CQJ30_00005 PF00308 Bacterial dnaA protein CQJ30_00005 PF08299 Bacterial dnaA protein helix-turn-helix CQJ30_00005 PF11638 DnaA N-terminal domain CQJ30_00010 PF00712 DNA polymerase III beta subunit, N-terminal domain CQJ30_00010 PF02767 DNA polymerase III beta subunit, central domain CQJ30_00010 PF02768 DNA polymerase III beta subunit, C-terminal domain CQJ30_00015 PF13275 S4 domain CQJ30_00020 PF02463 RecF/RecN/SMC N terminal domain CQJ30_00025 PF00204 DNA gyrase B CQJ30_00025 PF00986 DNA gyrase B subunit, carboxyl terminus CQJ30_00025 PF01751 Toprim domain CQJ30_00025 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CQJ30_00030 PF00521 DNA gyrase/topoisomerase IV, subunit A CQJ30_00030 PF03989 DNA gyrase C-terminal domain, beta-propeller CQJ30_00045 PF13487 HD domain CQJ30_00075 PF14175 CQJ30_00075 CQJ30_00080 PF00478 IMP dehydrogenase / GMP reductase domain CQJ30_00080 PF00571 CBS domain CQJ30_00085 PF00768 D-alanyl-D-alanine carboxypeptidase CQJ30_00085 PF07943 Penicillin-binding protein 5, C-terminal domain CQJ30_00095 PF01385 CQJ30_00095 CQJ30_00095 PF07282 CQJ30_00095 CQJ30_00105 PF01712 Deoxynucleoside kinase CQJ30_00110 PF00704 Glycosyl hydrolases family 18 CQJ30_00110 PF01476 LysM domain CQJ30_00115 PF14437 CQJ30_00115 CQJ30_00125 PF12169 DNA polymerase III subunits gamma and tau domain III CQJ30_00125 PF13177 DNA polymerase III, delta subunit CQJ30_00130 PF02575 YbaB/EbfC DNA-binding family CQJ30_00135 PF02132 RecR protein CQJ30_00135 PF13662 Toprim domain CQJ30_00140 PF10704 CQJ30_00140 CQJ30_00145 PF07441 CQJ30_00145 CQJ30_00160 PF10764 CQJ30_00160 CQJ30_00165 PF02223 Thymidylate kinase CQJ30_00170 PF06153 Protein of unknown function (DUF970) CQJ30_00175 PF03885 Protein of unknown function (DUF327) CQJ30_00180 PF09115 DNA polymerase III, delta subunit, C terminal CQJ30_00180 PF13177 DNA polymerase III, delta subunit CQJ30_00185 PF04468 CQJ30_00185 CQJ30_00190 PF06156 CQJ30_00190 CQJ30_00195 PF05175 Methyltransferase small domain CQJ30_00200 PF01541 GIY-YIG catalytic domain CQJ30_00205 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CQJ30_00210 PF04014 Antidote-toxin recognition MazE CQJ30_00220 PF01588 Putative tRNA binding domain CQJ30_00220 PF09334 tRNA synthetases class I (M) CQJ30_00235 PF01026 TatD related DNase CQJ30_00240 PF03990 CQJ30_00240 CQJ30_00240 PF06725 3D domain CQJ30_00240 PF07501 G5 domain CQJ30_00245 PF13331 CQJ30_00245 CQJ30_00245 PF13662 Toprim domain CQJ30_00250 PF00398 Ribosomal RNA adenine dimethylase CQJ30_00255 PF05582 CQJ30_00255 CQJ30_00260 PF06257 Protein of unknown function (DUF1021) CQJ30_00265 PF00269 Small, acid-soluble spore proteins, alpha/beta type CQJ30_00270 PF00288 GHMP kinases N terminal domain CQJ30_00270 PF08544 GHMP kinases C terminal CQJ30_00275 PF00156 Phosphoribosyl transferase domain CQJ30_00275 PF09182 Bacterial purine repressor, N-terminal CQJ30_00280 PF04026 SpoVG CQJ30_00285 PF00132 Bacterial transferase hexapeptide (six repeats) CQJ30_00285 PF00483 Nucleotidyl transferase CQJ30_00290 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase CQJ30_00290 PF14572 Phosphoribosyl synthetase-associated domain CQJ30_00295 PF01386 Ribosomal L25p family CQJ30_00295 PF14693 Ribosomal protein TL5, C-terminal domain CQJ30_00300 PF01195 Peptidyl-tRNA hydrolase CQJ30_00305 PF10955 CQJ30_00305 CQJ30_00310 PF00270 DEAD/DEAH box helicase CQJ30_00310 PF00271 Helicase conserved C-terminal domain CQJ30_00310 PF02559 CarD-like/TRCF domain CQJ30_00310 PF03461 TRCF domain CQJ30_00315 PF04014 Antidote-toxin recognition MazE CQJ30_00315 PF15714 CQJ30_00315 CQJ30_00320 PF01943 CQJ30_00320 CQJ30_00320 PF14667 Polysaccharide biosynthesis C-terminal domain CQJ30_00325 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CQJ30_00325 PF03819 MazG nucleotide pyrophosphohydrolase domain CQJ30_00330 PF01479 S4 domain CQJ30_00335 PF07873 YabP family CQJ30_00340 PF09578 CQJ30_00340 CQJ30_00345 PF04977 Septum formation initiator CQJ30_00350 PF00575 S1 RNA binding domain CQJ30_00360 PF01609 Transposase DDE domain CQJ30_00365 PF07228 Stage II sporulation protein E (SpoIIE) CQJ30_00370 PF00092 von Willebrand factor type A domain CQJ30_00370 PF13519 von Willebrand factor type A domain CQJ30_00375 PF00069 Protein kinase domain CQJ30_00380 PF01171 PP-loop family CQJ30_00380 PF09179 TilS substrate binding domain CQJ30_00380 PF11734 TilS substrate C-terminal domain CQJ30_00385 PF00156 Phosphoribosyl transferase domain CQJ30_00390 PF00004 ATPase family associated with various cellular activities (AAA) CQJ30_00390 PF01434 Peptidase family M41 CQJ30_00390 PF06480 FtsH Extracellular CQJ30_00395 PF03309 Type III pantothenate kinase CQJ30_00400 PF01430 Hsp33 protein CQJ30_00405 PF00291 Pyridoxal-phosphate dependent enzyme CQJ30_00410 PF00809 Pterin binding enzyme CQJ30_00415 PF02152 Dihydroneopterin aldolase CQJ30_00420 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) CQJ30_00425 PF01381 Helix-turn-helix CQJ30_00430 PF00152 tRNA synthetases class II (D, K and N) CQJ30_00430 PF01336 OB-fold nucleic acid binding domain CQJ30_00435 PF00356 Bacterial regulatory proteins, lacI family CQJ30_00435 PF13377 Periplasmic binding protein-like domain CQJ30_00440 PF00128 Alpha amylase, catalytic domain CQJ30_00440 PF02903 Alpha amylase, N-terminal ig-like domain CQJ30_00440 PF16657 CQJ30_00440 CQJ30_00445 PF13416 Bacterial extracellular solute-binding protein CQJ30_00450 PF00528 Binding-protein-dependent transport system inner membrane component CQJ30_00455 PF00528 Binding-protein-dependent transport system inner membrane component CQJ30_00460 PF06691 CQJ30_00460 CQJ30_00465 PF03632 Glycosyl hydrolase family 65 central catalytic domain CQJ30_00465 PF03633 Glycosyl hydrolase family 65, C-terminal domain CQJ30_00465 PF03636 Glycosyl hydrolase family 65, N-terminal domain CQJ30_00470 PF00128 Alpha amylase, catalytic domain CQJ30_00545 PF05848 Firmicute transcriptional repressor of class III stress genes (CtsR) CQJ30_00550 PF02151 UvrB/uvrC motif CQJ30_00555 PF00217 ATP:guanido phosphotransferase, C-terminal catalytic domain CQJ30_00560 PF00004 ATPase family associated with various cellular activities (AAA) CQJ30_00560 PF02151 UvrB/uvrC motif CQJ30_00560 PF02861 Clp amino terminal domain CQJ30_00560 PF07724 AAA domain (Cdc48 subfamily) CQJ30_00560 PF10431 C-terminal, D2-small domain, of ClpB protein CQJ30_00565 PF13481 AAA domain CQJ30_00565 PF13541 Subunit ChlI of Mg-chelatase CQJ30_00575 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase CQJ30_00580 PF02542 YgbB family CQJ30_00585 PF00749 tRNA synthetases class I (E and Q), catalytic domain CQJ30_00590 PF00132 Bacterial transferase hexapeptide (six repeats) CQJ30_00590 PF06426 Serine acetyltransferase, N-terminal CQJ30_00595 PF01406 tRNA synthetases class I (C) catalytic domain CQJ30_00595 PF09190 DALR domain CQJ30_00600 PF00636 Ribonuclease III domain CQJ30_00605 PF00588 SpoU rRNA Methylase family CQJ30_00605 PF08032 RNA 2'-O ribose methyltransferase substrate binding CQJ30_00610 PF05991 CQJ30_00610 CQJ30_00615 PF04542 Sigma-70 region 2 CQJ30_00615 PF08281 Sigma-70, region 4 CQJ30_00620 PF00471 Ribosomal protein L33 CQJ30_00625 PF00584 SecE/Sec61-gamma subunits of protein translocation complex CQJ30_00630 PF00467 KOW motif CQJ30_00630 PF02357 Transcription termination factor nusG CQJ30_00635 PF00298 Ribosomal protein L11, RNA binding domain CQJ30_00635 PF03946 Ribosomal protein L11, N-terminal domain CQJ30_00640 PF00687 Ribosomal protein L1p/L10e family CQJ30_00645 PF00466 Ribosomal protein L10 CQJ30_00650 PF00542 Ribosomal protein L7/L12 C-terminal domain CQJ30_00650 PF16320 CQJ30_00650 CQJ30_00655 PF05175 Methyltransferase small domain CQJ30_00660 PF00562 RNA polymerase Rpb2, domain 6 CQJ30_00660 PF04560 RNA polymerase Rpb2, domain 7 CQJ30_00660 PF04561 RNA polymerase Rpb2, domain 2 CQJ30_00660 PF04563 RNA polymerase beta subunit CQJ30_00660 PF04565 RNA polymerase Rpb2, domain 3 CQJ30_00660 PF10385 RNA polymerase beta subunit external 1 domain CQJ30_00665 PF00623 RNA polymerase Rpb1, domain 2 CQJ30_00665 PF04983 RNA polymerase Rpb1, domain 3 CQJ30_00665 PF04997 RNA polymerase Rpb1, domain 1 CQJ30_00665 PF04998 RNA polymerase Rpb1, domain 5 CQJ30_00665 PF05000 RNA polymerase Rpb1, domain 4 CQJ30_00670 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family CQJ30_00675 PF00164 Ribosomal protein S12/S23 CQJ30_00680 PF00177 Ribosomal protein S7p/S5e CQJ30_00685 PF00009 Elongation factor Tu GTP binding domain CQJ30_00685 PF00679 Elongation factor G C-terminus CQJ30_00685 PF03144 Elongation factor Tu domain 2 CQJ30_00685 PF03764 Elongation factor G, domain IV CQJ30_00685 PF14492 Elongation Factor G, domain II CQJ30_00690 PF00009 Elongation factor Tu GTP binding domain CQJ30_00690 PF03143 Elongation factor Tu C-terminal domain CQJ30_00690 PF03144 Elongation factor Tu domain 2 CQJ30_00695 PF00338 Ribosomal protein S10p/S20e CQJ30_00700 PF00297 Ribosomal protein L3 CQJ30_00705 PF00573 Ribosomal protein L4/L1 family CQJ30_00710 PF00276 Ribosomal protein L23 CQJ30_00715 PF00181 Ribosomal Proteins L2, RNA binding domain CQJ30_00715 PF03947 Ribosomal Proteins L2, C-terminal domain CQJ30_00720 PF00203 Ribosomal protein S19 CQJ30_00725 PF00237 Ribosomal protein L22p/L17e CQJ30_00730 PF00189 Ribosomal protein S3, C-terminal domain CQJ30_00730 PF07650 KH domain CQJ30_00735 PF00252 Ribosomal protein L16p/L10e CQJ30_00740 PF00831 Ribosomal L29 protein CQJ30_00745 PF00366 Ribosomal protein S17 CQJ30_00750 PF00238 Ribosomal protein L14p/L23e CQJ30_00755 PF00467 KOW motif CQJ30_00755 PF17136 CQJ30_00755 CQJ30_00760 PF00281 Ribosomal protein L5 CQJ30_00760 PF00673 ribosomal L5P family C-terminus CQJ30_00765 PF00253 Ribosomal protein S14p/S29e CQJ30_00770 PF00410 Ribosomal protein S8 CQJ30_00775 PF00347 Ribosomal protein L6 CQJ30_00780 PF00861 Ribosomal L18p/L5e family CQJ30_00785 PF00333 Ribosomal protein S5, N-terminal domain CQJ30_00785 PF03719 Ribosomal protein S5, C-terminal domain CQJ30_00790 PF00327 Ribosomal protein L30p/L7e CQJ30_00795 PF00828 Ribosomal protein L18e/L15 CQJ30_00800 PF00344 SecY translocase CQJ30_00805 PF00406 Adenylate kinase CQJ30_00805 PF05191 Adenylate kinase, active site lid CQJ30_00815 PF01176 Translation initiation factor 1A / IF-1 CQJ30_00820 PF00444 Ribosomal protein L36 CQJ30_00825 PF00416 Ribosomal protein S13/S18 CQJ30_00830 PF00411 Ribosomal protein S11 CQJ30_00835 PF01000 RNA polymerase Rpb3/RpoA insert domain CQJ30_00835 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain CQJ30_00835 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain CQJ30_00840 PF01196 Ribosomal protein L17 CQJ30_00850 PF00005 ABC transporter CQJ30_00855 PF00005 ABC transporter CQJ30_00860 PF02361 Cobalt transport protein CQJ30_00865 PF01416 tRNA pseudouridine synthase CQJ30_00870 PF00572 Ribosomal protein L13 CQJ30_00875 PF00380 Ribosomal protein S9/S16 CQJ30_00880 PF00589 Phage integrase family CQJ30_00890 PF00561 alpha/beta hydrolase fold CQJ30_00895 PF07486 Cell Wall Hydrolase CQJ30_00905 PF13091 PLD-like domain CQJ30_00910 PF01476 LysM domain CQJ30_00910 PF01568 Molydopterin dinucleotide binding domain CQJ30_00915 PF00384 Molybdopterin oxidoreductase CQJ30_00915 PF04879 Molybdopterin oxidoreductase Fe4S4 domain CQJ30_00925 PF07870 CQJ30_00925 CQJ30_00935 PF03862 CQJ30_00935 CQJ30_00955 PF07875 CQJ30_00955 CQJ30_00965 PF07870 CQJ30_00965 CQJ30_00970 PF09580 CQJ30_00970 CQJ30_00975 PF03862 CQJ30_00975 CQJ30_00980 PF07451 Stage V sporulation protein AD (SpoVAD) CQJ30_00985 PF03862 CQJ30_00985 CQJ30_00990 PF07870 CQJ30_00990 CQJ30_00995 PF04239 Protein of unknown function (DUF421) CQJ30_00995 PF07870 CQJ30_00995 CQJ30_01000 PF07870 CQJ30_01000 CQJ30_01005 PF02588 CQJ30_01005 CQJ30_01010 PF01610 CQJ30_01010 CQJ30_01010 PF13542 CQJ30_01010 CQJ30_01010 PF14690 CQJ30_01010 CQJ30_01015 PF02588 CQJ30_01015 CQJ30_01030 PF00011 Hsp20/alpha crystallin family CQJ30_01040 PF07870 CQJ30_01040 CQJ30_01060 PF14076 CQJ30_01060 CQJ30_01075 PF03960 ArsC family CQJ30_01085 PF07728 AAA domain (dynein-related subfamily) CQJ30_01090 PF04986 CQJ30_01090 CQJ30_01090 PF14319 CQJ30_01090 CQJ30_01100 PF03022 Major royal jelly protein CQJ30_01110 PF07875 CQJ30_01110 CQJ30_01115 PF00107 Zinc-binding dehydrogenase CQJ30_01115 PF08240 Alcohol dehydrogenase GroES-like domain CQJ30_01115 PF13823 Alcohol dehydrogenase GroES-associated CQJ30_01125 PF07875 CQJ30_01125 CQJ30_01130 PF01323 DSBA-like thioredoxin domain CQJ30_01135 PF00892 EamA-like transporter family CQJ30_01145 PF13519 von Willebrand factor type A domain CQJ30_01165 PF00380 Ribosomal protein S9/S16 CQJ30_01170 PF01566 CQJ30_01170 CQJ30_01175 PF16107 CQJ30_01175 CQJ30_01180 PF02378 Phosphotransferase system, EIIC CQJ30_01185 PF00392 Bacterial regulatory proteins, gntR family CQJ30_01185 PF07702 UTRA domain CQJ30_01190 PF01797 Transposase IS200 like CQJ30_01200 PF01609 Transposase DDE domain CQJ30_01200 PF14104 CQJ30_01200 CQJ30_01205 PF13419 Haloacid dehalogenase-like hydrolase CQJ30_01210 PF01380 SIS domain CQJ30_01210 PF01418 Helix-turn-helix domain, rpiR family CQJ30_01215 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CQJ30_01220 PF00528 Binding-protein-dependent transport system inner membrane component CQJ30_01225 PF00528 Binding-protein-dependent transport system inner membrane component CQJ30_01230 PF00005 ABC transporter CQJ30_01230 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CQJ30_01235 PF00005 ABC transporter CQJ30_01240 PF00753 Metallo-beta-lactamase superfamily CQJ30_01245 PF05598 CQJ30_01245 CQJ30_01255 PF13401 AAA domain CQJ30_01260 PF09299 Mu transposase, C-terminal CQJ30_01270 PF00589 Phage integrase family CQJ30_01275 PF00589 Phage integrase family CQJ30_01275 PF02899 Phage integrase, N-terminal SAM-like domain CQJ30_01280 PF00665 Integrase core domain CQJ30_01280 PF13565 CQJ30_01280 CQJ30_01295 PF07702 UTRA domain CQJ30_01300 PF10730 CQJ30_01300 CQJ30_01305 PF01520 N-acetylmuramoyl-L-alanine amidase CQJ30_01310 PF10609 ParA/MinD ATPase like CQJ30_01320 PF01609 Transposase DDE domain CQJ30_01330 PF14089 CQJ30_01330 CQJ30_01335 PF01522 Polysaccharide deacetylase CQJ30_01405 PF00491 Arginase family CQJ30_01410 PF04542 Sigma-70 region 2 CQJ30_01410 PF08281 Sigma-70, region 4 CQJ30_01415 PF13490 Putative zinc-finger CQJ30_01420 PF02457 DisA bacterial checkpoint controller nucleotide-binding CQJ30_01425 PF07949 YbbR-like protein CQJ30_01430 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain CQJ30_01430 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I CQJ30_01430 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II CQJ30_01430 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III CQJ30_01440 PF01380 SIS domain CQJ30_01440 PF13522 Glutamine amidotransferase domain CQJ30_01445 PF01546 Peptidase family M20/M25/M40 CQJ30_01445 PF07687 Peptidase dimerisation domain CQJ30_01460 PF01546 Peptidase family M20/M25/M40 CQJ30_01465 PF03806 CQJ30_01465 CQJ30_01470 PF01546 Peptidase family M20/M25/M40 CQJ30_01470 PF07687 Peptidase dimerisation domain CQJ30_01475 PF01381 Helix-turn-helix CQJ30_01485 PF00398 Ribosomal RNA adenine dimethylase CQJ30_01490 PF13561 Enoyl-(Acyl carrier protein) reductase CQJ30_01495 PF06689 ClpX C4-type zinc finger CQJ30_01505 PF01381 Helix-turn-helix CQJ30_01515 PF08282 haloacid dehalogenase-like hydrolase CQJ30_01520 PF07995 Glucose / Sorbosone dehydrogenase CQJ30_01525 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CQJ30_01530 PF00072 Response regulator receiver domain CQJ30_01530 PF00486 Transcriptional regulatory protein, C terminal CQJ30_01535 PF00005 ABC transporter CQJ30_01540 PF02687 CQJ30_01540 CQJ30_01550 PF00440 Bacterial regulatory proteins, tetR family CQJ30_01555 PF12698 ABC-2 family transporter protein CQJ30_01560 PF00005 ABC transporter CQJ30_01565 PF01613 Flavin reductase like domain CQJ30_01570 PF01037 AsnC family CQJ30_01570 PF13404 AsnC-type helix-turn-helix domain CQJ30_01585 PF13649 Methyltransferase domain CQJ30_01600 PF13673 Acetyltransferase (GNAT) domain CQJ30_01615 PF07690 Major Facilitator Superfamily CQJ30_01620 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CQJ30_01620 PF03466 LysR substrate binding domain CQJ30_01625 PF08020 Protein of unknown function (DUF1706) CQJ30_01645 PF01381 Helix-turn-helix CQJ30_01650 PF01327 Polypeptide deformylase CQJ30_01655 PF07690 Major Facilitator Superfamily CQJ30_01675 PF03551 Transcriptional regulator PadR-like family CQJ30_01690 PF00480 ROK family CQJ30_01695 PF07690 Major Facilitator Superfamily CQJ30_01700 PF08282 haloacid dehalogenase-like hydrolase CQJ30_01720 PF13346 CQJ30_01720 CQJ30_01725 PF00005 ABC transporter CQJ30_01730 PF00392 Bacterial regulatory proteins, gntR family CQJ30_01740 PF00440 Bacterial regulatory proteins, tetR family CQJ30_01740 PF13977 Bacterial transcriptional repressor CQJ30_01750 PF07486 Cell Wall Hydrolase CQJ30_01755 PF11188 CQJ30_01755 CQJ30_01760 PF13443 Cro/C1-type HTH DNA-binding domain CQJ30_01770 PF00860 Permease family CQJ30_01775 PF13597 Anaerobic ribonucleoside-triphosphate reductase CQJ30_01780 PF04055 Radical SAM superfamily CQJ30_01780 PF13353 4Fe-4S single cluster domain CQJ30_01785 PF01797 Transposase IS200 like CQJ30_01790 PF12323 CQJ30_01790 CQJ30_01795 PF13701 CQJ30_01795 CQJ30_01800 PF01385 CQJ30_01800 CQJ30_01800 PF07282 CQJ30_01800 CQJ30_01800 PF12323 CQJ30_01800 CQJ30_01820 PF11611 Domain of unknown function (DUF4352) CQJ30_01830 PF00005 ABC transporter CQJ30_01835 PF00528 Binding-protein-dependent transport system inner membrane component CQJ30_01835 PF04069 Substrate binding domain of ABC-type glycine betaine transport system CQJ30_01855 PF00872 CQJ30_01855 CQJ30_01870 PF00324 Amino acid permease CQJ30_01875 PF03747 ADP-ribosylglycohydrolase CQJ30_01880 PF13561 Enoyl-(Acyl carrier protein) reductase CQJ30_01885 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CQJ30_01885 PF02770 Acyl-CoA dehydrogenase, middle domain CQJ30_01885 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CQJ30_01890 PF02036 SCP-2 sterol transfer family CQJ30_01895 PF12784 CQJ30_01895 CQJ30_01900 PF02660 CQJ30_01900 CQJ30_01905 PF00535 Glycosyl transferase family 2 CQJ30_01910 PF03358 NADPH-dependent FMN reductase CQJ30_01915 PF00370 FGGY family of carbohydrate kinases, N-terminal domain CQJ30_01915 PF02782 FGGY family of carbohydrate kinases, C-terminal domain CQJ30_01920 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain CQJ30_01920 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase CQJ30_01925 PF01380 SIS domain CQJ30_01925 PF01418 Helix-turn-helix domain, rpiR family CQJ30_01930 PF02447 CQJ30_01930 CQJ30_01940 PF00890 FAD binding domain CQJ30_01945 PF00266 Aminotransferase class-V CQJ30_01950 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain CQJ30_01955 PF01544 CorA-like Mg2+ transporter protein CQJ30_01970 PF00872 CQJ30_01970 CQJ30_01975 PF01370 NAD dependent epimerase/dehydratase family CQJ30_01980 PF00440 Bacterial regulatory proteins, tetR family CQJ30_01985 PF00999 Sodium/hydrogen exchanger family CQJ30_01990 PF01385 CQJ30_01990 CQJ30_01990 PF07282 CQJ30_01990 CQJ30_01990 PF12323 CQJ30_01990 CQJ30_01995 PF00239 Resolvase, N terminal domain CQJ30_01995 PF13411 MerR HTH family regulatory protein CQJ30_02000 PF00268 Ribonucleotide reductase, small chain CQJ30_02005 PF00258 Flavodoxin CQJ30_02010 PF00317 Ribonucleotide reductase, all-alpha domain CQJ30_02010 PF02867 Ribonucleotide reductase, barrel domain CQJ30_02020 PF00950 CQJ30_02020 CQJ30_02035 PF00581 Rhodanese-like domain CQJ30_02035 PF01206 Sulfurtransferase TusA CQJ30_02040 PF13686 DsrE/DsrF/DrsH-like family CQJ30_02045 PF00581 Rhodanese-like domain CQJ30_02045 PF00753 Metallo-beta-lactamase superfamily CQJ30_02050 PF01206 Sulfurtransferase TusA CQJ30_02055 PF01925 CQJ30_02055 CQJ30_02060 PF02583 Metal-sensitive transcriptional repressor CQJ30_02065 PF00581 Rhodanese-like domain CQJ30_02070 PF00581 Rhodanese-like domain CQJ30_02075 PF00462 Glutaredoxin CQJ30_02080 PF01609 Transposase DDE domain CQJ30_02080 PF14104 CQJ30_02080 CQJ30_02090 PF00176 SNF2 family N-terminal domain CQJ30_02090 PF00271 Helicase conserved C-terminal domain CQJ30_02110 PF02384 N-6 DNA Methylase CQJ30_02115 PF13546 CQJ30_02115 CQJ30_02125 PF14534 Domain of unknown function (DUF4440) CQJ30_02130 PF00149 Calcineurin-like phosphoesterase CQJ30_02130 PF02872 5'-nucleotidase, C-terminal domain CQJ30_02135 PF12974 ABC transporter, phosphonate, periplasmic substrate-binding protein CQJ30_02140 PF00005 ABC transporter CQJ30_02145 PF00528 Binding-protein-dependent transport system inner membrane component CQJ30_02150 PF00528 Binding-protein-dependent transport system inner membrane component CQJ30_02160 PF12841 CQJ30_02160 CQJ30_02165 PF11148 CQJ30_02165 CQJ30_02170 PF07872 CQJ30_02170 CQJ30_02175 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain CQJ30_02175 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain CQJ30_02180 PF07853 CQJ30_02180 CQJ30_02185 PF02581 Thiamine monophosphate synthase/TENI CQJ30_02190 PF02110 Hydroxyethylthiazole kinase family CQJ30_02195 PF08543 Phosphomethylpyrimidine kinase CQJ30_02200 PF09512 CQJ30_02200 CQJ30_02205 PF03070 TENA/THI-4/PQQC family CQJ30_02210 PF00210 Ferritin-like domain CQJ30_02215 PF00027 Cyclic nucleotide-binding domain CQJ30_02215 PF13545 Crp-like helix-turn-helix domain CQJ30_02220 PF00122 E1-E2 ATPase CQJ30_02220 PF00702 haloacid dehalogenase-like hydrolase CQJ30_02225 PF00403 Heavy-metal-associated domain CQJ30_02235 PF01967 MoaC family CQJ30_02240 PF00528 Binding-protein-dependent transport system inner membrane component CQJ30_02245 PF13531 Bacterial extracellular solute-binding protein CQJ30_02250 PF00994 Probable molybdopterin binding domain CQJ30_02255 PF12804 MobA-like NTP transferase domain CQJ30_02260 PF00027 Cyclic nucleotide-binding domain CQJ30_02260 PF13545 Crp-like helix-turn-helix domain CQJ30_02265 PF03205 Molybdopterin guanine dinucleotide synthesis protein B CQJ30_02270 PF02597 ThiS family CQJ30_02275 PF02391 MoaE protein CQJ30_02280 PF00994 Probable molybdopterin binding domain CQJ30_02280 PF03453 MoeA N-terminal region (domain I and II) CQJ30_02280 PF03454 MoeA C-terminal region (domain IV) CQJ30_02285 PF00899 ThiF family CQJ30_02290 PF04055 Radical SAM superfamily CQJ30_02290 PF06463 Molybdenum Cofactor Synthesis C CQJ30_02290 PF13353 4Fe-4S single cluster domain CQJ30_02295 PF07690 Major Facilitator Superfamily CQJ30_02300 PF13546 CQJ30_02300 CQJ30_02305 PF01418 Helix-turn-helix domain, rpiR family CQJ30_02310 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain CQJ30_02310 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase CQJ30_02315 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CQJ30_02315 PF00874 PRD domain CQJ30_02315 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CQJ30_02315 PF05043 Mga helix-turn-helix domain CQJ30_02315 PF08279 HTH domain CQJ30_02320 PF00370 FGGY family of carbohydrate kinases, N-terminal domain CQJ30_02320 PF02782 FGGY family of carbohydrate kinases, C-terminal domain CQJ30_02325 PF02378 Phosphotransferase system, EIIC CQJ30_02330 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CQJ30_02335 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit CQJ30_02340 PF00232 Glycosyl hydrolase family 1 CQJ30_02350 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) CQJ30_02350 PF08388 CQJ30_02350 CQJ30_02360 PF05076 Suppressor of fused protein (SUFU) CQJ30_02370 PF13546 CQJ30_02370 CQJ30_02375 PF07690 Major Facilitator Superfamily CQJ30_02380 PF07261 Replication initiation and membrane attachment CQJ30_02385 PF13181 Tetratricopeptide repeat CQJ30_02385 PF13424 Tetratricopeptide repeat CQJ30_02390 PF02665 Nitrate reductase gamma subunit CQJ30_02395 PF02613 Nitrate reductase delta subunit CQJ30_02400 PF13247 4Fe-4S dicluster domain CQJ30_02400 PF14711 Respiratory nitrate reductase beta C-terminal CQJ30_02405 PF00384 Molybdopterin oxidoreductase CQJ30_02405 PF01568 Molydopterin dinucleotide binding domain CQJ30_02405 PF14710 Respiratory nitrate reductase alpha N-terminal CQJ30_02410 PF07690 Major Facilitator Superfamily CQJ30_02415 PF07690 Major Facilitator Superfamily CQJ30_02420 PF03649 CQJ30_02420 CQJ30_02425 PF00005 ABC transporter CQJ30_02435 PF01274 Malate synthase CQJ30_02440 PF00463 Isocitrate lyase family CQJ30_02445 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CQJ30_02450 PF01266 FAD dependent oxidoreductase CQJ30_02455 PF04073 Aminoacyl-tRNA editing domain CQJ30_02460 PF01131 DNA topoisomerase CQJ30_02460 PF01396 CQJ30_02460 CQJ30_02460 PF01751 Toprim domain CQJ30_02465 PF01047 MarR family CQJ30_02480 PF01970 CQJ30_02480 CQJ30_02485 PF00288 GHMP kinases N terminal domain CQJ30_02485 PF08544 GHMP kinases C terminal CQJ30_02490 PF00288 GHMP kinases N terminal domain CQJ30_02490 PF08544 GHMP kinases C terminal CQJ30_02495 PF00288 GHMP kinases N terminal domain CQJ30_02495 PF08544 GHMP kinases C terminal CQJ30_02500 PF01070 FMN-dependent dehydrogenase CQJ30_02505 PF07875 CQJ30_02505 CQJ30_02520 PF07875 CQJ30_02520 CQJ30_02530 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family CQJ30_02540 PF00188 Cysteine-rich secretory protein family CQJ30_02540 PF01476 LysM domain CQJ30_02550 PF00581 Rhodanese-like domain CQJ30_02550 PF12368 CQJ30_02550 CQJ30_02555 PF04172 CQJ30_02555 CQJ30_02560 PF03788 CQJ30_02560 CQJ30_02565 PF03626 CQJ30_02565 CQJ30_02570 PF00510 Cytochrome c oxidase subunit III CQJ30_02575 PF00115 Cytochrome C and Quinol oxidase polypeptide I CQJ30_02580 PF02790 Cytochrome C oxidase subunit II, transmembrane domain CQJ30_02585 PF14139 CQJ30_02585 CQJ30_02590 PF09335 CQJ30_02590 CQJ30_02595 PF02673 CQJ30_02595 CQJ30_02600 PF00072 