locus-tag class description CQJ30_00005 PF00308 Bacterial dnaA protein CQJ30_00005 PF08299 Bacterial dnaA protein helix-turn-helix CQJ30_00005 PF11638 DnaA N-terminal domain CQJ30_00010 PF00712 DNA polymerase III beta subunit, N-terminal domain CQJ30_00010 PF02768 DNA polymerase III beta subunit, C-terminal domain CQJ30_00010 PF02767 DNA polymerase III beta subunit, central domain CQJ30_00020 PF02463 RecF/RecN/SMC N terminal domain CQJ30_00025 PF00986 DNA gyrase B subunit, carboxyl terminus CQJ30_00025 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CQJ30_00025 PF01751 Toprim domain CQJ30_00025 PF00204 DNA gyrase B CQJ30_00030 PF03989 DNA gyrase C-terminal domain, beta-propeller CQJ30_00030 PF00521 DNA gyrase/topoisomerase IV, subunit A CQJ30_00045 PF00072 Response regulator receiver domain CQJ30_00075 PF14175 YaaC-like Protein CQJ30_00080 PF00571 CBS domain CQJ30_00080 PF00478 IMP dehydrogenase / GMP reductase domain CQJ30_00085 PF00768 D-alanyl-D-alanine carboxypeptidase CQJ30_00085 PF07943 Penicillin-binding protein 5, C-terminal domain CQJ30_00105 PF01712 Deoxynucleoside kinase CQJ30_00110 PF00704 Glycosyl hydrolases family 18 CQJ30_00110 PF01476 LysM domain CQJ30_00115 PF14437 MafB19-like deaminase CQJ30_00125 PF12169 DNA polymerase III subunits gamma and tau domain III CQJ30_00130 PF02575 YbaB/EbfC DNA-binding family CQJ30_00135 PF02132 RecR protein CQJ30_00135 PF13662 Toprim domain CQJ30_00160 PF10764 Inhibitor of sigma-G Gin CQJ30_00165 PF02223 Thymidylate kinase CQJ30_00170 PF06153 Cyclic-di-AMP receptor CQJ30_00175 PF03885 Protein of unknown function (DUF327) CQJ30_00180 PF09115 DNA polymerase III, delta subunit, C terminal CQJ30_00185 PF04468 PSP1 C-terminal conserved region CQJ30_00190 PF06156 Initiation control protein YabA CQJ30_00195 PF05175 Methyltransferase small domain CQJ30_00200 PF01541 GIY-YIG catalytic domain CQJ30_00205 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CQJ30_00210 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin CQJ30_00210 PF18277 AbrB C-terminal domain CQJ30_00220 PF01588 Putative tRNA binding domain CQJ30_00220 PF09334 tRNA synthetases class I (M) CQJ30_00220 PF08264 Anticodon-binding domain of tRNA CQJ30_00235 PF01026 TatD related DNase CQJ30_00240 PF06725 3D domain CQJ30_00240 PF03990 G5-linked-Ubiquitin-like domain CQJ30_00240 PF07501 G5 domain CQJ30_00245 PF13331 Domain of unknown function (DUF4093) CQJ30_00245 PF13662 Toprim domain CQJ30_00250 PF00398 Ribosomal RNA adenine dimethylase CQJ30_00255 PF05582 YabG peptidase U57 CQJ30_00260 PF06257 Biofilm formation stimulator VEG CQJ30_00265 PF00269 Small, acid-soluble spore proteins, alpha/beta type CQJ30_00270 PF00288 GHMP kinases N terminal domain CQJ30_00270 PF08544 GHMP kinases C terminal CQJ30_00275 PF00156 Phosphoribosyl transferase domain CQJ30_00275 PF09182 Bacterial purine repressor, N-terminal CQJ30_00280 PF04026 SpoVG CQJ30_00285 PF00132 Bacterial transferase hexapeptide (six repeats) CQJ30_00285 PF00483 Nucleotidyl transferase CQJ30_00290 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase CQJ30_00290 PF14572 Phosphoribosyl synthetase-associated domain CQJ30_00295 PF01386 Ribosomal L25p family CQJ30_00295 PF14693 Ribosomal protein TL5, C-terminal domain CQJ30_00300 PF01195 Peptidyl-tRNA hydrolase CQJ30_00305 PF10955 Protein of unknown function (DUF2757) CQJ30_00310 PF00270 DEAD/DEAH box helicase CQJ30_00310 PF03461 TRCF domain CQJ30_00310 PF00271 Helicase conserved C-terminal domain CQJ30_00310 PF02559 CarD-like/TRCF domain CQJ30_00310 PF17757 UvrB interaction domain CQJ30_00315 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin CQJ30_00315 PF15714 Stage V sporulation protein T C-terminal, transcription factor CQJ30_00320 PF14667 Polysaccharide biosynthesis C-terminal domain CQJ30_00320 PF01943 Polysaccharide biosynthesis protein CQJ30_00325 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CQJ30_00325 PF03819 MazG nucleotide pyrophosphohydrolase domain CQJ30_00330 PF01479 S4 domain CQJ30_00335 PF07873 YabP family CQJ30_00340 PF09578 Spore cortex protein YabQ (Spore_YabQ) CQJ30_00350 PF00575 S1 RNA binding domain CQJ30_00355 PF07228 Stage II sporulation protein E (SpoIIE) CQJ30_00365 PF07228 Stage II sporulation protein E (SpoIIE) CQJ30_00370 PF00092 von Willebrand factor type A domain CQJ30_00375 PF00069 Protein kinase domain CQJ30_00380 PF09179 TilS substrate binding domain CQJ30_00380 PF01171 PP-loop family CQJ30_00380 PF11734 TilS substrate C-terminal domain CQJ30_00390 PF01434 Peptidase family M41 CQJ30_00390 PF00004 ATPase family associated with various cellular activities (AAA) CQJ30_00390 PF17862 AAA+ lid domain CQJ30_00390 PF06480 FtsH Extracellular CQJ30_00395 PF03309 Type III pantothenate kinase CQJ30_00400 PF01430 Hsp33 protein CQJ30_00405 PF00291 Pyridoxal-phosphate dependent enzyme CQJ30_00410 PF00809 Pterin binding enzyme CQJ30_00415 PF02152 Dihydroneopterin aldolase CQJ30_00420 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) CQJ30_00425 PF01381 Helix-turn-helix CQJ30_00430 PF01336 OB-fold nucleic acid binding domain CQJ30_00430 PF00152 tRNA synthetases class II (D, K and N) CQJ30_00435 PF00356 Bacterial regulatory proteins, lacI family CQJ30_00440 PF00128 Alpha amylase, catalytic domain CQJ30_00440 PF02903 Alpha amylase, N-terminal ig-like domain CQJ30_00445 PF13416 Bacterial extracellular solute-binding protein CQJ30_00450 PF00528 Binding-protein-dependent transport system inner membrane component CQJ30_00455 PF00528 Binding-protein-dependent transport system inner membrane component CQJ30_00460 PF06691 Protein of unknown function (DUF1189) CQJ30_00465 PF03633 Glycosyl hydrolase family 65, C-terminal domain CQJ30_00465 PF03636 Glycosyl hydrolase family 65, N-terminal domain CQJ30_00465 PF03632 Glycosyl hydrolase family 65 central catalytic domain CQJ30_00470 PF16657 Maltogenic Amylase, C-terminal domain CQJ30_00470 PF00128 Alpha amylase, catalytic domain CQJ30_00545 PF05848 CtsR N-terminal HTH domain CQJ30_00545 PF17727 CtsR C-terminal dimerization domain CQJ30_00550 PF02151 UvrB/uvrC motif CQJ30_00555 PF00217 ATP:guanido phosphotransferase, C-terminal catalytic domain CQJ30_00560 PF10431 C-terminal, D2-small domain, of ClpB protein CQJ30_00560 PF00004 ATPase family associated with various cellular activities (AAA) CQJ30_00560 PF07724 AAA domain (Cdc48 subfamily) CQJ30_00560 PF02861 Clp amino terminal domain, pathogenicity island component CQJ30_00560 PF17871 AAA lid domain CQJ30_00565 PF18073 Rubredoxin metal binding domain CQJ30_00575 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase CQJ30_00580 PF02542 YgbB family CQJ30_00585 PF00749 tRNA synthetases class I (E and Q), catalytic domain CQJ30_00590 PF06426 Serine acetyltransferase, N-terminal CQJ30_00590 PF00132 Bacterial transferase hexapeptide (six repeats) CQJ30_00595 PF09190 DALR domain CQJ30_00595 PF01406 tRNA synthetases class I (C) catalytic domain CQJ30_00600 PF00636 Ribonuclease III domain CQJ30_00605 PF08032 RNA 2'-O ribose methyltransferase substrate binding CQJ30_00605 PF00588 SpoU rRNA Methylase family CQJ30_00610 PF05991 YacP-like NYN domain CQJ30_00615 PF08281 Sigma-70, region 4 CQJ30_00615 PF04542 Sigma-70 region 2 CQJ30_00620 PF00471 Ribosomal protein L33 CQJ30_00625 PF00584 SecE/Sec61-gamma subunits of protein translocation complex CQJ30_00630 PF00467 KOW motif CQJ30_00630 PF02357 Transcription termination factor nusG CQJ30_00635 PF03946 Ribosomal protein L11, N-terminal domain CQJ30_00635 PF00298 Ribosomal protein L11, RNA binding domain CQJ30_00640 PF00687 Ribosomal protein L1p/L10e family CQJ30_00645 PF00466 Ribosomal protein L10 CQJ30_00650 PF00542 Ribosomal protein L7/L12 C-terminal domain CQJ30_00650 PF16320 Ribosomal protein L7/L12 dimerisation domain CQJ30_00655 PF05175 Methyltransferase small domain CQJ30_00660 PF04561 RNA polymerase Rpb2, domain 2 CQJ30_00660 PF04565 RNA polymerase Rpb2, domain 3 CQJ30_00660 PF04563 RNA polymerase beta subunit CQJ30_00660 PF10385 RNA polymerase beta subunit external 1 domain CQJ30_00660 PF00562 RNA polymerase Rpb2, domain 6 CQJ30_00660 PF04560 RNA polymerase Rpb2, domain 7 CQJ30_00665 PF04983 RNA polymerase Rpb1, domain 3 CQJ30_00665 PF04998 RNA polymerase Rpb1, domain 5 CQJ30_00665 PF04997 RNA polymerase Rpb1, domain 1 CQJ30_00665 PF00623 RNA polymerase Rpb1, domain 2 CQJ30_00665 PF05000 RNA polymerase Rpb1, domain 4 CQJ30_00670 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family CQJ30_00675 PF00164 Ribosomal protein S12/S23 CQJ30_00680 PF00177 Ribosomal protein S7p/S5e CQJ30_00685 PF00009 Elongation factor Tu GTP binding domain CQJ30_00685 PF03764 Elongation factor G, domain IV CQJ30_00685 PF03144 Elongation factor Tu domain 2 CQJ30_00685 PF00679 Elongation factor G C-terminus CQJ30_00685 PF14492 Elongation Factor G, domain II CQJ30_00690 PF03143 Elongation factor Tu C-terminal domain CQJ30_00690 PF00009 Elongation factor Tu GTP binding domain CQJ30_00690 PF03144 Elongation factor Tu domain 2 CQJ30_00695 PF00338 Ribosomal protein S10p/S20e CQJ30_00700 PF00297 Ribosomal protein L3 CQJ30_00705 PF00573 Ribosomal protein L4/L1 family CQJ30_00710 PF00276 Ribosomal protein L23 CQJ30_00715 PF00181 Ribosomal Proteins L2, RNA binding domain CQJ30_00715 PF03947 Ribosomal Proteins L2, C-terminal domain CQJ30_00720 PF00203 Ribosomal protein S19 CQJ30_00725 PF00237 Ribosomal protein L22p/L17e CQJ30_00730 PF07650 KH domain CQJ30_00730 PF00189 Ribosomal protein S3, C-terminal domain CQJ30_00735 PF00252 Ribosomal protein L16p/L10e CQJ30_00740 PF00831 Ribosomal L29 protein CQJ30_00745 PF00366 Ribosomal protein S17 CQJ30_00750 PF00238 Ribosomal protein L14p/L23e CQJ30_00755 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 CQJ30_00755 PF00467 KOW motif CQJ30_00760 PF00673 ribosomal L5P family C-terminus CQJ30_00760 PF00281 Ribosomal protein L5 CQJ30_00765 PF00253 Ribosomal protein S14p/S29e CQJ30_00770 PF00410 Ribosomal protein S8 CQJ30_00775 PF00347 Ribosomal protein L6 CQJ30_00780 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast CQJ30_00785 PF03719 Ribosomal protein S5, C-terminal domain CQJ30_00785 PF00333 Ribosomal protein S5, N-terminal domain CQJ30_00790 PF00327 Ribosomal protein L30p/L7e CQJ30_00795 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A CQJ30_00800 PF00344 SecY translocase CQJ30_00805 PF05191 Adenylate kinase, active site lid CQJ30_00815 PF01176 Translation initiation factor 1A / IF-1 CQJ30_00820 PF00444 Ribosomal protein L36 CQJ30_00825 PF00416 Ribosomal protein S13/S18 CQJ30_00830 PF00411 Ribosomal protein S11 CQJ30_00835 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain CQJ30_00835 PF01000 RNA polymerase Rpb3/RpoA insert domain CQJ30_00835 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain CQJ30_00840 PF01196 Ribosomal protein L17 CQJ30_00850 PF00005 ABC transporter CQJ30_00855 PF00005 ABC transporter CQJ30_00865 PF01416 tRNA pseudouridine synthase CQJ30_00870 PF00572 Ribosomal protein L13 CQJ30_00875 PF00380 Ribosomal protein S9/S16 CQJ30_00880 PF00589 Phage integrase family CQJ30_00880 PF14659 Phage integrase, N-terminal SAM-like domain CQJ30_00890 PF00561 alpha/beta hydrolase fold CQJ30_00895 PF07486 Cell Wall Hydrolase CQJ30_00905 PF13396 Phospholipase_D-nuclease N-terminal CQJ30_00905 PF13091 PLD-like domain CQJ30_00915 PF10518 TAT (twin-arginine translocation) pathway signal sequence CQJ30_00915 PF00384 Molybdopterin oxidoreductase CQJ30_00915 PF04879 Molybdopterin oxidoreductase Fe4S4 domain CQJ30_00915 PF01568 Molydopterin dinucleotide binding domain CQJ30_00935 PF03862 SpoVAC/SpoVAEB sporulation membrane protein CQJ30_00955 PF07875 Coat F domain CQJ30_00975 PF03862 SpoVAC/SpoVAEB sporulation membrane protein CQJ30_00980 PF07451 Stage V sporulation protein AD (SpoVAD) CQJ30_00985 PF03862 SpoVAC/SpoVAEB sporulation membrane protein CQJ30_00995 PF04239 Protein of unknown function (DUF421) CQJ30_01030 PF00011 Hsp20/alpha crystallin family CQJ30_01075 PF03960 ArsC family CQJ30_01085 PF07728 AAA domain (dynein-related subfamily) CQJ30_01085 PF12592 Protein of unknown function (DUF3763) CQJ30_01085 PF17868 AAA lid domain CQJ30_01110 PF07875 Coat F domain CQJ30_01115 PF13823 Alcohol dehydrogenase GroES-associated CQJ30_01115 PF00107 Zinc-binding dehydrogenase CQJ30_01115 PF08240 Alcohol dehydrogenase GroES-like domain CQJ30_01125 PF07875 Coat F domain CQJ30_01130 PF01323 DSBA-like thioredoxin domain CQJ30_01135 PF00892 EamA-like transporter family CQJ30_01165 PF00380 Ribosomal protein S9/S16 CQJ30_01170 PF01566 Natural resistance-associated macrophage protein CQJ30_01180 PF02378 Phosphotransferase system, EIIC CQJ30_01180 PF00367 phosphotransferase system, EIIB CQJ30_01185 PF00392 Bacterial regulatory proteins, gntR family CQJ30_01185 PF07702 UTRA domain CQJ30_01205 PF13419 Haloacid dehalogenase-like hydrolase CQJ30_01210 PF01418 Helix-turn-helix domain, rpiR family CQJ30_01210 PF01380 SIS domain CQJ30_01215 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CQJ30_01220 PF00528 Binding-protein-dependent transport system inner membrane component CQJ30_01225 PF00528 Binding-protein-dependent transport system inner membrane component CQJ30_01225 PF12911 N-terminal TM domain of oligopeptide transport permease C CQJ30_01230 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CQJ30_01230 PF00005 ABC transporter CQJ30_01235 PF00005 ABC transporter CQJ30_01235 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CQJ30_01270 PF00589 Phage integrase family CQJ30_01270 PF02899 Phage integrase, N-terminal SAM-like domain CQJ30_01275 PF02899 Phage integrase, N-terminal SAM-like domain CQJ30_01275 PF00589 Phage integrase family CQJ30_01295 PF00392 Bacterial regulatory proteins, gntR family CQJ30_01295 PF07702 UTRA domain CQJ30_01305 PF01520 N-acetylmuramoyl-L-alanine amidase CQJ30_01310 PF10609 NUBPL iron-transfer P-loop NTPase CQJ30_01325 PF17898 Spore germination GerD central core domain CQJ30_01330 PF14089 KinB-signalling pathway activation in sporulation CQJ30_01335 PF01522 Polysaccharide deacetylase CQJ30_01405 PF00491 Arginase family CQJ30_01410 PF04542 Sigma-70 region 2 CQJ30_01410 PF08281 Sigma-70, region 4 CQJ30_01415 PF13490 Putative zinc-finger CQJ30_01420 PF02457 DisA bacterial checkpoint controller nucleotide-binding CQJ30_01425 PF07949 YbbR-like protein CQJ30_01430 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain CQJ30_01430 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III CQJ30_01430 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I CQJ30_01430 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II CQJ30_01440 PF01380 SIS domain CQJ30_01445 PF01546 Peptidase family M20/M25/M40 CQJ30_01445 PF07687 Peptidase dimerisation domain CQJ30_01460 PF01546 Peptidase family M20/M25/M40 CQJ30_01465 PF03806 AbgT putative transporter family CQJ30_01470 PF01546 Peptidase family M20/M25/M40 CQJ30_01470 PF07687 Peptidase dimerisation domain CQJ30_01475 PF01381 Helix-turn-helix CQJ30_01485 PF00398 Ribosomal RNA adenine dimethylase CQJ30_01505 PF01381 Helix-turn-helix CQJ30_01520 PF07995 Glucose / Sorbosone dehydrogenase CQJ30_01525 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CQJ30_01530 PF00072 Response regulator receiver domain CQJ30_01530 PF00486 Transcriptional regulatory protein, C terminal CQJ30_01535 PF00005 ABC transporter CQJ30_01540 PF02687 FtsX-like permease family CQJ30_01550 PF00440 Bacterial regulatory proteins, tetR family CQJ30_01550 PF17932 Tetracyclin repressor-like, C-terminal domain CQJ30_01560 PF00005 ABC transporter CQJ30_01565 PF01613 Flavin reductase like domain CQJ30_01570 PF01037 Lrp/AsnC ligand binding domain CQJ30_01585 PF08241 Methyltransferase domain CQJ30_01615 PF07690 Major Facilitator Superfamily CQJ30_01620 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CQJ30_01620 PF03466 LysR substrate binding domain CQJ30_01650 PF01327 Polypeptide deformylase CQJ30_01675 PF03551 Transcriptional regulator PadR-like family CQJ30_01690 PF00480 ROK family CQJ30_01725 PF00005 ABC transporter CQJ30_01730 PF00392 Bacterial regulatory proteins, gntR family CQJ30_01740 PF13977 BetI-type transcriptional repressor, C-terminal CQJ30_01740 PF00440 Bacterial regulatory proteins, tetR family CQJ30_01750 PF07486 Cell Wall Hydrolase CQJ30_01755 PF11188 Protein of unknown function (DUF2975) CQJ30_01760 PF13443 Cro/C1-type HTH DNA-binding domain CQJ30_01770 PF00860 Permease family CQJ30_01775 PF03477 ATP cone domain CQJ30_01775 PF13597 Anaerobic ribonucleoside-triphosphate reductase CQJ30_01780 PF04055 Radical SAM superfamily CQJ30_01800 PF07282 Putative transposase DNA-binding domain CQJ30_01800 PF01385 Probable transposase CQJ30_01800 PF12323 Helix-turn-helix domain CQJ30_01830 PF00005 ABC transporter CQJ30_01830 PF00571 CBS domain CQJ30_01835 PF00528 Binding-protein-dependent transport system inner membrane component CQJ30_01855 PF00872 Transposase, Mutator family CQJ30_01870 PF00324 Amino acid permease CQJ30_01885 PF02770 Acyl-CoA dehydrogenase, middle domain CQJ30_01885 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CQJ30_01885 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CQJ30_01900 PF02660 Glycerol-3-phosphate acyltransferase CQJ30_01905 PF00535 Glycosyl transferase family 2 CQJ30_01910 PF03358 NADPH-dependent FMN reductase CQJ30_01915 PF00370 FGGY family of carbohydrate kinases, N-terminal domain CQJ30_01915 PF02782 FGGY family of carbohydrate kinases, C-terminal domain CQJ30_01920 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase CQJ30_01920 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain CQJ30_01925 PF01418 Helix-turn-helix domain, rpiR family CQJ30_01925 PF01380 SIS domain CQJ30_01930 PF02447 GntP family permease CQJ30_01940 PF00890 FAD binding domain CQJ30_01945 PF00266 Aminotransferase class-V CQJ30_01950 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain CQJ30_01970 PF00872 Transposase, Mutator family CQJ30_01980 PF00440 Bacterial regulatory proteins, tetR family CQJ30_01980 PF08361 MAATS-type transcriptional repressor, C-terminal region CQJ30_01985 PF00999 Sodium/hydrogen exchanger family CQJ30_01990 PF07282 Putative transposase DNA-binding domain CQJ30_01990 PF01385 Probable transposase CQJ30_01990 PF12323 Helix-turn-helix domain CQJ30_02000 PF00268 Ribonucleotide reductase, small chain CQJ30_02005 PF00258 Flavodoxin CQJ30_02010 PF03477 ATP cone domain CQJ30_02010 PF00317 Ribonucleotide reductase, all-alpha domain CQJ30_02010 PF02867 Ribonucleotide reductase, barrel domain CQJ30_02020 PF00950 ABC 3 transport family CQJ30_02035 PF00581 Rhodanese-like domain CQJ30_02035 PF01206 Sulfurtransferase TusA CQJ30_02040 PF13686 DsrE/DsrF/DrsH-like family CQJ30_02045 PF00753 Metallo-beta-lactamase superfamily CQJ30_02045 PF00581 Rhodanese-like domain CQJ30_02050 PF01206 Sulfurtransferase TusA CQJ30_02055 PF01925 Sulfite exporter TauE/SafE CQJ30_02060 PF02583 Metal-sensitive transcriptional repressor CQJ30_02065 PF00581 Rhodanese-like domain CQJ30_02090 PF00271 Helicase conserved C-terminal domain CQJ30_02090 PF12419 SNF2 Helicase protein CQJ30_02090 PF00176 SNF2 family N-terminal domain CQJ30_02110 PF02384 N-6 DNA Methylase CQJ30_02130 PF00149 Calcineurin-like phosphoesterase CQJ30_02130 PF02872 5'-nucleotidase, C-terminal domain CQJ30_02140 PF00005 ABC transporter CQJ30_02145 PF00528 Binding-protein-dependent transport system inner membrane component CQJ30_02150 PF00528 Binding-protein-dependent transport system inner membrane component CQJ30_02175 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain CQJ30_02175 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain CQJ30_02190 PF02110 Hydroxyethylthiazole kinase family CQJ30_02195 PF08543 Phosphomethylpyrimidine kinase CQJ30_02205 PF03070 TENA/THI-4/PQQC family CQJ30_02210 PF00210 Ferritin-like domain CQJ30_02215 PF00027 Cyclic nucleotide-binding domain CQJ30_02215 PF13545 Crp-like helix-turn-helix domain CQJ30_02220 PF00403 Heavy-metal-associated domain CQJ30_02235 PF01967 MoaC family CQJ30_02240 PF00528 Binding-protein-dependent transport system inner membrane component CQJ30_02250 PF00994 Probable molybdopterin binding domain CQJ30_02255 PF12804 MobA-like NTP transferase domain CQJ30_02260 PF00325 Bacterial regulatory proteins, crp family CQJ30_02260 PF00027 Cyclic nucleotide-binding domain CQJ30_02265 PF03205 Molybdopterin guanine dinucleotide synthesis protein B CQJ30_02275 PF02391 MoaE protein CQJ30_02280 PF03454 MoeA C-terminal region (domain IV) CQJ30_02280 PF03453 MoeA N-terminal region (domain I and II) CQJ30_02280 PF00994 Probable molybdopterin binding domain CQJ30_02285 PF00899 ThiF family CQJ30_02290 PF06463 Molybdenum Cofactor Synthesis C CQJ30_02290 PF04055 Radical SAM superfamily CQJ30_02310 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain CQJ30_02310 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase CQJ30_02315 PF08279 HTH domain CQJ30_02315 PF05043 Mga helix-turn-helix domain CQJ30_02315 PF00874 PRD domain CQJ30_02315 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CQJ30_02325 PF02378 Phosphotransferase system, EIIC CQJ30_02330 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CQJ30_02335 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit CQJ30_02340 PF00232 Glycosyl hydrolase family 1 CQJ30_02350 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) CQJ30_02390 PF02665 Nitrate reductase gamma subunit CQJ30_02395 PF02613 Nitrate reductase delta subunit CQJ30_02400 PF13247 4Fe-4S dicluster domain CQJ30_02400 PF14711 Respiratory nitrate reductase beta C-terminal CQJ30_02405 PF00384 Molybdopterin oxidoreductase CQJ30_02405 PF01568 Molydopterin dinucleotide binding domain CQJ30_02405 PF14710 Respiratory nitrate reductase alpha N-terminal CQJ30_02410 PF07690 Major Facilitator Superfamily CQJ30_02415 PF07690 Major Facilitator Superfamily CQJ30_02420 PF03649 Uncharacterised protein family (UPF0014) CQJ30_02425 PF00005 ABC transporter CQJ30_02435 PF01274 Malate synthase CQJ30_02440 PF00463 Isocitrate lyase family CQJ30_02445 PF12729 Four helix bundle sensory module for signal transduction CQJ30_02445 PF00672 HAMP domain CQJ30_02445 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CQJ30_02450 PF01266 FAD dependent oxidoreductase CQJ30_02455 PF04073 Aminoacyl-tRNA editing domain CQJ30_02460 PF01751 Toprim domain CQJ30_02460 PF01131 DNA topoisomerase CQJ30_02465 PF01047 MarR family CQJ30_02485 PF00288 GHMP kinases N terminal domain CQJ30_02485 PF10509 Galactokinase galactose-binding signature CQJ30_02485 PF08544 GHMP kinases C terminal CQJ30_02495 PF00288 GHMP kinases N terminal domain CQJ30_02495 PF08544 GHMP kinases C terminal CQJ30_02500 PF01070 FMN-dependent dehydrogenase CQJ30_02505 PF07875 Coat F domain CQJ30_02520 PF07875 Coat F domain CQJ30_02530 PF17956 Nicotinate phosphoribosyltransferase C-terminal domain CQJ30_02530 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family CQJ30_02530 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain CQJ30_02540 PF00188 Cysteine-rich secretory protein family CQJ30_02555 PF04172 LrgB-like family CQJ30_02560 PF03788 LrgA family CQJ30_02565 PF03626 Prokaryotic Cytochrome C oxidase subunit IV CQJ30_02570 PF00510 Cytochrome c oxidase subunit III CQJ30_02575 PF00115 Cytochrome C and Quinol oxidase polypeptide I CQJ30_02580 PF02790 Cytochrome C oxidase subunit II, transmembrane domain CQJ30_02585 PF14139 YpzG-like protein CQJ30_02590 PF09335 SNARE associated Golgi protein CQJ30_02595 PF02673 Bacitracin resistance protein BacA CQJ30_02600 PF00072 Response regulator receiver domain CQJ30_02600 PF00486 Transcriptional regulatory protein, C terminal CQJ30_02605 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CQJ30_02605 PF00672 HAMP domain CQJ30_02605 PF00512 His