locus-tag class description CAB88_00060 PF02595 Glycerate kinase family CAB88_00065 PF00491 Arginase family CAB88_00070 PF02457 DisA bacterial checkpoint controller nucleotide-binding CAB88_00075 PF07949 YbbR-like protein CAB88_00080 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III CAB88_00080 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I CAB88_00080 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II CAB88_00080 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain CAB88_00090 PF01380 SIS domain CAB88_00095 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region CAB88_00095 PF00326 Prolyl oligopeptidase family CAB88_00120 PF00528 Binding-protein-dependent transport system inner membrane component CAB88_00125 PF00005 ABC transporter CAB88_00125 PF09383 NIL domain CAB88_00130 PF03180 NLPA lipoprotein CAB88_00135 PF08240 Alcohol dehydrogenase GroES-like domain CAB88_00135 PF00107 Zinc-binding dehydrogenase CAB88_00145 PF01565 FAD binding domain CAB88_00150 PF07690 Major Facilitator Superfamily CAB88_00160 PF07690 Major Facilitator Superfamily CAB88_00180 PF00528 Binding-protein-dependent transport system inner membrane component CAB88_00190 PF00005 ABC transporter CAB88_00190 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CAB88_00195 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CAB88_00195 PF00005 ABC transporter CAB88_00200 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CAB88_00215 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CAB88_00220 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CAB88_00225 PF00248 Aldo/keto reductase family CAB88_00230 PF03807 NADP oxidoreductase coenzyme F420-dependent CAB88_00230 PF14748 Pyrroline-5-carboxylate reductase dimerisation CAB88_00240 PF04973 Nicotinamide mononucleotide transporter CAB88_00245 PF06800 Sugar transport protein CAB88_00250 PF00528 Binding-protein-dependent transport system inner membrane component CAB88_00260 PF12727 PBP superfamily domain CAB88_00260 PF12728 Helix-turn-helix domain CAB88_00275 PF03466 LysR substrate binding domain CAB88_00275 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CAB88_00280 PF00892 EamA-like transporter family CAB88_00285 PF14142 YrzO-like protein CAB88_00295 PF01553 Acyltransferase CAB88_00310 PF00356 Bacterial regulatory proteins, lacI family CAB88_00310 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family CAB88_00320 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) CAB88_00320 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 CAB88_00340 PF10096 Uncharacterized protein conserved in bacteria (DUF2334) CAB88_00365 PF12848 ABC transporter CAB88_00365 PF00005 ABC transporter CAB88_00365 PF16326 ABC transporter C-terminal domain CAB88_00380 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CAB88_00385 PF00528 Binding-protein-dependent transport system inner membrane component CAB88_00395 PF00005 ABC transporter CAB88_00395 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CAB88_00400 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CAB88_00400 PF00005 ABC transporter CAB88_00435 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CAB88_00440 PF01557 Fumarylacetoacetate (FAA) hydrolase family CAB88_00450 PF13520 Amino acid permease CAB88_00460 PF07690 Major Facilitator Superfamily CAB88_00465 PF01820 D-ala D-ala ligase N-terminus CAB88_00465 PF07478 D-ala D-ala ligase C-terminus CAB88_00470 PF02875 Mur ligase family, glutamate ligase domain CAB88_00470 PF08245 Mur ligase middle domain CAB88_00470 PF01225 Mur ligase family, catalytic domain CAB88_00475 PF00271 Helicase conserved C-terminal domain CAB88_00475 PF00270 DEAD/DEAH box helicase CAB88_00480 PF03851 UV-endonuclease UvdE CAB88_00485 PF01694 Rhomboid family CAB88_00490 PF01648 4'-phosphopantetheinyl transferase superfamily CAB88_00500 PF00842 Alanine racemase, C-terminal domain CAB88_00500 PF01168 Alanine racemase, N-terminal domain CAB88_00505 PF01402 Ribbon-helix-helix protein, copG family CAB88_00510 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system CAB88_00515 PF00575 S1 RNA binding domain CAB88_00515 PF09371 Tex-like protein N-terminal domain CAB88_00515 PF16921 Tex protein YqgF-like domain CAB88_00515 PF17674 HHH domain CAB88_00525 PF10263 SprT-like family CAB88_00525 PF17283 SprT-like zinc ribbon domain CAB88_00615 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE CAB88_00620 PF00814 Glycoprotease family CAB88_00625 PF00583 Acetyltransferase (GNAT) family CAB88_00630 PF00814 Glycoprotease family CAB88_00635 PF00005 ABC transporter CAB88_00635 PF16326 ABC transporter C-terminal domain CAB88_00635 PF12848 ABC transporter CAB88_00640 PF06971 Putative DNA-binding protein N-terminus CAB88_00640 PF02629 CoA binding domain CAB88_00650 PF02517 CPBP intramembrane metalloprotease CAB88_00655 PF00166 Chaperonin 10 Kd subunit CAB88_00660 PF00118 TCP-1/cpn60 chaperonin family CAB88_00675 PF00117 Glutamine amidotransferase class-I CAB88_00675 PF00958 GMP synthase C terminal domain CAB88_00675 PF02540 NAD synthase CAB88_00680 PF00860 Permease family CAB88_00685 PF00486 Transcriptional regulatory protein, C terminal CAB88_00685 PF00072 Response regulator receiver domain CAB88_00690 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CAB88_00690 PF00512 His Kinase A (phospho-acceptor) domain CAB88_00690 PF16736 Single Cache-like CAB88_00690 PF00989 PAS fold CAB88_00715 PF01323 DSBA-like thioredoxin domain CAB88_00735 PF05045 Rhamnan synthesis protein F CAB88_00735 PF14307 Glycosyltransferase WbsX CAB88_00740 PF00665 Integrase core domain CAB88_00745 PF01695 IstB-like ATP binding protein CAB88_00750 PF14307 Glycosyltransferase WbsX CAB88_00750 PF05045 Rhamnan synthesis protein F CAB88_00770 PF01370 NAD dependent epimerase/dehydratase family CAB88_00780 PF00535 Glycosyl transferase family 2 CAB88_00800 PF00892 EamA-like transporter family CAB88_00830 PF00731 AIR carboxylase CAB88_00835 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain CAB88_00835 PF02222 ATP-grasp domain CAB88_00840 PF00206 Lyase CAB88_00840 PF10397 Adenylosuccinate lyase C-terminus CAB88_00845 PF01259 SAICAR synthetase CAB88_00850 PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase CAB88_00860 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain CAB88_00860 PF00586 AIR synthase related protein, N-terminal domain CAB88_00860 PF02769 AIR synthase related protein, C-terminal domain CAB88_00865 PF00156 Phosphoribosyl transferase domain CAB88_00870 PF00586 AIR synthase related protein, N-terminal domain CAB88_00870 PF02769 AIR synthase related protein, C-terminal domain CAB88_00875 PF00551 Formyl transferase CAB88_00880 PF02142 MGS-like domain CAB88_00880 PF01808 AICARFT/IMPCHase bienzyme CAB88_00885 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain CAB88_00885 PF02843 Phosphoribosylglycinamide synthetase, C domain CAB88_00885 PF02844 Phosphoribosylglycinamide synthetase, N domain CAB88_00895 PF03466 LysR substrate binding domain CAB88_00895 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CAB88_00915 PF01884 PcrB family CAB88_00920 PF00580 UvrD/REP helicase N-terminal domain CAB88_00920 PF13361 UvrD-like helicase C-terminal domain CAB88_00925 PF03120 NAD-dependent DNA ligase OB-fold domain CAB88_00925 PF03119 NAD-dependent DNA ligase C4 zinc finger domain CAB88_00925 PF01653 NAD-dependent DNA ligase adenylation domain CAB88_00925 PF12826 Helix-hairpin-helix motif CAB88_00925 PF00533 BRCA1 C Terminus (BRCT) domain CAB88_00930 PF07537 CamS sex pheromone cAM373 precursor CAB88_00935 PF01925 Sulfite exporter TauE/SafE CAB88_00940 PF00171 Aldehyde dehydrogenase family CAB88_00945 PF00857 Isochorismatase family CAB88_00950 PF09383 NIL domain CAB88_00950 PF00005 ABC transporter CAB88_00955 PF00528 Binding-protein-dependent transport system inner membrane component CAB88_00960 PF03180 NLPA lipoprotein CAB88_00975 PF17886 HSP20-like domain found in ArsA CAB88_00975 PF02374 Anion-transporting ATPase CAB88_00980 PF01047 MarR family CAB88_00985 PF05360 yiaA/B two helix domain CAB88_00990 PF02686 Glu-tRNAGln amidotransferase C subunit CAB88_00995 PF01425 Amidase CAB88_01000 PF02934 GatB/GatE catalytic domain CAB88_01000 PF02637 GatB domain CAB88_01005 PF00781 Diacylglycerol kinase catalytic domain CAB88_01010 PF13419 Haloacid dehalogenase-like hydrolase CAB88_01015 PF00202 Aminotransferase class-III CAB88_01020 PF00158 Sigma-54 interaction domain CAB88_01025 PF00171 Aldehyde dehydrogenase family CAB88_01030 PF00893 Small Multidrug Resistance protein CAB88_01040 PF02073 Thermophilic metalloprotease (M29) CAB88_01055 PF07670 Nucleoside recognition CAB88_01055 PF07662 Na+ dependent nucleoside transporter C-terminus CAB88_01055 PF01773 Na+ dependent nucleoside transporter N-terminus CAB88_01060 PF13847 Methyltransferase domain CAB88_01060 PF05958 tRNA (Uracil-5-)-methyltransferase CAB88_01060 PF01938 TRAM domain CAB88_01065 PF01207 Dihydrouridine synthase (Dus) CAB88_01070 PF07308 Protein of unknown function (DUF1456) CAB88_01085 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain CAB88_01085 PF13378 Enolase C-terminal domain-like CAB88_01100 PF01546 Peptidase family M20/M25/M40 CAB88_01100 PF07687 Peptidase dimerisation domain CAB88_01115 PF07992 Pyridine nucleotide-disulphide oxidoreductase CAB88_01115 PF13192 Thioredoxin domain CAB88_01120 PF00578 AhpC/TSA family CAB88_01125 PF01636 Phosphotransferase enzyme family CAB88_01135 PF00596 Class II Aldolase and Adducin N-terminal domain CAB88_01140 PF01032 FecCD transport family CAB88_01145 PF01032 FecCD transport family CAB88_01150 PF01497 Periplasmic binding protein CAB88_01175 PF12728 Helix-turn-helix domain CAB88_01205 PF00512 His Kinase A (phospho-acceptor) domain CAB88_01205 PF00989 PAS fold CAB88_01205 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CAB88_01205 PF13188 PAS domain CAB88_01205 PF13426 PAS domain CAB88_01225 PF10127 RNA repair pathway DNA polymerase beta family CAB88_01230 PF07690 Major Facilitator Superfamily CAB88_01235 PF01266 FAD dependent oxidoreductase CAB88_01235 PF00355 Rieske [2Fe-2S] domain CAB88_01245 PF00528 Binding-protein-dependent transport system inner membrane component CAB88_01250 PF00497 Bacterial extracellular solute-binding proteins, family 3 CAB88_01255 PF00005 ABC transporter CAB88_01260 PF00672 HAMP domain CAB88_01260 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CAB88_01260 PF12729 Four helix bundle sensory module for signal transduction CAB88_01265 PF02863 Arginine repressor, C-terminal domain CAB88_01265 PF01316 Arginine repressor, DNA binding domain CAB88_01275 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain CAB88_01275 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain CAB88_01280 PF13520 Amino acid permease CAB88_01285 PF00696 Amino acid kinase family CAB88_01290 PF00027 Cyclic nucleotide-binding domain CAB88_01290 PF13545 Crp-like helix-turn-helix domain CAB88_01300 PF08031 Berberine and berberine like CAB88_01300 PF01565 FAD binding domain CAB88_01305 PF00128 Alpha amylase, catalytic domain CAB88_01305 PF16657 Maltogenic Amylase, C-terminal domain CAB88_01310 PF02378 Phosphotransferase system, EIIC CAB88_01310 PF00367 phosphotransferase system, EIIB CAB88_01310 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 CAB88_01315 PF03372 Endonuclease/Exonuclease/phosphatase family CAB88_01320 PF01061 ABC-2 type transporter CAB88_01325 PF01751 Toprim domain CAB88_01325 PF01131 DNA topoisomerase CAB88_01330 PF02110 Hydroxyethylthiazole kinase family CAB88_01335 PF02581 Thiamine monophosphate synthase CAB88_01340 PF03605 Anaerobic c4-dicarboxylate membrane transporter CAB88_01345 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CAB88_01345 PF00672 HAMP domain CAB88_01350 PF00668 Condensation domain CAB88_01350 PF00501 AMP-binding enzyme CAB88_01350 PF13193 AMP-binding enzyme C-terminal domain CAB88_01350 PF00550 Phosphopantetheine attachment site CAB88_01355 PF01910 Thiamine-binding protein CAB88_01360 PF00528 Binding-protein-dependent transport system inner membrane component CAB88_01370 PF00005 ABC transporter CAB88_01375 PF00005 ABC transporter CAB88_01375 PF12848 ABC transporter CAB88_01380 PF00704 Glycosyl hydrolases family 18 CAB88_01380 PF00041 Fibronectin type III domain CAB88_01410 PF08360 QacR-like protein, C-terminal region CAB88_01410 PF00440 Bacterial regulatory proteins, tetR family CAB88_01425 PF11700 Vacuole effluxer Atg22 like CAB88_01440 PF09180 Prolyl-tRNA synthetase, C-terminal CAB88_01440 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CAB88_01440 PF03129 Anticodon binding domain CAB88_01450 PF00480 ROK family CAB88_01455 PF02342 TerD domain CAB88_01460 PF02342 TerD domain CAB88_01465 PF02342 TerD domain CAB88_01470 PF03741 Integral membrane protein TerC family CAB88_01475 PF14266 Putative component of 'biosynthetic module' CAB88_01480 PF05816 Toxic anion resistance protein (TelA) CAB88_01485 PF00689 Cation transporting ATPase, C-terminus CAB88_01485 PF00690 Cation transporter/ATPase, N-terminus CAB88_01490 PF06569 Protein of unknown function (DUF1128) CAB88_01495 PF01451 Low molecular weight phosphotyrosine protein phosphatase CAB88_01505 PF03631 Virulence factor BrkB CAB88_01520 PF00892 EamA-like transporter family CAB88_01530 PF10502 Signal peptidase, peptidase S26 CAB88_01540 PF09335 SNARE associated Golgi protein CAB88_01555 PF16242 Pyridoxamine 5'-phosphate oxidase like CAB88_01560 PF01699 Sodium/calcium exchanger protein CAB88_01565 PF14167 YfkD-like protein CAB88_01570 PF08756 YfkB-like domain CAB88_01570 PF04055 Radical SAM superfamily CAB88_01580 PF05681 Fumarate hydratase (Fumerase) CAB88_01580 PF05683 Fumarase C-terminus CAB88_01585 PF01522 Polysaccharide deacetylase CAB88_01590 PF00730 HhH-GPD superfamily base excision DNA repair protein CAB88_01595 PF05958 tRNA (Uracil-5-)-methyltransferase CAB88_01595 PF01938 TRAM domain CAB88_01600 PF01416 tRNA pseudouridine synthase CAB88_01610 PF02954 Bacterial regulatory protein, Fis family CAB88_01610 PF00158 Sigma-54 interaction domain CAB88_01610 PF13426 PAS domain CAB88_01620 PF00324 Amino acid permease CAB88_01625 PF07687 Peptidase dimerisation domain CAB88_01625 PF01546 Peptidase family M20/M25/M40 CAB88_01650 PF04960 Glutaminase CAB88_01655 PF00367 phosphotransferase system, EIIB CAB88_01655 PF02378 Phosphotransferase system, EIIC CAB88_01660 PF00144 Beta-lactamase CAB88_01675 PF00535 Glycosyl transferase family 2 CAB88_01680 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain CAB88_01680 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain CAB88_01680 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain CAB88_01685 PF02911 Formyl transferase, C-terminal domain CAB88_01685 PF01370 NAD dependent epimerase/dehydratase family CAB88_01685 PF00551 Formyl transferase CAB88_01690 PF00535 Glycosyl transferase family 2 CAB88_01700 PF01228 Glycine radical CAB88_01700 PF02901 Pyruvate formate lyase-like CAB88_01705 PF04055 Radical SAM superfamily CAB88_01710 PF04101 Glycosyltransferase family 28 C-terminal domain CAB88_01710 PF06925 Monogalactosyldiacylglycerol (MGDG) synthase CAB88_01725 PF01979 Amidohydrolase family CAB88_01730 PF08338 Domain of unknown function (DUF1731) CAB88_01730 PF01370 NAD dependent epimerase/dehydratase family CAB88_01735 PF02631 RecX family CAB88_01750 PF08176 Small acid-soluble spore protein K family CAB88_01755 PF14043 WVELL protein CAB88_01760 PF04307 LexA-binding, inner membrane-associated putative hydrolase CAB88_01765 PF14815 NUDIX domain CAB88_01765 PF00730 HhH-GPD superfamily base excision DNA repair protein CAB88_01775 PF04259 Small, acid-soluble spore protein, gamma-type CAB88_01780 PF14182 YgaB-like protein CAB88_01790 PF00005 ABC transporter CAB88_01790 PF00664 ABC transporter transmembrane region CAB88_01795 PF06081 Aromatic acid exporter family member 1 CAB88_01800 PF01493 GXGXG motif CAB88_01800 PF01645 Conserved region in glutamate synthase CAB88_01800 PF04898 Glutamate synthase central domain CAB88_01800 PF00310 Glutamine amidotransferases class-II CAB88_01805 PF00202 Aminotransferase class-III CAB88_01810 PF00005 ABC transporter CAB88_01825 PF07885 Ion channel CAB88_01830 PF00578 AhpC/TSA family CAB88_01835 PF01475 Ferric uptake regulator family CAB88_01845 PF11023 Zinc-ribbon containing domain CAB88_01950 PF01709 Transcriptional regulator CAB88_01955 PF13344 Haloacid dehalogenase-like hydrolase CAB88_01955 PF00293 NUDIX domain CAB88_01960 PF00912 Transglycosylase CAB88_01960 PF00905 Penicillin binding protein transpeptidase domain CAB88_01965 PF13462 Thioredoxin CAB88_01975 PF08331 Domain of unknown function (DUF1730) CAB88_01980 PF12671 Putative amidase domain CAB88_01985 PF00588 SpoU rRNA Methylase family CAB88_01990 PF00990 Diguanylate cyclase, GGDEF domain CAB88_01990 PF03707 Bacterial signalling protein N terminal repeat CAB88_01990 PF00563 EAL domain CAB88_02000 PF08298 PrkA AAA domain CAB88_02000 PF06798 PrkA serine protein kinase C-terminal domain CAB88_02010 PF04285 Protein of unknown function (DUF444) CAB88_02025 PF02028 BCCT, betaine/carnitine/choline family transporter CAB88_02030 PF18496 Collagenase G catalytic helper subdomain CAB88_02030 PF01752 Collagenase CAB88_02030 PF08453 Peptidase family M9 N-terminal CAB88_02040 PF15975 Flotillin CAB88_02040 PF01145 SPFH domain / Band 7 family CAB88_02045 PF00672 HAMP domain CAB88_02045 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CAB88_02045 PF02743 Cache domain CAB88_02050 PF00989 PAS fold CAB88_02050 PF17203 Single cache domain 3 CAB88_02050 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain CAB88_02050 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CAB88_02055 PF12431 Transcriptional regulator CAB88_02055 PF00072 Response regulator receiver domain CAB88_02060 PF03600 Citrate transporter CAB88_02085 PF04309 Glycerol-3-phosphate responsive antiterminator CAB88_02090 PF17912 MalK OB fold domain CAB88_02090 PF00005 ABC transporter CAB88_02095 PF00528 Binding-protein-dependent transport system inner membrane component CAB88_02100 PF00528 Binding-protein-dependent transport system inner membrane component CAB88_02105 PF13416 Bacterial extracellular solute-binding protein CAB88_02110 PF00149 Calcineurin-like phosphoesterase CAB88_02115 PF00486 Transcriptional regulatory protein, C terminal CAB88_02115 PF00072 Response regulator receiver domain CAB88_02120 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CAB88_02120 PF00512 His Kinase A (phospho-acceptor) domain CAB88_02130 PF13529 Peptidase_C39 like family CAB88_02135 PF00672 HAMP domain CAB88_02135 PF02743 Cache domain CAB88_02135 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CAB88_02140 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CAB88_02140 PF17203 Single cache domain 3 CAB88_02140 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain CAB88_02140 PF00989 PAS fold CAB88_02145 PF00072 Response regulator receiver domain CAB88_02150 PF03390 2-hydroxycarboxylate transporter family CAB88_02155 PF03949 Malic enzyme, NAD binding domain CAB88_02155 PF00390 Malic enzyme, N-terminal domain CAB88_02165 PF00892 EamA-like transporter family CAB88_02170 PF00155 Aminotransferase class I and II CAB88_02170 PF00392 Bacterial regulatory proteins, gntR family CAB88_02180 PF00672 HAMP domain CAB88_02180 PF00989 PAS fold CAB88_02180 PF00512 His Kinase A (phospho-acceptor) domain CAB88_02180 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CAB88_02180 PF18698 Histidine kinase sensor domain CAB88_02185 PF00486 Transcriptional regulatory protein, C terminal CAB88_02185 PF00072 Response regulator receiver domain CAB88_02195 PF00583 Acetyltransferase (GNAT) family CAB88_02195 PF13508 Acetyltransferase (GNAT) domain CAB88_02200 PF02634 FdhD/NarQ family CAB88_02205 PF00037 4Fe-4S binding domain CAB88_02205 PF01568 Molydopterin dinucleotide binding domain CAB88_02205 PF00384 Molybdopterin oxidoreductase CAB88_02205 PF04879 Molybdopterin oxidoreductase Fe4S4 domain CAB88_02205 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region CAB88_02210 PF07849 Protein of unknown function (DUF1641) CAB88_02220 PF05222 Alanine dehydrogenase/PNT, N-terminal domain CAB88_02220 PF01262 Alanine dehydrogenase/PNT, C-terminal domain CAB88_02225 PF13520 Amino acid permease CAB88_02230 PF01022 Bacterial regulatory protein, arsR family CAB88_02235 PF00403 Heavy-metal-associated domain CAB88_02240 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain CAB88_02240 PF17956 Nicotinate phosphoribosyltransferase C-terminal domain CAB88_02240 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family CAB88_02255 PF03413 Peptidase propeptide and YPEB domain CAB88_02255 PF01447 Thermolysin metallopeptidase, catalytic domain CAB88_02255 PF02868 Thermolysin metallopeptidase, alpha-helical domain CAB88_02255 PF07504 Fungalysin/Thermolysin Propeptide Motif CAB88_02275 PF04294 VanW like protein CAB88_02280 PF03816 Cell envelope-related transcriptional attenuator domain CAB88_02285 PF01773 Na+ dependent nucleoside transporter N-terminus CAB88_02285 PF07662 Na+ dependent nucleoside transporter C-terminus CAB88_02290 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CAB88_02295 PF02371 Transposase IS116/IS110/IS902 family CAB88_02295 PF01548 Transposase CAB88_02300 PF01595 Cyclin M transmembrane N-terminal domain CAB88_02300 PF03471 Transporter associated domain CAB88_02300 PF00571 CBS domain CAB88_02305 PF00206 Lyase CAB88_02305 PF10415 Fumarase C C-terminus CAB88_02310 PF02652 L-lactate permease CAB88_02320 PF01022 Bacterial regulatory protein, arsR family CAB88_02325 PF08141 Small acid-soluble spore protein H family CAB88_02330 PF00854 POT family CAB88_02335 PF01497 Periplasmic binding protein CAB88_02340 PF01032 FecCD transport family CAB88_02345 PF01032 FecCD transport family CAB88_02350 PF00005 ABC transporter CAB88_02365 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) CAB88_02370 PF00155 Aminotransferase class I and II CAB88_02375 PF01370 NAD dependent epimerase/dehydratase family CAB88_02380 PF13344 Haloacid dehalogenase-like hydrolase CAB88_02380 PF00293 NUDIX domain CAB88_02385 PF00092 von Willebrand factor type A domain CAB88_02390 PF07728 AAA domain (dynein-related subfamily) CAB88_02395 PF13396 Phospholipase_D-nuclease N-terminal CAB88_02395 PF13091 PLD-like domain CAB88_02410 PF03707 Bacterial signalling protein N terminal repeat CAB88_02410 PF00990 Diguanylate cyclase, GGDEF domain CAB88_02410 PF00563 EAL domain CAB88_02415 PF13520 Amino acid permease CAB88_02420 PF07702 UTRA domain CAB88_02420 PF00392 Bacterial regulatory proteins, gntR family CAB88_02425 PF02378 Phosphotransferase system, EIIC CAB88_02425 PF00367 phosphotransferase system, EIIB CAB88_02430 PF00128 Alpha amylase, catalytic domain CAB88_02430 PF16657 Maltogenic Amylase, C-terminal domain CAB88_02450 PF03323 Bacillus/Clostridium GerA spore germination protein CAB88_02460 PF01636 Phosphotransferase enzyme family CAB88_02465 PF01235 Sodium:alanine symporter family CAB88_02470 PF00005 ABC transporter CAB88_02475 PF00497 Bacterial extracellular solute-binding proteins, family 3 CAB88_02480 PF00528 Binding-protein-dependent transport system inner membrane component CAB88_02485 PF00528 Binding-protein-dependent transport system inner membrane component CAB88_02490 PF00324 Amino acid permease CAB88_02505 PF04542 Sigma-70 region 2 CAB88_02505 PF08281 Sigma-70, region 4 CAB88_02515 PF13280 WYL domain CAB88_02515 PF08279 HTH domain CAB88_02520 PF01872 RibD C-terminal domain CAB88_02525 PF00989 PAS fold CAB88_02525 PF00512 His Kinase A (phospho-acceptor) domain CAB88_02525 PF18698 Histidine kinase sensor domain CAB88_02525 PF00672 HAMP domain CAB88_02525 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CAB88_02530 PF00072 Response regulator receiver domain CAB88_02530 PF00486 Transcriptional regulatory protein, C terminal CAB88_02550 PF00916 Sulfate permease family CAB88_02550 PF01740 STAS domain CAB88_02555 PF00582 Universal stress protein family CAB88_02565 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CAB88_02570 PF00528 Binding-protein-dependent transport system inner membrane component CAB88_02575 PF00528 Binding-protein-dependent transport system inner membrane component CAB88_02580 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CAB88_02580 PF00005 ABC transporter CAB88_02585 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CAB88_02585 PF00005 ABC transporter CAB88_02590 PF07690 Major Facilitator Superfamily CAB88_02595 PF01047 MarR family CAB88_02600 PF07690 Major Facilitator Superfamily CAB88_02605 PF00356 Bacterial regulatory proteins, lacI family CAB88_02610 PF00294 pfkB family carbohydrate kinase CAB88_02615 PF05025 RbsD / FucU transport protein family CAB88_02620 PF00005 ABC transporter CAB88_02625 PF02653 Branched-chain amino acid transport system / permease component CAB88_02630 PF13407 Periplasmic binding protein domain CAB88_02635 PF00923 Transaldolase/Fructose-6-phosphate aldolase CAB88_02640 PF05547 Immune inhibitor A peptidase M6 CAB88_02655 PF00107 Zinc-binding dehydrogenase CAB88_02655 PF08240 Alcohol dehydrogenase GroES-like domain CAB88_02665 PF00882 Zinc dependent phospholipase C CAB88_02670 PF03372 Endonuclease/Exonuclease/phosphatase family CAB88_02675 PF00589 Phage integrase family CAB88_02685 PF01381 Helix-turn-helix CAB88_02725 PF09588 YqaJ-like viral recombinase domain CAB88_02730 PF03837 RecT family CAB88_02745 PF01695 IstB-like ATP binding protein CAB88_02775 PF04545 Sigma-70, region 4 CAB88_02775 PF04542 Sigma-70 region 2 CAB88_02775 PF00140 Sigma-70 factor, region 1.2 CAB88_02785 PF10548 P22AR C-terminal domain CAB88_02785 PF02498 BRO family, N-terminal domain CAB88_02810 PF00239 Resolvase, N terminal domain CAB88_02810 PF02796 Helix-turn-helix domain of resolvase CAB88_02905 PF01471 Putative peptidoglycan binding domain CAB88_02905 PF01510 N-acetylmuramoyl-L-alanine amidase CAB88_02905 PF01476 LysM domain CAB88_02925 PF01580 FtsK/SpoIIIE family CAB88_02925 PF09397 Ftsk gamma domain CAB88_02925 PF17854 FtsK alpha domain CAB88_02945 PF04030 D-arabinono-1,4-lactone oxidase CAB88_02945 PF01565 FAD binding domain CAB88_02965 PF02673 Bacitracin resistance protein BacA CAB88_02970 PF02743 Cache domain CAB88_02970 PF00672 HAMP domain CAB88_02970 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CAB88_02975 PF01476 LysM domain CAB88_02975 PF06725 3D domain CAB88_02980 PF01381 Helix-turn-helix CAB88_02990 PF04203 Sortase domain CAB88_03000 PF00854 POT family CAB88_03005 PF05525 Branched-chain amino acid transport protein CAB88_03020 PF00324 Amino acid permease CAB88_03025 PF00860 Permease family CAB88_03040 PF13673 Acetyltransferase (GNAT) domain CAB88_03050 PF00999 Sodium/hydrogen exchanger family CAB88_03050 PF02080 TrkA-C domain CAB88_03050 PF02254 TrkA-N domain CAB88_03060 PF00510 Cytochrome c oxidase subunit III CAB88_03065 PF00115 Cytochrome C and Quinol oxidase polypeptide I CAB88_03070 PF02790 Cytochrome C oxidase subunit II, transmembrane domain CAB88_03075 PF00324 Amino acid permease CAB88_03080 PF13529 Peptidase_C39 like family CAB88_03085 PF01546 Peptidase family M20/M25/M40 CAB88_03085 PF07687 Peptidase dimerisation domain CAB88_03090 PF11755 Protein of unknown function (DUF3311) CAB88_03095 PF00474 Sodium:solute symporter family CAB88_03100 PF03323 Bacillus/Clostridium GerA spore germination protein CAB88_03105 PF03845 Spore germination protein CAB88_03110 PF05504 Spore germination B3/ GerAC like, C-terminal CAB88_03115 PF00665 Integrase core domain CAB88_03120 PF01695 IstB-like ATP binding protein CAB88_03125 PF05504 Spore germination B3/ GerAC like, C-terminal CAB88_03135 PF07670 Nucleoside recognition CAB88_03135 PF07664 Ferrous iron transport protein B C terminus CAB88_03135 PF17910 FeoB cytosolic helical domain CAB88_03135 PF02421 Ferrous iron transport protein B CAB88_03140 PF07670 Nucleoside recognition CAB88_03140 PF07664 Ferrous iron transport protein B C terminus CAB88_03140 PF17910 FeoB cytosolic helical domain CAB88_03140 PF02421 Ferrous iron transport protein B CAB88_03145 PF02421 Ferrous iron transport protein B CAB88_03145 PF17910 FeoB cytosolic helical domain CAB88_03145 PF07670 Nucleoside recognition CAB88_03145 PF07664 Ferrous iron transport protein B C terminus CAB88_03145 PF04023 FeoA domain CAB88_03150 PF12849 PBP superfamily domain CAB88_03155 PF00528 Binding-protein-dependent transport system inner membrane component CAB88_03160 PF00528 Binding-protein-dependent transport system inner membrane component CAB88_03170 PF00873 AcrB/AcrD/AcrF family CAB88_03295 PF00571 CBS domain CAB88_03315 PF08239 Bacterial SH3 domain CAB88_03315 PF00246 Zinc carboxypeptidase CAB88_03320 PF03070 TENA/THI-4/PQQC family CAB88_03325 PF00005 ABC transporter CAB88_03330 PF00528 Binding-protein-dependent transport system inner membrane component CAB88_03335 PF09084 NMT1/THI5 like CAB88_03340 PF02581 Thiamine monophosphate synthase CAB88_03345 PF01266 FAD dependent oxidoreductase CAB88_03350 PF02597 ThiS family CAB88_03355 PF05690 Thiazole biosynthesis protein ThiG CAB88_03360 PF00899 ThiF family CAB88_03365 PF08543 Phosphomethylpyrimidine kinase CAB88_03390 PF03814 Potassium-transporting ATPase A subunit CAB88_03400 PF02669 K+-transporting ATPase, c chain CAB88_03405 PF02702 Osmosensitive K+ channel His kinase sensor domain CAB88_03410 PF07690 Major Facilitator Superfamily CAB88_03415 PF01047 MarR family CAB88_03430 PF00860 Permease family CAB88_03440 PF03734 L,D-transpeptidase catalytic domain CAB88_03440 PF17969 L,D-transpeptidase C-terminal domain CAB88_03450 PF00294 pfkB family carbohydrate kinase CAB88_03455 PF00251 Glycosyl hydrolases family 32 N-terminal domain CAB88_03455 PF08244 Glycosyl hydrolases family 32 C terminal CAB88_03460 PF00367 phosphotransferase system, EIIB CAB88_03460 PF02378 Phosphotransferase system, EIIC CAB88_03465 PF13407 Periplasmic binding protein domain CAB88_03465 PF00356 Bacterial regulatory proteins, lacI family CAB88_03475 PF00085 Thioredoxin CAB88_03480 PF02600 Disulfide bond formation protein DsbB CAB88_03485 PF14148 YhdB-like protein CAB88_03495 PF03845 Spore germination protein CAB88_03505 PF03323 Bacillus/Clostridium GerA spore germination protein CAB88_03515 PF00881 Nitroreductase family CAB88_03520 PF04293 SpoVR like protein CAB88_03530 PF01614 Bacterial transcriptional regulator CAB88_03530 PF09339 IclR helix-turn-helix domain CAB88_03550 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CAB88_03550 PF07992 Pyridine nucleotide-disulphide oxidoreductase CAB88_03555 PF02583 Metal-sensitive transcriptional repressor CAB88_03560 PF01206 Sulfurtransferase TusA CAB88_03560 PF00581 Rhodanese-like domain CAB88_03565 PF00753 Metallo-beta-lactamase superfamily CAB88_03565 PF00581 Rhodanese-like domain CAB88_03570 PF01206 Sulfurtransferase TusA CAB88_03575 PF00581 Rhodanese-like domain CAB88_03585 PF13686 DsrE/DsrF/DrsH-like family CAB88_03590 PF01925 Sulfite exporter TauE/SafE CAB88_03600 PF03816 Cell envelope-related transcriptional attenuator domain CAB88_03605 PF00107 Zinc-binding dehydrogenase CAB88_03605 PF08240 Alcohol dehydrogenase GroES-like domain CAB88_03610 PF02690 Na+/Pi-cotransporter CAB88_03615 PF07690 Major Facilitator Superfamily CAB88_03630 PF08279 HTH domain CAB88_03630 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CAB88_03630 PF00874 PRD domain CAB88_03630 PF05043 Mga helix-turn-helix domain CAB88_03635 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit CAB88_03640 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CAB88_03645 PF02378 Phosphotransferase system, EIIC CAB88_03660 PF06725 3D domain CAB88_03660 PF01476 LysM domain CAB88_03665 PF02687 FtsX-like permease family CAB88_03665 PF12704 MacB-like periplasmic core domain CAB88_03670 PF00005 ABC transporter CAB88_03680 PF09529 Integral membrane protein (intg_mem_TP0381) CAB88_03695 PF05525 Branched-chain amino acid transport protein CAB88_03700 PF05067 Manganese containing catalase CAB88_03705 PF12652 CotJB protein CAB88_03710 PF11007 Spore coat associated protein JA (CotJA) CAB88_03725 PF02735 Ku70/Ku80 beta-barrel domain CAB88_03735 PF09335 SNARE associated Golgi protein CAB88_03770 PF13520 Amino acid permease CAB88_03775 PF00999 Sodium/hydrogen exchanger family CAB88_03785 PF01418 Helix-turn-helix domain, rpiR family CAB88_03785 PF01380 SIS domain CAB88_03790 PF13580 SIS domain CAB88_03795 PF02378 Phosphotransferase system, EIIC CAB88_03795 PF00367 phosphotransferase system, EIIB CAB88_03805 PF07681 DoxX CAB88_03820 PF00892 EamA-like transporter family CAB88_03825 PF01037 Lrp/AsnC ligand binding domain CAB88_03830 PF00583 Acetyltransferase (GNAT) family CAB88_03830 PF14698 Argininosuccinate lyase C-terminal CAB88_03830 PF00206 Lyase CAB88_03835 PF00106 short chain dehydrogenase CAB88_03840 PF13411 MerR HTH family regulatory protein CAB88_03845 PF00893 Small Multidrug Resistance protein CAB88_03855 PF00440 Bacterial regulatory proteins, tetR family CAB88_03855 PF17934 Tetracyclin repressor-like, C-terminal domain CAB88_03860 PF07690 Major Facilitator Superfamily CAB88_03865 PF01638 HxlR-like helix-turn-helix CAB88_03875 PF02525 Flavodoxin-like fold CAB88_03880 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CAB88_03880 PF12793 Sugar transport-related sRNA regulator N-term CAB88_03885 PF07690 Major Facilitator Superfamily CAB88_03895 PF01965 DJ-1/PfpI family CAB88_03900 PF18011 C-terminal domain found in long catalases CAB88_03900 PF00199 Catalase CAB88_03900 PF06628 Catalase-related immune-responsive CAB88_03910 PF13520 Amino