Response regulator receiver domain CQJ30_02600 PF00486 Transcriptional regulatory protein, C terminal CQJ30_02605 PF00512 His Kinase A (phospho-acceptor) domain CQJ30_02605 PF00672 HAMP domain CQJ30_02605 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CQJ30_02610 PF01323 DSBA-like thioredoxin domain CQJ30_02615 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CQJ30_02615 PF00672 HAMP domain CQJ30_02620 PF00872 CQJ30_02620 CQJ30_02625 PF01381 Helix-turn-helix CQJ30_02625 PF07883 Cupin domain CQJ30_02630 PF00005 ABC transporter CQJ30_02630 PF08402 TOBE domain CQJ30_02635 PF00528 Binding-protein-dependent transport system inner membrane component CQJ30_02640 PF00528 Binding-protein-dependent transport system inner membrane component CQJ30_02645 PF13416 Bacterial extracellular solute-binding protein CQJ30_02655 PF06207 CQJ30_02655 CQJ30_02670 PF01384 CQJ30_02670 CQJ30_02675 PF01865 Protein of unknown function DUF47 CQJ30_02680 PF00768 D-alanyl-D-alanine carboxypeptidase CQJ30_02685 PF13245 Part of AAA domain CQJ30_02685 PF13361 UvrD-like helicase C-terminal domain CQJ30_02690 PF01118 Semialdehyde dehydrogenase, NAD binding domain CQJ30_02690 PF02774 Semialdehyde dehydrogenase, dimerisation domain CQJ30_02695 PF01960 ArgJ family CQJ30_02700 PF00696 Amino acid kinase family CQJ30_02705 PF00202 Aminotransferase class-III CQJ30_02710 PF00117 Glutamine amidotransferase class-I CQJ30_02710 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain CQJ30_02715 PF02142 MGS-like domain CQJ30_02715 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain CQJ30_02715 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain CQJ30_02720 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain CQJ30_02720 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain CQJ30_02725 PF00764 Arginosuccinate synthase CQJ30_02730 PF00206 Lyase CQJ30_02730 PF14698 Argininosuccinate lyase C-terminal CQJ30_02735 PF10925 CQJ30_02735 CQJ30_02740 PF06196 CQJ30_02740 CQJ30_02745 PF00474 Sodium:solute symporter family CQJ30_02750 PF01565 FAD binding domain CQJ30_02750 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain CQJ30_02755 PF11611 Domain of unknown function (DUF4352) CQJ30_02765 PF02384 N-6 DNA Methylase CQJ30_02765 PF12161 HsdM N-terminal domain CQJ30_02775 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) CQJ30_02775 PF04851 Type III restriction enzyme, res subunit CQJ30_02775 PF11867 CQJ30_02775 CQJ30_02785 PF00370 FGGY family of carbohydrate kinases, N-terminal domain CQJ30_02785 PF02782 FGGY family of carbohydrate kinases, C-terminal domain CQJ30_02790 PF00596 Class II Aldolase and Adducin N-terminal domain CQJ30_02795 PF02610 L-arabinose isomerase CQJ30_02795 PF11762 L-arabinose isomerase C-terminal domain CQJ30_02800 PF03894 D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase CQJ30_02800 PF09363 XFP C-terminal domain CQJ30_02800 PF09364 XFP N-terminal domain CQJ30_02805 PF01594 CQJ30_02805 CQJ30_02810 PF00392 Bacterial regulatory proteins, gntR family CQJ30_02810 PF13377 Periplasmic binding protein-like domain CQJ30_02815 PF13685 Iron-containing alcohol dehydrogenase CQJ30_02825 PF13407 Periplasmic binding protein domain CQJ30_02830 PF00005 ABC transporter CQJ30_02835 PF02653 CQJ30_02835 CQJ30_02840 PF00480 ROK family CQJ30_02840 PF13412 Winged helix-turn-helix DNA-binding CQJ30_02855 PF00370 FGGY family of carbohydrate kinases, N-terminal domain CQJ30_02855 PF02782 FGGY family of carbohydrate kinases, C-terminal domain CQJ30_02860 PF04616 Glycosyl hydrolases family 43 CQJ30_02865 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CQJ30_02865 PF06580 CQJ30_02865 CQJ30_02870 PF00072 Response regulator receiver domain CQJ30_02870 PF12833 Helix-turn-helix domain CQJ30_02875 PF13416 Bacterial extracellular solute-binding protein CQJ30_02880 PF00528 Binding-protein-dependent transport system inner membrane component CQJ30_02885 PF00528 Binding-protein-dependent transport system inner membrane component CQJ30_02890 PF01522 Polysaccharide deacetylase CQJ30_02895 PF13472 GDSL-like Lipase/Acylhydrolase family CQJ30_02900 PF04854 CQJ30_02900 CQJ30_02905 PF01408 Oxidoreductase family, NAD-binding Rossmann fold CQJ30_02910 PF00248 Aldo/keto reductase family CQJ30_02915 PF00440 Bacterial regulatory proteins, tetR family CQJ30_02920 PF13520 Amino acid permease CQJ30_02925 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase CQJ30_02925 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain CQJ30_02930 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) CQJ30_02930 PF00364 Biotin-requiring enzyme CQJ30_02930 PF02817 e3 binding domain CQJ30_02935 PF00676 Dehydrogenase E1 component CQJ30_02940 PF02779 Transketolase, pyrimidine binding domain CQJ30_02940 PF02780 Transketolase, C-terminal domain CQJ30_02945 PF13561 Enoyl-(Acyl carrier protein) reductase CQJ30_02950 PF14690 CQJ30_02950 CQJ30_02955 PF13416 Bacterial extracellular solute-binding protein CQJ30_02960 PF00528 Binding-protein-dependent transport system inner membrane component CQJ30_02965 PF00528 Binding-protein-dependent transport system inner membrane component CQJ30_02970 PF00703 Glycosyl hydrolases family 2 CQJ30_02970 PF02836 Glycosyl hydrolases family 2, TIM barrel domain CQJ30_02970 PF02837 Glycosyl hydrolases family 2, sugar binding domain CQJ30_02970 PF02929 Beta galactosidase small chain CQJ30_02970 PF16353 CQJ30_02970 CQJ30_02975 PF02065 Melibiase CQJ30_02975 PF16874 CQJ30_02975 CQJ30_02975 PF16875 CQJ30_02975 CQJ30_02980 PF04754 CQJ30_02980 CQJ30_02990 PF01385 CQJ30_02990 CQJ30_02990 PF07282 CQJ30_02990 CQJ30_02995 PF11535 Calcium binding CQJ30_03000 PF04343 CQJ30_03000 CQJ30_03005 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain CQJ30_03005 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I CQJ30_03005 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II CQJ30_03005 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III CQJ30_03010 PF00288 GHMP kinases N terminal domain CQJ30_03010 PF08544 GHMP kinases C terminal CQJ30_03010 PF10509 Galactokinase galactose-binding signature CQJ30_03015 PF01370 NAD dependent epimerase/dehydratase family CQJ30_03020 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain CQJ30_03020 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain CQJ30_03025 PF01263 Aldose 1-epimerase CQJ30_03030 PF00356 Bacterial regulatory proteins, lacI family CQJ30_03030 PF13377 Periplasmic binding protein-like domain CQJ30_03035 PF00005 ABC transporter CQJ30_03040 PF13556 PucR C-terminal helix-turn-helix domain CQJ30_03045 PF07854 CQJ30_03045 CQJ30_03050 PF10112 CQJ30_03050 CQJ30_03055 PF05816 CQJ30_03055 CQJ30_03060 PF16868 CQJ30_03060 CQJ30_03065 PF08905 CQJ30_03065 CQJ30_03070 PF06808 CQJ30_03070 CQJ30_03075 PF01098 CQJ30_03075 CQJ30_03085 PF00571 CBS domain CQJ30_03085 PF01595 CQJ30_03085 CQJ30_03085 PF03471 Transporter associated domain CQJ30_03090 PF00571 CBS domain CQJ30_03090 PF01769 Divalent cation transporter CQJ30_03090 PF03448 MgtE intracellular N domain CQJ30_03100 PF01820 D-ala D-ala ligase N-terminus CQJ30_03100 PF07478 D-ala D-ala ligase C-terminus CQJ30_03105 PF01225 Mur ligase family, catalytic domain CQJ30_03105 PF02875 Mur ligase family, glutamate ligase domain CQJ30_03105 PF08245 Mur ligase middle domain CQJ30_03110 PF12146 Putative lysophospholipase CQJ30_03115 PF00270 DEAD/DEAH box helicase CQJ30_03115 PF00271 Helicase conserved C-terminal domain CQJ30_03120 PF03703 CQJ30_03120 CQJ30_03125 PF03703 CQJ30_03125 CQJ30_03130 PF01694 Rhomboid family CQJ30_03135 PF01648 4'-phosphopantetheinyl transferase superfamily CQJ30_03155 PF02452 PemK-like protein CQJ30_03160 PF00575 S1 RNA binding domain CQJ30_03160 PF09371 Tex-like protein N-terminal domain CQJ30_03160 PF12836 Helix-hairpin-helix motif CQJ30_03160 PF16921 CQJ30_03160 CQJ30_03170 PF10263 CQJ30_03170 CQJ30_03170 PF17283 CQJ30_03170 CQJ30_03175 PF01609 Transposase DDE domain CQJ30_03240 PF00814 Glycoprotease family CQJ30_03245 PF00583 Acetyltransferase (GNAT) family CQJ30_03250 PF00814 Glycoprotease family CQJ30_03255 PF02367 Uncharacterised P-loop hydrolase UPF0079 CQJ30_03260 PF00005 ABC transporter CQJ30_03260 PF12848 ABC transporter CQJ30_03260 PF16326 CQJ30_03260 CQJ30_03265 PF02629 CoA binding domain CQJ30_03265 PF06971 Putative DNA-binding protein N-terminus CQJ30_03270 PF02416 mttA/Hcf106 family CQJ30_03275 PF00902 Sec-independent protein translocase protein (TatC) CQJ30_03280 PF02517 CAAX protease self-immunity CQJ30_03285 PF00166 Chaperonin 10 Kd subunit CQJ30_03290 PF00118 TCP-1/cpn60 chaperonin family CQJ30_03295 PF00005 ABC transporter CQJ30_03300 PF00528 Binding-protein-dependent transport system inner membrane component CQJ30_03305 PF00528 Binding-protein-dependent transport system inner membrane component CQJ30_03310 PF13416 Bacterial extracellular solute-binding protein CQJ30_03315 PF03009 Glycerophosphoryl diester phosphodiesterase family CQJ30_03320 PF00440 Bacterial regulatory proteins, tetR family CQJ30_03325 PF00005 ABC transporter CQJ30_03325 PF00664 ABC transporter transmembrane region CQJ30_03330 PF00005 ABC transporter CQJ30_03330 PF00664 ABC transporter transmembrane region CQJ30_03340 PF01385 CQJ30_03340 CQJ30_03340 PF07282 CQJ30_03340 CQJ30_03340 PF12323 CQJ30_03340 CQJ30_03345 PF00239 Resolvase, N terminal domain CQJ30_03345 PF13411 MerR HTH family regulatory protein CQJ30_03350 PF01381 Helix-turn-helix CQJ30_03355 PF00691 OmpA family CQJ30_03360 PF12832 MFS_1 like family CQJ30_03375 PF00367 phosphotransferase system, EIIB CQJ30_03375 PF02378 Phosphotransferase system, EIIC CQJ30_03380 PF00874 PRD domain CQJ30_03380 PF03123 CAT RNA binding domain CQJ30_03385 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 CQJ30_03390 PF00860 Permease family CQJ30_03395 PF00206 Lyase CQJ30_03395 PF10415 Fumarase C C-terminus CQJ30_03400 PF05977 Transmembrane secretion effector CQJ30_03405 PF12844 Helix-turn-helix domain CQJ30_03410 PF07726 ATPase family associated with various cellular activities (AAA) CQJ30_03415 PF01882 CQJ30_03415 CQJ30_03420 PF01841 Transglutaminase-like superfamily CQJ30_03425 PF00117 Glutamine amidotransferase class-I CQJ30_03425 PF00958 GMP synthase C terminal domain CQJ30_03425 PF02540 NAD synthase CQJ30_03435 PF01381 Helix-turn-helix CQJ30_03445 PF00860 Permease family CQJ30_03450 PF00874 PRD domain CQJ30_03450 PF03123 CAT RNA binding domain CQJ30_03455 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 CQJ30_03455 PF00367 phosphotransferase system, EIIB CQJ30_03455 PF02378 Phosphotransferase system, EIIC CQJ30_03460 PF00381 PTS HPr component phosphorylation site CQJ30_03465 PF00391 PEP-utilising enzyme, mobile domain CQJ30_03465 PF02896 PEP-utilising enzyme, TIM barrel domain CQJ30_03465 PF05524 PEP-utilising enzyme, N-terminal CQJ30_03470 PF00206 Lyase CQJ30_03470 PF10397 Adenylosuccinate lyase C-terminus CQJ30_03475 PF11127 Protein of unknown function (DUF2892) CQJ30_03480 PF01979 Amidohydrolase family CQJ30_03480 PF13382 Adenine deaminase C-terminal domain CQJ30_03485 PF11258 Protein of unknown function (DUF3048) CQJ30_03485 PF17479 CQJ30_03485 CQJ30_03490 PF01371 Trp repressor protein CQJ30_03495 PF01884 PcrB family CQJ30_03500 PF00580 UvrD/REP helicase N-terminal domain CQJ30_03500 PF13361 UvrD-like helicase C-terminal domain CQJ30_03505 PF00533 BRCA1 C Terminus (BRCT) domain CQJ30_03505 PF01653 NAD-dependent DNA ligase adenylation domain CQJ30_03505 PF03119 NAD-dependent DNA ligase C4 zinc finger domain CQJ30_03505 PF03120 NAD-dependent DNA ligase OB-fold domain CQJ30_03505 PF12826 Helix-hairpin-helix motif CQJ30_03505 PF14520 Helix-hairpin-helix domain CQJ30_03510 PF07537 CamS sex pheromone cAM373 precursor CQJ30_03515 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain CQJ30_03515 PF02843 Phosphoribosylglycinamide synthetase, C domain CQJ30_03515 PF02844 Phosphoribosylglycinamide synthetase, N domain CQJ30_03520 PF01808 AICARFT/IMPCHase bienzyme CQJ30_03520 PF02142 MGS-like domain CQJ30_03525 PF00551 Formyl transferase CQJ30_03530 PF00586 AIR synthase related protein, N-terminal domain CQJ30_03530 PF02769 AIR synthase related protein, C-terminal domain CQJ30_03535 PF00156 Phosphoribosyl transferase domain CQJ30_03535 PF13537 Glutamine amidotransferase domain CQJ30_03540 PF00586 AIR synthase related protein, N-terminal domain CQJ30_03540 PF02769 AIR synthase related protein, C-terminal domain CQJ30_03545 PF13507 CobB/CobQ-like glutamine amidotransferase domain CQJ30_03550 PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase CQJ30_03555 PF01259 SAICAR synthetase CQJ30_03560 PF02222 ATP-grasp domain CQJ30_03560 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CQJ30_03565 PF00731 AIR carboxylase CQJ30_03570 PF03618 CQJ30_03570 CQJ30_03575 PF00391 PEP-utilising enzyme, mobile domain CQJ30_03575 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain CQJ30_03575 PF02896 PEP-utilising enzyme, TIM barrel domain CQJ30_03580 PF07997 Protein of unknown function (DUF1694) CQJ30_03585 PF02686 Glu-tRNAGln amidotransferase C subunit CQJ30_03590 PF01425 Amidase CQJ30_03595 PF02637 GatB domain CQJ30_03595 PF02934 GatB/GatE catalytic domain CQJ30_03600 PF14595 Thioredoxin CQJ30_03605 PF00248 Aldo/keto reductase family CQJ30_03610 PF00842 Alanine racemase, C-terminal domain CQJ30_03610 PF01168 Alanine racemase, N-terminal domain CQJ30_03615 PF00171 Aldehyde dehydrogenase family CQJ30_03620 PF00781 Diacylglycerol kinase catalytic domain CQJ30_03630 PF04012 CQJ30_03630 CQJ30_03635 PF09922 Cell wall-active antibiotics response protein (DUF2154) CQJ30_03640 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CQJ30_03640 PF07730 Histidine kinase CQJ30_03645 PF00072 Response regulator receiver domain CQJ30_03645 PF00196 Bacterial regulatory proteins, luxR family CQJ30_03655 PF00563 EAL domain CQJ30_03665 PF02687 CQJ30_03665 CQJ30_03665 PF12704 MacB-like periplasmic core domain CQJ30_03670 PF00005 ABC transporter CQJ30_03675 PF13437 HlyD family secretion protein CQJ30_03680 PF12850 Calcineurin-like phosphoesterase superfamily domain CQJ30_03685 PF00872 CQJ30_03685 CQJ30_03690 PF00324 Amino acid permease CQJ30_03695 PF14261 CQJ30_03695 CQJ30_03705 PF00440 Bacterial regulatory proteins, tetR family CQJ30_03710 PF00873 AcrB/AcrD/AcrF family CQJ30_03715 PF00005 ABC transporter CQJ30_03715 PF13732 CQJ30_03715 CQJ30_03720 PF12698 ABC-2 family transporter protein CQJ30_03730 PF01938 TRAM domain CQJ30_03730 PF05958 tRNA (Uracil-5-)-methyltransferase CQJ30_03735 PF01638 HxlR-like helix-turn-helix CQJ30_03740 PF00296 Luciferase-like monooxygenase CQJ30_03745 PF03358 NADPH-dependent FMN reductase CQJ30_03750 PF03551 Transcriptional regulator PadR-like family CQJ30_03770 PF06414 Zeta toxin CQJ30_03775 PF05598 CQJ30_03775 CQJ30_03775 PF13586 CQJ30_03775 CQJ30_03785 PF13274 CQJ30_03785 CQJ30_03785 PF15731 CQJ30_03785 CQJ30_03790 PF05139 Erythromycin esterase CQJ30_03800 PF13650 Aspartyl protease CQJ30_03805 PF00899 ThiF family CQJ30_03810 PF07726 ATPase family associated with various cellular activities (AAA) CQJ30_03815 PF01882 CQJ30_03815 CQJ30_03830 PF08780 Nucleotidyltransferase substrate binding protein like CQJ30_03840 PF12706 Beta-lactamase superfamily domain CQJ30_03845 PF01610 CQJ30_03845 CQJ30_03845 PF13542 CQJ30_03845 CQJ30_03845 PF14690 CQJ30_03845 CQJ30_03850 PF02069 Prokaryotic metallothionein CQJ30_03855 PF13412 Winged helix-turn-helix DNA-binding CQJ30_03860 PF05685 Putative restriction endonuclease CQJ30_03865 PF00356 Bacterial regulatory proteins, lacI family CQJ30_03865 PF13377 Periplasmic binding protein-like domain CQJ30_03880 PF06304 Protein of unknown function (DUF1048) CQJ30_03885 PF14066 CQJ30_03885 CQJ30_03890 PF01797 Transposase IS200 like CQJ30_03895 PF01385 CQJ30_03895 CQJ30_03895 PF07282 CQJ30_03895 CQJ30_03895 PF12323 CQJ30_03895 CQJ30_03905 PF02016 LD-carboxypeptidase CQJ30_03910 PF00356 Bacterial regulatory proteins, lacI family CQJ30_03910 PF13377 Periplasmic binding protein-like domain CQJ30_03915 PF01306 LacY proton/sugar symporter CQJ30_03920 PF00251 Glycosyl hydrolases family 32 N-terminal domain CQJ30_03920 PF08244 Glycosyl hydrolases family 32 C terminal CQJ30_03930 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CQJ30_03935 PF00171 Aldehyde dehydrogenase family CQJ30_03940 PF01047 MarR family CQJ30_03945 PF00255 Glutathione peroxidase CQJ30_03950 PF00753 Metallo-beta-lactamase superfamily CQJ30_03960 PF00528 Binding-protein-dependent transport system inner membrane component CQJ30_03965 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CQJ30_03970 PF07883 Cupin domain CQJ30_03975 PF01063 Aminotransferase class IV CQJ30_03980 PF00583 Acetyltransferase (GNAT) family CQJ30_03990 PF02554 CQJ30_03990 CQJ30_03990 PF13722 CQJ30_03990 CQJ30_03995 PF00072 Response regulator receiver domain CQJ30_03995 PF04397 LytTr DNA-binding domain CQJ30_04000 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CQJ30_04000 PF06580 CQJ30_04000 CQJ30_04000 PF07694 5TMR of 5TMR-LYT CQJ30_04000 PF13492 GAF domain CQJ30_04005 PF00872 CQJ30_04005 CQJ30_04020 PF04463 CQJ30_04020 CQJ30_04030 PF01386 Ribosomal L25p family CQJ30_04030 PF14693 Ribosomal protein TL5, C-terminal domain CQJ30_04035 PF00892 EamA-like transporter family CQJ30_04040 PF04892 CQJ30_04040 CQJ30_04045 PF00497 Bacterial extracellular solute-binding proteins, family 3 CQJ30_04050 PF00528 Binding-protein-dependent transport system inner membrane component CQJ30_04055 PF00005 ABC transporter CQJ30_04060 PF00929 Exonuclease CQJ30_04065 PF03445 CQJ30_04065 CQJ30_04065 PF10335 CQJ30_04065 CQJ30_04070 PF00909 Ammonium Transporter Family CQJ30_04075 PF00082 Subtilase family CQJ30_04075 PF02225 PA domain CQJ30_04075 PF05922 Peptidase inhibitor I9 CQJ30_04080 PF11756 CQJ30_04080 CQJ30_04085 PF02566 OsmC-like protein CQJ30_04090 PF03006 CQJ30_04090 CQJ30_04095 PF00501 AMP-binding enzyme CQJ30_04095 PF13193 AMP-binding enzyme C-terminal domain CQJ30_04100 PF08876 CQJ30_04100 CQJ30_04105 PF01593 Flavin containing amine oxidoreductase CQJ30_04115 PF06177 CQJ30_04115 CQJ30_04125 PF06738 CQJ30_04125 CQJ30_04130 PF12821 CQJ30_04130 CQJ30_04135 PF02681 CQJ30_04135 CQJ30_04150 PF00491 Arginase family CQJ30_04155 PF02272 DHHA1 domain CQJ30_04160 PF00563 EAL domain CQJ30_04160 PF00990 GGDEF domain CQJ30_04160 PF13426 PAS domain CQJ30_04160 PF17159 CQJ30_04160 CQJ30_04165 PF11345 CQJ30_04165 CQJ30_04170 PF11345 CQJ30_04170 CQJ30_04175 PF00990 GGDEF domain CQJ30_04180 PF01554 MatE CQJ30_04185 PF00512 His Kinase A (phospho-acceptor) domain CQJ30_04185 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CQJ30_04185 PF13426 PAS domain CQJ30_04190 PF03869 Arc-like DNA binding domain CQJ30_04195 PF01145 SPFH domain / Band 7 family CQJ30_04205 PF00122 E1-E2 ATPase CQJ30_04205 PF00689 Cation transporting ATPase, C-terminus CQJ30_04205 PF00690 Cation transporter/ATPase, N-terminus CQJ30_04205 PF00702 haloacid dehalogenase-like hydrolase CQJ30_04210 PF04023 FeoA domain CQJ30_04215 PF02421 Ferrous iron transport protein B CQJ30_04215 PF07664 CQJ30_04215 CQJ30_04215 PF07670 Nucleoside recognition CQJ30_04220 PF12669 CQJ30_04220 CQJ30_04225 PF00497 Bacterial extracellular solute-binding proteins, family 3 CQJ30_04230 PF00528 Binding-protein-dependent transport system inner membrane component CQJ30_04235 PF00005 ABC transporter CQJ30_04245 PF03358 NADPH-dependent FMN reductase CQJ30_04250 PF00005 ABC transporter CQJ30_04250 PF12848 ABC transporter CQJ30_04255 PF04402 Protein of unknown function (DUF541) CQJ30_04260 PF00487 CQJ30_04260 CQJ30_04265 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CQJ30_04265 PF07730 Histidine kinase CQJ30_04270 PF00072 Response regulator receiver domain CQJ30_04270 PF00196 Bacterial regulatory proteins, luxR family CQJ30_04275 PF11738 Protein of unknown function (DUF3298) CQJ30_04280 PF04055 Radical SAM superfamily CQJ30_04280 PF13353 4Fe-4S single cluster domain CQJ30_04285 PF01228 Glycine radical CQJ30_04285 PF02901 Pyruvate formate lyase CQJ30_04290 PF01943 CQJ30_04290 CQJ30_04295 PF01385 CQJ30_04295 CQJ30_04295 PF07282 CQJ30_04295 CQJ30_04300 PF03741 CQJ30_04300 CQJ30_04310 PF00557 Metallopeptidase family M24 CQJ30_04315 PF09350 CQJ30_04315 CQJ30_04320 PF06569 CQJ30_04320 CQJ30_04325 PF01451 Low molecular weight phosphotyrosine protein phosphatase CQJ30_04335 PF03631 CQJ30_04335 CQJ30_04340 PF00122 E1-E2 ATPase CQJ30_04340 PF00702 haloacid dehalogenase-like hydrolase CQJ30_04345 PF00083 Sugar (and other) transporter CQJ30_04345 PF07690 Major Facilitator Superfamily CQJ30_04355 PF14167 CQJ30_04355 CQJ30_04365 PF01522 Polysaccharide deacetylase CQJ30_04370 PF02733 Dak1 domain CQJ30_04375 PF02734 DAK2 domain CQJ30_04380 PF03610 PTS system fructose IIA component CQJ30_04385 PF01938 TRAM domain CQJ30_04385 PF05958 tRNA (Uracil-5-)-methyltransferase CQJ30_04395 PF01609 Transposase DDE domain CQJ30_04405 PF01609 Transposase DDE domain CQJ30_04420 PF02361 Cobalt transport protein CQJ30_04440 PF01047 MarR family CQJ30_04460 PF02683 CQJ30_04460 CQJ30_04465 PF00578 AhpC/TSA family CQJ30_04470 PF00072 Response regulator receiver domain CQJ30_04470 PF00486 Transcriptional regulatory protein, C terminal CQJ30_04475 PF00512 His Kinase A (phospho-acceptor) domain CQJ30_04475 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CQJ30_04480 PF02566 OsmC-like protein CQJ30_04485 PF03050 CQJ30_04485 CQJ30_04485 PF13005 CQJ30_04485 CQJ30_04485 PF13007 CQJ30_04485 CQJ30_04485 PF13817 CQJ30_04485 CQJ30_04490 PF05717 CQJ30_04490 CQJ30_04500 PF13649 Methyltransferase domain CQJ30_04505 PF00581 Rhodanese-like domain CQJ30_04505 PF01206 Sulfurtransferase TusA CQJ30_04510 PF13686 DsrE/DsrF/DrsH-like family CQJ30_04515 PF00581 Rhodanese-like domain CQJ30_04515 PF00753 Metallo-beta-lactamase superfamily CQJ30_04520 PF01206 Sulfurtransferase TusA CQJ30_04525 PF01925 CQJ30_04525 CQJ30_04530 PF02583 Metal-sensitive transcriptional repressor CQJ30_04535 PF00581 Rhodanese-like domain CQJ30_04540 PF00581 Rhodanese-like domain CQJ30_04545 PF00462 Glutaredoxin CQJ30_04565 PF00665 Integrase core domain CQJ30_04570 PF01695 IstB-like ATP binding protein CQJ30_04585 PF05717 CQJ30_04585 CQJ30_04590 PF03050 CQJ30_04590 CQJ30_04590 PF13005 CQJ30_04590 CQJ30_04590 PF13007 CQJ30_04590 CQJ30_04590 PF13817 CQJ30_04590 CQJ30_04610 PF01609 Transposase DDE domain CQJ30_04610 PF14104 CQJ30_04610 CQJ30_04625 PF02683 CQJ30_04625 CQJ30_04630 PF00578 AhpC/TSA family CQJ30_04635 PF00072 Response regulator receiver domain CQJ30_04635 PF00486 Transcriptional regulatory protein, C terminal CQJ30_04640 PF00512 His Kinase A (phospho-acceptor) domain CQJ30_04640 PF00672 HAMP domain CQJ30_04640 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CQJ30_04645 PF00704 Glycosyl hydrolases family 18 CQJ30_04650 PF01476 LysM domain CQJ30_04655 PF01476 LysM domain CQJ30_04660 PF13686 DsrE/DsrF/DrsH-like family CQJ30_04665 PF00462 Glutaredoxin CQJ30_04670 PF00581 Rhodanese-like domain CQJ30_04670 PF00753 Metallo-beta-lactamase superfamily CQJ30_04675 PF08241 Methyltransferase domain CQJ30_04685 PF02583 Metal-sensitive transcriptional repressor CQJ30_04690 PF01206 Sulfurtransferase TusA CQJ30_04695 PF13686 DsrE/DsrF/DrsH-like family CQJ30_04700 PF00581 Rhodanese-like domain CQJ30_04705 PF00581 Rhodanese-like domain CQJ30_04710 PF00581 Rhodanese-like domain CQJ30_04710 PF01206 Sulfurtransferase TusA CQJ30_04715 PF00581 Rhodanese-like domain CQJ30_04715 PF00753 Metallo-beta-lactamase superfamily CQJ30_04720 PF01206 Sulfurtransferase TusA CQJ30_04725 PF01925 CQJ30_04725 CQJ30_04735 PF01609 Transposase DDE domain CQJ30_04735 PF14104 CQJ30_04735 CQJ30_04745 PF12389 CQJ30_04745 CQJ30_04750 PF12389 CQJ30_04750 CQJ30_04760 PF00717 Peptidase S24-like CQJ30_04775 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system CQJ30_04775 PF05685 Putative restriction endonuclease CQJ30_04815 PF01384 CQJ30_04815 CQJ30_04825 PF13419 Haloacid dehalogenase-like hydrolase CQJ30_04830 PF13407 Periplasmic binding protein domain CQJ30_04835 PF00933 Glycosyl hydrolase family 3 N terminal domain CQJ30_04835 PF01915 Glycosyl hydrolase family 3 C-terminal domain CQJ30_04835 PF14310 Fibronectin type III-like domain CQJ30_04850 PF03275 UDP-galactopyranose mutase CQJ30_04850 PF13450 NAD(P)-binding Rossmann-like domain CQJ30_04855 PF01717 Cobalamin-independent synthase, Catalytic domain CQJ30_04860 PF14199 CQJ30_04860 CQJ30_04865 PF01381 Helix-turn-helix CQJ30_04870 PF01548 CQJ30_04870 CQJ30_04870 PF02371 CQJ30_04870 CQJ30_04885 PF02274 Amidinotransferase CQJ30_04890 PF04204 Homoserine O-succinyltransferase CQJ30_04910 PF07730 Histidine kinase CQJ30_04915 PF00072 Response regulator receiver domain CQJ30_04915 PF00196 Bacterial regulatory proteins, luxR family CQJ30_04920 PF00005 ABC transporter CQJ30_04920 PF13732 CQJ30_04920 CQJ30_04925 PF12698 ABC-2 family transporter protein CQJ30_04930 PF12698 ABC-2 family transporter protein CQJ30_04935 PF06081 CQJ30_04935 CQJ30_04935 PF11728 DUF939 C-terminal domain CQJ30_04945 PF00392 Bacterial regulatory proteins, gntR family CQJ30_04950 PF00005 ABC transporter CQJ30_04960 PF00361 NADH-Ubiquinone/plastoquinone (complex I), various chains CQJ30_04960 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus CQJ30_04965 PF10070 CQJ30_04965 CQJ30_04970 PF10057 CQJ30_04970 CQJ30_04975 PF00872 CQJ30_04975 CQJ30_04980 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain CQJ30_04980 PF13378 Enolase C-terminal domain-like CQJ30_04985 PF00561 alpha/beta hydrolase fold CQJ30_04990 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CQJ30_04990 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CQJ30_04990 PF16582 CQJ30_04990 CQJ30_04995 PF00425 chorismate binding enzyme CQJ30_05000 