-N-acetylglucosamine 2-epimerase HCN55_19170 PF00483 Nucleotidyl transferase HCN55_19185 PF00535 Glycosyl transferase family 2 HCN55_19195 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase HCN55_19205 PF00483 Nucleotidyl transferase HCN55_19210 PF00005 ABC transporter HCN55_19215 PF01061 ABC-2 type transporter HCN55_19220 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase HCN55_19225 PF09318 Glycosyl transferase 1 domain A HCN55_19225 PF00534 Glycosyl transferases group 1 HCN55_19230 PF01467 Cytidylyltransferase-like HCN55_19235 PF03808 Glycosyl transferase WecB/TagA/CpsF family HCN55_19240 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase HCN55_19250 PF08239 Bacterial SH3 domain HCN55_19250 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase HCN55_19250 PF05036 Sporulation related domain HCN55_19255 PF01238 Phosphomannose isomerase type I HCN55_19260 PF03323 Bacillus/Clostridium GerA spore germination protein HCN55_19265 PF03845 Spore germination protein HCN55_19270 PF05504 Spore germination B3/ GerAC like, C-terminal HCN55_19275 PF00083 Sugar (and other) transporter HCN55_19280 PF03816 Cell envelope-related transcriptional attenuator domain HCN55_19290 PF00877 NlpC/P60 family HCN55_19300 PF09587 Bacterial capsule synthesis protein PGA_cap HCN55_19305 PF14102 Capsule biosynthesis CapC HCN55_19310 PF08245 Mur ligase middle domain HCN55_19315 PF00356 Bacterial regulatory proteins, lacI family HCN55_19320 PF00294 pfkB family carbohydrate kinase HCN55_19325 PF05025 RbsD / FucU transport protein family HCN55_19330 PF00005 ABC transporter HCN55_19335 PF02653 Branched-chain amino acid transport system / permease component HCN55_19340 PF13407 Periplasmic binding protein domain HCN55_19345 PF08239 Bacterial SH3 domain HCN55_19350 PF13031 Protein of unknown function (DUF3892) HCN55_19355 PF02525 Flavodoxin-like fold HCN55_19360 PF03306 Alpha-acetolactate decarboxylase HCN55_19365 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain HCN55_19365 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain HCN55_19365 PF00205 Thiamine pyrophosphate enzyme, central domain HCN55_19370 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HCN55_19370 PF03466 LysR substrate binding domain HCN55_19375 PF02040 Arsenical pump membrane protein HCN55_19390 PF08757 CotH kinase protein HCN55_19400 PF01613 Flavin reductase like domain HCN55_19405 PF13789 Domain of unknown function (DUF4181) HCN55_19415 PF01037 Lrp/AsnC ligand binding domain HCN55_19415 PF13404 AsnC-type helix-turn-helix domain HCN55_19420 PF02417 Chromate transporter HCN55_19425 PF02417 Chromate transporter HCN55_19435 PF03358 NADPH-dependent FMN reductase HCN55_19440 PF03466 LysR substrate binding domain HCN55_19440 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HCN55_19445 PF04493 Endonuclease V HCN55_19450 PF07661 MORN repeat variant HCN55_19455 PF14431 YwqJ-like deaminase HCN55_19455 PF04740 LXG domain of WXG superfamily HCN55_19455 PF14449 Pre-toxin TG HCN55_19465 PF16888 Domain of unknown function (DUF5082) HCN55_19475 PF09234 Domain of unknown function (DUF1963) HCN55_19480 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain HCN55_19480 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain HCN55_19480 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain HCN55_19490 PF13614 AAA domain HCN55_19495 PF13807 G-rich domain on putative tyrosine kinase HCN55_19495 PF02706 Chain length determinant protein HCN55_19505 PF04434 SWIM zinc finger HCN55_19510 PF12419 SNF2 Helicase protein HCN55_19510 PF00271 Helicase conserved C-terminal domain HCN55_19510 PF00176 SNF2 family N-terminal domain HCN55_19520 PF08220 DeoR-like helix-turn-helix domain HCN55_19520 PF00455 DeoR C terminal sensor domain HCN55_19525 PF00436 Single-strand binding protein family HCN55_19535 PF14183 YwpF-like protein HCN55_19540 PF04203 Sortase domain HCN55_19550 