acid permease CAB88_03915 PF01177 Asp/Glu/Hydantoin racemase CAB88_03925 PF00171 Aldehyde dehydrogenase family CAB88_03945 PF00664 ABC transporter transmembrane region CAB88_03945 PF00005 ABC transporter CAB88_03950 PF00005 ABC transporter CAB88_03950 PF00664 ABC transporter transmembrane region CAB88_03960 PF00497 Bacterial extracellular solute-binding proteins, family 3 CAB88_03965 PF00528 Binding-protein-dependent transport system inner membrane component CAB88_03970 PF00005 ABC transporter CAB88_03975 PF00269 Small, acid-soluble spore proteins, alpha/beta type CAB88_03985 PF14398 YheC/D like ATP-grasp CAB88_03995 PF04286 Protein of unknown function (DUF445) CAB88_04000 PF06133 Control of competence regulator ComK, YlbF/YmcA CAB88_04020 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CAB88_04020 PF00205 Thiamine pyrophosphate enzyme, central domain CAB88_04020 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CAB88_04025 PF03306 Alpha-acetolactate decarboxylase CAB88_04035 PF02245 Methylpurine-DNA glycosylase (MPG) CAB88_04045 PF10425 C-terminus of bacterial fibrinogen-binding adhesin CAB88_04045 PF17210 SdrD B-like domain CAB88_04045 PF17961 Bacterial Ig domain CAB88_04045 PF00746 LPXTG cell wall anchor motif CAB88_04045 PF04650 YSIRK type signal peptide CAB88_04050 PF01471 Putative peptidoglycan binding domain CAB88_04050 PF01510 N-acetylmuramoyl-L-alanine amidase CAB88_04055 PF04055 Radical SAM superfamily CAB88_04060 PF00501 AMP-binding enzyme CAB88_04060 PF13193 AMP-binding enzyme C-terminal domain CAB88_04075 PF00916 Sulfate permease family CAB88_04075 PF01740 STAS domain CAB88_04080 PF01943 Polysaccharide biosynthesis protein CAB88_04080 PF14667 Polysaccharide biosynthesis C-terminal domain CAB88_04105 PF00378 Enoyl-CoA hydratase/isomerase CAB88_04125 PF05343 M42 glutamyl aminopeptidase CAB88_04130 PF01520 N-acetylmuramoyl-L-alanine amidase CAB88_04130 PF00395 S-layer homology domain CAB88_04140 PF11121 Protein of unknown function (DUF2639) CAB88_04145 PF05544 Proline racemase CAB88_04150 PF02423 Ornithine cyclodeaminase/mu-crystallin family CAB88_04160 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CAB88_04165 PF00528 Binding-protein-dependent transport system inner membrane component CAB88_04170 PF00528 Binding-protein-dependent transport system inner membrane component CAB88_04170 PF12911 N-terminal TM domain of oligopeptide transport permease C CAB88_04175 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CAB88_04175 PF00005 ABC transporter CAB88_04180 PF00005 ABC transporter CAB88_04180 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CAB88_04210 PF16123 Hydroxyacylglutathione hydrolase C-terminus CAB88_04210 PF00753 Metallo-beta-lactamase superfamily CAB88_04235 PF00083 Sugar (and other) transporter CAB88_04240 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain CAB88_04240 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CAB88_04245 PF12431 Transcriptional regulator CAB88_04245 PF00072 Response regulator receiver domain CAB88_04245 PF08279 HTH domain CAB88_04250 PF03401 Tripartite tricarboxylate transporter family receptor CAB88_04255 PF00293 NUDIX domain CAB88_04260 PF13588 Type I restriction enzyme R protein N terminus (HSDR_N) CAB88_04260 PF04851 Type III restriction enzyme, res subunit CAB88_04260 PF08463 EcoEI R protein C-terminal CAB88_04260 PF00271 Helicase conserved C-terminal domain CAB88_04270 PF00772 DnaB-like helicase N terminal domain CAB88_04270 PF03796 DnaB-like helicase C terminal domain CAB88_04285 PF01925 Sulfite exporter TauE/SafE CAB88_04310 PF07690 Major Facilitator Superfamily CAB88_04320 PF09680 Family of unknown function CAB88_04345 PF12146 Serine aminopeptidase, S33 CAB88_04345 PF13026 Protein of unknown function (DUF3887) CAB88_04400 PF01066 CDP-alcohol phosphatidyltransferase CAB88_04415 PF07690 Major Facilitator Superfamily CAB88_04435 PF02733 Dak1 domain CAB88_04445 PF02733 Dak1 domain CAB88_04480 PF01695 IstB-like ATP binding protein CAB88_04485 PF00665 Integrase core domain CAB88_04495 PF18801 response regulator aspartate phosphatase H, N terminal CAB88_04505 PF00395 S-layer homology domain CAB88_04540 PF12697 Alpha/beta hydrolase family CAB88_04565 PF11181 Heat induced stress protein YflT CAB88_04570 PF05532 CsbD-like CAB88_04590 PF01740 STAS domain CAB88_04595 PF13581 Histidine kinase-like ATPase domain CAB88_04600 PF04545 Sigma-70, region 4 CAB88_04600 PF04539 Sigma-70 region 3 CAB88_04600 PF04542 Sigma-70 region 2 CAB88_04610 PF13426 PAS domain CAB88_04610 PF07228 Stage II sporulation protein E (SpoIIE) CAB88_04615 PF01739 CheR methyltransferase, SAM binding domain CAB88_04615 PF03705 CheR methyltransferase, all-alpha domain CAB88_04620 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CAB88_04620 PF00512 His Kinase A (phospho-acceptor) domain CAB88_04620 PF01627 Hpt domain CAB88_04620 PF00072 Response regulator receiver domain CAB88_04620 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) CAB88_04620 PF00672 HAMP domain CAB88_04645 PF01906 Putative heavy-metal-binding CAB88_04660 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) CAB88_04665 PF00107 Zinc-binding dehydrogenase CAB88_04665 PF08240 Alcohol dehydrogenase GroES-like domain CAB88_04670 PF02275 Linear amide C-N hydrolases, choloylglycine hydrolase family CAB88_04675 PF11121 Protein of unknown function (DUF2639) CAB88_04690 PF00149 Calcineurin-like phosphoesterase CAB88_04695 PF13514 AAA domain CAB88_04700 PF01336 OB-fold nucleic acid binding domain CAB88_04700 PF01966 HD domain CAB88_04715 PF01810 LysE type translocator CAB88_04720 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CAB88_04725 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CAB88_04735 PF17874 MalT-like TPR region CAB88_04735 PF18801 response regulator aspartate phosphatase H, N terminal CAB88_04745 PF08386 TAP-like protein CAB88_04745 PF00561 alpha/beta hydrolase fold CAB88_04750 PF14147 Sporulation protein YhaL CAB88_04770 PF00190 Cupin CAB88_04775 PF01381 Helix-turn-helix CAB88_04780 PF04309 Glycerol-3-phosphate responsive antiterminator CAB88_04785 PF00230 Major intrinsic protein CAB88_04790 PF00370 FGGY family of carbohydrate kinases, N-terminal domain CAB88_04790 PF02782 FGGY family of carbohydrate kinases, C-terminal domain CAB88_04795 PF01266 FAD dependent oxidoreductase CAB88_04795 PF16901 C-terminal domain of alpha-glycerophosphate oxidase CAB88_04800 PF03551 Transcriptional regulator PadR-like family CAB88_04815 PF08281 Sigma-70, region 4 CAB88_04815 PF04542 Sigma-70 region 2 CAB88_04830 PF13538 UvrD-like helicase C-terminal domain CAB88_04860 PF01047 MarR family CAB88_04865 PF12732 YtxH-like protein CAB88_04870 PF01230 HIT domain CAB88_04880 PF00005 ABC transporter CAB88_04885 PF05975 Bacterial ABC transporter protein EcsB CAB88_04890 PF12787 EcsC protein family CAB88_04930 PF17934 Tetracyclin repressor-like, C-terminal domain CAB88_04930 PF00440 Bacterial regulatory proteins, tetR family CAB88_04940 PF03703 Bacterial PH domain CAB88_04945 PF03703 Bacterial PH domain CAB88_04980 PF10014 2OG-Fe dioxygenase CAB88_04990 PF00892 EamA-like transporter family CAB88_04995 PF03703 Bacterial PH domain CAB88_05000 PF03703 Bacterial PH domain CAB88_05005 PF03992 Antibiotic biosynthesis monooxygenase CAB88_05010 PF00912 Transglycosylase CAB88_05010 PF00905 Penicillin binding protein transpeptidase domain CAB88_05015 PF01208 Uroporphyrinogen decarboxylase (URO-D) CAB88_05050 PF03965 Penicillinase repressor CAB88_05060 PF00440 Bacterial regulatory proteins, tetR family CAB88_05060 PF17932 Tetracyclin repressor-like, C-terminal domain CAB88_05085 PF13302 Acetyltransferase (GNAT) domain CAB88_05090 PF00356 Bacterial regulatory proteins, lacI family CAB88_05095 PF14149 YhfH-like protein CAB88_05100 PF12706 Beta-lactamase superfamily domain CAB88_05105 PF10437 Bacterial lipoate protein ligase C-terminus CAB88_05105 PF03099 Biotin/lipoate A/B protein ligase family CAB88_05115 PF13193 AMP-binding enzyme C-terminal domain CAB88_05115 PF00501 AMP-binding enzyme CAB88_05120 PF00395 S-layer homology domain CAB88_05120 PF01520 N-acetylmuramoyl-L-alanine amidase CAB88_05130 PF00528 Binding-protein-dependent transport system inner membrane component CAB88_05135 PF00528 Binding-protein-dependent transport system inner membrane component CAB88_05140 PF12857 TOBE-like domain CAB88_05140 PF17850 CysA C-terminal regulatory domain CAB88_05140 PF00005 ABC transporter CAB88_05145 PF07968 Leukocidin/Hemolysin toxin family CAB88_05155 PF00149 Calcineurin-like phosphoesterase CAB88_05160 PF01966 HD domain CAB88_05170 PF08281 Sigma-70, region 4 CAB88_05170 PF04542 Sigma-70 region 2 CAB88_05175 PF12833 Helix-turn-helix domain CAB88_05175 PF06445 GyrI-like small molecule binding domain CAB88_05180 PF01548 Transposase CAB88_05180 PF02371 Transposase IS116/IS110/IS902 family CAB88_05190 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CAB88_05190 PF00512 His Kinase A (phospho-acceptor) domain CAB88_05195 PF00486 Transcriptional regulatory protein, C terminal CAB88_05195 PF00072 Response regulator receiver domain CAB88_05215 PF01435 Peptidase family M48 CAB88_05215 PF16491 CAAX prenyl protease N-terminal, five membrane helices CAB88_05220 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CAB88_05220 PF00672 HAMP domain CAB88_05220 PF02743 Cache domain CAB88_05230 PF00395 S-layer homology domain CAB88_05230 PF00331 Glycosyl hydrolase family 10 CAB88_05230 PF02018 Carbohydrate binding domain CAB88_05230 PF06452 Carbohydrate family 9 binding domain-like CAB88_05240 PF01274 Malate synthase CAB88_05245 PF00463 Isocitrate lyase family CAB88_05260 PF00313 'Cold-shock' DNA-binding domain CAB88_05280 PF09335 SNARE associated Golgi protein CAB88_05285 PF10502 Signal peptidase, peptidase S26 CAB88_05290 PF12705 PD-(D/E)XK nuclease superfamily CAB88_05290 PF13361 UvrD-like helicase C-terminal domain CAB88_05295 PF13361 UvrD-like helicase C-terminal domain CAB88_05295 PF12705 PD-(D/E)XK nuclease superfamily CAB88_05295 PF00580 UvrD/REP helicase N-terminal domain CAB88_05300 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain CAB88_05300 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain CAB88_05300 PF01000 RNA polymerase Rpb3/RpoA insert domain CAB88_05305 PF10676 Spore germination protein gerPA/gerPF CAB88_05310 PF10970 Spore germination protein GerPE CAB88_05320 PF10737 Spore germination protein GerPC CAB88_05325 PF10803 Spore germination GerPB CAB88_05330 PF10676 Spore germination protein gerPA/gerPF CAB88_05335 PF09388 Spo0E like sporulation regulatory protein CAB88_05340 PF01557 Fumarylacetoacetate (FAA) hydrolase family CAB88_05350 PF00202 Aminotransferase class-III CAB88_05365 PF13537 Glutamine amidotransferase domain CAB88_05365 PF00733 Asparagine synthase CAB88_05375 PF06628 Catalase-related immune-responsive CAB88_05375 PF00199 Catalase CAB88_05380 PF00909 Ammonium Transporter Family CAB88_05390 PF00128 Alpha amylase, catalytic domain CAB88_05405 PF04461 Protein of unknown function (DUF520) CAB88_05410 PF13509 S1 domain CAB88_05410 PF17783 CvfB-like winged helix domain CAB88_05425 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) CAB88_05425 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 CAB88_05430 PF12758 Protein of unknown function (DUF3813) CAB88_05450 PF14168 YjzC-like protein CAB88_05455 PF17871 AAA lid domain CAB88_05455 PF10431 C-terminal, D2-small domain, of ClpB protein CAB88_05455 PF00004 ATPase family associated with various cellular activities (AAA) CAB88_05455 PF07724 AAA domain (Cdc48 subfamily) CAB88_05455 PF02861 Clp amino terminal domain, pathogenicity island component CAB88_05475 PF10815 ComZ CAB88_05480 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal CAB88_05480 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III CAB88_05485 PF02801 Beta-ketoacyl synthase, C-terminal domain CAB88_05485 PF00109 Beta-ketoacyl synthase, N-terminal domain CAB88_05490 PF10026 Predicted Zn-dependent protease (DUF2268) CAB88_05495 PF12227 Protein of unknown function (DUF3603) CAB88_05500 PF00579 tRNA synthetases class I (W and Y) CAB88_05515 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CAB88_05520 PF00528 Binding-protein-dependent transport system inner membrane component CAB88_05525 PF12911 N-terminal TM domain of oligopeptide transport permease C CAB88_05525 PF00528 Binding-protein-dependent transport system inner membrane component CAB88_05530 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CAB88_05530 PF00005 ABC transporter CAB88_05535 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CAB88_05535 PF00005 ABC transporter CAB88_05540 PF01554 MatE CAB88_05545 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CAB88_05565 PF03960 ArsC family CAB88_05570 PF03741 Integral membrane protein TerC family CAB88_05575 PF05389 Negative regulator of genetic competence (MecA) CAB88_05580 PF13091 PLD-like domain CAB88_05580 PF13396 Phospholipase_D-nuclease N-terminal CAB88_05600 PF01432 Peptidase family M3 CAB88_05600 PF08439 Oligopeptidase F CAB88_05615 PF01152 Bacterial-like globin CAB88_05620 PF01928 CYTH domain CAB88_05630 PF04607 Region found in RelA / SpoT proteins CAB88_05635 PF01513 ATP-NAD kinase CAB88_05640 PF00849 RNA pseudouridylate synthase CAB88_05650 PF00149 Calcineurin-like phosphoesterase CAB88_05655 PF01098 Cell cycle protein CAB88_05660 PF00535 Glycosyl transferase family 2 CAB88_05665 PF08241 Methyltransferase domain CAB88_05670 PF05711 Macrocin-O-methyltransferase (TylF) CAB88_05680 PF13181 Tetratricopeptide repeat CAB88_05680 PF00535 Glycosyl transferase family 2 CAB88_05700 PF00483 Nucleotidyl transferase CAB88_05705 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase CAB88_05710 PF16363 GDP-mannose 4,6 dehydratase CAB88_05715 PF04321 RmlD substrate binding domain CAB88_05735 PF07098 Protein of unknown function (DUF1360) CAB88_05755 PF13361 UvrD-like helicase C-terminal domain CAB88_05755 PF00580 UvrD/REP helicase N-terminal domain CAB88_05760 PF13673 Acetyltransferase (GNAT) domain CAB88_05770 PF00756 Putative esterase CAB88_05785 PF02368 Bacterial Ig-like domain (group 2) CAB88_05790 PF00474 Sodium:solute symporter family CAB88_05805 PF00117 Glutamine amidotransferase class-I CAB88_05805 PF02885 Glycosyl transferase family, helical bundle domain CAB88_05805 PF00591 Glycosyl transferase family, a/b domain CAB88_05810 PF02885 Glycosyl transferase family, helical bundle domain CAB88_05810 PF00591 Glycosyl transferase family, a/b domain CAB88_05815 PF00218 Indole-3-glycerol phosphate synthase CAB88_05820 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase CAB88_05825 PF00291 Pyridoxal-phosphate dependent enzyme CAB88_05830 PF00290 Tryptophan synthase alpha chain CAB88_05840 PF02652 L-lactate permease CAB88_05845 PF10042 Uncharacterized conserved protein (DUF2278) CAB88_05860 PF13240 zinc-ribbon domain CAB88_05875 PF07992 Pyridine nucleotide-disulphide oxidoreductase CAB88_05875 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CAB88_05890 PF01209 ubiE/COQ5 methyltransferase family CAB88_05895 PF00881 Nitroreductase family CAB88_05910 PF02817 e3 binding domain CAB88_05910 PF00364 Biotin-requiring enzyme CAB88_05910 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) CAB88_05915 PF16870 2-oxoglutarate dehydrogenase C-terminal CAB88_05915 PF00676 Dehydrogenase E1 component CAB88_05915 PF02779 Transketolase, pyrimidine binding domain CAB88_05920 PF01381 Helix-turn-helix CAB88_05995 PF07943 Penicillin-binding protein 5, C-terminal domain CAB88_05995 PF00768 D-alanyl-D-alanine carboxypeptidase CAB88_06005 PF12389 Camelysin metallo-endopeptidase CAB88_06015 PF12389 Camelysin metallo-endopeptidase CAB88_06020 PF01381 Helix-turn-helix CAB88_06020 PF08671 Anti-repressor SinI CAB88_06030 PF05547 Immune inhibitor A peptidase M6 CAB88_06035 PF00171 Aldehyde dehydrogenase family CAB88_06040 PF08402 TOBE domain CAB88_06040 PF00005 ABC transporter CAB88_06045 PF00528 Binding-protein-dependent transport system inner membrane component CAB88_06050 PF00528 Binding-protein-dependent transport system inner membrane component CAB88_06055 PF13416 Bacterial extracellular solute-binding protein CAB88_06065 PF03176 MMPL family CAB88_06075 PF00849 RNA pseudouridylate synthase CAB88_06075 PF01479 S4 domain CAB88_06085 PF00188 Cysteine-rich secretory protein family CAB88_06090 PF02754 Cysteine-rich domain CAB88_06090 PF13183 4Fe-4S dicluster domain CAB88_06095 PF02913 FAD linked oxidases, C-terminal domain CAB88_06095 PF01565 FAD binding domain CAB88_06100 PF17853 GGDEF-like domain CAB88_06100 PF05651 Putative sugar diacid recognition CAB88_06100 PF13556 PucR C-terminal helix-turn-helix domain CAB88_06110 PF00486 Transcriptional regulatory protein, C terminal CAB88_06110 PF00072 Response regulator receiver domain CAB88_06115 PF00512 His Kinase A (phospho-acceptor) domain CAB88_06115 PF00672 HAMP domain CAB88_06115 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CAB88_06115 PF18698 Histidine kinase sensor domain CAB88_06115 PF00989 PAS fold CAB88_06120 PF00392 Bacterial regulatory proteins, gntR family CAB88_06120 PF07729 FCD domain CAB88_06125 PF02754 Cysteine-rich domain CAB88_06130 PF13183 4Fe-4S dicluster domain CAB88_06130 PF02589 LUD domain CAB88_06130 PF11870 Domain of unknown function (DUF3390) CAB88_06135 PF02589 LUD domain CAB88_06140 PF06750 Bacterial Peptidase A24 N-terminal domain CAB88_06140 PF01478 Type IV leader peptidase family CAB88_06150 PF01226 Formate/nitrite transporter CAB88_06155 PF03741 Integral membrane protein TerC family CAB88_06160 PF02386 Cation transport protein CAB88_06165 PF00269 Small, acid-soluble spore proteins, alpha/beta type CAB88_06170 PF01575 MaoC like domain CAB88_06195 PF00561 alpha/beta hydrolase fold CAB88_06205 PF02386 Cation transport protein CAB88_06230 PF00005 ABC transporter CAB88_06230 PF08402 TOBE domain CAB88_06235 PF00528 Binding-protein-dependent transport system inner membrane component CAB88_06240 PF13419 Haloacid dehalogenase-like hydrolase CAB88_06245 PF00266 Aminotransferase class-V CAB88_06255 PF00455 DeoR C terminal sensor domain CAB88_06255 PF08220 DeoR-like helix-turn-helix domain CAB88_06270 PF00596 Class II Aldolase and Adducin N-terminal domain CAB88_06280 PF04748 Divergent polysaccharide deacetylase CAB88_06285 PF09388 Spo0E like sporulation regulatory protein CAB88_06290 PF00512 His Kinase A (phospho-acceptor) domain CAB88_06290 PF02743 Cache domain CAB88_06290 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CAB88_06295 PF01047 MarR family CAB88_06305 PF12867 DinB superfamily CAB88_06315 PF00512 His Kinase A (phospho-acceptor) domain CAB88_06315 PF00989 PAS fold CAB88_06315 PF13426 PAS domain CAB88_06315 PF13188 PAS domain CAB88_06315 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CAB88_06320 PF06508 Queuosine biosynthesis protein QueC CAB88_06325 PF01242 6-pyruvoyl tetrahydropterin synthase CAB88_06330 PF04055 Radical SAM superfamily CAB88_06335 PF14489 QueF-like protein CAB88_06340 PF09953 Uncharacterized protein conserved in bacteria (DUF2187) CAB88_06380 PF07972 NrdI Flavodoxin like CAB88_06385 PF02867 Ribonucleotide reductase, barrel domain CAB88_06385 PF08343 Ribonucleotide reductase N-terminal CAB88_06385 PF00317 Ribonucleotide reductase, all-alpha domain CAB88_06390 PF00268 Ribonucleotide reductase, small chain CAB88_06395 PF00392 Bacterial regulatory proteins, gntR family CAB88_06400 PF00005 ABC transporter CAB88_06410 PF00005 ABC transporter CAB88_06430 PF01037 Lrp/AsnC ligand binding domain CAB88_06440 PF00857 Isochorismatase family CAB88_06450 PF17676 LD-carboxypeptidase C-terminal domain CAB88_06450 PF02016 LD-carboxypeptidase N-terminal domain CAB88_06455 PF03060 Nitronate monooxygenase CAB88_06460 PF04914 DltD protein CAB88_06465 PF00550 Phosphopantetheine attachment site CAB88_06470 PF03062 MBOAT, membrane-bound O-acyltransferase family CAB88_06475 PF00501 AMP-binding enzyme CAB88_06475 PF13193 AMP-binding enzyme C-terminal domain CAB88_06485 PF01546 Peptidase family M20/M25/M40 CAB88_06485 PF07687 Peptidase dimerisation domain CAB88_06495 PF00258 Flavodoxin CAB88_06510 PF01636 Phosphotransferase enzyme family CAB88_06535 PF01554 MatE CAB88_06540 PF02673 Bacitracin resistance protein BacA CAB88_06555 PF01047 MarR family CAB88_06565 PF00375 Sodium:dicarboxylate symporter family CAB88_06570 PF02386 Cation transport protein CAB88_06580 PF09579 Sporulation protein YtfJ (Spore_YtfJ) CAB88_06595 PF03698 Uncharacterised protein family (UPF0180) CAB88_06610 PF01063 Amino-transferase class IV CAB88_06615 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CAB88_06615 PF00205 Thiamine pyrophosphate enzyme, central domain CAB88_06615 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CAB88_06620 PF01842 ACT domain CAB88_06620 PF10369 Small subunit of acetolactate synthase CAB88_06625 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain CAB88_06625 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain CAB88_06630 PF00682 HMGL-like CAB88_06630 PF08502 LeuA allosteric (dimerisation) domain CAB88_06635 PF00180 Isocitrate/isopropylmalate dehydrogenase CAB88_06640 PF00330 Aconitase family (aconitate hydratase) CAB88_06645 PF00694 Aconitase C-terminal domain CAB88_06650 PF13393 Histidyl-tRNA synthetase CAB88_06655 PF01634 ATP phosphoribosyltransferase CAB88_06660 PF00815 Histidinol dehydrogenase CAB88_06665 PF00475 Imidazoleglycerol-phosphate dehydratase CAB88_06670 PF00117 Glutamine amidotransferase class-I CAB88_06675 PF00977 Histidine biosynthesis protein CAB88_06680 PF00977 Histidine biosynthesis protein CAB88_06685 PF01502 Phosphoribosyl-AMP cyclohydrolase CAB88_06690 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase CAB88_06695 PF02811 PHP domain CAB88_06705 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CAB88_06705 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CAB88_06710 PF01066 CDP-alcohol phosphatidyltransferase CAB88_06715 PF00884 Sulfatase CAB88_06725 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain CAB88_06725 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain CAB88_06735 PF01507 Phosphoadenosine phosphosulfate reductase family CAB88_06740 PF01747 ATP-sulfurylase CAB88_06740 PF14306 PUA-like domain CAB88_06750 PF01077 Nitrite and sulphite reductase 4Fe-4S domain CAB88_06750 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain CAB88_06760 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CAB88_06765 PF01903 CbiX CAB88_06780 PF00209 Sodium:neurotransmitter symporter family CAB88_06790 PF00375 Sodium:dicarboxylate symporter family CAB88_06800 PF03553 Na+/H+ antiporter family CAB88_06815 PF09922 Cell wall-active antibiotics response 4TMS YvqF CAB88_06820 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CAB88_06820 PF00672 HAMP domain CAB88_06820 PF07730 Histidine kinase CAB88_06825 PF00196 Bacterial regulatory proteins, luxR family CAB88_06825 PF00072 Response regulator receiver domain CAB88_06835 PF05525 Branched-chain amino acid transport protein CAB88_06845 PF01209 ubiE/COQ5 methyltransferase family CAB88_06870 PF00970 Oxidoreductase FAD-binding domain CAB88_06870 PF00042 Globin CAB88_06870 PF00175 Oxidoreductase NAD-binding domain CAB88_06890 PF01925 Sulfite exporter TauE/SafE CAB88_06895 PF01384 Phosphate transporter family CAB88_06900 PF01865 Protein of unknown function DUF47 CAB88_06905 PF00912 Transglycosylase CAB88_06905 PF00905 Penicillin binding protein transpeptidase domain CAB88_06920 PF00512 His Kinase A (phospho-acceptor) domain CAB88_06920 PF00989 PAS fold CAB88_06920 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CAB88_06925 PF01904 Protein of unknown function DUF72 CAB88_06935 PF00589 Phage integrase family CAB88_06940 PF00512 His Kinase A (phospho-acceptor) domain CAB88_06940 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CAB88_06940 PF16736 Single Cache-like CAB88_06940 PF00989 PAS fold CAB88_06950 PF01048 Phosphorylase superfamily CAB88_06960 PF09924 Uncharacterised conserved protein (DUF2156) CAB88_06960 PF03706 Lysylphosphatidylglycerol synthase TM region CAB88_06975 PF02777 Iron/manganese superoxide dismutases, C-terminal domain CAB88_06975 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain CAB88_06980 PF00768 D-alanyl-D-alanine carboxypeptidase CAB88_06980 PF07943 Penicillin-binding protein 5, C-terminal domain CAB88_06985 PF07670 Nucleoside recognition CAB88_06990 PF07670 Nucleoside recognition CAB88_06995 PF00849 RNA pseudouridylate synthase CAB88_06995 PF01479 S4 domain CAB88_07000 PF00578 AhpC/TSA family CAB88_07005 PF05140 ResB-like family CAB88_07010 PF01578 Cytochrome C assembly protein CAB88_07015 PF00486 Transcriptional regulatory protein, C terminal CAB88_07015 PF00072 Response regulator receiver domain CAB88_07020 PF00512 His Kinase A (phospho-acceptor) domain CAB88_07020 PF18698 Histidine kinase sensor domain CAB88_07020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CAB88_07020 PF00989 PAS fold CAB88_07020 PF00672 HAMP domain CAB88_07025 PF01923 Cobalamin adenosyltransferase CAB88_07040 PF12822 ECF transporter, substrate-specific component CAB88_07055 PF00271 Helicase conserved C-terminal domain CAB88_07055 PF00270 DEAD/DEAH box helicase CAB88_07060 PF02517 CPBP intramembrane metalloprotease CAB88_07070 PF00149 Calcineurin-like phosphoesterase CAB88_07075 PF13411 MerR HTH family regulatory protein CAB88_07080 PF05389 Negative regulator of genetic competence (MecA) CAB88_07085 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain CAB88_07085 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase CAB88_07110 PF17763 Glutaminase/Asparaginase C-terminal domain CAB88_07110 PF00710 Asparaginase, N-terminal CAB88_07120 PF02224 Cytidylate kinase CAB88_07125 PF00575 S1 RNA binding domain CAB88_07130 PF01070 FMN-dependent dehydrogenase CAB88_07135 PF14140 YpzI-like protein CAB88_07145 PF14045 YIEGIA protein CAB88_07155 PF01926 50S ribosome-binding GTPase CAB88_07155 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal CAB88_07160 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus CAB88_07160 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus CAB88_07170 PF10966 Protein of unknown function (DUF2768) CAB88_07180 PF09547 Stage IV sporulation protein A (spore_IV_A) CAB88_07185 PF00216 Bacterial DNA-binding protein CAB88_07190 PF01227 GTP cyclohydrolase I CAB88_07195 PF07307 Heptaprenyl diphosphate synthase (HEPPP synthase) subunit 1 CAB88_07200 PF01209 ubiE/COQ5 methyltransferase family CAB88_07205 PF00348 Polyprenyl synthetase CAB88_07210 PF00334 Nucleoside diphosphate kinase CAB88_07215 PF01264 Chorismate synthase CAB88_07220 PF01761 3-dehydroquinate synthase CAB88_07225 PF00155 Aminotransferase class I and II CAB88_07235 PF08858 IDEAL domain CAB88_07235 PF08864 UPF0302 domain CAB88_07240 PF10673 Protein of unknown function (DUF2487) CAB88_07245 PF00355 Rieske [2Fe-2S] domain CAB88_07250 PF00033 Cytochrome b/b6/petB CAB88_07255 PF13442 Cytochrome C oxidase, cbb3-type, subunit III CAB88_07255 PF00032 Cytochrome b(C-terminal)/b6/petD CAB88_07260 PF07187 Protein of unknown function (DUF1405) CAB88_07270 PF09577 Sporulation protein YpjB (SpoYpjB) CAB88_07275 PF04298 Putative neutral zinc metallopeptidase CAB88_07285 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 CAB88_07285 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) CAB88_07290 PF03819 MazG nucleotide pyrophosphohydrolase domain CAB88_07295 PF05173 Dihydrodipicolinate reductase, C-terminus CAB88_07295 PF01113 Dihydrodipicolinate reductase, N-terminus CAB88_07300 PF02142 MGS-like domain CAB88_07305 PF02585 GlcNAc-PI de-N-acetylase CAB88_07310 PF00534 Glycosyl transferases group 1 CAB88_07310 PF13439 Glycosyltransferase Family 4 CAB88_07315 PF01743 Poly A polymerase head domain CAB88_07315 PF13735 tRNA nucleotidyltransferase domain 2 putative CAB88_07315 PF12627 Probable RNA and SrmB- binding site of polymerase A CAB88_07320 PF08279 HTH domain CAB88_07320 PF03099 Biotin/lipoate A/B protein ligase family CAB88_07320 PF02237 Biotin protein ligase C terminal domain CAB88_07335 PF02548 Ketopantoate hydroxymethyltransferase CAB88_07340 PF02569 Pantoate-beta-alanine ligase CAB88_07345 PF02261 Aspartate decarboxylase CAB88_07350 PF13307 Helicase C-terminal domain CAB88_07350 PF04851 Type III restriction enzyme, res subunit CAB88_07350 PF00929 Exonuclease CAB88_07355 PF14084 Protein of unknown function (DUF4264) CAB88_07365 PF00155 Aminotransferase class I and II CAB88_07370 PF07261 Replication initiation and membrane attachment CAB88_07375 PF10576 Iron-sulfur binding domain of endonuclease III CAB88_07375 PF00633 Helix-hairpin-helix motif CAB88_07375 PF00730 HhH-GPD superfamily base excision DNA repair protein CAB88_07385 PF00905 Penicillin binding protein transpeptidase domain CAB88_07385 PF00912 Transglycosylase CAB88_07390 PF03838 Recombination protein U CAB88_07395 PF10720 Protein of unknown function (DUF2515) CAB88_07430 PF06908 YspA SLOG family CAB88_07435 PF05103 DivIVA protein CAB88_07445 PF01170 Putative RNA methylase family UPF0020 CAB88_07445 PF02926 THUMP domain CAB88_07455 PF13307 Helicase C-terminal domain CAB88_07460 PF02074 Carboxypeptidase Taq (M32) metallopeptidase CAB88_07470 PF00557 Metallopeptidase family M24 CAB88_07475 PF00156 Phosphoribosyl transferase domain CAB88_07480 PF00860 Permease family CAB88_07485 PF04235 Protein of unknown function (DUF418) CAB88_07495 PF00350 Dynamin family CAB88_07505 PF00583 Acetyltransferase (GNAT) family CAB88_07510 PF10752 Protein of unknown function (DUF2533) CAB88_07515 PF00581 Rhodanese-like domain CAB88_07550 PF00690 Cation transporter/ATPase, N-terminus CAB88_07550 PF00689 Cation transporting ATPase, C-terminus CAB88_07555 PF01367 5'-3' exonuclease, C-terminal SAM fold CAB88_07555 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain CAB88_07570 PF02706 Chain length determinant protein CAB88_07570 PF13807 G-rich domain on putative tyrosine kinase CAB88_07580 PF02397 Bacterial sugar transferase CAB88_07595 PF00535 Glycosyl transferase family 2 CAB88_07600 PF13439 Glycosyltransferase Family 4 CAB88_07600 PF00534 Glycosyl transferases group 1 CAB88_07615 PF18014 Acetyltransferase (GNAT) domain CAB88_07615 PF13673 Acetyltransferase (GNAT) domain CAB88_07635 PF13456 Reverse transcriptase-like CAB88_07640 PF01263 Aldose 1-epimerase CAB88_07665 PF00313 'Cold-shock' DNA-binding domain CAB88_07670 PF08892 YqcI/YcgG family CAB88_07675 PF01810 LysE type translocator CAB88_07695 PF00474 Sodium:solute symporter family CAB88_07700 PF00202 Aminotransferase class-III CAB88_07710 PF00999 Sodium/hydrogen exchanger family CAB88_07715 PF13411 MerR HTH family regulatory protein CAB88_07715 PF06445 GyrI-like small molecule binding domain CAB88_07725 PF04239 Protein of unknown function (DUF421) CAB88_07730 PF02698 DUF218 domain CAB88_07740 PF00881 Nitroreductase family CAB88_07790 PF17209 Hfq protein CAB88_07800 PF01618 MotA/TolQ/ExbB proton channel family CAB88_07805 PF13677 Membrane MotB of proton-channel complex MotA/MotB CAB88_07805 PF00691 OmpA family CAB88_07810 PF00072 Response regulator receiver domain CAB88_07815 PF01584 CheW-like domain CAB88_07815 PF02895 Signal transducing histidine kinase, homodimeric domain CAB88_07815 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CAB88_07815 PF01627 Hpt domain CAB88_07815 PF07194 P2 response regulator binding domain CAB88_07820 PF04509 CheC-like family CAB88_07820 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term CAB88_07835 PF01739 CheR methyltransferase, SAM binding domain CAB88_07835 PF03705 CheR methyltransferase, all-alpha domain CAB88_07855 PF00460 Flagella basal body rod protein CAB88_07855 PF06429 Flagellar basal body rod FlgEFG protein C-terminal CAB88_07860 PF00700 Bacterial flagellin C-terminal helical region CAB88_07860 PF00669 Bacterial flagellin N-terminal helical region CAB88_07880 PF00460 Flagella basal body rod protein CAB88_07885 PF06429 Flagellar basal body rod FlgEFG protein C-terminal CAB88_07885 PF00460 Flagella basal body rod protein CAB88_07890 PF02049 Flagellar hook-basal body complex protein FliE CAB88_07895 PF01514 Secretory protein of YscJ/FliF family CAB88_07895 PF08345 Flagellar M-ring protein C-terminal CAB88_07900 PF01706 FliG C-terminal domain CAB88_07900 PF14841 FliG middle domain CAB88_07900 PF14842 FliG N-terminal domain CAB88_07910 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CAB88_07910 PF02874 ATP synthase alpha/beta family, beta-barrel domain CAB88_07910 PF18269 T3SS EscN ATPase C-terminal domain CAB88_07930 PF00460 Flagella basal body rod protein CAB88_07930 PF06429 Flagellar basal body rod FlgEFG protein C-terminal CAB88_07930 PF07559 Flagellar basal body protein FlaE CAB88_07945 PF01584 CheW-like domain CAB88_07945 PF00072 Response regulator receiver domain CAB88_07950 PF12181 DNA binding domain of the motility gene repressor (MogR) CAB88_07955 PF00700 Bacterial flagellin C-terminal helical region CAB88_07955 PF00669 Bacterial flagellin N-terminal helical region CAB88_07960 PF00700 Bacterial flagellin C-terminal helical region CAB88_07960 PF00669 Bacterial flagellin N-terminal helical region CAB88_07965 PF01464 Transglycosylase SLT domain CAB88_07975 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term CAB88_07975 PF02154 Flagellar motor switch protein FliM CAB88_07980 PF04509 CheC-like family CAB88_07980 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term CAB88_07990 PF00813 FliP family CAB88_07995 PF01313 Bacterial export proteins, family 3 CAB88_08005 PF01312 FlhB