PF04308 CQJ30_05000 CQJ30_05005 PF01554 MatE CQJ30_05010 PF01048 Phosphorylase superfamily CQJ30_05015 PF05362 Lon protease (S16) C-terminal proteolytic domain CQJ30_05015 PF13654 AAA domain CQJ30_05020 PF12051 CQJ30_05020 CQJ30_05020 PF12698 ABC-2 family transporter protein CQJ30_05025 PF00196 Bacterial regulatory proteins, luxR family CQJ30_05040 PF00563 EAL domain CQJ30_05040 PF10388 EAL-domain associated signalling protein domain CQJ30_05045 PF00155 Aminotransferase class I and II CQJ30_05050 PF08443 RimK-like ATP-grasp domain CQJ30_05055 PF08443 RimK-like ATP-grasp domain CQJ30_05060 PF01507 Phosphoadenosine phosphosulfate reductase family CQJ30_05070 PF00175 Oxidoreductase NAD-binding domain CQJ30_05070 PF00258 Flavodoxin CQJ30_05070 PF00667 FAD binding domain CQJ30_05075 PF01077 Nitrite and sulphite reductase 4Fe-4S domain CQJ30_05075 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain CQJ30_05080 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CQJ30_05085 PF01903 CbiX CQJ30_05090 PF01747 ATP-sulfurylase CQJ30_05090 PF14306 PUA-like domain CQJ30_05095 PF01583 Adenylylsulphate kinase CQJ30_05100 PF00425 chorismate binding enzyme CQJ30_05100 PF04715 Anthranilate synthase component I, N terminal region CQJ30_05105 PF00117 Glutamine amidotransferase class-I CQJ30_05110 PF00591 Glycosyl transferase family, a/b domain CQJ30_05110 PF02885 Glycosyl transferase family, helical bundle domain CQJ30_05115 PF00218 Indole-3-glycerol phosphate synthase CQJ30_05120 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase CQJ30_05125 PF00291 Pyridoxal-phosphate dependent enzyme CQJ30_05130 PF00290 Tryptophan synthase alpha chain CQJ30_05135 PF01174 SNO glutamine amidotransferase family CQJ30_05140 PF01680 SOR/SNZ family CQJ30_05145 PF00155 Aminotransferase class I and II CQJ30_05145 PF00392 Bacterial regulatory proteins, gntR family CQJ30_05150 PF00881 Nitroreductase family CQJ30_05160 PF06949 CQJ30_05160 CQJ30_05165 PF00270 DEAD/DEAH box helicase CQJ30_05165 PF00271 Helicase conserved C-terminal domain CQJ30_05170 PF07690 Major Facilitator Superfamily CQJ30_05175 PF00892 EamA-like transporter family CQJ30_05180 PF01545 Cation efflux family CQJ30_05180 PF16916 CQJ30_05180 CQJ30_05185 PF01040 UbiA prenyltransferase family CQJ30_05190 PF00440 Bacterial regulatory proteins, tetR family CQJ30_05200 PF07690 Major Facilitator Superfamily CQJ30_05205 PF00392 Bacterial regulatory proteins, gntR family CQJ30_05205 PF02080 TrkA-C domain CQJ30_05210 PF00005 ABC transporter CQJ30_05210 PF00571 CBS domain CQJ30_05215 PF00528 Binding-protein-dependent transport system inner membrane component CQJ30_05215 PF04069 Substrate binding domain of ABC-type glycine betaine transport system CQJ30_05220 PF14501 GHKL domain CQJ30_05225 PF00248 Aldo/keto reductase family CQJ30_05230 PF01047 MarR family CQJ30_05235 PF00004 ATPase family associated with various cellular activities (AAA) CQJ30_05235 PF01434 Peptidase family M41 CQJ30_05235 PF06480 FtsH Extracellular CQJ30_05240 PF07739 TipAS antibiotic-recognition domain CQJ30_05240 PF13411 MerR HTH family regulatory protein CQJ30_05245 PF02322 CQJ30_05245 CQJ30_05250 PF01654 CQJ30_05250 CQJ30_05255 PF00753 Metallo-beta-lactamase superfamily CQJ30_05260 PF01654 CQJ30_05260 CQJ30_05265 PF02322 CQJ30_05265 CQJ30_05270 PF00005 ABC transporter CQJ30_05270 PF00664 ABC transporter transmembrane region CQJ30_05275 PF00005 ABC transporter CQJ30_05275 PF00664 ABC transporter transmembrane region CQJ30_05285 PF01497 Periplasmic binding protein CQJ30_05290 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain CQJ30_05290 PF07685 CobB/CobQ-like glutamine amidotransferase domain CQJ30_05295 PF00069 Protein kinase domain CQJ30_05305 PF12849 PBP superfamily domain CQJ30_05310 PF00528 Binding-protein-dependent transport system inner membrane component CQJ30_05315 PF00528 Binding-protein-dependent transport system inner membrane component CQJ30_05320 PF00005 ABC transporter CQJ30_05325 PF02311 AraC-like ligand binding domain CQJ30_05325 PF12833 Helix-turn-helix domain CQJ30_05330 PF06283 Trehalose utilisation CQJ30_05335 PF01261 Xylose isomerase-like TIM barrel CQJ30_05340 PF01408 Oxidoreductase family, NAD-binding Rossmann fold CQJ30_05340 PF02894 Oxidoreductase family, C-terminal alpha/beta domain CQJ30_05345 PF01261 Xylose isomerase-like TIM barrel CQJ30_05345 PF07582 AP endonuclease family 2 C terminus CQJ30_05350 PF01408 Oxidoreductase family, NAD-binding Rossmann fold CQJ30_05350 PF02894 Oxidoreductase family, C-terminal alpha/beta domain CQJ30_05355 PF03553 CQJ30_05355 CQJ30_05360 PF01235 CQJ30_05360 CQJ30_05365 PF14151 CQJ30_05365 CQJ30_05370 PF14152 CQJ30_05370 CQJ30_05375 PF02631 RecX family CQJ30_05380 PF08838 Protein of unknown function (DUF1811) CQJ30_05385 PF08176 CQJ30_05385 CQJ30_05390 PF04307 CQJ30_05390 CQJ30_05395 PF00730 HhH-GPD superfamily base excision DNA repair protein CQJ30_05395 PF14815 NUDIX domain CQJ30_05400 PF13561 Enoyl-(Acyl carrier protein) reductase CQJ30_05405 PF04259 CQJ30_05405 CQJ30_05410 PF04167 Protein of unknown function (DUF402) CQJ30_05415 PF00005 ABC transporter CQJ30_05415 PF00664 ABC transporter transmembrane region CQJ30_05420 PF01168 Alanine racemase, N-terminal domain CQJ30_05425 PF08543 Phosphomethylpyrimidine kinase CQJ30_05430 PF06081 CQJ30_05430 CQJ30_05435 PF07885 Ion channel CQJ30_05440 PF00578 AhpC/TSA family CQJ30_05445 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CQJ30_05445 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CQJ30_05450 PF01923 Cobalamin adenosyltransferase CQJ30_05455 PF01475 Ferric uptake regulator family CQJ30_05460 PF11023 CQJ30_05460 CQJ30_05465 PF14540 Nucleotidyltransferase-like CQJ30_05565 PF07563 Protein of unknown function (DUF1541) CQJ30_05570 PF01695 IstB-like ATP binding protein CQJ30_05575 PF00665 Integrase core domain CQJ30_05580 PF07563 Protein of unknown function (DUF1541) CQJ30_05590 PF01966 HD domain CQJ30_05595 PF00501 AMP-binding enzyme CQJ30_05595 PF13193 AMP-binding enzyme C-terminal domain CQJ30_05595 PF16177 CQJ30_05595 CQJ30_05600 PF04542 Sigma-70 region 2 CQJ30_05600 PF08281 Sigma-70, region 4 CQJ30_05610 PF02667 CQJ30_05610 CQJ30_05620 PF07261 Replication initiation and membrane attachment CQJ30_05630 PF08279 HTH domain CQJ30_05630 PF13280 CQJ30_05630 CQJ30_05660 PF01047 MarR family CQJ30_05665 PF13561 Enoyl-(Acyl carrier protein) reductase CQJ30_05670 PF05016 Plasmid stabilisation system protein CQJ30_05685 PF13751 CQJ30_05685 CQJ30_05690 PF02810 SEC-C motif CQJ30_05695 PF12728 Helix-turn-helix domain CQJ30_05700 PF02452 PemK-like protein CQJ30_05705 PF01381 Helix-turn-helix CQJ30_05710 PF02384 N-6 DNA Methylase CQJ30_05710 PF12161 HsdM N-terminal domain CQJ30_05715 PF02229 Transcriptional Coactivator p15 (PC4) CQJ30_05725 PF02554 CQJ30_05725 CQJ30_05725 PF13722 CQJ30_05725 CQJ30_05730 PF00581 Rhodanese-like domain CQJ30_05735 PF00581 Rhodanese-like domain CQJ30_05735 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CQJ30_05735 PF07992 Pyridine nucleotide-disulphide oxidoreductase CQJ30_05740 PF02583 Metal-sensitive transcriptional repressor CQJ30_05745 PF00581 Rhodanese-like domain CQJ30_05750 PF00462 Glutaredoxin CQJ30_05755 PF09382 RQC domain CQJ30_05755 PF13451 CQJ30_05755 CQJ30_05760 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CQJ30_05760 PF02743 Cache domain CQJ30_05765 PF00583 Acetyltransferase (GNAT) family CQJ30_05775 PF00072 Response regulator receiver domain CQJ30_05775 PF00486 Transcriptional regulatory protein, C terminal CQJ30_05780 PF00512 His Kinase A (phospho-acceptor) domain CQJ30_05780 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CQJ30_05785 PF17131 CQJ30_05785 CQJ30_05795 PF02535 CQJ30_05795 CQJ30_05800 PF01026 TatD related DNase CQJ30_05810 PF00072 Response regulator receiver domain CQJ30_05810 PF00486 Transcriptional regulatory protein, C terminal CQJ30_05815 PF00512 His Kinase A (phospho-acceptor) domain CQJ30_05815 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CQJ30_05820 PF09680 CQJ30_05820 CQJ30_05825 PF00149 Calcineurin-like phosphoesterase CQJ30_05825 PF12320 Type 5 capsule protein repressor C-terminal domain CQJ30_05830 PF13476 AAA domain CQJ30_05830 PF13558 Putative exonuclease SbcCD, C subunit CQJ30_05835 PF00269 Small, acid-soluble spore proteins, alpha/beta type CQJ30_05840 PF13489 Methyltransferase domain CQJ30_05845 PF00893 Small Multidrug Resistance protein CQJ30_05850 PF00893 Small Multidrug Resistance protein CQJ30_05865 PF13529 Peptidase_C39 like family CQJ30_05870 PF00581 Rhodanese-like domain CQJ30_05875 PF00586 AIR synthase related protein, N-terminal domain CQJ30_05875 PF02769 AIR synthase related protein, C-terminal domain CQJ30_05880 PF08141 CQJ30_05880 CQJ30_05885 PF00571 CBS domain CQJ30_05890 PF13520 Amino acid permease CQJ30_05895 PF12784 CQJ30_05895 CQJ30_05900 PF09983 CQJ30_05900 CQJ30_05920 PF00199 Catalase CQJ30_05920 PF01965 DJ-1/PfpI family CQJ30_05920 PF06628 Catalase-related immune-responsive CQJ30_05925 PF10990 CQJ30_05925 CQJ30_05930 PF12867 DinB superfamily CQJ30_05935 PF00271 Helicase conserved C-terminal domain CQJ30_05935 PF04851 Type III restriction enzyme, res subunit CQJ30_05935 PF11907 CQJ30_05935 CQJ30_05935 PF13091 PLD-like domain CQJ30_05940 PF00293 NUDIX domain CQJ30_05945 PF00005 ABC transporter CQJ30_05955 PF01425 Amidase CQJ30_05960 PF14184 CQJ30_05960 CQJ30_05965 PF05014 Nucleoside 2-deoxyribosyltransferase CQJ30_05970 PF12849 PBP superfamily domain CQJ30_05975 PF00528 Binding-protein-dependent transport system inner membrane component CQJ30_05980 PF00528 Binding-protein-dependent transport system inner membrane component CQJ30_05985 PF00005 ABC transporter CQJ30_05990 PF01895 PhoU domain CQJ30_05995 PF03741 CQJ30_05995 CQJ30_06000 PF00005 ABC transporter CQJ30_06000 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CQJ30_06005 PF00005 ABC transporter CQJ30_06005 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CQJ30_06010 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CQJ30_06015 PF00528 Binding-protein-dependent transport system inner membrane component CQJ30_06020 PF00528 Binding-protein-dependent transport system inner membrane component CQJ30_06020 PF12911 CQJ30_06020 CQJ30_06030 PF00440 Bacterial regulatory proteins, tetR family CQJ30_06035 PF17340 CQJ30_06035 CQJ30_06055 PF07299 Fibronectin-binding protein (FBP) CQJ30_06055 PF16571 CQJ30_06055 CQJ30_06065 PF17334 CQJ30_06065 CQJ30_06075 PF04284 CQJ30_06075 CQJ30_06080 PF09680 CQJ30_06080 CQJ30_06085 PF13411 MerR HTH family regulatory protein CQJ30_06090 PF00750 tRNA synthetases class I (R) CQJ30_06090 PF03485 Arginyl tRNA synthetase N terminal domain CQJ30_06090 PF05746 DALR anticodon binding domain CQJ30_06095 PF00724 NADH:flavin oxidoreductase / NADH oxidase family CQJ30_06100 PF00563 EAL domain CQJ30_06105 PF01032 FecCD transport family CQJ30_06110 PF01032 FecCD transport family CQJ30_06115 PF00005 ABC transporter CQJ30_06120 PF01497 Periplasmic binding protein CQJ30_06125 PF03417 Acyl-coenzyme A:6-aminopenicillanic acid acyl-transferase CQJ30_06130 PF10282 Lactonase, 7-bladed beta-propeller CQJ30_06135 PF00854 POT family CQJ30_06140 PF01131 DNA topoisomerase CQJ30_06140 PF01751 Toprim domain CQJ30_06140 PF13342 CQJ30_06140 CQJ30_06145 PF00248 Aldo/keto reductase family CQJ30_06150 PF00849 RNA pseudouridylate synthase CQJ30_06155 PF17326 CQJ30_06155 CQJ30_06160 PF06908 Protein of unknown function (DUF1273) CQJ30_06165 PF00085 Thioredoxin CQJ30_06170 PF02600 Disulfide bond formation protein DsbB CQJ30_06175 PF14148 CQJ30_06175 CQJ30_06180 PF00246 Zinc carboxypeptidase CQJ30_06185 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CQJ30_06185 PF03466 LysR substrate binding domain CQJ30_06205 PF17247 CQJ30_06205 CQJ30_06215 PF00392 Bacterial regulatory proteins, gntR family CQJ30_06215 PF07729 FCD domain CQJ30_06220 PF02754 CQJ30_06220 CQJ30_06225 PF02589 Uncharacterised ACR, YkgG family COG1556 CQJ30_06225 PF11870 CQJ30_06225 CQJ30_06225 PF13183 4Fe-4S dicluster domain CQJ30_06230 PF02589 Uncharacterised ACR, YkgG family COG1556 CQJ30_06240 PF07690 Major Facilitator Superfamily CQJ30_06245 PF13091 PLD-like domain CQJ30_06245 PF13396 CQJ30_06245 CQJ30_06250 PF00512 His Kinase A (phospho-acceptor) domain CQJ30_06250 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CQJ30_06250 PF08447 PAS fold CQJ30_06255 PF02416 mttA/Hcf106 family CQJ30_06260 PF00269 Small, acid-soluble spore proteins, alpha/beta type CQJ30_06275 PF14398 CQJ30_06275 CQJ30_06280 PF04286 CQJ30_06280 CQJ30_06285 PF06133 Protein of unknown function (DUF964) CQJ30_06290 PF08282 haloacid dehalogenase-like hydrolase CQJ30_06295 PF00501 AMP-binding enzyme CQJ30_06295 PF13193 AMP-binding enzyme C-terminal domain CQJ30_06300 PF07849 CQJ30_06300 CQJ30_06305 PF07992 Pyridine nucleotide-disulphide oxidoreductase CQJ30_06310 PF14120 CQJ30_06310 CQJ30_06315 PF00149 Calcineurin-like phosphoesterase CQJ30_06320 PF13514 AAA domain CQJ30_06325 PF01336 OB-fold nucleic acid binding domain CQJ30_06325 PF01966 HD domain CQJ30_06330 PF14147 CQJ30_06330 CQJ30_06335 PF13616 PPIC-type PPIASE domain CQJ30_06340 PF09680 CQJ30_06340 CQJ30_06345 PF09680 CQJ30_06345 CQJ30_06355 PF08963 Protein of unknown function (DUF1878) CQJ30_06360 PF01047 MarR family CQJ30_06365 PF17099 CQJ30_06365 CQJ30_06370 PF01230 HIT domain CQJ30_06375 PF00005 ABC transporter CQJ30_06380 PF05975 CQJ30_06380 CQJ30_06385 PF12787 CQJ30_06385 CQJ30_06390 PF01546 Peptidase family M20/M25/M40 CQJ30_06390 PF07687 Peptidase dimerisation domain CQJ30_06395 PF03992 Antibiotic biosynthesis monooxygenase CQJ30_06400 PF01208 Uroporphyrinogen decarboxylase (URO-D) CQJ30_06405 PF00762 Ferrochelatase CQJ30_06410 PF14149 CQJ30_06410 CQJ30_06415 PF12706 Beta-lactamase superfamily domain CQJ30_06420 PF03099 Biotin/lipoate A/B protein ligase family CQJ30_06420 PF10437 Bacterial lipoate protein ligase C-terminus CQJ30_06425 PF04392 ABC transporter substrate binding protein CQJ30_06430 PF03591 CQJ30_06430 CQJ30_06435 PF05437 CQJ30_06435 CQJ30_06440 PF01435 Peptidase family M48 CQJ30_06440 PF16491 CQJ30_06440 CQJ30_06445 PF08858 IDEAL domain CQJ30_06450 PF06338 CQJ30_06450 CQJ30_06460 PF09335 CQJ30_06460 CQJ30_06465 PF04257 Exodeoxyribonuclease V, gamma subunit CQJ30_06465 PF12705 PD-(D/E)XK nuclease superfamily CQJ30_06470 PF00580 UvrD/REP helicase N-terminal domain CQJ30_06470 PF12705 PD-(D/E)XK nuclease superfamily CQJ30_06470 PF13361 UvrD-like helicase C-terminal domain CQJ30_06475 PF10676 CQJ30_06475 CQJ30_06480 PF10970 CQJ30_06480 CQJ30_06490 PF10737 CQJ30_06490 CQJ30_06495 PF10803 CQJ30_06495 CQJ30_06500 PF01548 CQJ30_06500 CQJ30_06500 PF02371 CQJ30_06500 CQJ30_06505 PF10676 CQJ30_06505 CQJ30_06510 PF06782 CQJ30_06510 CQJ30_06515 PF07457 CQJ30_06515 CQJ30_06520 PF01385 CQJ30_06520 CQJ30_06520 PF07282 CQJ30_06520 CQJ30_06525 PF00563 EAL domain CQJ30_06525 PF00990 GGDEF domain CQJ30_06525 PF08495 CQJ30_06525 CQJ30_06530 PF10949 CQJ30_06530 CQJ30_06540 PF04461 Protein of unknown function (DUF520) CQJ30_06545 PF13081 CQJ30_06545 CQJ30_06550 PF02645 Uncharacterised protein, DegV family COG1307 CQJ30_06555 PF02588 CQJ30_06555 CQJ30_06555 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) CQJ30_06560 PF12758 CQJ30_06560 CQJ30_06565 PF08282 haloacid dehalogenase-like hydrolase CQJ30_06570 PF00326 Prolyl oligopeptidase family CQJ30_06575 PF01883 Domain of unknown function DUF59 CQJ30_06580 PF14168 CQJ30_06580 CQJ30_06585 PF11151 CQJ30_06585 CQJ30_06600 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal CQJ30_06600 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III CQJ30_06605 PF00109 Beta-ketoacyl synthase, N-terminal domain CQJ30_06605 PF02801 Beta-ketoacyl synthase, C-terminal domain CQJ30_06610 PF12227 CQJ30_06610 CQJ30_06615 PF08175 CQJ30_06615 CQJ30_06620 PF00579 tRNA synthetases class I (W and Y) CQJ30_06625 PF03960 ArsC family CQJ30_06630 PF05389 Negative regulator of genetic competence (MecA) CQJ30_06635 PF06054 CQJ30_06635 CQJ30_06640 PF01432 Peptidase family M3 CQJ30_06640 PF08439 Oligopeptidase F CQJ30_06650 PF13743 Thioredoxin CQJ30_06655 PF01152 Bacterial-like globin CQJ30_06660 PF01464 Transglycosylase SLT domain CQJ30_06665 PF01928 CYTH domain CQJ30_06670 PF04607 Region found in RelA / SpoT proteins CQJ30_06675 PF01513 ATP-NAD kinase CQJ30_06680 PF00849 RNA pseudouridylate synthase CQJ30_06685 PF00149 Calcineurin-like phosphoesterase CQJ30_06690 PF13561 Enoyl-(Acyl carrier protein) reductase CQJ30_06695 PF02661 Fic/DOC family CQJ30_06700 PF04231 Endonuclease I CQJ30_06710 PF10612 CQJ30_06710 CQJ30_06715 PF07098 CQJ30_06715 CQJ30_06725 PF13524 Glycosyl transferases group 1 CQJ30_06730 PF02350 UDP-N-acetylglucosamine 2-epimerase CQJ30_06735 PF02719 Polysaccharide biosynthesis protein CQJ30_06740 PF04321 RmlD substrate binding domain CQJ30_06745 PF01370 NAD dependent epimerase/dehydratase family CQJ30_06750 PF00535 Glycosyl transferase family 2 CQJ30_06760 PF03862 CQJ30_06760 CQJ30_06765 PF07451 Stage V sporulation protein AD (SpoVAD) CQJ30_06770 PF03862 CQJ30_06770 CQJ30_06775 PF09680 CQJ30_06775 CQJ30_06780 PF14069 CQJ30_06780 CQJ30_06790 PF13673 Acetyltransferase (GNAT) domain CQJ30_06795 PF13563 2'-5' RNA ligase superfamily CQJ30_06800 PF00756 Putative esterase CQJ30_06805 PF13509 S1 domain CQJ30_06810 PF01368 DHH family CQJ30_06810 PF02833 DHHA2 domain CQJ30_06815 PF05525 CQJ30_06815 CQJ30_06825 PF13472 GDSL-like Lipase/Acylhydrolase family CQJ30_06830 PF13420 Acetyltransferase (GNAT) domain CQJ30_06840 PF07690 Major Facilitator Superfamily CQJ30_06855 PF02230 Phospholipase/Carboxylesterase CQJ30_06860 PF02535 CQJ30_06860 CQJ30_06870 PF00872 CQJ30_06870 CQJ30_06875 PF06146 CQJ30_06875 CQJ30_06880 PF00583 Acetyltransferase (GNAT) family CQJ30_06885 PF01565 FAD binding domain CQJ30_06885 PF02913 FAD linked oxidases, C-terminal domain CQJ30_06890 PF00633 Helix-hairpin-helix motif CQJ30_06890 PF00730 HhH-GPD superfamily base excision DNA repair protein CQJ30_06895 PF00881 Nitroreductase family CQJ30_06900 PF00171 Aldehyde dehydrogenase family CQJ30_06905 PF00793 DAHP synthetase I family CQJ30_06905 PF01817 Chorismate mutase type II CQJ30_06910 PF02153 Prephenate dehydrogenase CQJ30_06915 PF00135 Carboxylesterase family CQJ30_06920 PF11007 CQJ30_06920 CQJ30_06925 PF12652 CQJ30_06925 CQJ30_06930 PF05067 Manganese containing catalase CQJ30_06935 PF00455 CQJ30_06935 CQJ30_06935 PF08220 DeoR-like helix-turn-helix domain CQJ30_06940 PF00294 pfkB family carbohydrate kinase CQJ30_06945 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CQJ30_06945 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CQJ30_06945 PF02378 Phosphotransferase system, EIIC CQJ30_06950 PF01814 Hemerythrin HHE cation binding domain CQJ30_06960 PF07690 Major Facilitator Superfamily CQJ30_06965 PF01609 Transposase DDE domain CQJ30_06965 PF14104 CQJ30_06965 CQJ30_06970 PF10006 CQJ30_06970 CQJ30_06975 PF01613 Flavin reductase like domain CQJ30_06980 PF01042 Endoribonuclease L-PSP CQJ30_07000 PF00696 Amino acid kinase family CQJ30_07000 PF01472 PUA domain CQJ30_07005 PF00171 Aldehyde dehydrogenase family CQJ30_07010 PF13561 Enoyl-(Acyl carrier protein) reductase CQJ30_07015 PF14257 CQJ30_07015 CQJ30_07020 PF00465 Iron-containing alcohol dehydrogenase CQJ30_07025 PF00392 Bacterial regulatory proteins, gntR family CQJ30_07030 PF00005 ABC transporter CQJ30_07045 PF00501 AMP-binding enzyme CQJ30_07045 PF13193 AMP-binding enzyme C-terminal domain CQJ30_07050 PF01521 Iron-sulphur cluster biosynthesis CQJ30_07055 PF00478 IMP dehydrogenase / GMP reductase domain CQJ30_07060 PF01262 Alanine dehydrogenase/PNT, C-terminal domain CQJ30_07060 PF05222 Alanine dehydrogenase/PNT, N-terminal domain CQJ30_07065 PF13520 Amino acid permease CQJ30_07075 PF00583 Acetyltransferase (GNAT) family CQJ30_07080 PF10026 CQJ30_07080 CQJ30_07085 PF07007 Protein of unknown function (DUF1311) CQJ30_07090 PF12784 CQJ30_07090 CQJ30_07100 PF00128 Alpha amylase, catalytic domain CQJ30_07100 PF16657 CQJ30_07100 CQJ30_07105 PF08282 haloacid dehalogenase-like hydrolase CQJ30_07115 PF00580 UvrD/REP helicase N-terminal domain CQJ30_07115 PF13361 UvrD-like helicase C-terminal domain CQJ30_07115 PF14169 CQJ30_07115 CQJ30_07120 PF00990 GGDEF domain CQJ30_07125 PF00440 Bacterial regulatory proteins, tetR family CQJ30_07130 PF12698 ABC-2 family transporter protein CQJ30_07135 PF00005 ABC transporter CQJ30_07140 PF13673 Acetyltransferase (GNAT) domain CQJ30_07145 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain CQJ30_07145 PF13378 Enolase C-terminal domain-like CQJ30_07150 PF01385 CQJ30_07150 CQJ30_07150 PF07282 CQJ30_07150 CQJ30_07160 PF13460 NADH(P)-binding CQJ30_07170 PF01609 Transposase DDE domain CQJ30_07200 PF01909 Nucleotidyltransferase domain CQJ30_07205 PF00271 Helicase conserved C-terminal domain CQJ30_07205 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) CQJ30_07205 PF04851 Type III restriction enzyme, res subunit CQJ30_07205 PF08463 CQJ30_07205 CQJ30_07205 PF13643 CQJ30_07205 CQJ30_07210 PF05525 CQJ30_07210 CQJ30_07215 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CQJ30_07215 PF00672 HAMP domain CQJ30_07215 PF12729 CQJ30_07215 CQJ30_07225 PF00176 SNF2 family N-terminal domain CQJ30_07225 PF00271 Helicase conserved C-terminal domain CQJ30_07225 PF04434 CQJ30_07225 CQJ30_07225 PF08455 CQJ30_07225 CQJ30_07245 PF00005 ABC transporter CQJ30_07245 PF12848 ABC transporter CQJ30_07255 PF09580 CQJ30_07255 CQJ30_07260 PF00107 Zinc-binding dehydrogenase CQJ30_07260 PF08240 Alcohol dehydrogenase GroES-like domain CQJ30_07265 PF00171 Aldehyde dehydrogenase family CQJ30_07270 PF00072 Response regulator receiver domain CQJ30_07270 PF00158 Sigma-54 interaction domain CQJ30_07270 PF02954 Bacterial regulatory protein, Fis family CQJ30_07275 PF00512 His Kinase A (phospho-acceptor) domain CQJ30_07275 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CQJ30_07275 PF13185 GAF domain CQJ30_07280 PF00465 Iron-containing alcohol dehydrogenase CQJ30_07285 PF03737 Demethylmenaquinone methyltransferase CQJ30_07295 PF00877 NlpC/P60 family CQJ30_07295 PF01476 LysM domain CQJ30_07310 PF07690 Major Facilitator Superfamily CQJ30_07315 PF00467 KOW motif CQJ30_07315 PF09953 CQJ30_07315 CQJ30_07325 PF00107 Zinc-binding dehydrogenase CQJ30_07325 PF08240 Alcohol dehydrogenase GroES-like domain CQJ30_07345 PF10997 CQJ30_07345 CQJ30_07360 PF03845 CQJ30_07360 CQJ30_07365 PF05504 Spore germination B3/ GerAC like, C-terminal CQJ30_07370 PF03323 CQJ30_07370 CQJ30_07380 PF00565 Staphylococcal nuclease homologue CQJ30_07385 PF00009 Elongation factor Tu GTP binding domain CQJ30_07385 PF03144 Elongation factor Tu domain 2 CQJ30_07385 PF16658 CQJ30_07385 CQJ30_07390 PF03741 CQJ30_07390 CQJ30_07395 PF00269 Small, acid-soluble spore proteins, alpha/beta type CQJ30_07400 PF02386 Cation transport protein CQJ30_07405 PF13529 Peptidase_C39 like family CQJ30_07410 PF00733 Asparagine synthase CQJ30_07410 PF13537 Glutamine amidotransferase domain CQJ30_07415 PF01757 CQJ30_07415 CQJ30_07420 PF09388 Spo0E like sporulation regulatory protein CQJ30_07425 PF00004 ATPase family associated with various cellular activities (AAA) CQJ30_07425 PF02151 UvrB/uvrC motif CQJ30_07425 PF07724 AAA domain (Cdc48 subfamily) CQJ30_07425 PF10431 C-terminal, D2-small domain, of ClpB protein CQJ30_07435 PF02517 CAAX protease self-immunity CQJ30_07440 PF09953 CQJ30_07440 CQJ30_07450 PF01476 LysM domain CQJ30_07450 PF07486 Cell Wall Hydrolase CQJ30_07455 PF13561 Enoyl-(Acyl carrier protein) reductase CQJ30_07460 PF00381 PTS HPr component phosphorylation site CQJ30_07465 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase CQJ30_07465 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase CQJ30_07470 PF00155 Aminotransferase class I and II CQJ30_07475 PF01584 CheW-like domain CQJ30_07480 PF14177 CQJ30_07480 CQJ30_07485 PF00149 Calcineurin-like phosphoesterase CQJ30_07490 PF00462 Glutaredoxin CQJ30_07495 PF08796 Protein of unknown function (DUF1797) CQJ30_07500 PF00571 CBS domain CQJ30_07505 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CQJ30_07505 PF03466 LysR substrate binding domain CQJ30_07510 PF00132 Bacterial transferase hexapeptide (six repeats) CQJ30_07510 PF08503 Tetrahydrodipicolinate succinyltransferase N-terminal CQJ30_07510 PF14602 Hexapeptide repeat of succinyl-transferase CQJ30_07515 PF01546 Peptidase family M20/M25/M40 CQJ30_07515 PF07687 Peptidase dimerisation domain CQJ30_07520 PF02080 TrkA-C domain CQJ30_07520 PF02254 TrkA-N domain CQJ30_07525 PF00753 Metallo-beta-lactamase superfamily CQJ30_07525 PF07521 RNA-metabolising metallo-beta-lactamase CQJ30_07530 PF07288 Protein of unknown function (DUF1447) CQJ30_07535 PF01327 Polypeptide deformylase CQJ30_07540 PF10368 Putative cell-wall binding lipoprotein CQJ30_07545 PF00676 Dehydrogenase E1 component CQJ30_07550 PF02779 Transketolase, pyrimidine binding domain CQJ30_07550 PF02780 Transketolase, C-terminal domain CQJ30_07555 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) CQJ30_07555 PF00364 Biotin-requiring enzyme CQJ30_07555 PF02817 e3 binding domain CQJ30_07560 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CQJ30_07560 PF07992 Pyridine nucleotide-disulphide oxidoreductase CQJ30_07565 PF13790 CQJ30_07565 CQJ30_07570 PF03060 Nitronate monooxygenase CQJ30_07575 PF05256 Uncharacterised protein family (UPF0223) CQJ30_07580 PF06335 Protein of unknown function (DUF1054) CQJ30_07585 PF00459 Inositol monophosphatase family CQJ30_07590 PF17259 CQJ30_07590 CQJ30_07595 PF00009 Elongation factor Tu GTP binding domain CQJ30_07595 PF00679 Elongation factor G C-terminus CQJ30_07595 PF03144 Elongation factor Tu domain 2 CQJ30_07595 PF14492 