Kinase A (phospho-acceptor) domain CQJ30_02610 PF01323 DSBA-like thioredoxin domain CQJ30_02615 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CQJ30_02615 PF00672 HAMP domain CQJ30_02615 PF02743 Cache domain CQJ30_02620 PF00872 Transposase, Mutator family CQJ30_02630 PF00005 ABC transporter CQJ30_02630 PF08402 TOBE domain CQJ30_02635 PF00528 Binding-protein-dependent transport system inner membrane component CQJ30_02640 PF00528 Binding-protein-dependent transport system inner membrane component CQJ30_02645 PF13416 Bacterial extracellular solute-binding protein CQJ30_02655 PF06207 Protein of unknown function (DUF1002) CQJ30_02670 PF01384 Phosphate transporter family CQJ30_02675 PF01865 Protein of unknown function DUF47 CQJ30_02680 PF00768 D-alanyl-D-alanine carboxypeptidase CQJ30_02680 PF07943 Penicillin-binding protein 5, C-terminal domain CQJ30_02685 PF13538 UvrD-like helicase C-terminal domain CQJ30_02690 PF01118 Semialdehyde dehydrogenase, NAD binding domain CQJ30_02690 PF02774 Semialdehyde dehydrogenase, dimerisation domain CQJ30_02695 PF01960 ArgJ family CQJ30_02700 PF00696 Amino acid kinase family CQJ30_02705 PF00202 Aminotransferase class-III CQJ30_02710 PF00117 Glutamine amidotransferase class-I CQJ30_02710 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain CQJ30_02715 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain CQJ30_02715 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain CQJ30_02715 PF02142 MGS-like domain CQJ30_02720 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain CQJ30_02720 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain CQJ30_02725 PF00764 Arginosuccinate synthase CQJ30_02730 PF00206 Lyase CQJ30_02730 PF14698 Argininosuccinate lyase C-terminal CQJ30_02745 PF00474 Sodium:solute symporter family CQJ30_02750 PF01565 FAD binding domain CQJ30_02750 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain CQJ30_02765 PF02384 N-6 DNA Methylase CQJ30_02775 PF11867 Domain of unknown function (DUF3387) CQJ30_02775 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) CQJ30_02775 PF18766 SWI2/SNF2 ATPase CQJ30_02785 PF02782 FGGY family of carbohydrate kinases, C-terminal domain CQJ30_02785 PF00370 FGGY family of carbohydrate kinases, N-terminal domain CQJ30_02790 PF00596 Class II Aldolase and Adducin N-terminal domain CQJ30_02795 PF02610 L-arabinose isomerase CQJ30_02795 PF11762 L-arabinose isomerase C-terminal domain CQJ30_02800 PF03894 D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase CQJ30_02800 PF09364 XFP N-terminal domain CQJ30_02800 PF09363 XFP C-terminal domain CQJ30_02805 PF01594 AI-2E family transporter CQJ30_02810 PF00392 Bacterial regulatory proteins, gntR family CQJ30_02815 PF13685 Iron-containing alcohol dehydrogenase CQJ30_02820 PF13685 Iron-containing alcohol dehydrogenase CQJ30_02825 PF13407 Periplasmic binding protein domain CQJ30_02830 PF00005 ABC transporter CQJ30_02835 PF02653 Branched-chain amino acid transport system / permease component CQJ30_02840 PF00480 ROK family CQJ30_02850 PF01261 Xylose isomerase-like TIM barrel CQJ30_02855 PF00370 FGGY family of carbohydrate kinases, N-terminal domain CQJ30_02855 PF02782 FGGY family of carbohydrate kinases, C-terminal domain CQJ30_02860 PF04616 Glycosyl hydrolases family 43 CQJ30_02860 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain CQJ30_02865 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CQJ30_02865 PF06580 Histidine kinase CQJ30_02865 PF00672 HAMP domain CQJ30_02865 PF02743 Cache domain CQJ30_02870 PF17853 GGDEF-like domain CQJ30_02870 PF12833 Helix-turn-helix domain CQJ30_02880 PF00528 Binding-protein-dependent transport system inner membrane component CQJ30_02885 PF00528 Binding-protein-dependent transport system inner membrane component CQJ30_02890 PF18627 Peptidoglycan GlcNAc deacetylase N-terminal domain CQJ30_02890 PF01522 Polysaccharide deacetylase CQJ30_02895 PF13472 GDSL-like Lipase/Acylhydrolase family CQJ30_02900 PF04854 Protein of unknown function, DUF624 CQJ30_02905 PF02894 Oxidoreductase family, C-terminal alpha/beta domain CQJ30_02905 PF01408 Oxidoreductase family, NAD-binding Rossmann fold CQJ30_02910 PF00248 Aldo/keto reductase family CQJ30_02915 PF00440 Bacterial regulatory proteins, tetR family CQJ30_02915 PF08359 YsiA-like protein, C-terminal region CQJ30_02920 PF13520 Amino acid permease CQJ30_02925 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase CQJ30_02925 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain CQJ30_02930 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) CQJ30_02930 PF02817 e3 binding domain CQJ30_02930 PF00364 Biotin-requiring enzyme CQJ30_02935 PF00676 Dehydrogenase E1 component CQJ30_02940 PF02780 Transketolase, C-terminal domain CQJ30_02940 PF02779 Transketolase, pyrimidine binding domain CQJ30_02955 PF13416 Bacterial extracellular solute-binding protein CQJ30_02960 PF00528 Binding-protein-dependent transport system inner membrane component CQJ30_02965 PF00528 Binding-protein-dependent transport system inner membrane component CQJ30_02970 PF16353 Domain of unknown function(DUF4981) CQJ30_02970 PF00703 Glycosyl hydrolases family 2 CQJ30_02970 PF02837 Glycosyl hydrolases family 2, sugar binding domain CQJ30_02970 PF02929 Beta galactosidase small chain CQJ30_02970 PF02836 Glycosyl hydrolases family 2, TIM barrel domain CQJ30_02975 PF16874 Glycosyl hydrolase family 36 C-terminal domain CQJ30_02975 PF16875 Glycosyl hydrolase family 36 N-terminal domain CQJ30_03000 PF04343 Protein of unknown function, DUF488 CQJ30_03005 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III CQJ30_03005 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I CQJ30_03005 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II CQJ30_03005 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain CQJ30_03010 PF00288 GHMP kinases N terminal domain CQJ30_03010 PF08544 GHMP kinases C terminal CQJ30_03010 PF10509 Galactokinase galactose-binding signature CQJ30_03015 PF16363 GDP-mannose 4,6 dehydratase CQJ30_03020 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain CQJ30_03020 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain CQJ30_03025 PF01263 Aldose 1-epimerase CQJ30_03030 PF00356 Bacterial regulatory proteins, lacI family CQJ30_03035 PF00005 ABC transporter CQJ30_03035 PF03459 TOBE domain CQJ30_03035 PF17912 MalK OB fold domain CQJ30_03040 PF13556 PucR C-terminal helix-turn-helix domain CQJ30_03050 PF10112 5-bromo-4-chloroindolyl phosphate hydrolysis protein CQJ30_03055 PF05816 Toxic anion resistance protein (TelA) CQJ30_03060 PF16868 NMT1-like family CQJ30_03075 PF01098 Cell cycle protein CQJ30_03085 PF03471 Transporter associated domain CQJ30_03085 PF01595 Cyclin M transmembrane N-terminal domain CQJ30_03085 PF00571 CBS domain CQJ30_03090 PF00571 CBS domain CQJ30_03090 PF01769 Divalent cation transporter CQJ30_03090 PF03448 MgtE intracellular N domain CQJ30_03100 PF07478 D-ala D-ala ligase C-terminus CQJ30_03100 PF01820 D-ala D-ala ligase N-terminus CQJ30_03105 PF01225 Mur ligase family, catalytic domain CQJ30_03105 PF08245 Mur ligase middle domain CQJ30_03105 PF02875 Mur ligase family, glutamate ligase domain CQJ30_03115 PF00270 DEAD/DEAH box helicase CQJ30_03115 PF00271 Helicase conserved C-terminal domain CQJ30_03120 PF03703 Bacterial PH domain CQJ30_03125 PF03703 Bacterial PH domain CQJ30_03130 PF01694 Rhomboid family CQJ30_03135 PF01648 4'-phosphopantetheinyl transferase superfamily CQJ30_03150 PF01402 Ribbon-helix-helix protein, copG family CQJ30_03155 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system CQJ30_03160 PF16921 Tex protein YqgF-like domain CQJ30_03160 PF09371 Tex-like protein N-terminal domain CQJ30_03160 PF00575 S1 RNA binding domain CQJ30_03160 PF17674 HHH domain CQJ30_03170 PF17283 SprT-like zinc ribbon domain CQJ30_03170 PF10263 SprT-like family CQJ30_03240 PF00814 Glycoprotease family CQJ30_03245 PF00583 Acetyltransferase (GNAT) family CQJ30_03250 PF00814 Glycoprotease family CQJ30_03255 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE CQJ30_03260 PF12848 ABC transporter CQJ30_03260 PF16326 ABC transporter C-terminal domain CQJ30_03260 PF00005 ABC transporter CQJ30_03265 PF06971 Putative DNA-binding protein N-terminus CQJ30_03265 PF02629 CoA binding domain CQJ30_03270 PF02416 mttA/Hcf106 family CQJ30_03275 PF00902 Sec-independent protein translocase protein (TatC) CQJ30_03280 PF02517 CPBP intramembrane metalloprotease CQJ30_03285 PF00166 Chaperonin 10 Kd subunit CQJ30_03290 PF00118 TCP-1/cpn60 chaperonin family CQJ30_03295 PF17912 MalK OB fold domain CQJ30_03295 PF00005 ABC transporter CQJ30_03295 PF03459 TOBE domain CQJ30_03300 PF00528 Binding-protein-dependent transport system inner membrane component CQJ30_03310 PF13416 Bacterial extracellular solute-binding protein CQJ30_03315 PF03009 Glycerophosphoryl diester phosphodiesterase family CQJ30_03320 PF00440 Bacterial regulatory proteins, tetR family CQJ30_03325 PF00005 ABC transporter CQJ30_03325 PF00664 ABC transporter transmembrane region CQJ30_03330 PF00664 ABC transporter transmembrane region CQJ30_03330 PF00005 ABC transporter CQJ30_03340 PF01385 Probable transposase CQJ30_03340 PF12323 Helix-turn-helix domain CQJ30_03340 PF07282 Putative transposase DNA-binding domain CQJ30_03350 PF01381 Helix-turn-helix CQJ30_03355 PF00691 OmpA family CQJ30_03355 PF05736 OprF membrane domain CQJ30_03360 PF12832 MFS_1 like family CQJ30_03375 PF02378 Phosphotransferase system, EIIC CQJ30_03375 PF00367 phosphotransferase system, EIIB CQJ30_03380 PF03123 CAT RNA binding domain CQJ30_03380 PF00874 PRD domain CQJ30_03385 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 CQJ30_03390 PF00860 Permease family CQJ30_03395 PF10415 Fumarase C C-terminus CQJ30_03395 PF00206 Lyase CQJ30_03410 PF07726 ATPase family associated with various cellular activities (AAA) CQJ30_03410 PF17863 AAA lid domain CQJ30_03415 PF01882 Protein of unknown function DUF58 CQJ30_03420 PF11992 Domain of unknown function (DUF3488) CQJ30_03420 PF13559 Domain of unknown function (DUF4129) CQJ30_03420 PF01841 Transglutaminase-like superfamily CQJ30_03425 PF00117 Glutamine amidotransferase class-I CQJ30_03425 PF02540 NAD synthase CQJ30_03425 PF00958 GMP synthase C terminal domain CQJ30_03445 PF00860 Permease family CQJ30_03450 PF03123 CAT RNA binding domain CQJ30_03450 PF00874 PRD domain CQJ30_03455 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 CQJ30_03455 PF02378 Phosphotransferase system, EIIC CQJ30_03455 PF00367 phosphotransferase system, EIIB CQJ30_03460 PF00381 PTS HPr component phosphorylation site CQJ30_03465 PF02896 PEP-utilising enzyme, TIM barrel domain CQJ30_03465 PF00391 PEP-utilising enzyme, mobile domain CQJ30_03465 PF05524 PEP-utilising enzyme, N-terminal CQJ30_03470 PF00206 Lyase CQJ30_03470 PF10397 Adenylosuccinate lyase C-terminus CQJ30_03480 PF13382 Adenine deaminase C-terminal domain CQJ30_03480 PF01979 Amidohydrolase family CQJ30_03485 PF11258 Protein of unknown function (DUF3048) N-terminal domain CQJ30_03485 PF17479 Protein of unknown function (DUF3048) C-terminal domain CQJ30_03490 PF01371 Trp repressor protein CQJ30_03495 PF01884 PcrB family CQJ30_03500 PF13361 UvrD-like helicase C-terminal domain CQJ30_03500 PF00580 UvrD/REP helicase N-terminal domain CQJ30_03505 PF12826 Helix-hairpin-helix motif CQJ30_03505 PF03119 NAD-dependent DNA ligase C4 zinc finger domain CQJ30_03505 PF01653 NAD-dependent DNA ligase adenylation domain CQJ30_03505 PF00533 BRCA1 C Terminus (BRCT) domain CQJ30_03505 PF03120 NAD-dependent DNA ligase OB-fold domain CQJ30_03510 PF07537 CamS sex pheromone cAM373 precursor CQJ30_03515 PF02844 Phosphoribosylglycinamide synthetase, N domain CQJ30_03515 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain CQJ30_03515 PF02843 Phosphoribosylglycinamide synthetase, C domain CQJ30_03520 PF02142 MGS-like domain CQJ30_03520 PF01808 AICARFT/IMPCHase bienzyme CQJ30_03525 PF00551 Formyl transferase CQJ30_03530 PF00586 AIR synthase related protein, N-terminal domain CQJ30_03530 PF02769 AIR synthase related protein, C-terminal domain CQJ30_03535 PF00156 Phosphoribosyl transferase domain CQJ30_03540 PF02769 AIR synthase related protein, C-terminal domain CQJ30_03540 PF00586 AIR synthase related protein, N-terminal domain CQJ30_03540 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain CQJ30_03550 PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase CQJ30_03555 PF01259 SAICAR synthetase CQJ30_03560 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain CQJ30_03560 PF02222 ATP-grasp domain CQJ30_03565 PF00731 AIR carboxylase CQJ30_03570 PF03618 Kinase/pyrophosphorylase CQJ30_03575 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain CQJ30_03575 PF02896 PEP-utilising enzyme, TIM barrel domain CQJ30_03575 PF00391 PEP-utilising enzyme, mobile domain CQJ30_03580 PF07997 Protein of unknown function (DUF1694) CQJ30_03585 PF02686 Glu-tRNAGln amidotransferase C subunit CQJ30_03590 PF01425 Amidase CQJ30_03595 PF02934 GatB/GatE catalytic domain CQJ30_03595 PF02637 GatB domain CQJ30_03605 PF00248 Aldo/keto reductase family CQJ30_03610 PF00842 Alanine racemase, C-terminal domain CQJ30_03610 PF01168 Alanine racemase, N-terminal domain CQJ30_03615 PF00171 Aldehyde dehydrogenase family CQJ30_03620 PF00781 Diacylglycerol kinase catalytic domain CQJ30_03640 PF07730 Histidine kinase CQJ30_03640 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CQJ30_03645 PF00072 Response regulator receiver domain CQJ30_03645 PF00196 Bacterial regulatory proteins, luxR family CQJ30_03655 PF12792 CSS motif domain associated with EAL CQJ30_03655 PF00563 EAL domain CQJ30_03665 PF12704 MacB-like periplasmic core domain CQJ30_03665 PF02687 FtsX-like permease family CQJ30_03670 PF00005 ABC transporter CQJ30_03680 PF12850 Calcineurin-like phosphoesterase superfamily domain CQJ30_03685 PF00872 Transposase, Mutator family CQJ30_03690 PF00324 Amino acid permease CQJ30_03705 PF00440 Bacterial regulatory proteins, tetR family CQJ30_03710 PF00873 AcrB/AcrD/AcrF family CQJ30_03715 PF13732 Domain of unknown function (DUF4162) CQJ30_03715 PF00005 ABC transporter CQJ30_03730 PF02475 Met-10+ like-protein CQJ30_03730 PF01938 TRAM domain CQJ30_03730 PF05958 tRNA (Uracil-5-)-methyltransferase CQJ30_03735 PF01638 HxlR-like helix-turn-helix CQJ30_03740 PF00296 Luciferase-like monooxygenase CQJ30_03745 PF03358 NADPH-dependent FMN reductase CQJ30_03770 PF02223 Thymidylate kinase CQJ30_03775 PF05598 Transposase domain (DUF772) CQJ30_03810 PF07726 ATPase family associated with various cellular activities (AAA) CQJ30_03810 PF17863 AAA lid domain CQJ30_03855 PF01022 Bacterial regulatory protein, arsR family CQJ30_03865 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family CQJ30_03865 PF00356 Bacterial regulatory proteins, lacI family CQJ30_03895 PF07282 Putative transposase DNA-binding domain CQJ30_03895 PF01385 Probable transposase CQJ30_03895 PF12323 Helix-turn-helix domain CQJ30_03905 PF02016 LD-carboxypeptidase N-terminal domain CQJ30_03905 PF17676 LD-carboxypeptidase C-terminal domain CQJ30_03910 PF00356 Bacterial regulatory proteins, lacI family CQJ30_03915 PF01306 LacY proton/sugar symporter CQJ30_03920 PF00251 Glycosyl hydrolases family 32 N-terminal domain CQJ30_03920 PF08244 Glycosyl hydrolases family 32 C terminal CQJ30_03930 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CQJ30_03935 PF00171 Aldehyde dehydrogenase family CQJ30_03940 PF01047 MarR family CQJ30_03945 PF00255 Glutathione peroxidase CQJ30_03950 PF00753 Metallo-beta-lactamase superfamily CQJ30_03950 PF16123 Hydroxyacylglutathione hydrolase C-terminus CQJ30_03960 PF00528 Binding-protein-dependent transport system inner membrane component CQJ30_03965 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CQJ30_03970 PF07883 Cupin domain CQJ30_03990 PF13722 5TM C-terminal transporter carbon starvation CstA CQJ30_03990 PF02554 Carbon starvation protein CstA CQJ30_03995 PF00072 Response regulator receiver domain CQJ30_03995 PF04397 LytTr DNA-binding domain CQJ30_04000 PF06580 Histidine kinase CQJ30_04000 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CQJ30_04000 PF13492 GAF domain CQJ30_04000 PF07694 5TMR of 5TMR-LYT CQJ30_04005 PF00872 Transposase, Mutator family CQJ30_04020 PF04463 Protein of unknown function (DUF523) CQJ30_04030 PF01386 Ribosomal L25p family CQJ30_04030 PF14693 Ribosomal protein TL5, C-terminal domain CQJ30_04040 PF04892 VanZ like family CQJ30_04045 PF00497 Bacterial extracellular solute-binding proteins, family 3 CQJ30_04050 PF00528 Binding-protein-dependent transport system inner membrane component CQJ30_04055 PF00005 ABC transporter CQJ30_04070 PF00909 Ammonium Transporter Family CQJ30_04075 PF00082 Subtilase family CQJ30_04075 PF13860 FlgD Ig-like domain CQJ30_04075 PF02225 PA domain CQJ30_04075 PF05922 Peptidase inhibitor I9 CQJ30_04085 PF02566 OsmC-like protein CQJ30_04090 PF03006 Haemolysin-III related CQJ30_04095 PF00501 AMP-binding enzyme CQJ30_04095 PF13193 AMP-binding enzyme C-terminal domain CQJ30_04125 PF06738 Putative threonine/serine exporter CQJ30_04135 PF02681 Divergent PAP2 family CQJ30_04160 PF00563 EAL domain CQJ30_04160 PF01590 GAF domain CQJ30_04160 PF00990 Diguanylate cyclase, GGDEF domain CQJ30_04160 PF00360 Phytochrome region CQJ30_04175 PF00990 Diguanylate cyclase, GGDEF domain CQJ30_04175 PF00072 Response regulator receiver domain CQJ30_04180 PF01554 MatE CQJ30_04185 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CQJ30_04185 PF00512 His Kinase A (phospho-acceptor) domain CQJ30_04185 PF00989 PAS fold CQJ30_04185 PF13426 PAS domain CQJ30_04185 PF13188 PAS domain CQJ30_04205 PF00689 Cation transporting ATPase, C-terminus CQJ30_04205 PF00690 Cation transporter/ATPase, N-terminus CQJ30_04215 PF02421 Ferrous iron transport protein B CQJ30_04215 PF17910 FeoB cytosolic helical domain CQJ30_04215 PF07664 Ferrous iron transport protein B C terminus CQJ30_04215 PF07670 Nucleoside recognition CQJ30_04225 PF00497 Bacterial extracellular solute-binding proteins, family 3 CQJ30_04230 PF00528 Binding-protein-dependent transport system inner membrane component CQJ30_04235 PF00005 ABC transporter CQJ30_04245 PF03358 NADPH-dependent FMN reductase CQJ30_04250 PF00005 ABC transporter CQJ30_04250 PF12848 ABC transporter CQJ30_04260 PF00487 Fatty acid desaturase CQJ30_04265 PF07730 Histidine kinase CQJ30_04270 PF00196 Bacterial regulatory proteins, luxR family CQJ30_04270 PF00072 Response regulator receiver domain CQJ30_04280 PF04055 Radical SAM superfamily CQJ30_04285 PF01228 Glycine radical CQJ30_04285 PF02901 Pyruvate formate lyase-like CQJ30_04290 PF01943 Polysaccharide biosynthesis protein CQJ30_04300 PF03741 Integral membrane protein TerC family CQJ30_04310 PF00557 Metallopeptidase family M24 CQJ30_04320 PF06569 Protein of unknown function (DUF1128) CQJ30_04325 PF01451 Low molecular weight phosphotyrosine protein phosphatase CQJ30_04335 PF03631 Virulence factor BrkB CQJ30_04345 PF07690 Major Facilitator Superfamily CQJ30_04355 PF14167 YfkD-like protein CQJ30_04365 PF01522 Polysaccharide deacetylase CQJ30_04370 PF02733 Dak1 domain CQJ30_04375 PF02734 DAK2 domain CQJ30_04385 PF05958 tRNA (Uracil-5-)-methyltransferase CQJ30_04385 PF01938 TRAM domain CQJ30_04420 PF02361 Cobalt transport protein CQJ30_04460 PF02683 Cytochrome C biogenesis protein transmembrane region CQJ30_04465 PF00578 AhpC/TSA family CQJ30_04470 PF00486 Transcriptional regulatory protein, C terminal CQJ30_04470 PF00072 Response regulator receiver domain CQJ30_04475 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CQJ30_04475 PF18719 ArlS sensor domain CQJ30_04475 PF00512 His Kinase A (phospho-acceptor) domain CQJ30_04485 PF13005 zinc-finger binding domain of transposase IS66 CQJ30_04485 PF13007 Transposase C of IS166 homeodomain CQJ30_04485 PF13817 IS66 C-terminal element CQJ30_04485 PF03050 Transposase IS66 family CQJ30_04505 PF00581 Rhodanese-like domain CQJ30_04505 PF01206 Sulfurtransferase TusA CQJ30_04510 PF13686 DsrE/DsrF/DrsH-like family CQJ30_04515 PF00753 Metallo-beta-lactamase superfamily CQJ30_04515 PF00581 Rhodanese-like domain CQJ30_04520 PF01206 Sulfurtransferase TusA CQJ30_04525 PF01925 Sulfite exporter TauE/SafE CQJ30_04530 PF02583 Metal-sensitive transcriptional repressor CQJ30_04535 PF00581 Rhodanese-like domain CQJ30_04540 PF00581 Rhodanese-like domain CQJ30_04555 PF00665 Integrase core domain CQJ30_04565 PF00665 Integrase core domain CQJ30_04565 PF02796 Helix-turn-helix domain of resolvase CQJ30_04570 PF01695 IstB-like ATP binding protein CQJ30_04575 PF07508 Recombinase CQJ30_04575 PF13408 Recombinase zinc beta ribbon domain CQJ30_04590 PF13005 zinc-finger binding domain of transposase IS66 CQJ30_04590 PF13817 IS66 C-terminal element CQJ30_04590 PF13007 Transposase C of IS166 homeodomain CQJ30_04590 PF03050 Transposase IS66 family CQJ30_04625 PF02683 Cytochrome C biogenesis protein transmembrane region CQJ30_04630 PF00578 AhpC/TSA family CQJ30_04635 PF00072 Response regulator receiver domain CQJ30_04635 PF00486 Transcriptional regulatory protein, C terminal CQJ30_04640 PF00512 His Kinase A (phospho-acceptor) domain CQJ30_04640 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CQJ30_04640 PF00672 HAMP domain CQJ30_04645 PF00704 Glycosyl hydrolases family 18 CQJ30_04645 PF01476 LysM domain CQJ30_04655 PF01476 LysM domain CQJ30_04655 PF00877 NlpC/P60 family CQJ30_04660 PF13686 DsrE/DsrF/DrsH-like family CQJ30_04670 PF00581 Rhodanese-like domain CQJ30_04670 PF00753 Metallo-beta-lactamase superfamily CQJ30_04675 PF01209 ubiE/COQ5 methyltransferase family CQJ30_04685 PF02583 Metal-sensitive transcriptional repressor CQJ30_04690 PF01206 Sulfurtransferase TusA CQJ30_04695 PF13686 DsrE/DsrF/DrsH-like family CQJ30_04705 PF00581 Rhodanese-like domain CQJ30_04710 PF00581 Rhodanese-like domain CQJ30_04710 PF01206 Sulfurtransferase TusA CQJ30_04715 PF00753 Metallo-beta-lactamase superfamily CQJ30_04715 PF00581 Rhodanese-like domain CQJ30_04720 PF01206 Sulfurtransferase TusA CQJ30_04725 PF01925 Sulfite exporter TauE/SafE CQJ30_04745 PF12389 Camelysin metallo-endopeptidase CQJ30_04815 PF01384 Phosphate transporter family CQJ30_04830 PF13407 Periplasmic binding protein domain CQJ30_04850 PF03275 UDP-galactopyranose mutase CQJ30_04855 PF01717 Cobalamin-independent synthase, Catalytic domain CQJ30_04865 PF01381 Helix-turn-helix CQJ30_04890 PF04204 Homoserine O-succinyltransferase CQJ30_04910 PF07730 Histidine kinase CQJ30_04915 PF00072 Response regulator receiver domain CQJ30_04915 PF00196 Bacterial regulatory proteins, luxR family CQJ30_04920 PF00005 ABC transporter CQJ30_04935 PF11728 Putative aromatic acid exporter C-terminal domain CQJ30_04935 PF06081 Aromatic acid exporter family member 1 CQJ30_04945 PF00392 Bacterial regulatory proteins, gntR family CQJ30_04950 PF00005 ABC transporter CQJ30_04960 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus CQJ30_04960 PF00361 Proton-conducting membrane transporter CQJ30_04965 PF10070 Uncharacterized protein conserved in bacteria (DUF2309) CQJ30_04970 PF10057 Uncharacterized conserved protein (DUF2294) CQJ30_04975 PF00872 Transposase, Mutator family CQJ30_04980 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain CQJ30_04980 PF13378 Enolase C-terminal domain-like CQJ30_04985 PF00561 alpha/beta hydrolase fold CQJ30_04995 PF00425 chorismate binding enzyme CQJ30_05000 PF04308 Ribonuclease H-like CQJ30_05005 PF01554 MatE CQJ30_05010 PF01048 Phosphorylase superfamily CQJ30_05015 PF13654 AAA domain CQJ30_05015 PF05362 Lon protease (S16) C-terminal proteolytic domain CQJ30_05025 PF00196 Bacterial regulatory proteins, luxR family CQJ30_05025 PF00072 Response regulator receiver domain CQJ30_05040 PF00563 EAL domain CQJ30_05040 PF10388 