PF06580 Histidine kinase HCN55_19550 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HCN55_19555 PF01741 Large-conductance mechanosensitive channel, MscL HCN55_19560 PF07977 FabA-like domain HCN55_19565 PF18801 response regulator aspartate phosphatase H, N terminal HCN55_19570 PF00460 Flagella basal body rod protein HCN55_19570 PF06429 Flagellar basal body rod FlgEFG protein C-terminal HCN55_19575 PF06429 Flagellar basal body rod FlgEFG protein C-terminal HCN55_19575 PF00460 Flagella basal body rod protein HCN55_19585 PF12116 Stage III sporulation protein D HCN55_19595 PF01047 MarR family HCN55_19600 PF07690 Major Facilitator Superfamily HCN55_19605 PF13229 Right handed beta helix region HCN55_19610 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin HCN55_19615 PF07690 Major Facilitator Superfamily HCN55_19620 PF00857 Isochorismatase family HCN55_19630 PF00909 Ammonium Transporter Family HCN55_19635 PF00543 Nitrogen regulatory protein P-II HCN55_19640 PF01569 PAP2 superfamily HCN55_19645 PF04892 VanZ like family HCN55_19650 PF01551 Peptidase family M23 HCN55_19655 PF00583 Acetyltransferase (GNAT) family HCN55_19660 PF17319 Family of unknown function (DUF5362) HCN55_19670 PF17370 Family of unknown function (DUF5392) HCN55_19675 PF13396 Phospholipase_D-nuclease N-terminal HCN55_19675 PF13091 PLD-like domain HCN55_19680 PF07739 TipAS antibiotic-recognition domain HCN55_19680 PF13411 MerR HTH family regulatory protein HCN55_19685 PF17319 Family of unknown function (DUF5362) HCN55_19690 PF13460 NAD(P)H-binding HCN55_19695 PF02082 Transcriptional regulator HCN55_19700 PF01979 Amidohydrolase family HCN55_19700 PF00449 Urease alpha-subunit, N-terminal domain HCN55_19705 PF00699 Urease beta subunit HCN55_19710 PF00547 Urease, gamma subunit HCN55_19725 PF05532 CsbD-like HCN55_19735 PF18801 response regulator aspartate phosphatase H, N terminal HCN55_19735 PF17874 MalT-like TPR region HCN55_19740 PF06463 Molybdenum Cofactor Synthesis C HCN55_19740 PF04055 Radical SAM superfamily HCN55_19745 PF02634 FdhD/NarQ family HCN55_19755 PF00092 von Willebrand factor type A domain HCN55_19765 PF00092 von Willebrand factor type A domain HCN55_19770 PF08486 Stage II sporulation protein HCN55_19775 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) HCN55_19780 PF08680 TATA-box binding HCN55_19785 PF06612 Protein of unknown function (DUF1146) HCN55_19795 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain HCN55_19795 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain HCN55_19800 PF02874 ATP synthase alpha/beta family, beta-barrel domain HCN55_19800 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain HCN55_19805 PF00231 ATP synthase HCN55_19810 PF02874 ATP synthase alpha/beta family, beta-barrel domain HCN55_19810 PF00306 ATP synthase alpha/beta chain, C terminal domain HCN55_19810 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain HCN55_19815 PF00213 ATP synthase delta (OSCP) subunit HCN55_19820 PF00430 ATP synthase B/B' CF(0) HCN55_19825 PF00137 ATP synthase subunit C HCN55_19830 PF00119 ATP synthase A chain HCN55_19835 PF03899 ATP synthase I chain HCN55_19845 PF00464 Serine hydroxymethyltransferase HCN55_19850 PF04260 Protein of unknown function (DUF436) HCN55_19855 PF02502 Ribose/Galactose Isomerase HCN55_19860 PF01451 Low molecular weight phosphotyrosine protein phosphatase HCN55_19865 PF02659 Putative manganese efflux pump HCN55_19870 PF01300 Telomere recombination HCN55_19870 PF03481 Putative GTP-binding controlling metal-binding HCN55_19880 PF09551 Stage II sporulation protein R (spore_II_R) HCN55_19885 PF17094 Uncharacterised protein family (UPF0715) HCN55_19890 PF17247 Family of unknown function (DUF5316) HCN55_19895 PF05175 Methyltransferase small domain HCN55_19895 PF17827 PrmC N-terminal domain HCN55_19900 PF03462 PCRF domain HCN55_19900 PF00472 RF-1 domain HCN55_19905 