Elongation Factor G, domain II CQJ30_07600 PF14036 CQJ30_07600 CQJ30_07605 PF09963 CQJ30_07605 CQJ30_07610 PF09580 CQJ30_07610 CQJ30_07620 PF07408 Protein of unknown function (DUF1507) CQJ30_07625 PF01098 CQJ30_07625 CQJ30_07630 PF00289 Carbamoyl-phosphate synthase L chain, N-terminal domain CQJ30_07630 PF00364 Biotin-requiring enzyme CQJ30_07630 PF00682 HMGL-like CQJ30_07630 PF02436 Conserved carboxylase domain CQJ30_07630 PF02785 Biotin carboxylase C-terminal domain CQJ30_07630 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain CQJ30_07635 PF02628 CQJ30_07635 CQJ30_07640 PF01040 UbiA prenyltransferase family CQJ30_07645 PF00034 Cytochrome c CQJ30_07645 PF00116 Cytochrome C oxidase subunit II, periplasmic domain CQJ30_07645 PF02790 Cytochrome C oxidase subunit II, transmembrane domain CQJ30_07650 PF00115 Cytochrome C and Quinol oxidase polypeptide I CQJ30_07655 PF00510 Cytochrome c oxidase subunit III CQJ30_07660 PF03626 CQJ30_07660 CQJ30_07665 PF09678 CQJ30_07665 CQJ30_07670 PF04238 CQJ30_07670 CQJ30_07675 PF08868 YugN-like family CQJ30_07680 PF00188 Cysteine-rich secretory protein family CQJ30_07680 PF14504 CAP-associated N-terminal CQJ30_07685 PF14071 CQJ30_07685 CQJ30_07690 PF14003 CQJ30_07690 CQJ30_07695 PF06133 Protein of unknown function (DUF964) CQJ30_07700 PF09902 CQJ30_07700 CQJ30_07710 PF03602 Conserved hypothetical protein 95 CQJ30_07715 PF01467 Cytidylyltransferase CQJ30_07725 PF01734 Patatin-like phospholipase CQJ30_07730 PF05362 Lon protease (S16) C-terminal proteolytic domain CQJ30_07730 PF13180 PDZ domain CQJ30_07735 PF05636 HIGH Nucleotidyl Transferase CQJ30_07740 PF02620 CQJ30_07740 CQJ30_07745 PF01783 Ribosomal L32p protein family CQJ30_07750 PF13921 Myb-like DNA-binding domain CQJ30_07755 PF00583 Acetyltransferase (GNAT) family CQJ30_07760 PF02558 Ketopantoate reductase PanE/ApbA CQJ30_07760 PF08546 Ketopantoate reductase PanE/ApbA C terminal CQJ30_07765 PF11877 CQJ30_07765 CQJ30_07770 PF10079 CQJ30_07770 CQJ30_07775 PF02381 MraZ protein CQJ30_07780 PF01795 MraW methylase family CQJ30_07785 PF04977 Septum formation initiator CQJ30_07790 PF00905 Penicillin binding protein transpeptidase domain CQJ30_07790 PF03717 Penicillin-binding Protein dimerisation domain CQJ30_07790 PF03793 PASTA domain CQJ30_07795 PF00905 Penicillin binding protein transpeptidase domain CQJ30_07795 PF03717 Penicillin-binding Protein dimerisation domain CQJ30_07795 PF03793 PASTA domain CQJ30_07800 PF01225 Mur ligase family, catalytic domain CQJ30_07800 PF02875 Mur ligase family, glutamate ligase domain CQJ30_07800 PF08245 Mur ligase middle domain CQJ30_07805 PF00953 Glycosyl transferase family 4 CQJ30_07805 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 CQJ30_07810 PF02875 Mur ligase family, glutamate ligase domain CQJ30_07810 PF08245 Mur ligase middle domain CQJ30_07815 PF01098 CQJ30_07815 CQJ30_07820 PF03033 Glycosyltransferase family 28 N-terminal domain CQJ30_07820 PF04101 Glycosyltransferase family 28 C-terminal domain CQJ30_07825 PF08478 POTRA domain, FtsQ-type CQJ30_07830 PF05949 Bacterial protein of unknown function (DUF881) CQJ30_07835 PF05949 Bacterial protein of unknown function (DUF881) CQJ30_07840 PF06947 CQJ30_07840 CQJ30_07845 PF02491 SHS2 domain inserted in FTSA CQJ30_07845 PF14450 Cell division protein FtsA CQJ30_07850 PF00091 Tubulin/FtsZ family, GTPase domain CQJ30_07850 PF12327 FtsZ family, C-terminal domain CQJ30_07855 PF03419 CQJ30_07855 CQJ30_07860 PF04542 Sigma-70 region 2 CQJ30_07860 PF04545 Sigma-70, region 4 CQJ30_07865 PF04539 Sigma-70 region 3 CQJ30_07865 PF04542 Sigma-70 region 2 CQJ30_07865 PF04545 Sigma-70, region 4 CQJ30_07870 PF02578 Multi-copper polyphenol oxidoreductase laccase CQJ30_07875 PF01168 Alanine racemase, N-terminal domain CQJ30_07880 PF04472 Protein of unknown function (DUF552) CQJ30_07885 PF02325 CQJ30_07885 CQJ30_07890 PF01479 S4 domain CQJ30_07895 PF05103 DivIVA protein CQJ30_07905 PF00133 tRNA synthetases class I (I, L, M and V) CQJ30_07905 PF06827 Zinc finger found in FPG and IleRS CQJ30_07905 PF08264 Anticodon-binding domain of tRNA CQJ30_07915 PF01252 CQJ30_07915 CQJ30_07920 PF00849 RNA pseudouridylate synthase CQJ30_07920 PF01479 S4 domain CQJ30_07925 PF00156 Phosphoribosyl transferase domain CQJ30_07930 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain CQJ30_07930 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain CQJ30_07935 PF01979 Amidohydrolase family CQJ30_07940 PF00117 Glutamine amidotransferase class-I CQJ30_07940 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain CQJ30_07945 PF02142 MGS-like domain CQJ30_07945 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain CQJ30_07945 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain CQJ30_07950 PF00175 Oxidoreductase NAD-binding domain CQJ30_07950 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B CQJ30_07955 PF01180 Dihydroorotate dehydrogenase CQJ30_07960 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family CQJ30_07965 PF00156 Phosphoribosyl transferase domain CQJ30_07970 PF05670 CQJ30_07970 CQJ30_07970 PF05833 Fibronectin-binding protein A N-terminus (FbpA) CQJ30_07975 PF00122 E1-E2 ATPase CQJ30_07975 PF00689 Cation transporting ATPase, C-terminus CQJ30_07975 PF00690 Cation transporter/ATPase, N-terminus CQJ30_07975 PF00702 haloacid dehalogenase-like hydrolase CQJ30_07980 PF03755 CQJ30_07980 CQJ30_07980 PF08340 CQJ30_07980 CQJ30_07985 PF00625 Guanylate kinase CQJ30_07990 PF01192 RNA polymerase Rpb6 CQJ30_07995 PF02441 Flavoprotein CQJ30_07995 PF04127 DNA / pantothenate metabolism flavoprotein CQJ30_08000 PF00271 Helicase conserved C-terminal domain CQJ30_08000 PF04851 Type III restriction enzyme, res subunit CQJ30_08005 PF00551 Formyl transferase CQJ30_08005 PF02911 Formyl transferase, C-terminal domain CQJ30_08010 PF01029 NusB family CQJ30_08010 PF01189 NOL1/NOP2/sun family CQJ30_08015 PF13672 Protein phosphatase 2C CQJ30_08020 PF00069 Protein kinase domain CQJ30_08020 PF03793 PASTA domain CQJ30_08025 PF03193 Protein of unknown function, DUF258 CQJ30_08025 PF16745 CQJ30_08025 CQJ30_08030 PF00834 Ribulose-phosphate 3 epimerase family CQJ30_08035 PF04263 Thiamin pyrophosphokinase, catalytic domain CQJ30_08035 PF04265 Thiamin pyrophosphokinase, vitamin B1 binding domain CQJ30_08040 PF08183 CQJ30_08040 CQJ30_08045 PF00830 Ribosomal L28 family CQJ30_08050 PF03780 CQJ30_08050 CQJ30_08055 PF02734 DAK2 domain CQJ30_08055 PF13684 Dihydroxyacetone kinase family CQJ30_08060 PF01842 ACT domain CQJ30_08060 PF03315 Serine dehydratase beta chain CQJ30_08065 PF03313 CQJ30_08065 CQJ30_08070 PF00270 DEAD/DEAH box helicase CQJ30_08070 PF00271 Helicase conserved C-terminal domain CQJ30_08070 PF17191 CQJ30_08070 CQJ30_08075 PF03061 Thioesterase superfamily CQJ30_08080 PF02504 Fatty acid synthesis protein CQJ30_08085 PF00698 Acyl transferase domain CQJ30_08090 PF13561 Enoyl-(Acyl carrier protein) reductase CQJ30_08095 PF00550 Phosphopantetheine attachment site CQJ30_08100 PF00035 Double-stranded RNA binding motif CQJ30_08100 PF14622 Ribonuclease-III-like CQJ30_08105 PF02463 RecF/RecN/SMC N terminal domain CQJ30_08105 PF06470 SMC proteins Flexible Hinge Domain CQJ30_08110 PF00448 SRP54-type protein, GTPase domain CQJ30_08110 PF02881 SRP54-type protein, helical bundle domain CQJ30_08115 PF04297 Putative helix-turn-helix protein, YlxM / p13 like CQJ30_08120 PF00448 SRP54-type protein, GTPase domain CQJ30_08120 PF02881 SRP54-type protein, helical bundle domain CQJ30_08120 PF02978 Signal peptide binding domain CQJ30_08125 PF00886 Ribosomal protein S16 CQJ30_08130 PF13083 KH domain CQJ30_08135 PF11068 YlqD protein CQJ30_08140 PF01782 RimM N-terminal domain CQJ30_08140 PF05239 PRC-barrel domain CQJ30_08145 PF01746 tRNA (Guanine-1)-methyltransferase CQJ30_08150 PF01245 Ribosomal protein L19 CQJ30_08155 PF00717 Peptidase S24-like CQJ30_08160 PF01926 50S ribosome-binding GTPase CQJ30_08165 PF01351 Ribonuclease HII CQJ30_08175 PF01312 FlhB HrpN YscU SpaS Family CQJ30_08180 PF00549 CoA-ligase CQJ30_08180 PF08442 ATP-grasp domain CQJ30_08185 PF00549 CoA-ligase CQJ30_08185 PF02629 CoA binding domain CQJ30_08190 PF02481 DNA recombination-mediator protein A CQJ30_08195 PF01131 DNA topoisomerase CQJ30_08195 PF01396 CQJ30_08195 CQJ30_08195 PF01751 Toprim domain CQJ30_08200 PF00589 Phage integrase family CQJ30_08200 PF02899 Phage integrase, N-terminal SAM-like domain CQJ30_08205 PF00227 Proteasome subunit CQJ30_08210 PF00004 ATPase family associated with various cellular activities (AAA) CQJ30_08210 PF07724 AAA domain (Cdc48 subfamily) CQJ30_08210 PF10431 C-terminal, D2-small domain, of ClpB protein CQJ30_08215 PF06018 CodY GAF-like domain CQJ30_08215 PF08222 CodY helix-turn-helix domain CQJ30_08220 PF00460 Flagella basal body rod protein CQJ30_08225 PF00460 Flagella basal body rod protein CQJ30_08225 PF06429 Flagellar basal body rod FlgEFG protein C-terminal CQJ30_08230 PF02049 CQJ30_08230 CQJ30_08235 PF01514 Secretory protein of YscJ/FliF family CQJ30_08235 PF08345 CQJ30_08235 CQJ30_08240 PF01706 FliG C-terminal domain CQJ30_08240 PF14841 FliG middle domain CQJ30_08240 PF14842 FliG N-terminal domain CQJ30_08245 PF02108 CQJ30_08245 CQJ30_08250 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CQJ30_08250 PF02874 ATP synthase alpha/beta family, beta-barrel domain CQJ30_08255 PF02050 Flagellar FliJ protein CQJ30_08260 PF03448 MgtE intracellular N domain CQJ30_08265 PF02120 Flagellar hook-length control protein FliK CQJ30_08270 PF03963 CQJ30_08270 CQJ30_08275 PF12611 CQJ30_08275 CQJ30_08280 PF00460 Flagella basal body rod protein CQJ30_08280 PF06429 Flagellar basal body rod FlgEFG protein C-terminal CQJ30_08285 PF06289 CQJ30_08285 CQJ30_08290 PF03748 CQJ30_08290 CQJ30_08295 PF01052 Surface presentation of antigens (SPOA) CQJ30_08295 PF02154 Flagellar motor switch protein FliM CQJ30_08300 PF01052 Surface presentation of antigens (SPOA) CQJ30_08300 PF04509 CheC-like family CQJ30_08305 PF00072 Response regulator receiver domain CQJ30_08310 PF04347 CQJ30_08310 CQJ30_08315 PF00813 CQJ30_08315 CQJ30_08320 PF01313 CQJ30_08320 CQJ30_08325 PF01311 CQJ30_08325 CQJ30_08330 PF01312 FlhB HrpN YscU SpaS Family CQJ30_08335 PF00771 FHIPEP family CQJ30_08340 PF00448 SRP54-type protein, GTPase domain CQJ30_08345 PF10609 ParA/MinD ATPase like CQJ30_08350 PF00072 Response regulator receiver domain CQJ30_08350 PF01339 CheB methylesterase CQJ30_08355 PF01584 CheW-like domain CQJ30_08355 PF01627 Hpt domain CQJ30_08355 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CQJ30_08355 PF02895 Signal transducing histidine kinase, homodimeric domain CQJ30_08355 PF07194 P2 response regulator binding domain CQJ30_08360 PF01584 CheW-like domain CQJ30_08365 PF04509 CheC-like family CQJ30_08370 PF03975 CheD chemotactic sensory transduction CQJ30_08375 PF04539 Sigma-70 region 3 CQJ30_08375 PF04542 Sigma-70 region 2 CQJ30_08375 PF04545 Sigma-70, region 4 CQJ30_08390 PF00318 Ribosomal protein S2 CQJ30_08395 PF00889 Elongation factor TS CQJ30_08400 PF00696 Amino acid kinase family CQJ30_08405 PF01765 Ribosome recycling factor CQJ30_08410 PF01255 Putative undecaprenyl diphosphate synthase CQJ30_08415 PF01148 Cytidylyltransferase family CQJ30_08420 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase CQJ30_08420 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal CQJ30_08420 PF13288 DXP reductoisomerase C-terminal domain CQJ30_08425 PF02163 Peptidase family M50 CQJ30_08425 PF13180 PDZ domain CQJ30_08430 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CQJ30_08430 PF03129 Anticodon binding domain CQJ30_08430 PF04073 Aminoacyl-tRNA editing domain CQJ30_08435 PF01609 Transposase DDE domain CQJ30_08435 PF05598 CQJ30_08435 CQJ30_08440 PF00929 Exonuclease CQJ30_08440 PF02811 PHP domain CQJ30_08440 PF07733 Bacterial DNA polymerase III alpha subunit CQJ30_08440 PF11490 CQJ30_08440 CQJ30_08440 PF14480 CQJ30_08440 CQJ30_08440 PF14579 Helix-hairpin-helix motif CQJ30_08445 PF02576 Uncharacterised BCR, YhbC family COG0779 CQJ30_08445 PF17384 CQJ30_08445 CQJ30_08450 PF00575 S1 RNA binding domain CQJ30_08450 PF08529 NusA N-terminal domain CQJ30_08450 PF13184 NusA-like KH domain CQJ30_08455 PF04296 Protein of unknown function (DUF448) CQJ30_08460 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family CQJ30_08465 PF00009 Elongation factor Tu GTP binding domain CQJ30_08465 PF04760 Translation initiation factor IF-2, N-terminal region CQJ30_08465 PF11987 Translation-initiation factor 2 CQJ30_08470 PF04456 Protein of unknown function (DUF503) CQJ30_08475 PF02033 Ribosome-binding factor A CQJ30_08480 PF01509 TruB family pseudouridylate synthase (N terminal domain) CQJ30_08480 PF16198 CQJ30_08480 CQJ30_08485 PF01687 Riboflavin kinase CQJ30_08485 PF06574 FAD synthetase CQJ30_08490 PF00312 Ribosomal protein S15 CQJ30_08495 PF00013 KH domain CQJ30_08495 PF00575 S1 RNA binding domain CQJ30_08495 PF01138 3' exoribonuclease family, domain 1 CQJ30_08495 PF03725 3' exoribonuclease family, domain 2 CQJ30_08495 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain CQJ30_08500 PF01522 Polysaccharide deacetylase CQJ30_08505 PF00675 Insulinase (Peptidase family M16) CQJ30_08505 PF05193 Peptidase M16 inactive domain CQJ30_08510 PF05239 PRC-barrel domain CQJ30_08515 PF01262 Alanine dehydrogenase/PNT, C-terminal domain CQJ30_08515 PF16924 CQJ30_08515 CQJ30_08520 PF02441 Flavoprotein CQJ30_08525 PF01118 Semialdehyde dehydrogenase, NAD binding domain CQJ30_08525 PF02774 Semialdehyde dehydrogenase, dimerisation domain CQJ30_08530 PF00696 Amino acid kinase family CQJ30_08530 PF13840 ACT domain CQJ30_08535 PF00701 Dihydrodipicolinate synthetase family CQJ30_08540 PF00753 Metallo-beta-lactamase superfamily CQJ30_08540 PF07521 RNA-metabolising metallo-beta-lactamase CQJ30_08545 PF00574 Clp protease CQJ30_08550 PF14035 CQJ30_08550 CQJ30_08555 PF01580 FtsK/SpoIIIE family CQJ30_08555 PF09397 Ftsk gamma domain CQJ30_08560 PF02608 Basic membrane protein CQJ30_08565 PF00005 ABC transporter CQJ30_08570 PF02653 CQJ30_08570 CQJ30_08575 PF02653 CQJ30_08575 CQJ30_08580 PF05193 Peptidase M16 inactive domain CQJ30_08585 PF00675 Insulinase (Peptidase family M16) CQJ30_08585 PF05193 Peptidase M16 inactive domain CQJ30_08590 PF13561 Enoyl-(Acyl carrier protein) reductase CQJ30_08595 PF11588 Protein of unknown function (DUF3243) CQJ30_08600 PF11868 CQJ30_08600 CQJ30_08605 PF13413 Helix-turn-helix domain CQJ30_08605 PF13464 CQJ30_08605 CQJ30_08610 PF01066 CDP-alcohol phosphatidyltransferase CQJ30_08615 PF00994 Probable molybdopterin binding domain CQJ30_08615 PF02464 Competence-damaged protein CQJ30_08630 PF02639 CQJ30_08630 CQJ30_08635 PF00188 Cysteine-rich secretory protein family CQJ30_08640 PF16935 CQJ30_08640 CQJ30_08645 PF00128 Alpha amylase, catalytic domain CQJ30_08645 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) CQJ30_08650 PF00128 Alpha amylase, catalytic domain CQJ30_08650 PF02806 Alpha amylase, C-terminal all-beta domain CQJ30_08650 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) CQJ30_08655 PF00483 Nucleotidyl transferase CQJ30_08655 PF07959 CQJ30_08655 CQJ30_08660 PF00483 Nucleotidyl transferase CQJ30_08665 PF00534 Glycosyl transferases group 1 CQJ30_08665 PF08323 Starch synthase catalytic domain CQJ30_08670 PF00343 Carbohydrate phosphorylase CQJ30_08675 PF11132 CQJ30_08675 CQJ30_08685 PF10942 CQJ30_08685 CQJ30_08690 PF01643 Acyl-ACP thioesterase CQJ30_08695 PF01022 Bacterial regulatory protein, arsR family CQJ30_08700 PF01545 Cation efflux family CQJ30_08700 PF16916 CQJ30_08700 CQJ30_08705 PF02525 Flavodoxin-like fold CQJ30_08710 PF02219 Methylenetetrahydrofolate reductase CQJ30_08710 PF02574 Homocysteine S-methyltransferase CQJ30_08715 PF00809 Pterin binding enzyme CQJ30_08715 PF02310 B12 binding domain CQJ30_08715 PF02574 Homocysteine S-methyltransferase CQJ30_08715 PF02607 B12 binding domain CQJ30_08715 PF02965 Vitamin B12 dependent methionine synthase, activation domain CQJ30_08720 PF00248 Aldo/keto reductase family CQJ30_08725 PF00920 Dehydratase family CQJ30_08730 PF13419 Haloacid dehalogenase-like hydrolase CQJ30_08740 PF09580 CQJ30_08740 CQJ30_08745 PF02361 Cobalt transport protein CQJ30_08755 PF00005 ABC transporter CQJ30_08760 PF01040 UbiA prenyltransferase family CQJ30_08770 PF07301 CQJ30_08770 CQJ30_08775 PF04851 Type III restriction enzyme, res subunit CQJ30_08790 PF00939 Sodium:sulfate symporter transmembrane region CQJ30_08795 PF03190 Protein of unknown function, DUF255 CQJ30_08800 PF00154 recA bacterial DNA recombination protein CQJ30_08805 PF00013 KH domain CQJ30_08805 PF01966 HD domain CQJ30_08805 PF12072 CQJ30_08805 CQJ30_08810 PF13277 YmdB-like protein CQJ30_08815 PF04232 Stage V sporulation protein S (SpoVS) CQJ30_08820 PF00919 Uncharacterized protein family UPF0004 CQJ30_08820 PF01938 TRAM domain CQJ30_08820 PF04055 Radical SAM superfamily CQJ30_08825 PF06133 Protein of unknown function (DUF964) CQJ30_08830 PF00149 Calcineurin-like phosphoesterase CQJ30_08835 PF10628 CQJ30_08835 CQJ30_08840 PF00501 AMP-binding enzyme CQJ30_08840 PF13193 AMP-binding enzyme C-terminal domain CQJ30_08845 PF00488 MutS domain V CQJ30_08845 PF01624 MutS domain I CQJ30_08845 PF05188 MutS domain II CQJ30_08845 PF05190 MutS family domain IV CQJ30_08845 PF05192 MutS domain III CQJ30_08850 PF01119 DNA mismatch repair protein, C-terminal domain CQJ30_08850 PF08676 MutL C terminal dimerisation domain CQJ30_08850 PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CQJ30_08855 PF01715 IPP transferase CQJ30_08860 PF17209 CQJ30_08860 CQJ30_08865 PF00004 ATPase family associated with various cellular activities (AAA) CQJ30_08870 PF01926 50S ribosome-binding GTPase CQJ30_08870 PF13167 CQJ30_08870 CQJ30_08870 PF16360 CQJ30_08870 CQJ30_08875 PF06838 Methionine gamma-lyase CQJ30_08880 PF13411 MerR HTH family regulatory protein CQJ30_08885 PF00120 Glutamine synthetase, catalytic domain CQJ30_08885 PF03951 Glutamine synthetase, beta-Grasp domain CQJ30_08890 PF00717 Peptidase S24-like CQJ30_08890 PF01726 LexA DNA binding domain CQJ30_08900 PF00239 Resolvase, N terminal domain CQJ30_08905 PF05979 Bacterial protein of unknown function (DUF896) CQJ30_08910 PF10747 Protein of unknown function (DUF2522) CQJ30_08915 PF03672 CQJ30_08915 CQJ30_08920 PF00005 ABC transporter CQJ30_08920 PF00664 ABC transporter transmembrane region CQJ30_08925 PF00005 ABC transporter CQJ30_08925 PF00664 ABC transporter transmembrane region CQJ30_08930 PF02683 CQJ30_08930 CQJ30_08935 PF00072 Response regulator receiver domain CQJ30_08940 PF11084 CQJ30_08940 CQJ30_08945 PF03630 Fumble CQJ30_08955 PF00717 Peptidase S24-like CQJ30_08960 PF00924 Mechanosensitive ion channel CQJ30_08965 PF09680 CQJ30_08965 CQJ30_08970 PF03061 Thioesterase superfamily CQJ30_08975 PF03352 Methyladenine glycosylase CQJ30_08985 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CQJ30_08985 PF02770 Acyl-CoA dehydrogenase, middle domain CQJ30_08985 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CQJ30_08990 PF13561 Enoyl-(Acyl carrier protein) reductase CQJ30_08995 PF00440 Bacterial regulatory proteins, tetR family CQJ30_08995 PF08359 YsiA-like protein, C-terminal region CQJ30_09000 PF01636 Phosphotransferase enzyme family CQJ30_09005 PF04029 2-phosphosulpholactate phosphatase CQJ30_09010 PF00501 AMP-binding enzyme CQJ30_09010 PF13193 AMP-binding enzyme C-terminal domain CQJ30_09015 PF00501 AMP-binding enzyme CQJ30_09015 PF13193 AMP-binding enzyme C-terminal domain CQJ30_09020 PF00501 AMP-binding enzyme CQJ30_09020 PF13193 AMP-binding enzyme C-terminal domain CQJ30_09025 PF00107 Zinc-binding dehydrogenase CQJ30_09025 PF08240 Alcohol dehydrogenase GroES-like domain CQJ30_09030 PF13561 Enoyl-(Acyl carrier protein) reductase CQJ30_09035 PF13279 Thioesterase-like superfamily CQJ30_09040 PF00107 Zinc-binding dehydrogenase CQJ30_09040 PF16884 CQJ30_09040 CQJ30_09050 PF03698 CQJ30_09050 CQJ30_09055 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CQJ30_09055 PF02770 Acyl-CoA dehydrogenase, middle domain CQJ30_09055 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CQJ30_09060 PF03435 Saccharopine dehydrogenase CQJ30_09060 PF16653 CQJ30_09060 CQJ30_09065 PF00293 NUDIX domain CQJ30_09070 PF00293 NUDIX domain CQJ30_09075 PF04264 YceI-like domain CQJ30_09080 PF01638 HxlR-like helix-turn-helix CQJ30_09085 PF13180 PDZ domain CQJ30_09085 PF13365 Trypsin-like peptidase domain CQJ30_09090 PF09515 Thiamine transporter protein (Thia_YuaJ) CQJ30_09105 PF01546 Peptidase family M20/M25/M40 CQJ30_09105 PF07687 Peptidase dimerisation domain CQJ30_09110 PF00011 Hsp20/alpha crystallin family CQJ30_09115 PF08179 CQJ30_09115 CQJ30_09130 PF00330 Aconitase family (aconitate hydratase) CQJ30_09130 PF00694 Aconitase C-terminal domain CQJ30_09135 PF13040 CQJ30_09135 CQJ30_09140 PF08177 CQJ30_09140 CQJ30_09150 PF00004 ATPase family associated with various cellular activities (AAA) CQJ30_09155 PF03061 Thioesterase superfamily CQJ30_09165 PF13115 CQJ30_09165 CQJ30_09170 PF02096 60Kd inner membrane protein CQJ30_09180 PF07454 CQJ30_09180 CQJ30_09185 PF02660 CQJ30_09185 CQJ30_09195 PF01381 Helix-turn-helix CQJ30_09205 PF13380 CoA binding domain CQJ30_09210 PF00204 DNA gyrase B CQJ30_09210 PF00986 DNA gyrase B subunit, carboxyl terminus CQJ30_09210 PF01751 Toprim domain CQJ30_09210 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CQJ30_09215 PF00521 DNA gyrase/topoisomerase IV, subunit A CQJ30_09215 PF03989 DNA gyrase C-terminal domain, beta-propeller CQJ30_09220 PF02559 CarD-like/TRCF domain CQJ30_09230 PF14528 LAGLIDADG-like domain CQJ30_09235 PF01022 Bacterial regulatory protein, arsR family CQJ30_09240 PF05977 Transmembrane secretion effector CQJ30_09265 PF00454 Phosphatidylinositol 3- and 4-kinase CQJ30_09275 PF00300 Histidine phosphatase superfamily (branch 1) CQJ30_09280 PF04134 CQJ30_09280 CQJ30_09285 PF13328 HD domain CQJ30_09290 PF06949 CQJ30_09290 CQJ30_09295 PF00501 AMP-binding enzyme CQJ30_09295 PF13193 AMP-binding enzyme C-terminal domain CQJ30_09300 PF00183 Hsp90 protein CQJ30_09300 PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CQJ30_09305 PF05742 CQJ30_09305 CQJ30_09310 PF02146 Sir2 family CQJ30_09315 PF00171 Aldehyde dehydrogenase family CQJ30_09320 PF07993 Male sterility protein CQJ30_09325 PF00501 AMP-binding enzyme CQJ30_09330 PF00268 Ribonucleotide reductase, small chain CQJ30_09335 PF02036 SCP-2 sterol transfer family CQJ30_09340 PF00108 Thiolase, N-terminal domain CQJ30_09340 PF02803 Thiolase, C-terminal domain CQJ30_09345 PF00106 short chain dehydrogenase CQJ30_09345 PF13561 Enoyl-(Acyl carrier protein) reductase CQJ30_09350 PF00378 Enoyl-CoA hydratase/isomerase family CQJ30_09355 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CQJ30_09355 PF02770 Acyl-CoA dehydrogenase, middle domain CQJ30_09355 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CQJ30_09360 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CQJ30_09360 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CQJ30_09365 PF02036 SCP-2 sterol transfer family CQJ30_09375 PF00196 Bacterial regulatory proteins, luxR family CQJ30_09385 PF07690 Major Facilitator Superfamily CQJ30_09390 PF02679 (2R)-phospho-3-sulfolactate synthase (ComA) CQJ30_09395 PF00300 Histidine phosphatase superfamily (branch 1) CQJ30_09400 PF01507 Phosphoadenosine phosphosulfate reductase family CQJ30_09405 PF02588 CQJ30_09405 CQJ30_09415 PF13561 Enoyl-(Acyl carrier protein) reductase CQJ30_09425 PF00884 Sulfatase CQJ30_09435 PF00583 Acetyltransferase (GNAT) family CQJ30_09440 PF13304 AAA domain CQJ30_09440 PF13476 AAA domain CQJ30_09445 PF01934 Protein of unknown function DUF86 CQJ30_09450 PF01909 Nucleotidyltransferase domain CQJ30_09455 PF13314 CQJ30_09455 CQJ30_09460 PF01385 CQJ30_09460 CQJ30_09460 PF07282 CQJ30_09460 CQJ30_09470 PF03575 Peptidase family S51 CQJ30_09500 PF00665 Integrase core domain CQJ30_09505 PF01695 IstB-like ATP binding protein CQJ30_09520 PF13091 PLD-like domain CQJ30_09545 PF07875 CQJ30_09545 CQJ30_09555 PF07870 CQJ30_09555 CQJ30_09560 PF09580 CQJ30_09560 CQJ30_09565 PF03862 CQJ30_09565 CQJ30_09570 PF07451 Stage V sporulation protein AD (SpoVAD) CQJ30_09575 PF03862 CQJ30_09575 CQJ30_09580 PF07870 CQJ30_09580 CQJ30_09585 PF04239 Protein of unknown function (DUF421) CQJ30_09585 PF07870 CQJ30_09585 CQJ30_09595 PF13091 PLD-like domain CQJ30_09605 PF00665 Integrase core domain CQJ30_09605 PF13936 Helix-turn-helix domain CQJ30_09615 PF04239 Protein of unknown function (DUF421) CQJ30_09620 PF01526 CQJ30_09620 CQJ30_09620 PF13700 CQJ30_09620 CQJ30_09630 PF01520 N-acetylmuramoyl-L-alanine amidase CQJ30_09645 PF05977 Transmembrane secretion effector CQJ30_09650 PF01588 Putative tRNA binding domain CQJ30_09660 PF04073 Aminoacyl-tRNA editing domain CQJ30_09665 PF12146 Putative lysophospholipase CQJ30_09670 PF07690 Major Facilitator Superfamily CQJ30_09675 PF00004 ATPase family associated with various cellular activities (AAA) CQJ30_09675 PF02861 Clp amino terminal domain CQJ30_09675 PF07724 AAA domain (Cdc48 subfamily) CQJ30_09675 PF10431 C-terminal, D2-small domain, of ClpB protein CQJ30_09680 PF03401 Tripartite tricarboxylate transporter family receptor CQJ30_09685 PF01970 CQJ30_09685 CQJ30_09690 PF07331 CQJ30_09690 CQJ30_09700 PF13561 Enoyl-(Acyl carrier protein) reductase CQJ30_09705 PF01758 Sodium Bile acid symporter family CQJ30_09715 PF03323 CQJ30_09715 CQJ30_09720 PF03845 CQJ30_09720 CQJ30_09725 PF05504 Spore germination B3/ GerAC like, C-terminal CQJ30_09735 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CQJ30_09735 PF03466 LysR substrate binding domain CQJ30_09740 PF01925 CQJ30_09740 CQJ30_09745 PF16363 CQJ30_09745 CQJ30_09750 PF08795 CQJ30_09750 CQJ30_09755 PF00534 Glycosyl transferases group 1 CQJ30_09755 PF13439 Glycosyltransferase