EAL-domain associated signalling protein domain CQJ30_05045 PF00155 Aminotransferase class I and II CQJ30_05050 PF08443 RimK-like ATP-grasp domain CQJ30_05060 PF01507 Phosphoadenosine phosphosulfate reductase family CQJ30_05070 PF00667 FAD binding domain CQJ30_05070 PF00258 Flavodoxin CQJ30_05070 PF00175 Oxidoreductase NAD-binding domain CQJ30_05075 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain CQJ30_05075 PF01077 Nitrite and sulphite reductase 4Fe-4S domain CQJ30_05080 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CQJ30_05085 PF01903 CbiX CQJ30_05090 PF14306 PUA-like domain CQJ30_05090 PF01747 ATP-sulfurylase CQJ30_05100 PF04715 Anthranilate synthase component I, N terminal region CQJ30_05100 PF00425 chorismate binding enzyme CQJ30_05105 PF00591 Glycosyl transferase family, a/b domain CQJ30_05105 PF02885 Glycosyl transferase family, helical bundle domain CQJ30_05105 PF00117 Glutamine amidotransferase class-I CQJ30_05110 PF00591 Glycosyl transferase family, a/b domain CQJ30_05110 PF02885 Glycosyl transferase family, helical bundle domain CQJ30_05115 PF00218 Indole-3-glycerol phosphate synthase CQJ30_05120 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase CQJ30_05125 PF00291 Pyridoxal-phosphate dependent enzyme CQJ30_05130 PF00290 Tryptophan synthase alpha chain CQJ30_05135 PF01174 SNO glutamine amidotransferase family CQJ30_05140 PF01680 SOR/SNZ family CQJ30_05145 PF00392 Bacterial regulatory proteins, gntR family CQJ30_05145 PF00155 Aminotransferase class I and II CQJ30_05165 PF00271 Helicase conserved C-terminal domain CQJ30_05165 PF00270 DEAD/DEAH box helicase CQJ30_05170 PF07690 Major Facilitator Superfamily CQJ30_05175 PF00892 EamA-like transporter family CQJ30_05180 PF01545 Cation efflux family CQJ30_05180 PF16916 Dimerisation domain of Zinc Transporter CQJ30_05185 PF01040 UbiA prenyltransferase family CQJ30_05190 PF17922 Tetracyclin repressor-like, C-terminal domain CQJ30_05190 PF00440 Bacterial regulatory proteins, tetR family CQJ30_05200 PF07690 Major Facilitator Superfamily CQJ30_05210 PF00005 ABC transporter CQJ30_05210 PF00571 CBS domain CQJ30_05215 PF00528 Binding-protein-dependent transport system inner membrane component CQJ30_05220 PF14501 GHKL domain CQJ30_05225 PF00248 Aldo/keto reductase family CQJ30_05230 PF01047 MarR family CQJ30_05235 PF00004 ATPase family associated with various cellular activities (AAA) CQJ30_05235 PF06480 FtsH Extracellular CQJ30_05235 PF01434 Peptidase family M41 CQJ30_05235 PF17862 AAA+ lid domain CQJ30_05240 PF07739 TipAS antibiotic-recognition domain CQJ30_05240 PF13411 MerR HTH family regulatory protein CQJ30_05245 PF02322 Cytochrome bd terminal oxidase subunit II CQJ30_05250 PF01654 Cytochrome bd terminal oxidase subunit I CQJ30_05255 PF00753 Metallo-beta-lactamase superfamily CQJ30_05255 PF16123 Hydroxyacylglutathione hydrolase C-terminus CQJ30_05260 PF01654 Cytochrome bd terminal oxidase subunit I CQJ30_05265 PF02322 Cytochrome bd terminal oxidase subunit II CQJ30_05270 PF00664 ABC transporter transmembrane region CQJ30_05270 PF00005 ABC transporter CQJ30_05275 PF00005 ABC transporter CQJ30_05275 PF00664 ABC transporter transmembrane region CQJ30_05285 PF01497 Periplasmic binding protein CQJ30_05290 PF07685 CobB/CobQ-like glutamine amidotransferase domain CQJ30_05290 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain CQJ30_05295 PF00069 Protein kinase domain CQJ30_05305 PF12849 PBP superfamily domain CQJ30_05310 PF00528 Binding-protein-dependent transport system inner membrane component CQJ30_05315 PF00528 Binding-protein-dependent transport system inner membrane component CQJ30_05320 PF00005 ABC transporter CQJ30_05325 PF06719 AraC-type transcriptional regulator N-terminus CQJ30_05325 PF12833 Helix-turn-helix domain CQJ30_05335 PF01261 Xylose isomerase-like TIM barrel CQJ30_05340 PF02894 Oxidoreductase family, C-terminal alpha/beta domain CQJ30_05340 PF01408 Oxidoreductase family, NAD-binding Rossmann fold CQJ30_05350 PF02894 Oxidoreductase family, C-terminal alpha/beta domain CQJ30_05350 PF01408 Oxidoreductase family, NAD-binding Rossmann fold CQJ30_05360 PF01235 Sodium:alanine symporter family CQJ30_05375 PF02631 RecX family CQJ30_05380 PF08838 Protein of unknown function (DUF1811) CQJ30_05385 PF08176 Small acid-soluble spore protein K family CQJ30_05390 PF04307 LexA-binding, inner membrane-associated putative hydrolase CQJ30_05395 PF14815 NUDIX domain CQJ30_05395 PF00730 HhH-GPD superfamily base excision DNA repair protein CQJ30_05410 PF04167 Protein of unknown function (DUF402) CQJ30_05415 PF00005 ABC transporter CQJ30_05415 PF00664 ABC transporter transmembrane region CQJ30_05420 PF01168 Alanine racemase, N-terminal domain CQJ30_05425 PF08543 Phosphomethylpyrimidine kinase CQJ30_05430 PF06081 Aromatic acid exporter family member 1 CQJ30_05435 PF07885 Ion channel CQJ30_05440 PF00578 AhpC/TSA family CQJ30_05445 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CQJ30_05450 PF01923 Cobalamin adenosyltransferase CQJ30_05455 PF01475 Ferric uptake regulator family CQJ30_05460 PF11023 Zinc-ribbon containing domain CQJ30_05465 PF18576 Helix-turn-helix domain CQJ30_05465 PF14540 Nucleotidyltransferase-like CQJ30_05570 PF01695 IstB-like ATP binding protein CQJ30_05575 PF02796 Helix-turn-helix domain of resolvase CQJ30_05575 PF00665 Integrase core domain CQJ30_05580 PF07563 Protein of unknown function (DUF1541) CQJ30_05590 PF00072 Response regulator receiver domain CQJ30_05595 PF00501 AMP-binding enzyme CQJ30_05595 PF13193 AMP-binding enzyme C-terminal domain CQJ30_05600 PF04542 Sigma-70 region 2 CQJ30_05600 PF08281 Sigma-70, region 4 CQJ30_05610 PF02667 Short chain fatty acid transporter CQJ30_05630 PF08279 HTH domain CQJ30_05630 PF13280 WYL domain CQJ30_05660 PF01047 MarR family CQJ30_05690 PF07517 SecA DEAD-like domain CQJ30_05690 PF01043 SecA preprotein cross-linking domain CQJ30_05690 PF07516 SecA Wing and Scaffold domain CQJ30_05690 PF02810 SEC-C motif CQJ30_05710 PF02384 N-6 DNA Methylase CQJ30_05715 PF02229 Transcriptional Coactivator p15 (PC4) CQJ30_05725 PF02554 Carbon starvation protein CstA CQJ30_05730 PF00581 Rhodanese-like domain CQJ30_05735 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CQJ30_05735 PF07992 Pyridine nucleotide-disulphide oxidoreductase CQJ30_05740 PF02583 Metal-sensitive transcriptional repressor CQJ30_05745 PF00581 Rhodanese-like domain CQJ30_05755 PF00271 Helicase conserved C-terminal domain CQJ30_05755 PF00570 HRDC domain CQJ30_05755 PF00270 DEAD/DEAH box helicase CQJ30_05755 PF09382 RQC domain CQJ30_05755 PF16124 RecQ zinc-binding CQJ30_05760 PF00672 HAMP domain CQJ30_05760 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CQJ30_05775 PF00486 Transcriptional regulatory protein, C terminal CQJ30_05775 PF00072 Response regulator receiver domain CQJ30_05780 PF00672 HAMP domain CQJ30_05780 PF00512 His Kinase A (phospho-acceptor) domain CQJ30_05780 PF18698 Histidine kinase sensor domain CQJ30_05780 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CQJ30_05780 PF00989 PAS fold CQJ30_05795 PF02535 ZIP Zinc transporter CQJ30_05800 PF01026 TatD related DNase CQJ30_05810 PF00486 Transcriptional regulatory protein, C terminal CQJ30_05810 PF00072 Response regulator receiver domain CQJ30_05815 PF16736 Single Cache-like CQJ30_05815 PF00989 PAS fold CQJ30_05815 PF00512 His Kinase A (phospho-acceptor) domain CQJ30_05815 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CQJ30_05825 PF00149 Calcineurin-like phosphoesterase CQJ30_05825 PF12320 Type 5 capsule protein repressor C-terminal domain CQJ30_05830 PF13476 AAA domain CQJ30_05840 PF01209 ubiE/COQ5 methyltransferase family CQJ30_05845 PF00893 Small Multidrug Resistance protein CQJ30_05850 PF00893 Small Multidrug Resistance protein CQJ30_05865 PF13529 Peptidase_C39 like family CQJ30_05880 PF08141 Small acid-soluble spore protein H family CQJ30_05885 PF00571 CBS domain CQJ30_05890 PF13520 Amino acid permease CQJ30_05920 PF06628 Catalase-related immune-responsive CQJ30_05920 PF00199 Catalase CQJ30_05920 PF18011 C-terminal domain found in long catalases CQJ30_05925 PF10990 Protein of unknown function (DUF2809) CQJ30_05945 PF00005 ABC transporter CQJ30_05955 PF01425 Amidase CQJ30_05970 PF12849 PBP superfamily domain CQJ30_05975 PF00528 Binding-protein-dependent transport system inner membrane component CQJ30_05980 PF00528 Binding-protein-dependent transport system inner membrane component CQJ30_05990 PF01895 PhoU domain CQJ30_05995 PF03741 Integral membrane protein TerC family CQJ30_06000 PF00005 ABC transporter CQJ30_06000 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CQJ30_06005 PF00005 ABC transporter CQJ30_06005 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CQJ30_06010 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CQJ30_06015 PF00528 Binding-protein-dependent transport system inner membrane component CQJ30_06020 PF12911 N-terminal TM domain of oligopeptide transport permease C CQJ30_06020 PF00528 Binding-protein-dependent transport system inner membrane component CQJ30_06030 PF00440 Bacterial regulatory proteins, tetR family CQJ30_06030 PF18665 Tetracyclin repressor-like, C-terminal domain CQJ30_06035 PF17340 Family of unknown function (DUF5370) CQJ30_06065 PF17334 Minor curli fiber component A CQJ30_06075 PF04284 Protein of unknown function (DUF441) CQJ30_06080 PF09680 Family of unknown function CQJ30_06085 PF07739 TipAS antibiotic-recognition domain CQJ30_06085 PF13411 MerR HTH family regulatory protein CQJ30_06090 PF05746 DALR anticodon binding domain CQJ30_06090 PF03485 Arginyl tRNA synthetase N terminal domain CQJ30_06090 PF00750 tRNA synthetases class I (R) CQJ30_06095 PF00724 NADH:flavin oxidoreductase / NADH oxidase family CQJ30_06105 PF01032 FecCD transport family CQJ30_06110 PF01032 FecCD transport family CQJ30_06115 PF00005 ABC transporter CQJ30_06120 PF01497 Periplasmic binding protein CQJ30_06130 PF10282 Lactonase, 7-bladed beta-propeller CQJ30_06135 PF00854 POT family CQJ30_06145 PF00248 Aldo/keto reductase family CQJ30_06150 PF00849 RNA pseudouridylate synthase CQJ30_06150 PF01479 S4 domain CQJ30_06155 PF17326 Family of unknown function (DUF5365) CQJ30_06160 PF06908 YspA SLOG family CQJ30_06170 PF02600 Disulfide bond formation protein DsbB CQJ30_06175 PF14148 YhdB-like protein CQJ30_06185 PF03466 LysR substrate binding domain CQJ30_06185 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CQJ30_06215 PF07729 FCD domain CQJ30_06215 PF00392 Bacterial regulatory proteins, gntR family CQJ30_06220 PF02754 Cysteine-rich domain CQJ30_06225 PF11870 Domain of unknown function (DUF3390) CQJ30_06225 PF13183 4Fe-4S dicluster domain CQJ30_06225 PF02589 LUD domain CQJ30_06230 PF02589 LUD domain CQJ30_06240 PF07690 Major Facilitator Superfamily CQJ30_06245 PF13091 PLD-like domain CQJ30_06245 PF13396 Phospholipase_D-nuclease N-terminal CQJ30_06250 PF13426 PAS domain CQJ30_06250 PF13188 PAS domain CQJ30_06250 PF00989 PAS fold CQJ30_06250 PF00512 His Kinase A (phospho-acceptor) domain CQJ30_06250 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CQJ30_06255 PF02416 mttA/Hcf106 family CQJ30_06260 PF00269 Small, acid-soluble spore proteins, alpha/beta type CQJ30_06275 PF14398 YheC/D like ATP-grasp CQJ30_06280 PF04286 Protein of unknown function (DUF445) CQJ30_06285 PF06133 Control of competence regulator ComK, YlbF/YmcA CQJ30_06295 PF00501 AMP-binding enzyme CQJ30_06295 PF13193 AMP-binding enzyme C-terminal domain CQJ30_06300 PF07849 Protein of unknown function (DUF1641) CQJ30_06305 PF07992 Pyridine nucleotide-disulphide oxidoreductase CQJ30_06315 PF00149 Calcineurin-like phosphoesterase CQJ30_06320 PF13514 AAA domain CQJ30_06325 PF01966 HD domain CQJ30_06335 PF05698 Bacterial trigger factor protein (TF) C-terminus CQJ30_06355 PF08963 Protein of unknown function (DUF1878) CQJ30_06360 PF01047 MarR family CQJ30_06365 PF17099 Tryptophan transporter TrpP CQJ30_06370 PF01230 HIT domain CQJ30_06375 PF00005 ABC transporter CQJ30_06380 PF05975 Bacterial ABC transporter protein EcsB CQJ30_06385 PF12787 EcsC protein family CQJ30_06390 PF07687 Peptidase dimerisation domain CQJ30_06390 PF01546 Peptidase family M20/M25/M40 CQJ30_06400 PF01208 Uroporphyrinogen decarboxylase (URO-D) CQJ30_06410 PF14149 YhfH-like protein CQJ30_06415 PF12706 Beta-lactamase superfamily domain CQJ30_06420 PF03099 Biotin/lipoate A/B protein ligase family CQJ30_06420 PF10437 Bacterial lipoate protein ligase C-terminus CQJ30_06440 PF16491 CAAX prenyl protease N-terminal, five membrane helices CQJ30_06440 PF01435 Peptidase family M48 CQJ30_06450 PF06338 ComK protein CQJ30_06460 PF09335 SNARE associated Golgi protein CQJ30_06465 PF13361 UvrD-like helicase C-terminal domain CQJ30_06465 PF12705 PD-(D/E)XK nuclease superfamily CQJ30_06470 PF00580 UvrD/REP helicase N-terminal domain CQJ30_06470 PF12705 PD-(D/E)XK nuclease superfamily CQJ30_06470 PF13361 UvrD-like helicase C-terminal domain CQJ30_06475 PF10676 Spore germination protein gerPA/gerPF CQJ30_06490 PF10737 Spore germination protein GerPC CQJ30_06495 PF10803 Spore germination GerPB CQJ30_06515 PF07457 Protein of unknown function (DUF1516) CQJ30_06525 PF00563 EAL domain CQJ30_06525 PF00990 Diguanylate cyclase, GGDEF domain CQJ30_06525 PF03707 Bacterial signalling protein N terminal repeat CQJ30_06535 PF01373 Glycosyl hydrolase family 14 CQJ30_06535 PF03423 Carbohydrate binding domain (family 25) CQJ30_06535 PF00128 Alpha amylase, catalytic domain CQJ30_06540 PF04461 Protein of unknown function (DUF520) CQJ30_06550 PF02645 Uncharacterised protein, DegV family COG1307 CQJ30_06555 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 CQJ30_06555 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) CQJ30_06560 PF12758 Protein of unknown function (DUF3813) CQJ30_06570 PF00326 Prolyl oligopeptidase family CQJ30_06575 PF01883 Iron-sulfur cluster assembly protein CQJ30_06580 PF14168 YjzC-like protein CQJ30_06600 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal CQJ30_06600 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III CQJ30_06605 PF02801 Beta-ketoacyl synthase, C-terminal domain CQJ30_06605 PF00109 Beta-ketoacyl synthase, N-terminal domain CQJ30_06610 PF12227 Protein of unknown function (DUF3603) CQJ30_06620 PF00579 tRNA synthetases class I (W and Y) CQJ30_06625 PF03960 ArsC family CQJ30_06630 PF05389 Negative regulator of genetic competence (MecA) CQJ30_06635 PF06054 Competence protein CoiA-like family CQJ30_06640 PF08439 Oligopeptidase F CQJ30_06640 PF01432 Peptidase family M3 CQJ30_06655 PF01152 Bacterial-like globin CQJ30_06660 PF01464 Transglycosylase SLT domain CQJ30_06665 PF01928 CYTH domain CQJ30_06670 PF04607 Region found in RelA / SpoT proteins CQJ30_06675 PF01513 ATP-NAD kinase CQJ30_06680 PF00849 RNA pseudouridylate synthase CQJ30_06685 PF00149 Calcineurin-like phosphoesterase CQJ30_06695 PF12728 Helix-turn-helix domain CQJ30_06695 PF02661 Fic/DOC family CQJ30_06715 PF07098 Protein of unknown function (DUF1360) CQJ30_06730 PF02350 UDP-N-acetylglucosamine 2-epimerase CQJ30_06735 PF02719 Polysaccharide biosynthesis protein CQJ30_06750 PF00535 Glycosyl transferase family 2 CQJ30_06760 PF03862 SpoVAC/SpoVAEB sporulation membrane protein CQJ30_06765 PF07451 Stage V sporulation protein AD (SpoVAD) CQJ30_06770 PF03862 SpoVAC/SpoVAEB sporulation membrane protein CQJ30_06780 PF14069 Stage VI sporulation protein F CQJ30_06790 PF13673 Acetyltransferase (GNAT) domain CQJ30_06800 PF00756 Putative esterase CQJ30_06805 PF17783 CvfB-like winged helix domain CQJ30_06805 PF13509 S1 domain CQJ30_06810 PF02833 DHHA2 domain CQJ30_06810 PF01368 DHH family CQJ30_06815 PF05525 Branched-chain amino acid transport protein CQJ30_06840 PF07690 Major Facilitator Superfamily CQJ30_06860 PF02535 ZIP Zinc transporter CQJ30_06870 PF00872 Transposase, Mutator family CQJ30_06875 PF06146 Phosphate-starvation-inducible E CQJ30_06880 PF13302 Acetyltransferase (GNAT) domain CQJ30_06885 PF01565 FAD binding domain CQJ30_06885 PF02913 FAD linked oxidases, C-terminal domain CQJ30_06895 PF00881 Nitroreductase family CQJ30_06900 PF00171 Aldehyde dehydrogenase family CQJ30_06905 PF01817 Chorismate mutase type II CQJ30_06905 PF00793 DAHP synthetase I family CQJ30_06910 PF02153 Prephenate dehydrogenase CQJ30_06910 PF01842 ACT domain CQJ30_06915 PF00135 Carboxylesterase family CQJ30_06925 PF12652 CotJB protein CQJ30_06930 PF05067 Manganese containing catalase CQJ30_06935 PF00455 DeoR C terminal sensor domain CQJ30_06935 PF08220 DeoR-like helix-turn-helix domain CQJ30_06940 PF00294 pfkB family carbohydrate kinase CQJ30_06945 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CQJ30_06945 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CQJ30_06960 PF07690 Major Facilitator Superfamily CQJ30_06975 PF01613 Flavin reductase like domain CQJ30_06980 PF01042 Endoribonuclease L-PSP CQJ30_07000 PF00696 Amino acid kinase family CQJ30_07000 PF01472 PUA domain CQJ30_07005 PF00171 Aldehyde dehydrogenase family CQJ30_07020 PF00465 Iron-containing alcohol dehydrogenase CQJ30_07025 PF00392 Bacterial regulatory proteins, gntR family CQJ30_07030 PF00005 ABC transporter CQJ30_07045 PF13193 AMP-binding enzyme C-terminal domain CQJ30_07045 PF00501 AMP-binding enzyme CQJ30_07050 PF01521 Iron-sulphur cluster biosynthesis CQJ30_07055 PF00478 IMP dehydrogenase / GMP reductase domain CQJ30_07060 PF01262 Alanine dehydrogenase/PNT, C-terminal domain CQJ30_07060 PF05222 Alanine dehydrogenase/PNT, N-terminal domain CQJ30_07065 PF13520 Amino acid permease CQJ30_07080 PF10026 Predicted Zn-dependent protease (DUF2268) CQJ30_07100 PF16657 Maltogenic Amylase, C-terminal domain CQJ30_07100 PF00128 Alpha amylase, catalytic domain CQJ30_07100 PF00128 Alpha amylase, catalytic domain CQJ30_07100 PF16657 Maltogenic Amylase, C-terminal domain CQJ30_07115 PF13361 UvrD-like helicase C-terminal domain CQJ30_07115 PF00580 UvrD/REP helicase N-terminal domain CQJ30_07120 PF00990 Diguanylate cyclase, GGDEF domain CQJ30_07125 PF00440 Bacterial regulatory proteins, tetR family CQJ30_07125 PF17932 Tetracyclin repressor-like, C-terminal domain CQJ30_07135 PF00005 ABC transporter CQJ30_07145 PF13378 Enolase C-terminal domain-like CQJ30_07145 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain CQJ30_07160 PF13460 NAD(P)H-binding CQJ30_07205 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) CQJ30_07205 PF04851 Type III restriction enzyme, res subunit CQJ30_07205 PF00271 Helicase conserved C-terminal domain CQJ30_07205 PF08463 EcoEI R protein C-terminal CQJ30_07210 PF05525 Branched-chain amino acid transport protein CQJ30_07215 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CQJ30_07215 PF00672 HAMP domain CQJ30_07215 PF02743 Cache domain CQJ30_07225 PF00271 Helicase conserved C-terminal domain CQJ30_07225 PF04434 SWIM zinc finger CQJ30_07225 PF00176 SNF2 family N-terminal domain CQJ30_07245 PF00005 ABC transporter CQJ30_07245 PF16326 ABC transporter C-terminal domain CQJ30_07245 PF12848 ABC transporter CQJ30_07255 PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) CQJ30_07260 PF08240 Alcohol dehydrogenase GroES-like domain CQJ30_07260 PF00107 Zinc-binding dehydrogenase CQJ30_07265 PF00171 Aldehyde dehydrogenase family CQJ30_07270 PF00158 Sigma-54 interaction domain CQJ30_07270 PF00072 Response regulator receiver domain CQJ30_07270 PF02954 Bacterial regulatory protein, Fis family CQJ30_07275 PF13188 PAS domain CQJ30_07275 PF00512 His Kinase A (phospho-acceptor) domain CQJ30_07275 PF13426 PAS domain CQJ30_07275 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CQJ30_07275 PF00989 PAS fold CQJ30_07280 PF00465 Iron-containing alcohol dehydrogenase CQJ30_07285 PF03737 Aldolase/RraA CQJ30_07295 PF01476 LysM domain CQJ30_07295 PF00877 NlpC/P60 family CQJ30_07305 PF01521 Iron-sulphur cluster biosynthesis CQJ30_07310 PF07690 Major Facilitator Superfamily CQJ30_07325 PF00107 Zinc-binding dehydrogenase CQJ30_07325 PF08240 Alcohol dehydrogenase GroES-like domain CQJ30_07345 PF10997 Alternate to MurJ CQJ30_07360 PF03845 Spore germination protein CQJ30_07365 PF05504 Spore germination B3/ GerAC like, C-terminal CQJ30_07370 PF03323 Bacillus/Clostridium GerA spore germination protein CQJ30_07380 PF00565 Staphylococcal nuclease homologue CQJ30_07385 PF00009 Elongation factor Tu GTP binding domain CQJ30_07385 PF03144 Elongation factor Tu domain 2 CQJ30_07385 PF16658 Class II release factor RF3, C-terminal domain CQJ30_07390 PF03741 Integral membrane protein TerC family CQJ30_07395 PF00269 Small, acid-soluble spore proteins, alpha/beta type CQJ30_07400 PF02386 Cation transport protein CQJ30_07405 PF13529 Peptidase_C39 like family CQJ30_07410 PF13537 Glutamine amidotransferase domain CQJ30_07410 PF00733 Asparagine synthase CQJ30_07415 PF01757 Acyltransferase family CQJ30_07425 PF17871 AAA lid domain CQJ30_07425 PF10431 C-terminal, D2-small domain, of ClpB protein CQJ30_07425 PF07724 AAA domain (Cdc48 subfamily) CQJ30_07425 PF00004 ATPase family associated with various cellular activities (AAA) CQJ30_07440 PF09953 Uncharacterized protein conserved in bacteria (DUF2187) CQJ30_07450 PF07486 Cell Wall Hydrolase CQJ30_07460 PF00381 PTS HPr component phosphorylation site CQJ30_07465 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase CQJ30_07465 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase CQJ30_07470 PF00155 Aminotransferase class I and II CQJ30_07475 PF01584 CheW-like domain CQJ30_07480 PF14177 YkyB-like protein CQJ30_07485 PF00149 Calcineurin-like phosphoesterase CQJ30_07485 PF10518 TAT (twin-arginine translocation) pathway signal sequence CQJ30_07495 PF08796 Protein of unknown function (DUF1797) CQJ30_07505 PF03466 LysR substrate binding domain CQJ30_07505 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CQJ30_07510 PF08503 Tetrahydrodipicolinate succinyltransferase N-terminal CQJ30_07510 PF14602 Hexapeptide repeat of succinyl-transferase CQJ30_07510 PF00132 Bacterial transferase hexapeptide (six repeats) CQJ30_07515 PF01546 Peptidase family M20/M25/M40 CQJ30_07515 PF07687 Peptidase dimerisation domain CQJ30_07520 PF02254 TrkA-N domain CQJ30_07520 PF02080 TrkA-C domain CQJ30_07525 PF00753 Metallo-beta-lactamase superfamily CQJ30_07525 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain CQJ30_07525 PF17770 Ribonuclease J C-terminal domain CQJ30_07535 PF01327 Polypeptide deformylase CQJ30_07545 PF00676 Dehydrogenase E1 component CQJ30_07550 PF02780 Transketolase, C-terminal domain CQJ30_07550 PF02779 Transketolase, pyrimidine binding domain CQJ30_07555 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) CQJ30_07555 PF00364 Biotin-requiring enzyme CQJ30_07555 PF02817 e3 binding domain CQJ30_07560 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CQJ30_07560 PF07992 Pyridine nucleotide-disulphide oxidoreductase CQJ30_07565 PF13790 SR1 protein CQJ30_07570 PF03060 Nitronate monooxygenase CQJ30_07575 PF05256 Uncharacterised protein family (UPF0223) CQJ30_07580 PF06335 Protein of unknown function (DUF1054) CQJ30_07585 PF00459 Inositol monophosphatase family CQJ30_07600 PF14036 YlaH-like protein CQJ30_07605 PF09963 Uncharacterized protein conserved in bacteria (DUF2197) CQJ30_07610 PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) CQJ30_07620 PF07408 Protein of unknown function (DUF1507) CQJ30_07625 PF01098 Cell cycle protein CQJ30_07630 PF02436 Conserved carboxylase domain CQJ30_07630 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain CQJ30_07630 PF00289 Biotin carboxylase, N-terminal domain CQJ30_07630 PF02785 Biotin carboxylase C-terminal domain CQJ30_07630 PF00682 HMGL-like CQJ30_07630 PF00364 Biotin-requiring enzyme CQJ30_07635 PF02628 Cytochrome oxidase assembly protein CQJ30_07640 PF01040 UbiA prenyltransferase family CQJ30_07645 