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily HCN55_19910 PF13411 MerR HTH family regulatory protein HCN55_19915 PF03547 Membrane transport protein HCN55_19920 PF00390 Malic enzyme, N-terminal domain HCN55_19920 PF03949 Malic enzyme, NAD binding domain HCN55_19925 PF00265 Thymidine kinase HCN55_19930 PF01197 Ribosomal protein L31 HCN55_19935 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain HCN55_19935 PF07498 Rho termination factor, N-terminal domain HCN55_19935 PF07497 Rho termination factor, RNA-binding domain HCN55_19945 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded HCN55_19950 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) HCN55_19955 PF00923 Transaldolase/Fructose-6-phosphate aldolase HCN55_19960 PF01116 Fructose-bisphosphate aldolase class-II HCN55_19965 PF00072 Response regulator receiver domain HCN55_19970 PF10740 Domain of unknown function (DUF2529) HCN55_19975 PF06418 CTP synthase N-terminus HCN55_19975 PF00117 Glutamine amidotransferase class-I HCN55_19980 PF05066 HB1, ASXL, restriction endonuclease HTH domain HCN55_19985 PF00441 Acyl-CoA dehydrogenase, C-terminal domain HCN55_19985 PF02770 Acyl-CoA dehydrogenase, middle domain HCN55_19985 PF02771 Acyl-CoA dehydrogenase, N-terminal domain HCN55_19990 PF13183 4Fe-4S dicluster domain HCN55_19990 PF02754 Cysteine-rich domain HCN55_19995 PF13091 PLD-like domain HCN55_20000 PF03851 UV-endonuclease UvdE HCN55_20010 PF01872 RibD C-terminal domain HCN55_20015 PF00005 ABC transporter HCN55_20015 PF00664 ABC transporter transmembrane region HCN55_20020 PF13091 PLD-like domain HCN55_20020 PF13396 Phospholipase_D-nuclease N-terminal HCN55_20030 PF02665 Nitrate reductase gamma subunit HCN55_20035 PF02613 Nitrate reductase delta subunit HCN55_20040 PF13247 4Fe-4S dicluster domain HCN55_20040 PF14711 Respiratory nitrate reductase beta C-terminal HCN55_20045 PF00384 Molybdopterin oxidoreductase HCN55_20045 PF14710 Respiratory nitrate reductase alpha N-terminal HCN55_20045 PF01568 Molydopterin dinucleotide binding domain HCN55_20055 PF14256 YwiC-like protein HCN55_20060 PF00325 Bacterial regulatory proteins, crp family HCN55_20060 PF00027 Cyclic nucleotide-binding domain HCN55_20065 PF07690 Major Facilitator Superfamily HCN55_20070 PF05746 DALR anticodon binding domain HCN55_20070 PF00750 tRNA synthetases class I (R) HCN55_20070 PF03485 Arginyl tRNA synthetase N terminal domain HCN55_20075 PF09148 Domain of unknown function (DUF1934) HCN55_20080 PF11420 Bacteriocin subtilosin A HCN55_20090 PF04055 Radical SAM superfamily HCN55_20090 PF05402 Coenzyme PQQ synthesis protein D (PqqD) HCN55_20090 PF13186 Iron-sulfur cluster-binding domain HCN55_20100 PF00005 ABC transporter HCN55_20110 PF05193 Peptidase M16 inactive domain HCN55_20115 PF00675 Insulinase (Peptidase family M16) HCN55_20140 PF18801 response regulator aspartate phosphatase H, N terminal HCN55_20145 PF11131 Rap-phr extracellular signalling HCN55_20150 PF04073 Aminoacyl-tRNA editing domain HCN55_20155 PF00491 Arginase family HCN55_20160 PF17284 Spermidine synthase tetramerisation domain HCN55_20165 PF00905 Penicillin binding protein transpeptidase domain HCN55_20165 PF00912 Transglycosylase HCN55_20170 PF08741 YwhD family HCN55_20175 PF02163 Peptidase family M50 HCN55_20180 PF01361 Tautomerase enzyme HCN55_20185 PF01047 MarR family HCN55_20190 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain HCN55_20190 PF03129 Anticodon binding domain HCN55_20190 PF02824 TGS domain HCN55_20190 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) HCN55_20195 PF07690 Major Facilitator Superfamily HCN55_20200 PF02082 Transcriptional regulator HCN55_20210 PF01966 HD domain HCN55_20215 PF07293 Protein of unknown function (DUF1450) HCN55_20225 PF00892 EamA-like transporter family HCN55_20230 PF03099 Biotin/lipoate A/B protein ligase family HCN55_20235 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HCN55_20235 