HrpN YscU SpaS Family CAB88_08010 PF00771 FHIPEP family CAB88_08015 PF00448 SRP54-type protein, GTPase domain CAB88_08020 PF06429 Flagellar basal body rod FlgEFG protein C-terminal CAB88_08020 PF00460 Flagella basal body rod protein CAB88_08030 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain CAB88_08030 PF01411 tRNA synthetases class II (A) CAB88_08030 PF02272 DHHA1 domain CAB88_08065 PF03992 Antibiotic biosynthesis monooxygenase CAB88_08070 PF00535 Glycosyl transferase family 2 CAB88_08070 PF07238 PilZ domain CAB88_08075 PF08141 Small acid-soluble spore protein H family CAB88_08100 PF08402 TOBE domain CAB88_08100 PF00005 ABC transporter CAB88_08110 PF00528 Binding-protein-dependent transport system inner membrane component CAB88_08125 PF00144 Beta-lactamase CAB88_08130 PF10787 Uncharacterised protein from bacillus cereus group CAB88_08150 PF13021 Domain of unknown function (DUF3885) CAB88_08155 PF00300 Histidine phosphatase superfamily (branch 1) CAB88_08165 PF00561 alpha/beta hydrolase fold CAB88_08175 PF01047 MarR family CAB88_08185 PF00733 Asparagine synthase CAB88_08185 PF13537 Glutamine amidotransferase domain CAB88_08205 PF01545 Cation efflux family CAB88_08205 PF16916 Dimerisation domain of Zinc Transporter CAB88_08215 PF00392 Bacterial regulatory proteins, gntR family CAB88_08215 PF07729 FCD domain CAB88_08220 PF00892 EamA-like transporter family CAB88_08230 PF07683 Cobalamin synthesis protein cobW C-terminal domain CAB88_08230 PF02492 CobW/HypB/UreG, nucleotide-binding domain CAB88_08240 PF03773 Predicted permease CAB88_08255 PF03553 Na+/H+ antiporter family CAB88_08260 PF13411 MerR HTH family regulatory protein CAB88_08270 PF10415 Fumarase C C-terminus CAB88_08270 PF00206 Lyase CAB88_08285 PF01554 MatE CAB88_08290 PF03575 Peptidase family S51 CAB88_08310 PF02683 Cytochrome C biogenesis protein transmembrane region CAB88_08315 PF00578 AhpC/TSA family CAB88_08325 PF18801 response regulator aspartate phosphatase H, N terminal CAB88_08340 PF00291 Pyridoxal-phosphate dependent enzyme CAB88_08345 PF04286 Protein of unknown function (DUF445) CAB88_08375 PF00072 Response regulator receiver domain CAB88_08375 PF00196 Bacterial regulatory proteins, luxR family CAB88_08380 PF13185 GAF domain CAB88_08380 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CAB88_08380 PF13492 GAF domain CAB88_08380 PF07730 Histidine kinase CAB88_08385 PF00005 ABC transporter CAB88_08400 PF13091 PLD-like domain CAB88_08405 PF00696 Amino acid kinase family CAB88_08410 PF00375 Sodium:dicarboxylate symporter family CAB88_08415 PF00206 Lyase CAB88_08415 PF10415 Fumarase C C-terminus CAB88_08420 PF03949 Malic enzyme, NAD binding domain CAB88_08420 PF00390 Malic enzyme, N-terminal domain CAB88_08425 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CAB88_08430 PF00072 Response regulator receiver domain CAB88_08430 PF08664 YcbB domain CAB88_08435 PF00176 SNF2 family N-terminal domain CAB88_08435 PF04434 SWIM zinc finger CAB88_08435 PF00271 Helicase conserved C-terminal domain CAB88_08450 PF03590 Aspartate-ammonia ligase CAB88_08465 PF13840 ACT domain CAB88_08465 PF00696 Amino acid kinase family CAB88_08480 PF13761 Domain of unknown function (DUF4166) CAB88_08485 PF14158 YndJ-like protein CAB88_08500 PF03976 Polyphosphate kinase 2 (PPK2) CAB88_08505 PF10400 Virulence activator alpha C-term CAB88_08505 PF03551 Transcriptional regulator PadR-like family CAB88_08510 PF07690 Major Facilitator Superfamily CAB88_08515 PF07690 Major Facilitator Superfamily CAB88_08520 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal CAB88_08520 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III CAB88_08530 PF01926 50S ribosome-binding GTPase CAB88_08530 PF13167 GTP-binding GTPase N-terminal CAB88_08530 PF16360 GTP-binding GTPase Middle Region CAB88_08535 PF07690 Major Facilitator Superfamily CAB88_08540 PF00291 Pyridoxal-phosphate dependent enzyme CAB88_08560 PF00209 Sodium:neurotransmitter symporter family CAB88_08565 PF03422 Carbohydrate binding module (family 6) CAB88_08565 PF00457 Glycosyl hydrolases family 11 CAB88_08565 PF01522 Polysaccharide deacetylase CAB88_08575 PF04239 Protein of unknown function (DUF421) CAB88_08605 PF01625 Peptide methionine sulfoxide reductase CAB88_08615 PF01063 Amino-transferase class IV CAB88_08620 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CAB88_08620 PF00205 Thiamine pyrophosphate enzyme, central domain CAB88_08620 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CAB88_08630 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain CAB88_08630 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain CAB88_08635 PF00920 Dehydratase family CAB88_08640 PF00291 Pyridoxal-phosphate dependent enzyme CAB88_08640 PF00585 C-terminal regulatory domain of Threonine dehydratase CAB88_08650 PF09587 Bacterial capsule synthesis protein PGA_cap CAB88_08665 PF07690 Major Facilitator Superfamily CAB88_08670 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase CAB88_08680 PF00072 Response regulator receiver domain CAB88_08680 PF04397 LytTr DNA-binding domain CAB88_08685 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain CAB88_08685 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain CAB88_08700 PF01979 Amidohydrolase family CAB88_08705 PF07690 Major Facilitator Superfamily CAB88_08710 PF00440 Bacterial regulatory proteins, tetR family CAB88_08715 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CAB88_08720 PF13302 Acetyltransferase (GNAT) domain CAB88_08725 PF00486 Transcriptional regulatory protein, C terminal CAB88_08725 PF00072 Response regulator receiver domain CAB88_08730 PF00512 His Kinase A (phospho-acceptor) domain CAB88_08730 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CAB88_08745 PF01566 Natural resistance-associated macrophage protein CAB88_08760 PF08546 Ketopantoate reductase PanE/ApbA C terminal CAB88_08760 PF02558 Ketopantoate reductase PanE/ApbA CAB88_08765 PF13520 Amino acid permease CAB88_08780 PF05791 Bacillus haemolytic enterotoxin (HBL) CAB88_08785 PF05791 Bacillus haemolytic enterotoxin (HBL) CAB88_08790 PF00754 F5/8 type C domain CAB88_08790 PF13088 BNR repeat-like domain CAB88_08790 PF10633 NPCBM-associated, NEW3 domain of alpha-galactosidase CAB88_08795 PF02073 Thermophilic metalloprotease (M29) CAB88_08810 PF00583 Acetyltransferase (GNAT) family CAB88_08820 PF01906 Putative heavy-metal-binding CAB88_08825 PF02517 CPBP intramembrane metalloprotease CAB88_08830 PF00440 Bacterial regulatory proteins, tetR family CAB88_08835 PF04198 Putative sugar-binding domain CAB88_08840 PF01791 DeoC/LacD family aldolase CAB88_08845 PF07662 Na+ dependent nucleoside transporter C-terminus CAB88_08845 PF01773 Na+ dependent nucleoside transporter N-terminus CAB88_08850 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain CAB88_08850 PF00591 Glycosyl transferase family, a/b domain CAB88_08850 PF02885 Glycosyl transferase family, helical bundle domain CAB88_08855 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region CAB88_08860 PF07301 Protein of unknown function (DUF1453) CAB88_08865 PF05979 Bacterial protein of unknown function (DUF896) CAB88_08880 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CAB88_08880 PF03466 LysR substrate binding domain CAB88_08895 PF05195 Aminopeptidase P, N-terminal domain CAB88_08895 PF00557 Metallopeptidase family M24 CAB88_08905 PF00394 Multicopper oxidase CAB88_08905 PF07731 Multicopper oxidase CAB88_08905 PF07732 Multicopper oxidase CAB88_08935 PF02525 Flavodoxin-like fold CAB88_08940 PF05525 Branched-chain amino acid transport protein CAB88_08950 PF13115 YtkA-like CAB88_08950 PF05425 Copper resistance protein D CAB88_08950 PF04234 CopC domain CAB88_08955 PF07987 Domain of unkown function (DUF1775) CAB88_08960 PF00892 EamA-like transporter family CAB88_08965 PF03466 LysR substrate binding domain CAB88_08965 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CAB88_08970 PF02082 Transcriptional regulator CAB88_08975 PF01323 DSBA-like thioredoxin domain CAB88_08980 PF00881 Nitroreductase family CAB88_08995 PF01381 Helix-turn-helix CAB88_09025 PF01548 Transposase CAB88_09025 PF02371 Transposase IS116/IS110/IS902 family CAB88_09100 PF01367 5'-3' exonuclease, C-terminal SAM fold CAB88_09100 PF00476 DNA polymerase family A CAB88_09100 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain CAB88_09100 PF01612 3'-5' exonuclease CAB88_09145 PF01555 DNA methylase CAB88_09190 PF18277 AbrB C-terminal domain CAB88_09190 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin CAB88_09225 PF18010 Cry35Ab1 HTH C-terminal domain CAB88_09225 PF00239 Resolvase, N terminal domain CAB88_09335 PF05105 Bacteriophage holin family CAB88_09340 PF01510 N-acetylmuramoyl-L-alanine amidase CAB88_09340 PF12123 N-acetylmuramoyl-l-alanine amidase CAB88_09410 PF01609 Transposase DDE domain CAB88_09425 PF01594 AI-2E family transporter CAB88_09430 PF00056 lactate/malate dehydrogenase, NAD binding domain CAB88_09430 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain CAB88_09435 PF01593 Flavin containing amine oxidoreductase CAB88_09445 PF02492 CobW/HypB/UreG, nucleotide-binding domain CAB88_09445 PF07683 Cobalamin synthesis protein cobW C-terminal domain CAB88_09455 PF12399 Branched-chain amino acid ATP-binding cassette transporter CAB88_09455 PF00005 ABC transporter CAB88_09460 PF00005 ABC transporter CAB88_09465 PF02653 Branched-chain amino acid transport system / permease component CAB88_09475 PF03466 LysR substrate binding domain CAB88_09475 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CAB88_09485 PF14552 Tautomerase enzyme CAB88_09495 PF01047 MarR family CAB88_09505 PF01654 Cytochrome bd terminal oxidase subunit I CAB88_09510 PF02322 Cytochrome bd terminal oxidase subunit II CAB88_09515 PF00664 ABC transporter transmembrane region CAB88_09515 PF00005 ABC transporter CAB88_09520 PF00664 ABC transporter transmembrane region CAB88_09520 PF00005 ABC transporter CAB88_09530 PF00535 Glycosyl transferase family 2 CAB88_09535 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family CAB88_09540 PF00132 Bacterial transferase hexapeptide (six repeats) CAB88_09565 PF02016 LD-carboxypeptidase N-terminal domain CAB88_09565 PF17676 LD-carboxypeptidase C-terminal domain CAB88_09570 PF00768 D-alanyl-D-alanine carboxypeptidase CAB88_09570 PF07943 Penicillin-binding protein 5, C-terminal domain CAB88_09585 PF01476 LysM domain CAB88_09585 PF00877 NlpC/P60 family CAB88_09595 PF00005 ABC transporter CAB88_09595 PF00664 ABC transporter transmembrane region CAB88_09600 PF00486 Transcriptional regulatory protein, C terminal CAB88_09600 PF00072 Response regulator receiver domain CAB88_09605 PF16736 Single Cache-like CAB88_09605 PF00989 PAS fold CAB88_09605 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CAB88_09605 PF00512 His Kinase A (phospho-acceptor) domain CAB88_09615 PF00106 short chain dehydrogenase CAB88_09625 PF04439 Streptomycin adenylyltransferase CAB88_09630 PF01522 Polysaccharide deacetylase CAB88_09630 PF18627 Peptidoglycan GlcNAc deacetylase N-terminal domain CAB88_09650 PF03447 Homoserine dehydrogenase, NAD binding domain CAB88_09650 PF00742 Homoserine dehydrogenase CAB88_09650 PF01842 ACT domain CAB88_09655 PF00291 Pyridoxal-phosphate dependent enzyme CAB88_09660 PF00288 GHMP kinases N terminal domain CAB88_09660 PF08544 GHMP kinases C terminal CAB88_09675 PF03816 Cell envelope-related transcriptional attenuator domain CAB88_09685 PF00486 Transcriptional regulatory protein, C terminal CAB88_09685 PF00072 Response regulator receiver domain CAB88_09690 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CAB88_09690 PF16736 Single Cache-like CAB88_09690 PF00989 PAS fold CAB88_09690 PF00512 His Kinase A (phospho-acceptor) domain CAB88_09695 PF01522 Polysaccharide deacetylase CAB88_09705 PF02308 MgtC family CAB88_09710 PF00583 Acetyltransferase (GNAT) family CAB88_09715 PF06276 Ferric iron reductase FhuF-like transporter CAB88_09715 PF04183 IucA / IucC family CAB88_09720 PF06276 Ferric iron reductase FhuF-like transporter CAB88_09720 PF04183 IucA / IucC family CAB88_09725 PF13193 AMP-binding enzyme C-terminal domain CAB88_09725 PF00501 AMP-binding enzyme CAB88_09740 PF01261 Xylose isomerase-like TIM barrel CAB88_09745 PF00269 Small, acid-soluble spore proteins, alpha/beta type CAB88_09750 PF07690 Major Facilitator Superfamily CAB88_09755 PF01810 LysE type translocator CAB88_09760 PF00155 Aminotransferase class I and II CAB88_09760 PF00392 Bacterial regulatory proteins, gntR family CAB88_09770 PF01734 Patatin-like phospholipase CAB88_09795 PF00293 NUDIX domain CAB88_09795 PF13344 Haloacid dehalogenase-like hydrolase CAB88_09800 PF02540 NAD synthase CAB88_09805 PF02687 FtsX-like permease family CAB88_09810 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin CAB88_09810 PF18277 AbrB C-terminal domain CAB88_09815 PF00082 Subtilase family CAB88_09820 PF01022 Bacterial regulatory protein, arsR family CAB88_09825 PF00248 Aldo/keto reductase family CAB88_09830 PF07690 Major Facilitator Superfamily CAB88_09850 PF03193 RsgA GTPase CAB88_09855 PF00672 HAMP domain CAB88_09855 PF02743 Cache domain CAB88_09855 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CAB88_09880 PF00210 Ferritin-like domain CAB88_09895 PF00296 Luciferase-like monooxygenase CAB88_09905 PF01593 Flavin containing amine oxidoreductase CAB88_09910 PF13302 Acetyltransferase (GNAT) domain CAB88_09915 PF00248 Aldo/keto reductase family CAB88_09920 PF02492 CobW/HypB/UreG, nucleotide-binding domain CAB88_09920 PF07683 Cobalamin synthesis protein cobW C-terminal domain CAB88_09925 PF00583 Acetyltransferase (GNAT) family CAB88_09930 PF01297 Zinc-uptake complex component A periplasmic CAB88_09940 PF13460 NAD(P)H-binding CAB88_09945 PF00724 NADH:flavin oxidoreductase / NADH oxidase family CAB88_09960 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CAB88_09965 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CAB88_09975 PF00300 Histidine phosphatase superfamily (branch 1) CAB88_09985 PF08757 CotH kinase protein CAB88_09990 PF00293 NUDIX domain CAB88_09995 PF09335 SNARE associated Golgi protein CAB88_10000 PF01943 Polysaccharide biosynthesis protein CAB88_10000 PF14667 Polysaccharide biosynthesis C-terminal domain CAB88_10010 PF03773 Predicted permease CAB88_10015 PF09323 Domain of unknown function (DUF1980) CAB88_10020 PF03061 Thioesterase superfamily CAB88_10030 PF13396 Phospholipase_D-nuclease N-terminal CAB88_10030 PF13091 PLD-like domain CAB88_10045 PF13460 NAD(P)H-binding CAB88_10050 PF04306 Protein of unknown function (DUF456) CAB88_10055 PF00571 CBS domain CAB88_10055 PF03471 Transporter associated domain CAB88_10055 PF01595 Cyclin M transmembrane N-terminal domain CAB88_10080 PF05525 Branched-chain amino acid transport protein CAB88_10085 PF01588 Putative tRNA binding domain CAB88_10105 PF07454 Stage II sporulation protein P (SpoIIP) CAB88_10120 PF02557 D-alanyl-D-alanine carboxypeptidase CAB88_10130 PF01425 Amidase CAB88_10135 PF07690 Major Facilitator Superfamily CAB88_10145 PF01145 SPFH domain / Band 7 family CAB88_10165 PF01047 MarR family CAB88_10170 PF07690 Major Facilitator Superfamily CAB88_10180 PF00842 Alanine racemase, C-terminal domain CAB88_10180 PF01168 Alanine racemase, N-terminal domain CAB88_10200 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase CAB88_10205 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) CAB88_10205 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 CAB88_10210 PF00155 Aminotransferase class I and II CAB88_10210 PF00392 Bacterial regulatory proteins, gntR family CAB88_10240 PF00583 Acetyltransferase (GNAT) family CAB88_10290 PF09579 Sporulation protein YtfJ (Spore_YtfJ) CAB88_10315 PF01209 ubiE/COQ5 methyltransferase family CAB88_10320 PF01268 Formate--tetrahydrofolate ligase CAB88_10330 PF00270 DEAD/DEAH box helicase CAB88_10330 PF00271 Helicase conserved C-terminal domain CAB88_10335 PF01261 Xylose isomerase-like TIM barrel CAB88_10340 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CAB88_10350 PF08240 Alcohol dehydrogenase GroES-like domain CAB88_10350 PF00107 Zinc-binding dehydrogenase CAB88_10355 PF04542 Sigma-70 region 2 CAB88_10355 PF08281 Sigma-70, region 4 CAB88_10370 PF01613 Flavin reductase like domain CAB88_10370 PF00258 Flavodoxin CAB88_10380 PF00255 Glutathione peroxidase CAB88_10385 PF13559 Domain of unknown function (DUF4129) CAB88_10385 PF01841 Transglutaminase-like superfamily CAB88_10385 PF11992 Domain of unknown function (DUF3488) CAB88_10390 PF01882 Protein of unknown function DUF58 CAB88_10395 PF07726 ATPase family associated with various cellular activities (AAA) CAB88_10395 PF17863 AAA lid domain CAB88_10400 PF14710 Respiratory nitrate reductase alpha N-terminal CAB88_10400 PF00384 Molybdopterin oxidoreductase CAB88_10400 PF01568 Molydopterin dinucleotide binding domain CAB88_10405 PF14711 Respiratory nitrate reductase beta C-terminal CAB88_10405 PF13247 4Fe-4S dicluster domain CAB88_10410 PF02613 Nitrate reductase delta subunit CAB88_10415 PF02665 Nitrate reductase gamma subunit CAB88_10420 PF00027 Cyclic nucleotide-binding domain CAB88_10420 PF00325 Bacterial regulatory proteins, crp family CAB88_10425 PF06463 Molybdenum Cofactor Synthesis C CAB88_10425 PF04055 Radical SAM superfamily CAB88_10430 PF00899 ThiF family CAB88_10435 PF00994 Probable molybdopterin binding domain CAB88_10435 PF03454 MoeA C-terminal region (domain IV) CAB88_10435 PF03453 MoeA N-terminal region (domain I and II) CAB88_10440 PF02391 MoaE protein CAB88_10450 PF07690 Major Facilitator Superfamily CAB88_10475 PF01903 CbiX CAB88_10480 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CAB88_10485 PF00355 Rieske [2Fe-2S] domain CAB88_10490 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain CAB88_10490 PF07992 Pyridine nucleotide-disulphide oxidoreductase CAB88_10490 PF18267 Rubredoxin NAD+ reductase C-terminal domain CAB88_10490 PF04324 BFD-like [2Fe-2S] binding domain CAB88_10490 PF01077 Nitrite and sulphite reductase 4Fe-4S domain CAB88_10495 PF04405 Domain of Unknown function (DUF542) CAB88_10495 PF01814 Hemerythrin HHE cation binding domain CAB88_10530 PF04232 Stage V sporulation protein S (SpoVS) CAB88_10540 PF18593 CdiI immunity protein CAB88_10555 PF01966 HD domain CAB88_10560 PF12848 ABC transporter CAB88_10560 PF16326 ABC transporter C-terminal domain CAB88_10560 PF00005 ABC transporter CAB88_10575 PF00436 Single-strand binding protein family CAB88_10590 PF13769 Virulence factor CAB88_10590 PF08712 Scaffold protein Nfu/NifU N terminal CAB88_10600 PF06491 Disulphide isomerase CAB88_10605 PF04445 Putative SAM-dependent methyltransferase CAB88_10610 PF00750 tRNA synthetases class I (R) CAB88_10610 PF05746 DALR anticodon binding domain CAB88_10610 PF03485 Arginyl tRNA synthetase N terminal domain CAB88_10625 PF00133 tRNA synthetases class I (I, L, M and V) CAB88_10625 PF08264 Anticodon-binding domain of tRNA CAB88_10650 PF08245 Mur ligase middle domain CAB88_10650 PF01225 Mur ligase family, catalytic domain CAB88_10650 PF02875 Mur ligase family, glutamate ligase domain CAB88_10660 PF01336 OB-fold nucleic acid binding domain CAB88_10660 PF00152 tRNA synthetases class II (D, K and N) CAB88_10680 PF01580 FtsK/SpoIIIE family CAB88_10680 PF12538 DNA transporter CAB88_10765 PF00209 Sodium:neurotransmitter symporter family CAB88_10780 PF10997 Alternate to MurJ CAB88_10785 PF13419 Haloacid dehalogenase-like hydrolase CAB88_10795 PF00465 Iron-containing alcohol dehydrogenase CAB88_10800 PF01177 Asp/Glu/Hydantoin racemase CAB88_10805 PF01980 tRNA-methyltransferase O CAB88_10810 PF00583 Acetyltransferase (GNAT) family CAB88_10815 PF11188 Protein of unknown function (DUF2975) CAB88_10820 PF13443 Cro/C1-type HTH DNA-binding domain CAB88_10825 PF08645 Polynucleotide kinase 3 phosphatase CAB88_10835 PF00005 ABC transporter CAB88_10840 PF05975 Bacterial ABC transporter protein EcsB CAB88_10845 PF14005 YpjP-like protein CAB88_10850 PF13419 Haloacid dehalogenase-like hydrolase CAB88_10865 PF00144 Beta-lactamase CAB88_10865 PF07930 D-aminopeptidase, domain B CAB88_10870 PF00303 Thymidylate synthase CAB88_10875 PF00186 Dihydrofolate reductase CAB88_10880 PF03717 Penicillin-binding Protein dimerisation domain CAB88_10880 PF05223 NTF2-like N-terminal transpeptidase domain CAB88_10880 PF00905 Penicillin binding protein transpeptidase domain CAB88_10885 PF02525 Flavodoxin-like fold CAB88_10890 PF01553 Acyltransferase CAB88_10895 PF03006 Haemolysin-III related CAB88_10900 PF02416 mttA/Hcf106 family CAB88_10905 PF00902 Sec-independent protein translocase protein (TatC) CAB88_10920 PF02645 Uncharacterised protein, DegV family COG1307 CAB88_10930 PF02630 SCO1/SenC CAB88_10935 PF00011 Hsp20/alpha crystallin family CAB88_10940 PF00733 Asparagine synthase CAB88_10940 PF13537 Glutamine amidotransferase domain CAB88_10955 PF01520 N-acetylmuramoyl-L-alanine amidase CAB88_10955 PF05036 Sporulation related domain CAB88_10960 PF01497 Periplasmic binding protein CAB88_10965 PF01063 Amino-transferase class IV CAB88_10970 PF00881 Nitroreductase family CAB88_10985 PF00857 Isochorismatase family CAB88_10990 PF00293 NUDIX domain CAB88_10995 PF00924 Mechanosensitive ion channel CAB88_11000 PF07730 Histidine kinase CAB88_11000 PF13185 GAF domain CAB88_11005 PF00196 Bacterial regulatory proteins, luxR family CAB88_11005 PF00072 Response regulator receiver domain CAB88_11010 PF01380 SIS domain CAB88_11010 PF01418 Helix-turn-helix domain, rpiR family CAB88_11015 PF02567 Phenazine biosynthesis-like protein CAB88_11020 PF00107 Zinc-binding dehydrogenase CAB88_11020 PF08240 Alcohol dehydrogenase GroES-like domain CAB88_11035 PF00665 Integrase core domain CAB88_11040 PF01695 IstB-like ATP binding protein CAB88_11050 PF00370 FGGY family of carbohydrate kinases, N-terminal domain CAB88_11050 PF02782 FGGY family of carbohydrate kinases, C-terminal domain CAB88_11055 PF02447 GntP family permease CAB88_11060 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase CAB88_11060 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain CAB88_11065 PF10924 Protein of unknown function (DUF2711) CAB88_11080 PF03358 NADPH-dependent FMN reductase CAB88_11095 PF00571 CBS domain CAB88_11095 PF00005 ABC transporter CAB88_11100 PF00528 Binding-protein-dependent transport system inner membrane component CAB88_11105 PF13520 Amino acid permease CAB88_11135 PF00571 CBS domain CAB88_11135 PF03471 Transporter associated domain CAB88_11135 PF01595 Cyclin M transmembrane N-terminal domain CAB88_11140 PF00171 Aldehyde dehydrogenase family CAB88_11145 PF07997 Protein of unknown function (DUF1694) CAB88_11150 PF09385 Histidine kinase N terminal CAB88_11165 PF00202 Aminotransferase class-III CAB88_11170 PF01144 Coenzyme A transferase CAB88_11175 PF01144 Coenzyme A transferase CAB88_11180 PF01546 Peptidase family M20/M25/M40 CAB88_11180 PF07687 Peptidase dimerisation domain CAB88_11185 PF00583 Acetyltransferase (GNAT) family CAB88_11190 PF13426 PAS domain CAB88_11190 PF02954 Bacterial regulatory protein, Fis family CAB88_11190 PF00158 Sigma-54 interaction domain CAB88_11195 PF12544 Lysine-2,3-aminomutase CAB88_11200 PF14122 YokU-like protein, putative antitoxin CAB88_11205 PF06855 YozE SAM-like fold CAB88_11220 PF14162 YozD-like protein CAB88_11230 PF08239 Bacterial SH3 domain CAB88_11230 PF00069 Protein kinase domain CAB88_11240 PF01569 PAP2 superfamily CAB88_11245 PF16916 Dimerisation domain of Zinc Transporter CAB88_11245 PF01545 Cation efflux family CAB88_11250 PF00085 Thioredoxin CAB88_11315 PF10676 Spore germination protein gerPA/gerPF CAB88_11330 PF00106 short chain dehydrogenase CAB88_11350 PF00912 Transglycosylase CAB88_11350 PF00905 Penicillin binding protein transpeptidase domain CAB88_11360 PF07690 Major Facilitator Superfamily CAB88_11365 PF01521 Iron-sulphur cluster biosynthesis CAB88_11370 PF00285 Citrate synthase, C-terminal domain CAB88_11375 PF03972 MmgE/PrpD family CAB88_11385 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CAB88_11385 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CAB88_11385 PF02770 Acyl-CoA dehydrogenase, middle domain CAB88_11390 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase CAB88_11390 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase CAB88_11395 PF00171 Aldehyde dehydrogenase family CAB88_11400 PF01810 LysE type translocator CAB88_11405 PF00378 Enoyl-CoA hydratase/isomerase CAB88_11420 PF12320 Type 5 capsule protein repressor C-terminal domain CAB88_11420 PF00149 Calcineurin-like phosphoesterase CAB88_11425 PF13476 AAA domain CAB88_11435 PF01022 Bacterial regulatory protein, arsR family CAB88_11450 PF07690 Major Facilitator Superfamily CAB88_11460 PF00106 short chain dehydrogenase CAB88_11465 PF00425 chorismate binding enzyme CAB88_11470 PF13193 AMP-binding enzyme C-terminal domain CAB88_11470 PF00501 AMP-binding enzyme CAB88_11475 PF00550 Phosphopantetheine attachment site CAB88_11475 PF00857 Isochorismatase family CAB88_11480 PF00550 Phosphopantetheine attachment site CAB88_11480 PF13193 AMP-binding enzyme C-terminal domain CAB88_11480 PF00668 Condensation domain CAB88_11480 PF00501 AMP-binding enzyme CAB88_11480 PF00975 Thioesterase domain CAB88_11485 PF03621 MbtH-like protein CAB88_11490 PF07690 Major Facilitator Superfamily CAB88_11505 PF00216 Bacterial DNA-binding protein CAB88_11515 PF05163 DinB family CAB88_11520 PF00082 Subtilase family CAB88_11525 PF01235 Sodium:alanine symporter family CAB88_11545 PF01479 S4 domain CAB88_11545 PF00849 RNA pseudouridylate synthase CAB88_11550 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CAB88_11550 PF03129 Anticodon binding domain CAB88_11550 PF02824 TGS domain CAB88_11550 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain CAB88_11555 PF00005 ABC transporter CAB88_11565 PF07690 Major Facilitator Superfamily CAB88_11580 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CAB88_11580 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CAB88_11580 PF00205 Thiamine pyrophosphate enzyme, central domain CAB88_11590 PF00753 Metallo-beta-lactamase superfamily CAB88_11615 PF00027 Cyclic nucleotide-binding domain CAB88_11630 PF01047 MarR family CAB88_11640 PF16123 Hydroxyacylglutathione hydrolase C-terminus CAB88_11640 PF00753 Metallo-beta-lactamase superfamily CAB88_11650 PF03176 MMPL family CAB88_11660 PF00302 Chloramphenicol acetyltransferase CAB88_11675 PF00583 Acetyltransferase (GNAT) family CAB88_11715 PF13302 Acetyltransferase (GNAT) domain CAB88_11725 PF00313 'Cold-shock' DNA-binding domain CAB88_11745 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CAB88_11745 PF03466 LysR substrate binding domain CAB88_11750 PF02774 Semialdehyde dehydrogenase, dimerisation domain CAB88_11750 PF01118 Semialdehyde dehydrogenase, NAD binding domain CAB88_11770 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CAB88_11770 PF03466 LysR substrate binding domain CAB88_11775 PF03473 MOSC domain CAB88_11775 PF03475 3-alpha domain CAB88_11790 PF00005 ABC transporter CAB88_11790 PF00664 ABC transporter transmembrane region CAB88_11795 PF00005 ABC transporter CAB88_11795 PF00664 ABC transporter transmembrane region CAB88_11850 PF00589 Phage integrase family CAB88_11855 PF00561 alpha/beta hydrolase fold CAB88_11880 PF10668 Phage terminase small subunit CAB88_11895 PF01510 N-acetylmuramoyl-L-alanine amidase CAB88_11905 PF04740 LXG domain of WXG superfamily CAB88_11905 PF14436 Bacterial EndoU nuclease CAB88_11920 PF01810 LysE type translocator CAB88_11925 PF01381 Helix-turn-helix CAB88_11925 PF07883 Cupin domain CAB88_11960 PF07992 Pyridine nucleotide-disulphide oxidoreductase CAB88_11960 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CAB88_11965 PF08281 Sigma-70, region 4 CAB88_11965 PF04542 Sigma-70 region 2 CAB88_11965 PF12680 SnoaL-like domain CAB88_11995 PF02638 Glycosyl hydrolase-like 10 CAB88_12005 PF02378 Phosphotransferase system, EIIC CAB88_12015 PF03702 Anhydro-N-acetylmuramic acid kinase CAB88_12020 PF01869 BadF/BadG/BcrA/BcrD ATPase family CAB88_12025 PF02660 Glycerol-3-phosphate acyltransferase CAB88_12030 PF00266 Aminotransferase class-V CAB88_12035 PF00291 Pyridoxal-phosphate dependent enzyme CAB88_12040 PF01047 MarR family CAB88_12045 PF07690 Major Facilitator Superfamily CAB88_12055 PF00753 Metallo-beta-lactamase superfamily CAB88_12055 PF16123 Hydroxyacylglutathione hydrolase C-terminus CAB88_12065 PF00270 DEAD/DEAH box helicase CAB88_12065 PF00271 Helicase conserved C-terminal domain CAB88_12080 PF01695 IstB-like ATP binding protein CAB88_12085 PF00665 Integrase core domain CAB88_12095 PF00440 Bacterial regulatory proteins, tetR family CAB88_12095 PF16925 Tetracyclin repressor-like, C-terminal domain CAB88_12115 PF09313 Domain of unknown function (DUF1971) CAB88_12115 PF03848 Tellurite resistance protein TehB CAB88_12125 PF08241 Methyltransferase domain CAB88_12130 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CAB88_12130 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CAB88_12130 PF00205 Thiamine pyrophosphate enzyme, central domain CAB88_12135 PF01047 MarR family CAB88_12140 PF00300 Histidine phosphatase superfamily (branch 1) CAB88_12150 PF14171 Toxin SpoIISA, type II toxin-antitoxin system CAB88_12185 PF07687 Peptidase dimerisation domain CAB88_12185 PF01546 Peptidase family M20/M25/M40 CAB88_12200 PF04371 Porphyromonas-type peptidyl-arginine deiminase CAB88_12210 PF00196 Bacterial regulatory proteins, luxR family CAB88_12210 PF00072 Response regulator receiver domain CAB88_12220 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin CAB88_12220 PF18277 AbrB C-terminal domain CAB88_12230 PF01925 Sulfite exporter TauE/SafE CAB88_12235 PF00132 Bacterial transferase hexapeptide (six repeats) CAB88_12240 PF00768 D-alanyl-D-alanine carboxypeptidase CAB88_12240 PF07943 Penicillin-binding protein 5, C-terminal domain CAB88_12255 PF07690 Major Facilitator Superfamily CAB88_12260 PF00550 Phosphopantetheine attachment site CAB88_12260 PF00668 Condensation domain CAB88_12260 PF13193 AMP-binding enzyme C-terminal domain CAB88_12260 PF00501 AMP-binding enzyme CAB88_12265 PF13193 AMP-binding enzyme C-terminal domain CAB88_12265 PF07993 Male sterility protein CAB88_12265 PF00550 Phosphopantetheine attachment site CAB88_12265 PF00668 Condensation domain CAB88_12265 PF00501 AMP-binding enzyme CAB88_12270 PF00550 Phosphopantetheine attachment site CAB88_12270 PF00668 Condensation domain CAB88_12270 PF13193 AMP-binding enzyme C-terminal domain CAB88_12270 PF00501 AMP-binding enzyme CAB88_12275 PF01648 4'-phosphopantetheinyl transferase superfamily CAB88_12280 PF00975 Thioesterase domain CAB88_12295 PF01235 Sodium:alanine symporter family CAB88_12300 PF04960 Glutaminase CAB88_12305 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CAB88_12310 PF00072 Response regulator receiver domain CAB88_12310 PF08664 YcbB domain CAB88_12320 PF03323 Bacillus/Clostridium GerA spore germination protein CAB88_12325 PF03845 Spore germination protein CAB88_12330 PF05504 Spore germination B3/ GerAC like, C-terminal CAB88_12335 PF14748 Pyrroline-5-carboxylate reductase dimerisation CAB88_12335 PF03807 NADP oxidoreductase coenzyme F420-dependent CAB88_12340 PF13520 Amino acid permease CAB88_12345 PF02151 UvrB/uvrC motif CAB88_12345 PF12826 Helix-hairpin-helix motif CAB88_12345 PF08459 UvrC Helix-hairpin-helix N-terminal CAB88_12345 PF01541 GIY-YIG catalytic domain CAB88_12370 PF12833 Helix-turn-helix domain CAB88_12370 PF17853 GGDEF-like domain CAB88_12385 PF05791 Bacillus haemolytic enterotoxin (HBL) CAB88_12390 PF05791 Bacillus haemolytic enterotoxin (HBL) CAB88_12395 PF00989 PAS fold CAB88_12395 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CAB88_12395 PF13188 PAS domain CAB88_12395 PF13426 PAS domain CAB88_12395 PF00512 His Kinase A (phospho-acceptor) domain CAB88_12400 PF03323 Bacillus/Clostridium GerA spore germination protein CAB88_12405 PF08386 TAP-like protein CAB88_12405 PF00561 alpha/beta hydrolase fold CAB88_12420 PF00269 Small, acid-soluble spore proteins, alpha/beta type CAB88_12465 PF01734 Patatin-like phospholipase CAB88_12465 PF00027 Cyclic nucleotide-binding domain CAB88_12470 PF02371 Transposase IS116/IS110/IS902 family CAB88_12470 PF01548 Transposase CAB88_12485 PF05223 NTF2-like N-terminal transpeptidase domain CAB88_12485 PF03717 Penicillin-binding Protein dimerisation domain CAB88_12485 PF00905 Penicillin binding protein transpeptidase domain CAB88_12490 PF08281 Sigma-70, region 4 CAB88_12490 PF04542 Sigma-70 region 2 CAB88_12500 PF03717 Penicillin-binding Protein dimerisation domain CAB88_12500 PF00905 Penicillin binding protein transpeptidase domain CAB88_12520 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) CAB88_12520 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 CAB88_12525 PF00149 Calcineurin-like phosphoesterase CAB88_12535 PF00005 ABC transporter CAB88_12545 PF00440 Bacterial regulatory proteins, tetR family CAB88_12545 PF08359 YsiA-like protein, C-terminal region CAB88_12560 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CAB88_12560 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CAB88_12560 PF02770 Acyl-CoA dehydrogenase, middle domain CAB88_12565 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain CAB88_12565 PF02785 Biotin carboxylase C-terminal domain CAB88_12565 PF00289 Biotin carboxylase, N-terminal domain CAB88_12570 PF00364 Biotin-requiring enzyme CAB88_12575 PF00682 HMGL-like CAB88_12580 PF00378 Enoyl-CoA hydratase/isomerase CAB88_12585 PF01039 Carboxyl transferase domain CAB88_12590 PF13193 AMP-binding enzyme C-terminal domain CAB88_12590 