PF00116 Cytochrome C oxidase subunit II, periplasmic domain CQJ30_07645 PF02790 Cytochrome C oxidase subunit II, transmembrane domain CQJ30_07645 PF00034 Cytochrome c CQJ30_07650 PF00115 Cytochrome C and Quinol oxidase polypeptide I CQJ30_07655 PF00510 Cytochrome c oxidase subunit III CQJ30_07660 PF03626 Prokaryotic Cytochrome C oxidase subunit IV CQJ30_07665 PF09678 Cytochrome c oxidase caa3 assembly factor (Caa3_CtaG) CQJ30_07675 PF08868 YugN-like family CQJ30_07680 PF14504 CAP-associated N-terminal CQJ30_07680 PF00188 Cysteine-rich secretory protein family CQJ30_07685 PF14071 Putative coat protein CQJ30_07690 PF14003 YlbE-like protein CQJ30_07695 PF06133 Control of competence regulator ComK, YlbF/YmcA CQJ30_07715 PF01467 Cytidylyltransferase-like CQJ30_07720 PF07670 Nucleoside recognition CQJ30_07725 PF01734 Patatin-like phospholipase CQJ30_07730 PF13180 PDZ domain CQJ30_07730 PF05362 Lon protease (S16) C-terminal proteolytic domain CQJ30_07735 PF05636 HIGH Nucleotidyl Transferase CQJ30_07740 PF02620 Large ribosomal RNA subunit accumulation protein YceD CQJ30_07745 PF01783 Ribosomal L32p protein family CQJ30_07755 PF00583 Acetyltransferase (GNAT) family CQJ30_07760 PF02558 Ketopantoate reductase PanE/ApbA CQJ30_07760 PF08546 Ketopantoate reductase PanE/ApbA C terminal CQJ30_07770 PF10079 Bacillithiol biosynthesis BshC CQJ30_07775 PF02381 MraZ protein, putative antitoxin-like CQJ30_07780 PF01795 MraW methylase family CQJ30_07795 PF00905 Penicillin binding protein transpeptidase domain CQJ30_07795 PF03717 Penicillin-binding Protein dimerisation domain CQJ30_07795 PF03793 PASTA domain CQJ30_07800 PF01225 Mur ligase family, catalytic domain CQJ30_07800 PF02875 Mur ligase family, glutamate ligase domain CQJ30_07800 PF08245 Mur ligase middle domain CQJ30_07805 PF00953 Glycosyl transferase family 4 CQJ30_07810 PF08245 Mur ligase middle domain CQJ30_07810 PF02875 Mur ligase family, glutamate ligase domain CQJ30_07815 PF01098 Cell cycle protein CQJ30_07820 PF04101 Glycosyltransferase family 28 C-terminal domain CQJ30_07820 PF03033 Glycosyltransferase family 28 N-terminal domain CQJ30_07825 PF08478 POTRA domain, FtsQ-type CQJ30_07830 PF05949 Bacterial protein of unknown function (DUF881) CQJ30_07835 PF05949 Bacterial protein of unknown function (DUF881) CQJ30_07840 PF06947 Protein of unknown function (DUF1290) CQJ30_07845 PF02491 SHS2 domain inserted in FTSA CQJ30_07850 PF00091 Tubulin/FtsZ family, GTPase domain CQJ30_07850 PF12327 FtsZ family, C-terminal domain CQJ30_07855 PF03419 Sporulation factor SpoIIGA CQJ30_07860 PF04542 Sigma-70 region 2 CQJ30_07860 PF04545 Sigma-70, region 4 CQJ30_07865 PF04542 Sigma-70 region 2 CQJ30_07865 PF04539 Sigma-70 region 3 CQJ30_07865 PF04545 Sigma-70, region 4 CQJ30_07875 PF01168 Alanine racemase, N-terminal domain CQJ30_07880 PF04472 Cell division protein SepF CQJ30_07885 PF02325 YGGT family CQJ30_07890 PF01479 S4 domain CQJ30_07890 PF17774 Putative RNA-binding domain in YlmH CQJ30_07895 PF05103 DivIVA protein CQJ30_07905 PF00133 tRNA synthetases class I (I, L, M and V) CQJ30_07905 PF08264 Anticodon-binding domain of tRNA CQJ30_07905 PF06827 Zinc finger found in FPG and IleRS CQJ30_07915 PF01252 Signal peptidase (SPase) II CQJ30_07920 PF01479 S4 domain CQJ30_07920 PF00849 RNA pseudouridylate synthase CQJ30_07925 PF00156 Phosphoribosyl transferase domain CQJ30_07930 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain CQJ30_07930 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain CQJ30_07935 PF01979 Amidohydrolase family CQJ30_07940 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain CQJ30_07940 PF00117 Glutamine amidotransferase class-I CQJ30_07945 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain CQJ30_07945 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain CQJ30_07945 PF02142 MGS-like domain CQJ30_07950 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B CQJ30_07950 PF00970 Oxidoreductase FAD-binding domain CQJ30_07955 PF01180 Dihydroorotate dehydrogenase CQJ30_07960 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family CQJ30_07965 PF00156 Phosphoribosyl transferase domain CQJ30_07975 PF00689 Cation transporting ATPase, C-terminus CQJ30_07975 PF00690 Cation transporter/ATPase, N-terminus CQJ30_07980 PF03755 YicC-like family, N-terminal region CQJ30_07980 PF08340 Domain of unknown function (DUF1732) CQJ30_07985 PF00625 Guanylate kinase CQJ30_07990 PF01192 RNA polymerase Rpb6 CQJ30_07995 PF02441 Flavoprotein CQJ30_07995 PF04127 DNA / pantothenate metabolism flavoprotein CQJ30_08000 PF17764 3′ DNA-binding domain (3′BD) CQJ30_08000 PF00271 Helicase conserved C-terminal domain CQJ30_08000 PF04851 Type III restriction enzyme, res subunit CQJ30_08000 PF18319 PriA DNA helicase Cys-rich region (CRR) domain CQJ30_08000 PF18074 Primosomal protein N C-terminal domain CQJ30_08005 PF00551 Formyl transferase CQJ30_08005 PF02911 Formyl transferase, C-terminal domain CQJ30_08010 PF01189 16S rRNA methyltransferase RsmB/F CQJ30_08010 PF01029 NusB family CQJ30_08020 PF03793 PASTA domain CQJ30_08020 PF00069 Protein kinase domain CQJ30_08025 PF03193 RsgA GTPase CQJ30_08025 PF16745 RsgA N-terminal domain CQJ30_08030 PF00834 Ribulose-phosphate 3 epimerase family CQJ30_08035 PF04265 Thiamin pyrophosphokinase, vitamin B1 binding domain CQJ30_08035 PF04263 Thiamin pyrophosphokinase, catalytic domain CQJ30_08040 PF08183 Stage V sporulation protein family CQJ30_08045 PF00830 Ribosomal L28 family CQJ30_08050 PF03780 Asp23 family, cell envelope-related function CQJ30_08055 PF02734 DAK2 domain CQJ30_08055 PF13684 Dihydroxyacetone kinase family CQJ30_08060 PF01842 ACT domain CQJ30_08060 PF03315 Serine dehydratase beta chain CQJ30_08065 PF03313 Serine dehydratase alpha chain CQJ30_08070 PF17191 RecG wedge domain CQJ30_08070 PF00271 Helicase conserved C-terminal domain CQJ30_08070 PF00270 DEAD/DEAH box helicase CQJ30_08075 PF08279 HTH domain CQJ30_08075 PF01575 MaoC like domain CQJ30_08080 PF02504 Fatty acid synthesis protein CQJ30_08085 PF00698 Acyl transferase domain CQJ30_08095 PF00550 Phosphopantetheine attachment site CQJ30_08100 PF14622 Ribonuclease-III-like CQJ30_08100 PF00035 Double-stranded RNA binding motif CQJ30_08105 PF06470 SMC proteins Flexible Hinge Domain CQJ30_08105 PF02463 RecF/RecN/SMC N terminal domain CQJ30_08110 PF00448 SRP54-type protein, GTPase domain CQJ30_08110 PF02881 SRP54-type protein, helical bundle domain CQJ30_08115 PF04297 Putative helix-turn-helix protein, YlxM / p13 like CQJ30_08120 PF02978 Signal peptide binding domain CQJ30_08120 PF02881 SRP54-type protein, helical bundle domain CQJ30_08120 PF00448 SRP54-type protein, GTPase domain CQJ30_08125 PF00886 Ribosomal protein S16 CQJ30_08135 PF11068 YlqD protein CQJ30_08140 PF05239 PRC-barrel domain CQJ30_08140 PF01782 RimM N-terminal domain CQJ30_08145 PF01746 tRNA (Guanine-1)-methyltransferase CQJ30_08150 PF01245 Ribosomal protein L19 CQJ30_08155 PF10502 Signal peptidase, peptidase S26 CQJ30_08160 PF01926 50S ribosome-binding GTPase CQJ30_08165 PF01351 Ribonuclease HII CQJ30_08175 PF01312 FlhB HrpN YscU SpaS Family CQJ30_08180 PF00549 CoA-ligase CQJ30_08180 PF08442 ATP-grasp domain CQJ30_08185 PF00549 CoA-ligase CQJ30_08185 PF02629 CoA binding domain CQJ30_08190 PF02481 DNA recombination-mediator protein A CQJ30_08195 PF01751 Toprim domain CQJ30_08195 PF01396 Topoisomerase DNA binding C4 zinc finger CQJ30_08195 PF01131 DNA topoisomerase CQJ30_08200 PF02899 Phage integrase, N-terminal SAM-like domain CQJ30_08200 PF00589 Phage integrase family CQJ30_08205 PF00227 Proteasome subunit CQJ30_08210 PF10431 C-terminal, D2-small domain, of ClpB protein CQJ30_08210 PF07724 AAA domain (Cdc48 subfamily) CQJ30_08215 PF06018 CodY GAF-like domain CQJ30_08215 PF08222 CodY helix-turn-helix domain CQJ30_08220 PF00460 Flagella basal body rod protein CQJ30_08225 PF06429 Flagellar basal body rod FlgEFG protein C-terminal CQJ30_08225 PF00460 Flagella basal body rod protein CQJ30_08230 PF02049 Flagellar hook-basal body complex protein FliE CQJ30_08235 PF08345 Flagellar M-ring protein C-terminal CQJ30_08235 PF01514 Secretory protein of YscJ/FliF family CQJ30_08240 PF01706 FliG C-terminal domain CQJ30_08240 PF14841 FliG middle domain CQJ30_08240 PF14842 FliG N-terminal domain CQJ30_08245 PF02108 Flagellar assembly protein FliH CQJ30_08250 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CQJ30_08250 PF02874 ATP synthase alpha/beta family, beta-barrel domain CQJ30_08250 PF18269 T3SS EscN ATPase C-terminal domain CQJ30_08255 PF02050 Flagellar FliJ protein CQJ30_08270 PF03963 Flagellar hook capping protein - N-terminal region CQJ30_08280 PF00460 Flagella basal body rod protein CQJ30_08280 PF06429 Flagellar basal body rod FlgEFG protein C-terminal CQJ30_08285 PF06289 Flagellar and Swarming motility proteins CQJ30_08295 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term CQJ30_08295 PF02154 Flagellar motor switch protein FliM CQJ30_08300 PF04509 CheC-like family CQJ30_08300 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term CQJ30_08305 PF00072 Response regulator receiver domain CQJ30_08310 PF04347 Flagellar biosynthesis protein, FliO CQJ30_08315 PF00813 FliP family CQJ30_08320 PF01313 Bacterial export proteins, family 3 CQJ30_08325 PF01311 Bacterial export proteins, family 1 CQJ30_08330 PF01312 FlhB HrpN YscU SpaS Family CQJ30_08335 PF00771 FHIPEP family CQJ30_08340 PF00448 SRP54-type protein, GTPase domain CQJ30_08345 PF10609 NUBPL iron-transfer P-loop NTPase CQJ30_08350 PF00072 Response regulator receiver domain CQJ30_08350 PF01339 CheB methylesterase CQJ30_08355 PF07194 P2 response regulator binding domain CQJ30_08355 PF01627 Hpt domain CQJ30_08355 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CQJ30_08355 PF02895 Signal transducing histidine kinase, homodimeric domain CQJ30_08355 PF01584 CheW-like domain CQJ30_08360 PF01584 CheW-like domain CQJ30_08365 PF04509 CheC-like family CQJ30_08370 PF03975 CheD chemotactic sensory transduction CQJ30_08375 PF04545 Sigma-70, region 4 CQJ30_08375 PF04539 Sigma-70 region 3 CQJ30_08375 PF04542 Sigma-70 region 2 CQJ30_08390 PF00318 Ribosomal protein S2 CQJ30_08395 PF00889 Elongation factor TS CQJ30_08400 PF00696 Amino acid kinase family CQJ30_08405 PF01765 Ribosome recycling factor CQJ30_08410 PF01255 Putative undecaprenyl diphosphate synthase CQJ30_08420 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain CQJ30_08420 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase CQJ30_08420 PF13288 DXP reductoisomerase C-terminal domain CQJ30_08425 PF13180 PDZ domain CQJ30_08425 PF02163 Peptidase family M50 CQJ30_08430 PF04073 Aminoacyl-tRNA editing domain CQJ30_08430 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CQJ30_08430 PF03129 Anticodon binding domain CQJ30_08440 PF00929 Exonuclease CQJ30_08440 PF14579 Helix-hairpin-helix motif CQJ30_08440 PF17657 Bacterial DNA polymerase III alpha subunit finger domain CQJ30_08440 PF07733 Bacterial DNA polymerase III alpha NTPase domain CQJ30_08440 PF11490 DNA polymerase III polC-type N-terminus II CQJ30_08440 PF14480 DNA polymerase III polC-type N-terminus I CQJ30_08440 PF02811 PHP domain CQJ30_08445 PF17384 RimP C-terminal SH3 domain CQJ30_08445 PF02576 RimP N-terminal domain CQJ30_08450 PF13184 NusA-like KH domain CQJ30_08450 PF00575 S1 RNA binding domain CQJ30_08450 PF08529 NusA N-terminal domain CQJ30_08455 PF04296 Protein of unknown function (DUF448) CQJ30_08460 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family CQJ30_08465 PF11987 Translation-initiation factor 2 CQJ30_08465 PF00009 Elongation factor Tu GTP binding domain CQJ30_08465 PF04760 Translation initiation factor IF-2, N-terminal region CQJ30_08470 PF04456 Protein of unknown function (DUF503) CQJ30_08475 PF02033 Ribosome-binding factor A CQJ30_08480 PF16198 tRNA pseudouridylate synthase B C-terminal domain CQJ30_08480 PF01509 TruB family pseudouridylate synthase (N terminal domain) CQJ30_08485 PF06574 FAD synthetase CQJ30_08485 PF01687 Riboflavin kinase CQJ30_08490 PF00312 Ribosomal protein S15 CQJ30_08495 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain CQJ30_08495 PF00013 KH domain CQJ30_08495 PF00575 S1 RNA binding domain CQJ30_08495 PF03725 3' exoribonuclease family, domain 2 CQJ30_08495 PF01138 3' exoribonuclease family, domain 1 CQJ30_08500 PF01522 Polysaccharide deacetylase CQJ30_08505 PF00675 Insulinase (Peptidase family M16) CQJ30_08505 PF05193 Peptidase M16 inactive domain CQJ30_08510 PF05239 PRC-barrel domain CQJ30_08515 PF16924 Dipicolinate synthase subunit A N-terminal domain CQJ30_08515 PF01262 Alanine dehydrogenase/PNT, C-terminal domain CQJ30_08520 PF02441 Flavoprotein CQJ30_08525 PF02774 Semialdehyde dehydrogenase, dimerisation domain CQJ30_08525 PF01118 Semialdehyde dehydrogenase, NAD binding domain CQJ30_08530 PF00696 Amino acid kinase family CQJ30_08530 PF13840 ACT domain CQJ30_08535 PF00701 Dihydrodipicolinate synthetase family CQJ30_08540 PF00753 Metallo-beta-lactamase superfamily CQJ30_08540 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain CQJ30_08540 PF17770 Ribonuclease J C-terminal domain CQJ30_08545 PF00574 Clp protease CQJ30_08555 PF09397 Ftsk gamma domain CQJ30_08555 PF17854 FtsK alpha domain CQJ30_08555 PF01580 FtsK/SpoIIIE family CQJ30_08580 PF05193 Peptidase M16 inactive domain CQJ30_08585 PF00675 Insulinase (Peptidase family M16) CQJ30_08585 PF05193 Peptidase M16 inactive domain CQJ30_08595 PF11588 Protein of unknown function (DUF3243) CQJ30_08600 PF11868 Protein of unknown function (DUF3388) CQJ30_08605 PF13464 Domain of unknown function (DUF4115) CQJ30_08610 PF01066 CDP-alcohol phosphatidyltransferase CQJ30_08615 PF02464 Competence-damaged protein CQJ30_08615 PF18146 Damage-inducible protein CinA KH domain CQJ30_08615 PF00994 Probable molybdopterin binding domain CQJ30_08630 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 CQJ30_08635 PF00188 Cysteine-rich secretory protein family CQJ30_08645 PF17999 Pullulanase N1-terminal domain CQJ30_08645 PF00128 Alpha amylase, catalytic domain CQJ30_08645 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) CQJ30_08650 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) CQJ30_08650 PF00128 Alpha amylase, catalytic domain CQJ30_08650 PF02806 Alpha amylase, C-terminal all-beta domain CQJ30_08655 PF00483 Nucleotidyl transferase CQJ30_08660 PF00483 Nucleotidyl transferase CQJ30_08665 PF00534 Glycosyl transferases group 1 CQJ30_08665 PF08323 Starch synthase catalytic domain CQJ30_08670 PF00343 Carbohydrate phosphorylase CQJ30_08675 PF11132 Transcriptional regulator protein (SplA) CQJ30_08685 PF10942 Protein of unknown function (DUF2619) CQJ30_08695 PF01022 Bacterial regulatory protein, arsR family CQJ30_08700 PF01545 Cation efflux family CQJ30_08700 PF16916 Dimerisation domain of Zinc Transporter CQJ30_08705 PF02525 Flavodoxin-like fold CQJ30_08710 PF02574 Homocysteine S-methyltransferase CQJ30_08710 PF02219 Methylenetetrahydrofolate reductase CQJ30_08715 PF02574 Homocysteine S-methyltransferase CQJ30_08715 PF02607 B12 binding domain CQJ30_08715 PF02310 B12 binding domain CQJ30_08715 PF02965 Vitamin B12 dependent methionine synthase, activation domain CQJ30_08715 PF00809 Pterin binding enzyme CQJ30_08720 PF00248 Aldo/keto reductase family CQJ30_08725 PF00920 Dehydratase family CQJ30_08740 PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) CQJ30_08745 PF02361 Cobalt transport protein CQJ30_08755 PF00005 ABC transporter CQJ30_08770 PF07301 Protein of unknown function (DUF1453) CQJ30_08790 PF00939 Sodium:sulfate symporter transmembrane region CQJ30_08795 PF03190 Protein of unknown function, DUF255 CQJ30_08800 PF00154 recA bacterial DNA recombination protein CQJ30_08805 PF01966 HD domain CQJ30_08805 PF00013 KH domain CQJ30_08805 PF12072 Domain of unknown function (DUF3552) CQJ30_08810 PF13277 YmdB-like protein CQJ30_08815 PF04232 Stage V sporulation protein S (SpoVS) CQJ30_08820 PF00919 Uncharacterized protein family UPF0004 CQJ30_08820 PF01938 TRAM domain CQJ30_08820 PF04055 Radical SAM superfamily CQJ30_08825 PF06133 Control of competence regulator ComK, YlbF/YmcA CQJ30_08830 PF00149 Calcineurin-like phosphoesterase CQJ30_08835 PF10628 Outer spore coat protein E (CotE) CQJ30_08840 PF00501 AMP-binding enzyme CQJ30_08840 PF13193 AMP-binding enzyme C-terminal domain CQJ30_08845 PF01624 MutS domain I CQJ30_08845 PF00488 MutS domain V CQJ30_08845 PF05190 MutS family domain IV CQJ30_08845 PF05192 MutS domain III CQJ30_08845 PF05188 MutS domain II CQJ30_08850 PF01119 DNA mismatch repair protein, C-terminal domain CQJ30_08850 PF08676 MutL C terminal dimerisation domain CQJ30_08860 PF17209 Hfq protein CQJ30_08865 PF17866 AAA lid domain CQJ30_08865 PF00004 ATPase family associated with various cellular activities (AAA) CQJ30_08870 PF01926 50S ribosome-binding GTPase CQJ30_08870 PF16360 GTP-binding GTPase Middle Region CQJ30_08870 PF13167 GTP-binding GTPase N-terminal CQJ30_08875 PF06838 Methionine gamma-lyase CQJ30_08880 PF13411 MerR HTH family regulatory protein CQJ30_08885 PF00120 Glutamine synthetase, catalytic domain CQJ30_08885 PF03951 Glutamine synthetase, beta-Grasp domain CQJ30_08890 PF01726 LexA DNA binding domain CQJ30_08890 PF00717 Peptidase S24-like CQJ30_08900 PF00239 Resolvase, N terminal domain CQJ30_08905 PF05979 Bacterial protein of unknown function (DUF896) CQJ30_08910 PF10747 Sporulation inhibitor of replication protein SirA CQJ30_08915 PF03672 Uncharacterised protein family (UPF0154) CQJ30_08920 PF00005 ABC transporter CQJ30_08920 PF00664 ABC transporter transmembrane region CQJ30_08925 PF00005 ABC transporter CQJ30_08925 PF00664 ABC transporter transmembrane region CQJ30_08930 PF02683 Cytochrome C biogenesis protein transmembrane region CQJ30_08935 PF00072 Response regulator receiver domain CQJ30_08940 PF11084 Protein of unknown function (DUF2621) CQJ30_08945 PF03630 Fumble CQJ30_08955 PF10502 Signal peptidase, peptidase S26 CQJ30_08960 PF00924 Mechanosensitive ion channel CQJ30_08965 PF09680 Family of unknown function CQJ30_08970 PF03061 Thioesterase superfamily CQJ30_08975 PF00117 Glutamine amidotransferase class-I CQJ30_08975 PF13673 Acetyltransferase (GNAT) domain CQJ30_08975 PF13302 Acetyltransferase (GNAT) domain CQJ30_08975 PF03352 Methyladenine glycosylase CQJ30_08975 PF00958 GMP synthase C terminal domain CQJ30_08985 PF02770 Acyl-CoA dehydrogenase, middle domain CQJ30_08985 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CQJ30_08985 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CQJ30_08995 PF16925 Tetracyclin repressor-like, C-terminal domain CQJ30_08995 PF00440 Bacterial regulatory proteins, tetR family CQJ30_09005 PF04029 2-phosphosulpholactate phosphatase CQJ30_09010 PF00501 AMP-binding enzyme CQJ30_09010 PF13193 AMP-binding enzyme C-terminal domain CQJ30_09015 PF13193 AMP-binding enzyme C-terminal domain CQJ30_09015 PF00501 AMP-binding enzyme CQJ30_09020 PF00501 AMP-binding enzyme CQJ30_09020 PF13193 AMP-binding enzyme C-terminal domain CQJ30_09025 PF00550 Phosphopantetheine attachment site CQJ30_09025 PF14765 Polyketide synthase dehydratase CQJ30_09025 PF08659 KR domain CQJ30_09025 PF02801 Beta-ketoacyl synthase, C-terminal domain CQJ30_09025 PF00698 Acyl transferase domain CQJ30_09025 PF08240 Alcohol dehydrogenase GroES-like domain CQJ30_09025 PF00107 Zinc-binding dehydrogenase CQJ30_09025 PF16197 Ketoacyl-synthetase C-terminal extension CQJ30_09025 PF00109 Beta-ketoacyl synthase, N-terminal domain CQJ30_09040 PF16884 N-terminal domain of oxidoreductase CQJ30_09040 PF00107 Zinc-binding dehydrogenase CQJ30_09050 PF03698 Uncharacterised protein family (UPF0180) CQJ30_09055 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CQJ30_09055 PF02770 Acyl-CoA dehydrogenase, middle domain CQJ30_09055 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CQJ30_09060 PF03435 Saccharopine dehydrogenase NADP binding domain CQJ30_09060 PF16653 Saccharopine dehydrogenase C-terminal domain CQJ30_09065 PF13344 Haloacid dehalogenase-like hydrolase CQJ30_09065 PF00293 NUDIX domain CQJ30_09070 PF00293 NUDIX domain CQJ30_09075 PF04264 YceI-like domain CQJ30_09080 PF01638 HxlR-like helix-turn-helix CQJ30_09085 PF13180 PDZ domain CQJ30_09090 PF09515 Thiamine transporter protein (Thia_YuaJ) CQJ30_09105 PF07687 Peptidase dimerisation domain CQJ30_09105 PF01546 Peptidase family M20/M25/M40 CQJ30_09115 PF08179 Small acid-soluble spore protein P family CQJ30_09130 PF00330 Aconitase family (aconitate hydratase) CQJ30_09130 PF00694 Aconitase C-terminal domain CQJ30_09140 PF08177 Small acid-soluble spore protein N family CQJ30_09150 PF17866 AAA lid domain CQJ30_09150 PF00004 ATPase family associated with various cellular activities (AAA) CQJ30_09155 PF03061 Thioesterase superfamily CQJ30_09165 PF13115 YtkA-like CQJ30_09170 PF02096 60Kd inner membrane protein CQJ30_09180 PF07454 Stage II sporulation protein P (SpoIIP) CQJ30_09185 PF02660 Glycerol-3-phosphate acyltransferase CQJ30_09205 PF13380 CoA binding domain CQJ30_09210 PF00204 DNA gyrase B CQJ30_09210 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CQJ30_09210 PF00986 DNA gyrase B subunit, carboxyl terminus CQJ30_09210 PF01751 Toprim domain CQJ30_09215 PF00521 DNA gyrase/topoisomerase IV, subunit A CQJ30_09215 PF03989 DNA gyrase C-terminal domain, beta-propeller CQJ30_09220 PF02559 CarD-like/TRCF domain CQJ30_09275 PF00300 Histidine phosphatase superfamily (branch 1) CQJ30_09280 PF04134 Protein of unknown function, DUF393 CQJ30_09285 PF02824 TGS domain CQJ30_09285 PF04607 Region found in RelA / SpoT proteins CQJ30_09285 PF13291 ACT domain CQJ30_09295 PF00501 AMP-binding enzyme CQJ30_09295 PF13193 AMP-binding enzyme C-terminal domain CQJ30_09300 PF00183 Hsp90 protein CQJ30_09310 PF02146 Sir2 family CQJ30_09315 PF00171 Aldehyde dehydrogenase family CQJ30_09325 PF00501 AMP-binding enzyme CQJ30_09330 PF00268 Ribonucleotide reductase, small chain CQJ30_09340 PF02803 Thiolase, C-terminal domain CQJ30_09340 PF00108 Thiolase, N-terminal domain CQJ30_09350 PF00378 Enoyl-CoA hydratase/isomerase CQJ30_09355 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CQJ30_09355 PF02770 Acyl-CoA dehydrogenase, middle domain CQJ30_09355 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CQJ30_09360 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CQJ30_09360 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CQJ30_09360 PF02770 Acyl-CoA dehydrogenase, middle domain CQJ30_09375 PF00196 Bacterial regulatory proteins, luxR family CQJ30_09375 PF00072 Response regulator receiver domain CQJ30_09385 PF07690 Major Facilitator Superfamily CQJ30_09390 PF02679 (2R)-phospho-3-sulfolactate synthase (ComA) CQJ30_09400 PF01507 Phosphoadenosine phosphosulfate reductase family CQJ30_09405 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 CQJ30_09425 PF00884 Sulfatase CQJ30_09435 PF00583 Acetyltransferase (GNAT) family CQJ30_09440 PF13476 AAA domain CQJ30_09500 PF02796 Helix-turn-helix domain of resolvase CQJ30_09500 PF00665 Integrase core domain CQJ30_09505 PF01695 IstB-like ATP binding protein CQJ30_09520 PF13091 PLD-like domain CQJ30_09520 PF13396 Phospholipase_D-nuclease N-terminal CQJ30_09545 PF07875 Coat F domain CQJ30_09565 PF03862 SpoVAC/SpoVAEB sporulation membrane protein CQJ30_09570 PF07451 Stage V sporulation protein AD (SpoVAD) CQJ30_09575 PF03862 SpoVAC/SpoVAEB sporulation membrane protein CQJ30_09585 PF04239 Protein of unknown function (DUF421) CQJ30_09595 PF13396 Phospholipase_D-nuclease N-terminal CQJ30_09595 PF13091 PLD-like domain CQJ30_09605 PF13936 Helix-turn-helix domain CQJ30_09615 PF04239 Protein of unknown function (DUF421) CQJ30_09620 PF13700 Domain of unknown function (DUF4158) CQJ30_09620 PF01526 Tn3 transposase DDE domain CQJ30_09630 PF01520 N-acetylmuramoyl-L-alanine