PF03466 LysR substrate binding domain HCN55_20240 PF01515 Phosphate acetyl/butaryl transferase HCN55_20255 PF00155 Aminotransferase class I and II HCN55_20260 PF07690 Major Facilitator Superfamily HCN55_20275 PF07883 Cupin domain HCN55_20285 PF07690 Major Facilitator Superfamily HCN55_20290 PF00324 Amino acid permease HCN55_20295 PF01546 Peptidase family M20/M25/M40 HCN55_20300 PF00171 Aldehyde dehydrogenase family HCN55_20305 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain HCN55_20305 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase HCN55_20310 PF17735 Biofilm surface layer A HCN55_20315 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase HCN55_20320 PF04321 RmlD substrate binding domain HCN55_20325 PF16363 GDP-mannose 4,6 dehydratase HCN55_20330 PF00483 Nucleotidyl transferase HCN55_20335 PF04101 Glycosyltransferase family 28 C-terminal domain HCN55_20340 PF02348 Cytidylyltransferase HCN55_20345 PF03102 NeuB family HCN55_20345 PF08666 SAF domain HCN55_20350 PF00583 Acetyltransferase (GNAT) family HCN55_20355 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family HCN55_20360 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase HCN55_20365 PF00535 Glycosyl transferase family 2 HCN55_20370 PF09671 Spore coat protein (Spore_GerQ) HCN55_20375 PF04241 Protein of unknown function (DUF423) HCN55_20380 PF00860 Permease family HCN55_20385 PF17261 Family of unknown function (DUF5327) HCN55_20390 PF00171 Aldehyde dehydrogenase family HCN55_20395 PF03167 Uracil DNA glycosylase superfamily HCN55_20400 PF00535 Glycosyl transferase family 2 HCN55_20415 PF03551 Transcriptional regulator PadR-like family HCN55_20420 PF08543 Phosphomethylpyrimidine kinase HCN55_20430 PF08244 Glycosyl hydrolases family 32 C terminal HCN55_20430 PF00251 Glycosyl hydrolases family 32 N-terminal domain HCN55_20435 PF02378 Phosphotransferase system, EIIC HCN55_20435 PF00367 phosphotransferase system, EIIB HCN55_20440 PF01226 Formate/nitrite transporter HCN55_20445 PF00874 PRD domain HCN55_20445 PF03123 CAT RNA binding domain HCN55_20455 PF00082 Subtilase family HCN55_20455 PF13860 FlgD Ig-like domain HCN55_20455 PF02225 PA domain HCN55_20455 PF05922 Peptidase inhibitor I9 HCN55_20460 PF00296 Luciferase-like monooxygenase HCN55_20465 PF00881 Nitroreductase family HCN55_20470 PF01098 Cell cycle protein HCN55_20475 PF17368 Spore morphogenesis and germination YwcE HCN55_20480 PF03626 Prokaryotic Cytochrome C oxidase subunit IV HCN55_20485 PF00510 Cytochrome c oxidase subunit III HCN55_20490 PF00115 Cytochrome C and Quinol oxidase polypeptide I HCN55_20495 PF00116 Cytochrome C oxidase subunit II, periplasmic domain HCN55_20495 PF02790 Cytochrome C oxidase subunit II, transmembrane domain HCN55_20500 PF04226 Transglycosylase associated protein HCN55_20505 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain HCN55_20505 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain HCN55_20510 PF10509 Galactokinase galactose-binding signature HCN55_20510 PF00288 GHMP kinases N terminal domain HCN55_20510 PF08544 GHMP kinases C terminal HCN55_20515 PF04138 GtrA-like protein HCN55_20520 PF00440 Bacterial regulatory proteins, tetR family HCN55_20525 PF08671 Anti-repressor SinI HCN55_20530 PF04341 Protein of unknown function, DUF485 HCN55_20535 PF00474 Sodium:solute symporter family HCN55_20540 PF01323 DSBA-like thioredoxin domain HCN55_20545 PF10518 TAT (twin-arginine translocation) pathway signal sequence HCN55_20545 PF04261 Dyp-type peroxidase family HCN55_20550 PF09375 Imelysin HCN55_20555 PF03239 Iron permease FTR1 family HCN55_20560 PF02581 Thiamine monophosphate synthase HCN55_20565 PF02110 Hydroxyethylthiazole kinase family HCN55_20570 PF03466 LysR substrate binding domain HCN55_20570 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HCN55_20575 PF03788 LrgA family HCN55_20580 PF04172 LrgB-like family