Family 4 CQJ30_09760 PF03567 Sulfotransferase family CQJ30_09765 PF00534 Glycosyl transferases group 1 CQJ30_09770 PF00535 Glycosyl transferase family 2 CQJ30_09775 PF00107 Zinc-binding dehydrogenase CQJ30_09775 PF08240 Alcohol dehydrogenase GroES-like domain CQJ30_09780 PF02126 Phosphotriesterase family CQJ30_09785 PF03069 Acetamidase/Formamidase family CQJ30_09790 PF03006 CQJ30_09790 CQJ30_09795 PF00742 Homoserine dehydrogenase CQJ30_09795 PF03447 Homoserine dehydrogenase, NAD binding domain CQJ30_09800 PF01487 Type I 3-dehydroquinase CQJ30_09805 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CQJ30_09805 PF12793 CQJ30_09805 CQJ30_09810 PF07690 Major Facilitator Superfamily CQJ30_09815 PF01526 CQJ30_09815 CQJ30_09815 PF13700 CQJ30_09815 CQJ30_09825 PF13701 CQJ30_09825 CQJ30_09835 PF03625 Domain of unknown function DUF302 CQJ30_09840 PF07731 Multicopper oxidase CQJ30_09840 PF07732 Multicopper oxidase CQJ30_09845 PF03860 Domain of Unknown Function (DUF326) CQJ30_09870 PF09851 CQJ30_09870 CQJ30_09875 PF00512 His Kinase A (phospho-acceptor) domain CQJ30_09875 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CQJ30_09880 PF00072 Response regulator receiver domain CQJ30_09880 PF00486 Transcriptional regulatory protein, C terminal CQJ30_09890 PF00239 Resolvase, N terminal domain CQJ30_09890 PF02796 Helix-turn-helix domain of resolvase CQJ30_09900 PF01202 Shikimate kinase CQJ30_09905 PF08501 Shikimate dehydrogenase substrate binding domain CQJ30_09910 PF00800 Prephenate dehydratase CQJ30_09910 PF01817 Chorismate mutase type II CQJ30_09915 PF01264 Chorismate synthase CQJ30_09920 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) CQJ30_09925 PF01761 3-dehydroquinate synthase CQJ30_09935 PF08282 haloacid dehalogenase-like hydrolase CQJ30_09940 PF02558 Ketopantoate reductase PanE/ApbA CQJ30_09940 PF08546 Ketopantoate reductase PanE/ApbA C terminal CQJ30_09945 PF00877 NlpC/P60 family CQJ30_09950 PF00696 Amino acid kinase family CQJ30_09950 PF13840 ACT domain CQJ30_09955 PF01925 CQJ30_09955 CQJ30_09960 PF00905 Penicillin binding protein transpeptidase domain CQJ30_09960 PF03717 Penicillin-binding Protein dimerisation domain CQJ30_09960 PF05223 NTF2-like N-terminal transpeptidase domain CQJ30_09965 PF07929 Plasmid pRiA4b ORF-3-like protein CQJ30_09970 PF07609 CQJ30_09970 CQJ30_09975 PF13586 CQJ30_09975 CQJ30_09980 PF10117 CQJ30_09980 CQJ30_09985 PF01878 EVE domain CQJ30_09985 PF07728 AAA domain (dynein-related subfamily) CQJ30_09990 PF01609 Transposase DDE domain CQJ30_10005 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) CQJ30_10010 PF01420 Type I restriction modification DNA specificity domain CQJ30_10015 PF02384 N-6 DNA Methylase CQJ30_10015 PF12161 HsdM N-terminal domain CQJ30_10025 PF00881 Nitroreductase family CQJ30_10030 PF00528 Binding-protein-dependent transport system inner membrane component CQJ30_10035 PF04069 Substrate binding domain of ABC-type glycine betaine transport system CQJ30_10040 PF00528 Binding-protein-dependent transport system inner membrane component CQJ30_10045 PF00005 ABC transporter CQJ30_10045 PF00571 CBS domain CQJ30_10050 PF00068 Phospholipase A2 CQJ30_10050 PF08398 CQJ30_10050 CQJ30_10055 PF02452 PemK-like protein CQJ30_10060 PF04014 Antidote-toxin recognition MazE CQJ30_10065 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain CQJ30_10065 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain CQJ30_10070 PF00274 Fructose-bisphosphate aldolase class-I CQJ30_10075 PF00892 EamA-like transporter family CQJ30_10080 PF01966 HD domain CQJ30_10100 PF13159 CQJ30_10100 CQJ30_10105 PF13421 CQJ30_10105 CQJ30_10110 PF04536 TLP18 CQJ30_10120 PF04012 CQJ30_10120 CQJ30_10140 PF01965 DJ-1/PfpI family CQJ30_10145 PF03881 Fructosamine kinase CQJ30_10160 PF01797 Transposase IS200 like CQJ30_10170 PF02588 CQJ30_10170 CQJ30_10170 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) CQJ30_10175 PF00491 Arginase family CQJ30_10185 PF01276 Orn/Lys/Arg decarboxylase, major domain CQJ30_10185 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain CQJ30_10195 PF00132 Bacterial transferase hexapeptide (six repeats) CQJ30_10200 PF01385 CQJ30_10200 CQJ30_10200 PF07282 CQJ30_10200 CQJ30_10210 PF02592 CQJ30_10210 CQJ30_10215 PF06508 Queuosine biosynthesis protein QueC CQJ30_10220 PF14489 QueF-like protein CQJ30_10225 PF04055 Radical SAM superfamily CQJ30_10225 PF13394 4Fe-4S single cluster domain CQJ30_10230 PF00005 ABC transporter CQJ30_10235 PF00528 Binding-protein-dependent transport system inner membrane component CQJ30_10240 PF01910 Domain of unknown function DUF77 CQJ30_10245 PF09084 NMT1/THI5 like CQJ30_10250 PF01963 CQJ30_10250 CQJ30_10260 PF14179 CQJ30_10260 CQJ30_10265 PF09680 CQJ30_10265 CQJ30_10270 PF09680 CQJ30_10270 CQJ30_10275 PF00188 Cysteine-rich secretory protein family CQJ30_10275 PF14504 CAP-associated N-terminal CQJ30_10280 PF02645 Uncharacterised protein, DegV family COG1307 CQJ30_10285 PF03372 Endonuclease/Exonuclease/phosphatase family CQJ30_10290 PF01618 CQJ30_10290 CQJ30_10295 PF00691 OmpA family CQJ30_10295 PF13677 CQJ30_10295 CQJ30_10300 PF00075 RNase H CQJ30_10300 PF01693 Caulimovirus viroplasmin CQJ30_10310 PF00293 NUDIX domain CQJ30_10315 PF01569 PAP2 superfamily CQJ30_10320 PF00005 ABC transporter CQJ30_10320 PF00664 ABC transporter transmembrane region CQJ30_10325 PF00005 ABC transporter CQJ30_10325 PF00664 ABC transporter transmembrane region CQJ30_10330 PF00107 Zinc-binding dehydrogenase CQJ30_10335 PF01553 Acyltransferase CQJ30_10350 PF01053 Cys/Met metabolism PLP-dependent enzyme CQJ30_10355 PF01258 Prokaryotic dksA/traR C4-type zinc finger CQJ30_10360 PF00149 Calcineurin-like phosphoesterase CQJ30_10370 PF10710 CQJ30_10370 CQJ30_10375 PF01625 Peptide methionine sulfoxide reductase CQJ30_10385 PF07690 Major Facilitator Superfamily CQJ30_10390 PF01053 Cys/Met metabolism PLP-dependent enzyme CQJ30_10395 PF00291 Pyridoxal-phosphate dependent enzyme CQJ30_10400 PF01609 Transposase DDE domain CQJ30_10405 PF00291 Pyridoxal-phosphate dependent enzyme CQJ30_10410 PF02664 S-Ribosylhomocysteinase (LuxS) CQJ30_10415 PF13649 Methyltransferase domain CQJ30_10425 PF01741 Large-conductance mechanosensitive channel, MscL CQJ30_10435 PF04101 Glycosyltransferase family 28 C-terminal domain CQJ30_10435 PF06925 CQJ30_10435 CQJ30_10440 PF13473 Cupredoxin-like domain CQJ30_10450 PF13217 CQJ30_10450 CQJ30_10455 PF02632 BioY family CQJ30_10460 PF02537 CQJ30_10460 CQJ30_10465 PF02537 CQJ30_10465 CQJ30_10470 PF01256 Carbohydrate kinase CQJ30_10470 PF03853 YjeF-related protein N-terminus CQJ30_10480 PF01883 Domain of unknown function DUF59 CQJ30_10485 PF07690 Major Facilitator Superfamily CQJ30_10495 PF01609 Transposase DDE domain CQJ30_10495 PF05598 CQJ30_10495 CQJ30_10495 PF13808 CQJ30_10495 CQJ30_10500 PF01810 CQJ30_10500 CQJ30_10505 PF00324 Amino acid permease CQJ30_10515 PF00313 'Cold-shock' DNA-binding domain CQJ30_10520 PF00313 'Cold-shock' DNA-binding domain CQJ30_10525 PF00080 Copper/zinc superoxide dismutase (SODC) CQJ30_10530 PF02735 Ku70/Ku80 beta-barrel domain CQJ30_10535 PF01068 ATP dependent DNA ligase domain CQJ30_10540 PF01678 Diaminopimelate epimerase CQJ30_10545 PF00578 AhpC/TSA family CQJ30_10555 PF13302 Acetyltransferase (GNAT) domain CQJ30_10570 PF01471 Putative peptidoglycan binding domain CQJ30_10570 PF03572 Peptidase family S41 CQJ30_10570 PF13180 PDZ domain CQJ30_10575 PF02557 D-alanyl-D-alanine carboxypeptidase CQJ30_10580 PF01048 Phosphorylase superfamily CQJ30_10590 PF07070 CQJ30_10590 CQJ30_10600 PF06855 Protein of unknown function (DUF1250) CQJ30_10605 PF01641 SelR domain CQJ30_10610 PF01625 Peptide methionine sulfoxide reductase CQJ30_10615 PF01189 NOL1/NOP2/sun family CQJ30_10615 PF13636 pre-rRNA processing and ribosome biogenesis CQJ30_10615 PF17125 CQJ30_10615 CQJ30_10615 PF17126 CQJ30_10615 CQJ30_10620 PF09911 CQJ30_10620 CQJ30_10625 PF13472 GDSL-like Lipase/Acylhydrolase family CQJ30_10630 PF02630 SCO1/SenC CQJ30_10635 PF02645 Uncharacterised protein, DegV family COG1307 CQJ30_10640 PF02586 Uncharacterised ACR, COG2135 CQJ30_10645 PF00186 Dihydrofolate reductase CQJ30_10650 PF00303 Thymidylate synthase CQJ30_10660 PF06491 Disulphide isomerase CQJ30_10665 PF08712 Scaffold protein Nfu/NifU N terminal CQJ30_10665 PF13646 HEAT repeats CQJ30_10665 PF13769 CQJ30_10665 CQJ30_10670 PF00005 ABC transporter CQJ30_10670 PF12848 ABC transporter CQJ30_10670 PF16326 CQJ30_10670 CQJ30_10680 PF01268 Formate--tetrahydrofolate ligase CQJ30_10685 PF13031 CQJ30_10685 CQJ30_10690 PF01325 Iron dependent repressor, N-terminal DNA binding domain CQJ30_10690 PF02742 Iron dependent repressor, metal binding and dimerisation domain CQJ30_10695 PF00313 'Cold-shock' DNA-binding domain CQJ30_10700 PF10782 CQJ30_10700 CQJ30_10705 PF13456 Reverse transcriptase-like CQJ30_10710 PF00892 EamA-like transporter family CQJ30_10730 PF01609 Transposase DDE domain CQJ30_10730 PF05598 CQJ30_10730 CQJ30_10735 PF01367 5'-3' exonuclease, C-terminal SAM fold CQJ30_10735 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain CQJ30_10740 PF00512 His Kinase A (phospho-acceptor) domain CQJ30_10740 PF00672 HAMP domain CQJ30_10740 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CQJ30_10745 PF00072 Response regulator receiver domain CQJ30_10745 PF00486 Transcriptional regulatory protein, C terminal CQJ30_10750 PF07563 Protein of unknown function (DUF1541) CQJ30_10755 PF02535 CQJ30_10755 CQJ30_10760 PF00122 E1-E2 ATPase CQJ30_10760 PF00702 haloacid dehalogenase-like hydrolase CQJ30_10765 PF13386 CQJ30_10765 CQJ30_10770 PF04945 YHS domain CQJ30_10775 PF00122 E1-E2 ATPase CQJ30_10775 PF00403 Heavy-metal-associated domain CQJ30_10775 PF00702 haloacid dehalogenase-like hydrolase CQJ30_10780 PF00403 Heavy-metal-associated domain CQJ30_10785 PF03965 Penicillinase repressor CQJ30_10790 PF02583 Metal-sensitive transcriptional repressor CQJ30_10810 PF03860 Domain of Unknown Function (DUF326) CQJ30_10815 PF08241 Methyltransferase domain CQJ30_10820 PF00394 Multicopper oxidase CQJ30_10820 PF07731 Multicopper oxidase CQJ30_10820 PF07732 Multicopper oxidase CQJ30_10830 PF03625 Domain of unknown function DUF302 CQJ30_10860 PF01551 Peptidase family M23 CQJ30_10865 PF01077 Nitrite and sulphite reductase 4Fe-4S domain CQJ30_10870 PF05598 CQJ30_10870 CQJ30_10870 PF13586 CQJ30_10870 CQJ30_10875 PF01844 HNH endonuclease CQJ30_10885 PF01381 Helix-turn-helix CQJ30_10890 PF01609 Transposase DDE domain CQJ30_10900 PF00581 Rhodanese-like domain CQJ30_10900 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CQJ30_10900 PF07992 Pyridine nucleotide-disulphide oxidoreductase CQJ30_10910 PF02040 CQJ30_10910 CQJ30_10915 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CQJ30_10920 PF01022 Bacterial regulatory protein, arsR family CQJ30_10925 PF01758 Sodium Bile acid symporter family CQJ30_10930 PF05425 CQJ30_10930 CQJ30_10935 PF04234 CopC domain CQJ30_10940 PF00122 E1-E2 ATPase CQJ30_10940 PF00403 Heavy-metal-associated domain CQJ30_10940 PF00702 haloacid dehalogenase-like hydrolase CQJ30_10945 PF01022 Bacterial regulatory protein, arsR family CQJ30_10950 PF03596 CQJ30_10950 CQJ30_10955 PF00394 Multicopper oxidase CQJ30_10955 PF07731 Multicopper oxidase CQJ30_10955 PF07732 Multicopper oxidase CQJ30_10960 PF01790 CQJ30_10960 CQJ30_10965 PF13701 CQJ30_10965 CQJ30_10970 PF11666 CQJ30_10970 CQJ30_10975 PF04693 CQJ30_10975 CQJ30_10975 PF13546 CQJ30_10975 CQJ30_10990 PF03050 CQJ30_10990 CQJ30_10990 PF13005 CQJ30_10990 CQJ30_10990 PF13007 CQJ30_10990 CQJ30_10990 PF13817 CQJ30_10990 CQJ30_10995 PF05717 CQJ30_10995 CQJ30_11005 PF04851 Type III restriction enzyme, res subunit CQJ30_11005 PF07669 Eco57I restriction-modification methylase CQJ30_11030 PF00589 Phage integrase family CQJ30_11030 PF02899 Phage integrase, N-terminal SAM-like domain CQJ30_11050 PF13401 AAA domain CQJ30_11055 PF09299 Mu transposase, C-terminal CQJ30_11075 PF13614 AAA domain CQJ30_11080 PF04693 CQJ30_11080 CQJ30_11080 PF13546 CQJ30_11080 CQJ30_11090 PF05598 CQJ30_11090 CQJ30_11090 PF13586 CQJ30_11090 CQJ30_11095 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain CQJ30_11100 PF00350 Dynamin family CQJ30_11105 PF00860 Permease family CQJ30_11115 PF00563 EAL domain CQJ30_11115 PF08668 HDOD domain CQJ30_11120 PF02074 Carboxypeptidase Taq (M32) metallopeptidase CQJ30_11130 PF01170 Putative RNA methylase family UPF0020 CQJ30_11130 PF02926 THUMP domain CQJ30_11140 PF05103 DivIVA protein CQJ30_11145 PF11122 CQJ30_11145 CQJ30_11155 PF13482 RNase_H superfamily CQJ30_11160 PF00270 DEAD/DEAH box helicase CQJ30_11160 PF00271 Helicase conserved C-terminal domain CQJ30_11160 PF09369 CQJ30_11160 CQJ30_11165 PF00011 Hsp20/alpha crystallin family CQJ30_11170 PF14179 CQJ30_11170 CQJ30_11175 PF08807 Bacterial domain of unknown function (DUF1798) CQJ30_11190 PF03838 Recombination protein U CQJ30_11195 PF00041 Fibronectin type III domain CQJ30_11195 PF00905 Penicillin binding protein transpeptidase domain CQJ30_11195 PF00912 Transglycosylase CQJ30_11205 PF00633 Helix-hairpin-helix motif CQJ30_11205 PF00730 HhH-GPD superfamily base excision DNA repair protein CQJ30_11205 PF10576 Iron-sulfur binding domain of endonuclease III CQJ30_11210 PF07261 Replication initiation and membrane attachment CQJ30_11215 PF00152 tRNA synthetases class II (D, K and N) CQJ30_11215 PF01336 OB-fold nucleic acid binding domain CQJ30_11220 PF00155 Aminotransferase class I and II CQJ30_11230 PF14084 CQJ30_11230 CQJ30_11235 PF00929 Exonuclease CQJ30_11235 PF13307 Helicase C-terminal domain CQJ30_11240 PF02261 Aspartate decarboxylase CQJ30_11245 PF02569 Pantoate-beta-alanine ligase CQJ30_11250 PF02548 Ketopantoate hydroxymethyltransferase CQJ30_11255 PF02237 Biotin protein ligase C terminal domain CQJ30_11255 PF03099 Biotin/lipoate A/B protein ligase family CQJ30_11255 PF08279 HTH domain CQJ30_11260 PF01743 Poly A polymerase head domain CQJ30_11260 PF12627 Probable RNA and SrmB- binding site of polymerase A CQJ30_11260 PF13735 tRNA nucleotidyltransferase domain 2 putative CQJ30_11265 PF00534 Glycosyl transferases group 1 CQJ30_11265 PF13439 Glycosyltransferase Family 4 CQJ30_11270 PF02142 MGS-like domain CQJ30_11275 PF01113 Dihydrodipicolinate reductase, N-terminus CQJ30_11275 PF05173 Dihydrodipicolinate reductase, C-terminus CQJ30_11280 PF03819 MazG nucleotide pyrophosphohydrolase domain CQJ30_11285 PF02588 CQJ30_11285 CQJ30_11285 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) CQJ30_11290 PF04298 CQJ30_11290 CQJ30_11295 PF09577 CQJ30_11295 CQJ30_11300 PF07187 CQJ30_11300 CQJ30_11305 PF00032 Cytochrome b(C-terminal)/b6/petD CQJ30_11305 PF13442 Cytochrome C oxidase, cbb3-type, subunit III CQJ30_11310 PF00033 Cytochrome b(N-terminal)/b6/petB CQJ30_11315 PF00355 Rieske [2Fe-2S] domain CQJ30_11320 PF10673 CQJ30_11320 CQJ30_11325 PF08858 IDEAL domain CQJ30_11325 PF08864 UPF0302 domain CQJ30_11330 PF13181 Tetratricopeptide repeat CQJ30_11330 PF13432 Tetratricopeptide repeat CQJ30_11330 PF14559 Tetratricopeptide repeat CQJ30_11340 PF01739 CheR methyltransferase, SAM binding domain CQJ30_11340 PF03705 CheR methyltransferase, all-alpha domain CQJ30_11345 PF00334 Nucleoside diphosphate kinase CQJ30_11350 PF00348 Polyprenyl synthetase CQJ30_11355 PF01209 ubiE/COQ5 methyltransferase family CQJ30_11360 PF07307 CQJ30_11360 CQJ30_11365 PF02081 Tryptophan RNA-binding attenuator protein CQJ30_11370 PF01227 GTP cyclohydrolase I CQJ30_11375 PF00216 Bacterial DNA-binding protein CQJ30_11380 PF09547 CQJ30_11380 CQJ30_11390 PF10966 CQJ30_11390 CQJ30_11395 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus CQJ30_11395 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus CQJ30_11400 PF01926 50S ribosome-binding GTPase CQJ30_11400 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal CQJ30_11410 PF14045 CQJ30_11410 CQJ30_11420 PF00575 S1 RNA binding domain CQJ30_11425 PF01553 Acyltransferase CQJ30_11430 PF02224 Cytidylate kinase CQJ30_11435 PF17313 CQJ30_11435 CQJ30_11440 PF07238 PilZ domain CQJ30_11440 PF12945 Flagellar protein YcgR CQJ30_11445 PF03413 Peptidase propeptide and YPEB domain CQJ30_11445 PF14620 CQJ30_11445 CQJ30_11450 PF01471 Putative peptidoglycan binding domain CQJ30_11450 PF07486 Cell Wall Hydrolase CQJ30_11460 PF13367 CQJ30_11460 CQJ30_11465 PF00710 Asparaginase CQJ30_11470 PF13738 Pyridine nucleotide-disulphide oxidoreductase CQJ30_11480 PF03625 Domain of unknown function DUF302 CQJ30_11485 PF07731 Multicopper oxidase CQJ30_11485 PF07732 Multicopper oxidase CQJ30_11490 PF03860 Domain of Unknown Function (DUF326) CQJ30_11495 PF05598 CQJ30_11495 CQJ30_11495 PF13586 CQJ30_11495 CQJ30_11520 PF09851 CQJ30_11520 CQJ30_11525 PF00512 His Kinase A (phospho-acceptor) domain CQJ30_11525 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CQJ30_11530 PF00072 Response regulator receiver domain CQJ30_11530 PF00486 Transcriptional regulatory protein, C terminal CQJ30_11545 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase CQJ30_11545 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain CQJ30_11550 PF05389 Negative regulator of genetic competence (MecA) CQJ30_11555 PF10864 CQJ30_11555 CQJ30_11565 PF02517 CAAX protease self-immunity CQJ30_11570 PF00270 DEAD/DEAH box helicase CQJ30_11570 PF00271 Helicase conserved C-terminal domain CQJ30_11575 PF14493 CQJ30_11575 CQJ30_11580 PF13370 4Fe-4S single cluster domain CQJ30_11585 PF12822 Protein of unknown function (DUF3816) CQJ30_11590 PF01476 LysM domain CQJ30_11590 PF01551 Peptidase family M23 CQJ30_11595 PF00512 His Kinase A (phospho-acceptor) domain CQJ30_11595 PF00672 HAMP domain CQJ30_11595 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CQJ30_11600 PF00072 Response regulator receiver domain CQJ30_11600 PF00486 Transcriptional regulatory protein, C terminal CQJ30_11605 PF01578 CQJ30_11605 CQJ30_11610 PF05140 CQJ30_11610 CQJ30_11615 PF00578 AhpC/TSA family CQJ30_11620 PF00849 RNA pseudouridylate synthase CQJ30_11620 PF01479 S4 domain CQJ30_11625 PF07670 Nucleoside recognition CQJ30_11630 PF07670 Nucleoside recognition CQJ30_11635 PF00768 D-alanyl-D-alanine carboxypeptidase CQJ30_11640 PF04079 Putative transcriptional regulators (Ypuh-like) CQJ30_11645 PF02616 ScpA/B protein CQJ30_11650 PF00583 Acetyltransferase (GNAT) family CQJ30_11655 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain CQJ30_11655 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain CQJ30_11660 PF03323 CQJ30_11660 CQJ30_11665 PF13782 CQJ30_11665 CQJ30_11670 PF12164 Stage V sporulation protein AA CQJ30_11675 PF04539 Sigma-70 region 3 CQJ30_11675 PF04542 Sigma-70 region 2 CQJ30_11675 PF04545 Sigma-70, region 4 CQJ30_11680 PF13581 Histidine kinase-like ATPase domain CQJ30_11685 PF01740 STAS domain CQJ30_11690 PF00768 D-alanyl-D-alanine carboxypeptidase CQJ30_11690 PF07943 Penicillin-binding protein 5, C-terminal domain CQJ30_11695 PF00591 Glycosyl transferase family, a/b domain CQJ30_11695 PF02885 Glycosyl transferase family, helical bundle domain CQJ30_11695 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain CQJ30_11700 PF01676 Metalloenzyme superfamily CQJ30_11705 PF00589 Phage integrase family CQJ30_11705 PF02899 Phage integrase, N-terminal SAM-like domain CQJ30_11710 PF14004 CQJ30_11710 CQJ30_11715 PF01475 Ferric uptake regulator family CQJ30_11720 PF01944 CQJ30_11720 CQJ30_11730 PF00293 NUDIX domain CQJ30_11735 PF13072 CQJ30_11735 CQJ30_11740 PF00248 Aldo/keto reductase family CQJ30_11745 PF13025 CQJ30_11745 CQJ30_11750 PF12146 Putative lysophospholipase CQJ30_11760 PF01385 CQJ30_11760 CQJ30_11760 PF07282 CQJ30_11760 CQJ30_11765 PF08863 CQJ30_11765 CQJ30_11770 PF00817 impB/mucB/samB family CQJ30_11770 PF11798 IMS family HHH motif CQJ30_11770 PF11799 impB/mucB/samB family C-terminal domain CQJ30_11775 PF01207 Dihydrouridine synthase (Dus) CQJ30_11780 PF00155 Aminotransferase class I and II CQJ30_11785 PF01502 Phosphoribosyl-AMP cyclohydrolase CQJ30_11785 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase CQJ30_11790 PF00977 Histidine biosynthesis protein CQJ30_11795 PF00977 Histidine biosynthesis protein CQJ30_11800 PF00117 Glutamine amidotransferase class-I CQJ30_11805 PF00475 Imidazoleglycerol-phosphate dehydratase CQJ30_11810 PF00815 Histidinol dehydrogenase CQJ30_11815 PF01634 ATP phosphoribosyltransferase CQJ30_11820 PF13393 Histidyl-tRNA synthetase CQJ30_11825 PF02811 PHP domain CQJ30_11830 PF00106 short chain dehydrogenase CQJ30_11835 PF00753 Metallo-beta-lactamase superfamily CQJ30_11840 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain CQJ30_11840 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain CQJ30_11845 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain CQJ30_11845 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase CQJ30_11850 PF00817 impB/mucB/samB family CQJ30_11850 PF11798 IMS family HHH motif CQJ30_11850 PF11799 impB/mucB/samB family C-terminal domain CQJ30_11855 PF01584 CheW-like domain CQJ30_11860 PF01546 Peptidase family M20/M25/M40 CQJ30_11860 PF07687 Peptidase dimerisation domain CQJ30_11865 PF01039 Carboxyl transferase domain CQJ30_11870 PF13669 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CQJ30_11875 PF03734 L,D-transpeptidase catalytic domain CQJ30_11880 PF06491 Disulphide isomerase CQJ30_11885 PF03308 ArgK protein CQJ30_11890 PF01642 Methylmalonyl-CoA mutase CQJ30_11890 PF02310 B12 binding domain CQJ30_11895 PF01642 Methylmalonyl-CoA mutase CQJ30_11900 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) CQJ30_11900 PF00364 Biotin-requiring enzyme CQJ30_11900 PF02817 e3 binding domain CQJ30_11905 PF02779 Transketolase, pyrimidine binding domain CQJ30_11905 PF02780 Transketolase, C-terminal domain CQJ30_11910 PF00676 Dehydrogenase E1 component CQJ30_11915 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CQJ30_11915 PF07992 Pyridine nucleotide-disulphide oxidoreductase CQJ30_11920 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase CQJ30_11920 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain CQJ30_11930 PF00158 Sigma-54 interaction domain CQJ30_11930 PF00989 PAS fold CQJ30_11930 PF02954 Bacterial regulatory protein, Fis family CQJ30_11935 PF11118 CQJ30_11935 CQJ30_11940 PF03009 Glycerophosphoryl diester phosphodiesterase family CQJ30_11945 PF00072 Response regulator receiver domain CQJ30_11945 PF08769 Sporulation initiation factor Spo0A C terminal CQJ30_11950 PF05580 CQJ30_11950 CQJ30_11950 PF13180 PDZ domain CQJ30_11955 PF13476 AAA domain CQJ30_11960 PF01316 Arginine repressor, DNA binding domain CQJ30_11960 PF02863 Arginine repressor, C-terminal domain CQJ30_11965 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CQJ30_11965 PF00672 HAMP domain CQJ30_11965 PF02743 Cache domain CQJ30_11970 PF00696 Amino acid kinase family CQJ30_11975 PF13520 Amino acid permease CQJ30_11980 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain CQJ30_11980 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain CQJ30_11985 PF02274 Amidinotransferase CQJ30_11990 PF00027 Cyclic nucleotide-binding domain CQJ30_11990 PF13545 Crp-like helix-turn-helix domain CQJ30_11995 PF01479 S4 domain CQJ30_11995 PF01728 FtsJ-like methyltransferase CQJ30_12000 PF02779 Transketolase, pyrimidine binding domain CQJ30_12000 PF02780 Transketolase, C-terminal domain CQJ30_12000 PF13292 1-deoxy-D-xylulose-5-phosphate synthase CQJ30_12005 PF00348 Polyprenyl synthetase CQJ30_12010 PF02609 Exonuclease VII small subunit CQJ30_12015 PF02601 CQJ30_12015 CQJ30_12015 PF13742 CQJ30_12015 CQJ30_12020 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain CQJ30_12020 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain CQJ30_12025 PF01029 NusB family CQJ30_12030 PF03780 CQJ30_12030 CQJ30_12035 PF00289 Carbamoyl-phosphate synthase L chain, N-terminal domain CQJ30_12035 PF02785 Biotin carboxylase C-terminal domain CQJ30_12035 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain CQJ30_12040 PF00364 Biotin-requiring enzyme CQJ30_12045 PF12685 SpoIIIAH-like protein CQJ30_12055 PF09581 CQJ30_12055 CQJ30_12060 PF09546 CQJ30_12060 CQJ30_12065 PF06686 CQJ30_12065 CQJ30_12070 PF06686 CQJ30_12070 CQJ30_12075 PF09548 CQJ30_12075 CQJ30_12085 PF01132 Elongation factor P (EF-P) OB domain CQJ30_12085 PF08207 Elongation factor P (EF-P) KOW-like domain CQJ30_12085 PF09285 Elongation factor P, C-terminal CQJ30_12090 PF00557 Metallopeptidase family M24 CQJ30_12090 PF01321 Creatinase/Prolidase N-terminal domain CQJ30_12095 PF11085 CQJ30_12095 CQJ30_12105 PF01734 Patatin-like phospholipase CQJ30_12110 PF00317 Ribonucleotide reductase, all-alpha domain CQJ30_12110 PF02867 Ribonucleotide reductase, barrel domain CQJ30_12115 PF00581 Rhodanese-like domain CQJ30_12120 PF02347 Glycine cleavage system P-protein CQJ30_12125 PF02347 Glycine cleavage system P-protein CQJ30_12130 PF01571 Aminomethyltransferase folate-binding domain CQJ30_12130 PF08669 Glycine cleavage T-protein C-terminal barrel domain CQJ30_12135 PF00176 SNF2 family N-terminal domain CQJ30_12135 PF00271 Helicase conserved C-terminal domain CQJ30_12140 PF11079 CQJ30_12140 CQJ30_12145 PF10958 CQJ30_12145 CQJ30_12150 PF11117 CQJ30_12150 CQJ30_12155 PF12840 Helix-turn-helix domain CQJ30_12160 PF00437 Type II/IV secretion system protein CQJ30_12165 PF00482 Type II secretion system (T2SS), protein F CQJ30_12170 PF07963 Prokaryotic N-terminal methylation motif CQJ30_12175 PF07963 Prokaryotic N-terminal methylation motif CQJ30_12185 PF07963 Prokaryotic N-terminal methylation motif CQJ30_12185 PF15980 CQJ30_12185 CQJ30_12190 PF14173 CQJ30_12190 CQJ30_12195 PF14038 CQJ30_12195 CQJ30_12205 PF00246 Zinc carboxypeptidase CQJ30_12205 PF01476 LysM domain CQJ30_12210 PF00480 ROK family CQJ30_12215 PF06014 Bacterial protein of unknown function (DUF910) CQJ30_12220 