amidase CQJ30_09630 PF05036 Sporulation related domain CQJ30_09650 PF01588 Putative tRNA binding domain CQJ30_09660 PF04073 Aminoacyl-tRNA editing domain CQJ30_09665 PF00975 Thioesterase domain CQJ30_09670 PF07690 Major Facilitator Superfamily CQJ30_09675 PF10431 C-terminal, D2-small domain, of ClpB protein CQJ30_09675 PF02861 Clp amino terminal domain, pathogenicity island component CQJ30_09675 PF17871 AAA lid domain CQJ30_09675 PF07724 AAA domain (Cdc48 subfamily) CQJ30_09675 PF00004 ATPase family associated with various cellular activities (AAA) CQJ30_09680 PF03401 Tripartite tricarboxylate transporter family receptor CQJ30_09685 PF01970 Tripartite tricarboxylate transporter TctA family CQJ30_09705 PF01758 Sodium Bile acid symporter family CQJ30_09715 PF03323 Bacillus/Clostridium GerA spore germination protein CQJ30_09740 PF01925 Sulfite exporter TauE/SafE CQJ30_09745 PF16363 GDP-mannose 4,6 dehydratase CQJ30_09755 PF00534 Glycosyl transferases group 1 CQJ30_09765 PF00862 Sucrose synthase CQJ30_09765 PF00534 Glycosyl transferases group 1 CQJ30_09770 PF00535 Glycosyl transferase family 2 CQJ30_09775 PF00107 Zinc-binding dehydrogenase CQJ30_09775 PF08240 Alcohol dehydrogenase GroES-like domain CQJ30_09780 PF02126 Phosphotriesterase family CQJ30_09790 PF03006 Haemolysin-III related CQJ30_09795 PF00742 Homoserine dehydrogenase CQJ30_09795 PF03447 Homoserine dehydrogenase, NAD binding domain CQJ30_09800 PF01487 Type I 3-dehydroquinase CQJ30_09810 PF07690 Major Facilitator Superfamily CQJ30_09815 PF01526 Tn3 transposase DDE domain CQJ30_09815 PF13700 Domain of unknown function (DUF4158) CQJ30_09840 PF07731 Multicopper oxidase CQJ30_09840 PF07732 Multicopper oxidase CQJ30_09875 PF00672 HAMP domain CQJ30_09875 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CQJ30_09875 PF00512 His Kinase A (phospho-acceptor) domain CQJ30_09880 PF00486 Transcriptional regulatory protein, C terminal CQJ30_09880 PF00072 Response regulator receiver domain CQJ30_09890 PF02796 Helix-turn-helix domain of resolvase CQJ30_09890 PF00239 Resolvase, N terminal domain CQJ30_09900 PF01202 Shikimate kinase CQJ30_09905 PF08501 Shikimate dehydrogenase substrate binding domain CQJ30_09910 PF01817 Chorismate mutase type II CQJ30_09910 PF00800 Prephenate dehydratase CQJ30_09915 PF01264 Chorismate synthase CQJ30_09920 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) CQJ30_09925 PF01761 3-dehydroquinate synthase CQJ30_09940 PF08546 Ketopantoate reductase PanE/ApbA C terminal CQJ30_09940 PF02558 Ketopantoate reductase PanE/ApbA CQJ30_09945 PF00877 NlpC/P60 family CQJ30_09950 PF00696 Amino acid kinase family CQJ30_09950 PF13840 ACT domain CQJ30_09955 PF01925 Sulfite exporter TauE/SafE CQJ30_09960 PF00905 Penicillin binding protein transpeptidase domain CQJ30_09960 PF03717 Penicillin-binding Protein dimerisation domain CQJ30_09960 PF05223 NTF2-like N-terminal transpeptidase domain CQJ30_09980 PF10117 McrBC 5-methylcytosine restriction system component CQJ30_09985 PF07728 AAA domain (dynein-related subfamily) CQJ30_09985 PF12102 Domain of unknown function (DUF3578) CQJ30_10005 PF11867 Domain of unknown function (DUF3387) CQJ30_10005 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) CQJ30_10005 PF18766 SWI2/SNF2 ATPase CQJ30_10010 PF01420 Type I restriction modification DNA specificity domain CQJ30_10015 PF02384 N-6 DNA Methylase CQJ30_10030 PF00528 Binding-protein-dependent transport system inner membrane component CQJ30_10035 PF04069 Substrate binding domain of ABC-type glycine betaine transport system CQJ30_10040 PF00528 Binding-protein-dependent transport system inner membrane component CQJ30_10045 PF00005 ABC transporter CQJ30_10045 PF00571 CBS domain CQJ30_10055 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system CQJ30_10060 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin CQJ30_10065 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain CQJ30_10065 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain CQJ30_10070 PF00274 Fructose-bisphosphate aldolase class-I CQJ30_10075 PF00892 EamA-like transporter family CQJ30_10080 PF01966 HD domain CQJ30_10105 PF13421 SPFH domain-Band 7 family CQJ30_10110 PF04536 TPM domain CQJ30_10115 PF08271 TFIIB zinc-binding CQJ30_10120 PF04012 PspA/IM30 family CQJ30_10140 PF01965 DJ-1/PfpI family CQJ30_10175 PF00491 Arginase family CQJ30_10185 PF01276 Orn/Lys/Arg decarboxylase, major domain CQJ30_10185 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain CQJ30_10195 PF00132 Bacterial transferase hexapeptide (six repeats) CQJ30_10215 PF06508 Queuosine biosynthesis protein QueC CQJ30_10225 PF04055 Radical SAM superfamily CQJ30_10230 PF00005 ABC transporter CQJ30_10235 PF00528 Binding-protein-dependent transport system inner membrane component CQJ30_10240 PF01910 Thiamine-binding protein CQJ30_10245 PF09084 NMT1/THI5 like CQJ30_10265 PF09680 Family of unknown function CQJ30_10280 PF02645 Uncharacterised protein, DegV family COG1307 CQJ30_10285 PF03372 Endonuclease/Exonuclease/phosphatase family CQJ30_10290 PF01618 MotA/TolQ/ExbB proton channel family CQJ30_10295 PF13677 Membrane MotB of proton-channel complex MotA/MotB CQJ30_10295 PF00691 OmpA family CQJ30_10300 PF01693 Caulimovirus viroplasmin CQJ30_10315 PF01569 PAP2 superfamily CQJ30_10320 PF00005 ABC transporter CQJ30_10320 PF00664 ABC transporter transmembrane region CQJ30_10325 PF00664 ABC transporter transmembrane region CQJ30_10325 PF00005 ABC transporter CQJ30_10330 PF00107 Zinc-binding dehydrogenase CQJ30_10330 PF08240 Alcohol dehydrogenase GroES-like domain CQJ30_10335 PF01553 Acyltransferase CQJ30_10350 PF01053 Cys/Met metabolism PLP-dependent enzyme CQJ30_10355 PF01258 Prokaryotic dksA/traR C4-type zinc finger CQJ30_10360 PF00149 Calcineurin-like phosphoesterase CQJ30_10375 PF01625 Peptide methionine sulfoxide reductase CQJ30_10390 PF01053 Cys/Met metabolism PLP-dependent enzyme CQJ30_10395 PF00291 Pyridoxal-phosphate dependent enzyme CQJ30_10405 PF00291 Pyridoxal-phosphate dependent enzyme CQJ30_10410 PF02664 S-Ribosylhomocysteinase (LuxS) CQJ30_10415 PF08241 Methyltransferase domain CQJ30_10425 PF01741 Large-conductance mechanosensitive channel, MscL CQJ30_10435 PF06925 Monogalactosyldiacylglycerol (MGDG) synthase CQJ30_10450 PF13217 Protein of unknown function (DUF4025) CQJ30_10455 PF02632 BioY family CQJ30_10460 PF02537 CrcB-like protein, Camphor Resistance (CrcB) CQJ30_10465 PF02537 CrcB-like protein, Camphor Resistance (CrcB) CQJ30_10470 PF01256 Carbohydrate kinase CQJ30_10480 PF01883 Iron-sulfur cluster assembly protein CQJ30_10485 PF07690 Major Facilitator Superfamily CQJ30_10500 PF01810 LysE type translocator CQJ30_10505 PF00324 Amino acid permease CQJ30_10515 PF00313 'Cold-shock' DNA-binding domain CQJ30_10520 PF00313 'Cold-shock' DNA-binding domain CQJ30_10525 PF00080 Copper/zinc superoxide dismutase (SODC) CQJ30_10530 PF02735 Ku70/Ku80 beta-barrel domain CQJ30_10535 PF01068 ATP dependent DNA ligase domain CQJ30_10540 PF01678 Diaminopimelate epimerase CQJ30_10545 PF00578 AhpC/TSA family CQJ30_10570 PF01471 Putative peptidoglycan binding domain CQJ30_10570 PF03572 Peptidase family S41 CQJ30_10570 PF17820 PDZ domain CQJ30_10575 PF02557 D-alanyl-D-alanine carboxypeptidase CQJ30_10580 PF01048 Phosphorylase superfamily CQJ30_10590 PF07070 SpoOM protein CQJ30_10600 PF06855 YozE SAM-like fold CQJ30_10605 PF01641 SelR domain CQJ30_10610 PF01625 Peptide methionine sulfoxide reductase CQJ30_10615 PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF CQJ30_10615 PF17126 RsmF rRNA methyltransferase first C-terminal domain CQJ30_10615 PF01189 16S rRNA methyltransferase RsmB/F CQJ30_10625 PF13472 GDSL-like Lipase/Acylhydrolase family CQJ30_10630 PF02630 SCO1/SenC CQJ30_10635 PF02645 Uncharacterised protein, DegV family COG1307 CQJ30_10640 PF02586 SOS response associated peptidase (SRAP) CQJ30_10645 PF00186 Dihydrofolate reductase CQJ30_10650 PF00303 Thymidylate synthase CQJ30_10660 PF06491 Disulphide isomerase CQJ30_10665 PF08712 Scaffold protein Nfu/NifU N terminal CQJ30_10665 PF13769 Virulence factor CQJ30_10670 PF16326 ABC transporter C-terminal domain CQJ30_10670 PF00005 ABC transporter CQJ30_10670 PF12848 ABC transporter CQJ30_10680 PF01268 Formate--tetrahydrofolate ligase CQJ30_10690 PF01325 Iron dependent repressor, N-terminal DNA binding domain CQJ30_10690 PF02742 Iron dependent repressor, metal binding and dimerisation domain CQJ30_10695 PF00313 'Cold-shock' DNA-binding domain CQJ30_10700 PF10782 Zinc-finger CQJ30_10705 PF13456 Reverse transcriptase-like CQJ30_10735 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain CQJ30_10735 PF01367 5'-3' exonuclease, C-terminal SAM fold CQJ30_10740 PF00512 His Kinase A (phospho-acceptor) domain CQJ30_10740 PF18698 Histidine kinase sensor domain CQJ30_10740 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CQJ30_10740 PF00672 HAMP domain CQJ30_10740 PF00989 PAS fold CQJ30_10745 PF00072 Response regulator receiver domain CQJ30_10745 PF00486 Transcriptional regulatory protein, C terminal CQJ30_10750 PF07563 Protein of unknown function (DUF1541) CQJ30_10755 PF02535 ZIP Zinc transporter CQJ30_10775 PF00403 Heavy-metal-associated domain CQJ30_10780 PF00403 Heavy-metal-associated domain CQJ30_10785 PF03965 Penicillinase repressor CQJ30_10790 PF02583 Metal-sensitive transcriptional repressor CQJ30_10815 PF01209 ubiE/COQ5 methyltransferase family CQJ30_10820 PF07731 Multicopper oxidase CQJ30_10820 PF07732 Multicopper oxidase CQJ30_10820 PF00394 Multicopper oxidase CQJ30_10860 PF04225 Opacity-associated protein A LysM-like domain CQJ30_10860 PF01551 Peptidase family M23 CQJ30_10870 PF05598 Transposase domain (DUF772) CQJ30_10885 PF01381 Helix-turn-helix CQJ30_10900 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CQJ30_10900 PF07992 Pyridine nucleotide-disulphide oxidoreductase CQJ30_10910 PF02040 Arsenical pump membrane protein CQJ30_10915 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CQJ30_10920 PF01022 Bacterial regulatory protein, arsR family CQJ30_10945 PF01022 Bacterial regulatory protein, arsR family CQJ30_10955 PF07731 Multicopper oxidase CQJ30_10955 PF00394 Multicopper oxidase CQJ30_10955 PF07732 Multicopper oxidase CQJ30_10960 PF01790 Prolipoprotein diacylglyceryl transferase CQJ30_10990 PF13005 zinc-finger binding domain of transposase IS66 CQJ30_10990 PF13817 IS66 C-terminal element CQJ30_10990 PF13007 Transposase C of IS166 homeodomain CQJ30_10990 PF03050 Transposase IS66 family CQJ30_11005 PF07669 Eco57I restriction-modification methylase CQJ30_11030 PF00589 Phage integrase family CQJ30_11075 PF13614 AAA domain CQJ30_11090 PF05598 Transposase domain (DUF772) CQJ30_11095 PF01367 5'-3' exonuclease, C-terminal SAM fold CQJ30_11095 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain CQJ30_11100 PF00350 Dynamin family CQJ30_11105 PF00860 Permease family CQJ30_11110 PF00156 Phosphoribosyl transferase domain CQJ30_11115 PF08668 HDOD domain CQJ30_11115 PF00563 EAL domain CQJ30_11120 PF02074 Carboxypeptidase Taq (M32) metallopeptidase CQJ30_11130 PF01170 Putative RNA methylase family UPF0020 CQJ30_11130 PF02926 THUMP domain CQJ30_11140 PF05103 DivIVA protein CQJ30_11155 PF13482 RNase_H superfamily CQJ30_11160 PF00271 Helicase conserved C-terminal domain CQJ30_11160 PF09369 Domain of unknown function (DUF1998) CQJ30_11160 PF00270 DEAD/DEAH box helicase CQJ30_11165 PF00011 Hsp20/alpha crystallin family CQJ30_11170 PF14179 YppG-like protein CQJ30_11190 PF03838 Recombination protein U CQJ30_11195 PF00912 Transglycosylase CQJ30_11195 PF00905 Penicillin binding protein transpeptidase domain CQJ30_11205 PF00730 HhH-GPD superfamily base excision DNA repair protein CQJ30_11205 PF00633 Helix-hairpin-helix motif CQJ30_11205 PF10576 Iron-sulfur binding domain of endonuclease III CQJ30_11210 PF07261 Replication initiation and membrane attachment CQJ30_11215 PF00152 tRNA synthetases class II (D, K and N) CQJ30_11215 PF01336 OB-fold nucleic acid binding domain CQJ30_11220 PF00155 Aminotransferase class I and II CQJ30_11230 PF14084 Protein of unknown function (DUF4264) CQJ30_11235 PF00929 Exonuclease CQJ30_11235 PF13307 Helicase C-terminal domain CQJ30_11235 PF04851 Type III restriction enzyme, res subunit CQJ30_11240 PF02261 Aspartate decarboxylase CQJ30_11245 PF02569 Pantoate-beta-alanine ligase CQJ30_11250 PF02548 Ketopantoate hydroxymethyltransferase CQJ30_11255 PF02237 Biotin protein ligase C terminal domain CQJ30_11255 PF03099 Biotin/lipoate A/B protein ligase family CQJ30_11255 PF08279 HTH domain CQJ30_11260 PF01743 Poly A polymerase head domain CQJ30_11260 PF12627 Probable RNA and SrmB- binding site of polymerase A CQJ30_11260 PF13735 tRNA nucleotidyltransferase domain 2 putative CQJ30_11265 PF00534 Glycosyl transferases group 1 CQJ30_11265 PF13439 Glycosyltransferase Family 4 CQJ30_11270 PF02142 MGS-like domain CQJ30_11275 PF01113 Dihydrodipicolinate reductase, N-terminus CQJ30_11275 PF05173 Dihydrodipicolinate reductase, C-terminus CQJ30_11280 PF03819 MazG nucleotide pyrophosphohydrolase domain CQJ30_11285 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 CQJ30_11285 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) CQJ30_11290 PF04298 Putative neutral zinc metallopeptidase CQJ30_11295 PF09577 Sporulation protein YpjB (SpoYpjB) CQJ30_11300 PF07187 Protein of unknown function (DUF1405) CQJ30_11305 PF00032 Cytochrome b(C-terminal)/b6/petD CQJ30_11305 PF13442 Cytochrome C oxidase, cbb3-type, subunit III CQJ30_11310 PF00033 Cytochrome b/b6/petB CQJ30_11315 PF00355 Rieske [2Fe-2S] domain CQJ30_11325 PF08858 IDEAL domain CQJ30_11325 PF08864 UPF0302 domain CQJ30_11340 PF01739 CheR methyltransferase, SAM binding domain CQJ30_11340 PF03705 CheR methyltransferase, all-alpha domain CQJ30_11345 PF00334 Nucleoside diphosphate kinase CQJ30_11350 PF00348 Polyprenyl synthetase CQJ30_11355 PF01209 ubiE/COQ5 methyltransferase family CQJ30_11360 PF07307 Heptaprenyl diphosphate synthase (HEPPP synthase) subunit 1 CQJ30_11365 PF02081 Tryptophan RNA-binding attenuator protein CQJ30_11370 PF01227 GTP cyclohydrolase I CQJ30_11375 PF00216 Bacterial DNA-binding protein CQJ30_11380 PF09547 Stage IV sporulation protein A (spore_IV_A) CQJ30_11390 PF10966 Protein of unknown function (DUF2768) CQJ30_11395 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus CQJ30_11395 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus CQJ30_11400 PF01926 50S ribosome-binding GTPase CQJ30_11400 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal CQJ30_11410 PF14045 YIEGIA protein CQJ30_11420 PF00575 S1 RNA binding domain CQJ30_11425 PF01553 Acyltransferase CQJ30_11430 PF02224 Cytidylate kinase CQJ30_11445 PF03413 Peptidase propeptide and YPEB domain CQJ30_11445 PF14620 YpeB sporulation CQJ30_11450 PF07486 Cell Wall Hydrolase CQJ30_11450 PF01471 Putative peptidoglycan binding domain CQJ30_11460 PF13367 PrsW family intramembrane metalloprotease CQJ30_11465 PF00710 Asparaginase, N-terminal CQJ30_11465 PF17763 Glutaminase/Asparaginase C-terminal domain CQJ30_11485 PF07731 Multicopper oxidase CQJ30_11485 PF07732 Multicopper oxidase CQJ30_11495 PF05598 Transposase domain (DUF772) CQJ30_11525 PF00672 HAMP domain CQJ30_11525 PF00512 His Kinase A (phospho-acceptor) domain CQJ30_11525 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CQJ30_11530 PF00072 Response regulator receiver domain CQJ30_11530 PF00486 Transcriptional regulatory protein, C terminal CQJ30_11545 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase CQJ30_11545 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain CQJ30_11550 PF05389 Negative regulator of genetic competence (MecA) CQJ30_11555 PF10864 Protein of unknown function (DUF2663) CQJ30_11565 PF02517 CPBP intramembrane metalloprotease CQJ30_11570 PF00271 Helicase conserved C-terminal domain CQJ30_11570 PF00270 DEAD/DEAH box helicase CQJ30_11585 PF12822 ECF transporter, substrate-specific component CQJ30_11590 PF10145 Phage-related minor tail protein CQJ30_11590 PF01464 Transglycosylase SLT domain CQJ30_11590 PF01551 Peptidase family M23 CQJ30_11595 PF00672 HAMP domain CQJ30_11595 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CQJ30_11595 PF00989 PAS fold CQJ30_11595 PF00512 His Kinase A (phospho-acceptor) domain CQJ30_11595 PF18698 Histidine kinase sensor domain CQJ30_11600 PF00072 Response regulator receiver domain CQJ30_11600 PF00486 Transcriptional regulatory protein, C terminal CQJ30_11605 PF01578 Cytochrome C assembly protein CQJ30_11610 PF05140 ResB-like family CQJ30_11615 PF00578 AhpC/TSA family CQJ30_11620 PF00849 RNA pseudouridylate synthase CQJ30_11620 PF01479 S4 domain CQJ30_11625 PF07670 Nucleoside recognition CQJ30_11630 PF07670 Nucleoside recognition CQJ30_11635 PF07943 Penicillin-binding protein 5, C-terminal domain CQJ30_11635 PF00768 D-alanyl-D-alanine carboxypeptidase CQJ30_11640 PF04079 Segregation and condensation complex subunit ScpB CQJ30_11645 PF02616 Segregation and condensation protein ScpA CQJ30_11650 PF00583 Acetyltransferase (GNAT) family CQJ30_11655 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain CQJ30_11655 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain CQJ30_11660 PF03323 Bacillus/Clostridium GerA spore germination protein CQJ30_11665 PF13782 Stage V sporulation protein AB CQJ30_11670 PF12164 Stage V sporulation protein AA CQJ30_11675 PF04545 Sigma-70, region 4 CQJ30_11675 PF04539 Sigma-70 region 3 CQJ30_11675 PF04542 Sigma-70 region 2 CQJ30_11680 PF13581 Histidine kinase-like ATPase domain CQJ30_11685 PF01740 STAS domain CQJ30_11690 PF00768 D-alanyl-D-alanine carboxypeptidase CQJ30_11690 PF07943 Penicillin-binding protein 5, C-terminal domain CQJ30_11695 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain CQJ30_11695 PF00591 Glycosyl transferase family, a/b domain CQJ30_11695 PF02885 Glycosyl transferase family, helical bundle domain CQJ30_11700 PF01676 Metalloenzyme superfamily CQJ30_11705 PF02899 Phage integrase, N-terminal SAM-like domain CQJ30_11705 PF00589 Phage integrase family CQJ30_11710 PF14004 Protein of unknown function (DUF4227) CQJ30_11715 PF01475 Ferric uptake regulator family CQJ30_11720 PF01944 Stage II sporulation protein M CQJ30_11730 PF00293 NUDIX domain CQJ30_11740 PF00248 Aldo/keto reductase family CQJ30_11750 PF12146 Serine aminopeptidase, S33 CQJ30_11765 PF08863 YolD-like protein CQJ30_11770 PF11799 impB/mucB/samB family C-terminal domain CQJ30_11770 PF00817 impB/mucB/samB family CQJ30_11770 PF11798 IMS family HHH motif CQJ30_11775 PF01207 Dihydrouridine synthase (Dus) CQJ30_11780 PF00155 Aminotransferase class I and II CQJ30_11785 PF01502 Phosphoribosyl-AMP cyclohydrolase CQJ30_11785 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase CQJ30_11795 PF00977 Histidine biosynthesis protein CQJ30_11800 PF00117 Glutamine amidotransferase class-I CQJ30_11810 PF00815 Histidinol dehydrogenase CQJ30_11815 PF01634 ATP phosphoribosyltransferase CQJ30_11820 PF13393 Histidyl-tRNA synthetase CQJ30_11825 PF02811 PHP domain CQJ30_11830 PF00106 short chain dehydrogenase CQJ30_11835 PF00753 Metallo-beta-lactamase superfamily CQJ30_11835 PF12706 Beta-lactamase superfamily domain CQJ30_11840 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain CQJ30_11840 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain CQJ30_11845 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase CQJ30_11845 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain CQJ30_11850 PF11798 IMS family HHH motif CQJ30_11850 PF11799 impB/mucB/samB family C-terminal domain CQJ30_11850 PF00817 impB/mucB/samB family CQJ30_11855 PF01584 CheW-like domain CQJ30_11860 PF01546 Peptidase family M20/M25/M40 CQJ30_11860 PF07687 Peptidase dimerisation domain CQJ30_11865 PF01039 Carboxyl transferase domain CQJ30_11875 PF03734 L,D-transpeptidase catalytic domain CQJ30_11880 PF06491 Disulphide isomerase CQJ30_11890 PF02310 B12 binding domain CQJ30_11890 PF01642 Methylmalonyl-CoA mutase CQJ30_11895 PF02310 B12 binding domain CQJ30_11895 PF01642 Methylmalonyl-CoA mutase CQJ30_11900 PF00364 Biotin-requiring enzyme CQJ30_11900 PF02817 e3 binding domain CQJ30_11900 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) CQJ30_11905 PF02779 Transketolase, pyrimidine binding domain CQJ30_11905 PF02780 Transketolase, C-terminal domain CQJ30_11910 PF00676 Dehydrogenase E1 component CQJ30_11915 PF07992 Pyridine nucleotide-disulphide oxidoreductase CQJ30_11915 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CQJ30_11920 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase CQJ30_11920 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain CQJ30_11930 PF02954 Bacterial regulatory protein, Fis family CQJ30_11930 PF00158 Sigma-54 interaction domain CQJ30_11930 PF00989 PAS fold CQJ30_11940 PF03009 Glycerophosphoryl diester phosphodiesterase family CQJ30_11945 PF00072 Response regulator receiver domain CQJ30_11945 PF08769 Sporulation initiation factor Spo0A C terminal CQJ30_11950 PF05580 SpoIVB peptidase S55 CQJ30_11950 PF17820 PDZ domain CQJ30_11955 PF13476 AAA domain CQJ30_11960 PF02863 Arginine repressor, C-terminal domain CQJ30_11960 PF01316 Arginine repressor, DNA binding domain CQJ30_11965 PF00672 HAMP domain CQJ30_11965 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CQJ30_11965 PF02743 Cache domain CQJ30_11970 PF00696 Amino acid kinase family CQJ30_11975 PF13520 Amino acid permease CQJ30_11980 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain CQJ30_11980 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain CQJ30_11990 PF00027 Cyclic nucleotide-binding domain CQJ30_11990 PF13545 Crp-like helix-turn-helix domain CQJ30_11995 PF01479 S4 domain CQJ30_11995 PF01728 FtsJ-like methyltransferase CQJ30_12000 PF13292 1-deoxy-D-xylulose-5-phosphate synthase CQJ30_12000 PF02780 Transketolase, C-terminal domain CQJ30_12000 PF02779 Transketolase, pyrimidine binding domain CQJ30_12005 PF00348 Polyprenyl synthetase CQJ30_12010 PF02609 Exonuclease VII small subunit CQJ30_12015 PF13742 OB-fold nucleic acid binding domain CQJ30_12015 PF02601 Exonuclease VII, large subunit CQJ30_12020 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain CQJ30_12020 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain CQJ30_12025 PF01029 NusB family CQJ30_12030 PF03780 Asp23 family, cell envelope-related function CQJ30_12035 PF02785 Biotin carboxylase C-terminal domain CQJ30_12035 PF00289 Biotin carboxylase, N-terminal domain CQJ30_12035 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain CQJ30_12040 PF00364 Biotin-requiring enzyme CQJ30_12045 PF12685 SpoIIIAH-like protein CQJ30_12055 PF09581 Stage III sporulation protein AF (Spore_III_AF) CQJ30_12060 PF09546 Stage III sporulation protein AE (spore_III_AE) CQJ30_12065 PF06686 Stage III sporulation protein AC/AD protein family CQJ30_12070 PF06686 Stage III sporulation protein AC/AD protein family CQJ30_12075 PF09548 Stage III sporulation protein AB (spore_III_AB) CQJ30_12085 PF09285 Elongation factor P, C-terminal CQJ30_12085 PF08207 Elongation factor P (EF-P) KOW-like domain CQJ30_12085 PF01132 Elongation factor P (EF-P) OB domain CQJ30_12090 PF01321 Creatinase/Prolidase N-terminal domain CQJ30_12090 PF00557 Metallopeptidase family M24 CQJ30_12095 PF11085 Conserved membrane protein YqhR CQJ30_12105 PF01734 Patatin-like phospholipase CQJ30_12110 PF03477 ATP cone domain CQJ30_12110 PF02867 Ribonucleotide reductase, barrel domain CQJ30_12110 PF00317 Ribonucleotide reductase, all-alpha domain CQJ30_12115 PF00581 Rhodanese-like domain CQJ30_12120 PF02347 Glycine cleavage system P-protein CQJ30_12125 PF02347 Glycine cleavage system P-protein CQJ30_12130 PF01571 Aminomethyltransferase folate-binding domain CQJ30_12130 PF08669 Glycine cleavage T-protein C-terminal barrel domain