HCN55_20585 PF12832 MFS_1 like family HCN55_20590 PF09962 Uncharacterized conserved protein (DUF2196) HCN55_20595 PF10672 S-adenosylmethionine-dependent methyltransferase HCN55_20595 PF17785 PUA-like domain HCN55_20600 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily HCN55_20605 PF10924 Protein of unknown function (DUF2711) HCN55_20610 PF02378 Phosphotransferase system, EIIC HCN55_20615 PF00082 Subtilase family HCN55_20620 PF00367 phosphotransferase system, EIIB HCN55_20620 PF02378 Phosphotransferase system, EIIC HCN55_20625 PF00874 PRD domain HCN55_20625 PF03123 CAT RNA binding domain HCN55_20630 PF01501 Glycosyl transferase family 8 HCN55_20635 PF09529 Integral membrane protein (intg_mem_TP0381) HCN55_20640 PF01047 MarR family HCN55_20645 PF00579 tRNA synthetases class I (W and Y) HCN55_20645 PF01479 S4 domain HCN55_20650 PF02225 PA domain HCN55_20650 PF04389 Peptidase family M28 HCN55_20655 PF04607 Region found in RelA / SpoT proteins HCN55_20660 PF01040 UbiA prenyltransferase family HCN55_20670 PF12459 D-Ala-teichoic acid biosynthesis protein HCN55_20675 PF00501 AMP-binding enzyme HCN55_20675 PF13193 AMP-binding enzyme C-terminal domain HCN55_20680 PF03062 MBOAT, membrane-bound O-acyltransferase family HCN55_20685 PF00550 Phosphopantetheine attachment site HCN55_20690 PF04914 DltD protein HCN55_20695 PF00106 short chain dehydrogenase HCN55_20700 PF01063 Amino-transferase class IV HCN55_20705 PF11975 Family 4 glycosyl hydrolase C-terminal domain HCN55_20705 PF02056 Family 4 glycosyl hydrolase HCN55_20710 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit HCN55_20715 PF02378 Phosphotransferase system, EIIC HCN55_20720 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit HCN55_20725 PF08279 HTH domain HCN55_20725 PF05043 Mga helix-turn-helix domain HCN55_20725 PF00874 PRD domain HCN55_20725 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 HCN55_20735 PF02245 Methylpurine-DNA glycosylase (MPG) HCN55_20740 PF06628 Catalase-related immune-responsive HCN55_20740 PF00199 Catalase HCN55_20745 PF07690 Major Facilitator Superfamily HCN55_20750 PF12679 ABC-2 family transporter protein HCN55_20755 PF00005 ABC transporter HCN55_20755 PF13732 Domain of unknown function (DUF4162) HCN55_20760 PF13396 Phospholipase_D-nuclease N-terminal HCN55_20770 PF17280 Family of unknown function (DUF5345) HCN55_20775 PF04542 Sigma-70 region 2 HCN55_20775 PF08281 Sigma-70, region 4 HCN55_20780 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin HCN55_20785 PF01256 Carbohydrate kinase HCN55_20790 PF00005 ABC transporter HCN55_20790 PF00664 ABC transporter transmembrane region HCN55_20795 PF00664 ABC transporter transmembrane region HCN55_20795 PF00005 ABC transporter HCN55_20800 PF02322 Cytochrome bd terminal oxidase subunit II HCN55_20805 PF01654 Cytochrome bd terminal oxidase subunit I HCN55_20810 PF03390 2-hydroxycarboxylate transporter family HCN55_20815 PF01435 Peptidase family M48 HCN55_20825 PF01522 Polysaccharide deacetylase HCN55_20830 PF03459 TOBE domain HCN55_20830 PF00005 ABC transporter HCN55_20830 PF17912 MalK OB fold domain HCN55_20835 PF13556 PucR C-terminal helix-turn-helix domain HCN55_20840 PF00171 Aldehyde dehydrogenase family HCN55_20845 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) HCN55_20845 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 HCN55_20850 PF11611 Domain of unknown function (DUF4352) HCN55_20855 PF16363 GDP-mannose 4,6 dehydratase HCN55_20860 PF01161 Phosphatidylethanolamine-binding protein HCN55_20865 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HCN55_20865 PF03466 LysR substrate binding domain HCN55_20875 PF07730 Histidine kinase HCN55_20880 PF00196 Bacterial regulatory proteins, luxR family HCN55_20880 PF00072 Response regulator receiver domain HCN55_20885 PF07687 Peptidase dimerisation domain HCN55_20885 PF01546 Peptidase family M20/M25/M40 HCN55_20895 