PF03323 CQJ30_12220 CQJ30_12230 PF01694 Rhomboid family CQJ30_12240 PF01812 5-formyltetrahydrofolate cyclo-ligase family CQJ30_12245 PF00471 Ribosomal protein L33 CQJ30_12265 PF00905 Penicillin binding protein transpeptidase domain CQJ30_12265 PF03717 Penicillin-binding Protein dimerisation domain CQJ30_12270 PF07690 Major Facilitator Superfamily CQJ30_12275 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain CQJ30_12275 PF02777 Iron/manganese superoxide dismutases, C-terminal domain CQJ30_12280 PF04306 CQJ30_12280 CQJ30_12290 PF06691 CQJ30_12290 CQJ30_12300 PF04551 GcpE protein CQJ30_12310 PF01425 Amidase CQJ30_12315 PF01475 Ferric uptake regulator family CQJ30_12320 PF00950 CQJ30_12320 CQJ30_12325 PF00005 ABC transporter CQJ30_12330 PF11116 CQJ30_12330 CQJ30_12335 PF01261 Xylose isomerase-like TIM barrel CQJ30_12340 PF00270 DEAD/DEAH box helicase CQJ30_12340 PF00271 Helicase conserved C-terminal domain CQJ30_12345 PF14181 CQJ30_12345 CQJ30_12350 PF02401 LytB protein CQJ30_12355 PF01784 NIF3 (NGG1p interacting factor 3) CQJ30_12360 PF04816 Family of unknown function (DUF633) CQJ30_12365 PF13442 Cytochrome C oxidase, cbb3-type, subunit III CQJ30_12370 PF00140 Sigma-70 factor, region 1 CQJ30_12370 PF03979 Sigma-70 factor, region 1 CQJ30_12370 PF04539 Sigma-70 region 3 CQJ30_12370 PF04542 Sigma-70 region 2 CQJ30_12370 PF04545 Sigma-70, region 4 CQJ30_12375 PF01807 CHC2 zinc finger CQJ30_12375 PF08275 DNA primase catalytic core, N-terminal domain CQJ30_12375 PF10410 DnaB-helicase binding domain of primase CQJ30_12375 PF13155 Toprim-like CQJ30_12380 PF03618 CQJ30_12380 CQJ30_12385 PF00571 CBS domain CQJ30_12385 PF08279 HTH domain CQJ30_12390 PF02092 CQJ30_12390 CQJ30_12390 PF05746 DALR anticodon binding domain CQJ30_12395 PF02091 Glycyl-tRNA synthetase alpha subunit CQJ30_12400 PF02565 Recombination protein O C terminal CQJ30_12400 PF11967 Recombination protein O N terminal CQJ30_12405 PF14006 CQJ30_12405 CQJ30_12410 PF01926 50S ribosome-binding GTPase CQJ30_12410 PF07650 KH domain CQJ30_12415 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region CQJ30_12420 PF01219 Prokaryotic diacylglycerol kinase CQJ30_12425 PF02130 Uncharacterized protein family UPF0054 CQJ30_12430 PF01966 HD domain CQJ30_12430 PF07697 CQJ30_12430 CQJ30_12430 PF07698 CQJ30_12430 CQJ30_12435 PF02562 PhoH-like protein CQJ30_12440 PF06898 CQJ30_12440 CQJ30_12445 PF07873 YabP family CQJ30_12455 PF12127 CQJ30_12455 CQJ30_12460 PF01957 NfeD-like C-terminal, partner-binding CQJ30_12460 PF01972 Serine dehydrogenase proteinase CQJ30_12465 PF09424 Yqey-like protein CQJ30_12470 PF01165 Ribosomal protein S21 CQJ30_12475 PF02690 CQJ30_12475 CQJ30_12480 PF01791 DeoC/LacD family aldolase CQJ30_12485 PF00919 Uncharacterized protein family UPF0004 CQJ30_12485 PF04055 Radical SAM superfamily CQJ30_12490 PF04452 RNA methyltransferase CQJ30_12495 PF06325 Ribosomal protein L11 methyltransferase (PrmA) CQJ30_12500 PF00226 DnaJ domain CQJ30_12500 PF00684 DnaJ central domain CQJ30_12500 PF01556 DnaJ C terminal domain CQJ30_12505 PF00012 Hsp70 protein CQJ30_12510 PF01025 GrpE CQJ30_12515 PF01628 HrcA protein C terminal domain CQJ30_12520 PF04055 Radical SAM superfamily CQJ30_12520 PF06969 HemN C-terminal domain CQJ30_12525 PF00009 Elongation factor Tu GTP binding domain CQJ30_12525 PF00679 Elongation factor G C-terminus CQJ30_12525 PF03144 Elongation factor Tu domain 2 CQJ30_12525 PF06421 GTP-binding protein LepA C-terminus CQJ30_12530 PF12438 CQJ30_12530 CQJ30_12535 PF03418 Germination protease CQJ30_12540 PF01649 Ribosomal protein S20 CQJ30_12545 PF06144 DNA polymerase III, delta subunit CQJ30_12550 PF14141 CQJ30_12550 CQJ30_12555 PF00753 Metallo-beta-lactamase superfamily CQJ30_12555 PF03772 CQJ30_12555 CQJ30_12555 PF13567 CQJ30_12555 CQJ30_12560 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region CQJ30_12565 PF01385 CQJ30_12565 CQJ30_12565 PF07282 CQJ30_12565 CQJ30_12565 PF12323 CQJ30_12565 CQJ30_12570 PF10531 SLBB domain CQJ30_12570 PF12836 Helix-hairpin-helix motif CQJ30_12575 PF03807 NADP oxidoreductase coenzyme F420-dependent CQJ30_12575 PF14748 Pyrroline-5-carboxylate reductase dimerisation CQJ30_12580 PF13649 Methyltransferase domain CQJ30_12585 PF02410 Oligomerisation domain CQJ30_12590 PF01966 HD domain CQJ30_12595 PF01467 Cytidylyltransferase CQJ30_12600 PF01985 CRS1 / YhbY (CRM) domain CQJ30_12605 PF01926 50S ribosome-binding GTPase CQJ30_12610 PF00702 haloacid dehalogenase-like hydrolase CQJ30_12615 PF01609 Transposase DDE domain CQJ30_12615 PF05598 CQJ30_12615 CQJ30_12620 PF08970 Sporulation inhibitor A CQJ30_12625 PF02666 CQJ30_12625 CQJ30_12630 PF01066 CDP-alcohol phosphatidyltransferase CQJ30_12635 PF04542 Sigma-70 region 2 CQJ30_12635 PF04545 Sigma-70, region 4 CQJ30_12640 PF14143 CQJ30_12640 CQJ30_12650 PF00072 Response regulator receiver domain CQJ30_12650 PF00486 Transcriptional regulatory protein, C terminal CQJ30_12655 PF01048 Phosphorylase superfamily CQJ30_12660 PF07423 CQJ30_12660 CQJ30_12665 PF00905 Penicillin binding protein transpeptidase domain CQJ30_12665 PF03717 Penicillin-binding Protein dimerisation domain CQJ30_12670 PF01272 Transcription elongation factor, GreA/GreB, C-term CQJ30_12670 PF03449 Transcription elongation factor, N-terminal CQJ30_12675 PF00485 Phosphoribulokinase / Uridine kinase family CQJ30_12680 PF01136 CQJ30_12680 CQJ30_12680 PF16325 CQJ30_12680 CQJ30_12685 PF01136 CQJ30_12685 CQJ30_12690 PF01596 O-methyltransferase CQJ30_12695 PF02618 YceG-like family CQJ30_12700 PF13701 CQJ30_12700 CQJ30_12705 PF06949 CQJ30_12705 CQJ30_12710 PF03652 Uncharacterised protein family (UPF0081) CQJ30_12715 PF06135 CQJ30_12715 CQJ30_12720 PF01411 tRNA synthetases class II (A) CQJ30_12720 PF02272 DHHA1 domain CQJ30_12720 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain CQJ30_12725 PF01594 CQJ30_12725 CQJ30_12735 PF13538 UvrD-like helicase C-terminal domain CQJ30_12735 PF13604 AAA domain CQJ30_12735 PF14490 Helix-hairpin-helix containing domain CQJ30_12740 PF03054 tRNA methyl transferase CQJ30_12745 PF00266 Aminotransferase class-V CQJ30_12750 PF02082 Transcriptional regulator CQJ30_12755 PF02588 CQJ30_12755 CQJ30_12760 PF05496 Holliday junction DNA helicase ruvB N-terminus CQJ30_12760 PF12002 MgsA AAA+ ATPase C terminal CQJ30_12760 PF16193 CQJ30_12760 CQJ30_12770 PF00899 ThiF family CQJ30_12780 PF00152 tRNA synthetases class II (D, K and N) CQJ30_12780 PF01336 OB-fold nucleic acid binding domain CQJ30_12780 PF02938 GAD domain CQJ30_12785 PF03129 Anticodon binding domain CQJ30_12785 PF13393 Histidyl-tRNA synthetase CQJ30_12790 PF02580 D-Tyr-tRNA(Tyr) deacylase CQJ30_12795 PF02824 TGS domain CQJ30_12795 PF04607 Region found in RelA / SpoT proteins CQJ30_12795 PF13291 ACT domain CQJ30_12795 PF13328 HD domain CQJ30_12800 PF00156 Phosphoribosyl transferase domain CQJ30_12805 PF01368 DHH family CQJ30_12805 PF02272 DHHA1 domain CQJ30_12805 PF10141 CQJ30_12805 CQJ30_12810 PF02355 Protein export membrane protein CQJ30_12810 PF07549 SecD/SecF GG Motif CQJ30_12815 PF13797 CQJ30_12815 CQJ30_12820 PF01943 CQJ30_12820 CQJ30_12820 PF14667 Polysaccharide biosynthesis C-terminal domain CQJ30_12825 PF04239 Protein of unknown function (DUF421) CQJ30_12830 PF12670 CQJ30_12830 CQJ30_12835 PF02699 Preprotein translocase subunit CQJ30_12840 PF01702 Queuine tRNA-ribosyltransferase CQJ30_12845 PF02547 Queuosine biosynthesis protein CQJ30_12850 PF11146 CQJ30_12850 CQJ30_12855 PF05491 Holliday junction DNA helicase ruvB C-terminus CQJ30_12855 PF05496 Holliday junction DNA helicase ruvB N-terminus CQJ30_12860 PF01330 RuvA N terminal domain CQJ30_12860 PF07499 RuvA, C-terminal domain CQJ30_12860 PF14520 Helix-hairpin-helix domain CQJ30_12865 PF00171 Aldehyde dehydrogenase family CQJ30_12865 PF00465 Iron-containing alcohol dehydrogenase CQJ30_12875 PF02603 HPr Serine kinase N terminus CQJ30_12875 PF07475 HPr Serine kinase C-terminal domain CQJ30_12880 PF01609 Transposase DDE domain CQJ30_12880 PF05598 CQJ30_12880 CQJ30_12880 PF13808 CQJ30_12880 CQJ30_12885 PF02603 HPr Serine kinase N terminus CQJ30_12890 PF00107 Zinc-binding dehydrogenase CQJ30_12890 PF08240 Alcohol dehydrogenase GroES-like domain CQJ30_12895 PF13561 Enoyl-(Acyl carrier protein) reductase CQJ30_12900 PF00465 Iron-containing alcohol dehydrogenase CQJ30_12905 PF08955 BofC C-terminal domain CQJ30_12905 PF08977 Bypass of Forespore C, N terminal CQJ30_12910 PF02540 NAD synthase CQJ30_12920 PF00326 Prolyl oligopeptidase family CQJ30_12925 PF00872 CQJ30_12925 CQJ30_12930 PF01476 LysM domain CQJ30_12940 PF01018 GTP1/OBG CQJ30_12940 PF01926 50S ribosome-binding GTPase CQJ30_12940 PF09269 Domain of unknown function (DUF1967) CQJ30_12945 PF14682 Sporulation initiation phospho-transferase B, C-terminal CQJ30_12945 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain CQJ30_12950 PF01016 Ribosomal L27 protein CQJ30_12955 PF04327 Protein of unknown function (DUF464) CQJ30_12960 PF00829 Ribosomal prokaryotic L21 protein CQJ30_12965 PF10150 Ribonuclease E/G family CQJ30_12975 PF01551 Peptidase family M23 CQJ30_12985 PF13614 AAA domain CQJ30_12990 PF03775 Septum formation inhibitor MinC, C-terminal domain CQJ30_12995 PF04093 CQJ30_12995 CQJ30_13000 PF04085 rod shape-determining protein MreC CQJ30_13005 PF06723 MreB/Mbl protein CQJ30_13010 PF00633 Helix-hairpin-helix motif CQJ30_13010 PF04002 RadC-like JAB domain CQJ30_13015 PF02545 Maf-like protein CQJ30_13025 PF00005 ABC transporter CQJ30_13030 PF00497 Bacterial extracellular solute-binding proteins, family 3 CQJ30_13030 PF00528 Binding-protein-dependent transport system inner membrane component CQJ30_13035 PF01478 Type IV leader peptidase family CQJ30_13035 PF06750 CQJ30_13035 CQJ30_13045 PF05137 CQJ30_13045 CQJ30_13050 PF11104 Type IV pilus assembly protein PilM; CQJ30_13055 PF07963 Prokaryotic N-terminal methylation motif CQJ30_13060 PF00482 Type II secretion system (T2SS), protein F CQJ30_13065 PF00437 Type II/IV secretion system protein CQJ30_13070 PF00437 Type II/IV secretion system protein CQJ30_13070 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain CQJ30_13075 PF04294 CQJ30_13075 CQJ30_13075 PF07501 G5 domain CQJ30_13080 PF07963 Prokaryotic N-terminal methylation motif CQJ30_13085 PF07963 Prokaryotic N-terminal methylation motif CQJ30_13095 PF01385 CQJ30_13095 CQJ30_13095 PF07282 CQJ30_13095 CQJ30_13110 PF01797 Transposase IS200 like CQJ30_13115 PF01609 Transposase DDE domain CQJ30_13115 PF05598 CQJ30_13115 CQJ30_13120 PF00990 GGDEF domain CQJ30_13120 PF13185 GAF domain CQJ30_13125 PF08245 Mur ligase middle domain CQJ30_13140 PF00133 tRNA synthetases class I (I, L, M and V) CQJ30_13140 PF08264 Anticodon-binding domain of tRNA CQJ30_13140 PF10458 Valyl tRNA synthetase tRNA binding arm CQJ30_13155 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CQJ30_13160 PF13241 Putative NAD(P)-binding CQJ30_13160 PF14824 Sirohaem biosynthesis protein central CQJ30_13165 PF01636 Phosphotransferase enzyme family CQJ30_13170 PF01476 LysM domain CQJ30_13175 PF00202 Aminotransferase class-III CQJ30_13180 PF00490 Delta-aminolevulinic acid dehydratase CQJ30_13185 PF02602 Uroporphyrinogen-III synthase HemD CQJ30_13190 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain CQJ30_13190 PF03900 Porphobilinogen deaminase, C-terminal domain CQJ30_13195 PF01578 CQJ30_13195 CQJ30_13200 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain CQJ30_13200 PF01488 Shikimate / quinate 5-dehydrogenase CQJ30_13200 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain CQJ30_13210 PF01926 50S ribosome-binding GTPase CQJ30_13215 PF00004 ATPase family associated with various cellular activities (AAA) CQJ30_13215 PF02190 ATP-dependent protease La (LON) domain CQJ30_13215 PF05362 Lon protease (S16) C-terminal proteolytic domain CQJ30_13220 PF00004 ATPase family associated with various cellular activities (AAA) CQJ30_13220 PF05362 Lon protease (S16) C-terminal proteolytic domain CQJ30_13225 PF06689 ClpX C4-type zinc finger CQJ30_13225 PF07724 AAA domain (Cdc48 subfamily) CQJ30_13225 PF10431 C-terminal, D2-small domain, of ClpB protein CQJ30_13230 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase CQJ30_13230 PF05697 Bacterial trigger factor protein (TF) CQJ30_13230 PF05698 Bacterial trigger factor protein (TF) C-terminus CQJ30_13235 PF14559 Tetratricopeptide repeat CQJ30_13250 PF12850 Calcineurin-like phosphoesterase superfamily domain CQJ30_13255 PF01725 Ham1 family CQJ30_13260 PF10646 CQJ30_13260 CQJ30_13265 PF01177 Asp/Glu/Hydantoin racemase CQJ30_13270 PF01047 MarR family CQJ30_13275 PF01385 CQJ30_13275 CQJ30_13275 PF07282 CQJ30_13275 CQJ30_13280 PF00196 Bacterial regulatory proteins, luxR family CQJ30_13285 PF03061 Thioesterase superfamily CQJ30_13290 PF13085 2Fe-2S iron-sulfur cluster binding domain CQJ30_13290 PF13183 4Fe-4S dicluster domain CQJ30_13295 PF00890 FAD binding domain CQJ30_13295 PF02910 Fumarate reductase flavoprotein C-term CQJ30_13300 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit CQJ30_13305 PF10702 Protein of unknown function (DUF2507) CQJ30_13310 PF01541 GIY-YIG catalytic domain CQJ30_13310 PF02151 UvrB/uvrC motif CQJ30_13310 PF08459 UvrC Helix-hairpin-helix N-terminal CQJ30_13315 PF00085 Thioredoxin CQJ30_13320 PF00766 Electron transfer flavoprotein FAD-binding domain CQJ30_13320 PF01012 Electron transfer flavoprotein domain CQJ30_13325 PF01012 Electron transfer flavoprotein domain CQJ30_13330 PF00378 Enoyl-CoA hydratase/isomerase family CQJ30_13335 PF00440 Bacterial regulatory proteins, tetR family CQJ30_13335 PF08359 YsiA-like protein, C-terminal region CQJ30_13340 PF00501 AMP-binding enzyme CQJ30_13340 PF13193 AMP-binding enzyme C-terminal domain CQJ30_13345 PF03994 CQJ30_13345 CQJ30_13350 PF00488 MutS domain V CQJ30_13350 PF01713 Smr domain CQJ30_13355 PF02811 PHP domain CQJ30_13355 PF14520 Helix-hairpin-helix domain CQJ30_13355 PF14716 Helix-hairpin-helix domain CQJ30_13355 PF14791 DNA polymerase beta thumb CQJ30_13360 PF02674 CQJ30_13360 CQJ30_13365 PF05164 Cell division protein ZapA CQJ30_13370 PF01588 Putative tRNA binding domain CQJ30_13370 PF03147 Ferredoxin-fold anticodon binding domain CQJ30_13370 PF03483 B3/4 domain CQJ30_13370 PF03484 tRNA synthetase B5 domain CQJ30_13375 PF01409 tRNA synthetases class II core domain (F) CQJ30_13375 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain CQJ30_13380 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CQJ30_13380 PF11563 Protoglobin CQJ30_13380 PF13682 Chemoreceptor zinc-binding domain CQJ30_13385 PF00588 SpoU rRNA Methylase family CQJ30_13385 PF08032 RNA 2'-O ribose methyltransferase substrate binding CQJ30_13390 PF14098 CQJ30_13390 CQJ30_13395 PF00753 Metallo-beta-lactamase superfamily CQJ30_13400 PF05343 M42 glutamyl aminopeptidase CQJ30_13405 PF00692 dUTPase CQJ30_13415 PF09335 CQJ30_13415 CQJ30_13420 PF00453 Ribosomal protein L20 CQJ30_13425 PF01632 Ribosomal protein L35 CQJ30_13430 PF00707 Translation initiation factor IF-3, C-terminal domain CQJ30_13430 PF05198 Translation initiation factor IF-3, N-terminal domain CQJ30_13435 PF01609 Transposase DDE domain CQJ30_13435 PF05598 CQJ30_13435 CQJ30_13435 PF13808 CQJ30_13435 CQJ30_13440 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CQJ30_13440 PF02824 TGS domain CQJ30_13440 PF03129 Anticodon binding domain CQJ30_13440 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain CQJ30_13445 PF08812 CQJ30_13445 CQJ30_13450 PF01695 IstB-like ATP binding protein CQJ30_13450 PF07319 Primosomal protein DnaI N-terminus CQJ30_13455 PF07261 Replication initiation and membrane attachment CQJ30_13460 PF03477 ATP cone domain CQJ30_13470 PF02675 S-adenosylmethionine decarboxylase CQJ30_13475 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain CQJ30_13475 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain CQJ30_13480 PF01121 Dephospho-CoA kinase CQJ30_13485 PF02659 CQJ30_13485 CQJ30_13490 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain CQJ30_13490 PF06827 Zinc finger found in FPG and IleRS CQJ30_13490 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain CQJ30_13495 PF00476 DNA polymerase family A CQJ30_13495 PF01367 5'-3' exonuclease, C-terminal SAM fold CQJ30_13495 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain CQJ30_13500 PF01145 SPFH domain / Band 7 family CQJ30_13505 PF01145 SPFH domain / Band 7 family CQJ30_13510 PF00512 His Kinase A (phospho-acceptor) domain CQJ30_13510 PF00989 PAS fold CQJ30_13510 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CQJ30_13510 PF16736 CQJ30_13510 CQJ30_13515 PF00072 Response regulator receiver domain CQJ30_13515 PF00486 Transcriptional regulatory protein, C terminal CQJ30_13520 PF00056 lactate/malate dehydrogenase, NAD binding domain CQJ30_13520 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain CQJ30_13525 PF00180 Isocitrate/isopropylmalate dehydrogenase CQJ30_13530 PF00285 Citrate synthase CQJ30_13535 PF01594 CQJ30_13535 CQJ30_13540 PF04186 CQJ30_13540 CQJ30_13545 PF00224 Pyruvate kinase, barrel domain CQJ30_13545 PF00391 PEP-utilising enzyme, mobile domain CQJ30_13545 PF02887 Pyruvate kinase, alpha/beta domain CQJ30_13550 PF00365 Phosphofructokinase CQJ30_13555 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit CQJ30_13560 PF01039 Carboxyl transferase domain CQJ30_13565 PF00392 Bacterial regulatory proteins, gntR family CQJ30_13570 PF00390 Malic enzyme, N-terminal domain CQJ30_13570 PF03949 Malic enzyme, NAD binding domain CQJ30_13575 PF02811 PHP domain CQJ30_13575 PF07733 Bacterial DNA polymerase III alpha subunit CQJ30_13575 PF14579 Helix-hairpin-helix motif CQJ30_13580 PF14034 CQJ30_13580 CQJ30_13590 PF01368 DHH family CQJ30_13590 PF02272 DHHA1 domain CQJ30_13595 PF03348 CQJ30_13595 CQJ30_13595 PF14007 CQJ30_13595 CQJ30_13600 PF00571 CBS domain CQJ30_13600 PF03061 Thioesterase superfamily CQJ30_13600 PF07085 DRTGG domain CQJ30_13600 PF13412 Winged helix-turn-helix DNA-binding CQJ30_13610 PF12784 CQJ30_13610 CQJ30_13615 PF13483 Beta-lactamase superfamily domain CQJ30_13620 PF00557 Metallopeptidase family M24 CQJ30_13620 PF01321 Creatinase/Prolidase N-terminal domain CQJ30_13625 PF00582 Universal stress protein family CQJ30_13630 PF01385 CQJ30_13630 CQJ30_13630 PF07282 CQJ30_13630 CQJ30_13635 PF12787 CQJ30_13635 CQJ30_13640 PF02056 Family 4 glycosyl hydrolase CQJ30_13640 PF11975 Family 4 glycosyl hydrolase C-terminal domain CQJ30_13645 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit CQJ30_13650 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CQJ30_13655 PF05913 Bacterial protein of unknown function (DUF871) CQJ30_13660 PF11687 CQJ30_13660 CQJ30_13665 PF11384 CQJ30_13665 CQJ30_13675 PF02378 Phosphotransferase system, EIIC CQJ30_13680 PF00480 ROK family CQJ30_13680 PF13412 Winged helix-turn-helix DNA-binding CQJ30_13685 PF00871 Acetokinase family CQJ30_13690 PF02384 N-6 DNA Methylase CQJ30_13695 PF08534 Redoxin CQJ30_13700 PF09579 CQJ30_13700 CQJ30_13705 PF11167 CQJ30_13705 CQJ30_13710 PF06271 CQJ30_13710 CQJ30_13715 PF01343 Peptidase family S49 CQJ30_13720 PF00269 Small, acid-soluble spore proteins, alpha/beta type CQJ30_13725 PF02568 Thiamine biosynthesis protein (ThiI) CQJ30_13725 PF02926 THUMP domain CQJ30_13730 PF00266 Aminotransferase class-V CQJ30_13735 PF06160 CQJ30_13735 CQJ30_13740 PF00440 Bacterial regulatory proteins, tetR family CQJ30_13745 PF13185 GAF domain CQJ30_13750 PF00990 GGDEF domain CQJ30_13760 PF00163 Ribosomal protein S4/S9 N-terminal domain CQJ30_13760 PF01479 S4 domain CQJ30_13765 PF00885 6,7-dimethyl-8-ribityllumazine synthase CQJ30_13770 PF00925 GTP cyclohydrolase II CQJ30_13770 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase CQJ30_13775 PF00677 Lumazine binding domain CQJ30_13780 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region CQJ30_13780 PF01872 RibD C-terminal domain CQJ30_13785 PF01381 Helix-turn-helix CQJ30_13795 PF11518 Protein of unknown function (DUF3221) CQJ30_13800 PF12698 ABC-2 family transporter protein CQJ30_13805 PF03613 CQJ30_13805 CQJ30_13810 PF03609 CQJ30_13810 CQJ30_13815 PF03610 PTS system fructose IIA component CQJ30_13815 PF03830 PTS system sorbose subfamily IIB component CQJ30_13820 PF06115 CQJ30_13820 CQJ30_13825 PF12746 GNAT acetyltransferase CQJ30_13830 PF00704 Glycosyl hydrolases family 18 CQJ30_13830 PF01476 LysM domain CQJ30_13835 PF05057 Putative serine esterase (DUF676) CQJ30_13845 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase CQJ30_13845 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain CQJ30_13855 PF12904 Putative collagen-binding domain of a collagenase CQJ30_13870 PF00596 Class II Aldolase and Adducin N-terminal domain CQJ30_13875 PF06134 L-rhamnose isomerase (RhaA) CQJ30_13880 PF00370 FGGY family of carbohydrate kinases, N-terminal domain CQJ30_13880 PF02782 FGGY family of carbohydrate kinases, C-terminal domain CQJ30_13885 PF02311 AraC-like ligand binding domain CQJ30_13885 PF12833 Helix-turn-helix domain CQJ30_13890 PF00005 ABC transporter CQJ30_13895 PF00005 ABC transporter CQJ30_13900 PF02361 Cobalt transport protein CQJ30_13910 PF01048 Phosphorylase superfamily CQJ30_13915 PF00579 tRNA synthetases class I (W and Y) CQJ30_13915 PF01479 S4 domain CQJ30_13925 PF01609 Transposase DDE domain CQJ30_13925 PF05598 CQJ30_13925 CQJ30_13925 PF13808 CQJ30_13925 CQJ30_13930 PF00905 Penicillin binding protein transpeptidase domain CQJ30_13930 PF00912 Transglycosylase CQJ30_13935 PF00501 AMP-binding enzyme CQJ30_13935 PF13193 AMP-binding enzyme C-terminal domain CQJ30_13945 PF00571 CBS domain CQJ30_13950 PF00850 Histone deacetylase domain CQJ30_13955 PF00691 OmpA family CQJ30_13955 PF13677 CQJ30_13955 CQJ30_13960 PF01618 CQJ30_13960 CQJ30_13965 PF00356 Bacterial regulatory proteins, lacI family CQJ30_13965 PF13377 Periplasmic binding protein-like domain CQJ30_13970 PF11104 Type IV pilus assembly protein PilM; CQJ30_13975 PF00355 Rieske [2Fe-2S] domain CQJ30_13975 PF01266 FAD dependent oxidoreductase CQJ30_13985 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CQJ30_13985 PF02770 Acyl-CoA dehydrogenase, middle domain CQJ30_13985 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CQJ30_13990 PF01575 MaoC like domain CQJ30_13995 PF13452 N-terminal half of MaoC dehydratase CQJ30_14000 PF13561 Enoyl-(Acyl carrier protein) reductase CQJ30_14005 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CQJ30_14005 PF02770 Acyl-CoA dehydrogenase, middle domain CQJ30_14005 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CQJ30_14010 PF00108 Thiolase, N-terminal domain CQJ30_14010 PF02803 Thiolase, C-terminal domain CQJ30_14020 PF00158 Sigma-54 interaction domain CQJ30_14020 PF13188 PAS domain CQJ30_14020 PF13426 PAS domain CQJ30_14025 PF11009 Protein of unknown function (DUF2847) CQJ30_14030 PF12732 CQJ30_14030 CQJ30_14035 PF06103 CQJ30_14035 CQJ30_14040 PF01225 Mur ligase family, catalytic domain CQJ30_14040 PF02875 Mur ligase family, glutamate ligase domain CQJ30_14040 PF08245 Mur ligase middle domain CQJ30_14045 PF01580 FtsK/SpoIIIE family CQJ30_14045 PF09397 Ftsk gamma domain CQJ30_14055 PF01588 Putative tRNA binding domain CQJ30_14055 PF14794 Domain of unknown function (DUF4479) CQJ30_14060 PF07285 CQJ30_14060 CQJ30_14065 PF00085 Thioredoxin CQJ30_14075 PF01931 Protein of unknown function DUF84 CQJ30_14080 PF05343 M42 glutamyl aminopeptidase CQJ30_14085 PF03413 Peptidase propeptide and YPEB domain CQJ30_14090 PF00753 Metallo-beta-lactamase superfamily CQJ30_14095 PF02588 CQJ30_14095 CQJ30_14095 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) CQJ30_14100 PF02390 Putative methyltransferase CQJ30_14105 PF14165 CQJ30_14105 CQJ30_14110 PF01636 Phosphotransferase enzyme family CQJ30_14120 PF13563 2'-5' RNA ligase superfamily CQJ30_14125 PF01063 Aminotransferase class IV CQJ30_14130 PF08220 DeoR-like helix-turn-helix domain CQJ30_14135 PF00849 RNA pseudouridylate synthase CQJ30_14135 PF01479 S4 domain CQJ30_14145 PF01943 CQJ30_14145 CQJ30_14145 PF14667 Polysaccharide biosynthesis C-terminal domain CQJ30_14150 PF03486 HI0933-like protein CQJ30_14155 PF10957 CQJ30_14155 CQJ30_14160 PF00581 Rhodanese-like domain CQJ30_14165 PF00133 tRNA synthetases class I (I, L, M and V) CQJ30_14165 PF08264 Anticodon-binding domain of tRNA CQJ30_14165 PF09334 tRNA synthetases class I (M) CQJ30_14165 PF13603 Leucyl-tRNA synthetase, Domain 2 CQJ30_14175 PF04055 Radical SAM superfamily CQJ30_14175 PF06968 Biotin and Thiamin Synthesis associated domain CQJ30_14180 PF02632 BioY family CQJ30_14190 PF07690 Major Facilitator Superfamily CQJ30_14195 PF10732 CQJ30_14195 CQJ30_14200 PF04055 Radical SAM superfamily CQJ30_14200 PF16199 CQJ30_14200 CQJ30_14205 PF06962 Putative rRNA methylase CQJ30_14210 PF00296 Luciferase-like monooxygenase CQJ30_14215 PF10776 CQJ30_14215 CQJ30_14220 PF00132 Bacterial transferase hexapeptide (six repeats) CQJ30_14225 PF00042 Globin CQJ30_14225 PF00175 Oxidoreductase NAD-binding domain CQJ30_14225 PF00970 Oxidoreductase FAD-binding domain CQJ30_14230 PF02082 Transcriptional regulator CQJ30_14235 PF00438 S-adenosylmethionine synthetase, N-terminal domain CQJ30_14235 PF02772 S-adenosylmethionine synthetase, central domain CQJ30_14235 PF02773 S-adenosylmethionine synthetase, C-terminal domain CQJ30_14240 PF01293 Phosphoenolpyruvate carboxykinase CQJ30_14245 PF08000 Bacterial PH domain CQJ30_14250 PF10763 Protein of unknown function (DUF2584) CQJ30_14255 PF13379 NMT1-like family CQJ30_14260 PF00005 ABC transporter CQJ30_14265 PF00528 Binding-protein-dependent transport system inner membrane component CQJ30_14270 PF00293 NUDIX domain CQJ30_14280 PF01063 Aminotransferase class IV CQJ30_14290 PF00210 Ferritin-like domain CQJ30_14295 PF01809 CQJ30_14295 CQJ30_14300 PF01297 Periplasmic solute binding protein family