PF00501 AMP-binding enzyme CAB88_12590 PF16177 Acetyl-coenzyme A synthetase N-terminus CAB88_12620 PF00768 D-alanyl-D-alanine carboxypeptidase CAB88_12620 PF07943 Penicillin-binding protein 5, C-terminal domain CAB88_12625 PF00512 His Kinase A (phospho-acceptor) domain CAB88_12625 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CAB88_12630 PF00486 Transcriptional regulatory protein, C terminal CAB88_12630 PF00072 Response regulator receiver domain CAB88_12635 PF01966 HD domain CAB88_12650 PF01048 Phosphorylase superfamily CAB88_12665 PF01447 Thermolysin metallopeptidase, catalytic domain CAB88_12665 PF02868 Thermolysin metallopeptidase, alpha-helical domain CAB88_12665 PF07504 Fungalysin/Thermolysin Propeptide Motif CAB88_12665 PF03413 Peptidase propeptide and YPEB domain CAB88_12670 PF17853 GGDEF-like domain CAB88_12670 PF12833 Helix-turn-helix domain CAB88_12685 PF16569 Gram-positive pilin backbone subunit 2, Cna-B-like domain CAB88_12685 PF17802 Prealbumin-like fold domain CAB88_12685 PF00746 LPXTG cell wall anchor motif CAB88_12685 PF18002 T6 antigen Ig like domain CAB88_12700 PF00005 ABC transporter CAB88_12700 PF17760 UvrA interaction domain CAB88_12700 PF17755 UvrA DNA-binding domain CAB88_12705 PF00376 MerR family regulatory protein CAB88_12705 PF09278 MerR, DNA binding CAB88_12720 PF00665 Integrase core domain CAB88_12725 PF01695 IstB-like ATP binding protein CAB88_12750 PF01636 Phosphotransferase enzyme family CAB88_12755 PF12833 Helix-turn-helix domain CAB88_12770 PF00155 Aminotransferase class I and II CAB88_12770 PF00392 Bacterial regulatory proteins, gntR family CAB88_12780 PF11794 4-hydroxyphenylacetate 3-hydroxylase N terminal CAB88_12780 PF03241 4-hydroxyphenylacetate 3-hydroxylase C terminal CAB88_12795 PF08240 Alcohol dehydrogenase GroES-like domain CAB88_12795 PF00107 Zinc-binding dehydrogenase CAB88_12805 PF04239 Protein of unknown function (DUF421) CAB88_12810 PF08241 Methyltransferase domain CAB88_12815 PF01965 DJ-1/PfpI family CAB88_12825 PF08450 SMP-30/Gluconolactonase/LRE-like region CAB88_12835 PF01921 tRNA synthetases class I (K) CAB88_12840 PF07486 Cell Wall Hydrolase CAB88_12850 PF00486 Transcriptional regulatory protein, C terminal CAB88_12850 PF00072 Response regulator receiver domain CAB88_12855 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CAB88_12895 PF00005 ABC transporter CAB88_12900 PF02687 FtsX-like permease family CAB88_12920 PF00742 Homoserine dehydrogenase CAB88_12920 PF03447 Homoserine dehydrogenase, NAD binding domain CAB88_12920 PF01842 ACT domain CAB88_12925 PF00392 Bacterial regulatory proteins, gntR family CAB88_12925 PF00155 Aminotransferase class I and II CAB88_12930 PF07478 D-ala D-ala ligase C-terminus CAB88_12930 PF01820 D-ala D-ala ligase N-terminus CAB88_12935 PF03070 TENA/THI-4/PQQC family CAB88_12960 PF00589 Phage integrase family CAB88_12960 PF14659 Phage integrase, N-terminal SAM-like domain CAB88_13015 PF07319 Primosomal protein DnaI N-terminus CAB88_13015 PF01695 IstB-like ATP binding protein CAB88_13040 PF01609 Transposase DDE domain CAB88_13120 PF00589 Phage integrase family CAB88_13155 PF10668 Phage terminase small subunit CAB88_13170 PF00574 Clp protease CAB88_13230 PF01548 Transposase CAB88_13230 PF02371 Transposase IS116/IS110/IS902 family CAB88_13245 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase CAB88_13245 PF13457 GW (Gly-Tryp) dipeptide domain CAB88_13300 PF00067 Cytochrome P450 CAB88_13315 PF00132 Bacterial transferase hexapeptide (six repeats) CAB88_13320 PF07561 Domain of Unknown Function (DUF1540) CAB88_13330 PF00067 Cytochrome P450 CAB88_13345 PF00989 PAS fold CAB88_13345 PF13188 PAS domain CAB88_13345 PF13426 PAS domain CAB88_13345 PF00512 His Kinase A (phospho-acceptor) domain CAB88_13345 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CAB88_13360 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase CAB88_13365 PF01177 Asp/Glu/Hydantoin racemase CAB88_13370 PF07155 ECF-type riboflavin transporter, S component CAB88_13375 PF00005 ABC transporter CAB88_13375 PF12558 ATP-binding cassette cobalt transporter CAB88_13390 PF00512 His Kinase A (phospho-acceptor) domain CAB88_13390 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CAB88_13435 PF01695 IstB-like ATP binding protein CAB88_13440 PF00665 Integrase core domain CAB88_13445 PF13344 Haloacid dehalogenase-like hydrolase CAB88_13445 PF00293 NUDIX domain CAB88_13465 PF08240 Alcohol dehydrogenase GroES-like domain CAB88_13465 PF00107 Zinc-binding dehydrogenase CAB88_13470 PF01569 PAP2 superfamily CAB88_13535 PF07690 Major Facilitator Superfamily CAB88_13555 PF03009 Glycerophosphoryl diester phosphodiesterase family CAB88_13575 PF00392 Bacterial regulatory proteins, gntR family CAB88_13575 PF00155 Aminotransferase class I and II CAB88_13580 PF00892 EamA-like transporter family CAB88_13585 PF01270 Glycosyl hydrolases family 8 CAB88_13590 PF01156 Inosine-uridine preferring nucleoside hydrolase CAB88_13605 PF00293 NUDIX domain CAB88_13605 PF13344 Haloacid dehalogenase-like hydrolase CAB88_13625 PF07690 Major Facilitator Superfamily CAB88_13635 PF00293 NUDIX domain CAB88_13635 PF09297 NADH pyrophosphatase zinc ribbon domain CAB88_13640 PF02768 DNA polymerase III beta subunit, C-terminal domain CAB88_13640 PF02767 DNA polymerase III beta subunit, central domain CAB88_13640 PF00712 DNA polymerase III beta subunit, N-terminal domain CAB88_13650 PF12706 Beta-lactamase superfamily domain CAB88_13675 PF13700 Domain of unknown function (DUF4158) CAB88_13675 PF01526 Tn3 transposase DDE domain CAB88_13680 PF00589 Phage integrase family CAB88_13680 PF02899 Phage integrase, N-terminal SAM-like domain CAB88_13685 PF01609 Transposase DDE domain CAB88_13690 PF09234 Domain of unknown function (DUF1963) CAB88_13720 PF01734 Patatin-like phospholipase CAB88_13725 PF08000 Bacterial PH domain CAB88_13735 PF12867 DinB superfamily CAB88_13750 PF02673 Bacitracin resistance protein BacA CAB88_13760 PF01541 GIY-YIG catalytic domain CAB88_13800 PF01266 FAD dependent oxidoreductase CAB88_13830 PF00072 Response regulator receiver domain CAB88_13830 PF00486 Transcriptional regulatory protein, C terminal CAB88_13835 PF00512 His Kinase A (phospho-acceptor) domain CAB88_13835 PF16736 Single Cache-like CAB88_13835 PF00989 PAS fold CAB88_13835 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CAB88_13850 PF01037 Lrp/AsnC ligand binding domain CAB88_13870 PF00005 ABC transporter CAB88_13875 PF12704 MacB-like periplasmic core domain CAB88_13875 PF02687 FtsX-like permease family CAB88_13885 PF07859 alpha/beta hydrolase fold CAB88_13890 PF00282 Pyridoxal-dependent decarboxylase conserved domain CAB88_13895 PF13193 AMP-binding enzyme C-terminal domain CAB88_13895 PF00550 Phosphopantetheine attachment site CAB88_13895 PF00668 Condensation domain CAB88_13895 PF00501 AMP-binding enzyme CAB88_13905 PF03714 Bacterial pullanase-associated domain CAB88_13905 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) CAB88_13905 PF00128 Alpha amylase, catalytic domain CAB88_13910 PF07504 Fungalysin/Thermolysin Propeptide Motif CAB88_13910 PF03413 Peptidase propeptide and YPEB domain CAB88_13910 PF01447 Thermolysin metallopeptidase, catalytic domain CAB88_13910 PF02868 Thermolysin metallopeptidase, alpha-helical domain CAB88_13915 PF02872 5'-nucleotidase, C-terminal domain CAB88_13915 PF00149 Calcineurin-like phosphoesterase CAB88_13930 PF00344 SecY translocase CAB88_13935 PF02909 Tetracyclin repressor-like, C-terminal domain CAB88_13935 PF00440 Bacterial regulatory proteins, tetR family CAB88_13940 PF01494 FAD binding domain CAB88_13945 PF00892 EamA-like transporter family CAB88_13950 PF00392 Bacterial regulatory proteins, gntR family CAB88_13950 PF00155 Aminotransferase class I and II CAB88_13955 PF08240 Alcohol dehydrogenase GroES-like domain CAB88_13955 PF00107 Zinc-binding dehydrogenase CAB88_13960 PF00561 alpha/beta hydrolase fold CAB88_13985 PF06081 Aromatic acid exporter family member 1 CAB88_14000 PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) CAB88_14005 PF03413 Peptidase propeptide and YPEB domain CAB88_14005 PF14620 YpeB sporulation CAB88_14010 PF01471 Putative peptidoglycan binding domain CAB88_14010 PF07486 Cell Wall Hydrolase CAB88_14030 PF03301 Tryptophan 2,3-dioxygenase CAB88_14035 PF04199 Putative cyclase CAB88_14040 PF00266 Aminotransferase class-V CAB88_14045 PF08359 YsiA-like protein, C-terminal region CAB88_14045 PF00440 Bacterial regulatory proteins, tetR family CAB88_14050 PF00293 NUDIX domain CAB88_14050 PF13344 Haloacid dehalogenase-like hydrolase CAB88_14080 PF02954 Bacterial regulatory protein, Fis family CAB88_14080 PF01590 GAF domain CAB88_14080 PF00158 Sigma-54 interaction domain CAB88_14095 PF13302 Acetyltransferase (GNAT) domain CAB88_14100 PF00455 DeoR C terminal sensor domain CAB88_14100 PF08220 DeoR-like helix-turn-helix domain CAB88_14115 PF02082 Transcriptional regulator CAB88_14130 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CAB88_14130 PF07992 Pyridine nucleotide-disulphide oxidoreductase CAB88_14135 PF02817 e3 binding domain CAB88_14135 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) CAB88_14135 PF00364 Biotin-requiring enzyme CAB88_14140 PF02780 Transketolase, C-terminal domain CAB88_14140 PF02779 Transketolase, pyrimidine binding domain CAB88_14145 PF00676 Dehydrogenase E1 component CAB88_14155 PF00106 short chain dehydrogenase CAB88_14160 PF04229 GrpB protein CAB88_14160 PF13673 Acetyltransferase (GNAT) domain CAB88_14200 PF00528 Binding-protein-dependent transport system inner membrane component CAB88_14205 PF00571 CBS domain CAB88_14205 PF00005 ABC transporter CAB88_14210 PF04069 Substrate binding domain of ABC-type glycine betaine transport system CAB88_14215 PF00574 Clp protease CAB88_14230 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) CAB88_14235 PF13673 Acetyltransferase (GNAT) domain CAB88_14240 PF18416 N-acetylglucosamine binding protein domain 2 CAB88_14240 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading CAB88_14245 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase CAB88_14250 PF03781 Sulfatase-modifying factor enzyme 1 CAB88_14260 PF10990 Protein of unknown function (DUF2809) CAB88_14270 PF04237 YjbR CAB88_14320 PF00583 Acetyltransferase (GNAT) family CAB88_14325 PF13538 UvrD-like helicase C-terminal domain CAB88_14350 PF09382 RQC domain CAB88_14350 PF00270 DEAD/DEAH box helicase CAB88_14350 PF00271 Helicase conserved C-terminal domain CAB88_14350 PF16124 RecQ zinc-binding CAB88_14350 PF00570 HRDC domain CAB88_14400 PF01368 DHH family CAB88_14400 PF02833 DHHA2 domain CAB88_14405 PF18416 N-acetylglucosamine binding protein domain 2 CAB88_14405 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading CAB88_14420 PF02627 Carboxymuconolactone decarboxylase family CAB88_14425 PF01235 Sodium:alanine symporter family CAB88_14430 PF00171 Aldehyde dehydrogenase family CAB88_14435 PF00701 Dihydrodipicolinate synthetase family CAB88_14440 PF05544 Proline racemase CAB88_14445 PF05544 Proline racemase CAB88_14450 PF01266 FAD dependent oxidoreductase CAB88_14455 PF02954 Bacterial regulatory protein, Fis family CAB88_14455 PF00158 Sigma-54 interaction domain CAB88_14455 PF13188 PAS domain CAB88_14460 PF07992 Pyridine nucleotide-disulphide oxidoreductase CAB88_14460 PF04324 BFD-like [2Fe-2S] binding domain CAB88_14470 PF07992 Pyridine nucleotide-disulphide oxidoreductase CAB88_14470 PF04324 BFD-like [2Fe-2S] binding domain CAB88_14485 PF08876 Domain of unknown function (DUF1836) CAB88_14495 PF01966 HD domain CAB88_14500 PF09335 SNARE associated Golgi protein CAB88_14510 PF04914 DltD protein CAB88_14520 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CAB88_14525 PF00877 NlpC/P60 family CAB88_14525 PF18348 Bacterial dipeptidyl-peptidase Sh3 domain CAB88_14530 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain CAB88_14530 PF13378 Enolase C-terminal domain-like CAB88_14545 PF00248 Aldo/keto reductase family CAB88_14575 PF08530 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain CAB88_14575 PF02129 X-Pro dipeptidyl-peptidase (S15 family) CAB88_14585 PF00512 His Kinase A (phospho-acceptor) domain CAB88_14585 PF00672 HAMP domain CAB88_14585 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CAB88_14590 PF00072 Response regulator receiver domain CAB88_14590 PF00486 Transcriptional regulatory protein, C terminal CAB88_14605 PF13419 Haloacid dehalogenase-like hydrolase CAB88_14610 PF01048 Phosphorylase superfamily CAB88_14620 PF03808 Glycosyl transferase WecB/TagA/CpsF family CAB88_14625 PF08439 Oligopeptidase F CAB88_14625 PF01432 Peptidase family M3 CAB88_14630 PF02645 Uncharacterised protein, DegV family COG1307 CAB88_14655 PF07690 Major Facilitator Superfamily CAB88_14665 PF04519 Polymer-forming cytoskeletal CAB88_14670 PF13171 Protein of unknown function (DUF4004) CAB88_14675 PF12793 Sugar transport-related sRNA regulator N-term CAB88_14675 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CAB88_14680 PF07690 Major Facilitator Superfamily CAB88_14705 PF04226 Transglycosylase associated protein CAB88_14720 PF08241 Methyltransferase domain CAB88_14760 PF00155 Aminotransferase class I and II CAB88_14765 PF07977 FabA-like domain CAB88_14770 PF03630 Fumble CAB88_14790 PF00005 ABC transporter CAB88_14850 PF01594 AI-2E family transporter CAB88_14865 PF00296 Luciferase-like monooxygenase CAB88_14870 PF00528 Binding-protein-dependent transport system inner membrane component CAB88_14875 PF09084 NMT1/THI5 like CAB88_14880 PF00005 ABC transporter CAB88_14915 PF02522 Aminoglycoside 3-N-acetyltransferase CAB88_14925 PF13536 Putative multidrug resistance efflux transporter CAB88_14935 PF12867 DinB superfamily CAB88_14955 PF08713 DNA alkylation repair enzyme CAB88_14960 PF00291 Pyridoxal-phosphate dependent enzyme CAB88_14965 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CAB88_14975 PF01965 DJ-1/PfpI family CAB88_14980 PF01522 Polysaccharide deacetylase CAB88_14990 PF03741 Integral membrane protein TerC family CAB88_14995 PF00884 Sulfatase CAB88_15000 PF12848 ABC transporter CAB88_15000 PF00005 ABC transporter CAB88_15005 PF03176 MMPL family CAB88_15010 PF16295 Tetracyclin repressor-like, C-terminal domain CAB88_15010 PF00440 Bacterial regulatory proteins, tetR family CAB88_15020 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) CAB88_15025 PF02153 Prephenate dehydrogenase CAB88_15025 PF01842 ACT domain CAB88_15030 PF00155 Aminotransferase class I and II CAB88_15035 PF01264 Chorismate synthase CAB88_15045 PF00793 DAHP synthetase I family CAB88_15045 PF01817 Chorismate mutase type II CAB88_15095 PF01476 LysM domain CAB88_15095 PF06725 3D domain CAB88_15110 PF01565 FAD binding domain CAB88_15110 PF08031 Berberine and berberine like CAB88_15130 PF06039 Malate:quinone oxidoreductase (Mqo) CAB88_15135 PF13407 Periplasmic binding protein domain CAB88_15140 PF02653 Branched-chain amino acid transport system / permease component CAB88_15145 PF02653 Branched-chain amino acid transport system / permease component CAB88_15155 PF00325 Bacterial regulatory proteins, crp family CAB88_15155 PF04198 Putative sugar-binding domain CAB88_15160 PF00370 FGGY family of carbohydrate kinases, N-terminal domain CAB88_15160 PF02782 FGGY family of carbohydrate kinases, C-terminal domain CAB88_15170 PF01791 DeoC/LacD family aldolase CAB88_15180 PF03992 Antibiotic biosynthesis monooxygenase CAB88_15190 PF01022 Bacterial regulatory protein, arsR family CAB88_15195 PF01773 Na+ dependent nucleoside transporter N-terminus CAB88_15195 PF07662 Na+ dependent nucleoside transporter C-terminus CAB88_15200 PF00171 Aldehyde dehydrogenase family CAB88_15205 PF01472 PUA domain CAB88_15205 PF00696 Amino acid kinase family CAB88_15215 PF03807 NADP oxidoreductase coenzyme F420-dependent CAB88_15215 PF14748 Pyrroline-5-carboxylate reductase dimerisation CAB88_15220 PF01546 Peptidase family M20/M25/M40 CAB88_15225 PF09339 IclR helix-turn-helix domain CAB88_15225 PF01614 Bacterial transcriptional regulator CAB88_15235 PF00324 Amino acid permease CAB88_15255 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit CAB88_15265 PF00487 Fatty acid desaturase CAB88_15270 PF05547 Immune inhibitor A peptidase M6 CAB88_15275 PF04294 VanW like protein CAB88_15280 PF00245 Alkaline phosphatase CAB88_15285 PF11188 Protein of unknown function (DUF2975) CAB88_15290 PF13443 Cro/C1-type HTH DNA-binding domain CAB88_15310 PF13302 Acetyltransferase (GNAT) domain CAB88_15315 PF12681 Glyoxalase-like domain CAB88_15340 PF07726 ATPase family associated with various cellular activities (AAA) CAB88_15340 PF17863 AAA lid domain CAB88_15355 PF07690 Major Facilitator Superfamily CAB88_15360 PF00202 Aminotransferase class-III CAB88_15365 PF00199 Catalase CAB88_15365 PF06628 Catalase-related immune-responsive CAB88_15370 PF08453 Peptidase family M9 N-terminal CAB88_15370 PF04151 Bacterial pre-peptidase C-terminal domain CAB88_15370 PF01752 Collagenase CAB88_15370 PF18496 Collagenase G catalytic helper subdomain CAB88_15380 PF13382 Adenine deaminase C-terminal domain CAB88_15380 PF01979 Amidohydrolase family CAB88_15385 PF00144 Beta-lactamase CAB88_15400 PF00881 Nitroreductase family CAB88_15405 PF01047 MarR family CAB88_15415 PF00679 Elongation factor G C-terminus CAB88_15415 PF14492 Elongation Factor G, domain II CAB88_15415 PF03764 Elongation factor G, domain IV CAB88_15415 PF00009 Elongation factor Tu GTP binding domain CAB88_15430 PF05406 WGR domain CAB88_15435 PF16363 GDP-mannose 4,6 dehydratase CAB88_15440 PF01695 IstB-like ATP binding protein CAB88_15445 PF00665 Integrase core domain CAB88_15460 PF12833 Helix-turn-helix domain CAB88_15465 PF00583 Acetyltransferase (GNAT) family CAB88_15480 PF00892 EamA-like transporter family CAB88_15485 PF00392 Bacterial regulatory proteins, gntR family CAB88_15485 PF00155 Aminotransferase class I and II CAB88_15490 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 CAB88_15495 PF13031 Protein of unknown function (DUF3892) CAB88_15530 PF01925 Sulfite exporter TauE/SafE CAB88_15540 PF00324 Amino acid permease CAB88_15550 PF08713 DNA alkylation repair enzyme CAB88_15560 PF00512 His Kinase A (phospho-acceptor) domain CAB88_15560 PF18698 Histidine kinase sensor domain CAB88_15560 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CAB88_15560 PF00672 HAMP domain CAB88_15560 PF00989 PAS fold CAB88_15565 PF00486 Transcriptional regulatory protein, C terminal CAB88_15565 PF00072 Response regulator receiver domain CAB88_15575 PF12704 MacB-like periplasmic core domain CAB88_15575 PF00005 ABC transporter CAB88_15575 PF02687 FtsX-like permease family CAB88_15590 PF00293 NUDIX domain CAB88_15600 PF04989 Cephalosporin hydroxylase CAB88_15605 PF10502 Signal peptidase, peptidase S26 CAB88_15615 PF02146 Sir2 family CAB88_15620 PF01470 Pyroglutamyl peptidase CAB88_15635 PF03746 LamB/YcsF family CAB88_15640 PF02626 Carboxyltransferase domain, subdomain A and B CAB88_15645 PF02682 Carboxyltransferase domain, subdomain C and D CAB88_15650 PF01614 Bacterial transcriptional regulator CAB88_15650 PF09339 IclR helix-turn-helix domain CAB88_15660 PF10502 Signal peptidase, peptidase S26 CAB88_15665 PF03932 CutC family CAB88_15680 PF08028 Acyl-CoA dehydrogenase, C-terminal domain CAB88_15680 PF02770 Acyl-CoA dehydrogenase, middle domain CAB88_15680 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CAB88_15710 PF10903 Protein of unknown function (DUF2691) CAB88_15715 PF02915 Rubrerythrin CAB88_15730 PF00440 Bacterial regulatory proteins, tetR family CAB88_15735 PF05547 Immune inhibitor A peptidase M6 CAB88_15740 PF00144 Beta-lactamase CAB88_15750 PF17936 Bacterial Ig domain CAB88_15750 PF00149 Calcineurin-like phosphoesterase CAB88_15750 PF02872 5'-nucleotidase, C-terminal domain CAB88_15755 PF00561 alpha/beta hydrolase fold CAB88_15760 PF00857 Isochorismatase family CAB88_15775 PF01979 Amidohydrolase family CAB88_15780 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CAB88_15780 PF03466 LysR substrate binding domain CAB88_15785 PF01047 MarR family CAB88_15790 PF01544 CorA-like Mg2+ transporter protein CAB88_15835 PF03845 Spore germination protein CAB88_15855 PF03073 TspO/MBR family CAB88_15860 PF00875 DNA photolyase CAB88_15860 PF03441 FAD binding domain of DNA photolyase CAB88_15870 PF10070 Uncharacterized protein conserved in bacteria (DUF2309) CAB88_15875 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus CAB88_15875 PF00361 Proton-conducting membrane transporter CAB88_15880 PF10057 Uncharacterized conserved protein (DUF2294) CAB88_15885 PF01522 Polysaccharide deacetylase CAB88_15895 PF01040 UbiA prenyltransferase family CAB88_15900 PF01451 Low molecular weight phosphotyrosine protein phosphatase CAB88_15905 PF01758 Sodium Bile acid symporter family CAB88_15910 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CAB88_15915 PF01022 Bacterial regulatory protein, arsR family CAB88_15930 PF01872 RibD C-terminal domain CAB88_15940 PF18665 Tetracyclin repressor-like, C-terminal domain CAB88_15940 PF00440 Bacterial regulatory proteins, tetR family CAB88_15990 PF07690 Major Facilitator Superfamily CAB88_15995 PF00440 Bacterial regulatory proteins, tetR family CAB88_16005 PF01037 Lrp/AsnC ligand binding domain CAB88_16020 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CAB88_16050 PF00144 Beta-lactamase CAB88_16055 PF00144 Beta-lactamase CAB88_16060 PF08803 Putative mono-oxygenase ydhR CAB88_16070 PF12802 MarR family CAB88_16090 PF00486 Transcriptional regulatory protein, C terminal CAB88_16090 PF00072 Response regulator receiver domain CAB88_16095 PF00672 HAMP domain CAB88_16095 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CAB88_16095 PF00512 His Kinase A (phospho-acceptor) domain CAB88_16125 PF00196 Bacterial regulatory proteins, luxR family CAB88_16125 PF00072 Response regulator receiver domain CAB88_16140 PF00512 His Kinase A (phospho-acceptor) domain CAB88_16140 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CAB88_16145 PF00072 Response regulator receiver domain CAB88_16145 PF00486 Transcriptional regulatory protein, C terminal CAB88_16170 PF00175 Oxidoreductase NAD-binding domain CAB88_16170 PF00067 Cytochrome P450 CAB88_16170 PF00258 Flavodoxin CAB88_16170 PF00667 FAD binding domain CAB88_16175 PF07690 Major Facilitator Superfamily CAB88_16185 PF00326 Prolyl oligopeptidase family CAB88_16200 PF00291 Pyridoxal-phosphate dependent enzyme CAB88_16220 PF02073 Thermophilic metalloprotease (M29) CAB88_16230 PF01139 tRNA-splicing ligase RtcB CAB88_16240 PF04072 Leucine carboxyl methyltransferase CAB88_16255 PF08031 Berberine and berberine like CAB88_16255 PF01565 FAD binding domain CAB88_16260 PF00005 ABC transporter CAB88_16265 PF02687 FtsX-like permease family CAB88_16285 PF00512 His Kinase A (phospho-acceptor) domain CAB88_16285 PF00672 HAMP domain CAB88_16285 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CAB88_16290 PF00486 Transcriptional regulatory protein, C terminal CAB88_16290 PF00072 Response regulator receiver domain CAB88_16295 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) CAB88_16295 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 CAB88_16310 PF17676 LD-carboxypeptidase C-terminal domain CAB88_16310 PF02016 LD-carboxypeptidase N-terminal domain CAB88_16330 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CAB88_16330 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CAB88_16330 PF01842 ACT domain CAB88_16335 PF00266 Aminotransferase class-V CAB88_16350 PF07883 Cupin domain CAB88_16360 PF12833 Helix-turn-helix domain CAB88_16360 PF01497 Periplasmic binding protein CAB88_16365 PF01804 Penicillin amidase CAB88_16380 PF01471 Putative peptidoglycan binding domain CAB88_16380 PF01510 N-acetylmuramoyl-L-alanine amidase CAB88_16380 PF01476 LysM domain CAB88_16400 PF02557 D-alanyl-D-alanine carboxypeptidase CAB88_16405 PF09587 Bacterial capsule synthesis protein PGA_cap CAB88_16410 PF14044 NETI protein CAB88_16415 PF07690 Major Facilitator Superfamily CAB88_16425 PF12697 Alpha/beta hydrolase family CAB88_16430 PF01047 MarR family CAB88_16435 PF07690 Major Facilitator Superfamily CAB88_16450 PF00144 Beta-lactamase CAB88_16455 PF01289 Thiol-activated cytolysin CAB88_16455 PF17440 Thiol-activated cytolysin beta sandwich domain CAB88_16460 PF02667 Short chain fatty acid transporter CAB88_16470 PF02525 Flavodoxin-like fold CAB88_16490 PF14256 YwiC-like protein CAB88_16500 PF00005 ABC transporter CAB88_16520 PF03737 Aldolase/RraA CAB88_16525 PF03606 C4-dicarboxylate anaerobic carrier CAB88_16530 PF04231 Endonuclease I CAB88_16540 PF01048 Phosphorylase superfamily CAB88_16550 PF01381 Helix-turn-helix CAB88_16565 PF04073 Aminoacyl-tRNA editing domain CAB88_16570 PF03129 Anticodon binding domain CAB88_16570 PF13393 Histidyl-tRNA synthetase CAB88_16585 PF01638 HxlR-like helix-turn-helix CAB88_16590 PF00881 Nitroreductase family CAB88_16600 PF02887 Pyruvate kinase, alpha/beta domain CAB88_16600 PF00391 PEP-utilising enzyme, mobile domain CAB88_16600 PF00224 Pyruvate kinase, barrel domain CAB88_16635 PF00005 ABC transporter CAB88_16670 PF13419 Haloacid dehalogenase-like hydrolase CAB88_16695 PF00293 NUDIX domain CAB88_16695 PF13344 Haloacid dehalogenase-like hydrolase CAB88_16705 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CAB88_16710 PF00480 ROK family CAB88_16720 PF12464 Maltose acetyltransferase CAB88_16720 PF14602 Hexapeptide repeat of succinyl-transferase CAB88_16725 PF00579 tRNA synthetases class I (W and Y) CAB88_16730 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain CAB88_16730 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase CAB88_16730 PF13288 DXP reductoisomerase C-terminal domain CAB88_16735 PF01594 AI-2E family transporter CAB88_16760 PF08003 Protein of unknown function (DUF1698) CAB88_16770 PF07690 Major Facilitator Superfamily CAB88_16785 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) CAB88_16795 PF03471 Transporter associated domain CAB88_16795 PF00571 CBS domain CAB88_16795 PF01595 Cyclin M transmembrane N-terminal domain CAB88_16800 PF13411 MerR HTH family regulatory protein CAB88_16810 PF00483 Nucleotidyl transferase CAB88_16815 PF16363 GDP-mannose 4,6 dehydratase CAB88_16820 PF08421 Putative zinc binding domain CAB88_16820 PF08484 C-methyltransferase C-terminal domain CAB88_16835 PF00892 EamA-like transporter family CAB88_16845 PF00805 Pentapeptide repeats (8 copies) CAB88_16850 PF06906 Protein of unknown function (DUF1272) CAB88_16855 PF10282 Lactonase, 7-bladed beta-propeller CAB88_16860 PF02782 FGGY family of carbohydrate kinases, C-terminal domain CAB88_16860 PF00370 FGGY family of carbohydrate kinases, N-terminal domain CAB88_16865 PF02447 GntP family permease CAB88_16870 PF00923 Transaldolase/Fructose-6-phosphate aldolase CAB88_16875 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain CAB88_16875 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase CAB88_16880 PF02779 Transketolase, pyrimidine binding domain CAB88_16880 PF02780 Transketolase, C-terminal domain CAB88_16880 PF00456 Transketolase, thiamine diphosphate binding domain CAB88_16885 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain CAB88_16885 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain CAB88_16890 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain CAB88_16890 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain CAB88_16895 PF08240 Alcohol dehydrogenase GroES-like domain CAB88_16895 PF00107 Zinc-binding dehydrogenase CAB88_16900 PF00296 Luciferase-like monooxygenase CAB88_16905 PF00550 Phosphopantetheine attachment site CAB88_16905 PF08659 KR domain CAB88_16905 PF02801 Beta-ketoacyl synthase, C-terminal domain CAB88_16905 PF14765 Polyketide synthase dehydratase CAB88_16905 PF16197 Ketoacyl-synthetase C-terminal extension CAB88_16905 PF00107 Zinc-binding dehydrogenase CAB88_16905 PF08240 Alcohol dehydrogenase GroES-like domain CAB88_16905 PF00698 Acyl transferase domain CAB88_16905 PF00109 Beta-ketoacyl synthase, N-terminal domain CAB88_16915 PF00106 short chain dehydrogenase CAB88_16920 PF02868 Thermolysin metallopeptidase, alpha-helical domain CAB88_16920 PF01447 Thermolysin metallopeptidase, catalytic domain CAB88_16920 PF03413 Peptidase propeptide and YPEB domain CAB88_16920 PF07504 Fungalysin/Thermolysin Propeptide Motif CAB88_16930 PF00672 HAMP domain CAB88_16930 PF12729 Four helix bundle sensory module for signal transduction CAB88_16930 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CAB88_16935 PF06941 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C) CAB88_16945 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase CAB88_16945 PF00925 GTP cyclohydrolase II CAB88_16950 PF01638 HxlR-like helix-turn-helix CAB88_16965 PF00248 Aldo/keto reductase family CAB88_16970 PF07690 Major Facilitator Superfamily CAB88_16980 PF03928 Haem-degrading CAB88_17000 PF03831 PhnA domain CAB88_17000 PF08274 PhnA Zinc-Ribbon CAB88_17005 PF00916 Sulfate permease family CAB88_17005 PF01740 STAS domain CAB88_17050 PF03960 ArsC family CAB88_17060 PF01638 HxlR-like helix-turn-helix CAB88_17065 PF00392 Bacterial regulatory proteins, gntR family CAB88_17065 PF07702 UTRA domain CAB88_17075 PF01408 Oxidoreductase family, NAD-binding Rossmann fold CAB88_17075 PF02894 Oxidoreductase family, C-terminal alpha/beta domain CAB88_17085 PF01638 HxlR-like helix-turn-helix CAB88_17090 PF01638 HxlR-like helix-turn-helix CAB88_17095 PF00248 Aldo/keto reductase family CAB88_17140 PF02567 Phenazine biosynthesis-like protein CAB88_17160 PF13193 AMP-binding enzyme C-terminal domain CAB88_17160 PF00501 AMP-binding enzyme CAB88_17165 PF02525 Flavodoxin-like fold CAB88_17170 PF01638 HxlR-like helix-turn-helix CAB88_17180 PF01022 Bacterial regulatory protein, arsR family CAB88_17185 PF18627 Peptidoglycan GlcNAc deacetylase N-terminal domain CAB88_17185 PF01522 Polysaccharide deacetylase CAB88_17190 PF12791 Anti-sigma factor N-terminus CAB88_17195 PF04542 Sigma-70 region 2 CAB88_17200 PF00535 Glycosyl transferase family 2 CAB88_17200 PF18674 TarS beta-glycosyltransferase C-terminal domain 1 CAB88_17205 PF01810 LysE type translocator CAB88_17240 PF01061 ABC-2 type transporter CAB88_17245 PF00005 ABC transporter CAB88_17245 PF13732 Domain of unknown function (DUF4162) CAB88_17260 PF03063 Prismane/CO dehydrogenase family CAB88_17270 PF00753 Metallo-beta-lactamase superfamily CAB88_17275 PF01471 Putative peptidoglycan binding domain CAB88_17275 PF01183 Glycosyl hydrolases family 25 CAB88_17300 PF00144 Beta-lactamase CAB88_17340 PF00753 Metallo-beta-lactamase superfamily CAB88_17350 PF00324 Amino acid permease CAB88_17355 PF07690 Major Facilitator Superfamily CAB88_17385 PF02585 GlcNAc-PI de-N-acetylase CAB88_17390 PF08830 Protein of unknown function (DUF1806) CAB88_17395 PF03600 Citrate transporter CAB88_17410 PF01497 Periplasmic binding protein CAB88_17415 PF01032 FecCD transport family CAB88_17420 PF01032 FecCD transport family CAB88_17425 PF05675 Protein of unknown function (DUF817) CAB88_17430 PF13170 Protein of unknown function (DUF4003) CAB88_17445 PF10901 Protein of unknown function (DUF2690) CAB88_17460 PF03466 LysR substrate binding domain CAB88_17460 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CAB88_17465 PF00107 Zinc-binding dehydrogenase CAB88_17465 PF08240 Alcohol dehydrogenase GroES-like domain CAB88_17490 PF00128 Alpha amylase, catalytic domain CAB88_17490 PF09154 Domain of unknown function (DUF1939) CAB88_17495 PF00797 N-acetyltransferase CAB88_17505 PF04371 Porphyromonas-type peptidyl-arginine deiminase CAB88_17520 PF01062 Bestrophin, RFP-TM, chloride channel CAB88_17525 PF06146 Phosphate-starvation-inducible E CAB88_17530 PF04371 Porphyromonas-type peptidyl-arginine deiminase CAB88_17535 PF00144 Beta-lactamase CAB88_17550 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CAB88_17550 PF03466 LysR substrate binding domain CAB88_17560 PF03009 Glycerophosphoryl diester phosphodiesterase family CAB88_17565 PF01494 FAD binding domain CAB88_17570 PF01022 Bacterial regulatory protein, arsR family CAB88_17575 PF00107 Zinc-binding dehydrogenase CAB88_17575 PF08240 Alcohol dehydrogenase GroES-like domain CAB88_17580 PF02696 Uncharacterized ACR, YdiU/UPF0061 family CAB88_17585 PF18801 response regulator aspartate phosphatase H, N terminal CAB88_17595 PF04299 Putative FMN-binding domain CAB88_17615 PF01565 FAD binding domain CAB88_17615 PF02913 FAD linked oxidases, C-terminal domain CAB88_17645 PF00388 Phosphatidylinositol-specific phospholipase C, X domain CAB88_17650 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading CAB88_17650 PF18416 N-acetylglucosamine binding protein domain 2 CAB88_17665 PF03323 Bacillus/Clostridium GerA spore germination protein CAB88_17690 PF00553 Cellulose binding domain CAB88_17690 PF00041 Fibronectin type III domain CAB88_17690 PF00704 Glycosyl hydrolases family 18 CAB88_17705 PF03707 Bacterial signalling protein N terminal repeat CAB88_17705 PF00563 EAL domain CAB88_17705 PF00990 Diguanylate cyclase, GGDEF domain CAB88_17715 PF00440 Bacterial regulatory proteins, tetR family CAB88_17720 PF07968 Leukocidin/Hemolysin toxin family CAB88_17725 PF00395 S-layer homology domain CAB88_17725 PF01520 N-acetylmuramoyl-L-alanine amidase CAB88_17730 PF02557 D-alanyl-D-alanine carboxypeptidase CAB88_17755 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CAB88_17755 PF00512 His Kinase A (phospho-acceptor) domain CAB88_17755 PF00989 PAS fold CAB88_17760 PF18496 Collagenase G catalytic helper subdomain CAB88_17760 PF01752 Collagenase CAB88_17760 PF08453 Peptidase family M9 N-terminal CAB88_17765 