PF04525 LURP-one-related HCN55_20900 PF01717 Cobalamin-independent synthase, Catalytic domain HCN55_20905 PF01717 Cobalamin-independent synthase, Catalytic domain HCN55_20915 PF01144 Coenzyme A transferase HCN55_20920 PF01144 Coenzyme A transferase HCN55_20930 PF08241 Methyltransferase domain HCN55_20935 PF01773 Na+ dependent nucleoside transporter N-terminus HCN55_20935 PF07662 Na+ dependent nucleoside transporter C-terminus HCN55_20950 PF18011 C-terminal domain found in long catalases HCN55_20950 PF06628 Catalase-related immune-responsive HCN55_20950 PF00199 Catalase HCN55_20955 PF03600 Citrate transporter HCN55_20960 PF00722 Glycosyl hydrolases family 16 HCN55_20965 PF00874 PRD domain HCN55_20965 PF03123 CAT RNA binding domain HCN55_20975 PF11700 Vacuole effluxer Atg22 like HCN55_20980 PF00270 DEAD/DEAH box helicase HCN55_20980 PF03880 DbpA RNA binding domain HCN55_20980 PF00271 Helicase conserved C-terminal domain HCN55_20985 PF13472 GDSL-like Lipase/Acylhydrolase family HCN55_21000 PF14176 YxiJ-like protein HCN55_21005 PF10898 Protein of unknown function (DUF2716) HCN55_21040 PF05593 RHS Repeat HCN55_21045 PF00892 EamA-like transporter family HCN55_21050 PF00582 Universal stress protein family HCN55_21055 PF00232 Glycosyl hydrolase family 1 HCN55_21060 PF00367 phosphotransferase system, EIIB HCN55_21060 PF02378 Phosphotransferase system, EIIC HCN55_21060 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 HCN55_21065 PF18593 CdiI immunity protein HCN55_21075 PF04740 LXG domain of WXG superfamily HCN55_21075 PF14449 Pre-toxin TG HCN55_21085 PF16888 Domain of unknown function (DUF5082) HCN55_21090 PF16369 C-terminal lipocalin-like domain HCN55_21090 PF04616 Glycosyl hydrolases family 43 HCN55_21100 PF09021 HutP HCN55_21105 PF00221 Aromatic amino acid lyase HCN55_21110 PF17392 Urocanase C-terminal domain HCN55_21110 PF01175 Urocanase Rossmann-like domain HCN55_21110 PF17391 Urocanase N-terminal domain HCN55_21115 PF01979 Amidohydrolase family HCN55_21120 PF00491 Arginase family HCN55_21125 PF00324 Amino acid permease HCN55_21130 PF00591 Glycosyl transferase family, a/b domain HCN55_21130 PF02885 Glycosyl transferase family, helical bundle domain HCN55_21130 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain HCN55_21135 PF01773 Na+ dependent nucleoside transporter N-terminus HCN55_21135 PF07662 Na+ dependent nucleoside transporter C-terminus HCN55_21140 PF01791 DeoC/LacD family aldolase HCN55_21145 PF04198 Putative sugar-binding domain HCN55_21150 PF06724 Domain of Unknown Function (DUF1206) HCN55_21155 PF04346 Ethanolamine utilisation protein, EutH HCN55_21160 PF03972 MmgE/PrpD family HCN55_21165 PF07687 Peptidase dimerisation domain HCN55_21165 PF01546 Peptidase family M20/M25/M40 HCN55_21170 PF00005 ABC transporter HCN55_21175 PF00528 Binding-protein-dependent transport system inner membrane component HCN55_21180 PF00497 Bacterial extracellular solute-binding proteins, family 3 HCN55_21185 PF00583 Acetyltransferase (GNAT) family HCN55_21190 PF00296 Luciferase-like monooxygenase HCN55_21200 PF02275 Linear amide C-N hydrolases, choloylglycine hydrolase family HCN55_21215 PF11631 Protein of unknown function (DUF3255) HCN55_21235 PF01497 Periplasmic binding protein HCN55_21240 PF06486 Protein of unknown function (DUF1093) HCN55_21245 PF02687 FtsX-like permease family HCN55_21250 PF00005 ABC transporter HCN55_21255 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HCN55_21260 PF00486 Transcriptional regulatory protein, C terminal HCN55_21260 PF00072 Response regulator receiver domain HCN55_21265 PF01116 Fructose-bisphosphate aldolase class-II HCN55_21270 PF01261 Xylose isomerase-like TIM barrel HCN55_21275 PF01261 Xylose isomerase-like TIM barrel HCN55_21280 PF01408 Oxidoreductase family, NAD-binding Rossmann fold HCN55_21280 PF02894 Oxidoreductase family, C-terminal alpha/beta domain HCN55_21285 