CQJ30_14305 PF00501 AMP-binding enzyme CQJ30_14305 PF13193 AMP-binding enzyme C-terminal domain CQJ30_14310 PF00378 Enoyl-CoA hydratase/isomerase family CQJ30_14315 PF01040 UbiA prenyltransferase family CQJ30_14320 PF00180 Isocitrate/isopropylmalate dehydrogenase CQJ30_14325 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CQJ30_14325 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CQJ30_14330 PF00108 Thiolase, N-terminal domain CQJ30_14330 PF02803 Thiolase, C-terminal domain CQJ30_14335 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CQJ30_14335 PF02770 Acyl-CoA dehydrogenase, middle domain CQJ30_14335 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CQJ30_14340 PF00378 Enoyl-CoA hydratase/isomerase family CQJ30_14345 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain CQJ30_14345 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain CQJ30_14350 PF01144 Coenzyme A transferase CQJ30_14355 PF01144 Coenzyme A transferase CQJ30_14360 PF00171 Aldehyde dehydrogenase family CQJ30_14365 PF00155 Aminotransferase class I and II CQJ30_14370 PF02423 Ornithine cyclodeaminase/mu-crystallin family CQJ30_14375 PF01266 FAD dependent oxidoreductase CQJ30_14380 PF05651 CQJ30_14380 CQJ30_14380 PF13556 PucR C-terminal helix-turn-helix domain CQJ30_14385 PF03358 NADPH-dependent FMN reductase CQJ30_14390 PF00474 Sodium:solute symporter family CQJ30_14515 PF00892 EamA-like transporter family CQJ30_14520 PF02308 CQJ30_14520 CQJ30_14525 PF01520 N-acetylmuramoyl-L-alanine amidase CQJ30_14525 PF05036 Sporulation related domain CQJ30_14535 PF00694 Aconitase C-terminal domain CQJ30_14540 PF00330 Aconitase family (aconitate hydratase) CQJ30_14545 PF00180 Isocitrate/isopropylmalate dehydrogenase CQJ30_14550 PF00682 HMGL-like CQJ30_14550 PF08502 LeuA allosteric (dimerisation) domain CQJ30_14555 PF01758 Sodium Bile acid symporter family CQJ30_14565 PF00205 Thiamine pyrophosphate enzyme, central domain CQJ30_14565 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CQJ30_14565 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CQJ30_14570 PF01842 ACT domain CQJ30_14570 PF10369 Small subunit of acetolactate synthase CQJ30_14575 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain CQJ30_14575 PF07991 Acetohydroxy acid isomeroreductase, catalytic domain CQJ30_14580 PF00291 Pyridoxal-phosphate dependent enzyme CQJ30_14585 PF05167 Uncharacterised ACR (DUF711) CQJ30_14590 PF13740 ACT domain CQJ30_14595 PF00122 E1-E2 ATPase CQJ30_14595 PF00689 Cation transporting ATPase, C-terminus CQJ30_14595 PF00690 Cation transporter/ATPase, N-terminus CQJ30_14595 PF00702 haloacid dehalogenase-like hydrolase CQJ30_14595 PF13246 Putative hydrolase of sodium-potassium ATPase alpha subunit CQJ30_14600 PF02080 TrkA-C domain CQJ30_14600 PF02254 TrkA-N domain CQJ30_14605 PF02080 TrkA-C domain CQJ30_14605 PF02254 TrkA-N domain CQJ30_14615 PF04328 CQJ30_14615 CQJ30_14625 PF05598 CQJ30_14625 CQJ30_14625 PF13586 CQJ30_14625 CQJ30_14635 PF12833 Helix-turn-helix domain CQJ30_14645 PF01381 Helix-turn-helix CQJ30_14650 PF06114 Domain of unknown function (DUF955) CQJ30_14660 PF01965 DJ-1/PfpI family CQJ30_14665 PF01869 BadF/BadG/BcrA/BcrD ATPase family CQJ30_14670 PF00206 Lyase CQJ30_14670 PF14698 Argininosuccinate lyase C-terminal CQJ30_14675 PF00528 Binding-protein-dependent transport system inner membrane component CQJ30_14680 PF00005 ABC transporter CQJ30_14680 PF08402 TOBE domain CQJ30_14685 PF13343 Bacterial extracellular solute-binding protein CQJ30_14690 PF00480 ROK family CQJ30_14690 PF13412 Winged helix-turn-helix DNA-binding CQJ30_14695 PF02585 GlcNAc-PI de-N-acetylase CQJ30_14695 PF10633 NPCBM-associated, NEW3 domain of alpha-galactosidase CQJ30_14700 PF14115 CQJ30_14700 CQJ30_14705 PF07875 CQJ30_14705 CQJ30_14710 PF01244 Membrane dipeptidase (Peptidase family M19) CQJ30_14715 PF02254 TrkA-N domain CQJ30_14715 PF07885 Ion channel CQJ30_14720 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 CQJ30_14725 PF00342 Phosphoglucose isomerase CQJ30_14730 PF00465 Iron-containing alcohol dehydrogenase CQJ30_14735 PF01609 Transposase DDE domain CQJ30_14740 PF04070 CQJ30_14740 CQJ30_14745 PF00202 Aminotransferase class-III CQJ30_14750 PF00575 S1 RNA binding domain CQJ30_14755 PF01381 Helix-turn-helix CQJ30_14760 PF12697 Alpha/beta hydrolase family CQJ30_14765 PF00155 Aminotransferase class I and II CQJ30_14775 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD CQJ30_14780 PF00733 Asparagine synthase CQJ30_14780 PF13537 Glutamine amidotransferase domain CQJ30_14790 PF08810 Kinase associated protein B CQJ30_14795 PF00872 CQJ30_14795 CQJ30_14805 PF07690 Major Facilitator Superfamily CQJ30_14810 PF03061 Thioesterase superfamily CQJ30_14815 PF09346 SMI1 / KNR4 family (SUKH-1) CQJ30_14820 PF00005 ABC transporter CQJ30_14825 PF02653 CQJ30_14825 CQJ30_14830 PF03334 CQJ30_14830 CQJ30_14835 PF04066 CQJ30_14835 CQJ30_14840 PF01899 CQJ30_14840 CQJ30_14845 PF00361 NADH-Ubiquinone/plastoquinone (complex I), various chains CQJ30_14850 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L CQJ30_14855 PF04039 CQJ30_14855 CQJ30_14860 PF00361 NADH-Ubiquinone/plastoquinone (complex I), various chains CQJ30_14860 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus CQJ30_14860 PF13244 CQJ30_14860 CQJ30_14865 PF00582 Universal stress protein family CQJ30_14870 PF00589 Phage integrase family CQJ30_14875 PF00056 lactate/malate dehydrogenase, NAD binding domain CQJ30_14875 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain CQJ30_14880 PF07690 Major Facilitator Superfamily CQJ30_14895 PF04285 CQJ30_14895 CQJ30_14900 PF06798 CQJ30_14900 CQJ30_14900 PF08298 PrkA AAA domain CQJ30_14905 PF00881 Nitroreductase family CQJ30_14910 PF00588 SpoU rRNA Methylase family CQJ30_14915 PF12671 CQJ30_14915 CQJ30_14920 PF08331 CQJ30_14920 CQJ30_14920 PF13484 CQJ30_14920 CQJ30_14920 PF13646 HEAT repeats CQJ30_14925 PF06725 3D domain CQJ30_14930 PF14068 CQJ30_14930 CQJ30_14935 PF07992 Pyridine nucleotide-disulphide oxidoreductase CQJ30_14940 PF01521 Iron-sulphur cluster biosynthesis CQJ30_14945 PF07992 Pyridine nucleotide-disulphide oxidoreductase CQJ30_14950 PF07315 Protein of unknown function (DUF1462) CQJ30_14955 PF01106 NifU-like domain CQJ30_14960 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CQJ30_14960 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CQJ30_14970 PF04608 Phosphatidylglycerophosphatase A CQJ30_14975 PF13242 HAD-hyrolase-like CQJ30_14975 PF13344 Haloacid dehalogenase-like hydrolase CQJ30_14980 PF01934 Protein of unknown function DUF86 CQJ30_14985 PF06265 Protein of unknown function (DUF1027) CQJ30_14990 PF01551 Peptidase family M23 CQJ30_14995 PF13458 Periplasmic binding protein CQJ30_15000 PF02653 CQJ30_15000 CQJ30_15005 PF02653 CQJ30_15005 CQJ30_15010 PF00005 ABC transporter CQJ30_15010 PF12399 Branched-chain amino acid ATP-binding cassette transporter CQJ30_15015 PF00005 ABC transporter CQJ30_15020 PF05495 CHY zinc finger CQJ30_15025 PF09560 CQJ30_15025 CQJ30_15030 PF08827 Domain of unknown function (DUF1805) CQJ30_15035 PF00149 Calcineurin-like phosphoesterase CQJ30_15035 PF02872 5'-nucleotidase, C-terminal domain CQJ30_15040 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CQJ30_15040 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CQJ30_15045 PF00266 Aminotransferase class-V CQJ30_15050 PF01458 Uncharacterized protein family (UPF0051) CQJ30_15055 PF01592 NifU-like N terminal domain CQJ30_15060 PF00266 Aminotransferase class-V CQJ30_15065 PF01458 Uncharacterized protein family (UPF0051) CQJ30_15070 PF00005 ABC transporter CQJ30_15075 PF03180 NLPA lipoprotein CQJ30_15080 PF00528 Binding-protein-dependent transport system inner membrane component CQJ30_15085 PF00005 ABC transporter CQJ30_15085 PF09383 NIL domain CQJ30_15090 PF02036 SCP-2 sterol transfer family CQJ30_15095 PF00085 Thioredoxin CQJ30_15105 PF01597 Glycine cleavage H-protein CQJ30_15110 PF03960 ArsC family CQJ30_15115 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CQJ30_15115 PF02770 Acyl-CoA dehydrogenase, middle domain CQJ30_15115 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CQJ30_15120 PF00108 Thiolase, N-terminal domain CQJ30_15120 PF02803 Thiolase, C-terminal domain CQJ30_15125 PF00378 Enoyl-CoA hydratase/isomerase family CQJ30_15125 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain CQJ30_15125 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain CQJ30_15135 PF07875 CQJ30_15135 CQJ30_15140 PF01594 CQJ30_15140 CQJ30_15145 PF07293 CQJ30_15145 CQJ30_15150 PF17370 CQJ30_15150 CQJ30_15155 PF12679 CQJ30_15155 CQJ30_15160 PF00005 ABC transporter CQJ30_15165 PF10633 NPCBM-associated, NEW3 domain of alpha-galactosidase CQJ30_15170 PF04542 Sigma-70 region 2 CQJ30_15170 PF04545 Sigma-70, region 4 CQJ30_15175 PF13490 Putative zinc-finger CQJ30_15180 PF00005 ABC transporter CQJ30_15185 PF00528 Binding-protein-dependent transport system inner membrane component CQJ30_15190 PF00497 Bacterial extracellular solute-binding proteins, family 3 CQJ30_15195 PF00037 4Fe-4S binding domain CQJ30_15210 PF01923 Cobalamin adenosyltransferase CQJ30_15215 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase CQJ30_15220 PF02654 CQJ30_15220 CQJ30_15225 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase CQJ30_15230 PF01385 CQJ30_15230 CQJ30_15230 PF07282 CQJ30_15230 CQJ30_15230 PF12323 CQJ30_15230 CQJ30_15235 PF12651 CQJ30_15235 CQJ30_15240 PF00155 Aminotransferase class I and II CQJ30_15245 PF03186 CQJ30_15245 CQJ30_15250 PF00005 ABC transporter CQJ30_15250 PF01955 CQJ30_15250 CQJ30_15255 PF01032 FecCD transport family CQJ30_15260 PF01497 Periplasmic binding protein CQJ30_15265 PF14542 GCN5-related N-acetyl-transferase CQJ30_15270 PF00892 EamA-like transporter family CQJ30_15275 PF13181 Tetratricopeptide repeat CQJ30_15290 PF00005 ABC transporter CQJ30_15295 PF00005 ABC transporter CQJ30_15310 PF00583 Acetyltransferase (GNAT) family CQJ30_15320 PF13400 CQJ30_15320 CQJ30_15355 PF00092 von Willebrand factor type A domain CQJ30_15365 PF00482 Type II secretion system (T2SS), protein F CQJ30_15370 PF00482 Type II secretion system (T2SS), protein F CQJ30_15375 PF00437 Type II/IV secretion system protein CQJ30_15380 PF13614 AAA domain CQJ30_15385 PF13144 SAF-like CQJ30_15390 PF08282 haloacid dehalogenase-like hydrolase CQJ30_15400 PF02073 Thermophilic metalloprotease (M29) CQJ30_15405 PF01370 NAD dependent epimerase/dehydratase family CQJ30_15405 PF08338 Domain of unknown function (DUF1731) CQJ30_15410 PF01979 Amidohydrolase family CQJ30_15410 PF13382 Adenine deaminase C-terminal domain CQJ30_15420 PF00176 SNF2 family N-terminal domain CQJ30_15420 PF00271 Helicase conserved C-terminal domain CQJ30_15420 PF08455 CQJ30_15420 CQJ30_15425 PF01610 CQJ30_15425 CQJ30_15425 PF13542 CQJ30_15425 CQJ30_15425 PF14690 CQJ30_15425 CQJ30_15440 PF13302 Acetyltransferase (GNAT) domain CQJ30_15450 PF00392 Bacterial regulatory proteins, gntR family CQJ30_15455 PF00005 ABC transporter CQJ30_15465 PF01810 CQJ30_15465 CQJ30_15475 PF00155 Aminotransferase class I and II CQJ30_15475 PF00392 Bacterial regulatory proteins, gntR family CQJ30_15485 PF01381 Helix-turn-helix CQJ30_15490 PF00892 EamA-like transporter family CQJ30_15495 PF02687 CQJ30_15495 CQJ30_15500 PF00005 ABC transporter CQJ30_15505 PF00512 His Kinase A (phospho-acceptor) domain CQJ30_15505 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CQJ30_15510 PF00072 Response regulator receiver domain CQJ30_15510 PF00486 Transcriptional regulatory protein, C terminal CQJ30_15515 PF00293 NUDIX domain CQJ30_15515 PF12535 Hydrolase of X-linked nucleoside diphosphate N terminal CQJ30_15520 PF01909 Nucleotidyltransferase domain CQJ30_15525 PF08780 Nucleotidyltransferase substrate binding protein like CQJ30_15535 PF08282 haloacid dehalogenase-like hydrolase CQJ30_15545 PF00072 Response regulator receiver domain CQJ30_15545 PF00486 Transcriptional regulatory protein, C terminal CQJ30_15550 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CQJ30_15555 PF00005 ABC transporter CQJ30_15560 PF02687 CQJ30_15560 CQJ30_15565 PF17200 CQJ30_15565 CQJ30_15570 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CQJ30_15575 PF09455 CRISPR-associated (Cas) DxTHG family CQJ30_15590 PF09455 CRISPR-associated (Cas) DxTHG family CQJ30_15595 PF03787 RAMP superfamily CQJ30_15605 PF03787 RAMP superfamily CQJ30_15610 PF03787 RAMP superfamily CQJ30_15610 PF09700 CRISPR-associated protein (Cas_Cmr3) CQJ30_15620 PF01609 Transposase DDE domain CQJ30_15620 PF14104 CQJ30_15620 CQJ30_15630 PF03050 CQJ30_15630 CQJ30_15630 PF13005 CQJ30_15630 CQJ30_15630 PF13007 CQJ30_15630 CQJ30_15630 PF13817 CQJ30_15630 CQJ30_15635 PF05717 CQJ30_15635 CQJ30_15655 PF01609 Transposase DDE domain CQJ30_15660 PF01930 Domain of unknown function DUF83 CQJ30_15665 PF00270 DEAD/DEAH box helicase CQJ30_15665 PF00271 Helicase conserved C-terminal domain CQJ30_15670 PF09704 CRISPR-associated protein (Cas_Cas5) CQJ30_15675 PF05107 CQJ30_15675 CQJ30_15680 PF09484 CQJ30_15680 CQJ30_15685 PF01881 CRISPR associated protein Cas6 CQJ30_15695 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CQJ30_15695 PF00874 PRD domain CQJ30_15695 PF05043 Mga helix-turn-helix domain CQJ30_15695 PF08279 HTH domain CQJ30_15700 PF00232 Glycosyl hydrolase family 1 CQJ30_15705 PF02378 Phosphotransferase system, EIIC CQJ30_15715 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CQJ30_15720 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit CQJ30_15725 PF01546 Peptidase family M20/M25/M40 CQJ30_15730 PF00248 Aldo/keto reductase family CQJ30_15735 PF02810 SEC-C motif CQJ30_15735 PF14559 Tetratricopeptide repeat CQJ30_15745 PF01668 SmpB protein CQJ30_15750 PF01609 Transposase DDE domain CQJ30_15750 PF05598 CQJ30_15750 CQJ30_15750 PF13808 CQJ30_15750 CQJ30_15755 PF00575 S1 RNA binding domain CQJ30_15755 PF00773 RNB domain CQJ30_15755 PF08206 Ribonuclease B OB domain CQJ30_15760 PF12146 Putative lysophospholipase CQJ30_15765 PF03840 Preprotein translocase SecG subunit CQJ30_15780 PF01385 CQJ30_15780 CQJ30_15780 PF07282 CQJ30_15780 CQJ30_15790 PF00440 Bacterial regulatory proteins, tetR family CQJ30_15795 PF00746 CQJ30_15795 CQJ30_15800 PF00149 Calcineurin-like phosphoesterase CQJ30_15805 PF01385 CQJ30_15805 CQJ30_15805 PF07282 CQJ30_15805 CQJ30_15805 PF12323 CQJ30_15805 CQJ30_15815 PF09501 CQJ30_15815 CQJ30_15820 PF09501 CQJ30_15820 CQJ30_15825 PF00113 Enolase, C-terminal TIM barrel domain CQJ30_15825 PF03952 Enolase, N-terminal domain CQJ30_15830 PF01676 Metalloenzyme superfamily CQJ30_15830 PF06415 BPG-independent PGAM N-terminus (iPGM_N) CQJ30_15835 PF00121 Triosephosphate isomerase CQJ30_15840 PF00162 Phosphoglycerate kinase CQJ30_15845 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain CQJ30_15845 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain CQJ30_15850 PF04198 Putative sugar-binding domain CQJ30_15855 PF05768 Glutaredoxin-like domain (DUF836) CQJ30_15860 PF00309 CQJ30_15860 CQJ30_15860 PF04552 Sigma-54, DNA binding domain CQJ30_15860 PF04963 Sigma-54 factor, core binding domain CQJ30_15870 PF15919 CQJ30_15870 CQJ30_15875 PF00574 Clp protease CQJ30_15880 PF00381 PTS HPr component phosphorylation site CQJ30_15885 PF02650 WhiA C-terminal HTH domain CQJ30_15885 PF10298 WhiA N-terminal LAGLIDADG-like domain CQJ30_15885 PF14527 WhiA LAGLIDADG-like domain CQJ30_15890 PF01933 Uncharacterised protein family UPF0052 CQJ30_15895 PF03668 CQJ30_15895 CQJ30_15900 PF00293 NUDIX domain CQJ30_15905 PF07992 Pyridine nucleotide-disulphide oxidoreductase CQJ30_15910 PF14559 Tetratricopeptide repeat CQJ30_15915 PF14602 Hexapeptide repeat of succinyl-transferase CQJ30_15920 PF13419 Haloacid dehalogenase-like hydrolase CQJ30_15925 PF07670 Nucleoside recognition CQJ30_15930 PF01790 CQJ30_15930 CQJ30_15935 PF02603 HPr Serine kinase N terminus CQJ30_15935 PF07475 HPr Serine kinase C-terminal domain CQJ30_15945 PF04693 CQJ30_15945 CQJ30_15945 PF13546 CQJ30_15945 CQJ30_15950 PF03235 CQJ30_15950 CQJ30_15955 PF01022 Bacterial regulatory protein, arsR family CQJ30_15960 PF05343 M42 glutamyl aminopeptidase CQJ30_15965 PF07719 Tetratricopeptide repeat CQJ30_15970 PF02810 SEC-C motif CQJ30_16015 PF04851 Type III restriction enzyme, res subunit CQJ30_16020 PF00665 Integrase core domain CQJ30_16025 PF01695 IstB-like ATP binding protein CQJ30_16040 PF13349 CQJ30_16040 CQJ30_16045 PF00005 ABC transporter CQJ30_16050 PF00271 Helicase conserved C-terminal domain CQJ30_16050 PF02151 UvrB/uvrC motif CQJ30_16050 PF04851 Type III restriction enzyme, res subunit CQJ30_16050 PF12344 Ultra-violet resistance protein B CQJ30_16055 PF09964 CQJ30_16055 CQJ30_16060 PF11518 Protein of unknown function (DUF3221) CQJ30_16065 PF03176 MMPL family CQJ30_16070 PF01047 MarR family CQJ30_16075 PF00122 E1-E2 ATPase CQJ30_16075 PF00403 Heavy-metal-associated domain CQJ30_16075 PF00702 haloacid dehalogenase-like hydrolase CQJ30_16080 PF00403 Heavy-metal-associated domain CQJ30_16085 PF02583 Metal-sensitive transcriptional repressor CQJ30_16090 PF01432 Peptidase family M3 CQJ30_16090 PF08439 Oligopeptidase F CQJ30_16095 PF01869 BadF/BadG/BcrA/BcrD ATPase family CQJ30_16095 PF06050 2-hydroxyglutaryl-CoA dehydratase, D-component CQJ30_16095 PF09989 CQJ30_16095 CQJ30_16100 PF00440 Bacterial regulatory proteins, tetR family CQJ30_16105 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CQJ30_16110 PF01609 Transposase DDE domain CQJ30_16120 PF01022 Bacterial regulatory protein, arsR family CQJ30_16125 PF01451 Low molecular weight phosphotyrosine protein phosphatase CQJ30_16135 PF01471 Putative peptidoglycan binding domain CQJ30_16135 PF03572 Peptidase family S41 CQJ30_16135 PF13180 PDZ domain CQJ30_16140 PF01385 CQJ30_16140 CQJ30_16140 PF07282 CQJ30_16140 CQJ30_16140 PF12323 CQJ30_16140 CQJ30_16145 PF01709 Transcriptional regulator CQJ30_16150 PF01551 Peptidase family M23 CQJ30_16155 PF02687 CQJ30_16155 CQJ30_16160 PF00005 ABC transporter CQJ30_16165 PF13442 Cytochrome C oxidase, cbb3-type, subunit III CQJ30_16170 PF02588 CQJ30_16170 CQJ30_16170 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) CQJ30_16180 PF01043 SecA preprotein cross-linking domain CQJ30_16180 PF02810 SEC-C motif CQJ30_16180 PF07516 SecA Wing and Scaffold domain CQJ30_16180 PF07517 SecA DEAD-like domain CQJ30_16185 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein CQJ30_16185 PF16321 CQJ30_16185 CQJ30_16195 PF02561 Flagellar protein FliS CQJ30_16200 PF02465 CQJ30_16200 CQJ30_16200 PF07195 CQJ30_16200 CQJ30_16205 PF03646 FlaG protein CQJ30_16215 PF07690 Major Facilitator Superfamily CQJ30_16220 PF00456 Transketolase, thiamine diphosphate binding domain CQJ30_16220 PF02779 Transketolase, pyrimidine binding domain CQJ30_16220 PF02780 Transketolase, C-terminal domain CQJ30_16225 PF00923 Transaldolase CQJ30_16230 PF01544 CorA-like Mg2+ transporter protein CQJ30_16235 PF07690 Major Facilitator Superfamily CQJ30_16245 PF14534 Domain of unknown function (DUF4440) CQJ30_16250 PF00708 Acylphosphatase CQJ30_16255 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CQJ30_16255 PF00672 HAMP domain CQJ30_16275 PF03050 CQJ30_16275 CQJ30_16275 PF13005 CQJ30_16275 CQJ30_16275 PF13007 CQJ30_16275 CQJ30_16275 PF13817 CQJ30_16275 CQJ30_16280 PF05717 CQJ30_16280 CQJ30_16295 PF00132 Bacterial transferase hexapeptide (six repeats) CQJ30_16295 PF00535 Glycosyl transferase family 2 CQJ30_16295 PF04230 CQJ30_16295 CQJ30_16295 PF13181 Tetratricopeptide repeat CQJ30_16295 PF13431 Tetratricopeptide repeat CQJ30_16300 PF00669 Bacterial flagellin N-terminal helical region CQJ30_16300 PF00700 Bacterial flagellin C-terminal helical region CQJ30_16305 PF02599 Global regulator protein family CQJ30_16310 PF02623 FliW protein CQJ30_16320 PF00669 Bacterial flagellin N-terminal helical region CQJ30_16320 PF00700 Bacterial flagellin C-terminal helical region CQJ30_16325 PF00460 Flagella basal body rod protein CQJ30_16325 PF06429 Flagellar basal body rod FlgEFG protein C-terminal CQJ30_16330 PF05130 FlgN protein CQJ30_16335 PF04316 Anti-sigma-28 factor, FlgM CQJ30_16345 PF00156 Phosphoribosyl transferase domain CQJ30_16350 PF01385 CQJ30_16350 CQJ30_16350 PF07282 CQJ30_16350 CQJ30_16350 PF12323 CQJ30_16350 CQJ30_16355 PF00239 Resolvase, N terminal domain CQJ30_16355 PF13411 MerR HTH family regulatory protein CQJ30_16360 PF00271 Helicase conserved C-terminal domain CQJ30_16360 PF04851 Type III restriction enzyme, res subunit CQJ30_16370 PF01609 Transposase DDE domain CQJ30_16380 PF02645 Uncharacterised protein, DegV family COG1307 CQJ30_16385 PF00872 CQJ30_16385 CQJ30_16390 PF00872 CQJ30_16390 CQJ30_16395 PF08378 CQJ30_16395 CQJ30_16400 PF00072 Response regulator receiver domain CQJ30_16400 PF00196 Bacterial regulatory proteins, luxR family CQJ30_16405 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CQJ30_16405 PF05384 CQJ30_16405 CQJ30_16405 PF07730 Histidine kinase CQJ30_16410 PF01205 Uncharacterized protein family UPF0029 CQJ30_16410 PF09186 Domain of unknown function (DUF1949) CQJ30_16415 PF04203 Sortase family CQJ30_16420 PF01966 HD domain CQJ30_16425 PF03816 Cell envelope-related transcriptional attenuator domain CQJ30_16430 PF12698 ABC-2 family transporter protein CQJ30_16435 PF00005 ABC transporter CQJ30_16435 PF13732 CQJ30_16435 CQJ30_16440 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) CQJ30_16440 PF00364 Biotin-requiring enzyme CQJ30_16440 PF02817 e3 binding domain CQJ30_16445 PF00676 Dehydrogenase E1 component CQJ30_16445 PF02779 Transketolase, pyrimidine binding domain CQJ30_16445 PF16870 CQJ30_16445 CQJ30_16450 PF08123 Histone methylation protein DOT1 CQJ30_16455 PF03167 Uracil DNA glycosylase superfamily CQJ30_16460 PF08282 haloacid dehalogenase-like hydrolase CQJ30_16465 PF00753 Metallo-beta-lactamase superfamily CQJ30_16470 PF00378 Enoyl-CoA hydratase/isomerase family CQJ30_16475 PF03060 Nitronate monooxygenase CQJ30_16480 PF02515 CoA-transferase family III CQJ30_16485 PF00108 Thiolase, N-terminal domain CQJ30_16485 PF02803 Thiolase, C-terminal domain CQJ30_16490 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CQJ30_16490 PF02770 Acyl-CoA dehydrogenase, middle domain CQJ30_16490 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CQJ30_16495 PF00378 Enoyl-CoA hydratase/isomerase family CQJ30_16500 PF13561 Enoyl-(Acyl carrier protein) reductase CQJ30_16505 PF00583 Acetyltransferase (GNAT) family CQJ30_16510 PF01037 AsnC family CQJ30_16510 PF01047 MarR family CQJ30_16515 PF00155 Aminotransferase class I and II CQJ30_16525 PF01546 Peptidase family M20/M25/M40 CQJ30_16530 PF03807 NADP oxidoreductase coenzyme F420-dependent CQJ30_16530 PF14748 Pyrroline-5-carboxylate reductase dimerisation CQJ30_16535 PF07755 Protein of unknown function (DUF1611) CQJ30_16535 PF17396 CQJ30_16535 CQJ30_16555 PF03553 CQJ30_16555 CQJ30_16560 PF03180 NLPA lipoprotein CQJ30_16565 PF00528 Binding-protein-dependent transport system inner membrane component CQJ30_16570 PF00005 ABC transporter CQJ30_16570 PF09383 NIL domain CQJ30_16575 PF01385 CQJ30_16575 CQJ30_16575 PF07282 CQJ30_16575 CQJ30_16580 PF00795 Carbon-nitrogen hydrolase CQJ30_16585 PF00155 Aminotransferase class I and II CQJ30_16590 PF03099 Biotin/lipoate A/B protein ligase family CQJ30_16595 PF04055 Radical SAM superfamily CQJ30_16595 PF16881 CQJ30_16595 CQJ30_16605 PF00872 CQJ30_16605 CQJ30_16615 PF07690 Major Facilitator Superfamily CQJ30_16620 PF00288 GHMP kinases N terminal domain CQJ30_16620 PF08544 GHMP kinases C terminal CQJ30_16625 PF00291 Pyridoxal-phosphate dependent enzyme CQJ30_16630 PF00742 Homoserine dehydrogenase CQJ30_16630 PF03447 Homoserine dehydrogenase, NAD binding domain CQJ30_16635 PF01842 ACT domain CQJ30_16640 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CQJ30_16640 PF00672 HAMP domain CQJ30_16640 PF12729 CQJ30_16640 CQJ30_16645 PF13419 Haloacid dehalogenase-like hydrolase CQJ30_16650 PF00356 Bacterial regulatory proteins, lacI family CQJ30_16650 PF13377 Periplasmic binding protein-like domain CQJ30_16655 PF03633 Glycosyl hydrolase family 65, C-terminal domain CQJ30_16655 PF03636 Glycosyl hydrolase family 65, N-terminal domain CQJ30_16665 PF03109 CQJ30_16665 CQJ30_16675 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase CQJ30_16680 PF01979 Amidohydrolase family CQJ30_16685 PF01380 SIS domain CQJ30_16685 PF01418 Helix-turn-helix domain, rpiR family CQJ30_16690 PF04131 Putative N-acetylmannosamine-6-phosphate epimerase CQJ30_16695 PF01385 CQJ30_16695 CQJ30_16695 PF07282 CQJ30_16695 CQJ30_16695 PF12323 CQJ30_16695 CQJ30_16700 PF00239 Resolvase, N terminal domain CQJ30_16700 PF13411 MerR HTH family regulatory protein CQJ30_16715 PF02525 Flavodoxin-like fold CQJ30_16725 PF06338 CQJ30_16725 CQJ30_16730 PF03932 CutC family CQJ30_16745 PF01385 CQJ30_16745 CQJ30_16745 PF07282 CQJ30_16745 CQJ30_16745 PF12323 CQJ30_16745 CQJ30_16750 PF00239 Resolvase, N terminal domain CQJ30_16750 PF13411 MerR HTH family regulatory protein CQJ30_16760 PF05168 HEPN domain CQJ30_16765 PF01053 Cys/Met metabolism PLP-dependent enzyme CQJ30_16770 PF02445 Quinolinate synthetase A protein CQJ30_16775 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain CQJ30_16775 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain CQJ30_16780 PF00890 FAD binding domain CQJ30_16780 PF02910 Fumarate reductase flavoprotein C-term CQJ30_16785 PF00266 Aminotransferase class-V CQJ30_16790 PF02829 3H domain CQJ30_16790 PF08279 HTH domain CQJ30_16795 PF01566 CQJ30_16795 CQJ30_16810 PF00107 Zinc-binding dehydrogenase CQJ30_16810 PF08240 Alcohol dehydrogenase GroES-like domain CQJ30_16815 PF02056 Family 4 glycosyl hydrolase CQJ30_16815 PF11975 Family 4 glycosyl hydrolase C-terminal domain CQJ30_16825 PF02378 Phosphotransferase system, EIIC CQJ30_16830 