PF02308 MgtC family CAB88_17780 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CAB88_17785 PF00497 Bacterial extracellular solute-binding proteins, family 3 CAB88_17790 PF00005 ABC transporter CAB88_17795 PF00528 Binding-protein-dependent transport system inner membrane component CAB88_17800 PF04294 VanW like protein CAB88_17810 PF13037 Domain of unknown function (DUF3898) CAB88_17810 PF13039 Protein of unknown function (DUF3900) CAB88_17830 PF00313 'Cold-shock' DNA-binding domain CAB88_17840 PF00258 Flavodoxin CAB88_17850 PF00293 NUDIX domain CAB88_17860 PF00132 Bacterial transferase hexapeptide (six repeats) CAB88_17870 PF00106 short chain dehydrogenase CAB88_17880 PF00206 Lyase CAB88_17880 PF14698 Argininosuccinate lyase C-terminal CAB88_17890 PF01156 Inosine-uridine preferring nucleoside hydrolase CAB88_17895 PF00474 Sodium:solute symporter family CAB88_17905 PF00171 Aldehyde dehydrogenase family CAB88_17920 PF13249 Squalene-hopene cyclase N-terminal domain CAB88_17920 PF13243 Squalene-hopene cyclase C-terminal domain CAB88_17925 PF02681 Divergent PAP2 family CAB88_17930 PF00892 EamA-like transporter family CAB88_17935 PF06961 Protein of unknown function (DUF1294) CAB88_17950 PF10609 NUBPL iron-transfer P-loop NTPase CAB88_17960 PF02391 MoaE protein CAB88_17965 PF03453 MoeA N-terminal region (domain I and II) CAB88_17965 PF03454 MoeA C-terminal region (domain IV) CAB88_17965 PF00994 Probable molybdopterin binding domain CAB88_17970 PF00899 ThiF family CAB88_17975 PF01226 Formate/nitrite transporter CAB88_17985 PF04055 Radical SAM superfamily CAB88_17985 PF06463 Molybdenum Cofactor Synthesis C CAB88_17990 PF02634 FdhD/NarQ family CAB88_17995 PF10057 Uncharacterized conserved protein (DUF2294) CAB88_18000 PF07849 Protein of unknown function (DUF1641) CAB88_18005 PF00037 4Fe-4S binding domain CAB88_18005 PF04879 Molybdopterin oxidoreductase Fe4S4 domain CAB88_18005 PF00384 Molybdopterin oxidoreductase CAB88_18005 PF01568 Molydopterin dinucleotide binding domain CAB88_18005 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region CAB88_18015 PF03323 Bacillus/Clostridium GerA spore germination protein CAB88_18030 PF13520 Amino acid permease CAB88_18065 PF08241 Methyltransferase domain CAB88_18070 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CAB88_18080 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CAB88_18085 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CAB88_18090 PF03816 Cell envelope-related transcriptional attenuator domain CAB88_18100 PF08281 Sigma-70, region 4 CAB88_18100 PF04542 Sigma-70 region 2 CAB88_18110 PF13732 Domain of unknown function (DUF4162) CAB88_18110 PF00005 ABC transporter CAB88_18130 PF02894 Oxidoreductase family, C-terminal alpha/beta domain CAB88_18130 PF01408 Oxidoreductase family, NAD-binding Rossmann fold CAB88_18135 PF03989 DNA gyrase C-terminal domain, beta-propeller CAB88_18135 PF00521 DNA gyrase/topoisomerase IV, subunit A CAB88_18140 PF00204 DNA gyrase B CAB88_18140 PF00986 DNA gyrase B subunit, carboxyl terminus CAB88_18140 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CAB88_18140 PF01751 Toprim domain CAB88_18150 PF13380 CoA binding domain CAB88_18155 PF13180 PDZ domain CAB88_18160 PF00072 Response regulator receiver domain CAB88_18160 PF00486 Transcriptional regulatory protein, C terminal CAB88_18165 PF04055 Radical SAM superfamily CAB88_18170 PF03477 ATP cone domain CAB88_18170 PF13597 Anaerobic ribonucleoside-triphosphate reductase CAB88_18175 PF02660 Glycerol-3-phosphate acyltransferase CAB88_18180 PF01521 Iron-sulphur cluster biosynthesis CAB88_18185 PF03061 Thioesterase superfamily CAB88_18190 PF00704 Glycosyl hydrolases family 18 CAB88_18190 PF01476 LysM domain CAB88_18195 PF08177 Small acid-soluble spore protein N family CAB88_18200 PF13040 Fur-regulated basic protein B CAB88_18210 PF07733 Bacterial DNA polymerase III alpha NTPase domain CAB88_18210 PF17657 Bacterial DNA polymerase III alpha subunit finger domain CAB88_18210 PF11490 DNA polymerase III polC-type N-terminus II CAB88_18210 PF14579 Helix-hairpin-helix motif CAB88_18210 PF02811 PHP domain CAB88_18210 PF00929 Exonuclease CAB88_18210 PF01336 OB-fold nucleic acid binding domain CAB88_18215 PF00578 AhpC/TSA family CAB88_18225 PF00664 ABC transporter transmembrane region CAB88_18225 PF03412 Peptidase C39 family CAB88_18225 PF00005 ABC transporter CAB88_18230 PF00694 Aconitase C-terminal domain CAB88_18230 PF00330 Aconitase family (aconitate hydratase) CAB88_18240 PF01522 Polysaccharide deacetylase CAB88_18250 PF08179 Small acid-soluble spore protein P family CAB88_18260 PF07690 Major Facilitator Superfamily CAB88_18270 PF02272 DHHA1 domain CAB88_18270 PF01411 tRNA synthetases class II (A) CAB88_18270 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain CAB88_18275 PF00293 NUDIX domain CAB88_18275 PF13344 Haloacid dehalogenase-like hydrolase CAB88_18285 PF00108 Thiolase, N-terminal domain CAB88_18285 PF02803 Thiolase, C-terminal domain CAB88_18290 PF00501 AMP-binding enzyme CAB88_18290 PF13193 AMP-binding enzyme C-terminal domain CAB88_18295 PF02632 BioY family CAB88_18300 PF00501 AMP-binding enzyme CAB88_18300 PF13193 AMP-binding enzyme C-terminal domain CAB88_18305 PF01381 Helix-turn-helix CAB88_18320 PF05532 CsbD-like CAB88_18340 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 CAB88_18340 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) CAB88_18355 PF00512 His Kinase A (phospho-acceptor) domain CAB88_18355 PF00989 PAS fold CAB88_18355 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CAB88_18355 PF13426 PAS domain CAB88_18355 PF13188 PAS domain CAB88_18360 PF01738 Dienelactone hydrolase family CAB88_18365 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CAB88_18370 PF00474 Sodium:solute symporter family CAB88_18375 PF01645 Conserved region in glutamate synthase CAB88_18380 PF00724 NADH:flavin oxidoreductase / NADH oxidase family CAB88_18385 PF02559 CarD-like/TRCF domain CAB88_18390 PF00491 Arginase family CAB88_18395 PF01979 Amidohydrolase family CAB88_18400 PF17391 Urocanase N-terminal domain CAB88_18400 PF17392 Urocanase C-terminal domain CAB88_18400 PF01175 Urocanase Rossmann-like domain CAB88_18405 PF00221 Aromatic amino acid lyase CAB88_18410 PF09021 HutP CAB88_18415 PF01209 ubiE/COQ5 methyltransferase family CAB88_18440 PF11084 Protein of unknown function (DUF2621) CAB88_18445 PF07301 Protein of unknown function (DUF1453) CAB88_18450 PF02683 Cytochrome C biogenesis protein transmembrane region CAB88_18475 PF00005 ABC transporter CAB88_18490 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CAB88_18490 PF03466 LysR substrate binding domain CAB88_18495 PF03788 LrgA family CAB88_18500 PF04172 LrgB-like family CAB88_18505 PF13344 Haloacid dehalogenase-like hydrolase CAB88_18505 PF00293 NUDIX domain CAB88_18515 PF01925 Sulfite exporter TauE/SafE CAB88_18535 PF08239 Bacterial SH3 domain CAB88_18535 PF01183 Glycosyl hydrolases family 25 CAB88_18540 PF00005 ABC transporter CAB88_18540 PF00664 ABC transporter transmembrane region CAB88_18545 PF00005 ABC transporter CAB88_18545 PF00664 ABC transporter transmembrane region CAB88_18550 PF03672 Uncharacterised protein family (UPF0154) CAB88_18555 PF10747 Sporulation inhibitor of replication protein SirA CAB88_18560 PF02779 Transketolase, pyrimidine binding domain CAB88_18560 PF00456 Transketolase, thiamine diphosphate binding domain CAB88_18560 PF02780 Transketolase, C-terminal domain CAB88_18565 PF00528 Binding-protein-dependent transport system inner membrane component CAB88_18570 PF00528 Binding-protein-dependent transport system inner membrane component CAB88_18575 PF00005 ABC transporter CAB88_18580 PF00497 Bacterial extracellular solute-binding proteins, family 3 CAB88_18585 PF02872 5'-nucleotidase, C-terminal domain CAB88_18585 PF00149 Calcineurin-like phosphoesterase CAB88_18590 PF01609 Transposase DDE domain CAB88_18600 PF05979 Bacterial protein of unknown function (DUF896) CAB88_18605 PF00239 Resolvase, N terminal domain CAB88_18610 PF01726 LexA DNA binding domain CAB88_18610 PF00717 Peptidase S24-like CAB88_18625 PF03551 Transcriptional regulator PadR-like family CAB88_18630 PF03951 Glutamine synthetase, beta-Grasp domain CAB88_18630 PF00120 Glutamine synthetase, catalytic domain CAB88_18635 PF13411 MerR HTH family regulatory protein CAB88_18640 PF06838 Methionine gamma-lyase CAB88_18645 PF16360 GTP-binding GTPase Middle Region CAB88_18645 PF13167 GTP-binding GTPase N-terminal CAB88_18645 PF01926 50S ribosome-binding GTPase CAB88_18650 PF03458 UPF0126 domain CAB88_18655 PF17866 AAA lid domain CAB88_18655 PF00004 ATPase family associated with various cellular activities (AAA) CAB88_18675 PF17209 Hfq protein CAB88_18690 PF06725 3D domain CAB88_18690 PF01476 LysM domain CAB88_18700 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CAB88_18700 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CAB88_18705 PF00294 pfkB family carbohydrate kinase CAB88_18710 PF08220 DeoR-like helix-turn-helix domain CAB88_18710 PF00455 DeoR C terminal sensor domain CAB88_18715 PF00465 Iron-containing alcohol dehydrogenase CAB88_18720 PF04238 Protein of unknown function (DUF420) CAB88_18735 PF00324 Amino acid permease CAB88_18745 PF00704 Glycosyl hydrolases family 18 CAB88_18745 PF00041 Fibronectin type III domain CAB88_18755 PF00149 Calcineurin-like phosphoesterase CAB88_18755 PF10518 TAT (twin-arginine translocation) pathway signal sequence CAB88_18760 PF01226 Formate/nitrite transporter CAB88_18765 PF00216 Bacterial DNA-binding protein CAB88_18775 PF00403 Heavy-metal-associated domain CAB88_18780 PF00403 Heavy-metal-associated domain CAB88_18785 PF02583 Metal-sensitive transcriptional repressor CAB88_18805 PF00756 Putative esterase CAB88_18810 PF00005 ABC transporter CAB88_18815 PF01032 FecCD transport family CAB88_18820 PF01032 FecCD transport family CAB88_18825 PF01497 Periplasmic binding protein CAB88_18830 PF03372 Endonuclease/Exonuclease/phosphatase family CAB88_18835 PF02805 Metal binding domain of Ada CAB88_18835 PF12833 Helix-turn-helix domain CAB88_18840 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain CAB88_18840 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain CAB88_18845 PF07934 8-oxoguanine DNA glycosylase, N-terminal domain CAB88_18845 PF00730 HhH-GPD superfamily base excision DNA repair protein CAB88_18850 PF01546 Peptidase family M20/M25/M40 CAB88_18850 PF07687 Peptidase dimerisation domain CAB88_18870 PF00561 alpha/beta hydrolase fold CAB88_18875 PF00563 EAL domain CAB88_18875 PF03707 Bacterial signalling protein N terminal repeat CAB88_18875 PF00990 Diguanylate cyclase, GGDEF domain CAB88_18880 PF03033 Glycosyltransferase family 28 N-terminal domain CAB88_18880 PF04101 Glycosyltransferase family 28 C-terminal domain CAB88_18890 PF16363 GDP-mannose 4,6 dehydratase CAB88_18895 PF02719 Polysaccharide biosynthesis protein CAB88_18895 PF08485 Polysaccharide biosynthesis protein C-terminal CAB88_18910 PF10787 Uncharacterised protein from bacillus cereus group CAB88_18915 PF04172 LrgB-like family CAB88_18920 PF03788 LrgA family CAB88_18925 PF00155 Aminotransferase class I and II CAB88_18925 PF00392 Bacterial regulatory proteins, gntR family CAB88_18935 PF00392 Bacterial regulatory proteins, gntR family CAB88_18935 PF07702 UTRA domain CAB88_18940 PF00232 Glycosyl hydrolase family 1 CAB88_18945 PF00388 Phosphatidylinositol-specific phospholipase C, X domain CAB88_18950 PF00082 Subtilase family CAB88_18955 PF07486 Cell Wall Hydrolase CAB88_18970 PF00884 Sulfatase CAB88_18975 PF00350 Dynamin family CAB88_18985 PF08676 MutL C terminal dimerisation domain CAB88_18985 PF01119 DNA mismatch repair protein, C-terminal domain CAB88_18990 PF01624 MutS domain I CAB88_18990 PF05188 MutS domain II CAB88_18990 PF05192 MutS domain III CAB88_18990 PF05190 MutS family domain IV CAB88_18990 PF00488 MutS domain V CAB88_18995 PF10628 Outer spore coat protein E (CotE) CAB88_19000 PF06133 Control of competence regulator ComK, YlbF/YmcA CAB88_19005 PF01938 TRAM domain CAB88_19005 PF04055 Radical SAM superfamily CAB88_19005 PF00919 Uncharacterized protein family UPF0004 CAB88_19010 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CAB88_19015 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II CAB88_19015 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase CAB88_19015 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg CAB88_19020 PF01244 Membrane dipeptidase (Peptidase family M19) CAB88_19025 PF04232 Stage V sporulation protein S (SpoVS) CAB88_19030 PF13277 YmdB-like protein CAB88_19035 PF12072 Domain of unknown function (DUF3552) CAB88_19035 PF00013 KH domain CAB88_19035 PF01966 HD domain CAB88_19045 PF00154 recA bacterial DNA recombination protein CAB88_19050 PF00994 Probable molybdopterin binding domain CAB88_19050 PF18146 Damage-inducible protein CinA KH domain CAB88_19050 PF02464 Competence-damaged protein CAB88_19055 PF01066 CDP-alcohol phosphatidyltransferase CAB88_19060 PF13464 Domain of unknown function (DUF4115) CAB88_19065 PF11868 Protein of unknown function (DUF3388) CAB88_19070 PF11588 Protein of unknown function (DUF3243) CAB88_19080 PF00675 Insulinase (Peptidase family M16) CAB88_19080 PF05193 Peptidase M16 inactive domain CAB88_19085 PF05193 Peptidase M16 inactive domain CAB88_19110 PF07702 UTRA domain CAB88_19110 PF00392 Bacterial regulatory proteins, gntR family CAB88_19120 PF17854 FtsK alpha domain CAB88_19120 PF09397 Ftsk gamma domain CAB88_19120 PF01580 FtsK/SpoIIIE family CAB88_19125 PF14035 YlzJ-like protein CAB88_19130 PF00574 Clp protease CAB88_19135 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain CAB88_19135 PF17770 Ribonuclease J C-terminal domain CAB88_19135 PF00753 Metallo-beta-lactamase superfamily CAB88_19140 PF00701 Dihydrodipicolinate synthetase family CAB88_19145 PF13840 ACT domain CAB88_19145 PF00696 Amino acid kinase family CAB88_19150 PF01118 Semialdehyde dehydrogenase, NAD binding domain CAB88_19150 PF02774 Semialdehyde dehydrogenase, dimerisation domain CAB88_19155 PF02441 Flavoprotein CAB88_19170 PF14431 YwqJ-like deaminase CAB88_19170 PF04740 LXG domain of WXG superfamily CAB88_19170 PF14449 Pre-toxin TG CAB88_19200 PF02371 Transposase IS116/IS110/IS902 family CAB88_19200 PF01548 Transposase CAB88_19320 PF00589 Phage integrase family CAB88_19335 PF10676 Spore germination protein gerPA/gerPF CAB88_19365 PF03796 DnaB-like helicase C terminal domain CAB88_19365 PF00772 DnaB-like helicase N terminal domain CAB88_19400 PF01381 Helix-turn-helix CAB88_19425 PF02441 Flavoprotein CAB88_19430 PF16924 Dipicolinate synthase subunit A N-terminal domain CAB88_19430 PF01262 Alanine dehydrogenase/PNT, C-terminal domain CAB88_19435 PF05239 PRC-barrel domain CAB88_19440 PF05193 Peptidase M16 inactive domain CAB88_19440 PF00675 Insulinase (Peptidase family M16) CAB88_19445 PF01522 Polysaccharide deacetylase CAB88_19450 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain CAB88_19450 PF03725 3' exoribonuclease family, domain 2 CAB88_19450 PF00013 KH domain CAB88_19450 PF00575 S1 RNA binding domain CAB88_19450 PF01138 3' exoribonuclease family, domain 1 CAB88_19455 PF00312 Ribosomal protein S15 CAB88_19460 PF01687 Riboflavin kinase CAB88_19460 PF06574 FAD synthetase CAB88_19465 PF16198 tRNA pseudouridylate synthase B C-terminal domain CAB88_19465 PF01509 TruB family pseudouridylate synthase (N terminal domain) CAB88_19470 PF02033 Ribosome-binding factor A CAB88_19475 PF04456 Protein of unknown function (DUF503) CAB88_19480 PF00009 Elongation factor Tu GTP binding domain CAB88_19480 PF11987 Translation-initiation factor 2 CAB88_19480 PF04760 Translation initiation factor IF-2, N-terminal region CAB88_19485 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family CAB88_19490 PF04296 Protein of unknown function (DUF448) CAB88_19495 PF08529 NusA N-terminal domain CAB88_19495 PF00575 S1 RNA binding domain CAB88_19495 PF13184 NusA-like KH domain CAB88_19500 PF02576 RimP N-terminal domain CAB88_19500 PF17384 RimP C-terminal SH3 domain CAB88_19505 PF17657 Bacterial DNA polymerase III alpha subunit finger domain CAB88_19505 PF07733 Bacterial DNA polymerase III alpha NTPase domain CAB88_19505 PF00929 Exonuclease CAB88_19505 PF14480 DNA polymerase III polC-type N-terminus I CAB88_19505 PF11490 DNA polymerase III polC-type N-terminus II CAB88_19505 PF14579 Helix-hairpin-helix motif CAB88_19505 PF02811 PHP domain CAB88_19510 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CAB88_19510 PF04073 Aminoacyl-tRNA editing domain CAB88_19510 PF03129 Anticodon binding domain CAB88_19515 PF02163 Peptidase family M50 CAB88_19515 PF17820 PDZ domain CAB88_19520 PF13288 DXP reductoisomerase C-terminal domain CAB88_19520 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase CAB88_19520 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain CAB88_19530 PF01255 Putative undecaprenyl diphosphate synthase CAB88_19535 PF01765 Ribosome recycling factor CAB88_19540 PF00696 Amino acid kinase family CAB88_19545 PF00889 Elongation factor TS CAB88_19550 PF00318 Ribosomal protein S2 CAB88_19555 PF06018 CodY GAF-like domain CAB88_19555 PF08222 CodY helix-turn-helix domain CAB88_19560 PF00004 ATPase family associated with various cellular activities (AAA) CAB88_19560 PF07724 AAA domain (Cdc48 subfamily) CAB88_19560 PF10431 C-terminal, D2-small domain, of ClpB protein CAB88_19565 PF00227 Proteasome subunit CAB88_19570 PF00589 Phage integrase family CAB88_19570 PF02899 Phage integrase, N-terminal SAM-like domain CAB88_19575 PF01134 Glucose inhibited division protein A CAB88_19580 PF01751 Toprim domain CAB88_19580 PF01396 Topoisomerase DNA binding C4 zinc finger CAB88_19580 PF01131 DNA topoisomerase CAB88_19585 PF02481 DNA recombination-mediator protein A CAB88_19590 PF00549 CoA-ligase CAB88_19590 PF02629 CoA binding domain CAB88_19595 PF00549 CoA-ligase CAB88_19595 PF08442 ATP-grasp domain CAB88_19600 PF01351 Ribonuclease HII CAB88_19605 PF01926 50S ribosome-binding GTPase CAB88_19610 PF10502 Signal peptidase, peptidase S26 CAB88_19615 PF01245 Ribosomal protein L19 CAB88_19620 PF01746 tRNA (Guanine-1)-methyltransferase CAB88_19625 PF01782 RimM N-terminal domain CAB88_19625 PF05239 PRC-barrel domain CAB88_19635 PF00886 Ribosomal protein S16 CAB88_19640 PF00448 SRP54-type protein, GTPase domain CAB88_19640 PF02978 Signal peptide binding domain CAB88_19640 PF02881 SRP54-type protein, helical bundle domain CAB88_19645 PF04297 Putative helix-turn-helix protein, YlxM / p13 like CAB88_19650 PF02881 SRP54-type protein, helical bundle domain CAB88_19650 PF00448 SRP54-type protein, GTPase domain CAB88_19655 PF02463 RecF/RecN/SMC N terminal domain CAB88_19655 PF06470 SMC proteins Flexible Hinge Domain CAB88_19660 PF00035 Double-stranded RNA binding motif CAB88_19660 PF14622 Ribonuclease-III-like CAB88_19665 PF00550 Phosphopantetheine attachment site CAB88_19675 PF00698 Acyl transferase domain CAB88_19680 PF02504 Fatty acid synthesis protein CAB88_19685 PF03061 Thioesterase superfamily CAB88_19690 PF00271 Helicase conserved C-terminal domain CAB88_19690 PF17191 RecG wedge domain CAB88_19690 PF00270 DEAD/DEAH box helicase CAB88_19695 PF13684 Dihydroxyacetone kinase family CAB88_19695 PF02734 DAK2 domain CAB88_19700 PF03780 Asp23 family, cell envelope-related function CAB88_19705 PF00830 Ribosomal L28 family CAB88_19710 PF08183 Stage V sporulation protein family CAB88_19715 PF04265 Thiamin pyrophosphokinase, vitamin B1 binding domain CAB88_19715 PF04263 Thiamin pyrophosphokinase, catalytic domain CAB88_19720 PF00834 Ribulose-phosphate 3 epimerase family CAB88_19725 PF16745 RsgA N-terminal domain CAB88_19725 PF03193 RsgA GTPase CAB88_19730 PF00069 Protein kinase domain CAB88_19730 PF03793 PASTA domain CAB88_19740 PF04055 Radical SAM superfamily CAB88_19745 PF01189 16S rRNA methyltransferase RsmB/F CAB88_19745 PF01029 NusB family CAB88_19750 PF00551 Formyl transferase CAB88_19750 PF02911 Formyl transferase, C-terminal domain CAB88_19755 PF01327 Polypeptide deformylase CAB88_19760 PF17764 3′ DNA-binding domain (3′BD) CAB88_19760 PF18319 PriA DNA helicase Cys-rich region (CRR) domain CAB88_19760 PF04851 Type III restriction enzyme, res subunit CAB88_19760 PF00271 Helicase conserved C-terminal domain CAB88_19760 PF18074 Primosomal protein N C-terminal domain CAB88_19765 PF04127 DNA / pantothenate metabolism flavoprotein CAB88_19765 PF02441 Flavoprotein CAB88_19770 PF01192 RNA polymerase Rpb6 CAB88_19775 PF00625 Guanylate kinase CAB88_19780 PF04025 Domain of unknown function (DUF370) CAB88_19785 PF08340 Domain of unknown function (DUF1732) CAB88_19785 PF03755 YicC-like family, N-terminal region CAB88_19790 PF00690 Cation transporter/ATPase, N-terminus CAB88_19790 PF00689 Cation transporting ATPase, C-terminus CAB88_19805 PF01321 Creatinase/Prolidase N-terminal domain CAB88_19805 PF00557 Metallopeptidase family M24 CAB88_19840 PF00156 Phosphoribosyl transferase domain CAB88_19845 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family CAB88_19850 PF01180 Dihydroorotate dehydrogenase CAB88_19855 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B CAB88_19860 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain CAB88_19860 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain CAB88_19860 PF02142 MGS-like domain CAB88_19865 PF00117 Glutamine amidotransferase class-I CAB88_19865 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain CAB88_19870 PF01979 Amidohydrolase family CAB88_19875 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain CAB88_19875 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain CAB88_19880 PF00860 Permease family CAB88_19885 PF00156 Phosphoribosyl transferase domain CAB88_19890 PF00849 RNA pseudouridylate synthase CAB88_19890 PF01479 S4 domain CAB88_19895 PF01252 Signal peptidase (SPase) II CAB88_19905 PF06827 Zinc finger found in FPG and IleRS CAB88_19905 PF00133 tRNA synthetases class I (I, L, M and V) CAB88_19905 PF08264 Anticodon-binding domain of tRNA CAB88_19910 PF05103 DivIVA protein CAB88_19915 PF17774 Putative RNA-binding domain in YlmH CAB88_19915 PF01479 S4 domain CAB88_19920 PF02325 YGGT family CAB88_19925 PF04472 Cell division protein SepF CAB88_19930 PF01168 Alanine racemase, N-terminal domain CAB88_19940 PF05239 PRC-barrel domain CAB88_19945 PF04542 Sigma-70 region 2 CAB88_19945 PF04539 Sigma-70 region 3 CAB88_19945 PF04545 Sigma-70, region 4 CAB88_19950 PF04545 Sigma-70, region 4 CAB88_19950 PF04542 Sigma-70 region 2 CAB88_19955 PF03419 Sporulation factor SpoIIGA CAB88_19960 PF00091 Tubulin/FtsZ family, GTPase domain CAB88_19960 PF12327 FtsZ family, C-terminal domain CAB88_19965 PF02491 SHS2 domain inserted in FTSA CAB88_19970 PF03799 Cell division protein FtsQ CAB88_19970 PF08478 POTRA domain, FtsQ-type CAB88_19975 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain CAB88_19975 PF01565 FAD binding domain CAB88_19980 PF04101 Glycosyltransferase family 28 C-terminal domain CAB88_19980 PF03033 Glycosyltransferase family 28 N-terminal domain CAB88_19985 PF01098 Cell cycle protein CAB88_19990 PF08245 Mur ligase middle domain CAB88_19990 PF02875 Mur ligase family, glutamate ligase domain CAB88_19995 PF00953 Glycosyl transferase family 4 CAB88_19995 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 CAB88_20000 PF01225 Mur ligase family, catalytic domain CAB88_20000 PF02875 Mur ligase family, glutamate ligase domain CAB88_20000 PF08245 Mur ligase middle domain CAB88_20005 PF03717 Penicillin-binding Protein dimerisation domain CAB88_20005 PF03793 PASTA domain CAB88_20005 PF00905 Penicillin binding protein transpeptidase domain CAB88_20015 PF04977 Septum formation initiator CAB88_20020 PF01795 MraW methylase family CAB88_20025 PF10079 Bacillithiol biosynthesis BshC CAB88_20030 PF02558 Ketopantoate reductase PanE/ApbA CAB88_20030 PF08546 Ketopantoate reductase PanE/ApbA C terminal CAB88_20035 PF00583 Acetyltransferase (GNAT) family CAB88_20045 PF01783 Ribosomal L32p protein family CAB88_20050 PF02620 Large ribosomal RNA subunit accumulation protein YceD CAB88_20055 PF05636 HIGH Nucleotidyl Transferase CAB88_20060 PF05362 Lon protease (S16) C-terminal proteolytic domain CAB88_20060 PF13180 PDZ domain CAB88_20065 PF01734 Patatin-like phospholipase CAB88_20070 PF07670 Nucleoside recognition CAB88_20075 PF01467 Cytidylyltransferase-like CAB88_20090 PF09902 Uncharacterized protein conserved in bacteria (DUF2129) CAB88_20095 PF06133 Control of competence regulator ComK, YlbF/YmcA CAB88_20100 PF00300 Histidine phosphatase superfamily (branch 1) CAB88_20105 PF14003 YlbE-like protein CAB88_20110 PF14071 Putative coat protein CAB88_20115 PF00188 Cysteine-rich secretory protein family CAB88_20115 PF14504 CAP-associated N-terminal CAB88_20120 PF08868 YugN-like family CAB88_20130 PF00795 Carbon-nitrogen hydrolase CAB88_20135 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) CAB88_20140 PF00795 Carbon-nitrogen hydrolase CAB88_20145 PF09678 Cytochrome c oxidase caa3 assembly factor (Caa3_CtaG) CAB88_20150 PF03626 Prokaryotic Cytochrome C oxidase subunit IV CAB88_20155 PF00510 Cytochrome c oxidase subunit III CAB88_20160 PF00115 Cytochrome C and Quinol oxidase polypeptide I CAB88_20165 PF00116 Cytochrome C oxidase subunit II, periplasmic domain CAB88_20165 PF00034 Cytochrome c CAB88_20165 PF02790 Cytochrome C oxidase subunit II, transmembrane domain CAB88_20170 PF01040 UbiA prenyltransferase family CAB88_20175 PF02628 Cytochrome oxidase assembly protein CAB88_20180 PF02436 Conserved carboxylase domain CAB88_20180 PF00682 HMGL-like CAB88_20180 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain CAB88_20180 PF00364 Biotin-requiring enzyme CAB88_20180 PF00289 Biotin carboxylase, N-terminal domain CAB88_20180 PF02785 Biotin carboxylase C-terminal domain CAB88_20190 PF01098 Cell cycle protein CAB88_20195 PF07408 Protein of unknown function (DUF1507) CAB88_20205 PF13638 PIN domain CAB88_20205 PF02562 PhoH-like protein CAB88_20215 PF09963 Uncharacterized protein conserved in bacteria (DUF2197) CAB88_20225 PF14036 YlaH-like protein CAB88_20240 PF00459 Inositol monophosphatase family CAB88_20250 PF06335 Protein of unknown function (DUF1054) CAB88_20255 PF05256 Uncharacterised protein family (UPF0223) CAB88_20260 PF01276 Orn/Lys/Arg decarboxylase, major domain CAB88_20260 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain CAB88_20300 PF07992 Pyridine nucleotide-disulphide oxidoreductase CAB88_20300 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CAB88_20305 PF00364 Biotin-requiring enzyme CAB88_20305 PF02817 e3 binding domain CAB88_20305 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) CAB88_20310 PF02779 Transketolase, pyrimidine binding domain CAB88_20310 PF02780 Transketolase, C-terminal domain CAB88_20315 PF00676 Dehydrogenase E1 component CAB88_20325 PF01327 Polypeptide deformylase CAB88_20345 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain CAB88_20345 PF17770 Ribonuclease J C-terminal domain CAB88_20345 PF00753 Metallo-beta-lactamase superfamily CAB88_20350 PF02254 TrkA-N domain CAB88_20350 PF02080 TrkA-C domain CAB88_20360 PF07687 Peptidase dimerisation domain CAB88_20360 PF01546 Peptidase family M20/M25/M40 CAB88_20365 PF00132 Bacterial transferase hexapeptide (six repeats) CAB88_20365 PF08503 Tetrahydrodipicolinate succinyltransferase N-terminal CAB88_20365 PF14602 Hexapeptide repeat of succinyl-transferase CAB88_20370 PF03466 LysR substrate binding domain CAB88_20370 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CAB88_20385 PF04308 Ribonuclease H-like CAB88_20395 PF08796 Protein of unknown function (DUF1797) CAB88_20410 PF00563 EAL domain CAB88_20410 PF10388 EAL-domain associated signalling protein domain CAB88_20420 PF10518 TAT (twin-arginine translocation) pathway signal sequence CAB88_20420 PF00149 Calcineurin-like phosphoesterase CAB88_20430 PF02503 Polyphosphate kinase middle domain CAB88_20430 PF13089 Polyphosphate kinase N-terminal domain CAB88_20430 PF17941 Polyphosphate kinase C-terminal domain 1 CAB88_20430 PF13090 Polyphosphate kinase C-terminal domain 2 CAB88_20435 PF02541 Ppx/GppA phosphatase family CAB88_20440 PF14177 YkyB-like protein CAB88_20465 PF07690 Major Facilitator Superfamily CAB88_20475 PF01717 Cobalamin-independent synthase, Catalytic domain CAB88_20475 PF08267 Cobalamin-independent synthase, N-terminal domain CAB88_20485 PF14040 Deoxyribonuclease NucA/NucB CAB88_20500 PF00512 His Kinase A (phospho-acceptor) domain CAB88_20500 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CAB88_20510 PF00155 Aminotransferase class I and II CAB88_20520 PF00528 Binding-protein-dependent transport system inner membrane component CAB88_20525 PF00528 Binding-protein-dependent transport system inner membrane component CAB88_20530 PF13416 Bacterial extracellular solute-binding protein CAB88_20535 PF02903 Alpha amylase, N-terminal ig-like domain CAB88_20535 PF16657 Maltogenic Amylase, C-terminal domain CAB88_20535 PF00128 Alpha amylase, catalytic domain CAB88_20540 PF00128 Alpha amylase, catalytic domain CAB88_20540 PF16657 Maltogenic Amylase, C-terminal domain CAB88_20545 PF03459 TOBE domain CAB88_20545 PF17912 MalK OB fold domain CAB88_20545 PF00005 ABC transporter CAB88_20585 PF02803 Thiolase, C-terminal domain CAB88_20585 PF00108 Thiolase, N-terminal domain CAB88_20620 PF03551 Transcriptional regulator PadR-like family CAB88_20640 PF01636 Phosphotransferase enzyme family CAB88_20645 PF00795 Carbon-nitrogen hydrolase CAB88_20650 PF00155 Aminotransferase class I and II CAB88_20655 PF02788 Ribulose bisphosphate carboxylase large chain, N-terminal domain CAB88_20655 PF00016 Ribulose bisphosphate carboxylase large chain, catalytic domain CAB88_20665 PF00596 Class II Aldolase and Adducin N-terminal domain CAB88_20670 PF03079 ARD/ARD' family CAB88_20685 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase CAB88_20685 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase CAB88_20690 PF00144 Beta-lactamase CAB88_20695 PF00990 Diguanylate cyclase, GGDEF domain CAB88_20700 PF00881 Nitroreductase family CAB88_20715 PF05524 PEP-utilising enzyme, N-terminal CAB88_20715 PF02896 PEP-utilising enzyme, TIM barrel domain CAB88_20715 PF00391 PEP-utilising enzyme, mobile domain CAB88_20720 PF00381 PTS HPr component phosphorylation site CAB88_20725 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 CAB88_20725 PF00367 phosphotransferase system, EIIB CAB88_20725 PF02378 Phosphotransferase system, EIIC CAB88_20730 PF00874 PRD domain CAB88_20730 PF03123 CAT RNA binding domain CAB88_20745 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase CAB88_20750 PF01979 Amidohydrolase family CAB88_20760 PF04079 Segregation and condensation complex subunit ScpB CAB88_20770 PF02616 Segregation and condensation protein ScpA CAB88_20780 PF03745 Domain of unknown function (DUF309) CAB88_20785 PF00583 Acetyltransferase (GNAT) family CAB88_20790 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD CAB88_20795 PF06207 Protein of unknown function (DUF1002) CAB88_20805 PF03323 Bacillus/Clostridium GerA spore germination protein CAB88_20810 PF14097 Stage V sporulation protein AE1 CAB88_20815 PF03862 SpoVAC/SpoVAEB sporulation membrane protein CAB88_20820 PF07451 Stage V sporulation protein AD (SpoVAD) CAB88_20825 PF03862 SpoVAC/SpoVAEB sporulation membrane protein CAB88_20830 PF13782 Stage V sporulation protein AB CAB88_20835 PF12164 Stage V sporulation protein AA CAB88_20845 PF00209 Sodium:neurotransmitter symporter family CAB88_20850 PF04542 Sigma-70 region 2 CAB88_20850 PF04545 Sigma-70, region 4 CAB88_20850 PF04539 Sigma-70 region 3 CAB88_20855 PF13581 Histidine kinase-like ATPase domain CAB88_20860 PF01740 STAS domain CAB88_20865 PF07943 Penicillin-binding protein 5, C-terminal domain CAB88_20865 PF00768 D-alanyl-D-alanine carboxypeptidase CAB88_20875 PF00392 Bacterial regulatory proteins, gntR family CAB88_20880 PF00005 ABC transporter CAB88_20900 PF01047 MarR family CAB88_20910 PF00860 Permease family CAB88_20915 PF01544 CorA-like Mg2+ transporter protein CAB88_20920 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain CAB88_20920 PF00591 Glycosyl transferase family, a/b domain CAB88_20920 PF02885 Glycosyl transferase family, helical bundle domain CAB88_20925 PF01048 Phosphorylase superfamily CAB88_20930 PF01676 Metalloenzyme superfamily CAB88_20935 PF13115 YtkA-like CAB88_20940 PF00589 Phage integrase family CAB88_20940 PF02899 Phage integrase, N-terminal SAM-like domain CAB88_20945 PF14004 Protein of unknown function (DUF4227) CAB88_20950 PF01475 Ferric uptake regulator family CAB88_20955 PF01944 Stage II sporulation protein M CAB88_20965 PF00293 NUDIX domain CAB88_20970 PF13072 Mother cell inhibitor of FtsZ CAB88_20975 PF00248 Aldo/keto reductase family CAB88_20980 PF00248 Aldo/keto reductase family CAB88_20985 PF13673 Acetyltransferase (GNAT) domain CAB88_20985 PF04229 GrpB protein CAB88_20995 PF00746 LPXTG cell wall anchor motif CAB88_20995 PF00149 Calcineurin-like phosphoesterase CAB88_20995 PF00565 Staphylococcal nuclease homologue CAB88_20995 PF02872 5'-nucleotidase, C-terminal domain CAB88_21005 PF12146 Serine aminopeptidase, S33 CAB88_21010 PF03553 Na+/H+ antiporter family CAB88_21010 PF13726 Na+-H+ antiporter family CAB88_21015 PF00356 Bacterial regulatory proteins, lacI family CAB88_21020 PF00583 Acetyltransferase (GNAT) family CAB88_21025 PF12146 Serine aminopeptidase, S33 CAB88_21030 PF10827 Protein of unknown function (DUF2552) CAB88_21040 PF01872 RibD C-terminal domain CAB88_21040 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region CAB88_21045 