PF07690 Major Facilitator Superfamily HCN55_21290 PF01261 Xylose isomerase-like TIM barrel HCN55_21295 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain HCN55_21295 PF00205 Thiamine pyrophosphate enzyme, central domain HCN55_21295 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain HCN55_21300 PF00294 pfkB family carbohydrate kinase HCN55_21305 PF04962 KduI/IolB family HCN55_21310 PF00171 Aldehyde dehydrogenase family HCN55_21315 PF08220 DeoR-like helix-turn-helix domain HCN55_21315 PF00455 DeoR C terminal sensor domain HCN55_21320 PF00248 Aldo/keto reductase family HCN55_21330 PF10850 Protein of unknown function (DUF2653) HCN55_21335 PF00083 Sugar (and other) transporter HCN55_21340 PF00183 Hsp90 protein HCN55_21355 PF00440 Bacterial regulatory proteins, tetR family HCN55_21360 PF00171 Aldehyde dehydrogenase family HCN55_21365 PF00583 Acetyltransferase (GNAT) family HCN55_21370 PF08007 Cupin superfamily protein HCN55_21375 PF08241 Methyltransferase domain HCN55_21380 PF05402 Coenzyme PQQ synthesis protein D (PqqD) HCN55_21390 PF00733 Asparagine synthase HCN55_21390 PF13537 Glutamine amidotransferase domain HCN55_21395 PF07690 Major Facilitator Superfamily HCN55_21400 PF01011 PQQ enzyme repeat HCN55_21400 PF13570 PQQ-like domain HCN55_21400 PF13360 PQQ-like domain HCN55_21405 PF17369 Family of unknown function (DUF5391) HCN55_21410 PF06271 RDD family HCN55_21415 PF04235 Protein of unknown function (DUF418) HCN55_21420 PF07883 Cupin domain HCN55_21425 PF00440 Bacterial regulatory proteins, tetR family HCN55_21430 PF00106 short chain dehydrogenase HCN55_21435 PF01047 MarR family HCN55_21440 PF03788 LrgA family HCN55_21445 PF04172 LrgB-like family HCN55_21450 PF04230 Polysaccharide pyruvyl transferase HCN55_21455 PF02595 Glycerate kinase family HCN55_21460 PF07729 FCD domain HCN55_21460 PF00392 Bacterial regulatory proteins, gntR family HCN55_21465 PF00370 FGGY family of carbohydrate kinases, N-terminal domain HCN55_21465 PF02782 FGGY family of carbohydrate kinases, C-terminal domain HCN55_21470 PF02447 GntP family permease HCN55_21475 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain HCN55_21475 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase HCN55_21480 PF00578 AhpC/TSA family HCN55_21485 PF13192 Thioredoxin domain HCN55_21485 PF07992 Pyridine nucleotide-disulphide oxidoreductase HCN55_21490 PF00232 Glycosyl hydrolase family 1 HCN55_21495 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 HCN55_21505 PF00392 Bacterial regulatory proteins, gntR family HCN55_21505 PF07702 UTRA domain HCN55_21520 PF00005 ABC transporter HCN55_21530 PF04055 Radical SAM superfamily HCN55_21540 PF06874 Firmicute fructose-1,6-bisphosphatase HCN55_21545 PF13476 AAA domain HCN55_21545 PF10088 Uncharacterised protein conserved in bacteria (DUF2326) HCN55_21555 PF00149 Calcineurin-like phosphoesterase HCN55_21560 PF02590 Predicted SPOUT methyltransferase HCN55_21565 PF14116 YyzF-like protein HCN55_21575 PF08240 Alcohol dehydrogenase GroES-like domain HCN55_21575 PF00107 Zinc-binding dehydrogenase HCN55_21585 PF10852 Protein of unknown function (DUF2651) HCN55_21600 PF00583 Acetyltransferase (GNAT) family HCN55_21605 PF18801 response regulator aspartate phosphatase H, N terminal HCN55_21615 PF00491 Arginase family HCN55_21620 PF00324 Amino acid permease HCN55_21625 PF00202 Aminotransferase class-III HCN55_21630 PF13426 PAS domain HCN55_21630 PF02954 Bacterial regulatory protein, Fis family HCN55_21630 PF00158 Sigma-54 interaction domain HCN55_21650 PF13180 PDZ domain HCN55_21655 PF00753 Metallo-beta-lactamase superfamily HCN55_21660 PF09648 YycH protein HCN55_21665 PF07435 YycH protein HCN55_21670 PF00512 His Kinase A (phospho-acceptor) domain HCN55_21670 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HCN55_21670 PF00672 HAMP domain HCN55_21670 PF13426 PAS domain HCN55_21675 PF00486 Transcriptional