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CQJ30_16835 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit CQJ30_16840 PF05913 Bacterial protein of unknown function (DUF871) CQJ30_16845 PF01869 BadF/BadG/BcrA/BcrD ATPase family CQJ30_16850 PF03702 Uncharacterised protein family (UPF0075) CQJ30_16855 PF01380 SIS domain CQJ30_16860 PF01380 SIS domain CQJ30_16860 PF01418 Helix-turn-helix domain, rpiR family CQJ30_16865 PF02638 CQJ30_16865 CQJ30_16875 PF00232 Glycosyl hydrolase family 1 CQJ30_16880 PF00356 Bacterial regulatory proteins, lacI family CQJ30_16880 PF13377 Periplasmic binding protein-like domain CQJ30_16885 PF00528 Binding-protein-dependent transport system inner membrane component CQJ30_16890 PF00528 Binding-protein-dependent transport system inner membrane component CQJ30_16895 PF13416 Bacterial extracellular solute-binding protein CQJ30_16900 PF04854 CQJ30_16900 CQJ30_16905 PF13580 SIS domain CQJ30_16910 PF03611 CQJ30_16910 CQJ30_16915 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CQJ30_16920 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CQJ30_16925 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CQJ30_16925 PF00874 PRD domain CQJ30_16925 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CQJ30_16925 PF08279 HTH domain CQJ30_16930 PF01266 FAD dependent oxidoreductase CQJ30_16930 PF16901 CQJ30_16930 CQJ30_16935 PF00370 FGGY family of carbohydrate kinases, N-terminal domain CQJ30_16935 PF02782 FGGY family of carbohydrate kinases, C-terminal domain CQJ30_16940 PF00230 Major intrinsic protein CQJ30_16945 PF04309 Glycerol-3-phosphate responsive antiterminator CQJ30_16950 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CQJ30_16955 PF17329 CQJ30_16955 CQJ30_16960 PF00440 Bacterial regulatory proteins, tetR family CQJ30_16965 PF01408 Oxidoreductase family, NAD-binding Rossmann fold CQJ30_16970 PF08282 haloacid dehalogenase-like hydrolase CQJ30_16975 PF01053 Cys/Met metabolism PLP-dependent enzyme CQJ30_16980 PF01053 Cys/Met metabolism PLP-dependent enzyme CQJ30_16985 PF02361 Cobalt transport protein CQJ30_16990 PF00005 ABC transporter CQJ30_16990 PF12558 CQJ30_16990 CQJ30_16995 PF07155 ECF-type riboflavin transporter, S component CQJ30_17000 PF01887 S-adenosyl-l-methionine hydroxide adenosyltransferase CQJ30_17005 PF00480 ROK family CQJ30_17010 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CQJ30_17015 PF02378 Phosphotransferase system, EIIC CQJ30_17020 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit CQJ30_17025 PF00232 Glycosyl hydrolase family 1 CQJ30_17030 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CQJ30_17030 PF00874 PRD domain CQJ30_17030 PF05043 Mga helix-turn-helix domain CQJ30_17030 PF08279 HTH domain CQJ30_17040 PF00158 Sigma-54 interaction domain CQJ30_17040 PF02954 Bacterial regulatory protein, Fis family CQJ30_17040 PF13426 PAS domain CQJ30_17045 PF00171 Aldehyde dehydrogenase family CQJ30_17050 PF01619 Proline dehydrogenase CQJ30_17060 PF01385 CQJ30_17060 CQJ30_17060 PF07282 CQJ30_17060 CQJ30_17065 PF05651 CQJ30_17065 CQJ30_17070 PF01609 Transposase DDE domain CQJ30_17070 PF05598 CQJ30_17070 CQJ30_17080 PF13556 PucR C-terminal helix-turn-helix domain CQJ30_17085 PF02595 Glycerate kinase family CQJ30_17090 PF02447 CQJ30_17090 CQJ30_17095 PF00375 Sodium:dicarboxylate symporter family CQJ30_17100 PF13419 Haloacid dehalogenase-like hydrolase CQJ30_17110 PF06445 GyrI-like small molecule binding domain CQJ30_17110 PF12833 Helix-turn-helix domain CQJ30_17115 PF01238 Phosphomannose isomerase type I CQJ30_17125 PF01797 Transposase IS200 like CQJ30_17140 PF00149 Calcineurin-like phosphoesterase CQJ30_17140 PF02872 5'-nucleotidase, C-terminal domain CQJ30_17145 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CQJ30_17145 PF02403 Seryl-tRNA synthetase N-terminal domain CQJ30_17150 PF08348 CQJ30_17150 CQJ30_17150 PF13309 CQJ30_17150 CQJ30_17155 PF03315 Serine dehydratase beta chain CQJ30_17160 PF03313 CQJ30_17160 CQJ30_17165 PF03222 Tryptophan/tyrosine permease family CQJ30_17170 PF01476 LysM domain CQJ30_17170 PF06725 3D domain CQJ30_17175 PF13472 GDSL-like Lipase/Acylhydrolase family CQJ30_17190 PF01609 Transposase DDE domain CQJ30_17190 PF05598 CQJ30_17190 CQJ30_17200 PF01609 Transposase DDE domain CQJ30_17210 PF00440 Bacterial regulatory proteins, tetR family CQJ30_17215 PF00893 Small Multidrug Resistance protein CQJ30_17220 PF00893 Small Multidrug Resistance protein CQJ30_17225 PF01609 Transposase DDE domain CQJ30_17235 PF02556 Preprotein translocase subunit SecB CQJ30_17240 PF07286 Protein of unknown function (DUF1445) CQJ30_17245 PF01566 CQJ30_17245 CQJ30_17250 PF03746 LamB/YcsF family CQJ30_17255 PF02626 Allophanate hydrolase subunit 2 CQJ30_17260 PF02682 Allophanate hydrolase subunit 1 CQJ30_17270 PF00375 Sodium:dicarboxylate symporter family CQJ30_17275 PF14487 CQJ30_17275 CQJ30_17285 PF01385 CQJ30_17285 CQJ30_17285 PF07282 CQJ30_17285 CQJ30_17285 PF12323 CQJ30_17285 CQJ30_17290 PF00239 Resolvase, N terminal domain CQJ30_17290 PF13411 MerR HTH family regulatory protein CQJ30_17295 PF01661 Macro domain CQJ30_17300 PF01074 Glycosyl hydrolases family 38 N-terminal domain CQJ30_17300 PF07748 Glycosyl hydrolases family 38 C-terminal domain CQJ30_17300 PF09261 Alpha mannosidase, middle domain CQJ30_17305 PF00528 Binding-protein-dependent transport system inner membrane component CQJ30_17310 PF00528 Binding-protein-dependent transport system inner membrane component CQJ30_17315 PF01547 Bacterial extracellular solute-binding protein CQJ30_17320 PF13443 Cro/C1-type HTH DNA-binding domain CQJ30_17325 PF02233 NAD(P) transhydrogenase beta subunit CQJ30_17330 PF01262 Alanine dehydrogenase/PNT, C-terminal domain CQJ30_17330 PF05222 Alanine dehydrogenase/PNT, N-terminal domain CQJ30_17330 PF12769 Domain of unknown function (DUF3814) CQJ30_17345 PF03235 CQJ30_17345 CQJ30_17350 PF01555 DNA methylase CQJ30_17355 PF02661 Fic/DOC family CQJ30_17355 PF13784 Fic/DOC family N-terminal CQJ30_17360 PF04542 Sigma-70 region 2 CQJ30_17360 PF08281 Sigma-70, region 4 CQJ30_17365 PF13419 Haloacid dehalogenase-like hydrolase CQJ30_17370 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CQJ30_17370 PF00874 PRD domain CQJ30_17370 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CQJ30_17370 PF08279 HTH domain CQJ30_17375 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CQJ30_17380 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CQJ30_17385 PF02378 Phosphotransferase system, EIIC CQJ30_17390 PF08013 Tagatose 6 phosphate kinase CQJ30_17400 PF05598 CQJ30_17400 CQJ30_17405 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) CQJ30_17410 PF01116 Fructose-bisphosphate aldolase class-II CQJ30_17415 PF01116 Fructose-bisphosphate aldolase class-II CQJ30_17420 PF03050 CQJ30_17420 CQJ30_17425 PF01116 Fructose-bisphosphate aldolase class-II CQJ30_17435 PF00370 FGGY family of carbohydrate kinases, N-terminal domain CQJ30_17435 PF02782 FGGY family of carbohydrate kinases, C-terminal domain CQJ30_17440 PF00107 Zinc-binding dehydrogenase CQJ30_17440 PF08240 Alcohol dehydrogenase GroES-like domain CQJ30_17445 PF03613 CQJ30_17445 CQJ30_17450 PF03609 CQJ30_17450 CQJ30_17455 PF03830 PTS system sorbose subfamily IIB component CQJ30_17460 PF03610 PTS system fructose IIA component CQJ30_17465 PF01116 Fructose-bisphosphate aldolase class-II CQJ30_17470 PF01381 Helix-turn-helix CQJ30_17480 PF00877 NlpC/P60 family CQJ30_17485 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain CQJ30_17485 PF13378 Enolase C-terminal domain-like CQJ30_17490 PF05684 CQJ30_17490 CQJ30_17495 PF12986 Domain of unknown function (DUF3870) CQJ30_17510 PF01116 Fructose-bisphosphate aldolase class-II CQJ30_17515 PF01116 Fructose-bisphosphate aldolase class-II CQJ30_17520 PF02378 Phosphotransferase system, EIIC CQJ30_17525 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CQJ30_17530 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CQJ30_17535 PF01381 Helix-turn-helix CQJ30_17545 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain CQJ30_17545 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain CQJ30_17545 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain CQJ30_17560 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CQJ30_17565 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CQJ30_17565 PF02378 Phosphotransferase system, EIIC CQJ30_17570 PF01116 Fructose-bisphosphate aldolase class-II CQJ30_17575 PF00455 CQJ30_17575 CQJ30_17575 PF08220 DeoR-like helix-turn-helix domain CQJ30_17585 PF00535 Glycosyl transferase family 2 CQJ30_17590 PF00534 Glycosyl transferases group 1 CQJ30_17590 PF13439 Glycosyltransferase Family 4 CQJ30_17595 PF14296 CQJ30_17595 CQJ30_17600 PF00534 Glycosyl transferases group 1 CQJ30_17605 PF02397 CQJ30_17605 CQJ30_17610 PF01370 NAD dependent epimerase/dehydratase family CQJ30_17615 PF13535 ATP-grasp domain CQJ30_17620 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family CQJ30_17625 PF02719 Polysaccharide biosynthesis protein CQJ30_17625 PF13727 CoA-binding domain CQJ30_17630 PF00483 Nucleotidyl transferase CQJ30_17640 PF13614 AAA domain CQJ30_17645 PF02706 Chain length determinant protein CQJ30_17645 PF13807 CQJ30_17645 CQJ30_17660 PF08378 CQJ30_17660 CQJ30_17665 PF00654 Voltage gated chloride channel CQJ30_17665 PF02080 TrkA-C domain CQJ30_17675 PF00149 Calcineurin-like phosphoesterase CQJ30_17675 PF02872 5'-nucleotidase, C-terminal domain CQJ30_17680 PF08378 CQJ30_17680 CQJ30_17715 PF03816 Cell envelope-related transcriptional attenuator domain CQJ30_17720 PF03816 Cell envelope-related transcriptional attenuator domain CQJ30_17725 PF00884 Sulfatase CQJ30_17735 PF04138 CQJ30_17735 CQJ30_17745 PF14264 CQJ30_17745 CQJ30_17765 PF05717 CQJ30_17765 CQJ30_17775 PF01520 N-acetylmuramoyl-L-alanine amidase CQJ30_17775 PF07538 CQJ30_17775 CQJ30_17780 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase CQJ30_17780 PF07538 CQJ30_17780 CQJ30_17780 PF08239 Bacterial SH3 domain CQJ30_17790 PF01943 CQJ30_17790 CQJ30_17790 PF14667 Polysaccharide biosynthesis C-terminal domain CQJ30_17795 PF00535 Glycosyl transferase family 2 CQJ30_17800 PF00535 Glycosyl transferase family 2 CQJ30_17805 PF00535 Glycosyl transferase family 2 CQJ30_17815 PF00535 Glycosyl transferase family 2 CQJ30_17820 PF00535 Glycosyl transferase family 2 CQJ30_17825 PF00483 Nucleotidyl transferase CQJ30_17830 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase CQJ30_17835 PF16363 CQJ30_17835 CQJ30_17840 PF04321 RmlD substrate binding domain CQJ30_17850 PF00953 Glycosyl transferase family 4 CQJ30_17855 PF00953 Glycosyl transferase family 4 CQJ30_17860 PF00483 Nucleotidyl transferase CQJ30_17865 PF01944 CQJ30_17865 CQJ30_17875 PF00176 SNF2 family N-terminal domain CQJ30_17875 PF00271 Helicase conserved C-terminal domain CQJ30_17875 PF12419 CQJ30_17875 CQJ30_17900 PF12784 CQJ30_17900 CQJ30_17905 PF01385 CQJ30_17905 CQJ30_17905 PF07282 CQJ30_17905 CQJ30_17910 PF00436 Single-strand binding protein family CQJ30_17915 PF14183 CQJ30_17915 CQJ30_17925 PF07977 FabA-like domain CQJ30_17930 PF11772 CQJ30_17930 CQJ30_17935 PF00460 Flagella basal body rod protein CQJ30_17935 PF06429 Flagellar basal body rod FlgEFG protein C-terminal CQJ30_17940 PF00460 Flagella basal body rod protein CQJ30_17940 PF06429 Flagellar basal body rod FlgEFG protein C-terminal CQJ30_17945 PF06723 MreB/Mbl protein CQJ30_17950 PF12116 Stage III sporulation protein D CQJ30_17955 PF01551 Peptidase family M23 CQJ30_17960 PF04892 CQJ30_17960 CQJ30_17965 PF08486 CQJ30_17965 CQJ30_17970 PF14140 CQJ30_17970 CQJ30_17975 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) CQJ30_17980 PF08680 Protein of unknown function (DUF1779) CQJ30_17985 PF06612 CQJ30_17985 CQJ30_17990 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain CQJ30_17990 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain CQJ30_17995 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CQJ30_17995 PF02874 ATP synthase alpha/beta family, beta-barrel domain CQJ30_18000 PF00231 ATP synthase CQJ30_18005 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CQJ30_18005 PF00306 ATP synthase alpha/beta chain, C terminal domain CQJ30_18005 PF02874 ATP synthase alpha/beta family, beta-barrel domain CQJ30_18010 PF00213 ATP synthase delta (OSCP) subunit CQJ30_18015 PF00430 ATP synthase B/B' CF(0) CQJ30_18020 PF00137 ATP synthase subunit C CQJ30_18025 PF00119 ATP synthase A chain CQJ30_18030 PF03899 CQJ30_18030 CQJ30_18035 PF00082 Subtilase family CQJ30_18035 PF02225 PA domain CQJ30_18035 PF05922 Peptidase inhibitor I9 CQJ30_18040 PF01609 Transposase DDE domain CQJ30_18050 PF02417 CQJ30_18050 CQJ30_18055 PF02417 CQJ30_18055 CQJ30_18060 PF01019 Gamma-glutamyltranspeptidase CQJ30_18065 PF01037 AsnC family CQJ30_18065 PF13404 AsnC-type helix-turn-helix domain CQJ30_18070 PF00528 Binding-protein-dependent transport system inner membrane component CQJ30_18075 PF00528 Binding-protein-dependent transport system inner membrane component CQJ30_18075 PF12911 CQJ30_18075 CQJ30_18080 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CQJ30_18085 PF00005 ABC transporter CQJ30_18085 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CQJ30_18090 PF00005 ABC transporter CQJ30_18090 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CQJ30_18095 PF14681 Uracil phosphoribosyltransferase CQJ30_18100 PF00665 Integrase core domain CQJ30_18105 PF01695 IstB-like ATP binding protein CQJ30_18110 PF00464 Serine hydroxymethyltransferase CQJ30_18115 PF04260 Protein of unknown function (DUF436) CQJ30_18120 PF02502 Ribose/Galactose Isomerase CQJ30_18125 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CQJ30_18125 PF00672 HAMP domain CQJ30_18130 PF01451 Low molecular weight phosphotyrosine protein phosphatase CQJ30_18135 PF02659 CQJ30_18135 CQJ30_18140 PF01300 Telomere recombination CQJ30_18140 PF03481 Putative GTP-binding controlling metal-binding CQJ30_18145 PF09551 CQJ30_18145 CQJ30_18150 PF05175 Methyltransferase small domain CQJ30_18155 PF00472 RF-1 domain CQJ30_18155 PF03462 PCRF domain CQJ30_18160 PF00265 Thymidine kinase CQJ30_18165 PF01197 Ribosomal protein L31 CQJ30_18170 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CQJ30_18170 PF07497 Rho termination factor, RNA-binding domain CQJ30_18170 PF07498 Rho termination factor, N-terminal domain CQJ30_18175 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded CQJ30_18180 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) CQJ30_18185 PF01116 Fructose-bisphosphate aldolase class-II CQJ30_18190 PF00072 Response regulator receiver domain CQJ30_18200 PF12730 CQJ30_18200 CQJ30_18205 PF12730 CQJ30_18205 CQJ30_18210 PF00005 ABC transporter CQJ30_18215 PF00512 His Kinase A (phospho-acceptor) domain CQJ30_18215 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CQJ30_18220 PF00072 Response regulator receiver domain CQJ30_18220 PF00486 Transcriptional regulatory protein, C terminal CQJ30_18225 PF05147 Lanthionine synthetase C-like protein CQJ30_18230 PF00005 ABC transporter CQJ30_18235 PF04738 CQJ30_18235 CQJ30_18235 PF14028 CQJ30_18235 CQJ30_18240 PF02052 CQJ30_18240 CQJ30_18245 PF10740 Protein of unknown function (DUF2529) CQJ30_18250 PF00117 Glutamine amidotransferase class-I CQJ30_18250 PF06418 CTP synthase N-terminus CQJ30_18255 PF05066 HB1, ASXL, restriction endonuclease HTH domain CQJ30_18260 PF01642 Methylmalonyl-CoA mutase CQJ30_18260 PF02310 B12 binding domain CQJ30_18260 PF03308 ArgK protein CQJ30_18265 PF00440 Bacterial regulatory proteins, tetR family CQJ30_18270 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CQJ30_18270 PF02770 Acyl-CoA dehydrogenase, middle domain CQJ30_18270 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CQJ30_18275 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CQJ30_18275 PF02770 Acyl-CoA dehydrogenase, middle domain CQJ30_18275 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CQJ30_18280 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain CQJ30_18280 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain CQJ30_18285 PF00108 Thiolase, N-terminal domain CQJ30_18285 PF02803 Thiolase, C-terminal domain CQJ30_18290 PF02754 CQJ30_18290 CQJ30_18290 PF13183 4Fe-4S dicluster domain CQJ30_18295 PF13091 PLD-like domain CQJ30_18305 PF00750 tRNA synthetases class I (R) CQJ30_18305 PF03485 Arginyl tRNA synthetase N terminal domain CQJ30_18305 PF05746 DALR anticodon binding domain CQJ30_18310 PF09148 Domain of unknown function (DUF1934) CQJ30_18315 PF00905 Penicillin binding protein transpeptidase domain CQJ30_18315 PF00912 Transglycosylase CQJ30_18320 PF08741 CQJ30_18320 CQJ30_18325 PF02163 Peptidase family M50 CQJ30_18330 PF01361 Tautomerase enzyme CQJ30_18340 PF01966 HD domain CQJ30_18360 PF07293 CQJ30_18360 CQJ30_18370 PF03099 Biotin/lipoate A/B protein ligase family CQJ30_18375 PF01515 Phosphate acetyl/butaryl transferase CQJ30_18380 PF06778 Chlorite dismutase CQJ30_18385 PF07486 Cell Wall Hydrolase CQJ30_18390 PF09671 CQJ30_18390 CQJ30_18395 PF04241 CQJ30_18395 CQJ30_18400 PF17261 CQJ30_18400 CQJ30_18405 PF01564 Spermine/spermidine synthase CQJ30_18405 PF17284 CQJ30_18405 CQJ30_18410 PF14014 CQJ30_18410 CQJ30_18415 PF01385 CQJ30_18415 CQJ30_18415 PF07282 CQJ30_18415 CQJ30_18415 PF12323 CQJ30_18415 CQJ30_18420 PF01797 Transposase IS200 like CQJ30_18425 PF04854 CQJ30_18425 CQJ30_18430 PF01385 CQJ30_18430 CQJ30_18430 PF07282 CQJ30_18430 CQJ30_18435 PF00528 Binding-protein-dependent transport system inner membrane component CQJ30_18445 PF03632 Glycosyl hydrolase family 65 central catalytic domain CQJ30_18445 PF03633 Glycosyl hydrolase family 65, C-terminal domain CQJ30_18445 PF03636 Glycosyl hydrolase family 65, N-terminal domain CQJ30_18450 PF12833 Helix-turn-helix domain CQJ30_18455 PF08830 Protein of unknown function (DUF1806) CQJ30_18460 PF02585 GlcNAc-PI de-N-acetylase CQJ30_18470 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CQJ30_18470 PF02770 Acyl-CoA dehydrogenase, middle domain CQJ30_18475 PF00501 AMP-binding enzyme CQJ30_18475 PF13193 AMP-binding enzyme C-terminal domain CQJ30_18480 PF13411 MerR HTH family regulatory protein CQJ30_18485 PF00128 Alpha amylase, catalytic domain CQJ30_18485 PF16657 CQJ30_18485 CQJ30_18490 PF00356 Bacterial regulatory proteins, lacI family CQJ30_18490 PF13377 Periplasmic binding protein-like domain CQJ30_18495 PF13416 Bacterial extracellular solute-binding protein CQJ30_18500 PF00528 Binding-protein-dependent transport system inner membrane component CQJ30_18505 PF00528 Binding-protein-dependent transport system inner membrane component CQJ30_18510 PF01557 Fumarylacetoacetate (FAA) hydrolase family CQJ30_18515 PF05343 M42 glutamyl aminopeptidase CQJ30_18525 PF02517 CAAX protease self-immunity CQJ30_18530 PF07853 CQJ30_18530 CQJ30_18535 PF00392 Bacterial regulatory proteins, gntR family CQJ30_18540 PF04397 LytTr DNA-binding domain CQJ30_18545 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain CQJ30_18545 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain CQJ30_18560 PF07690 Major Facilitator Superfamily CQJ30_18580 PF09346 SMI1 / KNR4 family (SUKH-1) CQJ30_18585 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CQJ30_18590 PF00571 CBS domain CQJ30_18590 PF01595 CQJ30_18590 CQJ30_18590 PF03471 Transporter associated domain CQJ30_18595 PF00582 Universal stress protein family CQJ30_18605 PF00535 Glycosyl transferase family 2 CQJ30_18610 PF00375 Sodium:dicarboxylate symporter family CQJ30_18615 PF01039 Carboxyl transferase domain CQJ30_18620 PF00378 Enoyl-CoA hydratase/isomerase family CQJ30_18625 PF00682 HMGL-like CQJ30_18630 PF00364 Biotin-requiring enzyme CQJ30_18635 PF00289 Carbamoyl-phosphate synthase L chain, N-terminal domain CQJ30_18635 PF02785 Biotin carboxylase C-terminal domain CQJ30_18635 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain CQJ30_18640 PF00501 AMP-binding enzyme CQJ30_18640 PF13193 AMP-binding enzyme C-terminal domain CQJ30_18645 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CQJ30_18645 PF02770 Acyl-CoA dehydrogenase, middle domain CQJ30_18645 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CQJ30_18650 PF00440 Bacterial regulatory proteins, tetR family CQJ30_18650 PF08359 YsiA-like protein, C-terminal region CQJ30_18655 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CQJ30_18655 PF03466 LysR substrate binding domain CQJ30_18665 PF01501 Glycosyl transferase family 8 CQJ30_18670 PF01546 Peptidase family M20/M25/M40 CQJ30_18670 PF07687 Peptidase dimerisation domain CQJ30_18675 PF00474 Sodium:solute symporter family CQJ30_18680 PF04341 CQJ30_18680 CQJ30_18685 PF00860 Permease family CQJ30_18695 PF02535 CQJ30_18695 CQJ30_18710 PF00746 CQJ30_18710 CQJ30_18710 PF14478 Domain of unknown function (DUF4430) CQJ30_18715 PF14478 Domain of unknown function (DUF4430) CQJ30_18720 PF02361 Cobalt transport protein CQJ30_18725 PF00005 ABC transporter CQJ30_18730 PF12822 Protein of unknown function (DUF3816) CQJ30_18740 PF01385 CQJ30_18740 CQJ30_18740 PF07282 CQJ30_18740 CQJ30_18740 PF12323 CQJ30_18740 CQJ30_18745 PF00239 Resolvase, N terminal domain CQJ30_18745 PF13411 MerR HTH family regulatory protein CQJ30_18750 PF00005 ABC transporter CQJ30_18750 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CQJ30_18755 PF00005 ABC transporter CQJ30_18755 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CQJ30_18760 PF00528 Binding-protein-dependent transport system inner membrane component CQJ30_18760 PF12911 CQJ30_18760 CQJ30_18765 PF00528 Binding-protein-dependent transport system inner membrane component CQJ30_18770 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CQJ30_18775 PF13038 CQJ30_18775 CQJ30_18780 PF00199 Catalase CQJ30_18780 PF06628 Catalase-related immune-responsive CQJ30_18785 PF03435 Saccharopine dehydrogenase CQJ30_18785 PF16653 CQJ30_18785 CQJ30_18790 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain CQJ30_18795 PF00578 AhpC/TSA family CQJ30_18800 PF07992 Pyridine nucleotide-disulphide oxidoreductase CQJ30_18800 PF13192 Thioredoxin domain CQJ30_18805 PF03749 Sugar fermentation stimulation protein CQJ30_18810 PF06039 CQJ30_18810 CQJ30_18815 PF00581 Rhodanese-like domain CQJ30_18820 PF05598 CQJ30_18820 CQJ30_18820 PF13586 CQJ30_18820 CQJ30_18835 PF02386 Cation transport protein CQJ30_18845 PF01609 Transposase DDE domain CQJ30_18845 PF05598 CQJ30_18845 CQJ30_18845 PF13808 CQJ30_18845 CQJ30_18850 PF02254 TrkA-N domain CQJ30_18855 PF02590 Predicted SPOUT methyltransferase CQJ30_18860 PF11700 CQJ30_18860 CQJ30_18865 PF05958 tRNA (Uracil-5-)-methyltransferase CQJ30_18870 PF00072 Response regulator receiver domain CQJ30_18870 PF00486 Transcriptional regulatory protein, C terminal CQJ30_18875 PF00512 His Kinase A (phospho-acceptor) domain CQJ30_18875 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CQJ30_18890 PF00005 ABC transporter CQJ30_18895 PF14116 CQJ30_18895 CQJ30_18900 PF13180 PDZ domain CQJ30_18900 PF13365 Trypsin-like peptidase domain CQJ30_18905 PF00753 Metallo-beta-lactamase superfamily CQJ30_18910 PF09648 YycH protein CQJ30_18915 PF07435 YycH protein CQJ30_18920 PF00512 His Kinase A (phospho-acceptor) domain CQJ30_18920 PF00672 HAMP domain CQJ30_18920 PF00989 PAS fold CQJ30_18920 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CQJ30_18925 PF00072 Response regulator receiver domain CQJ30_18925 PF00486 Transcriptional regulatory protein, C terminal CQJ30_18930 PF01476 LysM domain CQJ30_18930 PF01551 Peptidase family M23 CQJ30_18930 PF07501 G5 domain CQJ30_18935 PF00709 Adenylosuccinate synthetase CQJ30_18940 PF00772 DnaB-like helicase N terminal domain CQJ30_18940 PF03796 DnaB-like helicase C terminal domain CQJ30_18945 PF01281 Ribosomal protein L9, N-terminal domain CQJ30_18945 PF03948 Ribosomal protein L9, C-terminal domain CQJ30_18950 PF01368 DHH family CQJ30_18950 PF02272 DHHA1 domain CQJ30_18955 PF09991 CQJ30_18955 CQJ30_18960 PF01084 Ribosomal protein S18 CQJ30_18965 PF00436 Single-strand binding protein family CQJ30_18970 PF01250 Ribosomal protein S6 CQJ30_18975 PF01609 Transposase DDE domain CQJ30_18975 PF05598 CQJ30_18975 CQJ30_18975 PF13808 CQJ30_18975 CQJ30_18980 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) CQJ30_18980 PF00364 Biotin-requiring enzyme CQJ30_18980 PF02817 e3 binding domain CQJ30_18985 PF02779 Transketolase, pyrimidine binding domain CQJ30_18985 PF02780 Transketolase, C-terminal domain CQJ30_18990 PF00676 Dehydrogenase E1 component CQJ30_18995 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CQJ30_18995 PF07992 Pyridine nucleotide-disulphide oxidoreductase CQJ30_19000 PF00158 Sigma-54 interaction domain CQJ30_19000 PF01590 GAF domain CQJ30_19000 PF02954 Bacterial regulatory protein, Fis family CQJ30_19005 PF01926 50S ribosome-binding GTPase CQJ30_19005 PF06071 Protein of unknown function (DUF933) CQJ30_19010 PF06107 CQJ30_19010 CQJ30_19015 PF06866 CQJ30_19015 CQJ30_19020 PF04474 CQJ30_19020 CQJ30_19025 PF02195 ParB-like nuclease domain CQJ30_19030 PF13614 AAA domain CQJ30_19035 PF01385 CQJ30_19035 CQJ30_19035 PF07282 CQJ30_19035 CQJ30_19035 PF12323 CQJ30_19035 CQJ30_19040 PF01797 Transposase IS200 like CQJ30_19045 PF02195 ParB-like nuclease domain CQJ30_19050 PF02527 rRNA small subunit methyltransferase G CQJ30_19055 PF01134 Glucose inhibited division protein A CQJ30_19055 PF13932 GidA associated domain 3 CQJ30_19060 PF01926 50S ribosome-binding GTPase CQJ30_19060 PF10396 GTP-binding protein TrmE N-terminus CQJ30_19060 PF12631 Catalytic cysteine-containing C-terminus of GTPase, MnmE CQJ30_19065 PF01424 R3H domain CQJ30_19065 PF13083 KH domain CQJ30_19065 PF14804 Jag N-terminus CQJ30_19070 PF02096 60Kd inner membrane protein CQJ30_19075 PF00825 Ribonuclease P CQJ30_19080 PF00468 Ribosomal protein L34