PF00677 Lumazine binding domain CAB88_21050 PF00925 GTP cyclohydrolase II CAB88_21050 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase CAB88_21055 PF00885 6,7-dimethyl-8-ribityllumazine synthase CAB88_21065 PF06968 Biotin and Thiamin Synthesis associated domain CAB88_21065 PF04055 Radical SAM superfamily CAB88_21070 PF13847 Methyltransferase domain CAB88_21075 PF12697 Alpha/beta hydrolase family CAB88_21075 PF08241 Methyltransferase domain CAB88_21080 PF00155 Aminotransferase class I and II CAB88_21090 PF00202 Aminotransferase class-III CAB88_21110 PF02872 5'-nucleotidase, C-terminal domain CAB88_21110 PF00149 Calcineurin-like phosphoesterase CAB88_21120 PF01037 Lrp/AsnC ligand binding domain CAB88_21120 PF13404 AsnC-type helix-turn-helix domain CAB88_21160 PF04740 LXG domain of WXG superfamily CAB88_21160 PF14431 YwqJ-like deaminase CAB88_21160 PF14449 Pre-toxin TG CAB88_21165 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain CAB88_21165 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain CAB88_21170 PF00202 Aminotransferase class-III CAB88_21175 PF00696 Amino acid kinase family CAB88_21180 PF01960 ArgJ family CAB88_21185 PF01118 Semialdehyde dehydrogenase, NAD binding domain CAB88_21185 PF02774 Semialdehyde dehydrogenase, dimerisation domain CAB88_21195 PF00106 short chain dehydrogenase CAB88_21200 PF00753 Metallo-beta-lactamase superfamily CAB88_21205 PF14748 Pyrroline-5-carboxylate reductase dimerisation CAB88_21205 PF03807 NADP oxidoreductase coenzyme F420-dependent CAB88_21210 PF03313 Serine dehydratase alpha chain CAB88_21215 PF01842 ACT domain CAB88_21215 PF03315 Serine dehydratase beta chain CAB88_21225 PF00753 Metallo-beta-lactamase superfamily CAB88_21225 PF12706 Beta-lactamase superfamily domain CAB88_21240 PF00689 Cation transporting ATPase, C-terminus CAB88_21240 PF00690 Cation transporter/ATPase, N-terminus CAB88_21245 PF02308 MgtC family CAB88_21250 PF11798 IMS family HHH motif CAB88_21250 PF11799 impB/mucB/samB family C-terminal domain CAB88_21250 PF00817 impB/mucB/samB family CAB88_21260 PF07687 Peptidase dimerisation domain CAB88_21260 PF01546 Peptidase family M20/M25/M40 CAB88_21265 PF13302 Acetyltransferase (GNAT) domain CAB88_21280 PF03734 L,D-transpeptidase catalytic domain CAB88_21285 PF11728 Putative aromatic acid exporter C-terminal domain CAB88_21285 PF06081 Aromatic acid exporter family member 1 CAB88_21290 PF00005 ABC transporter CAB88_21295 PF00528 Binding-protein-dependent transport system inner membrane component CAB88_21300 PF00497 Bacterial extracellular solute-binding proteins, family 3 CAB88_21305 PF06491 Disulphide isomerase CAB88_21310 PF11208 Protein of unknown function (DUF2992) CAB88_21315 PF09297 NADH pyrophosphatase zinc ribbon domain CAB88_21315 PF00293 NUDIX domain CAB88_21320 PF04239 Protein of unknown function (DUF421) CAB88_21325 PF01098 Cell cycle protein CAB88_21335 PF02817 e3 binding domain CAB88_21335 PF00364 Biotin-requiring enzyme CAB88_21335 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) CAB88_21340 PF02780 Transketolase, C-terminal domain CAB88_21340 PF02779 Transketolase, pyrimidine binding domain CAB88_21345 PF00676 Dehydrogenase E1 component CAB88_21350 PF07992 Pyridine nucleotide-disulphide oxidoreductase CAB88_21350 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CAB88_21355 PF00871 Acetokinase family CAB88_21360 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain CAB88_21360 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase CAB88_21365 PF01515 Phosphate acetyl/butaryl transferase CAB88_21375 PF00158 Sigma-54 interaction domain CAB88_21375 PF00989 PAS fold CAB88_21375 PF02954 Bacterial regulatory protein, Fis family CAB88_21385 PF03009 Glycerophosphoryl diester phosphodiesterase family CAB88_21390 PF14174 YycC-like protein CAB88_21400 PF00072 Response regulator receiver domain CAB88_21400 PF08769 Sporulation initiation factor Spo0A C terminal CAB88_21410 PF17820 PDZ domain CAB88_21410 PF05580 SpoIVB peptidase S55 CAB88_21415 PF13476 AAA domain CAB88_21420 PF01316 Arginine repressor, DNA binding domain CAB88_21420 PF02863 Arginine repressor, C-terminal domain CAB88_21425 PF01479 S4 domain CAB88_21425 PF01728 FtsJ-like methyltransferase CAB88_21430 PF02780 Transketolase, C-terminal domain CAB88_21430 PF02779 Transketolase, pyrimidine binding domain CAB88_21430 PF13292 1-deoxy-D-xylulose-5-phosphate synthase CAB88_21435 PF00348 Polyprenyl synthetase CAB88_21440 PF02609 Exonuclease VII small subunit CAB88_21445 PF02601 Exonuclease VII, large subunit CAB88_21445 PF13742 OB-fold nucleic acid binding domain CAB88_21450 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain CAB88_21450 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain CAB88_21455 PF01029 NusB family CAB88_21460 PF03780 Asp23 family, cell envelope-related function CAB88_21465 PF00289 Biotin carboxylase, N-terminal domain CAB88_21465 PF02785 Biotin carboxylase C-terminal domain CAB88_21465 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain CAB88_21470 PF00364 Biotin-requiring enzyme CAB88_21480 PF12685 SpoIIIAH-like protein CAB88_21490 PF09581 Stage III sporulation protein AF (Spore_III_AF) CAB88_21495 PF09546 Stage III sporulation protein AE (spore_III_AE) CAB88_21500 PF06686 Stage III sporulation protein AC/AD protein family CAB88_21505 PF06686 Stage III sporulation protein AC/AD protein family CAB88_21510 PF09548 Stage III sporulation protein AB (spore_III_AB) CAB88_21535 PF08207 Elongation factor P (EF-P) KOW-like domain CAB88_21535 PF09285 Elongation factor P, C-terminal CAB88_21535 PF01132 Elongation factor P (EF-P) OB domain CAB88_21540 PF01321 Creatinase/Prolidase N-terminal domain CAB88_21540 PF00557 Metallopeptidase family M24 CAB88_21545 PF01220 Dehydroquinase class II CAB88_21550 PF11085 Conserved membrane protein YqhR CAB88_21555 PF07136 Protein of unknown function (DUF1385) CAB88_21565 PF13419 Haloacid dehalogenase-like hydrolase CAB88_21570 PF01325 Iron dependent repressor, N-terminal DNA binding domain CAB88_21570 PF02742 Iron dependent repressor, metal binding and dimerisation domain CAB88_21595 PF03099 Biotin/lipoate A/B protein ligase family CAB88_21600 PF00581 Rhodanese-like domain CAB88_21610 PF00356 Bacterial regulatory proteins, lacI family CAB88_21610 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family CAB88_21620 PF00893 Small Multidrug Resistance protein CAB88_21625 PF00893 Small Multidrug Resistance protein CAB88_21660 PF00005 ABC transporter CAB88_21665 PF00392 Bacterial regulatory proteins, gntR family CAB88_21680 PF02347 Glycine cleavage system P-protein CAB88_21685 PF02347 Glycine cleavage system P-protein CAB88_21690 PF02347 Glycine cleavage system P-protein CAB88_21695 PF01571 Aminomethyltransferase folate-binding domain CAB88_21695 PF08669 Glycine cleavage T-protein C-terminal barrel domain CAB88_21700 PF00176 SNF2 family N-terminal domain CAB88_21700 PF00271 Helicase conserved C-terminal domain CAB88_21705 PF11079 Bacterial protein YqhG of unknown function CAB88_21730 PF14038 YqzE-like protein CAB88_21735 PF01202 Shikimate kinase CAB88_21770 PF00482 Type II secretion system (T2SS), protein F CAB88_21775 PF00437 Type II/IV secretion system protein CAB88_21785 PF11117 Protein of unknown function (DUF2626) CAB88_21790 PF00375 Sodium:dicarboxylate symporter family CAB88_21830 PF12323 Helix-turn-helix domain CAB88_21830 PF07282 Putative transposase DNA-binding domain CAB88_21830 PF01385 Probable transposase CAB88_21835 PF04101 Glycosyltransferase family 28 C-terminal domain CAB88_21835 PF03033 Glycosyltransferase family 28 N-terminal domain CAB88_21840 PF00809 Pterin binding enzyme CAB88_21840 PF02574 Homocysteine S-methyltransferase CAB88_21840 PF02607 B12 binding domain CAB88_21840 PF02965 Vitamin B12 dependent methionine synthase, activation domain CAB88_21840 PF02310 B12 binding domain CAB88_21845 PF02574 Homocysteine S-methyltransferase CAB88_21845 PF02219 Methylenetetrahydrofolate reductase CAB88_21850 PF01053 Cys/Met metabolism PLP-dependent enzyme CAB88_21855 PF01053 Cys/Met metabolism PLP-dependent enzyme CAB88_21865 PF01022 Bacterial regulatory protein, arsR family CAB88_21875 PF00753 Metallo-beta-lactamase superfamily CAB88_21880 PF10958 Protein of unknown function (DUF2759) CAB88_21885 PF00480 ROK family CAB88_21890 PF06014 Bacterial protein of unknown function (DUF910) CAB88_21895 PF01812 5-formyltetrahydrofolate cyclo-ligase family CAB88_21900 PF00471 Ribosomal protein L33 CAB88_21905 PF00483 Nucleotidyl transferase CAB88_21910 PF01895 PhoU domain CAB88_21915 PF00005 ABC transporter CAB88_21920 PF00528 Binding-protein-dependent transport system inner membrane component CAB88_21925 PF00528 Binding-protein-dependent transport system inner membrane component CAB88_21930 PF12849 PBP superfamily domain CAB88_21940 PF07690 Major Facilitator Superfamily CAB88_21945 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain CAB88_21945 PF02777 Iron/manganese superoxide dismutases, C-terminal domain CAB88_21955 PF06691 Protein of unknown function (DUF1189) CAB88_21965 PF04551 GcpE protein CAB88_21970 PF01475 Ferric uptake regulator family CAB88_21975 PF00950 ABC 3 transport family CAB88_21980 PF00005 ABC transporter CAB88_21985 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 CAB88_21985 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) CAB88_21990 PF11116 Protein of unknown function (DUF2624) CAB88_21995 PF01261 Xylose isomerase-like TIM barrel CAB88_22000 PF00270 DEAD/DEAH box helicase CAB88_22000 PF00271 Helicase conserved C-terminal domain CAB88_22010 PF02401 LytB protein CAB88_22015 PF01784 NIF3 (NGG1p interacting factor 3) CAB88_22020 PF04816 tRNA (adenine(22)-N(1))-methyltransferase CAB88_22025 PF13442 Cytochrome C oxidase, cbb3-type, subunit III CAB88_22030 PF04545 Sigma-70, region 4 CAB88_22030 PF04542 Sigma-70 region 2 CAB88_22030 PF04539 Sigma-70 region 3 CAB88_22030 PF03979 Sigma-70 factor, region 1.1 CAB88_22030 PF00140 Sigma-70 factor, region 1.2 CAB88_22035 PF01807 CHC2 zinc finger CAB88_22035 PF08275 DNA primase catalytic core, N-terminal domain CAB88_22035 PF10410 DnaB-helicase binding domain of primase CAB88_22050 PF03618 Kinase/pyrophosphorylase CAB88_22055 PF08279 HTH domain CAB88_22055 PF00571 CBS domain CAB88_22060 PF02565 Recombination protein O C terminal CAB88_22060 PF11967 Recombination protein O N terminal CAB88_22070 PF07650 KH domain CAB88_22070 PF01926 50S ribosome-binding GTPase CAB88_22075 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region CAB88_22080 PF01219 Prokaryotic diacylglycerol kinase CAB88_22085 PF02130 Uncharacterized protein family UPF0054 CAB88_22090 PF07697 7TM-HD extracellular CAB88_22090 PF07698 7TM receptor with intracellular HD hydrolase CAB88_22090 PF01966 HD domain CAB88_22095 PF02562 PhoH-like protein CAB88_22100 PF06898 Putative stage IV sporulation protein YqfD CAB88_22105 PF07873 YabP family CAB88_22115 PF09424 Yqey-like protein CAB88_22120 PF01165 Ribosomal protein S21 CAB88_22130 PF04055 Radical SAM superfamily CAB88_22130 PF01938 TRAM domain CAB88_22130 PF00919 Uncharacterized protein family UPF0004 CAB88_22135 PF04452 RNA methyltransferase CAB88_22145 PF01556 DnaJ C terminal domain CAB88_22145 PF00684 DnaJ central domain CAB88_22145 PF00226 DnaJ domain CAB88_22150 PF00012 Hsp70 protein CAB88_22155 PF01025 GrpE CAB88_22160 PF01628 HrcA protein C terminal domain CAB88_22165 PF06969 HemN C-terminal domain CAB88_22165 PF04055 Radical SAM superfamily CAB88_22170 PF01638 HxlR-like helix-turn-helix CAB88_22175 PF06421 GTP-binding protein LepA C-terminus CAB88_22175 PF03144 Elongation factor Tu domain 2 CAB88_22175 PF00009 Elongation factor Tu GTP binding domain CAB88_22175 PF00679 Elongation factor G C-terminus CAB88_22185 PF03418 Germination protease CAB88_22190 PF01649 Ribosomal protein S20 CAB88_22195 PF06144 DNA polymerase III, delta subunit CAB88_22200 PF14141 YqzM-like protein CAB88_22205 PF00753 Metallo-beta-lactamase superfamily CAB88_22205 PF13567 Domain of unknown function (DUF4131) CAB88_22205 PF03772 Competence protein CAB88_22210 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region CAB88_22215 PF10531 SLBB domain CAB88_22220 PF03807 NADP oxidoreductase coenzyme F420-dependent CAB88_22220 PF14748 Pyrroline-5-carboxylate reductase dimerisation CAB88_22225 PF13649 Methyltransferase domain CAB88_22235 PF01966 HD domain CAB88_22240 PF01467 Cytidylyltransferase-like CAB88_22245 PF01985 CRS1 / YhbY (CRM) domain CAB88_22250 PF18317 Shikimate 5'-dehydrogenase C-terminal domain CAB88_22250 PF08501 Shikimate dehydrogenase substrate binding domain CAB88_22250 PF01488 Shikimate / quinate 5-dehydrogenase CAB88_22255 PF01926 50S ribosome-binding GTPase CAB88_22270 PF02666 Phosphatidylserine decarboxylase CAB88_22275 PF04545 Sigma-70, region 4 CAB88_22275 PF04542 Sigma-70 region 2 CAB88_22285 PF16244 Domain of unknown function (DUF4901) CAB88_22290 PF00471 Ribosomal protein L33 CAB88_22295 PF00881 Nitroreductase family CAB88_22300 PF04607 Region found in RelA / SpoT proteins CAB88_22310 PF00245 Alkaline phosphatase CAB88_22315 PF00583 Acetyltransferase (GNAT) family CAB88_22320 PF08386 TAP-like protein CAB88_22320 PF00561 alpha/beta hydrolase fold CAB88_22355 PF00082 Subtilase family CAB88_22355 PF13860 FlgD Ig-like domain CAB88_22355 PF02225 PA domain CAB88_22355 PF05922 Peptidase inhibitor I9 CAB88_22360 PF00351 Biopterin-dependent aromatic amino acid hydroxylase CAB88_22370 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CAB88_22375 PF07681 DoxX CAB88_22410 PF00005 ABC transporter CAB88_22415 PF01032 FecCD transport family CAB88_22420 PF01497 Periplasmic binding protein CAB88_22430 PF14143 YrhC-like protein CAB88_22435 PF00465 Iron-containing alcohol dehydrogenase CAB88_22435 PF00171 Aldehyde dehydrogenase family CAB88_22440 PF01053 Cys/Met metabolism PLP-dependent enzyme CAB88_22445 PF00291 Pyridoxal-phosphate dependent enzyme CAB88_22450 PF01048 Phosphorylase superfamily CAB88_22455 PF08241 Methyltransferase domain CAB88_22470 PF00905 Penicillin binding protein transpeptidase domain CAB88_22470 PF03717 Penicillin-binding Protein dimerisation domain CAB88_22475 PF03449 Transcription elongation factor, N-terminal CAB88_22475 PF01272 Transcription elongation factor, GreA/GreB, C-term CAB88_22480 PF00485 Phosphoribulokinase / Uridine kinase family CAB88_22500 PF02618 YceG-like family CAB88_22505 PF06949 Protein of unknown function (DUF1292) CAB88_22510 PF03652 Holliday junction resolvase CAB88_22520 PF02272 DHHA1 domain CAB88_22520 PF01411 tRNA synthetases class II (A) CAB88_22520 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain CAB88_22530 PF01594 AI-2E family transporter CAB88_22550 PF14490 Helix-hairpin-helix containing domain CAB88_22550 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain CAB88_22550 PF13538 UvrD-like helicase C-terminal domain CAB88_22565 PF00266 Aminotransferase class-V CAB88_22570 PF02082 Transcriptional regulator CAB88_22575 PF12002 MgsA AAA+ ATPase C terminal CAB88_22575 PF16193 AAA C-terminal domain CAB88_22575 PF05496 Holliday junction DNA helicase RuvB P-loop domain CAB88_22595 PF00899 ThiF family CAB88_22600 PF02938 GAD domain CAB88_22600 PF00152 tRNA synthetases class II (D, K and N) CAB88_22600 PF01336 OB-fold nucleic acid binding domain CAB88_22605 PF13393 Histidyl-tRNA synthetase CAB88_22605 PF03129 Anticodon binding domain CAB88_22615 PF02580 D-Tyr-tRNA(Tyr) deacylase CAB88_22620 PF02824 TGS domain CAB88_22620 PF13291 ACT domain CAB88_22620 PF04607 Region found in RelA / SpoT proteins CAB88_22625 PF00156 Phosphoribosyl transferase domain CAB88_22630 PF17768 RecJ OB domain CAB88_22630 PF01368 DHH family CAB88_22630 PF10141 Single-strand DNA-specific exonuclease, C terminal domain CAB88_22630 PF02272 DHHA1 domain CAB88_22635 PF16916 Dimerisation domain of Zinc Transporter CAB88_22635 PF01545 Cation efflux family CAB88_22640 PF02355 Protein export membrane protein CAB88_22640 PF07549 SecD/SecF GG Motif CAB88_22645 PF13797 Post-transcriptional regulator CAB88_22650 PF01943 Polysaccharide biosynthesis protein CAB88_22650 PF14667 Polysaccharide biosynthesis C-terminal domain CAB88_22655 PF04239 Protein of unknown function (DUF421) CAB88_22665 PF02699 Preprotein translocase subunit CAB88_22670 PF01702 Queuine tRNA-ribosyltransferase CAB88_22675 PF02547 Queuosine biosynthesis protein CAB88_22680 PF11146 Protein of unknown function (DUF2905) CAB88_22685 PF17864 RuvB AAA lid domain CAB88_22685 PF05491 RuvB C-terminal winged helix domain CAB88_22685 PF05496 Holliday junction DNA helicase RuvB P-loop domain CAB88_22690 PF01330 RuvA N terminal domain CAB88_22690 PF07499 RuvA, C-terminal domain CAB88_22695 PF01497 Periplasmic binding protein CAB88_22715 PF01476 LysM domain CAB88_22720 PF02445 Quinolinate synthetase A protein CAB88_22725 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain CAB88_22725 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain CAB88_22730 PF00890 FAD binding domain CAB88_22730 PF02910 Fumarate reductase flavoprotein C-term CAB88_22735 PF00266 Aminotransferase class-V CAB88_22740 PF02829 3H domain CAB88_22740 PF08279 HTH domain CAB88_22745 PF03475 3-alpha domain CAB88_22745 PF03473 MOSC domain CAB88_22750 PF01842 ACT domain CAB88_22750 PF00800 Prephenate dehydratase CAB88_22755 PF02687 FtsX-like permease family CAB88_22760 PF02687 FtsX-like permease family CAB88_22765 PF00005 ABC transporter CAB88_22770 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CAB88_22775 PF00072 Response regulator receiver domain CAB88_22775 PF00486 Transcriptional regulatory protein, C terminal CAB88_22780 PF01018 GTP1/OBG CAB88_22780 PF09269 Domain of unknown function (DUF1967) CAB88_22780 PF01926 50S ribosome-binding GTPase CAB88_22785 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain CAB88_22785 PF14682 Sporulation initiation phospho-transferase B, C-terminal CAB88_22790 PF01016 Ribosomal L27 protein CAB88_22795 PF04327 Cysteine protease Prp CAB88_22800 PF00829 Ribosomal prokaryotic L21 protein CAB88_22805 PF00575 S1 RNA binding domain CAB88_22805 PF10150 Ribonuclease E/G family CAB88_22810 PF02163 Peptidase family M50 CAB88_22815 PF01551 Peptidase family M23 CAB88_22820 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain CAB88_22825 PF03775 Septum formation inhibitor MinC, C-terminal domain CAB88_22835 PF04085 rod shape-determining protein MreC CAB88_22845 PF04002 RadC-like JAB domain CAB88_22850 PF02545 Maf-like protein CAB88_22865 PF02875 Mur ligase family, glutamate ligase domain CAB88_22865 PF08245 Mur ligase middle domain CAB88_22870 PF08264 Anticodon-binding domain of tRNA CAB88_22870 PF00133 tRNA synthetases class I (I, L, M and V) CAB88_22870 PF10458 Valyl tRNA synthetase tRNA binding arm CAB88_22880 PF01476 LysM domain CAB88_22885 PF00202 Aminotransferase class-III CAB88_22890 PF00490 Delta-aminolevulinic acid dehydratase CAB88_22895 PF02602 Uroporphyrinogen-III synthase HemD CAB88_22900 PF03900 Porphobilinogen deaminase, C-terminal domain CAB88_22900 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain CAB88_22905 PF01578 Cytochrome C assembly protein CAB88_22910 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain CAB88_22910 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain CAB88_22910 PF01488 Shikimate / quinate 5-dehydrogenase CAB88_22915 PF01047 MarR family CAB88_22920 PF02566 OsmC-like protein CAB88_22925 PF01926 50S ribosome-binding GTPase CAB88_22930 PF02190 ATP-dependent protease La (LON) substrate-binding domain CAB88_22930 PF05362 Lon protease (S16) C-terminal proteolytic domain CAB88_22930 PF00004 ATPase family associated with various cellular activities (AAA) CAB88_22935 PF05362 Lon protease (S16) C-terminal proteolytic domain CAB88_22935 PF00004 ATPase family associated with various cellular activities (AAA) CAB88_22940 PF10431 C-terminal, D2-small domain, of ClpB protein CAB88_22940 PF07724 AAA domain (Cdc48 subfamily) CAB88_22940 PF06689 ClpX C4-type zinc finger CAB88_22945 PF05697 Bacterial trigger factor protein (TF) CAB88_22945 PF05698 Bacterial trigger factor protein (TF) C-terminus CAB88_22945 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase CAB88_22965 PF11724 YvbH-like oligomerisation region CAB88_22965 PF08000 Bacterial PH domain CAB88_23025 PF00239 Resolvase, N terminal domain CAB88_23025 PF02796 Helix-turn-helix domain of resolvase CAB88_23035 PF07261 Replication initiation and membrane attachment CAB88_23060 PF02899 Phage integrase, N-terminal SAM-like domain CAB88_23060 PF00589 Phage integrase family CAB88_23080 PF12850 Calcineurin-like phosphoesterase superfamily domain CAB88_23085 PF01725 Ham1 family CAB88_23090 PF01138 3' exoribonuclease family, domain 1 CAB88_23090 PF03725 3' exoribonuclease family, domain 2 CAB88_23095 PF10646 Sporulation and spore germination CAB88_23100 PF01177 Asp/Glu/Hydantoin racemase CAB88_23105 PF07690 Major Facilitator Superfamily CAB88_23115 PF00440 Bacterial regulatory proteins, tetR family CAB88_23125 PF00196 Bacterial regulatory proteins, luxR family CAB88_23130 PF00860 Permease family CAB88_23135 PF07969 Amidohydrolase family CAB88_23140 PF04024 PspC domain CAB88_23145 PF07883 Cupin domain CAB88_23145 PF01381 Helix-turn-helix CAB88_23150 PF13536 Putative multidrug resistance efflux transporter CAB88_23155 PF00230 Major intrinsic protein CAB88_23160 PF02082 Transcriptional regulator CAB88_23170 PF00005 ABC transporter CAB88_23170 PF13732 Domain of unknown function (DUF4162) CAB88_23175 PF03767 HAD superfamily, subfamily IIIB (Acid phosphatase) CAB88_23180 PF00691 OmpA family CAB88_23180 PF13677 Membrane MotB of proton-channel complex MotA/MotB CAB88_23185 PF01618 MotA/TolQ/ExbB proton channel family CAB88_23195 PF02557 D-alanyl-D-alanine carboxypeptidase CAB88_23200 PF03061 Thioesterase superfamily CAB88_23205 PF13085 2Fe-2S iron-sulfur cluster binding domain CAB88_23205 PF13183 4Fe-4S dicluster domain CAB88_23210 PF00890 FAD binding domain CAB88_23210 PF02910 Fumarate reductase flavoprotein C-term CAB88_23215 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit CAB88_23220 PF10702 Protein of unknown function (DUF2507) CAB88_23225 PF08459 UvrC Helix-hairpin-helix N-terminal CAB88_23225 PF02151 UvrB/uvrC motif CAB88_23225 PF01541 GIY-YIG catalytic domain CAB88_23230 PF00085 Thioredoxin CAB88_23235 PF01012 Electron transfer flavoprotein domain CAB88_23235 PF00766 Electron transfer flavoprotein FAD-binding domain CAB88_23240 PF01012 Electron transfer flavoprotein domain CAB88_23245 PF00378 Enoyl-CoA hydratase/isomerase CAB88_23250 PF00440 Bacterial regulatory proteins, tetR family CAB88_23250 PF08359 YsiA-like protein, C-terminal region CAB88_23255 PF13193 AMP-binding enzyme C-terminal domain CAB88_23255 PF00501 AMP-binding enzyme CAB88_23270 PF01497 Periplasmic binding protein CAB88_23275 PF01032 FecCD transport family CAB88_23285 PF05163 DinB family CAB88_23315 PF00005 ABC transporter CAB88_23320 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CAB88_23320 PF00512 His Kinase A (phospho-acceptor) domain CAB88_23325 PF00072 Response regulator receiver domain CAB88_23325 PF00486 Transcriptional regulatory protein, C terminal CAB88_23335 PF09962 Uncharacterized conserved protein (DUF2196) CAB88_23340 PF10672 S-adenosylmethionine-dependent methyltransferase CAB88_23340 PF17785 PUA-like domain CAB88_23345 PF03992 Antibiotic biosynthesis monooxygenase CAB88_23350 PF04203 Sortase domain CAB88_23355 PF00005 ABC transporter CAB88_23360 PF01032 FecCD transport family CAB88_23365 PF01497 Periplasmic binding protein CAB88_23370 PF05031 Iron Transport-associated domain CAB88_23380 PF05031 Iron Transport-associated domain CAB88_23385 PF05525 Branched-chain amino acid transport protein CAB88_23390 PF01479 S4 domain CAB88_23390 PF00849 RNA pseudouridylate synthase CAB88_23400 PF01713 Smr domain CAB88_23400 PF00488 MutS domain V CAB88_23405 PF02811 PHP domain CAB88_23405 PF14791 DNA polymerase beta thumb CAB88_23405 PF14716 Helix-hairpin-helix domain CAB88_23410 PF02674 Colicin V production protein CAB88_23415 PF05164 Cell division protein ZapA CAB88_23420 PF01351 Ribonuclease HII CAB88_23420 PF11858 Domain of unknown function (DUF3378) CAB88_23440 PF01336 OB-fold nucleic acid binding domain CAB88_23440 PF00152 tRNA synthetases class II (D, K and N) CAB88_23445 PF03483 B3/4 domain CAB88_23445 PF01588 Putative tRNA binding domain CAB88_23445 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain CAB88_23445 PF03147 Ferredoxin-fold anticodon binding domain CAB88_23445 PF03484 tRNA synthetase B5 domain CAB88_23450 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain CAB88_23450 PF01409 tRNA synthetases class II core domain (F) CAB88_23455 PF00588 SpoU rRNA Methylase family CAB88_23455 PF08032 RNA 2'-O ribose methyltransferase substrate binding CAB88_23460 PF14098 Small, acid-soluble spore protein I CAB88_23465 PF01966 HD domain CAB88_23485 PF07690 Major Facilitator Superfamily CAB88_23495 PF00440 Bacterial regulatory proteins, tetR family CAB88_23495 PF16859 Tetracyclin repressor-like, C-terminal domain CAB88_23500 PF05343 M42 glutamyl aminopeptidase CAB88_23510 PF00453 Ribosomal protein L20 CAB88_23515 PF01632 Ribosomal protein L35 CAB88_23520 PF00707 Translation initiation factor IF-3, C-terminal domain CAB88_23520 PF05198 Translation initiation factor IF-3, N-terminal domain CAB88_23525 PF03129 Anticodon binding domain CAB88_23525 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain CAB88_23525 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CAB88_23525 PF02824 TGS domain CAB88_23530 PF08812 YtxC-like family CAB88_23540 PF01695 IstB-like ATP binding protein CAB88_23540 PF07319 Primosomal protein DnaI N-terminus CAB88_23545 PF07261 Replication initiation and membrane attachment CAB88_23550 PF03477 ATP cone domain CAB88_23555 PF02675 S-adenosylmethionine decarboxylase CAB88_23565 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain CAB88_23565 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain CAB88_23570 PF01121 Dephospho-CoA kinase CAB88_23575 PF02659 Putative manganese efflux pump CAB88_23580 PF06827 Zinc finger found in FPG and IleRS CAB88_23580 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain CAB88_23580 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain CAB88_23585 PF00476 DNA polymerase family A CAB88_23585 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain CAB88_23585 PF01367 5'-3' exonuclease, C-terminal SAM fold CAB88_23590 PF16736 Single Cache-like CAB88_23590 PF00989 PAS fold CAB88_23590 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CAB88_23590 PF00512 His Kinase A (phospho-acceptor) domain CAB88_23595 PF00486 Transcriptional regulatory protein, C terminal CAB88_23595 PF00072 Response regulator receiver domain CAB88_23615 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain CAB88_23615 PF00056 lactate/malate dehydrogenase, NAD binding domain CAB88_23620 PF00180 Isocitrate/isopropylmalate dehydrogenase CAB88_23625 PF00285 Citrate synthase, C-terminal domain CAB88_23635 PF04284 Protein of unknown function (DUF441) CAB88_23640 PF01594 AI-2E family transporter CAB88_23645 PF04186 FxsA cytoplasmic membrane protein CAB88_23650 PF00224 Pyruvate kinase, barrel domain CAB88_23650 PF02887 Pyruvate kinase, alpha/beta domain CAB88_23650 PF00391 PEP-utilising enzyme, mobile domain CAB88_23655 PF00365 Phosphofructokinase CAB88_23660 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit CAB88_23665 PF17848 Acetyl-coA carboxylase zinc finger domain CAB88_23665 PF01039 Carboxyl transferase domain CAB88_23670 PF00392 Bacterial regulatory proteins, gntR family CAB88_23675 PF03949 Malic enzyme, NAD binding domain CAB88_23675 PF00390 Malic enzyme, N-terminal domain CAB88_23680 PF02811 PHP domain CAB88_23680 PF17657 Bacterial DNA polymerase III alpha subunit finger domain CAB88_23680 PF07733 Bacterial DNA polymerase III alpha NTPase domain CAB88_23680 PF01336 OB-fold nucleic acid binding domain CAB88_23680 PF14579 Helix-hairpin-helix motif CAB88_23685 PF14034 Sporulation protein YtrH CAB88_23695 PF02272 DHHA1 domain CAB88_23695 PF01368 DHH family CAB88_23700 PF14007 YtpI-like protein CAB88_23710 PF07085 DRTGG domain CAB88_23710 PF00392 Bacterial regulatory proteins, gntR family CAB88_23710 PF03061 Thioesterase superfamily CAB88_23710 PF00571 CBS domain CAB88_23725 PF00557 Metallopeptidase family M24 CAB88_23725 PF01321 Creatinase/Prolidase N-terminal domain CAB88_23760 PF12746 GNAT acetyltransferase CAB88_23765 PF07883 Cupin domain CAB88_23775 PF01262 Alanine dehydrogenase/PNT, C-terminal domain CAB88_23775 PF05222 Alanine dehydrogenase/PNT, N-terminal domain CAB88_23785 PF00582 Universal stress protein family CAB88_23805 PF14698 Argininosuccinate lyase C-terminal CAB88_23805 PF00206 Lyase CAB88_23810 PF00764 Arginosuccinate synthase CAB88_23830 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) CAB88_23830 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 CAB88_23835 PF12787 EcsC protein family CAB88_23850 PF00871 Acetokinase family CAB88_23855 PF02384 N-6 DNA Methylase CAB88_23860 PF08534 Redoxin CAB88_23865 PF09579 Sporulation protein YtfJ (Spore_YtfJ) CAB88_23875 PF01513 ATP-NAD kinase CAB88_23880 PF07969 Amidohydrolase family CAB88_23890 PF00501 AMP-binding enzyme CAB88_23890 PF13193 AMP-binding enzyme C-terminal domain CAB88_23895 PF00269 Small, acid-soluble spore proteins, alpha/beta type CAB88_23900 PF02568 Thiamine biosynthesis protein (ThiI) CAB88_23900 PF02926 THUMP domain CAB88_23905 PF00266 Aminotransferase class-V CAB88_23910 PF06160 Septation ring formation regulator, EzrA CAB88_23915 PF03466 LysR substrate binding domain CAB88_23915 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CAB88_23920 PF00892 EamA-like transporter family CAB88_23925 PF00440 Bacterial regulatory proteins, tetR family CAB88_23930 PF13185 GAF domain CAB88_23935 PF01053 Cys/Met metabolism PLP-dependent enzyme CAB88_23945 PF01479 S4 domain CAB88_23945 PF00163 Ribosomal protein S4/S9 N-terminal domain CAB88_23960 PF01479 S4 domain CAB88_23960 PF00579 tRNA synthetases class I (W and Y) CAB88_23970 PF08281 Sigma-70, region 4 CAB88_23970 PF04542 Sigma-70 region 2 CAB88_23980 PF14602 Hexapeptide repeat of succinyl-transferase CAB88_23980 PF12464 Maltose acetyltransferase CAB88_23985 PF13193 AMP-binding enzyme C-terminal domain CAB88_23985 PF00501 AMP-binding enzyme CAB88_23990 PF00583 Acetyltransferase (GNAT) family CAB88_23995 PF00571 CBS domain CAB88_24000 PF00850 Histone deacetylase domain CAB88_24005 PF00561 alpha/beta hydrolase fold CAB88_24015 PF00486 Transcriptional regulatory protein, C terminal CAB88_24015 PF00072 Response regulator receiver domain CAB88_24020 PF00512 His Kinase A (phospho-acceptor) domain CAB88_24020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CAB88_24020 PF00989 PAS fold CAB88_24020 PF16736 Single Cache-like CAB88_24025 PF12796 Ankyrin repeats (3 copies) CAB88_24030 PF01408 Oxidoreductase family, NAD-binding Rossmann fold CAB88_24035 PF01741 Large-conductance mechanosensitive channel, MscL CAB88_24055 PF00356 Bacterial regulatory proteins, lacI family CAB88_24070 PF07537 CamS sex pheromone cAM373 precursor CAB88_24075 PF11009 Protein of unknown function (DUF2847) CAB88_24085 PF02073 Thermophilic metalloprotease (M29) CAB88_24105 PF13302 Acetyltransferase (GNAT) domain CAB88_24110 PF00892 EamA-like transporter family CAB88_24115 PF13411 MerR HTH family regulatory protein CAB88_24120 PF02875 Mur ligase family, glutamate ligase domain CAB88_24120 PF01225 Mur ligase family, catalytic domain CAB88_24120 PF08245 Mur ligase middle domain CAB88_24130 PF17854 FtsK alpha domain CAB88_24130 PF09397 Ftsk gamma domain CAB88_24130 PF01580 FtsK/SpoIIIE family CAB88_24135 PF08239 Bacterial SH3 domain CAB88_24135 PF01520 N-acetylmuramoyl-L-alanine amidase CAB88_24145 PF01588 Putative tRNA binding domain CAB88_24145 PF14794 Domain of unknown function (DUF4479) CAB88_24150 PF07285 Protein of unknown function (DUF1444) CAB88_24155 PF00085 Thioredoxin CAB88_24160 PF01931 Protein of unknown function DUF84 CAB88_24165 PF05343 M42 glutamyl aminopeptidase CAB88_24175 PF00753 Metallo-beta-lactamase superfamily CAB88_24180 PF02390 Putative methyltransferase CAB88_24185 PF14165 YtzH-like protein CAB88_24190 PF01636 Phosphotransferase enzyme family CAB88_24195 PF00128 Alpha amylase, catalytic domain CAB88_24195 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) CAB88_24195 PF17999 Pullulanase N1-terminal domain CAB88_24200 PF02834 LigT like Phosphoesterase CAB88_24205 PF01546 Peptidase family M20/M25/M40 CAB88_24210 PF08220 DeoR-like helix-turn-helix domain CAB88_24215 PF00849 RNA pseudouridylate synthase CAB88_24215 PF01479 S4 domain CAB88_24220 PF14667 Polysaccharide biosynthesis C-terminal domain CAB88_24220 PF01943 Polysaccharide biosynthesis protein CAB88_24235 PF07690 Major Facilitator Superfamily CAB88_24240 PF01022 Bacterial regulatory protein, arsR family CAB88_24245 PF08327 Activator of Hsp90 ATPase homolog 1-like protein CAB88_24260 PF10957 Sporulation protein Cse60 CAB88_24270 PF02559 CarD-like/TRCF domain CAB88_24280 PF06800 Sugar transport protein CAB88_24295 PF02391 MoaE protein CAB88_24300 PF03205 Molybdopterin guanine dinucleotide synthesis protein B CAB88_24305 PF03453 MoeA N-terminal region (domain I and II) CAB88_24305 PF00994 Probable molybdopterin binding domain CAB88_24305 PF03454 MoeA C-terminal region (domain IV) CAB88_24310 PF01967 MoaC family CAB88_24315 PF00899 ThiF family CAB88_24320 PF04055 Radical SAM superfamily CAB88_24320 