CQJ30_12135 PF00271 Helicase conserved C-terminal domain CQJ30_12135 PF00176 SNF2 family N-terminal domain CQJ30_12140 PF11079 Bacterial protein YqhG of unknown function CQJ30_12145 PF10958 Protein of unknown function (DUF2759) CQJ30_12150 PF11117 Protein of unknown function (DUF2626) CQJ30_12160 PF00437 Type II/IV secretion system protein CQJ30_12165 PF00482 Type II secretion system (T2SS), protein F CQJ30_12170 PF07963 Prokaryotic N-terminal methylation motif CQJ30_12205 PF01476 LysM domain CQJ30_12205 PF00246 Zinc carboxypeptidase CQJ30_12210 PF00480 ROK family CQJ30_12215 PF06014 Bacterial protein of unknown function (DUF910) CQJ30_12220 PF03323 Bacillus/Clostridium GerA spore germination protein CQJ30_12230 PF01694 Rhomboid family CQJ30_12240 PF01812 5-formyltetrahydrofolate cyclo-ligase family CQJ30_12245 PF00471 Ribosomal protein L33 CQJ30_12270 PF07690 Major Facilitator Superfamily CQJ30_12275 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain CQJ30_12275 PF02777 Iron/manganese superoxide dismutases, C-terminal domain CQJ30_12280 PF04306 Protein of unknown function (DUF456) CQJ30_12300 PF04551 GcpE protein CQJ30_12310 PF01425 Amidase CQJ30_12315 PF01475 Ferric uptake regulator family CQJ30_12320 PF00950 ABC 3 transport family CQJ30_12325 PF00005 ABC transporter CQJ30_12330 PF11116 Protein of unknown function (DUF2624) CQJ30_12335 PF01261 Xylose isomerase-like TIM barrel CQJ30_12340 PF00270 DEAD/DEAH box helicase CQJ30_12340 PF00271 Helicase conserved C-terminal domain CQJ30_12350 PF02401 LytB protein CQJ30_12355 PF01784 NIF3 (NGG1p interacting factor 3) CQJ30_12360 PF04816 tRNA (adenine(22)-N(1))-methyltransferase CQJ30_12365 PF13442 Cytochrome C oxidase, cbb3-type, subunit III CQJ30_12370 PF04545 Sigma-70, region 4 CQJ30_12370 PF04539 Sigma-70 region 3 CQJ30_12370 PF03979 Sigma-70 factor, region 1.1 CQJ30_12370 PF00140 Sigma-70 factor, region 1.2 CQJ30_12370 PF04542 Sigma-70 region 2 CQJ30_12375 PF01807 CHC2 zinc finger CQJ30_12375 PF08275 DNA primase catalytic core, N-terminal domain CQJ30_12375 PF10410 DnaB-helicase binding domain of primase CQJ30_12380 PF03618 Kinase/pyrophosphorylase CQJ30_12385 PF08279 HTH domain CQJ30_12385 PF00571 CBS domain CQJ30_12390 PF05746 DALR anticodon binding domain CQJ30_12390 PF02092 Glycyl-tRNA synthetase beta subunit CQJ30_12395 PF02091 Glycyl-tRNA synthetase alpha subunit CQJ30_12405 PF14006 YqzL-like protein CQJ30_12410 PF07650 KH domain CQJ30_12410 PF01926 50S ribosome-binding GTPase CQJ30_12415 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region CQJ30_12420 PF01219 Prokaryotic diacylglycerol kinase CQJ30_12425 PF02130 Uncharacterized protein family UPF0054 CQJ30_12430 PF07698 7TM receptor with intracellular HD hydrolase CQJ30_12430 PF07697 7TM-HD extracellular CQJ30_12430 PF01966 HD domain CQJ30_12435 PF02562 PhoH-like protein CQJ30_12440 PF06898 Putative stage IV sporulation protein YqfD CQJ30_12445 PF07873 YabP family CQJ30_12455 PF12127 SigmaW regulon antibacterial CQJ30_12460 PF01972 Serine dehydrogenase proteinase CQJ30_12460 PF01957 NfeD-like C-terminal, partner-binding CQJ30_12465 PF09424 Yqey-like protein CQJ30_12470 PF01165 Ribosomal protein S21 CQJ30_12475 PF02690 Na+/Pi-cotransporter CQJ30_12480 PF01791 DeoC/LacD family aldolase CQJ30_12485 PF01938 TRAM domain CQJ30_12485 PF04055 Radical SAM superfamily CQJ30_12485 PF00919 Uncharacterized protein family UPF0004 CQJ30_12490 PF04452 RNA methyltransferase CQJ30_12500 PF00684 DnaJ central domain CQJ30_12500 PF01556 DnaJ C terminal domain CQJ30_12500 PF00226 DnaJ domain CQJ30_12505 PF00012 Hsp70 protein CQJ30_12510 PF01025 GrpE CQJ30_12515 PF01628 HrcA protein C terminal domain CQJ30_12520 PF06969 HemN C-terminal domain CQJ30_12520 PF04055 Radical SAM superfamily CQJ30_12525 PF03144 Elongation factor Tu domain 2 CQJ30_12525 PF00679 Elongation factor G C-terminus CQJ30_12525 PF00009 Elongation factor Tu GTP binding domain CQJ30_12525 PF06421 GTP-binding protein LepA C-terminus CQJ30_12530 PF12438 Protein of unknown function (DUF3679) CQJ30_12540 PF01649 Ribosomal protein S20 CQJ30_12545 PF06144 DNA polymerase III, delta subunit CQJ30_12550 PF14141 YqzM-like protein CQJ30_12555 PF00753 Metallo-beta-lactamase superfamily CQJ30_12555 PF13567 Domain of unknown function (DUF4131) CQJ30_12555 PF03772 Competence protein CQJ30_12560 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region CQJ30_12565 PF12323 Helix-turn-helix domain CQJ30_12565 PF07282 Putative transposase DNA-binding domain CQJ30_12565 PF01385 Probable transposase CQJ30_12570 PF10531 SLBB domain CQJ30_12575 PF14748 Pyrroline-5-carboxylate reductase dimerisation CQJ30_12575 PF03807 NADP oxidoreductase coenzyme F420-dependent CQJ30_12580 PF13649 Methyltransferase domain CQJ30_12590 PF01966 HD domain CQJ30_12595 PF01467 Cytidylyltransferase-like CQJ30_12600 PF01985 CRS1 / YhbY (CRM) domain CQJ30_12605 PF01926 50S ribosome-binding GTPase CQJ30_12620 PF08970 Sporulation inhibitor A CQJ30_12625 PF02666 Phosphatidylserine decarboxylase CQJ30_12630 PF01066 CDP-alcohol phosphatidyltransferase CQJ30_12635 PF04545 Sigma-70, region 4 CQJ30_12635 PF04542 Sigma-70 region 2 CQJ30_12645 PF02687 FtsX-like permease family CQJ30_12650 PF00486 Transcriptional regulatory protein, C terminal CQJ30_12650 PF00072 Response regulator receiver domain CQJ30_12655 PF01048 Phosphorylase superfamily CQJ30_12660 PF07423 Domain of unknown function (DUF1510) CQJ30_12665 PF00905 Penicillin binding protein transpeptidase domain CQJ30_12665 PF03717 Penicillin-binding Protein dimerisation domain CQJ30_12670 PF01272 Transcription elongation factor, GreA/GreB, C-term CQJ30_12670 PF03449 Transcription elongation factor, N-terminal CQJ30_12675 PF00485 Phosphoribulokinase / Uridine kinase family CQJ30_12695 PF02618 YceG-like family CQJ30_12705 PF06949 Protein of unknown function (DUF1292) CQJ30_12710 PF03652 Holliday junction resolvase CQJ30_12715 PF06135 IreB regulatory phosphoprotein CQJ30_12720 PF02272 DHHA1 domain CQJ30_12720 PF01411 tRNA synthetases class II (A) CQJ30_12720 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain CQJ30_12725 PF01594 AI-2E family transporter CQJ30_12735 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain CQJ30_12735 PF13538 UvrD-like helicase C-terminal domain CQJ30_12735 PF14490 Helix-hairpin-helix containing domain CQJ30_12745 PF00266 Aminotransferase class-V CQJ30_12750 PF02082 Transcriptional regulator CQJ30_12760 PF05496 Holliday junction DNA helicase RuvB P-loop domain CQJ30_12760 PF12002 MgsA AAA+ ATPase C terminal CQJ30_12760 PF16193 AAA C-terminal domain CQJ30_12770 PF00899 ThiF family CQJ30_12780 PF02938 GAD domain CQJ30_12780 PF01336 OB-fold nucleic acid binding domain CQJ30_12780 PF00152 tRNA synthetases class II (D, K and N) CQJ30_12785 PF03129 Anticodon binding domain CQJ30_12785 PF13393 Histidyl-tRNA synthetase CQJ30_12790 PF02580 D-Tyr-tRNA(Tyr) deacylase CQJ30_12795 PF13291 ACT domain CQJ30_12795 PF04607 Region found in RelA / SpoT proteins CQJ30_12795 PF02824 TGS domain CQJ30_12800 PF00156 Phosphoribosyl transferase domain CQJ30_12805 PF01368 DHH family CQJ30_12805 PF02272 DHHA1 domain CQJ30_12805 PF17768 RecJ OB domain CQJ30_12805 PF10141 Single-strand DNA-specific exonuclease, C terminal domain CQJ30_12810 PF02355 Protein export membrane protein CQJ30_12810 PF07549 SecD/SecF GG Motif CQJ30_12820 PF14667 Polysaccharide biosynthesis C-terminal domain CQJ30_12820 PF01943 Polysaccharide biosynthesis protein CQJ30_12825 PF04239 Protein of unknown function (DUF421) CQJ30_12830 PF12670 Protein of unknown function (DUF3792) CQJ30_12835 PF02699 Preprotein translocase subunit CQJ30_12840 PF01702 Queuine tRNA-ribosyltransferase CQJ30_12845 PF02547 Queuosine biosynthesis protein CQJ30_12850 PF11146 Protein of unknown function (DUF2905) CQJ30_12855 PF05496 Holliday junction DNA helicase RuvB P-loop domain CQJ30_12855 PF05491 RuvB C-terminal winged helix domain CQJ30_12855 PF17864 RuvB AAA lid domain CQJ30_12860 PF07499 RuvA, C-terminal domain CQJ30_12860 PF01330 RuvA N terminal domain CQJ30_12865 PF00465 Iron-containing alcohol dehydrogenase CQJ30_12865 PF00171 Aldehyde dehydrogenase family CQJ30_12875 PF02603 HPr Serine kinase N terminus CQJ30_12875 PF07475 HPr Serine kinase C-terminal domain CQJ30_12885 PF07475 HPr Serine kinase C-terminal domain CQJ30_12885 PF02603 HPr Serine kinase N terminus CQJ30_12890 PF00107 Zinc-binding dehydrogenase CQJ30_12890 PF08240 Alcohol dehydrogenase GroES-like domain CQJ30_12890 PF13823 Alcohol dehydrogenase GroES-associated CQJ30_12900 PF00465 Iron-containing alcohol dehydrogenase CQJ30_12905 PF08955 BofC C-terminal domain CQJ30_12905 PF08977 Bypass of Forespore C, N terminal CQJ30_12910 PF02540 NAD synthase CQJ30_12920 PF00326 Prolyl oligopeptidase family CQJ30_12925 PF00872 Transposase, Mutator family CQJ30_12930 PF01476 LysM domain CQJ30_12940 PF01926 50S ribosome-binding GTPase CQJ30_12940 PF01018 GTP1/OBG CQJ30_12940 PF09269 Domain of unknown function (DUF1967) CQJ30_12945 PF14682 Sporulation initiation phospho-transferase B, C-terminal CQJ30_12945 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain CQJ30_12950 PF01016 Ribosomal L27 protein CQJ30_12955 PF04327 Cysteine protease Prp CQJ30_12960 PF00829 Ribosomal prokaryotic L21 protein CQJ30_12965 PF00575 S1 RNA binding domain CQJ30_12965 PF10150 Ribonuclease E/G family CQJ30_12970 PF02163 Peptidase family M50 CQJ30_12975 PF01551 Peptidase family M23 CQJ30_12985 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain CQJ30_12990 PF03775 Septum formation inhibitor MinC, C-terminal domain CQJ30_12995 PF04093 rod shape-determining protein MreD CQJ30_13000 PF04085 rod shape-determining protein MreC CQJ30_13010 PF04002 RadC-like JAB domain CQJ30_13015 PF02545 Maf-like protein CQJ30_13025 PF00005 ABC transporter CQJ30_13030 PF00528 Binding-protein-dependent transport system inner membrane component CQJ30_13035 PF01478 Type IV leader peptidase family CQJ30_13035 PF06750 Bacterial Peptidase A24 N-terminal domain CQJ30_13055 PF07963 Prokaryotic N-terminal methylation motif CQJ30_13055 PF00114 Pilin (bacterial filament) CQJ30_13060 PF00482 Type II secretion system (T2SS), protein F CQJ30_13065 PF00437 Type II/IV secretion system protein CQJ30_13070 PF00437 Type II/IV secretion system protein CQJ30_13070 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain CQJ30_13120 PF00990 Diguanylate cyclase, GGDEF domain CQJ30_13120 PF07694 5TMR of 5TMR-LYT CQJ30_13125 PF02875 Mur ligase family, glutamate ligase domain CQJ30_13125 PF08245 Mur ligase middle domain CQJ30_13140 PF10458 Valyl tRNA synthetase tRNA binding arm CQJ30_13140 PF00133 tRNA synthetases class I (I, L, M and V) CQJ30_13140 PF08264 Anticodon-binding domain of tRNA CQJ30_13155 PF08447 PAS fold CQJ30_13155 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CQJ30_13155 PF13426 PAS domain CQJ30_13160 PF14824 Sirohaem biosynthesis protein central CQJ30_13170 PF01476 LysM domain CQJ30_13175 PF00202 Aminotransferase class-III CQJ30_13180 PF00490 Delta-aminolevulinic acid dehydratase CQJ30_13190 PF03900 Porphobilinogen deaminase, C-terminal domain CQJ30_13190 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain CQJ30_13195 PF01578 Cytochrome C assembly protein CQJ30_13200 PF01488 Shikimate / quinate 5-dehydrogenase CQJ30_13200 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain CQJ30_13200 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain CQJ30_13210 PF01926 50S ribosome-binding GTPase CQJ30_13215 PF05362 Lon protease (S16) C-terminal proteolytic domain CQJ30_13215 PF00004 ATPase family associated with various cellular activities (AAA) CQJ30_13215 PF02190 ATP-dependent protease La (LON) substrate-binding domain CQJ30_13220 PF05362 Lon protease (S16) C-terminal proteolytic domain CQJ30_13220 PF00004 ATPase family associated with various cellular activities (AAA) CQJ30_13225 PF06689 ClpX C4-type zinc finger CQJ30_13225 PF10431 C-terminal, D2-small domain, of ClpB protein CQJ30_13225 PF07724 AAA domain (Cdc48 subfamily) CQJ30_13230 PF05698 Bacterial trigger factor protein (TF) C-terminus CQJ30_13230 PF05697 Bacterial trigger factor protein (TF) CQJ30_13230 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase CQJ30_13255 PF01725 Ham1 family CQJ30_13260 PF10646 Sporulation and spore germination CQJ30_13265 PF01177 Asp/Glu/Hydantoin racemase CQJ30_13270 PF01047 MarR family CQJ30_13280 PF00196 Bacterial regulatory proteins, luxR family CQJ30_13285 PF03061 Thioesterase superfamily CQJ30_13290 PF13085 2Fe-2S iron-sulfur cluster binding domain CQJ30_13290 PF13183 4Fe-4S dicluster domain CQJ30_13295 PF02910 Fumarate reductase flavoprotein C-term CQJ30_13295 PF00890 FAD binding domain CQJ30_13300 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit CQJ30_13305 PF10702 Protein of unknown function (DUF2507) CQJ30_13310 PF02151 UvrB/uvrC motif CQJ30_13310 PF08459 UvrC Helix-hairpin-helix N-terminal CQJ30_13310 PF01541 GIY-YIG catalytic domain CQJ30_13315 PF00085 Thioredoxin CQJ30_13320 PF01012 Electron transfer flavoprotein domain CQJ30_13320 PF00766 Electron transfer flavoprotein FAD-binding domain CQJ30_13325 PF01012 Electron transfer flavoprotein domain CQJ30_13330 PF00378 Enoyl-CoA hydratase/isomerase CQJ30_13335 PF08359 YsiA-like protein, C-terminal region CQJ30_13335 PF00440 Bacterial regulatory proteins, tetR family CQJ30_13340 PF00501 AMP-binding enzyme CQJ30_13340 PF13193 AMP-binding enzyme C-terminal domain CQJ30_13345 PF03994 Domain of Unknown Function (DUF350) CQJ30_13350 PF01713 Smr domain CQJ30_13350 PF00488 MutS domain V CQJ30_13355 PF14791 DNA polymerase beta thumb CQJ30_13355 PF02811 PHP domain CQJ30_13355 PF14716 Helix-hairpin-helix domain CQJ30_13360 PF02674 Colicin V production protein CQJ30_13365 PF05164 Cell division protein ZapA CQJ30_13370 PF03483 B3/4 domain CQJ30_13370 PF03484 tRNA synthetase B5 domain CQJ30_13370 PF01588 Putative tRNA binding domain CQJ30_13370 PF03147 Ferredoxin-fold anticodon binding domain CQJ30_13370 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain CQJ30_13375 PF01409 tRNA synthetases class II core domain (F) CQJ30_13375 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain CQJ30_13380 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CQJ30_13385 PF08032 RNA 2'-O ribose methyltransferase substrate binding CQJ30_13385 PF00588 SpoU rRNA Methylase family CQJ30_13390 PF14098 Small, acid-soluble spore protein I CQJ30_13395 PF00753 Metallo-beta-lactamase superfamily CQJ30_13400 PF05343 M42 glutamyl aminopeptidase CQJ30_13405 PF00692 dUTPase CQJ30_13415 PF09335 SNARE associated Golgi protein CQJ30_13420 PF00453 Ribosomal protein L20 CQJ30_13425 PF01632 Ribosomal protein L35 CQJ30_13430 PF05198 Translation initiation factor IF-3, N-terminal domain CQJ30_13430 PF00707 Translation initiation factor IF-3, C-terminal domain CQJ30_13440 PF03129 Anticodon binding domain CQJ30_13440 PF02824 TGS domain CQJ30_13440 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain CQJ30_13440 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CQJ30_13445 PF08812 YtxC-like family CQJ30_13450 PF01695 IstB-like ATP binding protein CQJ30_13450 PF07319 Primosomal protein DnaI N-terminus CQJ30_13455 PF07261 Replication initiation and membrane attachment CQJ30_13460 PF03477 ATP cone domain CQJ30_13470 PF02675 S-adenosylmethionine decarboxylase CQJ30_13475 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain CQJ30_13475 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain CQJ30_13480 PF01121 Dephospho-CoA kinase CQJ30_13485 PF02659 Putative manganese efflux pump CQJ30_13490 PF06827 Zinc finger found in FPG and IleRS CQJ30_13490 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain CQJ30_13490 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain CQJ30_13495 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain CQJ30_13495 PF00476 DNA polymerase family A CQJ30_13495 PF01367 5'-3' exonuclease, C-terminal SAM fold CQJ30_13500 PF01145 SPFH domain / Band 7 family CQJ30_13505 PF01145 SPFH domain / Band 7 family CQJ30_13505 PF12221 Bacterial membrane protein N terminal CQJ30_13510 PF00512 His Kinase A (phospho-acceptor) domain CQJ30_13510 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CQJ30_13510 PF00989 PAS fold CQJ30_13510 PF16736 Single Cache-like CQJ30_13515 PF00486 Transcriptional regulatory protein, C terminal CQJ30_13515 PF00072 Response regulator receiver domain CQJ30_13520 PF00056 lactate/malate dehydrogenase, NAD binding domain CQJ30_13520 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain CQJ30_13525 PF00180 Isocitrate/isopropylmalate dehydrogenase CQJ30_13530 PF00285 Citrate synthase, C-terminal domain CQJ30_13535 PF01594 AI-2E family transporter CQJ30_13540 PF04186 FxsA cytoplasmic membrane protein CQJ30_13545 PF00224 Pyruvate kinase, barrel domain CQJ30_13545 PF00391 PEP-utilising enzyme, mobile domain CQJ30_13545 PF02887 Pyruvate kinase, alpha/beta domain CQJ30_13550 PF00365 Phosphofructokinase CQJ30_13555 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit CQJ30_13560 PF01039 Carboxyl transferase domain CQJ30_13560 PF17848 Acetyl-coA carboxylase zinc finger domain CQJ30_13565 PF07729 FCD domain CQJ30_13565 PF00392 Bacterial regulatory proteins, gntR family CQJ30_13570 PF03949 Malic enzyme, NAD binding domain CQJ30_13570 PF00390 Malic enzyme, N-terminal domain CQJ30_13575 PF02811 PHP domain CQJ30_13575 PF14579 Helix-hairpin-helix motif CQJ30_13575 PF17657 Bacterial DNA polymerase III alpha subunit finger domain CQJ30_13575 PF07733 Bacterial DNA polymerase III alpha NTPase domain CQJ30_13575 PF01336 OB-fold nucleic acid binding domain CQJ30_13580 PF14034 Sporulation protein YtrH CQJ30_13590 PF02272 DHHA1 domain CQJ30_13590 PF01368 DHH family CQJ30_13600 PF07085 DRTGG domain CQJ30_13600 PF00392 Bacterial regulatory proteins, gntR family CQJ30_13600 PF03061 Thioesterase superfamily CQJ30_13600 PF00571 CBS domain CQJ30_13620 PF00557 Metallopeptidase family M24 CQJ30_13620 PF01321 Creatinase/Prolidase N-terminal domain CQJ30_13625 PF00582 Universal stress protein family CQJ30_13640 PF11975 Family 4 glycosyl hydrolase C-terminal domain CQJ30_13640 PF02056 Family 4 glycosyl hydrolase CQJ30_13645 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit CQJ30_13650 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CQJ30_13675 PF02378 Phosphotransferase system, EIIC CQJ30_13680 PF01325 Iron dependent repressor, N-terminal DNA binding domain CQJ30_13680 PF00480 ROK family CQJ30_13685 PF00871 Acetokinase family CQJ30_13690 PF02384 N-6 DNA Methylase CQJ30_13695 PF08534 Redoxin CQJ30_13700 PF09579 Sporulation protein YtfJ (Spore_YtfJ) CQJ30_13710 PF06271 RDD family CQJ30_13715 PF01343 Peptidase family S49 CQJ30_13720 PF00269 Small, acid-soluble spore proteins, alpha/beta type CQJ30_13725 PF02568 Thiamine biosynthesis protein (ThiI) CQJ30_13725 PF02926 THUMP domain CQJ30_13730 PF00266 Aminotransferase class-V CQJ30_13735 PF06160 Septation ring formation regulator, EzrA CQJ30_13740 PF00440 Bacterial regulatory proteins, tetR family CQJ30_13745 PF13185 GAF domain CQJ30_13750 PF00990 Diguanylate cyclase, GGDEF domain CQJ30_13760 PF00163 Ribosomal protein S4/S9 N-terminal domain CQJ30_13760 PF01479 S4 domain CQJ30_13765 PF00885 6,7-dimethyl-8-ribityllumazine synthase CQJ30_13770 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase CQJ30_13770 PF00925 GTP cyclohydrolase II CQJ30_13775 PF00677 Lumazine binding domain CQJ30_13780 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region CQJ30_13780 PF01872 RibD C-terminal domain CQJ30_13785 PF01381 Helix-turn-helix CQJ30_13800 PF01061 ABC-2 type transporter CQJ30_13805 PF03613 PTS system mannose/fructose/sorbose family IID component CQJ30_13810 PF03609 PTS system sorbose-specific iic component CQJ30_13815 PF03830 PTS system sorbose subfamily IIB component CQJ30_13815 PF03610 PTS system fructose IIA component CQJ30_13830 PF01476 LysM domain CQJ30_13830 PF00704 Glycosyl hydrolases family 18 CQJ30_13845 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase CQJ30_13845 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain CQJ30_13870 PF00596 Class II Aldolase and Adducin N-terminal domain CQJ30_13875 PF06134 L-rhamnose isomerase (RhaA) CQJ30_13880 PF00370 FGGY family of carbohydrate kinases, N-terminal domain CQJ30_13880 PF02782 FGGY family of carbohydrate kinases, C-terminal domain CQJ30_13885 PF02311 AraC-like ligand binding domain CQJ30_13885 PF12833 Helix-turn-helix domain CQJ30_13890 PF00005 ABC transporter CQJ30_13895 PF00005 ABC transporter CQJ30_13900 PF02361 Cobalt transport protein CQJ30_13910 PF01048 Phosphorylase superfamily CQJ30_13915 PF01479 S4 domain CQJ30_13915 PF00579 tRNA synthetases class I (W and Y) CQJ30_13930 PF00912 Transglycosylase CQJ30_13930 PF00905 Penicillin binding protein transpeptidase domain CQJ30_13935 PF00501 AMP-binding enzyme CQJ30_13935 PF13193 AMP-binding enzyme C-terminal domain CQJ30_13940 PF00583 Acetyltransferase (GNAT) family CQJ30_13945 PF00571 CBS domain CQJ30_13950 PF00850 Histone deacetylase domain CQJ30_13955 PF13677 Membrane MotB of proton-channel complex MotA/MotB CQJ30_13955 PF00691 OmpA family CQJ30_13960 PF01618 MotA/TolQ/ExbB proton channel family CQJ30_13965 PF00356 Bacterial regulatory proteins, lacI family CQJ30_13970 PF02491 SHS2 domain inserted in FTSA CQJ30_13975 PF01266 FAD dependent oxidoreductase CQJ30_13975 PF00355 Rieske [2Fe-2S] domain CQJ30_13985 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CQJ30_13985 PF02770 Acyl-CoA dehydrogenase, middle domain CQJ30_13985 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CQJ30_14005 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CQJ30_14005 PF02770 Acyl-CoA dehydrogenase, middle domain CQJ30_14005 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CQJ30_14010 PF00108 Thiolase, N-terminal domain CQJ30_14010 PF02803 Thiolase, C-terminal domain CQJ30_14020 PF00158 Sigma-54 interaction domain CQJ30_14025 PF11009 Protein of unknown function (DUF2847) CQJ30_14040 PF08245 Mur ligase middle domain CQJ30_14040 PF01225 Mur ligase family, catalytic domain CQJ30_14040 PF02875 Mur ligase family, glutamate ligase domain CQJ30_14045 PF01580 FtsK/SpoIIIE family CQJ30_14045 PF09397 Ftsk gamma domain CQJ30_14045 PF17854 FtsK alpha domain CQJ30_14055 PF14794 Domain of unknown function (DUF4479) CQJ30_14055 PF01588 Putative tRNA binding domain CQJ30_14060 PF07285 Protein of unknown function (DUF1444) CQJ30_14065 PF00085 Thioredoxin CQJ30_14075 PF01931 Protein of unknown function DUF84 CQJ30_14080 PF05343 M42 glutamyl aminopeptidase CQJ30_14090 PF00753 Metallo-beta-lactamase superfamily CQJ30_14095 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) CQJ30_14095 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 CQJ30_14100 PF02390 Putative methyltransferase CQJ30_14105 PF14165 YtzH-like protein CQJ30_14110 PF01636 Phosphotransferase enzyme family CQJ30_14120 PF02834 LigT like Phosphoesterase CQJ30_14125 PF01063 Amino-transferase class IV CQJ30_14130 PF08220 DeoR-like helix-turn-helix domain CQJ30_14135 PF00849 RNA pseudouridylate synthase CQJ30_14135 PF01479 S4 domain CQJ30_14145 PF14667 Polysaccharide biosynthesis C-terminal domain CQJ30_14145 PF01943 Polysaccharide biosynthesis protein CQJ30_14155 PF10957 Sporulation protein Cse60 CQJ30_14160 PF00581 Rhodanese-like domain CQJ30_14165 PF09334 tRNA synthetases class I (M) CQJ30_14165 PF00133 tRNA synthetases class I (I, L, M and V) CQJ30_14165 PF08264 Anticodon-binding domain of tRNA CQJ30_14165 PF13603 Leucyl-tRNA synthetase, Domain 2 CQJ30_14175 PF04055 Radical SAM superfamily CQJ30_14175 PF06968 Biotin and Thiamin Synthesis associated domain CQJ30_14180 PF02632 BioY family CQJ30_14190 PF07690 