regulatory protein, C terminal HCN55_21675 PF00072 Response regulator receiver domain HCN55_21700 PF00709 Adenylosuccinate synthetase HCN55_21705 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily HCN55_21710 PF00772 DnaB-like helicase N terminal domain HCN55_21710 PF03796 DnaB-like helicase C terminal domain HCN55_21715 PF09954 Uncharacterized protein conserved in bacteria (DUF2188) HCN55_21725 PF14174 YycC-like protein HCN55_21730 PF07690 Major Facilitator Superfamily HCN55_21735 PF13231 Dolichyl-phosphate-mannose-protein mannosyltransferase HCN55_21740 PF03948 Ribosomal protein L9, C-terminal domain HCN55_21740 PF01281 Ribosomal protein L9, N-terminal domain HCN55_21745 PF02272 DHHA1 domain HCN55_21745 PF01368 DHH family HCN55_21750 PF09991 Predicted membrane protein (DUF2232) HCN55_21760 PF07875 Coat F domain HCN55_21765 PF01638 HxlR-like helix-turn-helix HCN55_21770 PF02833 DHHA2 domain HCN55_21770 PF01368 DHH family HCN55_21785 PF07690 Major Facilitator Superfamily HCN55_21800 PF10916 Protein of unknown function (DUF2712) HCN55_21805 PF10920 Protein of unknown function (DUF2705) HCN55_21815 PF10920 Protein of unknown function (DUF2705) HCN55_21820 PF00005 ABC transporter HCN55_21835 PF13474 SnoaL-like domain HCN55_21840 PF00805 Pentapeptide repeats (8 copies) HCN55_21845 PF07690 Major Facilitator Superfamily HCN55_21850 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HCN55_21850 PF03466 LysR substrate binding domain HCN55_21855 PF13673 Acetyltransferase (GNAT) domain HCN55_21870 PF00753 Metallo-beta-lactamase superfamily HCN55_21875 PF01047 MarR family HCN55_21880 PF13673 Acetyltransferase (GNAT) domain HCN55_21890 PF00583 Acetyltransferase (GNAT) family HCN55_21895 PF04237 YjbR HCN55_21900 PF01872 RibD C-terminal domain HCN55_21910 PF07690 Major Facilitator Superfamily HCN55_21915 PF08050 Tetracycline resistance leader peptide HCN55_21920 PF03190 Protein of unknown function, DUF255 HCN55_21925 PF13411 MerR HTH family regulatory protein HCN55_21930 PF00892 EamA-like transporter family HCN55_21935 PF03190 Protein of unknown function, DUF255 HCN55_21940 PF02517 CPBP intramembrane metalloprotease HCN55_21945 PF00083 Sugar (and other) transporter HCN55_21950 PF14602 Hexapeptide repeat of succinyl-transferase HCN55_21950 PF12464 Maltose acetyltransferase HCN55_21955 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily HCN55_21960 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family HCN55_21960 PF00356 Bacterial regulatory proteins, lacI family HCN55_21965 PF03372 Endonuclease/Exonuclease/phosphatase family HCN55_21970 PF01084 Ribosomal protein S18 HCN55_21975 PF00436 Single-strand binding protein family HCN55_21980 PF01250 Ribosomal protein S6 HCN55_21985 PF06071 Protein of unknown function (DUF933) HCN55_21985 PF01926 50S ribosome-binding GTPase HCN55_21990 PF04879 Molybdopterin oxidoreductase Fe4S4 domain HCN55_21990 PF00384 Molybdopterin oxidoreductase HCN55_21990 PF01568 Molydopterin dinucleotide binding domain HCN55_21995 PF06107 Bacterial protein of unknown function (DUF951) HCN55_22005 PF06866 Protein of unknown function (DUF1256) HCN55_22010 PF02195 ParB-like nuclease domain HCN55_22010 PF17762 HTH domain found in ParB protein HCN55_22015 PF13614 AAA domain HCN55_22020 PF06713 Bacterial PH domain HCN55_22025 PF17762 HTH domain found in ParB protein HCN55_22025 PF02195 ParB-like nuclease domain HCN55_22030 PF02527 rRNA small subunit methyltransferase G HCN55_22035 PF13932 GidA associated domain HCN55_22035 PF01134 Glucose inhibited division protein A HCN55_22040 PF12631 MnmE helical domain HCN55_22040 PF01926 50S ribosome-binding GTPase HCN55_22040 PF10396 GTP-binding protein TrmE N-terminus HCN55_22045 PF14804 Jag N-terminus HCN55_22045 PF01424 R3H domain HCN55_22050 PF02096 60Kd inner membrane protein HCN55_22055 PF00825 Ribonuclease P HCN55_22060 PF00468 Ribosomal protein L34