PF06463 Molybdenum Cofactor Synthesis C CAB88_24340 PF00581 Rhodanese-like domain CAB88_24350 PF00561 alpha/beta hydrolase fold CAB88_24355 PF03323 Bacillus/Clostridium GerA spore germination protein CAB88_24355 PF03323 Bacillus/Clostridium GerA spore germination protein CAB88_24360 PF03845 Spore germination protein CAB88_24385 PF09334 tRNA synthetases class I (M) CAB88_24385 PF00133 tRNA synthetases class I (I, L, M and V) CAB88_24385 PF08264 Anticodon-binding domain of tRNA CAB88_24385 PF13603 Leucyl-tRNA synthetase, Domain 2 CAB88_24390 PF07690 Major Facilitator Superfamily CAB88_24395 PF00999 Sodium/hydrogen exchanger family CAB88_24400 PF02080 TrkA-C domain CAB88_24405 PF00589 Phage integrase family CAB88_24420 PF00005 ABC transporter CAB88_24425 PF07786 Protein of unknown function (DUF1624) CAB88_24425 PF04235 Protein of unknown function (DUF418) CAB88_24430 PF01385 Probable transposase CAB88_24430 PF07282 Putative transposase DNA-binding domain CAB88_24430 PF12323 Helix-turn-helix domain CAB88_24445 PF10732 Protein of unknown function (DUF2524) CAB88_24450 PF04055 Radical SAM superfamily CAB88_24450 PF16199 Radical_SAM C-terminal domain CAB88_24455 PF06962 Putative rRNA methylase CAB88_24460 PF00005 ABC transporter CAB88_24460 PF13732 Domain of unknown function (DUF4162) CAB88_24470 PF01177 Asp/Glu/Hydantoin racemase CAB88_24490 PF10776 Protein of unknown function (DUF2600) CAB88_24495 PF12146 Serine aminopeptidase, S33 CAB88_24500 PF00132 Bacterial transferase hexapeptide (six repeats) CAB88_24505 PF01569 PAP2 superfamily CAB88_24510 PF00534 Glycosyl transferases group 1 CAB88_24510 PF13439 Glycosyltransferase Family 4 CAB88_24515 PF12804 MobA-like NTP transferase domain CAB88_24520 PF00994 Probable molybdopterin binding domain CAB88_24535 PF00438 S-adenosylmethionine synthetase, N-terminal domain CAB88_24535 PF02772 S-adenosylmethionine synthetase, central domain CAB88_24535 PF02773 S-adenosylmethionine synthetase, C-terminal domain CAB88_24545 PF01293 Phosphoenolpyruvate carboxykinase CAB88_24605 PF13188 PAS domain CAB88_24605 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CAB88_24605 PF00512 His Kinase A (phospho-acceptor) domain CAB88_24605 PF00989 PAS fold CAB88_24605 PF13426 PAS domain CAB88_24610 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CAB88_24610 PF02743 Cache domain CAB88_24610 PF00512 His Kinase A (phospho-acceptor) domain CAB88_24620 PF08386 TAP-like protein CAB88_24620 PF00561 alpha/beta hydrolase fold CAB88_24625 PF00884 Sulfatase CAB88_24655 PF00005 ABC transporter CAB88_24660 PF00528 Binding-protein-dependent transport system inner membrane component CAB88_24675 PF13419 Haloacid dehalogenase-like hydrolase CAB88_24685 PF00293 NUDIX domain CAB88_24720 PF00893 Small Multidrug Resistance protein CAB88_24725 PF00893 Small Multidrug Resistance protein CAB88_24730 PF00376 MerR family regulatory protein CAB88_24730 PF09278 MerR, DNA binding CAB88_24735 PF02664 S-Ribosylhomocysteinase (LuxS) CAB88_24740 PF01809 Putative membrane protein insertion efficiency factor CAB88_24745 PF00484 Carbonic anhydrase CAB88_24750 PF01654 Cytochrome bd terminal oxidase subunit I CAB88_24755 PF02322 Cytochrome bd terminal oxidase subunit II CAB88_24760 PF10676 Spore germination protein gerPA/gerPF CAB88_24770 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 CAB88_24770 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) CAB88_24790 PF04012 PspA/IM30 family CAB88_24805 PF07664 Ferrous iron transport protein B C terminus CAB88_24805 PF17910 FeoB cytosolic helical domain CAB88_24805 PF02421 Ferrous iron transport protein B CAB88_24805 PF07670 Nucleoside recognition CAB88_24815 PF09515 Thiamine transporter protein (Thia_YuaJ) CAB88_24820 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CAB88_24820 PF00672 HAMP domain CAB88_24820 PF00512 His Kinase A (phospho-acceptor) domain CAB88_24825 PF00486 Transcriptional regulatory protein, C terminal CAB88_24825 PF00072 Response regulator receiver domain CAB88_24855 PF00781 Diacylglycerol kinase catalytic domain CAB88_24865 PF02687 FtsX-like permease family CAB88_24870 PF00005 ABC transporter CAB88_24885 PF09335 SNARE associated Golgi protein CAB88_24890 PF00398 Ribosomal RNA adenine dimethylase CAB88_24895 PF02687 FtsX-like permease family CAB88_24900 PF00005 ABC transporter CAB88_24905 PF06445 GyrI-like small molecule binding domain CAB88_24905 PF12833 Helix-turn-helix domain CAB88_24915 PF13630 SdpI/YhfL protein family CAB88_24915 PF07853 Protein of unknown function (DUF1648) CAB88_24920 PF01022 Bacterial regulatory protein, arsR family CAB88_24925 PF00072 Response regulator receiver domain CAB88_24925 PF00486 Transcriptional regulatory protein, C terminal CAB88_24930 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CAB88_24935 PF02687 FtsX-like permease family CAB88_24940 PF02687 FtsX-like permease family CAB88_24945 PF00005 ABC transporter CAB88_24950 PF02687 FtsX-like permease family CAB88_24960 PF00440 Bacterial regulatory proteins, tetR family CAB88_24960 PF13977 BetI-type transcriptional repressor, C-terminal CAB88_24970 PF02447 GntP family permease CAB88_24985 PF07071 KDGP aldolase CAB88_24990 PF03841 L-seryl-tRNA selenium transferase CAB88_24995 PF01979 Amidohydrolase family CAB88_25000 PF02557 D-alanyl-D-alanine carboxypeptidase CAB88_25005 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CAB88_25005 PF00512 His Kinase A (phospho-acceptor) domain CAB88_25010 PF00072 Response regulator receiver domain CAB88_25010 PF00486 Transcriptional regulatory protein, C terminal CAB88_25020 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain CAB88_25020 PF13378 Enolase C-terminal domain-like CAB88_25025 PF13193 AMP-binding enzyme C-terminal domain CAB88_25025 PF00501 AMP-binding enzyme CAB88_25030 PF00378 Enoyl-CoA hydratase/isomerase CAB88_25035 PF00561 alpha/beta hydrolase fold CAB88_25040 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CAB88_25040 PF16582 Middle domain of thiamine pyrophosphate CAB88_25040 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CAB88_25045 PF00425 chorismate binding enzyme CAB88_25050 PF01040 UbiA prenyltransferase family CAB88_25055 PF01258 Prokaryotic dksA/traR C4-type zinc finger CAB88_25060 PF00313 'Cold-shock' DNA-binding domain CAB88_25090 PF00343 Carbohydrate phosphorylase CAB88_25095 PF08323 Starch synthase catalytic domain CAB88_25095 PF00534 Glycosyl transferases group 1 CAB88_25100 PF00483 Nucleotidyl transferase CAB88_25105 PF00483 Nucleotidyl transferase CAB88_25110 PF02806 Alpha amylase, C-terminal all-beta domain CAB88_25110 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) CAB88_25110 PF00128 Alpha amylase, catalytic domain CAB88_25120 PF05922 Peptidase inhibitor I9 CAB88_25120 PF00082 Subtilase family CAB88_25120 PF02225 PA domain CAB88_25120 PF13860 FlgD Ig-like domain CAB88_25135 PF00056 lactate/malate dehydrogenase, NAD binding domain CAB88_25135 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain CAB88_25270 PF02308 MgtC family CAB88_25275 PF07885 Ion channel CAB88_25275 PF02254 TrkA-N domain CAB88_25280 PF08868 YugN-like family CAB88_25285 PF00342 Phosphoglucose isomerase CAB88_25295 PF04070 Domain of unknown function (DUF378) CAB88_25300 PF00575 S1 RNA binding domain CAB88_25305 PF00155 Aminotransferase class I and II CAB88_25310 PF01037 Lrp/AsnC ligand binding domain CAB88_25315 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CAB88_25315 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CAB88_25320 PF08386 TAP-like protein CAB88_25320 PF00561 alpha/beta hydrolase fold CAB88_25330 PF00155 Aminotransferase class I and II CAB88_25345 PF08810 Kinase associated protein B CAB88_25350 PF00929 Exonuclease CAB88_25355 PF03600 Citrate transporter CAB88_25375 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CAB88_25375 PF03129 Anticodon binding domain CAB88_25380 PF03061 Thioesterase superfamily CAB88_25390 PF02632 BioY family CAB88_25395 PF00483 Nucleotidyl transferase CAB88_25400 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II CAB88_25400 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain CAB88_25400 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I CAB88_25400 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III CAB88_25405 PF10372 Bacterial membrane-spanning protein N-terminus CAB88_25405 PF02457 DisA bacterial checkpoint controller nucleotide-binding CAB88_25420 PF00892 EamA-like transporter family CAB88_25425 PF01040 UbiA prenyltransferase family CAB88_25430 PF00883 Cytosol aminopeptidase family, catalytic domain CAB88_25430 PF02789 Cytosol aminopeptidase family, N-terminal domain CAB88_25435 PF06725 3D domain CAB88_25445 PF13344 Haloacid dehalogenase-like hydrolase CAB88_25445 PF00293 NUDIX domain CAB88_25450 PF07992 Pyridine nucleotide-disulphide oxidoreductase CAB88_25455 PF07992 Pyridine nucleotide-disulphide oxidoreductase CAB88_25465 PF06445 GyrI-like small molecule binding domain CAB88_25480 PF04463 Protein of unknown function (DUF523) CAB88_25530 PF01510 N-acetylmuramoyl-L-alanine amidase CAB88_25530 PF12123 N-acetylmuramoyl-l-alanine amidase CAB88_25535 PF05105 Bacteriophage holin family CAB88_25540 PF10779 Haemolysin XhlA CAB88_25680 PF04542 Sigma-70 region 2 CAB88_25680 PF04545 Sigma-70, region 4 CAB88_25680 PF04539 Sigma-70 region 3 CAB88_25705 PF03374 Phage antirepressor protein KilAC domain CAB88_25705 PF09669 Phage regulatory protein Rha (Phage_pRha) CAB88_25725 PF01381 Helix-turn-helix CAB88_25780 PF01521 Iron-sulphur cluster biosynthesis CAB88_25785 PF01678 Diaminopimelate epimerase CAB88_25790 PF07293 Protein of unknown function (DUF1450) CAB88_25795 PF07992 Pyridine nucleotide-disulphide oxidoreductase CAB88_25805 PF00005 ABC transporter CAB88_25805 PF00664 ABC transporter transmembrane region CAB88_25805 PF03412 Peptidase C39 family CAB88_25810 PF03649 Uncharacterised protein family (UPF0014) CAB88_25815 PF03831 PhnA domain CAB88_25815 PF08274 PhnA Zinc-Ribbon CAB88_25840 PF07315 Protein of unknown function (DUF1462) CAB88_25845 PF01106 NifU-like domain CAB88_25865 PF04608 Phosphatidylglycerophosphatase A CAB88_25885 PF11202 Phosphoribosyl transferase (PRTase) CAB88_25885 PF15608 PELOTA RNA binding domain CAB88_25895 PF02525 Flavodoxin-like fold CAB88_25900 PF13344 Haloacid dehalogenase-like hydrolase CAB88_25910 PF01934 Protein of unknown function DUF86 CAB88_25915 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded CAB88_25940 PF06265 Protein of unknown function (DUF1027) CAB88_25945 PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) CAB88_25950 PF13411 MerR HTH family regulatory protein CAB88_25950 PF07739 TipAS antibiotic-recognition domain CAB88_25955 PF10086 YhfC intramembrane metalloprotease CAB88_25975 PF04055 Radical SAM superfamily CAB88_25975 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family CAB88_25980 PF01551 Peptidase family M23 CAB88_25985 PF09560 Sporulation protein YunB (Spo_YunB) CAB88_25990 PF08827 Domain of unknown function (DUF1805) CAB88_25995 PF02872 5'-nucleotidase, C-terminal domain CAB88_26000 PF01458 Uncharacterized protein family (UPF0051) CAB88_26005 PF01592 NifU-like N terminal domain CAB88_26010 PF00266 Aminotransferase class-V CAB88_26015 PF01458 Uncharacterized protein family (UPF0051) CAB88_26020 PF00005 ABC transporter CAB88_26025 PF03180 NLPA lipoprotein CAB88_26030 PF03180 NLPA lipoprotein CAB88_26035 PF00528 Binding-protein-dependent transport system inner membrane component CAB88_26040 PF00005 ABC transporter CAB88_26040 PF09383 NIL domain CAB88_26050 PF00085 Thioredoxin CAB88_26055 PF01751 Toprim domain CAB88_26060 PF01597 Glycine cleavage H-protein CAB88_26065 PF03960 ArsC family CAB88_26105 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain CAB88_26105 PF00056 lactate/malate dehydrogenase, NAD binding domain CAB88_26125 PF13305 Tetracyclin repressor-like, C-terminal domain CAB88_26125 PF00440 Bacterial regulatory proteins, tetR family CAB88_26130 PF00753 Metallo-beta-lactamase superfamily CAB88_26135 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CAB88_26135 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CAB88_26135 PF02770 Acyl-CoA dehydrogenase, middle domain CAB88_26140 PF02803 Thiolase, C-terminal domain CAB88_26140 PF00108 Thiolase, N-terminal domain CAB88_26145 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain CAB88_26145 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain CAB88_26145 PF00378 Enoyl-CoA hydratase/isomerase CAB88_26150 PF14115 YuzL-like protein CAB88_26155 PF07943 Penicillin-binding protein 5, C-terminal domain CAB88_26155 PF00768 D-alanyl-D-alanine carboxypeptidase CAB88_26160 PF01619 Proline dehydrogenase CAB88_26165 PF10835 Protein of unknown function (DUF2573) CAB88_26170 PF01910 Thiamine-binding protein CAB88_26175 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CAB88_26175 PF02743 Cache domain CAB88_26175 PF00672 HAMP domain CAB88_26190 PF07690 Major Facilitator Superfamily CAB88_26195 PF13520 Amino acid permease CAB88_26210 PF02096 60Kd inner membrane protein CAB88_26220 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) CAB88_26220 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 CAB88_26260 PF09335 SNARE associated Golgi protein CAB88_26270 PF17969 L,D-transpeptidase C-terminal domain CAB88_26270 PF03734 L,D-transpeptidase catalytic domain CAB88_26275 PF00072 Response regulator receiver domain CAB88_26275 PF00486 Transcriptional regulatory protein, C terminal CAB88_26280 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CAB88_26280 PF00512 His Kinase A (phospho-acceptor) domain CAB88_26280 PF00989 PAS fold CAB88_26280 PF16736 Single Cache-like CAB88_26295 PF09334 tRNA synthetases class I (M) CAB88_26295 PF08264 Anticodon-binding domain of tRNA CAB88_26305 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CAB88_26305 PF02743 Cache domain CAB88_26305 PF00672 HAMP domain CAB88_26310 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CAB88_26310 PF00672 HAMP domain CAB88_26310 PF02743 Cache domain CAB88_26315 PF01883 Iron-sulfur cluster assembly protein CAB88_26320 PF07504 Fungalysin/Thermolysin Propeptide Motif CAB88_26320 PF03413 Peptidase propeptide and YPEB domain CAB88_26320 PF02868 Thermolysin metallopeptidase, alpha-helical domain CAB88_26320 PF01447 Thermolysin metallopeptidase, catalytic domain CAB88_26325 PF17954 Quercetinase C-terminal cupin domain CAB88_26325 PF02678 Pirin CAB88_26330 PF01047 MarR family CAB88_26340 PF09335 SNARE associated Golgi protein CAB88_26345 PF00999 Sodium/hydrogen exchanger family CAB88_26350 PF02080 TrkA-C domain CAB88_26360 PF01235 Sodium:alanine symporter family CAB88_26365 PF00210 Ferritin-like domain CAB88_26375 PF05163 DinB family CAB88_26385 PF03641 Possible lysine decarboxylase CAB88_26395 PF00210 Ferritin-like domain CAB88_26400 PF07786 Protein of unknown function (DUF1624) CAB88_26400 PF04235 Protein of unknown function (DUF418) CAB88_26405 PF01773 Na+ dependent nucleoside transporter N-terminus CAB88_26405 PF07662 Na+ dependent nucleoside transporter C-terminus CAB88_26410 PF07662 Na+ dependent nucleoside transporter C-terminus CAB88_26410 PF01773 Na+ dependent nucleoside transporter N-terminus CAB88_26415 PF01235 Sodium:alanine symporter family CAB88_26420 PF01235 Sodium:alanine symporter family CAB88_26425 PF13460 NAD(P)H-binding CAB88_26445 PF00248 Aldo/keto reductase family CAB88_26450 PF07690 Major Facilitator Superfamily CAB88_26455 PF01638 HxlR-like helix-turn-helix CAB88_26460 PF07849 Protein of unknown function (DUF1641) CAB88_26465 PF07992 Pyridine nucleotide-disulphide oxidoreductase CAB88_26470 PF01479 S4 domain CAB88_26470 PF00579 tRNA synthetases class I (W and Y) CAB88_26475 PF01565 FAD binding domain CAB88_26475 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain CAB88_26500 PF02537 CrcB-like protein, Camphor Resistance (CrcB) CAB88_26505 PF02537 CrcB-like protein, Camphor Resistance (CrcB) CAB88_26520 PF13302 Acetyltransferase (GNAT) domain CAB88_26525 PF06146 Phosphate-starvation-inducible E CAB88_26535 PF00857 Isochorismatase family CAB88_26560 PF17440 Thiol-activated cytolysin beta sandwich domain CAB88_26560 PF01289 Thiol-activated cytolysin CAB88_26565 PF00005 ABC transporter CAB88_26570 PF01032 FecCD transport family CAB88_26575 PF01032 FecCD transport family CAB88_26585 PF00072 Response regulator receiver domain CAB88_26585 PF00486 Transcriptional regulatory protein, C terminal CAB88_26600 PF01668 SmpB protein CAB88_26605 PF00575 S1 RNA binding domain CAB88_26605 PF00773 RNB domain CAB88_26605 PF08206 Ribonuclease B OB domain CAB88_26605 PF17876 Cold shock domain CAB88_26610 PF12146 Serine aminopeptidase, S33 CAB88_26615 PF03840 Preprotein translocase SecG subunit CAB88_26620 PF04172 LrgB-like family CAB88_26625 PF03788 LrgA family CAB88_26630 PF01156 Inosine-uridine preferring nucleoside hydrolase CAB88_26635 PF03952 Enolase, N-terminal domain CAB88_26635 PF00113 Enolase, C-terminal TIM barrel domain CAB88_26640 PF01676 Metalloenzyme superfamily CAB88_26640 PF06415 BPG-independent PGAM N-terminus (iPGM_N) CAB88_26645 PF00121 Triosephosphate isomerase CAB88_26650 PF00162 Phosphoglycerate kinase CAB88_26655 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain CAB88_26655 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain CAB88_26660 PF04198 Putative sugar-binding domain CAB88_26670 PF00309 Sigma-54 factor, Activator interacting domain (AID) CAB88_26670 PF04963 Sigma-54 factor, core binding domain CAB88_26670 PF04552 Sigma-54, DNA binding domain CAB88_26680 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CAB88_26680 PF07730 Histidine kinase CAB88_26685 PF00196 Bacterial regulatory proteins, luxR family CAB88_26685 PF00072 Response regulator receiver domain CAB88_26705 PF03862 SpoVAC/SpoVAEB sporulation membrane protein CAB88_26710 PF07451 Stage V sporulation protein AD (SpoVAD) CAB88_26715 PF03862 SpoVAC/SpoVAEB sporulation membrane protein CAB88_26725 PF04239 Protein of unknown function (DUF421) CAB88_26730 PF00574 Clp protease CAB88_26735 PF00381 PTS HPr component phosphorylation site CAB88_26740 PF10298 WhiA N-terminal LAGLIDADG-like domain CAB88_26740 PF14527 WhiA LAGLIDADG-like domain CAB88_26740 PF02650 WhiA C-terminal HTH domain CAB88_26745 PF01933 Uncharacterised protein family UPF0052 CAB88_26750 PF03668 P-loop ATPase protein family CAB88_26755 PF00293 NUDIX domain CAB88_26765 PF07992 Pyridine nucleotide-disulphide oxidoreductase CAB88_26775 PF14602 Hexapeptide repeat of succinyl-transferase CAB88_26780 PF13419 Haloacid dehalogenase-like hydrolase CAB88_26785 PF01790 Prolipoprotein diacylglyceryl transferase CAB88_26790 PF07475 HPr Serine kinase C-terminal domain CAB88_26790 PF02603 HPr Serine kinase N terminus CAB88_26795 PF04020 Mycobacterial 4 TMS phage holin, superfamily IV CAB88_26805 PF00005 ABC transporter CAB88_26805 PF17760 UvrA interaction domain CAB88_26805 PF17755 UvrA DNA-binding domain CAB88_26810 PF04851 Type III restriction enzyme, res subunit CAB88_26810 PF17757 UvrB interaction domain CAB88_26810 PF12344 Ultra-violet resistance protein B CAB88_26810 PF00271 Helicase conserved C-terminal domain CAB88_26810 PF02151 UvrB/uvrC motif CAB88_26825 PF13411 MerR HTH family regulatory protein CAB88_26825 PF07739 TipAS antibiotic-recognition domain CAB88_26840 PF03601 Conserved hypothetical protein 698 CAB88_26845 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CAB88_26845 PF03466 LysR substrate binding domain CAB88_26850 PF00376 MerR family regulatory protein CAB88_26850 PF09278 MerR, DNA binding CAB88_26855 PF03358 NADPH-dependent FMN reductase CAB88_26860 PF12848 ABC transporter CAB88_26860 PF16326 ABC transporter C-terminal domain CAB88_26860 PF00005 ABC transporter CAB88_26865 PF01906 Putative heavy-metal-binding CAB88_26870 PF00664 ABC transporter transmembrane region CAB88_26870 PF00005 ABC transporter CAB88_26880 PF17820 PDZ domain CAB88_26885 PF01471 Putative peptidoglycan binding domain CAB88_26885 PF03572 Peptidase family S41 CAB88_26885 PF17820 PDZ domain CAB88_26890 PF02687 FtsX-like permease family CAB88_26890 PF18075 FtsX extracellular domain CAB88_26895 PF00005 ABC transporter CAB88_26900 PF13442 Cytochrome C oxidase, cbb3-type, subunit III CAB88_26910 PF00472 RF-1 domain CAB88_26910 PF03462 PCRF domain CAB88_26920 PF07516 SecA Wing and Scaffold domain CAB88_26920 PF01043 SecA preprotein cross-linking domain CAB88_26920 PF07517 SecA DEAD-like domain CAB88_26920 PF02810 SEC-C motif CAB88_26920 PF00271 Helicase conserved C-terminal domain CAB88_26925 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein CAB88_26925 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus CAB88_26930 PF00313 'Cold-shock' DNA-binding domain CAB88_26940 PF00271 Helicase conserved C-terminal domain CAB88_26940 PF04851 Type III restriction enzyme, res subunit CAB88_26945 PF00877 NlpC/P60 family CAB88_26945 PF01476 LysM domain CAB88_26950 PF01638 HxlR-like helix-turn-helix CAB88_26960 PF02645 Uncharacterised protein, DegV family COG1307 CAB88_26965 PF01205 Uncharacterized protein family UPF0029 CAB88_26965 PF09186 Domain of unknown function (DUF1949) CAB88_26970 PF03816 Cell envelope-related transcriptional attenuator domain CAB88_26975 PF02350 UDP-N-acetylglucosamine 2-epimerase CAB88_26980 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain CAB88_26980 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain CAB88_26980 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain CAB88_26985 PF00953 Glycosyl transferase family 4 CAB88_26995 PF00158 Sigma-54 interaction domain CAB88_26995 PF00874 PRD domain CAB88_26995 PF03610 PTS system fructose IIA component CAB88_27005 PF02417 Chromate transporter CAB88_27010 PF04794 YdjC-like protein CAB88_27015 PF02056 Family 4 glycosyl hydrolase CAB88_27015 PF11975 Family 4 glycosyl hydrolase C-terminal domain CAB88_27020 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit CAB88_27025 PF02378 Phosphotransferase system, EIIC CAB88_27030 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CAB88_27040 PF02675 S-adenosylmethionine decarboxylase CAB88_27045 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit CAB88_27050 PF02378 Phosphotransferase system, EIIC CAB88_27055 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CAB88_27060 PF00375 Sodium:dicarboxylate symporter family CAB88_27080 PF03466 LysR substrate binding domain CAB88_27080 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CAB88_27095 PF01654 Cytochrome bd terminal oxidase subunit I CAB88_27100 PF02322 Cytochrome bd terminal oxidase subunit II CAB88_27105 PF02040 Arsenical pump membrane protein CAB88_27110 PF13667 ThiC-associated domain CAB88_27110 PF01964 Radical SAM ThiC family CAB88_27140 PF02652 L-lactate permease CAB88_27150 PF09988 Uncharacterized metal-binding protein (DUF2227) CAB88_27165 PF00884 Sulfatase CAB88_27175 PF01063 Amino-transferase class IV CAB88_27180 PF00877 NlpC/P60 family CAB88_27180 PF01476 LysM domain CAB88_27185 PF01773 Na+ dependent nucleoside transporter N-terminus CAB88_27185 PF07662 Na+ dependent nucleoside transporter C-terminus CAB88_27205 PF02028 BCCT, betaine/carnitine/choline family transporter CAB88_27215 PF06725 3D domain CAB88_27215 PF01476 LysM domain CAB88_27240 PF04434 SWIM zinc finger CAB88_27245 PF12419 SNF2 Helicase protein CAB88_27245 PF00271 Helicase conserved C-terminal domain CAB88_27245 PF00176 SNF2 family N-terminal domain CAB88_27255 PF02371 Transposase IS116/IS110/IS902 family CAB88_27255 PF01548 Transposase CAB88_27285 PF04542 Sigma-70 region 2 CAB88_27285 PF04545 Sigma-70, region 4 CAB88_27290 PF04893 Yip1 domain CAB88_27295 PF12704 MacB-like periplasmic core domain CAB88_27295 PF02687 FtsX-like permease family CAB88_27300 PF00005 ABC transporter CAB88_27320 PF07690 Major Facilitator Superfamily CAB88_27335 PF16736 Single Cache-like CAB88_27335 PF00989 PAS fold CAB88_27335 PF00512 His Kinase A (phospho-acceptor) domain CAB88_27335 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CAB88_27340 PF00072 Response regulator receiver domain CAB88_27340 PF00486 Transcriptional regulatory protein, C terminal CAB88_27345 PF01238 Phosphomannose isomerase type I CAB88_27350 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CAB88_27350 PF02378 Phosphotransferase system, EIIC CAB88_27350 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CAB88_27355 PF08279 HTH domain CAB88_27355 PF05043 Mga helix-turn-helix domain CAB88_27355 PF00874 PRD domain CAB88_27355 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CAB88_27360 PF16363 GDP-mannose 4,6 dehydratase CAB88_27370 PF03816 Cell envelope-related transcriptional attenuator domain CAB88_27375 PF01238 Phosphomannose isomerase type I CAB88_27380 PF01050 Mannose-6-phosphate isomerase CAB88_27380 PF00483 Nucleotidyl transferase CAB88_27390 PF00534 Glycosyl transferases group 1 CAB88_27405 PF13439 Glycosyltransferase Family 4 CAB88_27405 PF00534 Glycosyl transferases group 1 CAB88_27410 PF12464 Maltose acetyltransferase CAB88_27410 PF00132 Bacterial transferase hexapeptide (six repeats) CAB88_27420 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain CAB88_27420 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain CAB88_27420 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain CAB88_27425 PF02397 Bacterial sugar transferase CAB88_27430 PF00483 Nucleotidyl transferase CAB88_27440 PF13614 AAA domain CAB88_27445 PF13807 G-rich domain on putative tyrosine kinase CAB88_27445 PF02706 Chain length determinant protein CAB88_27450 PF13614 AAA domain CAB88_27455 PF07977 FabA-like domain CAB88_27465 PF12116 Stage III sporulation protein D CAB88_27480 PF01551 Peptidase family M23 CAB88_27490 PF00005 ABC transporter CAB88_27495 PF04397 LytTr DNA-binding domain CAB88_27495 PF00072 Response regulator receiver domain CAB88_27500 PF08486 Stage II sporulation protein CAB88_27505 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) CAB88_27515 PF06612 Protein of unknown function (DUF1146) CAB88_27520 PF00361 Proton-conducting membrane transporter CAB88_27525 PF00361 Proton-conducting membrane transporter CAB88_27530 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus CAB88_27530 PF01010 NADH-dehyrogenase subunit F, TMs, (complex I) C-terminus CAB88_27530 PF00361 Proton-conducting membrane transporter CAB88_27535 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L CAB88_27540 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 CAB88_27550 PF00146 NADH dehydrogenase CAB88_27555 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit CAB88_27560 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit CAB88_27565 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit CAB88_27570 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 CAB88_27575 PF00990 Diguanylate cyclase, GGDEF domain CAB88_27575 PF00563 EAL domain CAB88_27575 PF03707 Bacterial signalling protein N terminal repeat CAB88_27590 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain CAB88_27590 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain CAB88_27595 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CAB88_27595 PF02874 ATP synthase alpha/beta family, beta-barrel domain CAB88_27600 PF00231 ATP synthase CAB88_27605 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CAB88_27605 PF02874 ATP synthase alpha/beta family, beta-barrel domain CAB88_27605 PF00306 ATP synthase alpha/beta chain, C terminal domain CAB88_27610 PF00213 ATP synthase delta (OSCP) subunit CAB88_27615 PF00430 ATP synthase B/B' CF(0) CAB88_27620 PF00137 ATP synthase subunit C CAB88_27625 PF00119 ATP synthase A chain CAB88_27630 PF03899 ATP synthase I chain CAB88_27650 PF00464 Serine hydroxymethyltransferase CAB88_27660 PF04260 Protein of unknown function (DUF436) CAB88_27665 PF02502 Ribose/Galactose Isomerase CAB88_27670 PF01451 Low molecular weight phosphotyrosine protein phosphatase CAB88_27680 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 CAB88_27685 PF07681 DoxX CAB88_27690 PF01613 Flavin reductase like domain CAB88_27705 PF02659 Putative manganese efflux pump CAB88_27710 PF01300 Telomere recombination CAB88_27710 PF03481 Putative GTP-binding controlling metal-binding CAB88_27720 PF09551 Stage II sporulation protein R (spore_II_R) CAB88_27725 PF13847 Methyltransferase domain CAB88_27725 PF17827 PrmC N-terminal domain CAB88_27730 PF00472 RF-1 domain CAB88_27730 PF03462 PCRF domain CAB88_27735 PF00265 Thymidine kinase CAB88_27740 PF01197 Ribosomal protein L31 CAB88_27750 PF07497 Rho termination factor, RNA-binding domain CAB88_27750 PF07498 Rho termination factor, N-terminal domain CAB88_27750 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CAB88_27755 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded CAB88_27765 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) CAB88_27770 PF01116 Fructose-bisphosphate aldolase class-II CAB88_27775 PF00072 Response regulator receiver domain CAB88_27780 PF10740 Domain of unknown function (DUF2529) CAB88_27785 PF00117 Glutamine amidotransferase class-I CAB88_27785 PF06418 CTP synthase N-terminus CAB88_27790 PF05066 HB1, ASXL, restriction endonuclease HTH domain CAB88_27800 PF02770 Acyl-CoA dehydrogenase, middle domain CAB88_27800 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CAB88_27800 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CAB88_27805 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CAB88_27805 PF02770 Acyl-CoA dehydrogenase, middle domain CAB88_27805 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CAB88_27810 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain CAB88_27810 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain CAB88_27815 PF00108 Thiolase, N-terminal domain CAB88_27815 PF02803 Thiolase, C-terminal domain CAB88_27820 PF13183 4Fe-4S dicluster domain CAB88_27820 PF02754 Cysteine-rich domain CAB88_27825 PF13091 PLD-like domain CAB88_27830 PF03851 UV-endonuclease UvdE CAB88_27835 PF00990 Diguanylate cyclase, GGDEF domain CAB88_27835 PF00563 EAL domain CAB88_27835 PF03707 Bacterial signalling protein N terminal repeat CAB88_27850 PF02868 Thermolysin metallopeptidase, alpha-helical domain CAB88_27850 PF07504 Fungalysin/Thermolysin Propeptide Motif CAB88_27850 PF01447 Thermolysin metallopeptidase, catalytic domain CAB88_27850 PF03413 Peptidase propeptide and YPEB domain CAB88_27855 PF00196 Bacterial regulatory proteins, luxR family CAB88_27855 PF00072 Response regulator receiver domain CAB88_27860 PF07730 Histidine kinase CAB88_27860 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CAB88_27870 PF00005 ABC transporter CAB88_27875 PF00557 Metallopeptidase family M24 CAB88_27885 PF04389 Peptidase family M28 CAB88_27885 PF02225 PA domain CAB88_27905 PF04542 Sigma-70 region 2 CAB88_27905 PF08281 Sigma-70, region 4 CAB88_27915 PF03485 Arginyl tRNA synthetase N terminal domain CAB88_27915 PF00750 tRNA synthetases class I (R) CAB88_27915 PF05746 DALR anticodon binding domain CAB88_27920 PF09148 Domain of unknown function (DUF1934) CAB88_27925 PF17676 LD-carboxypeptidase C-terminal domain CAB88_27925 PF02016 LD-carboxypeptidase N-terminal domain CAB88_27945 PF00491 Arginase family CAB88_27950 PF17284 Spermidine synthase tetramerisation domain CAB88_27955 PF07690 Major Facilitator Superfamily CAB88_27960 PF13411 MerR HTH family regulatory protein CAB88_27965 PF03009 Glycerophosphoryl diester phosphodiesterase family CAB88_27970 PF00905 Penicillin binding protein transpeptidase domain CAB88_27970 PF00912 Transglycosylase CAB88_27975 PF08741 YwhD family CAB88_27980 PF02163 Peptidase family M50 CAB88_27985 PF01361 Tautomerase enzyme CAB88_27990 PF01966 HD domain CAB88_27995 PF01497 Periplasmic binding protein CAB88_28000 PF00005 ABC transporter CAB88_28005 PF01032 FecCD transport family CAB88_28010 PF01032 FecCD transport family CAB88_28015 PF07293 Protein of unknown function (DUF1450) CAB88_28025 PF03099 Biotin/lipoate A/B protein ligase family CAB88_28030 PF01515 Phosphate acetyl/butaryl transferase CAB88_28040 PF07943 Penicillin-binding protein 5, C-terminal domain CAB88_28040 PF00768 D-alanyl-D-alanine carboxypeptidase CAB88_28045 PF07486 Cell Wall Hydrolase CAB88_28050 PF09671 Spore coat protein (Spore_GerQ) CAB88_28055 PF04241 Protein of unknown function (DUF423) CAB88_28065 PF02254 TrkA-N domain CAB88_28065 PF07885 Ion channel CAB88_28070 PF00860 Permease family CAB88_28080 PF12823 Domain of unknown function (DUF3817) CAB88_28085 PF03167 Uracil DNA glycosylase superfamily CAB88_28090 PF12679 ABC-2 family transporter protein CAB88_28095 PF00005 ABC transporter CAB88_28100 PF13472 GDSL-like Lipase/Acylhydrolase family CAB88_28105 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family CAB88_28105 PF00356 Bacterial regulatory proteins, lacI family CAB88_28115 PF00742 Homoserine dehydrogenase CAB88_28115 PF01842 ACT domain CAB88_28115 PF03447 Homoserine dehydrogenase, NAD binding domain CAB88_28120 PF04204 Homoserine O-succinyltransferase CAB88_28125 PF01053 Cys/Met metabolism PLP-dependent enzyme CAB88_28135 PF13419 Haloacid dehalogenase-like hydrolase CAB88_28140 PF00027 Cyclic nucleotide-binding domain CAB88_28145 PF02525 Flavodoxin-like fold CAB88_28150 PF00196 Bacterial regulatory proteins, luxR family CAB88_28150 PF00072 Response regulator receiver domain CAB88_28155 PF07730 Histidine kinase CAB88_28155 PF13185 GAF domain CAB88_28160 PF08543 Phosphomethylpyrimidine kinase CAB88_28165 PF00990 Diguanylate cyclase, GGDEF domain CAB88_28165 PF07694 5TMR of 5TMR-LYT CAB88_28170 PF04328 Selenoprotein, putative CAB88_28175 PF13722 5TM C-terminal