Major Facilitator Superfamily CQJ30_14195 PF10732 Protein of unknown function (DUF2524) CQJ30_14200 PF16199 Radical_SAM C-terminal domain CQJ30_14200 PF04055 Radical SAM superfamily CQJ30_14205 PF06962 Putative rRNA methylase CQJ30_14210 PF00296 Luciferase-like monooxygenase CQJ30_14215 PF10776 Protein of unknown function (DUF2600) CQJ30_14220 PF00132 Bacterial transferase hexapeptide (six repeats) CQJ30_14225 PF00970 Oxidoreductase FAD-binding domain CQJ30_14225 PF00042 Globin CQJ30_14225 PF00175 Oxidoreductase NAD-binding domain CQJ30_14230 PF02082 Transcriptional regulator CQJ30_14235 PF02772 S-adenosylmethionine synthetase, central domain CQJ30_14235 PF00438 S-adenosylmethionine synthetase, N-terminal domain CQJ30_14235 PF02773 S-adenosylmethionine synthetase, C-terminal domain CQJ30_14240 PF01293 Phosphoenolpyruvate carboxykinase CQJ30_14245 PF08000 Bacterial PH domain CQJ30_14260 PF00005 ABC transporter CQJ30_14265 PF00528 Binding-protein-dependent transport system inner membrane component CQJ30_14270 PF00293 NUDIX domain CQJ30_14280 PF01063 Amino-transferase class IV CQJ30_14290 PF00210 Ferritin-like domain CQJ30_14295 PF01809 Putative membrane protein insertion efficiency factor CQJ30_14300 PF01297 Zinc-uptake complex component A periplasmic CQJ30_14300 PF09223 ZinT (YodA) periplasmic lipocalin-like zinc-recruitment CQJ30_14305 PF00501 AMP-binding enzyme CQJ30_14305 PF13193 AMP-binding enzyme C-terminal domain CQJ30_14310 PF00378 Enoyl-CoA hydratase/isomerase CQJ30_14315 PF01040 UbiA prenyltransferase family CQJ30_14320 PF00180 Isocitrate/isopropylmalate dehydrogenase CQJ30_14325 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CQJ30_14325 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CQJ30_14330 PF02803 Thiolase, C-terminal domain CQJ30_14330 PF00108 Thiolase, N-terminal domain CQJ30_14335 PF02770 Acyl-CoA dehydrogenase, middle domain CQJ30_14335 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CQJ30_14335 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CQJ30_14340 PF00378 Enoyl-CoA hydratase/isomerase CQJ30_14345 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain CQJ30_14345 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain CQJ30_14350 PF01144 Coenzyme A transferase CQJ30_14355 PF01144 Coenzyme A transferase CQJ30_14360 PF00171 Aldehyde dehydrogenase family CQJ30_14365 PF00155 Aminotransferase class I and II CQJ30_14370 PF02423 Ornithine cyclodeaminase/mu-crystallin family CQJ30_14375 PF01266 FAD dependent oxidoreductase CQJ30_14380 PF17853 GGDEF-like domain CQJ30_14380 PF05651 Putative sugar diacid recognition CQJ30_14380 PF13556 PucR C-terminal helix-turn-helix domain CQJ30_14385 PF03358 NADPH-dependent FMN reductase CQJ30_14390 PF00474 Sodium:solute symporter family CQJ30_14520 PF02308 MgtC family CQJ30_14525 PF05036 Sporulation related domain CQJ30_14525 PF01520 N-acetylmuramoyl-L-alanine amidase CQJ30_14535 PF00694 Aconitase C-terminal domain CQJ30_14540 PF00330 Aconitase family (aconitate hydratase) CQJ30_14545 PF00180 Isocitrate/isopropylmalate dehydrogenase CQJ30_14550 PF08502 LeuA allosteric (dimerisation) domain CQJ30_14550 PF00682 HMGL-like CQJ30_14555 PF01758 Sodium Bile acid symporter family CQJ30_14565 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CQJ30_14565 PF00205 Thiamine pyrophosphate enzyme, central domain CQJ30_14565 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CQJ30_14570 PF10369 Small subunit of acetolactate synthase CQJ30_14570 PF01842 ACT domain CQJ30_14575 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain CQJ30_14575 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain CQJ30_14580 PF00291 Pyridoxal-phosphate dependent enzyme CQJ30_14580 PF13291 ACT domain CQJ30_14585 PF05167 Uncharacterised ACR (DUF711) CQJ30_14595 PF00689 Cation transporting ATPase, C-terminus CQJ30_14595 PF00690 Cation transporter/ATPase, N-terminus CQJ30_14605 PF02080 TrkA-C domain CQJ30_14605 PF02254 TrkA-N domain CQJ30_14615 PF04328 Selenoprotein, putative CQJ30_14625 PF05598 Transposase domain (DUF772) CQJ30_14635 PF17853 GGDEF-like domain CQJ30_14635 PF12833 Helix-turn-helix domain CQJ30_14660 PF01965 DJ-1/PfpI family CQJ30_14665 PF01869 BadF/BadG/BcrA/BcrD ATPase family CQJ30_14670 PF14698 Argininosuccinate lyase C-terminal CQJ30_14670 PF00206 Lyase CQJ30_14675 PF00528 Binding-protein-dependent transport system inner membrane component CQJ30_14690 PF00480 ROK family CQJ30_14710 PF01244 Membrane dipeptidase (Peptidase family M19) CQJ30_14715 PF02254 TrkA-N domain CQJ30_14715 PF07885 Ion channel CQJ30_14720 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 CQJ30_14725 PF00342 Phosphoglucose isomerase CQJ30_14730 PF00465 Iron-containing alcohol dehydrogenase CQJ30_14740 PF04070 Domain of unknown function (DUF378) CQJ30_14745 PF00202 Aminotransferase class-III CQJ30_14750 PF00575 S1 RNA binding domain CQJ30_14760 PF08386 TAP-like protein CQJ30_14760 PF00561 alpha/beta hydrolase fold CQJ30_14765 PF00155 Aminotransferase class I and II CQJ30_14775 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD CQJ30_14780 PF13537 Glutamine amidotransferase domain CQJ30_14780 PF00733 Asparagine synthase CQJ30_14790 PF08810 Kinase associated protein B CQJ30_14795 PF00872 Transposase, Mutator family CQJ30_14805 PF07690 Major Facilitator Superfamily CQJ30_14810 PF03061 Thioesterase superfamily CQJ30_14820 PF00005 ABC transporter CQJ30_14820 PF09383 NIL domain CQJ30_14835 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) CQJ30_14840 PF01899 Na+/H+ ion antiporter subunit CQJ30_14845 PF00361 Proton-conducting membrane transporter CQJ30_14850 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L CQJ30_14860 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus CQJ30_14860 PF13244 Domain of unknown function (DUF4040) CQJ30_14860 PF00361 Proton-conducting membrane transporter CQJ30_14870 PF00589 Phage integrase family CQJ30_14875 PF00056 lactate/malate dehydrogenase, NAD binding domain CQJ30_14875 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain CQJ30_14880 PF07690 Major Facilitator Superfamily CQJ30_14895 PF04285 Protein of unknown function (DUF444) CQJ30_14900 PF06798 PrkA serine protein kinase C-terminal domain CQJ30_14900 PF08298 PrkA AAA domain CQJ30_14905 PF00881 Nitroreductase family CQJ30_14910 PF00588 SpoU rRNA Methylase family CQJ30_14915 PF12671 Putative amidase domain CQJ30_14920 PF08331 Domain of unknown function (DUF1730) CQJ30_14925 PF06725 3D domain CQJ30_14935 PF07992 Pyridine nucleotide-disulphide oxidoreductase CQJ30_14940 PF01521 Iron-sulphur cluster biosynthesis CQJ30_14945 PF07992 Pyridine nucleotide-disulphide oxidoreductase CQJ30_14950 PF07315 Protein of unknown function (DUF1462) CQJ30_14955 PF01106 NifU-like domain CQJ30_14960 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CQJ30_14960 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CQJ30_14970 PF04608 Phosphatidylglycerophosphatase A CQJ30_14975 PF13344 Haloacid dehalogenase-like hydrolase CQJ30_14980 PF01934 Protein of unknown function DUF86 CQJ30_14985 PF06265 Protein of unknown function (DUF1027) CQJ30_14990 PF01551 Peptidase family M23 CQJ30_14995 PF13458 Periplasmic binding protein CQJ30_15000 PF02653 Branched-chain amino acid transport system / permease component CQJ30_15005 PF02653 Branched-chain amino acid transport system / permease component CQJ30_15005 PF11862 Domain of unknown function (DUF3382) CQJ30_15010 PF12399 Branched-chain amino acid ATP-binding cassette transporter CQJ30_15010 PF00005 ABC transporter CQJ30_15015 PF00005 ABC transporter CQJ30_15025 PF09560 Sporulation protein YunB (Spo_YunB) CQJ30_15030 PF08827 Domain of unknown function (DUF1805) CQJ30_15035 PF02872 5'-nucleotidase, C-terminal domain CQJ30_15040 PF01842 ACT domain CQJ30_15040 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CQJ30_15040 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CQJ30_15045 PF00266 Aminotransferase class-V CQJ30_15050 PF01458 Uncharacterized protein family (UPF0051) CQJ30_15055 PF01592 NifU-like N terminal domain CQJ30_15060 PF00266 Aminotransferase class-V CQJ30_15065 PF01458 Uncharacterized protein family (UPF0051) CQJ30_15070 PF00005 ABC transporter CQJ30_15075 PF03180 NLPA lipoprotein CQJ30_15080 PF00528 Binding-protein-dependent transport system inner membrane component CQJ30_15085 PF09383 NIL domain CQJ30_15085 PF00005 ABC transporter CQJ30_15095 PF00085 Thioredoxin CQJ30_15100 PF01751 Toprim domain CQJ30_15105 PF01597 Glycine cleavage H-protein CQJ30_15110 PF03960 ArsC family CQJ30_15115 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CQJ30_15115 PF02770 Acyl-CoA dehydrogenase, middle domain CQJ30_15115 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CQJ30_15120 PF00108 Thiolase, N-terminal domain CQJ30_15120 PF02803 Thiolase, C-terminal domain CQJ30_15125 PF00378 Enoyl-CoA hydratase/isomerase CQJ30_15125 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain CQJ30_15125 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain CQJ30_15135 PF07875 Coat F domain CQJ30_15140 PF01594 AI-2E family transporter CQJ30_15145 PF07293 Protein of unknown function (DUF1450) CQJ30_15160 PF00005 ABC transporter CQJ30_15170 PF04542 Sigma-70 region 2 CQJ30_15170 PF08281 Sigma-70, region 4 CQJ30_15180 PF00005 ABC transporter CQJ30_15185 PF00528 Binding-protein-dependent transport system inner membrane component CQJ30_15190 PF00497 Bacterial extracellular solute-binding proteins, family 3 CQJ30_15195 PF00037 4Fe-4S binding domain CQJ30_15210 PF01923 Cobalamin adenosyltransferase CQJ30_15220 PF02654 Cobalamin-5-phosphate synthase CQJ30_15225 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase CQJ30_15240 PF00155 Aminotransferase class I and II CQJ30_15245 PF03186 CobD/Cbib protein CQJ30_15250 PF00005 ABC transporter CQJ30_15255 PF01032 FecCD transport family CQJ30_15260 PF01497 Periplasmic binding protein CQJ30_15270 PF00892 EamA-like transporter family CQJ30_15290 PF00005 ABC transporter CQJ30_15295 PF00005 ABC transporter CQJ30_15295 PF12704 MacB-like periplasmic core domain CQJ30_15295 PF02687 FtsX-like permease family CQJ30_15310 PF00583 Acetyltransferase (GNAT) family CQJ30_15355 PF00092 von Willebrand factor type A domain CQJ30_15375 PF00437 Type II/IV secretion system protein CQJ30_15400 PF02073 Thermophilic metalloprotease (M29) CQJ30_15405 PF08338 Domain of unknown function (DUF1731) CQJ30_15405 PF01370 NAD dependent epimerase/dehydratase family CQJ30_15410 PF13382 Adenine deaminase C-terminal domain CQJ30_15410 PF01979 Amidohydrolase family CQJ30_15420 PF00176 SNF2 family N-terminal domain CQJ30_15420 PF00271 Helicase conserved C-terminal domain CQJ30_15420 PF12419 SNF2 Helicase protein CQJ30_15440 PF00117 Glutamine amidotransferase class-I CQJ30_15440 PF03352 Methyladenine glycosylase CQJ30_15440 PF13302 Acetyltransferase (GNAT) domain CQJ30_15440 PF13673 Acetyltransferase (GNAT) domain CQJ30_15440 PF00958 GMP synthase C terminal domain CQJ30_15450 PF00392 Bacterial regulatory proteins, gntR family CQJ30_15455 PF00005 ABC transporter CQJ30_15465 PF01810 LysE type translocator CQJ30_15475 PF00155 Aminotransferase class I and II CQJ30_15475 PF00392 Bacterial regulatory proteins, gntR family CQJ30_15485 PF01381 Helix-turn-helix CQJ30_15490 PF00892 EamA-like transporter family CQJ30_15495 PF00005 ABC transporter CQJ30_15495 PF02687 FtsX-like permease family CQJ30_15495 PF12704 MacB-like periplasmic core domain CQJ30_15500 PF00005 ABC transporter CQJ30_15505 PF00512 His Kinase A (phospho-acceptor) domain CQJ30_15505 PF00672 HAMP domain CQJ30_15505 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CQJ30_15510 PF00486 Transcriptional regulatory protein, C terminal CQJ30_15510 PF00072 Response regulator receiver domain CQJ30_15515 PF00293 NUDIX domain CQJ30_15545 PF00486 Transcriptional regulatory protein, C terminal CQJ30_15545 PF00072 Response regulator receiver domain CQJ30_15550 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CQJ30_15555 PF00005 ABC transporter CQJ30_15560 PF02687 FtsX-like permease family CQJ30_15570 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CQJ30_15570 PF00672 HAMP domain CQJ30_15570 PF02743 Cache domain CQJ30_15630 PF13005 zinc-finger binding domain of transposase IS66 CQJ30_15630 PF13007 Transposase C of IS166 homeodomain CQJ30_15630 PF13817 IS66 C-terminal element CQJ30_15630 PF03050 Transposase IS66 family CQJ30_15665 PF18395 Cas3 C-terminal domain CQJ30_15665 PF18019 HD domain CQJ30_15665 PF00270 DEAD/DEAH box helicase CQJ30_15695 PF00874 PRD domain CQJ30_15695 PF05043 Mga helix-turn-helix domain CQJ30_15695 PF08279 HTH domain CQJ30_15695 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CQJ30_15700 PF00232 Glycosyl hydrolase family 1 CQJ30_15705 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CQJ30_15705 PF02378 Phosphotransferase system, EIIC CQJ30_15715 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CQJ30_15720 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit CQJ30_15725 PF01546 Peptidase family M20/M25/M40 CQJ30_15730 PF00248 Aldo/keto reductase family CQJ30_15735 PF05225 helix-turn-helix, Psq domain CQJ30_15735 PF02810 SEC-C motif CQJ30_15745 PF01668 SmpB protein CQJ30_15755 PF00575 S1 RNA binding domain CQJ30_15755 PF08206 Ribonuclease B OB domain CQJ30_15755 PF17876 Cold shock domain CQJ30_15755 PF00773 RNB domain CQJ30_15760 PF12146 Serine aminopeptidase, S33 CQJ30_15765 PF03840 Preprotein translocase SecG subunit CQJ30_15795 PF00149 Calcineurin-like phosphoesterase CQJ30_15800 PF00149 Calcineurin-like phosphoesterase CQJ30_15805 PF07282 Putative transposase DNA-binding domain CQJ30_15805 PF12323 Helix-turn-helix domain CQJ30_15805 PF01385 Probable transposase CQJ30_15825 PF03952 Enolase, N-terminal domain CQJ30_15825 PF00113 Enolase, C-terminal TIM barrel domain CQJ30_15830 PF06415 BPG-independent PGAM N-terminus (iPGM_N) CQJ30_15830 PF01676 Metalloenzyme superfamily CQJ30_15835 PF00121 Triosephosphate isomerase CQJ30_15840 PF00162 Phosphoglycerate kinase CQJ30_15845 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain CQJ30_15845 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain CQJ30_15850 PF04198 Putative sugar-binding domain CQJ30_15860 PF04963 Sigma-54 factor, core binding domain CQJ30_15860 PF00309 Sigma-54 factor, Activator interacting domain (AID) CQJ30_15860 PF04552 Sigma-54, DNA binding domain CQJ30_15875 PF00574 Clp protease CQJ30_15880 PF00381 PTS HPr component phosphorylation site CQJ30_15885 PF10298 WhiA N-terminal LAGLIDADG-like domain CQJ30_15885 PF14527 WhiA LAGLIDADG-like domain CQJ30_15885 PF02650 WhiA C-terminal HTH domain CQJ30_15890 PF01933 Uncharacterised protein family UPF0052 CQJ30_15895 PF03668 P-loop ATPase protein family CQJ30_15900 PF00293 NUDIX domain CQJ30_15905 PF07992 Pyridine nucleotide-disulphide oxidoreductase CQJ30_15915 PF14602 Hexapeptide repeat of succinyl-transferase CQJ30_15920 PF13419 Haloacid dehalogenase-like hydrolase CQJ30_15925 PF07670 Nucleoside recognition CQJ30_15930 PF01790 Prolipoprotein diacylglyceryl transferase CQJ30_15935 PF07475 HPr Serine kinase C-terminal domain CQJ30_15935 PF02603 HPr Serine kinase N terminus CQJ30_15955 PF01022 Bacterial regulatory protein, arsR family CQJ30_15960 PF07687 Peptidase dimerisation domain CQJ30_15960 PF01546 Peptidase family M20/M25/M40 CQJ30_15970 PF01043 SecA preprotein cross-linking domain CQJ30_15970 PF02810 SEC-C motif CQJ30_15970 PF07516 SecA Wing and Scaffold domain CQJ30_15970 PF07517 SecA DEAD-like domain CQJ30_16020 PF00665 Integrase core domain CQJ30_16020 PF02796 Helix-turn-helix domain of resolvase CQJ30_16025 PF01695 IstB-like ATP binding protein CQJ30_16045 PF17755 UvrA DNA-binding domain CQJ30_16045 PF17760 UvrA interaction domain CQJ30_16045 PF00005 ABC transporter CQJ30_16050 PF02151 UvrB/uvrC motif CQJ30_16050 PF17757 UvrB interaction domain CQJ30_16050 PF04851 Type III restriction enzyme, res subunit CQJ30_16050 PF00271 Helicase conserved C-terminal domain CQJ30_16050 PF12344 Ultra-violet resistance protein B CQJ30_16055 PF09964 Uncharacterized protein conserved in bacteria (DUF2198) CQJ30_16065 PF03176 MMPL family CQJ30_16070 PF01047 MarR family CQJ30_16075 PF00403 Heavy-metal-associated domain CQJ30_16080 PF00403 Heavy-metal-associated domain CQJ30_16095 PF01869 BadF/BadG/BcrA/BcrD ATPase family CQJ30_16105 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CQJ30_16120 PF01022 Bacterial regulatory protein, arsR family CQJ30_16125 PF01451 Low molecular weight phosphotyrosine protein phosphatase CQJ30_16130 PF17820 PDZ domain CQJ30_16135 PF03572 Peptidase family S41 CQJ30_16135 PF01471 Putative peptidoglycan binding domain CQJ30_16135 PF17820 PDZ domain CQJ30_16140 PF12323 Helix-turn-helix domain CQJ30_16140 PF01385 Probable transposase CQJ30_16140 PF07282 Putative transposase DNA-binding domain CQJ30_16145 PF01709 Transcriptional regulator CQJ30_16150 PF00877 NlpC/P60 family CQJ30_16155 PF02687 FtsX-like permease family CQJ30_16155 PF18075 FtsX extracellular domain CQJ30_16160 PF00005 ABC transporter CQJ30_16165 PF13442 Cytochrome C oxidase, cbb3-type, subunit III CQJ30_16170 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) CQJ30_16170 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 CQJ30_16180 PF07516 SecA Wing and Scaffold domain CQJ30_16180 PF02810 SEC-C motif CQJ30_16180 PF07517 SecA DEAD-like domain CQJ30_16180 PF01043 SecA preprotein cross-linking domain CQJ30_16185 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein CQJ30_16185 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus CQJ30_16195 PF02561 Flagellar protein FliS CQJ30_16200 PF02465 Flagellar hook-associated protein 2 N-terminus CQJ30_16200 PF07195 Flagellar hook-associated protein 2 C-terminus CQJ30_16205 PF03646 FlaG protein CQJ30_16215 PF07690 Major Facilitator Superfamily CQJ30_16220 PF02780 Transketolase, C-terminal domain CQJ30_16220 PF00456 Transketolase, thiamine diphosphate binding domain CQJ30_16220 PF02779 Transketolase, pyrimidine binding domain CQJ30_16225 PF00923 Transaldolase/Fructose-6-phosphate aldolase CQJ30_16230 PF01544 CorA-like Mg2+ transporter protein CQJ30_16235 PF07690 Major Facilitator Superfamily CQJ30_16235 PF00083 Sugar (and other) transporter CQJ30_16250 PF00708 Acylphosphatase CQJ30_16255 PF02743 Cache domain CQJ30_16255 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CQJ30_16255 PF00672 HAMP domain CQJ30_16275 PF13005 zinc-finger binding domain of transposase IS66 CQJ30_16275 PF13817 IS66 C-terminal element CQJ30_16275 PF03050 Transposase IS66 family CQJ30_16275 PF13007 Transposase C of IS166 homeodomain CQJ30_16295 PF13181 Tetratricopeptide repeat CQJ30_16295 PF00535 Glycosyl transferase family 2 CQJ30_16300 PF00700 Bacterial flagellin C-terminal helical region CQJ30_16300 PF00669 Bacterial flagellin N-terminal helical region CQJ30_16310 PF02623 FliW protein CQJ30_16320 PF00669 Bacterial flagellin N-terminal helical region CQJ30_16320 PF00700 Bacterial flagellin C-terminal helical region CQJ30_16325 PF06429 Flagellar basal body rod FlgEFG protein C-terminal CQJ30_16325 PF00460 Flagella basal body rod protein CQJ30_16335 PF04316 Anti-sigma-28 factor, FlgM CQJ30_16345 PF00156 Phosphoribosyl transferase domain CQJ30_16350 PF07282 Putative transposase DNA-binding domain CQJ30_16350 PF01385 Probable transposase CQJ30_16350 PF12323 Helix-turn-helix domain CQJ30_16360 PF04851 Type III restriction enzyme, res subunit CQJ30_16360 PF00271 Helicase conserved C-terminal domain CQJ30_16380 PF02645 Uncharacterised protein, DegV family COG1307 CQJ30_16385 PF00872 Transposase, Mutator family CQJ30_16390 PF00872 Transposase, Mutator family CQJ30_16400 PF00196 Bacterial regulatory proteins, luxR family CQJ30_16400 PF00072 Response regulator receiver domain CQJ30_16405 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CQJ30_16405 PF07730 Histidine kinase CQJ30_16405 PF05384 Sensor protein DegS CQJ30_16410 PF01205 Uncharacterized protein family UPF0029 CQJ30_16410 PF09186 Domain of unknown function (DUF1949) CQJ30_16415 PF04203 Sortase domain CQJ30_16420 PF01966 HD domain CQJ30_16420 PF00672 HAMP domain CQJ30_16425 PF03816 Cell envelope-related transcriptional attenuator domain CQJ30_16435 PF13732 Domain of unknown function (DUF4162) CQJ30_16435 PF00005 ABC transporter CQJ30_16440 PF02817 e3 binding domain CQJ30_16440 PF00364 Biotin-requiring enzyme CQJ30_16440 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) CQJ30_16445 PF16870 2-oxoglutarate dehydrogenase C-terminal CQJ30_16445 PF00676 Dehydrogenase E1 component CQJ30_16445 PF02779 Transketolase, pyrimidine binding domain CQJ30_16445 PF16078 2-oxoglutarate dehydrogenase N-terminus CQJ30_16455 PF03167 Uracil DNA glycosylase superfamily CQJ30_16470 PF00378 Enoyl-CoA hydratase/isomerase CQJ30_16480 PF02515 CoA-transferase family III CQJ30_16485 PF00108 Thiolase, N-terminal domain CQJ30_16485 PF02803 Thiolase, C-terminal domain CQJ30_16490 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CQJ30_16490 PF02770 Acyl-CoA dehydrogenase, middle domain CQJ30_16490 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CQJ30_16495 PF00378 Enoyl-CoA hydratase/isomerase CQJ30_16510 PF01037 Lrp/AsnC ligand binding domain CQJ30_16515 PF00155 Aminotransferase class I and II CQJ30_16525 PF01546 Peptidase family M20/M25/M40 CQJ30_16525 PF07687 Peptidase dimerisation domain CQJ30_16530 PF14748 Pyrroline-5-carboxylate reductase dimerisation CQJ30_16530 PF03807 NADP oxidoreductase coenzyme F420-dependent CQJ30_16560 PF03180 NLPA lipoprotein CQJ30_16565 PF00528 Binding-protein-dependent transport system inner membrane component CQJ30_16570 PF09383 NIL domain CQJ30_16570 PF00005 ABC transporter CQJ30_16580 PF00795 Carbon-nitrogen hydrolase CQJ30_16585 PF00155 Aminotransferase class I and II CQJ30_16590 PF03099 Biotin/lipoate A/B protein ligase family CQJ30_16595 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family CQJ30_16595 PF04055 Radical SAM superfamily CQJ30_16605 PF00872 Transposase, Mutator family CQJ30_16615 PF07672 Mycoplasma MFS transporter CQJ30_16620 PF00288 GHMP kinases N terminal domain CQJ30_16620 PF08544 GHMP kinases C terminal CQJ30_16625 PF00291 Pyridoxal-phosphate dependent enzyme CQJ30_16630 PF03447 Homoserine dehydrogenase, NAD binding domain CQJ30_16630 PF00742 Homoserine dehydrogenase CQJ30_16630 PF01842 ACT domain CQJ30_16640 PF00672 HAMP domain CQJ30_16640 PF12729 Four helix bundle sensory module for signal transduction CQJ30_16640 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CQJ30_16645 PF13419 Haloacid dehalogenase-like hydrolase CQJ30_16650 PF00356 Bacterial regulatory proteins, lacI family CQJ30_16665 PF03109 ABC1 family CQJ30_16675 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase CQJ30_16680 PF01979 Amidohydrolase family CQJ30_16685 PF01380 SIS domain CQJ30_16685 PF01418 Helix-turn-helix domain, rpiR family CQJ30_16690 PF04131 Putative N-acetylmannosamine-6-phosphate epimerase CQJ30_16695 PF01385 Probable transposase CQJ30_16695 PF12323 Helix-turn-helix domain CQJ30_16695 PF07282 Putative transposase DNA-binding domain CQJ30_16715 PF02525 Flavodoxin-like fold CQJ30_16730 PF03932 CutC family CQJ30_16745 PF07282 Putative transposase DNA-binding domain CQJ30_16745 PF01385 Probable transposase CQJ30_16745 PF12323 Helix-turn-helix domain CQJ30_16765 PF01053 Cys/Met metabolism PLP-dependent enzyme CQJ30_16770 PF02445 Quinolinate synthetase A protein CQJ30_16775 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain CQJ30_16775 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain CQJ30_16780 PF00890 FAD binding domain CQJ30_16780 PF02910 Fumarate reductase flavoprotein C-term CQJ30_16785 PF00266 Aminotransferase class-V CQJ30_16790 PF02829 3H domain CQJ30_16790 PF08279 HTH domain CQJ30_16795 PF01566 Natural resistance-associated macrophage protein CQJ30_16810 PF08240 Alcohol dehydrogenase GroES-like domain CQJ30_16810 PF00107 Zinc-binding dehydrogenase CQJ30_16815 PF11975 Family 4 glycosyl hydrolase C-terminal domain CQJ30_16815 PF02056 Family 4 glycosyl hydrolase CQJ30_16825 PF02378 Phosphotransferase system, EIIC CQJ30_16835 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit CQJ30_16845 PF01869 BadF/BadG/BcrA/BcrD ATPase family CQJ30_16850 PF03702 Anhydro-N-acetylmuramic acid kinase CQJ30_16855 PF01380 SIS domain CQJ30_16860 PF01418 Helix-turn-helix domain, rpiR family CQJ30_16860 PF01380 SIS domain CQJ30_16865 PF02638 Glycosyl hydrolase-like 10 CQJ30_16875 PF00232 Glycosyl hydrolase family 1 CQJ30_16880 PF00356 Bacterial regulatory proteins, lacI family CQJ30_16885 PF00528 Binding-protein-dependent transport system inner membrane component CQJ30_16890 PF00528 Binding-protein-dependent transport system inner membrane component CQJ30_16895 PF13416 Bacterial extracellular solute-binding protein CQJ30_16905 PF13580 SIS domain CQJ30_16910 PF03611 PTS system sugar-specific permease component CQJ30_16915 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CQJ30_16920 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CQJ30_16925 PF03123 CAT RNA binding domain CQJ30_16925 PF00874 PRD domain CQJ30_16930 PF01266 FAD dependent oxidoreductase CQJ30_16930 PF16901 C-terminal domain of alpha-glycerophosphate oxidase CQJ30_16935 PF02782 FGGY family of carbohydrate kinases, C-terminal domain CQJ30_16935 PF00370 FGGY family of carbohydrate kinases, N-terminal domain CQJ30_16940 PF00230 Major intrinsic protein CQJ30_16945 PF04309 Glycerol-3-phosphate responsive antiterminator CQJ30_16950 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CQJ30_16950 PF00672 HAMP domain CQJ30_16950 PF02743 Cache domain CQJ30_16960 PF08361 MAATS-type transcriptional repressor, C-terminal region CQJ30_16960 PF00440 Bacterial regulatory proteins, tetR family CQJ30_16965 PF01408 Oxidoreductase family, NAD-binding Rossmann fold CQJ30_16965 PF02894 Oxidoreductase family, C-terminal alpha/beta domain CQJ30_16975 PF01053 Cys/Met metabolism PLP-dependent enzyme CQJ30_16980 PF01053 Cys/Met metabolism PLP-dependent enzyme CQJ30_16990 PF00005 ABC transporter CQJ30_16990 PF12558 ATP-binding cassette cobalt transporter CQJ30_16995 PF07155 ECF-type riboflavin transporter, S component CQJ30_17005 PF00480 ROK family CQJ30_17010 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CQJ30_17015 PF02378 Phosphotransferase system, EIIC CQJ30_17020 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit CQJ30_17025 PF00232 Glycosyl hydrolase family 1 CQJ30_17030 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CQJ30_17030 PF00874 PRD domain CQJ30_17030 PF08279 HTH domain CQJ30_17030 PF05043 Mga helix-turn-helix domain CQJ30_17040 PF02954 Bacterial regulatory protein, Fis family CQJ30_17040 PF00158 Sigma-54 interaction domain CQJ30_17040 PF00989 PAS fold CQJ30_17045 PF00171 Aldehyde dehydrogenase family CQJ30_17050 PF01619 Proline dehydrogenase CQJ30_17065 PF05651 Putative sugar diacid recognition CQJ30_17065 PF13556 PucR C-terminal helix-turn-helix domain CQJ30_17065 PF17853 GGDEF-like domain CQJ30_17080 PF13556 PucR C-terminal helix-turn-helix domain CQJ30_17080 PF06018 CodY GAF-like domain CQJ30_17080 PF17853 GGDEF-like domain CQJ30_17085 PF02595 Glycerate kinase family CQJ30_17090 PF02447 GntP family permease CQJ30_17095 PF00375 Sodium:dicarboxylate symporter family CQJ30_17100 PF13419 Haloacid dehalogenase-like hydrolase CQJ30_17110 PF12833 Helix-turn-helix domain CQJ30_17110 PF06445 GyrI-like small molecule binding domain CQJ30_17115 PF01238 Phosphomannose isomerase type I CQJ30_17140 PF00149 Calcineurin-like phosphoesterase CQJ30_17140 PF02872 5'-nucleotidase, C-terminal domain CQJ30_17145 PF02403 Seryl-tRNA synthetase N-terminal domain CQJ30_17145 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CQJ30_17155 PF03315 Serine dehydratase beta chain CQJ30_17155 PF01842 ACT domain CQJ30_17160 PF03313 Serine dehydratase alpha chain CQJ30_17170 PF01476 LysM domain CQJ30_17170 PF06725 3D domain CQJ30_17170 PF01476 LysM domain CQJ30_17170 PF06725 3D domain CQJ30_17215 PF00893 Small Multidrug Resistance protein CQJ30_17220 PF00893 Small Multidrug Resistance protein CQJ30_17235 PF02556 Preprotein translocase subunit SecB CQJ30_17240 PF07286 Protein of unknown function (DUF1445) CQJ30_17245 PF01566 Natural resistance-associated macrophage protein CQJ30_17250 PF03746 LamB/YcsF family CQJ30_17255 PF02626 Carboxyltransferase domain, subdomain A and B CQJ30_17260 PF02682 Carboxyltransferase domain, subdomain C and D CQJ30_17270 PF00375 Sodium:dicarboxylate symporter family CQJ30_17285 PF12323 Helix-turn-helix domain CQJ30_17285 PF07282 Putative transposase DNA-binding domain CQJ30_17285 PF01385 Probable transposase CQJ30_17305 PF00528 Binding-protein-dependent transport system inner membrane component CQJ30_17310 PF00528 Binding-protein-dependent transport system inner membrane component CQJ30_17315 PF01547 Bacterial extracellular solute-binding protein CQJ30_17325 PF02233 NAD(P) transhydrogenase beta subunit CQJ30_17330 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch CQJ30_17330 PF01262 Alanine dehydrogenase/PNT, C-terminal domain CQJ30_17330 PF05222 Alanine dehydrogenase/PNT, N-terminal domain CQJ30_17350 PF18755 Restriction Enzyme Adenine Methylase Associated CQJ30_17350 PF01555 DNA methylase CQJ30_17355 PF02661 Fic/DOC family CQJ30_17355 PF13784 Fic/DOC family N-terminal CQJ30_17370 PF05043 Mga helix-turn-helix domain CQJ30_17370 PF00874 PRD domain CQJ30_17370 PF08279 HTH domain CQJ30_17370 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CQJ30_17370 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CQJ30_17375 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CQJ30_17380 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CQJ30_17385 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CQJ30_17415 PF01116 Fructose-bisphosphate aldolase class-II CQJ30_17435 PF02782 FGGY family of carbohydrate kinases, C-terminal domain CQJ30_17435 PF00370 FGGY family of carbohydrate kinases, N-terminal domain CQJ30_17440 PF08240 Alcohol dehydrogenase GroES-like domain CQJ30_17440 PF00107 Zinc-binding dehydrogenase CQJ30_17445 PF03613 PTS system mannose/fructose/sorbose family IID component CQJ30_17450 PF03609 PTS system sorbose-specific iic component CQJ30_17455 PF03830 PTS system sorbose subfamily IIB component CQJ30_17460 PF03830 PTS system sorbose subfamily IIB component CQJ30_17460 PF03610 PTS system fructose IIA component CQJ30_17465 PF01116 Fructose-bisphosphate aldolase class-II CQJ30_17480 PF18348 Bacterial dipeptidyl-peptidase Sh3 domain CQJ30_17480 PF00877 NlpC/P60 family CQJ30_17485 PF13378 Enolase C-terminal domain-like CQJ30_17485 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain CQJ30_17510 PF01116 Fructose-bisphosphate aldolase class-II CQJ30_17515 PF01116 Fructose-bisphosphate aldolase class-II CQJ30_17520 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CQJ30_17525 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CQJ30_17530 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CQJ30_17545 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain CQJ30_17545 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain CQJ30_17545 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain CQJ30_17560 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CQJ30_17565 PF02378 Phosphotransferase system, EIIC CQJ30_17565 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CQJ30_17570 PF01116 Fructose-bisphosphate aldolase class-II CQJ30_17575 PF08220 DeoR-like helix-turn-helix domain CQJ30_17575 PF00455 DeoR C terminal sensor domain CQJ30_17585 PF00535 Glycosyl transferase family 2 CQJ30_17590 PF13439 Glycosyltransferase Family 4 CQJ30_17590 PF00534 Glycosyl transferases group 1 CQJ30_17600 PF13439 Glycosyltransferase Family 4 CQJ30_17600 PF00534 Glycosyl transferases group 1 CQJ30_17605 PF02397 Bacterial sugar transferase CQJ30_17610 PF01370 NAD dependent epimerase/dehydratase family CQJ30_17620 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family CQJ30_17625 PF02719 Polysaccharide biosynthesis protein CQJ30_17630 PF00483 Nucleotidyl transferase CQJ30_17640 PF13614 AAA domain CQJ30_17645 PF13807 G-rich domain on putative tyrosine kinase CQJ30_17645 PF02706 Chain length determinant protein CQJ30_17665 PF00654 Voltage gated chloride channel CQJ30_17675 PF02872 5'-nucleotidase, C-terminal domain CQJ30_17675 PF00149 Calcineurin-like phosphoesterase CQJ30_17715 PF03816 Cell envelope-related transcriptional attenuator domain CQJ30_17720 PF03816 Cell envelope-related transcriptional attenuator domain CQJ30_17725 PF00884 Sulfatase CQJ30_17735 PF04138 GtrA-like protein CQJ30_17775 PF04122 Putative cell wall binding repeat 2 CQJ30_17775 PF01520 N-acetylmuramoyl-L-alanine amidase CQJ30_17780 PF05036 Sporulation related domain CQJ30_17780 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase CQJ30_17780 PF08239 Bacterial SH3 domain CQJ30_17800 PF00535 Glycosyl transferase family 2 CQJ30_17820 PF00535 Glycosyl transferase family 2 CQJ30_17825 PF00483 Nucleotidyl transferase CQJ30_17830 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase CQJ30_17835 PF16363 GDP-mannose 4,6 dehydratase CQJ30_17840 PF04321 RmlD substrate binding domain CQJ30_17850 PF00953 Glycosyl transferase family 4 CQJ30_17855 PF00953 Glycosyl transferase family 4 CQJ30_17860 PF00483 Nucleotidyl transferase CQJ30_17870 PF04434 SWIM zinc finger CQJ30_17875 PF00176 SNF2 family N-terminal domain CQJ30_17875 PF12419 SNF2 Helicase protein CQJ30_17875 PF00271 Helicase conserved C-terminal domain CQJ30_17910 PF00436 Single-strand binding protein family CQJ30_17925 PF07977 FabA-like domain CQJ30_17935 PF06429 Flagellar basal body rod FlgEFG protein C-terminal CQJ30_17935 PF00460 Flagella basal body rod protein CQJ30_17940 PF06429 Flagellar basal body rod FlgEFG protein C-terminal CQJ30_17940 PF00460 Flagella basal body rod protein CQJ30_17950 PF12116 Stage III sporulation protein D CQJ30_17955 PF01551 Peptidase family M23 CQJ30_17965 PF08486 Stage II sporulation protein CQJ30_17970 PF14140 YpzI-like protein CQJ30_17975 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) CQJ30_17985 PF06612 Protein of unknown function (DUF1146) CQJ30_17990 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain CQJ30_17990 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain CQJ30_17995 PF02874 ATP synthase alpha/beta family, beta-barrel domain CQJ30_17995 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CQJ30_18000 PF00231 ATP synthase CQJ30_18005 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CQJ30_18005 PF02874 ATP synthase alpha/beta family, beta-barrel domain CQJ30_18005 PF00306 ATP synthase alpha/beta chain, C terminal domain CQJ30_18010 PF00213 ATP synthase delta (OSCP) subunit CQJ30_18015 PF00430 ATP synthase B/B' CF(0) CQJ30_18020 PF00137 ATP synthase subunit C CQJ30_18025 PF00119 ATP synthase A chain CQJ30_18030 PF03899 ATP synthase I chain CQJ30_18035 PF05922 Peptidase inhibitor I9 CQJ30_18035 PF02225 PA domain CQJ30_18035 PF13860 FlgD Ig-like domain CQJ30_18035 PF00082 Subtilase family CQJ30_18050 PF02417 Chromate transporter CQJ30_18055 PF02417 Chromate transporter CQJ30_18065 PF01037 Lrp/AsnC ligand binding domain CQJ30_18070 PF00528 Binding-protein-dependent transport system inner membrane component CQJ30_18080 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CQJ30_18085 PF00005 ABC transporter CQJ30_18085 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CQJ30_18090 PF00005 ABC transporter CQJ30_18090 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CQJ30_18100 PF02796 Helix-turn-helix domain of resolvase CQJ30_18100 PF00665 Integrase core domain CQJ30_18105 PF01695 IstB-like ATP binding protein CQJ30_18110 PF00464 Serine hydroxymethyltransferase CQJ30_18115 PF04260 Protein of unknown function (DUF436) CQJ30_18120 PF02502 Ribose/Galactose Isomerase CQJ30_18125 PF02743 Cache domain CQJ30_18125 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CQJ30_18125 PF00672 HAMP domain CQJ30_18130 PF01451 Low molecular weight phosphotyrosine protein phosphatase CQJ30_18135 PF02659 Putative manganese efflux pump CQJ30_18140 PF01300 Telomere recombination CQJ30_18140 PF03481 Putative GTP-binding controlling metal-binding CQJ30_18145 PF09551 Stage II sporulation protein R (spore_II_R) CQJ30_18150 PF13847 Methyltransferase domain CQJ30_18150 PF17827 PrmC N-terminal domain CQJ30_18155 PF03462 PCRF domain CQJ30_18155 PF00472 RF-1 domain CQJ30_18160 PF00265 Thymidine kinase CQJ30_18165 PF01197 Ribosomal protein L31 CQJ30_18170 PF07497 Rho termination factor, RNA-binding domain CQJ30_18170 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CQJ30_18170 PF07498 Rho termination factor, N-terminal domain CQJ30_18175 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded CQJ30_18180 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) CQJ30_18185 PF01116 Fructose-bisphosphate aldolase class-II CQJ30_18190 PF00072 Response regulator receiver domain CQJ30_18210 PF00005 ABC transporter CQJ30_18215 PF18698 Histidine kinase sensor domain CQJ30_18215 PF00989 PAS fold CQJ30_18215 PF00672 HAMP domain CQJ30_18215 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CQJ30_18215 PF00512 His Kinase A (phospho-acceptor) domain CQJ30_18220 PF00486 Transcriptional regulatory protein, C terminal CQJ30_18220 PF00072 Response regulator receiver domain CQJ30_18225 PF05147 Lanthionine synthetase C-like protein CQJ30_18230 PF00005 ABC transporter CQJ30_18235 PF04738 Lantibiotic dehydratase, N terminus CQJ30_18235 PF14028 Lantibiotic biosynthesis dehydratase C-term CQJ30_18240 PF02052 Gallidermin CQJ30_18250 PF00117 Glutamine amidotransferase class-I CQJ30_18250 PF06418 CTP synthase N-terminus CQJ30_18255 PF05066 HB1, ASXL, restriction endonuclease HTH domain CQJ30_18260 PF02310 B12 binding domain CQJ30_18260 PF01642 Methylmalonyl-CoA mutase CQJ30_18270 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CQJ30_18270 PF02770 Acyl-CoA dehydrogenase, middle domain CQJ30_18270 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CQJ30_18275 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CQJ30_18275 PF02770 Acyl-CoA dehydrogenase, middle domain CQJ30_18275 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CQJ30_18280 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain CQJ30_18280 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain CQJ30_18285 PF00108 Thiolase, N-terminal domain CQJ30_18285 PF02803 Thiolase, C-terminal domain CQJ30_18290 PF13183 4Fe-4S dicluster domain CQJ30_18290 PF02754 Cysteine-rich domain CQJ30_18295 PF13091 PLD-like domain CQJ30_18305 PF03485 Arginyl tRNA synthetase N terminal domain CQJ30_18305 PF00750 tRNA synthetases class I (R) CQJ30_18305 PF05746 DALR anticodon binding domain CQJ30_18315 PF00905 Penicillin binding protein transpeptidase domain CQJ30_18315 PF00912 Transglycosylase CQJ30_18320 PF08741 YwhD family CQJ30_18325 PF02163 Peptidase family M50 CQJ30_18330 PF01361 Tautomerase enzyme CQJ30_18340 PF01966 HD domain CQJ30_18360 PF07293 Protein of unknown function (DUF1450) CQJ30_18370 PF03099 Biotin/lipoate A/B protein ligase family CQJ30_18375 PF01515 Phosphate acetyl/butaryl transferase CQJ30_18385 PF07486 Cell Wall Hydrolase CQJ30_18390 PF09671 Spore coat protein (Spore_GerQ) CQJ30_18395 PF04241 Protein of unknown function (DUF423) CQJ30_18405 PF17284 Spermidine synthase tetramerisation domain CQJ30_18415 PF12323 Helix-turn-helix domain CQJ30_18415 PF07282 Putative transposase DNA-binding domain CQJ30_18415 PF01385 Probable transposase CQJ30_18435 PF00528 Binding-protein-dependent transport system inner membrane component CQJ30_18445 PF03636 Glycosyl hydrolase family 65, N-terminal domain CQJ30_18445 PF03632 Glycosyl hydrolase family 65 central catalytic domain CQJ30_18445 PF03633 Glycosyl hydrolase family 65, C-terminal domain CQJ30_18450 PF12833 Helix-turn-helix domain CQJ30_18450 PF02311 AraC-like ligand binding domain CQJ30_18455 PF08830 Protein of unknown function (DUF1806) CQJ30_18460 PF02585 GlcNAc-PI de-N-acetylase CQJ30_18470 PF02770 Acyl-CoA dehydrogenase, middle domain CQJ30_18470 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CQJ30_18470 PF18158 Adaptive response protein AidB N-terminal domain CQJ30_18475 PF13193 AMP-binding enzyme C-terminal domain CQJ30_18475 PF00501 AMP-binding enzyme CQJ30_18480 PF00376 MerR family regulatory protein CQJ30_18480 PF09278 MerR, DNA binding CQJ30_18485 PF16657 Maltogenic Amylase, C-terminal domain CQJ30_18485 PF00128 Alpha amylase, catalytic domain CQJ30_18490 PF00356 Bacterial regulatory proteins, lacI family CQJ30_18500 PF00528 Binding-protein-dependent transport system inner membrane component CQJ30_18505 PF00528 Binding-protein-dependent transport system inner membrane component CQJ30_18510 PF01557 Fumarylacetoacetate (FAA) hydrolase family CQJ30_18515 PF05343 M42 glutamyl aminopeptidase CQJ30_18540 PF04397 LytTr DNA-binding domain CQJ30_18540 PF00072 Response regulator receiver domain CQJ30_18545 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain CQJ30_18545 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain CQJ30_18585 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CQJ30_18590 PF00571 CBS domain CQJ30_18590 PF03471 Transporter associated domain CQJ30_18590 PF01595 Cyclin M transmembrane N-terminal domain CQJ30_18595 PF00582 Universal stress protein family CQJ30_18605 PF00535 Glycosyl transferase family 2 CQJ30_18610 PF00375 Sodium:dicarboxylate symporter family CQJ30_18615 PF01039 Carboxyl transferase domain CQJ30_18620 PF00378 Enoyl-CoA hydratase/isomerase CQJ30_18625 PF00682 HMGL-like CQJ30_18630 PF00364 Biotin-requiring enzyme CQJ30_18635 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain CQJ30_18635 PF02785 Biotin carboxylase C-terminal domain CQJ30_18635 PF00289 Biotin carboxylase, N-terminal domain CQJ30_18640 PF13193 AMP-binding enzyme C-terminal domain CQJ30_18640 PF00501 AMP-binding enzyme CQJ30_18645 PF02770 Acyl-CoA dehydrogenase, middle domain CQJ30_18645 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CQJ30_18645 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CQJ30_18650 PF00440 Bacterial regulatory proteins, tetR family CQJ30_18655 PF03466 LysR substrate binding domain CQJ30_18655 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CQJ30_18665 PF01501 Glycosyl transferase family 8 CQJ30_18665 PF08437 Glycosyl transferase family 8 C-terminal CQJ30_18670 PF01546 Peptidase family M20/M25/M40 CQJ30_18670 PF07687 Peptidase dimerisation domain CQJ30_18675 PF00474 Sodium:solute symporter family CQJ30_18680 PF04341 Protein of unknown function, DUF485 CQJ30_18685 PF00860 Permease family CQJ30_18695 PF02535 ZIP Zinc transporter CQJ30_18725 PF00005 ABC transporter CQJ30_18740 PF12323 Helix-turn-helix domain CQJ30_18740 PF07282 Putative transposase DNA-binding domain CQJ30_18740 PF01385 Probable transposase CQJ30_18750 PF00005 ABC transporter CQJ30_18750 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CQJ30_18755 PF00005 ABC transporter CQJ30_18755 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CQJ30_18760 PF12911 N-terminal TM domain of oligopeptide transport permease C CQJ30_18760 PF00528 Binding-protein-dependent transport system inner membrane component CQJ30_18765 PF00528 Binding-protein-dependent transport system inner membrane component CQJ30_18770 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CQJ30_18780 PF00199 Catalase CQJ30_18780 PF06628 Catalase-related immune-responsive CQJ30_18785 PF03435 Saccharopine dehydrogenase NADP binding domain CQJ30_18785 PF16653 Saccharopine dehydrogenase C-terminal domain CQJ30_18790 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain CQJ30_18795 PF00578 AhpC/TSA family CQJ30_18800 PF07992 Pyridine nucleotide-disulphide oxidoreductase CQJ30_18800 PF13192 Thioredoxin domain CQJ30_18805 PF17746 SfsA N-terminal OB domain CQJ30_18805 PF03749 Sugar fermentation stimulation protein RE domain CQJ30_18810 PF06039 Malate:quinone oxidoreductase (Mqo) CQJ30_18815 PF00581 Rhodanese-like domain CQJ30_18820 PF05598 Transposase domain (DUF772) CQJ30_18835 PF02386 Cation transport protein CQJ30_18850 PF07885 Ion channel CQJ30_18850 PF02254 TrkA-N domain CQJ30_18855 PF02590 Predicted SPOUT methyltransferase CQJ30_18860 PF11700 Vacuole effluxer Atg22 like CQJ30_18865 PF02475 Met-10+ like-protein CQJ30_18865 PF01938 TRAM domain CQJ30_18865 PF05958 tRNA (Uracil-5-)-methyltransferase CQJ30_18870 PF00072 Response regulator receiver domain CQJ30_18870 PF00486 Transcriptional regulatory protein, C terminal CQJ30_18875 PF00512 His Kinase A (phospho-acceptor) domain CQJ30_18875 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CQJ30_18890 PF00005 ABC transporter CQJ30_18900 PF13180 PDZ domain CQJ30_18905 PF00753 Metallo-beta-lactamase superfamily CQJ30_18910 PF09648 YycH protein CQJ30_18915 PF07435 YycH protein CQJ30_18920 PF13426 PAS domain CQJ30_18920 PF00672 HAMP domain CQJ30_18920 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CQJ30_18920 PF00512 His Kinase A (phospho-acceptor) domain CQJ30_18925 PF00486 Transcriptional regulatory protein, C terminal CQJ30_18925 PF00072 Response regulator receiver domain CQJ30_18930 PF01551 Peptidase family M23 CQJ30_18930 PF01476 LysM domain CQJ30_18935 PF00709 Adenylosuccinate synthetase CQJ30_18940 PF03796 DnaB-like helicase C terminal domain CQJ30_18940 PF00772 DnaB-like helicase N terminal domain CQJ30_18945 PF01281 Ribosomal protein L9, N-terminal domain CQJ30_18945 PF03948 Ribosomal protein L9, C-terminal domain CQJ30_18950 PF02272 DHHA1 domain CQJ30_18950 PF01368 DHH family CQJ30_18960 PF01084 Ribosomal protein S18 CQJ30_18965 PF00436 Single-strand binding protein family CQJ30_18970 PF01250 Ribosomal protein S6 CQJ30_18980 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) CQJ30_18980 PF02817 e3 binding domain CQJ30_18980 PF00364 Biotin-requiring enzyme CQJ30_18985 PF02779 Transketolase, pyrimidine binding domain CQJ30_18985 PF02780 Transketolase, C-terminal domain CQJ30_18990 PF00676 Dehydrogenase E1 component CQJ30_18995 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CQJ30_18995 PF07992 Pyridine nucleotide-disulphide oxidoreductase CQJ30_19000 PF02954 Bacterial regulatory protein, Fis family CQJ30_19000 PF00158 Sigma-54 interaction domain CQJ30_19000 PF01590 GAF domain CQJ30_19005 PF06071 Protein of unknown function (DUF933) CQJ30_19005 PF01926 50S ribosome-binding GTPase CQJ30_19010 PF06107 Bacterial protein of unknown function (DUF951) CQJ30_19015 PF06866 Protein of unknown function (DUF1256) CQJ30_19025 PF17762 HTH domain found in ParB protein CQJ30_19025 PF02195 ParB-like nuclease domain CQJ30_19030 PF13614 AAA domain CQJ30_19035 PF07282 Putative transposase DNA-binding domain CQJ30_19035 PF12323 Helix-turn-helix domain CQJ30_19035 PF01385 Probable transposase CQJ30_19045 PF17762 HTH domain found in ParB protein CQJ30_19045 PF02195 ParB-like nuclease domain CQJ30_19050 PF02527 rRNA small subunit methyltransferase G CQJ30_19055 PF13932 GidA associated domain CQJ30_19055 PF01134 Glucose inhibited division protein A CQJ30_19060 PF01926 50S ribosome-binding GTPase CQJ30_19060 PF12631 MnmE helical domain CQJ30_19060 PF10396 GTP-binding protein TrmE N-terminus CQJ30_19065 PF14804 Jag N-terminus CQJ30_19065 PF01424 R3H domain CQJ30_19070 PF02096 60Kd inner membrane protein CQJ30_19075 PF00825 Ribonuclease P CQJ30_19080 PF00468 Ribosomal protein L34