transporter carbon starvation CstA CAB88_28175 PF02554 Carbon starvation protein CstA CAB88_28180 PF00072 Response regulator receiver domain CAB88_28180 PF04397 LytTr DNA-binding domain CAB88_28185 PF07690 Major Facilitator Superfamily CAB88_28195 PF03808 Glycosyl transferase WecB/TagA/CpsF family CAB88_28200 PF13439 Glycosyltransferase Family 4 CAB88_28200 PF00534 Glycosyl transferases group 1 CAB88_28210 PF03458 UPF0126 domain CAB88_28215 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CAB88_28225 PF03061 Thioesterase superfamily CAB88_28230 PF00535 Glycosyl transferase family 2 CAB88_28240 PF00535 Glycosyl transferase family 2 CAB88_28250 PF09586 Bacterial membrane protein YfhO CAB88_28255 PF00535 Glycosyl transferase family 2 CAB88_28265 PF08361 MAATS-type transcriptional repressor, C-terminal region CAB88_28265 PF00440 Bacterial regulatory proteins, tetR family CAB88_28270 PF12848 ABC transporter CAB88_28270 PF00005 ABC transporter CAB88_28275 PF00440 Bacterial regulatory proteins, tetR family CAB88_28280 PF00873 AcrB/AcrD/AcrF family CAB88_28285 PF01625 Peptide methionine sulfoxide reductase CAB88_28285 PF01641 SelR domain CAB88_28290 PF01594 AI-2E family transporter CAB88_28295 PF04172 LrgB-like family CAB88_28300 PF03788 LrgA family CAB88_28305 PF00072 Response regulator receiver domain CAB88_28305 PF04397 LytTr DNA-binding domain CAB88_28310 PF07694 5TMR of 5TMR-LYT CAB88_28310 PF06580 Histidine kinase CAB88_28310 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CAB88_28310 PF13492 GAF domain CAB88_28315 PF07690 Major Facilitator Superfamily CAB88_28320 PF02028 BCCT, betaine/carnitine/choline family transporter CAB88_28325 PF02898 Nitric oxide synthase, oxygenase domain CAB88_28335 PF02777 Iron/manganese superoxide dismutases, C-terminal domain CAB88_28335 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain CAB88_28345 PF02293 AmiS/UreI family transporter CAB88_28355 PF16363 GDP-mannose 4,6 dehydratase CAB88_28360 PF03006 Haemolysin-III related CAB88_28370 PF00270 DEAD/DEAH box helicase CAB88_28370 PF03880 DbpA RNA binding domain CAB88_28370 PF00271 Helicase conserved C-terminal domain CAB88_28375 PF00478 IMP dehydrogenase / GMP reductase domain CAB88_28380 PF01432 Peptidase family M3 CAB88_28380 PF08439 Oligopeptidase F CAB88_28390 PF13188 PAS domain CAB88_28390 PF13426 PAS domain CAB88_28390 PF00512 His Kinase A (phospho-acceptor) domain CAB88_28390 PF00989 PAS fold CAB88_28390 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CAB88_28395 PF02590 Predicted SPOUT methyltransferase CAB88_28405 PF13180 PDZ domain CAB88_28410 PF00753 Metallo-beta-lactamase superfamily CAB88_28415 PF09648 YycH protein CAB88_28425 PF00672 HAMP domain CAB88_28425 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CAB88_28425 PF00512 His Kinase A (phospho-acceptor) domain CAB88_28425 PF13426 PAS domain CAB88_28430 PF00486 Transcriptional regulatory protein, C terminal CAB88_28430 PF00072 Response regulator receiver domain CAB88_28455 PF00709 Adenylosuccinate synthetase CAB88_28460 PF03796 DnaB-like helicase C terminal domain CAB88_28460 PF00772 DnaB-like helicase N terminal domain CAB88_28465 PF01281 Ribosomal protein L9, N-terminal domain CAB88_28465 PF03948 Ribosomal protein L9, C-terminal domain CAB88_28470 PF01368 DHH family CAB88_28470 PF02272 DHHA1 domain CAB88_28475 PF09991 Predicted membrane protein (DUF2232) CAB88_28480 PF01084 Ribosomal protein S18 CAB88_28485 PF00436 Single-strand binding protein family CAB88_28490 PF01250 Ribosomal protein S6 CAB88_28495 PF01926 50S ribosome-binding GTPase CAB88_28495 PF06071 Protein of unknown function (DUF933) CAB88_28500 PF06107 Bacterial protein of unknown function (DUF951) CAB88_28505 PF00924 Mechanosensitive ion channel CAB88_28510 PF06866 Protein of unknown function (DUF1256) CAB88_28515 PF02195 ParB-like nuclease domain CAB88_28515 PF17762 HTH domain found in ParB protein CAB88_28520 PF13614 AAA domain CAB88_28525 PF02195 ParB-like nuclease domain CAB88_28525 PF17762 HTH domain found in ParB protein CAB88_28530 PF02527 rRNA small subunit methyltransferase G CAB88_28535 PF13932 GidA associated domain CAB88_28535 PF01134 Glucose inhibited division protein A CAB88_28540 PF12631 MnmE helical domain CAB88_28540 PF10396 GTP-binding protein TrmE N-terminus CAB88_28540 PF01926 50S ribosome-binding GTPase CAB88_28545 PF14804 Jag N-terminus CAB88_28545 PF01424 R3H domain CAB88_28550 PF02096 60Kd inner membrane protein CAB88_28555 PF00825 Ribonuclease P CAB88_28560 PF00468 Ribosomal protein L34 CAB88_28565 PF08299 Bacterial dnaA protein helix-turn-helix CAB88_28565 PF00308 Bacterial dnaA protein CAB88_28565 PF11638 DnaA N-terminal domain CAB88_28570 PF02768 DNA polymerase III beta subunit, C-terminal domain CAB88_28570 PF02767 DNA polymerase III beta subunit, central domain CAB88_28570 PF00712 DNA polymerase III beta subunit, N-terminal domain CAB88_28580 PF02463 RecF/RecN/SMC N terminal domain CAB88_28585 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CAB88_28585 PF01751 Toprim domain CAB88_28585 PF00986 DNA gyrase B subunit, carboxyl terminus CAB88_28585 PF00204 DNA gyrase B CAB88_28590 PF00521 DNA gyrase/topoisomerase IV, subunit A CAB88_28590 PF03989 DNA gyrase C-terminal domain, beta-propeller CAB88_28620 PF14175 YaaC-like Protein CAB88_28625 PF00571 CBS domain CAB88_28625 PF00478 IMP dehydrogenase / GMP reductase domain CAB88_28630 PF07943 Penicillin-binding protein 5, C-terminal domain CAB88_28630 PF00768 D-alanyl-D-alanine carboxypeptidase CAB88_28635 PF01680 SOR/SNZ family CAB88_28640 PF01174 SNO glutamine amidotransferase family CAB88_28645 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CAB88_28645 PF02403 Seryl-tRNA synthetase N-terminal domain CAB88_28660 PF01712 Deoxynucleoside kinase CAB88_28665 PF01712 Deoxynucleoside kinase CAB88_28670 PF00857 Isochorismatase family CAB88_28680 PF14437 MafB19-like deaminase CAB88_28690 PF12169 DNA polymerase III subunits gamma and tau domain III CAB88_28695 PF02575 YbaB/EbfC DNA-binding family CAB88_28700 PF02132 RecR protein CAB88_28700 PF13662 Toprim domain CAB88_28705 PF10704 Protein of unknown function (DUF2508) CAB88_28715 PF07441 SigmaK-factor processing regulatory protein BofA CAB88_28750 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain CAB88_28750 PF01276 Orn/Lys/Arg decarboxylase, major domain CAB88_28755 PF02223 Thymidylate kinase CAB88_28760 PF09115 DNA polymerase III, delta subunit, C terminal CAB88_28765 PF04468 PSP1 C-terminal conserved region CAB88_28770 PF06156 Initiation control protein YabA CAB88_28775 PF05175 Methyltransferase small domain CAB88_28780 PF01541 GIY-YIG catalytic domain CAB88_28785 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CAB88_28790 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin CAB88_28790 PF18277 AbrB C-terminal domain CAB88_28795 PF01588 Putative tRNA binding domain CAB88_28795 PF09334 tRNA synthetases class I (M) CAB88_28795 PF08264 Anticodon-binding domain of tRNA CAB88_28800 PF01026 TatD related DNase CAB88_28805 PF13331 Domain of unknown function (DUF4093) CAB88_28805 PF13662 Toprim domain CAB88_28810 PF00398 Ribosomal RNA adenine dimethylase CAB88_28815 PF05582 YabG peptidase U57 CAB88_28820 PF06257 Biofilm formation stimulator VEG CAB88_28825 PF00269 Small, acid-soluble spore proteins, alpha/beta type CAB88_28830 PF08544 GHMP kinases C terminal CAB88_28830 PF00288 GHMP kinases N terminal domain CAB88_28835 PF09182 Bacterial purine repressor, N-terminal CAB88_28835 PF00156 Phosphoribosyl transferase domain CAB88_28845 PF01042 Endoribonuclease L-PSP CAB88_28850 PF04026 SpoVG CAB88_28855 PF00483 Nucleotidyl transferase CAB88_28855 PF00132 Bacterial transferase hexapeptide (six repeats) CAB88_28860 PF14572 Phosphoribosyl synthetase-associated domain CAB88_28860 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase CAB88_28865 PF01195 Peptidyl-tRNA hydrolase CAB88_28875 PF00271 Helicase conserved C-terminal domain CAB88_28875 PF17757 UvrB interaction domain CAB88_28875 PF03461 TRCF domain CAB88_28875 PF00270 DEAD/DEAH box helicase CAB88_28875 PF02559 CarD-like/TRCF domain CAB88_28880 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin CAB88_28880 PF15714 Stage V sporulation protein T C-terminal, transcription factor CAB88_28885 PF01943 Polysaccharide biosynthesis protein CAB88_28885 PF14667 Polysaccharide biosynthesis C-terminal domain CAB88_28890 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CAB88_28890 PF03819 MazG nucleotide pyrophosphohydrolase domain CAB88_28895 PF01479 S4 domain CAB88_28900 PF07873 YabP family CAB88_28905 PF09578 Spore cortex protein YabQ (Spore_YabQ) CAB88_28915 PF00575 S1 RNA binding domain CAB88_28930 PF07228 Stage II sporulation protein E (SpoIIE) CAB88_28935 PF11734 TilS substrate C-terminal domain CAB88_28935 PF01171 PP-loop family CAB88_28935 PF09179 TilS substrate binding domain CAB88_28945 PF17862 AAA+ lid domain CAB88_28945 PF00004 ATPase family associated with various cellular activities (AAA) CAB88_28945 PF01434 Peptidase family M41 CAB88_28945 PF06480 FtsH Extracellular CAB88_28950 PF03309 Type III pantothenate kinase CAB88_28955 PF01430 Hsp33 protein CAB88_28960 PF00291 Pyridoxal-phosphate dependent enzyme CAB88_28965 PF04715 Anthranilate synthase component I, N terminal region CAB88_28965 PF00425 chorismate binding enzyme CAB88_28970 PF00117 Glutamine amidotransferase class-I CAB88_28975 PF01063 Amino-transferase class IV CAB88_28980 PF00809 Pterin binding enzyme CAB88_28985 PF02152 Dihydroneopterin aldolase CAB88_28990 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) CAB88_28995 PF01381 Helix-turn-helix CAB88_29000 PF01207 Dihydrouridine synthase (Dus) CAB88_29005 PF01336 OB-fold nucleic acid binding domain CAB88_29005 PF00152 tRNA synthetases class II (D, K and N) CAB88_29115 PF00005 ABC transporter CAB88_29120 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) CAB88_29175 PF17854 FtsK alpha domain CAB88_29175 PF09397 Ftsk gamma domain CAB88_29175 PF01580 FtsK/SpoIIIE family CAB88_29180 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) CAB88_29190 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) CAB88_29190 PF01348 Type II intron maturase CAB88_29225 PF01695 IstB-like ATP binding protein CAB88_29230 PF00665 Integrase core domain CAB88_29350 PF03838 Recombination protein U CAB88_29440 PF03838 Recombination protein U CAB88_29480 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) CAB88_29500 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) CAB88_29520 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) CAB88_29530 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) CAB88_29530 PF01348 Type II intron maturase CAB88_29550 PF10087 Uncharacterized protein conserved in bacteria (DUF2325) CAB88_29570 PF04235 Protein of unknown function (DUF418) CAB88_29610 PF00440 Bacterial regulatory proteins, tetR family CAB88_29615 PF11495 Archaeal transcriptional regulator TrmB CAB88_29615 PF01978 Sugar-specific transcriptional regulator TrmB CAB88_29630 PF13520 Amino acid permease CAB88_29640 PF00701 Dihydrodipicolinate synthetase family CAB88_29645 PF04299 Putative FMN-binding domain CAB88_29650 PF00155 Aminotransferase class I and II CAB88_29650 PF00392 Bacterial regulatory proteins, gntR family CAB88_29660 PF01047 MarR family CAB88_29665 PF00583 Acetyltransferase (GNAT) family CAB88_29685 PF03466 LysR substrate binding domain CAB88_29685 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CAB88_29695 PF01609 Transposase DDE domain CAB88_29700 PF13537 Glutamine amidotransferase domain CAB88_29700 PF00733 Asparagine synthase CAB88_29705 PF11798 IMS family HHH motif CAB88_29705 PF00817 impB/mucB/samB family CAB88_29705 PF11799 impB/mucB/samB family C-terminal domain CAB88_29730 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase CAB88_29735 PF00144 Beta-lactamase CAB88_29740 PF13411 MerR HTH family regulatory protein CAB88_29745 PF10026 Predicted Zn-dependent protease (DUF2268) CAB88_29760 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) CAB88_29770 PF13454 FAD-NAD(P)-binding CAB88_29775 PF00892 EamA-like transporter family CAB88_29780 PF01037 Lrp/AsnC ligand binding domain CAB88_29785 PF00144 Beta-lactamase CAB88_29825 PF00216 Bacterial DNA-binding protein CAB88_29830 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin CAB88_29830 PF18277 AbrB C-terminal domain CAB88_29855 PF02371 Transposase IS116/IS110/IS902 family CAB88_29855 PF01548 Transposase CAB88_29870 PF12323 Helix-turn-helix domain CAB88_29870 PF01385 Probable transposase CAB88_29870 PF07282 Putative transposase DNA-binding domain CAB88_29875 PF00892 EamA-like transporter family CAB88_29885 PF07729 FCD domain CAB88_29885 PF00392 Bacterial regulatory proteins, gntR family CAB88_29890 PF00892 EamA-like transporter family CAB88_29900 PF07690 Major Facilitator Superfamily CAB88_29905 PF01804 Penicillin amidase CAB88_29910 PF00668 Condensation domain CAB88_29910 PF00550 Phosphopantetheine attachment site CAB88_29910 PF13193 AMP-binding enzyme C-terminal domain CAB88_29910 PF00501 AMP-binding enzyme CAB88_29910 PF00550 Phosphopantetheine attachment site CAB88_29910 PF00668 Condensation domain CAB88_29910 PF00501 AMP-binding enzyme CAB88_29910 PF13193 AMP-binding enzyme C-terminal domain CAB88_29915 PF00550 Phosphopantetheine attachment site CAB88_29915 PF13193 AMP-binding enzyme C-terminal domain CAB88_29915 PF00668 Condensation domain CAB88_29915 PF00501 AMP-binding enzyme CAB88_29920 PF00550 Phosphopantetheine attachment site CAB88_29920 PF00668 Condensation domain CAB88_29920 PF13193 AMP-binding enzyme C-terminal domain CAB88_29920 PF00501 AMP-binding enzyme CAB88_29925 PF00975 Thioesterase domain CAB88_29950 PF00291 Pyridoxal-phosphate dependent enzyme CAB88_29955 PF02423 Ornithine cyclodeaminase/mu-crystallin family CAB88_29970 PF00216 Bacterial DNA-binding protein CAB88_29985 PF18277 AbrB C-terminal domain CAB88_29985 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin CAB88_29990 PF01636 Phosphotransferase enzyme family CAB88_29995 PF00534 Glycosyl transferases group 1 CAB88_29995 PF13439 Glycosyltransferase Family 4 CAB88_30015 PF13439 Glycosyltransferase Family 4 CAB88_30015 PF00534 Glycosyl transferases group 1 CAB88_30020 PF01370 NAD dependent epimerase/dehydratase family CAB88_30025 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain CAB88_30025 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain CAB88_30025 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain CAB88_30030 PF00483 Nucleotidyl transferase CAB88_30035 PF00854 POT family CAB88_30045 PF00392 Bacterial regulatory proteins, gntR family CAB88_30045 PF00155 Aminotransferase class I and II CAB88_30075 PF01385 Probable transposase CAB88_30075 PF07282 Putative transposase DNA-binding domain CAB88_30075 PF12323 Helix-turn-helix domain CAB88_30085 PF01734 Patatin-like phospholipase CAB88_30085 PF00027 Cyclic nucleotide-binding domain CAB88_30090 PF11954 Domain of unknown function (DUF3471) CAB88_30090 PF00144 Beta-lactamase CAB88_30110 PF00082 Subtilase family CAB88_30120 PF01695 IstB-like ATP binding protein CAB88_30125 PF00665 Integrase core domain CAB88_30145 PF00082 Subtilase family CAB88_30145 PF01483 Proprotein convertase P-domain CAB88_30160 PF00082 Subtilase family CAB88_30180 PF08450 SMP-30/Gluconolactonase/LRE-like region CAB88_30185 PF00665 Integrase core domain CAB88_30190 PF01695 IstB-like ATP binding protein CAB88_30195 PF00264 Common central domain of tyrosinase CAB88_30200 PF00440 Bacterial regulatory proteins, tetR family CAB88_30200 PF16859 Tetracyclin repressor-like, C-terminal domain CAB88_30205 PF07690 Major Facilitator Superfamily CAB88_30210 PF01842 ACT domain CAB88_30210 PF03315 Serine dehydratase beta chain CAB88_30215 PF03313 Serine dehydratase alpha chain CAB88_30230 PF01022 Bacterial regulatory protein, arsR family CAB88_30235 PF00672 HAMP domain CAB88_30235 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CAB88_30235 PF12729 Four helix bundle sensory module for signal transduction CAB88_30250 PF00797 N-acetyltransferase CAB88_30255 PF18665 Tetracyclin repressor-like, C-terminal domain CAB88_30255 PF00440 Bacterial regulatory proteins, tetR family CAB88_30260 PF08453 Peptidase family M9 N-terminal CAB88_30260 PF01752 Collagenase CAB88_30260 PF18496 Collagenase G catalytic helper subdomain CAB88_30265 PF00313 'Cold-shock' DNA-binding domain CAB88_30280 PF02559 CarD-like/TRCF domain CAB88_30295 PF10842 Protein of unknown function (DUF2642) CAB88_30305 PF13536 Putative multidrug resistance efflux transporter CAB88_30310 PF00392 Bacterial regulatory proteins, gntR family CAB88_30310 PF07729 FCD domain CAB88_30320 PF17209 Hfq protein CAB88_30325 PF00144 Beta-lactamase CAB88_30325 PF11954 Domain of unknown function (DUF3471) CAB88_30330 PF01098 Cell cycle protein CAB88_30340 PF00571 CBS domain CAB88_30340 PF01769 Divalent cation transporter CAB88_30340 PF03448 MgtE intracellular N domain CAB88_30350 PF13539 D-alanyl-D-alanine carboxypeptidase CAB88_30355 PF01471 Putative peptidoglycan binding domain CAB88_30355 PF01520 N-acetylmuramoyl-L-alanine amidase CAB88_30375 PF10042 Uncharacterized conserved protein (DUF2278) CAB88_30380 PF00082 Subtilase family CAB88_30395 PF16485 Protealysin propeptide CAB88_30395 PF01447 Thermolysin metallopeptidase, catalytic domain CAB88_30395 PF02868 Thermolysin metallopeptidase, alpha-helical domain CAB88_30400 PF00589 Phage integrase family CAB88_30400 PF13495 Phage integrase, N-terminal SAM-like domain CAB88_30440 PF00512 His Kinase A (phospho-acceptor) domain CAB88_30440 PF00989 PAS fold CAB88_30440 PF00672 HAMP domain CAB88_30440 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CAB88_30445 PF00072 Response regulator receiver domain CAB88_30445 PF00486 Transcriptional regulatory protein, C terminal CAB88_30450 PF07859 alpha/beta hydrolase fold CAB88_30460 PF07690 Major Facilitator Superfamily CAB88_30465 PF00440 Bacterial regulatory proteins, tetR family CAB88_30490 PF07681 DoxX CAB88_30495 PF13193 AMP-binding enzyme C-terminal domain CAB88_30495 PF00501 AMP-binding enzyme CAB88_30515 PF01833 IPT/TIG domain CAB88_30515 PF00686 Starch binding domain CAB88_30515 PF00128 Alpha amylase, catalytic domain CAB88_30520 PF07690 Major Facilitator Superfamily CAB88_30535 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CAB88_30540 PF00072 Response regulator receiver domain CAB88_30540 PF00486 Transcriptional regulatory protein, C terminal CAB88_30550 PF00005 ABC transporter CAB88_30570 PF00581 Rhodanese-like domain CAB88_30575 PF07992 Pyridine nucleotide-disulphide oxidoreductase CAB88_30590 PF12996 DUF based on E. rectale Gene description (DUF3880) CAB88_30620 PF03102 NeuB family CAB88_30620 PF08666 SAF domain CAB88_30635 PF02348 Cytidylyltransferase CAB88_30640 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family CAB88_30645 PF16363 GDP-mannose 4,6 dehydratase CAB88_30650 PF02719 Polysaccharide biosynthesis protein CAB88_30655 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase CAB88_30660 PF00535 Glycosyl transferase family 2 CAB88_30665 PF00535 Glycosyl transferase family 2 CAB88_30675 PF18801 response regulator aspartate phosphatase H, N terminal CAB88_30685 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CAB88_30685 PF00672 HAMP domain CAB88_30685 PF02743 Cache domain CAB88_30705 PF01695 IstB-like ATP binding protein CAB88_30710 PF00665 Integrase core domain CAB88_30735 PF00293 NUDIX domain CAB88_30740 PF01022 Bacterial regulatory protein, arsR family CAB88_30750 PF00589 Phage integrase family CAB88_30750 PF13495 Phage integrase, N-terminal SAM-like domain CAB88_30785 PF01925 Sulfite exporter TauE/SafE CAB88_30820 PF00589 Phage integrase family CAB88_30825 PF16870 2-oxoglutarate dehydrogenase C-terminal CAB88_30825 PF00676 Dehydrogenase E1 component CAB88_30825 PF02779 Transketolase, pyrimidine binding domain CAB88_30830 PF00939 Sodium:sulfate symporter transmembrane region CAB88_30835 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CAB88_30835 PF07992 Pyridine nucleotide-disulphide oxidoreductase CAB88_30840 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CAB88_30840 PF07992 Pyridine nucleotide-disulphide oxidoreductase CAB88_30860 PF00072 Response regulator receiver domain CAB88_30865 PF00989 PAS fold CAB88_30865 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CAB88_30865 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain CAB88_30865 PF17203 Single cache domain 3 CAB88_30885 PF17475 Clostridial binary toxin B/anthrax toxin PA domain 2 CAB88_30885 PF17476 Clostridial binary toxin B/anthrax toxin PA domain 3 CAB88_30885 PF07691 PA14 domain CAB88_30885 PF03495 Clostridial binary toxin B/anthrax toxin PA Ca-binding domain CAB88_30890 PF18801 response regulator aspartate phosphatase H, N terminal CAB88_30895 PF01022 Bacterial regulatory protein, arsR family CAB88_30900 PF02600 Disulfide bond formation protein DsbB CAB88_30910 PF00565 Staphylococcal nuclease homologue CAB88_30915 PF00565 Staphylococcal nuclease homologue CAB88_30925 PF02677 Epoxyqueuosine reductase QueH CAB88_30930 PF08378 Nuclease-related domain CAB88_30980 PF16485 Protealysin propeptide CAB88_30980 PF01447 Thermolysin metallopeptidase, catalytic domain CAB88_30980 PF02868 Thermolysin metallopeptidase, alpha-helical domain CAB88_31005 PF00817 impB/mucB/samB family CAB88_31005 PF11799 impB/mucB/samB family C-terminal domain CAB88_31005 PF11798 IMS family HHH motif CAB88_31010 PF00589 Phage integrase family CAB88_31010 PF02899 Phage integrase, N-terminal SAM-like domain CAB88_31015 PF00589 Phage integrase family CAB88_31060 PF00563 EAL domain CAB88_31060 PF00990 Diguanylate cyclase, GGDEF domain CAB88_31060 PF03707 Bacterial signalling protein N terminal repeat CAB88_31085 PF00665 Integrase core domain CAB88_31090 PF01695 IstB-like ATP binding protein CAB88_31095 PF18801 response regulator aspartate phosphatase H, N terminal CAB88_31120 PF00005 ABC transporter CAB88_31125 PF00005 ABC transporter CAB88_31125 PF00664 ABC transporter transmembrane region CAB88_31130 PF05147 Lanthionine synthetase C-like protein CAB88_31130 PF13575 Domain of unknown function (DUF4135) CAB88_31145 PF02195 ParB-like nuclease domain CAB88_31150 PF02423 Ornithine cyclodeaminase/mu-crystallin family CAB88_31155 PF00291 Pyridoxal-phosphate dependent enzyme CAB88_31160 PF07282 Putative transposase DNA-binding domain CAB88_31160 PF12323 Helix-turn-helix domain CAB88_31160 PF01385 Probable transposase CAB88_31170 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain CAB88_31170 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain CAB88_31175 PF07690 Major Facilitator Superfamily CAB88_31180 PF02894 Oxidoreductase family, C-terminal alpha/beta domain CAB88_31180 PF01408 Oxidoreductase family, NAD-binding Rossmann fold CAB88_31185 PF05116 Sucrose-6F-phosphate phosphohydrolase CAB88_31190 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family CAB88_31195 PF00356 Bacterial regulatory proteins, lacI family CAB88_31200 PF01648 4'-phosphopantetheinyl transferase superfamily CAB88_31205 PF00550 Phosphopantetheine attachment site CAB88_31205 PF00501 AMP-binding enzyme CAB88_31205 PF00975 Thioesterase domain CAB88_31205 PF13193 AMP-binding enzyme C-terminal domain CAB88_31205 PF00668 Condensation domain CAB88_31215 PF00668 Condensation domain CAB88_31215 PF00501 AMP-binding enzyme CAB88_31215 PF00550 Phosphopantetheine attachment site CAB88_31215 PF13193 AMP-binding enzyme C-terminal domain CAB88_31225 PF00664 ABC transporter transmembrane region CAB88_31225 PF00005 ABC transporter CAB88_31230 PF00296 Luciferase-like monooxygenase CAB88_31235 PF14765 Polyketide synthase dehydratase CAB88_31235 PF08659 KR domain CAB88_31235 PF02801 Beta-ketoacyl synthase, C-terminal domain CAB88_31235 PF00109 Beta-ketoacyl synthase, N-terminal domain CAB88_31235 PF16197 Ketoacyl-synthetase C-terminal extension CAB88_31235 PF00668 Condensation domain CAB88_31235 PF13193 AMP-binding enzyme C-terminal domain CAB88_31235 PF00501 AMP-binding enzyme CAB88_31235 PF00550 Phosphopantetheine attachment site CAB88_31240 PF00550 Phosphopantetheine attachment site CAB88_31240 PF13193 AMP-binding enzyme C-terminal domain CAB88_31240 PF00501 AMP-binding enzyme CAB88_31240 PF00975 Thioesterase domain CAB88_31240 PF00668 Condensation domain CAB88_31245 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CAB88_31245 PF02770 Acyl-CoA dehydrogenase, middle domain CAB88_31245 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CAB88_31250 PF00550 Phosphopantetheine attachment site CAB88_31255 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain CAB88_31255 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain CAB88_31260 PF00698 Acyl transferase domain CAB88_31270 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CAB88_31270 PF02770 Acyl-CoA dehydrogenase, middle domain CAB88_31270 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CAB88_31280 PF00550 Phosphopantetheine attachment site CAB88_31280 PF00668 Condensation domain CAB88_31280 PF00501 AMP-binding enzyme CAB88_31280 PF13193 AMP-binding enzyme C-terminal domain CAB88_31285 PF13193 AMP-binding enzyme C-terminal domain CAB88_31285 PF00668 Condensation domain CAB88_31285 PF00501 AMP-binding enzyme CAB88_31285 PF00550 Phosphopantetheine attachment site CAB88_31285 PF00975 Thioesterase domain CAB88_31290 PF08659 KR domain CAB88_31290 PF00501 AMP-binding enzyme CAB88_31290 PF00668 Condensation domain CAB88_31290 PF14765 Polyketide synthase dehydratase CAB88_31290 PF13193 AMP-binding enzyme C-terminal domain CAB88_31290 PF00550 Phosphopantetheine attachment site CAB88_31290 PF00109 Beta-ketoacyl synthase, N-terminal domain CAB88_31290 PF00550 Phosphopantetheine attachment site CAB88_31290 PF14765 Polyketide synthase dehydratase CAB88_31290 PF08659 KR domain CAB88_31290 PF02801 Beta-ketoacyl synthase, C-terminal domain CAB88_31290 PF02801 Beta-ketoacyl synthase, C-terminal domain CAB88_31290 PF13193 AMP-binding enzyme C-terminal domain CAB88_31290 PF00501 AMP-binding enzyme CAB88_31290 PF00109 Beta-ketoacyl synthase, N-terminal domain CAB88_31290 PF16197 Ketoacyl-synthetase C-terminal extension CAB88_31290 PF00668 Condensation domain CAB88_31290 PF16197 Ketoacyl-synthetase C-terminal extension CAB88_31300 PF01385 Probable transposase CAB88_31300 PF07282 Putative transposase DNA-binding domain CAB88_31300 PF12323 Helix-turn-helix domain CAB88_31310 PF00877 NlpC/P60 family CAB88_31310 PF01476 LysM domain CAB88_31315 PF01476 LysM domain CAB88_31315 PF06725 3D domain CAB88_31325 PF01609 Transposase DDE domain CAB88_31340 PF07282 Putative transposase DNA-binding domain CAB88_31340 PF12323 Helix-turn-helix domain CAB88_31340 PF01385 Probable transposase CAB88_31355 PF01510 N-acetylmuramoyl-L-alanine amidase CAB88_31370 PF01476 LysM domain CAB88_31370 PF01510 N-acetylmuramoyl-L-alanine amidase CAB88_31370 PF01471 Putative peptidoglycan binding domain CAB88_31375 PF04225 Opacity-associated protein A LysM-like domain CAB88_31375 PF01551 Peptidase family M23 CAB88_31410 PF10042 Uncharacterized conserved protein (DUF2278) CAB88_31415 PF02225 PA domain CAB88_31415 PF04389 Peptidase family M28 CAB88_31440 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase CAB88_31440 PF13288 DXP reductoisomerase C-terminal domain CAB88_31440 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain CAB88_31465 PF06414 Zeta toxin CAB88_31470 PF00293 NUDIX domain CAB88_31475 PF00453 Ribosomal protein L20 CAB88_31480 PF03413 Peptidase propeptide and YPEB domain CAB88_31480 PF07504 Fungalysin/Thermolysin Propeptide Motif CAB88_31480 PF01447 Thermolysin metallopeptidase, catalytic domain CAB88_31480 PF02868 Thermolysin metallopeptidase, alpha-helical domain CAB88_31485 PF18801 response regulator aspartate phosphatase H, N terminal CAB88_31505 PF00269 Small, acid-soluble spore proteins, alpha/beta type CAB88_31510 PF00672 HAMP domain CAB88_31510 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CAB88_31535 PF00005 ABC transporter CAB88_31535 PF00664 ABC transporter transmembrane region CAB88_31550 PF14028 Lantibiotic biosynthesis dehydratase C-term CAB88_31550 PF04738 Lantibiotic dehydratase, N terminus CAB88_31625 PF17841 BID domain of Bartonella effector protein (Bep) CAB88_31625 PF03389 MobA/MobL family CAB88_31625 PF01443 Viral (Superfamily 1) RNA helicase CAB88_31635 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) CAB88_31650 PF01131 DNA topoisomerase CAB88_31650 PF01751 Toprim domain CAB88_31705 PF01551 Peptidase family M23 CAB88_31705 PF08525 Opacity-associated protein A N-terminal motif CAB88_31705 PF01476 LysM domain CAB88_31750 PF18801 response regulator aspartate phosphatase H, N terminal CAB88_31750 PF17874 MalT-like TPR region CAB88_31915 PF02899 Phage integrase, N-terminal SAM-like domain CAB88_31915 PF00589 Phage integrase family CAB88_31920 PF13700 Domain of unknown function (DUF4158) CAB88_31920 PF01526 Tn3 transposase DDE domain CAB88_31940 PF02796 Helix-turn-helix domain of resolvase CAB88_31940 PF00239 Resolvase, N terminal domain CAB88_31980 PF01609 Transposase DDE domain CAB88_31985 PF03945 delta endotoxin, N-terminal domain CAB88_31985 PF00555 delta endotoxin CAB88_31985 PF03944 delta endotoxin CAB88_31985 PF17997 Insecticidal delta-endotoxin CryIA(c) domain 5 CAB88_32000 PF00589 Phage integrase family CAB88_32005 PF02899 Phage integrase, N-terminal SAM-like domain CAB88_32005 PF00589 Phage integrase family CAB88_32010 PF00216 Bacterial DNA-binding protein CAB88_32030 PF12323 Helix-turn-helix domain CAB88_32030 PF01385 Probable transposase CAB88_32030 PF07282 Putative transposase DNA-binding domain CAB88_32060 PF00881 Nitroreductase family CAB88_32060 PF01996 F420-0:Gamma-glutamyl ligase CAB88_32070 PF08501 Shikimate dehydrogenase substrate binding domain CAB88_32070 PF01488 Shikimate / quinate 5-dehydrogenase CAB88_32070 PF18317 Shikimate 5'-dehydrogenase C-terminal domain CAB88_32080 PF01941 S-adenosylmethionine synthetase (AdoMet synthetase) CAB88_32100 PF00550 Phosphopantetheine attachment site CAB88_32100 PF00668 Condensation domain CAB88_32100 PF13193 AMP-binding enzyme C-terminal domain CAB88_32100 PF00501 AMP-binding enzyme CAB88_32105 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain CAB88_32105 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain CAB88_32105 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain CAB88_32110 PF00589 Phage integrase family CAB88_32110 PF02899 Phage integrase, N-terminal SAM-like domain CAB88_32120 PF00665 Integrase core domain CAB88_32125 PF01695 IstB-like ATP binding protein CAB88_32180 PF00877 NlpC/P60 family CAB88_32245 PF13700 Domain of unknown function (DUF4158) CAB88_32245 PF01526 Tn3 transposase DDE domain CAB88_32250 PF02899 Phage integrase, N-terminal SAM-like domain CAB88_32250 PF00589 Phage integrase family CAB88_32255 PF01609 Transposase DDE domain CAB88_32265 PF03838 Recombination protein U CAB88_32445 PF18801 response regulator aspartate phosphatase H, N terminal CAB88_32450 PF01510 N-acetylmuramoyl-L-alanine amidase CAB88_32470 PF13457 GW (Gly-Tryp) dipeptide domain CAB88_32470 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase CAB88_32480 PF01548 Transposase CAB88_32480 PF02371 Transposase IS116/IS110/IS902 family CAB88_32590 PF05065 Phage capsid family CAB88_32595 PF14550 Putative phage serine protease XkdF CAB88_32605 PF01609 Transposase DDE domain CAB88_32615 PF01609 Transposase DDE domain CAB88_32620 PF13700 Domain of unknown function (DUF4158) CAB88_32620 PF01526 Tn3 transposase DDE domain CAB88_32625 PF00589 Phage integrase family CAB88_32625 PF02899 Phage integrase, N-terminal SAM-like domain CAB88_32635 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) CAB88_32655 PF03838 Recombination protein U CAB88_32895 PF17841 BID domain of Bartonella effector protein (Bep) CAB88_32895 PF02661 Fic/DOC family CAB88_32920 PF00589 Phage integrase family CAB88_32920 PF02899 Phage integrase, N-terminal SAM-like domain CAB88_32925 PF13342 C-terminal repeat of topoisomerase CAB88_32925 PF01751 Toprim domain CAB88_32925 PF01131 DNA topoisomerase CAB88_32940 PF18801 response regulator aspartate phosphatase H, N terminal CAB88_32950 PF17209 Hfq protein CAB88_32995 PF01609 Transposase DDE domain CAB88_33010 PF01695 IstB-like ATP binding protein CAB88_33015 PF00665 Integrase core domain CAB88_33020 PF01609 Transposase DDE domain CAB88_33035 PF01510 N-acetylmuramoyl-L-alanine amidase CAB88_33035 PF01476 LysM domain CAB88_33035 PF01471 Putative peptidoglycan binding domain CAB88_33040 PF03945 delta endotoxin, N-terminal domain CAB88_33040 PF00555 delta endotoxin CAB88_33040 PF17997 Insecticidal delta-endotoxin CryIA(c) domain 5 CAB88_33040 PF03944 delta endotoxin CAB88_33050 PF01609 Transposase DDE domain CAB88_33055 PF00589 Phage integrase family CAB88_33055 PF02899 Phage integrase, N-terminal SAM-like domain CAB88_33060 PF13700 Domain of unknown function (DUF4158) CAB88_33060 PF01526 Tn3 transposase DDE domain CAB88_33075 PF01022 Bacterial regulatory protein, arsR family CAB88_33095 PF00072 Response regulator receiver domain CAB88_33095 PF00196 Bacterial regulatory proteins, luxR family CAB88_33145 PF01695 IstB-like ATP binding protein CAB88_33150 PF00665 Integrase core domain CAB88_33165 PF00589 Phage integrase family CAB88_33170 PF02899 Phage integrase, N-terminal SAM-like domain CAB88_33170 PF00589 Phage integrase family CAB88_33205 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) CAB88_33240 PF00877 NlpC/P60 family